Query 004248
Match_columns 766
No_of_seqs 949 out of 6005
Neff 8.6
Searched_HMMs 46136
Date Thu Mar 28 20:07:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004248.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/004248hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 2.9E-78 6.2E-83 745.6 52.5 198 523-748 682-880 (968)
2 KOG1187 Serine/threonine prote 100.0 1.9E-49 4.2E-54 428.6 20.4 216 521-750 62-282 (361)
3 KOG0595 Serine/threonine-prote 100.0 8.9E-46 1.9E-50 380.5 13.2 199 532-750 8-218 (429)
4 KOG0600 Cdc2-related protein k 100.0 3.7E-44 8E-49 376.4 11.9 213 533-764 116-337 (560)
5 KOG0581 Mitogen-activated prot 100.0 4.4E-43 9.5E-48 358.1 14.9 195 537-749 82-280 (364)
6 KOG0598 Ribosomal protein S6 k 100.0 3.4E-43 7.4E-48 358.9 12.4 198 533-750 24-229 (357)
7 KOG0593 Predicted protein kina 100.0 8.2E-43 1.8E-47 344.2 8.0 208 534-761 2-216 (396)
8 KOG0615 Serine/threonine prote 100.0 1.9E-42 4.2E-47 355.1 10.3 199 534-749 172-384 (475)
9 KOG0661 MAPK related serine/th 100.0 2.1E-43 4.7E-48 368.0 2.9 211 534-766 10-226 (538)
10 KOG0663 Protein kinase PITSLRE 100.0 2.3E-42 4.9E-47 345.4 8.9 213 532-763 74-294 (419)
11 KOG0192 Tyrosine kinase specif 100.0 2.1E-41 4.5E-46 363.4 16.9 198 539-751 46-251 (362)
12 KOG0659 Cdk activating kinase 100.0 6.7E-42 1.5E-46 332.7 11.5 208 534-761 2-216 (318)
13 KOG0591 NIMA (never in mitosis 100.0 7.1E-43 1.5E-47 341.4 3.0 202 535-749 20-231 (375)
14 KOG0575 Polo-like serine/threo 100.0 6.1E-41 1.3E-45 361.0 15.4 196 534-749 18-221 (592)
15 KOG0658 Glycogen synthase kina 100.0 9.8E-42 2.1E-46 347.4 6.1 210 535-763 25-242 (364)
16 KOG0616 cAMP-dependent protein 100.0 7.9E-41 1.7E-45 329.8 12.1 198 534-751 44-246 (355)
17 KOG0597 Serine-threonine prote 100.0 1E-39 2.3E-44 344.9 9.9 196 534-750 2-204 (808)
18 KOG0197 Tyrosine kinases [Sign 100.0 4E-39 8.6E-44 344.1 12.6 193 537-747 209-406 (468)
19 KOG0605 NDR and related serine 100.0 1.1E-38 2.4E-43 338.3 13.9 201 532-752 139-394 (550)
20 KOG0594 Protein kinase PCTAIRE 100.0 1E-38 2.3E-43 326.2 12.5 214 534-763 11-237 (323)
21 KOG0592 3-phosphoinositide-dep 100.0 8.4E-39 1.8E-43 338.7 11.9 198 531-748 70-289 (604)
22 KOG0660 Mitogen-activated prot 100.0 5.8E-39 1.3E-43 326.6 9.3 211 532-762 20-243 (359)
23 KOG0583 Serine/threonine prote 100.0 8.2E-38 1.8E-42 338.8 16.0 200 532-750 15-227 (370)
24 KOG1026 Nerve growth factor re 100.0 4.3E-38 9.2E-43 351.6 12.2 201 535-748 487-708 (774)
25 KOG0198 MEKK and related serin 100.0 7.7E-38 1.7E-42 325.8 12.5 197 535-748 18-224 (313)
26 KOG0578 p21-activated serine/t 100.0 8.1E-38 1.8E-42 334.4 12.6 195 534-749 273-472 (550)
27 KOG0580 Serine/threonine prote 100.0 2.9E-38 6.2E-43 303.3 6.4 200 533-750 21-226 (281)
28 KOG0694 Serine/threonine prote 100.0 1.5E-37 3.3E-42 338.3 12.7 194 533-747 367-569 (694)
29 KOG0582 Ste20-like serine/thre 100.0 5.8E-37 1.3E-41 317.7 14.5 201 533-749 25-235 (516)
30 KOG0588 Serine/threonine prote 100.0 4.9E-37 1.1E-41 331.4 12.8 199 534-751 12-217 (786)
31 KOG0611 Predicted serine/threo 100.0 2.7E-37 5.8E-42 314.7 9.8 197 535-750 54-257 (668)
32 KOG0585 Ca2+/calmodulin-depend 100.0 2.9E-37 6.3E-42 321.6 10.0 203 531-748 94-321 (576)
33 cd05628 STKc_NDR1 Catalytic do 100.0 1.9E-36 4.2E-41 332.5 15.8 197 534-750 1-240 (363)
34 PTZ00263 protein kinase A cata 100.0 2.8E-36 6.2E-41 326.6 15.5 196 534-749 18-218 (329)
35 cd05612 STKc_PRKX_like Catalyt 100.0 2E-36 4.2E-41 322.1 13.8 196 534-749 1-201 (291)
36 KOG0196 Tyrosine kinase, EPH ( 100.0 2.1E-37 4.5E-42 338.7 6.3 209 522-749 608-838 (996)
37 PTZ00426 cAMP-dependent protei 100.0 4E-36 8.7E-41 326.6 15.3 197 534-750 30-232 (340)
38 KOG0193 Serine/threonine prote 100.0 1.2E-36 2.6E-41 325.9 11.0 202 527-747 385-594 (678)
39 cd05626 STKc_LATS2 Catalytic d 100.0 5.8E-36 1.3E-40 330.9 15.9 197 535-751 2-253 (381)
40 cd05631 STKc_GRK4 Catalytic do 100.0 1.1E-35 2.3E-40 315.5 16.9 196 536-749 2-204 (285)
41 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 9.6E-36 2.1E-40 323.2 16.4 196 534-749 1-201 (333)
42 cd05599 STKc_NDR_like Catalyti 100.0 7.9E-36 1.7E-40 327.9 15.6 196 534-749 1-242 (364)
43 cd05571 STKc_PKB Catalytic dom 100.0 1.3E-35 2.9E-40 320.6 16.8 190 540-749 1-198 (323)
44 cd05629 STKc_NDR_like_fungal C 100.0 9.5E-36 2.1E-40 328.8 15.7 196 534-749 1-251 (377)
45 cd05625 STKc_LATS1 Catalytic d 100.0 1.2E-35 2.6E-40 328.6 16.5 196 535-750 2-252 (382)
46 KOG0667 Dual-specificity tyros 100.0 4.4E-36 9.5E-41 327.3 10.8 210 535-764 187-405 (586)
47 cd05102 PTKc_VEGFR3 Catalytic 100.0 1.7E-35 3.7E-40 321.9 15.4 205 533-749 6-280 (338)
48 cd05621 STKc_ROCK2 Catalytic d 100.0 1.3E-35 2.9E-40 326.1 14.5 201 531-749 40-250 (370)
49 cd05598 STKc_LATS Catalytic do 100.0 1.4E-35 3E-40 327.5 14.4 198 534-751 1-249 (376)
50 KOG3653 Transforming growth fa 100.0 4.5E-35 9.7E-40 305.7 16.5 198 535-746 211-424 (534)
51 cd05595 STKc_PKB_beta Catalyti 100.0 5.7E-35 1.2E-39 315.6 17.6 190 540-749 1-198 (323)
52 cd05585 STKc_YPK1_like Catalyt 100.0 4.3E-35 9.3E-40 315.1 16.2 188 542-749 1-196 (312)
53 cd05593 STKc_PKB_gamma Catalyt 100.0 6.9E-35 1.5E-39 315.6 17.5 190 540-749 1-198 (328)
54 cd05627 STKc_NDR2 Catalytic do 100.0 2.9E-35 6.2E-40 322.9 13.7 197 534-750 1-240 (360)
55 PHA02988 hypothetical protein; 100.0 9.9E-35 2.1E-39 307.7 17.0 206 523-750 14-226 (283)
56 KOG4721 Serine/threonine prote 100.0 6.3E-36 1.4E-40 315.9 7.7 182 539-747 129-312 (904)
57 PLN00113 leucine-rich repeat r 100.0 2.4E-34 5.1E-39 355.3 22.8 344 46-401 26-400 (968)
58 cd05596 STKc_ROCK Catalytic do 100.0 3.4E-35 7.4E-40 323.2 13.6 202 532-750 41-251 (370)
59 KOG0194 Protein tyrosine kinas 100.0 1.8E-35 4E-40 321.2 11.2 196 534-748 157-365 (474)
60 cd05622 STKc_ROCK1 Catalytic d 100.0 5.9E-35 1.3E-39 321.3 15.4 206 527-750 36-251 (371)
61 cd07871 STKc_PCTAIRE3 Catalyti 100.0 8.5E-35 1.9E-39 309.0 15.5 197 534-749 5-207 (288)
62 cd07869 STKc_PFTAIRE1 Catalyti 100.0 5.7E-35 1.2E-39 312.7 14.1 198 533-749 4-207 (303)
63 cd05597 STKc_DMPK_like Catalyt 100.0 1.2E-34 2.5E-39 314.3 16.1 202 534-749 1-211 (331)
64 cd06649 PKc_MEK2 Catalytic dom 100.0 1.8E-34 3.8E-39 312.9 17.5 196 534-748 5-204 (331)
65 cd05594 STKc_PKB_alpha Catalyt 100.0 9.9E-35 2.2E-39 314.1 15.2 190 540-749 1-199 (325)
66 cd05573 STKc_ROCK_NDR_like Cat 100.0 7.7E-35 1.7E-39 318.2 14.4 197 534-750 1-234 (350)
67 KOG2345 Serine/threonine prote 100.0 1.9E-35 4.2E-40 285.0 8.2 205 534-748 21-243 (302)
68 cd05584 STKc_p70S6K Catalytic 100.0 2.3E-34 5E-39 310.9 17.6 190 540-749 2-203 (323)
69 cd05624 STKc_MRCK_beta Catalyt 100.0 1.2E-34 2.7E-39 314.1 15.3 202 534-749 1-211 (331)
70 cd05616 STKc_cPKC_beta Catalyt 100.0 1.6E-34 3.4E-39 312.2 16.1 195 535-749 1-204 (323)
71 KOG0662 Cyclin-dependent kinas 100.0 2.2E-35 4.7E-40 270.8 7.6 210 535-763 3-219 (292)
72 KOG0589 Serine/threonine prote 100.0 3.9E-35 8.4E-40 312.8 10.4 201 534-751 4-211 (426)
73 cd05587 STKc_cPKC Catalytic do 100.0 2.3E-34 5.1E-39 311.0 16.6 195 535-749 1-204 (324)
74 cd05623 STKc_MRCK_alpha Cataly 100.0 1.9E-34 4.2E-39 312.7 15.8 202 534-749 1-211 (332)
75 KOG0201 Serine/threonine prote 100.0 1.3E-35 2.8E-40 307.8 6.1 194 535-748 14-213 (467)
76 cd05614 STKc_MSK2_N N-terminal 100.0 2.3E-34 5.1E-39 312.1 16.0 195 535-748 1-209 (332)
77 cd05601 STKc_CRIK Catalytic do 100.0 1.3E-34 2.9E-39 313.8 13.9 202 534-749 1-212 (330)
78 cd05588 STKc_aPKC Catalytic do 100.0 2.9E-34 6.2E-39 311.0 16.5 188 540-747 1-197 (329)
79 cd05618 STKc_aPKC_iota Catalyt 100.0 3.4E-34 7.5E-39 310.3 16.5 188 540-747 1-197 (329)
80 KOG1095 Protein tyrosine kinas 100.0 1.2E-34 2.7E-39 335.2 13.5 199 536-747 694-906 (1025)
81 cd05591 STKc_nPKC_epsilon Cata 100.0 3E-34 6.6E-39 309.7 15.7 190 540-749 1-199 (321)
82 cd05575 STKc_SGK Catalytic dom 100.0 4.3E-34 9.4E-39 308.8 16.8 190 540-749 1-199 (323)
83 KOG0577 Serine/threonine prote 100.0 2.5E-35 5.5E-40 312.5 6.8 195 536-748 28-227 (948)
84 cd05589 STKc_PKN Catalytic dom 100.0 4.1E-34 8.9E-39 309.1 16.5 193 536-749 1-204 (324)
85 cd05590 STKc_nPKC_eta Catalyti 100.0 3.4E-34 7.4E-39 309.2 15.4 190 540-749 1-199 (320)
86 cd05592 STKc_nPKC_theta_delta 100.0 4.2E-34 9.2E-39 307.8 16.1 189 540-748 1-198 (316)
87 cd05603 STKc_SGK2 Catalytic do 100.0 4.6E-34 1E-38 308.3 16.3 190 540-749 1-199 (321)
88 cd07848 STKc_CDKL5 Catalytic d 100.0 3.8E-34 8.2E-39 303.7 15.3 195 534-748 1-203 (287)
89 KOG0984 Mitogen-activated prot 100.0 2.8E-35 6.1E-40 276.2 5.6 217 533-761 45-267 (282)
90 cd05619 STKc_nPKC_theta Cataly 100.0 5.4E-34 1.2E-38 307.0 16.2 190 540-749 1-199 (316)
91 cd07859 STKc_TDY_MAPK_plant Ca 100.0 3.1E-34 6.7E-39 311.8 14.3 196 535-748 1-210 (338)
92 cd05615 STKc_cPKC_alpha Cataly 100.0 5E-34 1.1E-38 308.2 15.6 195 535-749 1-204 (323)
93 cd05620 STKc_nPKC_delta Cataly 100.0 6.3E-34 1.4E-38 306.5 16.3 190 540-749 1-199 (316)
94 cd06650 PKc_MEK1 Catalytic dom 100.0 7.4E-34 1.6E-38 308.2 16.7 197 534-749 5-205 (333)
95 cd05604 STKc_SGK3 Catalytic do 100.0 4.8E-34 1E-38 308.7 15.1 191 540-750 1-200 (325)
96 KOG1989 ARK protein kinase fam 100.0 1.6E-34 3.5E-39 324.8 11.7 203 535-749 38-261 (738)
97 PLN00034 mitogen-activated pro 100.0 5E-34 1.1E-38 312.2 15.1 195 535-748 75-275 (353)
98 cd05617 STKc_aPKC_zeta Catalyt 100.0 5.9E-34 1.3E-38 308.2 15.5 188 540-747 1-197 (327)
99 cd07862 STKc_CDK6 Catalytic do 100.0 1.1E-33 2.3E-38 300.7 17.0 198 534-749 1-212 (290)
100 PHA03212 serine/threonine kina 100.0 6.8E-34 1.5E-38 314.4 15.7 189 534-748 92-285 (391)
101 cd05582 STKc_RSK_N N-terminal 100.0 4.4E-34 9.5E-39 308.1 13.6 190 540-749 2-201 (318)
102 cd05605 STKc_GRK4_like Catalyt 100.0 1E-33 2.2E-38 300.3 16.1 196 535-748 1-203 (285)
103 cd05602 STKc_SGK1 Catalytic do 100.0 1.1E-33 2.4E-38 305.8 16.2 190 540-749 1-199 (325)
104 cd05608 STKc_GRK1 Catalytic do 100.0 8.9E-34 1.9E-38 299.9 15.0 191 542-748 1-199 (280)
105 KOG4250 TANK binding protein k 100.0 1.8E-34 4E-39 315.0 9.8 202 536-752 15-230 (732)
106 KOG1006 Mitogen-activated prot 100.0 5.1E-36 1.1E-40 291.1 -2.2 207 537-759 67-282 (361)
107 KOG0574 STE20-like serine/thre 100.0 1.1E-35 2.3E-40 292.6 -0.1 192 536-747 35-230 (502)
108 PTZ00267 NIMA-related protein 100.0 9.4E-34 2E-38 321.8 15.5 197 536-748 69-273 (478)
109 KOG0986 G protein-coupled rece 100.0 1.4E-34 3.1E-39 299.5 7.9 196 534-747 185-387 (591)
110 KOG0666 Cyclin C-dependent kin 100.0 1.7E-34 3.7E-39 285.9 8.0 201 534-748 24-242 (438)
111 KOG0607 MAP kinase-interacting 100.0 4.1E-34 8.9E-39 284.0 10.6 204 524-747 73-292 (463)
112 PTZ00284 protein kinase; Provi 100.0 7.7E-34 1.7E-38 322.2 13.8 203 528-749 123-348 (467)
113 KOG0599 Phosphorylase kinase g 100.0 1.3E-34 2.9E-39 281.8 6.3 199 534-747 17-229 (411)
114 cd05096 PTKc_DDR1 Catalytic do 100.0 2E-33 4.4E-38 300.8 16.0 202 534-748 5-244 (304)
115 PTZ00036 glycogen synthase kin 100.0 1.3E-33 2.8E-38 317.1 14.8 199 533-749 65-274 (440)
116 cd05106 PTKc_CSF-1R Catalytic 100.0 9.9E-34 2.1E-38 311.9 13.6 203 534-749 38-318 (374)
117 cd05114 PTKc_Tec_Rlk Catalytic 100.0 3E-33 6.6E-38 291.6 16.3 197 534-749 4-205 (256)
118 KOG0586 Serine/threonine prote 100.0 1.2E-33 2.6E-38 305.0 13.5 202 532-752 54-261 (596)
119 cd07878 STKc_p38beta_MAPK11 Ca 100.0 2.6E-33 5.7E-38 305.3 16.1 198 531-748 12-218 (343)
120 cd05570 STKc_PKC Catalytic dom 100.0 2.4E-33 5.1E-38 302.4 15.5 190 540-749 1-199 (318)
121 cd05064 PTKc_EphR_A10 Catalyti 100.0 2.7E-33 5.8E-38 293.9 15.3 197 534-749 5-212 (266)
122 cd07872 STKc_PCTAIRE2 Catalyti 100.0 2.5E-33 5.4E-38 300.9 15.3 198 534-750 6-209 (309)
123 cd07853 STKc_NLK Catalytic dom 100.0 2.4E-33 5.3E-38 309.1 15.4 196 535-749 1-208 (372)
124 cd05586 STKc_Sck1_like Catalyt 100.0 1.4E-33 3E-38 305.9 13.1 190 542-750 1-201 (330)
125 PRK13184 pknD serine/threonine 100.0 2.3E-33 5E-38 327.4 15.9 202 534-748 2-233 (932)
126 cd05108 PTKc_EGFR Catalytic do 100.0 4E-33 8.6E-38 300.3 16.6 195 534-748 7-214 (316)
127 cd05104 PTKc_Kit Catalytic dom 100.0 2.8E-33 6E-38 308.6 15.3 204 533-749 34-320 (375)
128 PTZ00283 serine/threonine prot 100.0 1.7E-33 3.7E-38 320.0 13.9 203 532-749 30-248 (496)
129 KOG0610 Putative serine/threon 100.0 2.5E-33 5.5E-38 288.6 13.7 197 535-749 78-338 (459)
130 cd05072 PTKc_Lyn Catalytic dom 100.0 4.7E-33 1E-37 290.9 15.7 197 534-748 6-207 (261)
131 cd05607 STKc_GRK7 Catalytic do 100.0 4E-33 8.6E-38 294.5 15.3 189 542-748 1-196 (277)
132 cd06637 STKc_TNIK Catalytic do 100.0 3E-33 6.6E-38 294.1 14.3 206 531-748 3-218 (272)
133 KOG1094 Discoidin domain recep 100.0 7.1E-34 1.5E-38 301.9 8.8 194 536-747 540-742 (807)
134 KOG4279 Serine/threonine prote 100.0 6.8E-34 1.5E-38 306.1 8.7 191 541-748 582-780 (1226)
135 cd07876 STKc_JNK2 Catalytic do 100.0 6.1E-33 1.3E-37 304.4 16.2 196 532-749 19-225 (359)
136 KOG0690 Serine/threonine prote 100.0 7.4E-34 1.6E-38 282.5 8.0 196 534-749 168-371 (516)
137 cd06646 STKc_MAP4K5 Catalytic 100.0 9E-33 2E-37 289.8 16.8 199 534-749 9-212 (267)
138 cd05068 PTKc_Frk_like Catalyti 100.0 1.2E-32 2.7E-37 287.8 17.7 199 533-749 5-208 (261)
139 KOG4717 Serine/threonine prote 100.0 1.7E-33 3.7E-38 294.4 10.9 200 534-751 18-224 (864)
140 KOG0032 Ca2+/calmodulin-depend 100.0 5.6E-33 1.2E-37 300.9 15.2 197 533-750 34-242 (382)
141 KOG0584 Serine/threonine prote 100.0 9.1E-34 2E-38 306.1 8.7 190 539-746 45-243 (632)
142 cd05632 STKc_GRK5 Catalytic do 100.0 1.1E-32 2.4E-37 292.4 16.7 196 536-749 2-204 (285)
143 KOG0033 Ca2+/calmodulin-depend 100.0 8.7E-35 1.9E-39 279.2 0.3 195 534-748 11-214 (355)
144 cd05630 STKc_GRK6 Catalytic do 100.0 9.7E-33 2.1E-37 292.8 15.9 195 536-748 2-203 (285)
145 cd06615 PKc_MEK Catalytic doma 100.0 1.4E-32 3E-37 295.0 17.1 197 534-749 1-201 (308)
146 cd05082 PTKc_Csk Catalytic dom 100.0 1.6E-32 3.4E-37 286.2 16.7 197 534-749 6-203 (256)
147 cd06639 STKc_myosinIIIB Cataly 100.0 1.1E-32 2.3E-37 293.3 15.3 216 524-749 12-236 (291)
148 cd05054 PTKc_VEGFR Catalytic d 100.0 8.6E-33 1.9E-37 300.2 14.7 203 534-748 7-278 (337)
149 KOG2052 Activin A type IB rece 100.0 1.1E-32 2.3E-37 285.9 14.2 216 533-762 210-452 (513)
150 cd05105 PTKc_PDGFR_alpha Catal 100.0 1.3E-32 2.8E-37 304.6 15.7 203 533-748 36-342 (400)
151 cd05052 PTKc_Abl Catalytic dom 100.0 1.8E-32 3.9E-37 287.0 16.0 197 535-749 7-209 (263)
152 PTZ00266 NIMA-related protein 100.0 7.2E-33 1.6E-37 324.4 14.0 208 532-749 11-246 (1021)
153 cd05059 PTKc_Tec_like Catalyti 100.0 1.7E-32 3.7E-37 286.0 15.4 196 535-749 5-205 (256)
154 cd07874 STKc_JNK3 Catalytic do 100.0 1.1E-32 2.3E-37 302.0 14.5 197 532-750 15-222 (355)
155 cd07863 STKc_CDK4 Catalytic do 100.0 2.1E-32 4.7E-37 290.3 16.3 196 535-748 1-209 (288)
156 cd06638 STKc_myosinIIIA Cataly 100.0 1.2E-32 2.7E-37 291.8 14.4 216 524-749 8-232 (286)
157 cd06619 PKc_MKK5 Catalytic dom 100.0 2.9E-32 6.3E-37 288.1 17.0 191 534-748 1-195 (279)
158 cd07875 STKc_JNK1 Catalytic do 100.0 1.3E-32 2.9E-37 302.3 14.8 196 532-749 22-228 (364)
159 cd05113 PTKc_Btk_Bmx Catalytic 100.0 1.6E-32 3.4E-37 286.4 14.6 197 534-749 4-205 (256)
160 cd07868 STKc_CDK8 Catalytic do 100.0 2.8E-32 6E-37 293.8 17.0 197 539-748 6-218 (317)
161 cd08529 STKc_FA2-like Catalyti 100.0 3.1E-32 6.8E-37 283.5 16.7 198 535-750 1-205 (256)
162 cd05071 PTKc_Src Catalytic dom 100.0 2.5E-32 5.5E-37 285.9 15.9 196 534-748 6-206 (262)
163 cd07873 STKc_PCTAIRE1 Catalyti 100.0 2.5E-32 5.5E-37 291.9 16.0 197 534-749 6-208 (301)
164 KOG0612 Rho-associated, coiled 100.0 1.1E-33 2.4E-38 320.8 5.4 208 527-749 68-284 (1317)
165 cd05111 PTK_HER3 Pseudokinase 100.0 3.4E-32 7.3E-37 287.7 16.2 196 534-749 7-215 (279)
166 cd05067 PTKc_Lck_Blk Catalytic 100.0 3.6E-32 7.9E-37 284.1 16.3 197 534-749 6-207 (260)
167 cd06654 STKc_PAK1 Catalytic do 100.0 3.3E-32 7.1E-37 290.4 16.0 196 534-750 20-220 (296)
168 cd06645 STKc_MAP4K3 Catalytic 100.0 2.2E-32 4.8E-37 286.8 14.4 199 534-749 9-212 (267)
169 cd05580 STKc_PKA Catalytic dom 100.0 4.7E-32 1E-36 288.2 17.1 197 534-750 1-202 (290)
170 cd06625 STKc_MEKK3_like Cataly 100.0 5.5E-32 1.2E-36 283.0 17.1 196 534-749 2-210 (263)
171 cd05090 PTKc_Ror1 Catalytic do 100.0 4.4E-32 9.5E-37 287.3 16.5 203 534-749 5-230 (283)
172 cd05048 PTKc_Ror Catalytic Dom 100.0 3.1E-32 6.7E-37 288.3 15.3 203 534-749 5-230 (283)
173 cd05049 PTKc_Trk Catalytic dom 100.0 4.2E-32 9.1E-37 286.7 16.2 203 534-749 5-228 (280)
174 cd06636 STKc_MAP4K4_6 Catalyti 100.0 3.3E-32 7.2E-37 288.0 15.3 214 524-749 6-229 (282)
175 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 4.4E-32 9.5E-37 283.5 15.6 196 534-748 6-206 (260)
176 cd05109 PTKc_HER2 Catalytic do 100.0 5.2E-32 1.1E-36 286.1 16.1 195 534-748 7-214 (279)
177 cd06643 STKc_SLK Catalytic dom 100.0 7.1E-32 1.5E-36 285.5 16.9 200 536-749 7-211 (282)
178 cd05062 PTKc_IGF-1R Catalytic 100.0 3.8E-32 8.1E-37 286.9 14.7 204 532-748 4-224 (277)
179 cd08228 STKc_Nek6 Catalytic do 100.0 6.7E-32 1.5E-36 283.1 16.4 200 534-749 2-209 (267)
180 cd05033 PTKc_EphR Catalytic do 100.0 1E-31 2.3E-36 281.7 17.7 197 534-749 4-212 (266)
181 cd05042 PTKc_Aatyk Catalytic d 100.0 4.3E-32 9.3E-37 285.1 14.6 202 540-749 1-213 (269)
182 cd06644 STKc_STK10_LOK Catalyt 100.0 9.2E-32 2E-36 286.2 17.4 201 534-748 12-217 (292)
183 PHA03207 serine/threonine kina 100.0 3.4E-32 7.4E-37 301.8 14.5 193 533-750 91-291 (392)
184 cd05093 PTKc_TrkB Catalytic do 100.0 6.7E-32 1.4E-36 286.8 16.0 204 534-750 5-227 (288)
185 KOG4278 Protein tyrosine kinas 100.0 8.2E-33 1.8E-37 294.4 8.9 203 527-747 260-468 (1157)
186 cd07867 STKc_CDC2L6 Catalytic 100.0 7.9E-32 1.7E-36 290.2 16.7 197 539-748 6-218 (317)
187 cd05036 PTKc_ALK_LTK Catalytic 100.0 4.9E-32 1.1E-36 286.1 14.8 204 533-749 5-225 (277)
188 cd06652 STKc_MEKK2 Catalytic d 100.0 8.7E-32 1.9E-36 282.1 16.6 196 534-748 2-211 (265)
189 cd05084 PTKc_Fes Catalytic dom 100.0 8E-32 1.7E-36 280.1 16.1 190 540-748 1-199 (252)
190 cd05039 PTKc_Csk_like Catalyti 100.0 9.7E-32 2.1E-36 280.1 16.7 197 534-749 6-203 (256)
191 KOG0608 Warts/lats-like serine 100.0 1.7E-32 3.7E-37 293.0 11.1 213 525-757 617-882 (1034)
192 cd08227 PK_STRAD_alpha Pseudok 100.0 6E-32 1.3E-36 292.7 15.7 195 538-748 2-212 (327)
193 cd05089 PTKc_Tie1 Catalytic do 100.0 9.8E-32 2.1E-36 286.8 16.9 204 534-750 2-223 (297)
194 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 1.1E-31 2.4E-36 282.1 17.0 202 540-749 1-213 (269)
195 cd05148 PTKc_Srm_Brk Catalytic 100.0 3.6E-32 7.8E-37 284.1 13.3 200 532-749 4-208 (261)
196 cd06624 STKc_ASK Catalytic dom 100.0 7.3E-32 1.6E-36 283.1 15.6 203 529-748 3-213 (268)
197 PHA03211 serine/threonine kina 100.0 4.6E-32 9.9E-37 303.8 14.9 191 534-749 169-365 (461)
198 cd05069 PTKc_Yes Catalytic dom 100.0 8.8E-32 1.9E-36 281.3 16.0 196 534-748 6-206 (260)
199 cd05088 PTKc_Tie2 Catalytic do 100.0 7.3E-32 1.6E-36 288.7 15.6 202 534-748 7-226 (303)
200 cd06611 STKc_SLK_like Catalyti 100.0 5.1E-32 1.1E-36 286.2 14.1 203 533-749 4-211 (280)
201 cd08223 STKc_Nek4 Catalytic do 100.0 1.4E-31 3E-36 278.9 17.0 199 535-750 1-206 (257)
202 cd05103 PTKc_VEGFR2 Catalytic 100.0 8.3E-32 1.8E-36 293.4 16.0 203 534-748 7-284 (343)
203 cd05035 PTKc_Axl_like Catalyti 100.0 1.8E-31 3.9E-36 280.5 17.9 200 536-748 1-218 (273)
204 cd07870 STKc_PFTAIRE2 Catalyti 100.0 8.5E-32 1.8E-36 286.3 15.6 200 532-750 3-208 (291)
205 KOG0579 Ste20-like serine/thre 100.0 2.4E-33 5.1E-38 299.0 3.5 198 536-747 34-236 (1187)
206 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 1.1E-31 2.4E-36 284.2 16.3 193 536-748 6-212 (283)
207 cd07861 STKc_CDK1_euk Catalyti 100.0 9.9E-32 2.1E-36 284.6 15.8 197 535-748 1-204 (285)
208 cd07847 STKc_CDKL1_4 Catalytic 100.0 1E-31 2.2E-36 284.5 16.0 196 534-748 1-203 (286)
209 cd05094 PTKc_TrkC Catalytic do 100.0 1.2E-31 2.6E-36 285.3 16.5 203 534-749 5-229 (291)
210 cd08219 STKc_Nek3 Catalytic do 100.0 1.1E-31 2.3E-36 279.6 15.8 198 535-750 1-204 (255)
211 cd07839 STKc_CDK5 Catalytic do 100.0 3.2E-32 7E-37 288.3 12.0 198 535-751 1-205 (284)
212 KOG4645 MAPKKK (MAP kinase kin 100.0 1.5E-33 3.2E-38 323.7 1.8 196 534-747 1235-1442(1509)
213 cd06655 STKc_PAK2 Catalytic do 100.0 1.2E-31 2.7E-36 286.0 16.5 196 534-750 19-219 (296)
214 cd07844 STKc_PCTAIRE_like Cata 100.0 5E-32 1.1E-36 288.0 13.5 198 534-750 5-208 (291)
215 PF07714 Pkinase_Tyr: Protein 100.0 2.9E-32 6.2E-37 285.0 11.2 192 539-748 4-208 (259)
216 PHA03209 serine/threonine kina 100.0 7.7E-32 1.7E-36 295.2 15.1 192 532-748 64-258 (357)
217 cd06656 STKc_PAK3 Catalytic do 100.0 1E-31 2.2E-36 286.8 15.4 196 534-750 19-219 (297)
218 cd05085 PTKc_Fer Catalytic dom 100.0 1.7E-31 3.8E-36 277.1 16.7 190 540-748 1-197 (250)
219 cd05116 PTKc_Syk Catalytic dom 100.0 1.7E-31 3.8E-36 278.6 16.7 188 541-749 2-202 (257)
220 cd05073 PTKc_Hck Catalytic dom 100.0 1.7E-31 3.7E-36 279.1 16.6 196 534-748 6-206 (260)
221 cd08229 STKc_Nek7 Catalytic do 100.0 1.1E-31 2.4E-36 281.4 15.2 200 534-749 2-209 (267)
222 cd06631 STKc_YSK4 Catalytic do 100.0 2.2E-31 4.7E-36 279.0 17.3 195 535-749 1-211 (265)
223 cd05115 PTKc_Zap-70 Catalytic 100.0 1.6E-31 3.6E-36 278.9 16.3 189 541-749 2-202 (257)
224 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 1.4E-31 2.9E-36 283.9 15.9 206 534-749 1-210 (286)
225 cd05034 PTKc_Src_like Catalyti 100.0 1.3E-31 2.9E-36 279.8 15.5 198 533-748 5-207 (261)
226 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 1.6E-31 3.4E-36 283.3 16.2 194 535-746 5-212 (284)
227 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 2.3E-31 5E-36 278.8 17.0 200 534-749 2-209 (267)
228 cd05055 PTKc_PDGFR Catalytic d 100.0 1.3E-31 2.9E-36 286.5 15.5 198 534-749 35-247 (302)
229 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 9.7E-32 2.1E-36 284.9 14.3 197 534-749 5-205 (284)
230 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 1.9E-31 4.2E-36 279.2 16.4 190 540-748 1-212 (262)
231 cd08221 STKc_Nek9 Catalytic do 100.0 2.6E-31 5.7E-36 276.7 17.3 197 535-749 1-204 (256)
232 cd06617 PKc_MKK3_6 Catalytic d 100.0 1.5E-31 3.2E-36 283.0 15.6 203 534-748 1-209 (283)
233 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 2E-31 4.3E-36 282.3 16.4 196 534-747 4-212 (284)
234 cd05107 PTKc_PDGFR_beta Cataly 100.0 1.2E-31 2.5E-36 296.8 15.1 202 534-748 37-344 (401)
235 KOG0669 Cyclin T-dependent kin 100.0 3.7E-34 8E-39 275.9 -4.3 212 534-764 17-246 (376)
236 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 1.5E-31 3.2E-36 282.0 15.0 190 541-749 2-225 (274)
237 cd05043 PTK_Ryk Pseudokinase d 100.0 1.9E-31 4.2E-36 281.8 15.9 205 533-749 5-223 (280)
238 cd05063 PTKc_EphR_A2 Catalytic 100.0 1.9E-31 4.1E-36 279.9 15.6 197 534-749 5-214 (268)
239 cd05061 PTKc_InsR Catalytic do 100.0 1.4E-31 3E-36 284.4 14.7 204 532-748 4-224 (288)
240 cd06613 STKc_MAP4K3_like Catal 100.0 3.8E-31 8.2E-36 276.3 17.8 200 534-749 3-207 (262)
241 cd07846 STKc_CDKL2_3 Catalytic 100.0 1E-31 2.2E-36 284.8 13.5 196 534-748 1-203 (286)
242 cd06651 STKc_MEKK3 Catalytic d 100.0 3.4E-31 7.5E-36 277.8 17.4 197 534-749 2-212 (266)
243 KOG0696 Serine/threonine prote 100.0 1.4E-32 3.1E-37 280.8 6.6 196 534-749 349-553 (683)
244 cd05058 PTKc_Met_Ron Catalytic 100.0 2.5E-31 5.4E-36 277.9 16.1 190 540-747 1-204 (262)
245 cd05633 STKc_GRK3 Catalytic do 100.0 2E-31 4.4E-36 281.8 15.5 190 541-749 1-199 (279)
246 cd05066 PTKc_EphR_A Catalytic 100.0 2.8E-31 6.2E-36 278.6 16.3 197 534-749 4-213 (267)
247 cd05083 PTKc_Chk Catalytic dom 100.0 2.5E-31 5.3E-36 276.8 15.1 196 534-750 6-202 (254)
248 cd07841 STKc_CDK7 Catalytic do 100.0 2.8E-31 6.1E-36 283.2 16.0 194 535-747 1-204 (298)
249 cd05091 PTKc_Ror2 Catalytic do 100.0 1.8E-31 3.9E-36 282.5 14.2 201 535-748 6-229 (283)
250 cd05045 PTKc_RET Catalytic dom 100.0 2.6E-31 5.7E-36 282.4 15.5 201 535-748 1-232 (290)
251 cd06608 STKc_myosinIII_like Ca 100.0 2.2E-31 4.7E-36 279.9 14.6 207 532-748 4-220 (275)
252 KOG0983 Mitogen-activated prot 100.0 1.8E-32 3.9E-37 267.2 5.9 197 536-748 94-296 (391)
253 cd05086 PTKc_Aatyk2 Catalytic 100.0 4.9E-31 1.1E-35 277.1 17.2 200 540-748 1-211 (268)
254 cd06658 STKc_PAK5 Catalytic do 100.0 1.4E-31 3.1E-36 284.9 13.3 193 536-749 24-221 (292)
255 cd05606 STKc_beta_ARK Catalyti 100.0 4.3E-31 9.4E-36 279.1 16.8 190 541-749 1-199 (278)
256 cd05101 PTKc_FGFR2 Catalytic d 100.0 3.9E-31 8.4E-36 283.2 16.6 202 534-748 15-242 (304)
257 cd07860 STKc_CDK2_3 Catalytic 100.0 2.5E-31 5.4E-36 281.5 14.9 196 535-748 1-203 (284)
258 cd05032 PTKc_InsR_like Catalyt 100.0 3E-31 6.4E-36 279.7 15.5 202 534-748 6-224 (277)
259 cd05065 PTKc_EphR_B Catalytic 100.0 4E-31 8.6E-36 277.7 16.3 196 535-749 5-215 (269)
260 PF00069 Pkinase: Protein kina 100.0 8.6E-32 1.9E-36 280.7 11.2 194 536-749 1-202 (260)
261 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 3.3E-31 7.1E-36 276.3 15.6 191 540-749 1-210 (259)
262 cd05098 PTKc_FGFR1 Catalytic d 100.0 2.7E-31 5.9E-36 284.8 15.3 202 534-748 18-245 (307)
263 cd05060 PTKc_Syk_like Catalyti 100.0 4.2E-31 9.2E-36 275.6 16.2 189 540-749 1-202 (257)
264 cd06659 STKc_PAK6 Catalytic do 100.0 2.4E-31 5.1E-36 283.9 14.4 192 537-749 24-220 (297)
265 cd05609 STKc_MAST Catalytic do 100.0 5.8E-31 1.2E-35 282.0 17.2 196 534-749 1-219 (305)
266 cd06653 STKc_MEKK3_like_1 Cata 100.0 6E-31 1.3E-35 275.7 16.9 196 534-748 2-211 (264)
267 cd06609 STKc_MST3_like Catalyt 100.0 4.2E-31 9E-36 278.3 15.7 195 534-749 1-201 (274)
268 cd06612 STKc_MST1_2 Catalytic 100.0 4.2E-31 9.1E-36 275.0 15.6 196 534-749 3-202 (256)
269 cd05112 PTKc_Itk Catalytic dom 100.0 4.7E-31 1E-35 274.9 15.9 197 534-749 4-205 (256)
270 cd05057 PTKc_EGFR_like Catalyt 100.0 5.4E-31 1.2E-35 278.3 16.6 197 534-750 7-216 (279)
271 cd05040 PTKc_Ack_like Catalyti 100.0 4.1E-31 8.9E-36 275.4 15.4 190 540-748 1-203 (257)
272 cd05053 PTKc_FGFR Catalytic do 100.0 4.5E-31 9.7E-36 281.0 15.9 204 533-749 11-238 (293)
273 cd06642 STKc_STK25-YSK1 Cataly 100.0 1.9E-31 4.2E-36 281.4 12.9 192 536-748 6-203 (277)
274 cd05047 PTKc_Tie Catalytic dom 100.0 5.2E-31 1.1E-35 277.2 16.0 197 540-749 1-215 (270)
275 cd07877 STKc_p38alpha_MAPK14 C 100.0 4.3E-31 9.3E-36 288.1 15.9 205 524-748 7-220 (345)
276 cd05097 PTKc_DDR_like Catalyti 100.0 4.5E-31 9.7E-36 281.4 15.5 202 534-748 5-235 (295)
277 cd05075 PTKc_Axl Catalytic dom 100.0 7.4E-31 1.6E-35 276.0 17.0 199 537-748 2-217 (272)
278 cd07832 STKc_CCRK Catalytic do 100.0 6.7E-31 1.4E-35 278.3 16.6 194 535-747 1-202 (286)
279 cd05574 STKc_phototropin_like 100.0 6.2E-31 1.3E-35 283.2 16.4 198 534-749 1-235 (316)
280 cd06628 STKc_MAPKKK_Byr2_like 100.0 7.6E-31 1.7E-35 275.1 16.6 193 536-748 2-214 (267)
281 cd05110 PTKc_HER4 Catalytic do 100.0 4.2E-31 9.2E-36 282.8 14.9 195 534-748 7-214 (303)
282 cd05095 PTKc_DDR2 Catalytic do 100.0 5.6E-31 1.2E-35 280.8 15.6 202 534-748 5-236 (296)
283 cd06632 STKc_MEKK1_plant Catal 100.0 8.3E-31 1.8E-35 272.9 16.5 196 535-749 1-205 (258)
284 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 2.3E-31 4.9E-36 277.9 12.2 189 540-747 1-207 (258)
285 cd06607 STKc_TAO Catalytic dom 100.0 9.2E-31 2E-35 280.7 17.2 198 534-749 15-217 (307)
286 cd05050 PTKc_Musk Catalytic do 100.0 4.3E-31 9.4E-36 280.4 14.5 204 533-749 4-236 (288)
287 cd05092 PTKc_TrkA Catalytic do 100.0 5.5E-31 1.2E-35 278.5 15.2 202 534-748 5-227 (280)
288 cd06647 STKc_PAK_I Catalytic d 100.0 8.2E-31 1.8E-35 279.2 16.3 195 534-749 19-218 (293)
289 cd05051 PTKc_DDR Catalytic dom 100.0 7.4E-31 1.6E-35 279.6 15.7 203 533-748 4-236 (296)
290 cd06640 STKc_MST4 Catalytic do 100.0 7.7E-31 1.7E-35 276.9 15.6 194 535-749 5-204 (277)
291 cd05099 PTKc_FGFR4 Catalytic d 100.0 8.3E-31 1.8E-35 282.0 16.1 202 534-748 12-239 (314)
292 cd08217 STKc_Nek2 Catalytic do 100.0 9.7E-31 2.1E-35 273.2 16.1 203 535-749 1-213 (265)
293 cd06629 STKc_MAPKKK_Bck1_like 100.0 9.3E-31 2E-35 275.3 15.9 196 535-748 2-214 (272)
294 cd07837 STKc_CdkB_plant Cataly 100.0 9.3E-31 2E-35 278.7 16.0 201 534-748 1-214 (295)
295 cd00192 PTKc Catalytic domain 100.0 1.2E-30 2.5E-35 272.0 16.3 197 540-749 1-211 (262)
296 cd08218 STKc_Nek1 Catalytic do 100.0 9.5E-31 2.1E-35 272.6 15.6 198 535-750 1-205 (256)
297 KOG0604 MAP kinase-activated p 100.0 6.7E-32 1.4E-36 266.6 6.4 196 532-748 59-265 (400)
298 KOG4257 Focal adhesion tyrosin 100.0 4.1E-31 8.8E-36 282.3 12.9 191 537-747 392-594 (974)
299 cd07879 STKc_p38delta_MAPK13 C 100.0 9.5E-31 2.1E-35 285.0 16.1 195 534-749 15-218 (342)
300 cd06917 STKc_NAK1_like Catalyt 100.0 9.4E-31 2E-35 276.0 15.4 196 535-750 2-206 (277)
301 cd07845 STKc_CDK10 Catalytic d 100.0 1.1E-30 2.3E-35 280.4 16.0 198 533-748 6-211 (309)
302 cd08220 STKc_Nek8 Catalytic do 100.0 1.8E-30 3.8E-35 270.3 17.1 198 535-750 1-205 (256)
303 cd07843 STKc_CDC2L1 Catalytic 100.0 8E-31 1.7E-35 279.1 14.8 197 534-748 5-209 (293)
304 cd07833 STKc_CDKL Catalytic do 100.0 9.1E-31 2E-35 277.5 15.1 196 534-748 1-204 (288)
305 cd07836 STKc_Pho85 Catalytic d 100.0 1.2E-30 2.7E-35 276.1 16.0 198 535-749 1-204 (284)
306 cd07849 STKc_ERK1_2_like Catal 100.0 8.1E-31 1.8E-35 284.9 14.8 196 533-748 4-212 (336)
307 cd06610 STKc_OSR1_SPAK Catalyt 100.0 2E-30 4.3E-35 271.5 17.2 200 534-749 1-210 (267)
308 cd05577 STKc_GRK Catalytic dom 100.0 1.3E-30 2.9E-35 275.1 15.7 191 542-750 1-198 (277)
309 cd05613 STKc_MSK1_N N-terminal 100.0 1.5E-30 3.3E-35 276.5 16.3 195 535-747 1-209 (290)
310 cd05056 PTKc_FAK Catalytic dom 100.0 1.6E-30 3.4E-35 273.3 16.1 196 534-749 6-212 (270)
311 cd05100 PTKc_FGFR3 Catalytic d 100.0 1.7E-30 3.6E-35 282.2 16.7 203 534-749 12-240 (334)
312 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 1.3E-30 2.9E-35 276.7 15.5 201 534-749 1-206 (287)
313 cd05578 STKc_Yank1 Catalytic d 100.0 8.3E-31 1.8E-35 273.4 13.7 196 535-750 1-203 (258)
314 cd06605 PKc_MAPKK Catalytic do 100.0 9E-31 2E-35 274.1 13.9 197 534-749 1-202 (265)
315 cd05046 PTK_CCK4 Pseudokinase 100.0 1.5E-30 3.2E-35 274.2 15.6 202 534-748 5-221 (275)
316 cd06623 PKc_MAPKK_plant_like C 100.0 2.3E-30 5.1E-35 270.5 16.8 196 534-749 1-203 (264)
317 cd06630 STKc_MEKK1 Catalytic d 100.0 1.6E-30 3.6E-35 272.6 15.7 195 535-749 1-211 (268)
318 cd06626 STKc_MEKK4 Catalytic d 100.0 2.6E-30 5.7E-35 270.3 17.1 198 535-749 1-209 (264)
319 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 1.2E-30 2.7E-35 282.4 14.6 202 528-749 4-209 (328)
320 cd05044 PTKc_c-ros Catalytic d 100.0 9.3E-31 2E-35 274.7 13.1 196 540-748 1-216 (269)
321 KOG0596 Dual specificity; seri 100.0 4E-31 8.7E-36 280.3 10.2 201 535-747 362-573 (677)
322 cd05041 PTKc_Fes_like Catalyti 100.0 3E-30 6.6E-35 267.9 16.7 191 540-749 1-199 (251)
323 cd07831 STKc_MOK Catalytic dom 100.0 2.4E-30 5.2E-35 273.4 16.2 195 536-749 1-202 (282)
324 KOG1151 Tousled-like protein k 100.0 3E-31 6.6E-36 273.1 8.9 203 535-750 464-688 (775)
325 cd06648 STKc_PAK_II Catalytic 100.0 2.9E-30 6.2E-35 273.8 16.7 193 536-749 21-218 (285)
326 cd06641 STKc_MST3 Catalytic do 100.0 2.5E-30 5.5E-35 273.0 16.2 192 536-748 6-203 (277)
327 cd07835 STKc_CDK1_like Catalyt 100.0 2.7E-30 5.8E-35 273.4 16.1 196 536-749 1-203 (283)
328 cd07864 STKc_CDK12 Catalytic d 100.0 2.4E-30 5.1E-35 276.6 15.8 201 531-749 4-221 (302)
329 PLN00009 cyclin-dependent kina 100.0 2.5E-30 5.3E-35 275.5 15.8 197 534-748 2-206 (294)
330 cd07855 STKc_ERK5 Catalytic do 100.0 1.4E-30 3E-35 282.9 14.1 198 533-749 4-215 (334)
331 cd07880 STKc_p38gamma_MAPK12 C 100.0 1.9E-30 4.1E-35 282.7 15.0 199 531-749 12-219 (343)
332 PHA03390 pk1 serine/threonine- 100.0 4.5E-30 9.7E-35 269.7 17.2 198 526-748 6-208 (267)
333 KOG4236 Serine/threonine prote 100.0 3E-31 6.6E-36 278.2 8.2 198 539-755 569-775 (888)
334 cd06614 STKc_PAK Catalytic dom 100.0 3.9E-30 8.6E-35 272.8 16.9 199 532-749 17-219 (286)
335 cd06635 STKc_TAO1 Catalytic do 100.0 4.2E-30 9.2E-35 276.9 17.4 196 536-749 27-227 (317)
336 KOG0695 Serine/threonine prote 100.0 4.5E-31 9.8E-36 263.3 9.0 195 533-747 249-452 (593)
337 cd06616 PKc_MKK4 Catalytic dom 100.0 1E-30 2.3E-35 277.4 12.4 200 535-749 5-213 (288)
338 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 2.6E-30 5.6E-35 273.4 15.0 197 534-748 4-214 (284)
339 cd07865 STKc_CDK9 Catalytic do 100.0 3.4E-30 7.4E-35 276.2 16.0 199 533-749 11-227 (310)
340 cd05572 STKc_cGK_PKG Catalytic 100.0 4.1E-30 8.9E-35 268.8 16.2 189 542-750 1-196 (262)
341 cd05074 PTKc_Tyro3 Catalytic d 100.0 5.2E-30 1.1E-34 269.6 16.9 201 536-749 1-219 (273)
342 cd07850 STKc_JNK Catalytic dom 100.0 3.3E-30 7.2E-35 282.1 15.5 196 532-749 14-220 (353)
343 cd07840 STKc_CDK9_like Catalyt 100.0 4.1E-30 8.9E-35 272.1 15.5 197 536-750 1-206 (287)
344 cd07842 STKc_CDK8_like Catalyt 100.0 3.8E-30 8.2E-35 276.7 15.4 201 535-749 1-219 (316)
345 KOG1025 Epidermal growth facto 100.0 2.4E-31 5.3E-36 291.9 6.1 193 536-748 698-903 (1177)
346 cd08225 STKc_Nek5 Catalytic do 100.0 3.5E-30 7.6E-35 268.2 14.5 197 535-749 1-205 (257)
347 PHA03210 serine/threonine kina 100.0 1.2E-30 2.6E-35 297.6 11.8 199 532-746 146-368 (501)
348 cd07852 STKc_MAPK15 Catalytic 100.0 3.2E-30 6.9E-35 280.3 14.5 197 532-748 5-215 (337)
349 smart00219 TyrKc Tyrosine kina 100.0 7.9E-30 1.7E-34 265.4 16.6 194 537-748 2-207 (258)
350 cd07866 STKc_BUR1 Catalytic do 100.0 4.4E-30 9.6E-35 275.4 15.0 198 533-748 7-229 (311)
351 KOG0587 Traf2- and Nck-interac 100.0 3.5E-30 7.6E-35 286.5 13.9 211 526-748 11-230 (953)
352 cd08528 STKc_Nek10 Catalytic d 100.0 7.5E-30 1.6E-34 267.9 15.3 200 535-749 1-216 (269)
353 cd05611 STKc_Rim15_like Cataly 100.0 9.3E-30 2E-34 265.8 15.8 189 540-749 2-196 (260)
354 KOG0614 cGMP-dependent protein 100.0 1.8E-31 4E-36 279.3 2.8 195 535-749 421-622 (732)
355 cd05122 PKc_STE Catalytic doma 100.0 1.2E-29 2.7E-34 262.4 16.5 196 535-749 1-200 (253)
356 cd07858 STKc_TEY_MAPK_plant Ca 100.0 5.4E-30 1.2E-34 278.5 14.4 197 533-748 4-211 (337)
357 cd07830 STKc_MAK_like Catalyti 100.0 9.7E-30 2.1E-34 269.1 15.4 195 536-748 1-201 (283)
358 cd06657 STKc_PAK4 Catalytic do 100.0 8.5E-30 1.8E-34 271.2 14.8 189 539-748 25-218 (292)
359 cd06618 PKc_MKK7 Catalytic dom 100.0 1E-29 2.2E-34 271.2 14.9 199 534-748 15-220 (296)
360 KOG0668 Casein kinase II, alph 100.0 4.1E-31 8.9E-36 251.6 3.5 208 533-763 37-250 (338)
361 KOG0199 ACK and related non-re 100.0 1.2E-30 2.7E-35 281.9 7.3 191 538-747 114-317 (1039)
362 PTZ00024 cyclin-dependent prot 100.0 1.2E-29 2.6E-34 275.6 15.2 196 534-749 8-237 (335)
363 cd08226 PK_STRAD_beta Pseudoki 100.0 1.6E-29 3.4E-34 273.9 15.8 194 540-749 4-213 (328)
364 cd05579 STKc_MAST_like Catalyt 100.0 1.2E-29 2.6E-34 265.0 14.1 188 542-749 1-204 (265)
365 cd06633 STKc_TAO3 Catalytic do 100.0 3.8E-29 8.2E-34 269.0 18.4 197 536-750 23-224 (313)
366 cd06606 STKc_MAPKKK Catalytic 100.0 2.3E-29 5.1E-34 261.4 16.2 197 535-750 1-207 (260)
367 PHA02882 putative serine/threo 100.0 1.3E-29 2.8E-34 270.1 14.1 196 534-749 12-236 (294)
368 cd08216 PK_STRAD Pseudokinase 100.0 1.5E-29 3.2E-34 272.1 14.5 191 542-749 10-213 (314)
369 cd06627 STKc_Cdc7_like Catalyt 100.0 3.4E-29 7.4E-34 260.0 16.7 195 535-749 1-202 (254)
370 cd08530 STKc_CNK2-like Catalyt 100.0 1.8E-29 3.8E-34 262.6 13.9 200 535-750 1-205 (256)
371 cd07838 STKc_CDK4_6_like Catal 100.0 4.4E-29 9.6E-34 264.4 16.9 195 536-748 1-208 (287)
372 cd07834 STKc_MAPK Catalytic do 100.0 1.7E-29 3.7E-34 273.7 14.0 196 535-749 1-210 (330)
373 cd06634 STKc_TAO2 Catalytic do 100.0 2.8E-29 6E-34 269.4 15.4 195 536-748 17-216 (308)
374 cd07851 STKc_p38 Catalytic dom 100.0 8.8E-30 1.9E-34 277.5 11.8 198 532-749 13-219 (343)
375 KOG1035 eIF-2alpha kinase GCN2 100.0 3.4E-30 7.5E-35 294.9 8.8 196 530-741 475-813 (1351)
376 cd07854 STKc_MAPK4_6 Catalytic 100.0 1.6E-29 3.4E-34 275.5 13.2 196 534-749 5-222 (342)
377 cd05576 STKc_RPK118_like Catal 100.0 2.7E-29 5.8E-34 258.9 13.8 179 545-747 4-183 (237)
378 cd05583 STKc_MSK_N N-terminal 100.0 2.6E-29 5.6E-34 266.8 14.0 195 535-747 1-209 (288)
379 cd05581 STKc_PDK1 Catalytic do 100.0 2.4E-29 5.2E-34 265.3 13.3 196 534-749 1-225 (280)
380 KOG0664 Nemo-like MAPK-related 100.0 1.8E-31 3.8E-36 259.8 -2.7 207 536-762 55-273 (449)
381 cd08215 STKc_Nek Catalytic dom 100.0 1E-28 2.2E-33 256.7 17.7 200 535-750 1-207 (258)
382 cd05118 STKc_CMGC Catalytic do 100.0 3.6E-29 7.9E-34 264.4 14.5 195 536-749 1-202 (283)
383 cd07857 STKc_MPK1 Catalytic do 100.0 4.4E-29 9.5E-34 270.8 14.6 196 535-749 1-213 (332)
384 PLN03224 probable serine/threo 100.0 8E-29 1.7E-33 277.3 15.5 213 532-747 143-434 (507)
385 cd07829 STKc_CDK_like Catalyti 100.0 8.2E-29 1.8E-33 261.6 13.9 194 536-748 1-201 (282)
386 KOG0603 Ribosomal protein S6 k 100.0 1.6E-29 3.5E-34 274.5 8.5 196 533-752 321-519 (612)
387 KOG0665 Jun-N-terminal kinase 100.0 5.7E-30 1.2E-34 255.8 3.8 204 534-764 17-231 (369)
388 cd05123 STKc_AGC Catalytic dom 100.0 1.7E-28 3.7E-33 254.3 14.9 189 542-750 1-197 (250)
389 cd08222 STKc_Nek11 Catalytic d 100.0 1.7E-28 3.6E-33 256.4 12.4 197 535-748 1-207 (260)
390 KOG0200 Fibroblast/platelet-de 100.0 5.6E-28 1.2E-32 280.0 15.5 201 534-747 296-523 (609)
391 KOG0671 LAMMER dual specificit 99.9 4.5E-29 9.8E-34 255.1 4.8 199 533-750 88-313 (415)
392 KOG1152 Signal transduction se 99.9 4E-28 8.8E-33 258.1 10.7 195 534-747 561-770 (772)
393 PLN03225 Serine/threonine-prot 99.9 8.1E-28 1.8E-32 276.0 12.8 210 532-747 130-380 (566)
394 KOG4194 Membrane glycoprotein 99.9 4.6E-29 9.9E-34 265.3 2.2 293 107-401 139-436 (873)
395 KOG4194 Membrane glycoprotein 99.9 7.8E-29 1.7E-33 263.6 3.7 286 110-399 95-383 (873)
396 KOG1345 Serine/threonine kinas 99.9 6.8E-29 1.5E-33 242.2 2.6 203 534-751 24-230 (378)
397 smart00221 STYKc Protein kinas 99.9 4.3E-27 9.3E-32 239.2 14.7 195 536-748 1-202 (225)
398 smart00220 S_TKc Serine/Threon 99.9 1.1E-25 2.4E-30 231.0 13.7 183 546-748 1-188 (244)
399 KOG0576 Mitogen-activated prot 99.9 5.9E-27 1.3E-31 253.3 3.1 197 533-746 14-215 (829)
400 KOG1024 Receptor-like protein 99.9 1.1E-25 2.4E-30 229.7 10.9 213 527-751 277-504 (563)
401 KOG0670 U4/U6-associated splic 99.9 2.1E-26 4.5E-31 242.2 5.5 195 534-746 432-635 (752)
402 cd05610 STKc_MASTL Catalytic d 99.9 4.1E-25 8.9E-30 259.9 15.7 184 534-736 4-195 (669)
403 KOG1167 Serine/threonine prote 99.9 2.1E-25 4.4E-30 231.5 5.8 203 529-754 31-286 (418)
404 KOG1290 Serine/threonine prote 99.9 1.1E-24 2.4E-29 228.4 8.2 134 534-675 78-223 (590)
405 PRK09188 serine/threonine prot 99.9 9.3E-24 2E-28 227.0 13.9 159 532-711 16-194 (365)
406 KOG1027 Serine/threonine prote 99.9 6.3E-25 1.4E-29 243.8 4.9 192 536-747 511-716 (903)
407 cd00180 PKc Catalytic domain o 99.9 3.5E-23 7.7E-28 207.0 15.2 180 542-739 1-187 (215)
408 KOG0444 Cytoskeletal regulator 99.9 8.5E-26 1.8E-30 241.5 -4.1 280 112-402 73-359 (1255)
409 KOG0444 Cytoskeletal regulator 99.9 1.9E-25 4.1E-30 238.8 -3.3 299 87-402 8-313 (1255)
410 PRK15370 E3 ubiquitin-protein 99.9 1.5E-21 3.3E-26 227.6 20.5 314 47-395 61-429 (754)
411 cd05147 RIO1_euk RIO kinase fa 99.9 1.5E-21 3.1E-26 193.3 11.4 138 539-690 2-167 (190)
412 PRK15387 E3 ubiquitin-protein 99.9 9.7E-21 2.1E-25 219.4 18.8 240 117-400 201-440 (788)
413 PLN00181 protein SPA1-RELATED; 99.8 3.6E-22 7.8E-27 240.7 5.7 144 585-747 28-216 (793)
414 cd05145 RIO1_like RIO kinase f 99.8 8.5E-21 1.8E-25 188.4 13.8 138 539-691 2-168 (190)
415 PLN03210 Resistant to P. syrin 99.8 1.2E-19 2.6E-24 225.6 25.4 279 111-401 552-865 (1153)
416 KOG0472 Leucine-rich repeat pr 99.8 5.5E-24 1.2E-28 218.1 -11.2 242 141-394 67-310 (565)
417 KOG0472 Leucine-rich repeat pr 99.8 8.2E-24 1.8E-28 216.8 -10.4 248 111-372 62-309 (565)
418 PRK15370 E3 ubiquitin-protein 99.8 1.3E-20 2.8E-25 219.8 12.7 272 81-396 173-447 (754)
419 COG0515 SPS1 Serine/threonine 99.8 3.9E-20 8.5E-25 197.7 15.1 198 536-749 2-214 (384)
420 PRK10359 lipopolysaccharide co 99.8 7.9E-21 1.7E-25 190.2 8.7 170 533-740 30-216 (232)
421 PRK12274 serine/threonine prot 99.8 5.7E-20 1.2E-24 180.0 11.1 183 537-750 5-211 (218)
422 PRK15387 E3 ubiquitin-protein 99.8 4.4E-19 9.5E-24 205.7 18.0 237 142-417 201-438 (788)
423 PRK10345 hypothetical protein; 99.8 2.1E-19 4.5E-24 179.6 12.4 138 536-688 4-158 (210)
424 PLN03210 Resistant to P. syrin 99.8 2.5E-18 5.4E-23 213.9 23.7 269 115-400 609-888 (1153)
425 KOG1164 Casein kinase (serine/ 99.8 7.7E-19 1.7E-23 189.3 13.1 198 535-750 19-241 (322)
426 smart00750 KIND kinase non-cat 99.8 1.3E-19 2.9E-24 177.5 6.2 107 615-749 1-107 (176)
427 KOG0603 Ribosomal protein S6 k 99.8 2.6E-20 5.6E-25 203.2 0.8 185 541-748 1-193 (612)
428 KOG0618 Serine/threonine phosp 99.8 7.9E-21 1.7E-25 213.2 -4.9 264 117-392 219-487 (1081)
429 smart00090 RIO RIO-like kinase 99.8 2.1E-18 4.6E-23 176.6 12.3 144 535-692 29-200 (237)
430 KOG1163 Casein kinase (serine/ 99.8 1.7E-18 3.7E-23 167.1 8.3 206 526-753 8-228 (341)
431 cd05144 RIO2_C RIO kinase fami 99.7 8.6E-18 1.9E-22 168.1 12.0 143 528-691 9-176 (198)
432 KOG0590 Checkpoint kinase and 99.7 4.4E-19 9.6E-24 203.3 3.0 196 537-752 321-531 (601)
433 PRK14879 serine/threonine prot 99.7 1.4E-17 3.1E-22 168.3 12.5 133 540-689 2-143 (211)
434 KOG0618 Serine/threonine phosp 99.7 6.9E-20 1.5E-24 205.8 -5.1 265 116-391 240-510 (1081)
435 cd00116 LRR_RI Leucine-rich re 99.7 1E-19 2.2E-24 196.1 -3.8 234 114-348 20-291 (319)
436 KOG1165 Casein kinase (serine/ 99.7 1.6E-17 3.5E-22 167.3 11.1 191 535-747 29-237 (449)
437 KOG4237 Extracellular matrix p 99.7 6.6E-20 1.4E-24 188.3 -6.2 272 120-394 70-359 (498)
438 KOG0195 Integrin-linked kinase 99.7 8.8E-19 1.9E-23 171.4 1.6 194 539-750 195-393 (448)
439 cd00116 LRR_RI Leucine-rich re 99.7 2.4E-19 5.1E-24 193.3 -3.4 202 122-324 3-234 (319)
440 KOG0617 Ras suppressor protein 99.7 1.1E-19 2.4E-24 166.6 -5.4 156 114-275 30-186 (264)
441 PRK09605 bifunctional UGMP fam 99.7 2.6E-17 5.6E-22 189.5 11.5 137 533-690 332-477 (535)
442 TIGR03724 arch_bud32 Kae1-asso 99.7 4.2E-17 9E-22 163.3 11.2 130 541-690 1-139 (199)
443 KOG0617 Ras suppressor protein 99.7 7.2E-19 1.6E-23 161.3 -5.2 126 168-297 35-161 (264)
444 PF14531 Kinase-like: Kinase-l 99.7 4.2E-17 9.2E-22 168.3 5.5 208 536-752 14-256 (288)
445 PLN03150 hypothetical protein; 99.7 4.4E-16 9.5E-21 181.2 13.4 157 44-252 367-529 (623)
446 KOG4237 Extracellular matrix p 99.6 1.3E-18 2.8E-23 178.8 -7.7 258 143-402 68-343 (498)
447 cd05119 RIO RIO kinase family, 99.6 2.6E-16 5.7E-21 155.8 8.3 134 539-690 2-164 (187)
448 cd05120 APH_ChoK_like Aminogly 99.6 1.9E-15 4.1E-20 143.2 11.9 135 538-689 2-138 (155)
449 KOG1023 Natriuretic peptide re 99.6 5.7E-16 1.2E-20 169.8 8.5 155 583-749 1-161 (484)
450 KOG1240 Protein kinase contain 99.6 8E-17 1.7E-21 184.0 1.4 198 535-746 24-239 (1431)
451 PRK01723 3-deoxy-D-manno-octul 99.6 3.1E-15 6.7E-20 153.5 12.7 136 539-690 36-192 (239)
452 KOG1166 Mitotic checkpoint ser 99.6 5.9E-16 1.3E-20 180.8 6.9 191 532-744 696-901 (974)
453 KOG0606 Microtubule-associated 99.6 1.4E-15 2.9E-20 174.1 5.4 162 533-750 82-262 (1205)
454 KOG1033 eIF-2alpha kinase PEK/ 99.5 1.9E-15 4.1E-20 162.4 0.8 185 538-741 248-457 (516)
455 KOG0590 Checkpoint kinase and 99.5 5.4E-15 1.2E-19 169.8 3.5 207 535-759 21-243 (601)
456 KOG4158 BRPK/PTEN-induced prot 99.5 3.1E-14 6.6E-19 146.9 7.5 147 587-748 274-459 (598)
457 TIGR01982 UbiB 2-polyprenylphe 99.5 1.5E-13 3.2E-18 153.3 11.4 141 539-691 122-308 (437)
458 KOG0532 Leucine-rich repeat (L 99.4 8.8E-15 1.9E-19 157.2 -4.2 175 115-299 73-247 (722)
459 PRK04750 ubiB putative ubiquin 99.3 2.1E-12 4.6E-17 145.5 10.0 143 535-691 121-315 (537)
460 KOG0532 Leucine-rich repeat (L 99.3 2.5E-14 5.4E-19 153.7 -5.3 177 141-327 74-250 (722)
461 cd05151 ChoK Choline Kinase (C 99.3 5.3E-12 1.2E-16 122.7 10.6 132 539-689 3-136 (170)
462 COG4886 Leucine-rich repeat (L 99.3 2.1E-12 4.6E-17 143.6 6.6 198 146-353 97-295 (394)
463 COG4886 Leucine-rich repeat (L 99.3 3.1E-12 6.8E-17 142.2 7.3 201 121-332 97-298 (394)
464 PLN03150 hypothetical protein; 99.3 4.8E-12 1E-16 147.6 8.5 113 167-279 419-532 (623)
465 cd05154 ACAD10_11_like Acyl-Co 99.2 1.5E-10 3.2E-15 117.6 12.3 143 539-689 3-206 (223)
466 cd05146 RIO3_euk RIO kinase fa 99.1 4.1E-10 9E-15 110.7 11.7 134 540-690 3-174 (197)
467 KOG0601 Cyclin-dependent kinas 99.1 8.7E-11 1.9E-15 129.3 4.6 195 530-744 261-464 (524)
468 KOG1266 Protein kinase [Signal 99.1 1.5E-10 3.2E-15 117.5 5.7 151 582-745 120-281 (458)
469 KOG1243 Protein kinase [Genera 99.0 9.9E-10 2.2E-14 122.0 11.3 163 554-742 33-199 (690)
470 KOG3207 Beta-tubulin folding c 99.0 4.5E-11 9.7E-16 125.5 -0.2 190 140-349 144-340 (505)
471 KOG3207 Beta-tubulin folding c 99.0 6.1E-11 1.3E-15 124.6 0.3 186 113-299 142-339 (505)
472 KOG1259 Nischarin, modulator o 99.0 8.4E-11 1.8E-15 117.5 0.2 201 141-351 213-415 (490)
473 KOG1259 Nischarin, modulator o 99.0 8.4E-11 1.8E-15 117.6 -0.4 207 158-376 206-415 (490)
474 KOG0606 Microtubule-associated 99.0 1.6E-10 3.4E-15 133.3 1.1 199 534-752 804-1041(1205)
475 PF14580 LRR_9: Leucine-rich r 98.9 4.2E-10 9.1E-15 108.5 2.6 109 186-299 15-126 (175)
476 COG3642 Mn2+-dependent serine/ 98.9 7.9E-09 1.7E-13 98.2 11.1 130 540-689 2-140 (204)
477 PF14580 LRR_9: Leucine-rich r 98.9 3.2E-10 7E-15 109.3 1.6 101 189-292 41-146 (175)
478 KOG0531 Protein phosphatase 1, 98.9 1.9E-10 4.1E-15 128.4 -1.2 242 141-398 71-322 (414)
479 KOG0601 Cyclin-dependent kinas 98.9 2.3E-09 4.9E-14 118.3 6.6 190 536-746 116-327 (524)
480 KOG3087 Serine/threonine prote 98.9 2.3E-08 5E-13 94.4 11.5 142 538-689 11-165 (229)
481 PRK15123 lipopolysaccharide co 98.8 8.1E-08 1.8E-12 99.9 14.3 141 540-689 28-194 (268)
482 KOG1909 Ran GTPase-activating 98.8 4.5E-10 9.8E-15 115.2 -2.9 239 86-348 30-311 (382)
483 KOG0531 Protein phosphatase 1, 98.7 2E-09 4.4E-14 120.2 0.6 246 115-376 70-321 (414)
484 KOG4658 Apoptotic ATPase [Sign 98.7 9.2E-09 2E-13 122.9 5.5 248 118-374 546-808 (889)
485 PF13855 LRR_8: Leucine rich r 98.7 7.7E-09 1.7E-13 82.0 2.8 59 143-201 2-60 (61)
486 PF01163 RIO1: RIO1 family; I 98.7 9.2E-08 2E-12 93.8 10.5 124 549-690 1-156 (188)
487 PF13855 LRR_8: Leucine rich r 98.7 9.7E-09 2.1E-13 81.4 2.6 59 167-225 2-60 (61)
488 KOG3741 Poly(A) ribonuclease s 98.6 1.7E-07 3.6E-12 101.4 10.6 171 548-744 290-474 (655)
489 KOG4658 Apoptotic ATPase [Sign 98.6 1.4E-08 3E-13 121.4 2.0 126 143-271 524-651 (889)
490 cd05610 STKc_MASTL Catalytic d 98.5 4.6E-08 1E-12 115.9 3.6 90 649-749 488-583 (669)
491 KOG1859 Leucine-rich repeat pr 98.5 3E-09 6.5E-14 117.9 -7.2 126 191-323 165-291 (1096)
492 KOG1909 Ran GTPase-activating 98.5 2.3E-08 5.1E-13 102.8 -0.4 188 111-298 86-310 (382)
493 COG0478 RIO-like serine/threon 98.4 8.2E-07 1.8E-11 89.6 9.6 132 537-689 94-251 (304)
494 PF06293 Kdo: Lipopolysacchari 98.4 2.5E-06 5.4E-11 85.7 11.1 108 573-690 55-171 (206)
495 KOG1859 Leucine-rich repeat pr 98.4 6.1E-09 1.3E-13 115.5 -8.6 126 167-299 165-292 (1096)
496 PF08263 LRRNT_2: Leucine rich 98.3 6.4E-07 1.4E-11 65.2 4.4 36 48-84 2-43 (43)
497 TIGR02172 Fb_sc_TIGR02172 Fibr 98.3 7.2E-06 1.5E-10 83.5 12.9 139 539-688 6-181 (226)
498 COG0661 AarF Predicted unusual 98.3 3.2E-06 6.9E-11 95.3 10.6 139 540-691 131-316 (517)
499 PRK09902 hypothetical protein; 98.3 1.9E-05 4.1E-10 78.1 14.3 155 525-689 9-179 (216)
500 KOG0576 Mitogen-activated prot 98.2 3.3E-07 7.1E-12 101.4 0.9 182 537-746 245-430 (829)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=2.9e-78 Score=745.62 Aligned_cols=198 Identities=28% Similarity=0.423 Sum_probs=165.0
Q ss_pred cccHHHHHHHhCCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccCHHHHHHHHHHHhhcCCCCcccceeEEEec
Q 004248 523 SFTYQQLLAATGDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMER 601 (766)
Q Consensus 523 ~~~~~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~ 601 (766)
.++++++.. .|...++||+|+||.||+|+. .+|+.||||+++..... ..+|++++++++|||||+++|+|.+
T Consensus 682 ~~~~~~~~~---~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~---~~~~~~~l~~l~HpnIv~~~~~~~~- 754 (968)
T PLN00113 682 SITINDILS---SLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI---PSSEIADMGKLQHPNIVKLIGLCRS- 754 (968)
T ss_pred hhhHHHHHh---hCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc---cHHHHHHHhhCCCCCcceEEEEEEc-
Confidence 355666543 577888999999999999995 67999999998643322 2356889999999999999998876
Q ss_pred CCcEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEe
Q 004248 602 ENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRL 681 (766)
Q Consensus 602 ~~~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl 681 (766)
++..|+|||||++|+|.++++ .++|.++.+|+.|||+||+|||+++.++|+||||||+||+++.++.+|+
T Consensus 755 ~~~~~lv~Ey~~~g~L~~~l~----------~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~ 824 (968)
T PLN00113 755 EKGAYLIHEYIEGKNLSEVLR----------NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHL 824 (968)
T ss_pred CCCCEEEEeCCCCCcHHHHHh----------cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEE
Confidence 567899999999999999995 2899999999999999999999877789999999999999999999888
Q ss_pred ccchhhhhcCCCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 682 GSLSEVCAQGGDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 682 ~DFG~a~~~~~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
. ||.+...... ....+|..|+|||...... +++|+|||||||++|||+||+.||+.
T Consensus 825 ~-~~~~~~~~~~-~~~~~t~~y~aPE~~~~~~---------~~~~sDv~S~Gvvl~el~tg~~p~~~ 880 (968)
T PLN00113 825 R-LSLPGLLCTD-TKCFISSAYVAPETRETKD---------ITEKSDIYGFGLILIELLTGKSPADA 880 (968)
T ss_pred E-eccccccccC-CCccccccccCcccccCCC---------CCcccchhhHHHHHHHHHhCCCCCCc
Confidence 5 6665443222 2235788999999876543 57899999999999999999999854
No 2
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-49 Score=428.64 Aligned_cols=216 Identities=38% Similarity=0.635 Sum_probs=193.4
Q ss_pred CccccHHHHHHHhCCCCccceeecCCcceEEEEEEcCCcEEEEEEeeccccC-HHHHHHHHHHHhhcCCCCcccceeEEE
Q 004248 521 GESFTYQQLLAATGDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVK-TEAYLLELDFFSKVSHARLVPLLGHCM 599 (766)
Q Consensus 521 ~~~~~~~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~-~~~~~~E~~~l~~l~H~niv~l~~~~~ 599 (766)
...|+++|+.+||++|+..++||+|+||.||+|.+++|+.||||++...... .++|.+|++++.+++|||+|+|+|||.
T Consensus 62 ~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC~ 141 (361)
T KOG1187|consen 62 LRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYCL 141 (361)
T ss_pred cceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEEe
Confidence 4579999999999999999999999999999999999999999999776654 567999999999999999999999999
Q ss_pred ecCCcEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcE
Q 004248 600 ERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEV 679 (766)
Q Consensus 600 ~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~ 679 (766)
+.+++.+||||||++|+|.++|+..... .++|.+|++||.++|+||+|||+.+.|+||||||||+|||||+++++
T Consensus 142 e~~~~~~LVYEym~nGsL~d~L~~~~~~-----~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~a 216 (361)
T KOG1187|consen 142 EGGEHRLLVYEYMPNGSLEDHLHGKKGE-----PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNA 216 (361)
T ss_pred cCCceEEEEEEccCCCCHHHHhCCCCCC-----CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCE
Confidence 7432599999999999999999875431 68999999999999999999999999999999999999999999999
Q ss_pred EeccchhhhhcCC-CCccc---eeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCCc
Q 004248 680 RLGSLSEVCAQGG-DAHQS---RITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSSR 750 (766)
Q Consensus 680 kl~DFG~a~~~~~-~~~~~---~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~~ 750 (766)
||+|||+|+.... ..+.. .||..|.|||....+. +|+|+|||||||+++|++||++|.+...
T Consensus 217 KlsDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~---------lt~KsDVySFGVvllElitgr~~~d~~~ 282 (361)
T KOG1187|consen 217 KLSDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGK---------LTEKSDVYSFGVVLLELITGRKAVDQSR 282 (361)
T ss_pred EccCccCcccCCccccceeeecCCCCccCChhhhccCC---------cCcccccccchHHHHHHHhCCcccCCCC
Confidence 9999999977654 33322 7899999999886543 6899999999999999999999987554
No 3
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=8.9e-46 Score=380.53 Aligned_cols=199 Identities=21% Similarity=0.288 Sum_probs=175.3
Q ss_pred HhCCCCccceeecCCcceEEEEE-EcCCcEEEEEEeeccccC---HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEE
Q 004248 532 ATGDFSDANLIKNGHSGDLFRGI-LEGGIPVVIKRIDLQSVK---TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFL 607 (766)
Q Consensus 532 ~~~~~~~~~~ig~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~---~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~l 607 (766)
..++|...+.||+|+||+||+|+ .+++..||||++.+.... .+-...|+++|++++|||||++++++.. ++.+|+
T Consensus 8 ~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~-~~~i~l 86 (429)
T KOG0595|consen 8 VVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIED-DDFIYL 86 (429)
T ss_pred ccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEec-CCeEEE
Confidence 34678888899999999999999 567899999999776422 5667899999999999999999996655 678999
Q ss_pred EEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCC------CcEEe
Q 004248 608 VYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDK------FEVRL 681 (766)
Q Consensus 608 V~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~------~~~kl 681 (766)
|||||.||||.++|++++. +++.+.+.++.|+|.||++||++ +||||||||.||||+.. -.+||
T Consensus 87 VMEyC~gGDLs~yi~~~~~-------l~e~t~r~Fm~QLA~alq~L~~~---~IiHRDLKPQNiLLs~~~~~~~~~~LKI 156 (429)
T KOG0595|consen 87 VMEYCNGGDLSDYIRRRGR-------LPEATARHFMQQLASALQFLHEN---NIIHRDLKPQNILLSTTARNDTSPVLKI 156 (429)
T ss_pred EEEeCCCCCHHHHHHHcCC-------CCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCcceEEeccCCCCCCCceEEe
Confidence 9999999999999998764 99999999999999999999998 99999999999999865 35899
Q ss_pred ccchhhhhcCC--CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCCc
Q 004248 682 GSLSEVCAQGG--DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSSR 750 (766)
Q Consensus 682 ~DFG~a~~~~~--~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~~ 750 (766)
+|||+||.... ...+.+|++.|||||++.... |+.|+|+||.|+|+|||++|+.||+...
T Consensus 157 ADFGfAR~L~~~~~a~tlcGSplYMAPEV~~~~~---------YdAKADLWSiG~Ilyq~l~g~~Pf~a~t 218 (429)
T KOG0595|consen 157 ADFGFARFLQPGSMAETLCGSPLYMAPEVIMSQQ---------YDAKADLWSIGTILYQCLTGKPPFDAET 218 (429)
T ss_pred cccchhhhCCchhHHHHhhCCccccCHHHHHhcc---------ccchhhHHHHHHHHHHHHhCCCCccccC
Confidence 99999998843 356789999999999987555 5789999999999999999999997443
No 4
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.7e-44 Score=376.36 Aligned_cols=213 Identities=23% Similarity=0.315 Sum_probs=186.3
Q ss_pred hCCCCccceeecCCcceEEEEE-EcCCcEEEEEEeeccccC---HHHHHHHHHHHhhcCCCCcccceeEEEec-CCcEEE
Q 004248 533 TGDFSDANLIKNGHSGDLFRGI-LEGGIPVVIKRIDLQSVK---TEAYLLELDFFSKVSHARLVPLLGHCMER-ENEKFL 607 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~---~~~~~~E~~~l~~l~H~niv~l~~~~~~~-~~~~~l 607 (766)
.+.|+.+++||+|.||.||||+ ..+|+.||+|+++.+..+ ..-..|||.||++++|||||+|.+...+. ...+||
T Consensus 116 ~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYl 195 (560)
T KOG0600|consen 116 ADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYL 195 (560)
T ss_pred hHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEE
Confidence 3457788999999999999999 788999999999876543 34568999999999999999999988775 357999
Q ss_pred EEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhh
Q 004248 608 VYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEV 687 (766)
Q Consensus 608 V~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a 687 (766)
|+|||+. ||..++...+ ..|++.+++.|+.|++.||+|+|++ +|+|||||.+|||||.+|.+||+|||+|
T Consensus 196 VFeYMdh-DL~GLl~~p~------vkft~~qIKc~mkQLl~Gl~~cH~~---gvlHRDIK~SNiLidn~G~LKiaDFGLA 265 (560)
T KOG0600|consen 196 VFEYMDH-DLSGLLSSPG------VKFTEPQIKCYMKQLLEGLEYCHSR---GVLHRDIKGSNILIDNNGVLKIADFGLA 265 (560)
T ss_pred EEecccc-hhhhhhcCCC------cccChHHHHHHHHHHHHHHHHHhhc---CeeeccccccceEEcCCCCEEeccccce
Confidence 9999997 9999886533 3599999999999999999999998 9999999999999999999999999999
Q ss_pred hhcCC----CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCCccccccceeeEEEE
Q 004248 688 CAQGG----DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSSRFGVKQQTTIIKLC 763 (766)
Q Consensus 688 ~~~~~----~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~ 763 (766)
+.+.. ..+..+.|.||+|||.+.+.+. |+.++|+||.|||+.||++|| |...++.+.+|+..|.|+|
T Consensus 266 r~y~~~~~~~~T~rVvTLWYRpPELLLG~t~--------Yg~aVDlWS~GCIl~El~~gk-PI~~G~tEveQl~kIfklc 336 (560)
T KOG0600|consen 266 RFYTPSGSAPYTSRVVTLWYRPPELLLGATS--------YGTAVDLWSVGCILAELFLGK-PILQGRTEVEQLHKIFKLC 336 (560)
T ss_pred eeccCCCCcccccceEEeeccChHHhcCCcc--------cccceeehhhhHHHHHHHcCC-CCcCCccHHHHHHHHHHHh
Confidence 97632 3567789999999999887664 688999999999999999999 5557788888999888887
Q ss_pred e
Q 004248 764 V 764 (766)
Q Consensus 764 ~ 764 (766)
.
T Consensus 337 G 337 (560)
T KOG0600|consen 337 G 337 (560)
T ss_pred C
Confidence 4
No 5
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=4.4e-43 Score=358.14 Aligned_cols=195 Identities=22% Similarity=0.243 Sum_probs=171.8
Q ss_pred CccceeecCCcceEEEEE-EcCCcEEEEEEeecccc--CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEeeCC
Q 004248 537 SDANLIKNGHSGDLFRGI-LEGGIPVVIKRIDLQSV--KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMP 613 (766)
Q Consensus 537 ~~~~~ig~G~~g~Vy~~~-~~~g~~vavK~l~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey~~ 613 (766)
+..+.||+|..|+|||++ ..+++.+|+|.+..... .++++.+|++++++.+||+||++||.|+...++++++||||+
T Consensus 82 e~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEYMD 161 (364)
T KOG0581|consen 82 ERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEYMD 161 (364)
T ss_pred hhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhhcC
Confidence 346799999999999999 56899999999954332 267899999999999999999999988764325999999999
Q ss_pred CCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhc-CC
Q 004248 614 NGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQ-GG 692 (766)
Q Consensus 614 ~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~-~~ 692 (766)
+|+|++++.+.+. +++...-+|+.+|++||.|||+. .+||||||||+|||++..|++||||||.++.+ ..
T Consensus 162 gGSLd~~~k~~g~-------i~E~~L~~ia~~VL~GL~YLh~~--~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS 232 (364)
T KOG0581|consen 162 GGSLDDILKRVGR-------IPEPVLGKIARAVLRGLSYLHEE--RKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS 232 (364)
T ss_pred CCCHHHHHhhcCC-------CCHHHHHHHHHHHHHHHHHHhhc--cCeeeccCCHHHeeeccCCCEEeccccccHHhhhh
Confidence 9999999976543 89999999999999999999963 39999999999999999999999999999876 44
Q ss_pred CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 693 DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 693 ~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
...+.+||..|||||.+.+..| +.++||||||++++|+++|+.|+...
T Consensus 233 ~a~tfvGT~~YMsPERi~g~~Y---------s~~sDIWSLGLsllE~a~GrfP~~~~ 280 (364)
T KOG0581|consen 233 IANTFVGTSAYMSPERISGESY---------SVKSDIWSLGLSLLELAIGRFPYPPP 280 (364)
T ss_pred hcccccccccccChhhhcCCcC---------CcccceecccHHHHHHhhCCCCCCCc
Confidence 5678899999999999987764 67899999999999999999999654
No 6
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-43 Score=358.91 Aligned_cols=198 Identities=19% Similarity=0.236 Sum_probs=175.5
Q ss_pred hCCCCccceeecCCcceEEEEE-EcCCcEEEEEEeeccccC----HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEE
Q 004248 533 TGDFSDANLIKNGHSGDLFRGI-LEGGIPVVIKRIDLQSVK----TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFL 607 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~----~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~l 607 (766)
.++|+..++||+|+||+||.++ .++++.+|+|.+++...- .+...+|..+|.+++||+||+++.. +++++.+|+
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ys-FQt~~kLyl 102 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYS-FQTEEKLYL 102 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEe-cccCCeEEE
Confidence 4679999999999999999998 567999999999765432 4578899999999999999999964 455778999
Q ss_pred EEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhh
Q 004248 608 VYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEV 687 (766)
Q Consensus 608 V~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a 687 (766)
|+||+.||+|..+|.+.+. +++.....++.+|+.||.|||+. +||||||||+|||||++|+++|+|||++
T Consensus 103 Vld~~~GGeLf~hL~~eg~-------F~E~~arfYlaEi~lAL~~LH~~---gIiyRDlKPENILLd~~GHi~LtDFgL~ 172 (357)
T KOG0598|consen 103 VLDYLNGGELFYHLQREGR-------FSEDRARFYLAEIVLALGYLHSK---GIIYRDLKPENILLDEQGHIKLTDFGLC 172 (357)
T ss_pred EEeccCCccHHHHHHhcCC-------cchhHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHeeecCCCcEEEeccccc
Confidence 9999999999999986654 89999999999999999999998 9999999999999999999999999999
Q ss_pred hhc---CCCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCCc
Q 004248 688 CAQ---GGDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSSR 750 (766)
Q Consensus 688 ~~~---~~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~~ 750 (766)
+.. +....+.+||+.|||||++.... ++..+|+||+||++|||+||.+||...+
T Consensus 173 k~~~~~~~~t~tfcGT~eYmAPEil~~~g---------y~~~vDWWsLGillYeML~G~pPF~~~~ 229 (357)
T KOG0598|consen 173 KEDLKDGDATRTFCGTPEYMAPEILLGKG---------YDKAVDWWSLGILLYEMLTGKPPFYAED 229 (357)
T ss_pred hhcccCCCccccccCCccccChHHHhcCC---------CCcccchHhHHHHHHHHhhCCCCCcCcc
Confidence 854 34456679999999999987764 4779999999999999999999996554
No 7
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=8.2e-43 Score=344.20 Aligned_cols=208 Identities=18% Similarity=0.208 Sum_probs=175.3
Q ss_pred CCCCccceeecCCcceEEEEE-EcCCcEEEEEEeeccccC---HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGI-LEGGIPVVIKRIDLQSVK---TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVY 609 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~---~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~ 609 (766)
+.|+...++|+|+||+|||++ .++|+.||||++..+... .+-.+||+++|++++|||+|.++.+|.. ...++||+
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrr-krklhLVF 80 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRR-KRKLHLVF 80 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHh-cceeEEEe
Confidence 357778899999999999999 678999999999655432 4567899999999999999999998876 56899999
Q ss_pred eeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhh
Q 004248 610 KYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCA 689 (766)
Q Consensus 610 Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~ 689 (766)
|||+. ++.+-|.+... .++....++|+.|+++|+.|+|++ ++|||||||+||||+.++.+|+||||+|+.
T Consensus 81 E~~dh-TvL~eLe~~p~------G~~~~~vk~~l~Q~l~ai~~cHk~---n~IHRDIKPENILit~~gvvKLCDFGFAR~ 150 (396)
T KOG0593|consen 81 EYCDH-TVLHELERYPN------GVPSELVKKYLYQLLKAIHFCHKN---NCIHRDIKPENILITQNGVVKLCDFGFART 150 (396)
T ss_pred eecch-HHHHHHHhccC------CCCHHHHHHHHHHHHHHhhhhhhc---CeecccCChhheEEecCCcEEeccchhhHh
Confidence 99997 55555544432 388899999999999999999998 999999999999999999999999999998
Q ss_pred cC---CCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCCccccccceeeEE
Q 004248 690 QG---GDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSSRFGVKQQTTIIK 761 (766)
Q Consensus 690 ~~---~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~~~~~~~~~~~~~ 761 (766)
.. +..+.++.|+||+|||.+.+.+. |+..+||||+||++.||+||. |..++++..+|+-.|.+
T Consensus 151 L~~pgd~YTDYVATRWYRaPELLvGDtq--------YG~pVDiWAiGCv~aEl~~G~-pL~PG~SDiDQLy~I~k 216 (396)
T KOG0593|consen 151 LSAPGDNYTDYVATRWYRAPELLVGDTQ--------YGKPVDIWAIGCVFAELLTGE-PLWPGRSDIDQLYLIRK 216 (396)
T ss_pred hcCCcchhhhhhhhhhccChhhhcccCc--------CCCcccchhhhHHHHHHhcCC-cCCCCcchHHHHHHHHH
Confidence 74 34567889999999999877442 567889999999999999999 56667776666655543
No 8
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.9e-42 Score=355.08 Aligned_cols=199 Identities=17% Similarity=0.199 Sum_probs=172.1
Q ss_pred CCCCccceeecCCcceEEEEE-EcCCcEEEEEEeeccccC--------HHHHHHHHHHHhhcCCCCcccceeEEEecCCc
Q 004248 534 GDFSDANLIKNGHSGDLFRGI-LEGGIPVVIKRIDLQSVK--------TEAYLLELDFFSKVSHARLVPLLGHCMERENE 604 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~--------~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 604 (766)
+.|...+.+|+|+||.|-+|+ ..+|+.||||.+.++... .....+|+++|++++|||||++++++.. ++.
T Consensus 172 d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~-~ds 250 (475)
T KOG0615|consen 172 DYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEV-PDS 250 (475)
T ss_pred ceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeec-CCc
Confidence 446778999999999999998 678999999999764322 2245799999999999999999997765 567
Q ss_pred EEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCC---CcEEe
Q 004248 605 KFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDK---FEVRL 681 (766)
Q Consensus 605 ~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~---~~~kl 681 (766)
.|+|||||+||+|.+.+-.++. +.+..-+.++.|++.|+.|||+. +|+||||||+|||+..+ ..+||
T Consensus 251 ~YmVlE~v~GGeLfd~vv~nk~-------l~ed~~K~~f~Qll~avkYLH~~---GI~HRDiKPeNILl~~~~e~~llKI 320 (475)
T KOG0615|consen 251 SYMVLEYVEGGELFDKVVANKY-------LREDLGKLLFKQLLTAVKYLHSQ---GIIHRDIKPENILLSNDAEDCLLKI 320 (475)
T ss_pred eEEEEEEecCccHHHHHHhccc-------cccchhHHHHHHHHHHHHHHHHc---CcccccCCcceEEeccCCcceEEEe
Confidence 8999999999999999976654 77778889999999999999998 99999999999999866 77999
Q ss_pred ccchhhhhcC--CCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 682 GSLSEVCAQG--GDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 682 ~DFG~a~~~~--~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
+|||+|+..+ .-..+.|||+.|.|||++....+.+ +..|+|+||+|||||-+++|.+||...
T Consensus 321 tDFGlAK~~g~~sfm~TlCGTpsYvAPEVl~~kg~~~------~~~kVDiWSlGcvLfvcLsG~pPFS~~ 384 (475)
T KOG0615|consen 321 TDFGLAKVSGEGSFMKTLCGTPSYVAPEVLASKGVEY------YPSKVDIWSLGCVLFVCLSGYPPFSEE 384 (475)
T ss_pred cccchhhccccceehhhhcCCccccChhheecCCeec------ccchheeeeccceEEEEeccCCCcccc
Confidence 9999999884 3467889999999999987665443 456999999999999999999999533
No 9
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-43 Score=367.99 Aligned_cols=211 Identities=18% Similarity=0.252 Sum_probs=187.3
Q ss_pred CCCCccceeecCCcceEEEEE-EcCCcEEEEEEeeccccCHHHH--HHHHHHHhhcC-CCCcccceeEEEecCCcEEEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGI-LEGGIPVVIKRIDLQSVKTEAY--LLELDFFSKVS-HARLVPLLGHCMERENEKFLVY 609 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~--~~E~~~l~~l~-H~niv~l~~~~~~~~~~~~lV~ 609 (766)
++|...+++|.|.||.||+|+ ..+|..||||+++..-...++. +||++.|++++ |||||++.+++.+.+..+|+||
T Consensus 10 ~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fVf 89 (538)
T KOG0661|consen 10 DRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFVF 89 (538)
T ss_pred HHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeeeH
Confidence 457778999999999999999 6789999999997665554443 68999999998 9999999999888655899999
Q ss_pred eeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhh
Q 004248 610 KYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCA 689 (766)
Q Consensus 610 Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~ 689 (766)
|||+. +|++++..++ ..+++.++..|+.||.+||+|+|.+ ++.|||+||+|||+.....+||+|||+||.
T Consensus 90 E~Md~-NLYqLmK~R~------r~fse~~irnim~QilqGL~hiHk~---GfFHRDlKPENiLi~~~~~iKiaDFGLARe 159 (538)
T KOG0661|consen 90 EFMDC-NLYQLMKDRN------RLFSESDIRNIMYQILQGLAHIHKH---GFFHRDLKPENILISGNDVIKIADFGLARE 159 (538)
T ss_pred Hhhhh-hHHHHHhhcC------CcCCHHHHHHHHHHHHHHHHHHHhc---CcccccCChhheEecccceeEecccccccc
Confidence 99985 9999998664 4699999999999999999999998 999999999999999999999999999998
Q ss_pred cC--CCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCCccccccceeeEEEEecC
Q 004248 690 QG--GDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSSRFGVKQQTTIIKLCVLL 766 (766)
Q Consensus 690 ~~--~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~ 766 (766)
+. .+.+.++.|+||+|||++....+ |+.++|+||+|||++|+++-++-| ++..+.++|.|||.+|
T Consensus 160 v~SkpPYTeYVSTRWYRAPEvLLrs~~--------Ys~pvD~wA~GcI~aEl~sLrPLF----PG~sE~Dqi~KIc~VL 226 (538)
T KOG0661|consen 160 VRSKPPYTEYVSTRWYRAPEVLLRSGY--------YSSPVDMWAVGCIMAELYSLRPLF----PGASEIDQIYKICEVL 226 (538)
T ss_pred cccCCCcchhhhcccccchHHhhhccc--------cCCchHHHHHHHHHHHHHHhcccC----CCCcHHHHHHHHHHHh
Confidence 84 45788999999999999876654 789999999999999999999766 7778888888888775
No 10
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=2.3e-42 Score=345.43 Aligned_cols=213 Identities=20% Similarity=0.266 Sum_probs=183.9
Q ss_pred HhCCCCccceeecCCcceEEEEE-EcCCcEEEEEEeeccccC---HHHHHHHHHHHhhcCCCCcccceeEEEecC-CcEE
Q 004248 532 ATGDFSDANLIKNGHSGDLFRGI-LEGGIPVVIKRIDLQSVK---TEAYLLELDFFSKVSHARLVPLLGHCMERE-NEKF 606 (766)
Q Consensus 532 ~~~~~~~~~~ig~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~---~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~~~ 606 (766)
..++|+..+.|++|+||.||+|+ .++++.||+|+++....+ .-.-+|||.+|.+++|||||.+..+..... +.+|
T Consensus 74 sv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy 153 (419)
T KOG0663|consen 74 SVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIY 153 (419)
T ss_pred cHHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceee
Confidence 34568889999999999999999 567999999999876533 235689999999999999999999776532 4699
Q ss_pred EEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchh
Q 004248 607 LVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSE 686 (766)
Q Consensus 607 lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~ 686 (766)
+|||||+. ||.++++..+ +++...+.+.++.|+++|++|||++ -|+|||||++|+|++..|.+||+|||+
T Consensus 154 ~VMe~~Eh-DLksl~d~m~------q~F~~~evK~L~~QlL~glk~lH~~---wilHRDLK~SNLLm~~~G~lKiaDFGL 223 (419)
T KOG0663|consen 154 IVMEYVEH-DLKSLMETMK------QPFLPGEVKTLMLQLLRGLKHLHDN---WILHRDLKTSNLLLSHKGILKIADFGL 223 (419)
T ss_pred eeHHHHHh-hHHHHHHhcc------CCCchHHHHHHHHHHHHHHHHHhhc---eeEecccchhheeeccCCcEEecccch
Confidence 99999996 9999998654 4589999999999999999999998 899999999999999999999999999
Q ss_pred hhhcCCC---CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCCccccccceeeEEEE
Q 004248 687 VCAQGGD---AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSSRFGVKQQTTIIKLC 763 (766)
Q Consensus 687 a~~~~~~---~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~ 763 (766)
||.++.. .+..+.|.||+|||.+.+... |++.+|+||+|||+.||++++ |.+++..+.+|++.|.+++
T Consensus 224 AR~ygsp~k~~T~lVVTLWYRaPELLLG~~t--------yst~iDMWSvGCI~aE~l~~k-Plf~G~sE~dQl~~If~ll 294 (419)
T KOG0663|consen 224 AREYGSPLKPYTPLVVTLWYRAPELLLGAKT--------YSTAVDMWSVGCIFAELLTQK-PLFPGKSEIDQLDKIFKLL 294 (419)
T ss_pred hhhhcCCcccCcceEEEeeecCHHHhcCCcc--------cCcchhhhhHHHHHHHHHhcC-CCCCCCchHHHHHHHHHHh
Confidence 9998765 677789999999998876543 689999999999999999999 5566777777777776554
No 11
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-41 Score=363.44 Aligned_cols=198 Identities=23% Similarity=0.343 Sum_probs=170.6
Q ss_pred cceeecCCcceEEEEEEcCCcEEEEEEeeccccC---HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEeeCCCC
Q 004248 539 ANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVK---TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNG 615 (766)
Q Consensus 539 ~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~---~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey~~~G 615 (766)
.+.+|+|+||+||+|.+.+...||||++...... .++|.+|+.+|.+++|||||+++|+|.+......+|||||++|
T Consensus 46 ~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~~G 125 (362)
T KOG0192|consen 46 EEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMPGG 125 (362)
T ss_pred hhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCCCC
Confidence 4559999999999999987767999999765433 4589999999999999999999999986433689999999999
Q ss_pred ChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCC-eEecCCCCCCeeeCCCC-cEEeccchhhhhcC--
Q 004248 616 DLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLP-FVHRDVQASSILLDDKF-EVRLGSLSEVCAQG-- 691 (766)
Q Consensus 616 sL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~-iiHrDlKp~NILl~~~~-~~kl~DFG~a~~~~-- 691 (766)
+|.+++++... ..++|..++.+|.|||+||.|||++ + ||||||||+|||++.++ ++||+|||+++...
T Consensus 126 sL~~~l~~~~~-----~~l~~~~~l~~aldiArGm~YLH~~---~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~ 197 (362)
T KOG0192|consen 126 SLSVLLHKKRK-----RKLPLKVRLRIALDIARGMEYLHSE---GPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVIS 197 (362)
T ss_pred cHHHHHhhccc-----CCCCHHHHHHHHHHHHHHHHHHhcC---CCeeecccChhhEEEcCCCCEEEECCCccceeeccc
Confidence 99999987411 3599999999999999999999998 5 99999999999999997 99999999998764
Q ss_pred -CCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCCcc
Q 004248 692 -GDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSSRF 751 (766)
Q Consensus 692 -~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~~~ 751 (766)
...+...||..|||||++... .. .+++|+|||||||++|||+||+.||.....
T Consensus 198 ~~~~~~~~GT~~wMAPEv~~~~-~~------~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~ 251 (362)
T KOG0192|consen 198 KTSMTSVAGTYRWMAPEVLRGE-KS------PYTEKSDVYSFGIVLWELLTGEIPFEDLAP 251 (362)
T ss_pred cccccCCCCCccccChhhhcCC-CC------cCCccchhhhHHHHHHHHHHCCCCCCCCCH
Confidence 334446899999999998754 11 169999999999999999999999965443
No 12
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=6.7e-42 Score=332.74 Aligned_cols=208 Identities=19% Similarity=0.303 Sum_probs=180.1
Q ss_pred CCCCccceeecCCcceEEEEE-EcCCcEEEEEEeeccccC---HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGI-LEGGIPVVIKRIDLQSVK---TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVY 609 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~---~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~ 609 (766)
++|...+++|+|.||.||+|+ ..+|+.||||+++....+ .....||++.|+.++|||||.+++++-. .+.+-+|+
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~-~~~l~lVf 80 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPH-KSNLSLVF 80 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccC-CCceEEEE
Confidence 357788999999999999999 678999999999876544 4578999999999999999999996654 56799999
Q ss_pred eeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhh
Q 004248 610 KYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCA 689 (766)
Q Consensus 610 Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~ 689 (766)
|||+. ||+.+|+.+. ..++-.+.+.++.++.+|++|||++ .|+||||||.|+|++++|.+||+|||+|+.
T Consensus 81 Efm~t-dLe~vIkd~~------i~l~pa~iK~y~~m~LkGl~y~H~~---~IlHRDlKPnNLLis~~g~lKiADFGLAr~ 150 (318)
T KOG0659|consen 81 EFMPT-DLEVVIKDKN------IILSPADIKSYMLMTLKGLAYCHSK---WILHRDLKPNNLLISSDGQLKIADFGLARF 150 (318)
T ss_pred Eeccc-cHHHHhcccc------cccCHHHHHHHHHHHHHHHHHHHhh---hhhcccCCccceEEcCCCcEEeecccchhc
Confidence 99996 9999997544 3689999999999999999999998 899999999999999999999999999998
Q ss_pred cCCC---CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCCccccccceeeEE
Q 004248 690 QGGD---AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSSRFGVKQQTTIIK 761 (766)
Q Consensus 690 ~~~~---~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~~~~~~~~~~~~~ 761 (766)
.+.+ .+..+.|+||+|||.+.+... |+..+|+||.|||+.||+-|. ||++++...+|+..|.+
T Consensus 151 f~~p~~~~~~~V~TRWYRAPELLfGsr~--------Yg~~VDmWavGCI~AELllr~-P~fpG~sDidQL~~If~ 216 (318)
T KOG0659|consen 151 FGSPNRIQTHQVVTRWYRAPELLFGSRQ--------YGTGVDMWAVGCIFAELLLRV-PFFPGDSDIDQLSKIFR 216 (318)
T ss_pred cCCCCcccccceeeeeccChHHhccchh--------cCCcchhhhHHHHHHHHHccC-CCCCCCchHHHHHHHHH
Confidence 8543 334478999999998876543 577899999999999999977 88877777777666544
No 13
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=7.1e-43 Score=341.37 Aligned_cols=202 Identities=19% Similarity=0.234 Sum_probs=174.0
Q ss_pred CCCccceeecCCcceEEEEE-EcCCcEEEEEEeeccccC---HHHHHHHHHHHhhcCCCCcccceeEEEecCCc-EEEEE
Q 004248 535 DFSDANLIKNGHSGDLFRGI-LEGGIPVVIKRIDLQSVK---TEAYLLELDFFSKVSHARLVPLLGHCMERENE-KFLVY 609 (766)
Q Consensus 535 ~~~~~~~ig~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~---~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~-~~lV~ 609 (766)
+|.+.++||+|+||+|||+. +.+|..||.|.+.-+... ++....|+.+|++++|||||+.+++-+..+++ +++||
T Consensus 20 ~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlnivm 99 (375)
T KOG0591|consen 20 DYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIVM 99 (375)
T ss_pred HHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHHH
Confidence 46778899999999999998 789999999999754433 56789999999999999999999855443455 89999
Q ss_pred eeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCC--eEecCCCCCCeeeCCCCcEEeccchhh
Q 004248 610 KYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLP--FVHRDVQASSILLDDKFEVRLGSLSEV 687 (766)
Q Consensus 610 Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~--iiHrDlKp~NILl~~~~~~kl~DFG~a 687 (766)
|||.+|||...|...+. ....+++...++++.|+++||.++|... ++ |+||||||.||+|+.+|.+|++|||++
T Consensus 100 E~c~~GDLsqmIk~~K~---qkr~ipE~~Vwk~f~QL~~AL~~cH~~~-~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~ 175 (375)
T KOG0591|consen 100 ELCDAGDLSQMIKHFKK---QKRLIPEKTVWKYFVQLCRALYHCHSKI-PRGTVMHRDIKPANIFLTANGVVKLGDFGLG 175 (375)
T ss_pred HhhcccCHHHHHHHHHh---ccccCchHHHHHHHHHHHHHHHHHhccc-cccceeeccCcchheEEcCCCceeeccchhH
Confidence 99999999999975332 2246999999999999999999999832 35 899999999999999999999999999
Q ss_pred hhcCCC---CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 688 CAQGGD---AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 688 ~~~~~~---~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
+....+ +++.+||++||+||.+.... |+.|+||||+||++|||+.-++||...
T Consensus 176 r~l~s~~tfA~S~VGTPyYMSPE~i~~~~---------Y~~kSDiWslGCllyEMcaL~~PF~g~ 231 (375)
T KOG0591|consen 176 RFLSSKTTFAHSLVGTPYYMSPERIHESG---------YNFKSDIWSLGCLLYEMCALQSPFYGD 231 (375)
T ss_pred hHhcchhHHHHhhcCCCcccCHHHHhcCC---------CCcchhHHHHHHHHHHHHhcCCCcccc
Confidence 988654 45679999999999886554 478999999999999999999999544
No 14
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6.1e-41 Score=361.03 Aligned_cols=196 Identities=16% Similarity=0.249 Sum_probs=176.0
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccc----cCHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQS----VKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLV 608 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~----~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV 608 (766)
..|...+.||+|+|+.||+++. .+|..||+|.+.+.. ..++...+||+|.++|+|||||+++++|.+ .+.+|+|
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FED-s~nVYiv 96 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFED-SNNVYIV 96 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeec-CCceEEE
Confidence 5688999999999999999995 899999999998743 337789999999999999999999996654 6789999
Q ss_pred EeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhh
Q 004248 609 YKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVC 688 (766)
Q Consensus 609 ~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~ 688 (766)
.|+|++|+|.+++.+++ ++++.+...+..||+.||.|||+. +|||||||-.|+++++++++||+|||+|.
T Consensus 97 LELC~~~sL~el~Krrk-------~ltEpEary~l~QIv~GlkYLH~~---~IiHRDLKLGNlfL~~~~~VKIgDFGLAt 166 (592)
T KOG0575|consen 97 LELCHRGSLMELLKRRK-------PLTEPEARYFLRQIVEGLKYLHSL---GIIHRDLKLGNLFLNENMNVKIGDFGLAT 166 (592)
T ss_pred EEecCCccHHHHHHhcC-------CCCcHHHHHHHHHHHHHHHHHHhc---CceecccchhheeecCcCcEEecccceee
Confidence 99999999999997543 499999999999999999999998 99999999999999999999999999998
Q ss_pred hcC---CCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 689 AQG---GDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 689 ~~~---~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
.+. +...+.+||+.|.|||+.....+ +..+||||+|||||-|++|++||...
T Consensus 167 ~le~~~Erk~TlCGTPNYIAPEVl~k~gH---------sfEvDiWSlGcvmYtLL~G~PPFetk 221 (592)
T KOG0575|consen 167 QLEYDGERKKTLCGTPNYIAPEVLNKSGH---------SFEVDIWSLGCVMYTLLVGRPPFETK 221 (592)
T ss_pred eecCcccccceecCCCcccChhHhccCCC---------CCchhhhhhhhHHHhhhhCCCCcccc
Confidence 774 44667899999999999875554 57889999999999999999999654
No 15
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=9.8e-42 Score=347.41 Aligned_cols=210 Identities=22% Similarity=0.269 Sum_probs=175.3
Q ss_pred CCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccCHHHHHHHHHHHhhcCCCCcccceeEEEecC-C---cEEEEE
Q 004248 535 DFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERE-N---EKFLVY 609 (766)
Q Consensus 535 ~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~---~~~lV~ 609 (766)
.|...+++|.|+||.||+|++ ++++.||||++-.+..-. -+|+++|++++|||||+|..+|.... + ...+||
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~k---nrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVl 101 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRYK---NRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVL 101 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCcC---cHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHH
Confidence 356679999999999999994 568999999986544322 26999999999999999998776432 2 245899
Q ss_pred eeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCC-CcEEeccchhhh
Q 004248 610 KYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDK-FEVRLGSLSEVC 688 (766)
Q Consensus 610 Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~-~~~kl~DFG~a~ 688 (766)
||||. +|.++++.... ..+.++...++-++.|+.+||+|||+. +|+||||||.|+|+|.+ |.+||||||.|+
T Consensus 102 eymP~-tL~~~~r~~~~---~~~~mp~~~iKLYt~Qlfrgl~yLh~~---~IcHRDIKPqNlLvD~~tg~LKicDFGSAK 174 (364)
T KOG0658|consen 102 EYMPE-TLYRVIRHYTR---ANQRMPLLEIKLYTYQLFRGLAYLHSH---GICHRDIKPQNLLVDPDTGVLKICDFGSAK 174 (364)
T ss_pred HhchH-HHHHHHHHHhh---cCCCCceeeeHHHHHHHHHHHHHHHhc---CcccCCCChheEEEcCCCCeEEeccCCcce
Confidence 99996 99999975311 123478888899999999999999997 99999999999999976 999999999999
Q ss_pred hc--CCCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCCccccccceeeEEEE
Q 004248 689 AQ--GGDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSSRFGVKQQTTIIKLC 763 (766)
Q Consensus 689 ~~--~~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~ 763 (766)
.. +.+..++..|++|+|||.+.+.+. ||.+.||||.|||+.||+-|+ |.++++.+.+|+..|.|++
T Consensus 175 ~L~~~epniSYicSRyYRaPELifga~~--------Yt~~IDiWSaGCV~aELl~g~-plFpG~s~~dQL~eIik~l 242 (364)
T KOG0658|consen 175 VLVKGEPNISYICSRYYRAPELIFGATE--------YTTSIDIWSAGCVMAELLKGQ-PLFPGDSSVDQLVEIIKVL 242 (364)
T ss_pred eeccCCCceeEEEeccccCHHHHcCccc--------cCceeEEhhhhHHHHHHhcCC-cccCCCCHHHHHHHHHHHh
Confidence 87 455677889999999999877654 799999999999999999999 5667788888888887765
No 16
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=7.9e-41 Score=329.82 Aligned_cols=198 Identities=20% Similarity=0.223 Sum_probs=179.0
Q ss_pred CCCCccceeecCCcceEEEEE-EcCCcEEEEEEeecccc----CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGI-LEGGIPVVIKRIDLQSV----KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLV 608 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~-~~~g~~vavK~l~~~~~----~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV 608 (766)
++|+..+.+|.|+||.|..++ ..+|..+|+|.++.... +.+...+|..+|+.+.||++|++++.|.+ .+.+|+|
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d-~~~lymv 122 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKD-NSNLYMV 122 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeecc-CCeEEEE
Confidence 467888999999999999998 56789999999977553 24578899999999999999999987766 5689999
Q ss_pred EeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhh
Q 004248 609 YKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVC 688 (766)
Q Consensus 609 ~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~ 688 (766)
|||++||.|.+++++.++ +++.....||.||+.||+|||+. .|++||+||+|||||.+|.+||+|||+|+
T Consensus 123 meyv~GGElFS~Lrk~~r-------F~e~~arFYAAeivlAleylH~~---~iiYRDLKPENiLlD~~G~iKitDFGFAK 192 (355)
T KOG0616|consen 123 MEYVPGGELFSYLRKSGR-------FSEPHARFYAAEIVLALEYLHSL---DIIYRDLKPENLLLDQNGHIKITDFGFAK 192 (355)
T ss_pred EeccCCccHHHHHHhcCC-------CCchhHHHHHHHHHHHHHHHHhc---CeeeccCChHHeeeccCCcEEEEeccceE
Confidence 999999999999987654 99999999999999999999998 99999999999999999999999999999
Q ss_pred hcCCCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCCcc
Q 004248 689 AQGGDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSSRF 751 (766)
Q Consensus 689 ~~~~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~~~ 751 (766)
...+.+.+-|||+.|.|||++....+| .++|+|||||++|||+.|.+||...+.
T Consensus 193 ~v~~rT~TlCGTPeYLAPEii~sk~yn---------kavDWWalGVLIYEMlaG~pPF~~~~~ 246 (355)
T KOG0616|consen 193 RVSGRTWTLCGTPEYLAPEIIQSKGYN---------KAVDWWALGVLIYEMLAGYPPFYDDNP 246 (355)
T ss_pred EecCcEEEecCCccccChHHhhcCCCC---------cchhHHHHHHHHHHHHcCCCCCcCCCh
Confidence 998888889999999999999877754 578999999999999999999976554
No 17
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=1e-39 Score=344.92 Aligned_cols=196 Identities=20% Similarity=0.235 Sum_probs=172.7
Q ss_pred CCCCccceeecCCcceEEEEE-EcCCcEEEEEEeeccccC---HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGI-LEGGIPVVIKRIDLQSVK---TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVY 609 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~---~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~ 609 (766)
++|...++||+|+||.||||+ ..+.+.||+|.+.+.... .+..++|++|+++++|||||.++++|.. ..++++|.
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt-~~~~~vVt 80 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFET-SAHLWVVT 80 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcc-cceEEEEe
Confidence 468888999999999999998 557899999999765443 3468899999999999999999996654 67899999
Q ss_pred eeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhh
Q 004248 610 KYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCA 689 (766)
Q Consensus 610 Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~ 689 (766)
|||.| +|+++|...+. +++++...|+.+++.||.|||+. +|+|||+||.|||++..|.+|+||||+|+.
T Consensus 81 e~a~g-~L~~il~~d~~-------lpEe~v~~~a~~LVsaL~yLhs~---rilhrd~kPqniLl~~~~~~KlcdFg~Ar~ 149 (808)
T KOG0597|consen 81 EYAVG-DLFTILEQDGK-------LPEEQVRAIAYDLVSALYYLHSN---RILHRDMKPQNILLEKGGTLKLCDFGLARA 149 (808)
T ss_pred hhhhh-hHHHHHHhccC-------CCHHHHHHHHHHHHHHHHHHHhc---CcccccCCcceeeecCCCceeechhhhhhh
Confidence 99986 99999986654 99999999999999999999998 999999999999999999999999999998
Q ss_pred cCCCC---ccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCCc
Q 004248 690 QGGDA---HQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSSR 750 (766)
Q Consensus 690 ~~~~~---~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~~ 750 (766)
..... +...||+.|||||...... |+..+|.||+|||+|||++|++||+..+
T Consensus 150 m~~~t~vltsikGtPlYmAPElv~e~p---------yd~~sDlWslGcilYE~~~G~PPF~a~s 204 (808)
T KOG0597|consen 150 MSTNTSVLTSIKGTPLYMAPELVEEQP---------YDHTSDLWSLGCILYELYVGQPPFYARS 204 (808)
T ss_pred cccCceeeeeccCcccccCHHHHcCCC---------ccchhhHHHHHHHHHHHhcCCCCchHHH
Confidence 75432 3457999999999988655 4678999999999999999999996544
No 18
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4e-39 Score=344.09 Aligned_cols=193 Identities=25% Similarity=0.412 Sum_probs=168.6
Q ss_pred CccceeecCCcceEEEEEEcCCcEEEEEEeeccccCHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEeeCCCCC
Q 004248 537 SDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGD 616 (766)
Q Consensus 537 ~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey~~~Gs 616 (766)
...+.||+|-||+||.|.+.....||||.++......++|.+|+++|++++|+|||+++|+|.. ++.+|||||||+.|+
T Consensus 209 ~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~-~~piyIVtE~m~~Gs 287 (468)
T KOG0197|consen 209 KLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGSMSPEAFLREAQIMKKLRHEKLVKLYGVCTK-QEPIYIVTEYMPKGS 287 (468)
T ss_pred HHHHHhcCCccceEEEEEEcCCCcccceEEeccccChhHHHHHHHHHHhCcccCeEEEEEEEec-CCceEEEEEecccCc
Confidence 3468899999999999999988899999999887778999999999999999999999999986 457999999999999
Q ss_pred hhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcCCCCc-
Q 004248 617 LSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAH- 695 (766)
Q Consensus 617 L~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~~~~~- 695 (766)
|.++|+...+ ..+.-.+.+.++.|||+||+||+++ ++|||||.++|||++++..+||+|||+||...++..
T Consensus 288 Ll~yLr~~~~-----~~l~~~~Ll~~a~qIaeGM~YLes~---~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~ 359 (468)
T KOG0197|consen 288 LLDYLRTREG-----GLLNLPQLLDFAAQIAEGMAYLESK---NYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYT 359 (468)
T ss_pred HHHHhhhcCC-----CccchHHHHHHHHHHHHHHHHHHhC---CccchhhhhhheeeccCceEEEcccccccccCCCcee
Confidence 9999986332 4588999999999999999999998 999999999999999999999999999996644322
Q ss_pred ccee---eecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCC
Q 004248 696 QSRI---TRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNL 747 (766)
Q Consensus 696 ~~~~---t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~ 747 (766)
...+ -.-+.|||.+..+. ++.|||||||||+|+||+| |+.|+.
T Consensus 360 ~~~~~kfPIkWtAPEa~~~~~---------FS~kSDVWSFGVlL~E~fT~G~~py~ 406 (468)
T KOG0197|consen 360 ASEGGKFPIKWTAPEALNYGK---------FSSKSDVWSFGVLLWELFTYGRVPYP 406 (468)
T ss_pred ecCCCCCCceecCHHHHhhCC---------cccccceeehhhhHHHHhccCCCCCC
Confidence 2222 22467999886554 6899999999999999999 888873
No 19
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=1.1e-38 Score=338.31 Aligned_cols=201 Identities=17% Similarity=0.180 Sum_probs=174.4
Q ss_pred HhCCCCccceeecCCcceEEEEE-EcCCcEEEEEEeeccccC----HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEE
Q 004248 532 ATGDFSDANLIKNGHSGDLFRGI-LEGGIPVVIKRIDLQSVK----TEAYLLELDFFSKVSHARLVPLLGHCMERENEKF 606 (766)
Q Consensus 532 ~~~~~~~~~~ig~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~----~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~ 606 (766)
..+||+...+||+|+||.||.|+ ..+|..+|+|++++...- .+..+.|-.+|....+|+||+|+..| ++.+.+|
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsF-QD~~~LY 217 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSF-QDKEYLY 217 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEe-cCCCeeE
Confidence 56789999999999999999998 677999999999876542 46788999999999999999999655 4467899
Q ss_pred EEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchh
Q 004248 607 LVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSE 686 (766)
Q Consensus 607 lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~ 686 (766)
|||||+||||+..+|.+.+. |++.....|+.+++.|++-+|.. ++|||||||+|+|||..|++||+|||+
T Consensus 218 LiMEylPGGD~mTLL~~~~~-------L~e~~arfYiaE~vlAI~~iH~~---gyIHRDIKPdNlLiD~~GHiKLSDFGL 287 (550)
T KOG0605|consen 218 LIMEYLPGGDMMTLLMRKDT-------LTEDWARFYIAETVLAIESIHQL---GYIHRDIKPDNLLIDAKGHIKLSDFGL 287 (550)
T ss_pred EEEEecCCccHHHHHHhcCc-------CchHHHHHHHHHHHHHHHHHHHc---CcccccCChhheeecCCCCEeeccccc
Confidence 99999999999999987654 89999999999999999999998 999999999999999999999999999
Q ss_pred hhhcCC-------------------------C-----C--------------------ccceeeecccCCCCCCCCceee
Q 004248 687 VCAQGG-------------------------D-----A--------------------HQSRITRLLRLPQSSEQGSSGM 716 (766)
Q Consensus 687 a~~~~~-------------------------~-----~--------------------~~~~~t~~y~aPe~~~~~~~g~ 716 (766)
+..... . . ...+||+-|+|||++.+..|
T Consensus 288 s~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY-- 365 (550)
T KOG0605|consen 288 STGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGY-- 365 (550)
T ss_pred cchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCC--
Confidence 852200 0 0 02478999999999987664
Q ss_pred eeeeeecccccceecchHHHHHHhcCCCCCCCCccc
Q 004248 717 VIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSSRFG 752 (766)
Q Consensus 717 ~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~~~~ 752 (766)
+..+|+||+|||+|||+.|.+||.+.++.
T Consensus 366 -------~~~cDwWSLG~ImyEmLvGyPPF~s~tp~ 394 (550)
T KOG0605|consen 366 -------GKECDWWSLGCIMYEMLVGYPPFCSETPQ 394 (550)
T ss_pred -------CccccHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 57899999999999999999999766554
No 20
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=1e-38 Score=326.24 Aligned_cols=214 Identities=19% Similarity=0.258 Sum_probs=178.9
Q ss_pred CCCCccceeecCCcceEEEEE-EcCCcEEEEEEeeccccC---HHHHHHHHHHHhhcCCCC-cccceeEEEecCC-----
Q 004248 534 GDFSDANLIKNGHSGDLFRGI-LEGGIPVVIKRIDLQSVK---TEAYLLELDFFSKVSHAR-LVPLLGHCMEREN----- 603 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~---~~~~~~E~~~l~~l~H~n-iv~l~~~~~~~~~----- 603 (766)
..|+..++||+|+||+||+|+ ..+|+.||+|+++..... .....||+.++++++|+| ||++++++...+.
T Consensus 11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~ 90 (323)
T KOG0594|consen 11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIG 90 (323)
T ss_pred HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccc
Confidence 346667889999999999999 678999999999876542 445789999999999999 9999998876432
Q ss_pred cEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEecc
Q 004248 604 EKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGS 683 (766)
Q Consensus 604 ~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~D 683 (766)
..++|+||++. ||.+++....... ..++-..++.++.|+++||+|||++ +|+||||||.||||+++|.+||+|
T Consensus 91 ~l~lvfe~~d~-DL~~ymd~~~~~~---~g~~~~~ik~~m~Qll~gl~~~H~~---~IlHRDLKPQNlLi~~~G~lKlaD 163 (323)
T KOG0594|consen 91 KLYLVFEFLDR-DLKKYMDSLPKKP---QGLPPRLIKSFMRQLLRGLAFLHSH---GILHRDLKPQNLLISSSGVLKLAD 163 (323)
T ss_pred eEEEEEEeecc-cHHHHHHhccccc---cCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCcceEEECCCCcEeeec
Confidence 78999999986 9999997654211 2466788999999999999999998 999999999999999999999999
Q ss_pred chhhhhcC---CCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCCccccccceeeE
Q 004248 684 LSEVCAQG---GDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSSRFGVKQQTTII 760 (766)
Q Consensus 684 FG~a~~~~---~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~~~~~~~~~~~~ 760 (766)
||+|+... ...+..++|.+|+|||++.+.+. |++..||||+|||++||++++ |.+++....+|+..|.
T Consensus 164 FGlAra~~ip~~~yt~evvTlWYRaPEvLlGs~~--------Ys~~vDiWs~GcIfaEm~~~~-~LFpG~se~~ql~~If 234 (323)
T KOG0594|consen 164 FGLARAFSIPMRTYTPEVVTLWYRAPEVLLGSTS--------YSTSVDIWSLGCIFAEMFTRR-PLFPGDSEIDQLFRIF 234 (323)
T ss_pred cchHHHhcCCcccccccEEEeeccCHHHhcCCCc--------CCCCcchHhHHHHHHHHHhCC-CCCCCCcHHHHHHHHH
Confidence 99999764 23566789999999999877654 688999999999999999977 5556666666666665
Q ss_pred EEE
Q 004248 761 KLC 763 (766)
Q Consensus 761 ~~~ 763 (766)
+++
T Consensus 235 ~~l 237 (323)
T KOG0594|consen 235 RLL 237 (323)
T ss_pred HHc
Confidence 443
No 21
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=8.4e-39 Score=338.67 Aligned_cols=198 Identities=18% Similarity=0.233 Sum_probs=171.5
Q ss_pred HHhCCCCccceeecCCcceEEEEE-EcCCcEEEEEEeeccccC----HHHHHHHHHHHhhc-CCCCcccceeEEEecCCc
Q 004248 531 AATGDFSDANLIKNGHSGDLFRGI-LEGGIPVVIKRIDLQSVK----TEAYLLELDFFSKV-SHARLVPLLGHCMERENE 604 (766)
Q Consensus 531 ~~~~~~~~~~~ig~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~----~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~ 604 (766)
+..+||...+.||+|+|++||+|+ ..+++.+|||++.++..- .+-..+|-++|.+| .||.||+|+..|.+ +..
T Consensus 70 k~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD-~~s 148 (604)
T KOG0592|consen 70 KTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQD-EES 148 (604)
T ss_pred CChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeec-ccc
Confidence 345678889999999999999998 678999999999765432 33467799999999 89999999975544 668
Q ss_pred EEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccc
Q 004248 605 KFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684 (766)
Q Consensus 605 ~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DF 684 (766)
+|+|+||+++|+|.++|++.+. +++.....+|.+|+.||+|||++ +||||||||+|||+|+||++||+||
T Consensus 149 LYFvLe~A~nGdll~~i~K~Gs-------fde~caR~YAAeIldAleylH~~---GIIHRDlKPENILLd~dmhikITDF 218 (604)
T KOG0592|consen 149 LYFVLEYAPNGDLLDLIKKYGS-------FDETCARFYAAEILDALEYLHSN---GIIHRDLKPENILLDKDGHIKITDF 218 (604)
T ss_pred eEEEEEecCCCcHHHHHHHhCc-------chHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeEcCCCcEEEeec
Confidence 9999999999999999988764 89999999999999999999998 9999999999999999999999999
Q ss_pred hhhhhcCC--------------C--CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 685 SEVCAQGG--------------D--AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 685 G~a~~~~~--------------~--~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
|.|+.+.+ . ....+||..|.+||.+.... .+..+|+|+||||+|.|+.|++||..
T Consensus 219 GsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~---------~~~~sDiWAlGCilyQmlaG~PPFra 289 (604)
T KOG0592|consen 219 GSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSP---------AGPSSDLWALGCILYQMLAGQPPFRA 289 (604)
T ss_pred cccccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCC---------CCcccchHHHHHHHHHHhcCCCCCcc
Confidence 99987521 1 13478999999999987665 45789999999999999999999943
No 22
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.8e-39 Score=326.57 Aligned_cols=211 Identities=21% Similarity=0.266 Sum_probs=176.9
Q ss_pred HhCCCCccceeecCCcceEEEEE-EcCCcEEEEEEeec---cccCHHHHHHHHHHHhhcCCCCcccceeEEEe----cCC
Q 004248 532 ATGDFSDANLIKNGHSGDLFRGI-LEGGIPVVIKRIDL---QSVKTEAYLLELDFFSKVSHARLVPLLGHCME----REN 603 (766)
Q Consensus 532 ~~~~~~~~~~ig~G~~g~Vy~~~-~~~g~~vavK~l~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~----~~~ 603 (766)
....|...+.||+|+||.|..|+ ..+|+.||||++.. .....++-.||+++|+.++|+|||.+.+.+.. .-+
T Consensus 20 i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~ 99 (359)
T KOG0660|consen 20 IPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFN 99 (359)
T ss_pred ccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccc
Confidence 34566668999999999999998 57899999999963 22236788999999999999999999997754 224
Q ss_pred cEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEecc
Q 004248 604 EKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGS 683 (766)
Q Consensus 604 ~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~D 683 (766)
.+|+|+|+|+. ||...|+.++ .++......+..|+.+||.|+|+. +|+|||+||+|+|++.+...||+|
T Consensus 100 DvYiV~elMet-DL~~iik~~~-------~L~d~H~q~f~YQiLrgLKyiHSA---nViHRDLKPsNll~n~~c~lKI~D 168 (359)
T KOG0660|consen 100 DVYLVFELMET-DLHQIIKSQQ-------DLTDDHAQYFLYQILRGLKYIHSA---NVIHRDLKPSNLLLNADCDLKICD 168 (359)
T ss_pred eeEEehhHHhh-HHHHHHHcCc-------cccHHHHHHHHHHHHHhcchhhcc---cccccccchhheeeccCCCEEecc
Confidence 69999999964 9999997653 388999999999999999999998 999999999999999999999999
Q ss_pred chhhhhcC-----CCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCCcccccccee
Q 004248 684 LSEVCAQG-----GDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSSRFGVKQQTT 758 (766)
Q Consensus 684 FG~a~~~~-----~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~~~~~~~~~~ 758 (766)
||+|+... +..+.++.|+||+|||.+..... ||..+||||.|||+.||++||+-| ++....+|+..
T Consensus 169 FGLAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~--------Yt~aiDiWSvGCI~AEmL~gkplF-pG~d~v~Ql~l 239 (359)
T KOG0660|consen 169 FGLARYLDKFFEDGFMTEYVATRWYRAPELLLNSSE--------YTKAIDIWSVGCILAEMLTGKPLF-PGKDYVHQLQL 239 (359)
T ss_pred ccceeeccccCcccchhcceeeeeecCHHHHhcccc--------ccchhhhhhhhHHHHHHHcCCCCC-CCCchHHHHHH
Confidence 99999873 44578899999999998865432 789999999999999999999555 45555555555
Q ss_pred eEEE
Q 004248 759 IIKL 762 (766)
Q Consensus 759 ~~~~ 762 (766)
|.++
T Consensus 240 I~~~ 243 (359)
T KOG0660|consen 240 ILEL 243 (359)
T ss_pred HHHh
Confidence 5443
No 23
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.2e-38 Score=338.81 Aligned_cols=200 Identities=19% Similarity=0.210 Sum_probs=174.8
Q ss_pred HhCCCCccceeecCCcceEEEEE-EcCCcEEEEEEeecc----cc--CHHHHHHHHHHHhhcC-CCCcccceeEEEecCC
Q 004248 532 ATGDFSDANLIKNGHSGDLFRGI-LEGGIPVVIKRIDLQ----SV--KTEAYLLELDFFSKVS-HARLVPLLGHCMEREN 603 (766)
Q Consensus 532 ~~~~~~~~~~ig~G~~g~Vy~~~-~~~g~~vavK~l~~~----~~--~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~ 603 (766)
..+.|...+.||+|+||+||.|. ..+|..||||.++.. .. ..+.+.+|+.++++++ ||||+++++++.. ..
T Consensus 15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t-~~ 93 (370)
T KOG0583|consen 15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFAT-PT 93 (370)
T ss_pred ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEec-CC
Confidence 45678999999999999999998 567899999977653 11 2446778999999999 9999999997765 56
Q ss_pred cEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCC-CcEEec
Q 004248 604 EKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDK-FEVRLG 682 (766)
Q Consensus 604 ~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~-~~~kl~ 682 (766)
.+|+||||+.+|+|.+++.+++ .+.+....+++.|++.|++|+|++ +|+||||||+|||+|.+ +++||+
T Consensus 94 ~~~ivmEy~~gGdL~~~i~~~g-------~l~E~~ar~~F~Qlisav~y~H~~---gi~HRDLK~ENilld~~~~~~Kl~ 163 (370)
T KOG0583|consen 94 KIYIVMEYCSGGDLFDYIVNKG-------RLKEDEARKYFRQLISAVAYCHSR---GIVHRDLKPENILLDGNEGNLKLS 163 (370)
T ss_pred eEEEEEEecCCccHHHHHHHcC-------CCChHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEecCCCCCEEEe
Confidence 7999999999999999998744 388899999999999999999998 99999999999999999 999999
Q ss_pred cchhhhhc---CCCCccceeeecccCCCCCCCCc-eeeeeeeeecccccceecchHHHHHHhcCCCCCCCCc
Q 004248 683 SLSEVCAQ---GGDAHQSRITRLLRLPQSSEQGS-SGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSSR 750 (766)
Q Consensus 683 DFG~a~~~---~~~~~~~~~t~~y~aPe~~~~~~-~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~~ 750 (766)
|||++... +....+.+||+.|+|||.+.... | -+.++||||+||+||.|++|+.||++.+
T Consensus 164 DFG~s~~~~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y--------~g~~aDvWS~GViLy~ml~G~~PF~d~~ 227 (370)
T KOG0583|consen 164 DFGLSAISPGEDGLLKTFCGSPAYAAPEVLSGKGTY--------SGKAADVWSLGVILYVLLCGRLPFDDSN 227 (370)
T ss_pred ccccccccCCCCCcccCCCCCcccCCHHHhCCCCCc--------CCchhhhhhhHHHHHHHHhCCCCCCCcc
Confidence 99999876 34567889999999999987654 4 2579999999999999999999997643
No 24
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=4.3e-38 Score=351.64 Aligned_cols=201 Identities=21% Similarity=0.314 Sum_probs=168.6
Q ss_pred CCCccceeecCCcceEEEEEE------cCCcEEEEEEeeccccC--HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEE
Q 004248 535 DFSDANLIKNGHSGDLFRGIL------EGGIPVVIKRIDLQSVK--TEAYLLELDFFSKVSHARLVPLLGHCMERENEKF 606 (766)
Q Consensus 535 ~~~~~~~ig~G~~g~Vy~~~~------~~g~~vavK~l~~~~~~--~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~ 606 (766)
+.+..+.||+|+||+||+|+. ++.+.||||.++..... +++|+||+++|++++|||||+|+|.|.+ ++..+
T Consensus 487 ~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~-~~P~~ 565 (774)
T KOG1026|consen 487 DIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCRE-GDPLC 565 (774)
T ss_pred heeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEcc-CCeeE
Confidence 345568899999999999984 23578999999765443 6799999999999999999999999987 56899
Q ss_pred EEEeeCCCCChhhhhhccCCCC---Cc----CCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcE
Q 004248 607 LVYKYMPNGDLSSSLYRKTNTE---DD----LQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEV 679 (766)
Q Consensus 607 lV~Ey~~~GsL~~~l~~~~~~~---~~----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~ 679 (766)
+|+|||..|||.++|+.+.... .. ..+++..+.+.||.|||.||+||-++ .+|||||..+|+||.++..+
T Consensus 566 MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~---~FVHRDLATRNCLVge~l~V 642 (774)
T KOG1026|consen 566 MVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSH---HFVHRDLATRNCLVGENLVV 642 (774)
T ss_pred EEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---cccccchhhhhceeccceEE
Confidence 9999999999999997543211 11 23489999999999999999999988 89999999999999999999
Q ss_pred EeccchhhhhcCCCC-c----cceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCC
Q 004248 680 RLGSLSEVCAQGGDA-H----QSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLS 748 (766)
Q Consensus 680 kl~DFG~a~~~~~~~-~----~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~ 748 (766)
||+|||++|...... . ....-..||+||.+..+. +|++||||||||||||+.| |+.|+..
T Consensus 643 KIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~k---------FTteSDVWs~GVvLWEIFsyG~QPy~g 708 (774)
T KOG1026|consen 643 KISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGK---------FTTESDVWSFGVVLWEIFSYGKQPYYG 708 (774)
T ss_pred EecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCc---------ccchhhhhhhhhhhhhhhccccCcccc
Confidence 999999999763221 1 122344689999987655 6999999999999999998 9999953
No 25
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=7.7e-38 Score=325.82 Aligned_cols=197 Identities=22% Similarity=0.315 Sum_probs=167.9
Q ss_pred CCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC-HHHHHHHHHHHhhcCCCCcccceeEEEecCC-cEEEEEee
Q 004248 535 DFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK-TEAYLLELDFFSKVSHARLVPLLGHCMEREN-EKFLVYKY 611 (766)
Q Consensus 535 ~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~-~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~-~~~lV~Ey 611 (766)
++...+.||+|+||.||.+.. ++|...|||.+...... .+.+.+|+++|.+++|||||+.+|.....++ .+++.|||
T Consensus 18 ~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mEy 97 (313)
T KOG0198|consen 18 NWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFMEY 97 (313)
T ss_pred hhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeeec
Confidence 456678999999999999995 55999999999765322 4668999999999999999999996444343 68999999
Q ss_pred CCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCC-CCcEEeccchhhhhc
Q 004248 612 MPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDD-KFEVRLGSLSEVCAQ 690 (766)
Q Consensus 612 ~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~-~~~~kl~DFG~a~~~ 690 (766)
+++|+|.+++.+.++ .+++...+.++.||++||+|||++ +||||||||+|||++. ++.+||+|||+++..
T Consensus 98 ~~~GsL~~~~~~~g~------~l~E~~v~~ytr~iL~GL~ylHs~---g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~ 168 (313)
T KOG0198|consen 98 APGGSLSDLIKRYGG------KLPEPLVRRYTRQILEGLAYLHSK---GIVHCDIKPANILLDPSNGDVKLADFGLAKKL 168 (313)
T ss_pred cCCCcHHHHHHHcCC------CCCHHHHHHHHHHHHHHHHHHHhC---CEeccCcccceEEEeCCCCeEEeccCcccccc
Confidence 999999999987642 399999999999999999999998 9999999999999999 799999999999866
Q ss_pred CC------CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 691 GG------DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 691 ~~------~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
.. ......||+.|||||++..+.. ...++||||+||++.||+||++||..
T Consensus 169 ~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~--------~~~~sDiWSlGCtVvEM~Tg~~PW~~ 224 (313)
T KOG0198|consen 169 ESKGTKSDSELSVQGTPNYMAPEVIRNGEV--------ARRESDIWSLGCTVVEMLTGKPPWSE 224 (313)
T ss_pred ccccccccccccccCCccccCchhhcCCCc--------CCccchhhhcCCEEEeccCCCCcchh
Confidence 42 2335689999999999875321 23589999999999999999999853
No 26
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.1e-38 Score=334.37 Aligned_cols=195 Identities=21% Similarity=0.287 Sum_probs=174.4
Q ss_pred CCCCccceeecCCcceEEEEE-EcCCcEEEEEEeeccccC-HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEee
Q 004248 534 GDFSDANLIKNGHSGDLFRGI-LEGGIPVVIKRIDLQSVK-TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKY 611 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~-~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey 611 (766)
..|....+||+|+.|.||.|. ..+++.||||++...... ++-..+|+.+|+..+|+|||.+++.|.. .+++|+||||
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv-~deLWVVMEy 351 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLV-GDELWVVMEY 351 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcc-cceeEEEEee
Confidence 347778899999999999998 677899999999887766 5567899999999999999999998776 4689999999
Q ss_pred CCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcC
Q 004248 612 MPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQG 691 (766)
Q Consensus 612 ~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~ 691 (766)
|+||+|-+++... .+++.++..|+.++++||+|||.+ +|||||||++|||++.+|.+||+|||++..+.
T Consensus 352 m~ggsLTDvVt~~--------~~~E~qIA~Icre~l~aL~fLH~~---gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~ 420 (550)
T KOG0578|consen 352 MEGGSLTDVVTKT--------RMTEGQIAAICREILQGLKFLHAR---GIIHRDIKSDNILLTMDGSVKLTDFGFCAQIS 420 (550)
T ss_pred cCCCchhhhhhcc--------cccHHHHHHHHHHHHHHHHHHHhc---ceeeeccccceeEeccCCcEEEeeeeeeeccc
Confidence 9999999998643 389999999999999999999998 99999999999999999999999999998763
Q ss_pred C---CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 692 G---DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 692 ~---~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
. ...+.+||++|||||++....| ++|+||||||+++.||+-|.+||..+
T Consensus 421 ~~~~KR~TmVGTPYWMAPEVvtrk~Y---------G~KVDIWSLGIMaIEMveGEPPYlnE 472 (550)
T KOG0578|consen 421 EEQSKRSTMVGTPYWMAPEVVTRKPY---------GPKVDIWSLGIMAIEMVEGEPPYLNE 472 (550)
T ss_pred cccCccccccCCCCccchhhhhhccc---------CccccchhhhhHHHHHhcCCCCccCC
Confidence 2 4566789999999999987775 57999999999999999999999653
No 27
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.9e-38 Score=303.30 Aligned_cols=200 Identities=17% Similarity=0.212 Sum_probs=176.9
Q ss_pred hCCCCccceeecCCcceEEEEE-EcCCcEEEEEEeeccccC----HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEE
Q 004248 533 TGDFSDANLIKNGHSGDLFRGI-LEGGIPVVIKRIDLQSVK----TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFL 607 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~----~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~l 607 (766)
.++|+..+.+|+|.||.||.|+ .+++-.||+|++.+.+.. .++++||++|-+.++||||.++|+|+.+ +...||
T Consensus 21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd-~~riyL 99 (281)
T KOG0580|consen 21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHD-SKRIYL 99 (281)
T ss_pred hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheec-cceeEE
Confidence 3578999999999999999999 667889999999765542 5679999999999999999999998887 568999
Q ss_pred EEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhh
Q 004248 608 VYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEV 687 (766)
Q Consensus 608 V~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a 687 (766)
++||.++|++...|+.++. ..+++.....|+.|+|.||.|+|.. +||||||||+|+|++.++..||+|||-+
T Consensus 100 ilEya~~gel~k~L~~~~~-----~~f~e~~~a~Yi~q~A~Al~y~h~k---~VIhRdiKpenlLlg~~~~lkiAdfGws 171 (281)
T KOG0580|consen 100 ILEYAPRGELYKDLQEGRM-----KRFDEQRAATYIKQLANALLYCHLK---RVIHRDIKPENLLLGSAGELKIADFGWS 171 (281)
T ss_pred EEEecCCchHHHHHHhccc-----ccccccchhHHHHHHHHHHHHhccC---CcccCCCCHHHhccCCCCCeeccCCCce
Confidence 9999999999999985443 3488888899999999999999997 9999999999999999999999999987
Q ss_pred hhc-CCCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCCc
Q 004248 688 CAQ-GGDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSSR 750 (766)
Q Consensus 688 ~~~-~~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~~ 750 (766)
... .....+.+||..|.+||...+..+ +.++|+|++||..||++.|.+||.+..
T Consensus 172 V~~p~~kR~tlcgt~dyl~pEmv~~~~h---------d~~Vd~w~lgvl~yeflvg~ppFes~~ 226 (281)
T KOG0580|consen 172 VHAPSNKRKTLCGTLDYLPPEMVEGRGH---------DKFVDLWSLGVLCYEFLVGLPPFESQS 226 (281)
T ss_pred eecCCCCceeeecccccCCHhhcCCCCc---------cchhhHHHHHHHHHHHHhcCCchhhhh
Confidence 665 445667899999999999887664 779999999999999999999996554
No 28
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-37 Score=338.31 Aligned_cols=194 Identities=20% Similarity=0.260 Sum_probs=170.7
Q ss_pred hCCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC----HHHHHHHHHHHhhc-CCCCcccceeEEEecCCcEE
Q 004248 533 TGDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK----TEAYLLELDFFSKV-SHARLVPLLGHCMERENEKF 606 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~----~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~~ 606 (766)
.++|....++|+|+||+|+.|.. .+++.+|||.++++..- .+....|.+|+.-. +||.++.++. |+++.+++|
T Consensus 367 l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~-~fQT~~~l~ 445 (694)
T KOG0694|consen 367 LDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFS-CFQTKEHLF 445 (694)
T ss_pred ccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeeccc-ccccCCeEE
Confidence 46788999999999999999994 56889999999876542 45678888888877 5999999998 667778999
Q ss_pred EEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchh
Q 004248 607 LVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSE 686 (766)
Q Consensus 607 lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~ 686 (766)
+||||+.|||+..+.+. ..+++.+...||.+|+.||.|||++ +|||||||-+|||||.+|++||+|||+
T Consensus 446 fvmey~~Ggdm~~~~~~--------~~F~e~rarfyaAev~l~L~fLH~~---~IIYRDlKLdNiLLD~eGh~kiADFGl 514 (694)
T KOG0694|consen 446 FVMEYVAGGDLMHHIHT--------DVFSEPRARFYAAEVVLGLQFLHEN---GIIYRDLKLDNLLLDTEGHVKIADFGL 514 (694)
T ss_pred EEEEecCCCcEEEEEec--------ccccHHHHHHHHHHHHHHHHHHHhc---CceeeecchhheEEcccCcEEeccccc
Confidence 99999999996555542 2399999999999999999999998 999999999999999999999999999
Q ss_pred hhhc---CCCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCC
Q 004248 687 VCAQ---GGDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNL 747 (766)
Q Consensus 687 a~~~---~~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~ 747 (766)
++.. +..+++.+||+.|+|||++.... |+..+|+|||||+||||+.|..||.
T Consensus 515 cKe~m~~g~~TsTfCGTpey~aPEil~e~~---------Yt~aVDWW~lGVLlyeML~Gq~PF~ 569 (694)
T KOG0694|consen 515 CKEGMGQGDRTSTFCGTPEFLAPEVLTEQS---------YTRAVDWWGLGVLLYEMLVGESPFP 569 (694)
T ss_pred ccccCCCCCccccccCChhhcChhhhccCc---------ccchhhHHHHHHHHHHHHcCCCCCC
Confidence 9864 56678899999999999987766 4788999999999999999999993
No 29
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.8e-37 Score=317.66 Aligned_cols=201 Identities=21% Similarity=0.233 Sum_probs=175.6
Q ss_pred hCCCCccceeecCCcceEEEEE-EcCCcEEEEEEeeccccC--HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEE
Q 004248 533 TGDFSDANLIKNGHSGDLFRGI-LEGGIPVVIKRIDLQSVK--TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVY 609 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~--~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~ 609 (766)
.++|+..++||.|..++||+|+ .+.++.||||+++.++.. .+.+++|+..|+.++|||||+.+..|.. +.++|+||
T Consensus 25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv-~~~LWvVm 103 (516)
T KOG0582|consen 25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVV-DSELWVVM 103 (516)
T ss_pred ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEe-cceeEEee
Confidence 4679999999999999999998 788899999999876655 4688999999999999999999986654 67899999
Q ss_pred eeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhh
Q 004248 610 KYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCA 689 (766)
Q Consensus 610 Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~ 689 (766)
.||.+|++.+++...-. ..+++..+..|.+++++||.|||++ +-||||||+.|||||++|.+||+|||....
T Consensus 104 pfMa~GS~ldIik~~~~-----~Gl~E~~Ia~iLre~LkaL~YLH~~---G~IHRdvKAgnILi~~dG~VkLadFgvsa~ 175 (516)
T KOG0582|consen 104 PFMAGGSLLDIIKTYYP-----DGLEEASIATILREVLKALDYLHQN---GHIHRDVKAGNILIDSDGTVKLADFGVSAS 175 (516)
T ss_pred hhhcCCcHHHHHHHHcc-----ccccHHHHHHHHHHHHHHHHHHHhc---CceecccccccEEEcCCCcEEEcCceeeee
Confidence 99999999999976432 2389999999999999999999998 999999999999999999999999997654
Q ss_pred c---CCC----CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 690 Q---GGD----AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 690 ~---~~~----~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
. +.+ ..+.++|++|||||+......|| +.|+||||||++..||++|+.||...
T Consensus 176 l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GY-------dfKaDIwSfGITA~ELA~G~aPf~k~ 235 (516)
T KOG0582|consen 176 LFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGY-------DFKADIWSFGITACELAHGHAPFSKY 235 (516)
T ss_pred ecccCceeeEeeccccCcccccChHHhhhcccCc-------cchhhhhhhhHHHHHHhcCCCCcccC
Confidence 3 211 14558999999999977777774 89999999999999999999999543
No 30
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.9e-37 Score=331.40 Aligned_cols=199 Identities=20% Similarity=0.231 Sum_probs=176.8
Q ss_pred CCCCccceeecCCcceEEEEE-EcCCcEEEEEEeecccc----CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGI-LEGGIPVVIKRIDLQSV----KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLV 608 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~-~~~g~~vavK~l~~~~~----~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV 608 (766)
+-|+..+.+|+|+.|.|-.|+ ..+|+.+|||.+..... ....+.+|+.+|+-+.||||+++|+++.. ..++|+|
T Consensus 12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~-~~~lylv 90 (786)
T KOG0588|consen 12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWEN-KQHLYLV 90 (786)
T ss_pred cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeecc-CceEEEE
Confidence 346677899999999999998 78999999999976532 24578999999999999999999997655 5789999
Q ss_pred EeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhh
Q 004248 609 YKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVC 688 (766)
Q Consensus 609 ~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~ 688 (766)
.||+++|.|++++.+++. +++.+..+++.||+.|+.|+|+. +|+|||+||+|+|||.++++||+|||+|.
T Consensus 91 lEyv~gGELFdylv~kG~-------l~e~eaa~ff~QIi~gv~yCH~~---~icHRDLKpENlLLd~~~nIKIADFGMAs 160 (786)
T KOG0588|consen 91 LEYVPGGELFDYLVRKGP-------LPEREAAHFFRQILDGVSYCHAF---NICHRDLKPENLLLDVKNNIKIADFGMAS 160 (786)
T ss_pred EEecCCchhHHHHHhhCC-------CCCHHHHHHHHHHHHHHHHHhhh---cceeccCCchhhhhhcccCEeeeccceee
Confidence 999999999999987765 89999999999999999999997 99999999999999999999999999998
Q ss_pred hc--CCCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCCcc
Q 004248 689 AQ--GGDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSSRF 751 (766)
Q Consensus 689 ~~--~~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~~~ 751 (766)
.. +.-..++||++.|.+||++.+..|. +.++||||.|||||.|+||+.||++.+.
T Consensus 161 Le~~gklLeTSCGSPHYA~PEIV~G~pYd--------G~~sDVWSCGVILfALLtG~LPFdDdNi 217 (786)
T KOG0588|consen 161 LEVPGKLLETSCGSPHYAAPEIVSGRPYD--------GRPSDVWSCGVILFALLTGKLPFDDDNI 217 (786)
T ss_pred cccCCccccccCCCcccCCchhhcCCCCC--------CCccccchhHHHHHHHHhCCCCCCCccH
Confidence 76 3335778999999999999988773 5799999999999999999999975543
No 31
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.7e-37 Score=314.67 Aligned_cols=197 Identities=15% Similarity=0.210 Sum_probs=175.8
Q ss_pred CCCccceeecCCcceEEEEE-EcCCcEEEEEEeeccccCH----HHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEE
Q 004248 535 DFSDANLIKNGHSGDLFRGI-LEGGIPVVIKRIDLQSVKT----EAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVY 609 (766)
Q Consensus 535 ~~~~~~~ig~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~----~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~ 609 (766)
+|+..+.+|+|.||+|-+|. ...|+.||||.++++..+. -.+++|++||+.++|||||.+|.+|.. .+.+.+||
T Consensus 54 RyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFEN-kdKIvivM 132 (668)
T KOG0611|consen 54 RYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFEN-KDKIVIVM 132 (668)
T ss_pred HHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcC-CceEEEEE
Confidence 47777899999999999998 5789999999998876652 258899999999999999999996654 67899999
Q ss_pred eeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhh
Q 004248 610 KYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCA 689 (766)
Q Consensus 610 Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~ 689 (766)
||..+|+|++++.+++. +++.+...+++||..|+.|+|.+ +++|||||.+|||+|.++++||+|||++..
T Consensus 133 EYaS~GeLYDYiSer~~-------LsErEaRhfFRQIvSAVhYCHkn---rVvHRDLKLENILLD~N~NiKIADFGLSNl 202 (668)
T KOG0611|consen 133 EYASGGELYDYISERGS-------LSEREARHFFRQIVSAVHYCHKN---RVVHRDLKLENILLDQNNNIKIADFGLSNL 202 (668)
T ss_pred EecCCccHHHHHHHhcc-------ccHHHHHHHHHHHHHHHHHHhhc---cceecccchhheeecCCCCeeeeccchhhh
Confidence 99999999999987654 99999999999999999999998 999999999999999999999999999987
Q ss_pred cCC--CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCCc
Q 004248 690 QGG--DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSSR 750 (766)
Q Consensus 690 ~~~--~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~~ 750 (766)
+.. -..+.||++.|.+||++.+..| -++.+|-||+||+||.++.|-.||+..+
T Consensus 203 y~~~kfLqTFCGSPLYASPEIvNG~PY--------~GPEVDsWsLGvLLYtLVyGtMPFDG~D 257 (668)
T KOG0611|consen 203 YADKKFLQTFCGSPLYASPEIVNGTPY--------KGPEVDSWSLGVLLYTLVYGTMPFDGRD 257 (668)
T ss_pred hccccHHHHhcCCcccCCccccCCCCC--------CCCccchhhHHHHHHHHhhcccccCCch
Confidence 743 3578899999999999887766 3588999999999999999999996543
No 32
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-37 Score=321.59 Aligned_cols=203 Identities=19% Similarity=0.230 Sum_probs=166.4
Q ss_pred HHhCCCCccceeecCCcceEEEEE-EcCCcEEEEEEeecccc---------------CHHHHHHHHHHHhhcCCCCcccc
Q 004248 531 AATGDFSDANLIKNGHSGDLFRGI-LEGGIPVVIKRIDLQSV---------------KTEAYLLELDFFSKVSHARLVPL 594 (766)
Q Consensus 531 ~~~~~~~~~~~ig~G~~g~Vy~~~-~~~g~~vavK~l~~~~~---------------~~~~~~~E~~~l~~l~H~niv~l 594 (766)
+..+.|+..+.||+|.||+|-+|+ ..+++.||||.+.+... ..++..+||.+|++++|||||+|
T Consensus 94 k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~L 173 (576)
T KOG0585|consen 94 KQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKL 173 (576)
T ss_pred eehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEE
Confidence 345779999999999999999999 56799999999965321 12578999999999999999999
Q ss_pred eeEEEec-CCcEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeee
Q 004248 595 LGHCMER-ENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILL 673 (766)
Q Consensus 595 ~~~~~~~-~~~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl 673 (766)
+.+-.+. .+.+|||+|||..|.+...=. ....+++.+.++|..++..||+|||.+ +||||||||+|+||
T Consensus 174 iEvLDDP~s~~~YlVley~s~G~v~w~p~-------d~~els~~~Ar~ylrDvv~GLEYLH~Q---giiHRDIKPsNLLl 243 (576)
T KOG0585|consen 174 IEVLDDPESDKLYLVLEYCSKGEVKWCPP-------DKPELSEQQARKYLRDVVLGLEYLHYQ---GIIHRDIKPSNLLL 243 (576)
T ss_pred EEeecCcccCceEEEEEeccCCccccCCC-------CcccccHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEE
Confidence 9955332 247999999999988753221 112389999999999999999999998 99999999999999
Q ss_pred CCCCcEEeccchhhhhcC--------CCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCC
Q 004248 674 DDKFEVRLGSLSEVCAQG--------GDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHL 745 (766)
Q Consensus 674 ~~~~~~kl~DFG~a~~~~--------~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p 745 (766)
+++|++||+|||.+.... +.....+||++++|||.+..+...+. .+.+.||||+||+||.|+.|+.|
T Consensus 244 ~~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~-----~g~a~DiWalGVTLYCllfG~~P 318 (576)
T KOG0585|consen 244 SSDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSY-----SGFALDIWALGVTLYCLLFGQLP 318 (576)
T ss_pred cCCCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccc-----cchhhhhhhhhhhHHHhhhccCC
Confidence 999999999999986541 11234689999999998876442221 47899999999999999999999
Q ss_pred CCC
Q 004248 746 NLS 748 (766)
Q Consensus 746 ~~~ 748 (766)
|.+
T Consensus 319 F~~ 321 (576)
T KOG0585|consen 319 FFD 321 (576)
T ss_pred ccc
Confidence 953
No 33
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=1.9e-36 Score=332.51 Aligned_cols=197 Identities=17% Similarity=0.223 Sum_probs=168.6
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeecccc----CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV----KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLV 608 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~----~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV 608 (766)
++|+..+.||+|+||+||+|.. .+++.||||+++.... ..+.+.+|++++.+++||||+++++.+.+ ++..|+|
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~-~~~~~lv 79 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQD-KLNLYLI 79 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEec-CCeEEEE
Confidence 4788999999999999999984 5689999999975432 13568889999999999999999987665 5689999
Q ss_pred EeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhh
Q 004248 609 YKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVC 688 (766)
Q Consensus 609 ~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~ 688 (766)
||||++|+|.+++.+++ .+++.+...++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 80 ~E~~~gg~L~~~l~~~~-------~l~~~~~~~~~~qi~~aL~~lH~~---givHrDlKp~NILi~~~~~vkL~DFGla~ 149 (363)
T cd05628 80 MEFLPGGDMMTLLMKKD-------TLTEEETQFYIAETVLAIDSIHQL---GFIHRDIKPDNLLLDSKGHVKLSDFGLCT 149 (363)
T ss_pred EcCCCCCcHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCCEEEeeccCcc
Confidence 99999999999997653 389999999999999999999997 99999999999999999999999999987
Q ss_pred hcCCC--------------------------------------CccceeeecccCCCCCCCCceeeeeeeeeccccccee
Q 004248 689 AQGGD--------------------------------------AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIY 730 (766)
Q Consensus 689 ~~~~~--------------------------------------~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~ 730 (766)
..... ....+||+.|+|||.+.... ++.++|||
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~---------~~~~~Dvw 220 (363)
T cd05628 150 GLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTG---------YNKLCDWW 220 (363)
T ss_pred cccccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCC---------CCCchhhh
Confidence 54211 12346899999999876543 47899999
Q ss_pred cchHHHHHHhcCCCCCCCCc
Q 004248 731 FHGNPLFSAIFNNHLNLSSR 750 (766)
Q Consensus 731 s~Gvvl~elltG~~p~~~~~ 750 (766)
||||++|||++|+.||....
T Consensus 221 SlGvil~ell~G~~Pf~~~~ 240 (363)
T cd05628 221 SLGVIMYEMLIGYPPFCSET 240 (363)
T ss_pred hhHHHHHHHHhCCCCCCCCC
Confidence 99999999999999996443
No 34
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=2.8e-36 Score=326.64 Aligned_cols=196 Identities=16% Similarity=0.181 Sum_probs=171.8
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeecccc----CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV----KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLV 608 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~----~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV 608 (766)
++|+..+.||+|+||.||+|+. .+++.||||.+..... ..+.+.+|++++++++|||||++++++.. ++..|+|
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~~lv 96 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQD-ENRVYFL 96 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEc-CCEEEEE
Confidence 5688899999999999999995 5689999999975432 24578999999999999999999997765 5789999
Q ss_pred EeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhh
Q 004248 609 YKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVC 688 (766)
Q Consensus 609 ~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~ 688 (766)
|||+++|+|.+++.+.. .+++.....++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++
T Consensus 97 ~e~~~~~~L~~~l~~~~-------~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kl~Dfg~~~ 166 (329)
T PTZ00263 97 LEFVVGGELFTHLRKAG-------RFPNDVAKFYHAELVLAFEYLHSK---DIIYRDLKPENLLLDNKGHVKVTDFGFAK 166 (329)
T ss_pred EcCCCCChHHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEECCCCCEEEeeccCce
Confidence 99999999999997643 378999999999999999999998 99999999999999999999999999998
Q ss_pred hcCCCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 689 AQGGDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 689 ~~~~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
..........+|+.|+|||.+.... ++.++|||||||++|||+||+.||...
T Consensus 167 ~~~~~~~~~~gt~~y~aPE~~~~~~---------~~~~~DiwslG~il~elltg~~pf~~~ 218 (329)
T PTZ00263 167 KVPDRTFTLCGTPEYLAPEVIQSKG---------HGKAVDWWTMGVLLYEFIAGYPPFFDD 218 (329)
T ss_pred EcCCCcceecCChhhcCHHHHcCCC---------CCCcceeechHHHHHHHHcCCCCCCCC
Confidence 7755555567899999999876544 468999999999999999999999643
No 35
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=2e-36 Score=322.14 Aligned_cols=196 Identities=17% Similarity=0.180 Sum_probs=170.8
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeecccc----CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV----KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLV 608 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~----~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV 608 (766)
++|+..+.||+|+||.||+|.. .+|+.||+|++..... ..+.+.+|++++++++||||+++++++.+ ++..|+|
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~~lv 79 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHD-QRFLYML 79 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhcc-CCeEEEE
Confidence 4688899999999999999995 4789999999975432 24568899999999999999999987665 5689999
Q ss_pred EeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhh
Q 004248 609 YKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVC 688 (766)
Q Consensus 609 ~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~ 688 (766)
|||+++|+|.+++...+ .+++.....++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++
T Consensus 80 ~e~~~~~~L~~~~~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~NIli~~~~~~kl~Dfg~~~ 149 (291)
T cd05612 80 MEYVPGGELFSYLRNSG-------RFSNSTGLFYASEIVCALEYLHSK---EIVYRDLKPENILLDKEGHIKLTDFGFAK 149 (291)
T ss_pred EeCCCCCCHHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEEecCcch
Confidence 99999999999997653 389999999999999999999997 99999999999999999999999999998
Q ss_pred hcCCCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 689 AQGGDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 689 ~~~~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
..........||+.|+|||.+.... ++.++|||||||++|||+||+.||...
T Consensus 150 ~~~~~~~~~~gt~~y~aPE~~~~~~---------~~~~~DiwSlG~il~~l~~g~~pf~~~ 201 (291)
T cd05612 150 KLRDRTWTLCGTPEYLAPEVIQSKG---------HNKAVDWWALGILIYEMLVGYPPFFDD 201 (291)
T ss_pred hccCCcccccCChhhcCHHHHcCCC---------CCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 7755555567899999999875443 468999999999999999999999644
No 36
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-37 Score=338.68 Aligned_cols=209 Identities=20% Similarity=0.313 Sum_probs=175.7
Q ss_pred ccccHHHHHHHhCCC---------CccceeecCCcceEEEEEEcC----CcEEEEEEeecccc--CHHHHHHHHHHHhhc
Q 004248 522 ESFTYQQLLAATGDF---------SDANLIKNGHSGDLFRGILEG----GIPVVIKRIDLQSV--KTEAYLLELDFFSKV 586 (766)
Q Consensus 522 ~~~~~~~l~~~~~~~---------~~~~~ig~G~~g~Vy~~~~~~----g~~vavK~l~~~~~--~~~~~~~E~~~l~~l 586 (766)
..+||||.-+|...| .+.++||.|.||+||+|.++- ...||||.++.... ++.+|+.|+.||++.
T Consensus 608 DP~TYEDPnqAvreFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQF 687 (996)
T KOG0196|consen 608 DPHTYEDPNQAVREFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQF 687 (996)
T ss_pred CCccccCccHHHHHhhhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccC
Confidence 457888777666655 346889999999999999532 46899999987654 367899999999999
Q ss_pred CCCCcccceeEEEecCCcEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCC
Q 004248 587 SHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDV 666 (766)
Q Consensus 587 ~H~niv~l~~~~~~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDl 666 (766)
.|||||+|.|+... ...+++|.|||++|+|+.+|+++.+ .++|.+...+.++||.||.||.+. +.|||||
T Consensus 688 dHPNIIrLEGVVTk-s~PvMIiTEyMENGsLDsFLR~~DG------qftviQLVgMLrGIAsGMkYLsdm---~YVHRDL 757 (996)
T KOG0196|consen 688 DHPNIIRLEGVVTK-SKPVMIITEYMENGSLDSFLRQNDG------QFTVIQLVGMLRGIASGMKYLSDM---NYVHRDL 757 (996)
T ss_pred CCCcEEEEEEEEec-CceeEEEhhhhhCCcHHHHHhhcCC------ceEeehHHHHHHHHHHHhHHHhhc---Cchhhhh
Confidence 99999999997765 5689999999999999999998765 389999999999999999999987 9999999
Q ss_pred CCCCeeeCCCCcEEeccchhhhhcCCCC-ccc--ee---eecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHh
Q 004248 667 QASSILLDDKFEVRLGSLSEVCAQGGDA-HQS--RI---TRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAI 740 (766)
Q Consensus 667 Kp~NILl~~~~~~kl~DFG~a~~~~~~~-~~~--~~---t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ell 740 (766)
.++|||++.+...||+|||++|...++. ..+ .| -..|.|||.+.... +|.++|||||||||||.+
T Consensus 758 AARNILVNsnLvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RK---------FTsASDVWSyGIVmWEVm 828 (996)
T KOG0196|consen 758 AARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRK---------FTSASDVWSYGIVMWEVM 828 (996)
T ss_pred hhhheeeccceEEEeccccceeecccCCCccccccCCccceeecChhHhhhcc---------cCchhhccccceEEEEec
Confidence 9999999999999999999999874432 111 11 23688999987655 689999999999999966
Q ss_pred c-CCCCCCCC
Q 004248 741 F-NNHLNLSS 749 (766)
Q Consensus 741 t-G~~p~~~~ 749 (766)
+ |.+|+.+.
T Consensus 829 SyGERPYWdm 838 (996)
T KOG0196|consen 829 SYGERPYWDM 838 (996)
T ss_pred ccCCCccccc
Confidence 5 99999543
No 37
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=4e-36 Score=326.56 Aligned_cols=197 Identities=16% Similarity=0.155 Sum_probs=170.7
Q ss_pred CCCCccceeecCCcceEEEEEEc-C-CcEEEEEEeecccc----CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGILE-G-GIPVVIKRIDLQSV----KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFL 607 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~~-~-g~~vavK~l~~~~~----~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~l 607 (766)
++|+..+.||+|+||.||+|... + +..||+|++..... ..+.+.+|+++++.++|||||++++++.+ ++..|+
T Consensus 30 ~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~-~~~~~l 108 (340)
T PTZ00426 30 EDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKD-ESYLYL 108 (340)
T ss_pred hhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEe-CCEEEE
Confidence 46888999999999999999843 3 46899999965432 24578899999999999999999998765 568999
Q ss_pred EEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhh
Q 004248 608 VYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEV 687 (766)
Q Consensus 608 V~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a 687 (766)
||||+++|+|.+++.+.. .+++..+..++.|++.||+|||+. +|+||||||+|||++.++++||+|||++
T Consensus 109 v~Ey~~~g~L~~~i~~~~-------~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~ikL~DFG~a 178 (340)
T PTZ00426 109 VLEFVIGGEFFTFLRRNK-------RFPNDVGCFYAAQIVLIFEYLQSL---NIVYRDLKPENLLLDKDGFIKMTDFGFA 178 (340)
T ss_pred EEeCCCCCcHHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEecCCCC
Confidence 999999999999997654 389999999999999999999997 9999999999999999999999999999
Q ss_pred hhcCCCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCCc
Q 004248 688 CAQGGDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSSR 750 (766)
Q Consensus 688 ~~~~~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~~ 750 (766)
+..........||+.|+|||.+.... ++.++|||||||++|||+||+.||...+
T Consensus 179 ~~~~~~~~~~~gt~~y~aPE~~~~~~---------~~~~~DiwSlGvil~ell~G~~Pf~~~~ 232 (340)
T PTZ00426 179 KVVDTRTYTLCGTPEYIAPEILLNVG---------HGKAADWWTLGIFIYEILVGCPPFYANE 232 (340)
T ss_pred eecCCCcceecCChhhcCHHHHhCCC---------CCccccccchhhHHHHHhcCCCCCCCCC
Confidence 87755555667899999999876543 4679999999999999999999996543
No 38
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-36 Score=325.93 Aligned_cols=202 Identities=19% Similarity=0.336 Sum_probs=170.2
Q ss_pred HHHHHHhCCCCccceeecCCcceEEEEEEcCCcEEEEEEeecccc---CHHHHHHHHHHHhhcCCCCcccceeEEEecCC
Q 004248 527 QQLLAATGDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSV---KTEAYLLELDFFSKVSHARLVPLLGHCMEREN 603 (766)
Q Consensus 527 ~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~---~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~ 603 (766)
+++....+.+...+.||+|+||+||||++.+ .||||.++.... +.+.|++|+.++++-+|.||+=+.|||...
T Consensus 385 ~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG--dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p-- 460 (678)
T KOG0193|consen 385 EEWEIPPEEVLLGERIGSGSFGTVYRGRWHG--DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNP-- 460 (678)
T ss_pred cccccCHHHhhccceeccccccceeeccccc--ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCC--
Confidence 3444444455667899999999999999875 599999976543 357899999999999999999999999763
Q ss_pred cEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEecc
Q 004248 604 EKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGS 683 (766)
Q Consensus 604 ~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~D 683 (766)
...+|..+|+|-+|+.+||..+ ..++..+...||.|||+||.|||.+ +|||||||+.||++++++.+||+|
T Consensus 461 ~~AIiTqwCeGsSLY~hlHv~e------tkfdm~~~idIAqQiaqGM~YLHAK---~IIHrDLKSnNIFl~~~~kVkIgD 531 (678)
T KOG0193|consen 461 PLAIITQWCEGSSLYTHLHVQE------TKFDMNTTIDIAQQIAQGMDYLHAK---NIIHRDLKSNNIFLHEDLKVKIGD 531 (678)
T ss_pred ceeeeehhccCchhhhhccchh------hhhhHHHHHHHHHHHHHhhhhhhhh---hhhhhhccccceEEccCCcEEEec
Confidence 4599999999999999998654 3589999999999999999999998 999999999999999999999999
Q ss_pred chhhhhcC-----CCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCC
Q 004248 684 LSEVCAQG-----GDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNL 747 (766)
Q Consensus 684 FG~a~~~~-----~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~ 747 (766)
||++.... .......+...|||||++..... .+ +++.+||||||||+|||+||..||.
T Consensus 532 FGLatvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~--nP----fS~qSDVYaFGiV~YELltg~lPys 594 (678)
T KOG0193|consen 532 FGLATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDD--NP----FSFQSDVYAFGIVWYELLTGELPYS 594 (678)
T ss_pred ccceeeeeeeccccccCCCccchhhhcHHHHhhccc--CC----CCcccchhhhhHHHHHHHhCcCCcC
Confidence 99986531 11233456778999998864432 22 7999999999999999999999995
No 39
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=5.8e-36 Score=330.88 Aligned_cols=197 Identities=17% Similarity=0.205 Sum_probs=167.5
Q ss_pred CCCccceeecCCcceEEEEE-EcCCcEEEEEEeecccc----CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEE
Q 004248 535 DFSDANLIKNGHSGDLFRGI-LEGGIPVVIKRIDLQSV----KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVY 609 (766)
Q Consensus 535 ~~~~~~~ig~G~~g~Vy~~~-~~~g~~vavK~l~~~~~----~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~ 609 (766)
.|+..+.||+|+||+||+|+ ..+++.||||++..... ..+.+.+|++++++++|||||++++++.+ ++..|+||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~-~~~~~lv~ 80 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQD-KDNLYFVM 80 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEec-CCEEEEEE
Confidence 57889999999999999998 46789999999976432 24568999999999999999999997765 56899999
Q ss_pred eeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhh
Q 004248 610 KYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCA 689 (766)
Q Consensus 610 Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~ 689 (766)
||+++|+|.+++.+.. .+++.....++.|++.||+|||+. +|+||||||+|||++.++++||+|||+++.
T Consensus 81 E~~~gg~L~~~l~~~~-------~~~e~~~~~~~~qi~~aL~~LH~~---givHrDlKp~Nili~~~~~~kL~DFGl~~~ 150 (381)
T cd05626 81 DYIPGGDMMSLLIRME-------VFPEVLARFYIAELTLAIESVHKM---GFIHRDIKPDNILIDLDGHIKLTDFGLCTG 150 (381)
T ss_pred ecCCCCcHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCcHHHEEECCCCCEEEeeCcCCcc
Confidence 9999999999997643 388999999999999999999997 999999999999999999999999999753
Q ss_pred cCC--------------------------------------------------CCccceeeecccCCCCCCCCceeeeee
Q 004248 690 QGG--------------------------------------------------DAHQSRITRLLRLPQSSEQGSSGMVIY 719 (766)
Q Consensus 690 ~~~--------------------------------------------------~~~~~~~t~~y~aPe~~~~~~~g~~~~ 719 (766)
... .....+||..|+|||.+....
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~------ 224 (381)
T cd05626 151 FRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKG------ 224 (381)
T ss_pred cccccccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCC------
Confidence 210 012346899999999876543
Q ss_pred eeecccccceecchHHHHHHhcCCCCCCCCcc
Q 004248 720 LFIIFTIFHIYFHGNPLFSAIFNNHLNLSSRF 751 (766)
Q Consensus 720 ~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~~~ 751 (766)
++.++|||||||++|||+||+.||...+.
T Consensus 225 ---~~~~~DiwSlG~il~elltG~~Pf~~~~~ 253 (381)
T cd05626 225 ---YTQLCDWWSVGVILFEMLVGQPPFLAPTP 253 (381)
T ss_pred ---CCCccceeehhhHHHHHHhCCCCCcCCCH
Confidence 46799999999999999999999965443
No 40
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=1.1e-35 Score=315.51 Aligned_cols=196 Identities=20% Similarity=0.195 Sum_probs=167.8
Q ss_pred CCccceeecCCcceEEEEE-EcCCcEEEEEEeeccccC----HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEe
Q 004248 536 FSDANLIKNGHSGDLFRGI-LEGGIPVVIKRIDLQSVK----TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYK 610 (766)
Q Consensus 536 ~~~~~~ig~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~----~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~E 610 (766)
|+..+.||+|+||.||+|. ..+|+.||||.+...... ...+.+|++++++++|+||+++++++.+ ++..++|||
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~-~~~~~lv~e 80 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYET-KDALCLVLT 80 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEcc-CCeEEEEEE
Confidence 6778999999999999998 467999999998754322 3468899999999999999999987765 568999999
Q ss_pred eCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhc
Q 004248 611 YMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQ 690 (766)
Q Consensus 611 y~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~ 690 (766)
||++|+|.+++..... ..+++.++..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++..
T Consensus 81 ~~~~g~L~~~~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~ 152 (285)
T cd05631 81 IMNGGDLKFHIYNMGN-----PGFDEQRAIFYAAELCCGLEDLQRE---RIVYRDLKPENILLDDRGHIRISDLGLAVQI 152 (285)
T ss_pred ecCCCcHHHHHHhhCC-----CCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeCCCcEEc
Confidence 9999999988864332 2489999999999999999999997 9999999999999999999999999999765
Q ss_pred CC--CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 691 GG--DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 691 ~~--~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
.. ......+|..|+|||.+.... ++.++|||||||++|||++|+.||...
T Consensus 153 ~~~~~~~~~~g~~~y~aPE~~~~~~---------~~~~~DvwslGvil~el~~g~~pf~~~ 204 (285)
T cd05631 153 PEGETVRGRVGTVGYMAPEVINNEK---------YTFSPDWWGLGCLIYEMIQGQSPFRKR 204 (285)
T ss_pred CCCCeecCCCCCCCccCHhhhcCCC---------CCcccCchhHHHHHHHHHhCCCCCCCC
Confidence 32 223456899999999986544 478999999999999999999999643
No 41
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=9.6e-36 Score=323.17 Aligned_cols=196 Identities=19% Similarity=0.196 Sum_probs=171.5
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeecccc----CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV----KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLV 608 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~----~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV 608 (766)
++|+..+.||+|+||.||+|+. .+++.||||+++.... ..+.+.+|++++.+++||||+++++++.. ++..|+|
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~-~~~~~lv 79 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQD-DEYLYLA 79 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEc-CCEEEEE
Confidence 4688999999999999999995 4689999999975432 24568899999999999999999987765 5689999
Q ss_pred EeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhh
Q 004248 609 YKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVC 688 (766)
Q Consensus 609 ~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~ 688 (766)
|||+++|+|.+++.... .+++.++..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++
T Consensus 80 ~e~~~g~~L~~~l~~~~-------~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~ 149 (333)
T cd05600 80 MEYVPGGDFRTLLNNLG-------VLSEDHARFYMAEMFEAVDALHEL---GYIHRDLKPENFLIDASGHIKLTDFGLSK 149 (333)
T ss_pred EeCCCCCCHHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEEEeCcCCc
Confidence 99999999999997543 388999999999999999999997 99999999999999999999999999998
Q ss_pred hcCCCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 689 AQGGDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 689 ~~~~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
..........+|..|+|||.+.... ++.++|||||||++|||++|+.||...
T Consensus 150 ~~~~~~~~~~gt~~y~aPE~~~~~~---------~~~~~DvwslG~il~ell~g~~pf~~~ 201 (333)
T cd05600 150 GIVTYANSVVGSPDYMAPEVLRGKG---------YDFTVDYWSLGCMLYEFLCGFPPFSGS 201 (333)
T ss_pred ccccccCCcccCccccChhHhcCCC---------CCCccceecchHHHhhhhhCCCCCCCC
Confidence 7655555567899999999876543 578999999999999999999999644
No 42
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=7.9e-36 Score=327.91 Aligned_cols=196 Identities=18% Similarity=0.230 Sum_probs=167.9
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeecccc----CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV----KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLV 608 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~----~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV 608 (766)
++|+..+.||+|+||.||+|+. .+|+.||||++..... ..+.+.+|+++++.++||||+++++++.+ ++..|+|
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~-~~~~~lv 79 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQD-ENYLYLI 79 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEc-CCeEEEE
Confidence 4788999999999999999995 5789999999975432 23568899999999999999999997765 5689999
Q ss_pred EeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhh
Q 004248 609 YKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVC 688 (766)
Q Consensus 609 ~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~ 688 (766)
|||+++|+|.+++...+ .+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 80 ~E~~~~g~L~~~l~~~~-------~l~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~ 149 (364)
T cd05599 80 MEYLPGGDMMTLLMKKD-------TFTEEETRFYIAETILAIDSIHKL---GYIHRDIKPDNLLLDAKGHIKLSDFGLCT 149 (364)
T ss_pred ECCCCCcHHHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEeecccce
Confidence 99999999999997643 389999999999999999999998 99999999999999999999999999986
Q ss_pred hcCCC-----------------------------------------CccceeeecccCCCCCCCCceeeeeeeeeccccc
Q 004248 689 AQGGD-----------------------------------------AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIF 727 (766)
Q Consensus 689 ~~~~~-----------------------------------------~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~ 727 (766)
..... ....+||+.|+|||...... ++.++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---------~~~~~ 220 (364)
T cd05599 150 GLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTG---------YNKEC 220 (364)
T ss_pred eccccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCC---------CCCee
Confidence 53211 01235899999999875443 47899
Q ss_pred ceecchHHHHHHhcCCCCCCCC
Q 004248 728 HIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 728 Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
|||||||++|||++|+.||...
T Consensus 221 DiwSlG~il~el~~G~~Pf~~~ 242 (364)
T cd05599 221 DWWSLGVIMYEMLVGYPPFCSD 242 (364)
T ss_pred eeecchhHHHHhhcCCCCCCCC
Confidence 9999999999999999999644
No 43
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=1.3e-35 Score=320.57 Aligned_cols=190 Identities=16% Similarity=0.153 Sum_probs=163.6
Q ss_pred ceeecCCcceEEEEEE-cCCcEEEEEEeecccc----CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEeeCCC
Q 004248 540 NLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV----KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPN 614 (766)
Q Consensus 540 ~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~----~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey~~~ 614 (766)
++||+|+||.||+|+. .+|+.||||+++.... ...++.+|++++++++||||+++++++.. ++..|+||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~-~~~~~lv~e~~~~ 79 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQT-HDRLCFVMEYANG 79 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEc-CCEEEEEEeCCCC
Confidence 4699999999999984 6789999999975432 13468899999999999999999987665 5689999999999
Q ss_pred CChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhc---C
Q 004248 615 GDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQ---G 691 (766)
Q Consensus 615 GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~---~ 691 (766)
|+|.+++.+.+ .+++.+...++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.. .
T Consensus 80 ~~L~~~l~~~~-------~~~~~~~~~~~~qi~~~L~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~ 149 (323)
T cd05571 80 GELFFHLSRER-------VFSEDRARFYGAEIVSALGYLHSC---DVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDG 149 (323)
T ss_pred CcHHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCC
Confidence 99999997543 389999999999999999999998 9999999999999999999999999998754 2
Q ss_pred CCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 692 GDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 692 ~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
.......||+.|+|||.+.... ++.++||||+||++|||+||+.||...
T Consensus 150 ~~~~~~~gt~~y~aPE~~~~~~---------~~~~~DiwSlG~il~elltg~~Pf~~~ 198 (323)
T cd05571 150 ATMKTFCGTPEYLAPEVLEDND---------YGRAVDWWGLGVVMYEMMCGRLPFYNQ 198 (323)
T ss_pred CcccceecCccccChhhhcCCC---------CCccccCcccchhhhhhhcCCCCCCCC
Confidence 2233457899999999886544 467999999999999999999999654
No 44
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=9.5e-36 Score=328.83 Aligned_cols=196 Identities=17% Similarity=0.182 Sum_probs=166.5
Q ss_pred CCCCccceeecCCcceEEEEE-EcCCcEEEEEEeecccc----CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGI-LEGGIPVVIKRIDLQSV----KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLV 608 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~-~~~g~~vavK~l~~~~~----~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV 608 (766)
++|+..+.||+|+||.||+|. ..+++.||||++..... ..+.+.+|++++++++|||||++++++.+ .+..|+|
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~-~~~~~lv 79 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQD-AQYLYLI 79 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEc-CCeeEEE
Confidence 468889999999999999998 46789999999865432 13568899999999999999999997765 5689999
Q ss_pred EeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhh
Q 004248 609 YKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVC 688 (766)
Q Consensus 609 ~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~ 688 (766)
|||+++|+|.+++...+ .+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 80 ~E~~~gg~L~~~l~~~~-------~~~~~~~~~~~~ql~~aL~~LH~~---givHrDlkp~NIll~~~~~~kl~DfGla~ 149 (377)
T cd05629 80 MEFLPGGDLMTMLIKYD-------TFSEDVTRFYMAECVLAIEAVHKL---GFIHRDIKPDNILIDRGGHIKLSDFGLST 149 (377)
T ss_pred EeCCCCCcHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEEeeccccc
Confidence 99999999999997543 388999999999999999999997 99999999999999999999999999986
Q ss_pred hcCCC--------------------------------------------------CccceeeecccCCCCCCCCceeeee
Q 004248 689 AQGGD--------------------------------------------------AHQSRITRLLRLPQSSEQGSSGMVI 718 (766)
Q Consensus 689 ~~~~~--------------------------------------------------~~~~~~t~~y~aPe~~~~~~~g~~~ 718 (766)
..... ....+||+.|+|||.+....
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----- 224 (377)
T cd05629 150 GFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQG----- 224 (377)
T ss_pred ccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCC-----
Confidence 32100 00235899999999876544
Q ss_pred eeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 719 YLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 719 ~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
++.++|||||||++|||+||+.||...
T Consensus 225 ----~~~~~DiwSlGvil~elltG~~Pf~~~ 251 (377)
T cd05629 225 ----YGQECDWWSLGAIMFECLIGWPPFCSE 251 (377)
T ss_pred ----CCCceeeEecchhhhhhhcCCCCCCCC
Confidence 468999999999999999999999643
No 45
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=1.2e-35 Score=328.58 Aligned_cols=196 Identities=17% Similarity=0.189 Sum_probs=166.4
Q ss_pred CCCccceeecCCcceEEEEEE-cCCcEEEEEEeecccc----CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEE
Q 004248 535 DFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV----KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVY 609 (766)
Q Consensus 535 ~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~----~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~ 609 (766)
+|+..++||+|+||.||+|+. .+++.||||++..... ..+.+.+|++++++++|||||++++.+.+ ++..|+||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~-~~~~~lv~ 80 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQD-KDNLYFVM 80 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEe-CCEEEEEE
Confidence 588899999999999999984 6789999999975432 24578899999999999999999997765 56899999
Q ss_pred eeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhh
Q 004248 610 KYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCA 689 (766)
Q Consensus 610 Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~ 689 (766)
|||++|+|.+++.+.+ .+++.....++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 81 E~~~gg~L~~~l~~~~-------~~~e~~~~~~~~qi~~al~~lH~~---~ivHrDlKp~NILl~~~g~~kL~DFGla~~ 150 (382)
T cd05625 81 DYIPGGDMMSLLIRMG-------IFPEDLARFYIAELTCAVESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTG 150 (382)
T ss_pred eCCCCCcHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEeECCCCcc
Confidence 9999999999997543 378888999999999999999997 999999999999999999999999999753
Q ss_pred cCC--------------------------------------------------CCccceeeecccCCCCCCCCceeeeee
Q 004248 690 QGG--------------------------------------------------DAHQSRITRLLRLPQSSEQGSSGMVIY 719 (766)
Q Consensus 690 ~~~--------------------------------------------------~~~~~~~t~~y~aPe~~~~~~~g~~~~ 719 (766)
... .....+||+.|+|||.+....
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~------ 224 (382)
T cd05625 151 FRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTG------ 224 (382)
T ss_pred ccccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCC------
Confidence 210 011236899999999886543
Q ss_pred eeecccccceecchHHHHHHhcCCCCCCCCc
Q 004248 720 LFIIFTIFHIYFHGNPLFSAIFNNHLNLSSR 750 (766)
Q Consensus 720 ~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~~ 750 (766)
++.++||||+||++|||+||+.||...+
T Consensus 225 ---~~~~~DiwSlGvil~elltG~~Pf~~~~ 252 (382)
T cd05625 225 ---YTQLCDWWSVGVILYEMLVGQPPFLAQT 252 (382)
T ss_pred ---CCCeeeEEechHHHHHHHhCCCCCCCCC
Confidence 4679999999999999999999996543
No 46
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=4.4e-36 Score=327.29 Aligned_cols=210 Identities=18% Similarity=0.205 Sum_probs=183.6
Q ss_pred CCCccceeecCCcceEEEEE-EcCCcEEEEEEeeccccCHHHHHHHHHHHhhcC-C-----CCcccceeEEEecCCcEEE
Q 004248 535 DFSDANLIKNGHSGDLFRGI-LEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVS-H-----ARLVPLLGHCMERENEKFL 607 (766)
Q Consensus 535 ~~~~~~~ig~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~-H-----~niv~l~~~~~~~~~~~~l 607 (766)
+|...++||+|+||.|.||. ..+++.||||.++....-..+-..|+.+|..++ | -|+|++++|+.. .++.+|
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~f-r~Hlci 265 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYF-RNHLCI 265 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccChHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecccc-ccceee
Confidence 68889999999999999999 577999999999866555566778999999997 4 489999998776 578999
Q ss_pred EEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCC--CcEEeccch
Q 004248 608 VYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDK--FEVRLGSLS 685 (766)
Q Consensus 608 V~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~--~~~kl~DFG 685 (766)
|+|.++. +|+++|..++. ..++......++.||+.||.+||+. +|||+|||||||||.+. -.+||+|||
T Consensus 266 VfELL~~-NLYellK~n~f-----~Glsl~~ir~~~~Qil~~L~~L~~l---~IIHcDLKPENILL~~~~r~~vKVIDFG 336 (586)
T KOG0667|consen 266 VFELLST-NLYELLKNNKF-----RGLSLPLVRKFAQQILTALLFLHEL---GIIHCDLKPENILLKDPKRSRIKVIDFG 336 (586)
T ss_pred eehhhhh-hHHHHHHhcCC-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCChhheeeccCCcCceeEEecc
Confidence 9999975 99999987654 4589999999999999999999987 99999999999999754 369999999
Q ss_pred hhhhcCCCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCCccccccceeeEEEEe
Q 004248 686 EVCAQGGDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSSRFGVKQQTTIIKLCV 764 (766)
Q Consensus 686 ~a~~~~~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~ 764 (766)
.+........+++.+++|+|||++.+..| +++.||||||||++||.||. |.++++.+.+|+..|.+++.
T Consensus 337 SSc~~~q~vytYiQSRfYRAPEVILGlpY---------~~~IDmWSLGCIlAEL~tG~-PLfpG~ne~DQl~~I~e~lG 405 (586)
T KOG0667|consen 337 SSCFESQRVYTYIQSRFYRAPEVILGLPY---------DTAIDMWSLGCILAELFTGE-PLFPGDNEYDQLARIIEVLG 405 (586)
T ss_pred cccccCCcceeeeeccccccchhhccCCC---------CCccceeehhhhHHhHhcCc-cccCCCCHHHHHHHHHHHhC
Confidence 99988777778899999999999988774 67999999999999999995 77788888888887776653
No 47
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=1.7e-35 Score=321.87 Aligned_cols=205 Identities=18% Similarity=0.226 Sum_probs=166.9
Q ss_pred hCCCCccceeecCCcceEEEEEE------cCCcEEEEEEeeccccC--HHHHHHHHHHHhhc-CCCCcccceeEEEecCC
Q 004248 533 TGDFSDANLIKNGHSGDLFRGIL------EGGIPVVIKRIDLQSVK--TEAYLLELDFFSKV-SHARLVPLLGHCMEREN 603 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~~------~~g~~vavK~l~~~~~~--~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~ 603 (766)
.++|+..++||+|+||.||+|.. .+++.||||++...... .+.+.+|++++.++ +|||||+++++|....+
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 85 (338)
T cd05102 6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNG 85 (338)
T ss_pred hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCC
Confidence 35688899999999999999973 23578999999754322 45789999999999 89999999998876555
Q ss_pred cEEEEEeeCCCCChhhhhhccCCCC-------------------------------------------------------
Q 004248 604 EKFLVYKYMPNGDLSSSLYRKTNTE------------------------------------------------------- 628 (766)
Q Consensus 604 ~~~lV~Ey~~~GsL~~~l~~~~~~~------------------------------------------------------- 628 (766)
..++||||+++|+|.+++.......
T Consensus 86 ~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (338)
T cd05102 86 PLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDD 165 (338)
T ss_pred ceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhccc
Confidence 7899999999999999997532100
Q ss_pred CcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcCCC-----Cccceeeecc
Q 004248 629 DDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGD-----AHQSRITRLL 703 (766)
Q Consensus 629 ~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~~~-----~~~~~~t~~y 703 (766)
.....+++.++..++.||++||+|||+. +|+||||||+|||++.++.+||+|||+++..... .....++..|
T Consensus 166 ~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y 242 (338)
T cd05102 166 LWKSPLTMEDLICYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKW 242 (338)
T ss_pred cccCCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccc
Confidence 0013588999999999999999999997 9999999999999999999999999999865221 1122345679
Q ss_pred cCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCCC
Q 004248 704 RLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLSS 749 (766)
Q Consensus 704 ~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~~ 749 (766)
+|||.+.... ++.++|||||||++|||+| |+.||...
T Consensus 243 ~aPE~~~~~~---------~~~~sDiwslG~il~el~~~g~~pf~~~ 280 (338)
T cd05102 243 MAPESIFDKV---------YTTQSDVWSFGVLLWEIFSLGASPYPGV 280 (338)
T ss_pred cCcHHhhcCC---------CCcccCHHHHHHHHHHHHhCCCCCCCCC
Confidence 9999876543 4789999999999999997 99998543
No 48
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=1.3e-35 Score=326.12 Aligned_cols=201 Identities=16% Similarity=0.187 Sum_probs=169.6
Q ss_pred HHhCCCCccceeecCCcceEEEEEE-cCCcEEEEEEeecccc----CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcE
Q 004248 531 AATGDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV----KTEAYLLELDFFSKVSHARLVPLLGHCMERENEK 605 (766)
Q Consensus 531 ~~~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~----~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 605 (766)
...++|+..+.||+|+||.||+|+. .+++.||+|.+..... ..+.+.+|+++++.++||||+++++++.. ++..
T Consensus 40 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~-~~~~ 118 (370)
T cd05621 40 MKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQD-DKYL 118 (370)
T ss_pred CCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEc-CCEE
Confidence 3456799999999999999999995 5688999999965322 23468899999999999999999997654 6789
Q ss_pred EEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccch
Q 004248 606 FLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLS 685 (766)
Q Consensus 606 ~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG 685 (766)
|+|||||++|+|.+++... .+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||
T Consensus 119 ~lv~Ey~~gg~L~~~l~~~--------~~~~~~~~~~~~qil~aL~~LH~~---~IvHrDLKp~NILl~~~~~~kL~DFG 187 (370)
T cd05621 119 YMVMEYMPGGDLVNLMSNY--------DVPEKWAKFYTAEVVLALDAIHSM---GLIHRDVKPDNMLLDKHGHLKLADFG 187 (370)
T ss_pred EEEEcCCCCCcHHHHHHhc--------CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEEecc
Confidence 9999999999999998643 278889999999999999999997 99999999999999999999999999
Q ss_pred hhhhcCCC----CccceeeecccCCCCCCCCce-eeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 686 EVCAQGGD----AHQSRITRLLRLPQSSEQGSS-GMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 686 ~a~~~~~~----~~~~~~t~~y~aPe~~~~~~~-g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
+++..... .....||..|+|||.+..... ++ ++.++||||+||++|||+||+.||...
T Consensus 188 ~a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~------~~~~~DiwSlG~ilyell~G~~Pf~~~ 250 (370)
T cd05621 188 TCMKMDETGMVRCDTAVGTPDYISPEVLKSQGGDGY------YGRECDWWSVGVFLFEMLVGDTPFYAD 250 (370)
T ss_pred cceecccCCceecccCCCCcccCCHHHHhccCCCCC------CCcccCEEeehHHHHHHHhCCCCCCCC
Confidence 99865322 234568999999998754321 11 478999999999999999999999644
No 49
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=1.4e-35 Score=327.47 Aligned_cols=198 Identities=17% Similarity=0.192 Sum_probs=167.5
Q ss_pred CCCCccceeecCCcceEEEEE-EcCCcEEEEEEeecccc----CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGI-LEGGIPVVIKRIDLQSV----KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLV 608 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~-~~~g~~vavK~l~~~~~----~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV 608 (766)
.+|+..+.||+|+||.||+|+ ..+++.||||.+..... ..+.+.+|++++++++||||+++++.+.+ ++..|+|
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~-~~~~~lv 79 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQD-KDNLYFV 79 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEc-CCEEEEE
Confidence 368899999999999999998 45689999999965322 24568899999999999999999997765 5789999
Q ss_pred EeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhh
Q 004248 609 YKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVC 688 (766)
Q Consensus 609 ~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~ 688 (766)
|||+++|+|.+++.+.+ .+++.....++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+|.
T Consensus 80 ~E~~~~g~L~~~i~~~~-------~~~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~~~~~ikL~DFG~a~ 149 (376)
T cd05598 80 MDYIPGGDMMSLLIRLG-------IFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCT 149 (376)
T ss_pred EeCCCCCcHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHEEECCCCCEEEEeCCCCc
Confidence 99999999999997643 378888899999999999999997 99999999999999999999999999974
Q ss_pred hcCC----------------------------------------------CCccceeeecccCCCCCCCCceeeeeeeee
Q 004248 689 AQGG----------------------------------------------DAHQSRITRLLRLPQSSEQGSSGMVIYLFI 722 (766)
Q Consensus 689 ~~~~----------------------------------------------~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~ 722 (766)
.... ......||+.|+|||.+....
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--------- 220 (376)
T cd05598 150 GFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTG--------- 220 (376)
T ss_pred cccccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCC---------
Confidence 2210 011246899999999876544
Q ss_pred cccccceecchHHHHHHhcCCCCCCCCcc
Q 004248 723 IFTIFHIYFHGNPLFSAIFNNHLNLSSRF 751 (766)
Q Consensus 723 ~~~~~Dv~s~Gvvl~elltG~~p~~~~~~ 751 (766)
++.++|||||||++|||+||+.||...+.
T Consensus 221 ~~~~~DiwSlGvilyell~G~~Pf~~~~~ 249 (376)
T cd05598 221 YTQLCDWWSVGVILYEMLVGQPPFLADTP 249 (376)
T ss_pred CCcceeeeeccceeeehhhCCCCCCCCCH
Confidence 46799999999999999999999965443
No 50
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-35 Score=305.68 Aligned_cols=198 Identities=22% Similarity=0.330 Sum_probs=161.9
Q ss_pred CCCccceeecCCcceEEEEEEcCCcEEEEEEeeccccCHHHHHHHHHHHhh--cCCCCcccceeEEEec---CCcEEEEE
Q 004248 535 DFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSK--VSHARLVPLLGHCMER---ENEKFLVY 609 (766)
Q Consensus 535 ~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~E~~~l~~--l~H~niv~l~~~~~~~---~~~~~lV~ 609 (766)
.....++||+|+||.||||++.+ +.||||++.... .+.|..|-+|.+. ++|+||++++++-... ..+++||+
T Consensus 211 pl~l~eli~~Grfg~V~KaqL~~-~~VAVKifp~~~--kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt 287 (534)
T KOG3653|consen 211 PLQLLELIGRGRFGCVWKAQLDN-RLVAVKIFPEQE--KQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVT 287 (534)
T ss_pred chhhHHHhhcCccceeehhhccC-ceeEEEecCHHH--HHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEe
Confidence 34456789999999999999875 799999996543 4578888888775 5899999999854321 23789999
Q ss_pred eeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccC------CCCCeEecCCCCCCeeeCCCCcEEecc
Q 004248 610 KYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHE------CTLPFVHRDVQASSILLDDKFEVRLGS 683 (766)
Q Consensus 610 Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~------~~~~iiHrDlKp~NILl~~~~~~kl~D 683 (766)
||.+.|+|.++|..+ .++|....+|+..+++||+|||+. ..|+|+|||||++|||+.+|+++.|+|
T Consensus 288 ~fh~kGsL~dyL~~n--------tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaD 359 (534)
T KOG3653|consen 288 EFHPKGSLCDYLKAN--------TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIAD 359 (534)
T ss_pred eeccCCcHHHHHHhc--------cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeec
Confidence 999999999999764 389999999999999999999974 357999999999999999999999999
Q ss_pred chhhhhcC-----CCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCC
Q 004248 684 LSEVCAQG-----GDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLN 746 (766)
Q Consensus 684 FG~a~~~~-----~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~ 746 (766)
||+|..+. ++....+||+.|||||++++...=. + -..-.++||||+|.||+||++.-.-+
T Consensus 360 FGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~--d-~~Afkr~DvYamgLVLWEi~SRC~~~ 424 (534)
T KOG3653|consen 360 FGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQ--D-RDAFKRIDVYAMGLVLWEIASRCTDA 424 (534)
T ss_pred cceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccc--c-HHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 99997652 3456689999999999987643200 0 01346899999999999999865444
No 51
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=5.7e-35 Score=315.61 Aligned_cols=190 Identities=15% Similarity=0.135 Sum_probs=162.7
Q ss_pred ceeecCCcceEEEEEE-cCCcEEEEEEeecccc----CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEeeCCC
Q 004248 540 NLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV----KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPN 614 (766)
Q Consensus 540 ~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~----~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey~~~ 614 (766)
++||+|+||.||+++. .+|+.||+|.++.... ....+.+|++++++++||||+++++++.. ++..|+||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~-~~~~~lv~E~~~~ 79 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQT-HDRLCFVMEYANG 79 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEec-CCEEEEEEeCCCC
Confidence 4699999999999984 5789999999975432 23467889999999999999999987765 5689999999999
Q ss_pred CChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcCC--
Q 004248 615 GDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGG-- 692 (766)
Q Consensus 615 GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~~-- 692 (766)
|+|.+++.+.. .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 80 ~~L~~~l~~~~-------~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~ 149 (323)
T cd05595 80 GELFFHLSRER-------VFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG 149 (323)
T ss_pred CcHHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEEcCCCCEEecccHHhccccCCC
Confidence 99999886543 389999999999999999999997 999999999999999999999999999875321
Q ss_pred -CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 693 -DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 693 -~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
......+|..|+|||...... ++.++|||||||++|||+||+.||...
T Consensus 150 ~~~~~~~gt~~y~aPE~~~~~~---------~~~~~DiwSlGvil~ell~g~~Pf~~~ 198 (323)
T cd05595 150 ATMKTFCGTPEYLAPEVLEDND---------YGRAVDWWGLGVVMYEMMCGRLPFYNQ 198 (323)
T ss_pred CccccccCCcCcCCcccccCCC---------CCchhchhhhHHHHHHHHhCCCCCCCC
Confidence 223356889999999886544 468999999999999999999999644
No 52
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=4.3e-35 Score=315.06 Aligned_cols=188 Identities=17% Similarity=0.140 Sum_probs=161.7
Q ss_pred eecCCcceEEEEEE-cCCcEEEEEEeecccc----CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEeeCCCCC
Q 004248 542 IKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV----KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGD 616 (766)
Q Consensus 542 ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~----~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey~~~Gs 616 (766)
||+|+||.||+|.. .+++.||+|++..... ..+.+.+|++++++++|||||++++++.. ++..|+||||+++|+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e~~~~g~ 79 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQS-PEKLYLVLAFINGGE 79 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEec-CCeEEEEEcCCCCCc
Confidence 69999999999995 5688999999975321 24568899999999999999999987765 568999999999999
Q ss_pred hhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcC---CC
Q 004248 617 LSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQG---GD 693 (766)
Q Consensus 617 L~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~---~~ 693 (766)
|.+++.+.. .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++... ..
T Consensus 80 L~~~l~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~---~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~ 149 (312)
T cd05585 80 LFHHLQREG-------RFDLSRARFYTAELLCALENLHKF---NVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDK 149 (312)
T ss_pred HHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHeEECCCCcEEEEECcccccCccCCCc
Confidence 999997543 389999999999999999999997 99999999999999999999999999997642 12
Q ss_pred CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 694 AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 694 ~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
.....||+.|+|||.+.... ++.++||||+||++|||+||+.||...
T Consensus 150 ~~~~~gt~~y~aPE~~~~~~---------~~~~~DvwslGvil~el~tg~~pf~~~ 196 (312)
T cd05585 150 TNTFCGTPEYLAPELLLGHG---------YTKAVDWWTLGVLLYEMLTGLPPFYDE 196 (312)
T ss_pred cccccCCcccCCHHHHcCCC---------CCCccceechhHHHHHHHhCCCCcCCC
Confidence 23456899999999876543 478999999999999999999999543
No 53
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=6.9e-35 Score=315.62 Aligned_cols=190 Identities=15% Similarity=0.148 Sum_probs=162.8
Q ss_pred ceeecCCcceEEEEEE-cCCcEEEEEEeecccc----CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEeeCCC
Q 004248 540 NLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV----KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPN 614 (766)
Q Consensus 540 ~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~----~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey~~~ 614 (766)
++||+|+||.||+|.. .+|+.||||++..... ...++.+|++++++++||||+++++++.. ++..|+||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~~lv~Ey~~~ 79 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQT-KDRLCFVMEYVNG 79 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEc-CCEEEEEEeCCCC
Confidence 4699999999999984 5789999999975432 24578899999999999999999986654 5689999999999
Q ss_pred CChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcC---
Q 004248 615 GDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQG--- 691 (766)
Q Consensus 615 GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~--- 691 (766)
|+|.+++...+ .+++.++..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++...
T Consensus 80 g~L~~~l~~~~-------~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~ 149 (328)
T cd05593 80 GELFFHLSRER-------VFSEDRTRFYGAEIVSALDYLHSG---KIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDA 149 (328)
T ss_pred CCHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeEECCCCcEEEecCcCCccCCCcc
Confidence 99999886543 389999999999999999999998 99999999999999999999999999987532
Q ss_pred CCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 692 GDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 692 ~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
.......+|..|+|||.+.... ++.++|||||||++|||+||+.||...
T Consensus 150 ~~~~~~~gt~~y~aPE~~~~~~---------~~~~~DiwslGvil~elltG~~Pf~~~ 198 (328)
T cd05593 150 ATMKTFCGTPEYLAPEVLEDND---------YGRAVDWWGLGVVMYEMMCGRLPFYNQ 198 (328)
T ss_pred cccccccCCcCccChhhhcCCC---------CCccCCccccchHHHHHhhCCCCCCCC
Confidence 1223456899999999876543 468999999999999999999999543
No 54
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=2.9e-35 Score=322.93 Aligned_cols=197 Identities=18% Similarity=0.231 Sum_probs=168.1
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeecccc----CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV----KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLV 608 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~----~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV 608 (766)
++|+..+.||+|+||.||+|.. .+++.||||+++.... ..+.+.+|++++.+++||||+++++.+.+ ++..|+|
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~-~~~~~lv 79 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQD-KRNLYLI 79 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEc-CCEEEEE
Confidence 4688899999999999999985 5789999999975322 24568889999999999999999987654 5689999
Q ss_pred EeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhh
Q 004248 609 YKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVC 688 (766)
Q Consensus 609 ~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~ 688 (766)
|||+++|+|.+++.+.+ .+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 80 ~E~~~gg~L~~~l~~~~-------~l~~~~~~~~~~qi~~~L~~lH~~---givHrDLkp~NIli~~~~~vkL~DfG~~~ 149 (360)
T cd05627 80 MEFLPGGDMMTLLMKKD-------TLSEEATQFYIAETVLAIDAIHQL---GFIHRDIKPDNLLLDAKGHVKLSDFGLCT 149 (360)
T ss_pred EeCCCCccHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEeeccCCc
Confidence 99999999999997643 389999999999999999999997 99999999999999999999999999986
Q ss_pred hcCCC--------------------------------------CccceeeecccCCCCCCCCceeeeeeeeeccccccee
Q 004248 689 AQGGD--------------------------------------AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIY 730 (766)
Q Consensus 689 ~~~~~--------------------------------------~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~ 730 (766)
..... ....+||+.|+|||.+.... ++.++|||
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~---------~~~~~Diw 220 (360)
T cd05627 150 GLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTG---------YNKLCDWW 220 (360)
T ss_pred ccccccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCC---------CCCcceec
Confidence 43210 11346899999999876543 46899999
Q ss_pred cchHHHHHHhcCCCCCCCCc
Q 004248 731 FHGNPLFSAIFNNHLNLSSR 750 (766)
Q Consensus 731 s~Gvvl~elltG~~p~~~~~ 750 (766)
||||++|||+||+.||....
T Consensus 221 SlGvilyel~tG~~Pf~~~~ 240 (360)
T cd05627 221 SLGVIMYEMLIGYPPFCSET 240 (360)
T ss_pred cccceeeecccCCCCCCCCC
Confidence 99999999999999996544
No 55
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=9.9e-35 Score=307.71 Aligned_cols=206 Identities=15% Similarity=0.171 Sum_probs=170.1
Q ss_pred cccHHHHHHHhCCCCccceeecCCcceEEEEEEcCCcEEEEEEeeccccC----HHHHHHHHHHHhhcCCCCcccceeEE
Q 004248 523 SFTYQQLLAATGDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVK----TEAYLLELDFFSKVSHARLVPLLGHC 598 (766)
Q Consensus 523 ~~~~~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~----~~~~~~E~~~l~~l~H~niv~l~~~~ 598 (766)
.++.+++ +......||+|++|.||+|+. +|+.||||+++..... .+.|.+|+++|++++|||||+++|++
T Consensus 14 ~i~~~~i-----~~~~~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~ 87 (283)
T PHA02988 14 CIESDDI-----DKYTSVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFI 87 (283)
T ss_pred ecCHHHc-----CCCCCeEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeE
Confidence 3455555 233347899999999999997 6889999999754333 35788999999999999999999987
Q ss_pred Ee--c-CCcEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCC
Q 004248 599 ME--R-ENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDD 675 (766)
Q Consensus 599 ~~--~-~~~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~ 675 (766)
.+ . ....++||||+++|+|.+++++.+ .++|..+..++.|++.||+|||+. .+++||||||+||++++
T Consensus 88 ~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~-------~~~~~~~~~i~~~i~~~l~~lH~~--~~~~Hrdlkp~nill~~ 158 (283)
T PHA02988 88 IDIVDDLPRLSLILEYCTRGYLREVLDKEK-------DLSFKTKLDMAIDCCKGLYNLYKY--TNKPYKNLTSVSFLVTE 158 (283)
T ss_pred EecccCCCceEEEEEeCCCCcHHHHHhhCC-------CCChhHHHHHHHHHHHHHHHHHhc--CCCCCCcCChhhEEECC
Confidence 65 2 236899999999999999997543 389999999999999999999973 26789999999999999
Q ss_pred CCcEEeccchhhhhcCCCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCCc
Q 004248 676 KFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSSR 750 (766)
Q Consensus 676 ~~~~kl~DFG~a~~~~~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~~ 750 (766)
++.+||+|||+++..........++..|+|||........ ++.++|||||||++|||+||+.||...+
T Consensus 159 ~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-------~~~k~Di~SlGvil~el~~g~~Pf~~~~ 226 (283)
T PHA02988 159 NYKLKIICHGLEKILSSPPFKNVNFMVYFSYKMLNDIFSE-------YTIKDDIYSLGVVLWEIFTGKIPFENLT 226 (283)
T ss_pred CCcEEEcccchHhhhccccccccCcccccCHHHhhhcccc-------ccchhhhhHHHHHHHHHHHCCCCCCCCC
Confidence 9999999999998765544555678899999987542111 5889999999999999999999996543
No 56
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=6.3e-36 Score=315.94 Aligned_cols=182 Identities=17% Similarity=0.272 Sum_probs=160.2
Q ss_pred cceeecCCcceEEEEEEcCCcEEEEEEeeccccCHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEeeCCCCChh
Q 004248 539 ANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLS 618 (766)
Q Consensus 539 ~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey~~~GsL~ 618 (766)
.+-+|+|+.|.||+|++.+ +.||||+++.- -..+|+-|++|+|||||.+.|+|.+. ..++||||||+.|-|.
T Consensus 129 LeWlGSGaQGAVF~Grl~n-etVAVKKV~el------kETdIKHLRkLkH~NII~FkGVCtqs-PcyCIiMEfCa~GqL~ 200 (904)
T KOG4721|consen 129 LEWLGSGAQGAVFLGRLHN-ETVAVKKVREL------KETDIKHLRKLKHPNIITFKGVCTQS-PCYCIIMEFCAQGQLY 200 (904)
T ss_pred hhhhccCcccceeeeeccC-ceehhHHHhhh------hhhhHHHHHhccCcceeeEeeeecCC-ceeEEeeeccccccHH
Confidence 5779999999999999874 68999998532 23588999999999999999999874 4789999999999999
Q ss_pred hhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcCCCC--cc
Q 004248 619 SSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDA--HQ 696 (766)
Q Consensus 619 ~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~~~~--~~ 696 (766)
++|+..+ .+.-...+....+||.||.|||.+ +|||||||+-||||..+-.+||+|||.++...+.. -.
T Consensus 201 ~VLka~~-------~itp~llv~Wsk~IA~GM~YLH~h---KIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~STkMS 270 (904)
T KOG4721|consen 201 EVLKAGR-------PITPSLLVDWSKGIAGGMNYLHLH---KIIHRDLKSPNILISYDDVVKISDFGTSKELSDKSTKMS 270 (904)
T ss_pred HHHhccC-------ccCHHHHHHHHHHhhhhhHHHHHh---hHhhhccCCCceEeeccceEEeccccchHhhhhhhhhhh
Confidence 9997654 377777888999999999999998 99999999999999999999999999998875442 24
Q ss_pred ceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCC
Q 004248 697 SRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNL 747 (766)
Q Consensus 697 ~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~ 747 (766)
++||..|||||++.... +++|+||||||||||||+||..||.
T Consensus 271 FaGTVaWMAPEvIrneP---------csEKVDIwSfGVVLWEmLT~EiPYk 312 (904)
T KOG4721|consen 271 FAGTVAWMAPEVIRNEP---------CSEKVDIWSFGVVLWEMLTGEIPYK 312 (904)
T ss_pred hhhhHhhhCHHHhhcCC---------cccccceehhHHHHHHHHhcCCCcc
Confidence 68999999999997765 5899999999999999999999994
No 57
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=2.4e-34 Score=355.33 Aligned_cols=344 Identities=33% Similarity=0.567 Sum_probs=206.1
Q ss_pred CCHHHHHHHHHHHHhCCCC---CCCCCCCCCCCCCccceeec-CCCEEEEEcCCCCcCCCCCCCCccchhhhccCCCCCE
Q 004248 46 SSRTELAALFELRSSLGLR---RRDWPRKVDPCLVWNGVRCQ-NGSVVGINISGFRRTRLGSQNPRFAADALVNLTHLAS 121 (766)
Q Consensus 46 ~~~~~~~aLl~~k~~l~~~---~~~W~~~~~~C~~W~gv~C~-~~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~ 121 (766)
.+++|+.||++||+++.+. ..+|+...| ||.|.||+|+ .++|+.+++++.... |.. +..+..+++|+.
T Consensus 26 ~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~-~c~w~gv~c~~~~~v~~L~L~~~~i~--~~~-----~~~~~~l~~L~~ 97 (968)
T PLN00113 26 LHAEELELLLSFKSSINDPLKYLSNWNSSAD-VCLWQGITCNNSSRVVSIDLSGKNIS--GKI-----SSAIFRLPYIQT 97 (968)
T ss_pred CCHHHHHHHHHHHHhCCCCcccCCCCCCCCC-CCcCcceecCCCCcEEEEEecCCCcc--ccC-----ChHHhCCCCCCE
Confidence 3678999999999999642 468976555 5699999997 579999999975432 222 235667777777
Q ss_pred EecCCCCCCCCCchhhhhCCCCCCEEEccCCCCCccCCcccCCCCCCcEEEeecCcCCCCCCccccCCCCCCEEEccCCC
Q 004248 122 FNASRFLLPGSIPDWLGQQLPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPSSLGQLSVLSVLDLSRNS 201 (766)
Q Consensus 122 L~ls~n~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~ 201 (766)
|++++|.+.|.+|..++..+++|++|+|++|.+++.+|. +.+++|++|+|++|.+++.+|..++++++|++|+|++|.
T Consensus 98 L~Ls~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~--~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~ 175 (968)
T PLN00113 98 INLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNV 175 (968)
T ss_pred EECCCCccCCcCChHHhccCCCCCEEECcCCccccccCc--cccCCCCEEECcCCcccccCChHHhcCCCCCEEECccCc
Confidence 777777777777777664467777777777766665553 345556666666666555555555555566666666555
Q ss_pred CCCCCCcccCCCCCCCEEeccCCcCCCCCCCCCCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCccCCcc
Q 004248 202 LTGNIPTSFGLLKNLSSLDISSNYLTGSIPPGLGTLSKLQYLNVSNNSLASSIPAQLGDLDSLVDLDLSMNSLSGSVPSE 281 (766)
Q Consensus 202 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~ 281 (766)
+++.+|..|+++++|++|+|++|.+++.+|..++++++|++|+|++|++++.+|..++++++|++|++++|++++.+|..
T Consensus 176 l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~ 255 (968)
T PLN00113 176 LVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSS 255 (968)
T ss_pred ccccCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCCcCChhHhcCCCCCEEECcCceeccccChh
Confidence 55555555555555555555555555555555555555555555555555555555555555555555555555555555
Q ss_pred cCCCCCCCEEEccCccCccccCCCccCCCCcccEEEccCCCCCCCCCcc------------------------cCCCCCC
Q 004248 282 LRGLRSLQKFVIGNNFLSGNLSVNLFPTVSQLQIIVLRQNGFTGPPPDV------------------------LWSMPQL 337 (766)
Q Consensus 282 l~~l~~L~~L~ls~N~l~g~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~------------------------l~~l~~L 337 (766)
++++++|++|++++|.+++.+|..+ ..+++|+.|+|++|.+++.+|.. +..+++|
T Consensus 256 l~~l~~L~~L~L~~n~l~~~~p~~l-~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L 334 (968)
T PLN00113 256 LGNLKNLQYLFLYQNKLSGPIPPSI-FSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRL 334 (968)
T ss_pred HhCCCCCCEEECcCCeeeccCchhH-hhccCcCEEECcCCeeccCCChhHcCCCCCcEEECCCCccCCcCChhHhcCCCC
Confidence 5555555555555555555444332 34444555555555554444444 4444555
Q ss_pred CEEEccCCCCCCCCCcccccCCCCCcEEEccCCcCccCCCcC---CCCCCEEeccCCcCccccChhh
Q 004248 338 RLLDISRNNFTGPLPNSRSNVNTSTVELNISQNMFYGGLTPV---LGRFRLVDLSGNYFEGRVPEYV 401 (766)
Q Consensus 338 ~~L~Ls~N~l~g~~p~~~~~~~~~l~~L~ls~N~l~g~~~~~---l~~l~~ldLs~N~l~g~~p~~~ 401 (766)
+.|++++|++++.+|... ....+|+.|++++|.+.|.+|.. +++|+.|++++|++++.+|..+
T Consensus 335 ~~L~L~~n~l~~~~p~~l-~~~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~ 400 (968)
T PLN00113 335 QVLQLWSNKFSGEIPKNL-GKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSL 400 (968)
T ss_pred CEEECcCCCCcCcCChHH-hCCCCCcEEECCCCeeEeeCChhHhCcCCCCEEECcCCEecccCCHHH
Confidence 555555555544444322 23345555555555555555432 3445556666666666665543
No 58
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=3.4e-35 Score=323.18 Aligned_cols=202 Identities=16% Similarity=0.181 Sum_probs=168.8
Q ss_pred HhCCCCccceeecCCcceEEEEEE-cCCcEEEEEEeecccc----CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEE
Q 004248 532 ATGDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV----KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKF 606 (766)
Q Consensus 532 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~----~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~ 606 (766)
..++|+..+.||+|+||.||+|+. .+++.||+|+++.... ..+.+.+|+++++.++||||+++++++.+ ++..|
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~-~~~~~ 119 (370)
T cd05596 41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQD-DKYLY 119 (370)
T ss_pred CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEec-CCEEE
Confidence 346789999999999999999985 5789999999975322 23457899999999999999999986654 66899
Q ss_pred EEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchh
Q 004248 607 LVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSE 686 (766)
Q Consensus 607 lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~ 686 (766)
+||||+++|+|.+++.+. .+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+
T Consensus 120 lv~Ey~~gg~L~~~l~~~--------~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~kL~DfG~ 188 (370)
T cd05596 120 MVMEYMPGGDLVNLMSNY--------DIPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGT 188 (370)
T ss_pred EEEcCCCCCcHHHHHHhc--------CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEcCCCCEEEEeccc
Confidence 999999999999998643 277888889999999999999997 999999999999999999999999999
Q ss_pred hhhcCCC----CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCCc
Q 004248 687 VCAQGGD----AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSSR 750 (766)
Q Consensus 687 a~~~~~~----~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~~ 750 (766)
++..... .....||+.|+|||.+.....+. .++.++|||||||++|||+||+.||....
T Consensus 189 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~-----~~~~~~DiwSlGvilyelltG~~Pf~~~~ 251 (370)
T cd05596 189 CMKMDANGMVRCDTAVGTPDYISPEVLKSQGGDG-----YYGRECDWWSVGVFLYEMLVGDTPFYADS 251 (370)
T ss_pred eeeccCCCcccCCCCCCCcCeECHHHhccCCCCC-----CCCCceeeeehhHHHHHHHhCCCCcCCCC
Confidence 9765322 23456899999999875432111 15789999999999999999999996543
No 59
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-35 Score=321.24 Aligned_cols=196 Identities=22% Similarity=0.342 Sum_probs=163.6
Q ss_pred CCCCccceeecCCcceEEEEEEcC--C---cEEEEEEeeccc----cCHHHHHHHHHHHhhcCCCCcccceeEEEecCCc
Q 004248 534 GDFSDANLIKNGHSGDLFRGILEG--G---IPVVIKRIDLQS----VKTEAYLLELDFFSKVSHARLVPLLGHCMERENE 604 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~~~--g---~~vavK~l~~~~----~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 604 (766)
++....++||+|+||.||+|.+.. + ..||||..+... .+..+|.+|+++|++++|||||+++|++.. +..
T Consensus 157 ~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~-~~P 235 (474)
T KOG0194|consen 157 SDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVL-EEP 235 (474)
T ss_pred cCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcC-CCc
Confidence 344445899999999999999532 3 238999987422 235689999999999999999999999886 568
Q ss_pred EEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccc
Q 004248 605 KFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684 (766)
Q Consensus 605 ~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DF 684 (766)
+|+|||+|+||+|.++|.+.+. .++..++..++.++|+||+|||++ ++|||||.++|+|++.++.+||+||
T Consensus 236 l~ivmEl~~gGsL~~~L~k~~~------~v~~~ek~~~~~~AA~Gl~YLh~k---~~IHRDIAARNcL~~~~~~vKISDF 306 (474)
T KOG0194|consen 236 LMLVMELCNGGSLDDYLKKNKK------SLPTLEKLRFCYDAARGLEYLHSK---NCIHRDIAARNCLYSKKGVVKISDF 306 (474)
T ss_pred cEEEEEecCCCcHHHHHHhCCC------CCCHHHHHHHHHHHHhHHHHHHHC---CCcchhHhHHHheecCCCeEEeCcc
Confidence 9999999999999999987653 499999999999999999999998 9999999999999999999999999
Q ss_pred hhhhhcCCCC--c-cceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCC
Q 004248 685 SEVCAQGGDA--H-QSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLS 748 (766)
Q Consensus 685 G~a~~~~~~~--~-~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~ 748 (766)
|+++...... . ....-..|.|||++..+. +++++|||||||++||+.+ |..||..
T Consensus 307 GLs~~~~~~~~~~~~~klPirWLAPEtl~~~~---------~s~kTDV~sfGV~~~Eif~~g~~Py~g 365 (474)
T KOG0194|consen 307 GLSRAGSQYVMKKFLKKLPIRWLAPETLNTGI---------FSFKTDVWSFGVLLWEIFENGAEPYPG 365 (474)
T ss_pred ccccCCcceeeccccccCcceecChhhhccCc---------cccccchhheeeeEEeeeccCCCCCCC
Confidence 9987643111 1 112234689999987664 6899999999999999999 8889843
No 60
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=5.9e-35 Score=321.27 Aligned_cols=206 Identities=16% Similarity=0.191 Sum_probs=172.3
Q ss_pred HHHHHHhCCCCccceeecCCcceEEEEEE-cCCcEEEEEEeecccc----CHHHHHHHHHHHhhcCCCCcccceeEEEec
Q 004248 527 QQLLAATGDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV----KTEAYLLELDFFSKVSHARLVPLLGHCMER 601 (766)
Q Consensus 527 ~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~----~~~~~~~E~~~l~~l~H~niv~l~~~~~~~ 601 (766)
.++....++|+..+.||+|+||.||+|+. .+++.||+|.+..... ..+.+.+|+++++.++||||+++++.+..
T Consensus 36 ~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~- 114 (371)
T cd05622 36 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD- 114 (371)
T ss_pred hhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc-
Confidence 34455567899999999999999999995 5688999999865322 13457899999999999999999987655
Q ss_pred CCcEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEe
Q 004248 602 ENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRL 681 (766)
Q Consensus 602 ~~~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl 681 (766)
++..|+||||+++|+|.+++... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++++||
T Consensus 115 ~~~~~lv~Ey~~gg~L~~~~~~~--------~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NIll~~~~~ikL 183 (371)
T cd05622 115 DRYLYMVMEYMPGGDLVNLMSNY--------DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKL 183 (371)
T ss_pred CCEEEEEEcCCCCCcHHHHHHhc--------CCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHEEECCCCCEEE
Confidence 56899999999999999998643 278888899999999999999998 9999999999999999999999
Q ss_pred ccchhhhhcCCC----CccceeeecccCCCCCCCCce-eeeeeeeecccccceecchHHHHHHhcCCCCCCCCc
Q 004248 682 GSLSEVCAQGGD----AHQSRITRLLRLPQSSEQGSS-GMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSSR 750 (766)
Q Consensus 682 ~DFG~a~~~~~~----~~~~~~t~~y~aPe~~~~~~~-g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~~ 750 (766)
+|||+++..... .....||+.|+|||.+..... +. ++.++|||||||++|||++|+.||...+
T Consensus 184 ~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~------~~~~~DiwSlGvilyell~G~~Pf~~~~ 251 (371)
T cd05622 184 ADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGY------YGRECDWWSVGVFLYEMLVGDTPFYADS 251 (371)
T ss_pred EeCCceeEcCcCCcccccCcccCccccCHHHHhccCCCcc------CCCccceeehhHHHHHHHhCCCCCCCCC
Confidence 999999765322 234568999999998754321 11 5789999999999999999999996543
No 61
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=8.5e-35 Score=309.04 Aligned_cols=197 Identities=20% Similarity=0.257 Sum_probs=166.2
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeecccc--CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEe
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV--KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYK 610 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~E 610 (766)
++|...++||+|+||.||+|.. .+++.||+|+++.... ....+.+|++++++++||||+++++++.. ++..++|||
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-~~~~~lv~e 83 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHT-ERCLTLVFE 83 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcC-CCeEEEEEe
Confidence 5688899999999999999985 5789999999865432 24578899999999999999999997755 567999999
Q ss_pred eCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhc
Q 004248 611 YMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQ 690 (766)
Q Consensus 611 y~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~ 690 (766)
|++ |+|.+++.... ..+++..+..++.||+.||+|||+. +|+||||||+|||+++++.+||+|||+++..
T Consensus 84 ~~~-~~l~~~l~~~~------~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~ 153 (288)
T cd07871 84 YLD-SDLKQYLDNCG------NLMSMHNVKIFMFQLLRGLSYCHKR---KILHRDLKPQNLLINEKGELKLADFGLARAK 153 (288)
T ss_pred CCC-cCHHHHHHhcC------CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEECcCcceeec
Confidence 998 49999886543 2478999999999999999999997 9999999999999999999999999998764
Q ss_pred CC---CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 691 GG---DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 691 ~~---~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
.. ......++..|+|||.+..... ++.++||||+||++|||+||+.||...
T Consensus 154 ~~~~~~~~~~~~~~~y~aPE~~~~~~~--------~~~~~DiwslG~~l~~l~~g~~pf~~~ 207 (288)
T cd07871 154 SVPTKTYSNEVVTLWYRPPDVLLGSTE--------YSTPIDMWGVGCILYEMATGRPMFPGS 207 (288)
T ss_pred cCCCccccCceecccccChHHhcCCcc--------cCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 22 2234567899999998754321 478999999999999999999999543
No 62
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=5.7e-35 Score=312.73 Aligned_cols=198 Identities=19% Similarity=0.248 Sum_probs=166.8
Q ss_pred hCCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC--HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEE
Q 004248 533 TGDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK--TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVY 609 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~--~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~ 609 (766)
.++|+..+.||+|+||.||+|+. .+++.||||++...... ...+.+|++++++++||||+++++++.. ++..++||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-~~~~~lv~ 82 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHT-KETLTLVF 82 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEec-CCeEEEEE
Confidence 46799999999999999999995 47899999998654322 4467899999999999999999997765 56899999
Q ss_pred eeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhh
Q 004248 610 KYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCA 689 (766)
Q Consensus 610 Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~ 689 (766)
||++ |+|.+++..... .+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++.
T Consensus 83 e~~~-~~l~~~~~~~~~------~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~ 152 (303)
T cd07869 83 EYVH-TDLCQYMDKHPG------GLHPENVKLFLFQLLRGLSYIHQR---YILHRDLKPQNLLISDTGELKLADFGLARA 152 (303)
T ss_pred ECCC-cCHHHHHHhCCC------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECCCCccee
Confidence 9996 688888865432 388999999999999999999998 999999999999999999999999999875
Q ss_pred cCC---CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 690 QGG---DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 690 ~~~---~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
... ......+|+.|+|||.+..... ++.++||||+||++|||+||+.||...
T Consensus 153 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~--------~~~~~DiwslG~il~~l~~g~~pf~~~ 207 (303)
T cd07869 153 KSVPSHTYSNEVVTLWYRPPDVLLGSTE--------YSTCLDMWGVGCIFVEMIQGVAAFPGM 207 (303)
T ss_pred ccCCCccCCCCcccCCCCChHHHcCCCC--------CCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 432 2234567899999998754321 478899999999999999999999643
No 63
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=1.2e-34 Score=314.30 Aligned_cols=202 Identities=18% Similarity=0.187 Sum_probs=168.6
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeecccc----CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV----KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLV 608 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~----~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV 608 (766)
++|+..+.||+|+||.||+++. .+++.||||.+..... ..+.+.+|+.++..++||||+++++++.+ ++..|+|
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~~lv 79 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQD-ENNLYLV 79 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEec-CCeEEEE
Confidence 4788899999999999999994 5689999999975322 24568899999999999999999987665 5789999
Q ss_pred EeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhh
Q 004248 609 YKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVC 688 (766)
Q Consensus 609 ~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~ 688 (766)
|||+++|+|.+++.+.. ..+++.++..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 80 ~e~~~g~~L~~~l~~~~------~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~ 150 (331)
T cd05597 80 MDYYVGGDLLTLLSKFE------DRLPEDMARFYLAEMVLAIDSVHQL---GYVHRDIKPDNVLLDKNGHIRLADFGSCL 150 (331)
T ss_pred EecCCCCcHHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHhC---CeEECCCCHHHEEECCCCCEEEEECCcee
Confidence 99999999999997532 2488999999999999999999998 99999999999999999999999999987
Q ss_pred hcCCC----CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 689 AQGGD----AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 689 ~~~~~----~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
..... .....+|+.|+|||.+.....+... ++.++|||||||++|||++|+.||...
T Consensus 151 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~----~~~~~DiwslG~~l~el~~g~~Pf~~~ 211 (331)
T cd05597 151 RLLADGTVQSNVAVGTPDYISPEILQAMEDGKGR----YGPECDWWSLGVCMYEMLYGETPFYAE 211 (331)
T ss_pred ecCCCCCccccceeccccccCHHHHhhccccccC----CCCcceeehhhhHHHHHhhCCCCCCCC
Confidence 55322 1224689999999987542221111 578999999999999999999999654
No 64
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1.8e-34 Score=312.91 Aligned_cols=196 Identities=20% Similarity=0.223 Sum_probs=169.3
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC--HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEe
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK--TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYK 610 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~--~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~E 610 (766)
++|+..+.||+|+||.||+++. .+|..||+|.+...... .+++.+|++++++++||||+++++++.. ++..++|||
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e 83 (331)
T cd06649 5 DDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS-DGEISICME 83 (331)
T ss_pred ccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEE-CCEEEEEee
Confidence 5789999999999999999995 57889999998754322 4679999999999999999999998766 568999999
Q ss_pred eCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhc
Q 004248 611 YMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQ 690 (766)
Q Consensus 611 y~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~ 690 (766)
|+++|+|.+++.... .+++..+..++.|++.||+|||+. .+|+||||||+||++++++.+||+|||+++..
T Consensus 84 ~~~~~~L~~~l~~~~-------~~~~~~~~~~~~~i~~~l~~lH~~--~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 154 (331)
T cd06649 84 HMDGGSLDQVLKEAK-------RIPEEILGKVSIAVLRGLAYLREK--HQIMHRDVKPSNILVNSRGEIKLCDFGVSGQL 154 (331)
T ss_pred cCCCCcHHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHhhc--CCEEcCCCChhhEEEcCCCcEEEccCcccccc
Confidence 999999999997543 388999999999999999999974 26999999999999999999999999998765
Q ss_pred C-CCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 691 G-GDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 691 ~-~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
. .......++..|+|||...... ++.++|||||||++|||+||+.||..
T Consensus 155 ~~~~~~~~~g~~~y~aPE~~~~~~---------~~~~~DiwslG~il~el~tg~~p~~~ 204 (331)
T cd06649 155 IDSMANSFVGTRSYMSPERLQGTH---------YSVQSDIWSMGLSLVELAIGRYPIPP 204 (331)
T ss_pred cccccccCCCCcCcCCHhHhcCCC---------CCchHhHHHHHHHHHHHHhCCCCCCC
Confidence 3 2234456889999999876443 47899999999999999999999954
No 65
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=9.9e-35 Score=314.08 Aligned_cols=190 Identities=15% Similarity=0.138 Sum_probs=161.9
Q ss_pred ceeecCCcceEEEEE-EcCCcEEEEEEeecccc----CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEeeCCC
Q 004248 540 NLIKNGHSGDLFRGI-LEGGIPVVIKRIDLQSV----KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPN 614 (766)
Q Consensus 540 ~~ig~G~~g~Vy~~~-~~~g~~vavK~l~~~~~----~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey~~~ 614 (766)
+.||+|+||.||+|. ..+|+.||+|.+..... ...++.+|++++++++||||+++++++.. ++..|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~-~~~~~lv~E~~~~ 79 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQT-HDRLCFVMEYANG 79 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEc-CCEEEEEEeCCCC
Confidence 469999999999998 46789999999975432 23567889999999999999999986655 5689999999999
Q ss_pred CChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhcc-CCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcC--
Q 004248 615 GDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHH-ECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQG-- 691 (766)
Q Consensus 615 GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~-- 691 (766)
|+|.+++.+.+ .+++.++..++.|++.||+|||+ . +|+||||||+|||+++++.+||+|||+++...
T Consensus 80 ~~L~~~l~~~~-------~l~~~~~~~~~~qi~~aL~~lH~~~---~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~ 149 (325)
T cd05594 80 GELFFHLSRER-------VFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD 149 (325)
T ss_pred CcHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHhcC---CEEecCCCCCeEEECCCCCEEEecCCCCeecCCC
Confidence 99999886543 38999999999999999999996 5 89999999999999999999999999987532
Q ss_pred -CCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 692 -GDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 692 -~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
.......+|..|+|||.+.... ++.++|||||||++|||+||+.||...
T Consensus 150 ~~~~~~~~gt~~y~aPE~~~~~~---------~~~~~DiwslG~il~el~tG~~Pf~~~ 199 (325)
T cd05594 150 GATMKTFCGTPEYLAPEVLEDND---------YGRAVDWWGLGVVMYEMMCGRLPFYNQ 199 (325)
T ss_pred CcccccccCCcccCCHHHHccCC---------CCCccccccccceeeeeccCCCCCCCC
Confidence 2223456899999999876543 467999999999999999999999544
No 66
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=7.7e-35 Score=318.22 Aligned_cols=197 Identities=20% Similarity=0.232 Sum_probs=170.3
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeecccc----CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV----KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLV 608 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~----~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV 608 (766)
++|+..+.||+|+||.||+|+. .+|+.||||+++.... ..+.+.+|+++++.++||||+++++++.+ ++..|+|
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~~lv 79 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQD-EEHLYLV 79 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheec-CCeEEEE
Confidence 4688899999999999999995 4789999999975432 24578899999999999999999987765 5689999
Q ss_pred EeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhh
Q 004248 609 YKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVC 688 (766)
Q Consensus 609 ~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~ 688 (766)
|||+++|+|.+++.+.. .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 80 ~e~~~~~~L~~~l~~~~-------~l~~~~~~~i~~qi~~aL~~LH~~---giiH~Dlkp~NIll~~~~~~kL~Dfg~~~ 149 (350)
T cd05573 80 MEYMPGGDLMNLLIRKD-------VFPEETARFYIAELVLALDSVHKL---GFIHRDIKPDNILIDADGHIKLADFGLCK 149 (350)
T ss_pred EcCCCCCCHHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEeecCCCCc
Confidence 99999999999997653 389999999999999999999997 99999999999999999999999999997
Q ss_pred hcCCC--------------------------------CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHH
Q 004248 689 AQGGD--------------------------------AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPL 736 (766)
Q Consensus 689 ~~~~~--------------------------------~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl 736 (766)
..... .....||..|+|||...... ++.++|||||||++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---------~~~~~DiwSlG~il 220 (350)
T cd05573 150 KMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTP---------YGLECDWWSLGVIL 220 (350)
T ss_pred cCcccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCC---------CCCceeeEecchhh
Confidence 65322 22346899999999876553 57899999999999
Q ss_pred HHHhcCCCCCCCCc
Q 004248 737 FSAIFNNHLNLSSR 750 (766)
Q Consensus 737 ~elltG~~p~~~~~ 750 (766)
|||+||+.||....
T Consensus 221 ~ell~g~~Pf~~~~ 234 (350)
T cd05573 221 YEMLYGFPPFYSDT 234 (350)
T ss_pred hhhccCCCCCCCCC
Confidence 99999999996544
No 67
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-35 Score=285.02 Aligned_cols=205 Identities=23% Similarity=0.271 Sum_probs=175.6
Q ss_pred CCCCccceeecCCcceEEEEE-EcCCcEEEEEEeeccccC-HHHHHHHHHHHhhcCCCCcccceeEEEec----CCcEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGI-LEGGIPVVIKRIDLQSVK-TEAYLLELDFFSKVSHARLVPLLGHCMER----ENEKFL 607 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~-~~~~~~E~~~l~~l~H~niv~l~~~~~~~----~~~~~l 607 (766)
++|.+.+.+|+|||+.||.++ ..++..+|+|++.....+ .+..++|++.-++++||||+++++++... ..+.|+
T Consensus 21 ~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~yl 100 (302)
T KOG2345|consen 21 KRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAYL 100 (302)
T ss_pred ceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEEE
Confidence 568899999999999999999 788999999999876643 67899999999999999999999987542 235899
Q ss_pred EEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhh
Q 004248 608 VYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEV 687 (766)
Q Consensus 608 V~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a 687 (766)
+++|...|+|.+.+.+... ....+++.+.+.|+.+|++||++||+. .|+.+||||||.|||+.+++.+++.|||.+
T Consensus 101 l~Pyy~~Gsl~d~i~~~k~---kg~~~sE~~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls~~~~~vl~D~GS~ 176 (302)
T KOG2345|consen 101 LLPYYKRGSLLDEIERLKI---KGNFVSEAQILWIFLGICRGLEALHEK-EPPYAHRDIKPANILLSDSGLPVLMDLGSA 176 (302)
T ss_pred EeehhccccHHHHHHHHhh---cCCccCHHHHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEecCCCceEEEeccCc
Confidence 9999999999999976443 234699999999999999999999986 567999999999999999999999999988
Q ss_pred hhcC----C--------CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 688 CAQG----G--------DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 688 ~~~~----~--------~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
.... . +......|..|+|||.+....+.. +++++|||||||++|+|+.|..||+.
T Consensus 177 ~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~t------i~ertDIWSLGCtLYa~mf~~sPfe~ 243 (302)
T KOG2345|consen 177 TQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCT------ITERTDIWSLGCTLYAMMFGESPFER 243 (302)
T ss_pred cccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcc------cccccchhhhhHHHHHHHHcCCcchH
Confidence 6531 1 112345688999999887766555 79999999999999999999999954
No 68
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=2.3e-34 Score=310.91 Aligned_cols=190 Identities=17% Similarity=0.174 Sum_probs=161.7
Q ss_pred ceeecCCcceEEEEEE----cCCcEEEEEEeecccc-----CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEe
Q 004248 540 NLIKNGHSGDLFRGIL----EGGIPVVIKRIDLQSV-----KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYK 610 (766)
Q Consensus 540 ~~ig~G~~g~Vy~~~~----~~g~~vavK~l~~~~~-----~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~E 610 (766)
+.||+|+||.||+++. .+++.||||.++.... ....+.+|++++++++||||+++++++.. ++..|+|||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~-~~~~~lv~e 80 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQT-GGKLYLILE 80 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEec-CCeEEEEEe
Confidence 6899999999999984 3578999999975322 13467889999999999999999997765 568999999
Q ss_pred eCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhc
Q 004248 611 YMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQ 690 (766)
Q Consensus 611 y~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~ 690 (766)
|+++|+|.+++.+.+ .+.+..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 81 ~~~~~~L~~~~~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 150 (323)
T cd05584 81 YLSGGELFMHLEREG-------IFMEDTACFYLSEISLALEHLHQQ---GIIYRDLKPENILLDAQGHVKLTDFGLCKES 150 (323)
T ss_pred CCCCchHHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEeeCcCCeec
Confidence 999999999997543 378888999999999999999997 9999999999999999999999999998743
Q ss_pred C---CCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 691 G---GDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 691 ~---~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
. .......+|..|+|||...... ++.++|||||||++|||+||+.||...
T Consensus 151 ~~~~~~~~~~~gt~~y~aPE~~~~~~---------~~~~~DiwslG~il~ell~G~~pf~~~ 203 (323)
T cd05584 151 IHEGTVTHTFCGTIEYMAPEILMRSG---------HGKAVDWWSLGALMYDMLTGAPPFTAE 203 (323)
T ss_pred ccCCCcccccCCCccccChhhccCCC---------CCCcceecccHHHHHHHhcCCCCCCCC
Confidence 1 2233456899999999876543 467999999999999999999999643
No 69
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=1.2e-34 Score=314.12 Aligned_cols=202 Identities=17% Similarity=0.174 Sum_probs=168.4
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeecccc----CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV----KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLV 608 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~----~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV 608 (766)
++|...+.||+|+||.||+++. .+++.||+|.+..... ..+.+.+|+.++..++|+||+++++++.+ ++..|+|
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~-~~~~~lv 79 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQD-ENYLYLV 79 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEc-CCEEEEE
Confidence 4788899999999999999995 5688999999965322 13458889999999999999999987654 6789999
Q ss_pred EeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhh
Q 004248 609 YKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVC 688 (766)
Q Consensus 609 ~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~ 688 (766)
|||+++|+|.+++.+... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 80 ~Ey~~gg~L~~~l~~~~~------~l~~~~~~~~~~qi~~~L~~lH~~---~iiHrDlkp~Nill~~~~~~kl~DfG~a~ 150 (331)
T cd05624 80 MDYYVGGDLLTLLSKFED------RLPEDMARFYIAEMVLAIHSIHQL---HYVHRDIKPDNVLLDMNGHIRLADFGSCL 150 (331)
T ss_pred EeCCCCCcHHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCchHHEEEcCCCCEEEEecccee
Confidence 999999999999976322 388999999999999999999997 99999999999999999999999999997
Q ss_pred hcCCCC----ccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 689 AQGGDA----HQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 689 ~~~~~~----~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
...... ....||..|+|||.+.....+... ++.++|||||||++|||+||+.||...
T Consensus 151 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~----~~~~~DiwSlGvil~ell~g~~Pf~~~ 211 (331)
T cd05624 151 KMNQDGTVQSSVAVGTPDYISPEILQAMEDGMGK----YGPECDWWSLGVCMYEMLYGETPFYAE 211 (331)
T ss_pred eccCCCceeeccccCCcccCCHHHHhccccCCCC----CCCcccEEeeehhhhhhhhCCCCccCC
Confidence 653321 234689999999987542211111 578999999999999999999999644
No 70
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=1.6e-34 Score=312.22 Aligned_cols=195 Identities=15% Similarity=0.146 Sum_probs=164.5
Q ss_pred CCCccceeecCCcceEEEEEE-cCCcEEEEEEeecccc----CHHHHHHHHHHHhhc-CCCCcccceeEEEecCCcEEEE
Q 004248 535 DFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV----KTEAYLLELDFFSKV-SHARLVPLLGHCMERENEKFLV 608 (766)
Q Consensus 535 ~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~----~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~~lV 608 (766)
+|+..+.||+|+||.||+|+. .+++.||||.+..... ..+.+..|.+++..+ +||+|+++++++.. .+..|+|
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~-~~~~~lv 79 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQT-MDRLYFV 79 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEec-CCEEEEE
Confidence 578889999999999999985 4678999999975432 134577788888887 57888888886654 5689999
Q ss_pred EeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhh
Q 004248 609 YKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVC 688 (766)
Q Consensus 609 ~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~ 688 (766)
|||+++|+|.+++.... .+++.++..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++
T Consensus 80 ~E~~~~g~L~~~~~~~~-------~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kL~DfG~~~ 149 (323)
T cd05616 80 MEYVNGGDLMYQIQQVG-------RFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCK 149 (323)
T ss_pred EcCCCCCCHHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CEEecCCCHHHeEECCCCcEEEccCCCce
Confidence 99999999999987543 389999999999999999999997 99999999999999999999999999987
Q ss_pred hcC---CCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 689 AQG---GDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 689 ~~~---~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
... .......||+.|+|||.+.... ++.++|||||||++|||+||+.||...
T Consensus 150 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~---------~~~~~DiwSlGvil~elltg~~Pf~~~ 204 (323)
T cd05616 150 ENMWDGVTTKTFCGTPDYIAPEIIAYQP---------YGKSVDWWAFGVLLYEMLAGQAPFEGE 204 (323)
T ss_pred ecCCCCCccccCCCChhhcCHHHhcCCC---------CCCccchhchhHHHHHHHhCCCCCCCC
Confidence 542 1233456899999999886544 478999999999999999999999643
No 71
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-35 Score=270.75 Aligned_cols=210 Identities=19% Similarity=0.226 Sum_probs=179.2
Q ss_pred CCCccceeecCCcceEEEEE-EcCCcEEEEEEeeccccC---HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEe
Q 004248 535 DFSDANLIKNGHSGDLFRGI-LEGGIPVVIKRIDLQSVK---TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYK 610 (766)
Q Consensus 535 ~~~~~~~ig~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~---~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~E 610 (766)
+|+..++||+|.||+||||+ +++++.||+|+++.+... ....+||+.+++.++|+|||++++.... ++..-+|+|
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhs-dkkltlvfe 81 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHS-DKKLTLVFE 81 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhcc-CceeEEeHH
Confidence 46778999999999999999 778999999999765432 5678999999999999999999996654 678999999
Q ss_pred eCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhc
Q 004248 611 YMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQ 690 (766)
Q Consensus 611 y~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~ 690 (766)
||.. +|..+...-.+ .++.+....++.|+.+||.|+|++ .+.|||+||.|.||+.+|+.|++|||+|+..
T Consensus 82 ~cdq-dlkkyfdslng------~~d~~~~rsfmlqllrgl~fchsh---nvlhrdlkpqnllin~ngelkladfglaraf 151 (292)
T KOG0662|consen 82 FCDQ-DLKKYFDSLNG------DLDPEIVRSFMLQLLRGLGFCHSH---NVLHRDLKPQNLLINRNGELKLADFGLARAF 151 (292)
T ss_pred HhhH-HHHHHHHhcCC------cCCHHHHHHHHHHHHhhhhhhhhh---hhhhccCCcceEEeccCCcEEecccchhhhc
Confidence 9975 88888764332 488899999999999999999998 8999999999999999999999999999987
Q ss_pred CCC---CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCCccccccceeeEEEE
Q 004248 691 GGD---AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSSRFGVKQQTTIIKLC 763 (766)
Q Consensus 691 ~~~---~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~ 763 (766)
+-+ .+..+.|.||++|.++.+... |++..|+||-|||+.|+...-.|.+++..-++|++.|.+++
T Consensus 152 gipvrcysaevvtlwyrppdvlfgakl--------y~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~l 219 (292)
T KOG0662|consen 152 GIPVRCYSAEVVTLWYRPPDVLFGAKL--------YSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLL 219 (292)
T ss_pred CCceEeeeceeeeeeccCcceeeeeeh--------hccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHh
Confidence 644 345578999999998876544 68899999999999999987778877777777777765543
No 72
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.9e-35 Score=312.79 Aligned_cols=201 Identities=19% Similarity=0.218 Sum_probs=176.4
Q ss_pred CCCCccceeecCCcceEEEEE-EcCCcEEEEEEeeccccC---HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGI-LEGGIPVVIKRIDLQSVK---TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVY 609 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~---~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~ 609 (766)
++|...+.+|+|+||.++..+ ..+++.+|+|++...... ++...+|+.++++++|||||...+.+.+++...+|||
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm 83 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM 83 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence 568889999999999999887 456789999999765543 4578899999999999999999998877443399999
Q ss_pred eeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhh
Q 004248 610 KYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCA 689 (766)
Q Consensus 610 Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~ 689 (766)
|||+||++.+.|.+.++ ..++++++..++.|++.|+.|||++ +|+|||||+.||+++.+..+||+|||+|+.
T Consensus 84 ~Y~eGg~l~~~i~~~k~-----~~f~E~~i~~~~~Q~~~av~ylH~~---~iLHRDlK~~Nifltk~~~VkLgDfGlaK~ 155 (426)
T KOG0589|consen 84 EYCEGGDLAQLIKEQKG-----VLFPEERILKWFVQILLAVNYLHEN---RVLHRDLKCANIFLTKDKKVKLGDFGLAKI 155 (426)
T ss_pred eecCCCCHHHHHHHHhh-----ccccHHHHHHHHHHHHHHHHHHHhh---hhhcccchhhhhhccccCceeecchhhhhh
Confidence 99999999999987653 4589999999999999999999987 999999999999999999999999999998
Q ss_pred cCCC---CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCCcc
Q 004248 690 QGGD---AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSSRF 751 (766)
Q Consensus 690 ~~~~---~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~~~ 751 (766)
...+ ..+.+||+.|+.||.+....| +.|+||||+||++|||++-|++|...+.
T Consensus 156 l~~~~~~a~tvvGTp~YmcPEil~d~pY---------n~KSDiWsLGC~~yEm~~lk~aF~a~~m 211 (426)
T KOG0589|consen 156 LNPEDSLASTVVGTPYYMCPEILSDIPY---------NEKSDIWSLGCCLYEMCTLKPAFKASNM 211 (426)
T ss_pred cCCchhhhheecCCCcccCHHHhCCCCC---------CccCcchhhcchHHHHHhcccccCccch
Confidence 8543 466789999999999987775 5799999999999999999999965443
No 73
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=2.3e-34 Score=311.05 Aligned_cols=195 Identities=15% Similarity=0.164 Sum_probs=163.9
Q ss_pred CCCccceeecCCcceEEEEEE-cCCcEEEEEEeecccc----CHHHHHHHHHHHhhcCCC-CcccceeEEEecCCcEEEE
Q 004248 535 DFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV----KTEAYLLELDFFSKVSHA-RLVPLLGHCMERENEKFLV 608 (766)
Q Consensus 535 ~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~----~~~~~~~E~~~l~~l~H~-niv~l~~~~~~~~~~~~lV 608 (766)
+|+..+.||+|+||.||+|+. .+++.||||++..... ..+.+..|.+++..++|+ +|+++++++.. .+..|+|
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~-~~~~~lv 79 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQT-MDRLYFV 79 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEc-CCEEEEE
Confidence 578889999999999999985 4678999999975432 245788999999999775 47777775544 5689999
Q ss_pred EeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhh
Q 004248 609 YKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVC 688 (766)
Q Consensus 609 ~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~ 688 (766)
|||+++|+|.+++.... .+++.++..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++
T Consensus 80 ~E~~~~g~L~~~~~~~~-------~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~~~ 149 (324)
T cd05587 80 MEYVNGGDLMYHIQQVG-------KFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDAEGHIKIADFGMCK 149 (324)
T ss_pred EcCCCCCcHHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEEcCCCCEEEeecCcce
Confidence 99999999999997543 388999999999999999999997 99999999999999999999999999987
Q ss_pred hc---CCCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 689 AQ---GGDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 689 ~~---~~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
.. ........||..|+|||.+.... ++.++||||+||++|||+||+.||...
T Consensus 150 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~---------~~~~~DiwslGvil~elltG~~pf~~~ 204 (324)
T cd05587 150 ENIFGGKTTRTFCGTPDYIAPEIIAYQP---------YGKSVDWWAFGVLLYEMLAGQPPFDGE 204 (324)
T ss_pred ecCCCCCceeeecCCccccChhhhcCCC---------CCcccchhhhHHHHHHHHhCCCCCCCC
Confidence 53 12233456899999999886544 467999999999999999999999543
No 74
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=1.9e-34 Score=312.73 Aligned_cols=202 Identities=18% Similarity=0.179 Sum_probs=167.6
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeecccc----CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV----KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLV 608 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~----~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV 608 (766)
++|+..++||+|+||.||+++. .+++.||+|.+..... ..+.|.+|+.++..++|+||+++++++.+ ++..|+|
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~~lv 79 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQD-ENNLYLV 79 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEec-CCEEEEE
Confidence 4688899999999999999995 4578999999864322 13458899999999999999999986654 5789999
Q ss_pred EeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhh
Q 004248 609 YKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVC 688 (766)
Q Consensus 609 ~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~ 688 (766)
|||+++|+|.+++++... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 80 ~ey~~~g~L~~~l~~~~~------~l~~~~~~~~~~qi~~al~~lH~~---~iiHrDlkp~Nili~~~~~~kL~DfG~a~ 150 (332)
T cd05623 80 MDYYVGGDLLTLLSKFED------RLPEDMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFGSCL 150 (332)
T ss_pred EeccCCCcHHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEeecchhe
Confidence 999999999999976332 489999999999999999999997 99999999999999999999999999987
Q ss_pred hcCCC----CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 689 AQGGD----AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 689 ~~~~~----~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
..... .....||+.|+|||.+.....+... ++.++|||||||++|||++|+.||...
T Consensus 151 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~----~~~~~DvwSlGvil~ell~g~~Pf~~~ 211 (332)
T cd05623 151 KLMEDGTVQSSVAVGTPDYISPEILQAMEDGKGK----YGPECDWWSLGVCMYEMLYGETPFYAE 211 (332)
T ss_pred ecccCCcceecccccCccccCHHHHhccccCCCC----CCCcCCEEeeHHHHHHHhcCCCCCCCC
Confidence 54221 1234689999999987532211111 578999999999999999999999644
No 75
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-35 Score=307.76 Aligned_cols=194 Identities=22% Similarity=0.289 Sum_probs=169.7
Q ss_pred CCCccceeecCCcceEEEEE-EcCCcEEEEEEeeccccC--HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEee
Q 004248 535 DFSDANLIKNGHSGDLFRGI-LEGGIPVVIKRIDLQSVK--TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKY 611 (766)
Q Consensus 535 ~~~~~~~ig~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~--~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey 611 (766)
.|...+.||+|+||.||||. ..+++.||+|.++..... .++..+|+.++.+++|+||.+.|+.+.. +..++++|||
T Consensus 14 ~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~-g~~LwiiMey 92 (467)
T KOG0201|consen 14 LYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLK-GTKLWIIMEY 92 (467)
T ss_pred ccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheee-cccHHHHHHH
Confidence 46677899999999999999 567999999999876554 5689999999999999999999997776 5679999999
Q ss_pred CCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcC
Q 004248 612 MPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQG 691 (766)
Q Consensus 612 ~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~ 691 (766)
|.||++.+.+.... .+++....-|.+++..|+.|||++ +.||||||+.|||+..+|.+|++|||++....
T Consensus 93 ~~gGsv~~lL~~~~-------~~~E~~i~~ilre~l~~l~ylH~~---~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~ 162 (467)
T KOG0201|consen 93 CGGGSVLDLLKSGN-------ILDEFEIAVILREVLKGLDYLHSE---KKIHRDIKAANILLSESGDVKLADFGVAGQLT 162 (467)
T ss_pred hcCcchhhhhccCC-------CCccceeeeehHHHHHHhhhhhhc---ceecccccccceeEeccCcEEEEecceeeeee
Confidence 99999999997543 247777788999999999999998 99999999999999999999999999987653
Q ss_pred C---CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 692 G---DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 692 ~---~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
. ...+.+||++|||||++.... |+.|+||||+|++.+||++|.+|+..
T Consensus 163 ~~~~rr~tfvGTPfwMAPEVI~~~~---------Y~~KADIWSLGITaiEla~GePP~s~ 213 (467)
T KOG0201|consen 163 NTVKRRKTFVGTPFWMAPEVIKQSG---------YDTKADIWSLGITAIELAKGEPPHSK 213 (467)
T ss_pred chhhccccccccccccchhhhcccc---------ccchhhhhhhhHHHHHHhcCCCCCcc
Confidence 2 236789999999999997443 47899999999999999999999853
No 76
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=2.3e-34 Score=312.15 Aligned_cols=195 Identities=17% Similarity=0.129 Sum_probs=164.7
Q ss_pred CCCccceeecCCcceEEEEEE----cCCcEEEEEEeecccc-----CHHHHHHHHHHHhhc-CCCCcccceeEEEecCCc
Q 004248 535 DFSDANLIKNGHSGDLFRGIL----EGGIPVVIKRIDLQSV-----KTEAYLLELDFFSKV-SHARLVPLLGHCMERENE 604 (766)
Q Consensus 535 ~~~~~~~ig~G~~g~Vy~~~~----~~g~~vavK~l~~~~~-----~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~ 604 (766)
+|+..+.||+|+||.||+++. .+++.||+|.+..... ..+.+.+|+++++++ +||||+++++++.. ++.
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~-~~~ 79 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQT-EAK 79 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEec-CCE
Confidence 478889999999999999974 3688999999965321 145688999999999 59999999986654 568
Q ss_pred EEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccc
Q 004248 605 KFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684 (766)
Q Consensus 605 ~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DF 684 (766)
.++||||+++|+|.+++.++. .+++.+...++.||+.||+|||+. +|+||||||+|||++.++.+||+||
T Consensus 80 ~~lv~e~~~~g~L~~~l~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nili~~~~~~kl~Df 149 (332)
T cd05614 80 LHLILDYVSGGEMFTHLYQRD-------NFSEDEVRFYSGEIILALEHLHKL---GIVYRDIKLENILLDSEGHVVLTDF 149 (332)
T ss_pred EEEEEeCCCCCcHHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHeEECCCCCEEEeeC
Confidence 999999999999999997643 389999999999999999999997 9999999999999999999999999
Q ss_pred hhhhhcCC----CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 685 SEVCAQGG----DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 685 G~a~~~~~----~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
|+++.... ......||..|+|||.+..... ++.++|||||||++|||+||+.||..
T Consensus 150 G~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~--------~~~~~DiwslG~il~elltg~~pf~~ 209 (332)
T cd05614 150 GLSKEFLSEEKERTYSFCGTIEYMAPEIIRGKGG--------HGKAVDWWSLGILIFELLTGASPFTL 209 (332)
T ss_pred cCCccccccCCCccccccCCccccCHHHhcCCCC--------CCCccccccchhhhhhhhcCCCCCCC
Confidence 99976421 1223568999999998754321 46799999999999999999999953
No 77
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=1.3e-34 Score=313.83 Aligned_cols=202 Identities=17% Similarity=0.184 Sum_probs=169.3
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeecccc----CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV----KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLV 608 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~----~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV 608 (766)
++|+..+.||+|+||.||+|+. .+|+.||||+++.... ..+.+.+|+++++.++||||+++++++.+ ++..|+|
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~-~~~~~lv 79 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQD-KDNLYLV 79 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEec-CCeEEEE
Confidence 4688899999999999999984 5789999999976433 24568899999999999999999987655 5689999
Q ss_pred EeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhh
Q 004248 609 YKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVC 688 (766)
Q Consensus 609 ~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~ 688 (766)
|||+++|+|.+++.+... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 80 ~e~~~~~~L~~~l~~~~~------~l~~~~~~~~~~qi~~aL~~lH~~---~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~ 150 (330)
T cd05601 80 MEYQPGGDLLSLLNRYED------QFDEDMAQFYLAELVLAIHSVHQM---GYVHRDIKPENVLIDRTGHIKLADFGSAA 150 (330)
T ss_pred ECCCCCCCHHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEcccCchHheEECCCCCEEeccCCCCe
Confidence 999999999999976532 489999999999999999999997 99999999999999999999999999997
Q ss_pred hcCCC----CccceeeecccCCCCCCCCcee-eeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 689 AQGGD----AHQSRITRLLRLPQSSEQGSSG-MVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 689 ~~~~~----~~~~~~t~~y~aPe~~~~~~~g-~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
..... .....+|..|+|||.+...... .. .++.++|||||||++|||+||+.||...
T Consensus 151 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~----~~~~~~DiwslG~il~el~~g~~Pf~~~ 212 (330)
T cd05601 151 RLTANKMVNSKLPVGTPDYIAPEVLTTMNGDGKG----TYGVECDWWSLGVIAYEMIYGRSPFHEG 212 (330)
T ss_pred ECCCCCceeeecccCCccccCHHHhccccccccC----CCCCcceeecccceeeeeccCCCCCCCC
Confidence 65322 1223578999999986532111 11 1578999999999999999999999644
No 78
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=2.9e-34 Score=310.95 Aligned_cols=188 Identities=18% Similarity=0.166 Sum_probs=161.7
Q ss_pred ceeecCCcceEEEEEE-cCCcEEEEEEeeccccC----HHHHHHHHHHHhhc-CCCCcccceeEEEecCCcEEEEEeeCC
Q 004248 540 NLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK----TEAYLLELDFFSKV-SHARLVPLLGHCMERENEKFLVYKYMP 613 (766)
Q Consensus 540 ~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~----~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~~lV~Ey~~ 613 (766)
++||+|+||.||+|+. .+++.||||.++..... .+.+.+|..++.++ +||||+++++++.. ++..|+|||||+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~-~~~~~lv~e~~~ 79 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQT-ESRLFFVIEFVS 79 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEc-CCEEEEEEeCCC
Confidence 4799999999999985 57899999999764322 34588899999998 79999999997655 568999999999
Q ss_pred CCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhc---
Q 004248 614 NGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQ--- 690 (766)
Q Consensus 614 ~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~--- 690 (766)
+|+|.+++.+.+ .+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++..
T Consensus 80 ~g~L~~~~~~~~-------~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~ 149 (329)
T cd05588 80 GGDLMFHMQRQR-------KLPEEHARFYSAEISLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRP 149 (329)
T ss_pred CCCHHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEECcCccccccccC
Confidence 999999886543 389999999999999999999997 9999999999999999999999999998753
Q ss_pred CCCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCC
Q 004248 691 GGDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNL 747 (766)
Q Consensus 691 ~~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~ 747 (766)
........||..|+|||.+.... ++.++|||||||++|||+||+.||.
T Consensus 150 ~~~~~~~~gt~~y~aPE~~~~~~---------~~~~~DiwslG~~l~el~~g~~Pf~ 197 (329)
T cd05588 150 GDTTSTFCGTPNYIAPEILRGED---------YGFSVDWWALGVLMFEMMAGRSPFD 197 (329)
T ss_pred CCccccccCCccccCHHHHcCCC---------CCCccceechHHHHHHHHHCCCCcc
Confidence 22234457899999999886544 4679999999999999999999995
No 79
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=3.4e-34 Score=310.28 Aligned_cols=188 Identities=18% Similarity=0.157 Sum_probs=160.7
Q ss_pred ceeecCCcceEEEEEE-cCCcEEEEEEeeccccC----HHHHHHHHHHHhhc-CCCCcccceeEEEecCCcEEEEEeeCC
Q 004248 540 NLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK----TEAYLLELDFFSKV-SHARLVPLLGHCMERENEKFLVYKYMP 613 (766)
Q Consensus 540 ~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~----~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~~lV~Ey~~ 613 (766)
++||+|+||.||+|+. .+++.||+|.++..... .+.+.+|+.++.++ +|||||++++++.. ++..|+||||++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~-~~~~~lv~E~~~ 79 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQT-ESRLFFVIEYVN 79 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEe-CCEEEEEEeCCC
Confidence 4799999999999994 56889999999764322 34578899998877 79999999997655 578999999999
Q ss_pred CCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcC--
Q 004248 614 NGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQG-- 691 (766)
Q Consensus 614 ~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~-- 691 (766)
+|+|..++.+.. .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 80 ~~~L~~~~~~~~-------~l~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~ 149 (329)
T cd05618 80 GGDLMFHMQRQR-------KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 149 (329)
T ss_pred CCCHHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCCEEEeeCCccccccCC
Confidence 999998886543 389999999999999999999997 99999999999999999999999999987531
Q ss_pred -CCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCC
Q 004248 692 -GDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNL 747 (766)
Q Consensus 692 -~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~ 747 (766)
.......||..|+|||.+.... ++.++|||||||++|||+||+.||.
T Consensus 150 ~~~~~~~~gt~~y~aPE~~~~~~---------~~~~~DiwslG~il~el~~g~~Pf~ 197 (329)
T cd05618 150 GDTTSTFCGTPNYIAPEILRGED---------YGFSVDWWALGVLMFEMMAGRSPFD 197 (329)
T ss_pred CCccccccCCccccCHHHHcCCC---------CCCccceecccHHHHHHhhCCCCCc
Confidence 2233456899999999886544 4679999999999999999999994
No 80
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-34 Score=335.24 Aligned_cols=199 Identities=24% Similarity=0.379 Sum_probs=166.5
Q ss_pred CCccceeecCCcceEEEEEEcC--C----cEEEEEEeecccc--CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEE
Q 004248 536 FSDANLIKNGHSGDLFRGILEG--G----IPVVIKRIDLQSV--KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFL 607 (766)
Q Consensus 536 ~~~~~~ig~G~~g~Vy~~~~~~--g----~~vavK~l~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~l 607 (766)
.+..+.||+|+||.||+|...+ | ..||||.++.... +..+|.+|..+|++++|||||+++|+|.+ ....++
T Consensus 694 v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~-~~~~~i 772 (1025)
T KOG1095|consen 694 VTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLD-SGPPLI 772 (1025)
T ss_pred eEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecC-CCCcEE
Confidence 4456889999999999999543 3 3599999976543 35689999999999999999999999998 568999
Q ss_pred EEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhh
Q 004248 608 VYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEV 687 (766)
Q Consensus 608 V~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a 687 (766)
++|||++|||..+|++.+........++..+.+.++.|||+|+.||+++ ++|||||.++|+||++...+||+|||+|
T Consensus 773 ~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~---~fvHRDLAaRNCLL~~~r~VKIaDFGlA 849 (1025)
T KOG1095|consen 773 LLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESK---HFVHRDLAARNCLLDERRVVKIADFGLA 849 (1025)
T ss_pred EehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhC---CCcCcchhhhheeecccCcEEEcccchh
Confidence 9999999999999987644333345699999999999999999999998 9999999999999999999999999999
Q ss_pred hhcC-CCCccce----eeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCC
Q 004248 688 CAQG-GDAHQSR----ITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNL 747 (766)
Q Consensus 688 ~~~~-~~~~~~~----~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~ 747 (766)
+.+. .+..... --.-|||||.+..+. +|+|+|||||||++||++| |..||.
T Consensus 850 rDiy~~~yyr~~~~a~lPvkWm~PEsl~d~i---------FtskSDvWsFGVllWEifslG~~PY~ 906 (1025)
T KOG1095|consen 850 RDIYDKDYYRKHGEAMLPVKWMPPESLKDGI---------FTSKSDVWSFGVLLWEIFSLGATPYP 906 (1025)
T ss_pred HhhhhchheeccCccccceecCCHHHHhhcc---------cccccchhhhHHHHHHHHhCCCCCCC
Confidence 9542 2221111 123589999886543 6899999999999999999 888983
No 81
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=3e-34 Score=309.74 Aligned_cols=190 Identities=16% Similarity=0.159 Sum_probs=161.2
Q ss_pred ceeecCCcceEEEEEE-cCCcEEEEEEeecccc----CHHHHHHHHHHHhhc-CCCCcccceeEEEecCCcEEEEEeeCC
Q 004248 540 NLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV----KTEAYLLELDFFSKV-SHARLVPLLGHCMERENEKFLVYKYMP 613 (766)
Q Consensus 540 ~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~----~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~~lV~Ey~~ 613 (766)
++||+|+||.||+|+. .+++.||||.+..... ..+.+..|.+++..+ +||||+++++++.. ++..|+||||++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~-~~~~~lv~E~~~ 79 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQT-KDRLFFVMEYVN 79 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEc-CCeEEEEEeCCC
Confidence 4699999999999985 5688999999975432 235678899999876 79999999997765 568999999999
Q ss_pred CCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcC--
Q 004248 614 NGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQG-- 691 (766)
Q Consensus 614 ~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~-- 691 (766)
+|+|..++.+.+ .+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++...
T Consensus 80 ~~~L~~~l~~~~-------~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~ 149 (321)
T cd05591 80 GGDLMFQIQRSR-------KFDEPRSRFYAAEVTLALMFLHRH---GVIYRDLKLDNILLDAEGHCKLADFGMCKEGILN 149 (321)
T ss_pred CCcHHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeecccceecccC
Confidence 999999987543 389999999999999999999998 99999999999999999999999999987532
Q ss_pred -CCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 692 -GDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 692 -~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
.......+|..|+|||...... ++.++|||||||++|||+||+.||...
T Consensus 150 ~~~~~~~~gt~~y~aPE~~~~~~---------~~~~~DvwslG~il~el~tg~~Pf~~~ 199 (321)
T cd05591 150 GVTTTTFCGTPDYIAPEILQELE---------YGPSVDWWALGVLMYEMMAGQPPFEAD 199 (321)
T ss_pred CccccccccCccccCHHHHcCCC---------CCCccceechhHHHHHHhcCCCCCCCC
Confidence 2233456899999999875443 478999999999999999999999644
No 82
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=4.3e-34 Score=308.80 Aligned_cols=190 Identities=19% Similarity=0.207 Sum_probs=159.2
Q ss_pred ceeecCCcceEEEEEE-cCCcEEEEEEeeccccC----HHHHHHHHH-HHhhcCCCCcccceeEEEecCCcEEEEEeeCC
Q 004248 540 NLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK----TEAYLLELD-FFSKVSHARLVPLLGHCMERENEKFLVYKYMP 613 (766)
Q Consensus 540 ~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~----~~~~~~E~~-~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey~~ 613 (766)
++||+|+||+||+|+. .+|+.||||++...... .+++.+|.. +++.++||||+++++++.. .+..|+||||++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~-~~~~~lv~e~~~ 79 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQT-ADKLYFVLDYVN 79 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEe-CCEEEEEEcCCC
Confidence 4699999999999995 57999999999754321 334556655 5678999999999987765 568999999999
Q ss_pred CCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcC--
Q 004248 614 NGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQG-- 691 (766)
Q Consensus 614 ~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~-- 691 (766)
+|+|.+++.+.. .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 80 ~g~L~~~l~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~---givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~ 149 (323)
T cd05575 80 GGELFFHLQRER-------SFPEPRARFYAAEIASALGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEH 149 (323)
T ss_pred CCCHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeccCCCcccccC
Confidence 999999987543 388999999999999999999997 99999999999999999999999999987531
Q ss_pred -CCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 692 -GDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 692 -~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
.......||..|+|||...... ++.++|||||||++|||+||+.||...
T Consensus 150 ~~~~~~~~gt~~y~aPE~~~~~~---------~~~~~DvwslG~il~ell~g~~pf~~~ 199 (323)
T cd05575 150 SKTTSTFCGTPEYLAPEVLRKQP---------YDRTVDWWCLGAVLYEMLYGLPPFYSR 199 (323)
T ss_pred CCccccccCChhhcChhhhcCCC---------CCccccccccchhhhhhhcCCCCCCCC
Confidence 2233456899999999876543 478999999999999999999999644
No 83
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-35 Score=312.50 Aligned_cols=195 Identities=23% Similarity=0.295 Sum_probs=169.3
Q ss_pred CCccceeecCCcceEEEEE-EcCCcEEEEEEeeccccC----HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEe
Q 004248 536 FSDANLIKNGHSGDLFRGI-LEGGIPVVIKRIDLQSVK----TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYK 610 (766)
Q Consensus 536 ~~~~~~ig~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~----~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~E 610 (766)
|.+.+.||.|+||.||-|+ ..+...||||++.....+ .+++..|++.|++++|||+|...|+|.. +...|||||
T Consensus 28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLr-e~TaWLVME 106 (948)
T KOG0577|consen 28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLR-EHTAWLVME 106 (948)
T ss_pred HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeec-cchHHHHHH
Confidence 6778999999999999999 567889999999764433 5689999999999999999999996654 668999999
Q ss_pred eCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhc
Q 004248 611 YMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQ 690 (766)
Q Consensus 611 y~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~ 690 (766)
||- |+-.|++.-.+ .++.+-.+..|+.|++.||+|||++ +.||||||+.|||+++.|.+|++|||.|...
T Consensus 107 YCl-GSAsDlleVhk------KplqEvEIAAi~~gaL~gLaYLHS~---~~IHRDiKAGNILLse~g~VKLaDFGSAsi~ 176 (948)
T KOG0577|consen 107 YCL-GSASDLLEVHK------KPLQEVEIAAITHGALQGLAYLHSH---NRIHRDIKAGNILLSEPGLVKLADFGSASIM 176 (948)
T ss_pred HHh-ccHHHHHHHHh------ccchHHHHHHHHHHHHHHHHHHHHh---hHHhhhccccceEecCCCeeeeccccchhhc
Confidence 997 57777775433 2488889999999999999999998 8999999999999999999999999998765
Q ss_pred CCCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 691 GGDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 691 ~~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
.+..+++||++|||||++..-..|. |+-|+||||+|++..|++-.|+|.+.
T Consensus 177 -~PAnsFvGTPywMAPEVILAMDEGq------YdgkvDvWSLGITCIELAERkPPlFn 227 (948)
T KOG0577|consen 177 -APANSFVGTPYWMAPEVILAMDEGQ------YDGKVDVWSLGITCIELAERKPPLFN 227 (948)
T ss_pred -CchhcccCCccccchhHheeccccc------cCCccceeeccchhhhhhhcCCCccC
Confidence 4566789999999999887655554 78899999999999999999999853
No 84
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=4.1e-34 Score=309.11 Aligned_cols=193 Identities=19% Similarity=0.228 Sum_probs=161.9
Q ss_pred CCccceeecCCcceEEEEEE-cCCcEEEEEEeecccc----CHHHHHHHHHHH---hhcCCCCcccceeEEEecCCcEEE
Q 004248 536 FSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV----KTEAYLLELDFF---SKVSHARLVPLLGHCMERENEKFL 607 (766)
Q Consensus 536 ~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~----~~~~~~~E~~~l---~~l~H~niv~l~~~~~~~~~~~~l 607 (766)
|+..+.||+|+||.||+|.. .+++.||||+++.... ..+.+.+|++++ ++++||||+++++++.. .+..|+
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~-~~~~~l 79 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQT-EDHVCF 79 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEc-CCEEEE
Confidence 56678999999999999984 5789999999975431 134567776655 56789999999997655 568999
Q ss_pred EEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhh
Q 004248 608 VYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEV 687 (766)
Q Consensus 608 V~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a 687 (766)
||||+++|+|..++++. .+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||++
T Consensus 80 v~E~~~~~~L~~~~~~~--------~l~~~~~~~~~~qi~~al~~lH~~---~ivHrdlkp~Nill~~~~~~kL~Dfg~~ 148 (324)
T cd05589 80 VMEYAAGGDLMMHIHTD--------VFSEPRAVFYAACVVLGLQYLHEN---KIVYRDLKLDNLLLDTEGFVKIADFGLC 148 (324)
T ss_pred EEcCCCCCcHHHHhhcC--------CCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCcEEeCcccCC
Confidence 99999999999888532 389999999999999999999997 9999999999999999999999999998
Q ss_pred hhcC---CCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 688 CAQG---GDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 688 ~~~~---~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
+... .......++..|+|||.+.... ++.++|||||||++|||++|+.||...
T Consensus 149 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~---------~~~~~DiwslG~il~el~~G~~pf~~~ 204 (324)
T cd05589 149 KEGMGFGDRTSTFCGTPEFLAPEVLTETS---------YTRAVDWWGLGVLIYEMLVGESPFPGD 204 (324)
T ss_pred ccCCCCCCcccccccCccccCHhHhcCCC---------CCcccchhhHHHHHHHHHhCCCCCCCC
Confidence 7532 2233456899999999876543 467999999999999999999999643
No 85
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=3.4e-34 Score=309.15 Aligned_cols=190 Identities=17% Similarity=0.190 Sum_probs=161.3
Q ss_pred ceeecCCcceEEEEEE-cCCcEEEEEEeecccc----CHHHHHHHHHHHhhc-CCCCcccceeEEEecCCcEEEEEeeCC
Q 004248 540 NLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV----KTEAYLLELDFFSKV-SHARLVPLLGHCMERENEKFLVYKYMP 613 (766)
Q Consensus 540 ~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~----~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~~lV~Ey~~ 613 (766)
++||+|+||.||+|+. .+++.||||++..... ..+.+.+|.+++..+ +||||+++++++.. .+..|+||||++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~-~~~~~iv~Ey~~ 79 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQT-PDRLFFVMEFVN 79 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEc-CCEEEEEEcCCC
Confidence 4799999999999995 5689999999975421 245678899998877 69999999996654 568999999999
Q ss_pred CCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcC--
Q 004248 614 NGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQG-- 691 (766)
Q Consensus 614 ~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~-- 691 (766)
+|+|.+++.+.. .+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++...
T Consensus 80 ~g~L~~~i~~~~-------~l~~~~~~~~~~ql~~~L~~lH~~---~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~ 149 (320)
T cd05590 80 GGDLMFHIQKSR-------RFDEARARFYAAEITSALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFN 149 (320)
T ss_pred CchHHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcC
Confidence 999999987543 389999999999999999999997 99999999999999999999999999987531
Q ss_pred -CCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 692 -GDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 692 -~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
.......||+.|+|||...... ++.++|||||||++|||+||+.||...
T Consensus 150 ~~~~~~~~gt~~y~aPE~~~~~~---------~~~~~DiwslG~il~el~~g~~Pf~~~ 199 (320)
T cd05590 150 GKTTSTFCGTPDYIAPEILQEML---------YGPSVDWWAMGVLLYEMLCGHAPFEAE 199 (320)
T ss_pred CCcccccccCccccCHHHHcCCC---------CCCccchhhhHHHHHHHhhCCCCCCCC
Confidence 2233456899999999876443 467999999999999999999999644
No 86
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=4.2e-34 Score=307.84 Aligned_cols=189 Identities=18% Similarity=0.220 Sum_probs=159.0
Q ss_pred ceeecCCcceEEEEEE-cCCcEEEEEEeecccc----CHHHHHHHHHHHhhc-CCCCcccceeEEEecCCcEEEEEeeCC
Q 004248 540 NLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV----KTEAYLLELDFFSKV-SHARLVPLLGHCMERENEKFLVYKYMP 613 (766)
Q Consensus 540 ~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~----~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~~lV~Ey~~ 613 (766)
++||+|+||.||+|+. .+++.||||.++.... ..+.+..|.+++... +||||+++++++.. ++..|+||||++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~-~~~~~lv~e~~~ 79 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQT-KEHLFFVMEYLN 79 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEc-CCEEEEEEcCCC
Confidence 4699999999999995 5688999999975432 234566777777654 89999999987655 568999999999
Q ss_pred CCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcC--
Q 004248 614 NGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQG-- 691 (766)
Q Consensus 614 ~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~-- 691 (766)
+|+|.+++.... .+++.+...++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 80 gg~L~~~~~~~~-------~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~ 149 (316)
T cd05592 80 GGDLMFHIQSSG-------RFDEARARFYAAEIICGLQFLHKK---GIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNG 149 (316)
T ss_pred CCcHHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHeEECCCCCEEEccCcCCeECCCC
Confidence 999999987543 388999999999999999999997 99999999999999999999999999997542
Q ss_pred -CCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 692 -GDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 692 -~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
.......||..|+|||...... ++.++|||||||++|||++|+.||..
T Consensus 150 ~~~~~~~~gt~~y~aPE~~~~~~---------~~~~~DvwslG~il~ell~G~~Pf~~ 198 (316)
T cd05592 150 EGKASTFCGTPDYIAPEILKGQK---------YNESVDWWSFGVLLYEMLIGQSPFHG 198 (316)
T ss_pred CCccccccCCccccCHHHHcCCC---------CCCcccchhHHHHHHHHHhCCCCCCC
Confidence 2233456899999999876543 46899999999999999999999954
No 87
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=4.6e-34 Score=308.34 Aligned_cols=190 Identities=18% Similarity=0.201 Sum_probs=158.5
Q ss_pred ceeecCCcceEEEEEE-cCCcEEEEEEeecccc----CHHHHHHHHH-HHhhcCCCCcccceeEEEecCCcEEEEEeeCC
Q 004248 540 NLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV----KTEAYLLELD-FFSKVSHARLVPLLGHCMERENEKFLVYKYMP 613 (766)
Q Consensus 540 ~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~----~~~~~~~E~~-~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey~~ 613 (766)
++||+|+||.||+|+. .+++.||+|.+..... ...++.+|.. +++.++|||||++++++.+ .+..|+||||++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~-~~~~~lv~e~~~ 79 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQT-AEKLYFVLDYVN 79 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEc-CCEEEEEEcCCC
Confidence 4799999999999995 5689999999975432 1345666654 6788999999999987655 568999999999
Q ss_pred CCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcC--
Q 004248 614 NGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQG-- 691 (766)
Q Consensus 614 ~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~-- 691 (766)
+|+|...+.+.. .+++.+...++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 80 ~~~L~~~l~~~~-------~~~~~~~~~~~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 149 (321)
T cd05603 80 GGELFFHLQRER-------CFLEPRARFYAAEVASAIGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEP 149 (321)
T ss_pred CCCHHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEccCCCCccCCCC
Confidence 999998886543 378888999999999999999987 99999999999999999999999999987531
Q ss_pred -CCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 692 -GDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 692 -~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
.......+|+.|+|||.+.... ++.++|||||||++|||+||+.||...
T Consensus 150 ~~~~~~~~gt~~y~aPE~~~~~~---------~~~~~DiwslG~il~el~~g~~pf~~~ 199 (321)
T cd05603 150 EETTSTFCGTPEYLAPEVLRKEP---------YDRTVDWWCLGAVLYEMLYGLPPFYSR 199 (321)
T ss_pred CCccccccCCcccCCHHHhcCCC---------CCCcCcccccchhhhhhhcCCCCCCCC
Confidence 2233456889999999875443 478999999999999999999999654
No 88
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=3.8e-34 Score=303.66 Aligned_cols=195 Identities=16% Similarity=0.151 Sum_probs=164.6
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeecccc---CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV---KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVY 609 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~ 609 (766)
++|+..+.||+|+||.||+|+. .+++.||||++..... ..+.+.+|++++++++||||+++++++.. ++..|+||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~ 79 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRR-RGKLYLVF 79 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEec-CCEEEEEE
Confidence 4688899999999999999996 4688999999975432 24678899999999999999999997765 56899999
Q ss_pred eeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhh
Q 004248 610 KYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCA 689 (766)
Q Consensus 610 Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~ 689 (766)
||++++.+..+.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 80 e~~~~~~l~~~~~~~-------~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~ 149 (287)
T cd07848 80 EYVEKNMLELLEEMP-------NGVPPEKVRSYIYQLIKAIHWCHKN---DIVHRDIKPENLLISHNDVLKLCDFGFARN 149 (287)
T ss_pred ecCCCCHHHHHHhcC-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccCccc
Confidence 999987766544322 2489999999999999999999987 999999999999999999999999999986
Q ss_pred cCCC----CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 690 QGGD----AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 690 ~~~~----~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
.... .....++..|+|||...... ++.++|||||||++|||++|+.||..
T Consensus 150 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~DiwslGvil~el~~g~~pf~~ 203 (287)
T cd07848 150 LSEGSNANYTEYVATRWYRSPELLLGAP---------YGKAVDMWSVGCILGELSDGQPLFPG 203 (287)
T ss_pred ccccccccccccccccccCCcHHHcCCC---------CCCchhHHhHHHHHHHHHhCCCCCCC
Confidence 5321 22346789999999876543 46899999999999999999999954
No 89
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-35 Score=276.23 Aligned_cols=217 Identities=16% Similarity=0.188 Sum_probs=177.0
Q ss_pred hCCCCccceeecCCcceEEEEE-EcCCcEEEEEEeecccc--CHHHHHHHHHHHhh-cCCCCcccceeEEEecCCcEEEE
Q 004248 533 TGDFSDANLIKNGHSGDLFRGI-LEGGIPVVIKRIDLQSV--KTEAYLLELDFFSK-VSHARLVPLLGHCMERENEKFLV 608 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~-~~~g~~vavK~l~~~~~--~~~~~~~E~~~l~~-l~H~niv~l~~~~~~~~~~~~lV 608 (766)
.++......||+|+||.|-+.+ ..+|+..|||++...-. .+++.++|+.+..+ ...|.+|+++|.+++ +..+++.
T Consensus 45 ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~r-egdvwIc 123 (282)
T KOG0984|consen 45 ADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFR-EGDVWIC 123 (282)
T ss_pred hhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhc-cccEEEe
Confidence 3445556789999999999888 57899999999976433 25678889986555 479999999998776 6789999
Q ss_pred EeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhh
Q 004248 609 YKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVC 688 (766)
Q Consensus 609 ~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~ 688 (766)
||.|+- +|+.+-++--. ....+++.-.-+||..|.+||.|||++ ..|||||+||+||||+.+|++|+||||++-
T Consensus 124 ME~M~t-Sldkfy~~v~~---~g~~ipE~vlGkIa~Svv~al~~L~~k--L~vIHRDvKPsNiLIn~~GqVKiCDFGIsG 197 (282)
T KOG0984|consen 124 MELMDT-SLDKFYRKVLK---KGGTIPEDVLGKIAVSVVHALEFLHSK--LSVIHRDVKPSNILINYDGQVKICDFGISG 197 (282)
T ss_pred HHHhhh-hHHHHHHHHHh---cCCcCchHHhhHhHHHHHHHHHHHHHH--hhhhhccCCcceEEEccCCcEEEcccccce
Confidence 999985 88776543111 113588999999999999999999997 689999999999999999999999999987
Q ss_pred hcCCCC-cc-ceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCCccccccceeeEE
Q 004248 689 AQGGDA-HQ-SRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSSRFGVKQQTTIIK 761 (766)
Q Consensus 689 ~~~~~~-~~-~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~~~~~~~~~~~~~ 761 (766)
.+.++. .+ ..|...|||||.+..+.... + |+.|+||||+|+.+.||++++.|++.+..+.+|+.++++
T Consensus 198 ~L~dSiAkt~daGCkpYmaPEri~~e~n~~-g----Y~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkqvVe 267 (282)
T KOG0984|consen 198 YLVDSIAKTMDAGCKPYMAPERINPELNQK-G----YSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQVVE 267 (282)
T ss_pred eehhhhHHHHhcCCCccCChhhcCcccCcc-c----ceeehhhhhhhhhhhhhhhccccccccCCHHHHHHHHhc
Confidence 764432 22 46788999999887764332 2 688999999999999999999999999999888877653
No 90
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=5.4e-34 Score=306.96 Aligned_cols=190 Identities=19% Similarity=0.220 Sum_probs=160.7
Q ss_pred ceeecCCcceEEEEEE-cCCcEEEEEEeecccc----CHHHHHHHHHHHhhc-CCCCcccceeEEEecCCcEEEEEeeCC
Q 004248 540 NLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV----KTEAYLLELDFFSKV-SHARLVPLLGHCMERENEKFLVYKYMP 613 (766)
Q Consensus 540 ~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~----~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~~lV~Ey~~ 613 (766)
+.||+|+||+||+|+. .+++.||||.++.... ..+.+..|..++... +||||+++++++.+ ++..|+||||++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~-~~~~~lv~ey~~ 79 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQT-KENLFFVMEYLN 79 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEe-CCEEEEEEeCCC
Confidence 4699999999999995 5688999999976432 244577788888764 89999999997765 568999999999
Q ss_pred CCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhc---
Q 004248 614 NGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQ--- 690 (766)
Q Consensus 614 ~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~--- 690 (766)
+|+|.+++.+.. .+++.++..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++..
T Consensus 80 ~g~L~~~l~~~~-------~~~~~~~~~~~~qi~~al~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 149 (316)
T cd05619 80 GGDLMFHIQSCH-------KFDLPRATFYAAEIICGLQFLHSK---GIVYRDLKLDNILLDTDGHIKIADFGMCKENMLG 149 (316)
T ss_pred CCcHHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEccCCcceECCCC
Confidence 999999997543 388999999999999999999997 9999999999999999999999999998753
Q ss_pred CCCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 691 GGDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 691 ~~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
........+|..|+|||...... ++.++|||||||++|||+||+.||...
T Consensus 150 ~~~~~~~~gt~~y~aPE~~~~~~---------~~~~~DvwslG~il~el~~G~~pf~~~ 199 (316)
T cd05619 150 DAKTCTFCGTPDYIAPEILLGQK---------YNTSVDWWSFGVLLYEMLIGQSPFHGH 199 (316)
T ss_pred CCceeeecCCccccCHHHHcCCC---------CCchhhhhhHHHHHHHHHhCCCCCCCC
Confidence 12233456889999999876543 478999999999999999999999543
No 91
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=3.1e-34 Score=311.79 Aligned_cols=196 Identities=18% Similarity=0.218 Sum_probs=163.3
Q ss_pred CCCccceeecCCcceEEEEEE-cCCcEEEEEEeecccc---CHHHHHHHHHHHhhcCCCCcccceeEEEecC----CcEE
Q 004248 535 DFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV---KTEAYLLELDFFSKVSHARLVPLLGHCMERE----NEKF 606 (766)
Q Consensus 535 ~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~----~~~~ 606 (766)
+|+..+.||+|+||.||+|+. .+|+.||||++..... ...++.+|++++++++||||+++++++.... ...|
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 477889999999999999994 5789999999864322 2456889999999999999999999775422 2479
Q ss_pred EEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchh
Q 004248 607 LVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSE 686 (766)
Q Consensus 607 lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~ 686 (766)
+|||||+ ++|.+++.+.. .+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 81 lv~e~~~-~~L~~~l~~~~-------~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kL~Dfg~ 149 (338)
T cd07859 81 VVFELME-SDLHQVIKAND-------DLTPEHHQFFLYQLLRALKYIHTA---NVFHRDLKPKNILANADCKLKICDFGL 149 (338)
T ss_pred EEEecCC-CCHHHHHHhcc-------cCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEccCcc
Confidence 9999996 69999886543 389999999999999999999998 999999999999999999999999999
Q ss_pred hhhcCCC------CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 687 VCAQGGD------AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 687 a~~~~~~------~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
++..... .....+|+.|+|||.+...... ++.++|||||||++|||+||+.||..
T Consensus 150 ~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~-------~~~~~DvwSlGvvl~el~tg~~pf~~ 210 (338)
T cd07859 150 ARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSK-------YTPAIDIWSIGCIFAEVLTGKPLFPG 210 (338)
T ss_pred ccccccccCccccccCCCCCCCcCCHHHHhccccc-------cCchhHHHHHHHHHHHHHcCCCCCCC
Confidence 9754211 1234689999999986542111 57899999999999999999999954
No 92
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=5e-34 Score=308.23 Aligned_cols=195 Identities=15% Similarity=0.143 Sum_probs=163.2
Q ss_pred CCCccceeecCCcceEEEEEE-cCCcEEEEEEeecccc----CHHHHHHHHHHHhhcCC-CCcccceeEEEecCCcEEEE
Q 004248 535 DFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV----KTEAYLLELDFFSKVSH-ARLVPLLGHCMERENEKFLV 608 (766)
Q Consensus 535 ~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~----~~~~~~~E~~~l~~l~H-~niv~l~~~~~~~~~~~~lV 608 (766)
+|+..++||+|+||.||+|+. .+|+.||||.+..... ..+.+..|.++++.+.| ++|+++++++.. ++..|+|
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~-~~~~~lv 79 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQT-VDRLYFV 79 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEec-CCEEEEE
Confidence 467789999999999999984 5789999999975432 23567889999998865 667778775544 5689999
Q ss_pred EeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhh
Q 004248 609 YKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVC 688 (766)
Q Consensus 609 ~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~ 688 (766)
|||+++|+|.+++.+.. .+++.++..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++
T Consensus 80 ~Ey~~~g~L~~~i~~~~-------~l~~~~~~~i~~qi~~al~~lH~~---~ivHrDikp~Nill~~~~~ikL~Dfg~~~ 149 (323)
T cd05615 80 MEYVNGGDLMYHIQQVG-------KFKEPQAVFYAAEISVGLFFLHRR---GIIYRDLKLDNVMLDSEGHIKIADFGMCK 149 (323)
T ss_pred EcCCCCCcHHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEecccccc
Confidence 99999999999987543 389999999999999999999997 99999999999999999999999999987
Q ss_pred hcCC---CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 689 AQGG---DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 689 ~~~~---~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
.... ......||..|+|||.+.... ++.++||||+||++|||+||+.||...
T Consensus 150 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~---------~~~~~DiwslGvil~elltG~~pf~~~ 204 (323)
T cd05615 150 EHMVDGVTTRTFCGTPDYIAPEIIAYQP---------YGKSVDWWAYGVLLYEMLAGQPPFDGE 204 (323)
T ss_pred ccCCCCccccCccCCccccCHHHHcCCC---------CCCccchhhhHHHHHHHHhCCCCCCCC
Confidence 5421 223346889999999876543 478999999999999999999999644
No 93
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=6.3e-34 Score=306.50 Aligned_cols=190 Identities=16% Similarity=0.211 Sum_probs=160.9
Q ss_pred ceeecCCcceEEEEEE-cCCcEEEEEEeecccc----CHHHHHHHHHHHhhc-CCCCcccceeEEEecCCcEEEEEeeCC
Q 004248 540 NLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV----KTEAYLLELDFFSKV-SHARLVPLLGHCMERENEKFLVYKYMP 613 (766)
Q Consensus 540 ~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~----~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~~lV~Ey~~ 613 (766)
++||+|+||.||+|+. .+|+.||||.++.... ..+.+..|.+++... +||||+++++++.. ++..|+||||++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~-~~~~~lv~E~~~ 79 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQT-KEHLFFVMEFLN 79 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEe-CCEEEEEECCCC
Confidence 4799999999999995 5689999999976432 244577788888765 89999999997765 568999999999
Q ss_pred CCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhc---
Q 004248 614 NGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQ--- 690 (766)
Q Consensus 614 ~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~--- 690 (766)
+|+|.+++.++. .+++.++..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 80 ~g~L~~~i~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 149 (316)
T cd05620 80 GGDLMFHIQDKG-------RFDLYRATFYAAEIVCGLQFLHSK---GIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFG 149 (316)
T ss_pred CCcHHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEeCccCCCeecccC
Confidence 999999987543 388999999999999999999997 9999999999999999999999999998743
Q ss_pred CCCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 691 GGDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 691 ~~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
........||..|+|||.+.... ++.++||||+||++|||++|+.||...
T Consensus 150 ~~~~~~~~gt~~y~aPE~~~~~~---------~~~~~DiwslGvil~el~~g~~Pf~~~ 199 (316)
T cd05620 150 DNRASTFCGTPDYIAPEILQGLK---------YTFSVDWWSFGVLLYEMLIGQSPFHGD 199 (316)
T ss_pred CCceeccCCCcCccCHHHHcCCC---------CCcccchhhhHHHHHHHHhCCCCCCCC
Confidence 22234456899999999886544 468999999999999999999999543
No 94
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=7.4e-34 Score=308.21 Aligned_cols=197 Identities=20% Similarity=0.245 Sum_probs=168.9
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC--HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEe
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK--TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYK 610 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~--~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~E 610 (766)
++|+..+.||+|+||.||+|.. .++..||+|.+...... .+++.+|++++++++|||||+++++|.+ ++..++|||
T Consensus 5 ~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e 83 (333)
T cd06650 5 DDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS-DGEISICME 83 (333)
T ss_pred hhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEE-CCEEEEEEe
Confidence 6789999999999999999995 46889999988754322 4679999999999999999999998876 568999999
Q ss_pred eCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhc
Q 004248 611 YMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQ 690 (766)
Q Consensus 611 y~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~ 690 (766)
|+++|+|.+++.+.+ .+++.....++.|++.||+|||+. .+|+||||||+|||+++++.+||+|||+++..
T Consensus 84 ~~~~~~L~~~l~~~~-------~~~~~~~~~~~~~l~~~l~~lH~~--~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~ 154 (333)
T cd06650 84 HMDGGSLDQVLKKAG-------RIPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL 154 (333)
T ss_pred cCCCCcHHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHhc--CCEEecCCChhhEEEcCCCCEEEeeCCcchhh
Confidence 999999999997543 378999999999999999999974 26999999999999999999999999998765
Q ss_pred CC-CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 691 GG-DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 691 ~~-~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
.. ......++..|+|||...+.. ++.++|||||||++|||++|+.||...
T Consensus 155 ~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~DvwslG~il~~l~~g~~p~~~~ 205 (333)
T cd06650 155 IDSMANSFVGTRSYMSPERLQGTH---------YSVQSDIWSMGLSLVEMAIGRYPIPPP 205 (333)
T ss_pred hhhccccCCCCccccCHHHhcCCC---------CCcHHHHHHHHHHHHHHHHCCCCCCCc
Confidence 32 233446788999999876443 467999999999999999999999643
No 95
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=4.8e-34 Score=308.73 Aligned_cols=191 Identities=19% Similarity=0.196 Sum_probs=160.0
Q ss_pred ceeecCCcceEEEEE-EcCCcEEEEEEeecccc----CHHHHHHHHH-HHhhcCCCCcccceeEEEecCCcEEEEEeeCC
Q 004248 540 NLIKNGHSGDLFRGI-LEGGIPVVIKRIDLQSV----KTEAYLLELD-FFSKVSHARLVPLLGHCMERENEKFLVYKYMP 613 (766)
Q Consensus 540 ~~ig~G~~g~Vy~~~-~~~g~~vavK~l~~~~~----~~~~~~~E~~-~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey~~ 613 (766)
++||+|+||.||+|+ ..+|+.||||++..... ..+++.+|.. +++.++||||+++++++.. ++..|+||||++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~-~~~~~lv~e~~~ 79 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQT-TEKLYFVLDFVN 79 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEec-CCEEEEEEcCCC
Confidence 469999999999998 45789999999975422 1345666665 4677999999999987765 568999999999
Q ss_pred CCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcC--
Q 004248 614 NGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQG-- 691 (766)
Q Consensus 614 ~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~-- 691 (766)
+|+|.+++.+.. .+++.++..++.||+.||+|||+. +|+||||||+|||+++++.+||+|||+++...
T Consensus 80 ~~~L~~~l~~~~-------~~~~~~~~~~~~qi~~al~~lH~~---givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~ 149 (325)
T cd05604 80 GGELFFHLQRER-------SFPEPRARFYAAEIASALGYLHSI---NIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQ 149 (325)
T ss_pred CCCHHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEeecCCcccCCCC
Confidence 999999886543 389999999999999999999997 99999999999999999999999999987531
Q ss_pred -CCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCCc
Q 004248 692 -GDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSSR 750 (766)
Q Consensus 692 -~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~~ 750 (766)
.......||..|+|||.+.... ++.++|||||||++|||++|+.||...+
T Consensus 150 ~~~~~~~~gt~~y~aPE~~~~~~---------~~~~~DvwslG~il~el~~G~~pf~~~~ 200 (325)
T cd05604 150 SDTTTTFCGTPEYLAPEVIRKQP---------YDNTVDWWCLGAVLYEMLYGLPPFYCRD 200 (325)
T ss_pred CCCcccccCChhhCCHHHHcCCC---------CCCcCccccccceehhhhcCCCCCCCCC
Confidence 2233456899999999876544 4679999999999999999999996543
No 96
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-34 Score=324.76 Aligned_cols=203 Identities=19% Similarity=0.224 Sum_probs=167.3
Q ss_pred CCCccceeecCCcceEEEEEEcCC-cEEEEEEeeccccC-HHHHHHHHHHHhhcC-CCCccccee-EEEec--C---CcE
Q 004248 535 DFSDANLIKNGHSGDLFRGILEGG-IPVVIKRIDLQSVK-TEAYLLELDFFSKVS-HARLVPLLG-HCMER--E---NEK 605 (766)
Q Consensus 535 ~~~~~~~ig~G~~g~Vy~~~~~~g-~~vavK~l~~~~~~-~~~~~~E~~~l~~l~-H~niv~l~~-~~~~~--~---~~~ 605 (766)
++.+.+.|.+|||+.||.|....+ ..||+|++-..... .+...+||++|++|+ |||||.+++ ..... . -++
T Consensus 38 ~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~Ev 117 (738)
T KOG1989|consen 38 RVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWEV 117 (738)
T ss_pred EEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeEE
Confidence 345678999999999999996655 99999998655433 677899999999997 999999999 33221 1 268
Q ss_pred EEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccch
Q 004248 606 FLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLS 685 (766)
Q Consensus 606 ~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG 685 (766)
+|.||||+||.|-+++..+.. ..|++.++++|+.|+++|+++||. +.|+|||||||.|||||+.+++.||||||
T Consensus 118 llLmEyC~gg~Lvd~mn~Rlq-----~~lte~eVLkIf~dv~~AVa~mH~-~~pPiIHRDLKiENvLls~~g~~KLCDFG 191 (738)
T KOG1989|consen 118 LLLMEYCKGGSLVDFMNTRLQ-----TRLTEDEVLKIFYDVCEAVAAMHY-LKPPIIHRDLKIENVLLSADGNYKLCDFG 191 (738)
T ss_pred EeehhhccCCcHHHHHHHHHh-----ccCChHHHHHHHHHHHHHHHHHhc-CCCccchhhhhhhheEEcCCCCEEeCccc
Confidence 999999999999999986543 349999999999999999999998 57899999999999999999999999999
Q ss_pred hhhhcCCCC------------ccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 686 EVCAQGGDA------------HQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 686 ~a~~~~~~~------------~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
.|...-... -....|+.|++||.+.... ..+ +++|+|||++||+||-|+....||...
T Consensus 192 Satt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlys--g~p----I~eKsDIWALGclLYkLCy~t~PFe~s 261 (738)
T KOG1989|consen 192 SATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYS--GLP----IGEKSDIWALGCLLYKLCYFTTPFEES 261 (738)
T ss_pred ccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhc--CCC----CcchhHHHHHHHHHHHHHHhCCCcCcC
Confidence 986541111 1234689999999875422 112 799999999999999999999999644
No 97
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=5e-34 Score=312.22 Aligned_cols=195 Identities=17% Similarity=0.193 Sum_probs=160.7
Q ss_pred CCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC--HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEee
Q 004248 535 DFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK--TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKY 611 (766)
Q Consensus 535 ~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~--~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey 611 (766)
+|+..++||+|+||.||+|+. .+|+.||||.+...... .+.+.+|++++++++|+||+++++++.. ++..|+||||
T Consensus 75 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e~ 153 (353)
T PLN00034 75 ELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDH-NGEIQVLLEF 153 (353)
T ss_pred HHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEecc-CCeEEEEEec
Confidence 355678999999999999984 57899999998654322 4679999999999999999999997755 5689999999
Q ss_pred CCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcC
Q 004248 612 MPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQG 691 (766)
Q Consensus 612 ~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~ 691 (766)
+++|+|.+.. ..++..+..++.||+.||+|||+. +|+||||||+|||+++++.+||+|||+++...
T Consensus 154 ~~~~~L~~~~-----------~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~ 219 (353)
T PLN00034 154 MDGGSLEGTH-----------IADEQFLADVARQILSGIAYLHRR---HIVHRDIKPSNLLINSAKNVKIADFGVSRILA 219 (353)
T ss_pred CCCCcccccc-----------cCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEcccccceecc
Confidence 9999986532 256777889999999999999997 99999999999999999999999999998653
Q ss_pred CC---CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 692 GD---AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 692 ~~---~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
.. .....||..|+|||.+........ ..+.++|||||||++|||++|+.||..
T Consensus 220 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~----~~~~~~DvwslGvil~el~~g~~pf~~ 275 (353)
T PLN00034 220 QTMDPCNSSVGTIAYMSPERINTDLNHGA----YDGYAGDIWSLGVSILEFYLGRFPFGV 275 (353)
T ss_pred cccccccccccCccccCccccccccccCc----CCCcchhHHHHHHHHHHHHhCCCCCCC
Confidence 22 234578999999998643211100 035689999999999999999999963
No 98
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=5.9e-34 Score=308.22 Aligned_cols=188 Identities=19% Similarity=0.166 Sum_probs=161.2
Q ss_pred ceeecCCcceEEEEEE-cCCcEEEEEEeeccccC----HHHHHHHHHHHhhc-CCCCcccceeEEEecCCcEEEEEeeCC
Q 004248 540 NLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK----TEAYLLELDFFSKV-SHARLVPLLGHCMERENEKFLVYKYMP 613 (766)
Q Consensus 540 ~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~----~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~~lV~Ey~~ 613 (766)
++||+|+||.||+|+. .+++.||||+++..... .+.+.+|+.++.++ +||||+++++++.. .+..|+||||++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~-~~~~~lv~e~~~ 79 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQT-TSRLFLVIEYVN 79 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEe-CCEEEEEEeCCC
Confidence 4799999999999995 56889999999764322 34688999999988 69999999996654 568999999999
Q ss_pred CCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhc---
Q 004248 614 NGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQ--- 690 (766)
Q Consensus 614 ~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~--- 690 (766)
+|+|.+++...+ .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 80 ~~~L~~~~~~~~-------~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~ 149 (327)
T cd05617 80 GGDLMFHMQRQR-------KLPEEHARFYAAEICIALNFLHER---GIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGP 149 (327)
T ss_pred CCcHHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEeCCCCEEEeccccceeccCC
Confidence 999999886543 389999999999999999999997 9999999999999999999999999998753
Q ss_pred CCCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCC
Q 004248 691 GGDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNL 747 (766)
Q Consensus 691 ~~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~ 747 (766)
........||+.|+|||.+.... ++.++|||||||++|||+||+.||.
T Consensus 150 ~~~~~~~~gt~~y~aPE~~~~~~---------~~~~~DiwslGvil~ell~g~~pf~ 197 (327)
T cd05617 150 GDTTSTFCGTPNYIAPEILRGEE---------YGFSVDWWALGVLMFEMMAGRSPFD 197 (327)
T ss_pred CCceecccCCcccCCHHHHCCCC---------CCchheeehhHHHHHHHHhCCCCCC
Confidence 22233456899999999876544 4689999999999999999999995
No 99
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=1.1e-33 Score=300.69 Aligned_cols=198 Identities=22% Similarity=0.283 Sum_probs=163.4
Q ss_pred CCCCccceeecCCcceEEEEEE--cCCcEEEEEEeecccc---CHHHHHHHHHHHhhc---CCCCcccceeEEEe----c
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL--EGGIPVVIKRIDLQSV---KTEAYLLELDFFSKV---SHARLVPLLGHCME----R 601 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~--~~g~~vavK~l~~~~~---~~~~~~~E~~~l~~l---~H~niv~l~~~~~~----~ 601 (766)
++|+..+.||+|+||.||+|+. .+++.||||+++.... ....+.+|+++++++ +||||++++++|.. .
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 3688899999999999999985 3478899999865432 234677888887766 69999999998752 2
Q ss_pred CCcEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEe
Q 004248 602 ENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRL 681 (766)
Q Consensus 602 ~~~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl 681 (766)
....++||||++ |+|.+++..... ..+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||
T Consensus 81 ~~~~~lv~e~~~-~~l~~~~~~~~~-----~~~~~~~~~~i~~qi~~aL~~lH~~---~iiH~dlkp~Nil~~~~~~~kl 151 (290)
T cd07862 81 ETKLTLVFEHVD-QDLTTYLDKVPE-----PGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKL 151 (290)
T ss_pred CCcEEEEEccCC-CCHHHHHHhCCC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEcCCCCEEE
Confidence 346899999997 699999875432 2489999999999999999999997 9999999999999999999999
Q ss_pred ccchhhhhcCC--CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 682 GSLSEVCAQGG--DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 682 ~DFG~a~~~~~--~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
+|||+++.... ......+|..|+|||.+.... ++.++|||||||++|||++|++||...
T Consensus 152 ~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~DiwslG~il~el~~g~~~f~~~ 212 (290)
T cd07862 152 ADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSS---------YATPVDLWSVGCIFAEMFRRKPLFRGS 212 (290)
T ss_pred ccccceEeccCCcccccccccccccChHHHhCCC---------CCCccchHHHHHHHHHHHcCCCCcCCC
Confidence 99999976532 233456789999999875443 467999999999999999999998543
No 100
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=6.8e-34 Score=314.44 Aligned_cols=189 Identities=21% Similarity=0.224 Sum_probs=163.2
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccCHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEeeC
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYM 612 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey~ 612 (766)
++|+..+.||+|+||.||+|.. .+++.||+|+.. .+.+.+|++++++++|||||++++++.. +...++|+||+
T Consensus 92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~-----~~~~~~E~~il~~l~HpnIv~~~~~~~~-~~~~~lv~e~~ 165 (391)
T PHA03212 92 AGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ-----RGGTATEAHILRAINHPSIIQLKGTFTY-NKFTCLILPRY 165 (391)
T ss_pred CCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh-----hhhhHHHHHHHHhCCCCCCCCEeEEEEE-CCeeEEEEecC
Confidence 5699999999999999999994 678999999753 3457899999999999999999997765 56789999999
Q ss_pred CCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcC-
Q 004248 613 PNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQG- 691 (766)
Q Consensus 613 ~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~- 691 (766)
. ++|.+++..+. .+++.+++.++.|++.||+|||+. +||||||||+|||++.++.+||+|||+|+...
T Consensus 166 ~-~~L~~~l~~~~-------~l~~~~~~~i~~qi~~aL~ylH~~---~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~ 234 (391)
T PHA03212 166 K-TDLYCYLAAKR-------NIAICDILAIERSVLRAIQYLHEN---RIIHRDIKAENIFINHPGDVCLGDFGAACFPVD 234 (391)
T ss_pred C-CCHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHhEEEcCCCCEEEEeCCccccccc
Confidence 6 69998886543 389999999999999999999997 99999999999999999999999999997532
Q ss_pred ---CCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 692 ---GDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 692 ---~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
.......||+.|+|||.+.... ++.++|||||||++|||+||+.||+.
T Consensus 235 ~~~~~~~~~~gt~~y~aPE~~~~~~---------~~~~~DiwSlGvil~elltg~~p~~~ 285 (391)
T PHA03212 235 INANKYYGWAGTIATNAPELLARDP---------YGPAVDIWSAGIVLFEMATCHDSLFE 285 (391)
T ss_pred ccccccccccCccCCCChhhhcCCC---------CCcHHHHHHHHHHHHHHHHCCCCcCC
Confidence 1223457899999999886544 46899999999999999999998854
No 101
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=4.4e-34 Score=308.07 Aligned_cols=190 Identities=18% Similarity=0.182 Sum_probs=162.7
Q ss_pred ceeecCCcceEEEEEE----cCCcEEEEEEeeccccC---HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEeeC
Q 004248 540 NLIKNGHSGDLFRGIL----EGGIPVVIKRIDLQSVK---TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYM 612 (766)
Q Consensus 540 ~~ig~G~~g~Vy~~~~----~~g~~vavK~l~~~~~~---~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey~ 612 (766)
+.||+|+||.||+++. .+|+.||+|++...... ...+.+|++++++++||||+++++++.. ++..|+||||+
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-~~~~~lv~e~~ 80 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQT-EGKLYLILDFL 80 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEc-CCEEEEEEcCC
Confidence 6799999999999874 46899999999754322 3467889999999999999999997765 56899999999
Q ss_pred CCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcCC
Q 004248 613 PNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGG 692 (766)
Q Consensus 613 ~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~~ 692 (766)
++|+|.+++.+.. .+++.++..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++....
T Consensus 81 ~~~~L~~~l~~~~-------~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~ 150 (318)
T cd05582 81 RGGDLFTRLSKEV-------MFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESID 150 (318)
T ss_pred CCCcHHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHeEECCCCcEEEeeccCCcccCC
Confidence 9999999996543 389999999999999999999997 999999999999999999999999999876532
Q ss_pred C---CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 693 D---AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 693 ~---~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
. .....+|..|+|||...... ++.++|||||||++|||+||+.||...
T Consensus 151 ~~~~~~~~~g~~~y~aPE~~~~~~---------~~~~~DiwslG~il~el~tg~~p~~~~ 201 (318)
T cd05582 151 HEKKAYSFCGTVEYMAPEVVNRRG---------HTQSADWWSFGVLMFEMLTGSLPFQGK 201 (318)
T ss_pred CCCceecccCChhhcCHHHHcCCC---------CCCccceeccceEeeeeccCCCCCCCC
Confidence 2 23456789999999876443 467999999999999999999999543
No 102
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=1e-33 Score=300.33 Aligned_cols=196 Identities=21% Similarity=0.202 Sum_probs=166.8
Q ss_pred CCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC----HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEE
Q 004248 535 DFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK----TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVY 609 (766)
Q Consensus 535 ~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~----~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~ 609 (766)
.|+..++||+|+||+||++.. .+++.||||++...... ...+.+|++++++++||||+++++.+.. ++..++||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~ 79 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYET-KDALCLVL 79 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecC-CCeEEEEE
Confidence 377889999999999999994 57899999999754322 3457889999999999999999987755 56899999
Q ss_pred eeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhh
Q 004248 610 KYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCA 689 (766)
Q Consensus 610 Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~ 689 (766)
||+++|+|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.
T Consensus 80 e~~~~~~L~~~~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~ 151 (285)
T cd05605 80 TLMNGGDLKFHIYNMGN-----PGFDEERAVFYAAEITCGLEDLHRE---RIVYRDLKPENILLDDYGHIRISDLGLAVE 151 (285)
T ss_pred eccCCCcHHHHHHhcCc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHEEECCCCCEEEeeCCCcee
Confidence 99999999998865322 2489999999999999999999997 999999999999999999999999999876
Q ss_pred cCCC--CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 690 QGGD--AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 690 ~~~~--~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
.... .....++..|+|||.+.... ++.++||||+||++|||++|+.||..
T Consensus 152 ~~~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~Diws~G~~l~el~~g~~pf~~ 203 (285)
T cd05605 152 IPEGETIRGRVGTVGYMAPEVVKNER---------YTFSPDWWGLGCLIYEMIEGKSPFRQ 203 (285)
T ss_pred cCCCCccccccCCCCccCcHHhcCCC---------CCccccchhHHHHHHHHHHCCCCCCC
Confidence 5322 23346788999999876443 46789999999999999999999964
No 103
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=1.1e-33 Score=305.85 Aligned_cols=190 Identities=19% Similarity=0.204 Sum_probs=157.9
Q ss_pred ceeecCCcceEEEEEE-cCCcEEEEEEeecccc----CHHHHHHHHH-HHhhcCCCCcccceeEEEecCCcEEEEEeeCC
Q 004248 540 NLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV----KTEAYLLELD-FFSKVSHARLVPLLGHCMERENEKFLVYKYMP 613 (766)
Q Consensus 540 ~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~----~~~~~~~E~~-~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey~~ 613 (766)
+.||+|+||.||+|+. .+++.||+|.+..... ...++.+|.. +++.++||||+++++++.. ++..|+||||++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~-~~~~~lv~e~~~ 79 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQT-ADKLYFVLDYIN 79 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEc-CCeEEEEEeCCC
Confidence 4699999999999995 4678999999975432 1234555554 5678999999999987765 568999999999
Q ss_pred CCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcC--
Q 004248 614 NGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQG-- 691 (766)
Q Consensus 614 ~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~-- 691 (766)
+|+|.+++.... .+++.+...++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 80 ~~~L~~~~~~~~-------~~~~~~~~~~~~qi~~~L~~lH~~---giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~ 149 (325)
T cd05602 80 GGELFYHLQRER-------CFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEH 149 (325)
T ss_pred CCcHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEEccCCCCcccccC
Confidence 999999997543 377888889999999999999997 99999999999999999999999999987532
Q ss_pred -CCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 692 -GDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 692 -~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
.......||..|+|||.+.... ++.++||||+||++|||++|+.||...
T Consensus 150 ~~~~~~~~gt~~y~aPE~~~~~~---------~~~~~DiwslG~il~el~~g~~pf~~~ 199 (325)
T cd05602 150 NGTTSTFCGTPEYLAPEVLHKQP---------YDRTVDWWCLGAVLYEMLYGLPPFYSR 199 (325)
T ss_pred CCCcccccCCccccCHHHHcCCC---------CCCccccccccHHHHHHhcCCCCCCCC
Confidence 2233456899999999876543 467999999999999999999999643
No 104
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=8.9e-34 Score=299.95 Aligned_cols=191 Identities=18% Similarity=0.202 Sum_probs=160.9
Q ss_pred eecCCcceEEEEEE-cCCcEEEEEEeeccccC----HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEeeCCCCC
Q 004248 542 IKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK----TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGD 616 (766)
Q Consensus 542 ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~----~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey~~~Gs 616 (766)
||+|+||+||++.. .+|+.||||++...... .+.+..|++++++++||||+++.+++.. ++..|+|||||++|+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~-~~~~~lv~e~~~~g~ 79 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQT-KTDLCLVMTIMNGGD 79 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcC-CCeEEEEEeCCCCCC
Confidence 69999999999984 57899999999754322 3567889999999999999999886654 567999999999999
Q ss_pred hhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcCCC---
Q 004248 617 LSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGD--- 693 (766)
Q Consensus 617 L~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~~~--- 693 (766)
|.+++..... ....+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.....
T Consensus 80 L~~~~~~~~~---~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~ 153 (280)
T cd05608 80 LRYHIYNVDE---ENPGFPEPRACFYTAQIISGLEHLHQR---RIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSK 153 (280)
T ss_pred HHHHHHhccc---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCccceecCCCCcc
Confidence 9988854321 123589999999999999999999997 9999999999999999999999999998765322
Q ss_pred CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 694 AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 694 ~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
.....+|..|+|||...... ++.++|||||||++|||+||+.||..
T Consensus 154 ~~~~~g~~~y~aPE~~~~~~---------~~~~~DvwslG~il~el~~g~~pf~~ 199 (280)
T cd05608 154 TKGYAGTPGFMAPELLQGEE---------YDFSVDYFALGVTLYEMIAARGPFRA 199 (280)
T ss_pred ccccCCCcCccCHHHhcCCC---------CCccccHHHHHHHHHHHHhCCCCCCC
Confidence 22346788999999886544 46799999999999999999999954
No 105
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-34 Score=315.02 Aligned_cols=202 Identities=18% Similarity=0.238 Sum_probs=168.6
Q ss_pred CCccceeecCCcceEEEEE-EcCCcEEEEEEeecccc--CHHHHHHHHHHHhhcCCCCcccceeEEEec-----CCcEEE
Q 004248 536 FSDANLIKNGHSGDLFRGI-LEGGIPVVIKRIDLQSV--KTEAYLLELDFFSKVSHARLVPLLGHCMER-----ENEKFL 607 (766)
Q Consensus 536 ~~~~~~ig~G~~g~Vy~~~-~~~g~~vavK~l~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-----~~~~~l 607 (766)
+...+.+|+|+||.||+|+ ..+|+.||||.++.... ..+..-+|+++|++++|||||++++.-.+. .....+
T Consensus 15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vl 94 (732)
T KOG4250|consen 15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVL 94 (732)
T ss_pred eeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceE
Confidence 3446789999999999999 78899999999976433 267889999999999999999999853321 134689
Q ss_pred EEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeC--CCCc--EEecc
Q 004248 608 VYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLD--DKFE--VRLGS 683 (766)
Q Consensus 608 V~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~--~~~~--~kl~D 683 (766)
|||||++|||+..|.+-. ....|++.+.+.+..+++.||.|||++ +||||||||.||++- .+|+ -||+|
T Consensus 95 vmEyC~gGsL~~~L~~PE----N~~GLpE~e~l~lL~d~~~al~~LrEn---~IvHRDlKP~NIvl~~Gedgq~IyKLtD 167 (732)
T KOG4250|consen 95 VMEYCSGGSLRKVLNSPE----NAYGLPESEFLDLLSDLVSALRHLREN---GIVHRDLKPGNIVLQIGEDGQSIYKLTD 167 (732)
T ss_pred EEeecCCCcHHHHhcCcc----cccCCCHHHHHHHHHHHHHHHHHHHHc---CceeccCCCCcEEEeecCCCceEEeeec
Confidence 999999999999997532 234599999999999999999999987 999999999999984 3444 79999
Q ss_pred chhhhhcCCC--CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCCccc
Q 004248 684 LSEVCAQGGD--AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSSRFG 752 (766)
Q Consensus 684 FG~a~~~~~~--~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~~~~ 752 (766)
||.||..++. ....+||+.|.+||.++...+ ++.-+|.|||||++||.+||..||.+..-.
T Consensus 168 fG~Arel~d~s~~~S~vGT~~YLhPel~E~q~~--------y~~tVDLWS~GvtlY~caTG~lPF~p~~~p 230 (732)
T KOG4250|consen 168 FGAARELDDNSLFTSLVGTEEYLHPELYERQKK--------YTATVDLWSFGVTLYECATGELPFIPFGGP 230 (732)
T ss_pred ccccccCCCCCeeeeecCchhhcChHHHhhccC--------cCceeehhhhhhHHHHHhccCCCCCcCCCc
Confidence 9999988543 456789999999999885222 578899999999999999999999655444
No 106
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=5.1e-36 Score=291.09 Aligned_cols=207 Identities=21% Similarity=0.254 Sum_probs=170.7
Q ss_pred CccceeecCCcceEEEEE-EcCCcEEEEEEeeccccC--HHHHHHHHHHHhhc-CCCCcccceeEEEecCCcEEEEEeeC
Q 004248 537 SDANLIKNGHSGDLFRGI-LEGGIPVVIKRIDLQSVK--TEAYLLELDFFSKV-SHARLVPLLGHCMERENEKFLVYKYM 612 (766)
Q Consensus 537 ~~~~~ig~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~--~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~~lV~Ey~ 612 (766)
+....||.|+||+|+|.. .+.|+..|||+++..... +++++.|.+...+- +.||||+++|.++. ++..|+.||.|
T Consensus 67 qdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~-EGdcWiCMELM 145 (361)
T KOG1006|consen 67 QDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFS-EGDCWICMELM 145 (361)
T ss_pred HHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhc-CCceeeeHHHH
Confidence 345789999999999998 678999999999876543 66899999865554 78999999999987 67899999999
Q ss_pred CCCChhhhhhc---cCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhh
Q 004248 613 PNGDLSSSLYR---KTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCA 689 (766)
Q Consensus 613 ~~GsL~~~l~~---~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~ 689 (766)
+- +|+.+... ... ..+++.-.-.|+..++.||.||.+. .+|||||+||+|||+|..|.+|+||||++..
T Consensus 146 d~-SlDklYk~vy~vq~-----~~ipE~Ilg~ItvatV~AL~yLK~~--lkiIHRDvKPSNILldr~G~vKLCDFGIcGq 217 (361)
T KOG1006|consen 146 DI-SLDKLYKRVYSVQK-----SRIPENILGHITVATVDALDYLKEE--LKIIHRDVKPSNILLDRHGDVKLCDFGICGQ 217 (361)
T ss_pred hh-hHHHHHHHHHHHHh-----ccCcHhhhhheeeeehhHHHHHHHH--hhhhhccCChhheEEecCCCEeeecccchHh
Confidence 74 77655432 111 2488888888999999999999876 5899999999999999999999999999876
Q ss_pred cCCC--CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCCccccccceee
Q 004248 690 QGGD--AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSSRFGVKQQTTI 759 (766)
Q Consensus 690 ~~~~--~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~~~~~~~~~~~ 759 (766)
+.+. .+...|.+.|||||.+.....|| +.++||||+|++|||++||+.|+..+..-.+|+.++
T Consensus 218 Lv~SiAkT~daGCrpYmAPERi~p~~~gy-------DiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~V 282 (361)
T KOG1006|consen 218 LVDSIAKTVDAGCRPYMAPERIDPSDKGY-------DIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQV 282 (361)
T ss_pred HHHHHHhhhccCCccccChhccCCccCCc-------chhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHH
Confidence 5333 23456889999999998877664 789999999999999999999998777766666554
No 107
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-35 Score=292.65 Aligned_cols=192 Identities=19% Similarity=0.266 Sum_probs=169.3
Q ss_pred CCccceeecCCcceEEEEE-EcCCcEEEEEEeeccccCHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEeeCCC
Q 004248 536 FSDANLIKNGHSGDLFRGI-LEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPN 614 (766)
Q Consensus 536 ~~~~~~ig~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey~~~ 614 (766)
|+.++++|+|+||.||||. .+.|..||||++.... ..+++..|+.+|++++.|+||+.||.|+. ...+|+|||||-.
T Consensus 35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~s-DLQEIIKEISIMQQC~S~yVVKYYGSYFK-~sDLWIVMEYCGA 112 (502)
T KOG0574|consen 35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDT-DLQEIIKEISIMQQCKSKYVVKYYGSYFK-HSDLWIVMEYCGA 112 (502)
T ss_pred HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccc-hHHHHHHHHHHHHHcCCchhhhhhhhhcc-CCceEeehhhcCC
Confidence 5667899999999999998 6789999999986543 45679999999999999999999998876 4679999999999
Q ss_pred CChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcCCC-
Q 004248 615 GDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGD- 693 (766)
Q Consensus 615 GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~~~- 693 (766)
|+..+.++-++. .+++.++..|....++||+|||.. +-||||||+.|||++.+|.+|++|||.|..+.+.
T Consensus 113 GSiSDI~R~R~K------~L~E~EIs~iL~~TLKGL~YLH~~---~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTM 183 (502)
T KOG0574|consen 113 GSISDIMRARRK------PLSEQEISAVLRDTLKGLQYLHDL---KKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTM 183 (502)
T ss_pred CcHHHHHHHhcC------CccHHHHHHHHHHHHhHHHHHHHH---HHHHhhcccccEEEcccchhhhhhccccchhhhhH
Confidence 999999986543 599999999999999999999986 7899999999999999999999999999766432
Q ss_pred --CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCC
Q 004248 694 --AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNL 747 (766)
Q Consensus 694 --~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~ 747 (766)
..+..||++|||||++..- | |++++||||+|++..||+.||+|+.
T Consensus 184 AKRNTVIGTPFWMAPEVI~EI--G-------Y~~~ADIWSLGITaIEMAEG~PPYs 230 (502)
T KOG0574|consen 184 AKRNTVIGTPFWMAPEVIEEI--G-------YDTKADIWSLGITAIEMAEGRPPYS 230 (502)
T ss_pred HhhCccccCcccccHHHHHHh--c-------cchhhhHhhhcchhhhhhcCCCCcc
Confidence 3457899999999998643 3 4789999999999999999999984
No 108
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=9.4e-34 Score=321.83 Aligned_cols=197 Identities=15% Similarity=0.153 Sum_probs=166.5
Q ss_pred CCccceeecCCcceEEEEEE-cC-CcEEEEEEeeccccC-HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEeeC
Q 004248 536 FSDANLIKNGHSGDLFRGIL-EG-GIPVVIKRIDLQSVK-TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYM 612 (766)
Q Consensus 536 ~~~~~~ig~G~~g~Vy~~~~-~~-g~~vavK~l~~~~~~-~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey~ 612 (766)
|...+.||+|+||.||+|.. .+ ++.||+|.+...... ...+.+|++++++++|||||++++++.. ++..|+||||+
T Consensus 69 y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~-~~~~~lv~E~~ 147 (478)
T PTZ00267 69 YVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKS-DDKLLLIMEYG 147 (478)
T ss_pred EEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEE-CCEEEEEEECC
Confidence 77889999999999999984 34 678999987544333 4567889999999999999999998766 57899999999
Q ss_pred CCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcCC
Q 004248 613 PNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGG 692 (766)
Q Consensus 613 ~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~~ 692 (766)
++|+|.+++++... ....+++.++..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 148 ~gg~L~~~l~~~~~---~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~ 221 (478)
T PTZ00267 148 SGGDLNKQIKQRLK---EHLPFQEYEVGLLFYQIVLALDEVHSR---KMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSD 221 (478)
T ss_pred CCCCHHHHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCcCHHhEEECCCCcEEEEeCcCceecCC
Confidence 99999998864321 123588999999999999999999997 999999999999999999999999999986532
Q ss_pred C-----CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 693 D-----AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 693 ~-----~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
. ....+||+.|+|||...... ++.++|||||||++|||+||+.||..
T Consensus 222 ~~~~~~~~~~~gt~~y~aPE~~~~~~---------~~~~~Dv~slG~~l~el~tg~~Pf~~ 273 (478)
T PTZ00267 222 SVSLDVASSFCGTPYYLAPELWERKR---------YSKKADMWSLGVILYELLTLHRPFKG 273 (478)
T ss_pred ccccccccccCCCccccCHhHhCCCC---------CCcHHhHHHHHHHHHHHHhCCCCCCC
Confidence 2 23346899999999876543 47899999999999999999999954
No 109
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-34 Score=299.52 Aligned_cols=196 Identities=23% Similarity=0.228 Sum_probs=171.8
Q ss_pred CCCCccceeecCCcceEEEEE-EcCCcEEEEEEeeccccC----HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGI-LEGGIPVVIKRIDLQSVK----TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLV 608 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~----~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV 608 (766)
+.|..-++||+|+||.||.++ ..+|+.+|.|++.+...+ ....+.|-.++.+++.+.||.+- |.+++.+.+++|
T Consensus 185 n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVsla-YAfeTkd~LClV 263 (591)
T KOG0986|consen 185 NTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLA-YAFETKDALCLV 263 (591)
T ss_pred cceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEe-eeecCCCceEEE
Confidence 458888999999999999998 578999999999765433 34578899999999999999976 455667789999
Q ss_pred EeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhh
Q 004248 609 YKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVC 688 (766)
Q Consensus 609 ~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~ 688 (766)
+..|.||||.-+|...+. ..+++.+.+.||.+|+.||++||+. +||.||+||+|||+|++|+++|+|.|+|.
T Consensus 264 LtlMNGGDLkfHiyn~g~-----~gF~e~ra~FYAAEi~cGLehlH~~---~iVYRDLKPeNILLDd~GhvRISDLGLAv 335 (591)
T KOG0986|consen 264 LTLMNGGDLKFHIYNHGN-----PGFDEQRARFYAAEIICGLEHLHRR---RIVYRDLKPENILLDDHGHVRISDLGLAV 335 (591)
T ss_pred EEeecCCceeEEeeccCC-----CCCchHHHHHHHHHHHhhHHHHHhc---ceeeccCChhheeeccCCCeEeeccceEE
Confidence 999999999999987653 3499999999999999999999998 99999999999999999999999999998
Q ss_pred hc--CCCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCC
Q 004248 689 AQ--GGDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNL 747 (766)
Q Consensus 689 ~~--~~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~ 747 (766)
.+ +.+....+||..|||||++..+.| +...|+||+||++|||+.|+.||-
T Consensus 336 ei~~g~~~~~rvGT~GYMAPEvl~ne~Y---------~~s~Dwf~lGCllYemi~G~sPFr 387 (591)
T KOG0986|consen 336 EIPEGKPIRGRVGTVGYMAPEVLQNEVY---------DFSPDWFSLGCLLYEMIAGHSPFR 387 (591)
T ss_pred ecCCCCccccccCcccccCHHHHcCCcc---------cCCccHHHHHhHHHHHHcccCchh
Confidence 76 334455589999999999988875 567799999999999999999993
No 110
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=1.7e-34 Score=285.93 Aligned_cols=201 Identities=15% Similarity=0.221 Sum_probs=170.0
Q ss_pred CCCCccceeecCCcceEEEEEEc---C--CcEEEEEEeeccccC---HHHHHHHHHHHhhcCCCCcccceeEEEecCCcE
Q 004248 534 GDFSDANLIKNGHSGDLFRGILE---G--GIPVVIKRIDLQSVK---TEAYLLELDFFSKVSHARLVPLLGHCMERENEK 605 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~~---~--g~~vavK~l~~~~~~---~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 605 (766)
..|+....||+|.||.||||+.. + .+.+|+|+++..+.. ....-||+.++++++|||||.+..++...+..+
T Consensus 24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v 103 (438)
T KOG0666|consen 24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKV 103 (438)
T ss_pred HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceE
Confidence 45888899999999999999732 2 347999999765332 456789999999999999999999887656789
Q ss_pred EEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCC----CcEEe
Q 004248 606 FLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDK----FEVRL 681 (766)
Q Consensus 606 ~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~----~~~kl 681 (766)
++++||++. ||...|+-++.. ....++-...+.|..||+.|+.|||++ =|+|||+||.|||+..+ |.+||
T Consensus 104 ~l~fdYAEh-DL~~II~fHr~~--~~~~lp~~mvKsilwQil~Gv~YLH~N---WvlHRDLKPaNIlvmgdgperG~VKI 177 (438)
T KOG0666|consen 104 WLLFDYAEH-DLWHIIKFHRAS--KAKQLPRSMVKSILWQILDGVHYLHSN---WVLHRDLKPANILVMGDGPERGRVKI 177 (438)
T ss_pred EEEehhhhh-hHHHHHHHhccc--hhccCCHHHHHHHHHHHHhhhHHHhhh---heeeccCCcceEEEeccCCccCeeEe
Confidence 999999996 999999755432 124588889999999999999999998 79999999999999877 89999
Q ss_pred ccchhhhhcCCC------CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 682 GSLSEVCAQGGD------AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 682 ~DFG~a~~~~~~------~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
+|||+||.+..+ ....+.|.||+|||.+.+..+ ||.+.||||.|||..||+|-++-|..
T Consensus 178 aDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~h--------YT~AiDvWAiGCIfaElLtl~PlF~g 242 (438)
T KOG0666|consen 178 ADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARH--------YTKAIDVWAIGCIFAELLTLEPLFKG 242 (438)
T ss_pred ecccHHHHhhccccccccCCceEEEEEecChHHhccccc--------ccchhhhHHHHHHHHHHHccCccccc
Confidence 999999987543 334678999999999887765 79999999999999999998877743
No 111
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-34 Score=284.05 Aligned_cols=204 Identities=15% Similarity=0.231 Sum_probs=171.8
Q ss_pred ccHHHHHHHhCCCCccceeecCCcceEEEEE-EcCCcEEEEEEeeccccC-HHHHHHHHHHHhhcC-CCCcccceeEEEe
Q 004248 524 FTYQQLLAATGDFSDANLIKNGHSGDLFRGI-LEGGIPVVIKRIDLQSVK-TEAYLLELDFFSKVS-HARLVPLLGHCME 600 (766)
Q Consensus 524 ~~~~~l~~~~~~~~~~~~ig~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~-~~~~~~E~~~l~~l~-H~niv~l~~~~~~ 600 (766)
-+++|+.+-| .+.+|+|+|+.|--++ ..+|..+|||++++.... +.+..||++++.+.+ |+||++|++++.+
T Consensus 73 g~F~d~YkLt-----~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEd 147 (463)
T KOG0607|consen 73 GKFEDMYKLT-----SELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFED 147 (463)
T ss_pred chHHHHHHhH-----HHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcc
Confidence 3578888877 4789999999999998 889999999999877555 678999999999995 9999999997654
Q ss_pred cCCcEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCC---
Q 004248 601 RENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKF--- 677 (766)
Q Consensus 601 ~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~--- 677 (766)
+...|||||-|.||.|.++|+++.. +++.+..++..+||.||.|||.+ +|.|||+||+|||-.+-.
T Consensus 148 -d~~FYLVfEKm~GGplLshI~~~~~-------F~E~EAs~vvkdia~aLdFlH~k---gIAHRDlKPENiLC~~pn~vs 216 (463)
T KOG0607|consen 148 -DTRFYLVFEKMRGGPLLSHIQKRKH-------FNEREASRVVKDIASALDFLHTK---GIAHRDLKPENILCESPNKVS 216 (463)
T ss_pred -cceEEEEEecccCchHHHHHHHhhh-------ccHHHHHHHHHHHHHHHHHHhhc---CcccccCCccceeecCCCCcC
Confidence 6789999999999999999987765 89999999999999999999998 999999999999997543
Q ss_pred cEEeccchhhhhc--C--------CCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCC
Q 004248 678 EVRLGSLSEVCAQ--G--------GDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNL 747 (766)
Q Consensus 678 ~~kl~DFG~a~~~--~--------~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~ 747 (766)
-+||+||.+...+ . ....+-+|+..|||||+......... .|+.++|.||+|||+|-|+.|.+||.
T Consensus 217 PvKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~----~YDKrCDlwSLGvIlYImLsGYpPFv 292 (463)
T KOG0607|consen 217 PVKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQAT----FYDKRCDLWSLGVILYIMLSGYPPFV 292 (463)
T ss_pred ceeeeccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccc----cccccccHHHHHHHHHHHHhCCCCcc
Confidence 4899999877543 1 12234578889999997654322111 27999999999999999999999994
No 112
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=7.7e-34 Score=322.22 Aligned_cols=203 Identities=17% Similarity=0.205 Sum_probs=166.7
Q ss_pred HHHHHhCCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccCHHHHHHHHHHHhhcCCC------CcccceeEEEe
Q 004248 528 QLLAATGDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHA------RLVPLLGHCME 600 (766)
Q Consensus 528 ~l~~~~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~H~------niv~l~~~~~~ 600 (766)
++...+++|+..++||+|+||+||+|.. .+++.||||+++......+++..|++++++++|. +++++++++..
T Consensus 123 ~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~ 202 (467)
T PTZ00284 123 DIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQN 202 (467)
T ss_pred ccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEc
Confidence 3444568899999999999999999984 5688999999965433345667788888877654 58888887765
Q ss_pred cCCcEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCC---
Q 004248 601 RENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKF--- 677 (766)
Q Consensus 601 ~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~--- 677 (766)
..+..++|||++ +++|.+++.+++ .+++..+..|+.||+.||+|||++ .+||||||||+|||++.++
T Consensus 203 ~~~~~~iv~~~~-g~~l~~~l~~~~-------~l~~~~~~~i~~qi~~aL~yLH~~--~gIiHrDlKP~NILl~~~~~~~ 272 (467)
T PTZ00284 203 ETGHMCIVMPKY-GPCLLDWIMKHG-------PFSHRHLAQIIFQTGVALDYFHTE--LHLMHTDLKPENILMETSDTVV 272 (467)
T ss_pred CCceEEEEEecc-CCCHHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHhc--CCeecCCCCHHHEEEecCCccc
Confidence 456789999998 679999887543 389999999999999999999973 2899999999999998765
Q ss_pred -------------cEEeccchhhhhcCCCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCC
Q 004248 678 -------------EVRLGSLSEVCAQGGDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNH 744 (766)
Q Consensus 678 -------------~~kl~DFG~a~~~~~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~ 744 (766)
.+||+|||.+..........++|+.|+|||.+.+.. ++.++|||||||++|||+||+.
T Consensus 273 ~~~~~~~~~~~~~~vkl~DfG~~~~~~~~~~~~~gt~~Y~APE~~~~~~---------~~~~~DiwSlGvil~elltG~~ 343 (467)
T PTZ00284 273 DPVTNRALPPDPCRVRICDLGGCCDERHSRTAIVSTRHYRSPEVVLGLG---------WMYSTDMWSMGCIIYELYTGKL 343 (467)
T ss_pred ccccccccCCCCceEEECCCCccccCccccccccCCccccCcHHhhcCC---------CCcHHHHHHHHHHHHHHHhCCC
Confidence 499999998876544555667899999999986554 4679999999999999999999
Q ss_pred CCCCC
Q 004248 745 LNLSS 749 (766)
Q Consensus 745 p~~~~ 749 (766)
||...
T Consensus 344 pf~~~ 348 (467)
T PTZ00284 344 LYDTH 348 (467)
T ss_pred CCCCC
Confidence 99543
No 113
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.3e-34 Score=281.79 Aligned_cols=199 Identities=23% Similarity=0.308 Sum_probs=171.9
Q ss_pred CCCCccceeecCCcceEEEEE-EcCCcEEEEEEeeccccC---------HHHHHHHHHHHhhc-CCCCcccceeEEEecC
Q 004248 534 GDFSDANLIKNGHSGDLFRGI-LEGGIPVVIKRIDLQSVK---------TEAYLLELDFFSKV-SHARLVPLLGHCMERE 602 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~---------~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~ 602 (766)
+.|...+++|.|..++|.++. .++|+..|+|++...... .++-.+|+.||+++ .||+|+++.++|.. +
T Consensus 17 ~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes-~ 95 (411)
T KOG0599|consen 17 AKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYES-D 95 (411)
T ss_pred hhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccC-c
Confidence 457778899999999999987 678999999999643221 35677899999998 59999999996654 6
Q ss_pred CcEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEec
Q 004248 603 NEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLG 682 (766)
Q Consensus 603 ~~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~ 682 (766)
...++|+|.|+.|.|+++|...- .+++....+|+.|+..|++|||.. .|||||+||+|||+|++.++||+
T Consensus 96 sF~FlVFdl~prGELFDyLts~V-------tlSEK~tR~iMrqlfegVeylHa~---~IVHRDLKpENILlddn~~i~is 165 (411)
T KOG0599|consen 96 AFVFLVFDLMPRGELFDYLTSKV-------TLSEKETRRIMRQLFEGVEYLHAR---NIVHRDLKPENILLDDNMNIKIS 165 (411)
T ss_pred chhhhhhhhcccchHHHHhhhhe-------eecHHHHHHHHHHHHHHHHHHHHh---hhhhcccChhheeeccccceEEe
Confidence 78999999999999999997653 489999999999999999999998 99999999999999999999999
Q ss_pred cchhhhhc--CCCCccceeeecccCCCCCCCCce-eeeeeeeecccccceecchHHHHHHhcCCCCCC
Q 004248 683 SLSEVCAQ--GGDAHQSRITRLLRLPQSSEQGSS-GMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNL 747 (766)
Q Consensus 683 DFG~a~~~--~~~~~~~~~t~~y~aPe~~~~~~~-g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~ 747 (766)
|||+|..+ +......+||+.|.|||++.+..+ +.++ |+..+|.||.|||||.++.|.+||.
T Consensus 166 DFGFa~~l~~GekLrelCGTPgYLAPEtikC~m~e~~pG----Ys~EVD~Wa~GVImyTLLaGcpPFw 229 (411)
T KOG0599|consen 166 DFGFACQLEPGEKLRELCGTPGYLAPETIKCSMYENHPG----YSKEVDEWACGVIMYTLLAGCPPFW 229 (411)
T ss_pred ccceeeccCCchhHHHhcCCCcccChhheeeecccCCCC----ccchhhHHHHHHHHHHHHcCCCchh
Confidence 99999877 445677899999999998876433 2234 6889999999999999999999984
No 114
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=2e-33 Score=300.84 Aligned_cols=202 Identities=19% Similarity=0.328 Sum_probs=163.3
Q ss_pred CCCCccceeecCCcceEEEEEEc-----------------CCcEEEEEEeeccccC--HHHHHHHHHHHhhcCCCCcccc
Q 004248 534 GDFSDANLIKNGHSGDLFRGILE-----------------GGIPVVIKRIDLQSVK--TEAYLLELDFFSKVSHARLVPL 594 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~~-----------------~g~~vavK~l~~~~~~--~~~~~~E~~~l~~l~H~niv~l 594 (766)
++|...++||+|+||.||+|..+ ++..||+|.+...... ..+|.+|++++.+++|||||++
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~ 84 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL 84 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence 46788899999999999999743 2347999998754322 4579999999999999999999
Q ss_pred eeEEEecCCcEEEEEeeCCCCChhhhhhccCCC------------CCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeE
Q 004248 595 LGHCMERENEKFLVYKYMPNGDLSSSLYRKTNT------------EDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFV 662 (766)
Q Consensus 595 ~~~~~~~~~~~~lV~Ey~~~GsL~~~l~~~~~~------------~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ii 662 (766)
++++.+ .+..++||||+++|+|.+++...... ......++|.++.+++.|++.||+|||+. +|+
T Consensus 85 ~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~iv 160 (304)
T cd05096 85 LGVCVD-EDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSL---NFV 160 (304)
T ss_pred EEEEec-CCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC---Ccc
Confidence 998876 56799999999999999998653211 01123589999999999999999999997 999
Q ss_pred ecCCCCCCeeeCCCCcEEeccchhhhhcCCCC-----ccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHH
Q 004248 663 HRDVQASSILLDDKFEVRLGSLSEVCAQGGDA-----HQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLF 737 (766)
Q Consensus 663 HrDlKp~NILl~~~~~~kl~DFG~a~~~~~~~-----~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ 737 (766)
||||||+|||+++++.+||+|||+++...... ....++..|+|||....+. ++.++|||||||++|
T Consensus 161 H~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~Dv~slG~~l~ 231 (304)
T cd05096 161 HRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGK---------FTTASDVWAFGVTLW 231 (304)
T ss_pred ccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCC---------CCchhhhHHHHHHHH
Confidence 99999999999999999999999997652211 1223466799999875543 478999999999999
Q ss_pred HHhc--CCCCCCC
Q 004248 738 SAIF--NNHLNLS 748 (766)
Q Consensus 738 ellt--G~~p~~~ 748 (766)
||++ |..||..
T Consensus 232 el~~~~~~~p~~~ 244 (304)
T cd05096 232 EILMLCKEQPYGE 244 (304)
T ss_pred HHHHccCCCCCCc
Confidence 9987 5667743
No 115
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=1.3e-33 Score=317.15 Aligned_cols=199 Identities=16% Similarity=0.219 Sum_probs=161.2
Q ss_pred hCCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccCHHHHHHHHHHHhhcCCCCcccceeEEEec-----C--Cc
Q 004248 533 TGDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMER-----E--NE 604 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-----~--~~ 604 (766)
.++|...++||+|+||.||+|.. .+++.||||++.... ....+|+.+|++++|||||++++++... + ..
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~---~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~ 141 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP---QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIF 141 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc---chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceE
Confidence 45799999999999999999995 578999999985432 2345799999999999999999876431 1 13
Q ss_pred EEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCC-cEEecc
Q 004248 605 KFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKF-EVRLGS 683 (766)
Q Consensus 605 ~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~-~~kl~D 683 (766)
.++||||+++ +|.+++..... ....+++.....++.|++.||+|||+. +|+||||||+|||++.++ .+||+|
T Consensus 142 l~lvmE~~~~-~l~~~~~~~~~---~~~~l~~~~~~~~~~qi~~gL~yLH~~---~IiHrDLKp~NILl~~~~~~vkL~D 214 (440)
T PTZ00036 142 LNVVMEFIPQ-TVHKYMKHYAR---NNHALPLFLVKLYSYQLCRALAYIHSK---FICHRDLKPQNLLIDPNTHTLKLCD 214 (440)
T ss_pred EEEEEecCCc-cHHHHHHHHhh---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCcCHHHEEEcCCCCceeeec
Confidence 6799999985 78777753211 113589999999999999999999998 999999999999999664 799999
Q ss_pred chhhhhcC--CCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 684 LSEVCAQG--GDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 684 FG~a~~~~--~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
||+|+... .......+|+.|+|||.+.+... ++.++|||||||++|||+||++||...
T Consensus 215 FGla~~~~~~~~~~~~~~t~~y~aPE~~~~~~~--------~~~~~DiwSlGvil~elltG~~pf~~~ 274 (440)
T PTZ00036 215 FGSAKNLLAGQRSVSYICSRFYRAPELMLGATN--------YTTHIDLWSLGCIIAEMILGYPIFSGQ 274 (440)
T ss_pred cccchhccCCCCcccCCCCcCccCHHHhcCCCC--------CCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 99998653 23344577999999998754321 578999999999999999999999543
No 116
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=9.9e-34 Score=311.90 Aligned_cols=203 Identities=21% Similarity=0.302 Sum_probs=164.7
Q ss_pred CCCCccceeecCCcceEEEEEE------cCCcEEEEEEeeccccC--HHHHHHHHHHHhhc-CCCCcccceeEEEecCCc
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL------EGGIPVVIKRIDLQSVK--TEAYLLELDFFSKV-SHARLVPLLGHCMERENE 604 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~------~~g~~vavK~l~~~~~~--~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~ 604 (766)
++|+..+.||+|+||.||+|+. .++..||||+++..... .+.+.+|+++++++ +|||||+++++|.. .+.
T Consensus 38 ~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~-~~~ 116 (374)
T cd05106 38 DNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTH-GGP 116 (374)
T ss_pred HHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecC-CCC
Confidence 4688899999999999999973 23458999999754322 45788999999999 89999999998876 568
Q ss_pred EEEEEeeCCCCChhhhhhccCCC---------------------------------------------------------
Q 004248 605 KFLVYKYMPNGDLSSSLYRKTNT--------------------------------------------------------- 627 (766)
Q Consensus 605 ~~lV~Ey~~~GsL~~~l~~~~~~--------------------------------------------------------- 627 (766)
.++|||||++|+|.++++.....
T Consensus 117 ~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (374)
T cd05106 117 VLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSD 196 (374)
T ss_pred eEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccccc
Confidence 99999999999999998643210
Q ss_pred ------CCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcCCCCc-----c
Q 004248 628 ------EDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAH-----Q 696 (766)
Q Consensus 628 ------~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~~~~~-----~ 696 (766)
......++|.+..+++.||+.||+|||+. +|+||||||+|||+++++.+||+|||+++....... .
T Consensus 197 ~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~ 273 (374)
T cd05106 197 SKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASK---NCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGN 273 (374)
T ss_pred ccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccC
Confidence 00113589999999999999999999997 999999999999999999999999999976532211 1
Q ss_pred ceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCCC
Q 004248 697 SRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLSS 749 (766)
Q Consensus 697 ~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~~ 749 (766)
..++..|+|||...... ++.++|||||||++|||++ |+.||...
T Consensus 274 ~~~~~~y~aPE~~~~~~---------~~~~~DvwSlGvil~ellt~G~~Pf~~~ 318 (374)
T cd05106 274 ARLPVKWMAPESIFDCV---------YTVQSDVWSYGILLWEIFSLGKSPYPGI 318 (374)
T ss_pred CCCccceeCHHHhcCCC---------CCccccHHHHHHHHHHHHhCCCCCCccc
Confidence 12345699999876543 5789999999999999997 99998543
No 117
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=3e-33 Score=291.56 Aligned_cols=197 Identities=20% Similarity=0.308 Sum_probs=167.5
Q ss_pred CCCCccceeecCCcceEEEEEEcCCcEEEEEEeeccccCHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEeeCC
Q 004248 534 GDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMP 613 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey~~ 613 (766)
++|+..+.||+|+||.||+|...++..+|+|.+.......++|.+|++++++++||||+++++++.. ++..++||||++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~iv~e~~~ 82 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGAMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQ-QKPLYIVTEFME 82 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCCccHHHHHHHHHHHHHCCCCCceeEEEEEcc-CCCEEEEEEcCC
Confidence 3577789999999999999998888899999987655556789999999999999999999997765 568999999999
Q ss_pred CCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcCCC
Q 004248 614 NGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGD 693 (766)
Q Consensus 614 ~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~~~ 693 (766)
+|+|.++++.... .++|..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||.++.....
T Consensus 83 ~~~L~~~~~~~~~------~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~ 153 (256)
T cd05114 83 NGCLLNYLRQRQG------KLSKDMLLSMCQDVCEGMEYLERN---SFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDD 153 (256)
T ss_pred CCcHHHHHHhCcc------CCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcceEEEcCCCeEEECCCCCccccCCC
Confidence 9999999975432 389999999999999999999987 9999999999999999999999999998764221
Q ss_pred C----ccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCCC
Q 004248 694 A----HQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLSS 749 (766)
Q Consensus 694 ~----~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~~ 749 (766)
. ....++..|+|||...... ++.++|||||||++|||+| |+.||...
T Consensus 154 ~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~Di~s~G~~l~el~~~g~~p~~~~ 205 (256)
T cd05114 154 EYTSSSGAKFPVKWSPPEVFNFSK---------YSSKSDVWSFGVLMWEVFTEGKMPFEKK 205 (256)
T ss_pred ceeccCCCCCchhhCChhhcccCc---------cchhhhhHHHHHHHHHHHcCCCCCCCCC
Confidence 1 1122345799999876443 4679999999999999999 89998543
No 118
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.2e-33 Score=304.96 Aligned_cols=202 Identities=18% Similarity=0.205 Sum_probs=178.5
Q ss_pred HhCCCCccceeecCCcceEEEEE-EcCCcEEEEEEeeccccC---HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEE
Q 004248 532 ATGDFSDANLIKNGHSGDLFRGI-LEGGIPVVIKRIDLQSVK---TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFL 607 (766)
Q Consensus 532 ~~~~~~~~~~ig~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~---~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~l 607 (766)
.++.|.....||+|.|++|..|+ ..+|..||||.+++.... .+.+.+|+++|..++|||||+++.+.. .+..+|+
T Consensus 54 ~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~-t~~~lyl 132 (596)
T KOG0586|consen 54 SVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIE-TEATLYL 132 (596)
T ss_pred cccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeee-ecceeEE
Confidence 45678889999999999999998 567999999999876654 456999999999999999999999654 4678999
Q ss_pred EEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhh
Q 004248 608 VYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEV 687 (766)
Q Consensus 608 V~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a 687 (766)
||||+.+|++++++.+++. +.+.....++.|+.+|++|||++ .|||||||++||||+.++++||+|||++
T Consensus 133 V~eya~~ge~~~yl~~~gr-------~~e~~ar~~F~q~vsaveYcH~k---~ivHrdLk~eNilL~~~mnikIaDfgfS 202 (596)
T KOG0586|consen 133 VMEYASGGELFDYLVKHGR-------MKEKEARAKFRQIVSAVEYCHSK---NIVHRDLKAENILLDENMNIKIADFGFS 202 (596)
T ss_pred EEEeccCchhHHHHHhccc-------chhhhhhhhhHHHHHHHHHHhhc---ceeccccchhhcccccccceeeeccccc
Confidence 9999999999999987765 55677888999999999999998 8999999999999999999999999999
Q ss_pred hhc--CCCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCCccc
Q 004248 688 CAQ--GGDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSSRFG 752 (766)
Q Consensus 688 ~~~--~~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~~~~ 752 (766)
..+ +....+.+|++.|.|||...+..| .++++|+||+||++|-|+.|..||+.....
T Consensus 203 ~~~~~~~~lqt~cgsppyAaPEl~~g~~y--------~gpe~D~Wslgvvly~LV~GsLPFDG~~lk 261 (596)
T KOG0586|consen 203 TFFDYGLMLQTFCGSPPYAAPELFNGKKY--------DGPEVDIWSLGVVLYALVEGSLPFDGQNLK 261 (596)
T ss_pred eeecccccccccCCCCCccChHhhcCccc--------CCcceehhhhhhhheeeeecccccCCcccc
Confidence 876 344677899999999999987765 468999999999999999999999765544
No 119
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=2.6e-33 Score=305.35 Aligned_cols=198 Identities=17% Similarity=0.211 Sum_probs=168.2
Q ss_pred HHhCCCCccceeecCCcceEEEEEE-cCCcEEEEEEeecccc---CHHHHHHHHHHHhhcCCCCcccceeEEEec-----
Q 004248 531 AATGDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV---KTEAYLLELDFFSKVSHARLVPLLGHCMER----- 601 (766)
Q Consensus 531 ~~~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~E~~~l~~l~H~niv~l~~~~~~~----- 601 (766)
+..++|...+.||+|+||.||+|.. .+++.||||++..... ..+++.+|++++++++||||+++++++...
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07878 12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIEN 91 (343)
T ss_pred hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccc
Confidence 3457799999999999999999984 6788999999865332 245688999999999999999999876432
Q ss_pred CCcEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEe
Q 004248 602 ENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRL 681 (766)
Q Consensus 602 ~~~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl 681 (766)
....|+++||+ +++|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||
T Consensus 92 ~~~~~~~~~~~-~~~l~~~~~~~--------~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrdikp~Nil~~~~~~~kl 159 (343)
T cd07878 92 FNEVYLVTNLM-GADLNNIVKCQ--------KLSDEHVQFLIYQLLRGLKYIHSA---GIIHRDLKPSNVAVNEDCELRI 159 (343)
T ss_pred cCcEEEEeecC-CCCHHHHHhcC--------CCCHHHHHHHHHHHHHHHHHHHHC---CeecccCChhhEEECCCCCEEE
Confidence 13579999998 67998887532 389999999999999999999998 9999999999999999999999
Q ss_pred ccchhhhhcCCCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 682 GSLSEVCAQGGDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 682 ~DFG~a~~~~~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
+|||+++..........+|+.|+|||.+..... ++.++||||+||++|||++|+.||..
T Consensus 160 ~Dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~--------~~~~~DiwslG~il~el~~g~~pf~~ 218 (343)
T cd07878 160 LDFGLARQADDEMTGYVATRWYRAPEIMLNWMH--------YNQTVDIWSVGCIMAELLKGKALFPG 218 (343)
T ss_pred cCCccceecCCCcCCccccccccCchHhcCCcc--------CCchhhhHhHHHHHHHHHHCCCCCCC
Confidence 999999877666666778999999998754321 57899999999999999999999954
No 120
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=2.4e-33 Score=302.36 Aligned_cols=190 Identities=17% Similarity=0.194 Sum_probs=161.5
Q ss_pred ceeecCCcceEEEEEE-cCCcEEEEEEeecccc----CHHHHHHHHHHHhhc-CCCCcccceeEEEecCCcEEEEEeeCC
Q 004248 540 NLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV----KTEAYLLELDFFSKV-SHARLVPLLGHCMERENEKFLVYKYMP 613 (766)
Q Consensus 540 ~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~----~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~~lV~Ey~~ 613 (766)
++||+|+||+||+|.. .+++.||||.++.... ..+.+.+|.++++.+ +||||+++++++.. .+..|+||||++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~-~~~~~lv~e~~~ 79 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQT-KDRLFFVMEYVN 79 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEc-CCEEEEEEcCCC
Confidence 4799999999999985 4688999999975432 245678899999888 69999999997665 568999999999
Q ss_pred CCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhc---
Q 004248 614 NGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQ--- 690 (766)
Q Consensus 614 ~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~--- 690 (766)
+|+|.+++.+.. .+++.++..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++..
T Consensus 80 ~~~L~~~~~~~~-------~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 149 (318)
T cd05570 80 GGDLMFHIQRSG-------RFDEPRARFYAAEIVLGLQFLHER---GIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILG 149 (318)
T ss_pred CCCHHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHhC---CeEccCCCHHHeEECCCCcEEecccCCCeecCcC
Confidence 999999887543 389999999999999999999997 9999999999999999999999999998653
Q ss_pred CCCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 691 GGDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 691 ~~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
........+|..|+|||.+.... ++.++|||||||++|||+||+.||...
T Consensus 150 ~~~~~~~~g~~~y~aPE~~~~~~---------~~~~~DiwslGvil~~l~~G~~pf~~~ 199 (318)
T cd05570 150 GVTTSTFCGTPDYIAPEILSYQP---------YGPAVDWWALGVLLYEMLAGQSPFEGD 199 (318)
T ss_pred CCcccceecCccccCHHHhcCCC---------CCcchhhhhHHHHHHHHhhCCCCCCCC
Confidence 12233456889999999876544 478999999999999999999999543
No 121
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=2.7e-33 Score=293.89 Aligned_cols=197 Identities=19% Similarity=0.325 Sum_probs=163.9
Q ss_pred CCCCccceeecCCcceEEEEEEc----CCcEEEEEEeeccccC--HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGILE----GGIPVVIKRIDLQSVK--TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFL 607 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~~----~g~~vavK~l~~~~~~--~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~l 607 (766)
++|+..+.||+|+||.||+|... .+..||+|.++..... .+.|.+|+.++++++||||+++++++.. .+..++
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~l 83 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITR-GNTMMI 83 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEec-CCCcEE
Confidence 45788899999999999999842 3679999998754322 4579999999999999999999998765 568999
Q ss_pred EEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhh
Q 004248 608 VYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEV 687 (766)
Q Consensus 608 V~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a 687 (766)
||||+++|+|.+++.... ..++|.++..++.|++.||+|||+. +++||||||+||+++.++.+|++|||.+
T Consensus 84 v~e~~~~~~L~~~l~~~~------~~l~~~~~~~~~~~i~~al~~lH~~---~iiH~dikp~nili~~~~~~~l~dfg~~ 154 (266)
T cd05064 84 VTEYMSNGALDSFLRKHE------GQLVAGQLMGMLPGLASGMKYLSEM---GYVHKGLAAHKVLVNSDLVCKISGFRRL 154 (266)
T ss_pred EEEeCCCCcHHHHHHhCC------CCCCHHHHHHHHHHHHHHHHHHHHC---CEeeccccHhhEEEcCCCcEEECCCccc
Confidence 999999999999997543 2489999999999999999999987 9999999999999999999999999987
Q ss_pred hhcCCC----CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCCC
Q 004248 688 CAQGGD----AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLSS 749 (766)
Q Consensus 688 ~~~~~~----~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~~ 749 (766)
...... .....++..|+|||...... ++.++|||||||++||+++ |+.||...
T Consensus 155 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~Di~slG~~l~ell~~g~~p~~~~ 212 (266)
T cd05064 155 QEDKSEAIYTTMSGKSPVLWAAPEAIQYHH---------FSSASDVWSFGIVMWEVMSYGERPYWDM 212 (266)
T ss_pred ccccccchhcccCCCCceeecCHHHHhhCC---------ccchhHHHHHHHHHHHHhcCCCCCcCcC
Confidence 653211 11223456899999875543 4789999999999999775 99999543
No 122
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=2.5e-33 Score=300.92 Aligned_cols=198 Identities=19% Similarity=0.254 Sum_probs=166.0
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC--HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEe
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK--TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYK 610 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~--~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~E 610 (766)
++|...+.||+|+||.||+|+. .+++.||+|+++..... ...+.+|++++++++||||+++++++.. ++..++|||
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e 84 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHT-DKSLTLVFE 84 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEee-CCeEEEEEe
Confidence 4688899999999999999985 46889999998754332 4568899999999999999999998765 568999999
Q ss_pred eCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhc
Q 004248 611 YMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQ 690 (766)
Q Consensus 611 y~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~ 690 (766)
|+++ +|.+++...+ ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 85 ~~~~-~l~~~~~~~~------~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~ 154 (309)
T cd07872 85 YLDK-DLKQYMDDCG------NIMSMHNVKIFLYQILRGLAYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAK 154 (309)
T ss_pred CCCC-CHHHHHHhcC------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECccccceec
Confidence 9985 8988886543 2478999999999999999999997 9999999999999999999999999998764
Q ss_pred CCC---CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCCc
Q 004248 691 GGD---AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSSR 750 (766)
Q Consensus 691 ~~~---~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~~ 750 (766)
... .....++..|+|||....... ++.++||||+||++|||+||+.||....
T Consensus 155 ~~~~~~~~~~~~~~~y~aPE~~~~~~~--------~~~~~DiwslG~il~el~tg~~pf~~~~ 209 (309)
T cd07872 155 SVPTKTYSNEVVTLWYRPPDVLLGSSE--------YSTQIDMWGVGCIFFEMASGRPLFPGST 209 (309)
T ss_pred CCCccccccccccccccCCHHHhCCCC--------CCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 322 223457889999998754321 4789999999999999999999995443
No 123
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=2.4e-33 Score=309.07 Aligned_cols=196 Identities=17% Similarity=0.213 Sum_probs=164.2
Q ss_pred CCCccceeecCCcceEEEEEE-cCCcEEEEEEeecccc---CHHHHHHHHHHHhhcCCCCcccceeEEEecC----CcEE
Q 004248 535 DFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV---KTEAYLLELDFFSKVSHARLVPLLGHCMERE----NEKF 606 (766)
Q Consensus 535 ~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~----~~~~ 606 (766)
+|+..+.||+|+||.||+|.. .+|+.||||++..... ..+++.+|+++++.++||||+++++++.... ...|
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 478889999999999999995 5799999999864322 2457889999999999999999999776532 1689
Q ss_pred EEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchh
Q 004248 607 LVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSE 686 (766)
Q Consensus 607 lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~ 686 (766)
+||||+. ++|.+.+.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 81 lv~e~~~-~~l~~~~~~~~-------~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~ 149 (372)
T cd07853 81 VVTELMQ-SDLHKIIVSPQ-------PLSSDHVKVFLYQILRGLKYLHSA---GILHRDIKPGNLLVNSNCVLKICDFGL 149 (372)
T ss_pred EEeeccc-cCHHHHHhcCC-------CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHHEEECCCCCEEeccccc
Confidence 9999997 58888886433 389999999999999999999998 999999999999999999999999999
Q ss_pred hhhcCCC----CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 687 VCAQGGD----AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 687 a~~~~~~----~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
++..... .....+++.|+|||.+.+... ++.++||||+||++|||++|+.||...
T Consensus 150 a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~--------~~~~~DiwslG~il~el~~g~~pf~~~ 208 (372)
T cd07853 150 ARVEEPDESKHMTQEVVTQYYRAPEILMGSRH--------YTSAVDIWSVGCIFAELLGRRILFQAQ 208 (372)
T ss_pred eeecccCccccCCCCCcCCCcCCHHHHcCCCC--------CCcHHHHHhHHHHHHHHHcCCCCCCCC
Confidence 9765321 223457889999998754322 478999999999999999999999544
No 124
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=1.4e-33 Score=305.85 Aligned_cols=190 Identities=16% Similarity=0.115 Sum_probs=158.0
Q ss_pred eecCCcceEEEEEE-cCCcEEEEEEeeccccC----HHHHHHHHHHHhhc---CCCCcccceeEEEecCCcEEEEEeeCC
Q 004248 542 IKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK----TEAYLLELDFFSKV---SHARLVPLLGHCMERENEKFLVYKYMP 613 (766)
Q Consensus 542 ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~----~~~~~~E~~~l~~l---~H~niv~l~~~~~~~~~~~~lV~Ey~~ 613 (766)
||+|+||+||+|+. .+++.||||++...... ...+.+|..++.+. +||||+++++++.. .+..|+||||++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~-~~~~~lv~e~~~ 79 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQT-DSDLYLVTDYMS 79 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEec-CCeEEEEEcCCC
Confidence 69999999999984 56899999999654322 23456677777766 69999999987655 568999999999
Q ss_pred CCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcC--
Q 004248 614 NGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQG-- 691 (766)
Q Consensus 614 ~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~-- 691 (766)
+|+|.+++.+.. .+++..+..++.||++||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 80 ~g~L~~~l~~~~-------~~~~~~~~~~~~qil~al~~LH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~ 149 (330)
T cd05586 80 GGELFWHLQKEG-------RFSEDRAKFYIAELVLALEHLHKY---DIVYRDLKPENILLDATGHIALCDFGLSKANLTD 149 (330)
T ss_pred CChHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEecCCcCcCCCCC
Confidence 999999987543 389999999999999999999997 99999999999999999999999999987542
Q ss_pred -CCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCCc
Q 004248 692 -GDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSSR 750 (766)
Q Consensus 692 -~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~~ 750 (766)
.......||..|+|||.+..... ++.++||||+||++|||+||+.||...+
T Consensus 150 ~~~~~~~~gt~~y~aPE~~~~~~~--------~~~~~DvwslGvil~elltG~~Pf~~~~ 201 (330)
T cd05586 150 NKTTNTFCGTTEYLAPEVLLDEKG--------YTKHVDFWSLGVLVFEMCCGWSPFYAED 201 (330)
T ss_pred CCCccCccCCccccCHHHHcCCCC--------CCCccceeccccEEEEeccCCCCCCCCC
Confidence 22334568999999998754321 4789999999999999999999996543
No 125
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=2.3e-33 Score=327.36 Aligned_cols=202 Identities=17% Similarity=0.168 Sum_probs=168.2
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC----HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK----TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLV 608 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~----~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV 608 (766)
++|+..++||+|+||.||+|+. .+|+.||||++...... .++|.+|++++++++|||||++++++.+ ++..|+|
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d-~~~lyLV 80 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSD-GDPVYYT 80 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEee-CCEEEEE
Confidence 5788999999999999999995 56899999999653221 4579999999999999999999998765 5689999
Q ss_pred EeeCCCCChhhhhhccCCC----CCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccc
Q 004248 609 YKYMPNGDLSSSLYRKTNT----EDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684 (766)
Q Consensus 609 ~Ey~~~GsL~~~l~~~~~~----~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DF 684 (766)
|||+++|+|.+++...... ......+++.++..++.||++||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 81 MEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~---GIIHRDLKPeNILLd~dg~vKLiDF 157 (932)
T PRK13184 81 MPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSK---GVLHRDLKPDNILLGLFGEVVILDW 157 (932)
T ss_pred EEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHC---CccccCCchheEEEcCCCCEEEEec
Confidence 9999999999998642110 11123477888999999999999999997 9999999999999999999999999
Q ss_pred hhhhhcCCC---------------------CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCC
Q 004248 685 SEVCAQGGD---------------------AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNN 743 (766)
Q Consensus 685 G~a~~~~~~---------------------~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~ 743 (766)
|+++..... .....||+.|+|||...+.. ++.++|||||||++|||+||+
T Consensus 158 GLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~---------~S~kSDIWSLGVILyELLTG~ 228 (932)
T PRK13184 158 GAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVP---------ASESTDIYALGVILYQMLTLS 228 (932)
T ss_pred CcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCC---------CCcHhHHHHHHHHHHHHHHCC
Confidence 999754100 01235899999999875543 478999999999999999999
Q ss_pred CCCCC
Q 004248 744 HLNLS 748 (766)
Q Consensus 744 ~p~~~ 748 (766)
.||..
T Consensus 229 ~PF~~ 233 (932)
T PRK13184 229 FPYRR 233 (932)
T ss_pred CCCCC
Confidence 99954
No 126
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=4e-33 Score=300.34 Aligned_cols=195 Identities=19% Similarity=0.312 Sum_probs=163.3
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCc----EEEEEEeecccc--CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGI----PVVIKRIDLQSV--KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKF 606 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~----~vavK~l~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~ 606 (766)
.+|+..+.||+|+||.||+|++ .++. .||||.++.... ..++|.+|+.+++.++||||++++|+|.. +..+
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~--~~~~ 84 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT--STVQ 84 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcC--CCce
Confidence 4688999999999999999984 3443 489999864332 25679999999999999999999998875 3578
Q ss_pred EEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchh
Q 004248 607 LVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSE 686 (766)
Q Consensus 607 lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~ 686 (766)
+|+||+++|+|.+++.+... .+++..+..++.||+.||+|||+. +|+||||||+|||+++++.+||+|||+
T Consensus 85 ~v~e~~~~g~l~~~l~~~~~------~~~~~~~~~~~~qi~~~L~~LH~~---~iiH~dlkp~Nill~~~~~~kl~DfG~ 155 (316)
T cd05108 85 LITQLMPFGCLLDYVREHKD------NIGSQYLLNWCVQIAKGMNYLEER---RLVHRDLAARNVLVKTPQHVKITDFGL 155 (316)
T ss_pred eeeecCCCCCHHHHHHhccc------cCCHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEecCCCcEEEccccc
Confidence 99999999999999976432 488999999999999999999997 999999999999999999999999999
Q ss_pred hhhcCCCCc-----cceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCC
Q 004248 687 VCAQGGDAH-----QSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLS 748 (766)
Q Consensus 687 a~~~~~~~~-----~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~ 748 (766)
++....... ...++..|+|||...... ++.++|||||||++|||+| |+.||..
T Consensus 156 a~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~---------~~~~~Di~slGv~l~el~t~g~~p~~~ 214 (316)
T cd05108 156 AKLLGADEKEYHAEGGKVPIKWMALESILHRI---------YTHQSDVWSYGVTVWELMTFGSKPYDG 214 (316)
T ss_pred cccccCCCcceeccCCccceeecChHHhccCC---------CCchhhhHHHHHHHHHHHcCCCCCCCC
Confidence 987632211 122356799999875443 5789999999999999998 9999854
No 127
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=2.8e-33 Score=308.57 Aligned_cols=204 Identities=22% Similarity=0.286 Sum_probs=165.4
Q ss_pred hCCCCccceeecCCcceEEEEEE------cCCcEEEEEEeecccc--CHHHHHHHHHHHhhc-CCCCcccceeEEEecCC
Q 004248 533 TGDFSDANLIKNGHSGDLFRGIL------EGGIPVVIKRIDLQSV--KTEAYLLELDFFSKV-SHARLVPLLGHCMEREN 603 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~~------~~g~~vavK~l~~~~~--~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~ 603 (766)
.++|+..+.||+|+||.||+|+. .++..||||+++.... ..+.+.+|+++++.+ +|||||+++++|.. .+
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~-~~ 112 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTV-GG 112 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeecc-CC
Confidence 34688889999999999999973 3467899999865432 245789999999999 89999999998866 56
Q ss_pred cEEEEEeeCCCCChhhhhhccCCCC-------------------------------------------------------
Q 004248 604 EKFLVYKYMPNGDLSSSLYRKTNTE------------------------------------------------------- 628 (766)
Q Consensus 604 ~~~lV~Ey~~~GsL~~~l~~~~~~~------------------------------------------------------- 628 (766)
..++|||||++|+|.+++++.....
T Consensus 113 ~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (375)
T cd05104 113 PTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSG 192 (375)
T ss_pred cceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccc
Confidence 8999999999999999997532100
Q ss_pred -------------CcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcCCCCc
Q 004248 629 -------------DDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAH 695 (766)
Q Consensus 629 -------------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~~~~~ 695 (766)
.....++|.++..++.||++||+|||+. +|+||||||+|||+++++.+||+|||+++.......
T Consensus 193 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 269 (375)
T cd05104 193 SYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIRNDSN 269 (375)
T ss_pred eecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCchhhEEEECCCcEEEecCccceeccCccc
Confidence 0112589999999999999999999997 999999999999999999999999999976532211
Q ss_pred -----cceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCCC
Q 004248 696 -----QSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLSS 749 (766)
Q Consensus 696 -----~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~~ 749 (766)
...++..|+|||...... ++.++|||||||++|||+| |+.||...
T Consensus 270 ~~~~~~~~~~~~y~aPE~~~~~~---------~~~~sDi~slG~~l~ellt~g~~p~~~~ 320 (375)
T cd05104 270 YVVKGNARLPVKWMAPESIFNCV---------YTFESDVWSYGILLWEIFSLGSSPYPGM 320 (375)
T ss_pred ccccCCCCCCcceeChhHhcCCC---------CCCCCCHHHHHHHHHHHHhcCCCCCCCC
Confidence 122345699999876543 4789999999999999998 88888543
No 128
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=1.7e-33 Score=319.99 Aligned_cols=203 Identities=14% Similarity=0.171 Sum_probs=169.9
Q ss_pred HhCCCCccceeecCCcceEEEEE-EcCCcEEEEEEeeccccC---HHHHHHHHHHHhhcCCCCcccceeEEEecCC----
Q 004248 532 ATGDFSDANLIKNGHSGDLFRGI-LEGGIPVVIKRIDLQSVK---TEAYLLELDFFSKVSHARLVPLLGHCMEREN---- 603 (766)
Q Consensus 532 ~~~~~~~~~~ig~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~---~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~---- 603 (766)
..++|...+.||+|+||.||+|+ ..+|+.||||+++..... ...+.+|+.++..++|+||+++++.+...+.
T Consensus 30 ~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~ 109 (496)
T PTZ00283 30 QAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPE 109 (496)
T ss_pred cCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcc
Confidence 34689999999999999999998 567999999999765432 4568899999999999999998876543211
Q ss_pred ---cEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEE
Q 004248 604 ---EKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVR 680 (766)
Q Consensus 604 ---~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~k 680 (766)
.+++||||+++|+|.+++..+.. ....+++.....++.|++.||+|||+. +|+||||||+|||+++++.+|
T Consensus 110 ~~~~i~lV~Ey~~~gsL~~~l~~~~~---~~~~l~e~~~~~i~~qll~aL~~lH~~---~IiHrDLKP~NILl~~~~~vk 183 (496)
T PTZ00283 110 NVLMIALVLDYANAGDLRQEIKSRAK---TNRTFREHEAGLLFIQVLLAVHHVHSK---HMIHRDIKSANILLCSNGLVK 183 (496)
T ss_pred cceEEEEEEeCCCCCcHHHHHHHhhc---cCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEeCCCCEE
Confidence 36899999999999999975432 123589999999999999999999997 999999999999999999999
Q ss_pred eccchhhhhcCC-----CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 681 LGSLSEVCAQGG-----DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 681 l~DFG~a~~~~~-----~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
|+|||+++.... ......||+.|+|||.+.... ++.++|||||||++|||+||+.||...
T Consensus 184 L~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~---------~s~k~DVwSlGvilyeLltG~~Pf~~~ 248 (496)
T PTZ00283 184 LGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKP---------YSKKADMFSLGVLLYELLTLKRPFDGE 248 (496)
T ss_pred EEecccCeeccccccccccccccCCcceeCHHHhCCCC---------CCcHHHHHHHHHHHHHHHHCCCCCCCC
Confidence 999999976532 123456899999999886544 478999999999999999999999643
No 129
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.5e-33 Score=288.64 Aligned_cols=197 Identities=19% Similarity=0.201 Sum_probs=166.6
Q ss_pred CCCccceeecCCcceEEEEEEc-CCcEEEEEEeeccccC----HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEE
Q 004248 535 DFSDANLIKNGHSGDLFRGILE-GGIPVVIKRIDLQSVK----TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVY 609 (766)
Q Consensus 535 ~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~----~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~ 609 (766)
+|+..+.||.|.-|+||.+.+. ++..+|+|++++.... ..+...|-+||+.++||.+..||+.+. .++..++||
T Consensus 78 ~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fe-t~~~~cl~m 156 (459)
T KOG0610|consen 78 HFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFE-TDKYSCLVM 156 (459)
T ss_pred HHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheee-ccceeEEEE
Confidence 3556789999999999999965 4689999999876543 346777999999999999999999665 467899999
Q ss_pred eeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhh
Q 004248 610 KYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCA 689 (766)
Q Consensus 610 Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~ 689 (766)
|||+||||..+.+++.+ ..+++..+..||.+|+.||+|||-. +||.|||||+||||-++|++-|+||-++..
T Consensus 157 eyCpGGdL~~LrqkQp~-----~~fse~~aRFYaAEvl~ALEYLHml---GivYRDLKPENILvredGHIMLsDFDLS~~ 228 (459)
T KOG0610|consen 157 EYCPGGDLHSLRQKQPG-----KRFSESAARFYAAEVLLALEYLHML---GIVYRDLKPENILVREDGHIMLSDFDLSLR 228 (459)
T ss_pred ecCCCccHHHHHhhCCC-----CccchhhHHHHHHHHHHHHHHHHhh---ceeeccCCcceeEEecCCcEEeeecccccc
Confidence 99999999999887654 4599999999999999999999986 999999999999999999999999987632
Q ss_pred cC------------------------------------C-----------------------CCccceeeecccCCCCCC
Q 004248 690 QG------------------------------------G-----------------------DAHQSRITRLLRLPQSSE 710 (766)
Q Consensus 690 ~~------------------------------------~-----------------------~~~~~~~t~~y~aPe~~~ 710 (766)
.. . .....+||..|.|||++.
T Consensus 229 ~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~ 308 (459)
T KOG0610|consen 229 CPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIR 308 (459)
T ss_pred CCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeee
Confidence 10 0 001246899999999998
Q ss_pred CCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 711 QGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 711 ~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
+..+| .++|+|+|||.+|||+.|+-||...
T Consensus 309 G~GHg---------sAVDWWtfGIflYEmLyG~TPFKG~ 338 (459)
T KOG0610|consen 309 GEGHG---------SAVDWWTFGIFLYEMLYGTTPFKGS 338 (459)
T ss_pred cCCCC---------chhhHHHHHHHHHHHHhCCCCcCCC
Confidence 87764 5789999999999999999999543
No 130
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=4.7e-33 Score=290.90 Aligned_cols=197 Identities=16% Similarity=0.328 Sum_probs=168.3
Q ss_pred CCCCccceeecCCcceEEEEEEcCCcEEEEEEeeccccCHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEeeCC
Q 004248 534 GDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMP 613 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey~~ 613 (766)
++|+..++||+|+||.||+|...+++.||+|.+.......+.+.+|+.++++++||||+++++++.. .+..++||||++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~~ 84 (261)
T cd05072 6 ESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTK-EEPIYIITEYMA 84 (261)
T ss_pred HHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCchhHHHHHHHHHHHHhCCCCCeeeEEEEEcC-CCCcEEEEecCC
Confidence 4688899999999999999998888899999987655556789999999999999999999987655 567899999999
Q ss_pred CCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcCCC
Q 004248 614 NGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGD 693 (766)
Q Consensus 614 ~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~~~ 693 (766)
+|+|.+++++... ..+++.++..++.|++.||+|||+. +++||||||+||++++++.+||+|||+++.....
T Consensus 85 ~~~L~~~l~~~~~-----~~~~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~ 156 (261)
T cd05072 85 KGSLLDFLKSDEG-----GKVLLPKLIDFSAQIAEGMAYIERK---NYIHRDLRAANVLVSESLMCKIADFGLARVIEDN 156 (261)
T ss_pred CCcHHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEecCCCcEEECCCccceecCCC
Confidence 9999999975432 3489999999999999999999987 9999999999999999999999999999865332
Q ss_pred C----ccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCC
Q 004248 694 A----HQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLS 748 (766)
Q Consensus 694 ~----~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~ 748 (766)
. ....++..|+|||...... ++.++|||||||++|||+| |+.||..
T Consensus 157 ~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~Di~slG~~l~~l~t~g~~p~~~ 207 (261)
T cd05072 157 EYTAREGAKFPIKWTAPEAINFGS---------FTIKSDVWSFGILLYEIVTYGKIPYPG 207 (261)
T ss_pred ceeccCCCccceecCCHHHhccCC---------CChhhhhhhhHHHHHHHHccCCCCCCC
Confidence 1 1223456799999875443 4679999999999999999 9999853
No 131
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=4e-33 Score=294.51 Aligned_cols=189 Identities=20% Similarity=0.240 Sum_probs=160.0
Q ss_pred eecCCcceEEEEEE-cCCcEEEEEEeeccccC----HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEeeCCCCC
Q 004248 542 IKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK----TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGD 616 (766)
Q Consensus 542 ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~----~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey~~~Gs 616 (766)
||+|+||.||++.. .+|+.||+|++...... .+.+..|++++++++||||+++++++.. +...|+||||+++|+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~-~~~~~lv~e~~~g~~ 79 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFES-KTHLCLVMSLMNGGD 79 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEec-CCeEEEEEecCCCCC
Confidence 69999999999984 56999999999653322 3456779999999999999999986654 568999999999999
Q ss_pred hhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcCCC--C
Q 004248 617 LSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGD--A 694 (766)
Q Consensus 617 L~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~~~--~ 694 (766)
|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||++...... .
T Consensus 80 L~~~~~~~~~-----~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~~ 151 (277)
T cd05607 80 LKYHIYNVGE-----RGLEMERVIHYSAQITCGILHLHSM---DIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKTI 151 (277)
T ss_pred HHHHHHhccc-----cCCCHHHHHHHHHHHHHHHHHHHHC---CEEEccCChHhEEEcCCCCEEEeeceeeeecCCCcee
Confidence 9998865432 3489999999999999999999997 9999999999999999999999999998765322 2
Q ss_pred ccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 695 HQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 695 ~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
....++..|+|||...... ++.++||||+||++|||++|+.||..
T Consensus 152 ~~~~~~~~y~aPE~~~~~~---------~~~~~DvwslGv~l~el~~g~~p~~~ 196 (277)
T cd05607 152 TQRAGTNGYMAPEILKEEP---------YSYPVDWFAMGCSIYEMVAGRTPFKD 196 (277)
T ss_pred eccCCCCCccCHHHHccCC---------CCCchhHHHHHHHHHHHHhCCCCCCC
Confidence 2345788999999876544 46899999999999999999999954
No 132
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=3e-33 Score=294.09 Aligned_cols=206 Identities=18% Similarity=0.239 Sum_probs=171.6
Q ss_pred HHhCCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccCHHHHHHHHHHHhhc-CCCCcccceeEEEec-----CC
Q 004248 531 AATGDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVKTEAYLLELDFFSKV-SHARLVPLLGHCMER-----EN 603 (766)
Q Consensus 531 ~~~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~-----~~ 603 (766)
.+++.|+..+.||+|+||.||+|.. .+++.||+|++........++.+|+.++.++ +||||+++++++... +.
T Consensus 3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~ 82 (272)
T cd06637 3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDD 82 (272)
T ss_pred ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCc
Confidence 3567788889999999999999985 5688999999976655567899999999999 799999999987642 23
Q ss_pred cEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEecc
Q 004248 604 EKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGS 683 (766)
Q Consensus 604 ~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~D 683 (766)
..|+||||+++|+|.+++..... ..++|..+..++.|++.|++|||+. +|+||||||+||++++++.+||+|
T Consensus 83 ~~~iv~e~~~~~~L~~~l~~~~~-----~~l~~~~~~~~~~qi~~~l~~LH~~---~ivh~dl~~~nili~~~~~~~l~D 154 (272)
T cd06637 83 QLWLVMEFCGAGSVTDLIKNTKG-----NTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVD 154 (272)
T ss_pred EEEEEEEcCCCCcHHHHHHhccC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHEEECCCCCEEEcc
Confidence 58999999999999999975432 3489999999999999999999997 999999999999999999999999
Q ss_pred chhhhhcCC---CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 684 LSEVCAQGG---DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 684 FG~a~~~~~---~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
||+++.... ......++..|+|||.+......... ++.++|||||||++|||++|+.||..
T Consensus 155 fg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~----~~~~~Dv~slGv~l~el~~g~~p~~~ 218 (272)
T cd06637 155 FGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDAT----YDFKSDLWSLGITAIEMAEGAPPLCD 218 (272)
T ss_pred CCCceecccccccCCcccccccccCHhHhccccCcCCC----CCchhhHHHHHHHHHHHHhCCCCccc
Confidence 999976532 22334678899999987543211111 57899999999999999999999954
No 133
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=7.1e-34 Score=301.87 Aligned_cols=194 Identities=23% Similarity=0.377 Sum_probs=165.7
Q ss_pred CCccceeecCCcceEEEEEEcCCcEEEEEEeeccccC--HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEeeCC
Q 004248 536 FSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVK--TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMP 613 (766)
Q Consensus 536 ~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~--~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey~~ 613 (766)
....++||+|.||+|..+....+..||||.++..... +.+|.+|+++|.+++|||||+++|+|.. ++.+++|+|||+
T Consensus 540 L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~-DePicmI~EYmE 618 (807)
T KOG1094|consen 540 LRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQ-DDPLCMITEYME 618 (807)
T ss_pred eehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeec-CCchHHHHHHHh
Confidence 4567899999999999999999999999999876554 6799999999999999999999999987 568999999999
Q ss_pred CCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcC-C
Q 004248 614 NGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQG-G 692 (766)
Q Consensus 614 ~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~-~ 692 (766)
+|||.+++.++.. ...+-....+||.|||.||+||.+- ++||||+.++|||+|.++++||+|||++|.+. +
T Consensus 619 nGDLnqFl~ahea-----pt~~t~~~vsi~tqiasgmaYLes~---nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg 690 (807)
T KOG1094|consen 619 NGDLNQFLSAHEL-----PTAETAPGVSICTQIASGMAYLESL---NFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSG 690 (807)
T ss_pred cCcHHHHHHhccC-----cccccchhHHHHHHHHHHHHHHHhh---chhhccccccceeecCcccEEecCcccccccccC
Confidence 9999999987643 1134556678999999999999986 99999999999999999999999999999652 2
Q ss_pred CCcc----ceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc--CCCCCC
Q 004248 693 DAHQ----SRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF--NNHLNL 747 (766)
Q Consensus 693 ~~~~----~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt--G~~p~~ 747 (766)
+... .+-...|||+|.+..+. +|+++|||+|||++||+++ ..+||.
T Consensus 691 ~yy~vqgr~vlpiRwmawEsillgk---------FttaSDvWafgvTlwE~~~~C~e~Py~ 742 (807)
T KOG1094|consen 691 DYYRVQGRAVLPIRWMAWESILLGK---------FTTASDVWAFGVTLWEVFMLCREQPYS 742 (807)
T ss_pred CceeeecceeeeeeehhHHHHHhcc---------ccchhhhhhhHHHHHHHHHHHhhCchh
Confidence 2221 22345799999887665 6899999999999999876 677884
No 134
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.8e-34 Score=306.07 Aligned_cols=191 Identities=20% Similarity=0.271 Sum_probs=165.7
Q ss_pred eeecCCcceEEEEE-EcCCcEEEEEEeeccccC-HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEeeCCCCChh
Q 004248 541 LIKNGHSGDLFRGI-LEGGIPVVIKRIDLQSVK-TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLS 618 (766)
Q Consensus 541 ~ig~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~-~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey~~~GsL~ 618 (766)
++|+|.||+||.|+ +.+...+|||.+...... .+-...|+.+-++++|.|||+.+|.|.+ ++..-+.||-+|||+|.
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~se-nGf~kIFMEqVPGGSLS 660 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSE-NGFFKIFMEQVPGGSLS 660 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCC-CCeEEEEeecCCCCcHH
Confidence 69999999999999 566789999999765543 4457789999999999999999997655 56788999999999999
Q ss_pred hhhhccCCCCCcCCCC--CHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeC-CCCcEEeccchhhhhcC---C
Q 004248 619 SSLYRKTNTEDDLQSL--DWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLD-DKFEVRLGSLSEVCAQG---G 692 (766)
Q Consensus 619 ~~l~~~~~~~~~~~~l--~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~-~~~~~kl~DFG~a~~~~---~ 692 (766)
++|+.+=+ ++ .+.+.-.+.+||.+||.|||+. .|||||||-.|||++ -.|.+||+|||.++... .
T Consensus 661 sLLrskWG------PlKDNEstm~fYtkQILeGLkYLHen---~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP 731 (1226)
T KOG4279|consen 661 SLLRSKWG------PLKDNESTMNFYTKQILEGLKYLHEN---KIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINP 731 (1226)
T ss_pred HHHHhccC------CCccchhHHHHHHHHHHHHhhhhhhc---ceeeccccCCcEEEeeccceEEecccccchhhccCCc
Confidence 99986433 34 6777888999999999999998 999999999999997 57999999999998762 3
Q ss_pred CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 693 DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 693 ~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
-+.+..||..|||||++..+..|| +.++|||||||++.||+|||+||..
T Consensus 732 ~TETFTGTLQYMAPEvIDqG~RGY-------G~aADIWS~GCT~vEMATGrPPF~E 780 (1226)
T KOG4279|consen 732 CTETFTGTLQYMAPEVIDQGPRGY-------GKAADIWSFGCTMVEMATGRPPFVE 780 (1226)
T ss_pred cccccccchhhhChHhhccCCcCC-------CchhhhhhccceeEeeccCCCCeee
Confidence 345678999999999999888875 7799999999999999999999953
No 135
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=6.1e-33 Score=304.41 Aligned_cols=196 Identities=17% Similarity=0.200 Sum_probs=164.5
Q ss_pred HhCCCCccceeecCCcceEEEEEE-cCCcEEEEEEeecccc---CHHHHHHHHHHHhhcCCCCcccceeEEEecC-----
Q 004248 532 ATGDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV---KTEAYLLELDFFSKVSHARLVPLLGHCMERE----- 602 (766)
Q Consensus 532 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~----- 602 (766)
..++|+..+.||+|+||.||+|.. .+|+.||||++..... ..+++.+|+.++++++||||+++++++....
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 98 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF 98 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence 347899999999999999999984 5689999999964322 2457889999999999999999999775422
Q ss_pred CcEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEec
Q 004248 603 NEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLG 682 (766)
Q Consensus 603 ~~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~ 682 (766)
...|+||||+++ +|.+.++. .+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+
T Consensus 99 ~~~~lv~e~~~~-~l~~~~~~---------~~~~~~~~~~~~qi~~~L~~LH~~---~ivHrDlkp~NIl~~~~~~~kl~ 165 (359)
T cd07876 99 QDVYLVMELMDA-NLCQVIHM---------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKIL 165 (359)
T ss_pred ceeEEEEeCCCc-CHHHHHhc---------cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEe
Confidence 247999999975 67766642 278889999999999999999998 99999999999999999999999
Q ss_pred cchhhhhcCC--CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 683 SLSEVCAQGG--DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 683 DFG~a~~~~~--~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
|||+++.... ......+|+.|+|||.+.+.. ++.++||||+||++|||+||+.||...
T Consensus 166 Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~---------~~~~~DiwSlG~il~el~tg~~pf~~~ 225 (359)
T cd07876 166 DFGLARTACTNFMMTPYVVTRYYRAPEVILGMG---------YKENVDIWSVGCIMGELVKGSVIFQGT 225 (359)
T ss_pred cCCCccccccCccCCCCcccCCCCCchhccCCC---------CCcchhhHHHHHHHHHHHhCCCCCCCC
Confidence 9999976532 233456789999999886544 478999999999999999999999543
No 136
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.4e-34 Score=282.51 Aligned_cols=196 Identities=17% Similarity=0.197 Sum_probs=171.3
Q ss_pred CCCCccceeecCCcceEEEEE-EcCCcEEEEEEeeccccC----HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGI-LEGGIPVVIKRIDLQSVK----TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLV 608 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~----~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV 608 (766)
++|+..+++|+|.||+|-.++ ..+|+.+|||++++.-.- ...-+.|-++|+..+||.+..+.. .++..+.+++|
T Consensus 168 ~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKY-sFQt~drlCFV 246 (516)
T KOG0690|consen 168 EDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKY-SFQTQDRLCFV 246 (516)
T ss_pred chhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhh-hhccCceEEEE
Confidence 468889999999999999998 678999999999765432 224567999999999999988874 45556789999
Q ss_pred EeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhh
Q 004248 609 YKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVC 688 (766)
Q Consensus 609 ~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~ 688 (766)
|||+.||.|.-+|.+.+. +++.....+-.+|+.||.|||++ +||.||+|.+|.|+|.+|++||+|||+++
T Consensus 247 MeyanGGeLf~HLsrer~-------FsE~RtRFYGaEIvsAL~YLHs~---~ivYRDlKLENLlLDkDGHIKitDFGLCK 316 (516)
T KOG0690|consen 247 MEYANGGELFFHLSRERV-------FSEDRTRFYGAEIVSALGYLHSR---NIVYRDLKLENLLLDKDGHIKITDFGLCK 316 (516)
T ss_pred EEEccCceEeeehhhhhc-------ccchhhhhhhHHHHHHhhhhhhC---CeeeeechhhhheeccCCceEeeecccch
Confidence 999999999999976543 88888889999999999999998 99999999999999999999999999998
Q ss_pred hc---CCCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 689 AQ---GGDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 689 ~~---~~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
.- +....+.+||+.|.|||+++...|| ..+|+|.+|||+|||+.|+.||...
T Consensus 317 E~I~~g~t~kTFCGTPEYLAPEVleDnDYg---------raVDWWG~GVVMYEMmCGRLPFyn~ 371 (516)
T KOG0690|consen 317 EEIKYGDTTKTFCGTPEYLAPEVLEDNDYG---------RAVDWWGVGVVMYEMMCGRLPFYNK 371 (516)
T ss_pred hcccccceeccccCChhhcCchhhcccccc---------ceeehhhhhHHHHHHHhccCccccc
Confidence 63 5667889999999999999877765 5789999999999999999999543
No 137
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=9e-33 Score=289.79 Aligned_cols=199 Identities=18% Similarity=0.244 Sum_probs=168.4
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC-HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEee
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK-TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKY 611 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~-~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey 611 (766)
++|+..+.||+|+||.||+|+. .+++.||+|++...... .+.+.+|+.++++++||||+++++++.. ++..|+||||
T Consensus 9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~-~~~~~iv~e~ 87 (267)
T cd06646 9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLS-REKLWICMEY 87 (267)
T ss_pred hhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEe-CCEEEEEEeC
Confidence 4688899999999999999994 67899999998754433 4568899999999999999999998765 5689999999
Q ss_pred CCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcC
Q 004248 612 MPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQG 691 (766)
Q Consensus 612 ~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~ 691 (766)
+++|+|.++++... .+++.++..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++...
T Consensus 88 ~~~~~L~~~~~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~ 157 (267)
T cd06646 88 CGGGSLQDIYHVTG-------PLSELQIAYVCRETLQGLAYLHSK---GKMHRDIKGANILLTDNGDVKLADFGVAAKIT 157 (267)
T ss_pred CCCCcHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEECcCccceeec
Confidence 99999999987543 389999999999999999999997 99999999999999999999999999997653
Q ss_pred CC---CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 692 GD---AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 692 ~~---~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
.. .....++..|+|||.+.....+. ++.++|||||||++|||++|+.||...
T Consensus 158 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~------~~~~~Dvws~G~il~el~~g~~p~~~~ 212 (267)
T cd06646 158 ATIAKRKSFIGTPYWMAPEVAAVEKNGG------YNQLCDIWAVGITAIELAELQPPMFDL 212 (267)
T ss_pred ccccccCccccCccccCHhHcccccCCC------CcchhhHHHHHHHHHHHHhCCCCcccc
Confidence 22 22345778899999874322221 478999999999999999999998543
No 138
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=1.2e-32 Score=287.79 Aligned_cols=199 Identities=17% Similarity=0.304 Sum_probs=169.1
Q ss_pred hCCCCccceeecCCcceEEEEEEcCCcEEEEEEeeccccCHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEeeC
Q 004248 533 TGDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYM 612 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey~ 612 (766)
.++|+..+.||+|+||.||+|...+++.||+|.++......++|.+|++++++++||||+++++++.. .+..++||||+
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~ 83 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTMDPKDFLAEAQIMKKLRHPKLIQLYAVCTL-EEPIYIVTELM 83 (261)
T ss_pred hhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCcccHHHHHHHHHHHHHCCCCCccceeEEEec-CCCeeeeeecc
Confidence 35688889999999999999998778899999997665557789999999999999999999997765 56799999999
Q ss_pred CCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcCC
Q 004248 613 PNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGG 692 (766)
Q Consensus 613 ~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~~ 692 (766)
++|+|.+++..... ..++|.++..++.|++.|++|||+. +|+||||||+||++++++.+||+|||+++....
T Consensus 84 ~~~~L~~~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~ 155 (261)
T cd05068 84 KYGSLLEYLQGGAG-----RALKLPQLIDMAAQVASGMAYLEAQ---NYIHRDLAARNVLVGENNICKVADFGLARVIKE 155 (261)
T ss_pred cCCcHHHHHhccCC-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCcceEEEcCCCCEEECCcceEEEccC
Confidence 99999999975432 3489999999999999999999987 999999999999999999999999999986642
Q ss_pred CC-ccce---eeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCCC
Q 004248 693 DA-HQSR---ITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLSS 749 (766)
Q Consensus 693 ~~-~~~~---~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~~ 749 (766)
.. .... .+..|+|||...... ++.++|||||||++|||+| |+.||...
T Consensus 156 ~~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~Di~slG~~l~el~t~g~~p~~~~ 208 (261)
T cd05068 156 DIYEAREGAKFPIKWTAPEAALYNR---------FSIKSDVWSFGILLTEIVTYGRMPYPGM 208 (261)
T ss_pred CcccccCCCcCceeccCccccccCC---------CCchhhHHHHHHHHHHHHhcCCCCCCCC
Confidence 21 1111 234699999875443 4789999999999999999 99998543
No 139
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-33 Score=294.38 Aligned_cols=200 Identities=18% Similarity=0.171 Sum_probs=174.3
Q ss_pred CCCCccceeecCCcceEEEEE-EcCCcEEEEEEeeccccC---HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGI-LEGGIPVVIKRIDLQSVK---TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVY 609 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~---~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~ 609 (766)
+-|+..+.||+|.|++|-.|+ .=+|.+||||++++.+.. ...+.+|++.|+-++|||||+||.+.. ....+|||+
T Consensus 18 GLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViD-TQTKlyLiL 96 (864)
T KOG4717|consen 18 GLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVID-TQTKLYLIL 96 (864)
T ss_pred eeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhc-ccceEEEEE
Confidence 446777899999999999998 568999999999876654 457889999999999999999999554 456799999
Q ss_pred eeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCC-CCcEEeccchhhh
Q 004248 610 KYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDD-KFEVRLGSLSEVC 688 (766)
Q Consensus 610 Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~-~~~~kl~DFG~a~ 688 (766)
|.-++|||+++|.++.. .+.+.-..+|+.||+.|+.|+|.- .+|||||||+||..-+ -|-+|+.|||++.
T Consensus 97 ELGD~GDl~DyImKHe~------Gl~E~La~kYF~QI~~AI~YCHqL---HVVHRDLKPENVVFFEKlGlVKLTDFGFSN 167 (864)
T KOG4717|consen 97 ELGDGGDLFDYIMKHEE------GLNEDLAKKYFAQIVHAISYCHQL---HVVHRDLKPENVVFFEKLGLVKLTDFGFSN 167 (864)
T ss_pred EecCCchHHHHHHhhhc------cccHHHHHHHHHHHHHHHHHHhhh---hhhcccCCcceeEEeeecCceEeeeccccc
Confidence 99999999999987653 388999999999999999999986 8999999999998865 5889999999986
Q ss_pred hc--CCCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCCcc
Q 004248 689 AQ--GGDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSSRF 751 (766)
Q Consensus 689 ~~--~~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~~~ 751 (766)
.+ +....+++|+..|.|||++.+..|.. +++||||+|||||-++.|+.||...+.
T Consensus 168 kf~PG~kL~TsCGSLAYSAPEILLGDsYDA--------PAVDiWSLGVILyMLVCGq~PFqeAND 224 (864)
T KOG4717|consen 168 KFQPGKKLTTSCGSLAYSAPEILLGDSYDA--------PAVDIWSLGVILYMLVCGQPPFQEAND 224 (864)
T ss_pred cCCCcchhhcccchhhccCchhhhcCccCC--------cchhhhHHHHHHHHHHhCCCccccccc
Confidence 55 45677889999999999998887753 789999999999999999999965443
No 140
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=5.6e-33 Score=300.85 Aligned_cols=197 Identities=18% Similarity=0.176 Sum_probs=171.9
Q ss_pred hCCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC----HHHHHHHHHHHhhcC-CCCcccceeEEEecCCcEE
Q 004248 533 TGDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK----TEAYLLELDFFSKVS-HARLVPLLGHCMERENEKF 606 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~----~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~~ 606 (766)
...|+..+.||+|.||.||+++. .+|+.+|+|.+.+.... .+.+.+|+++|+++. |||||.+++.+.. ...++
T Consensus 34 ~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~-~~~~~ 112 (382)
T KOG0032|consen 34 KEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFED-PDSVY 112 (382)
T ss_pred cccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEc-CCeEE
Confidence 34577789999999999999995 56999999999765543 368999999999998 9999999997765 56899
Q ss_pred EEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCC----CcEEec
Q 004248 607 LVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDK----FEVRLG 682 (766)
Q Consensus 607 lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~----~~~kl~ 682 (766)
+|||+|.||+|.+.|.+. .+++.+...++.|++.|+.|||+. +|+|||+||+|+|+... +.+|++
T Consensus 113 lvmEL~~GGeLfd~i~~~--------~~sE~da~~~~~~il~av~~lH~~---gvvHrDlKpEN~L~~~~~~~~~~ik~~ 181 (382)
T KOG0032|consen 113 LVMELCEGGELFDRIVKK--------HYSERDAAGIIRQILEAVKYLHSL---GVVHRDLKPENLLLASKDEGSGRIKLI 181 (382)
T ss_pred EEEEecCCchHHHHHHHc--------cCCHHHHHHHHHHHHHHHHHHHhC---CceeccCCHHHeeeccccCCCCcEEEe
Confidence 999999999999999754 189999999999999999999997 99999999999999643 579999
Q ss_pred cchhhhhcCC--CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCCc
Q 004248 683 SLSEVCAQGG--DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSSR 750 (766)
Q Consensus 683 DFG~a~~~~~--~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~~ 750 (766)
|||++..... ..+..+||+.|+|||+..... ++.++||||+||++|.|++|.+||...+
T Consensus 182 DFGla~~~~~~~~~~~~~Gtp~y~APEvl~~~~---------y~~~~DiWS~Gvi~yiLL~G~~PF~~~~ 242 (382)
T KOG0032|consen 182 DFGLAKFIKPGERLHTIVGTPEYVAPEVLGGRP---------YGDEVDVWSIGVILYILLSGVPPFWGET 242 (382)
T ss_pred eCCCceEccCCceEeeecCCccccCchhhcCCC---------CCcccchhHHHHHHHHHhhCCCCCcCCC
Confidence 9999988754 466789999999999987554 4679999999999999999999996443
No 141
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=9.1e-34 Score=306.12 Aligned_cols=190 Identities=16% Similarity=0.290 Sum_probs=165.0
Q ss_pred cceeecCCcceEEEEEE-cCCcEEEEEEeecccc---C--HHHHHHHHHHHhhcCCCCcccceeEEEecC-CcEEEEEee
Q 004248 539 ANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV---K--TEAYLLELDFFSKVSHARLVPLLGHCMERE-NEKFLVYKY 611 (766)
Q Consensus 539 ~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~---~--~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~~~lV~Ey 611 (766)
..+||+|+|-+||||.. .+|..||.-.++.... . .++|..|+.+|+.|+|||||+++.++.+.. ....+|+|.
T Consensus 45 ~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL 124 (632)
T KOG0584|consen 45 DEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITEL 124 (632)
T ss_pred hhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeec
Confidence 46899999999999995 5688999766643322 2 478999999999999999999999877643 357899999
Q ss_pred CCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCC-CCcEEeccchhhhhc
Q 004248 612 MPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDD-KFEVRLGSLSEVCAQ 690 (766)
Q Consensus 612 ~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~-~~~~kl~DFG~a~~~ 690 (766)
|..|+|..|+.+.+. ++....+.+++||.+||.|||++ .|+|||||||.+||+|+. -|.+||+|.|+|...
T Consensus 125 ~TSGtLr~Y~kk~~~-------vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~ 196 (632)
T KOG0584|consen 125 FTSGTLREYRKKHRR-------VNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLL 196 (632)
T ss_pred ccCCcHHHHHHHhcc-------CCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHHHHh
Confidence 999999999987765 78889999999999999999996 789999999999999985 589999999999988
Q ss_pred CCC-CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCC
Q 004248 691 GGD-AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLN 746 (766)
Q Consensus 691 ~~~-~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~ 746 (766)
... ....+||+-+||||.++ .. |++.+||||||+.++||+|+..|+
T Consensus 197 r~s~aksvIGTPEFMAPEmYE-E~---------YnE~VDVYaFGMCmLEMvT~eYPY 243 (632)
T KOG0584|consen 197 RKSHAKSVIGTPEFMAPEMYE-EN---------YNELVDVYAFGMCMLEMVTSEYPY 243 (632)
T ss_pred hccccceeccCccccChHHHh-hh---------cchhhhhhhhhHHHHHHHhccCCh
Confidence 554 44468999999999986 22 589999999999999999999998
No 142
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=1.1e-32 Score=292.38 Aligned_cols=196 Identities=21% Similarity=0.196 Sum_probs=166.2
Q ss_pred CCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC----HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEe
Q 004248 536 FSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK----TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYK 610 (766)
Q Consensus 536 ~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~----~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~E 610 (766)
|+..+.||+|+||+||+|.. .+++.||+|.+...... .+.+.+|++++++++|+||+++++++.. ++..++|||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~-~~~~~lv~e 80 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYET-KDALCLVLT 80 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEec-CCEEEEEEE
Confidence 66778999999999999985 57899999999754322 3457889999999999999999987655 568999999
Q ss_pred eCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhc
Q 004248 611 YMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQ 690 (766)
Q Consensus 611 y~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~ 690 (766)
|+++|+|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||++...
T Consensus 81 ~~~~~~L~~~~~~~~~-----~~~~~~~~~~~~~ql~~~l~~lH~~---~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~ 152 (285)
T cd05632 81 IMNGGDLKFHIYNMGN-----PGFEEERALFYAAEILCGLEDLHRE---NTVYRDLKPENILLDDYGHIRISDLGLAVKI 152 (285)
T ss_pred eccCccHHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEECCCCCEEEecCCcceec
Confidence 9999999998865432 2489999999999999999999987 9999999999999999999999999998654
Q ss_pred CC--CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 691 GG--DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 691 ~~--~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
.. ......++..|+|||.+.... ++.++|||||||++|||+||+.||...
T Consensus 153 ~~~~~~~~~~g~~~~~aPE~~~~~~---------~~~~~Di~slG~~l~~l~~g~~P~~~~ 204 (285)
T cd05632 153 PEGESIRGRVGTVGYMAPEVLNNQR---------YTLSPDYWGLGCLIYEMIEGQSPFRGR 204 (285)
T ss_pred CCCCcccCCCCCcCccChHHhcCCC---------CCcccchHHHHHHHHHHHhCCCCCCCC
Confidence 32 223346789999999876543 467999999999999999999999643
No 143
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=8.7e-35 Score=279.20 Aligned_cols=195 Identities=18% Similarity=0.212 Sum_probs=167.8
Q ss_pred CCCCccceeecCCcceEEEEE-EcCCcEEEEEEeecccc---CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGI-LEGGIPVVIKRIDLQSV---KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVY 609 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~-~~~g~~vavK~l~~~~~---~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~ 609 (766)
+.|+..++||+|.|+.||++. .++|+.+|+|.++.... ..++..+|++|-+.++|||||++.+-+.+ ++..|+|+
T Consensus 11 d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~-~~~~ylvF 89 (355)
T KOG0033|consen 11 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE-ESFHYLVF 89 (355)
T ss_pred hhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcc-cceeEEEE
Confidence 457777899999999999997 67899999999865443 35788999999999999999999996654 67899999
Q ss_pred eeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCC---CcEEeccchh
Q 004248 610 KYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDK---FEVRLGSLSE 686 (766)
Q Consensus 610 Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~---~~~kl~DFG~ 686 (766)
|+|+||+|..-|-.+. .+++...-.++.||+.||.|+|.+ +|||||+||+|+|+-+. --+|++|||+
T Consensus 90 e~m~G~dl~~eIV~R~-------~ySEa~aSH~~rQiLeal~yCH~n---~IvHRDvkP~nllLASK~~~A~vKL~~FGv 159 (355)
T KOG0033|consen 90 DLVTGGELFEDIVARE-------FYSEADASHCIQQILEALAYCHSN---GIVHRDLKPENLLLASKAKGAAVKLADFGL 159 (355)
T ss_pred ecccchHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeeeeccCCCceeecccce
Confidence 9999999987775542 378888899999999999999998 99999999999999643 3499999999
Q ss_pred hhhcC--CCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 687 VCAQG--GDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 687 a~~~~--~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
|...+ .......||+.|+|||+.....| +..+|||+-|||||-++.|+.||..
T Consensus 160 Ai~l~~g~~~~G~~GtP~fmaPEvvrkdpy---------~kpvDiW~cGViLfiLL~G~~PF~~ 214 (355)
T KOG0033|consen 160 AIEVNDGEAWHGFAGTPGYLSPEVLKKDPY---------SKPVDIWACGVILYILLVGYPPFWD 214 (355)
T ss_pred EEEeCCccccccccCCCcccCHHHhhcCCC---------CCcchhhhhhHHHHHHHhCCCCCCC
Confidence 98774 23556789999999999877664 5688999999999999999999965
No 144
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=9.7e-33 Score=292.79 Aligned_cols=195 Identities=21% Similarity=0.208 Sum_probs=166.1
Q ss_pred CCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC----HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEe
Q 004248 536 FSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK----TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYK 610 (766)
Q Consensus 536 ~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~----~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~E 610 (766)
|+..++||+|+||.||+|.. .+++.||||.+...... .+.+.+|+.++++++|+||+++++.+.+ ++..++|||
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~-~~~~~lv~e 80 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYET-KDALCLVLT 80 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEec-CCEEEEEEE
Confidence 67788999999999999984 57899999998754322 3457889999999999999999987765 568999999
Q ss_pred eCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhc
Q 004248 611 YMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQ 690 (766)
Q Consensus 611 y~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~ 690 (766)
|+++|+|.+++..... ..+++.++..++.|++.||+|||+. +|+||||||+||++++++.+||+|||++...
T Consensus 81 ~~~g~~L~~~l~~~~~-----~~l~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~ 152 (285)
T cd05630 81 LMNGGDLKFHIYHMGE-----AGFEEGRAVFYAAEICCGLEDLHQE---RIVYRDLKPENILLDDHGHIRISDLGLAVHV 152 (285)
T ss_pred ecCCCcHHHHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeccceeec
Confidence 9999999999865432 3489999999999999999999987 9999999999999999999999999998765
Q ss_pred CCC--CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 691 GGD--AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 691 ~~~--~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
... .....++..|+|||...... ++.++||||+||++|||++|+.||..
T Consensus 153 ~~~~~~~~~~g~~~y~aPE~~~~~~---------~~~~~DiwslG~~l~~l~~g~~Pf~~ 203 (285)
T cd05630 153 PEGQTIKGRVGTVGYMAPEVVKNER---------YTFSPDWWALGCLLYEMIAGQSPFQQ 203 (285)
T ss_pred CCCccccCCCCCccccChHHHcCCC---------CCCccccHHHHHHHHHHHhCCCCCCC
Confidence 322 22346788999999876543 46799999999999999999999964
No 145
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=1.4e-32 Score=295.02 Aligned_cols=197 Identities=20% Similarity=0.233 Sum_probs=167.5
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC--HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEe
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK--TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYK 610 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~--~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~E 610 (766)
++|+..+.||+|+||.||+|.. .++..||+|.+...... .+++.+|++++++++||||+++++++.. ++..++|||
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e 79 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYS-DGEISICME 79 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEee-CCEEEEEee
Confidence 4688899999999999999984 56889999988654222 4568899999999999999999998766 678999999
Q ss_pred eCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhc
Q 004248 611 YMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQ 690 (766)
Q Consensus 611 y~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~ 690 (766)
|+++|+|.+++.+.+ .+++..+..++.|+++||+|||+. .+++||||||+||++++++.+||+|||++...
T Consensus 80 y~~~~~L~~~l~~~~-------~~~~~~~~~~~~~i~~~l~~lH~~--~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 150 (308)
T cd06615 80 HMDGGSLDQVLKKAG-------RIPENILGKISIAVLRGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL 150 (308)
T ss_pred ccCCCcHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHhh--CCEEECCCChHHEEEecCCcEEEccCCCcccc
Confidence 999999999997543 388999999999999999999973 27999999999999999999999999998765
Q ss_pred CC-CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 691 GG-DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 691 ~~-~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
.. ......++..|+|||...+.. ++.++|||||||++|||+||+.||...
T Consensus 151 ~~~~~~~~~~~~~~~aPE~~~~~~---------~~~~~DiwslG~~l~~l~~g~~p~~~~ 201 (308)
T cd06615 151 IDSMANSFVGTRSYMSPERLQGTH---------YTVQSDIWSLGLSLVEMAIGRYPIPPP 201 (308)
T ss_pred cccccccCCCCcCccChhHhcCCC---------CCccchHHHHHHHHHHHHhCCCCCCCc
Confidence 32 233456788999999875433 467999999999999999999998543
No 146
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=1.6e-32 Score=286.15 Aligned_cols=197 Identities=21% Similarity=0.332 Sum_probs=167.0
Q ss_pred CCCCccceeecCCcceEEEEEEcCCcEEEEEEeeccccCHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEeeCC
Q 004248 534 GDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMP 613 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey~~ 613 (766)
++|+..+.||+|+||.||+|... |..||+|.++... ..+.|.+|+.++++++|+|++++++++...++..++||||++
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~ 83 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMA 83 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCCc-hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECCC
Confidence 36888899999999999999765 7789999986432 356799999999999999999999987665567899999999
Q ss_pred CCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcCCC
Q 004248 614 NGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGD 693 (766)
Q Consensus 614 ~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~~~ 693 (766)
+|+|.+++.+... ..++|..+..++.|++.||+|||+. +|+||||||+||++++++.+|++|||+++.....
T Consensus 84 ~~~L~~~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~ 155 (256)
T cd05082 84 KGSLVDYLRSRGR-----SVLGGDCLLKFSLDVCEAMEYLEAN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST 155 (256)
T ss_pred CCcHHHHHHhcCC-----CCCCHHHHHHHHHHHHHHHHHHHhC---CEeccccchheEEEcCCCcEEecCCccceecccc
Confidence 9999999975432 3489999999999999999999997 9999999999999999999999999998865433
Q ss_pred CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCCC
Q 004248 694 AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLSS 749 (766)
Q Consensus 694 ~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~~ 749 (766)
......+..|+|||...... ++.++|||||||++|||++ |+.||...
T Consensus 156 ~~~~~~~~~y~aPE~~~~~~---------~~~~~Dv~slG~i~~~l~~~g~~p~~~~ 203 (256)
T cd05082 156 QDTGKLPVKWTAPEALREKK---------FSTKSDVWSFGILLWEIYSFGRVPYPRI 203 (256)
T ss_pred CCCCccceeecCHHHHccCC---------CCchhhhHHHHHHHHHHHhCCCCCCCCC
Confidence 33344556799999775433 4789999999999999998 99998543
No 147
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=1.1e-32 Score=293.27 Aligned_cols=216 Identities=19% Similarity=0.176 Sum_probs=177.4
Q ss_pred ccHHHHHHHhCCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccCHHHHHHHHHHHhhc-CCCCcccceeEEEec
Q 004248 524 FTYQQLLAATGDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVKTEAYLLELDFFSKV-SHARLVPLLGHCMER 601 (766)
Q Consensus 524 ~~~~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~ 601 (766)
++++++..++++|+..+.||+|+||.||+|.. .+++.+|+|.+.......+++.+|+.+++++ +|||++++++++...
T Consensus 12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~ 91 (291)
T cd06639 12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSLPNHPNVVKFYGMFYKA 91 (291)
T ss_pred hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccccHHHHHHHHHHHHHHhcCCCCeEEEEEEEEec
Confidence 55667777889999999999999999999995 6789999999875544456788999999999 899999999988653
Q ss_pred C----CcEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCC
Q 004248 602 E----NEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKF 677 (766)
Q Consensus 602 ~----~~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~ 677 (766)
+ +..|+||||+++|+|.++++.... ....++|..+..++.|++.||+|||+. +|+||||||+||++++++
T Consensus 92 ~~~~~~~~~lv~ey~~~~sL~~~~~~~~~---~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~nili~~~~ 165 (291)
T cd06639 92 DKLVGGQLWLVLELCNGGSVTELVKGLLI---CGQRLDEAMISYILYGALLGLQHLHNN---RIIHRDVKGNNILLTTEG 165 (291)
T ss_pred cccCCCeeEEEEEECCCCcHHHHHHHhhh---cCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCC
Confidence 2 358999999999999998864221 113489999999999999999999987 999999999999999999
Q ss_pred cEEeccchhhhhcCCC---CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 678 EVRLGSLSEVCAQGGD---AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 678 ~~kl~DFG~a~~~~~~---~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
.+||+|||+++..... .....++..|+|||.+....... ..++.++|||||||++|||++|+.||...
T Consensus 166 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~----~~~~~~~Di~slGvi~~el~~g~~p~~~~ 236 (291)
T cd06639 166 GVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYD----YSYDARCDVWSLGITAIELGDGDPPLFDM 236 (291)
T ss_pred CEEEeecccchhcccccccccCccCCccccChhhhcCCCCcc----cccCCccchHHHHHHHHHHhhCCCCCCCC
Confidence 9999999998765321 22345678899999875432111 11578999999999999999999999643
No 148
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=8.6e-33 Score=300.22 Aligned_cols=203 Identities=19% Similarity=0.251 Sum_probs=165.6
Q ss_pred CCCCccceeecCCcceEEEEEE------cCCcEEEEEEeeccccC--HHHHHHHHHHHhhc-CCCCcccceeEEEecCCc
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL------EGGIPVVIKRIDLQSVK--TEAYLLELDFFSKV-SHARLVPLLGHCMERENE 604 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~------~~g~~vavK~l~~~~~~--~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~ 604 (766)
++|+..+.||+|+||.||+|.. .+++.||+|+++..... .+.+.+|++++.++ +||||++++++|...+..
T Consensus 7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~ 86 (337)
T cd05054 7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGP 86 (337)
T ss_pred HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCC
Confidence 4688899999999999999963 23578999998654322 35688899999999 899999999988766667
Q ss_pred EEEEEeeCCCCChhhhhhccCCC------------------------------------------------------CCc
Q 004248 605 KFLVYKYMPNGDLSSSLYRKTNT------------------------------------------------------EDD 630 (766)
Q Consensus 605 ~~lV~Ey~~~GsL~~~l~~~~~~------------------------------------------------------~~~ 630 (766)
.++||||+++|+|.+++...... ...
T Consensus 87 ~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (337)
T cd05054 87 LMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELY 166 (337)
T ss_pred EEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHHh
Confidence 99999999999999998643210 000
Q ss_pred CCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcCCC-----CccceeeecccC
Q 004248 631 LQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGD-----AHQSRITRLLRL 705 (766)
Q Consensus 631 ~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~~~-----~~~~~~t~~y~a 705 (766)
...++|.++..++.||+.||+|||+. +|+||||||+||++++++.+||+|||+++..... .....++..|+|
T Consensus 167 ~~~l~~~~~~~~~~qi~~aL~~lH~~---~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~a 243 (337)
T cd05054 167 KEPLTLEDLISYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMA 243 (337)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccC
Confidence 12689999999999999999999997 9999999999999999999999999999865221 112234567999
Q ss_pred CCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCC
Q 004248 706 PQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLS 748 (766)
Q Consensus 706 Pe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~ 748 (766)
||...... ++.++|||||||++|||++ |+.||..
T Consensus 244 PE~~~~~~---------~~~~~Di~SlGv~l~el~t~g~~p~~~ 278 (337)
T cd05054 244 PESIFDKV---------YTTQSDVWSFGVLLWEIFSLGASPYPG 278 (337)
T ss_pred cHHhcCCC---------CCccccHHHHHHHHHHHHHcCCCCCCC
Confidence 99876543 5789999999999999998 9999854
No 149
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-32 Score=285.86 Aligned_cols=216 Identities=19% Similarity=0.270 Sum_probs=170.1
Q ss_pred hCCCCccceeecCCcceEEEEEEcCCcEEEEEEeeccccCHHHHHHHHHHHhhc--CCCCcccceeEEEecC---CcEEE
Q 004248 533 TGDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKV--SHARLVPLLGHCMERE---NEKFL 607 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l--~H~niv~l~~~~~~~~---~~~~l 607 (766)
.+.....+.||+|.||+||+|.+. |+.||||++.... .+.+.||.+|.+.+ +|+||..+++.-..+. .++||
T Consensus 210 arqI~L~e~IGkGRyGEVwrG~wr-Ge~VAVKiF~srd--E~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwL 286 (513)
T KOG2052|consen 210 ARQIVLQEIIGKGRFGEVWRGRWR-GEDVAVKIFSSRD--ERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWL 286 (513)
T ss_pred hheeEEEEEecCccccceeecccc-CCceEEEEecccc--hhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEE
Confidence 345677899999999999999987 5689999996443 56799999998875 9999999998543222 26899
Q ss_pred EEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhcc-----CCCCCeEecCCCCCCeeeCCCCcEEec
Q 004248 608 VYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHH-----ECTLPFVHRDVQASSILLDDKFEVRLG 682 (766)
Q Consensus 608 V~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-----~~~~~iiHrDlKp~NILl~~~~~~kl~ 682 (766)
|.||-+.|||+|+|.+. .++-...++++..+|.||+|||- +..|.|.|||||+.|||+.+++...|+
T Consensus 287 vTdYHe~GSL~DyL~r~--------tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IA 358 (513)
T KOG2052|consen 287 VTDYHEHGSLYDYLNRN--------TVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIA 358 (513)
T ss_pred eeecccCCcHHHHHhhc--------cCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEe
Confidence 99999999999999763 38999999999999999999994 346899999999999999999999999
Q ss_pred cchhhhhcCC-------CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc----------CCCC
Q 004248 683 SLSEVCAQGG-------DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF----------NNHL 745 (766)
Q Consensus 683 DFG~a~~~~~-------~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt----------G~~p 745 (766)
|+|+|-.... .....+||..|||||++..... . -.++.-..+||||||.|+||++. -+.|
T Consensus 359 DLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin-~--~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~P 435 (513)
T KOG2052|consen 359 DLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETIN-M--KHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLP 435 (513)
T ss_pred eceeeEEecccCCcccCCCCCccceeeccChHHhhhhcC-h--hhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCC
Confidence 9999965422 2446789999999997753211 0 00112357899999999999985 2468
Q ss_pred CCCCccccccceeeEEE
Q 004248 746 NLSSRFGVKQQTTIIKL 762 (766)
Q Consensus 746 ~~~~~~~~~~~~~~~~~ 762 (766)
|.+--+.+...+.+.|+
T Consensus 436 yyd~Vp~DPs~eeMrkV 452 (513)
T KOG2052|consen 436 YYDVVPSDPSFEEMRKV 452 (513)
T ss_pred cccCCCCCCCHHHHhcc
Confidence 86655555555555443
No 150
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=1.3e-32 Score=304.62 Aligned_cols=203 Identities=19% Similarity=0.277 Sum_probs=165.1
Q ss_pred hCCCCccceeecCCcceEEEEEEc------CCcEEEEEEeeccccC--HHHHHHHHHHHhhcC-CCCcccceeEEEecCC
Q 004248 533 TGDFSDANLIKNGHSGDLFRGILE------GGIPVVIKRIDLQSVK--TEAYLLELDFFSKVS-HARLVPLLGHCMEREN 603 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~--~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~ 603 (766)
.++|...++||+|+||.||+|+.. .+..||||+++..... .+.|.+|++++++++ |||||+++++|.+ .+
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~-~~ 114 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTK-SG 114 (400)
T ss_pred ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEcc-CC
Confidence 457888899999999999999842 2357999999654332 467999999999996 9999999998865 56
Q ss_pred cEEEEEeeCCCCChhhhhhccCCCC-------------------------------------------------------
Q 004248 604 EKFLVYKYMPNGDLSSSLYRKTNTE------------------------------------------------------- 628 (766)
Q Consensus 604 ~~~lV~Ey~~~GsL~~~l~~~~~~~------------------------------------------------------- 628 (766)
..|+|||||++|+|.++|++.....
T Consensus 115 ~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (400)
T cd05105 115 PIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEI 194 (400)
T ss_pred ceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhh
Confidence 8999999999999999987532100
Q ss_pred ----------------------------------CcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeC
Q 004248 629 ----------------------------------DDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLD 674 (766)
Q Consensus 629 ----------------------------------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~ 674 (766)
.....++|.++..++.|+++||+|||+. +|+||||||+|||++
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dikp~Nill~ 271 (400)
T cd05105 195 KEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASK---NCVHRDLAARNVLLA 271 (400)
T ss_pred hhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHhEEEe
Confidence 0113488999999999999999999997 999999999999999
Q ss_pred CCCcEEeccchhhhhcCCC-----CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCC
Q 004248 675 DKFEVRLGSLSEVCAQGGD-----AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLS 748 (766)
Q Consensus 675 ~~~~~kl~DFG~a~~~~~~-----~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~ 748 (766)
+++.+||+|||+++..... .....++..|+|||...... ++.++|||||||++|||++ |+.||..
T Consensus 272 ~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~DiwSlGvil~ellt~g~~P~~~ 342 (400)
T cd05105 272 QGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNL---------YTTLSDVWSYGILLWEIFSLGGTPYPG 342 (400)
T ss_pred CCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCC---------CCchhhHHHHHHHHHHHHHCCCCCCcc
Confidence 9999999999999765221 11223456799999876543 4789999999999999997 9999854
No 151
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=1.8e-32 Score=287.03 Aligned_cols=197 Identities=20% Similarity=0.357 Sum_probs=166.3
Q ss_pred CCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccCHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEeeCC
Q 004248 535 DFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMP 613 (766)
Q Consensus 535 ~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey~~ 613 (766)
+|+..+.||+|+||.||+|.. ++++.||+|.+.......+++.+|++++++++||||+++++++.. ++..++||||++
T Consensus 7 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~~ 85 (263)
T cd05052 7 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR-EPPFYIITEFMT 85 (263)
T ss_pred HeEEeeecCCcccceEEEEEEecCCceEEEEEecCCchHHHHHHHHHHHHHhCCCCChhheEEEEcC-CCCcEEEEEeCC
Confidence 477788999999999999995 568899999987655446789999999999999999999998765 567899999999
Q ss_pred CCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcCCC
Q 004248 614 NGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGD 693 (766)
Q Consensus 614 ~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~~~ 693 (766)
+|+|.+++..... ..++|..+..++.|++.||+|||+. +++||||||+||++++++.+||+|||+++.....
T Consensus 86 ~~~L~~~~~~~~~-----~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~ 157 (263)
T cd05052 86 YGNLLDYLRECNR-----QEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 157 (263)
T ss_pred CCcHHHHHHhCCC-----CCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCcEEeCCCccccccccc
Confidence 9999999975432 3489999999999999999999987 9999999999999999999999999999765432
Q ss_pred Cc----cceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCCC
Q 004248 694 AH----QSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLSS 749 (766)
Q Consensus 694 ~~----~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~~ 749 (766)
.. ....+..|+|||...... ++.++|||||||++|||+| |+.||...
T Consensus 158 ~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~Dv~slG~il~el~t~g~~p~~~~ 209 (263)
T cd05052 158 TYTAHAGAKFPIKWTAPESLAYNK---------FSIKSDVWAFGVLLWEIATYGMSPYPGI 209 (263)
T ss_pred eeeccCCCCCccccCCHHHhccCC---------CCchhHHHHHHHHHHHHHcCCCCCCCCC
Confidence 21 112245699999775443 4789999999999999998 89998543
No 152
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=99.98 E-value=7.2e-33 Score=324.37 Aligned_cols=208 Identities=15% Similarity=0.219 Sum_probs=169.1
Q ss_pred HhCCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC---HHHHHHHHHHHhhcCCCCcccceeEEEec-CCcEE
Q 004248 532 ATGDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK---TEAYLLELDFFSKVSHARLVPLLGHCMER-ENEKF 606 (766)
Q Consensus 532 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~---~~~~~~E~~~l~~l~H~niv~l~~~~~~~-~~~~~ 606 (766)
..++|...+.||+|+||.||+|+. .++..||+|.+...... ...|.+|+.++++++|||||++++++... ...+|
T Consensus 11 ~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~ly 90 (1021)
T PTZ00266 11 RLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLY 90 (1021)
T ss_pred ccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEE
Confidence 456899999999999999999994 56789999998754332 45789999999999999999999977643 34689
Q ss_pred EEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCC----CCeEecCCCCCCeeeCCC------
Q 004248 607 LVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECT----LPFVHRDVQASSILLDDK------ 676 (766)
Q Consensus 607 lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~----~~iiHrDlKp~NILl~~~------ 676 (766)
+||||+++|+|.++|..... ....+++..++.|+.||+.||+|||+... .+||||||||+|||++.+
T Consensus 91 IVMEY~~gGSL~~lL~k~~~---~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~ 167 (1021)
T PTZ00266 91 ILMEFCDAGDLSRNIQKCYK---MFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGK 167 (1021)
T ss_pred EEEeCCCCCcHHHHHHHHhh---ccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccccc
Confidence 99999999999999975321 11358999999999999999999998421 369999999999999643
Q ss_pred -----------CcEEeccchhhhhcCCC--CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCC
Q 004248 677 -----------FEVRLGSLSEVCAQGGD--AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNN 743 (766)
Q Consensus 677 -----------~~~kl~DFG~a~~~~~~--~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~ 743 (766)
..+||+|||+++..... .....+|+.|+|||.+...... ++.++||||||||+|||+||+
T Consensus 168 i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~-------~s~KSDVWSLG~ILYELLTGk 240 (1021)
T PTZ00266 168 ITAQANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKS-------YDDKSDMWALGCIIYELCSGK 240 (1021)
T ss_pred ccccccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCC-------CCchhHHHHHHHHHHHHHHCC
Confidence 34899999999876322 3345689999999987543221 578999999999999999999
Q ss_pred CCCCCC
Q 004248 744 HLNLSS 749 (766)
Q Consensus 744 ~p~~~~ 749 (766)
.||...
T Consensus 241 ~PF~~~ 246 (1021)
T PTZ00266 241 TPFHKA 246 (1021)
T ss_pred CCCCcC
Confidence 999543
No 153
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=99.98 E-value=1.7e-32 Score=286.01 Aligned_cols=196 Identities=21% Similarity=0.307 Sum_probs=166.0
Q ss_pred CCCccceeecCCcceEEEEEEcCCcEEEEEEeeccccCHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEeeCCC
Q 004248 535 DFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPN 614 (766)
Q Consensus 535 ~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey~~~ 614 (766)
+|+..+.||+|+||.||+|...++..+|+|.+.......++|.+|++++++++||||+++++++.. .+..|+||||+++
T Consensus 5 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~lv~e~~~~ 83 (256)
T cd05059 5 ELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAMSEDDFIEEAKVMMKLSHPNLVQLYGVCTK-QRPIFIVTEYMAN 83 (256)
T ss_pred HcchhhhhccCCCceEEEeEecCCccEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEEEEEEEEcC-CCceEEEEecCCC
Confidence 477789999999999999998777899999987655556789999999999999999999997765 5679999999999
Q ss_pred CChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcCCCC
Q 004248 615 GDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDA 694 (766)
Q Consensus 615 GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~~~~ 694 (766)
++|.++++.+.. .++|..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++......
T Consensus 84 ~~L~~~l~~~~~------~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~ 154 (256)
T cd05059 84 GCLLNYLRERKG------KLGTEWLLDMCSDVCEAMEYLESN---GFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQ 154 (256)
T ss_pred CCHHHHHHhccc------CCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHhhEEECCCCcEEECCcccceeccccc
Confidence 999999975432 489999999999999999999997 89999999999999999999999999987653221
Q ss_pred -ccc---eeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCCC
Q 004248 695 -HQS---RITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLSS 749 (766)
Q Consensus 695 -~~~---~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~~ 749 (766)
... .++..|+|||...... ++.++|||||||++|||+| |+.||...
T Consensus 155 ~~~~~~~~~~~~y~~Pe~~~~~~---------~~~~~Di~slG~il~~l~~~g~~p~~~~ 205 (256)
T cd05059 155 YTSSQGTKFPVKWAPPEVFDYSR---------FSSKSDVWSFGVLMWEVFSEGKMPYERF 205 (256)
T ss_pred ccccCCCCCCccccCHHHhccCC---------CCchhhHHHHHHHHHHHhccCCCCCCCC
Confidence 111 1234699999876544 4679999999999999999 89998543
No 154
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=99.98 E-value=1.1e-32 Score=301.97 Aligned_cols=197 Identities=17% Similarity=0.198 Sum_probs=165.4
Q ss_pred HhCCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC---HHHHHHHHHHHhhcCCCCcccceeEEEecC-----
Q 004248 532 ATGDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK---TEAYLLELDFFSKVSHARLVPLLGHCMERE----- 602 (766)
Q Consensus 532 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~---~~~~~~E~~~l~~l~H~niv~l~~~~~~~~----- 602 (766)
..++|+..+.||+|+||.||+|.. .+++.||||++...... .+.+.+|+.+++.++||||+++++++....
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 94 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF 94 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence 456899999999999999999984 56899999999653322 457889999999999999999999775321
Q ss_pred CcEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEec
Q 004248 603 NEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLG 682 (766)
Q Consensus 603 ~~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~ 682 (766)
...|+||||+++ +|.+.+.. .+++.++..++.|++.||+|||+. +|+||||||+|||+++++.+||+
T Consensus 95 ~~~~lv~e~~~~-~l~~~~~~---------~l~~~~~~~~~~qi~~aL~~LH~~---givHrDikp~Nill~~~~~~kl~ 161 (355)
T cd07874 95 QDVYLVMELMDA-NLCQVIQM---------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKIL 161 (355)
T ss_pred ceeEEEhhhhcc-cHHHHHhh---------cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEECCCCCEEEe
Confidence 247999999975 77776642 278999999999999999999998 99999999999999999999999
Q ss_pred cchhhhhcCCC--CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCCc
Q 004248 683 SLSEVCAQGGD--AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSSR 750 (766)
Q Consensus 683 DFG~a~~~~~~--~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~~ 750 (766)
|||+++..+.. .....+|+.|+|||...+.. ++.++|||||||++|||++|+.||...+
T Consensus 162 Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~---------~~~~~DiwslG~il~el~~g~~pf~~~~ 222 (355)
T cd07874 162 DFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG---------YKENVDIWSVGCIMGEMVRHKILFPGRD 222 (355)
T ss_pred eCcccccCCCccccCCccccCCccCHHHHcCCC---------CCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 99999876432 23457899999999875443 4789999999999999999999996443
No 155
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=99.98 E-value=2.1e-32 Score=290.26 Aligned_cols=196 Identities=20% Similarity=0.263 Sum_probs=161.8
Q ss_pred CCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC---HHHHHHHHHHHhhc---CCCCcccceeEEEec----CC
Q 004248 535 DFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK---TEAYLLELDFFSKV---SHARLVPLLGHCMER----EN 603 (766)
Q Consensus 535 ~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~---~~~~~~E~~~l~~l---~H~niv~l~~~~~~~----~~ 603 (766)
+|+..+.||+|+||.||+|.. .+|+.||+|.++..... ...+.+|+++++++ +||||+++++++... ..
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 477889999999999999984 57899999998753322 34567788877766 699999999977532 23
Q ss_pred cEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEecc
Q 004248 604 EKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGS 683 (766)
Q Consensus 604 ~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~D 683 (766)
..++||||++ ++|.+++..... ..+++.++..++.|++.||+|||+. +|+||||||+||++++++.+||+|
T Consensus 81 ~~~lv~e~~~-~~l~~~~~~~~~-----~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~kl~d 151 (288)
T cd07863 81 KVTLVFEHVD-QDLRTYLDKVPP-----PGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGQVKLAD 151 (288)
T ss_pred eEEEEEcccc-cCHHHHHHhcCC-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECc
Confidence 5799999998 589998875432 2489999999999999999999998 999999999999999999999999
Q ss_pred chhhhhcCCC--CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 684 LSEVCAQGGD--AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 684 FG~a~~~~~~--~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
||+++..... .....+|..|+|||...... ++.++||||+||++|||++|++||..
T Consensus 152 fg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~DiwslG~~l~~l~~g~~~f~~ 209 (288)
T cd07863 152 FGLARIYSCQMALTPVVVTLWYRAPEVLLQST---------YATPVDMWSVGCIFAEMFRRKPLFCG 209 (288)
T ss_pred cCccccccCcccCCCccccccccCchHhhCCC---------CCCcchhhhHHHHHHHHHhCCcCcCC
Confidence 9999865322 23456788999999875443 47899999999999999999998854
No 156
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=99.98 E-value=1.2e-32 Score=291.83 Aligned_cols=216 Identities=16% Similarity=0.150 Sum_probs=175.6
Q ss_pred ccHHHHHHHhCCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccCHHHHHHHHHHHhhc-CCCCcccceeEEEe-
Q 004248 524 FTYQQLLAATGDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVKTEAYLLELDFFSKV-SHARLVPLLGHCME- 600 (766)
Q Consensus 524 ~~~~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~- 600 (766)
+.++++..+.++|+..+.||+|+||.||+|+. .+++.+|+|.++......+++.+|+++++++ +||||+++++++..
T Consensus 8 ~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 87 (286)
T cd06638 8 IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALSDHPNVVKFYGMYYKK 87 (286)
T ss_pred EEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccchHHHHHHHHHHHHHHhcCCCeeeeeeeeeec
Confidence 44566667889999999999999999999985 5688999998865443456788999999999 69999999998753
Q ss_pred ---cCCcEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCC
Q 004248 601 ---RENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKF 677 (766)
Q Consensus 601 ---~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~ 677 (766)
.++..++||||+++|+|.++++.... ....+++..+..++.|+++||.|||+. +|+||||||+||++++++
T Consensus 88 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~ 161 (286)
T cd06638 88 DVKNGDQLWLVLELCNGGSVTDLVKGFLK---RGERMEEPIIAYILHEALMGLQHLHVN---KTIHRDVKGNNILLTTEG 161 (286)
T ss_pred ccCCCCeEEEEEeecCCCCHHHHHHHhhc---cCccccHHHHHHHHHHHHHHHHHHHhC---CccccCCCHHhEEECCCC
Confidence 23468999999999999998864321 113489999999999999999999997 999999999999999999
Q ss_pred cEEeccchhhhhcCC---CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 678 EVRLGSLSEVCAQGG---DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 678 ~~kl~DFG~a~~~~~---~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
.+||+|||+++.... ......++..|+|||.+........ .++.++||||+||++|||+||+.||...
T Consensus 162 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~----~~~~~~Dv~slGvi~~el~~g~~p~~~~ 232 (286)
T cd06638 162 GVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDS----TYDARCDVWSLGITAIELGDGDPPLADL 232 (286)
T ss_pred CEEEccCCceeecccCCCccccccCCCcccChhhhchhhhccc----cccchhhhhhHHHHHHHHhcCCCCCCCC
Confidence 999999999876532 1233467889999998753321111 1578999999999999999999998543
No 157
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=99.98 E-value=2.9e-32 Score=288.15 Aligned_cols=191 Identities=18% Similarity=0.238 Sum_probs=164.4
Q ss_pred CCCCccceeecCCcceEEEEE-EcCCcEEEEEEeeccccC--HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEe
Q 004248 534 GDFSDANLIKNGHSGDLFRGI-LEGGIPVVIKRIDLQSVK--TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYK 610 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~--~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~E 610 (766)
++|+..++||+|+||.||+|+ ..+++.||+|.+...... .++|.+|++++++++||||+++++++.. ++..++|||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e 79 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFV-ENRISICTE 79 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEE-CCEEEEEEe
Confidence 367888999999999999998 467899999998654322 4679999999999999999999998876 568899999
Q ss_pred eCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhc
Q 004248 611 YMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQ 690 (766)
Q Consensus 611 y~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~ 690 (766)
|+++|+|..+. .+++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 80 ~~~~~~l~~~~-----------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~ 145 (279)
T cd06619 80 FMDGGSLDVYR-----------KIPEHVLGRIAVAVVKGLTYLWSL---KILHRDVKPSNMLVNTRGQVKLCDFGVSTQL 145 (279)
T ss_pred cCCCCChHHhh-----------cCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCCHHHEEECCCCCEEEeeCCcceec
Confidence 99999986542 278888999999999999999997 9999999999999999999999999999765
Q ss_pred CC-CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 691 GG-DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 691 ~~-~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
.. ......++..|+|||...... ++.++|||||||++|||+||+.||..
T Consensus 146 ~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~DvwslG~~l~~l~~g~~pf~~ 195 (279)
T cd06619 146 VNSIAKTYVGTNAYMAPERISGEQ---------YGIHSDVWSLGISFMELALGRFPYPQ 195 (279)
T ss_pred ccccccCCCCChhhcCceeecCCC---------CCCcchHHHHHHHHHHHHhCCCCchh
Confidence 33 234456888999999876543 46899999999999999999999954
No 158
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.98 E-value=1.3e-32 Score=302.26 Aligned_cols=196 Identities=17% Similarity=0.185 Sum_probs=164.8
Q ss_pred HhCCCCccceeecCCcceEEEEEE-cCCcEEEEEEeecccc---CHHHHHHHHHHHhhcCCCCcccceeEEEec-----C
Q 004248 532 ATGDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV---KTEAYLLELDFFSKVSHARLVPLLGHCMER-----E 602 (766)
Q Consensus 532 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-----~ 602 (766)
..++|...+.||+|+||.||+|.. .+++.||||++..... ..+++.+|+.+++.++||||+++++++... .
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence 356899999999999999999984 5688999999965322 245788999999999999999999876432 1
Q ss_pred CcEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEec
Q 004248 603 NEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLG 682 (766)
Q Consensus 603 ~~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~ 682 (766)
...|+||||+++ +|.+.+.. .+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+
T Consensus 102 ~~~~lv~e~~~~-~l~~~~~~---------~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~ 168 (364)
T cd07875 102 QDVYIVMELMDA-NLCQVIQM---------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKIL 168 (364)
T ss_pred CeEEEEEeCCCC-CHHHHHHh---------cCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEECCCCcEEEE
Confidence 357999999975 78777742 278899999999999999999997 99999999999999999999999
Q ss_pred cchhhhhcCCC--CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 683 SLSEVCAQGGD--AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 683 DFG~a~~~~~~--~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
|||+++..+.. .....+|..|+|||.+.+.. ++.++|||||||++|||+||+.||...
T Consensus 169 DfG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~---------~~~~~DiwSlG~il~ell~g~~pf~~~ 228 (364)
T cd07875 169 DFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG---------YKENVDIWSVGCIMGEMIKGGVLFPGT 228 (364)
T ss_pred eCCCccccCCCCcccCCcccCCcCCHHHHhCCC---------CCchhhHHhHHHHHHHHHhCCCCCCCC
Confidence 99999876432 23456889999999876543 478999999999999999999999543
No 159
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=99.98 E-value=1.6e-32 Score=286.42 Aligned_cols=197 Identities=22% Similarity=0.305 Sum_probs=166.9
Q ss_pred CCCCccceeecCCcceEEEEEEcCCcEEEEEEeeccccCHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEeeCC
Q 004248 534 GDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMP 613 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey~~ 613 (766)
++|...+.||+|+||.||+|...++..||||.+.......++|.+|+.++++++||||+++++++.+ .+..++||||++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~~ 82 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMKLSHEKLVQLYGVCTK-QRPIYIVTEYMS 82 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCcccHHHHHHHHHHHhcCCCCCeeeEEEEEcc-CCCcEEEEEcCC
Confidence 3577788999999999999998777789999987655556789999999999999999999998765 457899999999
Q ss_pred CCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcCCC
Q 004248 614 NGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGD 693 (766)
Q Consensus 614 ~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~~~ 693 (766)
+|+|.+++..... .++|.+++.++.||+.||+|||+. +|+||||||+||++++++.+||+|||.++.....
T Consensus 83 ~~~l~~~i~~~~~------~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~ 153 (256)
T cd05113 83 NGCLLNYLREHGK------RFQPSQLLEMCKDVCEGMAYLESK---QFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDD 153 (256)
T ss_pred CCcHHHHHHhcCC------CCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCCEEECCCccceecCCC
Confidence 9999999975432 489999999999999999999987 9999999999999999999999999998765322
Q ss_pred C-c---cceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCCC
Q 004248 694 A-H---QSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLSS 749 (766)
Q Consensus 694 ~-~---~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~~ 749 (766)
. . ...++..|++||...... ++.++|||||||++|||+| |+.||...
T Consensus 154 ~~~~~~~~~~~~~y~~pe~~~~~~---------~~~~~Di~slG~~l~~l~~~g~~p~~~~ 205 (256)
T cd05113 154 EYTSSVGSKFPVRWSPPEVLLYSK---------FSSKSDVWAFGVLMWEVYSLGKMPYERF 205 (256)
T ss_pred ceeecCCCccChhhCCHHHHhcCc---------ccchhHHHHHHHHHHHHhcCCCCCcCcC
Confidence 1 1 122345799999875443 4679999999999999999 99998543
No 160
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=99.98 E-value=2.8e-32 Score=293.82 Aligned_cols=197 Identities=14% Similarity=0.208 Sum_probs=159.0
Q ss_pred cceeecCCcceEEEEEEc---CCcEEEEEEeeccccCHHHHHHHHHHHhhcCCCCcccceeEEEec-CCcEEEEEeeCCC
Q 004248 539 ANLIKNGHSGDLFRGILE---GGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMER-ENEKFLVYKYMPN 614 (766)
Q Consensus 539 ~~~ig~G~~g~Vy~~~~~---~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-~~~~~lV~Ey~~~ 614 (766)
.++||+|+||+||+|+.. +++.||+|.+.... ....+.+|++++++++|||||++++++... +...|+||||++
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~- 83 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG-ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE- 83 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC-CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC-
Confidence 468999999999999853 56899999986443 245678999999999999999999977542 346899999997
Q ss_pred CChhhhhhccCCC--CCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeee----CCCCcEEeccchhhh
Q 004248 615 GDLSSSLYRKTNT--EDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILL----DDKFEVRLGSLSEVC 688 (766)
Q Consensus 615 GsL~~~l~~~~~~--~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl----~~~~~~kl~DFG~a~ 688 (766)
++|.+++...... ......+++.....++.|++.||+|||+. +|+||||||+|||+ +.++.+||+|||+++
T Consensus 84 ~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~ 160 (317)
T cd07868 84 HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMGFAR 160 (317)
T ss_pred CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEecCCCCcCcEEEeecCcee
Confidence 5898887543211 11123589999999999999999999998 99999999999999 456889999999998
Q ss_pred hcCCC------CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 689 AQGGD------AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 689 ~~~~~------~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
..... .....+|+.|+|||.+.+... ++.++||||+||++|||+||++||..
T Consensus 161 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~--------~~~~~DiwslG~il~el~~g~~~f~~ 218 (317)
T cd07868 161 LFNSPLKPLADLDPVVVTFWYRAPELLLGARH--------YTKAIDIWAIGCIFAELLTSEPIFHC 218 (317)
T ss_pred ccCCCCccccccCCccccccccCCHHHcCCCC--------cCchhhHHHHHHHHHHHHhCCCCccC
Confidence 65322 234567899999998765332 47899999999999999999999953
No 161
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=99.98 E-value=3.1e-32 Score=283.48 Aligned_cols=198 Identities=21% Similarity=0.274 Sum_probs=168.8
Q ss_pred CCCccceeecCCcceEEEEEE-cCCcEEEEEEeecccc---CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEe
Q 004248 535 DFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV---KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYK 610 (766)
Q Consensus 535 ~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~E 610 (766)
+|+..+.||+|++|.||+|.. .+++.||+|.+..... ..+++.+|++++++++||||+++++++.+ ++..|+|||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e 79 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLD-KGKLNIVME 79 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeecc-CCEEEEEEE
Confidence 477789999999999999995 5789999999875432 25679999999999999999999997765 568999999
Q ss_pred eCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhc
Q 004248 611 YMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQ 690 (766)
Q Consensus 611 y~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~ 690 (766)
|+++++|.++++.... ..+++.++..++.|++.||.|||+. +|+||||||+||++++++.+||+|||+++..
T Consensus 80 ~~~~~~L~~~l~~~~~-----~~~~~~~~~~i~~~l~~al~~lH~~---~i~h~dl~~~nili~~~~~~~l~df~~~~~~ 151 (256)
T cd08529 80 YAENGDLHKLLKMQRG-----RPLPEDQVWRFFIQILLGLAHLHSK---KILHRDIKSLNLFLDAYDNVKIGDLGVAKLL 151 (256)
T ss_pred eCCCCcHHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEeCCCCEEEcccccceec
Confidence 9999999999976422 3589999999999999999999987 9999999999999999999999999998865
Q ss_pred CCC---CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCCc
Q 004248 691 GGD---AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSSR 750 (766)
Q Consensus 691 ~~~---~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~~ 750 (766)
... .....++..|+|||...... ++.++|||||||+++||+||+.||....
T Consensus 152 ~~~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~Di~slG~il~~l~~g~~p~~~~~ 205 (256)
T cd08529 152 SDNTNFANTIVGTPYYLSPELCEDKP---------YNEKSDVWALGVVLYECCTGKHPFDANN 205 (256)
T ss_pred cCccchhhccccCccccCHHHhcCCC---------CCCccchHHHHHHHHHHHhCCCCCCCCC
Confidence 322 12335678899999876543 4689999999999999999999996443
No 162
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=99.98 E-value=2.5e-32 Score=285.85 Aligned_cols=196 Identities=20% Similarity=0.305 Sum_probs=165.6
Q ss_pred CCCCccceeecCCcceEEEEEEcCCcEEEEEEeeccccCHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEeeCC
Q 004248 534 GDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMP 613 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey~~ 613 (766)
++|...+.||+|+||.||+|+..++..||+|+++......++|.+|++++++++||||+++++++. ++..++||||++
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~--~~~~~lv~e~~~ 83 (262)
T cd05071 6 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS--EEPIYIVTEYMS 83 (262)
T ss_pred HHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCccCHHHHHHHHHHHHhCCCCCcceEEEEEC--CCCcEEEEEcCC
Confidence 458888999999999999999777778999999765555678999999999999999999998663 356899999999
Q ss_pred CCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcCCC
Q 004248 614 NGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGD 693 (766)
Q Consensus 614 ~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~~~ 693 (766)
+|+|.+++.+... ..++|.++..++.|++.||+|||+. +|+||||||+||++++++.+||+|||.++.....
T Consensus 84 ~~~L~~~~~~~~~-----~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~ 155 (262)
T cd05071 84 KGSLLDFLKGEMG-----KYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDN 155 (262)
T ss_pred CCcHHHHHhhccc-----cCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcccEEEcCCCcEEeccCCceeecccc
Confidence 9999999975322 2479999999999999999999997 9999999999999999999999999999765322
Q ss_pred Cc----cceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCC
Q 004248 694 AH----QSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLS 748 (766)
Q Consensus 694 ~~----~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~ 748 (766)
.. ...++..|++||...... ++.++|||||||++|||+| |+.||..
T Consensus 156 ~~~~~~~~~~~~~y~~PE~~~~~~---------~~~~~DvwslG~~l~ellt~g~~p~~~ 206 (262)
T cd05071 156 EYTARQGAKFPIKWTAPEAALYGR---------FTIKSDVWSFGILLTELTTKGRVPYPG 206 (262)
T ss_pred ccccccCCcccceecCHhHhccCC---------CCchhhHHHHHHHHHHHHcCCCCCCCC
Confidence 11 223456799999765443 5789999999999999999 8888853
No 163
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=99.98 E-value=2.5e-32 Score=291.94 Aligned_cols=197 Identities=19% Similarity=0.258 Sum_probs=165.7
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC--HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEe
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK--TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYK 610 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~--~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~E 610 (766)
++|...+.||+|+||.||+|+. .+++.||+|.++..... ...+.+|++++++++||||+++++++.. ++..++|||
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~-~~~~~lv~e 84 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHT-EKSLTLVFE 84 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEec-CCeEEEEEe
Confidence 5688899999999999999985 46889999998654322 4568899999999999999999998765 568999999
Q ss_pred eCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhc
Q 004248 611 YMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQ 690 (766)
Q Consensus 611 y~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~ 690 (766)
|++ ++|.+++.... ..+++.....++.|+++||+|||+. +|+||||||+||++++++.+||+|||+++..
T Consensus 85 ~~~-~~l~~~l~~~~------~~~~~~~~~~~~~qi~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~ 154 (301)
T cd07873 85 YLD-KDLKQYLDDCG------NSINMHNVKLFLFQLLRGLNYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAK 154 (301)
T ss_pred ccc-cCHHHHHHhcC------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHHHEEECCCCcEEECcCcchhcc
Confidence 998 59999886543 2488999999999999999999997 9999999999999999999999999999764
Q ss_pred CCC---CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 691 GGD---AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 691 ~~~---~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
... .....++..|+|||....... ++.++|||||||++|||+||+.||...
T Consensus 155 ~~~~~~~~~~~~~~~y~~PE~~~~~~~--------~~~~~Dv~slG~~l~el~tg~~~f~~~ 208 (301)
T cd07873 155 SIPTKTYSNEVVTLWYRPPDILLGSTD--------YSTQIDMWGVGCIFYEMSTGRPLFPGS 208 (301)
T ss_pred CCCCCcccccceeecccCcHHHhCCCC--------CccHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 321 223456889999998654321 468999999999999999999999543
No 164
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.98 E-value=1.1e-33 Score=320.85 Aligned_cols=208 Identities=19% Similarity=0.184 Sum_probs=174.8
Q ss_pred HHHHHHhCCCCccceeecCCcceEEEEE-EcCCcEEEEEEeecccc----CHHHHHHHHHHHhhcCCCCcccceeEEEec
Q 004248 527 QQLLAATGDFSDANLIKNGHSGDLFRGI-LEGGIPVVIKRIDLQSV----KTEAYLLELDFFSKVSHARLVPLLGHCMER 601 (766)
Q Consensus 527 ~~l~~~~~~~~~~~~ig~G~~g~Vy~~~-~~~g~~vavK~l~~~~~----~~~~~~~E~~~l~~l~H~niv~l~~~~~~~ 601 (766)
.++.-..+||++.++||+|+||.|..++ ..+++.+|+|++.+..+ ...-|..|-.+|..-+.+.||.++..| ++
T Consensus 68 ~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAF-QD 146 (1317)
T KOG0612|consen 68 KELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAF-QD 146 (1317)
T ss_pred HHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHh-cC
Confidence 3555667889999999999999999998 56799999999976433 234588899999999999999998644 55
Q ss_pred CCcEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEe
Q 004248 602 ENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRL 681 (766)
Q Consensus 602 ~~~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl 681 (766)
+.++|+|||||+||||..++.+.. .+++.-...|+.+|+.||.-+|+. ++|||||||+|||||..|++|+
T Consensus 147 ~~~LYlVMdY~pGGDlltLlSk~~-------~~pE~~ArFY~aEiVlAldslH~m---gyVHRDiKPDNvLld~~GHikL 216 (1317)
T KOG0612|consen 147 ERYLYLVMDYMPGGDLLTLLSKFD-------RLPEDWARFYTAEIVLALDSLHSM---GYVHRDIKPDNVLLDKSGHIKL 216 (1317)
T ss_pred ccceEEEEecccCchHHHHHhhcC-------CChHHHHHHHHHHHHHHHHHHHhc---cceeccCCcceeEecccCcEee
Confidence 789999999999999999997654 378888889999999999999997 9999999999999999999999
Q ss_pred ccchhhhhcCCC----CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 682 GSLSEVCAQGGD----AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 682 ~DFG~a~~~~~~----~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
+|||.+-..+.+ ....+|||-|.+||++.....|.. .|++.+|+||+||++|||+.|.-||...
T Consensus 217 ADFGsClkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g----~yG~ecDwWSlGV~~YEMlyG~TPFYad 284 (1317)
T KOG0612|consen 217 ADFGSCLKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKG----EYGRECDWWSLGVFMYEMLYGETPFYAD 284 (1317)
T ss_pred ccchhHHhcCCCCcEEeccccCCCCccCHHHHHhhcCCcc----ccCCccchhhhHHHHHHHHcCCCcchHH
Confidence 999988665433 345689999999997654322211 2789999999999999999999999543
No 165
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=99.98 E-value=3.4e-32 Score=287.70 Aligned_cols=196 Identities=22% Similarity=0.270 Sum_probs=161.7
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCc----EEEEEEeeccccC--HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGI----PVVIKRIDLQSVK--TEAYLLELDFFSKVSHARLVPLLGHCMERENEKF 606 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~----~vavK~l~~~~~~--~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~ 606 (766)
++|+..+.||+|+||+||+|+. .+++ .||+|.+...... .+++..|+.++++++|||||++++++. +...+
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~--~~~~~ 84 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICP--GASLQ 84 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEEC--CCccE
Confidence 4678889999999999999985 4454 5788887543322 356888999999999999999999764 34678
Q ss_pred EEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchh
Q 004248 607 LVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSE 686 (766)
Q Consensus 607 lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~ 686 (766)
+|+||+++|+|.+++..... .++|..+..++.||+.||+|||+. +++||||||+||++++++.+||+|||+
T Consensus 85 ~i~e~~~~gsL~~~l~~~~~------~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~kl~Dfg~ 155 (279)
T cd05111 85 LVTQLSPLGSLLDHVRQHRD------SLDPQRLLNWCVQIAKGMYYLEEH---RMVHRNLAARNILLKSDSIVQIADFGV 155 (279)
T ss_pred EEEEeCCCCcHHHHHHhccc------CCCHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEEcCCcc
Confidence 99999999999999975432 489999999999999999999997 899999999999999999999999999
Q ss_pred hhhcCCC-----CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCCC
Q 004248 687 VCAQGGD-----AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLSS 749 (766)
Q Consensus 687 a~~~~~~-----~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~~ 749 (766)
++..... .....++..|++||....+. ++.++|||||||++|||+| |+.||...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~---------~~~~~Dv~slG~il~el~t~g~~p~~~~ 215 (279)
T cd05111 156 ADLLYPDDKKYFYSEHKTPIKWMALESILFGR---------YTHQSDVWSYGVTVWEMMSYGAEPYAGM 215 (279)
T ss_pred ceeccCCCcccccCCCCCcccccCHHHhccCC---------cCchhhHHHHHHHHHHHHcCCCCCCCCC
Confidence 9765221 12234566799999876544 4789999999999999998 99998543
No 166
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=99.98 E-value=3.6e-32 Score=284.10 Aligned_cols=197 Identities=19% Similarity=0.337 Sum_probs=168.1
Q ss_pred CCCCccceeecCCcceEEEEEEcCCcEEEEEEeeccccCHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEeeCC
Q 004248 534 GDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMP 613 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey~~ 613 (766)
++|+..++||+|+||.||+|...+++.||+|.+.......++|.+|+.++++++||||+++++++. .+..++||||++
T Consensus 6 ~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~--~~~~~~v~e~~~ 83 (260)
T cd05067 6 ETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSMSPEAFLAEANLMKQLQHPRLVRLYAVVT--QEPIYIITEYME 83 (260)
T ss_pred HHceeeeeeccCccceEEeeecCCCceEEEEEecCCCCcHHHHHHHHHHHHhcCCcCeeeEEEEEc--cCCcEEEEEcCC
Confidence 468888999999999999999888999999999876666778999999999999999999998653 357899999999
Q ss_pred CCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcCC-
Q 004248 614 NGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGG- 692 (766)
Q Consensus 614 ~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~~- 692 (766)
+|+|.+++....+ ..+++.++..++.|++.||+|||+. +++||||||+||++++++.++|+|||+++....
T Consensus 84 ~~~L~~~~~~~~~-----~~~~~~~~~~i~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~ 155 (260)
T cd05067 84 NGSLVDFLKTPEG-----IKLTINKLIDMAAQIAEGMAFIERK---NYIHRDLRAANILVSETLCCKIADFGLARLIEDN 155 (260)
T ss_pred CCCHHHHHHhcCC-----CCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHHhEEEcCCCCEEEccCcceeecCCC
Confidence 9999999875432 3589999999999999999999987 999999999999999999999999999876532
Q ss_pred CCc---cceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCCC
Q 004248 693 DAH---QSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLSS 749 (766)
Q Consensus 693 ~~~---~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~~ 749 (766)
... ...++..|+|||...... ++.++|||||||++|||++ |+.||...
T Consensus 156 ~~~~~~~~~~~~~y~~pe~~~~~~---------~~~~~Di~slG~~l~el~~~g~~p~~~~ 207 (260)
T cd05067 156 EYTAREGAKFPIKWTAPEAINYGT---------FTIKSDVWSFGILLTEIVTYGRIPYPGM 207 (260)
T ss_pred CcccccCCcccccccCHHHhccCC---------cCcccchHHHHHHHHHHHhCCCCCCCCC
Confidence 111 123356799999875443 4679999999999999999 99999543
No 167
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.98 E-value=3.3e-32 Score=290.39 Aligned_cols=196 Identities=18% Similarity=0.262 Sum_probs=168.4
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC-HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEee
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK-TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKY 611 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~-~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey 611 (766)
++|+..+.||+|+||.||+|+. .+++.||+|.+...... .+.+.+|++++++++||||+++++++.. +...|+||||
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~-~~~~~lv~e~ 98 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV-GDELWVVMEY 98 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEe-CCEEEEeecc
Confidence 4688889999999999999984 57899999999765443 5678999999999999999999997765 5689999999
Q ss_pred CCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcC
Q 004248 612 MPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQG 691 (766)
Q Consensus 612 ~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~ 691 (766)
+++|+|.+++.+. .+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 99 ~~~~~L~~~~~~~--------~~~~~~~~~i~~ql~~aL~~LH~~---gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~ 167 (296)
T cd06654 99 LAGGSLTDVVTET--------CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQIT 167 (296)
T ss_pred cCCCCHHHHHHhc--------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEECccccchhcc
Confidence 9999999998642 378999999999999999999997 99999999999999999999999999987653
Q ss_pred CC---CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCCc
Q 004248 692 GD---AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSSR 750 (766)
Q Consensus 692 ~~---~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~~ 750 (766)
.. .....++..|+|||...... .+.++|||||||++|||+||+.||....
T Consensus 168 ~~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~Dv~s~Gvil~~l~~g~~pf~~~~ 220 (296)
T cd06654 168 PEQSKRSTMVGTPYWMAPEVVTRKA---------YGPKVDIWSLGIMAIEMIEGEPPYLNEN 220 (296)
T ss_pred ccccccCcccCCccccCHHHHcCCC---------CCccchHHHHHHHHHHHHhCCCCCCCCC
Confidence 22 22346788999999876433 4689999999999999999999996543
No 168
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.98 E-value=2.2e-32 Score=286.80 Aligned_cols=199 Identities=19% Similarity=0.238 Sum_probs=167.3
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC-HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEee
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK-TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKY 611 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~-~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey 611 (766)
++|...+.||+|+||.||+|+. .+++.||+|.++..... .+.+.+|+.+++.++||||+++++++.. ++..|+||||
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~-~~~~~lv~e~ 87 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLR-RDKLWICMEF 87 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEe-CCEEEEEEec
Confidence 3577788999999999999984 56899999998755433 4568899999999999999999997765 5689999999
Q ss_pred CCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcC
Q 004248 612 MPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQG 691 (766)
Q Consensus 612 ~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~ 691 (766)
+++|+|.+++...+ .+++.+...++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 88 ~~~~~L~~~~~~~~-------~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~ 157 (267)
T cd06645 88 CGGGSLQDIYHVTG-------PLSESQIAYVSRETLQGLYYLHSK---GKMHRDIKGANILLTDNGHVKLADFGVSAQIT 157 (267)
T ss_pred cCCCcHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECcceeeeEcc
Confidence 99999999987543 389999999999999999999997 99999999999999999999999999987543
Q ss_pred CC---CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 692 GD---AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 692 ~~---~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
.. .....++..|+|||.......+. ++.++||||+||++|||++|+.||...
T Consensus 158 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~------~~~~~DvwSlG~il~~l~~~~~p~~~~ 212 (267)
T cd06645 158 ATIAKRKSFIGTPYWMAPEVAAVERKGG------YNQLCDIWAVGITAIELAELQPPMFDL 212 (267)
T ss_pred CcccccccccCcccccChhhhccccCCC------CCchhhhHHHHHHHHHHhcCCCCcccc
Confidence 22 22346788999999864222121 578999999999999999999998543
No 169
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=99.98 E-value=4.7e-32 Score=288.22 Aligned_cols=197 Identities=19% Similarity=0.209 Sum_probs=170.9
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeecccc----CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV----KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLV 608 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~----~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV 608 (766)
++|...+.||+|+||.||++.. .+++.||+|.+..... ..+.+.+|++++++++||||+++++++.. ++..|+|
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~~v 79 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQD-DSNLYLV 79 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEc-CCeEEEE
Confidence 4688889999999999999995 5689999999865332 24578999999999999999999997765 5679999
Q ss_pred EeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhh
Q 004248 609 YKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVC 688 (766)
Q Consensus 609 ~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~ 688 (766)
|||+++|+|.+++.+.. .+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++
T Consensus 80 ~e~~~~~~L~~~~~~~~-------~l~~~~~~~~~~qil~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~dfg~~~ 149 (290)
T cd05580 80 MEYVPGGELFSHLRKSG-------RFPEPVARFYAAQVVLALEYLHSL---DIVYRDLKPENLLLDSDGYIKITDFGFAK 149 (290)
T ss_pred EecCCCCCHHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEeeCCCcc
Confidence 99999999999997653 389999999999999999999997 99999999999999999999999999998
Q ss_pred hcCCCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCCc
Q 004248 689 AQGGDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSSR 750 (766)
Q Consensus 689 ~~~~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~~ 750 (766)
..........++..|+|||...... .+.++|||||||++|||+||+.||...+
T Consensus 150 ~~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~Di~slG~il~~l~~g~~p~~~~~ 202 (290)
T cd05580 150 RVKGRTYTLCGTPEYLAPEIILSKG---------YGKAVDWWALGILIYEMLAGYPPFFDDN 202 (290)
T ss_pred ccCCCCCCCCCCccccChhhhcCCC---------CCccccHHHHHHHHHHHHhCCCCCCCCC
Confidence 7755555556788999999875443 4689999999999999999999996544
No 170
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=99.98 E-value=5.5e-32 Score=282.95 Aligned_cols=196 Identities=18% Similarity=0.267 Sum_probs=167.1
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeecccc------CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV------KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKF 606 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~------~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~ 606 (766)
++|+..+.||+|++|.||+|.. .++++||+|.+..... ..+.+.+|++++++++||||+++++++.. ++..+
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~ 80 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRD-DETLS 80 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEcc-CCeEE
Confidence 4688899999999999999984 5789999999864322 13468899999999999999999997765 56899
Q ss_pred EEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchh
Q 004248 607 LVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSE 686 (766)
Q Consensus 607 lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~ 686 (766)
+|+||+++++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+
T Consensus 81 ~v~e~~~~~~l~~~~~~~~-------~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nilv~~~~~~~l~dfg~ 150 (263)
T cd06625 81 IFMEYMPGGSVKDQLKAYG-------ALTETVTRKYTRQILEGVEYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGA 150 (263)
T ss_pred EEEEECCCCcHHHHHHHhC-------CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeeccc
Confidence 9999999999999987543 388999999999999999999997 999999999999999999999999999
Q ss_pred hhhcCCCC------ccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 687 VCAQGGDA------HQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 687 a~~~~~~~------~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
++...... ....++..|+|||...... ++.++||||+||++|||++|+.||...
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~Di~slG~il~el~~g~~p~~~~ 210 (263)
T cd06625 151 SKRLQTICSSGTGMKSVTGTPYWMSPEVISGEG---------YGRKADVWSVGCTVVEMLTEKPPWAEF 210 (263)
T ss_pred ceeccccccccccccCCCcCccccCcceeccCC---------CCchhhhHHHHHHHHHHHhCCCCcccc
Confidence 87543211 2345678899999886544 468999999999999999999999644
No 171
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.98 E-value=4.4e-32 Score=287.31 Aligned_cols=203 Identities=22% Similarity=0.286 Sum_probs=165.1
Q ss_pred CCCCccceeecCCcceEEEEEE-----cCCcEEEEEEeeccccC--HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-----EGGIPVVIKRIDLQSVK--TEAYLLELDFFSKVSHARLVPLLGHCMERENEKF 606 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-----~~g~~vavK~l~~~~~~--~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~ 606 (766)
++|+..+.||+|+||.||+|.. .++..||+|.+...... .++|.+|++++++++||||+++++++.. ++..|
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-~~~~~ 83 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQ-EQPVC 83 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEec-CCceE
Confidence 3577789999999999999983 34679999999643322 3578999999999999999999997765 56799
Q ss_pred EEEeeCCCCChhhhhhccCCC----------CCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCC
Q 004248 607 LVYKYMPNGDLSSSLYRKTNT----------EDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDK 676 (766)
Q Consensus 607 lV~Ey~~~GsL~~~l~~~~~~----------~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~ 676 (766)
+||||+++|+|.+++..+... ......+++.+...++.|++.||+|||+. +|+||||||+||+++++
T Consensus 84 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~nili~~~ 160 (283)
T cd05090 84 MLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSH---FFVHKDLAARNILIGEQ 160 (283)
T ss_pred EEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhc---CeehhccccceEEEcCC
Confidence 999999999999998643210 01123589999999999999999999997 99999999999999999
Q ss_pred CcEEeccchhhhhcCCC-----CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCCC
Q 004248 677 FEVRLGSLSEVCAQGGD-----AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLSS 749 (766)
Q Consensus 677 ~~~kl~DFG~a~~~~~~-----~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~~ 749 (766)
+.+||+|||+++..... .....++..|+|||...... ++.++|||||||++|||+| |+.||...
T Consensus 161 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~Dv~slG~il~el~~~g~~p~~~~ 230 (283)
T cd05090 161 LHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGK---------FSSDSDIWSFGVVLWEIFSFGLQPYYGF 230 (283)
T ss_pred CcEEeccccccccccCCcceecccCCCccceecChHHhccCC---------CCchhhhHHHHHHHHHHHcCCCCCCCCC
Confidence 99999999999765221 12233456799999875443 4789999999999999999 99998543
No 172
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=99.98 E-value=3.1e-32 Score=288.26 Aligned_cols=203 Identities=24% Similarity=0.363 Sum_probs=166.2
Q ss_pred CCCCccceeecCCcceEEEEEEcC------CcEEEEEEeeccccC--HHHHHHHHHHHhhcCCCCcccceeEEEecCCcE
Q 004248 534 GDFSDANLIKNGHSGDLFRGILEG------GIPVVIKRIDLQSVK--TEAYLLELDFFSKVSHARLVPLLGHCMERENEK 605 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~~~------g~~vavK~l~~~~~~--~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 605 (766)
++|+..+.||+|+||.||+|...+ ...||+|.+...... .++|.+|++++++++||||+++++++.. .+..
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~-~~~~ 83 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTK-EQPT 83 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcC-CCce
Confidence 357888999999999999998532 268999998654322 4579999999999999999999997765 5678
Q ss_pred EEEEeeCCCCChhhhhhccCCCC---------CcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCC
Q 004248 606 FLVYKYMPNGDLSSSLYRKTNTE---------DDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDK 676 (766)
Q Consensus 606 ~lV~Ey~~~GsL~~~l~~~~~~~---------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~ 676 (766)
+++|||+++|+|.+++....... .....+++.+...++.|++.||+|||+. +|+||||||+||+++++
T Consensus 84 ~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nil~~~~ 160 (283)
T cd05048 84 CMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSH---HFVHRDLAARNCLVGEG 160 (283)
T ss_pred EEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccccceEEEcCC
Confidence 99999999999999997542210 0114589999999999999999999998 99999999999999999
Q ss_pred CcEEeccchhhhhcCCC-----CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCCC
Q 004248 677 FEVRLGSLSEVCAQGGD-----AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLSS 749 (766)
Q Consensus 677 ~~~kl~DFG~a~~~~~~-----~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~~ 749 (766)
+.+||+|||+++..... .....++..|+|||...... ++.++|||||||++|||+| |+.||...
T Consensus 161 ~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~sDv~slG~il~el~~~g~~p~~~~ 230 (283)
T cd05048 161 LTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGK---------FTTESDIWSFGVVLWEIFSYGLQPYYGF 230 (283)
T ss_pred CcEEECCCcceeeccccccccccCCCcccccccCHHHhccCc---------CchhhhHHHHHHHHHHHHcCCCCCCCCC
Confidence 99999999998754221 12234567899999875443 4789999999999999998 99999643
No 173
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=99.98 E-value=4.2e-32 Score=286.70 Aligned_cols=203 Identities=20% Similarity=0.302 Sum_probs=167.6
Q ss_pred CCCCccceeecCCcceEEEEEEc------CCcEEEEEEeeccccC--HHHHHHHHHHHhhcCCCCcccceeEEEecCCcE
Q 004248 534 GDFSDANLIKNGHSGDLFRGILE------GGIPVVIKRIDLQSVK--TEAYLLELDFFSKVSHARLVPLLGHCMERENEK 605 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~--~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 605 (766)
++|...+.||+|+||.||+|... +++.||||.++..... .++|.+|++++++++||||+++++++.. .+..
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~ 83 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTE-GDPP 83 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEec-CCCe
Confidence 45777899999999999999853 3578999998654333 4689999999999999999999998876 5689
Q ss_pred EEEEeeCCCCChhhhhhccCCC-------CCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCc
Q 004248 606 FLVYKYMPNGDLSSSLYRKTNT-------EDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFE 678 (766)
Q Consensus 606 ~lV~Ey~~~GsL~~~l~~~~~~-------~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~ 678 (766)
++||||+++|+|.++++..+.. ......+++.++..++.|++.|++|||+. +++||||||+||+++.++.
T Consensus 84 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~ 160 (280)
T cd05049 84 IMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQ---HFVHRDLATRNCLVGYDLV 160 (280)
T ss_pred EEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeeccccccceEEEcCCCe
Confidence 9999999999999999764320 11224589999999999999999999997 9999999999999999999
Q ss_pred EEeccchhhhhcCCC-----CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCCC
Q 004248 679 VRLGSLSEVCAQGGD-----AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLSS 749 (766)
Q Consensus 679 ~kl~DFG~a~~~~~~-----~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~~ 749 (766)
+||+|||+++..... .....++..|+|||...... +++++|||||||++|||++ |+.||...
T Consensus 161 ~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~Di~slG~il~e~~~~g~~p~~~~ 228 (280)
T cd05049 161 VKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRK---------FTTESDVWSFGVVLWEIFTYGKQPWYGL 228 (280)
T ss_pred EEECCcccceecccCcceecCCCCcccceecChhhhccCC---------cchhhhHHHHHHHHHHHHhcCCCCCCCC
Confidence 999999998754211 12223456799999876544 4789999999999999999 99998543
No 174
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=99.98 E-value=3.3e-32 Score=287.99 Aligned_cols=214 Identities=18% Similarity=0.231 Sum_probs=176.4
Q ss_pred ccHHHHHHHhCCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccCHHHHHHHHHHHhhc-CCCCcccceeEEEec
Q 004248 524 FTYQQLLAATGDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVKTEAYLLELDFFSKV-SHARLVPLLGHCMER 601 (766)
Q Consensus 524 ~~~~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~ 601 (766)
.++.++..+.+.|+..+.||+|+||.||+|.. .+++.||+|.+........++.+|+.+++++ +||||+++++++...
T Consensus 6 ~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~ 85 (282)
T cd06636 6 IDLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHRNIATYYGAFIKK 85 (282)
T ss_pred hhhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecChHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcc
Confidence 45566666778899999999999999999995 6789999999876554556789999999999 699999999987532
Q ss_pred -----CCcEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCC
Q 004248 602 -----ENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDK 676 (766)
Q Consensus 602 -----~~~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~ 676 (766)
.+..|+||||+++|+|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+||+++++
T Consensus 86 ~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~-----~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dl~~~nili~~~ 157 (282)
T cd06636 86 SPPGHDDQLWLVMEFCGAGSVTDLVKNTKG-----NALKEDWIAYICREILRGLAHLHAH---KVIHRDIKGQNVLLTEN 157 (282)
T ss_pred cccCCCCEEEEEEEeCCCCcHHHHHHHccC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCC
Confidence 3468999999999999999975432 3478888999999999999999997 99999999999999999
Q ss_pred CcEEeccchhhhhcCC---CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 677 FEVRLGSLSEVCAQGG---DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 677 ~~~kl~DFG~a~~~~~---~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
+.+||+|||+++.... ......++..|+|||.+......... ++.++|||||||++|||+||+.||...
T Consensus 158 ~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~----~~~~~DvwslG~~l~el~~g~~p~~~~ 229 (282)
T cd06636 158 AEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDAT----YDYRSDIWSLGITAIEMAEGAPPLCDM 229 (282)
T ss_pred CCEEEeeCcchhhhhccccCCCcccccccccCHhhcCcccCcCcC----CCcccchhHHHHHHHHHHhCCCCcccc
Confidence 9999999999876532 12334578899999987532211111 578999999999999999999999543
No 175
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=99.98 E-value=4.4e-32 Score=283.50 Aligned_cols=196 Identities=19% Similarity=0.337 Sum_probs=166.4
Q ss_pred CCCCccceeecCCcceEEEEEEcCCcEEEEEEeeccccCHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEeeCC
Q 004248 534 GDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMP 613 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey~~ 613 (766)
++|+..+.||+|+||.||+|..+++..||+|.+.......++|.+|+.++++++|||++++++++. ++..++||||++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~--~~~~~lv~e~~~ 83 (260)
T cd05070 6 ESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTMSPESFLEEAQIMKKLRHDKLVQLYAVVS--EEPIYIVTEYMS 83 (260)
T ss_pred HHhhhhheeccccCceEEEEEecCCceeEEEEecCCCCCHHHHHHHHHHHHhcCCCceEEEEeEEC--CCCcEEEEEecC
Confidence 457888999999999999999888889999999766555678999999999999999999998764 356899999999
Q ss_pred CCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcCCC
Q 004248 614 NGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGD 693 (766)
Q Consensus 614 ~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~~~ 693 (766)
+|+|.+++++... ..+++.++..++.|++.||+|||+. +|+||||||+||++++++.+||+|||++......
T Consensus 84 ~~~L~~~~~~~~~-----~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~ 155 (260)
T cd05070 84 KGSLLDFLKDGEG-----RALKLPNLVDMAAQVAAGMAYIERM---NYIHRDLRSANILVGDGLVCKIADFGLARLIEDN 155 (260)
T ss_pred CCcHHHHHHhcCC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEEeCCceEEeCCceeeeeccCc
Confidence 9999999975432 3489999999999999999999997 8999999999999999999999999999765322
Q ss_pred C----ccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCC
Q 004248 694 A----HQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLS 748 (766)
Q Consensus 694 ~----~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~ 748 (766)
. ....++..|+|||...... ++.++|||||||++|||++ |+.||..
T Consensus 156 ~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~Di~slG~~l~~l~~~g~~p~~~ 206 (260)
T cd05070 156 EYTARQGAKFPIKWTAPEAALYGR---------FTIKSDVWSFGILLTELVTKGRVPYPG 206 (260)
T ss_pred ccccccCCCCCccccChHHHhcCC---------CcchhhhHHHHHHHHHHHhcCCCCCCC
Confidence 1 1122345799999765433 5789999999999999999 8888854
No 176
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=99.98 E-value=5.2e-32 Score=286.14 Aligned_cols=195 Identities=19% Similarity=0.290 Sum_probs=162.7
Q ss_pred CCCCccceeecCCcceEEEEE-EcCCc----EEEEEEeeccccC--HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGI-LEGGI----PVVIKRIDLQSVK--TEAYLLELDFFSKVSHARLVPLLGHCMERENEKF 606 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~-~~~g~----~vavK~l~~~~~~--~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~ 606 (766)
++|+..+.||+|+||.||+|+ ..+|. .||+|.+...... .+++.+|+.+++.++||||+++++++.. ...+
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~--~~~~ 84 (279)
T cd05109 7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT--STVQ 84 (279)
T ss_pred hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC--CCcE
Confidence 468889999999999999998 44554 5899998654332 5678999999999999999999998864 4578
Q ss_pred EEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchh
Q 004248 607 LVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSE 686 (766)
Q Consensus 607 lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~ 686 (766)
+++||+++|+|.++++.+.. .+++.+++.++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+
T Consensus 85 l~~~~~~~g~l~~~l~~~~~------~~~~~~~~~~~~qi~~~L~~lH~~---~iiH~dlkp~Nil~~~~~~~kL~dfG~ 155 (279)
T cd05109 85 LVTQLMPYGCLLDYVRENKD------RIGSQDLLNWCVQIAKGMSYLEEV---RLVHRDLAARNVLVKSPNHVKITDFGL 155 (279)
T ss_pred EEEEcCCCCCHHHHHhhccC------CCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEEcCCCcEEECCCCc
Confidence 99999999999999975432 489999999999999999999997 999999999999999999999999999
Q ss_pred hhhcCCCCc-----cceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCC
Q 004248 687 VCAQGGDAH-----QSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLS 748 (766)
Q Consensus 687 a~~~~~~~~-----~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~ 748 (766)
++....... ...++..|++||...... ++.++|||||||++|||+| |+.||..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~---------~~~~~Di~slG~~l~el~t~g~~p~~~ 214 (279)
T cd05109 156 ARLLDIDETEYHADGGKVPIKWMALESILHRR---------FTHQSDVWSYGVTVWELMTFGAKPYDG 214 (279)
T ss_pred eeecccccceeecCCCccchhhCCHHHhccCC---------CCchhHHHHHHHHHHHHHcCCCCCCCC
Confidence 986532211 122356799999875443 4789999999999999998 8999854
No 177
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=99.97 E-value=7.1e-32 Score=285.52 Aligned_cols=200 Identities=19% Similarity=0.245 Sum_probs=165.8
Q ss_pred CCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC-HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEeeCC
Q 004248 536 FSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK-TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMP 613 (766)
Q Consensus 536 ~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~-~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey~~ 613 (766)
|+..+.||+|+||.||+|.. .++..+|+|.+...... .+.+.+|++++++++||||+++++++.. ++..|+||||++
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~-~~~~~~v~e~~~ 85 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYY-ENNLWILIEFCA 85 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEee-CCEEEEEEEecC
Confidence 45568899999999999995 45888999998654432 5678999999999999999999998876 568999999999
Q ss_pred CCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcCCC
Q 004248 614 NGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGD 693 (766)
Q Consensus 614 ~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~~~ 693 (766)
+|+|.+++.+.. ..++|..+..++.|++.||+|||+. +|+||||||+||+++.++++||+|||+++.....
T Consensus 86 ~~~l~~~~~~~~------~~l~~~~~~~~~~qi~~~L~~LH~~---~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~ 156 (282)
T cd06643 86 GGAVDAVMLELE------RPLTEPQIRVVCKQTLEALNYLHEN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRT 156 (282)
T ss_pred CCcHHHHHHhcC------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEccCCCEEEcccccccccccc
Confidence 999999886532 2489999999999999999999997 9999999999999999999999999998754221
Q ss_pred ---CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 694 ---AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 694 ---~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
.....++..|+|||........... ++.++|||||||++|||++|+.||...
T Consensus 157 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~----~~~~~Dv~slGvil~el~~g~~p~~~~ 211 (282)
T cd06643 157 IQRRDSFIGTPYWMAPEVVMCETSKDRP----YDYKADVWSLGITLIEMAQIEPPHHEL 211 (282)
T ss_pred ccccccccccccccCHhhccccCCCCCC----CCccchhhhHHHHHHHHccCCCCcccc
Confidence 2234578899999987532221111 578999999999999999999998543
No 178
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=99.97 E-value=3.8e-32 Score=286.87 Aligned_cols=204 Identities=20% Similarity=0.286 Sum_probs=165.6
Q ss_pred HhCCCCccceeecCCcceEEEEEEc------CCcEEEEEEeecccc--CHHHHHHHHHHHhhcCCCCcccceeEEEecCC
Q 004248 532 ATGDFSDANLIKNGHSGDLFRGILE------GGIPVVIKRIDLQSV--KTEAYLLELDFFSKVSHARLVPLLGHCMEREN 603 (766)
Q Consensus 532 ~~~~~~~~~~ig~G~~g~Vy~~~~~------~g~~vavK~l~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~ 603 (766)
.+++|+..+.||+|+||.||+|... ++..||||++..... ...+|.+|+.++++++||||+++++++.+ ++
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~-~~ 82 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQ-GQ 82 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcC-CC
Confidence 4567999999999999999999742 356899999864332 24578999999999999999999997765 56
Q ss_pred cEEEEEeeCCCCChhhhhhccCCCC---CcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEE
Q 004248 604 EKFLVYKYMPNGDLSSSLYRKTNTE---DDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVR 680 (766)
Q Consensus 604 ~~~lV~Ey~~~GsL~~~l~~~~~~~---~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~k 680 (766)
..++||||+++|+|.+++++..... .....++|.++..++.|++.||+|||+. +++||||||+||++++++.+|
T Consensus 83 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~vH~dlkp~Nil~~~~~~~~ 159 (277)
T cd05062 83 PTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVK 159 (277)
T ss_pred CeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCcchheEEEcCCCCEE
Confidence 8999999999999999997533211 1123478999999999999999999987 999999999999999999999
Q ss_pred eccchhhhhcCCCC-----ccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCC
Q 004248 681 LGSLSEVCAQGGDA-----HQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLS 748 (766)
Q Consensus 681 l~DFG~a~~~~~~~-----~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~ 748 (766)
|+|||+++...... ....++..|+|||.+.... ++.++|||||||++|||+| |+.||..
T Consensus 160 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~Di~slG~~l~el~~~~~~p~~~ 224 (277)
T cd05062 160 IGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGV---------FTTYSDVWSFGVVLWEIATLAEQPYQG 224 (277)
T ss_pred ECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCC---------cCchhHHHHHHHHHHHHHcCCCCCCCC
Confidence 99999987553221 1123456799999876543 4789999999999999999 6888853
No 179
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=99.97 E-value=6.7e-32 Score=283.08 Aligned_cols=200 Identities=19% Similarity=0.259 Sum_probs=167.5
Q ss_pred CCCCccceeecCCcceEEEEE-EcCCcEEEEEEeecccc----CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGI-LEGGIPVVIKRIDLQSV----KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLV 608 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~-~~~g~~vavK~l~~~~~----~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV 608 (766)
++|+..++||+|+||.||+|+ ..+++.||||.+..... ....+.+|++++++++||||+++++++.. .+..++|
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~~v 80 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIE-DNELNIV 80 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEE-CCeEEEE
Confidence 578889999999999999999 45789999998864322 14568999999999999999999997765 5689999
Q ss_pred EeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhh
Q 004248 609 YKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVC 688 (766)
Q Consensus 609 ~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~ 688 (766)
+||+++|+|.+++..... ....+++.+...++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 81 ~e~~~~~~L~~~~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~nil~~~~~~~~l~d~g~~~ 154 (267)
T cd08228 81 LELADAGDLSQMIKYFKK---QKRLIPERTVWKYFVQLCSAVEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGR 154 (267)
T ss_pred EEecCCCcHHHHHHHhhh---ccCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCCHHHEEEcCCCCEEECccccce
Confidence 999999999998864221 113488999999999999999999997 99999999999999999999999999987
Q ss_pred hcCCC---CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 689 AQGGD---AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 689 ~~~~~---~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
..... .....++..|+|||...... .+.++|||||||++|||+||+.||...
T Consensus 155 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~---------~~~~~Di~slG~~l~el~~g~~p~~~~ 209 (267)
T cd08228 155 FFSSKTTAAHSLVGTPYYMSPERIHENG---------YNFKSDIWSLGCLLYEMAALQSPFYGD 209 (267)
T ss_pred eccchhHHHhcCCCCccccChhhhccCC---------CCchhhHHHHHHHHHHHhcCCCCCccc
Confidence 65322 12335678899999875433 467899999999999999999998644
No 180
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=99.97 E-value=1e-31 Score=281.66 Aligned_cols=197 Identities=19% Similarity=0.306 Sum_probs=165.2
Q ss_pred CCCCccceeecCCcceEEEEEEc----CCcEEEEEEeeccccC--HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGILE----GGIPVVIKRIDLQSVK--TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFL 607 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~~----~g~~vavK~l~~~~~~--~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~l 607 (766)
++|+..+.||+|+||.||+|... +...||||.++..... .++|.+|+.++++++||||+++++++.. .+..++
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~i 82 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTK-SRPVMI 82 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEec-CCceEE
Confidence 56888999999999999999863 2468999998654332 4579999999999999999999997765 567999
Q ss_pred EEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhh
Q 004248 608 VYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEV 687 (766)
Q Consensus 608 V~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a 687 (766)
||||+++|+|.+++..... .++|.++.+++.|++.|++|||+. +|+||||||+||++++++.+||+|||++
T Consensus 83 v~e~~~~~~L~~~~~~~~~------~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~di~p~nili~~~~~~~l~dfg~~ 153 (266)
T cd05033 83 ITEYMENGSLDKFLRENDG------KFTVGQLVGMLRGIASGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLS 153 (266)
T ss_pred EEEcCCCCCHHHHHHhccC------CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCCEEECccchh
Confidence 9999999999999975432 489999999999999999999997 9999999999999999999999999999
Q ss_pred hhcCCCCc-----cceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCCC
Q 004248 688 CAQGGDAH-----QSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLSS 749 (766)
Q Consensus 688 ~~~~~~~~-----~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~~ 749 (766)
+....... ...++..|+|||...... ++.++|||||||++|||++ |+.||...
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~---------~~~~~Dv~slG~~l~~l~~~g~~p~~~~ 212 (266)
T cd05033 154 RRLEDSEATYTTKGGKIPIRWTAPEAIAYRK---------FTSASDVWSFGIVMWEVMSYGERPYWDM 212 (266)
T ss_pred hcccccccceeccCCCCCccccChhhhccCC---------CccccchHHHHHHHHHHHccCCCCCCCC
Confidence 87642111 122345799999876443 4789999999999999998 99998543
No 181
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=99.97 E-value=4.3e-32 Score=285.07 Aligned_cols=202 Identities=20% Similarity=0.271 Sum_probs=157.9
Q ss_pred ceeecCCcceEEEEEEcC---CcEEEEEEeeccccC--HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEeeCCC
Q 004248 540 NLIKNGHSGDLFRGILEG---GIPVVIKRIDLQSVK--TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPN 614 (766)
Q Consensus 540 ~~ig~G~~g~Vy~~~~~~---g~~vavK~l~~~~~~--~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey~~~ 614 (766)
+.||+|+||+||+|...+ ...+|+|.+...... ...|.+|+++++.++||||+++++++.. ....++||||+++
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~-~~~~~lv~e~~~~ 79 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIE-SIPYLLVLEFCPL 79 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECC-CCceEEEEEeCCC
Confidence 368999999999997433 457889987543322 4578999999999999999999998765 5679999999999
Q ss_pred CChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcCCC-
Q 004248 615 GDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGD- 693 (766)
Q Consensus 615 GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~~~- 693 (766)
|+|.+++...... .....++.....++.|++.||+|||+. +|+||||||+||++++++++||+|||+++.....
T Consensus 80 g~L~~~l~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~ 154 (269)
T cd05042 80 GDLKNYLRSNRGM--VAQMAQKDVLQRMACEVASGLLWLHQA---DFIHSDLALRNCQLTADLSVKIGDYGLALEQYPED 154 (269)
T ss_pred CcHHHHHHhcccc--ccccccHHHHHHHHHHHHHHHHHHHhc---CEecccccHhheEecCCCcEEEeccccccccccch
Confidence 9999999765421 112357888899999999999999997 9999999999999999999999999998654211
Q ss_pred ----CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCCC
Q 004248 694 ----AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLSS 749 (766)
Q Consensus 694 ----~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~~ 749 (766)
.....++..|+|||.......+. +...++.++|||||||++|||++ |+.||...
T Consensus 155 ~~~~~~~~~~~~~y~aPE~~~~~~~~~--~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~ 213 (269)
T cd05042 155 YYITKDCHAVPLRWLAPELVEIRGQDL--LPKDQTKKSNIWSLGVTMWELFTAADQPYPDL 213 (269)
T ss_pred heeccCCCCCcccccCHHHHhhccccc--cccccchhhHHHHHHHHHHHHHhCCCCCCCcC
Confidence 11223456799999764322110 11125789999999999999999 78887543
No 182
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=99.97 E-value=9.2e-32 Score=286.23 Aligned_cols=201 Identities=18% Similarity=0.225 Sum_probs=167.7
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC-HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEee
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK-TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKY 611 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~-~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey 611 (766)
+.|+..++||+|+||.||+|+. .+++.||+|.+...... .+++.+|++++++++||||+++++.+.. ++..++||||
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~ 90 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYW-DGKLWIMIEF 90 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEe-CCeEEEEEec
Confidence 4577889999999999999995 45899999998754433 5678999999999999999999997765 5689999999
Q ss_pred CCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcC
Q 004248 612 MPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQG 691 (766)
Q Consensus 612 ~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~ 691 (766)
+++|+|..++.+... .+++..+..++.|++.|++|||+. +|+||||||+||+++.++++||+|||++....
T Consensus 91 ~~~~~l~~~~~~~~~------~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~ 161 (292)
T cd06644 91 CPGGAVDAIMLELDR------GLTEPQIQVICRQMLEALQYLHSM---KIIHRDLKAGNVLLTLDGDIKLADFGVSAKNV 161 (292)
T ss_pred CCCCcHHHHHHhhcC------CCCHHHHHHHHHHHHHHHHHHhcC---CeeecCCCcceEEEcCCCCEEEccCccceecc
Confidence 999999988765332 489999999999999999999997 99999999999999999999999999987542
Q ss_pred CC---CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 692 GD---AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 692 ~~---~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
.. .....++..|+|||.+......... ++.++|||||||++|||+||+.||..
T Consensus 162 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~----~~~~~Dv~slG~il~el~~g~~p~~~ 217 (292)
T cd06644 162 KTLQRRDSFIGTPYWMAPEVVMCETMKDTP----YDYKADIWSLGITLIEMAQIEPPHHE 217 (292)
T ss_pred ccccccceecCCccccCceeeccccccCCC----CCchhhhHhHHHHHHHHhcCCCCCcc
Confidence 21 2234567889999987543221111 57899999999999999999999854
No 183
>PHA03207 serine/threonine kinase US3; Provisional
Probab=99.97 E-value=3.4e-32 Score=301.80 Aligned_cols=193 Identities=20% Similarity=0.240 Sum_probs=163.3
Q ss_pred hCCCCccceeecCCcceEEEEEEc---CCcEEEEEEeeccccCHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEE
Q 004248 533 TGDFSDANLIKNGHSGDLFRGILE---GGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVY 609 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~~~---~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~ 609 (766)
..+|...+.||+|+||.||+|... .++.||||.+... +.+.+|++++++++|||||++++++.. ++..++||
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~----~~~~~E~~il~~l~h~~iv~~~~~~~~-~~~~~lv~ 165 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG----KTPGREIDILKTISHRAIINLIHAYRW-KSTVCMVM 165 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc----ccHHHHHHHHHhcCCCCccceeeeEee-CCEEEEEe
Confidence 356999999999999999999743 4678999988543 345689999999999999999997765 56899999
Q ss_pred eeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhh
Q 004248 610 KYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCA 689 (766)
Q Consensus 610 Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~ 689 (766)
||+. ++|.+++.... .++|.+++.++.|++.||+|||+. +||||||||+|||++.++.+||+|||+++.
T Consensus 166 e~~~-~~l~~~l~~~~-------~l~~~~~~~i~~ql~~aL~~LH~~---givHrDlkp~Nill~~~~~~~l~DfG~a~~ 234 (392)
T PHA03207 166 PKYK-CDLFTYVDRSG-------PLPLEQAITIQRRLLEALAYLHGR---GIIHRDVKTENIFLDEPENAVLGDFGAACK 234 (392)
T ss_pred hhcC-CCHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEccCccccc
Confidence 9996 68999885432 489999999999999999999997 999999999999999999999999999976
Q ss_pred cCCC-----CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCCc
Q 004248 690 QGGD-----AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSSR 750 (766)
Q Consensus 690 ~~~~-----~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~~ 750 (766)
.... .....||..|+|||.+.... ++.++|||||||++|||++|+.||....
T Consensus 235 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---------~~~~~DvwslGvil~el~~g~~pf~~~~ 291 (392)
T PHA03207 235 LDAHPDTPQCYGWSGTLETNSPELLALDP---------YCAKTDIWSAGLVLFEMSVKNVTLFGKQ 291 (392)
T ss_pred cCcccccccccccccccCccCHhHhcCCC---------CCchhhHHHHHHHHHHHHHCCCCCCCCC
Confidence 5322 12346899999999886544 4679999999999999999999996543
No 184
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=99.97 E-value=6.7e-32 Score=286.77 Aligned_cols=204 Identities=20% Similarity=0.295 Sum_probs=166.5
Q ss_pred CCCCccceeecCCcceEEEEEE------cCCcEEEEEEeeccccC-HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL------EGGIPVVIKRIDLQSVK-TEAYLLELDFFSKVSHARLVPLLGHCMERENEKF 606 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~------~~g~~vavK~l~~~~~~-~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~ 606 (766)
.+|...+.||+|+||+||++.. .++..+|+|.+...... .+.+.+|++++++++||||+++++++.. .+..+
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~ 83 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVE-GDPLI 83 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CCccE
Confidence 4577889999999999999984 23567999998654332 5679999999999999999999998765 56899
Q ss_pred EEEeeCCCCChhhhhhccCCC------CCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEE
Q 004248 607 LVYKYMPNGDLSSSLYRKTNT------EDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVR 680 (766)
Q Consensus 607 lV~Ey~~~GsL~~~l~~~~~~------~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~k 680 (766)
+||||+++|+|.+++...... ......++|.++..++.|++.||+|||+. +|+||||||+||++++++.+|
T Consensus 84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~---~i~H~dlkp~Nili~~~~~~k 160 (288)
T cd05093 84 MVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVK 160 (288)
T ss_pred EEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccCCcEE
Confidence 999999999999999754310 01123589999999999999999999997 999999999999999999999
Q ss_pred eccchhhhhcCCCC-----ccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCCCc
Q 004248 681 LGSLSEVCAQGGDA-----HQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLSSR 750 (766)
Q Consensus 681 l~DFG~a~~~~~~~-----~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~~~ 750 (766)
|+|||+++...... ....++..|+|||...... ++.++|||||||++|||+| |+.||....
T Consensus 161 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~sDiwslG~il~~l~t~g~~p~~~~~ 227 (288)
T cd05093 161 IGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRK---------FTTESDVWSLGVVLWEIFTYGKQPWYQLS 227 (288)
T ss_pred eccCCccccccCCceeecCCCCCccccccCHHHhccCC---------CCchhhHHHHHHHHHHHHhCCCCCCCCCC
Confidence 99999997653221 1223456799999875443 4789999999999999999 899985443
No 185
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.97 E-value=8.2e-33 Score=294.37 Aligned_cols=203 Identities=19% Similarity=0.316 Sum_probs=172.4
Q ss_pred HHHHHHhCCCCccceeecCCcceEEEEEEc-CCcEEEEEEeeccccCHHHHHHHHHHHhhcCCCCcccceeEEEecCCcE
Q 004248 527 QQLLAATGDFSDANLIKNGHSGDLFRGILE-GGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEK 605 (766)
Q Consensus 527 ~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 605 (766)
++++....+....+++|-|.||.||.|+|+ -.-.||||.++.+.+..++|+.|+.+|+.++|||+|+|+|+|.. +...
T Consensus 260 DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMeveEFLkEAAvMKeikHpNLVqLLGVCT~-EpPF 338 (1157)
T KOG4278|consen 260 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTH-EPPF 338 (1157)
T ss_pred chhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcchhHHHHHHHHHHHHhhcCccHHHHhhhhcc-CCCe
Confidence 444444455667789999999999999965 46799999999888889999999999999999999999999976 5689
Q ss_pred EEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccch
Q 004248 606 FLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLS 685 (766)
Q Consensus 606 ~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG 685 (766)
|||.|||..|+|.++|++... ..++--..+.+|.||+.||+||..+ .+|||||.++|+|+.++..+||+|||
T Consensus 339 YIiTEfM~yGNLLdYLRecnr-----~ev~avvLlyMAtQIsSaMeYLEkk---nFIHRDLAARNCLVgEnhiVKvADFG 410 (1157)
T KOG4278|consen 339 YIITEFMCYGNLLDYLRECNR-----SEVPAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHIVKVADFG 410 (1157)
T ss_pred EEEEecccCccHHHHHHHhch-----hhcchhHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhccccccceEEeeccc
Confidence 999999999999999987543 3356666788999999999999988 89999999999999999999999999
Q ss_pred hhhhcCCC-Cccceee---ecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCC
Q 004248 686 EVCAQGGD-AHQSRIT---RLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNL 747 (766)
Q Consensus 686 ~a~~~~~~-~~~~~~t---~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~ 747 (766)
+++...++ .+...|. .-|.|||.+...+ ++.|+|||+|||+|||++| |..|+-
T Consensus 411 LsRlMtgDTYTAHAGAKFPIKWTAPEsLAyNt---------FSiKSDVWAFGVLLWEIATYGMsPYP 468 (1157)
T KOG4278|consen 411 LSRLMTGDTYTAHAGAKFPIKWTAPESLAYNT---------FSIKSDVWAFGVLLWEIATYGMSPYP 468 (1157)
T ss_pred hhhhhcCCceecccCccCcccccCcccccccc---------cccchhhHHHHHHHHHHHhcCCCCCC
Confidence 99988444 3333332 3478999876544 6789999999999999998 888883
No 186
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=99.97 E-value=7.9e-32 Score=290.16 Aligned_cols=197 Identities=14% Similarity=0.216 Sum_probs=158.5
Q ss_pred cceeecCCcceEEEEEEc---CCcEEEEEEeeccccCHHHHHHHHHHHhhcCCCCcccceeEEEe-cCCcEEEEEeeCCC
Q 004248 539 ANLIKNGHSGDLFRGILE---GGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCME-RENEKFLVYKYMPN 614 (766)
Q Consensus 539 ~~~ig~G~~g~Vy~~~~~---~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~-~~~~~~lV~Ey~~~ 614 (766)
..+||+|+||.||+|+.. ++..||+|.+.... ....+.+|++++++++|||||++++++.. .+...++||||+++
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~ 84 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG-ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAEH 84 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC-CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeCC
Confidence 368999999999999854 45789999986443 23468899999999999999999997754 23568999999974
Q ss_pred CChhhhhhccCCC--CCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeee----CCCCcEEeccchhhh
Q 004248 615 GDLSSSLYRKTNT--EDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILL----DDKFEVRLGSLSEVC 688 (766)
Q Consensus 615 GsL~~~l~~~~~~--~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl----~~~~~~kl~DFG~a~ 688 (766)
+|.+++...... ......+++..+..++.|++.||+|||+. +|+||||||+||++ ++++.+||+|||+++
T Consensus 85 -~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~ 160 (317)
T cd07867 85 -DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMGFAR 160 (317)
T ss_pred -cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEccCCCCCCcEEEeecccee
Confidence 888887532211 11123589999999999999999999997 99999999999999 566899999999998
Q ss_pred hcCCC------CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 689 AQGGD------AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 689 ~~~~~------~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
..... .....+|..|+|||.+..... ++.++|||||||++|||+||+.||..
T Consensus 161 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~--------~~~~~DiwSlG~il~el~tg~~~f~~ 218 (317)
T cd07867 161 LFNSPLKPLADLDPVVVTFWYRAPELLLGARH--------YTKAIDIWAIGCIFAELLTSEPIFHC 218 (317)
T ss_pred ccCCCcccccccCcceecccccCcHHhcCCCc--------cCcHHHHHhHHHHHHHHHhCCCCccc
Confidence 65322 233467889999998754321 47899999999999999999999853
No 187
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=99.97 E-value=4.9e-32 Score=286.08 Aligned_cols=204 Identities=20% Similarity=0.284 Sum_probs=165.8
Q ss_pred hCCCCccceeecCCcceEEEEEEc------CCcEEEEEEeeccccC--HHHHHHHHHHHhhcCCCCcccceeEEEecCCc
Q 004248 533 TGDFSDANLIKNGHSGDLFRGILE------GGIPVVIKRIDLQSVK--TEAYLLELDFFSKVSHARLVPLLGHCMERENE 604 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~--~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 604 (766)
+++|...+.||+|+||.||+|... .+..||+|.+...... ...|.+|+.++++++|+||+++++++.+ .+.
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~ 83 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFE-RLP 83 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEcc-CCC
Confidence 456888999999999999999854 4678999988643322 4579999999999999999999998776 457
Q ss_pred EEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCC---cEEe
Q 004248 605 KFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKF---EVRL 681 (766)
Q Consensus 605 ~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~---~~kl 681 (766)
.++||||+++|+|.+++++.+........++|.++..++.||+.||+|||+. +++||||||+||+++.++ .+||
T Consensus 84 ~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~nil~~~~~~~~~~kl 160 (277)
T cd05036 84 RFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEEN---HFIHRDIAARNCLLTCKGPGRVAKI 160 (277)
T ss_pred cEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchheEEEeccCCCcceEe
Confidence 8999999999999999976543222223589999999999999999999997 899999999999998765 5999
Q ss_pred ccchhhhhcCCCCc-----cceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCCC
Q 004248 682 GSLSEVCAQGGDAH-----QSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLSS 749 (766)
Q Consensus 682 ~DFG~a~~~~~~~~-----~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~~ 749 (766)
+|||+++....... ....+..|+|||...... ++.++|||||||++|||++ |+.||...
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~DiwslG~il~el~~~g~~pf~~~ 225 (277)
T cd05036 161 ADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGI---------FTSKTDVWSFGVLLWEIFSLGYMPYPGR 225 (277)
T ss_pred ccCccccccCCccceecCCCCCccHhhCCHHHHhcCC---------cCchhHHHHHHHHHHHHHcCCCCCCCCC
Confidence 99999986532211 112235699999875443 5789999999999999997 99998543
No 188
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=99.97 E-value=8.7e-32 Score=282.09 Aligned_cols=196 Identities=19% Similarity=0.254 Sum_probs=164.2
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeecccc------CHHHHHHHHHHHhhcCCCCcccceeEEEec-CCcE
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV------KTEAYLLELDFFSKVSHARLVPLLGHCMER-ENEK 605 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~------~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-~~~~ 605 (766)
.+|+..+.||+|+||.||+|.. .+|+.||||.+..... ..+.+.+|++++++++||||+++++++.+. ....
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 4688899999999999999985 5689999999864321 134788999999999999999999976543 2457
Q ss_pred EEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccch
Q 004248 606 FLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLS 685 (766)
Q Consensus 606 ~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG 685 (766)
++||||+++|+|.+++.+.. .+++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 82 ~~v~e~~~~~~L~~~l~~~~-------~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~Dfg 151 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSYG-------ALTENVTRKYTRQILEGVSYLHSN---MIVHRDIKGANILRDSVGNVKLGDFG 151 (265)
T ss_pred EEEEEecCCCcHHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEecCCCCEEECcCc
Confidence 89999999999999987543 278888999999999999999997 89999999999999999999999999
Q ss_pred hhhhcCC------CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 686 EVCAQGG------DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 686 ~a~~~~~------~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
+++.... ......++..|+|||...... ++.++|||||||++|||++|+.||..
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~Dv~slG~il~el~~g~~p~~~ 211 (265)
T cd06652 152 ASKRLQTICLSGTGMKSVTGTPYWMSPEVISGEG---------YGRKADIWSVGCTVVEMLTEKPPWAE 211 (265)
T ss_pred cccccccccccccccccCCCCccccChhhhcCCC---------CCcchhHHHHHHHHHHHhhCCCCCCc
Confidence 9875421 122345788999999875433 46899999999999999999999853
No 189
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=99.97 E-value=8e-32 Score=280.05 Aligned_cols=190 Identities=21% Similarity=0.337 Sum_probs=158.5
Q ss_pred ceeecCCcceEEEEEE-cCCcEEEEEEeecccc--CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEeeCCCCC
Q 004248 540 NLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV--KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGD 616 (766)
Q Consensus 540 ~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey~~~Gs 616 (766)
+.||+|+||.||+|+. .+++.||+|.+..... ....|.+|++++++++||||++++++|.. .+..++||||+++|+
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~~~~~ 79 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQ-KQPIYIVMELVQGGD 79 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCeEEEEeeccCCc
Confidence 4699999999999995 5789999998764322 24679999999999999999999998766 567999999999999
Q ss_pred hhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcCCCCcc
Q 004248 617 LSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQ 696 (766)
Q Consensus 617 L~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~~~~~~ 696 (766)
|.+++.+.. ..++|.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 80 L~~~~~~~~------~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~ 150 (252)
T cd05084 80 FLTFLRTEG------PRLKVKELIQMVENAAAGMEYLESK---HCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYA 150 (252)
T ss_pred HHHHHHhCC------CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEEcCCCcEEECccccCccccccccc
Confidence 999997543 2489999999999999999999987 9999999999999999999999999998764322111
Q ss_pred -----ceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCC
Q 004248 697 -----SRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLS 748 (766)
Q Consensus 697 -----~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~ 748 (766)
...+..|+|||.+..+. ++.++|||||||++|||++ |+.||..
T Consensus 151 ~~~~~~~~~~~y~aPE~~~~~~---------~~~~~Dv~slG~il~e~~~~~~~p~~~ 199 (252)
T cd05084 151 STGGMKQIPVKWTAPEALNYGR---------YSSESDVWSFGILLWEAFSLGAVPYAN 199 (252)
T ss_pred ccCCCCCCceeecCchhhcCCC---------CChHHHHHHHHHHHHHHHhCCCCCccc
Confidence 11234699999875544 4679999999999999998 8888853
No 190
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=99.97 E-value=9.7e-32 Score=280.14 Aligned_cols=197 Identities=21% Similarity=0.360 Sum_probs=168.8
Q ss_pred CCCCccceeecCCcceEEEEEEcCCcEEEEEEeeccccCHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEeeCC
Q 004248 534 GDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMP 613 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey~~ 613 (766)
++|+..+.||+|+||.||+|... |+.||||.++......+++.+|+.++++++|+||+++++++.. ++..++||||++
T Consensus 6 ~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~~v~e~~~ 83 (256)
T cd05039 6 KELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDSTAAQAFLAEASVMTTLRHPNLVQLLGVVLQ-GNPLYIVTEYMA 83 (256)
T ss_pred hhccceeeeecCCCceEEEEEec-CcEEEEEEeccchhHHHHHHHHHHHHHhcCCcceeeeEEEEcC-CCCeEEEEEecC
Confidence 46888899999999999999865 7889999997655446689999999999999999999998775 568999999999
Q ss_pred CCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcCCC
Q 004248 614 NGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGD 693 (766)
Q Consensus 614 ~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~~~ 693 (766)
+|+|.+++..... ..++|..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||.++.....
T Consensus 84 ~~~L~~~~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~ 155 (256)
T cd05039 84 KGSLVDYLRSRGR-----AVITLAQQLGFALDVCEGMEYLEEK---NFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQG 155 (256)
T ss_pred CCcHHHHHHhcCC-----CCCCHHHHHHHHHHHHHHHHHHHhC---CccchhcccceEEEeCCCCEEEcccccccccccc
Confidence 9999999976432 2489999999999999999999998 9999999999999999999999999999876433
Q ss_pred CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCCC
Q 004248 694 AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLSS 749 (766)
Q Consensus 694 ~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~~ 749 (766)
......+..|+|||....+. ++.++|||||||++|||++ |+.||...
T Consensus 156 ~~~~~~~~~~~ape~~~~~~---------~~~~~Di~slG~il~~l~~~g~~p~~~~ 203 (256)
T cd05039 156 QDSGKLPVKWTAPEALREKK---------FSTKSDVWSFGILLWEIYSFGRVPYPRI 203 (256)
T ss_pred cccCCCcccccCchhhcCCc---------CCcHHHHHHHHHHHHHHHhcCCCCCCCC
Confidence 33333456799999875443 4679999999999999997 99998544
No 191
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=1.7e-32 Score=293.00 Aligned_cols=213 Identities=19% Similarity=0.224 Sum_probs=175.5
Q ss_pred cHHHHHHHhCC---CCccceeecCCcceEEEEE-EcCCcEEEEEEeeccccC----HHHHHHHHHHHhhcCCCCccccee
Q 004248 525 TYQQLLAATGD---FSDANLIKNGHSGDLFRGI-LEGGIPVVIKRIDLQSVK----TEAYLLELDFFSKVSHARLVPLLG 596 (766)
Q Consensus 525 ~~~~l~~~~~~---~~~~~~ig~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~----~~~~~~E~~~l~~l~H~niv~l~~ 596 (766)
.|-.|.++.-+ |..++.||-|+||+|..+. .++...+|+|.+++...- ......|-.||+....+.||+||.
T Consensus 617 nYiRLkRaKMdKSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyy 696 (1034)
T KOG0608|consen 617 NYIRLKRAKMDKSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYY 696 (1034)
T ss_pred hHHHHHHhhccccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEE
Confidence 34455555443 7788999999999999997 566788999999765432 335788999999999999999996
Q ss_pred EEEecCCcEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCC
Q 004248 597 HCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDK 676 (766)
Q Consensus 597 ~~~~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~ 676 (766)
.| ++.+.+|+||||++|||+.++|-+.+- +.+.-...|+.++..|+++.|.. ++|||||||.|||||.+
T Consensus 697 SF-QDkdnLYFVMdYIPGGDmMSLLIrmgI-------FeE~LARFYIAEltcAiesVHkm---GFIHRDiKPDNILIDrd 765 (1034)
T KOG0608|consen 697 SF-QDKDNLYFVMDYIPGGDMMSLLIRMGI-------FEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRD 765 (1034)
T ss_pred Ee-ccCCceEEEEeccCCccHHHHHHHhcc-------CHHHHHHHHHHHHHHHHHHHHhc---cceecccCccceEEccC
Confidence 44 446789999999999999999987654 77777888999999999999997 99999999999999999
Q ss_pred CcEEeccchhhhhcC----------C-----------------------------------CCccceeeecccCCCCCCC
Q 004248 677 FEVRLGSLSEVCAQG----------G-----------------------------------DAHQSRITRLLRLPQSSEQ 711 (766)
Q Consensus 677 ~~~kl~DFG~a~~~~----------~-----------------------------------~~~~~~~t~~y~aPe~~~~ 711 (766)
|++||+|||++.... + ..+..+||..|+|||++..
T Consensus 766 GHIKLTDFGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r 845 (1034)
T KOG0608|consen 766 GHIKLTDFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLAR 845 (1034)
T ss_pred CceeeeeccccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcc
Confidence 999999999986320 0 0112478999999999876
Q ss_pred CceeeeeeeeecccccceecchHHHHHHhcCCCCCCCCccccccce
Q 004248 712 GSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSSRFGVKQQT 757 (766)
Q Consensus 712 ~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~~~~~~~~~ 757 (766)
.. ++..||+||.|||||||+.|+.||....++..|..
T Consensus 846 ~g---------~~q~cdwws~gvil~em~~g~~pf~~~tp~~tq~k 882 (1034)
T KOG0608|consen 846 TG---------YTQLCDWWSVGVILYEMLVGQPPFLADTPGETQYK 882 (1034)
T ss_pred cC---------ccccchhhHhhHHHHHHhhCCCCccCCCCCcceee
Confidence 54 48899999999999999999999987777765543
No 192
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=99.97 E-value=6e-32 Score=292.65 Aligned_cols=195 Identities=21% Similarity=0.199 Sum_probs=160.8
Q ss_pred ccceeecC--CcceEEEEE-EcCCcEEEEEEeeccccC---HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEee
Q 004248 538 DANLIKNG--HSGDLFRGI-LEGGIPVVIKRIDLQSVK---TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKY 611 (766)
Q Consensus 538 ~~~~ig~G--~~g~Vy~~~-~~~g~~vavK~l~~~~~~---~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey 611 (766)
..++||+| +||+||++. ..+|+.||||+++..... .+.+.+|+++++.++|||||++++++.. ++..++||||
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~-~~~~~lv~e~ 80 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIA-DNELWVVTSF 80 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEE-CCEEEEEEec
Confidence 35789999 678999998 467999999999764332 3467789999999999999999998876 5689999999
Q ss_pred CCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcC
Q 004248 612 MPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQG 691 (766)
Q Consensus 612 ~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~ 691 (766)
+++|+|.+++..+.. ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+|++|||.+....
T Consensus 81 ~~~~~l~~~~~~~~~-----~~l~~~~~~~i~~qi~~~L~~LH~~---~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~ 152 (327)
T cd08227 81 MAYGSAKDLICTHFM-----DGMSELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMI 152 (327)
T ss_pred cCCCcHHHHHHhhcc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCChhhEEEecCCcEEEcccchhhccc
Confidence 999999999965422 2489999999999999999999987 99999999999999999999999998654321
Q ss_pred C----------CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 692 G----------DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 692 ~----------~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
. ......++..|+|||.+.....+ ++.++|||||||++|||+||+.||..
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-------~~~~~DiwslG~il~el~~g~~pf~~ 212 (327)
T cd08227 153 NHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQG-------YDAKSDIYSVGITACELANGHVPFKD 212 (327)
T ss_pred cccccccccccccccccceecccChHHhhcccCC-------CCchhhHHHHHHHHHHHHHCCCCCCC
Confidence 0 11223456789999987543222 47899999999999999999999964
No 193
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=99.97 E-value=9.8e-32 Score=286.83 Aligned_cols=204 Identities=20% Similarity=0.334 Sum_probs=163.3
Q ss_pred CCCCccceeecCCcceEEEEEEc-CCc--EEEEEEeecccc--CHHHHHHHHHHHhhc-CCCCcccceeEEEecCCcEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGILE-GGI--PVVIKRIDLQSV--KTEAYLLELDFFSKV-SHARLVPLLGHCMERENEKFL 607 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~--~vavK~l~~~~~--~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~~l 607 (766)
++|+..++||+|+||.||+|... ++. .+|+|.++.... ..+.|.+|+++++++ +||||+++++++.. .+..|+
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~-~~~~~l 80 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACEN-RGYLYI 80 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEcc-CCcceE
Confidence 46888899999999999999864 343 578888864221 246799999999999 79999999997765 567999
Q ss_pred EEeeCCCCChhhhhhccCCCC---------CcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCc
Q 004248 608 VYKYMPNGDLSSSLYRKTNTE---------DDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFE 678 (766)
Q Consensus 608 V~Ey~~~GsL~~~l~~~~~~~---------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~ 678 (766)
||||+++|+|.+++++..... .....+++.++..++.|++.||+|||+. +|+||||||+|||+++++.
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~ 157 (297)
T cd05089 81 AIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEK---QFIHRDLAARNVLVGENLA 157 (297)
T ss_pred EEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCcCCcceEEECCCCe
Confidence 999999999999997543210 0113589999999999999999999987 9999999999999999999
Q ss_pred EEeccchhhhhcCCCCc--cceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCCCc
Q 004248 679 VRLGSLSEVCAQGGDAH--QSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLSSR 750 (766)
Q Consensus 679 ~kl~DFG~a~~~~~~~~--~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~~~ 750 (766)
+||+|||++........ ....+..|+|||...... ++.++|||||||++|||+| |+.||....
T Consensus 158 ~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~DvwSlG~il~el~t~g~~pf~~~~ 223 (297)
T cd05089 158 SKIADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSV---------YTTKSDVWSFGVLLWEIVSLGGTPYCGMT 223 (297)
T ss_pred EEECCcCCCccccceeccCCCCcCccccCchhhccCC---------CCchhhHHHHHHHHHHHHcCCCCCCCCCC
Confidence 99999999865422111 112244699999875443 4679999999999999998 999996543
No 194
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=99.97 E-value=1.1e-31 Score=282.07 Aligned_cols=202 Identities=21% Similarity=0.293 Sum_probs=160.1
Q ss_pred ceeecCCcceEEEEEEcC---CcEEEEEEeeccccC--HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEeeCCC
Q 004248 540 NLIKNGHSGDLFRGILEG---GIPVVIKRIDLQSVK--TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPN 614 (766)
Q Consensus 540 ~~ig~G~~g~Vy~~~~~~---g~~vavK~l~~~~~~--~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey~~~ 614 (766)
+.||+|+||.||+|...+ +..+|+|+++..... ...|.+|+.++++++||||+++++++.+ ....++||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e~~~~ 79 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTE-VTPYLLVMEFCPL 79 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CCCcEEEEECCCC
Confidence 368999999999998543 467999998654432 3478999999999999999999997765 4578999999999
Q ss_pred CChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcCCCC
Q 004248 615 GDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDA 694 (766)
Q Consensus 615 GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~~~~ 694 (766)
|+|.++++..... .....++..+..++.|++.|++|||+. +++||||||+||+++.++++|++|||+++......
T Consensus 80 g~L~~~l~~~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~ 154 (269)
T cd05087 80 GDLKGYLRSCRKA--ELMTPDPTTLQRMACEIALGLLHLHKN---NFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKED 154 (269)
T ss_pred CcHHHHHHHhhhc--ccccccHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEECCccccccccCcc
Confidence 9999999754321 123467888899999999999999997 99999999999999999999999999987543221
Q ss_pred -----ccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCCC
Q 004248 695 -----HQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLSS 749 (766)
Q Consensus 695 -----~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~~ 749 (766)
....++..|+|||.+...... .+...++.++|||||||++|||++ |+.||...
T Consensus 155 ~~~~~~~~~~~~~y~aPE~~~~~~~~--~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~ 213 (269)
T cd05087 155 YYVTPDQLWVPLRWIAPELVDEVHGN--LLVVDQTKESNVWSLGVTIWELFELGSQPYRHL 213 (269)
T ss_pred eeecCCCcCCcccccCHhHhcccccc--ccccCCCccchhHHHHHHHHHHHhCCCCCCCCC
Confidence 123456779999987532211 011125789999999999999996 99999543
No 195
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=99.97 E-value=3.6e-32 Score=284.11 Aligned_cols=200 Identities=19% Similarity=0.352 Sum_probs=169.8
Q ss_pred HhCCCCccceeecCCcceEEEEEEcCCcEEEEEEeecccc-CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEe
Q 004248 532 ATGDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSV-KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYK 610 (766)
Q Consensus 532 ~~~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~E 610 (766)
+..+|+..++||+|+||.||+|...+++.||+|.+..... ..+++.+|+.++++++||||+++++++.. .+..++|||
T Consensus 4 ~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~lv~e 82 (261)
T cd05148 4 PREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSV-GEPVYIITE 82 (261)
T ss_pred cHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEec-CCCeEEEEe
Confidence 4456888999999999999999987799999999976554 35679999999999999999999998765 567999999
Q ss_pred eCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhc
Q 004248 611 YMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQ 690 (766)
Q Consensus 611 y~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~ 690 (766)
|+++|+|.++++.... ..+++.++..++.|++.|++|||+. +|+||||||+||++++++.+||+|||.+...
T Consensus 83 ~~~~~~L~~~~~~~~~-----~~~~~~~~~~~~~~i~~al~~lH~~---~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~ 154 (261)
T cd05148 83 LMEKGSLLAFLRSPEG-----QVLPVASLIDMACQVAEGMAYLEEQ---NSIHRDLAARNILVGEDLVCKVADFGLARLI 154 (261)
T ss_pred ecccCCHHHHHhcCCC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccCcceEEEcCCceEEEccccchhhc
Confidence 9999999999976432 3489999999999999999999987 8999999999999999999999999999765
Q ss_pred CCCC---ccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCCC
Q 004248 691 GGDA---HQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLSS 749 (766)
Q Consensus 691 ~~~~---~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~~ 749 (766)
.... ....++..|++||...... ++.++|||||||++|||++ |+.||...
T Consensus 155 ~~~~~~~~~~~~~~~~~~PE~~~~~~---------~~~~~DiwslG~~l~~l~~~g~~p~~~~ 208 (261)
T cd05148 155 KEDVYLSSDKKIPYKWTAPEAASHGT---------FSTKSDVWSFGILLYEMFTYGQVPYPGM 208 (261)
T ss_pred CCccccccCCCCceEecCHHHHccCC---------CCchhhHHHHHHHHHHHHcCCCCCCCcC
Confidence 3221 1223456799999765433 4679999999999999998 89998543
No 196
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=99.97 E-value=7.3e-32 Score=283.13 Aligned_cols=203 Identities=20% Similarity=0.249 Sum_probs=168.5
Q ss_pred HHHHhCCCCccceeecCCcceEEEEE-EcCCcEEEEEEeeccccC-HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEE
Q 004248 529 LLAATGDFSDANLIKNGHSGDLFRGI-LEGGIPVVIKRIDLQSVK-TEAYLLELDFFSKVSHARLVPLLGHCMERENEKF 606 (766)
Q Consensus 529 l~~~~~~~~~~~~ig~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~-~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~ 606 (766)
++.+++++.....||+|+||.||+|+ ..++..||+|.+...... .+.+.+|++++++++|+||+++++++.. ++..+
T Consensus 3 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~ 81 (268)
T cd06624 3 YEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSE-NGFFK 81 (268)
T ss_pred cccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeecc-CCEEE
Confidence 34466777778899999999999999 456889999998755433 5679999999999999999999998765 56899
Q ss_pred EEEeeCCCCChhhhhhccCCCCCcCCCC--CHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCC-CCcEEecc
Q 004248 607 LVYKYMPNGDLSSSLYRKTNTEDDLQSL--DWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDD-KFEVRLGS 683 (766)
Q Consensus 607 lV~Ey~~~GsL~~~l~~~~~~~~~~~~l--~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~-~~~~kl~D 683 (766)
+|+||+++++|.++++.+.. .+ ++.++..++.|++.||+|||+. +|+||||||+||+++. ++.+||+|
T Consensus 82 lv~e~~~~~~L~~~l~~~~~------~~~~~~~~~~~~~~qi~~al~~lH~~---~i~h~dl~p~nil~~~~~~~~~l~d 152 (268)
T cd06624 82 IFMEQVPGGSLSALLRSKWG------PLKDNEQTIIFYTKQILEGLKYLHDN---QIVHRDIKGDNVLVNTYSGVVKISD 152 (268)
T ss_pred EEEecCCCCCHHHHHHHhcc------cCCCcHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCeEEEec
Confidence 99999999999999975422 24 7888899999999999999987 9999999999999986 67999999
Q ss_pred chhhhhcCCC---CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 684 LSEVCAQGGD---AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 684 FG~a~~~~~~---~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
||.+...... .....++..|+|||.......+ ++.++|||||||++|||++|+.||..
T Consensus 153 fg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~-------~~~~~Dv~slGvvl~~l~~g~~p~~~ 213 (268)
T cd06624 153 FGTSKRLAGINPCTETFTGTLQYMAPEVIDKGPRG-------YGAPADIWSLGCTIVEMATGKPPFIE 213 (268)
T ss_pred chhheecccCCCccccCCCCccccChhhhcccccc-------CCchhhhHHHHHHHHHHHhCCCCCcc
Confidence 9998765321 2223467889999987544322 46899999999999999999999854
No 197
>PHA03211 serine/threonine kinase US3; Provisional
Probab=99.97 E-value=4.6e-32 Score=303.82 Aligned_cols=191 Identities=19% Similarity=0.236 Sum_probs=162.0
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccCHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEeeC
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYM 612 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey~ 612 (766)
..|...+.||+|+||.||+|.. .+++.||||... ...+.+|++++++++|||||++++++.. ++..++||||+
T Consensus 169 ~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~-----~~~~~~E~~iL~~L~HpnIv~l~~~~~~-~~~~~lv~e~~ 242 (461)
T PHA03211 169 LGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW-----YASSVHEARLLRRLSHPAVLALLDVRVV-GGLTCLVLPKY 242 (461)
T ss_pred CCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc-----ccCHHHHHHHHHHCCCCCCCcEEEEEEE-CCEEEEEEEcc
Confidence 3588889999999999999995 458899999642 2346789999999999999999998776 56789999999
Q ss_pred CCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcCC
Q 004248 613 PNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGG 692 (766)
Q Consensus 613 ~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~~ 692 (766)
. |+|.+++.... ..++|.+++.|+.|+++||+|||+. +||||||||+|||++.++.+||+|||+++....
T Consensus 243 ~-~~L~~~l~~~~------~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~ 312 (461)
T PHA03211 243 R-SDLYTYLGARL------RPLGLAQVTAVARQLLSAIDYIHGE---GIIHRDIKTENVLVNGPEDICLGDFGAACFARG 312 (461)
T ss_pred C-CCHHHHHHhcC------CCCCHHHHHHHHHHHHHHHHHHHHC---CEEECcCCHHHEEECCCCCEEEcccCCceeccc
Confidence 5 79999886533 2489999999999999999999998 999999999999999999999999999976532
Q ss_pred C-----CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 693 D-----AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 693 ~-----~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
. .....||..|+|||.+.... ++.++|||||||++|||++|..|++..
T Consensus 313 ~~~~~~~~~~~GT~~Y~APE~~~~~~---------~~~~sDvwSlGviL~El~~g~~~lf~~ 365 (461)
T PHA03211 313 SWSTPFHYGIAGTVDTNAPEVLAGDP---------YTPSVDIWSAGLVIFEAAVHTASLFSA 365 (461)
T ss_pred ccccccccccCCCcCCcCHHHHcCCC---------CCchHHHHHHHHHHHHHHHcCCCcccC
Confidence 2 12345899999999886544 478999999999999999998776543
No 198
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=99.97 E-value=8.8e-32 Score=281.29 Aligned_cols=196 Identities=20% Similarity=0.333 Sum_probs=165.4
Q ss_pred CCCCccceeecCCcceEEEEEEcCCcEEEEEEeeccccCHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEeeCC
Q 004248 534 GDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMP 613 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey~~ 613 (766)
++|...+.||+|+||.||+|...++..||+|++.......+.|.+|++++++++|||++++++++. ++..++||||++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~--~~~~~~v~e~~~ 83 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTMMPEAFLQEAQIMKKLRHDKLVPLYAVVS--EEPIYIVTEFMG 83 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCCccHHHHHHHHHHHHhCCCCCeeeEEEEEc--CCCcEEEEEcCC
Confidence 357778899999999999999877778999998765555678999999999999999999998663 356899999999
Q ss_pred CCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcCCC
Q 004248 614 NGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGD 693 (766)
Q Consensus 614 ~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~~~ 693 (766)
+|+|.+++++... ..++|..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.....
T Consensus 84 ~~~L~~~~~~~~~-----~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~ 155 (260)
T cd05069 84 KGSLLDFLKEGDG-----KYLKLPQLVDMAAQIADGMAYIERM---NYIHRDLRAANILVGDNLVCKIADFGLARLIEDN 155 (260)
T ss_pred CCCHHHHHhhCCC-----CCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCeEEECCCccceEccCC
Confidence 9999999975432 3489999999999999999999987 8999999999999999999999999999765322
Q ss_pred C----ccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCC
Q 004248 694 A----HQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLS 748 (766)
Q Consensus 694 ~----~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~ 748 (766)
. ....++..|+|||...... ++.++|||||||++|||+| |+.||..
T Consensus 156 ~~~~~~~~~~~~~y~~Pe~~~~~~---------~~~~~Di~slG~~l~el~t~g~~p~~~ 206 (260)
T cd05069 156 EYTARQGAKFPIKWTAPEAALYGR---------FTIKSDVWSFGILLTELVTKGRVPYPG 206 (260)
T ss_pred cccccCCCccchhhCCHHHhccCC---------cChHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 1 1223456799999765433 4789999999999999999 8999854
No 199
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=99.97 E-value=7.3e-32 Score=288.72 Aligned_cols=202 Identities=21% Similarity=0.356 Sum_probs=162.1
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCc--EEEEEEeecccc--CHHHHHHHHHHHhhc-CCCCcccceeEEEecCCcEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGI--PVVIKRIDLQSV--KTEAYLLELDFFSKV-SHARLVPLLGHCMERENEKFL 607 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~--~vavK~l~~~~~--~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~~l 607 (766)
++|+..+.||+|+||.||+|.. .++. .+|+|++..... ..++|.+|++++.++ +||||+++++++.. ++..|+
T Consensus 7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~-~~~~~l 85 (303)
T cd05088 7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEH-RGYLYL 85 (303)
T ss_pred hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECC-CCCceE
Confidence 4688889999999999999985 4454 468887754322 245789999999999 89999999997765 567999
Q ss_pred EEeeCCCCChhhhhhccCCCC---------CcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCc
Q 004248 608 VYKYMPNGDLSSSLYRKTNTE---------DDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFE 678 (766)
Q Consensus 608 V~Ey~~~GsL~~~l~~~~~~~---------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~ 678 (766)
||||+++|+|.+++++..... .....+++.+++.++.|++.|++|||+. +|+||||||+|||+++++.
T Consensus 86 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dlkp~Nili~~~~~ 162 (303)
T cd05088 86 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYV 162 (303)
T ss_pred EEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEecCCCc
Confidence 999999999999997543210 1123589999999999999999999987 9999999999999999999
Q ss_pred EEeccchhhhhcCCCCc--cceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCC
Q 004248 679 VRLGSLSEVCAQGGDAH--QSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLS 748 (766)
Q Consensus 679 ~kl~DFG~a~~~~~~~~--~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~ 748 (766)
+||+|||+++....... ....+..|+|||...... ++.++|||||||++|||+| |..||..
T Consensus 163 ~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~Di~slG~il~ellt~g~~p~~~ 226 (303)
T cd05088 163 AKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSV---------YTTNSDVWSYGVLLWEIVSLGGTPYCG 226 (303)
T ss_pred EEeCccccCcccchhhhcccCCCcccccCHHHHhccC---------CcccccchhhhhHHHHHHhcCCCCccc
Confidence 99999999864321111 112345699999764433 4689999999999999998 9999853
No 200
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=99.97 E-value=5.1e-32 Score=286.25 Aligned_cols=203 Identities=19% Similarity=0.222 Sum_probs=170.0
Q ss_pred hCCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC-HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEe
Q 004248 533 TGDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK-TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYK 610 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~-~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~E 610 (766)
.++|+..+.||+|+||.||+|.. .++..||+|.+...... .+.|.+|++++++++||||+++++++.. ++..|+|||
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e 82 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFY-ENKLWILIE 82 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEec-CCeEEEEee
Confidence 35688889999999999999995 56899999998754432 4679999999999999999999998775 568999999
Q ss_pred eCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhc
Q 004248 611 YMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQ 690 (766)
Q Consensus 611 y~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~ 690 (766)
|+++|+|.+++.+.+ ..+++.+...++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 83 ~~~~~~L~~~~~~~~------~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~nili~~~~~~~l~d~g~~~~~ 153 (280)
T cd06611 83 FCDGGALDSIMLELE------RGLTEPQIRYVCRQMLEALNFLHSH---KVIHRDLKAGNILLTLDGDVKLADFGVSAKN 153 (280)
T ss_pred ccCCCcHHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEECCCCCEEEccCccchhh
Confidence 999999999987543 2489999999999999999999998 9999999999999999999999999988654
Q ss_pred CCC---CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 691 GGD---AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 691 ~~~---~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
... .....++..|++||........... ++.++|||||||++|||++|+.||...
T Consensus 154 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~----~~~~sDi~slG~il~~l~~g~~p~~~~ 211 (280)
T cd06611 154 KSTLQKRDTFIGTPYWMAPEVVACETFKDNP----YDYKADIWSLGITLIELAQMEPPHHEL 211 (280)
T ss_pred cccccccceeecchhhcCHHHHhhcccCCCC----CCccccHHHHHHHHHHHHhCCCCcccC
Confidence 321 2234578889999987543322212 578999999999999999999998543
No 201
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=99.97 E-value=1.4e-31 Score=278.93 Aligned_cols=199 Identities=17% Similarity=0.214 Sum_probs=167.2
Q ss_pred CCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC---HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEe
Q 004248 535 DFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK---TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYK 610 (766)
Q Consensus 535 ~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~---~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~E 610 (766)
+|+..+.||+|++|.||+++. .+++.||+|++...... .+.+.+|++++++++|||++++++.+...+...|+|||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG 80 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence 477889999999999999994 56789999999654322 45688999999999999999999866543446899999
Q ss_pred eCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhc
Q 004248 611 YMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQ 690 (766)
Q Consensus 611 y~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~ 690 (766)
|+++++|.+++..... ..+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 81 ~~~~~~l~~~l~~~~~-----~~l~~~~~~~~~~~l~~~l~~lH~~---~i~H~di~p~nil~~~~~~~~l~df~~~~~~ 152 (257)
T cd08223 81 FCEGGDLYHKLKEQKG-----KLLPENQVVEWFVQIAMALQYLHEK---HILHRDLKTQNVFLTRTNIIKVGDLGIARVL 152 (257)
T ss_pred ccCCCcHHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCchhEEEecCCcEEEecccceEEe
Confidence 9999999999975332 3489999999999999999999997 9999999999999999999999999998765
Q ss_pred CC---CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCCc
Q 004248 691 GG---DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSSR 750 (766)
Q Consensus 691 ~~---~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~~ 750 (766)
.. ......++..|+|||...... ++.++|||||||+++||++|+.||...+
T Consensus 153 ~~~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~Dv~slG~il~~l~~g~~~~~~~~ 206 (257)
T cd08223 153 ENQCDMASTLIGTPYYMSPELFSNKP---------YNYKSDVWALGCCVYEMATLKHAFNAKD 206 (257)
T ss_pred cccCCccccccCCcCccChhHhcCCC---------CCchhhhHHHHHHHHHHHcCCCCCCCCC
Confidence 32 122345678899999876543 4679999999999999999999996433
No 202
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=99.97 E-value=8.3e-32 Score=293.44 Aligned_cols=203 Identities=17% Similarity=0.217 Sum_probs=164.8
Q ss_pred CCCCccceeecCCcceEEEEEE------cCCcEEEEEEeeccccC--HHHHHHHHHHHhhc-CCCCcccceeEEEecCCc
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL------EGGIPVVIKRIDLQSVK--TEAYLLELDFFSKV-SHARLVPLLGHCMERENE 604 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~------~~g~~vavK~l~~~~~~--~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~ 604 (766)
++|+..+.||+|+||.||+|.. .+++.||||+++..... .+.+.+|++++.++ +|||||+++++|...+..
T Consensus 7 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~ 86 (343)
T cd05103 7 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGP 86 (343)
T ss_pred hHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCCc
Confidence 5688899999999999999973 35789999999754332 45688999999999 689999999988765567
Q ss_pred EEEEEeeCCCCChhhhhhccCCCC--------------------------------------------------------
Q 004248 605 KFLVYKYMPNGDLSSSLYRKTNTE-------------------------------------------------------- 628 (766)
Q Consensus 605 ~~lV~Ey~~~GsL~~~l~~~~~~~-------------------------------------------------------- 628 (766)
.++||||+++|+|.++++......
T Consensus 87 ~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (343)
T cd05103 87 LMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEA 166 (343)
T ss_pred eEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhhh
Confidence 899999999999999987532100
Q ss_pred ----CcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcCCC-----Ccccee
Q 004248 629 ----DDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGD-----AHQSRI 699 (766)
Q Consensus 629 ----~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~~~-----~~~~~~ 699 (766)
.....++|.++..++.|+++||+|||+. +|+||||||+||++++++++||+|||+++..... .....+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~ 243 (343)
T cd05103 167 EQEDLYKKVLTLEDLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARL 243 (343)
T ss_pred hhhhhhhccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCC
Confidence 0012478999999999999999999997 9999999999999999999999999998764221 111233
Q ss_pred eecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCC
Q 004248 700 TRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLS 748 (766)
Q Consensus 700 t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~ 748 (766)
+..|+|||...... ++.++|||||||++|||++ |..||..
T Consensus 244 ~~~y~aPE~~~~~~---------~~~~~Di~slG~~l~el~~~g~~p~~~ 284 (343)
T cd05103 244 PLKWMAPETIFDRV---------YTIQSDVWSFGVLLWEIFSLGASPYPG 284 (343)
T ss_pred CcceECcHHhcCCC---------CCchhhHHHHHHHHHHHHHCCCCCCCC
Confidence 55699999875443 4789999999999999997 9999854
No 203
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=99.97 E-value=1.8e-31 Score=280.53 Aligned_cols=200 Identities=19% Similarity=0.307 Sum_probs=161.7
Q ss_pred CCccceeecCCcceEEEEEEc-C---CcEEEEEEeeccccC---HHHHHHHHHHHhhcCCCCcccceeEEEecCC-----
Q 004248 536 FSDANLIKNGHSGDLFRGILE-G---GIPVVIKRIDLQSVK---TEAYLLELDFFSKVSHARLVPLLGHCMEREN----- 603 (766)
Q Consensus 536 ~~~~~~ig~G~~g~Vy~~~~~-~---g~~vavK~l~~~~~~---~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~----- 603 (766)
|+..+.||+|+||.||+|... + +..||||+++..... .+.+.+|++.+++++||||+++++++...+.
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 456789999999999999853 2 478999998754332 3578999999999999999999998765322
Q ss_pred cEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEecc
Q 004248 604 EKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGS 683 (766)
Q Consensus 604 ~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~D 683 (766)
..++||||+++|+|.+++...... .....+++.....++.|++.||+|||+. +|+||||||+||++++++.+||+|
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~-~~~~~~~~~~~~~~~~~i~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~d 156 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLG-GLPEKLPLQTLLKFMVDIALGMEYLSNR---NFIHRDLAARNCMLREDMTVCVAD 156 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhcc-CCcccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchheEEECCCCeEEECC
Confidence 379999999999999998654321 1223589999999999999999999997 999999999999999999999999
Q ss_pred chhhhhcCCCC-----ccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCC
Q 004248 684 LSEVCAQGGDA-----HQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLS 748 (766)
Q Consensus 684 FG~a~~~~~~~-----~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~ 748 (766)
||+++...... .....+..|+|||...... ++.++|||||||++|||++ |+.||..
T Consensus 157 fg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~---------~~~~~Dv~SlG~il~el~~~g~~p~~~ 218 (273)
T cd05035 157 FGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRV---------YTSKSDVWAFGVTMWEIATRGQTPYPG 218 (273)
T ss_pred ccceeeccccccccccccccCCccccCHhhcccCC---------CCcccchHHHHHHHHHHHhCCCCCCCC
Confidence 99998653211 1122356799999875433 4789999999999999999 8888854
No 204
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=99.97 E-value=8.5e-32 Score=286.30 Aligned_cols=200 Identities=18% Similarity=0.251 Sum_probs=165.5
Q ss_pred HhCCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC--HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEE
Q 004248 532 ATGDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK--TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLV 608 (766)
Q Consensus 532 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~--~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV 608 (766)
++++|...+.||+|+||.||+|.. .+|+.||+|++...... ...+.+|++++++++|+||+++++++.. ++..|+|
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~-~~~~~lv 81 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHT-KETLTFV 81 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEec-CCeEEEE
Confidence 457899999999999999999984 56889999998654322 3467899999999999999999997765 5678999
Q ss_pred EeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhh
Q 004248 609 YKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVC 688 (766)
Q Consensus 609 ~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~ 688 (766)
|||++ ++|.+++..... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++++||+|||+++
T Consensus 82 ~e~~~-~~l~~~~~~~~~------~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~ 151 (291)
T cd07870 82 FEYMH-TDLAQYMIQHPG------GLHPYNVRLFMFQLLRGLAYIHGQ---HILHRDLKPQNLLISYLGELKLADFGLAR 151 (291)
T ss_pred Eeccc-CCHHHHHHhCCC------CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEEcCCCcEEEecccccc
Confidence 99996 688777754322 378888999999999999999997 99999999999999999999999999987
Q ss_pred hcCCC---CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCCc
Q 004248 689 AQGGD---AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSSR 750 (766)
Q Consensus 689 ~~~~~---~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~~ 750 (766)
..... .....++..|+|||....... ++.++|||||||++|||+||+.||....
T Consensus 152 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~--------~~~~~Dv~slG~~l~~l~~g~~~f~~~~ 208 (291)
T cd07870 152 AKSIPSQTYSSEVVTLWYRPPDVLLGATD--------YSSALDIWGAGCIFIEMLQGQPAFPGVS 208 (291)
T ss_pred ccCCCCCCCCCccccccccCCceeecCCC--------CCcHHHHHHHHHHHHHHHhCCCCCCCch
Confidence 64221 223356788999998754321 4678999999999999999999996443
No 205
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=2.4e-33 Score=298.98 Aligned_cols=198 Identities=18% Similarity=0.226 Sum_probs=168.9
Q ss_pred CCccceeecCCcceEEEEE-EcCCcEEEEEEeeccccC-HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEeeCC
Q 004248 536 FSDANLIKNGHSGDLFRGI-LEGGIPVVIKRIDLQSVK-TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMP 613 (766)
Q Consensus 536 ~~~~~~ig~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~-~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey~~ 613 (766)
+.++..+|.|+||+||||+ ..++...|-|.|...... .++|.-|++||+.++||+||+|++.|+. ++.+++..|||.
T Consensus 34 WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~-enkLwiliEFC~ 112 (1187)
T KOG0579|consen 34 WEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYF-ENKLWILIEFCG 112 (1187)
T ss_pred HHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhc-cCceEEEEeecC
Confidence 3455789999999999998 555667788888655443 6789999999999999999999987665 578999999999
Q ss_pred CCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhc---
Q 004248 614 NGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQ--- 690 (766)
Q Consensus 614 ~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~--- 690 (766)
||-.+.++-.-+ ..+.+.++..+++|++.||.|||+. +|||||||+.|||++-+|.++++|||.+...
T Consensus 113 GGAVDaimlEL~------r~LtE~QIqvvc~q~ldALn~LHs~---~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t 183 (1187)
T KOG0579|consen 113 GGAVDAIMLELG------RVLTEDQIQVVCYQVLDALNWLHSQ---NIIHRDLKAGNILLTLDGDIRLADFGVSAKNKST 183 (1187)
T ss_pred CchHhHHHHHhc------cccchHHHHHHHHHHHHHHHHHhhc---chhhhhccccceEEEecCcEeeecccccccchhH
Confidence 999998876543 3599999999999999999999998 9999999999999999999999999987432
Q ss_pred CCCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCC
Q 004248 691 GGDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNL 747 (766)
Q Consensus 691 ~~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~ 747 (766)
........||++|||||+..+.+....+ |+.++||||||++|.||+-+.+|-.
T Consensus 184 ~qkRDsFIGTPYWMAPEVvmCET~KD~P----YDykaDiWSlGITLIEMAqiEPPHh 236 (1187)
T KOG0579|consen 184 RQKRDSFIGTPYWMAPEVVMCETFKDQP----YDYKADIWSLGITLIEMAQIEPPHH 236 (1187)
T ss_pred HhhhccccCCcccccchheeeccccCCC----chhhhhHHhhhhHHHHHhccCCCcc
Confidence 1234467899999999998887655445 6899999999999999999999863
No 206
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=99.97 E-value=1.1e-31 Score=284.20 Aligned_cols=193 Identities=21% Similarity=0.332 Sum_probs=161.3
Q ss_pred CCccceeecCCcceEEEEE-----EcCCcEEEEEEeecccc--CHHHHHHHHHHHhhcCCCCcccceeEEEecC-CcEEE
Q 004248 536 FSDANLIKNGHSGDLFRGI-----LEGGIPVVIKRIDLQSV--KTEAYLLELDFFSKVSHARLVPLLGHCMERE-NEKFL 607 (766)
Q Consensus 536 ~~~~~~ig~G~~g~Vy~~~-----~~~g~~vavK~l~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~~~l 607 (766)
|+..+.||+|+||+||++. ..++..||+|.++.... ..+.|.+|++++++++||||+++++++...+ ...++
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (283)
T cd05080 6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQL 85 (283)
T ss_pred ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEE
Confidence 4788999999999998865 24678999999875433 3567899999999999999999999876532 35899
Q ss_pred EEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhh
Q 004248 608 VYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEV 687 (766)
Q Consensus 608 V~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a 687 (766)
||||+++|+|.+++... .++|.++..++.|++.||+|||+. +|+||||||+||++++++.+||+|||++
T Consensus 86 v~e~~~~~~l~~~~~~~--------~l~~~~~~~i~~~l~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~ 154 (283)
T cd05080 86 IMEYVPLGSLRDYLPKH--------KLNLAQLLLFAQQICEGMAYLHSQ---HYIHRDLAARNVLLDNDRLVKIGDFGLA 154 (283)
T ss_pred EecCCCCCCHHHHHHHc--------CCCHHHHHHHHHHHHHHHHHHHHC---CeeccccChheEEEcCCCcEEEeecccc
Confidence 99999999999999642 389999999999999999999997 9999999999999999999999999999
Q ss_pred hhcCCCC------ccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 688 CAQGGDA------HQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 688 ~~~~~~~------~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
+...... ....++..|++||...... ++.++|||||||++|||+||+.|+..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~---------~~~~~Di~slG~~l~el~tg~~p~~~ 212 (283)
T cd05080 155 KAVPEGHEYYRVREDGDSPVFWYAVECLKENK---------FSYASDVWSFGVTLYELLTHCDSKQS 212 (283)
T ss_pred cccCCcchhhccCCCCCCCceeeCHhHhcccC---------CCcccccHHHHHHHHHHHhCCCCCCC
Confidence 7653221 1123455689999875443 47899999999999999999999853
No 207
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=99.97 E-value=9.9e-32 Score=284.62 Aligned_cols=197 Identities=21% Similarity=0.291 Sum_probs=164.9
Q ss_pred CCCccceeecCCcceEEEEEE-cCCcEEEEEEeecccc---CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEe
Q 004248 535 DFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV---KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYK 610 (766)
Q Consensus 535 ~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~E 610 (766)
+|+..+.||+|++|.||+|+. .+++.||||+++.... ..+.+.+|++++++++||||+++++++.. ++..|+|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~~v~e 79 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQ-ESRLYLIFE 79 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEee-CCeEEEEEe
Confidence 477889999999999999995 5789999999865332 24678899999999999999999998775 568999999
Q ss_pred eCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhc
Q 004248 611 YMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQ 690 (766)
Q Consensus 611 y~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~ 690 (766)
|++ |+|.+++..... ...+++.++..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++..
T Consensus 80 ~~~-~~l~~~~~~~~~----~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 151 (285)
T cd07861 80 FLS-MDLKKYLDSLPK----GQYMDAELVKSYLYQILQGILFCHSR---RVLHRDLKPQNLLIDNKGVIKLADFGLARAF 151 (285)
T ss_pred cCC-CCHHHHHhcCCC----CCcCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEEcCCCcEEECcccceeec
Confidence 998 689988864321 13589999999999999999999997 9999999999999999999999999998755
Q ss_pred CCC---CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 691 GGD---AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 691 ~~~---~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
... .....++..|+|||....... ++.++|||||||++|||+||+.||..
T Consensus 152 ~~~~~~~~~~~~~~~y~aPE~~~~~~~--------~~~~~Dv~slG~il~~l~tg~~~~~~ 204 (285)
T cd07861 152 GIPVRVYTHEVVTLWYRAPEVLLGSPR--------YSTPVDIWSIGTIFAEMATKKPLFHG 204 (285)
T ss_pred CCCcccccCCcccccccChHHhcCCCC--------cCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 322 122356788999997654321 46799999999999999999999853
No 208
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=99.97 E-value=1e-31 Score=284.53 Aligned_cols=196 Identities=18% Similarity=0.204 Sum_probs=165.4
Q ss_pred CCCCccceeecCCcceEEEEEEc-CCcEEEEEEeecccc---CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGILE-GGIPVVIKRIDLQSV---KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVY 609 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~---~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~ 609 (766)
++|+..+.||+|+||.||+|+.. +|+.||+|++..... ..+.+.+|++++++++||||+++++++.. .+..++||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~~~v~ 79 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRR-KRKLHLVF 79 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEee-CCEEEEEE
Confidence 46888899999999999999964 689999999864332 24568899999999999999999998765 56789999
Q ss_pred eeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhh
Q 004248 610 KYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCA 689 (766)
Q Consensus 610 Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~ 689 (766)
||+++++|..++.... .++|.++..++.|++.||+|||+. +|+||||||+||+++.++++||+|||++..
T Consensus 80 e~~~~~~l~~~~~~~~-------~~~~~~~~~~~~ql~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~ 149 (286)
T cd07847 80 EYCDHTVLNELEKNPR-------GVPEHLIKKIIWQTLQAVNFCHKH---NCIHRDVKPENILITKQGQIKLCDFGFARI 149 (286)
T ss_pred eccCccHHHHHHhCCC-------CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCChhhEEEcCCCcEEECcccccee
Confidence 9999988888765432 389999999999999999999997 999999999999999999999999999986
Q ss_pred cCCC---CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 690 QGGD---AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 690 ~~~~---~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
.... .....++..|+|||.+..... ++.++|||||||++|||+||+.||..
T Consensus 150 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~--------~~~~~Di~slG~i~~~l~~g~~p~~~ 203 (286)
T cd07847 150 LTGPGDDYTDYVATRWYRAPELLVGDTQ--------YGPPVDVWAIGCVFAELLTGQPLWPG 203 (286)
T ss_pred cCCCcccccCcccccccCCHHHHhCCCC--------cCchhhhHHHHHHHHHHHhCCCCCCC
Confidence 6332 223456788999998654321 46899999999999999999999853
No 209
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=99.97 E-value=1.2e-31 Score=285.30 Aligned_cols=203 Identities=19% Similarity=0.297 Sum_probs=166.7
Q ss_pred CCCCccceeecCCcceEEEEEE------cCCcEEEEEEeeccccC-HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL------EGGIPVVIKRIDLQSVK-TEAYLLELDFFSKVSHARLVPLLGHCMERENEKF 606 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~------~~g~~vavK~l~~~~~~-~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~ 606 (766)
++|...+.||+|+||.||+|+. .++..||+|.+...... .+.+.+|++++++++||||+++++++.. ++..+
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~ 83 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGD-GDPLI 83 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEcc-CCceE
Confidence 3577789999999999999973 23567999998654433 4579999999999999999999998765 56799
Q ss_pred EEEeeCCCCChhhhhhccCCC---------CCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCC
Q 004248 607 LVYKYMPNGDLSSSLYRKTNT---------EDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKF 677 (766)
Q Consensus 607 lV~Ey~~~GsL~~~l~~~~~~---------~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~ 677 (766)
+||||+++|+|.+++...... ......++|.+++.++.|++.|++|||++ +|+||||||+||++++++
T Consensus 84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Nil~~~~~ 160 (291)
T cd05094 84 MVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ---HFVHRDLATRNCLVGANL 160 (291)
T ss_pred EEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccCC
Confidence 999999999999999754320 01123489999999999999999999998 999999999999999999
Q ss_pred cEEeccchhhhhcCCC-----CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCCC
Q 004248 678 EVRLGSLSEVCAQGGD-----AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLSS 749 (766)
Q Consensus 678 ~~kl~DFG~a~~~~~~-----~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~~ 749 (766)
.+||+|||+++..... .....++..|+|||...... ++.++|||||||++|||+| |+.||...
T Consensus 161 ~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~Di~slG~il~el~t~g~~p~~~~ 229 (291)
T cd05094 161 LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRK---------FTTESDVWSFGVILWEIFTYGKQPWFQL 229 (291)
T ss_pred cEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCC---------CCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 9999999999765322 12234567899999875443 4789999999999999999 99998543
No 210
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=99.97 E-value=1.1e-31 Score=279.60 Aligned_cols=198 Identities=18% Similarity=0.205 Sum_probs=167.8
Q ss_pred CCCccceeecCCcceEEEEEE-cCCcEEEEEEeecccc--CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEee
Q 004248 535 DFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV--KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKY 611 (766)
Q Consensus 535 ~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey 611 (766)
+|+..++||+|+||.||++.. .+++.||+|.++.... ..+.+.+|++++++++||||+++++.+.. ++..|+||||
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~ 79 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEA-DGHLYIVMEY 79 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEE-CCEEEEEEee
Confidence 477889999999999999984 5789999999865332 24678899999999999999999997765 5789999999
Q ss_pred CCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcC
Q 004248 612 MPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQG 691 (766)
Q Consensus 612 ~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~ 691 (766)
+++|+|.+++..... ..+++.....++.|++.||.|||+. +|+|+||||+||++++++.++++|||.++...
T Consensus 80 ~~~~~l~~~~~~~~~-----~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~ 151 (255)
T cd08219 80 CDGGDLMQKIKLQRG-----KLFPEDTILQWFVQMCLGVQHIHEK---RVLHRDIKSKNIFLTQNGKVKLGDFGSARLLT 151 (255)
T ss_pred CCCCcHHHHHHhccC-----CCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEECCCCcEEEcccCcceeec
Confidence 999999999865432 3478999999999999999999997 99999999999999999999999999987653
Q ss_pred CC---CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCCc
Q 004248 692 GD---AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSSR 750 (766)
Q Consensus 692 ~~---~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~~ 750 (766)
.. .....++..|+|||...... ++.++|||||||++|||++|+.||....
T Consensus 152 ~~~~~~~~~~~~~~~~aPE~~~~~~---------~~~~~Dv~slG~i~~~l~~g~~p~~~~~ 204 (255)
T cd08219 152 SPGAYACTYVGTPYYVPPEIWENMP---------YNNKSDIWSLGCILYELCTLKHPFQANS 204 (255)
T ss_pred ccccccccccCCccccCHHHHccCC---------cCchhhhhhhchhheehhhccCCCCCCC
Confidence 22 22345788899999875443 4789999999999999999999996543
No 211
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=99.97 E-value=3.2e-32 Score=288.30 Aligned_cols=198 Identities=18% Similarity=0.229 Sum_probs=164.9
Q ss_pred CCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC---HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEe
Q 004248 535 DFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK---TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYK 610 (766)
Q Consensus 535 ~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~---~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~E 610 (766)
+|+..+.||+|+||.||+|+. .+|+.||+|+++..... .+.+.+|++++++++||||+++++++.+ .+..++|+|
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e 79 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHS-DKKLTLVFE 79 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhcc-CCceEEEEe
Confidence 477789999999999999995 57899999999654322 3568889999999999999999997765 568999999
Q ss_pred eCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhc
Q 004248 611 YMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQ 690 (766)
Q Consensus 611 y~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~ 690 (766)
|++ |+|.+++.... ..+++.....++.||++||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 80 ~~~-~~l~~~~~~~~------~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~ 149 (284)
T cd07839 80 YCD-QDLKKYFDSCN------GDIDPEIVKSFMFQLLKGLAFCHSH---NVLHRDLKPQNLLINKNGELKLADFGLARAF 149 (284)
T ss_pred cCC-CCHHHHHHhcC------CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEcCCCcEEECccchhhcc
Confidence 997 58888876432 2489999999999999999999997 9999999999999999999999999999865
Q ss_pred CCC---CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCCcc
Q 004248 691 GGD---AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSSRF 751 (766)
Q Consensus 691 ~~~---~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~~~ 751 (766)
... .....++..|+|||.+..... ++.++|||||||++|||+||+.|++....
T Consensus 150 ~~~~~~~~~~~~~~~y~aPE~~~~~~~--------~~~~~DiwslG~il~~l~tg~~p~~~~~~ 205 (284)
T cd07839 150 GIPVRCYSAEVVTLWYRPPDVLFGAKL--------YSTSIDMWSAGCIFAELANAGRPLFPGND 205 (284)
T ss_pred CCCCCCcCCCccccCCcChHHHhCCcc--------cCcHHHHHHHHHHHHHHHhcCCCCcCCCC
Confidence 322 223456788999998754321 47899999999999999999999765443
No 212
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.97 E-value=1.5e-33 Score=323.72 Aligned_cols=196 Identities=20% Similarity=0.286 Sum_probs=166.4
Q ss_pred CCCCccceeecCCcceEEEEE-EcCCcEEEEEEeeccccC---HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGI-LEGGIPVVIKRIDLQSVK---TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVY 609 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~---~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~ 609 (766)
-+++....||.|.||.||-|. .++|...|||.+.-.... ...+.+|+.++..++|||+|+.+|+-.. +++.+|.|
T Consensus 1235 ~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvH-Rekv~IFM 1313 (1509)
T KOG4645|consen 1235 FRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVH-REKVYIFM 1313 (1509)
T ss_pred eeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeec-HHHHHHHH
Confidence 345667889999999999999 788999999998654332 3467889999999999999999997665 46799999
Q ss_pred eeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhh
Q 004248 610 KYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCA 689 (766)
Q Consensus 610 Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~ 689 (766)
|||++|+|.+++...+. .++.-...+..|++.|++|||++ +||||||||+||+++.+|-+|.+|||.|..
T Consensus 1314 EyC~~GsLa~ll~~gri-------~dE~vt~vyt~qll~gla~LH~~---gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~k 1383 (1509)
T KOG4645|consen 1314 EYCEGGSLASLLEHGRI-------EDEMVTRVYTKQLLEGLAYLHEH---GIVHRDIKPANILLDFNGLIKYGDFGSAVK 1383 (1509)
T ss_pred HHhccCcHHHHHHhcch-------hhhhHHHHHHHHHHHHHHHHHhc---CceecCCCccceeeecCCcEEeecccceeE
Confidence 99999999999975432 66777778899999999999998 999999999999999999999999999976
Q ss_pred cCCC-------CccceeeecccCCCCCCCCc-eeeeeeeeecccccceecchHHHHHHhcCCCCCC
Q 004248 690 QGGD-------AHQSRITRLLRLPQSSEQGS-SGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNL 747 (766)
Q Consensus 690 ~~~~-------~~~~~~t~~y~aPe~~~~~~-~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~ 747 (766)
+... .....||++|||||++.+.. .|. .-++||||+|||++||+|||+|+.
T Consensus 1384 i~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~-------~~A~DiWslGCVVlEM~tGkrPW~ 1442 (1509)
T KOG4645|consen 1384 IKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGH-------GGAADIWSLGCVVLEMATGKRPWA 1442 (1509)
T ss_pred ecCchhcCCHHHHhhcCCchhcCchhhcccccCCC-------CcchhhhcccceEEEeecCCCchh
Confidence 5322 23568999999999987654 333 357899999999999999999994
No 213
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.97 E-value=1.2e-31 Score=285.96 Aligned_cols=196 Identities=20% Similarity=0.299 Sum_probs=168.6
Q ss_pred CCCCccceeecCCcceEEEEE-EcCCcEEEEEEeeccccC-HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEee
Q 004248 534 GDFSDANLIKNGHSGDLFRGI-LEGGIPVVIKRIDLQSVK-TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKY 611 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~-~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey 611 (766)
.+|+..+.||.|+||.||+|. ..+++.||+|.+...... .+.+.+|++++++++||||+++++++.. ++..|+|+||
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e~ 97 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLV-GDELFVVMEY 97 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEec-CceEEEEEEe
Confidence 358888999999999999998 467899999999754433 5678999999999999999999998765 5689999999
Q ss_pred CCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcC
Q 004248 612 MPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQG 691 (766)
Q Consensus 612 ~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~ 691 (766)
+++|+|.+++.+. .++|.++..++.|++.|++|||+. +++||||||+||+++.++.+||+|||+++...
T Consensus 98 ~~~~~L~~~~~~~--------~l~~~~~~~i~~~l~~al~~LH~~---~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~ 166 (296)
T cd06655 98 LAGGSLTDVVTET--------CMDEAQIAAVCRECLQALEFLHAN---QVIHRDIKSDNVLLGMDGSVKLTDFGFCAQIT 166 (296)
T ss_pred cCCCcHHHHHHhc--------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccchhcc
Confidence 9999999988642 389999999999999999999997 99999999999999999999999999987653
Q ss_pred CC---CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCCc
Q 004248 692 GD---AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSSR 750 (766)
Q Consensus 692 ~~---~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~~ 750 (766)
.. .....++..|+|||...... ++.++|||||||++|||+||+.||...+
T Consensus 167 ~~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~Dv~slGvil~~lltg~~pf~~~~ 219 (296)
T cd06655 167 PEQSKRSTMVGTPYWMAPEVVTRKA---------YGPKVDIWSLGIMAIEMVEGEPPYLNEN 219 (296)
T ss_pred cccccCCCcCCCccccCcchhcCCC---------CCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 22 22345778899999876443 4679999999999999999999996543
No 214
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=99.97 E-value=5e-32 Score=287.98 Aligned_cols=198 Identities=18% Similarity=0.266 Sum_probs=165.1
Q ss_pred CCCCccceeecCCcceEEEEEEc-CCcEEEEEEeeccccC--HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEe
Q 004248 534 GDFSDANLIKNGHSGDLFRGILE-GGIPVVIKRIDLQSVK--TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYK 610 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~--~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~E 610 (766)
++|+..+.||+|++|.||+|+.. +++.||||.+...... ...+.+|++++++++||||+++++++.+ ++..++|||
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e 83 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHT-KKTLTLVFE 83 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEec-CCeEEEEEe
Confidence 57888999999999999999954 6899999998654322 3467889999999999999999998765 568999999
Q ss_pred eCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhc
Q 004248 611 YMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQ 690 (766)
Q Consensus 611 y~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~ 690 (766)
|++ ++|.+++.+... .+++.....++.|++.||.|||+. +|+||||||+||++++++.+||+|||+++..
T Consensus 84 ~~~-~~L~~~~~~~~~------~~~~~~~~~~~~ql~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~ 153 (291)
T cd07844 84 YLD-TDLKQYMDDCGG------GLSMHNVRLFLFQLLRGLAYCHQR---RVLHRDLKPQNLLISERGELKLADFGLARAK 153 (291)
T ss_pred cCC-CCHHHHHHhCCC------CCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCHHHEEEcCCCCEEECcccccccc
Confidence 998 499998875432 488999999999999999999997 9999999999999999999999999998754
Q ss_pred CCC---CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCCc
Q 004248 691 GGD---AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSSR 750 (766)
Q Consensus 691 ~~~---~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~~ 750 (766)
... .....++..|+|||....... ++.++||||+||++|||++|+.||....
T Consensus 154 ~~~~~~~~~~~~~~~~~aPE~~~~~~~--------~~~~~Dv~slG~il~~l~~g~~~~~~~~ 208 (291)
T cd07844 154 SVPSKTYSNEVVTLWYRPPDVLLGSTE--------YSTSLDMWGVGCIFYEMATGRPLFPGST 208 (291)
T ss_pred CCCCccccccccccccCCcHHhhcCcc--------cCcHHHHHHHHHHHHHHHhCCCCCCCCc
Confidence 221 122345778999997653221 4789999999999999999999995443
No 215
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=99.97 E-value=2.9e-32 Score=285.00 Aligned_cols=192 Identities=28% Similarity=0.439 Sum_probs=157.9
Q ss_pred cceeecCCcceEEEEEEc-----CCcEEEEEEeeccccC--HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEee
Q 004248 539 ANLIKNGHSGDLFRGILE-----GGIPVVIKRIDLQSVK--TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKY 611 (766)
Q Consensus 539 ~~~ig~G~~g~Vy~~~~~-----~g~~vavK~l~~~~~~--~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey 611 (766)
.+.||+|+||.||+|.+. .+..|+||.++..... .++|.+|++.+++++||||++++|+|.. .+..++||||
T Consensus 4 ~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~-~~~~~lv~e~ 82 (259)
T PF07714_consen 4 IKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIE-NEPLFLVMEY 82 (259)
T ss_dssp EEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEES-SSSEEEEEE-
T ss_pred eeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccc-cccccccccc
Confidence 578999999999999966 3678999999653322 5789999999999999999999999985 4579999999
Q ss_pred CCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcC
Q 004248 612 MPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQG 691 (766)
Q Consensus 612 ~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~ 691 (766)
|++|+|.++|+.... ..+++.++..++.|||+||+|||+. +|+||||+++||++++++.+||+|||+++...
T Consensus 83 ~~~g~L~~~L~~~~~-----~~~~~~~~~~i~~~i~~~l~~Lh~~---~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~ 154 (259)
T PF07714_consen 83 CPGGSLDDYLKSKNK-----EPLSEQQRLSIAIQIAEALSYLHSN---NIIHGNLSPSNILLDSNGQVKLSDFGLSRPIS 154 (259)
T ss_dssp -TTEBHHHHHHHTCT-----TTSBHHHHHHHHHHHHHHHHHHHHT---TEEEST-SGGGEEEETTTEEEEESTTTGEETT
T ss_pred ccccccccccccccc-----ccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccc
Confidence 999999999987622 3589999999999999999999998 89999999999999999999999999997662
Q ss_pred CC-----CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCC
Q 004248 692 GD-----AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLS 748 (766)
Q Consensus 692 ~~-----~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~ 748 (766)
.. .........|+|||...... ++.++||||||+++||++| |+.|+..
T Consensus 155 ~~~~~~~~~~~~~~~~~~aPE~~~~~~---------~~~ksDVysfG~~l~ei~~~~~~p~~~ 208 (259)
T PF07714_consen 155 EKSKYKNDSSQQLPLRYLAPEVLKDGE---------YTKKSDVYSFGMLLYEILTLGKFPFSD 208 (259)
T ss_dssp TSSSEEESTTSESGGGGS-HHHHHHSE---------ESHHHHHHHHHHHHHHHHTTSSGTTTT
T ss_pred ccccccccccccccccccccccccccc---------ccccccccccccccccccccccccccc
Confidence 11 12234566789999765443 4889999999999999999 7888854
No 216
>PHA03209 serine/threonine kinase US3; Provisional
Probab=99.97 E-value=7.7e-32 Score=295.25 Aligned_cols=192 Identities=21% Similarity=0.241 Sum_probs=161.4
Q ss_pred HhCCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccCHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEe
Q 004248 532 ATGDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYK 610 (766)
Q Consensus 532 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~E 610 (766)
...+|...+.||+|+||.||+|+. .+++.||+|.... .....|+.++++++|||||++++++.. .+..++|||
T Consensus 64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~-----~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e 137 (357)
T PHA03209 64 ASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQK-----GTTLIEAMLLQNVNHPSVIRMKDTLVS-GAITCMVLP 137 (357)
T ss_pred hhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCc-----cccHHHHHHHHhCCCCCCcChhheEEe-CCeeEEEEE
Confidence 345799999999999999999995 4578999997532 234579999999999999999998876 567899999
Q ss_pred eCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhc
Q 004248 611 YMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQ 690 (766)
Q Consensus 611 y~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~ 690 (766)
|+. |+|.+++.... ..++|.++..|+.||+.||+|||+. +||||||||+|||++.++.+||+|||+++..
T Consensus 138 ~~~-~~l~~~l~~~~------~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~ 207 (357)
T PHA03209 138 HYS-SDLYTYLTKRS------RPLPIDQALIIEKQILEGLRYLHAQ---RIIHRDVKTENIFINDVDQVCIGDLGAAQFP 207 (357)
T ss_pred ccC-CcHHHHHHhcc------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEecCcccccc
Confidence 996 69999886543 2489999999999999999999997 9999999999999999999999999999754
Q ss_pred C--CCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 691 G--GDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 691 ~--~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
. .......+|..|+|||.+.... ++.++|||||||++|||+++..|++.
T Consensus 208 ~~~~~~~~~~gt~~y~aPE~~~~~~---------~~~~~DiwSlGvvl~ell~~~~~~f~ 258 (357)
T PHA03209 208 VVAPAFLGLAGTVETNAPEVLARDK---------YNSKADIWSAGIVLFEMLAYPSTIFE 258 (357)
T ss_pred ccCcccccccccccccCCeecCCCC---------CCchhhHHHHHHHHHHHHHcCCcccc
Confidence 2 2233456899999999886544 47899999999999999997666643
No 217
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.97 E-value=1e-31 Score=286.79 Aligned_cols=196 Identities=19% Similarity=0.264 Sum_probs=168.6
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC-HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEee
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK-TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKY 611 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~-~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey 611 (766)
++|...+.||+|+||.||+|+. .+++.||+|.+...... .+.+.+|+.++++++||||+++++++.. ++..|+||||
T Consensus 19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~~lv~e~ 97 (297)
T cd06656 19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV-GDELWVVMEY 97 (297)
T ss_pred hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEeecc
Confidence 5688899999999999999994 67999999999764433 5678899999999999999999998765 5689999999
Q ss_pred CCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcC
Q 004248 612 MPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQG 691 (766)
Q Consensus 612 ~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~ 691 (766)
+++|+|.+++.+. .+++.++..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 98 ~~~~~L~~~~~~~--------~~~~~~~~~~~~~l~~~L~~LH~~---~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~ 166 (297)
T cd06656 98 LAGGSLTDVVTET--------CMDEGQIAAVCRECLQALDFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQIT 166 (297)
T ss_pred cCCCCHHHHHHhC--------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEECcCccceEcc
Confidence 9999999998642 378999999999999999999987 99999999999999999999999999987653
Q ss_pred CC---CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCCc
Q 004248 692 GD---AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSSR 750 (766)
Q Consensus 692 ~~---~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~~ 750 (766)
.. .....++..|++||...... ++.++|||||||++|||+||+.||...+
T Consensus 167 ~~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~Di~slGvil~~l~tg~~pf~~~~ 219 (297)
T cd06656 167 PEQSKRSTMVGTPYWMAPEVVTRKA---------YGPKVDIWSLGIMAIEMVEGEPPYLNEN 219 (297)
T ss_pred CCccCcCcccCCccccCHHHHcCCC---------CCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 22 22345778899999876543 4689999999999999999999996443
No 218
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=99.97 E-value=1.7e-31 Score=277.07 Aligned_cols=190 Identities=22% Similarity=0.377 Sum_probs=160.2
Q ss_pred ceeecCCcceEEEEEEcCCcEEEEEEeeccccC--HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEeeCCCCCh
Q 004248 540 NLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVK--TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDL 617 (766)
Q Consensus 540 ~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~--~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey~~~GsL 617 (766)
++||+|+||.||+|...+++.||+|.+...... ...|.+|++++++++||||++++++|.. .+..++||||+++|+|
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~~~~~L 79 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQ-RQPIYIVMELVPGGDF 79 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEec-CCccEEEEECCCCCcH
Confidence 478999999999999888999999998654322 4578999999999999999999998865 5679999999999999
Q ss_pred hhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcCCCCc--
Q 004248 618 SSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAH-- 695 (766)
Q Consensus 618 ~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~~~~~-- 695 (766)
.+++..... .++|.++..++.|++.||.|+|+. +++||||||+||++++++.+||+|||+++.......
T Consensus 80 ~~~~~~~~~------~~~~~~~~~~~~~i~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~ 150 (250)
T cd05085 80 LSFLRKKKD------ELKTKQLVKFALDAAAGMAYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSS 150 (250)
T ss_pred HHHHHhcCC------CCCHHHHHHHHHHHHHHHHHHHhC---CeeecccChheEEEcCCCeEEECCCccceecccccccc
Confidence 999865432 378999999999999999999987 999999999999999999999999999875432211
Q ss_pred --cceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCC
Q 004248 696 --QSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLS 748 (766)
Q Consensus 696 --~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~ 748 (766)
...++..|+|||....+. ++.++|||||||++||+++ |+.||..
T Consensus 151 ~~~~~~~~~y~aPE~~~~~~---------~~~~~Di~slG~ll~~~~~~g~~p~~~ 197 (250)
T cd05085 151 SGLKQIPIKWTAPEALNYGR---------YSSESDVWSYGILLWETFSLGVCPYPG 197 (250)
T ss_pred CCCCCCcccccCHHHhccCC---------CCchhHHHHHHHHHHHHhcCCCCCCCC
Confidence 122345699999875443 4789999999999999998 9999854
No 219
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=99.97 E-value=1.7e-31 Score=278.55 Aligned_cols=188 Identities=17% Similarity=0.271 Sum_probs=157.3
Q ss_pred eeecCCcceEEEEEE---cCCcEEEEEEeeccccC---HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEeeCCC
Q 004248 541 LIKNGHSGDLFRGIL---EGGIPVVIKRIDLQSVK---TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPN 614 (766)
Q Consensus 541 ~ig~G~~g~Vy~~~~---~~g~~vavK~l~~~~~~---~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey~~~ 614 (766)
+||+|+||.||+|.. .++..||+|+++..... .+++.+|+.++++++||||+++++++. ++..++||||+++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--~~~~~lv~e~~~~ 79 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE--AESWMLVMELAEL 79 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc--CCCcEEEEecCCC
Confidence 689999999999974 45789999998654322 467999999999999999999999774 3468999999999
Q ss_pred CChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcCCCC
Q 004248 615 GDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDA 694 (766)
Q Consensus 615 GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~~~~ 694 (766)
|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++......
T Consensus 80 ~~L~~~l~~~~-------~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~ 149 (257)
T cd05116 80 GPLNKFLQKNK-------HVTEKNITELVHQVSMGMKYLEET---NFVHRDLAARNVLLVTQHYAKISDFGLSKALGADE 149 (257)
T ss_pred CcHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchhhEEEcCCCeEEECCCccccccCCCC
Confidence 99999996543 389999999999999999999987 99999999999999999999999999997653321
Q ss_pred ------ccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCCC
Q 004248 695 ------HQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLSS 749 (766)
Q Consensus 695 ------~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~~ 749 (766)
....++..|+|||...... ++.++|||||||++|||+| |+.||...
T Consensus 150 ~~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~Di~slG~~l~el~t~g~~p~~~~ 202 (257)
T cd05116 150 NYYKAKTHGKWPVKWYAPECMNYYK---------FSSKSDVWSFGVLMWEAFSYGQKPYKGM 202 (257)
T ss_pred CeeeecCCCCCCccccCHhHhccCC---------cCchhHHHHHHHHHHHHHhCCCCCCCCC
Confidence 1122346799999775433 4679999999999999998 99999643
No 220
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=99.97 E-value=1.7e-31 Score=279.14 Aligned_cols=196 Identities=16% Similarity=0.293 Sum_probs=166.3
Q ss_pred CCCCccceeecCCcceEEEEEEcCCcEEEEEEeeccccCHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEeeCC
Q 004248 534 GDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMP 613 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey~~ 613 (766)
++|+..+.||+|+||.||+|...++..+|+|.+.......+.|.+|++++++++|+||+++++++.+ ...++||||++
T Consensus 6 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~v~e~~~ 83 (260)
T cd05073 6 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK--EPIYIITEFMA 83 (260)
T ss_pred cceeEEeEecCccceEEEEEEecCCccEEEEecCCChhHHHHHHHHHHHHHhcCCCCcceEEEEEcC--CCeEEEEEeCC
Confidence 5688899999999999999998778889999987655456789999999999999999999987654 57899999999
Q ss_pred CCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcCCC
Q 004248 614 NGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGD 693 (766)
Q Consensus 614 ~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~~~ 693 (766)
+|+|.+++.+... ..++|.++..++.|++.||+|||+. +++||||||+||+++.++.+||+|||.++.....
T Consensus 84 ~~~L~~~~~~~~~-----~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~ 155 (260)
T cd05073 84 KGSLLDFLKSDEG-----SKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDN 155 (260)
T ss_pred CCcHHHHHHhCCc-----cccCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCCcceeeccCC
Confidence 9999999976432 3489999999999999999999987 9999999999999999999999999998765321
Q ss_pred C----ccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCC
Q 004248 694 A----HQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLS 748 (766)
Q Consensus 694 ~----~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~ 748 (766)
. ....++..|+|||...... ++.++|||||||++||++| |+.||..
T Consensus 156 ~~~~~~~~~~~~~y~~PE~~~~~~---------~~~~~Di~slG~~l~~l~t~g~~p~~~ 206 (260)
T cd05073 156 EYTAREGAKFPIKWTAPEAINFGS---------FTIKSDVWSFGILLMEIVTYGRIPYPG 206 (260)
T ss_pred CcccccCCcccccccCHhHhccCC---------cCccccchHHHHHHHHHHhcCCCCCCC
Confidence 1 1122345699999875433 4789999999999999999 8999854
No 221
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=99.97 E-value=1.1e-31 Score=281.44 Aligned_cols=200 Identities=19% Similarity=0.281 Sum_probs=168.5
Q ss_pred CCCCccceeecCCcceEEEEE-EcCCcEEEEEEeecccc----CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGI-LEGGIPVVIKRIDLQSV----KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLV 608 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~-~~~g~~vavK~l~~~~~----~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV 608 (766)
++|+..+.||+|+||.||+|. ..+++.||||.+..... ..+++.+|++++++++||||+++++++.+ ++..++|
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~~~v 80 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIE-DNELNIV 80 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEe-CCeEEEE
Confidence 467888999999999999999 46899999998865322 24578999999999999999999998776 5689999
Q ss_pred EeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhh
Q 004248 609 YKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVC 688 (766)
Q Consensus 609 ~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~ 688 (766)
|||+++|+|.+++..... ....++|.++..++.|++.||+|||+. +++||||||+||+++.++.+||+|||+++
T Consensus 81 ~e~~~~~~L~~~~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~ 154 (267)
T cd08229 81 LELADAGDLSRMIKHFKK---QKRLIPEKTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGR 154 (267)
T ss_pred EEecCCCCHHHHHHHhhc---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEECcchhhh
Confidence 999999999999864321 123589999999999999999999997 99999999999999999999999999987
Q ss_pred hcCCC---CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 689 AQGGD---AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 689 ~~~~~---~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
..... .....++..|+|||...... ++.++|||||||++|||++|+.||...
T Consensus 155 ~~~~~~~~~~~~~~~~~~~ape~~~~~~---------~~~~~Dv~slG~il~~l~~g~~p~~~~ 209 (267)
T cd08229 155 FFSSKTTAAHSLVGTPYYMSPERIHENG---------YNFKSDIWSLGCLLYEMAALQSPFYGD 209 (267)
T ss_pred ccccCCcccccccCCcCccCHHHhcCCC---------ccchhhHHHHHHHHHHHHhCCCCcccc
Confidence 65322 22346788899999875433 478999999999999999999999543
No 222
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=99.97 E-value=2.2e-31 Score=278.96 Aligned_cols=195 Identities=20% Similarity=0.324 Sum_probs=166.2
Q ss_pred CCCccceeecCCcceEEEEEEcCCcEEEEEEeeccccC-------HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEE
Q 004248 535 DFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVK-------TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFL 607 (766)
Q Consensus 535 ~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~-------~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~l 607 (766)
+|...+.||+|+||.||+|...+|+.+|||.++..... .+.+.+|++++++++|+||+++++++.+ .+..++
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~l 79 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLD-DNTISI 79 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeec-CCeEEE
Confidence 46778999999999999999888999999998653211 2468899999999999999999998876 568999
Q ss_pred EEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhh
Q 004248 608 VYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEV 687 (766)
Q Consensus 608 V~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a 687 (766)
||||+++|+|.+++.+.. .+++..+..++.|++.||+|||+. +|+|+||||+||++++++.+||+|||++
T Consensus 80 v~e~~~~~~L~~~l~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~ 149 (265)
T cd06631 80 FMEFVPGGSISSILNRFG-------PLPEPVFCKYTKQILDGVAYLHNN---CVVHRDIKGNNVMLMPNGIIKLIDFGCA 149 (265)
T ss_pred EEecCCCCcHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHhEEECCCCeEEeccchhh
Confidence 999999999999997543 378999999999999999999987 8999999999999999999999999998
Q ss_pred hhcCC---------CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 688 CAQGG---------DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 688 ~~~~~---------~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
+.... ......++..|+|||...... ++.++|||||||++|||+||+.||...
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~---------~~~~~Dv~slG~~~~~l~~g~~p~~~~ 211 (265)
T cd06631 150 RRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINESG---------YGRKSDIWSIGCTVFEMATGKPPLASM 211 (265)
T ss_pred HhhhhccccccccccccccCCCccccChhhhcCCC---------CcchhhHHHHHHHHHHHHhCCCccccC
Confidence 75421 112345678899999875443 468999999999999999999999543
No 223
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=99.97 E-value=1.6e-31 Score=278.90 Aligned_cols=189 Identities=19% Similarity=0.300 Sum_probs=156.3
Q ss_pred eeecCCcceEEEEEEc---CCcEEEEEEeeccccC--HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEeeCCCC
Q 004248 541 LIKNGHSGDLFRGILE---GGIPVVIKRIDLQSVK--TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNG 615 (766)
Q Consensus 541 ~ig~G~~g~Vy~~~~~---~g~~vavK~l~~~~~~--~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey~~~G 615 (766)
.||+|+||.||+|... ++..||+|.+...... .++|.+|++++++++||||+++++++. .+..++||||+++|
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~--~~~~~lv~e~~~~~ 79 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE--AEALMLVMEMASGG 79 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc--CCCeEEEEEeCCCC
Confidence 3899999999999753 4567999998654332 467999999999999999999999764 34689999999999
Q ss_pred ChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcCCCCc
Q 004248 616 DLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAH 695 (766)
Q Consensus 616 sL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~~~~~ 695 (766)
+|.+++.... ..+++.++.+++.|++.||+|||+. +++||||||+||+++.++.+||+|||+++.......
T Consensus 80 ~L~~~l~~~~------~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~ 150 (257)
T cd05115 80 PLNKFLSGKK------DEITVSNVVELMHQVSMGMKYLEGK---NFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDS 150 (257)
T ss_pred CHHHHHHhCC------CCCCHHHHHHHHHHHHHHHHHHHhc---CeeecccchheEEEcCCCcEEeccCCccccccCCcc
Confidence 9999987533 2489999999999999999999997 999999999999999999999999999975532211
Q ss_pred ------cceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCCC
Q 004248 696 ------QSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLSS 749 (766)
Q Consensus 696 ------~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~~ 749 (766)
...++..|+|||...... ++.++|||||||++||+++ |+.||...
T Consensus 151 ~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~Di~slG~~l~el~~~g~~p~~~~ 202 (257)
T cd05115 151 YYKARSAGKWPLKWYAPECINFRK---------FSSRSDVWSYGITMWEAFSYGQKPYKKM 202 (257)
T ss_pred ceeccCCCCCCcccCCHHHHccCC---------CCchhhHHHHHHHHHHHhcCCCCCcCcC
Confidence 112245799999875443 4679999999999999996 99999543
No 224
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.97 E-value=1.4e-31 Score=283.91 Aligned_cols=206 Identities=17% Similarity=0.257 Sum_probs=168.9
Q ss_pred CCCCccceeecCCcceEEEEEEc-CCcEEEEEEeecccc--CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEe
Q 004248 534 GDFSDANLIKNGHSGDLFRGILE-GGIPVVIKRIDLQSV--KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYK 610 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~E 610 (766)
++|+..+.||+|+||.||+|... +|+.||+|.+..... ..+++.+|++++++++||||+++++.+.. ++..|+|||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~~lv~e 79 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFI-EGAVYMCME 79 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheec-CCeEEEEEe
Confidence 35788899999999999999964 789999999865322 24579999999999999999999997765 578999999
Q ss_pred eCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhc
Q 004248 611 YMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQ 690 (766)
Q Consensus 611 y~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~ 690 (766)
|+++++|.+++..... ...+++..+..++.|++.||+|||+. .+|+||||||+||+++.++.+||+|||+++..
T Consensus 80 ~~~~~~l~~~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~LH~~--~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 153 (286)
T cd06622 80 YMDAGSLDKLYAGGVA----TEGIPEDVLRRITYAVVKGLKFLKEE--HNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNL 153 (286)
T ss_pred ecCCCCHHHHHHhccc----cCCCCHHHHHHHHHHHHHHHHHHHhc--CCEeeCCCCHHHEEECCCCCEEEeecCCcccc
Confidence 9999999998875321 13589999999999999999999963 38999999999999999999999999998765
Q ss_pred CC-CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 691 GG-DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 691 ~~-~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
.. ......++..|+|||.......+.. ..++.++|||||||++|||+||+.||...
T Consensus 154 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~---~~~~~~~DiwslG~il~~l~~g~~pf~~~ 210 (286)
T cd06622 154 VASLAKTNIGCQSYMAPERIKSGGPNQN---PTYTVQSDVWSLGLSILEMALGRYPYPPE 210 (286)
T ss_pred cCCccccCCCccCccCcchhcCCCCCcc---CCCCcccchHhHHHHHHHHHhCCCCCCCc
Confidence 32 2333456788999998754332100 11578999999999999999999999543
No 225
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=99.97 E-value=1.3e-31 Score=279.84 Aligned_cols=198 Identities=21% Similarity=0.366 Sum_probs=169.2
Q ss_pred hCCCCccceeecCCcceEEEEEEcCCcEEEEEEeeccccCHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEeeC
Q 004248 533 TGDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYM 612 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey~ 612 (766)
.++|...++||+|+||.||+|..++++.||||.+.......+++.+|++++++++||||+++++++.. +...++||||+
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~~v~e~~ 83 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTMSPEAFLQEAQIMKKLRHDKLVQLYAVCSE-EEPIYIVTEYM 83 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCccCHHHHHHHHHHHhhCCCCCEeeeeeeeec-CCceEEEEecc
Confidence 35688889999999999999998888899999998666667789999999999999999999997754 56799999999
Q ss_pred CCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcCC
Q 004248 613 PNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGG 692 (766)
Q Consensus 613 ~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~~ 692 (766)
++|+|.+++.+... ..+++.++..++.|++.|++|||+. +|+||||||+||++++++.+|++|||.++....
T Consensus 84 ~~~~L~~~i~~~~~-----~~~~~~~~~~~~~~i~~al~~lh~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~ 155 (261)
T cd05034 84 SKGSLLDFLKSGEG-----KKLRLPQLVDMAAQIAEGMAYLESR---NYIHRDLAARNILVGENLVCKIADFGLARLIED 155 (261)
T ss_pred CCCCHHHHHhcccc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcchheEEEcCCCCEEECccccceeccc
Confidence 99999999976432 3489999999999999999999997 899999999999999999999999999876532
Q ss_pred CC----ccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCC
Q 004248 693 DA----HQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLS 748 (766)
Q Consensus 693 ~~----~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~ 748 (766)
.. .....+..|+|||...... ++.++||||+||++|||+| |+.||..
T Consensus 156 ~~~~~~~~~~~~~~y~~PE~~~~~~---------~~~~~Di~slG~il~~l~t~g~~p~~~ 207 (261)
T cd05034 156 DEYTAREGAKFPIKWTAPEAANYGR---------FTIKSDVWSFGILLTEIVTYGRVPYPG 207 (261)
T ss_pred hhhhhhhccCCCccccCHHHhccCC---------cCchhHHHHHHHHHHHHHhCCCCCCCC
Confidence 21 1122345799999775443 4789999999999999999 9999854
No 226
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=99.97 E-value=1.6e-31 Score=283.29 Aligned_cols=194 Identities=21% Similarity=0.351 Sum_probs=162.1
Q ss_pred CCCccceeecCCcceEEEEEE-----cCCcEEEEEEeeccccC--HHHHHHHHHHHhhcCCCCcccceeEEEec-CCcEE
Q 004248 535 DFSDANLIKNGHSGDLFRGIL-----EGGIPVVIKRIDLQSVK--TEAYLLELDFFSKVSHARLVPLLGHCMER-ENEKF 606 (766)
Q Consensus 535 ~~~~~~~ig~G~~g~Vy~~~~-----~~g~~vavK~l~~~~~~--~~~~~~E~~~l~~l~H~niv~l~~~~~~~-~~~~~ 606 (766)
.|+..+.||+|+||.||+|+. .++..||+|.++..... .+.+.+|++++++++||||+++++++... ....+
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIK 84 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceE
Confidence 467889999999999999973 35789999998654322 45799999999999999999999987653 24689
Q ss_pred EEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchh
Q 004248 607 LVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSE 686 (766)
Q Consensus 607 lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~ 686 (766)
+||||+++|+|.+++.+.. ..++|.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 85 lv~e~~~g~~L~~~l~~~~------~~~~~~~~~~i~~~i~~aL~~lH~~---gi~H~dlkp~Nil~~~~~~~~l~dfg~ 155 (284)
T cd05079 85 LIMEFLPSGSLKEYLPRNK------NKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGL 155 (284)
T ss_pred EEEEccCCCCHHHHHHhcc------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccchheEEEcCCCCEEECCCcc
Confidence 9999999999999996542 2489999999999999999999997 999999999999999999999999999
Q ss_pred hhhcCCCC------ccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCC
Q 004248 687 VCAQGGDA------HQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLN 746 (766)
Q Consensus 687 a~~~~~~~------~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~ 746 (766)
++...... ....++..|+|||...... ++.++|||||||++|||+|++.|.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~---------~~~~~Di~slG~il~ellt~~~~~ 212 (284)
T cd05079 156 TKAIETDKEYYTVKDDLDSPVFWYAPECLIQSK---------FYIASDVWSFGVTLYELLTYCDSE 212 (284)
T ss_pred ccccccCccceeecCCCCCCccccCHHHhccCC---------CCccccchhhhhhhhhhhcCCCCC
Confidence 98653221 1233456799999775433 478999999999999999988765
No 227
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=99.97 E-value=2.3e-31 Score=278.77 Aligned_cols=200 Identities=20% Similarity=0.262 Sum_probs=168.8
Q ss_pred CCCCccceeecCCcceEEEEEEc-CCcEEEEEEeecccc----CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGILE-GGIPVVIKRIDLQSV----KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLV 608 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~----~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV 608 (766)
++|+..+.||+|+||.||+|... +|+.||+|.++.... ..+++.+|++++++++|+||+++++++.. ++..++|
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~-~~~~~lv 80 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIE-NNELNIV 80 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeec-CCeEEEE
Confidence 57889999999999999999964 899999998864221 25679999999999999999999998766 5689999
Q ss_pred EeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhh
Q 004248 609 YKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVC 688 (766)
Q Consensus 609 ~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~ 688 (766)
|||+++|+|.+++..... ....+++.++..++.|+++||+|||+. +|+||||||+||++++++.+||+|||+++
T Consensus 81 ~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~nil~~~~~~~~l~d~~~~~ 154 (267)
T cd08224 81 LELADAGDLSRMIKHFKK---QKRLIPERTIWKYFVQLCSALEHMHSK---RIMHRDIKPANVFITATGVVKLGDLGLGR 154 (267)
T ss_pred EecCCCCCHHHHHHHhcc---cCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecCCcChhhEEECCCCcEEEeccceee
Confidence 999999999999864321 123589999999999999999999997 99999999999999999999999999987
Q ss_pred hcCCC---CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 689 AQGGD---AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 689 ~~~~~---~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
..... .....++..|.|||...... ++.++|||||||++|||++|+.||...
T Consensus 155 ~~~~~~~~~~~~~~~~~y~apE~~~~~~---------~~~~~Di~slG~il~~l~~g~~p~~~~ 209 (267)
T cd08224 155 FFSSKTTAAHSLVGTPYYMSPERIHENG---------YNFKSDIWSLGCLLYEMAALQSPFYGD 209 (267)
T ss_pred eccCCCcccceecCCccccCHHHhccCC---------CCchhcHHHHHHHHHHHHHCCCCcccC
Confidence 65322 22345678899999875433 478999999999999999999998544
No 228
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=99.97 E-value=1.3e-31 Score=286.53 Aligned_cols=198 Identities=21% Similarity=0.279 Sum_probs=164.7
Q ss_pred CCCCccceeecCCcceEEEEEE------cCCcEEEEEEeeccccC--HHHHHHHHHHHhhc-CCCCcccceeEEEecCCc
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL------EGGIPVVIKRIDLQSVK--TEAYLLELDFFSKV-SHARLVPLLGHCMERENE 604 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~------~~g~~vavK~l~~~~~~--~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~ 604 (766)
++|...+.||+|+||.||+|.. .++..||||.++..... .+.+.+|+++++++ +||||+++++++.. .+.
T Consensus 35 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~-~~~ 113 (302)
T cd05055 35 NNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTI-GGP 113 (302)
T ss_pred HHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEec-CCc
Confidence 4688889999999999999973 23568999998654322 45799999999999 79999999998765 567
Q ss_pred EEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccc
Q 004248 605 KFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684 (766)
Q Consensus 605 ~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DF 684 (766)
.|+||||+++|+|.+++++... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+|++||
T Consensus 114 ~~lv~e~~~~~~L~~~i~~~~~-----~~l~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~df 185 (302)
T cd05055 114 ILVITEYCCYGDLLNFLRRKRE-----SFLTLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNVLLTHGKIVKICDF 185 (302)
T ss_pred eEEEEEcCCCCcHHHHHHhCCC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeehhhhccceEEEcCCCeEEECCC
Confidence 9999999999999999975432 2389999999999999999999987 9999999999999999999999999
Q ss_pred hhhhhcCCCCc-----cceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCCC
Q 004248 685 SEVCAQGGDAH-----QSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLSS 749 (766)
Q Consensus 685 G~a~~~~~~~~-----~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~~ 749 (766)
|+++....... ...++..|+|||...... ++.++|||||||++|||+| |+.||...
T Consensus 186 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~DiwslGvil~el~t~g~~p~~~~ 247 (302)
T cd05055 186 GLARDIMNDSNYVVKGNARLPVKWMAPESIFNCV---------YTFESDVWSYGILLWEIFSLGSNPYPGM 247 (302)
T ss_pred cccccccCCCceeecCCCCcccccCCHhhhccCC---------CCcHhHHHHHHHHHHHHHhCCCCCcCCC
Confidence 99976532211 123456799999875443 4789999999999999998 99998543
No 229
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.97 E-value=9.7e-32 Score=284.86 Aligned_cols=197 Identities=18% Similarity=0.233 Sum_probs=167.5
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC--HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEe
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK--TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYK 610 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~--~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~E 610 (766)
++|+..+.||+|+||+||+|.. ++|+.||+|.+...... .+++.+|++++++++||||+++++++.. .+..++|||
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e 83 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLN-ENNICMCME 83 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEec-CCEEEEEEe
Confidence 4577789999999999999984 57899999988654322 5689999999999999999999998876 568999999
Q ss_pred eCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhc
Q 004248 611 YMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQ 690 (766)
Q Consensus 611 y~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~ 690 (766)
|+++|+|.+++.+.+ .+++.....++.+++.||.|||+. .+|+||||||+||++++++.++|+|||++...
T Consensus 84 ~~~~~~L~~~~~~~~-------~~~~~~~~~~~~~i~~~l~~LH~~--~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~ 154 (284)
T cd06620 84 FMDCGSLDRIYKKGG-------PIPVEILGKIAVAVVEGLTYLYNV--HRIMHRDIKPSNILVNSRGQIKLCDFGVSGEL 154 (284)
T ss_pred cCCCCCHHHHHHhcc-------CCCHHHHHHHHHHHHHHHHHHHHh--cCeeccCCCHHHEEECCCCcEEEccCCcccch
Confidence 999999999987543 389999999999999999999963 27999999999999999999999999998654
Q ss_pred CC-CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 691 GG-DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 691 ~~-~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
.. ......++..|+|||.+.... .+.++|||||||++|||+||+.||...
T Consensus 155 ~~~~~~~~~~~~~~~aPE~~~~~~---------~~~~~Di~slG~~l~~l~tg~~p~~~~ 205 (284)
T cd06620 155 INSIADTFVGTSTYMSPERIQGGK---------YTVKSDVWSLGISIIELALGKFPFAFS 205 (284)
T ss_pred hhhccCccccCcccCCHHHHccCC---------CCccchHHHHHHHHHHHHhCCCCCccc
Confidence 22 223346788999999875443 478999999999999999999999643
No 230
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=99.97 E-value=1.9e-31 Score=279.21 Aligned_cols=190 Identities=22% Similarity=0.289 Sum_probs=155.3
Q ss_pred ceeecCCcceEEEEEEcC-------------CcEEEEEEeeccccC-HHHHHHHHHHHhhcCCCCcccceeEEEecCCcE
Q 004248 540 NLIKNGHSGDLFRGILEG-------------GIPVVIKRIDLQSVK-TEAYLLELDFFSKVSHARLVPLLGHCMERENEK 605 (766)
Q Consensus 540 ~~ig~G~~g~Vy~~~~~~-------------g~~vavK~l~~~~~~-~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 605 (766)
+.||+|+||.||+|+..+ ...||+|.+...... ...|.+|+.++++++|||||++++++.. +...
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~-~~~~ 79 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVR-DVEN 79 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCCC
Confidence 468999999999998532 236899987654333 4578999999999999999999998876 4678
Q ss_pred EEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCc-------
Q 004248 606 FLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFE------- 678 (766)
Q Consensus 606 ~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~------- 678 (766)
++||||+++|+|..+++++. ..+++..+..++.||+.||+|||+. +|+||||||+|||++.++.
T Consensus 80 ~lv~e~~~~~~l~~~~~~~~------~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~~~~~~~ 150 (262)
T cd05077 80 IMVEEFVEFGPLDLFMHRKS------DVLTTPWKFKVAKQLASALSYLEDK---DLVHGNVCTKNILLAREGIDGECGPF 150 (262)
T ss_pred EEEEecccCCCHHHHHHhcC------CCCCHHHHHHHHHHHHHHHHHhhhC---CeECCCCCcccEEEecCCccCCCCce
Confidence 99999999999999887543 2489999999999999999999997 9999999999999987664
Q ss_pred EEeccchhhhhcCCCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHh-cCCCCCCC
Q 004248 679 VRLGSLSEVCAQGGDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAI-FNNHLNLS 748 (766)
Q Consensus 679 ~kl~DFG~a~~~~~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ell-tG~~p~~~ 748 (766)
+|++|||++...... ....++..|+|||....... ++.++|||||||++|||+ +|+.|+..
T Consensus 151 ~~l~d~g~~~~~~~~-~~~~~~~~y~aPE~~~~~~~--------~~~~~DiwslG~~l~el~~~~~~p~~~ 212 (262)
T cd05077 151 IKLSDPGIPITVLSR-QECVERIPWIAPECVEDSKN--------LSIAADKWSFGTTLWEICYNGEIPLKD 212 (262)
T ss_pred eEeCCCCCCccccCc-ccccccccccChhhhcCCCC--------CCchhHHHHHHHHHHHHHhCCCCCCCC
Confidence 899999998755322 23346778999997753221 578999999999999998 58888754
No 231
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=99.97 E-value=2.6e-31 Score=276.73 Aligned_cols=197 Identities=19% Similarity=0.248 Sum_probs=168.1
Q ss_pred CCCccceeecCCcceEEEEE-EcCCcEEEEEEeecccc---CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEe
Q 004248 535 DFSDANLIKNGHSGDLFRGI-LEGGIPVVIKRIDLQSV---KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYK 610 (766)
Q Consensus 535 ~~~~~~~ig~G~~g~Vy~~~-~~~g~~vavK~l~~~~~---~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~E 610 (766)
+|+..++||+|+||.||.++ ..+++.||+|++..... ..+++.+|++++++++|+||+++++++.+ ++..++|||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~~~~~e 79 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMD-DNTLLIEME 79 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEec-CCeEEEEEE
Confidence 47888999999999999998 46789999999865432 24678999999999999999999998776 568999999
Q ss_pred eCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhc
Q 004248 611 YMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQ 690 (766)
Q Consensus 611 y~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~ 690 (766)
|+++|+|.+++.+... ..+++.++..++.|++.||+|||+. +++||||||+||++++++.+||+|||+++..
T Consensus 80 ~~~~~~L~~~~~~~~~-----~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~ 151 (256)
T cd08221 80 YANGGTLYDKIVRQKG-----QLFEEEMVLWYLFQIVSAVSYIHKA---GILHRDIKTLNIFLTKAGLIKLGDFGISKIL 151 (256)
T ss_pred ecCCCcHHHHHHhccc-----cCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChHhEEEeCCCCEEECcCcceEEc
Confidence 9999999999975432 3489999999999999999999987 9999999999999999999999999998765
Q ss_pred CCC---CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 691 GGD---AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 691 ~~~---~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
... .....++..|.|||...... .+.++|||||||+++||++|+.||...
T Consensus 152 ~~~~~~~~~~~~~~~y~ape~~~~~~---------~~~~~Dv~slG~i~~~l~~g~~~~~~~ 204 (256)
T cd08221 152 GSEYSMAETVVGTPYYMSPELCQGVK---------YNFKSDIWALGCVLYELLTLKRTFDAT 204 (256)
T ss_pred ccccccccccCCCccccCHhhcCCCC---------CCCcchhHHHHHHHHHHHHCCCCCCCC
Confidence 322 23345788999999875443 467899999999999999999998543
No 232
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=99.97 E-value=1.5e-31 Score=282.97 Aligned_cols=203 Identities=17% Similarity=0.174 Sum_probs=163.7
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC--HHHHHHHHHH-HhhcCCCCcccceeEEEecCCcEEEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK--TEAYLLELDF-FSKVSHARLVPLLGHCMERENEKFLVY 609 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~--~~~~~~E~~~-l~~l~H~niv~l~~~~~~~~~~~~lV~ 609 (766)
++|+..+.||+|+||.||+|+. .+|+.||+|+++..... ..++..|+.+ ++..+|||||++++++.. ++..|+||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~-~~~~~lv~ 79 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFR-EGDVWICM 79 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEec-CCcEEEEh
Confidence 4788899999999999999995 56999999999764322 3456677775 566789999999998875 56799999
Q ss_pred eeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhh
Q 004248 610 KYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCA 689 (766)
Q Consensus 610 Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~ 689 (766)
||++ |+|.+++..... ....++|..+..++.|++.||+|||++ .+++||||||+||+++.++.+||+|||+++.
T Consensus 80 e~~~-~~l~~~l~~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~--~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~ 153 (283)
T cd06617 80 EVMD-TSLDKFYKKVYD---KGLTIPEDILGKIAVSIVKALEYLHSK--LSVIHRDVKPSNVLINRNGQVKLCDFGISGY 153 (283)
T ss_pred hhhc-ccHHHHHHHhcc---CCCCCCHHHHHHHHHHHHHHHHHHhhc--CCeecCCCCHHHEEECCCCCEEEeecccccc
Confidence 9997 689888865322 113589999999999999999999974 3799999999999999999999999999876
Q ss_pred cCCC--CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 690 QGGD--AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 690 ~~~~--~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
.... .....++..|+|||....... ... ++.++|||||||++|||++|+.||..
T Consensus 154 ~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~----~~~~~Di~slG~~l~~l~~g~~p~~~ 209 (283)
T cd06617 154 LVDSVAKTIDAGCKPYMAPERINPELN-QKG----YDVKSDVWSLGITMIELATGRFPYDS 209 (283)
T ss_pred cccccccccccCCccccChhhcCCccc-ccc----cCccccchhhHHHHHHHHhCCCCCCc
Confidence 5322 122457888999998754221 111 57899999999999999999999964
No 233
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=99.97 E-value=2e-31 Score=282.33 Aligned_cols=196 Identities=19% Similarity=0.317 Sum_probs=162.4
Q ss_pred CCCCccceeecCCcceEEEEEE-----cCCcEEEEEEeeccccC-HHHHHHHHHHHhhcCCCCcccceeEEEec-CCcEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-----EGGIPVVIKRIDLQSVK-TEAYLLELDFFSKVSHARLVPLLGHCMER-ENEKF 606 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-----~~g~~vavK~l~~~~~~-~~~~~~E~~~l~~l~H~niv~l~~~~~~~-~~~~~ 606 (766)
++|+..+.||+|+||.||+|.. .++..||+|++...... .+.|.+|++++++++||||+++++++... ....+
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 83 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLR 83 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceE
Confidence 4678889999999999999974 35789999998654433 56789999999999999999999977543 34689
Q ss_pred EEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchh
Q 004248 607 LVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSE 686 (766)
Q Consensus 607 lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~ 686 (766)
+||||+++|+|.+++.+.+ ..++|.++..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+
T Consensus 84 lv~e~~~~~~L~~~l~~~~------~~l~~~~~~~~~~~l~~aL~~LH~~---~i~H~dlkp~nili~~~~~~~l~dfg~ 154 (284)
T cd05081 84 LVMEYLPYGSLRDYLQKHR------ERLDHRKLLLYASQICKGMEYLGSK---RYVHRDLATRNILVESENRVKIGDFGL 154 (284)
T ss_pred EEEEecCCCCHHHHHHhcC------cCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHhhEEECCCCeEEECCCcc
Confidence 9999999999999997543 2489999999999999999999997 999999999999999999999999999
Q ss_pred hhhcCCCCc------cceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCC
Q 004248 687 VCAQGGDAH------QSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNL 747 (766)
Q Consensus 687 a~~~~~~~~------~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~ 747 (766)
++....... ...++..|+|||...... ++.++|||||||++|||++|..|+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~Di~slG~~l~el~~~~~~~~ 212 (284)
T cd05081 155 TKVLPQDKEYYKVREPGESPIFWYAPESLTESK---------FSVASDVWSFGVVLYELFTYSDKSC 212 (284)
T ss_pred cccccCCCcceeecCCCCCceEeeCHHHhccCC---------cChHHHHHHHHHHHHHHhhcCCcCC
Confidence 986532211 112234689999875443 4689999999999999999987753
No 234
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=99.97 E-value=1.2e-31 Score=296.82 Aligned_cols=202 Identities=19% Similarity=0.295 Sum_probs=164.7
Q ss_pred CCCCccceeecCCcceEEEEEEc------CCcEEEEEEeeccccC--HHHHHHHHHHHhhcC-CCCcccceeEEEecCCc
Q 004248 534 GDFSDANLIKNGHSGDLFRGILE------GGIPVVIKRIDLQSVK--TEAYLLELDFFSKVS-HARLVPLLGHCMERENE 604 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~--~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~ 604 (766)
++|...+.||+|+||.||+|+.. .++.||||+++..... .+.+.+|+++|.++. |||||+++++|.. ++.
T Consensus 37 ~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~-~~~ 115 (401)
T cd05107 37 DNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTK-GGP 115 (401)
T ss_pred HHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEcc-CCC
Confidence 45777899999999999999853 3468999999754322 457899999999997 9999999998865 567
Q ss_pred EEEEEeeCCCCChhhhhhccCCC---------------------------------------------------------
Q 004248 605 KFLVYKYMPNGDLSSSLYRKTNT--------------------------------------------------------- 627 (766)
Q Consensus 605 ~~lV~Ey~~~GsL~~~l~~~~~~--------------------------------------------------------- 627 (766)
.++||||+++|+|.+++++.+..
T Consensus 116 ~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (401)
T cd05107 116 IYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDM 195 (401)
T ss_pred cEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhcc
Confidence 99999999999999999754210
Q ss_pred ----------------------------------CCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeee
Q 004248 628 ----------------------------------EDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILL 673 (766)
Q Consensus 628 ----------------------------------~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl 673 (766)
......++|.+...|+.|++.||+|||+. +|+||||||+|||+
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrdlkp~NiLl 272 (401)
T cd05107 196 KGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASK---NCVHRDLAARNVLI 272 (401)
T ss_pred hhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CcCcccCCcceEEE
Confidence 01123578999999999999999999987 99999999999999
Q ss_pred CCCCcEEeccchhhhhcCCC-----CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCC
Q 004248 674 DDKFEVRLGSLSEVCAQGGD-----AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNL 747 (766)
Q Consensus 674 ~~~~~~kl~DFG~a~~~~~~-----~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~ 747 (766)
++++.+||+|||+++..... .....++..|+|||...... ++.++|||||||++|||++ |+.||.
T Consensus 273 ~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~DvwslGvil~e~l~~g~~P~~ 343 (401)
T cd05107 273 CEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNL---------YTTLSDVWSFGILLWEIFTLGGTPYP 343 (401)
T ss_pred eCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCC---------CCcHhHHHHHHHHHHHHHHcCCCCCC
Confidence 99999999999999764211 11224567799999875543 4679999999999999998 888985
Q ss_pred C
Q 004248 748 S 748 (766)
Q Consensus 748 ~ 748 (766)
.
T Consensus 344 ~ 344 (401)
T cd05107 344 E 344 (401)
T ss_pred C
Confidence 3
No 235
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=3.7e-34 Score=275.86 Aligned_cols=212 Identities=19% Similarity=0.293 Sum_probs=175.9
Q ss_pred CCCCccceeecCCcceEEEEE-EcCCcEEEEEEeeccccC---HHHHHHHHHHHhhcCCCCcccceeEEEec-------C
Q 004248 534 GDFSDANLIKNGHSGDLFRGI-LEGGIPVVIKRIDLQSVK---TEAYLLELDFFSKVSHARLVPLLGHCMER-------E 602 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~---~~~~~~E~~~l~~l~H~niv~l~~~~~~~-------~ 602 (766)
+.|+...+||+|.||+||+|+ ..+|++||+|++-....+ ...-.+|+++|..++|+|++.++..|... .
T Consensus 17 ~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r 96 (376)
T KOG0669|consen 17 SKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDR 96 (376)
T ss_pred hHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCccccc
Confidence 346667899999999999998 667889999987543222 45678999999999999999999988532 1
Q ss_pred CcEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEec
Q 004248 603 NEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLG 682 (766)
Q Consensus 603 ~~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~ 682 (766)
...|+||++|+. ||..+|.... ..++..++++++.++..||.|+|+. .|+|||+||+|+||+.+|.+||+
T Consensus 97 ~t~ylVf~~ceh-DLaGlLsn~~------vr~sls~Ikk~Mk~Lm~GL~~iHr~---kilHRDmKaaNvLIt~dgilklA 166 (376)
T KOG0669|consen 97 ATFYLVFDFCEH-DLAGLLSNRK------VRFSLSEIKKVMKGLMNGLYYIHRN---KILHRDMKAANVLITKDGILKLA 166 (376)
T ss_pred ceeeeeHHHhhh-hHHHHhcCcc------ccccHHHHHHHHHHHHHHHHHHHHh---hHHhhcccHhhEEEcCCceEEee
Confidence 248999999996 9999986442 3589999999999999999999998 99999999999999999999999
Q ss_pred cchhhhhc-------CCCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCCcccccc
Q 004248 683 SLSEVCAQ-------GGDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSSRFGVKQ 755 (766)
Q Consensus 683 DFG~a~~~-------~~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~~~~~~~ 755 (766)
|||+|+.. ....+..+.|.+|++||.+.+... ++++.|||.-|||+.||.||. |...++.+.++
T Consensus 167 DFGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~--------yg~~iDiWgAgCimaeMwtrs-pimqgnteqqq 237 (376)
T KOG0669|consen 167 DFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDRE--------YGPPIDIWGAGCIMAEMWTRS-PIMQGNTEQQQ 237 (376)
T ss_pred ccccccceecccccCCCCcccceeeeecCCHHHhhcccc--------cCCcchhHhHHHHHHHHHccC-ccccCChHHHH
Confidence 99999765 223455678999999998876543 678999999999999999987 56667777777
Q ss_pred ceeeEEEEe
Q 004248 756 QTTIIKLCV 764 (766)
Q Consensus 756 ~~~~~~~~~ 764 (766)
+..|.++|.
T Consensus 238 l~~Is~LcG 246 (376)
T KOG0669|consen 238 LHLISQLCG 246 (376)
T ss_pred HHHHHHHhc
Confidence 777766653
No 236
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=99.97 E-value=1.5e-31 Score=282.03 Aligned_cols=190 Identities=21% Similarity=0.270 Sum_probs=154.3
Q ss_pred eeecCCcceEEEEEEcC-------------------------CcEEEEEEeeccccC-HHHHHHHHHHHhhcCCCCcccc
Q 004248 541 LIKNGHSGDLFRGILEG-------------------------GIPVVIKRIDLQSVK-TEAYLLELDFFSKVSHARLVPL 594 (766)
Q Consensus 541 ~ig~G~~g~Vy~~~~~~-------------------------g~~vavK~l~~~~~~-~~~~~~E~~~l~~l~H~niv~l 594 (766)
.||+|+||.||+|.... ...||+|.+...... .++|.+|++++++++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 58999999999997421 135899988654333 4578999999999999999999
Q ss_pred eeEEEecCCcEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeC
Q 004248 595 LGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLD 674 (766)
Q Consensus 595 ~~~~~~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~ 674 (766)
+++|.+ +...++||||+++|+|..++.+.. ..+++..+..++.|+++||+|||+. +|+||||||+||+++
T Consensus 82 ~~~~~~-~~~~~lv~ey~~~g~L~~~l~~~~------~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~Nill~ 151 (274)
T cd05076 82 HGVCVR-GSENIMVEEFVEHGPLDVCLRKEK------GRVPVAWKITVAQQLASALSYLEDK---NLVHGNVCAKNILLA 151 (274)
T ss_pred EEEEEe-CCceEEEEecCCCCcHHHHHHhcC------CCCCHHHHHHHHHHHHHHHHHHHcC---CccCCCCCcccEEEe
Confidence 998876 567899999999999999986533 2488999999999999999999987 999999999999998
Q ss_pred CCC-------cEEeccchhhhhcCCCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHh-cCCCCC
Q 004248 675 DKF-------EVRLGSLSEVCAQGGDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAI-FNNHLN 746 (766)
Q Consensus 675 ~~~-------~~kl~DFG~a~~~~~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ell-tG~~p~ 746 (766)
+++ .+|++|||.+...... ....++..|+|||.+..... ++.++|||||||++|||+ +|+.||
T Consensus 152 ~~~~~~~~~~~~kl~d~g~~~~~~~~-~~~~~~~~~~aPe~~~~~~~--------~~~~~Dv~slG~~l~el~~~g~~p~ 222 (274)
T cd05076 152 RLGLAEGTSPFIKLSDPGVSFTALSR-EERVERIPWIAPECVPGGNS--------LSTAADKWSFGTTLLEICFDGEVPL 222 (274)
T ss_pred ccCcccCccceeeecCCccccccccc-cccccCCcccCchhhcCCCC--------CCcHHHHHHHHHHHHHHHhCCCCCc
Confidence 654 3899999988654222 22345678999998754321 578999999999999994 799998
Q ss_pred CCC
Q 004248 747 LSS 749 (766)
Q Consensus 747 ~~~ 749 (766)
...
T Consensus 223 ~~~ 225 (274)
T cd05076 223 KER 225 (274)
T ss_pred ccc
Confidence 543
No 237
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=99.97 E-value=1.9e-31 Score=281.82 Aligned_cols=205 Identities=20% Similarity=0.297 Sum_probs=168.7
Q ss_pred hCCCCccceeecCCcceEEEEEEcC-----CcEEEEEEeecccc--CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcE
Q 004248 533 TGDFSDANLIKNGHSGDLFRGILEG-----GIPVVIKRIDLQSV--KTEAYLLELDFFSKVSHARLVPLLGHCMERENEK 605 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~~~~-----g~~vavK~l~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 605 (766)
.++|...++||+|+||.||+|.... +..||+|++..... ..+.+.+|+.++++++||||+++++++...+...
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~ 84 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPP 84 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCC
Confidence 3568888999999999999999654 78899999864322 2567899999999999999999999887755678
Q ss_pred EEEEeeCCCCChhhhhhccCCC-CCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccc
Q 004248 606 FLVYKYMPNGDLSSSLYRKTNT-EDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684 (766)
Q Consensus 606 ~lV~Ey~~~GsL~~~l~~~~~~-~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DF 684 (766)
++++||+++|+|.+++...... ......+++.++..++.|++.||+|||+. +++||||||+||++++++.+||+||
T Consensus 85 ~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kl~d~ 161 (280)
T cd05043 85 FVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKR---GVIHKDIAARNCVIDEELQVKITDN 161 (280)
T ss_pred EEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCHhhEEEcCCCcEEECCC
Confidence 9999999999999999754321 11224589999999999999999999987 9999999999999999999999999
Q ss_pred hhhhhcCCCC-----ccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCCC
Q 004248 685 SEVCAQGGDA-----HQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLSS 749 (766)
Q Consensus 685 G~a~~~~~~~-----~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~~ 749 (766)
|+++...... ....++..|+|||...... ++.++|||||||++||+++ |+.||...
T Consensus 162 g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~---------~~~~~Di~slG~~l~el~~~g~~p~~~~ 223 (280)
T cd05043 162 ALSRDLFPMDYHCLGDNENRPVKWMALESLVNKE---------YSSASDVWSFGVLLWELMTLGQTPYVEI 223 (280)
T ss_pred CCcccccCCceEEeCCCCCcchhccCHHHHhcCC---------CCchhhHHHhHHHHHHHhcCCCCCcCcC
Confidence 9998652211 1223456799999875433 4789999999999999999 99999643
No 238
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=99.97 E-value=1.9e-31 Score=279.95 Aligned_cols=197 Identities=21% Similarity=0.377 Sum_probs=163.0
Q ss_pred CCCCccceeecCCcceEEEEEEc-CC---cEEEEEEeecccc--CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGILE-GG---IPVVIKRIDLQSV--KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFL 607 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~~-~g---~~vavK~l~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~l 607 (766)
++|+..+.||+|+||.||+|+.. ++ ..||+|+++.... ..+++.+|++++++++||||+++++++.. .+..|+
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~l 83 (268)
T cd05063 5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTK-FKPAMI 83 (268)
T ss_pred HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEcc-CCCcEE
Confidence 46778899999999999999954 33 3799999865432 25679999999999999999999997765 567899
Q ss_pred EEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhh
Q 004248 608 VYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEV 687 (766)
Q Consensus 608 V~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a 687 (766)
||||+++|+|.+++..+.. .++|.++..++.|++.|++|||+. +|+||||||+||++++++.+|++|||++
T Consensus 84 v~e~~~~~~L~~~~~~~~~------~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~ 154 (268)
T cd05063 84 ITEYMENGALDKYLRDHDG------EFSSYQLVGMLRGIAAGMKYLSDM---NYVHRDLAARNILVNSNLECKVSDFGLS 154 (268)
T ss_pred EEEcCCCCCHHHHHHhcCC------CCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEEcCCCcEEECCCccc
Confidence 9999999999999975432 489999999999999999999987 9999999999999999999999999998
Q ss_pred hhcCCCCcc------ceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCCC
Q 004248 688 CAQGGDAHQ------SRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLSS 749 (766)
Q Consensus 688 ~~~~~~~~~------~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~~ 749 (766)
+........ ...+..|+|||...... ++.++|||||||++|||+| |+.||...
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~---------~~~~~Dv~slG~il~ell~~g~~p~~~~ 214 (268)
T cd05063 155 RVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRK---------FTSASDVWSFGIVMWEVMSFGERPYWDM 214 (268)
T ss_pred eecccccccceeccCCCcCceecCHHHhhcCC---------cChHhHHHHHHHHHHHHHhCCCCCCCcC
Confidence 765322111 11234699999875443 4789999999999999998 99999543
No 239
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=99.97 E-value=1.4e-31 Score=284.39 Aligned_cols=204 Identities=19% Similarity=0.270 Sum_probs=164.4
Q ss_pred HhCCCCccceeecCCcceEEEEEEc------CCcEEEEEEeeccccC--HHHHHHHHHHHhhcCCCCcccceeEEEecCC
Q 004248 532 ATGDFSDANLIKNGHSGDLFRGILE------GGIPVVIKRIDLQSVK--TEAYLLELDFFSKVSHARLVPLLGHCMEREN 603 (766)
Q Consensus 532 ~~~~~~~~~~ig~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~--~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~ 603 (766)
..++|+..++||+|+||.||+|... .+..||+|.+...... ..++.+|++++++++||||+++++++.+ .+
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~ 82 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSK-GQ 82 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcC-CC
Confidence 3567889999999999999999742 2558999988644322 3468899999999999999999997765 46
Q ss_pred cEEEEEeeCCCCChhhhhhccCCCC---CcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEE
Q 004248 604 EKFLVYKYMPNGDLSSSLYRKTNTE---DDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVR 680 (766)
Q Consensus 604 ~~~lV~Ey~~~GsL~~~l~~~~~~~---~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~k 680 (766)
..|+||||+++|+|.+++.+..... ......++..+..++.|++.||+|||+. +|+||||||+||++++++.+|
T Consensus 83 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dikp~nili~~~~~~~ 159 (288)
T cd05061 83 PTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVK 159 (288)
T ss_pred CcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCCChheEEEcCCCcEE
Confidence 7899999999999999997533211 1123467888999999999999999987 999999999999999999999
Q ss_pred eccchhhhhcCCCC-----ccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCC
Q 004248 681 LGSLSEVCAQGGDA-----HQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLS 748 (766)
Q Consensus 681 l~DFG~a~~~~~~~-----~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~ 748 (766)
++|||+++...... ....++..|+|||....+. ++.++|||||||++|||++ |+.||..
T Consensus 160 L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~---------~~~~~DvwslG~~l~el~~~~~~p~~~ 224 (288)
T cd05061 160 IGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGV---------FTTSSDMWSFGVVLWEITSLAEQPYQG 224 (288)
T ss_pred ECcCCccccccccccccccCCCcccccccCHHHhccCC---------CChHhHHHHHHHHHHHHHhCCCCCCCC
Confidence 99999987542211 1123355799999876443 4789999999999999999 7888854
No 240
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=99.97 E-value=3.8e-31 Score=276.31 Aligned_cols=200 Identities=20% Similarity=0.258 Sum_probs=169.3
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeecccc-CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEee
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV-KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKY 611 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey 611 (766)
++|+..+.||+|+||.||+|.. .+++.+|+|.+..... ..+.+.+|++++++++||||+++++++.. ++..|++|||
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~~l~~e~ 81 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLR-RDKLWIVMEY 81 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEe-CCEEEEEEeC
Confidence 5788899999999999999985 5688999999875443 35679999999999999999999997765 5689999999
Q ss_pred CCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcC
Q 004248 612 MPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQG 691 (766)
Q Consensus 612 ~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~ 691 (766)
+++++|.+++.... ..+++.++..++.|++.||+|||+. +|+||||||+||++++++.+||+|||.+....
T Consensus 82 ~~~~~l~~~~~~~~------~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~ 152 (262)
T cd06613 82 CGGGSLQDIYQVTR------GPLSELQIAYVCRETLKGLAYLHET---GKIHRDIKGANILLTEDGDVKLADFGVSAQLT 152 (262)
T ss_pred CCCCcHHHHHHhhc------cCCCHHHHHHHHHHHHHHHHHHHhC---CceecCCChhhEEECCCCCEEECccccchhhh
Confidence 99999999987542 2489999999999999999999987 99999999999999999999999999987653
Q ss_pred CC---CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 692 GD---AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 692 ~~---~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
.. .....++..|+|||.......+. ++.++|||||||++|||+||+.||...
T Consensus 153 ~~~~~~~~~~~~~~y~~Pe~~~~~~~~~------~~~~~Di~slG~~l~~~~tg~~p~~~~ 207 (262)
T cd06613 153 ATIAKRKSFIGTPYWMAPEVAAVERKGG------YDGKCDIWALGITAIELAELQPPMFDL 207 (262)
T ss_pred hhhhccccccCCccccCchhhcccccCC------cCchhhhHHHHHHHHHHHhCCCCCCCC
Confidence 22 23345677899999876542111 578999999999999999999999643
No 241
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=99.97 E-value=1e-31 Score=284.75 Aligned_cols=196 Identities=17% Similarity=0.222 Sum_probs=165.2
Q ss_pred CCCCccceeecCCcceEEEEEEc-CCcEEEEEEeecccc---CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGILE-GGIPVVIKRIDLQSV---KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVY 609 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~---~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~ 609 (766)
++|+..++||+|+||.||+|... +++.||+|++..... ..+.+.+|++++++++||||+++++++.. ++..|+||
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~ 79 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRR-KKRLYLVF 79 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhccc-CCeEEEEE
Confidence 46888899999999999999964 689999998854332 24578899999999999999999997765 56899999
Q ss_pred eeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhh
Q 004248 610 KYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCA 689 (766)
Q Consensus 610 Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~ 689 (766)
||+++++|.++..... .++|.++..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.
T Consensus 80 e~~~~~~l~~~~~~~~-------~~~~~~~~~~~~~i~~~l~~LH~~---~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~ 149 (286)
T cd07846 80 EFVDHTVLDDLEKYPN-------GLDESRVRKYLFQILRGIEFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFART 149 (286)
T ss_pred ecCCccHHHHHHhccC-------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCcEEEEeeeeeee
Confidence 9999999988775432 389999999999999999999997 999999999999999999999999999876
Q ss_pred cCCC---CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 690 QGGD---AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 690 ~~~~---~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
.... .....++..|+|||....... ++.++|||||||++|||+||++||..
T Consensus 150 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~--------~~~~~Dv~slG~~l~el~~g~~~~~~ 203 (286)
T cd07846 150 LAAPGEVYTDYVATRWYRAPELLVGDTK--------YGRAVDIWAVGCLVTEMLTGEPLFPG 203 (286)
T ss_pred ccCCccccCcccceeeccCcHHhccccc--------cCchHhHHHHHHHHHHHHcCCCCCCC
Confidence 5322 223457889999998754221 46799999999999999999988853
No 242
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=99.97 E-value=3.4e-31 Score=277.79 Aligned_cols=197 Identities=20% Similarity=0.269 Sum_probs=164.9
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeecccc------CHHHHHHHHHHHhhcCCCCcccceeEEEec-CCcE
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV------KTEAYLLELDFFSKVSHARLVPLLGHCMER-ENEK 605 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~------~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-~~~~ 605 (766)
.+|+..+.||+|+||.||+|.. .+++.||+|++..... ..+.+.+|++++++++||||+++++++... ++..
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 3688899999999999999985 5689999999864321 134688999999999999999999976542 3467
Q ss_pred EEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccch
Q 004248 606 FLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLS 685 (766)
Q Consensus 606 ~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG 685 (766)
++++||+++++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 82 ~l~~e~~~~~~L~~~l~~~~-------~l~~~~~~~~~~qi~~~l~~LH~~---~i~H~~l~p~nil~~~~~~~~l~dfg 151 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKAYG-------ALTESVTRKYTRQILEGMSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFG 151 (266)
T ss_pred EEEEeCCCCCcHHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccCC
Confidence 89999999999999997543 388999999999999999999987 99999999999999999999999999
Q ss_pred hhhhcCCC------CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 686 EVCAQGGD------AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 686 ~a~~~~~~------~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
+++..... .....++..|+|||...... .+.++|||||||++|||+||+.||...
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~Dv~slG~i~~el~~g~~pf~~~ 212 (266)
T cd06651 152 ASKRLQTICMSGTGIRSVTGTPYWMSPEVISGEG---------YGRKADVWSLGCTVVEMLTEKPPWAEY 212 (266)
T ss_pred CccccccccccCCccccCCccccccCHHHhCCCC---------CCchhhhHHHHHHHHHHHHCCCCcccc
Confidence 98754221 12234677899999875443 468999999999999999999999543
No 243
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.4e-32 Score=280.79 Aligned_cols=196 Identities=16% Similarity=0.191 Sum_probs=166.9
Q ss_pred CCCCccceeecCCcceEEEEEEc-CCcEEEEEEeeccccC----HHHHHHHHHHHhhc-CCCCcccceeEEEecCCcEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGILE-GGIPVVIKRIDLQSVK----TEAYLLELDFFSKV-SHARLVPLLGHCMERENEKFL 607 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~----~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~~l 607 (766)
.+|....+||+|+||+|..|..+ +.+.+|||+++++-.- .+--..|-++|+-. +-|.+|+++. |+++.+.+|+
T Consensus 349 tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHS-cFQTmDRLyF 427 (683)
T KOG0696|consen 349 TDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHS-CFQTMDRLYF 427 (683)
T ss_pred cccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHH-Hhhhhhheee
Confidence 36888999999999999999854 5778999999765432 22234566777655 5789999997 6666788999
Q ss_pred EEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhh
Q 004248 608 VYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEV 687 (766)
Q Consensus 608 V~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a 687 (766)
||||+.||||.-+|++.+. +.++..+.+|.+||-||-|||++ +||.||||..||++|.+|++||+|||++
T Consensus 428 VMEyvnGGDLMyhiQQ~Gk-------FKEp~AvFYAaEiaigLFFLh~k---gIiYRDLKLDNvmLd~eGHiKi~DFGmc 497 (683)
T KOG0696|consen 428 VMEYVNGGDLMYHIQQVGK-------FKEPVAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMC 497 (683)
T ss_pred EEEEecCchhhhHHHHhcc-------cCCchhhhhhHHHHHHhhhhhcC---CeeeeeccccceEeccCCceEeeecccc
Confidence 9999999999999987654 88889999999999999999998 9999999999999999999999999999
Q ss_pred hhc---CCCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 688 CAQ---GGDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 688 ~~~---~~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
+.. +..+.+.+||+.|+|||++....| +..+|+|||||+||||+.|++||+.+
T Consensus 498 KEni~~~~TTkTFCGTPdYiAPEIi~YqPY---------gksvDWWa~GVLLyEmlaGQpPFdGe 553 (683)
T KOG0696|consen 498 KENIFDGVTTKTFCGTPDYIAPEIIAYQPY---------GKSVDWWAFGVLLYEMLAGQPPFDGE 553 (683)
T ss_pred cccccCCcceeeecCCCcccccceEEeccc---------ccchhHHHHHHHHHHHHcCCCCCCCC
Confidence 864 345667899999999999877665 46789999999999999999999643
No 244
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=99.97 E-value=2.5e-31 Score=277.90 Aligned_cols=190 Identities=23% Similarity=0.361 Sum_probs=155.2
Q ss_pred ceeecCCcceEEEEEEc----CCcEEEEEEeecccc--CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEeeCC
Q 004248 540 NLIKNGHSGDLFRGILE----GGIPVVIKRIDLQSV--KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMP 613 (766)
Q Consensus 540 ~~ig~G~~g~Vy~~~~~----~g~~vavK~l~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey~~ 613 (766)
+.||+|+||.||+|... ++..||+|++..... ..+.+.+|+.++++++||||+++++++...++..++||||++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 80 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK 80 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence 46899999999999843 246899999854322 246788999999999999999999988755566899999999
Q ss_pred CCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcCCC
Q 004248 614 NGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGD 693 (766)
Q Consensus 614 ~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~~~ 693 (766)
+|+|.+++.+... ..++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++.....
T Consensus 81 ~~~L~~~~~~~~~------~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~ 151 (262)
T cd05058 81 HGDLRNFIRSETH------NPTVKDLIGFGLQVAKGMEYLASK---KFVHRDLAARNCMLDESFTVKVADFGLARDIYDK 151 (262)
T ss_pred CCCHHHHHHhcCC------CCCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCccccccccCC
Confidence 9999999975432 367888899999999999999987 9999999999999999999999999999754321
Q ss_pred C-------ccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcC-CCCCC
Q 004248 694 A-------HQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFN-NHLNL 747 (766)
Q Consensus 694 ~-------~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG-~~p~~ 747 (766)
. ....++..|+|||...... ++.++|||||||++|||+|| .+||.
T Consensus 152 ~~~~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~Di~slG~~l~el~~~~~~~~~ 204 (262)
T cd05058 152 EYYSVHNHTGAKLPVKWMALESLQTQK---------FTTKSDVWSFGVLLWELMTRGAPPYP 204 (262)
T ss_pred cceeecccccCcCCccccChhHhccCc---------cchHHHHHHHHHHHHHHHcCCCCCCC
Confidence 1 1223456799999875433 47899999999999999996 44553
No 245
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.97 E-value=2e-31 Score=281.76 Aligned_cols=190 Identities=21% Similarity=0.210 Sum_probs=155.1
Q ss_pred eeecCCcceEEEEEE-cCCcEEEEEEeeccccC----HHHHHHHHHHHh---hcCCCCcccceeEEEecCCcEEEEEeeC
Q 004248 541 LIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK----TEAYLLELDFFS---KVSHARLVPLLGHCMERENEKFLVYKYM 612 (766)
Q Consensus 541 ~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~----~~~~~~E~~~l~---~l~H~niv~l~~~~~~~~~~~~lV~Ey~ 612 (766)
+||+|+||.||++.. .+++.||+|.+...... ...+.+|..+++ ..+||||+.+++++.. ++..++||||+
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~lv~e~~ 79 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHT-PDKLCFILDLM 79 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEec-CCeEEEEEecC
Confidence 489999999999995 56899999998654322 223455554433 3479999999887765 56899999999
Q ss_pred CCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcCC
Q 004248 613 PNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGG 692 (766)
Q Consensus 613 ~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~~ 692 (766)
++|+|.+++..++ .++|.+...++.|++.||+|||+. +|+||||||+||++++++.+|++|||++.....
T Consensus 80 ~~~~L~~~i~~~~-------~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~ 149 (279)
T cd05633 80 NGGDLHYHLSQHG-------VFSEKEMRFYATEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSK 149 (279)
T ss_pred CCCCHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CcCCCCCCHHHEEECCCCCEEEccCCcceeccc
Confidence 9999999987543 389999999999999999999997 899999999999999999999999999875532
Q ss_pred -CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 693 -DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 693 -~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
......++..|+|||....+.. ++.++||||+||++|||+||+.||...
T Consensus 150 ~~~~~~~~~~~y~aPE~~~~~~~--------~~~~~Di~slG~~l~~l~~g~~pf~~~ 199 (279)
T cd05633 150 KKPHASVGTHGYMAPEVLQKGTA--------YDSSADWFSLGCMLFKLLRGHSPFRQH 199 (279)
T ss_pred cCccCcCCCcCccCHHHhcCCCC--------CCchhhhHHHHHHHHHHHhCCCCcCCC
Confidence 2233468899999998753221 478999999999999999999999543
No 246
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=99.97 E-value=2.8e-31 Score=278.58 Aligned_cols=197 Identities=20% Similarity=0.335 Sum_probs=163.4
Q ss_pred CCCCccceeecCCcceEEEEEEc-C---CcEEEEEEeecccc--CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGILE-G---GIPVVIKRIDLQSV--KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFL 607 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~~-~---g~~vavK~l~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~l 607 (766)
++|+..+.||+|+||.||+|... + +..||+|.++.... ..+.|.+|+.++++++||||+++++++.. ++..++
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~l 82 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTK-SKPVMI 82 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CCccEE
Confidence 46778899999999999999853 2 34799999865432 24679999999999999999999997765 568999
Q ss_pred EEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhh
Q 004248 608 VYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEV 687 (766)
Q Consensus 608 V~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a 687 (766)
||||+++|+|.+++.+... .+++.++..++.|++.|++|||+. +++||||||+||+++.++.+|++|||++
T Consensus 83 v~e~~~~~~L~~~~~~~~~------~~~~~~~~~i~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~~~l~dfg~~ 153 (267)
T cd05066 83 VTEYMENGSLDAFLRKHDG------QFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILVNSNLVCKVSDFGLS 153 (267)
T ss_pred EEEcCCCCCHHHHHHhcCC------CCCHHHHHHHHHHHHHHHHHHHHC---CEeehhhchhcEEECCCCeEEeCCCCcc
Confidence 9999999999999975432 489999999999999999999997 9999999999999999999999999999
Q ss_pred hhcCCCCc------cceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCCC
Q 004248 688 CAQGGDAH------QSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLSS 749 (766)
Q Consensus 688 ~~~~~~~~------~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~~ 749 (766)
+....... ....+..|++||...... ++.++|||||||++||+++ |+.||...
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~---------~~~~~Dv~slG~~l~ell~~g~~p~~~~ 213 (267)
T cd05066 154 RVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRK---------FTSASDVWSYGIVMWEVMSYGERPYWEM 213 (267)
T ss_pred cccccccceeeecCCCccceeecCHhHhccCc---------cCchhhhHHHHHHHHHHhcCCCCCcccC
Confidence 86532211 112245799999876443 4789999999999999886 99998543
No 247
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=99.97 E-value=2.5e-31 Score=276.82 Aligned_cols=196 Identities=21% Similarity=0.346 Sum_probs=164.1
Q ss_pred CCCCccceeecCCcceEEEEEEcCCcEEEEEEeeccccCHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEeeCC
Q 004248 534 GDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMP 613 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey~~ 613 (766)
++|...+.||+|+||.||+|.. +++.||+|.++... ..+.+.+|+.++++++||||+++++++.. +..++||||++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~-~~~~~~~e~~~l~~~~~~~i~~~~~~~~~--~~~~~v~e~~~ 81 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV-TAQAFLEETAVMTKLHHKNLVRLLGVILH--NGLYIVMELMS 81 (254)
T ss_pred HHceeeeeeccCCCCceEeccc-CCCceEEEeecCcc-hHHHHHHHHHHHHhCCCCCcCeEEEEEcC--CCcEEEEECCC
Confidence 3578889999999999999874 57789999986432 35679999999999999999999997754 45799999999
Q ss_pred CCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcCCC
Q 004248 614 NGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGD 693 (766)
Q Consensus 614 ~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~~~ 693 (766)
+|+|.+++..... ..+++.++..++.|++.|++|||+. +++||||||+||+++.++.+||+|||+++.....
T Consensus 82 ~~~L~~~l~~~~~-----~~~~~~~~~~~~~qi~~al~~lH~~---~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~ 153 (254)
T cd05083 82 KGNLVNFLRTRGR-----ALVSVIQLLQFSLDVAEGMEYLESK---KLVHRDLAARNILVSEDGVAKVSDFGLARVGSMG 153 (254)
T ss_pred CCCHHHHHHhcCc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCcEEECCCccceecccc
Confidence 9999999975432 3489999999999999999999987 9999999999999999999999999998765333
Q ss_pred CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCCCc
Q 004248 694 AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLSSR 750 (766)
Q Consensus 694 ~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~~~ 750 (766)
......+..|+|||....+. ++.++|||||||++|||++ |+.||...+
T Consensus 154 ~~~~~~~~~y~~pe~~~~~~---------~~~~~Dv~slG~~l~el~~~g~~p~~~~~ 202 (254)
T cd05083 154 VDNSKLPVKWTAPEALKHKK---------FSSKSDVWSYGVLLWEVFSYGRAPYPKMS 202 (254)
T ss_pred CCCCCCCceecCHHHhccCC---------cCchhhHHHHHHHHHHHHhCCCCCCccCC
Confidence 23333456799999775443 4789999999999999998 999985443
No 248
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=99.97 E-value=2.8e-31 Score=283.21 Aligned_cols=194 Identities=19% Similarity=0.263 Sum_probs=163.5
Q ss_pred CCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC------HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEE
Q 004248 535 DFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK------TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFL 607 (766)
Q Consensus 535 ~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~------~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~l 607 (766)
+|+..+.||+|+||.||+|.. .+|+.||||+++..... ...+.+|++++++++|+||+++++++.+ ++..++
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~~l 79 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGH-KSNINL 79 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeec-CCEEEE
Confidence 377788999999999999995 56899999999754332 3457789999999999999999998876 568999
Q ss_pred EEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhh
Q 004248 608 VYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEV 687 (766)
Q Consensus 608 V~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a 687 (766)
||||+ +|+|.+++.... ..+++..+..++.||++||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 80 v~e~~-~~~L~~~i~~~~------~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~ 149 (298)
T cd07841 80 VFEFM-ETDLEKVIKDKS------IVLTPADIKSYMLMTLRGLEYLHSN---WILHRDLKPNNLLIASDGVLKLADFGLA 149 (298)
T ss_pred EEccc-CCCHHHHHhccC------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCChhhEEEcCCCCEEEccceee
Confidence 99999 899999997543 1489999999999999999999998 9999999999999999999999999999
Q ss_pred hhcCCC---CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCC
Q 004248 688 CAQGGD---AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNL 747 (766)
Q Consensus 688 ~~~~~~---~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~ 747 (766)
+..... .....++..|+|||....... ++.++|||||||++|||++|++||.
T Consensus 150 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~--------~~~~~Dv~slG~il~e~~~g~~~~~ 204 (298)
T cd07841 150 RSFGSPNRKMTHQVVTRWYRAPELLFGARH--------YGVGVDMWSVGCIFAELLLRVPFLP 204 (298)
T ss_pred eeccCCCccccccccceeeeCHHHHhCCCC--------CCcHHHHHHHHHHHHHHHcCCcccc
Confidence 765322 223345778999997643221 4789999999999999999977664
No 249
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.97 E-value=1.8e-31 Score=282.50 Aligned_cols=201 Identities=19% Similarity=0.236 Sum_probs=162.7
Q ss_pred CCCccceeecCCcceEEEEEEc------CCcEEEEEEeeccccC--HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEE
Q 004248 535 DFSDANLIKNGHSGDLFRGILE------GGIPVVIKRIDLQSVK--TEAYLLELDFFSKVSHARLVPLLGHCMERENEKF 606 (766)
Q Consensus 535 ~~~~~~~ig~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~--~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~ 606 (766)
+|+..+.||+|+||.||+|... +++.||||+++..... .+.|.+|++++++++|||||++++++.. .+..+
T Consensus 6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~-~~~~~ 84 (283)
T cd05091 6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTK-EQPLS 84 (283)
T ss_pred HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcC-CCceE
Confidence 3566789999999999999853 2578999999754332 4678999999999999999999998765 46789
Q ss_pred EEEeeCCCCChhhhhhccCCC---------CCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCC
Q 004248 607 LVYKYMPNGDLSSSLYRKTNT---------EDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKF 677 (766)
Q Consensus 607 lV~Ey~~~GsL~~~l~~~~~~---------~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~ 677 (766)
+++||+++++|.+++...... ......+++..+..++.|++.||+|||+. +|+||||||+||++++++
T Consensus 85 ~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~---gi~H~dlkp~Nil~~~~~ 161 (283)
T cd05091 85 MIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSH---HVVHKDLATRNVLVFDKL 161 (283)
T ss_pred EEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHc---CccccccchhheEecCCC
Confidence 999999999999998532110 01123589999999999999999999987 999999999999999999
Q ss_pred cEEeccchhhhhcCCC-----CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCC
Q 004248 678 EVRLGSLSEVCAQGGD-----AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLS 748 (766)
Q Consensus 678 ~~kl~DFG~a~~~~~~-----~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~ 748 (766)
.+||+|||+++..... .....++..|+|||....+. ++.++|||||||++|||+| |..||..
T Consensus 162 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~Dv~slG~~l~el~~~g~~p~~~ 229 (283)
T cd05091 162 NVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGK---------FSIDSDIWSYGVVLWEVFSYGLQPYCG 229 (283)
T ss_pred ceEecccccccccccchheeeccCccCCccccCHHHHhcCC---------CCcchhHHHHHHHHHHHHcCCCCCCCC
Confidence 9999999998765221 11223456899999875443 4689999999999999998 8888854
No 250
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=99.97 E-value=2.6e-31 Score=282.42 Aligned_cols=201 Identities=18% Similarity=0.271 Sum_probs=162.5
Q ss_pred CCCccceeecCCcceEEEEEEc------CCcEEEEEEeeccccC--HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEE
Q 004248 535 DFSDANLIKNGHSGDLFRGILE------GGIPVVIKRIDLQSVK--TEAYLLELDFFSKVSHARLVPLLGHCMERENEKF 606 (766)
Q Consensus 535 ~~~~~~~ig~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~--~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~ 606 (766)
+|+..+.||+|+||.||+|+.. +...||+|.+...... .+++.+|++++++++||||+++++.|.. ++..+
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~ 79 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQ-DGPLL 79 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEec-CCCcE
Confidence 4677899999999999999842 2357899888644322 4578999999999999999999997765 56789
Q ss_pred EEEeeCCCCChhhhhhccCCC-----------------CCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCC
Q 004248 607 LVYKYMPNGDLSSSLYRKTNT-----------------EDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQAS 669 (766)
Q Consensus 607 lV~Ey~~~GsL~~~l~~~~~~-----------------~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~ 669 (766)
+|+||+++|+|.+++...... ......++|.++..++.|++.||+|||+. +|+||||||+
T Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~ivH~dikp~ 156 (290)
T cd05045 80 LIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEM---KLVHRDLAAR 156 (290)
T ss_pred EEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHC---Ceehhhhhhh
Confidence 999999999999998653210 01123589999999999999999999987 9999999999
Q ss_pred CeeeCCCCcEEeccchhhhhcCCC-----CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CC
Q 004248 670 SILLDDKFEVRLGSLSEVCAQGGD-----AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NN 743 (766)
Q Consensus 670 NILl~~~~~~kl~DFG~a~~~~~~-----~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~ 743 (766)
||++++++.+||+|||+++..... .....++..|+|||...... ++.++|||||||+++||+| |+
T Consensus 157 nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~---------~~~~~Di~slG~~l~el~t~g~ 227 (290)
T cd05045 157 NVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHI---------YTTQSDVWSFGVLLWEIVTLGG 227 (290)
T ss_pred eEEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCC---------cchHhHHHHHHHHHHHHHhcCC
Confidence 999999999999999999754221 11223456799999765433 4789999999999999999 99
Q ss_pred CCCCC
Q 004248 744 HLNLS 748 (766)
Q Consensus 744 ~p~~~ 748 (766)
.||..
T Consensus 228 ~p~~~ 232 (290)
T cd05045 228 NPYPG 232 (290)
T ss_pred CCCCC
Confidence 99854
No 251
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=99.97 E-value=2.2e-31 Score=279.91 Aligned_cols=207 Identities=18% Similarity=0.217 Sum_probs=171.7
Q ss_pred HhCCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccCHHHHHHHHHHHhhc-CCCCcccceeEEEecC-----Cc
Q 004248 532 ATGDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVKTEAYLLELDFFSKV-SHARLVPLLGHCMERE-----NE 604 (766)
Q Consensus 532 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~-----~~ 604 (766)
++++|+..+.||+|+||.||+|.. .+++.+|+|.+.......+++.+|+++++++ +||||+++++++.... ..
T Consensus 4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~ 83 (275)
T cd06608 4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQ 83 (275)
T ss_pred chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCchhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceE
Confidence 568899999999999999999996 4688999999876655567899999999999 7999999999876422 24
Q ss_pred EEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccc
Q 004248 605 KFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684 (766)
Q Consensus 605 ~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DF 684 (766)
.++||||+++++|.+++..... ....+++..+..++.|++.||+|||+. +|+||||+|+||++++++.+||+||
T Consensus 84 ~~lv~e~~~~~~L~~~~~~~~~---~~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~~l~p~ni~~~~~~~~~l~d~ 157 (275)
T cd06608 84 LWLVMELCGGGSVTDLVKGLRK---KGKRLKEEWIAYILRETLRGLAYLHEN---KVIHRDIKGQNILLTKNAEVKLVDF 157 (275)
T ss_pred EEEEEEcCCCCcHHHHHHHHhh---cCCCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEEccCCeEEECCC
Confidence 8999999999999999865321 113589999999999999999999997 9999999999999999999999999
Q ss_pred hhhhhcCCC---CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 685 SEVCAQGGD---AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 685 G~a~~~~~~---~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
|++...... .....++..|+|||........... ++.++|||||||++|||+||+.||..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~----~~~~~Dv~slG~il~~l~~g~~p~~~ 220 (275)
T cd06608 158 GVSAQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDAS----YDARSDVWSLGITAIELADGKPPLCD 220 (275)
T ss_pred ccceecccchhhhcCccccccccCHhHhcccccccCC----ccccccHHHhHHHHHHHHhCCCCccc
Confidence 998754321 2234578889999987543322212 57899999999999999999999954
No 252
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=99.97 E-value=1.8e-32 Score=267.24 Aligned_cols=197 Identities=17% Similarity=0.214 Sum_probs=162.9
Q ss_pred CCccceeecCCcceEEEEE-EcCCcEEEEEEeeccccC--HHHHHHHHHHHhhcC-CCCcccceeEEEecCCcEEEEEee
Q 004248 536 FSDANLIKNGHSGDLFRGI-LEGGIPVVIKRIDLQSVK--TEAYLLELDFFSKVS-HARLVPLLGHCMERENEKFLVYKY 611 (766)
Q Consensus 536 ~~~~~~ig~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~--~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~~lV~Ey 611 (766)
.+....+|.|+.|.|+++. ..+|...|||.+.....+ .+++++.+.++.+.+ .|.||+.+|||.. +..+++.||.
T Consensus 94 l~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~-n~dV~IcMel 172 (391)
T KOG0983|consen 94 LENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFIT-NTDVFICMEL 172 (391)
T ss_pred hhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEee-CchHHHHHHH
Confidence 3446789999999999998 567999999999765443 457888888888775 8999999998876 4578999999
Q ss_pred CCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhc-
Q 004248 612 MPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQ- 690 (766)
Q Consensus 612 ~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~- 690 (766)
|.. -++.++.+-. .++++...-++...++.||.||.++ .+|||||+||+|||+|+.|++|+||||++...
T Consensus 173 Ms~-C~ekLlkrik------~piPE~ilGk~tva~v~AL~YLKeK--H~viHRDvKPSNILlDe~GniKlCDFGIsGrlv 243 (391)
T KOG0983|consen 173 MST-CAEKLLKRIK------GPIPERILGKMTVAIVKALYYLKEK--HGVIHRDVKPSNILLDERGNIKLCDFGISGRLV 243 (391)
T ss_pred HHH-HHHHHHHHhc------CCchHHhhhhhHHHHHHHHHHHHHh--cceeecccCccceEEccCCCEEeecccccceee
Confidence 963 5666665543 2478888888999999999999887 48999999999999999999999999999665
Q ss_pred CCCC-ccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 691 GGDA-HQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 691 ~~~~-~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
+... +.+.|.+.|||||.+....... |+.++|||||||.++|++||+.||..
T Consensus 244 dSkAhtrsAGC~~YMaPERidp~~~~k------YDiRaDVWSlGITlveLaTg~yPy~~ 296 (391)
T KOG0983|consen 244 DSKAHTRSAGCAAYMAPERIDPPDKPK------YDIRADVWSLGITLVELATGQYPYKG 296 (391)
T ss_pred cccccccccCCccccCccccCCCCCCc------cchhhhhhhhccchhhhhcccCCCCC
Confidence 3333 3457889999999887664332 68899999999999999999999954
No 253
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=99.97 E-value=4.9e-31 Score=277.05 Aligned_cols=200 Identities=18% Similarity=0.264 Sum_probs=156.5
Q ss_pred ceeecCCcceEEEEEEcCC---cEEEEEEeecccc--CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEeeCCC
Q 004248 540 NLIKNGHSGDLFRGILEGG---IPVVIKRIDLQSV--KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPN 614 (766)
Q Consensus 540 ~~ig~G~~g~Vy~~~~~~g---~~vavK~l~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey~~~ 614 (766)
+.||+|+||.||+|...++ ..+++|.+..... ..+.|.+|+.+++.++||||++++++|.. ....|+||||+++
T Consensus 1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~-~~~~~lv~e~~~~ 79 (268)
T cd05086 1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVE-AIPYLLVFEYCEL 79 (268)
T ss_pred CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecC-CCccEEEEecCCC
Confidence 3699999999999985433 3566777654332 25689999999999999999999998875 4678999999999
Q ss_pred CChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcCC--
Q 004248 615 GDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGG-- 692 (766)
Q Consensus 615 GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~~-- 692 (766)
|+|.+++++... .....++.....++.||++||+|||+. +|+||||||+|||++.++.+||+|||++.....
T Consensus 80 ~~L~~~l~~~~~---~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~ 153 (268)
T cd05086 80 GDLKSYLSQEQW---HRRNSQLLLLQRMACEIAAGVTHMHKH---NFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKED 153 (268)
T ss_pred CcHHHHHHhhhc---ccccccHHHHHHHHHHHHHHHHHHHHC---CeeccCCccceEEEcCCccEEecccccccccCcch
Confidence 999999976432 112467778889999999999999987 999999999999999999999999999864311
Q ss_pred ---CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCC
Q 004248 693 ---DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLS 748 (766)
Q Consensus 693 ---~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~ 748 (766)
......++..|+|||.......+. .....+.++|||||||++|||++ |+.||..
T Consensus 154 ~~~~~~~~~~~~~y~aPE~~~~~~~~~--~~~~~~~~~DiwslG~~l~el~~~~~~p~~~ 211 (268)
T cd05086 154 YIETEDDKCVPLRWLAPELVGEFHGGL--ITAEQTKPSNVWALGVTLWELFENAAQPYSH 211 (268)
T ss_pred hhhcccCCcCcccccCchhcccccCcc--ccCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Confidence 112335677899999875432211 11125789999999999999997 4667743
No 254
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=99.97 E-value=1.4e-31 Score=284.86 Aligned_cols=193 Identities=18% Similarity=0.264 Sum_probs=163.4
Q ss_pred CCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC-HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEeeCC
Q 004248 536 FSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK-TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMP 613 (766)
Q Consensus 536 ~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~-~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey~~ 613 (766)
|.....||+|+||.||++.. .++..||||++...... .+.+.+|+.++++++||||+++++.+.. .+..|+||||++
T Consensus 24 ~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~-~~~~~lv~e~~~ 102 (292)
T cd06658 24 LDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLV-GDELWVVMEFLE 102 (292)
T ss_pred HhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheec-CCeEEEEEeCCC
Confidence 33346799999999999985 56889999998654433 5678999999999999999999997765 568999999999
Q ss_pred CCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcCCC
Q 004248 614 NGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGD 693 (766)
Q Consensus 614 ~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~~~ 693 (766)
+++|.+++... .+++.++..++.|++.||+|||+. +|+||||||+||++++++.+||+|||++......
T Consensus 103 ~~~L~~~~~~~--------~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~ 171 (292)
T cd06658 103 GGALTDIVTHT--------RMNEEQIATVCLSVLRALSYLHNQ---GVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKE 171 (292)
T ss_pred CCcHHHHHhcC--------CCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEccCcchhhcccc
Confidence 99999988532 378999999999999999999997 9999999999999999999999999998765322
Q ss_pred ---CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 694 ---AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 694 ---~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
.....++..|+|||...... ++.++|||||||++|||++|+.||...
T Consensus 172 ~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~Dv~slGvil~el~~g~~p~~~~ 221 (292)
T cd06658 172 VPKRKSLVGTPYWMAPEVISRLP---------YGTEVDIWSLGIMVIEMIDGEPPYFNE 221 (292)
T ss_pred cccCceeecCccccCHHHHccCC---------CCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 22345788999999875433 467999999999999999999999643
No 255
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.97 E-value=4.3e-31 Score=279.10 Aligned_cols=190 Identities=21% Similarity=0.200 Sum_probs=155.6
Q ss_pred eeecCCcceEEEEEE-cCCcEEEEEEeeccccC----HHHHHHHHH---HHhhcCCCCcccceeEEEecCCcEEEEEeeC
Q 004248 541 LIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK----TEAYLLELD---FFSKVSHARLVPLLGHCMERENEKFLVYKYM 612 (766)
Q Consensus 541 ~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~----~~~~~~E~~---~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey~ 612 (766)
+||+|+||.||+|.. .+++.||+|.+...... ...+..|.. .++...||||+++++++.. ++..++||||+
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~v~e~~ 79 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHT-PDKLSFILDLM 79 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeec-CCEEEEEEecC
Confidence 489999999999984 56899999998754322 223444543 4445689999999986654 56899999999
Q ss_pred CCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcCC
Q 004248 613 PNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGG 692 (766)
Q Consensus 613 ~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~~ 692 (766)
++|+|.+++.... .++|.++..++.|+++||+|||+. +|+||||||+||++++++.+||+|||+++....
T Consensus 80 ~g~~L~~~l~~~~-------~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~ 149 (278)
T cd05606 80 NGGDLHYHLSQHG-------VFSEAEMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSK 149 (278)
T ss_pred CCCcHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CEEcCCCCHHHEEECCCCCEEEccCcCccccCc
Confidence 9999999886543 389999999999999999999997 899999999999999999999999999875532
Q ss_pred -CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 693 -DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 693 -~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
......++..|+|||.+..+.. ++.++||||+||++|||++|+.||...
T Consensus 150 ~~~~~~~~~~~y~aPE~~~~~~~--------~~~~~Di~s~G~~l~~l~~g~~p~~~~ 199 (278)
T cd05606 150 KKPHASVGTHGYMAPEVLQKGVA--------YDSSADWFSLGCMLFKLLRGHSPFRQH 199 (278)
T ss_pred cCCcCcCCCcCCcCcHHhcCCCC--------CCcccchHhHHHHHHHHHhCCCCCCCC
Confidence 2334568899999998764322 478999999999999999999999644
No 256
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.97 E-value=3.9e-31 Score=283.20 Aligned_cols=202 Identities=13% Similarity=0.264 Sum_probs=163.9
Q ss_pred CCCCccceeecCCcceEEEEEE--------cCCcEEEEEEeecccc--CHHHHHHHHHHHhhc-CCCCcccceeEEEecC
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL--------EGGIPVVIKRIDLQSV--KTEAYLLELDFFSKV-SHARLVPLLGHCMERE 602 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~--------~~g~~vavK~l~~~~~--~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~ 602 (766)
++|...+.||+|+||.||+|+. .++..||+|.+..... ..+++.+|+.+++.+ +||||+++++++.. .
T Consensus 15 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~-~ 93 (304)
T cd05101 15 DKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ-D 93 (304)
T ss_pred HHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEec-C
Confidence 4577889999999999999973 1245799999864322 246789999999999 89999999997765 5
Q ss_pred CcEEEEEeeCCCCChhhhhhccCCCC---------CcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeee
Q 004248 603 NEKFLVYKYMPNGDLSSSLYRKTNTE---------DDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILL 673 (766)
Q Consensus 603 ~~~~lV~Ey~~~GsL~~~l~~~~~~~---------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl 673 (766)
+..|+||||+++|+|.+++.+..... .....++|.++..++.||+.||+|||+. +|+||||||+||++
T Consensus 94 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~Nili 170 (304)
T cd05101 94 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQ---KCIHRDLAARNVLV 170 (304)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHC---CeeecccccceEEE
Confidence 67999999999999999997643210 0123589999999999999999999997 99999999999999
Q ss_pred CCCCcEEeccchhhhhcCCC-----CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCC
Q 004248 674 DDKFEVRLGSLSEVCAQGGD-----AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNL 747 (766)
Q Consensus 674 ~~~~~~kl~DFG~a~~~~~~-----~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~ 747 (766)
++++.+||+|||+++..... .....++..|+|||...... ++.++|||||||++|||+| |+.||.
T Consensus 171 ~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~Di~slG~~l~el~~~g~~p~~ 241 (304)
T cd05101 171 TENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRV---------YTHQSDVWSFGVLMWEIFTLGGSPYP 241 (304)
T ss_pred cCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCC---------CCchhhHHHHHHHHHHHHcCCCCCcc
Confidence 99999999999999865321 12223456799999875433 4789999999999999998 788874
Q ss_pred C
Q 004248 748 S 748 (766)
Q Consensus 748 ~ 748 (766)
.
T Consensus 242 ~ 242 (304)
T cd05101 242 G 242 (304)
T ss_pred c
Confidence 3
No 257
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=99.97 E-value=2.5e-31 Score=281.53 Aligned_cols=196 Identities=19% Similarity=0.281 Sum_probs=164.5
Q ss_pred CCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC---HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEe
Q 004248 535 DFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK---TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYK 610 (766)
Q Consensus 535 ~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~---~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~E 610 (766)
+|+..+.||+|++|.||+|+. .+|+.||||++...... .+.+.+|++++++++||||+++++++.+ ++..++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~~v~e 79 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT-ENKLYLVFE 79 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhccc-CCcEEEEee
Confidence 478889999999999999985 57899999998654322 3578999999999999999999998765 568999999
Q ss_pred eCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhc
Q 004248 611 YMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQ 690 (766)
Q Consensus 611 y~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~ 690 (766)
|++ ++|.+++..... ..+++.++..++.|++.||+|||+. +++||||||+||++++++.+||+|||+++..
T Consensus 80 ~~~-~~l~~~~~~~~~-----~~l~~~~~~~~~~~i~~~l~~lh~~---~i~H~~l~p~nill~~~~~~~l~dfg~~~~~ 150 (284)
T cd07860 80 FLH-QDLKKFMDASPL-----SGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF 150 (284)
T ss_pred ccc-cCHHHHHHhCCC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEeeccchhhc
Confidence 996 689998865432 3489999999999999999999987 9999999999999999999999999998765
Q ss_pred CCC---CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 691 GGD---AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 691 ~~~---~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
+.. .....++..|+|||....... ++.++|||||||++|||+||+.||..
T Consensus 151 ~~~~~~~~~~~~~~~y~aPE~~~~~~~--------~~~~~Dv~slG~il~~l~tg~~p~~~ 203 (284)
T cd07860 151 GVPVRTYTHEVVTLWYRAPEILLGCKY--------YSTAVDIWSLGCIFAEMVTRRALFPG 203 (284)
T ss_pred ccCccccccccccccccCCeEEecCCC--------CCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 322 223346778999997643321 46789999999999999999999853
No 258
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=99.97 E-value=3e-31 Score=279.75 Aligned_cols=202 Identities=19% Similarity=0.296 Sum_probs=165.9
Q ss_pred CCCCccceeecCCcceEEEEEEc------CCcEEEEEEeecccc--CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcE
Q 004248 534 GDFSDANLIKNGHSGDLFRGILE------GGIPVVIKRIDLQSV--KTEAYLLELDFFSKVSHARLVPLLGHCMERENEK 605 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~~------~g~~vavK~l~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 605 (766)
++|...+.||+|+||.||+|... ++..||+|.+..... ...++.+|++++++++||||+++++++.. ....
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~ 84 (277)
T cd05032 6 EKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVST-GQPT 84 (277)
T ss_pred HHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcC-CCCc
Confidence 46788899999999999999853 247899999865432 24578999999999999999999998765 5679
Q ss_pred EEEEeeCCCCChhhhhhccCCCC---CcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEec
Q 004248 606 FLVYKYMPNGDLSSSLYRKTNTE---DDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLG 682 (766)
Q Consensus 606 ~lV~Ey~~~GsL~~~l~~~~~~~---~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~ 682 (766)
++||||+++|+|.+++....... .....++|.++..++.|++.||+|||+. +|+||||||+||++++++.+||+
T Consensus 85 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~di~p~nill~~~~~~kl~ 161 (277)
T cd05032 85 LVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAK---KFVHRDLAARNCMVAEDLTVKIG 161 (277)
T ss_pred EEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccChheEEEcCCCCEEEC
Confidence 99999999999999997543211 1123589999999999999999999987 99999999999999999999999
Q ss_pred cchhhhhcCCC-----CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCC
Q 004248 683 SLSEVCAQGGD-----AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLS 748 (766)
Q Consensus 683 DFG~a~~~~~~-----~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~ 748 (766)
|||+++..... .....++..|+|||....+. ++.++|||||||++||++| |+.||..
T Consensus 162 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~Di~slG~il~el~t~g~~p~~~ 224 (277)
T cd05032 162 DFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGV---------FTTKSDVWSFGVVLWEMATLAEQPYQG 224 (277)
T ss_pred CcccchhhccCcccccCCCCCccccccCHHHHhcCC---------CCcccchHHHHHHHHHhhccCCCCCcc
Confidence 99998765321 12234567899999875433 4789999999999999998 8989843
No 259
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=99.97 E-value=4e-31 Score=277.74 Aligned_cols=196 Identities=20% Similarity=0.330 Sum_probs=161.7
Q ss_pred CCCccceeecCCcceEEEEEEc-CC---cEEEEEEeecccc--CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEE
Q 004248 535 DFSDANLIKNGHSGDLFRGILE-GG---IPVVIKRIDLQSV--KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLV 608 (766)
Q Consensus 535 ~~~~~~~ig~G~~g~Vy~~~~~-~g---~~vavK~l~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV 608 (766)
+|+..+.||+|+||.||+|... ++ ..||||.+..... ..++|.+|+.++++++||||+++++++.. ++..++|
T Consensus 5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~-~~~~~lv 83 (269)
T cd05065 5 CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTK-SRPVMII 83 (269)
T ss_pred HeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECC-CCceEEE
Confidence 4777899999999999999853 33 3699999865322 25689999999999999999999997755 5678999
Q ss_pred EeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhh
Q 004248 609 YKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVC 688 (766)
Q Consensus 609 ~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~ 688 (766)
|||+++|+|.+++....+ .+++.++..++.|++.||+|||+. +++||||||+||+++.++.+|++|||+++
T Consensus 84 ~e~~~~~~L~~~l~~~~~------~~~~~~~~~i~~~l~~al~~lH~~---g~~H~dl~p~nili~~~~~~kl~dfg~~~ 154 (269)
T cd05065 84 TEFMENGALDSFLRQNDG------QFTVIQLVGMLRGIAAGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLSR 154 (269)
T ss_pred EecCCCCcHHHHHhhCCC------CCCHHHHHHHHHHHHHHHHHHHHC---CEeecccChheEEEcCCCcEEECCCcccc
Confidence 999999999999975432 489999999999999999999997 99999999999999999999999999987
Q ss_pred hcCCCCc-----cc---eeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCCC
Q 004248 689 AQGGDAH-----QS---RITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLSS 749 (766)
Q Consensus 689 ~~~~~~~-----~~---~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~~ 749 (766)
....... .. ..+..|++||...... ++.++|||||||++|||++ |+.||...
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~---------~~~~~DvwslG~~l~e~l~~g~~p~~~~ 215 (269)
T cd05065 155 FLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRK---------FTSASDVWSYGIVMWEVMSYGERPYWDM 215 (269)
T ss_pred ccccCccccccccccCCCcceeecCHhHhccCc---------ccchhhhhhhHHHHHHHhcCCCCCCCCC
Confidence 6532111 01 1134699999875443 4789999999999999886 99999644
No 260
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=99.97 E-value=8.6e-32 Score=280.68 Aligned_cols=194 Identities=24% Similarity=0.336 Sum_probs=165.9
Q ss_pred CCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccCH---HHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEee
Q 004248 536 FSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVKT---EAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKY 611 (766)
Q Consensus 536 ~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~---~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey 611 (766)
|+..+.||+|+||+||+++. .+++.||+|.+....... ....+|+.++++++||||+++++++.. .+..++||||
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~-~~~~~~v~~~ 79 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQD-DNYLYIVMEY 79 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEE-SSEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccccccccccccccccc-cccccccccc
Confidence 45678999999999999995 457799999998765442 234569999999999999999998876 5689999999
Q ss_pred CCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhc-
Q 004248 612 MPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQ- 690 (766)
Q Consensus 612 ~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~- 690 (766)
+++++|.+++.... .+++.++..++.|+++||+|||+. +|+||||||+||++++++++||+|||.+...
T Consensus 80 ~~~~~L~~~l~~~~-------~~~~~~~~~~~~qi~~~L~~Lh~~---~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~ 149 (260)
T PF00069_consen 80 CPGGSLQDYLQKNK-------PLSEEEILKIAYQILEALAYLHSK---GIVHRDIKPENILLDENGEVKLIDFGSSVKLS 149 (260)
T ss_dssp ETTEBHHHHHHHHS-------SBBHHHHHHHHHHHHHHHHHHHHT---TEEESSBSGGGEEESTTSEEEESSGTTTEEST
T ss_pred cccccccccccccc-------cccccccccccccccccccccccc---cccccccccccccccccccccccccccccccc
Confidence 99999999998433 389999999999999999999998 9999999999999999999999999998742
Q ss_pred --CCCCccceeeecccCCCCCC-CCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 691 --GGDAHQSRITRLLRLPQSSE-QGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 691 --~~~~~~~~~t~~y~aPe~~~-~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
........++..|+|||... ... .+.++||||+|++++||++|+.||...
T Consensus 150 ~~~~~~~~~~~~~~y~aPE~~~~~~~---------~~~~~Di~slG~il~~l~~~~~p~~~~ 202 (260)
T PF00069_consen 150 ENNENFNPFVGTPEYMAPEVLQQGKK---------YTRKSDIWSLGIILYELLTGKLPFEES 202 (260)
T ss_dssp STTSEBSSSSSSGGGSCHHHHTTTSS---------BSTHHHHHHHHHHHHHHHHSSSSSTTS
T ss_pred cccccccccccccccccccccccccc---------ccccccccccccccccccccccccccc
Confidence 22334456788999999876 222 578999999999999999999999654
No 261
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=99.97 E-value=3.3e-31 Score=276.28 Aligned_cols=191 Identities=20% Similarity=0.297 Sum_probs=158.3
Q ss_pred ceeecCCcceEEEEEEcC-C----------cEEEEEEeeccccCHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEE
Q 004248 540 NLIKNGHSGDLFRGILEG-G----------IPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLV 608 (766)
Q Consensus 540 ~~ig~G~~g~Vy~~~~~~-g----------~~vavK~l~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV 608 (766)
+.||+|+||.||+|...+ + ..|++|.+.........|.+|+.++++++||||+++++++.. +..++|
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~lv 78 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSHKHLVKLYGVCVR--DENIMV 78 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhhHHHHHHHHHHHHcCCCcchhheeeEEec--CCcEEE
Confidence 468999999999999643 3 358888876544336789999999999999999999998876 567999
Q ss_pred EeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCC-------cEEe
Q 004248 609 YKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKF-------EVRL 681 (766)
Q Consensus 609 ~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~-------~~kl 681 (766)
|||+++|+|.+++..... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++ .+||
T Consensus 79 ~e~~~~~~L~~~l~~~~~------~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dlkp~Nill~~~~~~~~~~~~~kl 149 (259)
T cd05037 79 EEYVKFGPLDVFLHREKN------NVSLHWKLDVAKQLASALHYLEDK---KLVHGNVCGKNILVARYGLNEGYVPFIKL 149 (259)
T ss_pred EEcCCCCcHHHHHHhhcc------CCCHHHHHHHHHHHHHHHHHHhhC---CeecccCccceEEEecCccccCCceeEEe
Confidence 999999999999976432 489999999999999999999987 999999999999999888 7999
Q ss_pred ccchhhhhcCCCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCCC
Q 004248 682 GSLSEVCAQGGDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLSS 749 (766)
Q Consensus 682 ~DFG~a~~~~~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~~ 749 (766)
+|||+++.... .....++..|+|||........ ++.++|||||||++|||++ |..|+...
T Consensus 150 ~Dfg~a~~~~~-~~~~~~~~~y~aPE~~~~~~~~-------~~~~~Di~slG~~~~~l~~~~~~p~~~~ 210 (259)
T cd05037 150 SDPGIPITVLS-REERVERIPWIAPECIRNGQAS-------LTIAADKWSFGTTLLEICSNGEEPLSTL 210 (259)
T ss_pred CCCCccccccc-ccccccCCCccChhhhcCCCCC-------cchhhHHHHHHHHHHHHHhCCCCCcccC
Confidence 99999986543 2223456679999987654211 5789999999999999999 57777544
No 262
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.97 E-value=2.7e-31 Score=284.82 Aligned_cols=202 Identities=14% Similarity=0.243 Sum_probs=163.8
Q ss_pred CCCCccceeecCCcceEEEEEEc--------CCcEEEEEEeecccc--CHHHHHHHHHHHhhc-CCCCcccceeEEEecC
Q 004248 534 GDFSDANLIKNGHSGDLFRGILE--------GGIPVVIKRIDLQSV--KTEAYLLELDFFSKV-SHARLVPLLGHCMERE 602 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~~--------~g~~vavK~l~~~~~--~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~ 602 (766)
++|...+.||+|+||.||+|+.. ++..||+|.++.... ..+++.+|+++++++ +||||++++++|.. .
T Consensus 18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~-~ 96 (307)
T cd05098 18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ-D 96 (307)
T ss_pred HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEec-C
Confidence 46888999999999999999742 235799999975432 245788999999999 79999999998865 5
Q ss_pred CcEEEEEeeCCCCChhhhhhccCCCC---------CcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeee
Q 004248 603 NEKFLVYKYMPNGDLSSSLYRKTNTE---------DDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILL 673 (766)
Q Consensus 603 ~~~~lV~Ey~~~GsL~~~l~~~~~~~---------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl 673 (766)
+..|+||||+++|+|.+++..++... .....++|.++..++.|++.||+|||+. +++||||||+||++
T Consensus 97 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~Nill 173 (307)
T cd05098 97 GPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLV 173 (307)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHHheEE
Confidence 68999999999999999997643210 1123589999999999999999999987 99999999999999
Q ss_pred CCCCcEEeccchhhhhcCCC-----CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCC
Q 004248 674 DDKFEVRLGSLSEVCAQGGD-----AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNL 747 (766)
Q Consensus 674 ~~~~~~kl~DFG~a~~~~~~-----~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~ 747 (766)
++++.+||+|||.++..... .....++..|+|||...... ++.++|||||||++|||++ |+.||.
T Consensus 174 ~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~DvwslG~~l~el~~~g~~p~~ 244 (307)
T cd05098 174 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRI---------YTHQSDVWSFGVLLWEIFTLGGSPYP 244 (307)
T ss_pred cCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCC---------CCcHHHHHHHHHHHHHHHcCCCCCCC
Confidence 99999999999998765321 11122345799999875443 4789999999999999998 888884
Q ss_pred C
Q 004248 748 S 748 (766)
Q Consensus 748 ~ 748 (766)
.
T Consensus 245 ~ 245 (307)
T cd05098 245 G 245 (307)
T ss_pred c
Confidence 3
No 263
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=99.97 E-value=4.2e-31 Score=275.56 Aligned_cols=189 Identities=21% Similarity=0.357 Sum_probs=157.9
Q ss_pred ceeecCCcceEEEEEEc--C--CcEEEEEEeecccc--CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEeeCC
Q 004248 540 NLIKNGHSGDLFRGILE--G--GIPVVIKRIDLQSV--KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMP 613 (766)
Q Consensus 540 ~~ig~G~~g~Vy~~~~~--~--g~~vavK~l~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey~~ 613 (766)
++||+|+||.||+|+.. + +..||+|.+..... ..+++.+|++++++++|||||++++++. .+..++||||++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~--~~~~~~v~e~~~ 78 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK--GEPLMLVMELAP 78 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc--CCceEEEEEeCC
Confidence 47999999999999742 2 37899999976554 3567999999999999999999999764 356899999999
Q ss_pred CCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcCCC
Q 004248 614 NGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGD 693 (766)
Q Consensus 614 ~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~~~ 693 (766)
+|+|.+++.+.. .++|..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||+++.....
T Consensus 79 ~~~L~~~l~~~~-------~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~ 148 (257)
T cd05060 79 LGPLLKYLKKRR-------EIPVSDLKELAHQVAMGMAYLESK---HFVHRDLAARNVLLVNRHQAKISDFGMSRALGAG 148 (257)
T ss_pred CCcHHHHHHhCC-------CCCHHHHHHHHHHHHHHHHHHhhc---CeeccCcccceEEEcCCCcEEeccccccceeecC
Confidence 999999997643 389999999999999999999987 8999999999999999999999999999865322
Q ss_pred Ccc------ceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCCC
Q 004248 694 AHQ------SRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLSS 749 (766)
Q Consensus 694 ~~~------~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~~ 749 (766)
... ..++..|+|||...... ++.++|||||||++|||++ |+.||...
T Consensus 149 ~~~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~Di~slG~~l~~~~~~g~~p~~~~ 202 (257)
T cd05060 149 SDYYRATTAGRWPLKWYAPECINYGK---------FSSKSDVWSYGVTLWEAFSYGAKPYGEM 202 (257)
T ss_pred CcccccccCccccccccCHHHhcCCC---------CCccchHHHHHHHHHHHHcCCCCCcccC
Confidence 111 11234699999875443 4789999999999999998 99998543
No 264
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=99.97 E-value=2.4e-31 Score=283.92 Aligned_cols=192 Identities=19% Similarity=0.242 Sum_probs=163.5
Q ss_pred CccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC-HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEeeCCC
Q 004248 537 SDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK-TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPN 614 (766)
Q Consensus 537 ~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~-~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey~~~ 614 (766)
+....||+|+||.||+|.. .+++.||+|.+...... .+.+.+|+.+++.++||||+++++++.. ++..|+||||+++
T Consensus 24 ~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~-~~~~~iv~e~~~~ 102 (297)
T cd06659 24 ENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLV-GEELWVLMEFLQG 102 (297)
T ss_pred HhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheee-CCeEEEEEecCCC
Confidence 3456799999999999985 57899999999654433 5678899999999999999999997765 5689999999999
Q ss_pred CChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcCCC-
Q 004248 615 GDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGD- 693 (766)
Q Consensus 615 GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~~~- 693 (766)
++|.+++... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 103 ~~L~~~~~~~--------~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~ 171 (297)
T cd06659 103 GALTDIVSQT--------RLNEEQIATVCESVLQALCYLHSQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV 171 (297)
T ss_pred CCHHHHHhhc--------CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHeEEccCCcEEEeechhHhhccccc
Confidence 9999987532 389999999999999999999987 9999999999999999999999999998765322
Q ss_pred --CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 694 --AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 694 --~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
.....++..|+|||...... ++.++|||||||++|||++|+.||...
T Consensus 172 ~~~~~~~~~~~y~aPE~~~~~~---------~~~~~Dv~slG~il~el~~g~~p~~~~ 220 (297)
T cd06659 172 PKRKSLVGTPYWMAPEVISRTP---------YGTEVDIWSLGIMVIEMVDGEPPYFSD 220 (297)
T ss_pred ccccceecCccccCHHHHccCC---------CCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 23346788999999875433 468999999999999999999998643
No 265
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=99.97 E-value=5.8e-31 Score=282.02 Aligned_cols=196 Identities=18% Similarity=0.188 Sum_probs=164.7
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeecccc----CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV----KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLV 608 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~----~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV 608 (766)
++|+..+.||+|+||.||+|.. .+++.||+|.+..... ..+.+.+|+++++.++||||+++++.+.. ++..++|
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~~lv 79 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFET-KRHLCMV 79 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEec-CCEEEEE
Confidence 4688899999999999999994 5688999999876532 13568899999999999999999987755 5678999
Q ss_pred EeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhh
Q 004248 609 YKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVC 688 (766)
Q Consensus 609 ~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~ 688 (766)
|||+++|+|.+++...+ .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+|++|||+++
T Consensus 80 ~e~~~g~~L~~~l~~~~-------~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~NIll~~~~~~~l~dfg~~~ 149 (305)
T cd05609 80 MEYVEGGDCATLLKNIG-------ALPVDMARMYFAETVLALEYLHNY---GIVHRDLKPDNLLITSMGHIKLTDFGLSK 149 (305)
T ss_pred EecCCCCcHHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHEEECCCCCEEEeeCCCcc
Confidence 99999999999996543 389999999999999999999997 99999999999999999999999999986
Q ss_pred hcCCC------------------CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 689 AQGGD------------------AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 689 ~~~~~------------------~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
..... .....++..|+|||...... ++.++|||||||++|||+||+.||...
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~Di~slG~vl~el~~g~~pf~~~ 219 (305)
T cd05609 150 IGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQG---------YGKPVDWWAMGIILYEFLVGCVPFFGD 219 (305)
T ss_pred ccCcCccccccccccccchhhccccCCccCccccCchhccCCC---------CCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 42100 01124577899999875433 478999999999999999999999643
No 266
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.97 E-value=6e-31 Score=275.67 Aligned_cols=196 Identities=18% Similarity=0.258 Sum_probs=164.7
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccc------cCHHHHHHHHHHHhhcCCCCcccceeEEEecC-CcE
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQS------VKTEAYLLELDFFSKVSHARLVPLLGHCMERE-NEK 605 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~------~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~~ 605 (766)
.+|+..+.||+|+||.||+|.. .+++.||+|.+.... ...+.+.+|++++++++||||+++++++.+.+ +..
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 4688899999999999999994 568999999885321 11357889999999999999999999775432 458
Q ss_pred EEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccch
Q 004248 606 FLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLS 685 (766)
Q Consensus 606 ~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG 685 (766)
++|+||+++++|.+++.... .+++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 82 ~~v~e~~~~~~L~~~~~~~~-------~l~~~~~~~~~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg 151 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAYG-------ALTENVTRRYTRQILQGVSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFG 151 (264)
T ss_pred EEEEEeCCCCcHHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECccc
Confidence 89999999999999987543 378999999999999999999987 99999999999999999999999999
Q ss_pred hhhhcCC------CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 686 EVCAQGG------DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 686 ~a~~~~~------~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
+++.... ......++..|+|||...... .+.++|||||||++|||++|+.||..
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~Di~slG~il~~l~~g~~p~~~ 211 (264)
T cd06653 152 ASKRIQTICMSGTGIKSVTGTPYWMSPEVISGEG---------YGRKADVWSVACTVVEMLTEKPPWAE 211 (264)
T ss_pred cccccccccccCccccccCCcccccCHhhhcCCC---------CCccccHHHHHHHHHHHHhCCCCCCc
Confidence 9975421 112345788899999876543 46799999999999999999999953
No 267
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=99.97 E-value=4.2e-31 Score=278.35 Aligned_cols=195 Identities=22% Similarity=0.247 Sum_probs=168.2
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC--HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEe
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK--TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYK 610 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~--~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~E 610 (766)
++|+..+.||.|+||.||+|+. .+++.||+|.+...... ...+.+|++++++++||||+++++++.+ +...|+|+|
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~~v~e 79 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLK-GSKLWIIME 79 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEE-CCeEEEEEE
Confidence 3678889999999999999995 46899999998754322 4578999999999999999999998776 568999999
Q ss_pred eCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhc
Q 004248 611 YMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQ 690 (766)
Q Consensus 611 y~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~ 690 (766)
|+++|+|.++++.. .+++..+..++.|++.|+.|||+. +|+||||||+||++++++.++|+|||+++..
T Consensus 80 ~~~~~~L~~~~~~~--------~~~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~ 148 (274)
T cd06609 80 YCGGGSCLDLLKPG--------KLDETYIAFILREVLLGLEYLHEE---GKIHRDIKAANILLSEEGDVKLADFGVSGQL 148 (274)
T ss_pred eeCCCcHHHHHhhc--------CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEcccccceee
Confidence 99999999998643 489999999999999999999997 8999999999999999999999999999776
Q ss_pred CCC---CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 691 GGD---AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 691 ~~~---~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
... .....++..|++||...... ++.++|||||||++|||+||+.||...
T Consensus 149 ~~~~~~~~~~~~~~~y~~PE~~~~~~---------~~~~sDv~slG~il~~l~tg~~p~~~~ 201 (274)
T cd06609 149 TSTMSKRNTFVGTPFWMAPEVIKQSG---------YDEKADIWSLGITAIELAKGEPPLSDL 201 (274)
T ss_pred cccccccccccCCccccChhhhccCC---------CCchhhHHHHHHHHHHHHhCCCCcccC
Confidence 432 23345677899999876543 478999999999999999999999543
No 268
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=99.97 E-value=4.2e-31 Score=274.97 Aligned_cols=196 Identities=17% Similarity=0.246 Sum_probs=168.9
Q ss_pred CCCCccceeecCCcceEEEEEEc-CCcEEEEEEeeccccCHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEeeC
Q 004248 534 GDFSDANLIKNGHSGDLFRGILE-GGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYM 612 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey~ 612 (766)
++|+..+.||+|+||.||+|+.. +++.||+|.+..... .+++.+|++++++++||||+++++++.. +...|+++||+
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~e~~~~~~l~~~~i~~~~~~~~~-~~~~~l~~e~~ 80 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED-LQEIIKEISILKQCDSPYIVKYYGSYFK-NTDLWIVMEYC 80 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH-HHHHHHHHHHHHhCCCCcEeeeeeeeec-CCcEEEEEecC
Confidence 57888999999999999999965 488999999875533 6789999999999999999999998776 56899999999
Q ss_pred CCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcCC
Q 004248 613 PNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGG 692 (766)
Q Consensus 613 ~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~~ 692 (766)
++++|.+++.... ..++|..+..++.|++.||.|||+. +|+||||+|+||++++++.+||+|||++.....
T Consensus 81 ~~~~L~~~l~~~~------~~l~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~ 151 (256)
T cd06612 81 GAGSVSDIMKITN------KTLTEEEIAAILYQTLKGLEYLHSN---KKIHRDIKAGNILLNEEGQAKLADFGVSGQLTD 151 (256)
T ss_pred CCCcHHHHHHhCc------cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEECCCCcEEEcccccchhccc
Confidence 9999999996533 2489999999999999999999987 999999999999999999999999999886532
Q ss_pred C---CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 693 D---AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 693 ~---~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
. .....++..|++||...... ++.++|||||||++|||+||+.||...
T Consensus 152 ~~~~~~~~~~~~~y~~PE~~~~~~---------~~~~~Di~s~G~il~~l~~g~~p~~~~ 202 (256)
T cd06612 152 TMAKRNTVIGTPFWMAPEVIQEIG---------YNNKADIWSLGITAIEMAEGKPPYSDI 202 (256)
T ss_pred CccccccccCCccccCHHHHhcCC---------CCchhhHHHHHHHHHHHHhCCCCCCCc
Confidence 2 22334677899999875432 578999999999999999999998543
No 269
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=99.97 E-value=4.7e-31 Score=274.87 Aligned_cols=197 Identities=21% Similarity=0.307 Sum_probs=166.8
Q ss_pred CCCCccceeecCCcceEEEEEEcCCcEEEEEEeeccccCHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEeeCC
Q 004248 534 GDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMP 613 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey~~ 613 (766)
.+|+..+.||+|+||.||+|...++..+|+|.+........+|.+|++++++++||||+++++++.. ....++||||++
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~~v~e~~~ 82 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAMSEEDFIEEAQVMMKLSHPKLVQLYGVCTE-RSPICLVFEFME 82 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCCCHHHHHHHHHHHHhCCCCCeeeEEEEEcc-CCceEEEEEcCC
Confidence 3577789999999999999997778899999987655556789999999999999999999997755 567899999999
Q ss_pred CCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcCCC
Q 004248 614 NGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGD 693 (766)
Q Consensus 614 ~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~~~ 693 (766)
+|+|.+++..... .++|+.+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||.++.....
T Consensus 83 ~~~L~~~~~~~~~------~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~ 153 (256)
T cd05112 83 HGCLSDYLRAQRG------KFSQETLLGMCLDVCEGMAYLESS---NVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDD 153 (256)
T ss_pred CCcHHHHHHhCcc------CCCHHHHHHHHHHHHHHHHHHHHC---CccccccccceEEEcCCCeEEECCCcceeecccC
Confidence 9999999875432 478999999999999999999987 8999999999999999999999999998765322
Q ss_pred C----ccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCCC
Q 004248 694 A----HQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLSS 749 (766)
Q Consensus 694 ~----~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~~ 749 (766)
. ....++..|+|||...... ++.++|||||||++|||++ |+.||...
T Consensus 154 ~~~~~~~~~~~~~~~aPe~~~~~~---------~~~~~Dv~slG~~l~el~~~g~~p~~~~ 205 (256)
T cd05112 154 QYTSSTGTKFPVKWSSPEVFSFSK---------YSSKSDVWSFGVLMWEVFSEGKTPYENR 205 (256)
T ss_pred cccccCCCccchhhcCHhHhccCC---------cChHHHHHHHHHHHHHHHcCCCCCCCcC
Confidence 1 1122345799999875443 4679999999999999998 99998543
No 270
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=99.97 E-value=5.4e-31 Score=278.32 Aligned_cols=197 Identities=19% Similarity=0.295 Sum_probs=163.8
Q ss_pred CCCCccceeecCCcceEEEEEEc-CCc----EEEEEEeeccccC--HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGILE-GGI----PVVIKRIDLQSVK--TEAYLLELDFFSKVSHARLVPLLGHCMERENEKF 606 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~----~vavK~l~~~~~~--~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~ 606 (766)
++|+..+.||+|+||.||+|... +|. .||+|.+...... .+++.+|++++++++||||++++++|.. ...+
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~ 84 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS--SQVQ 84 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec--CceE
Confidence 45778899999999999999853 333 6899988655432 4678999999999999999999998875 5789
Q ss_pred EEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchh
Q 004248 607 LVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSE 686 (766)
Q Consensus 607 lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~ 686 (766)
+||||+++|+|.+++++... .+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||.
T Consensus 85 ~v~e~~~~g~L~~~l~~~~~------~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kL~dfg~ 155 (279)
T cd05057 85 LITQLMPLGCLLDYVRNHKD------NIGSQYLLNWCVQIAKGMSYLEEK---RLVHRDLAARNVLVKTPQHVKITDFGL 155 (279)
T ss_pred EEEecCCCCcHHHHHHhccC------CCCHHHHHHHHHHHHHHHHHHHhC---CEEecccCcceEEEcCCCeEEECCCcc
Confidence 99999999999999976432 389999999999999999999997 999999999999999999999999999
Q ss_pred hhhcCCCCc-----cceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCCCc
Q 004248 687 VCAQGGDAH-----QSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLSSR 750 (766)
Q Consensus 687 a~~~~~~~~-----~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~~~ 750 (766)
++....... ...++..|++||...... ++.++|||||||++||++| |+.||....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~---------~~~~~Di~slG~~l~el~~~g~~p~~~~~ 216 (279)
T cd05057 156 AKLLDVDEKEYHAEGGKVPIKWMALESILHRI---------YTHKSDVWSYGVTVWELMTFGAKPYEGIP 216 (279)
T ss_pred cccccCcccceecCCCcccccccCHHHhhcCC---------cCchhhHHHHHHHHHHHhcCCCCCCCCCC
Confidence 986532211 112245699999765433 4789999999999999999 999986543
No 271
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=99.97 E-value=4.1e-31 Score=275.45 Aligned_cols=190 Identities=22% Similarity=0.350 Sum_probs=160.3
Q ss_pred ceeecCCcceEEEEEEcC--C--cEEEEEEeecccc-C-HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEeeCC
Q 004248 540 NLIKNGHSGDLFRGILEG--G--IPVVIKRIDLQSV-K-TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMP 613 (766)
Q Consensus 540 ~~ig~G~~g~Vy~~~~~~--g--~~vavK~l~~~~~-~-~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey~~ 613 (766)
++||+|++|.||+|...+ + ..||||.+..... . .++|.+|++++++++||||+++++++.. ...++||||++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--~~~~~v~e~~~ 78 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT--HPLMMVTELAP 78 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC--CeEEEEEEecC
Confidence 468999999999998533 3 3699999976555 2 5689999999999999999999998765 67999999999
Q ss_pred CCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcCCC
Q 004248 614 NGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGD 693 (766)
Q Consensus 614 ~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~~~ 693 (766)
+|+|.+++.+... ..++|.....++.|++.||+|||+. +++||||||+||+++.++.+||+|||+++.....
T Consensus 79 ~~~L~~~l~~~~~-----~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~ 150 (257)
T cd05040 79 LGSLLDRLRKDAL-----GHFLISTLCDYAVQIANGMRYLESK---RFIHRDLAARNILLASDDKVKIGDFGLMRALPQN 150 (257)
T ss_pred CCcHHHHHHhccc-----ccCcHHHHHHHHHHHHHHHHHHHhC---CccccccCcccEEEecCCEEEecccccccccccc
Confidence 9999999976431 2489999999999999999999997 9999999999999999999999999999876331
Q ss_pred C------ccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCC
Q 004248 694 A------HQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLS 748 (766)
Q Consensus 694 ~------~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~ 748 (766)
. ....++..|++||...... ++.++|||||||++|||+| |+.||..
T Consensus 151 ~~~~~~~~~~~~~~~y~~pE~~~~~~---------~~~~~Di~slG~~l~el~t~g~~p~~~ 203 (257)
T cd05040 151 EDHYVMEEHLKVPFAWCAPESLRTRT---------FSHASDVWMFGVTLWEMFTYGEEPWAG 203 (257)
T ss_pred ccceecccCCCCCceecCHHHhcccC---------cCchhhhHHHHHHHHHHHhCCCCCCCC
Confidence 1 1233566799999765433 4789999999999999999 9999853
No 272
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=99.97 E-value=4.5e-31 Score=280.97 Aligned_cols=204 Identities=15% Similarity=0.250 Sum_probs=165.1
Q ss_pred hCCCCccceeecCCcceEEEEEEc------CCcEEEEEEeeccccC--HHHHHHHHHHHhhc-CCCCcccceeEEEecCC
Q 004248 533 TGDFSDANLIKNGHSGDLFRGILE------GGIPVVIKRIDLQSVK--TEAYLLELDFFSKV-SHARLVPLLGHCMEREN 603 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~--~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~ 603 (766)
.++|+..+.||+|+||.||+|... ....||+|.+...... ..++.+|++++.++ +||||+++++++.. ++
T Consensus 11 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~-~~ 89 (293)
T cd05053 11 RDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQ-EG 89 (293)
T ss_pred HhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcC-CC
Confidence 356888899999999999999853 2368999998654322 35688999999999 89999999998865 56
Q ss_pred cEEEEEeeCCCCChhhhhhccCCC---------CCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeC
Q 004248 604 EKFLVYKYMPNGDLSSSLYRKTNT---------EDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLD 674 (766)
Q Consensus 604 ~~~lV~Ey~~~GsL~~~l~~~~~~---------~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~ 674 (766)
..++||||+++|+|.++++++... ......++|..++.++.|++.||+|||+. +|+||||||+||+++
T Consensus 90 ~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~Nil~~ 166 (293)
T cd05053 90 PLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASK---KCIHRDLAARNVLVT 166 (293)
T ss_pred CeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CccccccceeeEEEc
Confidence 899999999999999999753210 01224589999999999999999999987 999999999999999
Q ss_pred CCCcEEeccchhhhhcCCCC-----ccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCC
Q 004248 675 DKFEVRLGSLSEVCAQGGDA-----HQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLS 748 (766)
Q Consensus 675 ~~~~~kl~DFG~a~~~~~~~-----~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~ 748 (766)
+++.+||+|||+++...... ....++..|+|||...... ++.++|||||||++|||++ |..||..
T Consensus 167 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~Di~slG~il~el~~~g~~p~~~ 237 (293)
T cd05053 167 EDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRV---------YTHQSDVWSFGVLLWEIFTLGGSPYPG 237 (293)
T ss_pred CCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCC---------cCcccceeehhhHHHHHhcCCCCCCCC
Confidence 99999999999998653211 1122345699999875443 4789999999999999998 9999854
Q ss_pred C
Q 004248 749 S 749 (766)
Q Consensus 749 ~ 749 (766)
.
T Consensus 238 ~ 238 (293)
T cd05053 238 I 238 (293)
T ss_pred C
Confidence 3
No 273
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=99.97 E-value=1.9e-31 Score=281.45 Aligned_cols=192 Identities=21% Similarity=0.289 Sum_probs=163.4
Q ss_pred CCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC--HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEeeC
Q 004248 536 FSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK--TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYM 612 (766)
Q Consensus 536 ~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~--~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey~ 612 (766)
|+..+.||+|+||.||+|.. .+++.||+|.++..... .+.+.+|++++++++||||+++++++.. ++..|+||||+
T Consensus 6 y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~ 84 (277)
T cd06642 6 FTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLK-GTKLWIIMEYL 84 (277)
T ss_pred HHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhccccc-CCceEEEEEcc
Confidence 55678899999999999985 56889999998644322 4578999999999999999999997765 56899999999
Q ss_pred CCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcCC
Q 004248 613 PNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGG 692 (766)
Q Consensus 613 ~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~~ 692 (766)
++|+|.+++... .+++..+..++.|+++|++|||+. +++|+||||+||++++++.+|++|||+++....
T Consensus 85 ~~~~L~~~~~~~--------~~~~~~~~~~~~~i~~~l~~lH~~---~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~ 153 (277)
T cd06642 85 GGGSALDLLKPG--------PLEETYIATILREILKGLDYLHSE---RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTD 153 (277)
T ss_pred CCCcHHHHhhcC--------CCCHHHHHHHHHHHHHHHHHHhcC---CeeccCCChheEEEeCCCCEEEccccccccccC
Confidence 999999988532 388999999999999999999997 999999999999999999999999999976532
Q ss_pred CC---ccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 693 DA---HQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 693 ~~---~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
.. ....++..|+|||...... ++.++|||||||++|||+||+.|+..
T Consensus 154 ~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~Dv~slG~il~el~tg~~p~~~ 203 (277)
T cd06642 154 TQIKRNTFVGTPFWMAPEVIKQSA---------YDFKADIWSLGITAIELAKGEPPNSD 203 (277)
T ss_pred cchhhhcccCcccccCHHHhCcCC---------CchhhhHHHHHHHHHHHHhCCCCCcc
Confidence 21 2234678899999876443 47899999999999999999999853
No 274
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=99.97 E-value=5.2e-31 Score=277.16 Aligned_cols=197 Identities=21% Similarity=0.358 Sum_probs=157.3
Q ss_pred ceeecCCcceEEEEEEc-CCc--EEEEEEeecccc--CHHHHHHHHHHHhhc-CCCCcccceeEEEecCCcEEEEEeeCC
Q 004248 540 NLIKNGHSGDLFRGILE-GGI--PVVIKRIDLQSV--KTEAYLLELDFFSKV-SHARLVPLLGHCMERENEKFLVYKYMP 613 (766)
Q Consensus 540 ~~ig~G~~g~Vy~~~~~-~g~--~vavK~l~~~~~--~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~~lV~Ey~~ 613 (766)
++||+|+||.||+|+.. ++. .+|+|.+..... ..+.+.+|+++++++ +||||+++++++.. .+..++||||++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~-~~~~~lv~e~~~ 79 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEH-RGYLYLAIEYAP 79 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEec-CCCceEEEEeCC
Confidence 46899999999999964 444 578888864322 246789999999999 89999999998765 567899999999
Q ss_pred CCChhhhhhccCCCC---------CcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccc
Q 004248 614 NGDLSSSLYRKTNTE---------DDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684 (766)
Q Consensus 614 ~GsL~~~l~~~~~~~---------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DF 684 (766)
+|+|.++++...... .....+++.++..++.|++.|++|||+. +++||||||+||++++++.+|++||
T Consensus 80 ~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nili~~~~~~kl~df 156 (270)
T cd05047 80 HGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADF 156 (270)
T ss_pred CCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccccceEEEcCCCeEEECCC
Confidence 999999997543100 1123589999999999999999999987 9999999999999999999999999
Q ss_pred hhhhhcCCCC--ccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCCC
Q 004248 685 SEVCAQGGDA--HQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLSS 749 (766)
Q Consensus 685 G~a~~~~~~~--~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~~ 749 (766)
|+++...... .....+..|+|||...... ++.++|||||||++|||+| |+.||...
T Consensus 157 gl~~~~~~~~~~~~~~~~~~y~apE~~~~~~---------~~~~~Di~slG~il~el~~~g~~pf~~~ 215 (270)
T cd05047 157 GLSRGQEVYVKKTMGRLPVRWMAIESLNYSV---------YTTNSDVWSYGVLLWEIVSLGGTPYCGM 215 (270)
T ss_pred CCccccchhhhccCCCCccccCChHHHccCC---------CCchhhHHHHHHHHHHHHcCCCCCcccc
Confidence 9986432111 1112345699999774433 4789999999999999997 99998543
No 275
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.97 E-value=4.3e-31 Score=288.07 Aligned_cols=205 Identities=16% Similarity=0.228 Sum_probs=172.2
Q ss_pred ccHHHHHHHhCCCCccceeecCCcceEEEEE-EcCCcEEEEEEeecccc---CHHHHHHHHHHHhhcCCCCcccceeEEE
Q 004248 524 FTYQQLLAATGDFSDANLIKNGHSGDLFRGI-LEGGIPVVIKRIDLQSV---KTEAYLLELDFFSKVSHARLVPLLGHCM 599 (766)
Q Consensus 524 ~~~~~l~~~~~~~~~~~~ig~G~~g~Vy~~~-~~~g~~vavK~l~~~~~---~~~~~~~E~~~l~~l~H~niv~l~~~~~ 599 (766)
...+++...+++|+..+.||+|+||.||+|. ..+++.||+|++..... ..+.+.+|++++++++||||+++++++.
T Consensus 7 ~~~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~ 86 (345)
T cd07877 7 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT 86 (345)
T ss_pred hHHHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeee
Confidence 4456777888999999999999999999998 46799999999865322 2457889999999999999999999765
Q ss_pred ec-----CCcEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeC
Q 004248 600 ER-----ENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLD 674 (766)
Q Consensus 600 ~~-----~~~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~ 674 (766)
.. ....|+++|++ +++|.+++..+ .+++..+..++.|+++||+|||+. +|+||||||+||+++
T Consensus 87 ~~~~~~~~~~~~lv~~~~-~~~L~~~~~~~--------~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~ 154 (345)
T cd07877 87 PARSLEEFNDVYLVTHLM-GADLNNIVKCQ--------KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVN 154 (345)
T ss_pred ecccccccccEEEEehhc-ccCHHHHHhcC--------CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEc
Confidence 32 13478888887 67998887532 389999999999999999999997 999999999999999
Q ss_pred CCCcEEeccchhhhhcCCCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 675 DKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 675 ~~~~~kl~DFG~a~~~~~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
+++.+||+|||+++..........++..|+|||....... ++.++|||||||++|||++|+.||..
T Consensus 155 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~--------~~~~~DvwslG~il~el~~g~~pf~~ 220 (345)
T cd07877 155 EDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMH--------YNQTVDIWSVGCIMAELLTGRTLFPG 220 (345)
T ss_pred CCCCEEEecccccccccccccccccCCCccCHHHHhCccC--------CCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 9999999999999876555555677889999998654221 47899999999999999999999843
No 276
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=99.97 E-value=4.5e-31 Score=281.44 Aligned_cols=202 Identities=19% Similarity=0.335 Sum_probs=162.5
Q ss_pred CCCCccceeecCCcceEEEEEEcC---------------CcEEEEEEeeccccC--HHHHHHHHHHHhhcCCCCccccee
Q 004248 534 GDFSDANLIKNGHSGDLFRGILEG---------------GIPVVIKRIDLQSVK--TEAYLLELDFFSKVSHARLVPLLG 596 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~~~---------------g~~vavK~l~~~~~~--~~~~~~E~~~l~~l~H~niv~l~~ 596 (766)
++|+..+.||+|+||.||+|.... ...||+|.++..... .+.|.+|++++++++||||+++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~ 84 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG 84 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence 468888999999999999987432 235899998654322 457999999999999999999999
Q ss_pred EEEecCCcEEEEEeeCCCCChhhhhhccCCC-----CCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCe
Q 004248 597 HCMERENEKFLVYKYMPNGDLSSSLYRKTNT-----EDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSI 671 (766)
Q Consensus 597 ~~~~~~~~~~lV~Ey~~~GsL~~~l~~~~~~-----~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NI 671 (766)
++.. .+..++||||+++|+|.+++...... ......++|.++..++.|++.||+|||+. +++||||||+||
T Consensus 85 ~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Ni 160 (295)
T cd05097 85 VCVS-DDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASL---NFVHRDLATRNC 160 (295)
T ss_pred EEcC-CCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhc---CeeccccChhhE
Confidence 8865 56899999999999999999653210 01113478999999999999999999997 999999999999
Q ss_pred eeCCCCcEEeccchhhhhcCCCC-----ccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc--CCC
Q 004248 672 LLDDKFEVRLGSLSEVCAQGGDA-----HQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF--NNH 744 (766)
Q Consensus 672 Ll~~~~~~kl~DFG~a~~~~~~~-----~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt--G~~ 744 (766)
++++++.+||+|||+++...... ....++..|+|||....+. ++.++|||||||++|||++ |..
T Consensus 161 ll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~DvwSlG~~l~el~~~~~~~ 231 (295)
T cd05097 161 LVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGK---------FTTASDVWAFGVTLWEMFTLCKEQ 231 (295)
T ss_pred EEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCC---------cCchhhHHHHHHHHHHHHHcCCCC
Confidence 99999999999999987642211 1123356799999875443 4789999999999999998 567
Q ss_pred CCCC
Q 004248 745 LNLS 748 (766)
Q Consensus 745 p~~~ 748 (766)
||..
T Consensus 232 p~~~ 235 (295)
T cd05097 232 PYSL 235 (295)
T ss_pred CCcc
Confidence 7753
No 277
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=99.97 E-value=7.4e-31 Score=275.95 Aligned_cols=199 Identities=19% Similarity=0.281 Sum_probs=159.0
Q ss_pred CccceeecCCcceEEEEEEcC-Cc--EEEEEEeecccc---CHHHHHHHHHHHhhcCCCCcccceeEEEecC-----CcE
Q 004248 537 SDANLIKNGHSGDLFRGILEG-GI--PVVIKRIDLQSV---KTEAYLLELDFFSKVSHARLVPLLGHCMERE-----NEK 605 (766)
Q Consensus 537 ~~~~~ig~G~~g~Vy~~~~~~-g~--~vavK~l~~~~~---~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-----~~~ 605 (766)
...++||+|+||.||+|+..+ +. .||+|.++.... ..+.|.+|++++++++||||++++++|.... ...
T Consensus 2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 81 (272)
T cd05075 2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSP 81 (272)
T ss_pred ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCc
Confidence 456889999999999999644 33 699998865422 2467899999999999999999999875421 246
Q ss_pred EEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccch
Q 004248 606 FLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLS 685 (766)
Q Consensus 606 ~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG 685 (766)
++||||+++|+|.+++..... ......++|.....++.|++.||+|||+. +|+||||||+|||+++++.+||+|||
T Consensus 82 ~~v~e~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg 157 (272)
T cd05075 82 VVILPFMKHGDLHSFLLYSRL-GDCPQYLPTQMLVKFMTDIASGMEYLSSK---SFIHRDLAARNCMLNENMNVCVADFG 157 (272)
T ss_pred EEEEEeCCCCcHHHHHHHhcc-cCCcccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhheEEcCCCCEEECCCC
Confidence 899999999999998753221 11223589999999999999999999997 99999999999999999999999999
Q ss_pred hhhhcCCCC-----ccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCC
Q 004248 686 EVCAQGGDA-----HQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLS 748 (766)
Q Consensus 686 ~a~~~~~~~-----~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~ 748 (766)
+++...... ....++..|++||...... ++.++|||||||++|||++ |+.||..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~---------~~~~~Di~slG~il~el~~~g~~p~~~ 217 (272)
T cd05075 158 LSKKIYNGDYYRQGRIAKMPVKWIAIESLADRV---------YTTKSDVWSFGVTMWEIATRGQTPYPG 217 (272)
T ss_pred cccccCcccceecCCcccCCcccCCHHHccCCC---------cChHHHHHHHHHHHHHHHcCCCCCCCC
Confidence 998653221 1123455789999775433 4789999999999999999 7888853
No 278
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=99.97 E-value=6.7e-31 Score=278.30 Aligned_cols=194 Identities=19% Similarity=0.235 Sum_probs=165.8
Q ss_pred CCCccceeecCCcceEEEEEE-cCCcEEEEEEeecccc---CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEe
Q 004248 535 DFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV---KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYK 610 (766)
Q Consensus 535 ~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~E 610 (766)
+|+..+.||+|+||.||+|.. .+|+.||||++..... ..+.+.+|++++++++||||+++++++.. ++..++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~~~v~e 79 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPH-GSGFVLVME 79 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEec-CCeeEEEec
Confidence 477889999999999999995 5789999999976442 24679999999999999999999998765 568999999
Q ss_pred eCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhc
Q 004248 611 YMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQ 690 (766)
Q Consensus 611 y~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~ 690 (766)
|+ +++|.+++.... ..+++.++..++.||++||+|||+. +|+||||||+||++++++.+||+|||.+...
T Consensus 80 ~~-~~~L~~~~~~~~------~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~ 149 (286)
T cd07832 80 YM-PSDLSEVLRDEE------RPLPEAQVKSYMRMLLKGVAYMHAN---GIMHRDLKPANLLISADGVLKIADFGLARLF 149 (286)
T ss_pred cc-CCCHHHHHHhcC------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCHHHEEEcCCCcEEEeeeeecccc
Confidence 99 999999987543 2489999999999999999999997 9999999999999999999999999998866
Q ss_pred CCC----CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCC
Q 004248 691 GGD----AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNL 747 (766)
Q Consensus 691 ~~~----~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~ 747 (766)
... .....++..|+|||....... ++.++||||+||++|||+||++||.
T Consensus 150 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~--------~~~~~Di~slG~~l~~l~tg~~~~~ 202 (286)
T cd07832 150 SEEEPRLYSHQVATRWYRAPELLYGARK--------YDPGVDLWAVGCIFAELLNGSPLFP 202 (286)
T ss_pred cCCCCCccccccCcccccCceeeecccc--------CCchhHHHHHHHHHHHHHcCCcCcC
Confidence 332 234567889999998753321 4789999999999999999987764
No 279
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=99.97 E-value=6.2e-31 Score=283.18 Aligned_cols=198 Identities=21% Similarity=0.234 Sum_probs=166.7
Q ss_pred CCCCccceeecCCcceEEEEEEc-CCcEEEEEEeeccccC----HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGILE-GGIPVVIKRIDLQSVK----TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLV 608 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~----~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV 608 (766)
++|+..+.||+|+||.||+|... +++.||+|.+...... .+.+.+|++++++++||||+++++.+.. ++..|+|
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~lv 79 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQT-ETYLCLV 79 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeec-CCEEEEE
Confidence 46888899999999999999954 5899999999764432 3568899999999999999999997765 5689999
Q ss_pred EeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhh
Q 004248 609 YKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVC 688 (766)
Q Consensus 609 ~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~ 688 (766)
|||+++|+|.+++.+... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++.
T Consensus 80 ~e~~~~~~L~~~~~~~~~-----~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~ 151 (316)
T cd05574 80 MDYCPGGELFRLLQRQPG-----KCLSEEVARFYAAEVLLALEYLHLL---GIVYRDLKPENILLHESGHIMLSDFDLSK 151 (316)
T ss_pred EEecCCCCHHHHHHhCCC-----CccCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChHHeEEcCCCCEEEeecchhh
Confidence 999999999999875432 3589999999999999999999987 99999999999999999999999999986
Q ss_pred hcCCCC--------------------------------ccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHH
Q 004248 689 AQGGDA--------------------------------HQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPL 736 (766)
Q Consensus 689 ~~~~~~--------------------------------~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl 736 (766)
...... ....++..|+|||...... ++.++|||||||++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~---------~~~~~Di~slG~ll 222 (316)
T cd05574 152 QSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDG---------HGSAVDWWTLGILL 222 (316)
T ss_pred cccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCC---------CCchHHHHHHHHHH
Confidence 542110 1224677899999875433 47899999999999
Q ss_pred HHHhcCCCCCCCC
Q 004248 737 FSAIFNNHLNLSS 749 (766)
Q Consensus 737 ~elltG~~p~~~~ 749 (766)
|||++|+.||...
T Consensus 223 ~~l~~g~~pf~~~ 235 (316)
T cd05574 223 YEMLYGTTPFKGS 235 (316)
T ss_pred HHHhhCCCCCCCC
Confidence 9999999999543
No 280
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=99.97 E-value=7.6e-31 Score=275.05 Aligned_cols=193 Identities=20% Similarity=0.352 Sum_probs=163.2
Q ss_pred CCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC----------HHHHHHHHHHHhhcCCCCcccceeEEEecCCc
Q 004248 536 FSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK----------TEAYLLELDFFSKVSHARLVPLLGHCMERENE 604 (766)
Q Consensus 536 ~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~----------~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 604 (766)
|.....||+|+||.||+|.. .+++.||+|.+...... .+.+.+|++++++++||||+++++++.+ ++.
T Consensus 2 ~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~ 80 (267)
T cd06628 2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLD-ADH 80 (267)
T ss_pred ccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEe-CCc
Confidence 55678999999999999985 56889999988643211 2468899999999999999999998766 568
Q ss_pred EEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccc
Q 004248 605 KFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684 (766)
Q Consensus 605 ~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DF 684 (766)
.++||||+++++|.+++.+.. .+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+||
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~~-------~l~~~~~~~~~~~l~~~l~~lH~~---~ivH~di~p~nil~~~~~~~~l~df 150 (267)
T cd06628 81 LNIFLEYVPGGSVAALLNNYG-------AFEETLVRNFVRQILKGLNYLHNR---GIIHRDIKGANILVDNKGGIKISDF 150 (267)
T ss_pred cEEEEEecCCCCHHHHHHhcc-------CccHHHHHHHHHHHHHHHHHHHhc---CcccccCCHHHEEEcCCCCEEeccc
Confidence 899999999999999997543 388999999999999999999987 9999999999999999999999999
Q ss_pred hhhhhcCCCC---------ccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 685 SEVCAQGGDA---------HQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 685 G~a~~~~~~~---------~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
|.++...... ....++..|+|||...... ++.++||||+||++|||+||+.||..
T Consensus 151 g~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~---------~~~~~Dv~slG~il~~l~~g~~p~~~ 214 (267)
T cd06628 151 GISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTS---------YTRKADIWSLGCLVVEMLTGKHPFPD 214 (267)
T ss_pred CCCcccccccccCCccccccccCCCcCccChhHhccCC---------CCchhhhHHHHHHHHHHhhCCCCCCC
Confidence 9987653211 1234677899999875443 46789999999999999999999954
No 281
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=99.97 E-value=4.2e-31 Score=282.80 Aligned_cols=195 Identities=19% Similarity=0.319 Sum_probs=161.3
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCc----EEEEEEeeccccC--HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGI----PVVIKRIDLQSVK--TEAYLLELDFFSKVSHARLVPLLGHCMERENEKF 606 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~----~vavK~l~~~~~~--~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~ 606 (766)
++|+..+.||+|+||.||+|+. .+|. .||+|.+...... ..++.+|+.++++++||||++++++|.. ...+
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~--~~~~ 84 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLS--PTIQ 84 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcC--CCce
Confidence 4677889999999999999984 4454 5789988654322 3478999999999999999999998864 3578
Q ss_pred EEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchh
Q 004248 607 LVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSE 686 (766)
Q Consensus 607 lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~ 686 (766)
+|+||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+
T Consensus 85 ~v~e~~~~g~l~~~~~~~~------~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dikp~Nill~~~~~~kL~Dfg~ 155 (303)
T cd05110 85 LVTQLMPHGCLLDYVHEHK------DNIGSQLLLNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGL 155 (303)
T ss_pred eeehhcCCCCHHHHHHhcc------cCCCHHHHHHHHHHHHHHHHHHhhc---CeeccccccceeeecCCCceEEccccc
Confidence 9999999999999987543 2489999999999999999999997 999999999999999999999999999
Q ss_pred hhhcCCCC-----ccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCC
Q 004248 687 VCAQGGDA-----HQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLS 748 (766)
Q Consensus 687 a~~~~~~~-----~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~ 748 (766)
++...... ....++..|+|||...... ++.++|||||||++|||+| |+.||..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~---------~~~~~DiwslG~~l~el~t~g~~p~~~ 214 (303)
T cd05110 156 ARLLEGDEKEYNADGGKMPIKWMALECIHYRK---------FTHQSDVWSYGVTIWELMTFGGKPYDG 214 (303)
T ss_pred cccccCcccccccCCCccccccCCHHHhccCC---------CChHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 98653221 1223456799999875433 4789999999999999997 8999854
No 282
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=99.97 E-value=5.6e-31 Score=280.81 Aligned_cols=202 Identities=19% Similarity=0.318 Sum_probs=163.1
Q ss_pred CCCCccceeecCCcceEEEEEEc-----------------CCcEEEEEEeeccccC--HHHHHHHHHHHhhcCCCCcccc
Q 004248 534 GDFSDANLIKNGHSGDLFRGILE-----------------GGIPVVIKRIDLQSVK--TEAYLLELDFFSKVSHARLVPL 594 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~~-----------------~g~~vavK~l~~~~~~--~~~~~~E~~~l~~l~H~niv~l 594 (766)
++|+..+.||+|+||.||++... ++..||+|.+...... .++|.+|++++++++||||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~ 84 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRL 84 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence 46888999999999999998532 2457999998754322 4679999999999999999999
Q ss_pred eeEEEecCCcEEEEEeeCCCCChhhhhhccCCCC----CcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCC
Q 004248 595 LGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTE----DDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASS 670 (766)
Q Consensus 595 ~~~~~~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~----~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~N 670 (766)
++++.. ++..++||||+++|+|.+++....... .....+++.+...++.|++.||+|||+. +|+||||||+|
T Consensus 85 ~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dlkp~N 160 (296)
T cd05095 85 LAVCIT-SDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSL---NFVHRDLATRN 160 (296)
T ss_pred EEEEec-CCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CeecccCChhe
Confidence 998765 567899999999999999997643211 1123588999999999999999999997 99999999999
Q ss_pred eeeCCCCcEEeccchhhhhcCCCC-----ccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc--CC
Q 004248 671 ILLDDKFEVRLGSLSEVCAQGGDA-----HQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF--NN 743 (766)
Q Consensus 671 ILl~~~~~~kl~DFG~a~~~~~~~-----~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt--G~ 743 (766)
|++++++.+||+|||+++...... ....++..|++||....+. ++.++|||||||++|||+| |.
T Consensus 161 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~---------~~~~~DiwSlG~~l~el~~~~~~ 231 (296)
T cd05095 161 CLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGK---------FTTASDVWAFGVTLWEILTLCKE 231 (296)
T ss_pred EEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCC---------ccchhhhhHHHHHHHHHHHhCCC
Confidence 999999999999999997652211 1122345789999654443 4789999999999999998 77
Q ss_pred CCCCC
Q 004248 744 HLNLS 748 (766)
Q Consensus 744 ~p~~~ 748 (766)
.||..
T Consensus 232 ~p~~~ 236 (296)
T cd05095 232 QPYSQ 236 (296)
T ss_pred CCccc
Confidence 88854
No 283
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=99.97 E-value=8.3e-31 Score=272.91 Aligned_cols=196 Identities=21% Similarity=0.265 Sum_probs=166.3
Q ss_pred CCCccceeecCCcceEEEEEEc-CCcEEEEEEeecccc------CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEE
Q 004248 535 DFSDANLIKNGHSGDLFRGILE-GGIPVVIKRIDLQSV------KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFL 607 (766)
Q Consensus 535 ~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~------~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~l 607 (766)
+|+..+.||+|+||+||+|... +++.||+|.+..... ..+.+.+|++++++++||||+++++++.. ++..++
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~~l 79 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTERE-EDNLYI 79 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEec-CCeEEE
Confidence 3667789999999999999965 789999999865431 24578999999999999999999997765 568999
Q ss_pred EEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhh
Q 004248 608 VYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEV 687 (766)
Q Consensus 608 V~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a 687 (766)
||||+++++|.+++.+.. .+++..+..++.|++.|++|||+. +|+||||||+||++++++.+||+|||.+
T Consensus 80 v~e~~~~~~L~~~~~~~~-------~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~~~ni~~~~~~~~kl~d~~~~ 149 (258)
T cd06632 80 FLELVPGGSLAKLLKKYG-------SFPEPVIRLYTRQILLGLEYLHDR---NTVHRDIKGANILVDTNGVVKLADFGMA 149 (258)
T ss_pred EEEecCCCcHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccc
Confidence 999999999999997543 388999999999999999999987 9999999999999999999999999998
Q ss_pred hhcCCC--CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 688 CAQGGD--AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 688 ~~~~~~--~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
...... .....++..|++||...... . ++.++|+|||||++|||++|+.||...
T Consensus 150 ~~~~~~~~~~~~~~~~~y~~pe~~~~~~-~-------~~~~~D~~slG~~l~~l~~g~~pf~~~ 205 (258)
T cd06632 150 KQVVEFSFAKSFKGSPYWMAPEVIAQQG-G-------YGLAADIWSLGCTVLEMATGKPPWSQL 205 (258)
T ss_pred eeccccccccccCCCcceeCHHHhcCCC-C-------CCchhhhHHHHHHHHHHHhCCCCcccC
Confidence 765322 23445778899999865433 1 478999999999999999999999544
No 284
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=99.97 E-value=2.3e-31 Score=277.93 Aligned_cols=189 Identities=20% Similarity=0.257 Sum_probs=155.3
Q ss_pred ceeecCCcceEEEEEEc-C-------CcEEEEEEeeccccC-HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEe
Q 004248 540 NLIKNGHSGDLFRGILE-G-------GIPVVIKRIDLQSVK-TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYK 610 (766)
Q Consensus 540 ~~ig~G~~g~Vy~~~~~-~-------g~~vavK~l~~~~~~-~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~E 610 (766)
+.||+|+||.||+|... . ...||+|.+...... .+++.+|+.+++.++|||||++++++.. ++..++|||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~-~~~~~lv~e 79 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVC-GDESIMVQE 79 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEe-CCCcEEEEe
Confidence 46899999999999843 2 335889988654333 4678999999999999999999998876 467899999
Q ss_pred eCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCc--------EEec
Q 004248 611 YMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFE--------VRLG 682 (766)
Q Consensus 611 y~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~--------~kl~ 682 (766)
|+++|+|.++++.++. .++|..+..++.||+.||+|||+. +|+||||||+||+++.+++ +|++
T Consensus 80 ~~~~g~L~~~l~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~~~~~~~~~~l~ 150 (258)
T cd05078 80 YVKFGSLDTYLKKNKN------LINISWKLEVAKQLAWALHFLEDK---GLTHGNVCAKNVLLIREEDRKTGNPPFIKLS 150 (258)
T ss_pred cCCCCcHHHHHhcCCC------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEEecccccccCCCceEEec
Confidence 9999999999975432 489999999999999999999997 9999999999999988765 5999
Q ss_pred cchhhhhcCCCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCC-CCCC
Q 004248 683 SLSEVCAQGGDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNN-HLNL 747 (766)
Q Consensus 683 DFG~a~~~~~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~-~p~~ 747 (766)
|||++...... ....++..|+|||.+..... ++.++|||||||++|||++|. .|+.
T Consensus 151 d~g~~~~~~~~-~~~~~~~~y~aPE~~~~~~~--------~~~~~DiwslG~~l~~l~~g~~~~~~ 207 (258)
T cd05078 151 DPGISITVLPK-EILLERIPWVPPECIENPQN--------LSLAADKWSFGTTLWEIFSGGDKPLS 207 (258)
T ss_pred ccccccccCCc-hhccccCCccCchhccCCCC--------CCchhhHHHHHHHHHHHHcCCCCChh
Confidence 99988655322 22356778999998764322 478999999999999999995 5553
No 285
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=99.97 E-value=9.2e-31 Score=280.72 Aligned_cols=198 Identities=21% Similarity=0.262 Sum_probs=164.7
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC----HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK----TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLV 608 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~----~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV 608 (766)
+.|+..+.||+|+||.||+|+. .+++.||+|++...... .+++.+|++++++++||||++++++|.. ++..|+|
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~-~~~~~lv 93 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLR-EHTAWLV 93 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEe-CCeEEEE
Confidence 4588889999999999999985 46899999998643321 3568899999999999999999998876 5678999
Q ss_pred EeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhh
Q 004248 609 YKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVC 688 (766)
Q Consensus 609 ~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~ 688 (766)
|||++ |++.+++.... ..+++..+..++.|++.||.|||+. +|+||||||+||++++++.+||+|||++.
T Consensus 94 ~e~~~-g~l~~~~~~~~------~~l~~~~~~~~~~ql~~~L~~LH~~---~i~H~dl~p~nIl~~~~~~~kL~dfg~~~ 163 (307)
T cd06607 94 MEYCL-GSASDILEVHK------KPLQEVEIAAICHGALQGLAYLHSH---ERIHRDIKAGNILLTEPGTVKLADFGSAS 163 (307)
T ss_pred HHhhC-CCHHHHHHHcc------cCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEECCCCCEEEeecCcce
Confidence 99998 58877775432 2489999999999999999999987 99999999999999999999999999987
Q ss_pred hcCCCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 689 AQGGDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 689 ~~~~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
..... ....++..|+|||.......+. ++.++|||||||++|||+||+.||...
T Consensus 164 ~~~~~-~~~~~~~~y~aPE~~~~~~~~~------~~~~sDv~s~G~il~el~tg~~p~~~~ 217 (307)
T cd06607 164 LVSPA-NSFVGTPYWMAPEVILAMDEGQ------YDGKVDVWSLGITCIELAERKPPLFNM 217 (307)
T ss_pred ecCCC-CCccCCccccCceeeeccCCCC------CCcccchHHHHHHHHHHHcCCCCCCCc
Confidence 65322 3345678899999874322111 578999999999999999999998643
No 286
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=99.97 E-value=4.3e-31 Score=280.42 Aligned_cols=204 Identities=20% Similarity=0.272 Sum_probs=165.7
Q ss_pred hCCCCccceeecCCcceEEEEEEc------CCcEEEEEEeeccccC--HHHHHHHHHHHhhcCCCCcccceeEEEecCCc
Q 004248 533 TGDFSDANLIKNGHSGDLFRGILE------GGIPVVIKRIDLQSVK--TEAYLLELDFFSKVSHARLVPLLGHCMERENE 604 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~--~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 604 (766)
.++|+..+.||+|+||.||+|... ++..||+|.+...... .++|.+|++++++++||||+++++++.. ++.
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~-~~~ 82 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAV-GKP 82 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcC-CCc
Confidence 457888999999999999999853 4679999998654322 4579999999999999999999997765 567
Q ss_pred EEEEEeeCCCCChhhhhhccCCC---------------CCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCC
Q 004248 605 KFLVYKYMPNGDLSSSLYRKTNT---------------EDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQAS 669 (766)
Q Consensus 605 ~~lV~Ey~~~GsL~~~l~~~~~~---------------~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~ 669 (766)
.++||||+++|+|.+++...... ......+++.+++.++.|++.||+|||+. +++||||||+
T Consensus 83 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~---~i~H~dl~p~ 159 (288)
T cd05050 83 MCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSER---KFVHRDLATR 159 (288)
T ss_pred cEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CeecccccHh
Confidence 89999999999999999753210 01123588999999999999999999987 9999999999
Q ss_pred CeeeCCCCcEEeccchhhhhcCCC-----CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CC
Q 004248 670 SILLDDKFEVRLGSLSEVCAQGGD-----AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NN 743 (766)
Q Consensus 670 NILl~~~~~~kl~DFG~a~~~~~~-----~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~ 743 (766)
||++++++.+||+|||+++..... ......+..|+|||...... ++.++|||||||++|||++ |.
T Consensus 160 nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~Dv~slG~il~el~~~~~ 230 (288)
T cd05050 160 NCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNR---------YTTESDVWAYGVVLWEIFSYGM 230 (288)
T ss_pred heEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCC---------CCchhHHHHHHHHHHHHHhCCC
Confidence 999999999999999998754221 11122345699999765443 4789999999999999998 88
Q ss_pred CCCCCC
Q 004248 744 HLNLSS 749 (766)
Q Consensus 744 ~p~~~~ 749 (766)
.||...
T Consensus 231 ~p~~~~ 236 (288)
T cd05050 231 QPYYGM 236 (288)
T ss_pred CCCCCC
Confidence 898543
No 287
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=99.97 E-value=5.5e-31 Score=278.55 Aligned_cols=202 Identities=21% Similarity=0.275 Sum_probs=164.3
Q ss_pred CCCCccceeecCCcceEEEEEE------cCCcEEEEEEeeccccC-HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL------EGGIPVVIKRIDLQSVK-TEAYLLELDFFSKVSHARLVPLLGHCMERENEKF 606 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~------~~g~~vavK~l~~~~~~-~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~ 606 (766)
++|+..++||+|+||.||++.. .++..+|+|.+...... .+.|.+|++++++++||||+++++++.. .+..+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~ 83 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTE-GRPLL 83 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEec-CCceE
Confidence 3567789999999999999973 23668999988654333 5679999999999999999999997765 56789
Q ss_pred EEEeeCCCCChhhhhhccCCC--------CCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCc
Q 004248 607 LVYKYMPNGDLSSSLYRKTNT--------EDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFE 678 (766)
Q Consensus 607 lV~Ey~~~GsL~~~l~~~~~~--------~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~ 678 (766)
+||||+++|+|.++++..... ......++|.++..++.|++.|++|||+. +|+||||||+||++++++.
T Consensus 84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~nil~~~~~~ 160 (280)
T cd05092 84 MVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASL---HFVHRDLATRNCLVGQGLV 160 (280)
T ss_pred EEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHC---CeecccccHhhEEEcCCCC
Confidence 999999999999999754310 01113489999999999999999999987 9999999999999999999
Q ss_pred EEeccchhhhhcCCCC-----ccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCC
Q 004248 679 VRLGSLSEVCAQGGDA-----HQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLS 748 (766)
Q Consensus 679 ~kl~DFG~a~~~~~~~-----~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~ 748 (766)
+||+|||+++...... ....++..|+|||...... ++.++|||||||++|||+| |+.||..
T Consensus 161 ~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~Di~slG~il~el~~~g~~p~~~ 227 (280)
T cd05092 161 VKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRK---------FTTESDIWSFGVVLWEIFTYGKQPWYQ 227 (280)
T ss_pred EEECCCCceeEcCCCceeecCCCccccccccCHHHhccCC---------cCchhhHHHHHHHHHHHHcCCCCCCcc
Confidence 9999999987542211 1223356799999875443 4789999999999999998 8999854
No 288
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=99.97 E-value=8.2e-31 Score=279.21 Aligned_cols=195 Identities=19% Similarity=0.272 Sum_probs=166.9
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC-HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEee
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK-TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKY 611 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~-~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey 611 (766)
++|...+.||+|+||.||+|.. .+++.||+|.+...... .+.+.+|+.++++++||||+++++++.. ++..|+|+||
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~-~~~~~lv~e~ 97 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLV-GDELWVVMEY 97 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeee-CCcEEEEEec
Confidence 5688889999999999999984 57889999998654333 5678999999999999999999998866 5679999999
Q ss_pred CCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcC
Q 004248 612 MPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQG 691 (766)
Q Consensus 612 ~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~ 691 (766)
+++|+|.+++.+. .+++.++..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++....
T Consensus 98 ~~~~~L~~~~~~~--------~l~~~~~~~i~~~l~~al~~LH~~---gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~ 166 (293)
T cd06647 98 LAGGSLTDVVTET--------CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQIT 166 (293)
T ss_pred CCCCcHHHHHhhc--------CCCHHHHHHHHHHHHHHHHHHHhC---CEeeccCCHHHEEEcCCCCEEEccCcceeccc
Confidence 9999999998643 378999999999999999999997 99999999999999999999999999886553
Q ss_pred CC---CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 692 GD---AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 692 ~~---~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
.. .....++..|++||...... ++.++|||||||++||+++|+.||...
T Consensus 167 ~~~~~~~~~~~~~~y~~PE~~~~~~---------~~~~~Dv~slG~ll~~ll~g~~pf~~~ 218 (293)
T cd06647 167 PEQSKRSTMVGTPYWMAPEVVTRKA---------YGPKVDIWSLGIMAIEMVEGEPPYLNE 218 (293)
T ss_pred ccccccccccCChhhcCchhhccCC---------CCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 22 12235677899999875443 478999999999999999999999644
No 289
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=99.97 E-value=7.4e-31 Score=279.63 Aligned_cols=203 Identities=20% Similarity=0.318 Sum_probs=165.1
Q ss_pred hCCCCccceeecCCcceEEEEEEcC-----------------CcEEEEEEeecccc--CHHHHHHHHHHHhhcCCCCccc
Q 004248 533 TGDFSDANLIKNGHSGDLFRGILEG-----------------GIPVVIKRIDLQSV--KTEAYLLELDFFSKVSHARLVP 593 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~~~~-----------------g~~vavK~l~~~~~--~~~~~~~E~~~l~~l~H~niv~ 593 (766)
.++|+..+.||+|+||.||+|.... +..||+|.+..... ..++|.+|++++++++||||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~ 83 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR 83 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 3568889999999999999988432 24689999875432 2567999999999999999999
Q ss_pred ceeEEEecCCcEEEEEeeCCCCChhhhhhccCCCC----CcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCC
Q 004248 594 LLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTE----DDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQAS 669 (766)
Q Consensus 594 l~~~~~~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~----~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~ 669 (766)
+++++.. ++..++||||+++++|.+++.+..... .....+++..+..++.|++.||+|||+. +|+||||||+
T Consensus 84 ~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~---~i~H~dlkp~ 159 (296)
T cd05051 84 LLGVCTV-DPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESL---NFVHRDLATR 159 (296)
T ss_pred EEEEEec-CCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHc---Cccccccchh
Confidence 9998765 568999999999999999997644210 1123589999999999999999999987 9999999999
Q ss_pred CeeeCCCCcEEeccchhhhhcCCC-----CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc--C
Q 004248 670 SILLDDKFEVRLGSLSEVCAQGGD-----AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF--N 742 (766)
Q Consensus 670 NILl~~~~~~kl~DFG~a~~~~~~-----~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt--G 742 (766)
||++++++.+||+|||+++..... .....++..|+|||....+. ++.++|||||||++|||++ |
T Consensus 160 Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~Dv~slG~~l~el~~~~~ 230 (296)
T cd05051 160 NCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGK---------FTTKSDVWAFGVTLWEILTLCR 230 (296)
T ss_pred ceeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCC---------CCccchhhhhHHHHHHHHhcCC
Confidence 999999999999999998754221 11223456799999875433 5789999999999999998 6
Q ss_pred CCCCCC
Q 004248 743 NHLNLS 748 (766)
Q Consensus 743 ~~p~~~ 748 (766)
..||..
T Consensus 231 ~~p~~~ 236 (296)
T cd05051 231 EQPYEH 236 (296)
T ss_pred CCCCCC
Confidence 778753
No 290
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=99.97 E-value=7.7e-31 Score=276.90 Aligned_cols=194 Identities=21% Similarity=0.292 Sum_probs=165.2
Q ss_pred CCCccceeecCCcceEEEEEE-cCCcEEEEEEeecccc--CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEee
Q 004248 535 DFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV--KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKY 611 (766)
Q Consensus 535 ~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey 611 (766)
.|+..+.||+|+||.||+|.. .++..||+|.+..... ..+.+.+|++++++++||||+++++++.+ ++..++||||
T Consensus 5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~ 83 (277)
T cd06640 5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLK-GTKLWIIMEY 83 (277)
T ss_pred hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE-CCEEEEEEec
Confidence 466778999999999999995 4688999999875432 24678999999999999999999998766 5689999999
Q ss_pred CCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcC
Q 004248 612 MPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQG 691 (766)
Q Consensus 612 ~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~ 691 (766)
+++|+|.+++... .+++.+...++.|++.||+|||+. +++|+||||+||++++++.++++|||++....
T Consensus 84 ~~~~~L~~~i~~~--------~l~~~~~~~~~~~l~~~l~~lh~~---~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~ 152 (277)
T cd06640 84 LGGGSALDLLRAG--------PFDEFQIATMLKEILKGLDYLHSE---KKIHRDIKAANVLLSEQGDVKLADFGVAGQLT 152 (277)
T ss_pred CCCCcHHHHHhcC--------CCCHHHHHHHHHHHHHHHHHHHhC---CccCcCCChhhEEEcCCCCEEEcccccceecc
Confidence 9999999998642 378899999999999999999987 99999999999999999999999999997653
Q ss_pred CC---CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 692 GD---AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 692 ~~---~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
.. .....++..|.|||...... .+.++|||||||++|||+||+.||...
T Consensus 153 ~~~~~~~~~~~~~~y~apE~~~~~~---------~~~~~Dv~slG~il~el~tg~~p~~~~ 204 (277)
T cd06640 153 DTQIKRNTFVGTPFWMAPEVIQQSA---------YDSKADIWSLGITAIELAKGEPPNSDM 204 (277)
T ss_pred CCccccccccCcccccCHhHhccCC---------CccHHHHHHHHHHHHHHHHCCCCCCCc
Confidence 22 12235677899999875433 478999999999999999999998543
No 291
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.97 E-value=8.3e-31 Score=282.02 Aligned_cols=202 Identities=15% Similarity=0.265 Sum_probs=163.4
Q ss_pred CCCCccceeecCCcceEEEEEEc--------CCcEEEEEEeeccccC--HHHHHHHHHHHhhc-CCCCcccceeEEEecC
Q 004248 534 GDFSDANLIKNGHSGDLFRGILE--------GGIPVVIKRIDLQSVK--TEAYLLELDFFSKV-SHARLVPLLGHCMERE 602 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~~--------~g~~vavK~l~~~~~~--~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~ 602 (766)
++|...+.||+|+||.||+|+.. ....||+|.++..... ..++.+|+++++++ +||||++++++|.. +
T Consensus 12 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~-~ 90 (314)
T cd05099 12 DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQ-E 90 (314)
T ss_pred HHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEcc-C
Confidence 46778899999999999999731 2457999998654322 45788999999999 69999999998765 5
Q ss_pred CcEEEEEeeCCCCChhhhhhccCCC---------CCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeee
Q 004248 603 NEKFLVYKYMPNGDLSSSLYRKTNT---------EDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILL 673 (766)
Q Consensus 603 ~~~~lV~Ey~~~GsL~~~l~~~~~~---------~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl 673 (766)
+..|+||||+++|+|.+++...... ......++|.++..++.|++.||+|||+. +|+||||||+||++
T Consensus 91 ~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~Nill 167 (314)
T cd05099 91 GPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESR---RCIHRDLAARNVLV 167 (314)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHC---CeeeccccceeEEE
Confidence 6799999999999999999764321 01123589999999999999999999987 99999999999999
Q ss_pred CCCCcEEeccchhhhhcCCC-----CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCC
Q 004248 674 DDKFEVRLGSLSEVCAQGGD-----AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNL 747 (766)
Q Consensus 674 ~~~~~~kl~DFG~a~~~~~~-----~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~ 747 (766)
++++.+||+|||+++..... .....++..|+|||...... ++.++|||||||++|||++ |+.||.
T Consensus 168 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~DiwslG~~l~el~~~g~~p~~ 238 (314)
T cd05099 168 TEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRV---------YTHQSDVWSFGILMWEIFTLGGSPYP 238 (314)
T ss_pred cCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCC---------cCccchhhHHHHHHHHHHhCCCCCCC
Confidence 99999999999999865321 11122345799999875443 4789999999999999999 888885
Q ss_pred C
Q 004248 748 S 748 (766)
Q Consensus 748 ~ 748 (766)
.
T Consensus 239 ~ 239 (314)
T cd05099 239 G 239 (314)
T ss_pred C
Confidence 4
No 292
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=99.97 E-value=9.7e-31 Score=273.24 Aligned_cols=203 Identities=18% Similarity=0.240 Sum_probs=168.2
Q ss_pred CCCccceeecCCcceEEEEE-EcCCcEEEEEEeeccccC---HHHHHHHHHHHhhcCCCCcccceeEEEec-CCcEEEEE
Q 004248 535 DFSDANLIKNGHSGDLFRGI-LEGGIPVVIKRIDLQSVK---TEAYLLELDFFSKVSHARLVPLLGHCMER-ENEKFLVY 609 (766)
Q Consensus 535 ~~~~~~~ig~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~---~~~~~~E~~~l~~l~H~niv~l~~~~~~~-~~~~~lV~ 609 (766)
+|+..+.||+|+||.||+|. ..+++.||+|.+...... .+++.+|++++++++||||+++++++... +...+++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 47788999999999999998 467889999998654322 45788999999999999999999977542 34579999
Q ss_pred eeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCC--CCCeEecCCCCCCeeeCCCCcEEeccchhh
Q 004248 610 KYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHEC--TLPFVHRDVQASSILLDDKFEVRLGSLSEV 687 (766)
Q Consensus 610 Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~--~~~iiHrDlKp~NILl~~~~~~kl~DFG~a 687 (766)
||+++|+|.+++.+... ....+++.+++.++.|++.||+|||..+ ..+|+||||||+||++++++.+||+|||++
T Consensus 81 e~~~~~~L~~~l~~~~~---~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~ 157 (265)
T cd08217 81 EYCEGGDLAQLIQKCKK---ERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLA 157 (265)
T ss_pred hhccCCCHHHHHHHHhh---cccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEeccccc
Confidence 99999999999975321 1235899999999999999999999332 349999999999999999999999999999
Q ss_pred hhcCCCC---ccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 688 CAQGGDA---HQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 688 ~~~~~~~---~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
+...... ....++..|++||...... ++.++|||||||+++||++|+.||...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~pE~~~~~~---------~~~~~Dv~slG~il~~l~~g~~p~~~~ 213 (265)
T cd08217 158 KILGHDSSFAKTYVGTPYYMSPEQLNHMS---------YDEKSDIWSLGCLIYELCALSPPFTAR 213 (265)
T ss_pred ccccCCcccccccccCCCccChhhhcCCC---------CCchhHHHHHHHHHHHHHHCCCcccCc
Confidence 8764322 2346788999999876544 468999999999999999999999654
No 293
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=99.97 E-value=9.3e-31 Score=275.31 Aligned_cols=196 Identities=18% Similarity=0.275 Sum_probs=164.2
Q ss_pred CCCccceeecCCcceEEEEEE-cCCcEEEEEEeecccc---C--------HHHHHHHHHHHhhcCCCCcccceeEEEecC
Q 004248 535 DFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV---K--------TEAYLLELDFFSKVSHARLVPLLGHCMERE 602 (766)
Q Consensus 535 ~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~---~--------~~~~~~E~~~l~~l~H~niv~l~~~~~~~~ 602 (766)
+|...+.||+|+||.||+|.. .+|+.||+|.++.... . .+.+.+|++++++++||||+++++++.. .
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~ 80 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETT-E 80 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEecc-C
Confidence 366778999999999999984 5789999998854211 0 2468889999999999999999997765 5
Q ss_pred CcEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEec
Q 004248 603 NEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLG 682 (766)
Q Consensus 603 ~~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~ 682 (766)
+..++||||+++|+|.+++++.. .+++..+..++.|++.||.|||+. +++||||||+||++++++.+|++
T Consensus 81 ~~~~lv~e~~~~~~L~~~l~~~~-------~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~~~nil~~~~~~~~l~ 150 (272)
T cd06629 81 EYLSIFLEYVPGGSIGSCLRTYG-------RFEEQLVRFFTEQVLEGLAYLHSK---GILHRDLKADNLLVDADGICKIS 150 (272)
T ss_pred CceEEEEecCCCCcHHHHHhhcc-------CCCHHHHHHHHHHHHHHHHHHhhC---CeeecCCChhhEEEcCCCeEEEe
Confidence 68999999999999999997543 389999999999999999999997 99999999999999999999999
Q ss_pred cchhhhhcCCC-----CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 683 SLSEVCAQGGD-----AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 683 DFG~a~~~~~~-----~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
|||+++..... .....++..|+|||.......+ ++.++|||||||++||+++|+.||..
T Consensus 151 d~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~-------~~~~~Dv~slG~~l~~l~~g~~p~~~ 214 (272)
T cd06629 151 DFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQG-------YSAKVDIWSLGCVVLEMFAGRRPWSD 214 (272)
T ss_pred eccccccccccccccccccccCCccccCHHHhccccCC-------CCccchhHHHHHHHHHHHhCCCCCcC
Confidence 99998764322 1223567889999986544321 47899999999999999999999854
No 294
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=99.97 E-value=9.3e-31 Score=278.71 Aligned_cols=201 Identities=19% Similarity=0.212 Sum_probs=163.7
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC---HHHHHHHHHHHhhcC-CCCcccceeEEEecCC----c
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK---TEAYLLELDFFSKVS-HARLVPLLGHCMEREN----E 604 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~---~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~----~ 604 (766)
++|+..+.||+|+||.||+|.. .+++.||||+++..... .+.+.+|++++++++ ||||+++++++...+. .
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 4688899999999999999995 57899999998654322 457889999999995 6999999997765322 2
Q ss_pred EEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCC-CCcEEecc
Q 004248 605 KFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDD-KFEVRLGS 683 (766)
Q Consensus 605 ~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~-~~~~kl~D 683 (766)
.|+||||+++ +|.+++...... ....+++.++..++.||+.||+|||+. +|+||||||+||+++. ++.+||+|
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~~--~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~~~nil~~~~~~~~kl~d 154 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGRG--PGRPLPAKTIKSFMYQLLKGVAHCHKH---GVMHRDLKPQNLLVDKQKGLLKIAD 154 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhccc--CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEecCCCeEEEee
Confidence 7999999985 899988754321 123589999999999999999999997 9999999999999998 89999999
Q ss_pred chhhhhcCC---CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 684 LSEVCAQGG---DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 684 FG~a~~~~~---~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
||+++.... ......++..|+|||.+..... ++.++|||||||++|||+||+.||..
T Consensus 155 fg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~--------~~~~~Di~slG~~l~~l~~g~~~~~~ 214 (295)
T cd07837 155 LGLGRAFSIPVKSYTHEIVTLWYRAPEVLLGSTH--------YSTPVDIWSVGCIFAEMSRKQPLFPG 214 (295)
T ss_pred cccceecCCCccccCCcccccCCCChHHhhCCCC--------CCchHHHHHHHHHHHHHHcCCCCCCC
Confidence 999875422 1223356788999998753221 47899999999999999999999854
No 295
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=99.97 E-value=1.2e-30 Score=271.98 Aligned_cols=197 Identities=24% Similarity=0.407 Sum_probs=164.8
Q ss_pred ceeecCCcceEEEEEEcC----CcEEEEEEeeccccC--HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEeeCC
Q 004248 540 NLIKNGHSGDLFRGILEG----GIPVVIKRIDLQSVK--TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMP 613 (766)
Q Consensus 540 ~~ig~G~~g~Vy~~~~~~----g~~vavK~l~~~~~~--~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey~~ 613 (766)
+.||+|+||.||+|.... +..||+|.+...... .+.+.+|++++++++|+||+++++++.. ....++||||++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~~lv~e~~~ 79 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTE-EEPLYLVLEYME 79 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecC-CCceEEEEEecc
Confidence 479999999999999543 889999999765443 5689999999999999999999998776 668999999999
Q ss_pred CCChhhhhhccCCC--CCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcC
Q 004248 614 NGDLSSSLYRKTNT--EDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQG 691 (766)
Q Consensus 614 ~GsL~~~l~~~~~~--~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~ 691 (766)
+|+|.+++...... ......++|.++..++.|++.||+|||+. +|+||||||+||++++++.+||+|||.++...
T Consensus 80 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~nili~~~~~~~l~dfg~~~~~~ 156 (262)
T cd00192 80 GGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK---KFVHRDLAARNCLVGEDLVVKISDFGLSRDVY 156 (262)
T ss_pred CCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcC---CcccCccCcceEEECCCCcEEEcccccccccc
Confidence 99999999764210 00113589999999999999999999997 99999999999999999999999999998764
Q ss_pred CC-----CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCCC
Q 004248 692 GD-----AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLSS 749 (766)
Q Consensus 692 ~~-----~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~~ 749 (766)
.. .....++..|+|||...... ++.++||||+||++|||++ |+.||...
T Consensus 157 ~~~~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~Di~slG~il~~l~~~g~~p~~~~ 211 (262)
T cd00192 157 DDDYYRKKTGGKLPIRWMAPESLKDGI---------FTSKSDVWSFGVLLWEIFTLGATPYPGL 211 (262)
T ss_pred cccccccccCCCcCccccCHHHhccCC---------cchhhccHHHHHHHHHHHhcCCCCCCCC
Confidence 32 23345677899999775542 5789999999999999999 69998544
No 296
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=99.97 E-value=9.5e-31 Score=272.55 Aligned_cols=198 Identities=19% Similarity=0.237 Sum_probs=167.3
Q ss_pred CCCccceeecCCcceEEEEEE-cCCcEEEEEEeecccc---CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEe
Q 004248 535 DFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV---KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYK 610 (766)
Q Consensus 535 ~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~E 610 (766)
+|+..+.||+|+||.||++.. .+|+.||+|++..... ..+++.+|++++++++||||+++++++.+ .+..++|||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~lv~e 79 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEE-NGNLYIVMD 79 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecC-CCeEEEEEe
Confidence 478889999999999999984 5789999999875432 24579999999999999999999997655 568999999
Q ss_pred eCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhc
Q 004248 611 YMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQ 690 (766)
Q Consensus 611 y~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~ 690 (766)
|+++++|.+++..... ..+++.++..++.|++.|++|||+. +++|+||||+||+++.++.+||+|||++...
T Consensus 80 ~~~~~~l~~~~~~~~~-----~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~ 151 (256)
T cd08218 80 YCEGGDLYKKINAQRG-----VLFPEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTIKLGDFGIARVL 151 (256)
T ss_pred cCCCCcHHHHHHhccC-----CCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEEeeccceeec
Confidence 9999999999875432 2478999999999999999999987 9999999999999999999999999999765
Q ss_pred CCCC---ccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCCc
Q 004248 691 GGDA---HQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSSR 750 (766)
Q Consensus 691 ~~~~---~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~~ 750 (766)
.... ....++..|+|||...... .+.++|||||||+++||+||+.||...+
T Consensus 152 ~~~~~~~~~~~~~~~~~~pe~~~~~~---------~~~~~Dv~slG~i~~~l~~g~~~~~~~~ 205 (256)
T cd08218 152 NSTVELARTCIGTPYYLSPEICENRP---------YNNKSDIWALGCVLYEMCTLKHAFEAGN 205 (256)
T ss_pred CcchhhhhhccCCccccCHHHhCCCC---------CCCccchhHHHHHHHHHHcCCCCccCCC
Confidence 3321 2234677899999875433 4789999999999999999999986443
No 297
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=99.97 E-value=6.7e-32 Score=266.59 Aligned_cols=196 Identities=15% Similarity=0.189 Sum_probs=165.1
Q ss_pred HhCCCCcc-ceeecCCcceEEEEE-EcCCcEEEEEEeeccccCHHHHHHHHHHHhhc-CCCCcccceeEEEe---cCCcE
Q 004248 532 ATGDFSDA-NLIKNGHSGDLFRGI-LEGGIPVVIKRIDLQSVKTEAYLLELDFFSKV-SHARLVPLLGHCME---RENEK 605 (766)
Q Consensus 532 ~~~~~~~~-~~ig~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~---~~~~~ 605 (766)
.+++|... ++||-|-.|+|..+. ..+|+.+|+|.+... +..++|+++--.. .|||||+++++|.. ....+
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds----~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcL 134 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS----PKARREVELHWMASGHPHIVSIIDVYENSYQGRKCL 134 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC----HHHHhHhhhhhhhcCCCceEEeehhhhhhccCceee
Confidence 45566543 689999999999998 678999999998533 4567889876555 69999999997743 23467
Q ss_pred EEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCC---CCcEEec
Q 004248 606 FLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDD---KFEVRLG 682 (766)
Q Consensus 606 ~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~---~~~~kl~ 682 (766)
.+|||.|+||+|+..+..++. +++++.+.-.|+.||+.|+.|||+. .|.||||||+|+|... |-..|++
T Consensus 135 LiVmE~meGGeLfsriq~~g~-----~afTErea~eI~~qI~~Av~~lH~~---nIAHRDlKpENLLyt~t~~na~lKLt 206 (400)
T KOG0604|consen 135 LIVMECMEGGELFSRIQDRGD-----QAFTEREASEIMKQIGLAVRYLHSM---NIAHRDLKPENLLYTTTSPNAPLKLT 206 (400)
T ss_pred EeeeecccchHHHHHHHHccc-----ccchHHHHHHHHHHHHHHHHHHHhc---chhhccCChhheeeecCCCCcceEec
Confidence 899999999999999987654 5699999999999999999999998 9999999999999974 4569999
Q ss_pred cchhhhhcC--CCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 683 SLSEVCAQG--GDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 683 DFG~a~~~~--~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
|||+|+... ....+-+.|++|.|||+.....| +..+|+||+||++|-|+.|.+||.+
T Consensus 207 DfGFAK~t~~~~~L~TPc~TPyYvaPevlg~eKy---------dkscdmwSlgVimYIlLCGyPPFYS 265 (400)
T KOG0604|consen 207 DFGFAKETQEPGDLMTPCFTPYYVAPEVLGPEKY---------DKSCDMWSLGVIMYILLCGYPPFYS 265 (400)
T ss_pred ccccccccCCCccccCCcccccccCHHHhCchhc---------CCCCCccchhHHHHHhhcCCCcccc
Confidence 999999764 44556678999999999877664 6789999999999999999999953
No 298
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=99.97 E-value=4.1e-31 Score=282.26 Aligned_cols=191 Identities=25% Similarity=0.371 Sum_probs=162.5
Q ss_pred CccceeecCCcceEEEEEEc---C--CcEEEEEEeeccccC--HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEE
Q 004248 537 SDANLIKNGHSGDLFRGILE---G--GIPVVIKRIDLQSVK--TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVY 609 (766)
Q Consensus 537 ~~~~~ig~G~~g~Vy~~~~~---~--g~~vavK~l~~~~~~--~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~ 609 (766)
...++||+|-||.||+|... . ...||||.-+.+... .+.|++|.-+|++++|||||+++|+|.+ ...|+||
T Consensus 392 tl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e--~P~Wivm 469 (974)
T KOG4257|consen 392 TLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE--QPMWIVM 469 (974)
T ss_pred cHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec--cceeEEE
Confidence 34578999999999999832 2 346899987664433 7789999999999999999999999975 5799999
Q ss_pred eeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhh
Q 004248 610 KYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCA 689 (766)
Q Consensus 610 Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~ 689 (766)
|.++-|.|..+|..++. .++......++.||+.||+|||+. ++|||||.++|||+.+.--+|++|||++|.
T Consensus 470 EL~~~GELr~yLq~nk~------sL~l~tL~ly~~Qi~talaYLeSk---rfVHRDIAaRNiLVsSp~CVKLaDFGLSR~ 540 (974)
T KOG4257|consen 470 ELAPLGELREYLQQNKD------SLPLRTLTLYCYQICTALAYLESK---RFVHRDIAARNILVSSPQCVKLADFGLSRY 540 (974)
T ss_pred ecccchhHHHHHHhccc------cchHHHHHHHHHHHHHHHHHHHhh---chhhhhhhhhheeecCcceeeecccchhhh
Confidence 99999999999986553 488999999999999999999998 999999999999999999999999999998
Q ss_pred cCCCC--cccee--eecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCC
Q 004248 690 QGGDA--HQSRI--TRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNL 747 (766)
Q Consensus 690 ~~~~~--~~~~~--t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~ 747 (766)
..++. +.+.+ -.-|||||.+.... +|+++|||-|||.+||++. |.+||.
T Consensus 541 ~ed~~yYkaS~~kLPIKWmaPESINfRr---------FTtASDVWMFgVCmWEIl~lGvkPfq 594 (974)
T KOG4257|consen 541 LEDDAYYKASRGKLPIKWMAPESINFRR---------FTTASDVWMFGVCMWEILSLGVKPFQ 594 (974)
T ss_pred ccccchhhccccccceeecCccccchhc---------ccchhhHHHHHHHHHHHHHhcCCccc
Confidence 75432 22222 33589999886544 6899999999999999876 999994
No 299
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.97 E-value=9.5e-31 Score=285.03 Aligned_cols=195 Identities=17% Similarity=0.247 Sum_probs=163.9
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeecccc---CHHHHHHHHHHHhhcCCCCcccceeEEEecC-----Cc
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV---KTEAYLLELDFFSKVSHARLVPLLGHCMERE-----NE 604 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-----~~ 604 (766)
++|...+.||+|+||.||+|+. .+|+.||||++..... ..+.+.+|++++++++||||+++++++.... ..
T Consensus 15 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 94 (342)
T cd07879 15 ERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQD 94 (342)
T ss_pred cceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCce
Confidence 7899999999999999999994 5789999999864321 2456889999999999999999999775421 24
Q ss_pred EEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccc
Q 004248 605 KFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684 (766)
Q Consensus 605 ~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DF 684 (766)
.++|+||+.. +|.++.. ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 95 ~~lv~e~~~~-~l~~~~~---------~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dlkp~NIll~~~~~~kL~df 161 (342)
T cd07879 95 FYLVMPYMQT-DLQKIMG---------HPLSEDKVQYLVYQMLCGLKYIHSA---GIIHRDLKPGNLAVNEDCELKILDF 161 (342)
T ss_pred EEEEeccccc-CHHHHHc---------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeC
Confidence 6999999974 7776552 1388999999999999999999997 8999999999999999999999999
Q ss_pred hhhhhcCCCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 685 SEVCAQGGDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 685 G~a~~~~~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
|+++..........++..|+|||....... ++.++|||||||++|||++|+.||...
T Consensus 162 g~~~~~~~~~~~~~~~~~y~aPE~~~~~~~--------~~~~~Dv~slGvil~el~~g~~pf~~~ 218 (342)
T cd07879 162 GLARHADAEMTGYVVTRWYRAPEVILNWMH--------YNQTVDIWSVGCIMAEMLTGKTLFKGK 218 (342)
T ss_pred CCCcCCCCCCCCceeeecccChhhhcCccc--------cCchHHHHHHHHHHHHHHhCCCCCCCC
Confidence 999876555555677889999998754221 478999999999999999999999644
No 300
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=99.97 E-value=9.4e-31 Score=276.03 Aligned_cols=196 Identities=18% Similarity=0.247 Sum_probs=166.0
Q ss_pred CCCccceeecCCcceEEEEEE-cCCcEEEEEEeecccc--CHHHHHHHHHHHhhcC---CCCcccceeEEEecCCcEEEE
Q 004248 535 DFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV--KTEAYLLELDFFSKVS---HARLVPLLGHCMERENEKFLV 608 (766)
Q Consensus 535 ~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~--~~~~~~~E~~~l~~l~---H~niv~l~~~~~~~~~~~~lV 608 (766)
.|+..+.||+|+||.||+|.. .+++.||+|.++.... ..+++.+|++++++++ |||++++++++.. +...++|
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~-~~~~~lv 80 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLK-GPRLWII 80 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeee-CCEEEEE
Confidence 477788999999999999994 6789999999865432 2457889999999997 9999999998765 5679999
Q ss_pred EeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhh
Q 004248 609 YKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVC 688 (766)
Q Consensus 609 ~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~ 688 (766)
|||+++++|.+++... .+++.....++.|++.||.|||+. +|+||||||+||++++++.+||+|||++.
T Consensus 81 ~e~~~~~~L~~~~~~~--------~l~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~ 149 (277)
T cd06917 81 MEYAEGGSVRTLMKAG--------PIAEKYISVIIREVLVALKYIHKV---GVIHRDIKAANILVTNTGNVKLCDFGVAA 149 (277)
T ss_pred EecCCCCcHHHHHHcc--------CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHHEEEcCCCCEEEccCCcee
Confidence 9999999999998542 389999999999999999999987 99999999999999999999999999987
Q ss_pred hcCCC---CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCCc
Q 004248 689 AQGGD---AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSSR 750 (766)
Q Consensus 689 ~~~~~---~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~~ 750 (766)
..... .....++..|+|||....+.. ++.++|||||||++|||++|+.||...+
T Consensus 150 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~--------~~~~~Dv~slG~~l~~ll~g~~p~~~~~ 206 (277)
T cd06917 150 LLNQNSSKRSTFVGTPYWMAPEVITEGKY--------YDTKADIWSLGITIYEMATGNPPYSDVD 206 (277)
T ss_pred ecCCCccccccccCCcceeCHHHhccCCc--------cccchhHHHHHHHHHHHHhCCCCCCCCC
Confidence 65322 223457788999998654322 4789999999999999999999996443
No 301
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.97 E-value=1.1e-30 Score=280.42 Aligned_cols=198 Identities=22% Similarity=0.298 Sum_probs=165.0
Q ss_pred hCCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC---HHHHHHHHHHHhhcCCCCcccceeEEEecC-CcEEE
Q 004248 533 TGDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK---TEAYLLELDFFSKVSHARLVPLLGHCMERE-NEKFL 607 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~---~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~~~l 607 (766)
.++|+..+.||+|+||.||+|+. .+|+.||+|+++..... ...+.+|++++++++|+||+++++++.... +..++
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL 85 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence 46789999999999999999995 56999999998754322 335678999999999999999999876532 45899
Q ss_pred EEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhh
Q 004248 608 VYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEV 687 (766)
Q Consensus 608 V~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a 687 (766)
||||++ ++|.+++.... ..++|.++..++.|++.||+|||+. +++||||||+||++++++.+||+|||++
T Consensus 86 v~e~~~-~~l~~~l~~~~------~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~kL~dfg~~ 155 (309)
T cd07845 86 VMEYCE-QDLASLLDNMP------TPFSESQVKCLMLQLLRGLQYLHEN---FIIHRDLKVSNLLLTDKGCLKIADFGLA 155 (309)
T ss_pred EEecCC-CCHHHHHHhcc------cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECcccee
Confidence 999997 48988886532 2489999999999999999999998 9999999999999999999999999999
Q ss_pred hhcCCC---CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 688 CAQGGD---AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 688 ~~~~~~---~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
+..... .....++..|+|||....... ++.++||||+||++|||++|+.||..
T Consensus 156 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~--------~~~~~DvwslG~il~el~~g~~~f~~ 211 (309)
T cd07845 156 RTYGLPAKPMTPKVVTLWYRAPELLLGCTT--------YTTAIDMWAVGCILAELLAHKPLLPG 211 (309)
T ss_pred eecCCccCCCCcccccccccChhhhcCCCC--------cCchHHHHHHHHHHHHHHhCCCCCCC
Confidence 865322 223345778999998754321 47899999999999999999999854
No 302
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=99.97 E-value=1.8e-30 Score=270.26 Aligned_cols=198 Identities=20% Similarity=0.246 Sum_probs=166.8
Q ss_pred CCCccceeecCCcceEEEEEE-cCCcEEEEEEeecccc---CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEe
Q 004248 535 DFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV---KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYK 610 (766)
Q Consensus 535 ~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~E 610 (766)
+|+..+.||+|+||.||+|.. .+++.+|||++..... ..+.+.+|++++++++||||+++++.+.. ++..++|||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~~lv~e 79 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLE-DKALMIVME 79 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEec-CCEEEEEEe
Confidence 477889999999999999984 5788999999975432 25678999999999999999999997654 568999999
Q ss_pred eCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCC-CcEEeccchhhhh
Q 004248 611 YMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDK-FEVRLGSLSEVCA 689 (766)
Q Consensus 611 y~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~-~~~kl~DFG~a~~ 689 (766)
|+++|+|.+++.+... ..+++..+..++.|++.|++|||+. +|+||||||+||+++++ +.+|++|||.++.
T Consensus 80 ~~~~~~L~~~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~ 151 (256)
T cd08220 80 YAPGGTLAEYIQKRCN-----SLLDEDTILHFFVQILLALHHVHTK---LILHRDLKTQNILLDKHKMVVKIGDFGISKI 151 (256)
T ss_pred cCCCCCHHHHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEccCCCcee
Confidence 9999999999976432 3489999999999999999999997 99999999999999865 5689999999986
Q ss_pred cCCC--CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCCc
Q 004248 690 QGGD--AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSSR 750 (766)
Q Consensus 690 ~~~~--~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~~ 750 (766)
.... .....++..|+|||...... .+.++|||||||++|||++|+.||...+
T Consensus 152 ~~~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~Dv~slG~~l~~l~~~~~~~~~~~ 205 (256)
T cd08220 152 LSSKSKAYTVVGTPCYISPELCEGKP---------YNQKSDIWALGCVLYELASLKRAFEAAN 205 (256)
T ss_pred cCCCccccccccCCcccCchhccCCC---------CCcccchHHHHHHHHHHHhCCCCcccCc
Confidence 6432 22345678899999876433 4789999999999999999999996543
No 303
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=99.97 E-value=8e-31 Score=279.09 Aligned_cols=197 Identities=18% Similarity=0.267 Sum_probs=165.6
Q ss_pred CCCCccceeecCCcceEEEEEEc-CCcEEEEEEeeccccC---HHHHHHHHHHHhhcCCCCcccceeEEEecC-CcEEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGILE-GGIPVVIKRIDLQSVK---TEAYLLELDFFSKVSHARLVPLLGHCMERE-NEKFLV 608 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~---~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~~~lV 608 (766)
++|+..+.||+|+||.||+|... +++.||+|.++..... ...+.+|++++++++||||+++++++...+ +..|+|
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv 84 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV 84 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence 46888899999999999999964 6889999999754322 346788999999999999999999876532 679999
Q ss_pred EeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhh
Q 004248 609 YKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVC 688 (766)
Q Consensus 609 ~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~ 688 (766)
|||++ ++|.+++..... .+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++
T Consensus 85 ~e~~~-~~L~~~~~~~~~------~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~~l~d~g~~~ 154 (293)
T cd07843 85 MEYVE-HDLKSLMETMKQ------PFLQSEVKCLMLQLLSGVAHLHDN---WILHRDLKTSNLLLNNRGILKICDFGLAR 154 (293)
T ss_pred ehhcC-cCHHHHHHhccC------CCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCcEEEeecCcee
Confidence 99998 599998875432 489999999999999999999997 99999999999999999999999999988
Q ss_pred hcCCC---CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 689 AQGGD---AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 689 ~~~~~---~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
..... .....++..|+|||....... .+.++||||+||++|||++|+.||..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~--------~~~~~Di~slG~~l~~l~~g~~~f~~ 209 (293)
T cd07843 155 EYGSPLKPYTQLVVTLWYRAPELLLGAKE--------YSTAIDMWSVGCIFAELLTKKPLFPG 209 (293)
T ss_pred eccCCccccccccccccccCchhhcCCcc--------ccchhhHHHHHHHHHHHHhCCCCCCC
Confidence 65332 233456788999998754322 46899999999999999999999853
No 304
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=99.97 E-value=9.1e-31 Score=277.55 Aligned_cols=196 Identities=16% Similarity=0.173 Sum_probs=165.3
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeecccc---CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV---KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVY 609 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~ 609 (766)
++|+..+.||+|+||.||+|.. .+++.||||+++.... ..+.+.+|++++++++|+||+++++++.. ++..++||
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~iv~ 79 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRR-KGRLYLVF 79 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEE-CCEEEEEE
Confidence 3688899999999999999995 4688999999865322 25679999999999999999999998866 56899999
Q ss_pred eeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhh
Q 004248 610 KYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCA 689 (766)
Q Consensus 610 Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~ 689 (766)
||++++.+..+..+.. .+++.++..++.||+.||+|||+. +|+||||||+||++++++.+||+|||++..
T Consensus 80 e~~~~~~l~~~~~~~~-------~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~ 149 (288)
T cd07833 80 EYVERTLLELLEASPG-------GLPPDAVRSYIWQLLQAIAYCHSH---NIIHRDIKPENILVSESGVLKLCDFGFARA 149 (288)
T ss_pred ecCCCCHHHHHHhcCC-------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEEeeecccc
Confidence 9999877766554332 389999999999999999999997 999999999999999999999999999876
Q ss_pred cCCC----CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 690 QGGD----AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 690 ~~~~----~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
.... .....++..|+|||....... ++.++|||||||++|||++|+.||..
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~PE~~~~~~~--------~~~~~Dv~slG~~l~~l~~g~~~~~~ 204 (288)
T cd07833 150 LRARPASPLTDYVATRWYRAPELLVGDTN--------YGKPVDVWAIGCIMAELLDGEPLFPG 204 (288)
T ss_pred cCCCccccccCcccccCCcCCchhcCCCC--------cCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 5332 233456888999998765421 57899999999999999999998853
No 305
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=99.97 E-value=1.2e-30 Score=276.09 Aligned_cols=198 Identities=21% Similarity=0.300 Sum_probs=165.9
Q ss_pred CCCccceeecCCcceEEEEEE-cCCcEEEEEEeecccc--CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEee
Q 004248 535 DFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV--KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKY 611 (766)
Q Consensus 535 ~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey 611 (766)
+|+..+.||+|++|.||+|+. .+|+.||||+++.... ..+.+.+|++++++++||||+++++++.. .+..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~ 79 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHT-ENKLMLVFEY 79 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEee-CCcEEEEEec
Confidence 478889999999999999995 5689999999875433 24678899999999999999999998776 5678999999
Q ss_pred CCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcC
Q 004248 612 MPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQG 691 (766)
Q Consensus 612 ~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~ 691 (766)
+++ +|.+++..... ...+++.++..++.|++.||+|||+. +|+||||||+||++++++.+|++|||+++...
T Consensus 80 ~~~-~l~~~~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~ 151 (284)
T cd07836 80 MDK-DLKKYMDTHGV----RGALDPNTVKSFTYQLLKGIAFCHEN---RVLHRDLKPQNLLINKRGELKLADFGLARAFG 151 (284)
T ss_pred CCc-cHHHHHHhcCC----CCCcCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCcEEEeecchhhhhc
Confidence 984 89998865432 13489999999999999999999987 99999999999999999999999999997653
Q ss_pred CC---CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 692 GD---AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 692 ~~---~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
.. .....++..|++||....... ++.++|||||||++|||++|+.||...
T Consensus 152 ~~~~~~~~~~~~~~y~~PE~~~~~~~--------~~~~~Dv~slG~~l~~l~~g~~~~~~~ 204 (284)
T cd07836 152 IPVNTFSNEVVTLWYRAPDVLLGSRT--------YSTSIDIWSVGCIMAEMITGRPLFPGT 204 (284)
T ss_pred CCccccccccccccccChHHhcCCCC--------CCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 22 123456788999997654321 468999999999999999999998644
No 306
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=99.97 E-value=8.1e-31 Score=284.89 Aligned_cols=196 Identities=19% Similarity=0.263 Sum_probs=162.8
Q ss_pred hCCCCccceeecCCcceEEEEE-EcCCcEEEEEEeecccc--CHHHHHHHHHHHhhcCCCCcccceeEEEecC----CcE
Q 004248 533 TGDFSDANLIKNGHSGDLFRGI-LEGGIPVVIKRIDLQSV--KTEAYLLELDFFSKVSHARLVPLLGHCMERE----NEK 605 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~-~~~g~~vavK~l~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~----~~~ 605 (766)
+++|+..+.||+|+||.||+|+ ..+|+.||||++..... ...++.+|+.++++++||||+++++++.... ...
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 83 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV 83 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence 4679999999999999999998 46789999999864322 2457889999999999999999999765422 357
Q ss_pred EEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccch
Q 004248 606 FLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLS 685 (766)
Q Consensus 606 ~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG 685 (766)
|+|+||+++ +|.+++..+ .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 84 ~lv~e~~~~-~l~~~~~~~--------~l~~~~~~~i~~ql~~aL~~LH~~---~ivH~dlkp~Nill~~~~~~kl~dfg 151 (336)
T cd07849 84 YIVQELMET-DLYKLIKTQ--------HLSNDHIQYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTNCDLKICDFG 151 (336)
T ss_pred EEEehhccc-CHHHHHhcC--------CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEECccc
Confidence 999999974 888877532 389999999999999999999998 99999999999999999999999999
Q ss_pred hhhhcCCC------CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 686 EVCAQGGD------AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 686 ~a~~~~~~------~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
+++..... .....++..|+|||.+..... ++.++||||+||++|||+||+.||..
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~--------~~~~~DvwslGvil~el~~G~~~f~~ 212 (336)
T cd07849 152 LARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKG--------YTKAIDIWSVGCILAEMLSNRPLFPG 212 (336)
T ss_pred ceeeccccccccCCcCCcCcCCCccChHHhhCCCC--------CCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 98765321 122457888999997643221 47899999999999999999999954
No 307
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=99.97 E-value=2e-30 Score=271.51 Aligned_cols=200 Identities=21% Similarity=0.250 Sum_probs=168.9
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeecccc--CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEe
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV--KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYK 610 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~E 610 (766)
++|+..+.||+|+||.||+|.. .++..||+|++..... ..+.+.+|+++++.++|+||+++++.+.. ++..++|||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~iv~e 79 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVV-GDELWLVMP 79 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEee-CCEEEEEEe
Confidence 4788899999999999999994 5688999999865433 35679999999999999999999997765 568999999
Q ss_pred eCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhc
Q 004248 611 YMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQ 690 (766)
Q Consensus 611 y~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~ 690 (766)
|+++++|.++++.... ...+++.....++.|++.||+|||+. +|+||||||+||++++++.+||+|||++...
T Consensus 80 ~~~~~~l~~~~~~~~~----~~~~~~~~~~~~~~ql~~al~~lh~~---~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~ 152 (267)
T cd06610 80 YLSGGSLLDIMKSSYP----RGGLDEAIIATVLKEVLKGLEYLHSN---GQIHRDIKAGNILLGEDGSVKIADFGVSASL 152 (267)
T ss_pred ccCCCcHHHHHHHhcc----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccchHHHh
Confidence 9999999999975321 12489999999999999999999987 9999999999999999999999999998765
Q ss_pred CCCC-------ccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 691 GGDA-------HQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 691 ~~~~-------~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
.... ....++..|++||....... .+.++|||||||++|||++|+.||...
T Consensus 153 ~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~--------~~~~~Dv~slG~i~~~l~~g~~p~~~~ 210 (267)
T cd06610 153 ADGGDRTRKVRKTFVGTPCWMAPEVMEQVHG--------YDFKADIWSFGITAIELATGAAPYSKY 210 (267)
T ss_pred ccCccccccccccccCChhhcChHHHccccC--------cCcccchHhHhHHHHHHHhCCCCcccc
Confidence 3221 22357788999998755421 578999999999999999999999643
No 308
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=99.97 E-value=1.3e-30 Score=275.14 Aligned_cols=191 Identities=21% Similarity=0.218 Sum_probs=161.0
Q ss_pred eecCCcceEEEEE-EcCCcEEEEEEeecccc----CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEeeCCCCC
Q 004248 542 IKNGHSGDLFRGI-LEGGIPVVIKRIDLQSV----KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGD 616 (766)
Q Consensus 542 ig~G~~g~Vy~~~-~~~g~~vavK~l~~~~~----~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey~~~Gs 616 (766)
||+|+||+||+|. ..+|+.||+|.+..... ..+.+.+|++++++++||||+++++++.. .+..|+||||+++|+
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~lv~e~~~~~~ 79 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFET-KDDLCLVMTLMNGGD 79 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEec-CCeEEEEEecCCCCc
Confidence 6899999999998 45689999999865432 24467889999999999999999987654 568999999999999
Q ss_pred hhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcCC--CC
Q 004248 617 LSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGG--DA 694 (766)
Q Consensus 617 L~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~~--~~ 694 (766)
|.+++.+... ..+++.++..++.|++.||.|||+. +++||||||+||++++++.+||+|||.+..... ..
T Consensus 80 L~~~l~~~~~-----~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~ 151 (277)
T cd05577 80 LKYHIYNVGE-----PGFPEARAIFYAAQIICGLEHLHQR---RIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKKI 151 (277)
T ss_pred HHHHHHHcCc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEccCcchhhhccCCcc
Confidence 9999976542 3489999999999999999999997 999999999999999999999999999876532 22
Q ss_pred ccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCCc
Q 004248 695 HQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSSR 750 (766)
Q Consensus 695 ~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~~ 750 (766)
....++..|++||...... ++.++||||+||++|||++|+.||....
T Consensus 152 ~~~~~~~~y~~PE~~~~~~---------~~~~~Di~slG~il~~l~~g~~p~~~~~ 198 (277)
T cd05577 152 KGRAGTPGYMAPEVLQGEV---------YDFSVDWFALGCTLYEMIAGRSPFRQRK 198 (277)
T ss_pred ccccCCCCcCCHHHhcCCC---------CCchhhhHHHHHHHHHHhhCCCCCCCCc
Confidence 2345677899999876544 3679999999999999999999995443
No 309
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.97 E-value=1.5e-30 Score=276.48 Aligned_cols=195 Identities=18% Similarity=0.168 Sum_probs=163.6
Q ss_pred CCCccceeecCCcceEEEEEE----cCCcEEEEEEeecccc-----CHHHHHHHHHHHhhc-CCCCcccceeEEEecCCc
Q 004248 535 DFSDANLIKNGHSGDLFRGIL----EGGIPVVIKRIDLQSV-----KTEAYLLELDFFSKV-SHARLVPLLGHCMERENE 604 (766)
Q Consensus 535 ~~~~~~~ig~G~~g~Vy~~~~----~~g~~vavK~l~~~~~-----~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~ 604 (766)
+|+..+.||+|+||.||+|.. .+|+.||+|++..... ..+++.+|+++++++ +|+||+++++.+.. +..
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~-~~~ 79 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQT-DTK 79 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeec-CCe
Confidence 467789999999999999985 4689999999865321 246788999999999 59999999986544 567
Q ss_pred EEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccc
Q 004248 605 KFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684 (766)
Q Consensus 605 ~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DF 684 (766)
.|+||||+++|+|.+++.... .+++.+...++.|+++||+|||+. +++||||||+||++++++.+||+||
T Consensus 80 ~~lv~e~~~~~~L~~~l~~~~-------~l~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~df 149 (290)
T cd05613 80 LHLILDYINGGELFTHLSQRE-------RFKEQEVQIYSGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDF 149 (290)
T ss_pred EEEEEecCCCCcHHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEECCCCCEEEeeC
Confidence 899999999999999997543 378899999999999999999997 9999999999999999999999999
Q ss_pred hhhhhcCCC----CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCC
Q 004248 685 SEVCAQGGD----AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNL 747 (766)
Q Consensus 685 G~a~~~~~~----~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~ 747 (766)
|+++..... .....++..|+|||.......+ .+.++|||||||++|||+||+.||.
T Consensus 150 g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-------~~~~~Dv~slG~~l~~ll~g~~p~~ 209 (290)
T cd05613 150 GLSKEFHEDEVERAYSFCGTIEYMAPDIVRGGDGG-------HDKAVDWWSMGVLMYELLTGASPFT 209 (290)
T ss_pred ccceecccccccccccccCCcccCChhhccCCCCC-------CCccccHHHHHHHHHHHhcCCCCCC
Confidence 998765321 1234578899999987543222 4678999999999999999999985
No 310
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=99.97 E-value=1.6e-30 Score=273.31 Aligned_cols=196 Identities=22% Similarity=0.342 Sum_probs=161.5
Q ss_pred CCCCccceeecCCcceEEEEEEcC----CcEEEEEEeecccc--CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGILEG----GIPVVIKRIDLQSV--KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFL 607 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~~~----g~~vavK~l~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~l 607 (766)
++|...+.||+|+||.||+|...+ ...||||....... ..+.+.+|+.++++++||||+++++++.. +..++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~--~~~~l 83 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE--NPVWI 83 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC--CCcEE
Confidence 357778999999999999998532 35799998865432 25679999999999999999999997754 46899
Q ss_pred EEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhh
Q 004248 608 VYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEV 687 (766)
Q Consensus 608 V~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a 687 (766)
||||+++|+|.+++.+.. ..++|.++..++.|++.||+|||+. +++||||||+||+++.++.+|++|||++
T Consensus 84 v~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~~~l~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~ 154 (270)
T cd05056 84 VMELAPLGELRSYLQVNK------YSLDLASLILYSYQLSTALAYLESK---RFVHRDIAARNVLVSSPDCVKLGDFGLS 154 (270)
T ss_pred EEEcCCCCcHHHHHHhCC------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccChheEEEecCCCeEEccCcee
Confidence 999999999999997543 2489999999999999999999987 9999999999999999999999999998
Q ss_pred hhcCCCC----ccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCCC
Q 004248 688 CAQGGDA----HQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLSS 749 (766)
Q Consensus 688 ~~~~~~~----~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~~ 749 (766)
+...... ....++..|+|||...... ++.++|||||||++|||++ |+.||...
T Consensus 155 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~Di~slG~il~el~~~g~~pf~~~ 212 (270)
T cd05056 155 RYLEDESYYKASKGKLPIKWMAPESINFRR---------FTSASDVWMFGVCMWEILMLGVKPFQGV 212 (270)
T ss_pred eecccccceecCCCCccccccChhhhccCC---------CCchhhhHHHHHHHHHHHHcCCCCCCCC
Confidence 7653221 1122335799999765433 4789999999999999996 99999544
No 311
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.97 E-value=1.7e-30 Score=282.20 Aligned_cols=203 Identities=14% Similarity=0.247 Sum_probs=163.6
Q ss_pred CCCCccceeecCCcceEEEEEEc--------CCcEEEEEEeeccccC--HHHHHHHHHHHhhc-CCCCcccceeEEEecC
Q 004248 534 GDFSDANLIKNGHSGDLFRGILE--------GGIPVVIKRIDLQSVK--TEAYLLELDFFSKV-SHARLVPLLGHCMERE 602 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~~--------~g~~vavK~l~~~~~~--~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~ 602 (766)
.+|...+.||+|+||.||+|... .+..||+|.++..... .+++.+|+++++++ +||||++++++|.. +
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~-~ 90 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ-D 90 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEcc-C
Confidence 35788899999999999999732 1247999988643322 46799999999999 79999999998865 5
Q ss_pred CcEEEEEeeCCCCChhhhhhccCCCC---------CcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeee
Q 004248 603 NEKFLVYKYMPNGDLSSSLYRKTNTE---------DDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILL 673 (766)
Q Consensus 603 ~~~~lV~Ey~~~GsL~~~l~~~~~~~---------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl 673 (766)
+..++||||+++|+|.+++.+..... .....++|.++..++.|++.||+|||+. +|+||||||+||++
T Consensus 91 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~Nill 167 (334)
T cd05100 91 GPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQ---KCIHRDLAARNVLV 167 (334)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEE
Confidence 67999999999999999997543110 1123589999999999999999999997 99999999999999
Q ss_pred CCCCcEEeccchhhhhcCCC-----CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCC
Q 004248 674 DDKFEVRLGSLSEVCAQGGD-----AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNL 747 (766)
Q Consensus 674 ~~~~~~kl~DFG~a~~~~~~-----~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~ 747 (766)
++++.+||+|||+++..... .....++..|+|||...... ++.++|||||||++|||++ |+.||.
T Consensus 168 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~Di~slG~il~el~~~g~~p~~ 238 (334)
T cd05100 168 TEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRV---------YTHQSDVWSFGVLLWEIFTLGGSPYP 238 (334)
T ss_pred cCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCC---------cCchhhhHHHHHHHHHHHhcCCCCCC
Confidence 99999999999999765321 11122345799999875543 4679999999999999998 888885
Q ss_pred CC
Q 004248 748 SS 749 (766)
Q Consensus 748 ~~ 749 (766)
..
T Consensus 239 ~~ 240 (334)
T cd05100 239 GI 240 (334)
T ss_pred CC
Confidence 43
No 312
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.97 E-value=1.3e-30 Score=276.67 Aligned_cols=201 Identities=20% Similarity=0.226 Sum_probs=167.6
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeecccc--CHHHHHHHHHHHhhcCCCCcccceeEEEec-CCcEEEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV--KTEAYLLELDFFSKVSHARLVPLLGHCMER-ENEKFLVY 609 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-~~~~~lV~ 609 (766)
++|+..+.||.|++|.||+|.. .+++.||+|.+..... ..+++.+|++++++++||||++++++|... .+..++||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 80 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM 80 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence 4678889999999999999996 5689999999875433 256799999999999999999999987643 34689999
Q ss_pred eeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhh
Q 004248 610 KYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCA 689 (766)
Q Consensus 610 Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~ 689 (766)
||+++|+|.+++..... ....+++.....++.|++.||+|||+. +++||||+|+||++++++.+||+|||++..
T Consensus 81 e~~~~~~L~~~l~~~~~---~~~~l~~~~~~~i~~~i~~~L~~lH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~ 154 (287)
T cd06621 81 EYCEGGSLDSIYKKVKK---RGGRIGEKVLGKIAESVLKGLSYLHSR---KIIHRDIKPSNILLTRKGQVKLCDFGVSGE 154 (287)
T ss_pred EecCCCCHHHHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecCCeEEEeecccccc
Confidence 99999999998764221 123488999999999999999999997 999999999999999999999999999875
Q ss_pred cCCC-CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 690 QGGD-AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 690 ~~~~-~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
.... .....++..|++||...... ++.++||||+||++|||+||+.||...
T Consensus 155 ~~~~~~~~~~~~~~y~~pE~~~~~~---------~~~~~Dv~slG~il~~l~~g~~p~~~~ 206 (287)
T cd06621 155 LVNSLAGTFTGTSFYMAPERIQGKP---------YSITSDVWSLGLTLLEVAQNRFPFPPE 206 (287)
T ss_pred ccccccccccCCccccCHHHhcCCC---------CCchhhHHHHHHHHHHHHhCCCCCCcc
Confidence 4322 22345677899999875443 478999999999999999999999644
No 313
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=99.97 E-value=8.3e-31 Score=273.44 Aligned_cols=196 Identities=18% Similarity=0.191 Sum_probs=167.7
Q ss_pred CCCccceeecCCcceEEEEEEc-CCcEEEEEEeecccc----CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEE
Q 004248 535 DFSDANLIKNGHSGDLFRGILE-GGIPVVIKRIDLQSV----KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVY 609 (766)
Q Consensus 535 ~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~----~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~ 609 (766)
+|+..++||+|+||.||+|... +++.||+|.+..... ..+.+.+|++++++++||||+++++++.+ ++..++|+
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~ 79 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQD-EENMYLVV 79 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcC-CCeEEEEE
Confidence 4778899999999999999964 689999999975432 24678999999999999999999986654 56899999
Q ss_pred eeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhh
Q 004248 610 KYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCA 689 (766)
Q Consensus 610 Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~ 689 (766)
||+++++|.+++.... .+++.++..++.|+++||.|||+. +++|+||||+||++++++.+||+|||.+..
T Consensus 80 e~~~~~~L~~~l~~~~-------~l~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~l~d~~~~~~ 149 (258)
T cd05578 80 DLLLGGDLRYHLSQKV-------KFSEEQVKFWICEIVLALEYLHSK---GIIHRDIKPDNILLDEQGHVHITDFNIATK 149 (258)
T ss_pred eCCCCCCHHHHHHhcC-------CcCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEEcCCCCEEEeecccccc
Confidence 9999999999997542 488999999999999999999987 999999999999999999999999999876
Q ss_pred cCCC--CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCCc
Q 004248 690 QGGD--AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSSR 750 (766)
Q Consensus 690 ~~~~--~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~~ 750 (766)
.... .....++..|++||...... .+.++|||||||++|||++|+.||....
T Consensus 150 ~~~~~~~~~~~~~~~y~~PE~~~~~~---------~~~~~Di~slG~~l~~l~~g~~p~~~~~ 203 (258)
T cd05578 150 VTPDTLTTSTSGTPGYMAPEVLCRQG---------YSVAVDWWSLGVTAYECLRGKRPYRGHS 203 (258)
T ss_pred cCCCccccccCCChhhcCHHHHcccC---------CCCcccchhhHHHHHHHHhCCCCCCCCC
Confidence 5322 23345678899999875443 4689999999999999999999996544
No 314
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=99.97 E-value=9e-31 Score=274.07 Aligned_cols=197 Identities=21% Similarity=0.258 Sum_probs=168.4
Q ss_pred CCCCccceeecCCcceEEEEEEc-CCcEEEEEEeecccc--CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEe
Q 004248 534 GDFSDANLIKNGHSGDLFRGILE-GGIPVVIKRIDLQSV--KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYK 610 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~E 610 (766)
++|+..+.||+|+||.||+|... +++.||+|++..... ..+++.+|++++++++||||+++++++.. ++..++|+|
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~~lv~e 79 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYN-NGDISICME 79 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeec-CCEEEEEEE
Confidence 46778899999999999999954 689999999876533 25679999999999999999999998776 578999999
Q ss_pred eCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhcc-CCCCCeEecCCCCCCeeeCCCCcEEeccchhhhh
Q 004248 611 YMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHH-ECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCA 689 (766)
Q Consensus 611 y~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~ 689 (766)
|+++++|.+++.... ..+++.....++.|++.|++|||+ . +++||||||+||++++++.+||+|||.+..
T Consensus 80 ~~~~~~L~~~~~~~~------~~~~~~~~~~~~~~l~~~l~~lH~~~---~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~ 150 (265)
T cd06605 80 YMDGGSLDKILKEVQ------GRIPERILGKIAVAVLKGLTYLHEKH---KIIHRDVKPSNILVNSRGQIKLCDFGVSGQ 150 (265)
T ss_pred ecCCCcHHHHHHHcc------CCCCHHHHHHHHHHHHHHHHHHcCCC---CeecCCCCHHHEEECCCCCEEEeecccchh
Confidence 999999999997542 248899999999999999999998 6 999999999999999999999999999876
Q ss_pred cCCC-CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 690 QGGD-AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 690 ~~~~-~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
.... .....++..|++||...... ++.++|||||||++|||++|+.||...
T Consensus 151 ~~~~~~~~~~~~~~y~~PE~~~~~~---------~~~~~Dv~slG~~l~~l~~g~~p~~~~ 202 (265)
T cd06605 151 LVNSLAKTFVGTSSYMAPERIQGND---------YSVKSDIWSLGLSLIELATGRFPYPPE 202 (265)
T ss_pred hHHHHhhcccCChhccCHHHHcCCC---------CCchhhHHHHHHHHHHHHhCCCCCCcc
Confidence 5221 12255778899999875543 578999999999999999999999654
No 315
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=99.97 E-value=1.5e-30 Score=274.22 Aligned_cols=202 Identities=21% Similarity=0.331 Sum_probs=165.5
Q ss_pred CCCCccceeecCCcceEEEEEEc------CCcEEEEEEeeccccC--HHHHHHHHHHHhhcCCCCcccceeEEEecCCcE
Q 004248 534 GDFSDANLIKNGHSGDLFRGILE------GGIPVVIKRIDLQSVK--TEAYLLELDFFSKVSHARLVPLLGHCMERENEK 605 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~--~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 605 (766)
++|+..+.||+|+||.||+|+.. +.+.||+|.+...... .+++.+|++++++++||||+++++++.+ .+..
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~ 83 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCRE-AEPH 83 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECC-CCcc
Confidence 46888899999999999999853 3468999988654433 4679999999999999999999997765 5678
Q ss_pred EEEEeeCCCCChhhhhhccCCCC--CcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEecc
Q 004248 606 FLVYKYMPNGDLSSSLYRKTNTE--DDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGS 683 (766)
Q Consensus 606 ~lV~Ey~~~GsL~~~l~~~~~~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~D 683 (766)
++||||+++|+|.+++....... .....++|.++..++.|++.||+|||+. +|+||||||+||++++++.+|++|
T Consensus 84 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~~ 160 (275)
T cd05046 84 YMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNA---RFVHRDLAARNCLVSSQREVKVSL 160 (275)
T ss_pred eEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhc---CcccCcCccceEEEeCCCcEEEcc
Confidence 99999999999999997544211 1112589999999999999999999987 899999999999999999999999
Q ss_pred chhhhhcCC----CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCC
Q 004248 684 LSEVCAQGG----DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLS 748 (766)
Q Consensus 684 FG~a~~~~~----~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~ 748 (766)
||+++.... ......++..|++||...... .+.++|||||||++|||++ |..||..
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~---------~~~~~Di~slG~~l~~l~~~~~~p~~~ 221 (275)
T cd05046 161 LSLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDD---------FSTKSDVWSFGVLMWEVFTQGELPFYG 221 (275)
T ss_pred cccccccCcccccccCCceeEEeecChhhhccCC---------CCchhhHHHHHHHHHHHHhCCCCCccc
Confidence 999865421 122334567799999875443 3678999999999999999 7888843
No 316
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=99.97 E-value=2.3e-30 Score=270.50 Aligned_cols=196 Identities=21% Similarity=0.270 Sum_probs=169.8
Q ss_pred CCCCccceeecCCcceEEEEEEc-CCcEEEEEEeecccc--CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEe
Q 004248 534 GDFSDANLIKNGHSGDLFRGILE-GGIPVVIKRIDLQSV--KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYK 610 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~E 610 (766)
++|+..+.||+|++|.||+|+.. +++.||||++..... ..+.+.+|++.+.+++||||+++++++.. .+..++|||
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~lv~e 79 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYK-EGEISIVLE 79 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEcc-CCeEEEEEE
Confidence 36888899999999999999965 599999999876543 25689999999999999999999998765 568999999
Q ss_pred eCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhcc-CCCCCeEecCCCCCCeeeCCCCcEEeccchhhhh
Q 004248 611 YMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHH-ECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCA 689 (766)
Q Consensus 611 y~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~ 689 (766)
|+++++|.+++.... .+++..+..++.|+++|++|||+ . +++||||||+||+++.++.+||+|||.+..
T Consensus 80 ~~~~~~L~~~l~~~~-------~l~~~~~~~~~~~l~~~l~~lh~~~---~~~H~~l~~~ni~~~~~~~~~l~df~~~~~ 149 (264)
T cd06623 80 YMDGGSLADLLKKVG-------KIPEPVLAYIARQILKGLDYLHTKR---HIIHRDIKPSNLLINSKGEVKIADFGISKV 149 (264)
T ss_pred ecCCCcHHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHhccC---CCccCCCCHHHEEECCCCCEEEccCcccee
Confidence 999999999997543 38999999999999999999998 7 999999999999999999999999999876
Q ss_pred cCCCC---ccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 690 QGGDA---HQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 690 ~~~~~---~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
..... ....++..|+|||...... ++.++||||||+++|||+||+.||...
T Consensus 150 ~~~~~~~~~~~~~~~~y~~pE~~~~~~---------~~~~~Dv~slG~il~~l~tg~~p~~~~ 203 (264)
T cd06623 150 LENTLDQCNTFVGTVTYMSPERIQGES---------YSYAADIWSLGLTLLECALGKFPFLPP 203 (264)
T ss_pred cccCCCcccceeecccccCHhhhCCCC---------CCchhhHHHHHHHHHHHHhCCCCCccc
Confidence 53221 2345778899999876543 578999999999999999999999654
No 317
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=99.97 E-value=1.6e-30 Score=272.57 Aligned_cols=195 Identities=16% Similarity=0.261 Sum_probs=164.5
Q ss_pred CCCccceeecCCcceEEEEE-EcCCcEEEEEEeecccc-------CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEE
Q 004248 535 DFSDANLIKNGHSGDLFRGI-LEGGIPVVIKRIDLQSV-------KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKF 606 (766)
Q Consensus 535 ~~~~~~~ig~G~~g~Vy~~~-~~~g~~vavK~l~~~~~-------~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~ 606 (766)
+|+..+.||+|+||.||+|. ..+++.||+|.+..... ..+++.+|++++++++||||+++++++.+ .+..+
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~ 79 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCE-DSHFN 79 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceecc-CCeEE
Confidence 47778999999999999998 46789999999864331 13578999999999999999999998765 56799
Q ss_pred EEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCC-cEEeccch
Q 004248 607 LVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKF-EVRLGSLS 685 (766)
Q Consensus 607 lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~-~~kl~DFG 685 (766)
+||||+++++|.+++.+.+ .+++..+..++.|++.||+|||+. +++||||||+||+++.++ .+||+|||
T Consensus 80 ~v~e~~~~~~L~~~l~~~~-------~~~~~~~~~~~~ql~~al~~LH~~---~i~H~~i~~~nil~~~~~~~~~l~dfg 149 (268)
T cd06630 80 LFVEWMAGGSVSHLLSKYG-------AFKEAVIINYTEQLLRGLSYLHEN---QIIHRDVKGANLLIDSTGQRLRIADFG 149 (268)
T ss_pred EEEeccCCCcHHHHHHHhC-------CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEcccc
Confidence 9999999999999997543 388999999999999999999998 999999999999998776 59999999
Q ss_pred hhhhcCCC-------CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 686 EVCAQGGD-------AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 686 ~a~~~~~~-------~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
.+...... .....++..|+|||...... ++.++||||+||++|||++|+.||...
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~---------~~~~~Dv~slG~~l~~l~~g~~p~~~~ 211 (268)
T cd06630 150 AAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQ---------YGRSCDVWSVGCVIIEMATAKPPWNAE 211 (268)
T ss_pred cccccccccccCCccccccccccceeCHhHhccCC---------CCcccchHHHHHHHHHHHhCCCCCCCC
Confidence 98765321 11235677899999875433 468999999999999999999999543
No 318
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=99.97 E-value=2.6e-30 Score=270.27 Aligned_cols=198 Identities=20% Similarity=0.264 Sum_probs=167.5
Q ss_pred CCCccceeecCCcceEEEEEE-cCCcEEEEEEeecccc---CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEe
Q 004248 535 DFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV---KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYK 610 (766)
Q Consensus 535 ~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~E 610 (766)
+|+..+.||+|+||.||+|.. .+++.||+|.++.... ..+.+.+|++++++++|+||+++++++.. .+..++|+|
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~-~~~~~lv~e 79 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVH-REKVYIFME 79 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEec-CCEEEEEEe
Confidence 477789999999999999985 5789999999976544 25678999999999999999999997765 568999999
Q ss_pred eCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhc
Q 004248 611 YMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQ 690 (766)
Q Consensus 611 y~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~ 690 (766)
|+++++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||++...
T Consensus 80 ~~~~~~L~~~~~~~~-------~~~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~ 149 (264)
T cd06626 80 YCSGGTLEELLEHGR-------ILDEHVIRVYTLQLLEGLAYLHSH---GIVHRDIKPANIFLDHNGVIKLGDFGCAVKL 149 (264)
T ss_pred cCCCCcHHHHHhhcC-------CCChHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccccccccc
Confidence 999999999997543 378999999999999999999997 9999999999999999999999999998765
Q ss_pred CCCCc-------cceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 691 GGDAH-------QSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 691 ~~~~~-------~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
..... ...++..|++||........ ..+.++|||||||+++||++|+.||...
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~------~~~~~~Dv~s~G~il~~l~~g~~pf~~~ 209 (264)
T cd06626 150 KNNTTTMGEEVQSLAGTPAYMAPEVITGGKGK------GHGRAADIWSLGCVVLEMATGKRPWSEL 209 (264)
T ss_pred CCCCCcccccccCCcCCcCccChhhccCCCCC------CCCcccchHHHHHHHHHHHhCCCCccCC
Confidence 32211 23467789999987654311 1478999999999999999999999644
No 319
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.97 E-value=1.2e-30 Score=282.35 Aligned_cols=202 Identities=18% Similarity=0.211 Sum_probs=169.7
Q ss_pred HHHHHhCCCCccceeecCCcceEEEEE-EcCCcEEEEEEeecccc---CHHHHHHHHHHHhhcCCCCcccceeEEEecCC
Q 004248 528 QLLAATGDFSDANLIKNGHSGDLFRGI-LEGGIPVVIKRIDLQSV---KTEAYLLELDFFSKVSHARLVPLLGHCMEREN 603 (766)
Q Consensus 528 ~l~~~~~~~~~~~~ig~G~~g~Vy~~~-~~~g~~vavK~l~~~~~---~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~ 603 (766)
++...+++|+..+.||+|+||.||+|. ..+++.||||++..... ..+.+.+|++++++++||||+++++++....+
T Consensus 4 ~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~ 83 (328)
T cd07856 4 TVFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLE 83 (328)
T ss_pred ceeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCC
Confidence 344577889999999999999999998 45799999998854321 24678899999999999999999998765456
Q ss_pred cEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEecc
Q 004248 604 EKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGS 683 (766)
Q Consensus 604 ~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~D 683 (766)
..|+|+||+. ++|.+++... .+++.....++.|++.||+|||+. +|+||||||+||++++++.+||+|
T Consensus 84 ~~~lv~e~~~-~~L~~~~~~~--------~~~~~~~~~~~~ql~~aL~~LH~~---~iiH~dl~p~Nili~~~~~~~l~d 151 (328)
T cd07856 84 DIYFVTELLG-TDLHRLLTSR--------PLEKQFIQYFLYQILRGLKYVHSA---GVVHRDLKPSNILINENCDLKICD 151 (328)
T ss_pred cEEEEeehhc-cCHHHHHhcC--------CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEeECCCCCEEeCc
Confidence 7899999994 6898888532 378888889999999999999997 999999999999999999999999
Q ss_pred chhhhhcCCCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 684 LSEVCAQGGDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 684 FG~a~~~~~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
||.++..........++..|+|||.+..+.. ++.++|||||||++|||+||+.||...
T Consensus 152 fg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~--------~~~~~Dv~slG~il~el~tg~~~f~~~ 209 (328)
T cd07856 152 FGLARIQDPQMTGYVSTRYYRAPEIMLTWQK--------YDVEVDIWSAGCIFAEMLEGKPLFPGK 209 (328)
T ss_pred cccccccCCCcCCCcccccccCceeeeccCC--------cCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 9999866544455567888999998644221 478999999999999999999998543
No 320
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=99.97 E-value=9.3e-31 Score=274.72 Aligned_cols=196 Identities=22% Similarity=0.356 Sum_probs=159.3
Q ss_pred ceeecCCcceEEEEEEcC-------CcEEEEEEeecccc--CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEe
Q 004248 540 NLIKNGHSGDLFRGILEG-------GIPVVIKRIDLQSV--KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYK 610 (766)
Q Consensus 540 ~~ig~G~~g~Vy~~~~~~-------g~~vavK~l~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~E 610 (766)
+.||+|+||.||+|+..+ ++.||||.+..... ...+|.+|++++++++||||++++++|.. .+..++|||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~~v~e 79 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLL-NEPQYIIME 79 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecC-CCCeEEEEe
Confidence 468999999999998532 36899998865432 25679999999999999999999998865 467999999
Q ss_pred eCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCC-----cEEeccch
Q 004248 611 YMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKF-----EVRLGSLS 685 (766)
Q Consensus 611 y~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~-----~~kl~DFG 685 (766)
|+++|+|.++++...........++|.++..++.|++.||+|||+. +++||||||+||+++.+. .+|++|||
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg 156 (269)
T cd05044 80 LMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQM---HFIHRDLAARNCLVSEKGYDADRVVKIGDFG 156 (269)
T ss_pred ccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhC---CcccCCCChheEEEecCCCCCCcceEECCcc
Confidence 9999999999975432111223489999999999999999999987 899999999999999877 89999999
Q ss_pred hhhhcCCC-----CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCC
Q 004248 686 EVCAQGGD-----AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLS 748 (766)
Q Consensus 686 ~a~~~~~~-----~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~ 748 (766)
+++..... ......+..|+|||....+. ++.++|||||||++|||+| |+.||..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~Dv~slG~il~ellt~g~~p~~~ 216 (269)
T cd05044 157 LARDIYKSDYYRKEGEGLLPVRWMAPESLLDGK---------FTTQSDVWSFGVLMWEILTLGQQPYPA 216 (269)
T ss_pred cccccccccccccCcccCCCccccCHHHHccCC---------cccchhHHHHHHHHHHHHHcCCCCCcc
Confidence 98754211 11223456799999876544 4789999999999999998 9999853
No 321
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=4e-31 Score=280.25 Aligned_cols=201 Identities=17% Similarity=0.187 Sum_probs=170.2
Q ss_pred CCCccceeecCCcceEEEEEEcCCcEEEEEEeeccccC---HHHHHHHHHHHhhcC-CCCcccceeEEEecCCcEEEEEe
Q 004248 535 DFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVK---TEAYLLELDFFSKVS-HARLVPLLGHCMERENEKFLVYK 610 (766)
Q Consensus 535 ~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~---~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~~lV~E 610 (766)
.|++.+.||+||.++||++...+.+.+|+|++...... ...|.+|++.|.+++ |.+||++++|-.. ++.+|+|||
T Consensus 362 ~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~-d~~lYmvmE 440 (677)
T KOG0596|consen 362 EYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVT-DGYLYMVME 440 (677)
T ss_pred hhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeecc-CceEEEEee
Confidence 47888999999999999999988899999988654333 567999999999995 9999999997665 678999999
Q ss_pred eCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhc
Q 004248 611 YMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQ 690 (766)
Q Consensus 611 y~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~ 690 (766)
|-+- ||..+|.++.. ...+| .++.|-.|++.|+.++|.+ +|||.||||.|.|+- +|.+||+|||+|..+
T Consensus 441 ~Gd~-DL~kiL~k~~~-----~~~~~-~lk~ywkqML~aV~~IH~~---gIVHSDLKPANFLlV-kG~LKLIDFGIA~aI 509 (677)
T KOG0596|consen 441 CGDI-DLNKILKKKKS-----IDPDW-FLKFYWKQMLLAVKTIHQH---GIVHSDLKPANFLLV-KGRLKLIDFGIANAI 509 (677)
T ss_pred cccc-cHHHHHHhccC-----CCchH-HHHHHHHHHHHHHHHHHHh---ceeecCCCcccEEEE-eeeEEeeeechhccc
Confidence 9874 99999987654 23456 6788999999999999998 999999999999986 579999999999988
Q ss_pred CCCCc-----cceeeecccCCCCCCCCceeeee--eeeecccccceecchHHHHHHhcCCCCCC
Q 004248 691 GGDAH-----QSRITRLLRLPQSSEQGSSGMVI--YLFIIFTIFHIYFHGNPLFSAIFNNHLNL 747 (766)
Q Consensus 691 ~~~~~-----~~~~t~~y~aPe~~~~~~~g~~~--~~~~~~~~~Dv~s~Gvvl~elltG~~p~~ 747 (766)
..+++ ..+||..||+||.+....++... -.++++.++||||+|||||+|+.||.||.
T Consensus 510 ~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~ 573 (677)
T KOG0596|consen 510 QPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFG 573 (677)
T ss_pred CccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchH
Confidence 65543 46899999999977654443222 35678999999999999999999999994
No 322
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=99.97 E-value=3e-30 Score=267.91 Aligned_cols=191 Identities=21% Similarity=0.395 Sum_probs=160.4
Q ss_pred ceeecCCcceEEEEEEcCCcEEEEEEeeccccC--HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEeeCCCCCh
Q 004248 540 NLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVK--TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDL 617 (766)
Q Consensus 540 ~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~--~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey~~~GsL 617 (766)
++||+|+||.||+|...+++.||+|++...... .+.|.+|++++++++||||+++++++.. .+..++||||+++++|
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~~v~e~~~~~~l 79 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQ-KQPIYIVMELVPGGSL 79 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEec-CCCeEEEEEcCCCCcH
Confidence 479999999999999766999999998654332 4679999999999999999999997765 5689999999999999
Q ss_pred hhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcCCCCc--
Q 004248 618 SSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAH-- 695 (766)
Q Consensus 618 ~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~~~~~-- 695 (766)
.+++.+.. ..+++..+..++.+++.|++|||+. +++||||||+||+++.++.+||+|||+++.......
T Consensus 80 ~~~l~~~~------~~~~~~~~~~~~~~~~~~l~~lH~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~ 150 (251)
T cd05041 80 LTFLRKKK------NRLTVKKLLQMSLDAAAGMEYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTV 150 (251)
T ss_pred HHHHHhcC------CCCCHHHHHHHHHHHHHHHHHHHhC---CEehhhcCcceEEEcCCCcEEEeeccccccccCCccee
Confidence 99997543 2478999999999999999999987 999999999999999999999999999976532111
Q ss_pred ---cceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCCC
Q 004248 696 ---QSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLSS 749 (766)
Q Consensus 696 ---~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~~ 749 (766)
....+..|+|||....+. ++.++|||||||++|||+| |+.||...
T Consensus 151 ~~~~~~~~~~y~~PE~~~~~~---------~~~~~Di~slG~i~~~l~t~~~~p~~~~ 199 (251)
T cd05041 151 SDGLKQIPIKWTAPEALNYGR---------YTSESDVWSYGILLWETFSLGDTPYPGM 199 (251)
T ss_pred ccccCcceeccCChHhhccCC---------CCcchhHHHHHHHHHHHHhccCCCCccC
Confidence 112345699999875443 4789999999999999999 88888543
No 323
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.97 E-value=2.4e-30 Score=273.45 Aligned_cols=195 Identities=17% Similarity=0.193 Sum_probs=160.4
Q ss_pred CCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC--HHHHHHHHHHHhhcC-CCCcccceeEEEecC-CcEEEEEe
Q 004248 536 FSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK--TEAYLLELDFFSKVS-HARLVPLLGHCMERE-NEKFLVYK 610 (766)
Q Consensus 536 ~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~--~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~-~~~~lV~E 610 (766)
|+..+.||+|+||.||+|.. .+++.||+|+++..... .....+|+.++.++. ||||+++++++.+.. +..++|||
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e 80 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE 80 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence 55678999999999999984 57899999998654222 334568999999995 999999999887631 57899999
Q ss_pred eCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhc
Q 004248 611 YMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQ 690 (766)
Q Consensus 611 y~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~ 690 (766)
|++ |+|.+.+..+. ..++|.++..++.|++.||+|||+. +|+||||||+||+++. +.+||+|||+++..
T Consensus 81 ~~~-~~l~~~l~~~~------~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~ 149 (282)
T cd07831 81 LMD-MNLYELIKGRK------RPLPEKRVKSYMYQLLKSLDHMHRN---GIFHRDIKPENILIKD-DILKLADFGSCRGI 149 (282)
T ss_pred cCC-ccHHHHHHhcc------CCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEcC-CCeEEEeccccccc
Confidence 997 58888886533 2489999999999999999999997 9999999999999999 99999999999865
Q ss_pred CCC--CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 691 GGD--AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 691 ~~~--~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
... .....++..|+|||....... ++.++||||+||++|||++|+.||...
T Consensus 150 ~~~~~~~~~~~~~~y~aPE~~~~~~~--------~~~~~Di~slGv~l~el~~~~~p~~~~ 202 (282)
T cd07831 150 YSKPPYTEYISTRWYRAPECLLTDGY--------YGPKMDIWAVGCVFFEILSLFPLFPGT 202 (282)
T ss_pred ccCCCcCCCCCCcccCChhHhhcCCC--------CCcchhHHHHHHHHHHHHcCCcCCCCC
Confidence 322 233456889999997643322 467999999999999999999999543
No 324
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=3e-31 Score=273.06 Aligned_cols=203 Identities=17% Similarity=0.189 Sum_probs=168.5
Q ss_pred CCCccceeecCCcceEEEEE-EcCCcEEEEEEeeccccC--------HHHHHHHHHHHhhcCCCCcccceeEEEecCCcE
Q 004248 535 DFSDANLIKNGHSGDLFRGI-LEGGIPVVIKRIDLQSVK--------TEAYLLELDFFSKVSHARLVPLLGHCMERENEK 605 (766)
Q Consensus 535 ~~~~~~~ig~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~--------~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 605 (766)
+|-..+++|+|+|+.||||. +...+.||||+-...+.. .+...+|.+|-+.+.||.||++|+|+.-+.+..
T Consensus 464 RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtdsF 543 (775)
T KOG1151|consen 464 RYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDSF 543 (775)
T ss_pred HHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccccc
Confidence 35567889999999999999 566889999976432221 235678999999999999999999887656678
Q ss_pred EEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeC---CCCcEEec
Q 004248 606 FLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLD---DKFEVRLG 682 (766)
Q Consensus 606 ~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~---~~~~~kl~ 682 (766)
+-|+|||+|-||+-+|..++. +++.+...|+.||+.||.||.+. .|+|||-||||.|||+- ..|++||+
T Consensus 544 CTVLEYceGNDLDFYLKQhkl-------mSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacGeIKIT 615 (775)
T KOG1151|consen 544 CTVLEYCEGNDLDFYLKQHKL-------MSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACGEIKIT 615 (775)
T ss_pred eeeeeecCCCchhHHHHhhhh-------hhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccceeEee
Confidence 999999999999999987654 89999999999999999999985 68999999999999995 45889999
Q ss_pred cchhhhhcCCCC----------ccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCCc
Q 004248 683 SLSEVCAQGGDA----------HQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSSR 750 (766)
Q Consensus 683 DFG~a~~~~~~~----------~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~~ 750 (766)
|||+++..+++. +...||-||.+||.+..+..- + +++.|+||||.|||+|..+.|++||....
T Consensus 616 DFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkeP-P----KIsnKVDVWSvGVIFyQClYGrKPFGhnq 688 (775)
T KOG1151|consen 616 DFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEP-P----KISNKVDVWSVGVIFYQCLYGRKPFGHNQ 688 (775)
T ss_pred ecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCC-C----ccccceeeEeeehhhhhhhccCCCCCCch
Confidence 999999875332 345789999999987544221 1 27899999999999999999999996443
No 325
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=99.97 E-value=2.9e-30 Score=273.84 Aligned_cols=193 Identities=18% Similarity=0.261 Sum_probs=164.4
Q ss_pred CCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC-HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEeeCC
Q 004248 536 FSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK-TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMP 613 (766)
Q Consensus 536 ~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~-~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey~~ 613 (766)
|...+.||+|++|.||+|.. .+++.||+|+++..... .+.+.+|+.++++++||||+++++++.. .+..++|+||++
T Consensus 21 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~-~~~~~~v~e~~~ 99 (285)
T cd06648 21 LDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLV-GDELWVVMEFLE 99 (285)
T ss_pred hhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEc-CCeEEEEEeccC
Confidence 55568999999999999984 57899999998654433 5568999999999999999999997765 568999999999
Q ss_pred CCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcCCC
Q 004248 614 NGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGD 693 (766)
Q Consensus 614 ~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~~~ 693 (766)
+++|.+++... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+|++|||.+......
T Consensus 100 ~~~L~~~~~~~--------~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~ 168 (285)
T cd06648 100 GGALTDIVTHT--------RMNEEQIATVCLAVLKALSFLHAQ---GVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKE 168 (285)
T ss_pred CCCHHHHHHhC--------CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChhhEEEcCCCcEEEcccccchhhccC
Confidence 99999998652 388999999999999999999997 9999999999999999999999999988755322
Q ss_pred ---CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 694 ---AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 694 ---~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
.....++..|+|||...... ++.++|||||||++|||++|+.||...
T Consensus 169 ~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~Dv~slGv~l~ell~g~~p~~~~ 218 (285)
T cd06648 169 VPRRKSLVGTPYWMAPEVISRLP---------YGTEVDIWSLGIMVIEMVDGEPPYFNE 218 (285)
T ss_pred CcccccccCCccccCHHHhcCCC---------CCCcccHHHHHHHHHHHHhCCCCCcCC
Confidence 12235788999999875443 468999999999999999999998543
No 326
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=99.97 E-value=2.5e-30 Score=272.99 Aligned_cols=192 Identities=22% Similarity=0.305 Sum_probs=163.7
Q ss_pred CCccceeecCCcceEEEEEE-cCCcEEEEEEeecccc--CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEeeC
Q 004248 536 FSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV--KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYM 612 (766)
Q Consensus 536 ~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey~ 612 (766)
|+..+.||+|+||.||+|.. .+++.||||.+..... ..+.+.+|++++++++||||+++++++.+ ++..|+||||+
T Consensus 6 ~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e~~ 84 (277)
T cd06641 6 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLK-DTKLWIIMEYL 84 (277)
T ss_pred hhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEe-CCeEEEEEEeC
Confidence 66778999999999999985 5688999998864432 24578999999999999999999998766 56799999999
Q ss_pred CCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcCC
Q 004248 613 PNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGG 692 (766)
Q Consensus 613 ~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~~ 692 (766)
++|+|.+++... .+++.....++.|++.|++|||+. +++|+||||+||+++.++.++|+|||+++....
T Consensus 85 ~~~~l~~~i~~~--------~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~ 153 (277)
T cd06641 85 GGGSALDLLEPG--------PLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTD 153 (277)
T ss_pred CCCcHHHHHhcC--------CCCHHHHHHHHHHHHHHHHHHccC---CeecCCCCHHhEEECCCCCEEEeecccceeccc
Confidence 999999998632 388999999999999999999997 999999999999999999999999999875532
Q ss_pred C---CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 693 D---AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 693 ~---~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
. .....++..|++||...... .+.++|||||||++|||++|+.||..
T Consensus 154 ~~~~~~~~~~~~~y~~PE~~~~~~---------~~~~~Dv~slG~~l~~l~~g~~p~~~ 203 (277)
T cd06641 154 TQIKRNTFVGTPFWMAPEVIKQSA---------YDSKADIWSLGITAIELAKGEPPHSE 203 (277)
T ss_pred chhhhccccCCccccChhhhccCC---------CCchhhHHHHHHHHHHHHcCCCCCCc
Confidence 1 12235677899999875433 46799999999999999999999853
No 327
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=99.97 E-value=2.7e-30 Score=273.45 Aligned_cols=196 Identities=20% Similarity=0.279 Sum_probs=164.3
Q ss_pred CCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC---HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEee
Q 004248 536 FSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK---TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKY 611 (766)
Q Consensus 536 ~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~---~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey 611 (766)
|+..++||+|++|.||+|.. .+|+.||+|++...... .+.+.+|++++++++|||++++++++.+ ++..|+||||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~-~~~~~iv~e~ 79 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHS-ENKLYLVFEF 79 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheecc-CCeEEEEEec
Confidence 56778999999999999985 57999999998754322 4578899999999999999999998875 5689999999
Q ss_pred CCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcC
Q 004248 612 MPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQG 691 (766)
Q Consensus 612 ~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~ 691 (766)
++ ++|.+++..... ..++|..+..++.|+++||+|||+. +++||||+|+||++++++.+||+|||+++...
T Consensus 80 ~~-~~l~~~~~~~~~-----~~~~~~~~~~~~~~i~~~L~~lH~~---~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~ 150 (283)
T cd07835 80 LD-LDLKKYMDSSPL-----TGLDPPLIKSYLYQLLQGIAYCHSH---RVLHRDLKPQNLLIDREGALKLADFGLARAFG 150 (283)
T ss_pred cC-cCHHHHHhhCCC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCcEEEeecccccccC
Confidence 96 699999875432 2489999999999999999999987 99999999999999999999999999997653
Q ss_pred CC---CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 692 GD---AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 692 ~~---~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
.. .....++..|+|||....... ++.++|||||||++|||+||+.||...
T Consensus 151 ~~~~~~~~~~~~~~~~aPE~~~~~~~--------~~~~~Di~slG~~l~~l~~g~~pf~~~ 203 (283)
T cd07835 151 VPVRTYTHEVVTLWYRAPEILLGSRQ--------YSTPVDIWSIGCIFAEMVNRRPLFPGD 203 (283)
T ss_pred CCccccCccccccCCCCCceeecCcc--------cCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 22 122345778999997654321 468999999999999999999998543
No 328
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.97 E-value=2.4e-30 Score=276.57 Aligned_cols=201 Identities=20% Similarity=0.285 Sum_probs=165.6
Q ss_pred HHhCCCCccceeecCCcceEEEEEE-cCCcEEEEEEeecccc---CHHHHHHHHHHHhhcCCCCcccceeEEEecC----
Q 004248 531 AATGDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV---KTEAYLLELDFFSKVSHARLVPLLGHCMERE---- 602 (766)
Q Consensus 531 ~~~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~---- 602 (766)
...++|+..+.||+|+||.||+|.. .+|+.||||+++.... ....+.+|++++++++||||+++++++.+.+
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 3567899999999999999999996 4689999999975432 2456889999999999999999999876532
Q ss_pred -----CcEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCC
Q 004248 603 -----NEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKF 677 (766)
Q Consensus 603 -----~~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~ 677 (766)
+..++|+||+++ ++.+.+.... ..+++.++..++.|++.||+|||+. +|+||||||+||++++++
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~~------~~~~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~ 153 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGLLESGL------VHFSEDHIKSFMKQLLEGLNYCHKK---NFLHRDIKCSNILLNNKG 153 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHHHhcCC------CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCC
Confidence 268999999986 7777775432 2489999999999999999999997 999999999999999999
Q ss_pred cEEeccchhhhhcCCCC----ccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 678 EVRLGSLSEVCAQGGDA----HQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 678 ~~kl~DFG~a~~~~~~~----~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
.+||+|||+++...... ....++..|++||.+..... .+.++|||||||+++||++|+.||...
T Consensus 154 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~--------~~~~~Di~slG~~~~el~~g~~~~~~~ 221 (302)
T cd07864 154 QIKLADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEER--------YGPAIDVWSCGCILGELFTKKPIFQAN 221 (302)
T ss_pred cEEeCcccccccccCCcccccccceeccCccChHHhcCCCC--------CCchhHHHHHHHHHHHHHhCCCCCCCC
Confidence 99999999997653221 22345778999997753321 467999999999999999999999643
No 329
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.97 E-value=2.5e-30 Score=275.49 Aligned_cols=197 Identities=17% Similarity=0.249 Sum_probs=162.5
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeecccc---CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV---KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVY 609 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~ 609 (766)
++|+..+.||+|++|.||+|+. .+|+.||+|++..... ..+.+.+|++++++++||||+++++++.. .+..|+||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~ 80 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHS-EKRLYLVF 80 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEec-CCeEEEEE
Confidence 5688899999999999999995 4789999999865432 24578899999999999999999998765 56899999
Q ss_pred eeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCC-CCcEEeccchhhh
Q 004248 610 KYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDD-KFEVRLGSLSEVC 688 (766)
Q Consensus 610 Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~-~~~~kl~DFG~a~ 688 (766)
||++ ++|.+++..... ..+++.....++.||+.||+|||+. +|+||||||+||++++ ++.+||+|||+++
T Consensus 81 e~~~-~~l~~~~~~~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dl~p~nill~~~~~~~kl~dfg~~~ 151 (294)
T PLN00009 81 EYLD-LDLKKHMDSSPD-----FAKNPRLIKTYLYQILRGIAYCHSH---RVLHRDLKPQNLLIDRRTNALKLADFGLAR 151 (294)
T ss_pred eccc-ccHHHHHHhCCC-----CCcCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCcceEEEECCCCEEEEccccccc
Confidence 9996 588888754332 2367888889999999999999997 9999999999999985 5679999999997
Q ss_pred hcCCC---CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 689 AQGGD---AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 689 ~~~~~---~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
..... .....++..|+|||.+..... ++.++||||+||++|||+||+.||..
T Consensus 152 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~--------~~~~~Dv~slG~i~~~l~tg~~pf~~ 206 (294)
T PLN00009 152 AFGIPVRTFTHEVVTLWYRAPEILLGSRH--------YSTPVDIWSVGCIFAEMVNQKPLFPG 206 (294)
T ss_pred ccCCCccccccCceeecccCHHHHhCCCC--------CCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 65322 223456789999997654221 47899999999999999999999854
No 330
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=99.97 E-value=1.4e-30 Score=282.88 Aligned_cols=198 Identities=19% Similarity=0.242 Sum_probs=164.9
Q ss_pred hCCCCccceeecCCcceEEEEE-EcCCcEEEEEEeecccc---CHHHHHHHHHHHhhcCCCCcccceeEEEec---CCcE
Q 004248 533 TGDFSDANLIKNGHSGDLFRGI-LEGGIPVVIKRIDLQSV---KTEAYLLELDFFSKVSHARLVPLLGHCMER---ENEK 605 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~-~~~g~~vavK~l~~~~~---~~~~~~~E~~~l~~l~H~niv~l~~~~~~~---~~~~ 605 (766)
.++|+..+.||+|+||.||+|. ..+|+.||+|++..... ..+.+.+|+.++++++||||+++++++... ....
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV 83 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence 3678889999999999999998 45799999999865432 245688899999999999999999876432 2458
Q ss_pred EEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccch
Q 004248 606 FLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLS 685 (766)
Q Consensus 606 ~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG 685 (766)
++||||+. |+|.+++.... .+++.....++.|++.||+|||+. +|+||||||+||++++++.+||+|||
T Consensus 84 ~lv~e~~~-~~l~~~~~~~~-------~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~dfg 152 (334)
T cd07855 84 YVVMDLME-SDLHHIIHSDQ-------PLTEEHIRYFLYQLLRGLKYIHSA---NVIHRDLKPSNLLVNEDCELRIGDFG 152 (334)
T ss_pred EEEEehhh-hhHHHHhccCC-------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEecccc
Confidence 99999996 69999886543 389999999999999999999997 99999999999999999999999999
Q ss_pred hhhhcCCC-------CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 686 EVCAQGGD-------AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 686 ~a~~~~~~-------~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
+++..... .....++..|+|||.+..... ++.++|||||||++|||++|+.||...
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~--------~~~~~Di~slG~~l~el~~g~~pf~~~ 215 (334)
T cd07855 153 MARGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPE--------YTTAIDMWSVGCIFAEMLGRRQLFPGK 215 (334)
T ss_pred cceeecccCcCCCcccccccccccccChHHhcCCcc--------cccccchHHHHHHHHHHHcCCCccCCC
Confidence 98764211 123467889999998654221 478999999999999999999999544
No 331
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.97 E-value=1.9e-30 Score=282.75 Aligned_cols=199 Identities=17% Similarity=0.250 Sum_probs=167.2
Q ss_pred HHhCCCCccceeecCCcceEEEEE-EcCCcEEEEEEeeccccC---HHHHHHHHHHHhhcCCCCcccceeEEEecC----
Q 004248 531 AATGDFSDANLIKNGHSGDLFRGI-LEGGIPVVIKRIDLQSVK---TEAYLLELDFFSKVSHARLVPLLGHCMERE---- 602 (766)
Q Consensus 531 ~~~~~~~~~~~ig~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~---~~~~~~E~~~l~~l~H~niv~l~~~~~~~~---- 602 (766)
...++|+..+.||+|+||.||+|. ..+|+.||||++...... .+.+.+|++++++++||||+++++++....
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07880 12 EVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDR 91 (343)
T ss_pred ccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccc
Confidence 346779999999999999999998 567999999998543221 456889999999999999999999775422
Q ss_pred -CcEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEe
Q 004248 603 -NEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRL 681 (766)
Q Consensus 603 -~~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl 681 (766)
...++||||+ +++|.+++... .+++.++..++.|+++||+|||+. +|+||||||+||+++.++.+|+
T Consensus 92 ~~~~~lv~e~~-~~~l~~~~~~~--------~l~~~~~~~i~~qi~~al~~LH~~---gi~H~dlkp~Nill~~~~~~kl 159 (343)
T cd07880 92 FHDFYLVMPFM-GTDLGKLMKHE--------KLSEDRIQFLVYQMLKGLKYIHAA---GIIHRDLKPGNLAVNEDCELKI 159 (343)
T ss_pred cceEEEEEecC-CCCHHHHHhcC--------CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEE
Confidence 2468999999 67998887532 389999999999999999999997 9999999999999999999999
Q ss_pred ccchhhhhcCCCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 682 GSLSEVCAQGGDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 682 ~DFG~a~~~~~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
+|||+++..........+++.|++||.+..... ++.++||||+||++||+++|+.||...
T Consensus 160 ~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~--------~~~~~Di~slG~ll~~l~~g~~pf~~~ 219 (343)
T cd07880 160 LDFGLARQTDSEMTGYVVTRWYRAPEVILNWMH--------YTQTVDIWSVGCIMAEMLTGKPLFKGH 219 (343)
T ss_pred eecccccccccCccccccCCcccCHHHHhCCCC--------CCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 999999876555555567889999998754221 468999999999999999999999643
No 332
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.97 E-value=4.5e-30 Score=269.70 Aligned_cols=198 Identities=16% Similarity=0.128 Sum_probs=160.9
Q ss_pred HHHHHHHhCCCCcccee--ecCCcceEEEEE-EcCCcEEEEEEeeccccCHHHHHHHHHHHhhc-CCCCcccceeEEEec
Q 004248 526 YQQLLAATGDFSDANLI--KNGHSGDLFRGI-LEGGIPVVIKRIDLQSVKTEAYLLELDFFSKV-SHARLVPLLGHCMER 601 (766)
Q Consensus 526 ~~~l~~~~~~~~~~~~i--g~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~ 601 (766)
..+.....++|+..+.+ |+|+||.||++. ..++..+|+|.+........ |+.....+ +||||+++++.+..
T Consensus 6 ~~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~----e~~~~~~~~~h~~iv~~~~~~~~- 80 (267)
T PHA03390 6 LSELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI----EPMVHQLMKDNPNFIKLYYSVTT- 80 (267)
T ss_pred HHHHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh----hHHHHHHhhcCCCEEEEEEEEec-
Confidence 34555556677777776 999999999998 46788999999865432211 22222222 79999999997766
Q ss_pred CCcEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCC-cEE
Q 004248 602 ENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKF-EVR 680 (766)
Q Consensus 602 ~~~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~-~~k 680 (766)
++..|+||||+++|+|.+++.... .++|.++..++.|+++||+|||+. +++||||||+||+++.++ .+|
T Consensus 81 ~~~~~iv~e~~~~~~L~~~l~~~~-------~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~ 150 (267)
T PHA03390 81 LKGHVLIMDYIKDGDLFDLLKKEG-------KLSEAEVKKIIRQLVEALNDLHKH---NIIHNDIKLENVLYDRAKDRIY 150 (267)
T ss_pred CCeeEEEEEcCCCCcHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEeCCCCeEE
Confidence 568999999999999999997543 489999999999999999999997 899999999999999998 999
Q ss_pred eccchhhhhcCCCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 681 LGSLSEVCAQGGDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 681 l~DFG~a~~~~~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
|+|||+++...... ...++..|+|||...... ++.++||||+||++|||+||+.||..
T Consensus 151 l~dfg~~~~~~~~~-~~~~~~~y~aPE~~~~~~---------~~~~~DvwslG~il~~l~~g~~p~~~ 208 (267)
T PHA03390 151 LCDYGLCKIIGTPS-CYDGTLDYFSPEKIKGHN---------YDVSFDWWAVGVLTYELLTGKHPFKE 208 (267)
T ss_pred EecCccceecCCCc-cCCCCCcccChhhhcCCC---------CCchhhHHHHHHHHHHHHHCCCCCCC
Confidence 99999987664332 235788899999886544 46799999999999999999999963
No 333
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.97 E-value=3e-31 Score=278.15 Aligned_cols=198 Identities=17% Similarity=0.200 Sum_probs=165.1
Q ss_pred cceeecCCcceEEEEE-EcCCcEEEEEEeecccc---CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEeeCCC
Q 004248 539 ANLIKNGHSGDLFRGI-LEGGIPVVIKRIDLQSV---KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPN 614 (766)
Q Consensus 539 ~~~ig~G~~g~Vy~~~-~~~g~~vavK~l~~~~~---~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey~~~ 614 (766)
.+++|+|.||+||-|+ .++|+.||||.+++-.. +....++|+.||++++||.||.+-..| ++.+.+++|||-+.
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~-ET~ervFVVMEKl~- 646 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMF-ETPERVFVVMEKLH- 646 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEee-cCCceEEEEehhhc-
Confidence 4789999999999998 67899999999976543 256789999999999999999987644 45678999999996
Q ss_pred CChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCC---CcEEeccchhhhhcC
Q 004248 615 GDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDK---FEVRLGSLSEVCAQG 691 (766)
Q Consensus 615 GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~---~~~kl~DFG~a~~~~ 691 (766)
||..+.|-.... ..+++...+.+..||+.||.|||.+ +|+|+|+||+|||+.+. -++||||||+||.++
T Consensus 647 GDMLEMILSsEk-----gRL~er~TkFlvtQIL~ALr~LH~k---nIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIg 718 (888)
T KOG4236|consen 647 GDMLEMILSSEK-----GRLPERITKFLVTQILVALRYLHFK---NIVHCDLKPENVLLASASPFPQVKLCDFGFARIIG 718 (888)
T ss_pred chHHHHHHHhhc-----ccchHHHHHHHHHHHHHHHHHhhhc---ceeeccCCchheeeccCCCCCceeeccccceeecc
Confidence 566665543221 2489999999999999999999998 99999999999999754 369999999999997
Q ss_pred CC--CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCCcccccc
Q 004248 692 GD--AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSSRFGVKQ 755 (766)
Q Consensus 692 ~~--~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~~~~~~~ 755 (766)
+. ....+||++|.|||++....| +..-|+||.|||+|--++|-.||...+.-.+|
T Consensus 719 EksFRrsVVGTPAYLaPEVLrnkGy---------NrSLDMWSVGVIiYVsLSGTFPFNEdEdIndQ 775 (888)
T KOG4236|consen 719 EKSFRRSVVGTPAYLAPEVLRNKGY---------NRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQ 775 (888)
T ss_pred hhhhhhhhcCCccccCHHHHhhccc---------cccccceeeeEEEEEEecccccCCCccchhHH
Confidence 65 356789999999999876653 56789999999999999999999554444333
No 334
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=99.97 E-value=3.9e-30 Score=272.76 Aligned_cols=199 Identities=19% Similarity=0.275 Sum_probs=170.0
Q ss_pred HhCCCCccceeecCCcceEEEEEEc-CCcEEEEEEeeccccCHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEe
Q 004248 532 ATGDFSDANLIKNGHSGDLFRGILE-GGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYK 610 (766)
Q Consensus 532 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~E 610 (766)
.++.|+..+.||+|++|.||+|... ++..||+|++.......+.+.+|++++++++|+||+++++++.. ++..|+|+|
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~lv~e 95 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDCKHPNIVDYYDSYLV-GDELWVVME 95 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCchhHHHHHHHHHHHHHCCCCCeeEEEEEEEE-CCEEEEEEe
Confidence 4556788899999999999999965 68899999997654446679999999999999999999998776 578999999
Q ss_pred eCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhc
Q 004248 611 YMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQ 690 (766)
Q Consensus 611 y~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~ 690 (766)
|+++++|.+++.... ..+++..+..++.|++.||+|||+. +|+|+||||+||+++.++.+||+|||++...
T Consensus 96 ~~~~~~L~~~l~~~~------~~l~~~~~~~i~~~i~~~L~~lH~~---gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~ 166 (286)
T cd06614 96 YMDGGSLTDIITQNF------VRMNEPQIAYVCREVLQGLEYLHSQ---NVIHRDIKSDNILLSKDGSVKLADFGFAAQL 166 (286)
T ss_pred ccCCCcHHHHHHHhc------cCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCChhhEEEcCCCCEEECccchhhhh
Confidence 999999999998653 2489999999999999999999997 9999999999999999999999999988755
Q ss_pred CCC---CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 691 GGD---AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 691 ~~~---~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
... .....++..|++||...... ++.++|||||||++|||+||+.||...
T Consensus 167 ~~~~~~~~~~~~~~~y~~PE~~~~~~---------~~~~~Dv~slGvil~~l~~g~~p~~~~ 219 (286)
T cd06614 167 TKEKSKRNSVVGTPYWMAPEVIKRKD---------YGPKVDIWSLGIMCIEMAEGEPPYLRE 219 (286)
T ss_pred ccchhhhccccCCcccCCHhHhcCCC---------CCCccccHHHHHHHHHHHhCCCCCCCC
Confidence 322 12234567899999875443 478999999999999999999998543
No 335
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.97 E-value=4.2e-30 Score=276.90 Aligned_cols=196 Identities=21% Similarity=0.295 Sum_probs=163.6
Q ss_pred CCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC----HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEe
Q 004248 536 FSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK----TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYK 610 (766)
Q Consensus 536 ~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~----~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~E 610 (766)
|+..+.||+|+||.||+|+. .++..||+|++...... .+++.+|++++++++|||+|++++++.+ ++..++|||
T Consensus 27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e 105 (317)
T cd06635 27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLR-EHTAWLVME 105 (317)
T ss_pred hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-CCeEEEEEe
Confidence 66778999999999999994 57899999998654322 3478899999999999999999998876 567899999
Q ss_pred eCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhc
Q 004248 611 YMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQ 690 (766)
Q Consensus 611 y~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~ 690 (766)
|++ |+|.+.+.... ..++|.++..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 106 ~~~-g~l~~~~~~~~------~~l~~~~~~~i~~~i~~~l~~lH~~---~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~ 175 (317)
T cd06635 106 YCL-GSASDLLEVHK------KPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASIA 175 (317)
T ss_pred CCC-CCHHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcccEEECCCCCEEEecCCCcccc
Confidence 997 58888775432 2489999999999999999999997 9999999999999999999999999998755
Q ss_pred CCCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 691 GGDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 691 ~~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
.. .....++..|+|||.......+. ++.++|||||||++|||++|+.||...
T Consensus 176 ~~-~~~~~~~~~y~aPE~~~~~~~~~------~~~~~Dv~slGvil~el~~g~~p~~~~ 227 (317)
T cd06635 176 SP-ANSFVGTPYWMAPEVILAMDEGQ------YDGKVDVWSLGITCIELAERKPPLFNM 227 (317)
T ss_pred CC-cccccCCccccChhhhhcCCCCC------CCccccHHHHHHHHHHHHhCCCCCCCc
Confidence 32 23345788899999864322222 578999999999999999999998643
No 336
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=4.5e-31 Score=263.34 Aligned_cols=195 Identities=18% Similarity=0.204 Sum_probs=169.9
Q ss_pred hCCCCccceeecCCcceEEEEE-EcCCcEEEEEEeeccccC----HHHHHHHHHHHhhc-CCCCcccceeEEEecCCcEE
Q 004248 533 TGDFSDANLIKNGHSGDLFRGI-LEGGIPVVIKRIDLQSVK----TEAYLLELDFFSKV-SHARLVPLLGHCMERENEKF 606 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~----~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~~ 606 (766)
.++|+..++||+|+|++|..+. .++.+.+|+|++++.-.. ..-...|-.+..+. +||.+|.++. |++++..++
T Consensus 249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhs-cfqtesrlf 327 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHS-CFQTESRLF 327 (593)
T ss_pred cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhh-hhcccceEE
Confidence 4679999999999999999998 567899999999764332 22345566666665 7999999997 777788999
Q ss_pred EEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchh
Q 004248 607 LVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSE 686 (766)
Q Consensus 607 lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~ 686 (766)
+|.||++||+|.-++.+++. ++++....+..+|..||.|||++ +||.||+|..|||+|..|++|++|+|+
T Consensus 328 fvieyv~ggdlmfhmqrqrk-------lpeeharfys~ei~lal~flh~r---giiyrdlkldnvlldaeghikltdygm 397 (593)
T KOG0695|consen 328 FVIEYVNGGDLMFHMQRQRK-------LPEEHARFYSAEICLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGM 397 (593)
T ss_pred EEEEEecCcceeeehhhhhc-------CcHHHhhhhhHHHHHHHHHHhhc---CeeeeeccccceEEccCCceeecccch
Confidence 99999999999988876654 99999999999999999999998 999999999999999999999999999
Q ss_pred hhhc---CCCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCC
Q 004248 687 VCAQ---GGDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNL 747 (766)
Q Consensus 687 a~~~---~~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~ 747 (766)
++.- ++.+++.+||+.|.|||++.+..|| ..+|+|++||+++||+.|+.||+
T Consensus 398 cke~l~~gd~tstfcgtpnyiapeilrgeeyg---------fsvdwwalgvlmfemmagrspfd 452 (593)
T KOG0695|consen 398 CKEGLGPGDTTSTFCGTPNYIAPEILRGEEYG---------FSVDWWALGVLMFEMMAGRSPFD 452 (593)
T ss_pred hhcCCCCCcccccccCCCcccchhhhcccccC---------ceehHHHHHHHHHHHHcCCCCcc
Confidence 9864 4557788999999999999888865 47799999999999999999994
No 337
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.97 E-value=1e-30 Score=277.40 Aligned_cols=200 Identities=21% Similarity=0.258 Sum_probs=161.3
Q ss_pred CCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC--HHHHHHHHHHHhhcC-CCCcccceeEEEecCCcEEEEEe
Q 004248 535 DFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK--TEAYLLELDFFSKVS-HARLVPLLGHCMERENEKFLVYK 610 (766)
Q Consensus 535 ~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~--~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~~lV~E 610 (766)
+|...+.||+|+||.||++.. .+++.||+|++...... ..++.+|+.++.++. |||||++++++.. ++..+++||
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~-~~~~~~~~e 83 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFR-EGDCWICME 83 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEec-CCcEEEEEe
Confidence 455678999999999999984 56899999998754322 557899999999996 9999999998765 567899999
Q ss_pred eCCCCChhhhh---hccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhh
Q 004248 611 YMPNGDLSSSL---YRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEV 687 (766)
Q Consensus 611 y~~~GsL~~~l---~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a 687 (766)
|++. ++.++. ..... ..+++.....++.|++.||+|||+. .+|+||||||+||++++++.+||+|||++
T Consensus 84 ~~~~-~l~~l~~~~~~~~~-----~~l~~~~~~~i~~~i~~~l~~lh~~--~~i~H~dlkp~Nil~~~~~~~kl~dfg~~ 155 (288)
T cd06616 84 LMDI-SLDKFYKYVYEVLK-----SVIPEEILGKIAVATVKALNYLKEE--LKIIHRDVKPSNILLDRNGNIKLCDFGIS 155 (288)
T ss_pred cccC-CHHHHHHHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHhhc--CCeeccCCCHHHEEEccCCcEEEeecchh
Confidence 9974 665543 22211 3489999999999999999999974 38999999999999999999999999999
Q ss_pred hhcCCC--CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 688 CAQGGD--AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 688 ~~~~~~--~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
+..... .....++..|+|||.+....... ++.++|||||||++|||++|+.||...
T Consensus 156 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~------~~~~~Di~slG~il~el~~g~~p~~~~ 213 (288)
T cd06616 156 GQLVDSIAKTRDAGCRPYMAPERIDPSARDG------YDVRSDVWSLGITLYEVATGKFPYPKW 213 (288)
T ss_pred HHhccCCccccccCccCccCHHHhccccccC------CcchhhhhHHHHHHHHHHhCCCCchhc
Confidence 765322 23345788899999876542111 578999999999999999999998543
No 338
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=99.97 E-value=2.6e-30 Score=273.41 Aligned_cols=197 Identities=17% Similarity=0.310 Sum_probs=164.6
Q ss_pred CCCCccceeecCCcceEEEEEEc-----CCcEEEEEEeeccccC--HHHHHHHHHHHhhcCCCCcccceeEEEec-CCcE
Q 004248 534 GDFSDANLIKNGHSGDLFRGILE-----GGIPVVIKRIDLQSVK--TEAYLLELDFFSKVSHARLVPLLGHCMER-ENEK 605 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~~-----~g~~vavK~l~~~~~~--~~~~~~E~~~l~~l~H~niv~l~~~~~~~-~~~~ 605 (766)
++|+..+.||+|+||.||+|... +++.||||.+...... .+.|.+|++++++++||||+++++++... ....
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSL 83 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCce
Confidence 35777899999999999999843 3789999999765543 56899999999999999999999977542 3468
Q ss_pred EEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccch
Q 004248 606 FLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLS 685 (766)
Q Consensus 606 ~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG 685 (766)
++||||+++|+|.+++..... .++|.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 84 ~lv~e~~~~~~l~~~l~~~~~------~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg 154 (284)
T cd05038 84 RLIMEYLPSGSLRDYLQRHRD------QINLKRLLLFSSQICKGMDYLGSQ---RYIHRDLAARNILVESEDLVKISDFG 154 (284)
T ss_pred EEEEecCCCCCHHHHHHhCcc------ccCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccc
Confidence 999999999999999976432 489999999999999999999987 99999999999999999999999999
Q ss_pred hhhhcCCCCc------cceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 686 EVCAQGGDAH------QSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 686 ~a~~~~~~~~------~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
.+........ ....+..|++||...... ++.++|||||||+++||+||+.|+..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~---------~~~~~Di~slG~~l~el~tg~~p~~~ 214 (284)
T cd05038 155 LAKVLPEDKDYYYVKEPGESPIFWYAPECLRTSK---------FSSASDVWSFGVTLYELFTYGDPSQS 214 (284)
T ss_pred cccccccCCcceeccCCCCCcccccCcHHHccCC---------CCcccchHHHhhhhheeeccCCCccc
Confidence 9987642211 122345689999775443 46789999999999999999999854
No 339
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.97 E-value=3.4e-30 Score=276.19 Aligned_cols=199 Identities=18% Similarity=0.259 Sum_probs=163.0
Q ss_pred hCCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC---HHHHHHHHHHHhhcCCCCcccceeEEEecC------
Q 004248 533 TGDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK---TEAYLLELDFFSKVSHARLVPLLGHCMERE------ 602 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~---~~~~~~E~~~l~~l~H~niv~l~~~~~~~~------ 602 (766)
.++|+..+.||+|+||.||+|+. .+++.||||++...... ...+.+|++++++++||||++++++|...+
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 90 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRY 90 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCC
Confidence 45788999999999999999995 56899999998653322 345678999999999999999999876432
Q ss_pred -CcEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEe
Q 004248 603 -NEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRL 681 (766)
Q Consensus 603 -~~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl 681 (766)
...++||||++ ++|.+.+.... ..+++.+...++.|++.||+|||+. +|+||||||+||+++.++.+||
T Consensus 91 ~~~~~lv~e~~~-~~l~~~l~~~~------~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl 160 (310)
T cd07865 91 KGSFYLVFEFCE-HDLAGLLSNKN------VKFTLSEIKKVMKMLLNGLYYIHRN---KILHRDMKAANILITKDGILKL 160 (310)
T ss_pred CceEEEEEcCCC-cCHHHHHHhcc------cCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEECCCCcEEE
Confidence 24599999997 48888886532 2489999999999999999999997 9999999999999999999999
Q ss_pred ccchhhhhcCCCC-------ccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 682 GSLSEVCAQGGDA-------HQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 682 ~DFG~a~~~~~~~-------~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
+|||++....... ....++..|+|||....... ++.++|||||||++|||+||+.||...
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~--------~~~~~Di~slG~~l~el~t~~~~~~~~ 227 (310)
T cd07865 161 ADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERD--------YGPPIDMWGAGCIMAEMWTRSPIMQGN 227 (310)
T ss_pred CcCCCcccccCCcccCCCCccCcccCccccCcHHhcCCcc--------cCchhhhHHHHHHHHHHHhCCCCCCCC
Confidence 9999997652211 22346778999997654321 467999999999999999999988543
No 340
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.97 E-value=4.1e-30 Score=268.82 Aligned_cols=189 Identities=15% Similarity=0.130 Sum_probs=161.8
Q ss_pred eecCCcceEEEEEE-cCCcEEEEEEeecccc----CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEeeCCCCC
Q 004248 542 IKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV----KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGD 616 (766)
Q Consensus 542 ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~----~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey~~~Gs 616 (766)
||+|+||.||+|+. .+++.||+|.+..... ..+.+.+|++++++++||||+++++++.+ ++..++||||+++|+
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~~~~~ 79 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKD-KKYIYMLMEYCLGGE 79 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEc-CCccEEEEecCCCCc
Confidence 69999999999995 4589999999975432 24579999999999999999999997765 568999999999999
Q ss_pred hhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcCCC--C
Q 004248 617 LSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGD--A 694 (766)
Q Consensus 617 L~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~~~--~ 694 (766)
|.+++.+.. .+++.++..++.|++.||+|||+. +++|+||||+||+++.++.+||+|||+++..... .
T Consensus 80 L~~~l~~~~-------~l~~~~~~~~~~~i~~~l~~lH~~---~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~~~ 149 (262)
T cd05572 80 LWTILRDRG-------LFDEYTARFYIACVVLAFEYLHNR---GIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQKT 149 (262)
T ss_pred HHHHHhhcC-------CCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEEcCCCCEEEeeCCcccccCccccc
Confidence 999997643 388999999999999999999997 9999999999999999999999999999876432 2
Q ss_pred ccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCCc
Q 004248 695 HQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSSR 750 (766)
Q Consensus 695 ~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~~ 750 (766)
....++..|++||...... ++.++|+||+||++|||++|+.||....
T Consensus 150 ~~~~~~~~~~~PE~~~~~~---------~~~~~Di~slG~il~~l~~g~~p~~~~~ 196 (262)
T cd05572 150 WTFCGTPEYVAPEIILNKG---------YDFSVDYWSLGILLYELLTGRPPFGEDD 196 (262)
T ss_pred ccccCCcCccChhHhcCCC---------CCChhhhhhhHHHHHHHHhCCCCcCCCC
Confidence 2345678899999865433 4789999999999999999999996444
No 341
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=99.97 E-value=5.2e-30 Score=269.63 Aligned_cols=201 Identities=17% Similarity=0.281 Sum_probs=159.7
Q ss_pred CCccceeecCCcceEEEEEEc----CCcEEEEEEeecccc---CHHHHHHHHHHHhhcCCCCcccceeEEEecCC-----
Q 004248 536 FSDANLIKNGHSGDLFRGILE----GGIPVVIKRIDLQSV---KTEAYLLELDFFSKVSHARLVPLLGHCMEREN----- 603 (766)
Q Consensus 536 ~~~~~~ig~G~~g~Vy~~~~~----~g~~vavK~l~~~~~---~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~----- 603 (766)
|...++||+|+||.||+|.+. +++.||||++..... ..+++.+|++++++++||||+++++++...+.
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 556789999999999999843 368999999865432 24578999999999999999999997754221
Q ss_pred cEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEecc
Q 004248 604 EKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGS 683 (766)
Q Consensus 604 ~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~D 683 (766)
..++++||+++|+|.+++...... .....+++....+++.|++.||+|||+. +|+||||||+||++++++.+|++|
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~nili~~~~~~kl~d 156 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIG-EEPFTLPLQTLVRFMIDIASGMEYLSSK---NFIHRDLAARNCMLNENMTVCVAD 156 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhccc-CCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccchhhEEEcCCCCEEECc
Confidence 247899999999999887533211 1123489999999999999999999987 999999999999999999999999
Q ss_pred chhhhhcCCC-----CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCCC
Q 004248 684 LSEVCAQGGD-----AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLSS 749 (766)
Q Consensus 684 FG~a~~~~~~-----~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~~ 749 (766)
||+++..... .....++..|++||...... ++.++|||||||++|||++ |+.||...
T Consensus 157 fg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~---------~~~~sDi~slG~il~el~~~g~~p~~~~ 219 (273)
T cd05074 157 FGLSKKIYSGDYYRQGCASKLPVKWLALESLADNV---------YTTHSDVWAFGVTMWEIMTRGQTPYAGV 219 (273)
T ss_pred ccccccccCCcceecCCCccCchhhcCHhHHhcCc---------cchhhhhHHHHHHHHHHhhCCCCCCCCC
Confidence 9999865321 11223446788999765433 4789999999999999999 88888533
No 342
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=99.97 E-value=3.3e-30 Score=282.06 Aligned_cols=196 Identities=18% Similarity=0.219 Sum_probs=163.9
Q ss_pred HhCCCCccceeecCCcceEEEEEE-cCCcEEEEEEeecccc---CHHHHHHHHHHHhhcCCCCcccceeEEEecC-----
Q 004248 532 ATGDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV---KTEAYLLELDFFSKVSHARLVPLLGHCMERE----- 602 (766)
Q Consensus 532 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~----- 602 (766)
..++|+..+.||+|+||.||+|.. .+|+.||||++..... ..+++.+|++++++++||||+++++++....
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 93 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence 457799999999999999999994 5799999999864322 2456888999999999999999999765321
Q ss_pred CcEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEec
Q 004248 603 NEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLG 682 (766)
Q Consensus 603 ~~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~ 682 (766)
...|+||||++ |+|.+.+.. .+++.++..++.|++.||+|||+. +|+||||||+||++++++.+||+
T Consensus 94 ~~~~lv~e~~~-~~l~~~~~~---------~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nil~~~~~~~kL~ 160 (353)
T cd07850 94 QDVYLVMELMD-ANLCQVIQM---------DLDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKIL 160 (353)
T ss_pred CcEEEEEeccC-CCHHHHHhh---------cCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEc
Confidence 24799999997 588887752 278889999999999999999997 99999999999999999999999
Q ss_pred cchhhhhcCCC--CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 683 SLSEVCAQGGD--AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 683 DFG~a~~~~~~--~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
|||+++..... .....++..|+|||...... ++.++|||||||++|||++|+.||...
T Consensus 161 Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~DvwslG~~l~~l~~g~~pf~~~ 220 (353)
T cd07850 161 DFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG---------YKENVDIWSVGCIMGEMIRGTVLFPGT 220 (353)
T ss_pred cCccceeCCCCCCCCCCcccccccCHHHHhCCC---------CCCchhhHhHHHHHHHHHHCCCCCCCC
Confidence 99999866432 23345788899999875543 478999999999999999999998543
No 343
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.97 E-value=4.1e-30 Score=272.15 Aligned_cols=197 Identities=19% Similarity=0.271 Sum_probs=165.0
Q ss_pred CCccceeecCCcceEEEEEEc-CCcEEEEEEeeccc---cCHHHHHHHHHHHhhcCCCCcccceeEEEec-CCcEEEEEe
Q 004248 536 FSDANLIKNGHSGDLFRGILE-GGIPVVIKRIDLQS---VKTEAYLLELDFFSKVSHARLVPLLGHCMER-ENEKFLVYK 610 (766)
Q Consensus 536 ~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-~~~~~lV~E 610 (766)
|+..+.||+|+||.||+|+.. +++.||+|++.... ...+.+.+|++++++++|||++++++++... .+..++|||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 567789999999999999954 58999999997653 2245788999999999999999999988763 267999999
Q ss_pred eCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhc
Q 004248 611 YMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQ 690 (766)
Q Consensus 611 y~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~ 690 (766)
|+++ +|.+++.+.. ..+++.++..++.|++.||+|||+. +++|+||||+||++++++.+||+|||++...
T Consensus 81 ~~~~-~l~~~~~~~~------~~~~~~~~~~i~~~i~~al~~LH~~---~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~ 150 (287)
T cd07840 81 YMDH-DLTGLLDSPE------VKFTESQIKCYMKQLLEGLQYLHSN---GILHRDIKGSNILINNDGVLKLADFGLARPY 150 (287)
T ss_pred cccc-cHHHHHhccC------CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEEcCCCCEEEccccceeec
Confidence 9984 9998886542 2489999999999999999999997 9999999999999999999999999999766
Q ss_pred CCC----CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCCc
Q 004248 691 GGD----AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSSR 750 (766)
Q Consensus 691 ~~~----~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~~ 750 (766)
... .....++..|+|||....... ++.++|||||||++|||+||+.||....
T Consensus 151 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~--------~~~~~Dv~slG~~l~el~t~~~p~~~~~ 206 (287)
T cd07840 151 TKRNSADYTNRVITLWYRPPELLLGATR--------YGPEVDMWSVGCILAELFLGKPIFQGST 206 (287)
T ss_pred cCCCcccccccccccccCCceeeEcccc--------CChHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 332 233456778999997643221 4789999999999999999999986443
No 344
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=99.97 E-value=3.8e-30 Score=276.74 Aligned_cols=201 Identities=16% Similarity=0.234 Sum_probs=163.3
Q ss_pred CCCccceeecCCcceEEEEEEc---CCcEEEEEEeeccc---c-CHHHHHHHHHHHhhcCCCCcccceeEEEec-CCcEE
Q 004248 535 DFSDANLIKNGHSGDLFRGILE---GGIPVVIKRIDLQS---V-KTEAYLLELDFFSKVSHARLVPLLGHCMER-ENEKF 606 (766)
Q Consensus 535 ~~~~~~~ig~G~~g~Vy~~~~~---~g~~vavK~l~~~~---~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-~~~~~ 606 (766)
.|+..+.||+|+||.||+|+.. +++.||+|.+.... . ..+.+.+|++++++++||||+++++++... ++..+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 3677889999999999999953 58999999997633 1 246788999999999999999999988763 15799
Q ss_pred EEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCC----CCcEEec
Q 004248 607 LVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDD----KFEVRLG 682 (766)
Q Consensus 607 lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~----~~~~kl~ 682 (766)
+||||+++ +|.+++...... ....+++.....++.|++.||+|||+. +|+||||||+||+++. ++.+||+
T Consensus 81 lv~e~~~~-~l~~~~~~~~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~h~dlkp~Nil~~~~~~~~~~~kl~ 154 (316)
T cd07842 81 LLFDYAEH-DLWQIIKFHRQA--KRVSIPPSMVKSLLWQILNGVHYLHSN---WVLHRDLKPANILVMGEGPERGVVKIG 154 (316)
T ss_pred EEEeCCCc-CHHHHHHhhccC--CCcCcCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEEcCCCCccceEEEC
Confidence 99999985 787777543221 113588999999999999999999997 8999999999999999 8999999
Q ss_pred cchhhhhcCCC------CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 683 SLSEVCAQGGD------AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 683 DFG~a~~~~~~------~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
|||+++..... .....++..|+|||....... ++.++|||||||++|||++|+.||...
T Consensus 155 Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~--------~~~~~Dv~slG~~l~~l~~~~~~~~~~ 219 (316)
T cd07842 155 DLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARH--------YTKAIDIWAIGCIFAELLTLEPIFKGR 219 (316)
T ss_pred CCccccccCCCcccccccCCccccccccCHHHHhCCCC--------CCcHHHHHHHHHHHHHHHhcCCCCcCC
Confidence 99998865322 123356788999997644321 478999999999999999999999533
No 345
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=2.4e-31 Score=291.94 Aligned_cols=193 Identities=21% Similarity=0.288 Sum_probs=159.3
Q ss_pred CCccceeecCCcceEEEEEE-cCC----cEEEEEEeeccccC--HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEE
Q 004248 536 FSDANLIKNGHSGDLFRGIL-EGG----IPVVIKRIDLQSVK--TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLV 608 (766)
Q Consensus 536 ~~~~~~ig~G~~g~Vy~~~~-~~g----~~vavK~l~~~~~~--~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV 608 (766)
.....+||+|+||+||||.+ +.| .+||||++...... .+++++|+-+|.+++|||+++++|+|.. ..+.||
T Consensus 698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~--s~~qlv 775 (1177)
T KOG1025|consen 698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCML--STLQLV 775 (1177)
T ss_pred hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhccc--chHHHH
Confidence 34568999999999999984 443 58999998665443 6789999999999999999999999976 358999
Q ss_pred EeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhh
Q 004248 609 YKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVC 688 (766)
Q Consensus 609 ~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~ 688 (766)
++|||.|+|.++++.++. .+.-...+.+..|||+||.|||++ ++|||||.++|||+.+-..+||.|||+|+
T Consensus 776 tq~mP~G~LlDyvr~hr~------~igsq~lLnw~~QIAkgM~YLe~q---rlVHrdLaaRNVLVksP~hvkitdfgla~ 846 (1177)
T KOG1025|consen 776 TQLMPLGCLLDYVREHRD------NIGSQDLLNWCYQIAKGMKYLEEQ---RLVHRDLAARNVLVKSPNHVKITDFGLAK 846 (1177)
T ss_pred HHhcccchHHHHHHHhhc------cccHHHHHHHHHHHHHHHHHHHhc---chhhhhhhhhheeecCCCeEEEEecchhh
Confidence 999999999999987653 477788899999999999999998 99999999999999999999999999999
Q ss_pred hcCCCCccce-----eeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCC
Q 004248 689 AQGGDAHQSR-----ITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLS 748 (766)
Q Consensus 689 ~~~~~~~~~~-----~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~ 748 (766)
....+...+. ...-++|-|.+.... +|.++|||||||.+||++| |.+|++.
T Consensus 847 ll~~d~~ey~~~~gK~pikwmale~i~~~~---------~thqSDVWsfGVtiWElmTFGa~Py~g 903 (1177)
T KOG1025|consen 847 LLAPDEKEYSAPGGKVPIKWMALESIRIRK---------YTHQSDVWSFGVTIWELMTFGAKPYDG 903 (1177)
T ss_pred ccCcccccccccccccCcHHHHHHHhhccC---------CCchhhhhhhhhhHHHHHhcCCCccCC
Confidence 8754433211 122344444443332 6899999999999999998 8999864
No 346
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=99.97 E-value=3.5e-30 Score=268.18 Aligned_cols=197 Identities=20% Similarity=0.267 Sum_probs=165.7
Q ss_pred CCCccceeecCCcceEEEEEE-cCCcEEEEEEeecccc---CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEe
Q 004248 535 DFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV---KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYK 610 (766)
Q Consensus 535 ~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~E 610 (766)
+|+..+.||+|+||.||+|.. .+|..||+|.+..... ..+.+.+|++++++++||||+++++.+.. ++..++|+|
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~-~~~~~lv~e 79 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQE-NGRLFIVME 79 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheecc-CCeEEEEEe
Confidence 477889999999999999995 5688999999865422 34578899999999999999999997765 568999999
Q ss_pred eCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCC-cEEeccchhhhh
Q 004248 611 YMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKF-EVRLGSLSEVCA 689 (766)
Q Consensus 611 y~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~-~~kl~DFG~a~~ 689 (766)
|+++++|.+++.+... ..++|..+..++.|++.||+|||+. +|+||||||+||++++++ .+||+|||.+..
T Consensus 80 ~~~~~~L~~~~~~~~~-----~~~~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~ 151 (257)
T cd08225 80 YCDGGDLMKRINRQRG-----VLFSEDQILSWFVQISLGLKHIHDR---KILHRDIKSQNIFLSKNGMVAKLGDFGIARQ 151 (257)
T ss_pred cCCCCcHHHHHHhccC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEcCCCCeEEecccccchh
Confidence 9999999999975432 3479999999999999999999987 999999999999999885 479999999876
Q ss_pred cCCCC---ccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 690 QGGDA---HQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 690 ~~~~~---~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
..... ....++..|+|||...... ++.++|||||||+++||++|+.||...
T Consensus 152 ~~~~~~~~~~~~~~~~~~ape~~~~~~---------~~~~~Dv~slG~il~~l~~g~~p~~~~ 205 (257)
T cd08225 152 LNDSMELAYTCVGTPYYLSPEICQNRP---------YNNKTDIWSLGCVLYELCTLKHPFEGN 205 (257)
T ss_pred ccCCcccccccCCCccccCHHHHcCCC---------CCchhhHHHHHHHHHHHHhCCCCCCCc
Confidence 54321 2235778899999765433 478999999999999999999998543
No 347
>PHA03210 serine/threonine kinase US3; Provisional
Probab=99.97 E-value=1.2e-30 Score=297.58 Aligned_cols=199 Identities=15% Similarity=0.144 Sum_probs=153.9
Q ss_pred HhCCCCccceeecCCcceEEEEEEc--CCcEEEEE------------------EeeccccCHHHHHHHHHHHhhcCCCCc
Q 004248 532 ATGDFSDANLIKNGHSGDLFRGILE--GGIPVVIK------------------RIDLQSVKTEAYLLELDFFSKVSHARL 591 (766)
Q Consensus 532 ~~~~~~~~~~ig~G~~g~Vy~~~~~--~g~~vavK------------------~l~~~~~~~~~~~~E~~~l~~l~H~ni 591 (766)
..++|+..+.||+|+||+||+|... ++..+++| ++.......+.+.+|+++|++++||||
T Consensus 146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI 225 (501)
T PHA03210 146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI 225 (501)
T ss_pred hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence 3568999999999999999998743 22222222 111111123568899999999999999
Q ss_pred ccceeEEEecCCcEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCe
Q 004248 592 VPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSI 671 (766)
Q Consensus 592 v~l~~~~~~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NI 671 (766)
|++++++.. ++..|+|+||+. ++|.+++...... ........+...|+.|++.||+|||+. +||||||||+||
T Consensus 226 v~l~~~~~~-~~~~~lv~e~~~-~~l~~~l~~~~~~--~~~~~~~~~~~~i~~ql~~aL~yLH~~---gIiHrDLKP~NI 298 (501)
T PHA03210 226 LKIEEILRS-EANTYMITQKYD-FDLYSFMYDEAFD--WKDRPLLKQTRAIMKQLLCAVEYIHDK---KLIHRDIKLENI 298 (501)
T ss_pred CcEeEEEEE-CCeeEEEEeccc-cCHHHHHhhcccc--ccccccHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHE
Confidence 999998765 567899999996 5888877543211 011234566778999999999999997 999999999999
Q ss_pred eeCCCCcEEeccchhhhhcCCC----CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCC
Q 004248 672 LLDDKFEVRLGSLSEVCAQGGD----AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLN 746 (766)
Q Consensus 672 Ll~~~~~~kl~DFG~a~~~~~~----~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~ 746 (766)
|++.++.+||+|||+++..... .....||..|+|||.+.... ++.++|||||||++|||++|+.|+
T Consensus 299 Ll~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---------~~~~~DiwSlGvil~ell~~~~~p 368 (501)
T PHA03210 299 FLNCDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDG---------YCEITDIWSCGLILLDMLSHDFCP 368 (501)
T ss_pred EECCCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCC---------CCcHHHHHHHHHHHHHHHHCCCCC
Confidence 9999999999999999866332 22346899999999886544 468999999999999999998654
No 348
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.97 E-value=3.2e-30 Score=280.32 Aligned_cols=197 Identities=20% Similarity=0.273 Sum_probs=163.5
Q ss_pred HhCCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccc---cCHHHHHHHHHHHhhc-CCCCcccceeEEEec-CCcE
Q 004248 532 ATGDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQS---VKTEAYLLELDFFSKV-SHARLVPLLGHCMER-ENEK 605 (766)
Q Consensus 532 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~-~~~~ 605 (766)
..++|+..+.||+|+||.||+|.. .+|+.||||++.... .....+.+|+.+++++ +||||+++++++... ....
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~ 84 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDI 84 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceE
Confidence 346788889999999999999995 468899999985422 2245678899999999 999999999987643 2358
Q ss_pred EEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccch
Q 004248 606 FLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLS 685 (766)
Q Consensus 606 ~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG 685 (766)
|+||||++ ++|.+++.+. .++|..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 85 ~lv~e~~~-~~L~~~~~~~--------~~~~~~~~~i~~qi~~~L~~LH~~---~i~H~dl~p~nill~~~~~~kl~d~g 152 (337)
T cd07852 85 YLVFEYME-TDLHAVIRAN--------ILEDVHKRYIMYQLLKALKYIHSG---NVIHRDLKPSNILLNSDCRVKLADFG 152 (337)
T ss_pred EEEecccc-cCHHHHHhcC--------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeecc
Confidence 99999998 5999888643 378999999999999999999987 99999999999999999999999999
Q ss_pred hhhhcCCC--------CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 686 EVCAQGGD--------AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 686 ~a~~~~~~--------~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
+++..... .....++..|+|||.+..... .+.++|||||||++|||+||+.||..
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~--------~~~~sDi~slG~~l~el~tg~~pf~~ 215 (337)
T cd07852 153 LARSLSELEENPENPVLTDYVATRWYRAPEILLGSTR--------YTKGVDMWSVGCILGEMLLGKPLFPG 215 (337)
T ss_pred chhccccccccccCcchhcccccccccCceeeecccc--------ccccchHHHHHHHHHHHHhCCCCCCC
Confidence 99765321 123457888999997654321 46899999999999999999999853
No 349
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=99.97 E-value=7.9e-30 Score=265.39 Aligned_cols=194 Identities=24% Similarity=0.421 Sum_probs=162.4
Q ss_pred CccceeecCCcceEEEEEEcC-----CcEEEEEEeecccc--CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEE
Q 004248 537 SDANLIKNGHSGDLFRGILEG-----GIPVVIKRIDLQSV--KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVY 609 (766)
Q Consensus 537 ~~~~~ig~G~~g~Vy~~~~~~-----g~~vavK~l~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~ 609 (766)
+..+.||+|+||.||+|+... +..||+|.+..... ..+.+.+|++++++++||||+++++++.+ .+..++||
T Consensus 2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~~i~ 80 (258)
T smart00219 2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTE-EEPLMIVM 80 (258)
T ss_pred cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcC-CCeeEEEE
Confidence 456889999999999999543 48899999976544 35689999999999999999999998776 46899999
Q ss_pred eeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhh
Q 004248 610 KYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCA 689 (766)
Q Consensus 610 Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~ 689 (766)
||+++++|.+++..... ..+++.++..++.|++.||+|||+. +++||||||+||++++++.+|++|||+++.
T Consensus 81 e~~~~~~l~~~~~~~~~-----~~~~~~~~~~~~~ql~~~l~~lh~~---~~~h~dl~~~nil~~~~~~~~l~dfg~~~~ 152 (258)
T smart00219 81 EYMEGGDLLDYLRKNRP-----KELSLSDLLSFALQIARGMEYLESK---NFIHRDLAARNCLVGENLVVKISDFGLSRD 152 (258)
T ss_pred eccCCCCHHHHHHhhhh-----ccCCHHHHHHHHHHHHHHHHHHhcC---CeeecccccceEEEccCCeEEEcccCCcee
Confidence 99999999999975432 1289999999999999999999998 999999999999999999999999999976
Q ss_pred cCCCCc----cceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCC
Q 004248 690 QGGDAH----QSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLS 748 (766)
Q Consensus 690 ~~~~~~----~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~ 748 (766)
...... ...++..|++||...... ++.++||||+||++|||++ |+.||..
T Consensus 153 ~~~~~~~~~~~~~~~~~y~~Pe~~~~~~---------~~~~~Di~slG~i~~~l~~~g~~p~~~ 207 (258)
T smart00219 153 LYDDDYYKKKGGKLPIRWMAPESLKDGK---------FTSKSDVWSFGVLLWEIFTLGESPYPG 207 (258)
T ss_pred cccccccccccCCCcccccChHHhccCC---------CCcchhHHHHHHHHHHHHhCCCCCCCC
Confidence 533211 122567899999774332 4789999999999999999 7888753
No 350
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.97 E-value=4.4e-30 Score=275.44 Aligned_cols=198 Identities=23% Similarity=0.336 Sum_probs=162.7
Q ss_pred hCCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC---HHHHHHHHHHHhhcCCCCcccceeEEEecC------
Q 004248 533 TGDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK---TEAYLLELDFFSKVSHARLVPLLGHCMERE------ 602 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~---~~~~~~E~~~l~~l~H~niv~l~~~~~~~~------ 602 (766)
.++|+..++||+|+||.||+|+. .+++.||||++...... ...+.+|++++++++||||+++++++.+..
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 46899999999999999999995 56899999998654322 346789999999999999999999765432
Q ss_pred -CcEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEe
Q 004248 603 -NEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRL 681 (766)
Q Consensus 603 -~~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl 681 (766)
...++|+||+++ +|.+.+.... ..+++.++..++.|+++||+|||+. +|+||||||+||++++++.+||
T Consensus 87 ~~~~~lv~~~~~~-~l~~~~~~~~------~~~~~~~~~~i~~~l~~al~~lH~~---~i~H~dl~p~nil~~~~~~~~l 156 (311)
T cd07866 87 RGSVYMVTPYMDH-DLSGLLENPS------VKLTESQIKCYMLQLLEGINYLHEN---HILHRDIKAANILIDNQGILKI 156 (311)
T ss_pred CceEEEEEecCCc-CHHHHHhccc------cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEE
Confidence 247999999975 7877776432 2489999999999999999999997 9999999999999999999999
Q ss_pred ccchhhhhcCCCC--------------ccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCC
Q 004248 682 GSLSEVCAQGGDA--------------HQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNL 747 (766)
Q Consensus 682 ~DFG~a~~~~~~~--------------~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~ 747 (766)
+|||+++...... ....++..|+|||....... ++.++|||||||++|||++|++||.
T Consensus 157 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~--------~~~~~Dv~slG~il~el~~g~~~~~ 228 (311)
T cd07866 157 ADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERR--------YTTAVDIWGIGCVFAEMFTRRPILQ 228 (311)
T ss_pred CcCccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCc--------cCchhHhHHHHHHHHHHHhCCCCCC
Confidence 9999997642211 12345778999998654321 4789999999999999999999985
Q ss_pred C
Q 004248 748 S 748 (766)
Q Consensus 748 ~ 748 (766)
.
T Consensus 229 ~ 229 (311)
T cd07866 229 G 229 (311)
T ss_pred C
Confidence 4
No 351
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.96 E-value=3.5e-30 Score=286.53 Aligned_cols=211 Identities=18% Similarity=0.226 Sum_probs=182.3
Q ss_pred HHHHHHHhCCCCccceeecCCcceEEEEE-EcCCcEEEEEEeeccccCHHHHHHHHHHHhhc-CCCCcccceeEEEec--
Q 004248 526 YQQLLAATGDFSDANLIKNGHSGDLFRGI-LEGGIPVVIKRIDLQSVKTEAYLLELDFFSKV-SHARLVPLLGHCMER-- 601 (766)
Q Consensus 526 ~~~l~~~~~~~~~~~~ig~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~-- 601 (766)
++.+...++.|++.++||+|.+|.||+++ .++|+.+|||++.......++...|.++++.. .|||++.++|++...
T Consensus 11 ~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~ 90 (953)
T KOG0587|consen 11 LSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDP 90 (953)
T ss_pred hhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccccHHHHHHHHHHHhccCCCCcceEEEEEEEecC
Confidence 34444556778899999999999999999 78899999999988877788899999999988 699999999988642
Q ss_pred --CCcEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcE
Q 004248 602 --ENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEV 679 (766)
Q Consensus 602 --~~~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~ 679 (766)
++++|||||||.+|+.-|++..-.+ ..+.|+.+..|+.++++|+.+||.. .+||||||=.|||++.++.+
T Consensus 91 ~~~DqLWLVMEfC~gGSVTDLVKn~~g-----~rl~E~~IaYI~re~lrgl~HLH~n---kviHRDikG~NiLLT~e~~V 162 (953)
T KOG0587|consen 91 GNGDQLWLVMEFCGGGSVTDLVKNTKG-----NRLKEEWIAYILREILRGLAHLHNN---KVIHRDIKGQNVLLTENAEV 162 (953)
T ss_pred CCCCeEEEEeeccCCccHHHHHhhhcc-----cchhhHHHHHHHHHHHHHHHHHhhc---ceeeecccCceEEEeccCcE
Confidence 4689999999999999999975443 4699999999999999999999998 99999999999999999999
Q ss_pred EeccchhhhhcC---CCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 680 RLGSLSEVCAQG---GDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 680 kl~DFG~a~~~~---~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
|+.|||++...+ ....+.+||++|||||++.....-. ..|+.++|+||+|++..||.-|.+|+.+
T Consensus 163 KLvDFGvSaQldsT~grRnT~iGtP~WMAPEViac~e~~d----~tyd~R~D~WsLGITaIEladG~PPl~D 230 (953)
T KOG0587|consen 163 KLVDFGVSAQLDSTVGRRNTFIGTPYWMAPEVIACDESPD----ATYDYRSDLWSLGITAIEMAEGAPPLCD 230 (953)
T ss_pred EEeeeeeeeeeecccccccCcCCCcccccceeeecccCCC----CCcccccchhhccceeehhcCCCCCccC
Confidence 999999987664 2345678999999999987654322 2378899999999999999999999853
No 352
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=99.96 E-value=7.5e-30 Score=267.93 Aligned_cols=200 Identities=15% Similarity=0.208 Sum_probs=163.6
Q ss_pred CCCccceeecCCcceEEEEEEcC--CcEEEEEEeecccc-----------CHHHHHHHHHHHhh-cCCCCcccceeEEEe
Q 004248 535 DFSDANLIKNGHSGDLFRGILEG--GIPVVIKRIDLQSV-----------KTEAYLLELDFFSK-VSHARLVPLLGHCME 600 (766)
Q Consensus 535 ~~~~~~~ig~G~~g~Vy~~~~~~--g~~vavK~l~~~~~-----------~~~~~~~E~~~l~~-l~H~niv~l~~~~~~ 600 (766)
+|+..+.||+|+||.||+|.... ++.+|+|.+..... ..+++.+|+.++.+ ++||||+++++++.+
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 47778999999999999999654 78999998853211 13457789998875 799999999998876
Q ss_pred cCCcEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEE
Q 004248 601 RENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVR 680 (766)
Q Consensus 601 ~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~k 680 (766)
++..++||||+++++|.+++..... ....+++..++.++.|++.||.|||+. .+|+||||||+||++++++.+|
T Consensus 81 -~~~~~lv~e~~~~~~l~~~l~~~~~---~~~~~~~~~~~~~~~~l~~~l~~lh~~--~~i~H~dl~~~nil~~~~~~~~ 154 (269)
T cd08528 81 -NDRLYIVMDLIEGAPLGEHFNSLKE---KKQRFTEERIWNIFVQMVLALRYLHKE--KRIVHRDLTPNNIMLGEDDKVT 154 (269)
T ss_pred -CCeEEEEEecCCCCcHHHHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHhccC--CceeecCCCHHHEEECCCCcEE
Confidence 5689999999999999998854211 113589999999999999999999963 2799999999999999999999
Q ss_pred eccchhhhhcCCC--CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 681 LGSLSEVCAQGGD--AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 681 l~DFG~a~~~~~~--~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
|+|||.+...... .....++..|++||...... ++.++|||||||++|||++|+.||...
T Consensus 155 l~dfg~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~---------~~~~~Dv~slG~ll~~l~~g~~p~~~~ 216 (269)
T cd08528 155 ITDFGLAKQKQPESKLTSVVGTILYSCPEIVKNEP---------YGEKADVWAFGCILYQMCTLQPPFYST 216 (269)
T ss_pred EecccceeecccccccccccCcccCcChhhhcCCC---------CchHHHHHHHHHHHHHHHhCCCccccc
Confidence 9999999765322 23445778899999876543 478999999999999999999998543
No 353
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.96 E-value=9.3e-30 Score=265.82 Aligned_cols=189 Identities=15% Similarity=0.125 Sum_probs=155.9
Q ss_pred ceeecCCcceEEEEEE-cCCcEEEEEEeeccccC----HHHHHHHHHHH-hhcCCCCcccceeEEEecCCcEEEEEeeCC
Q 004248 540 NLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK----TEAYLLELDFF-SKVSHARLVPLLGHCMERENEKFLVYKYMP 613 (766)
Q Consensus 540 ~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~----~~~~~~E~~~l-~~l~H~niv~l~~~~~~~~~~~~lV~Ey~~ 613 (766)
+.||+|+||.||+|.. .+|+.||||.++..... ...+..|..++ ...+||||+++++++.. ++..|+|+||++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~-~~~~~lv~e~~~ 80 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQS-KDYLYLVMEYLN 80 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEc-CCeEEEEEeccC
Confidence 5689999999999985 56899999998654321 23455565554 44589999999997765 568999999999
Q ss_pred CCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcCCC
Q 004248 614 NGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGD 693 (766)
Q Consensus 614 ~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~~~ 693 (766)
+|+|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+||++++++.+||+|||+++....
T Consensus 81 ~~~L~~~l~~~~-------~~~~~~~~~i~~qi~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~- 149 (260)
T cd05611 81 GGDCASLIKTLG-------GLPEDWAKQYIAEVVLGVEDLHQR---GIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE- 149 (260)
T ss_pred CCCHHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEeecccceeccc-
Confidence 999999997543 388999999999999999999997 999999999999999999999999999876432
Q ss_pred CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 694 AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 694 ~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
.....++..|++||...... ++.++|||||||++|||+||+.||...
T Consensus 150 ~~~~~~~~~y~~pe~~~~~~---------~~~~~Dv~slG~il~~l~~g~~p~~~~ 196 (260)
T cd05611 150 NKKFVGTPDYLAPETILGVG---------DDKMSDWWSLGCVIFEFLFGYPPFHAE 196 (260)
T ss_pred cccCCCCcCccChhhhcCCC---------CcchhhhHHHHHHHHHHHHCCCCCCCC
Confidence 22335677899999876543 368999999999999999999999543
No 354
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=1.8e-31 Score=279.30 Aligned_cols=195 Identities=14% Similarity=0.135 Sum_probs=170.3
Q ss_pred CCCccceeecCCcceEEEEEEcC-CcEEEEEEeecccc----CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEE
Q 004248 535 DFSDANLIKNGHSGDLFRGILEG-GIPVVIKRIDLQSV----KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVY 609 (766)
Q Consensus 535 ~~~~~~~ig~G~~g~Vy~~~~~~-g~~vavK~l~~~~~----~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~ 609 (766)
+++.+..+|-|+||.|-...... ...+|+|.+++... +.+....|-.+|.+.+.|.||++|.-|.+ .+.+|+.|
T Consensus 421 dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd-~kyvYmLm 499 (732)
T KOG0614|consen 421 DLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRD-SKYVYMLM 499 (732)
T ss_pred hhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhcc-chhhhhhH
Confidence 44556789999999999888554 33589998876432 35678999999999999999999986655 56899999
Q ss_pred eeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhh
Q 004248 610 KYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCA 689 (766)
Q Consensus 610 Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~ 689 (766)
|-|-||+|+..|+.++. ++..+...|+..+.+|++|||++ +||.|||||+|.++|.+|.+||.|||+|+.
T Consensus 500 EaClGGElWTiLrdRg~-------Fdd~tarF~~acv~EAfeYLH~k---~iIYRDLKPENllLd~~Gy~KLVDFGFAKk 569 (732)
T KOG0614|consen 500 EACLGGELWTILRDRGS-------FDDYTARFYVACVLEAFEYLHRK---GIIYRDLKPENLLLDNRGYLKLVDFGFAKK 569 (732)
T ss_pred HhhcCchhhhhhhhcCC-------cccchhhhhHHHHHHHHHHHHhc---CceeccCChhheeeccCCceEEeehhhHHH
Confidence 99999999999987765 88888999999999999999998 999999999999999999999999999998
Q ss_pred c--CCCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 690 Q--GGDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 690 ~--~~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
+ +..+.+.+||+.|.|||++....+ +.++|.||+|+++||++||++||...
T Consensus 570 i~~g~KTwTFcGTpEYVAPEIILnKGH---------D~avDyWaLGIli~ELL~G~pPFs~~ 622 (732)
T KOG0614|consen 570 IGSGRKTWTFCGTPEYVAPEIILNKGH---------DRAVDYWALGILIYELLTGSPPFSGV 622 (732)
T ss_pred hccCCceeeecCCcccccchhhhccCc---------chhhHHHHHHHHHHHHHcCCCCCCCC
Confidence 7 456778999999999999887664 56889999999999999999999433
No 355
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=99.96 E-value=1.2e-29 Score=262.40 Aligned_cols=196 Identities=22% Similarity=0.278 Sum_probs=169.9
Q ss_pred CCCccceeecCCcceEEEEEEc-CCcEEEEEEeecccc-CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEeeC
Q 004248 535 DFSDANLIKNGHSGDLFRGILE-GGIPVVIKRIDLQSV-KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYM 612 (766)
Q Consensus 535 ~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey~ 612 (766)
+|+..+.||+|++|.||++... +++.||+|++..... ..+.+.+|++++++++||||+++++++.. ++..++++||+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~l~~e~~ 79 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLK-KDELWIVMEFC 79 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEec-CCeEEEEEecC
Confidence 4778899999999999999964 789999999976554 35689999999999999999999997765 56899999999
Q ss_pred CCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcCC
Q 004248 613 PNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGG 692 (766)
Q Consensus 613 ~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~~ 692 (766)
++++|.+++.... ..+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+|||.+.....
T Consensus 80 ~~~~L~~~~~~~~------~~~~~~~~~~i~~~i~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~ 150 (253)
T cd05122 80 SGGSLKDLLKSTN------QTLTESQIAYVCKELLKGLEYLHSN---GIIHRDIKAANILLTSDGEVKLIDFGLSAQLSD 150 (253)
T ss_pred CCCcHHHHHhhcC------CCCCHHHHHHHHHHHHHHHHHhhcC---CEecCCCCHHHEEEccCCeEEEeeccccccccc
Confidence 9999999987642 2489999999999999999999997 999999999999999999999999999877644
Q ss_pred CC--ccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 693 DA--HQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 693 ~~--~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
.. ....++..|++||...... .+.++||||||+++|||++|+.||...
T Consensus 151 ~~~~~~~~~~~~~~~PE~~~~~~---------~~~~~Dv~slG~il~~l~~g~~p~~~~ 200 (253)
T cd05122 151 TKARNTMVGTPYWMAPEVINGKP---------YDYKADIWSLGITAIELAEGKPPYSEL 200 (253)
T ss_pred cccccceecCCcccCHHHHcCCC---------CCccccHHHHHHHHHHHHhCCCCCCCC
Confidence 32 4456778899999875443 478999999999999999999998644
No 356
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.96 E-value=5.4e-30 Score=278.55 Aligned_cols=197 Identities=18% Similarity=0.251 Sum_probs=164.4
Q ss_pred hCCCCccceeecCCcceEEEEE-EcCCcEEEEEEeeccc---cCHHHHHHHHHHHhhcCCCCcccceeEEEecC----Cc
Q 004248 533 TGDFSDANLIKNGHSGDLFRGI-LEGGIPVVIKRIDLQS---VKTEAYLLELDFFSKVSHARLVPLLGHCMERE----NE 604 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~-~~~g~~vavK~l~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~----~~ 604 (766)
.++|...+.||+|+||.||+|+ ..+++.||||++.... ....++.+|+.++++++||||+++++++.... ..
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 3568889999999999999998 4678999999986532 12456788999999999999999999775422 34
Q ss_pred EEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccc
Q 004248 605 KFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684 (766)
Q Consensus 605 ~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DF 684 (766)
.|+||||+. ++|.+++...+ .+++.....++.|++.||+|||+. +++||||||+||+++.++.+||+||
T Consensus 84 ~~lv~e~~~-~~L~~~~~~~~-------~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dlkp~Nil~~~~~~~kL~Df 152 (337)
T cd07858 84 VYIVYELMD-TDLHQIIRSSQ-------TLSDDHCQYFLYQLLRGLKYIHSA---NVLHRDLKPSNLLLNANCDLKICDF 152 (337)
T ss_pred EEEEEeCCC-CCHHHHHhcCC-------CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECcC
Confidence 799999997 68998886543 389999999999999999999997 9999999999999999999999999
Q ss_pred hhhhhcCCC---CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 685 SEVCAQGGD---AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 685 G~a~~~~~~---~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
|+++..... .....++..|+|||....... ++.++|||||||++|||++|+.||..
T Consensus 153 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~--------~~~~~DiwslG~il~~l~~g~~pf~~ 211 (337)
T cd07858 153 GLARTTSEKGDFMTEYVVTRWYRAPELLLNCSE--------YTTAIDVWSVGCIFAELLGRKPLFPG 211 (337)
T ss_pred ccccccCCCcccccccccccCccChHHHhcCCC--------CCCcccHHHHHHHHHHHHcCCCCCCC
Confidence 999865322 233467889999997654321 46899999999999999999999854
No 357
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.96 E-value=9.7e-30 Score=269.08 Aligned_cols=195 Identities=19% Similarity=0.253 Sum_probs=164.0
Q ss_pred CCccceeecCCcceEEEEEEc-CCcEEEEEEeeccccC--HHHHHHHHHHHhhcC-CCCcccceeEEEecCCcEEEEEee
Q 004248 536 FSDANLIKNGHSGDLFRGILE-GGIPVVIKRIDLQSVK--TEAYLLELDFFSKVS-HARLVPLLGHCMERENEKFLVYKY 611 (766)
Q Consensus 536 ~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~--~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~~lV~Ey 611 (766)
|+..+.||+|++|+||+|+.. +++.||||++...... .....+|+..+++++ ||||+++++++.. ++..++||||
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~-~~~~~lv~e~ 79 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRE-NDELYFVFEY 79 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhc-CCcEEEEEec
Confidence 566789999999999999964 5889999998654332 334567999999999 9999999998766 6789999999
Q ss_pred CCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcC
Q 004248 612 MPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQG 691 (766)
Q Consensus 612 ~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~ 691 (766)
+ +|+|.+++..... ..++|.++..++.|++.||.|||+. +++|+||||+||++++++.+||+|||+++...
T Consensus 80 ~-~~~l~~~~~~~~~-----~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~ 150 (283)
T cd07830 80 M-EGNLYQLMKDRKG-----KPFSESVIRSIIYQILQGLAHIHKH---GFFHRDLKPENLLVSGPEVVKIADFGLAREIR 150 (283)
T ss_pred C-CCCHHHHHHhccc-----ccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCCEEEeecccceecc
Confidence 9 7899999876532 3489999999999999999999997 99999999999999999999999999997663
Q ss_pred C--CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 692 G--DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 692 ~--~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
. ......++..|+|||.+..... ++.++|||||||+++||+||+.||..
T Consensus 151 ~~~~~~~~~~~~~~~aPE~~~~~~~--------~~~~~Di~s~G~~l~el~~g~~~~~~ 201 (283)
T cd07830 151 SRPPYTDYVSTRWYRAPEILLRSTS--------YSSPVDIWALGCIMAELYTLRPLFPG 201 (283)
T ss_pred CCCCcCCCCCcccccCceeeecCcC--------cCCccchhhHHHHHHHHHhCCCccCC
Confidence 3 2234557889999998754321 47899999999999999999999843
No 358
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.96 E-value=8.5e-30 Score=271.24 Aligned_cols=189 Identities=17% Similarity=0.246 Sum_probs=160.9
Q ss_pred cceeecCCcceEEEEEE-cCCcEEEEEEeeccccC-HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEeeCCCCC
Q 004248 539 ANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK-TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGD 616 (766)
Q Consensus 539 ~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~-~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey~~~Gs 616 (766)
..+||+|+||.||+|.. .++..||||++...... .+.+.+|+.++++++||||+++++++.. .+..++||||+++++
T Consensus 25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e~~~~~~ 103 (292)
T cd06657 25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLV-GDELWVVMEFLEGGA 103 (292)
T ss_pred HHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEe-CCEEEEEEecCCCCc
Confidence 46799999999999985 57899999998654333 5578999999999999999999997765 568999999999999
Q ss_pred hhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcCCC---
Q 004248 617 LSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGD--- 693 (766)
Q Consensus 617 L~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~~~--- 693 (766)
|.+++... .+++.....++.|++.||+|||+. +|+||||||+||++++++.+||+|||++......
T Consensus 104 L~~~~~~~--------~~~~~~~~~~~~ql~~~l~~lH~~---givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~ 172 (292)
T cd06657 104 LTDIVTHT--------RMNEEQIAAVCLAVLKALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR 172 (292)
T ss_pred HHHHHhcC--------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEcccccceeccccccc
Confidence 99987532 378999999999999999999997 9999999999999999999999999988755322
Q ss_pred CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 694 AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 694 ~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
.....++..|++||...... ++.++||||+||++|||++|+.||..
T Consensus 173 ~~~~~~~~~y~~pE~~~~~~---------~~~~~Dv~slGvil~el~tg~~p~~~ 218 (292)
T cd06657 173 RKSLVGTPYWMAPELISRLP---------YGPEVDIWSLGIMVIEMVDGEPPYFN 218 (292)
T ss_pred ccccccCccccCHHHhcCCC---------CCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 12235678899999875433 46799999999999999999999854
No 359
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.96 E-value=1e-29 Score=271.16 Aligned_cols=199 Identities=18% Similarity=0.224 Sum_probs=162.4
Q ss_pred CCCCccceeecCCcceEEEEEEc-CCcEEEEEEeecccc--CHHHHHHHHHHHhhcC-CCCcccceeEEEecCCcEEEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGILE-GGIPVVIKRIDLQSV--KTEAYLLELDFFSKVS-HARLVPLLGHCMERENEKFLVY 609 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~~lV~ 609 (766)
++|+..+.||+|+||.||+|+.. +++.||||.++.... ...++.+|++++.+.. ||||++++++|.+ +...|+||
T Consensus 15 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~-~~~~~~v~ 93 (296)
T cd06618 15 NDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFIT-DSDVFICM 93 (296)
T ss_pred chheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeec-CCeEEEEe
Confidence 56788899999999999999965 489999999975432 2456778888777775 9999999998876 56899999
Q ss_pred eeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhh
Q 004248 610 KYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCA 689 (766)
Q Consensus 610 Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~ 689 (766)
||++ +++.+++.... ..+++..+..++.|++.||+|||+. .+|+||||||+||++++++.+||+|||++..
T Consensus 94 e~~~-~~l~~l~~~~~------~~l~~~~~~~i~~~i~~~l~~lH~~--~~i~H~dl~p~nill~~~~~~kL~dfg~~~~ 164 (296)
T cd06618 94 ELMS-TCLDKLLKRIQ------GPIPEDILGKMTVAIVKALHYLKEK--HGVIHRDVKPSNILLDASGNVKLCDFGISGR 164 (296)
T ss_pred eccC-cCHHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHhh--CCEecCCCcHHHEEEcCCCCEEECccccchh
Confidence 9996 47877765432 2489999999999999999999963 2899999999999999999999999999876
Q ss_pred cCCC--CccceeeecccCCCCCCCCc-eeeeeeeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 690 QGGD--AHQSRITRLLRLPQSSEQGS-SGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 690 ~~~~--~~~~~~t~~y~aPe~~~~~~-~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
.... .....++..|+|||.+.... .+. ++.++|||||||++|||++|+.||..
T Consensus 165 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~------~~~~~Di~slG~il~el~~g~~p~~~ 220 (296)
T cd06618 165 LVDSKAKTRSAGCAAYMAPERIDPPDPNPK------YDIRADVWSLGISLVELATGQFPYKN 220 (296)
T ss_pred ccCCCcccCCCCCccccCHhhcCCCCCccc------cccchhHHHHHHHHHHHHhCCCCCCc
Confidence 5322 22234567899999876543 111 57899999999999999999999954
No 360
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.96 E-value=4.1e-31 Score=251.60 Aligned_cols=208 Identities=18% Similarity=0.225 Sum_probs=175.8
Q ss_pred hCCCCccceeecCCcceEEEEE-EcCCcEEEEEEeeccccCHHHHHHHHHHHhhcC-CCCcccceeEEEecC-CcEEEEE
Q 004248 533 TGDFSDANLIKNGHSGDLFRGI-LEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVS-HARLVPLLGHCMERE-NEKFLVY 609 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~-~~~~lV~ 609 (766)
.++|+..+++|+|.|++||.|. ..+.++++||.++.- +.+.+.||++||..++ |||||++++...+.. ....||+
T Consensus 37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV--kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLiF 114 (338)
T KOG0668|consen 37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPV--KKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLIF 114 (338)
T ss_pred cchHHHHHHHcCccHhhHhcccccCCCceEEEeeechH--HHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhHh
Confidence 4678889999999999999998 677889999998643 3567899999999997 999999999876543 3478999
Q ss_pred eeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCC-CCcEEeccchhhh
Q 004248 610 KYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDD-KFEVRLGSLSEVC 688 (766)
Q Consensus 610 Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~-~~~~kl~DFG~a~ 688 (766)
||+.+-|...+.. .++..++..++.++++||.|+|+. +|+|||+||.|++||. .-..+++|+|+|.
T Consensus 115 E~v~n~Dfk~ly~----------tl~d~dIryY~~elLkALdyCHS~---GImHRDVKPhNvmIdh~~rkLrlIDWGLAE 181 (338)
T KOG0668|consen 115 EYVNNTDFKQLYP----------TLTDYDIRYYIYELLKALDYCHSM---GIMHRDVKPHNVMIDHELRKLRLIDWGLAE 181 (338)
T ss_pred hhhccccHHHHhh----------hhchhhHHHHHHHHHHHHhHHHhc---CcccccCCcceeeechhhceeeeeecchHh
Confidence 9999988776552 377778899999999999999998 9999999999999995 4679999999998
Q ss_pred hcC--CCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCCccccccceeeEEEE
Q 004248 689 AQG--GDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSSRFGVKQQTTIIKLC 763 (766)
Q Consensus 689 ~~~--~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~ 763 (766)
... .+....+.+++|.-||.+..... ++..-|+|||||++.+|+..|.||+.+..+.+|+..|.|++
T Consensus 182 FYHp~~eYnVRVASRyfKGPELLVdy~~--------YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVL 250 (338)
T KOG0668|consen 182 FYHPGKEYNVRVASRYFKGPELLVDYQM--------YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVL 250 (338)
T ss_pred hcCCCceeeeeeehhhcCCchheeechh--------ccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHh
Confidence 763 33455677899999998754322 56678999999999999999999999999988888877654
No 361
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.96 E-value=1.2e-30 Score=281.91 Aligned_cols=191 Identities=20% Similarity=0.319 Sum_probs=161.1
Q ss_pred ccceeecCCcceEEEEEEc--CC--cEEEEEEeeccccC--HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEee
Q 004248 538 DANLIKNGHSGDLFRGILE--GG--IPVVIKRIDLQSVK--TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKY 611 (766)
Q Consensus 538 ~~~~ig~G~~g~Vy~~~~~--~g--~~vavK~l~~~~~~--~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey 611 (766)
..++||+|.||+|++|.|. .| ..||||.++..... ..+|++|+.+|.+|+|||+|+|||+..+ ....+|+|.
T Consensus 114 l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~--qp~mMV~EL 191 (1039)
T KOG0199|consen 114 LYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD--QPAMMVFEL 191 (1039)
T ss_pred HHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc--chhhHHhhh
Confidence 3578999999999999964 34 47999999766544 5689999999999999999999998875 578999999
Q ss_pred CCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcC
Q 004248 612 MPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQG 691 (766)
Q Consensus 612 ~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~ 691 (766)
++.|+|.+.|++... ..|-......|+.|||.||.||..+ +.|||||.++|+|+-..-.+||+|||+.+.++
T Consensus 192 aplGSLldrLrka~~-----~~llv~~Lcdya~QiA~aM~YLesk---rlvHRDLAARNlllasprtVKI~DFGLmRaLg 263 (1039)
T KOG0199|consen 192 APLGSLLDRLRKAKK-----AILLVSRLCDYAMQIAKAMQYLESK---RLVHRDLAARNLLLASPRTVKICDFGLMRALG 263 (1039)
T ss_pred cccchHHHHHhhccc-----cceeHHHHHHHHHHHHHHHHHHhhh---hhhhhhhhhhhheecccceeeeecccceeccC
Confidence 999999999987322 3477888899999999999999998 99999999999999999999999999999875
Q ss_pred CCCccce------eeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCC
Q 004248 692 GDAHQSR------ITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNL 747 (766)
Q Consensus 692 ~~~~~~~------~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~ 747 (766)
.....+. .-..|.|||.+.... ++.++|||+|||++|||+| |..|+.
T Consensus 264 ~ned~Yvm~p~rkvPfAWCaPEsLrh~k---------FShaSDvWmyGVTiWEMFtyGEePW~ 317 (1039)
T KOG0199|consen 264 ENEDMYVMAPQRKVPFAWCAPESLRHRK---------FSHASDVWMYGVTIWEMFTYGEEPWV 317 (1039)
T ss_pred CCCcceEecCCCcCcccccCHhHhcccc---------ccccchhhhhhhhHHhhhccCCCCCC
Confidence 4332222 233678899876554 6889999999999999998 788984
No 362
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.96 E-value=1.2e-29 Score=275.56 Aligned_cols=196 Identities=19% Similarity=0.231 Sum_probs=160.5
Q ss_pred CCCC-ccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC---------------HHHHHHHHHHHhhcCCCCccccee
Q 004248 534 GDFS-DANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK---------------TEAYLLELDFFSKVSHARLVPLLG 596 (766)
Q Consensus 534 ~~~~-~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~---------------~~~~~~E~~~l~~l~H~niv~l~~ 596 (766)
++|. ..+.||+|+||.||+|.. .+++.||||++...... ...+.+|++++++++||||+++++
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 87 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD 87 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence 3454 347799999999999995 57899999998643221 124789999999999999999999
Q ss_pred EEEecCCcEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCC
Q 004248 597 HCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDK 676 (766)
Q Consensus 597 ~~~~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~ 676 (766)
++.. ++..++||||++ |+|.+++.... .+++.....++.|++.||+|||+. +|+||||||+||+++.+
T Consensus 88 ~~~~-~~~~~lv~e~~~-~~l~~~l~~~~-------~~~~~~~~~~~~ql~~aL~~LH~~---~i~H~dl~~~nill~~~ 155 (335)
T PTZ00024 88 VYVE-GDFINLVMDIMA-SDLKKVVDRKI-------RLTESQVKCILLQILNGLNVLHKW---YFMHRDLSPANIFINSK 155 (335)
T ss_pred EEec-CCcEEEEEeccc-cCHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHeEECCC
Confidence 8765 568999999997 69999986543 388999999999999999999987 99999999999999999
Q ss_pred CcEEeccchhhhhcCC-----------------CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHH
Q 004248 677 FEVRLGSLSEVCAQGG-----------------DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSA 739 (766)
Q Consensus 677 ~~~kl~DFG~a~~~~~-----------------~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~el 739 (766)
+.+|++|||.++.... ......++..|+|||...+... ++.++||||+||++|||
T Consensus 156 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~--------~~~~~Dv~slG~~l~el 227 (335)
T PTZ00024 156 GICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEK--------YHFAVDMWSVGCIFAEL 227 (335)
T ss_pred CCEEECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCC--------CCcHHHHHHHHHHHHHH
Confidence 9999999999875431 1112345778999998754321 46899999999999999
Q ss_pred hcCCCCCCCC
Q 004248 740 IFNNHLNLSS 749 (766)
Q Consensus 740 ltG~~p~~~~ 749 (766)
+||+.||...
T Consensus 228 ~tg~~p~~~~ 237 (335)
T PTZ00024 228 LTGKPLFPGE 237 (335)
T ss_pred HhCCCCCCCC
Confidence 9999998543
No 363
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.96 E-value=1.6e-29 Score=273.87 Aligned_cols=194 Identities=20% Similarity=0.179 Sum_probs=158.2
Q ss_pred ceeecC--CcceEEEEEE-cCCcEEEEEEeeccccC---HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEeeCC
Q 004248 540 NLIKNG--HSGDLFRGIL-EGGIPVVIKRIDLQSVK---TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMP 613 (766)
Q Consensus 540 ~~ig~G--~~g~Vy~~~~-~~g~~vavK~l~~~~~~---~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey~~ 613 (766)
..||+| +||+||+|+. .+|+.||||.+...... .+.+.+|+.+++.++||||+++++++.. ++..++||||++
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~-~~~~~~v~e~~~ 82 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTT-GSWLWVISPFMA 82 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEec-CCceEEEEeccc
Confidence 456766 8999999995 57999999998754332 4578899999999999999999998765 567899999999
Q ss_pred CCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcCC-
Q 004248 614 NGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGG- 692 (766)
Q Consensus 614 ~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~~- 692 (766)
+|+|.+++.+... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+|++||+.+.....
T Consensus 83 ~~~l~~~l~~~~~-----~~~~~~~~~~~~~qi~~aL~~lH~~---~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~ 154 (328)
T cd08226 83 YGSANSLLKTYFP-----EGMSEALIGNILFGALRGLNYLHQN---GYIHRNIKASHILISGDGLVSLSGLSHLYSLVRN 154 (328)
T ss_pred CCCHHHHHHhhcc-----cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEeCCCcEEEechHHHhhhhcc
Confidence 9999999876432 2489999999999999999999987 999999999999999999999999986543211
Q ss_pred --C-------CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 693 --D-------AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 693 --~-------~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
. .....++..|++||.......+ ++.++|||||||++|||++|+.||...
T Consensus 155 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-------~~~~~DiwslG~~l~el~~g~~p~~~~ 213 (328)
T cd08226 155 GQKAKVVYDFPQFSTSVLPWLSPELLRQDLYG-------YNVKSDIYSVGITACELATGRVPFQDM 213 (328)
T ss_pred CccccccccccccccCccCccChhhhcCCCCC-------CCchhhHHHHHHHHHHHHhCCCCCCCc
Confidence 0 0111234569999987654332 478999999999999999999999543
No 364
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.96 E-value=1.2e-29 Score=265.03 Aligned_cols=188 Identities=22% Similarity=0.218 Sum_probs=159.8
Q ss_pred eecCCcceEEEEEEc-CCcEEEEEEeecccc----CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEeeCCCCC
Q 004248 542 IKNGHSGDLFRGILE-GGIPVVIKRIDLQSV----KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGD 616 (766)
Q Consensus 542 ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~----~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey~~~Gs 616 (766)
||+|+||.||+|+.. +|+.||+|.+..... ..+.+.+|++++++++||||+++++.+.. ++..|+||||+++|+
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~~lv~e~~~~~~ 79 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQG-KKNLYLVMEYLPGGD 79 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheec-CcEEEEEEecCCCCc
Confidence 689999999999965 599999999865433 24578999999999999999999986654 568999999999999
Q ss_pred hhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcCCC---
Q 004248 617 LSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGD--- 693 (766)
Q Consensus 617 L~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~~~--- 693 (766)
|.+++.+.. .+++..+..++.|++.||+|||+. +++||||+|+||++++++.+||+|||++......
T Consensus 80 L~~~l~~~~-------~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~ 149 (265)
T cd05579 80 LASLLENVG-------SLDEDVARIYIAEIVLALEYLHSN---GIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQI 149 (265)
T ss_pred HHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHHc---CeecCCCCHHHeEEcCCCCEEEEecccchhcccCccc
Confidence 999997543 389999999999999999999987 9999999999999999999999999998764221
Q ss_pred --------CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 694 --------AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 694 --------~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
.....++..|++||...... .+.++|||||||++||++||+.||...
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~Pe~~~~~~---------~~~~~Dv~slG~~~~~l~~g~~p~~~~ 204 (265)
T cd05579 150 NLNDDEKEDKRIVGTPDYIAPEVILGQG---------HSKTVDWWSLGCILYEFLVGIPPFHGE 204 (265)
T ss_pred ccccccccccCcccCccccCHHHhcCCC---------CCcchhhHHHHHHHHHHHhCCCCCCCC
Confidence 12234677899999875443 367999999999999999999998544
No 365
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.96 E-value=3.8e-29 Score=269.00 Aligned_cols=197 Identities=20% Similarity=0.287 Sum_probs=163.1
Q ss_pred CCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC----HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEe
Q 004248 536 FSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK----TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYK 610 (766)
Q Consensus 536 ~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~----~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~E 610 (766)
|...+.||+|+||+||+|+. .+|+.||+|++...... .+.+.+|++++++++|||++++++++.+ .+..|+|||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e 101 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLK-EHTAWLVME 101 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEe-CCEEEEEEe
Confidence 55567899999999999985 56899999998654322 3468899999999999999999998876 567999999
Q ss_pred eCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhc
Q 004248 611 YMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQ 690 (766)
Q Consensus 611 y~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~ 690 (766)
|+. |++.+++.... ..++|.++..++.|++.|++|||+. +|+||||||+||++++++.+||+|||++...
T Consensus 102 ~~~-~~l~~~l~~~~------~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dl~p~nili~~~~~~kL~dfg~~~~~ 171 (313)
T cd06633 102 YCL-GSASDLLEVHK------KPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASKS 171 (313)
T ss_pred cCC-CCHHHHHHhcC------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChhhEEECCCCCEEEeecCCCccc
Confidence 996 58888876433 2489999999999999999999987 9999999999999999999999999998654
Q ss_pred CCCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCCc
Q 004248 691 GGDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSSR 750 (766)
Q Consensus 691 ~~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~~ 750 (766)
.. .....++..|+|||.+.....+. ++.++|||||||++|||++|+.||...+
T Consensus 172 ~~-~~~~~~~~~y~aPE~~~~~~~~~------~~~~sDv~slGvil~el~~g~~p~~~~~ 224 (313)
T cd06633 172 SP-ANSFVGTPYWMAPEVILAMDEGQ------YDGKVDVWSLGITCIELAERKPPLFNMN 224 (313)
T ss_pred CC-CCCccccccccChhhccccCCCC------CCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 22 23346788899999874322122 5789999999999999999999986543
No 366
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.96 E-value=2.3e-29 Score=261.43 Aligned_cols=197 Identities=22% Similarity=0.278 Sum_probs=169.2
Q ss_pred CCCccceeecCCcceEEEEEEc-CCcEEEEEEeecccc---CHHHHHHHHHHHhhcCCCCcccceeEEEecC-CcEEEEE
Q 004248 535 DFSDANLIKNGHSGDLFRGILE-GGIPVVIKRIDLQSV---KTEAYLLELDFFSKVSHARLVPLLGHCMERE-NEKFLVY 609 (766)
Q Consensus 535 ~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~---~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~~~lV~ 609 (766)
+|+..+.||+|++|.||+|... +++.|++|++..... ..+.+.+|++++++++||||+++++.+.... +..++|+
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 80 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL 80 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence 4777899999999999999965 789999999876543 3567999999999999999999999776531 5789999
Q ss_pred eeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhh
Q 004248 610 KYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCA 689 (766)
Q Consensus 610 Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~ 689 (766)
||+++++|.+++.... .++|.++..++.|+++||+|||+. +++||||+|+||+++.++.+||+|||.+..
T Consensus 81 e~~~~~~L~~~~~~~~-------~~~~~~~~~~~~~l~~~l~~lh~~---~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~ 150 (260)
T cd06606 81 EYVSGGSLSSLLKKFG-------KLPEPVIRKYTRQILEGLAYLHSN---GIVHRDIKGANILVDSDGVVKLADFGCAKR 150 (260)
T ss_pred EecCCCcHHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEcccccEEe
Confidence 9999999999997543 489999999999999999999997 999999999999999999999999999877
Q ss_pred cCCC-----CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCCc
Q 004248 690 QGGD-----AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSSR 750 (766)
Q Consensus 690 ~~~~-----~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~~ 750 (766)
.... .....++..|.+||...... .+.++|||||||++|||++|+.||...+
T Consensus 151 ~~~~~~~~~~~~~~~~~~y~~pE~~~~~~---------~~~~~Dv~slG~il~~l~~g~~p~~~~~ 207 (260)
T cd06606 151 LGDIETGEGTGSVRGTPYWMAPEVIRGEE---------YGRAADIWSLGCTVIEMATGKPPWSELG 207 (260)
T ss_pred cccccccccccCCCCCccccCHhhhcCCC---------CCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 6433 23345778899999875543 4789999999999999999999996543
No 367
>PHA02882 putative serine/threonine kinase; Provisional
Probab=99.96 E-value=1.3e-29 Score=270.09 Aligned_cols=196 Identities=11% Similarity=0.028 Sum_probs=148.5
Q ss_pred CCCCccceeecCCcceEEEEEEcC----CcEEEEEEeeccccC--H----------HHHHHHHHHHhhcCCCCcccceeE
Q 004248 534 GDFSDANLIKNGHSGDLFRGILEG----GIPVVIKRIDLQSVK--T----------EAYLLELDFFSKVSHARLVPLLGH 597 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~~~----g~~vavK~l~~~~~~--~----------~~~~~E~~~l~~l~H~niv~l~~~ 597 (766)
+.|...++||+|+||.||+|...+ +..+|+|........ . .....+...+..+.|+||++++++
T Consensus 12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~ 91 (294)
T PHA02882 12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC 91 (294)
T ss_pred CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence 568889999999999999999543 456666654322211 1 112334455667799999999986
Q ss_pred EEecCC---cEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeC
Q 004248 598 CMEREN---EKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLD 674 (766)
Q Consensus 598 ~~~~~~---~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~ 674 (766)
+..... ..++++|++.. ++.+.+.... ..++..+..++.|+++||+|||+. +|+||||||+|||++
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-------~~~~~~~~~i~~qi~~~l~~lH~~---~iiHrDiKp~Nill~ 160 (294)
T PHA02882 92 GSFKRCRMYYRFILLEKLVE-NTKEIFKRIK-------CKNKKLIKNIMKDMLTTLEYIHEH---GISHGDIKPENIMVD 160 (294)
T ss_pred eeEecCCceEEEEEEehhcc-CHHHHHHhhc-------cCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEc
Confidence 654222 34778887753 6666664332 257888899999999999999997 999999999999999
Q ss_pred CCCcEEeccchhhhhcCC----------CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCC
Q 004248 675 DKFEVRLGSLSEVCAQGG----------DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNH 744 (766)
Q Consensus 675 ~~~~~kl~DFG~a~~~~~----------~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~ 744 (766)
.++.+||+|||+|+.... ......+|+.|+|||...+.. ++.++|||||||++|||+||+.
T Consensus 161 ~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~---------~~~~~DiwSlG~~l~el~~g~~ 231 (294)
T PHA02882 161 GNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGAC---------VTRRGDLESLGYCMLKWAGIKL 231 (294)
T ss_pred CCCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCC---------CCcHHHHHHHHHHHHHHHhCCC
Confidence 999999999999976521 112235899999999875544 4789999999999999999999
Q ss_pred CCCCC
Q 004248 745 LNLSS 749 (766)
Q Consensus 745 p~~~~ 749 (766)
||...
T Consensus 232 P~~~~ 236 (294)
T PHA02882 232 PWKGF 236 (294)
T ss_pred CCCcc
Confidence 99544
No 368
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.96 E-value=1.5e-29 Score=272.14 Aligned_cols=191 Identities=20% Similarity=0.173 Sum_probs=153.6
Q ss_pred eecCCcceEEEEEEcCCcEEEEEEeeccc---cCHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEeeCCCCChh
Q 004248 542 IKNGHSGDLFRGILEGGIPVVIKRIDLQS---VKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLS 618 (766)
Q Consensus 542 ig~G~~g~Vy~~~~~~g~~vavK~l~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey~~~GsL~ 618 (766)
+|.|+++.||++. .+++.||||++.... ...+.+.+|++++++++||||+++++++.+ .+..+++|||+++|+|.
T Consensus 10 ~~~~~~v~~~~~~-~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~-~~~~~~~~e~~~~~~l~ 87 (314)
T cd08216 10 FEDLMIVHLAKHK-PTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIV-DSELYVVSPLMAYGSCE 87 (314)
T ss_pred hcCCceEEEEEec-CCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeec-CCeEEEEEeccCCCCHH
Confidence 3444444444444 378999999997542 224679999999999999999999997765 56799999999999999
Q ss_pred hhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcCC------
Q 004248 619 SSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGG------ 692 (766)
Q Consensus 619 ~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~~------ 692 (766)
+++.+... ..+++.....++.|++.||+|||+. +|+||||||+||+++.++.+|++|||.+.....
T Consensus 88 ~~l~~~~~-----~~~~~~~~~~~~~~l~~~L~~LH~~---~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~ 159 (314)
T cd08216 88 DLLKTHFP-----EGLPELAIAFILKDVLNALDYIHSK---GFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQR 159 (314)
T ss_pred HHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCcceEEEecCCceEEecCccceeecccccccc
Confidence 99975432 2488999999999999999999998 999999999999999999999999998864421
Q ss_pred ----CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 693 ----DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 693 ----~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
......++..|+|||.+.....+ ++.++|||||||++|||++|+.||...
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~-------~~~~~Diws~G~il~el~~g~~pf~~~ 213 (314)
T cd08216 160 VVHDFPKSSVKNLPWLSPEVLQQNLQG-------YNEKSDIYSVGITACELANGHVPFKDM 213 (314)
T ss_pred ccccccccccccccccCHHHhcCCCCC-------CCcchhHHHHHHHHHHHHhCCCCCCCC
Confidence 11223457789999987654322 478999999999999999999999643
No 369
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=99.96 E-value=3.4e-29 Score=259.95 Aligned_cols=195 Identities=21% Similarity=0.326 Sum_probs=167.2
Q ss_pred CCCccceeecCCcceEEEEEE-cCCcEEEEEEeecccc---CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEe
Q 004248 535 DFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV---KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYK 610 (766)
Q Consensus 535 ~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~E 610 (766)
+|+..+.||+|++|.||+|+. .+++.||+|.+..... ..+.+.+|++++++++|||++++++++.. ++..++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~~v~e 79 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIET-SDSLYIILE 79 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEe-CCEEEEEEe
Confidence 477789999999999999985 4688999999976543 24679999999999999999999997765 568999999
Q ss_pred eCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhc
Q 004248 611 YMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQ 690 (766)
Q Consensus 611 y~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~ 690 (766)
|+++++|.+++.... .+++..+..++.|++.|+.|||+. +|+||||||+||+++.++.+||+|||.+...
T Consensus 80 ~~~~~~L~~~~~~~~-------~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~ 149 (254)
T cd06627 80 YAENGSLRQIIKKFG-------PFPESLVAVYVYQVLQGLAYLHEQ---GVIHRDIKAANILTTKDGVVKLADFGVATKL 149 (254)
T ss_pred cCCCCcHHHHHHhcc-------CCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEECCCCCEEEeccccceec
Confidence 999999999987543 389999999999999999999987 9999999999999999999999999999866
Q ss_pred CCCC---ccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 691 GGDA---HQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 691 ~~~~---~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
.... ....++..|++||...... .+.++||||+|+++|||++|+.||...
T Consensus 150 ~~~~~~~~~~~~~~~y~~pe~~~~~~---------~~~~~Dv~~lG~~l~~l~~g~~p~~~~ 202 (254)
T cd06627 150 NDVSKDDASVVGTPYWMAPEVIEMSG---------ASTASDIWSLGCTVIELLTGNPPYYDL 202 (254)
T ss_pred CCCcccccccccchhhcCHhhhcCCC---------CCcchhHHHHHHHHHHHHhCCCCCCCc
Confidence 4322 2345678899999865433 367999999999999999999998543
No 370
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.96 E-value=1.8e-29 Score=262.63 Aligned_cols=200 Identities=21% Similarity=0.271 Sum_probs=168.2
Q ss_pred CCCccceeecCCcceEEEEE-EcCCcEEEEEEeecccc---CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEe
Q 004248 535 DFSDANLIKNGHSGDLFRGI-LEGGIPVVIKRIDLQSV---KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYK 610 (766)
Q Consensus 535 ~~~~~~~ig~G~~g~Vy~~~-~~~g~~vavK~l~~~~~---~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~E 610 (766)
+|+..+.||+|+||.||+++ ..+++.+|+|++..... ...++.+|++++++++||||+++++++.. ....++|||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~~v~e 79 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLD-GNKLCIVME 79 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhcc-CCEEEEEeh
Confidence 47788999999999999998 45788999999875432 24578899999999999999999997765 468999999
Q ss_pred eCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhc
Q 004248 611 YMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQ 690 (766)
Q Consensus 611 y~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~ 690 (766)
|+++++|.+++.+... ....+++..+..++.|++.||+|||+. +++||||||+||++++++.+|++|||+++..
T Consensus 80 ~~~~~~L~~~~~~~~~---~~~~~~~~~~~~~~~~l~~al~~lh~~---~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~ 153 (256)
T cd08530 80 YAPFGDLSKAISKRKK---KRKLIPEQEIWRIFIQLLRGLQALHEQ---KILHRDLKSANILLVANDLVKIGDLGISKVL 153 (256)
T ss_pred hcCCCCHHHHHHHHHh---hcCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEEecCCcEEEeeccchhhh
Confidence 9999999999876321 123589999999999999999999987 9999999999999999999999999999876
Q ss_pred CCC-CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCCc
Q 004248 691 GGD-AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSSR 750 (766)
Q Consensus 691 ~~~-~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~~ 750 (766)
... .....++..|++||...... ++.++|+||+|+++|||++|+.||...+
T Consensus 154 ~~~~~~~~~~~~~~~~Pe~~~~~~---------~~~~~D~~slG~~~~~l~~g~~p~~~~~ 205 (256)
T cd08530 154 KKNMAKTQIGTPHYMAPEVWKGRP---------YSYKSDIWSLGCLLYEMATFAPPFEARS 205 (256)
T ss_pred ccCCcccccCCccccCHHHHCCCC---------CCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 433 22345678899999875433 4678999999999999999999995443
No 371
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.96 E-value=4.4e-29 Score=264.35 Aligned_cols=195 Identities=19% Similarity=0.256 Sum_probs=160.3
Q ss_pred CCccceeecCCcceEEEEEEc-CCcEEEEEEeeccccC---HHHHHHHHHHHhhc---CCCCcccceeEEEecCC----c
Q 004248 536 FSDANLIKNGHSGDLFRGILE-GGIPVVIKRIDLQSVK---TEAYLLELDFFSKV---SHARLVPLLGHCMEREN----E 604 (766)
Q Consensus 536 ~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~---~~~~~~E~~~l~~l---~H~niv~l~~~~~~~~~----~ 604 (766)
|+..+.||+|+||.||+|+.. +++.||+|+++..... ...+.+|+++++++ +||||+++++++...+. .
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 567889999999999999965 5899999999643222 34677888877766 59999999998876321 2
Q ss_pred EEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccc
Q 004248 605 KFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684 (766)
Q Consensus 605 ~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DF 684 (766)
.+++|||++ ++|.+++.+... ..++|.++..++.|+++||+|||+. +++||||||+||++++++.+||+||
T Consensus 81 ~~l~~e~~~-~~l~~~l~~~~~-----~~l~~~~~~~~~~~i~~al~~LH~~---~i~h~~l~~~nili~~~~~~~l~df 151 (287)
T cd07838 81 LTLVFEHVD-QDLATYLSKCPK-----PGLPPETIKDLMRQLLRGVDFLHSH---RIVHRDLKPQNILVTSDGQVKIADF 151 (287)
T ss_pred eEEEehhcc-cCHHHHHHHccC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhEEEccCCCEEEecc
Confidence 899999998 489998875432 2489999999999999999999997 8999999999999999999999999
Q ss_pred hhhhhcCCC--CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 685 SEVCAQGGD--AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 685 G~a~~~~~~--~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
|++...... .....++..|+|||...... ++.++|||||||++|||+||+.||..
T Consensus 152 g~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~---------~~~~~Di~s~G~~l~~l~~~~~~~~~ 208 (287)
T cd07838 152 GLARIYSFEMALTSVVVTLWYRAPEVLLQSS---------YATPVDMWSVGCIFAELFRRRPLFRG 208 (287)
T ss_pred CcceeccCCcccccccccccccChHHhccCC---------CCCcchhhhHHHHHHHHHhCCCcccC
Confidence 998775322 22345678899999875443 46799999999999999999988854
No 372
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.96 E-value=1.7e-29 Score=273.71 Aligned_cols=196 Identities=20% Similarity=0.265 Sum_probs=166.1
Q ss_pred CCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccc---cCHHHHHHHHHHHhhcCCCCcccceeEEEecC----CcEE
Q 004248 535 DFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQS---VKTEAYLLELDFFSKVSHARLVPLLGHCMERE----NEKF 606 (766)
Q Consensus 535 ~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~----~~~~ 606 (766)
+|+..+.||+|+||.||+|+. .+++.||||++.... ...+.+.+|++++++++||||+++++++.... ...|
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 477889999999999999995 458999999986543 22567999999999999999999999876532 3689
Q ss_pred EEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchh
Q 004248 607 LVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSE 686 (766)
Q Consensus 607 lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~ 686 (766)
+||||++ ++|.+++.+.. .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 81 lv~e~~~-~~l~~~l~~~~-------~l~~~~~~~i~~~l~~~l~~LH~~---gi~H~dlkp~nili~~~~~~~L~dfg~ 149 (330)
T cd07834 81 IVTELME-TDLHKVIKSPQ-------PLTDDHIQYFLYQILRGLKYLHSA---NVIHRDLKPSNILVNSNCDLKICDFGL 149 (330)
T ss_pred EEecchh-hhHHHHHhCCC-------CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccCc
Confidence 9999998 58999886543 489999999999999999999997 999999999999999999999999999
Q ss_pred hhhcCCC------CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 687 VCAQGGD------AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 687 a~~~~~~------~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
+...... .....++..|+|||.+..... ++.++|||||||++|||++|+.||...
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~--------~~~~sDi~slG~il~~l~~g~~pf~~~ 210 (330)
T cd07834 150 ARGVDPDEDEKGFLTEYVVTRWYRAPELLLSSSR--------YTKAIDIWSVGCIFAELLTRKPLFPGR 210 (330)
T ss_pred eEeecccccccccccccccccCcCCceeeecccC--------CCcchhHHHHHHHHHHHHcCCCCcCCC
Confidence 9865322 234467889999998765421 578999999999999999999999544
No 373
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.96 E-value=2.8e-29 Score=269.44 Aligned_cols=195 Identities=23% Similarity=0.301 Sum_probs=161.8
Q ss_pred CCccceeecCCcceEEEEEE-cCCcEEEEEEeecccc----CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEe
Q 004248 536 FSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV----KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYK 610 (766)
Q Consensus 536 ~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~----~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~E 610 (766)
|+..+.||+|+||.||+|+. .++..||+|.+..... ..+++.+|++++++++|||++++++++.. .+..++|||
T Consensus 17 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e 95 (308)
T cd06634 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLR-EHTAWLVME 95 (308)
T ss_pred HHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEc-CCeeEEEEE
Confidence 66678899999999999995 5688999999864322 13568899999999999999999998776 567899999
Q ss_pred eCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhc
Q 004248 611 YMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQ 690 (766)
Q Consensus 611 y~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~ 690 (766)
|+. |++.+++.... ..+++.++..++.|++.|+.|||+. +++||||||+||+++.++.+||+|||++...
T Consensus 96 ~~~-~~l~~~~~~~~------~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~ 165 (308)
T cd06634 96 YCL-GSASDLLEVHK------KPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIM 165 (308)
T ss_pred ccC-CCHHHHHHHcC------CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHhEEECCCCcEEECCcccceee
Confidence 997 68888775432 2488999999999999999999987 9999999999999999999999999998765
Q ss_pred CCCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 691 GGDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 691 ~~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
... ....++..|+|||.......+. ++.++|||||||++|||++|+.||..
T Consensus 166 ~~~-~~~~~~~~y~aPE~~~~~~~~~------~~~~~Di~slG~il~el~~g~~p~~~ 216 (308)
T cd06634 166 APA-NXFVGTPYWMAPEVILAMDEGQ------YDGKVDVWSLGITCIELAERKPPLFN 216 (308)
T ss_pred cCc-ccccCCccccCHHHHhhcccCC------CCcccchHHHHHHHHHHHcCCCCCcc
Confidence 332 2345678899999864322221 47899999999999999999999854
No 374
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.96 E-value=8.8e-30 Score=277.54 Aligned_cols=198 Identities=18% Similarity=0.242 Sum_probs=166.3
Q ss_pred HhCCCCccceeecCCcceEEEEEE-cCCcEEEEEEeecccc---CHHHHHHHHHHHhhcCCCCcccceeEEEecC-----
Q 004248 532 ATGDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV---KTEAYLLELDFFSKVSHARLVPLLGHCMERE----- 602 (766)
Q Consensus 532 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~----- 602 (766)
..++|+..+.||+|++|.||+|+. .+++.||||++..... ..+.+.+|+.++++++||||+++++++...+
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF 92 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence 356788999999999999999995 4688999999864321 2456788999999999999999998665422
Q ss_pred CcEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEec
Q 004248 603 NEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLG 682 (766)
Q Consensus 603 ~~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~ 682 (766)
...++|+||+ +++|.+++... .+++.++..++.|+++||+|||+. +|+||||||+||++++++.+||+
T Consensus 93 ~~~~lv~e~~-~~~L~~~~~~~--------~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nill~~~~~~kL~ 160 (343)
T cd07851 93 QDVYLVTHLM-GADLNNIVKCQ--------KLSDDHIQFLVYQILRGLKYIHSA---GIIHRDLKPSNIAVNEDCELKIL 160 (343)
T ss_pred ccEEEEEecC-CCCHHHHHhcC--------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEc
Confidence 1389999999 56999988642 389999999999999999999997 99999999999999999999999
Q ss_pred cchhhhhcCCCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 683 SLSEVCAQGGDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 683 DFG~a~~~~~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
|||++...........++..|+|||....... ++.++|||||||++|||+||+.||...
T Consensus 161 dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~--------~~~~~DvwslGv~l~elltg~~pf~~~ 219 (343)
T cd07851 161 DFGLARHTDDEMTGYVATRWYRAPEIMLNWMH--------YNQTVDIWSVGCIMAELLTGKTLFPGS 219 (343)
T ss_pred cccccccccccccCCcccccccCHHHHhCCCC--------CCchHhHHHHHHHHHHHHhCCCCCCCC
Confidence 99999876555555677889999997653221 578999999999999999999999543
No 375
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=99.96 E-value=3.4e-30 Score=294.93 Aligned_cols=196 Identities=22% Similarity=0.309 Sum_probs=158.8
Q ss_pred HHHhCCCCccceeecCCcceEEEEE-EcCCcEEEEEEeeccc--cCHHHHHHHHHHHhhcCCCCcccceeEEEec-----
Q 004248 530 LAATGDFSDANLIKNGHSGDLFRGI-LEGGIPVVIKRIDLQS--VKTEAYLLELDFFSKVSHARLVPLLGHCMER----- 601 (766)
Q Consensus 530 ~~~~~~~~~~~~ig~G~~g~Vy~~~-~~~g~~vavK~l~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~----- 601 (766)
-+...+|++.+++|+||||.|||++ .-||+.+|||+|.... .....+.+|++++++++|||||+++..+.+.
T Consensus 475 SRY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~ 554 (1351)
T KOG1035|consen 475 SRYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELT 554 (1351)
T ss_pred hhHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccc
Confidence 4566789999999999999999999 5689999999997664 2255789999999999999999887542110
Q ss_pred --------------------------------------------------------------------------------
Q 004248 602 -------------------------------------------------------------------------------- 601 (766)
Q Consensus 602 -------------------------------------------------------------------------------- 601 (766)
T Consensus 555 ~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS 634 (1351)
T KOG1035|consen 555 VLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTS 634 (1351)
T ss_pred cccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccccc
Confidence
Q ss_pred -------------------------C--------CcEEEEEeeCCCCChhhhhhccCCCCCcCCCC-CHHHHHHHHHHHH
Q 004248 602 -------------------------E--------NEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSL-DWITRLKIAIGAA 647 (766)
Q Consensus 602 -------------------------~--------~~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l-~~~~~~~i~~~ia 647 (766)
+ ..+|+=||||+.-.+.++++++.. . .-...++++.+|+
T Consensus 635 ~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~-------~~~~d~~wrLFreIl 707 (1351)
T KOG1035|consen 635 DSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHF-------NSQRDEAWRLFREIL 707 (1351)
T ss_pred ccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhccc-------chhhHHHHHHHHHHH
Confidence 0 125788999998777777765432 1 3455688999999
Q ss_pred HHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhc----------C-----------CCCccceeeecccCC
Q 004248 648 EGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQ----------G-----------GDAHQSRITRLLRLP 706 (766)
Q Consensus 648 ~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~----------~-----------~~~~~~~~t~~y~aP 706 (766)
.||+|+|+. +||||||||.||++|++..+||+|||+|+.. . ...+..+||..|+||
T Consensus 708 EGLaYIH~~---giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAP 784 (1351)
T KOG1035|consen 708 EGLAYIHDQ---GIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAP 784 (1351)
T ss_pred HHHHHHHhC---ceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecH
Confidence 999999998 8999999999999999999999999999761 0 123456899999999
Q ss_pred CCCCCCceeeeeeeeecccccceecchHHHHHHhc
Q 004248 707 QSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF 741 (766)
Q Consensus 707 e~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt 741 (766)
|....... ..|+.|+|+||+|||++||+.
T Consensus 785 Ell~~~~~------~~Yn~KiDmYSLGIVlFEM~y 813 (1351)
T KOG1035|consen 785 ELLSDTSS------NKYNSKIDMYSLGIVLFEMLY 813 (1351)
T ss_pred HHhccccc------ccccchhhhHHHHHHHHHHhc
Confidence 98765432 127999999999999999996
No 376
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.96 E-value=1.6e-29 Score=275.49 Aligned_cols=196 Identities=17% Similarity=0.282 Sum_probs=160.8
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC-HHHHHHHHHHHhhcCCCCcccceeEEEecC---------
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK-TEAYLLELDFFSKVSHARLVPLLGHCMERE--------- 602 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~-~~~~~~E~~~l~~l~H~niv~l~~~~~~~~--------- 602 (766)
++|...+.||+|+||.||+|.. .+|+.||+|++...... .+.+.+|++++++++||||+++++++...+
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 84 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGS 84 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccccc
Confidence 5788899999999999999984 67899999998665443 567889999999999999999998654322
Q ss_pred ----CcEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCC-CC
Q 004248 603 ----NEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDD-KF 677 (766)
Q Consensus 603 ----~~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~-~~ 677 (766)
...|+||||++ ++|.+++... .+++.....++.|++.||+|||+. +|+||||||+||+++. ++
T Consensus 85 ~~~~~~~~lv~e~~~-~~L~~~~~~~--------~l~~~~~~~~~~qi~~aL~~LH~~---givH~dikp~Nili~~~~~ 152 (342)
T cd07854 85 LTELNSVYIVQEYME-TDLANVLEQG--------PLSEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANVFINTEDL 152 (342)
T ss_pred ccccceEEEEeeccc-ccHHHHHHcC--------CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCc
Confidence 24789999998 5998887532 388999999999999999999987 9999999999999984 56
Q ss_pred cEEeccchhhhhcCCC------CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 678 EVRLGSLSEVCAQGGD------AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 678 ~~kl~DFG~a~~~~~~------~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
.+|++|||.++..... .....++..|+|||....... ++.++|||||||++|||++|+.||...
T Consensus 153 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~--------~~~~~DiwSlGvil~el~~g~~pf~~~ 222 (342)
T cd07854 153 VLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNN--------YTKAIDMWAAGCIFAEMLTGKPLFAGA 222 (342)
T ss_pred eEEECCcccceecCCccccccccccccccccccCHHHHhCccc--------cCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 7999999998754211 122356888999997643221 468999999999999999999999543
No 377
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.96 E-value=2.7e-29 Score=258.93 Aligned_cols=179 Identities=19% Similarity=0.180 Sum_probs=151.1
Q ss_pred CCcceEEEEE-EcCCcEEEEEEeeccccCHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEeeCCCCChhhhhhc
Q 004248 545 GHSGDLFRGI-LEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYR 623 (766)
Q Consensus 545 G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey~~~GsL~~~l~~ 623 (766)
|.||.||+++ ..+++.||+|++.... .+.+|...+....||||+++++++.+ .+..++||||+++|+|.+++.+
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~----~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~ 78 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS----EYSRERLTIIPHCVPNMVCLHKYIVS-EDSVFLVLQHAEGGKLWSHISK 78 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh----hhhhHHHHHHhcCCCceeehhhheec-CCeEEEEEecCCCCCHHHHHHH
Confidence 8899999999 4678999999986543 34456666666789999999997765 5689999999999999999975
Q ss_pred cCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcCCCCccceeeecc
Q 004248 624 KTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLL 703 (766)
Q Consensus 624 ~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~t~~y 703 (766)
.. .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+|++|||.+...........++..|
T Consensus 79 ~~-------~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~y 148 (237)
T cd05576 79 FL-------NIPEECVKRWAAEMVVALDALHRE---GIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSCDGEAVENMY 148 (237)
T ss_pred hc-------CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCEEEecccchhccccccccCCcCccc
Confidence 43 389999999999999999999987 99999999999999999999999999887664444444567789
Q ss_pred cCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCC
Q 004248 704 RLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNL 747 (766)
Q Consensus 704 ~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~ 747 (766)
+|||...... ++.++||||+||++|||++|+.|+.
T Consensus 149 ~aPE~~~~~~---------~~~~~DvwslG~il~el~~g~~~~~ 183 (237)
T cd05576 149 CAPEVGGISE---------ETEACDWWSLGAILFELLTGKTLVE 183 (237)
T ss_pred cCCcccCCCC---------CCchhhHHHHHHHHHHHHHCcchhh
Confidence 9999875433 4679999999999999999998864
No 378
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.96 E-value=2.6e-29 Score=266.78 Aligned_cols=195 Identities=19% Similarity=0.173 Sum_probs=162.1
Q ss_pred CCCccceeecCCcceEEEEEE----cCCcEEEEEEeecccc-----CHHHHHHHHHHHhhc-CCCCcccceeEEEecCCc
Q 004248 535 DFSDANLIKNGHSGDLFRGIL----EGGIPVVIKRIDLQSV-----KTEAYLLELDFFSKV-SHARLVPLLGHCMERENE 604 (766)
Q Consensus 535 ~~~~~~~ig~G~~g~Vy~~~~----~~g~~vavK~l~~~~~-----~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~ 604 (766)
+|+..+.||+|+||.||+|+. .+++.||||.++.... ..+.+.+|++++.++ +||||+++++.+.. ++.
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~-~~~ 79 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQT-DTK 79 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeec-CCE
Confidence 467789999999999999984 3578999999864321 145688999999999 59999999986644 567
Q ss_pred EEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccc
Q 004248 605 KFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684 (766)
Q Consensus 605 ~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DF 684 (766)
.++||||+++|+|.+++.... .+++.....++.|+++||+|||+. +++||||||+||+++.++.+||+||
T Consensus 80 ~~lv~e~~~~~~L~~~~~~~~-------~~~~~~~~~~~~ql~~~l~~lH~~---~~~H~dl~p~nil~~~~~~~~l~df 149 (288)
T cd05583 80 LHLILDYVNGGELFTHLYQRE-------HFTESEVRVYIAEIVLALDHLHQL---GIIYRDIKLENILLDSEGHVVLTDF 149 (288)
T ss_pred EEEEEecCCCCcHHHHHhhcC-------CcCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEEEC
Confidence 899999999999999987543 388999999999999999999987 9999999999999999999999999
Q ss_pred hhhhhcCCC----CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCC
Q 004248 685 SEVCAQGGD----AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNL 747 (766)
Q Consensus 685 G~a~~~~~~----~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~ 747 (766)
|+++..... .....++..|++||.......+ .+.++||||||+++|||+||+.||.
T Consensus 150 g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-------~~~~~Dv~slG~il~el~tg~~p~~ 209 (288)
T cd05583 150 GLSKEFLAEEEERAYSFCGTIEYMAPEVIRGGSGG-------HDKAVDWWSLGVLTFELLTGASPFT 209 (288)
T ss_pred ccccccccccccccccccCCccccCHHHhcCCCCC-------CcchhhhHHHHHHHHHHHhCCCCcc
Confidence 998765221 1223467889999987554322 4679999999999999999999984
No 379
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.96 E-value=2.4e-29 Score=265.28 Aligned_cols=196 Identities=19% Similarity=0.265 Sum_probs=166.0
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeecccc----CHHHHHHHHHHHhhcC-CCCcccceeEEEecCCcEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV----KTEAYLLELDFFSKVS-HARLVPLLGHCMERENEKFL 607 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~----~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~~l 607 (766)
++|...+.||+|+||.||+|+. .+|+.||+|.+..... ..+.+.+|++++++++ ||||+++++++.. ++..++
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~-~~~~~l 79 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQD-EENLYF 79 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcC-CceEEE
Confidence 4688889999999999999995 4799999999865322 2457889999999998 9999999997655 568999
Q ss_pred EEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhh
Q 004248 608 VYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEV 687 (766)
Q Consensus 608 V~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a 687 (766)
||||+++|+|.+++.+.+ .+++.++..++.|++.||+|||+. +++|+||||+||+++.++.++++|||++
T Consensus 80 v~e~~~~~~L~~~l~~~~-------~l~~~~~~~i~~ql~~~l~~Lh~~---~~~H~dl~~~ni~i~~~~~~~l~df~~~ 149 (280)
T cd05581 80 VLEYAPNGELLQYIRKYG-------SLDEKCTRFYAAEILLALEYLHSK---GIIHRDLKPENILLDKDMHIKITDFGTA 149 (280)
T ss_pred EEcCCCCCcHHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEecCCccc
Confidence 999999999999997643 499999999999999999999997 9999999999999999999999999998
Q ss_pred hhcCCCC-----------------------ccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCC
Q 004248 688 CAQGGDA-----------------------HQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNH 744 (766)
Q Consensus 688 ~~~~~~~-----------------------~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~ 744 (766)
....... ....++..|++||...... .+.++|||||||+++|+++|+.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~---------~~~~~Di~slG~~l~~l~~g~~ 220 (280)
T cd05581 150 KVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKP---------AGKSSDLWALGCIIYQMLTGKP 220 (280)
T ss_pred cccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCCCC---------CChhhhHHHHHHHHHHHHhCCC
Confidence 7653221 1224567899999765433 4789999999999999999999
Q ss_pred CCCCC
Q 004248 745 LNLSS 749 (766)
Q Consensus 745 p~~~~ 749 (766)
||...
T Consensus 221 p~~~~ 225 (280)
T cd05581 221 PFRGS 225 (280)
T ss_pred CCCCc
Confidence 99543
No 380
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=1.8e-31 Score=259.83 Aligned_cols=207 Identities=17% Similarity=0.218 Sum_probs=169.2
Q ss_pred CCccceeecCCcceEEEEEE-cCCcEEEEEEeeccc---cCHHHHHHHHHHHhhcCCCCcccceeEEEecC----CcEEE
Q 004248 536 FSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQS---VKTEAYLLELDFFSKVSHARLVPLLGHCMERE----NEKFL 607 (766)
Q Consensus 536 ~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~----~~~~l 607 (766)
.+..+.||-|+||.||.... ++|+.||.|++..-. ...+++.+|++++.-.+|.|+...++.-.... .++|+
T Consensus 55 i~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV 134 (449)
T KOG0664|consen 55 IQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYV 134 (449)
T ss_pred CCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHH
Confidence 34568999999999999885 579999999985322 22568999999999999999999988643211 26899
Q ss_pred EEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhh
Q 004248 608 VYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEV 687 (766)
Q Consensus 608 V~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a 687 (766)
|.|.|.. ||...|-.- +.++-...+-+..||.+||.|||+. +|.||||||.|.|++++...||||||+|
T Consensus 135 ~TELmQS-DLHKIIVSP-------Q~Ls~DHvKVFlYQILRGLKYLHsA---~ILHRDIKPGNLLVNSNCvLKICDFGLA 203 (449)
T KOG0664|consen 135 LTELMQS-DLHKIIVSP-------QALTPDHVKVFVYQILRGLKYLHTA---NILHRDIKPGNLLVNSNCILKICDFGLA 203 (449)
T ss_pred HHHHHHh-hhhheeccC-------CCCCcchhhhhHHHHHhhhHHHhhc---chhhccCCCccEEeccCceEEecccccc
Confidence 9999985 898888533 3578888888999999999999998 9999999999999999999999999999
Q ss_pred hhcCCC----CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCCccccccceeeEEE
Q 004248 688 CAQGGD----AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSSRFGVKQQTTIIKL 762 (766)
Q Consensus 688 ~~~~~~----~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~ 762 (766)
+..+.+ .+..+.|.+|+|||.+.+... |+.++||||.|||..|++-.|.-|. .....+|++.|.++
T Consensus 204 Rvee~d~~~hMTqEVVTQYYRAPEiLMGaRh--------Ys~AvDiWSVGCIFaELLgRrILFQ-Aq~PiqQL~lItdL 273 (449)
T KOG0664|consen 204 RTWDQRDRLNMTHEVVTQYYRAPELLMGARR--------YTGAVDIWSVGCIFAELLQRKILFQ-AAGPIEQLQMIIDL 273 (449)
T ss_pred cccchhhhhhhHHHHHHHHhccHHHhhcchh--------hcCccceehhhHHHHHHHhhhhhhh-ccChHHHHHHHHHH
Confidence 986432 455678999999999987665 7899999999999999998887764 33445666655443
No 381
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=99.96 E-value=1e-28 Score=256.67 Aligned_cols=200 Identities=21% Similarity=0.264 Sum_probs=169.5
Q ss_pred CCCccceeecCCcceEEEEEE-cCCcEEEEEEeecccc---CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEe
Q 004248 535 DFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV---KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYK 610 (766)
Q Consensus 535 ~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~E 610 (766)
+|+..+.||+|+||.||++.. .++..||+|++..... ..+++.+|++++++++|||++++++.+.. .+..++|+|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~-~~~~~lv~e 79 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEE-KGKLCIVME 79 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEec-CCEEEEEEE
Confidence 477889999999999999995 4689999999976433 25678999999999999999999997765 468999999
Q ss_pred eCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhc
Q 004248 611 YMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQ 690 (766)
Q Consensus 611 y~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~ 690 (766)
|+++++|.+++.+... ....+++.++..++.+++.||+|||+. +++|+||||+||++++++.+||+|||.+...
T Consensus 80 ~~~~~~L~~~l~~~~~---~~~~~~~~~~~~i~~~i~~~l~~lh~~---~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~ 153 (258)
T cd08215 80 YADGGDLSQKIKKQKK---EGKPFPEEQILDWFVQLCLALKYLHSR---KILHRDIKPQNIFLTSNGLVKLGDFGISKVL 153 (258)
T ss_pred ecCCCcHHHHHHHhhc---cCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHHeEEcCCCcEEECCccceeec
Confidence 9999999999976431 113589999999999999999999997 9999999999999999999999999999765
Q ss_pred CCC---CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCCc
Q 004248 691 GGD---AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSSR 750 (766)
Q Consensus 691 ~~~---~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~~ 750 (766)
... .....++..|+|||...... ++.++||||+|++++||++|+.||...+
T Consensus 154 ~~~~~~~~~~~~~~~y~~pe~~~~~~---------~~~~~Dv~slG~~~~~l~~g~~p~~~~~ 207 (258)
T cd08215 154 SSTVDLAKTVVGTPYYLSPELCQNKP---------YNYKSDIWSLGCVLYELCTLKHPFEGEN 207 (258)
T ss_pred ccCcceecceeeeecccChhHhccCC---------CCccccHHHHHHHHHHHHcCCCCCCCCc
Confidence 332 22346788899999765443 4679999999999999999999996543
No 382
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.96 E-value=3.6e-29 Score=264.44 Aligned_cols=195 Identities=19% Similarity=0.286 Sum_probs=164.4
Q ss_pred CCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC---HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEee
Q 004248 536 FSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK---TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKY 611 (766)
Q Consensus 536 ~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~---~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey 611 (766)
|+..+.||+|++|.||+|+. .+++.+|+|++...... .+.+.+|++++++++||||+++++++.. ++..++|+||
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~~v~e~ 79 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRH-KGDLYLVFEF 79 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhcc-CCCEEEEEec
Confidence 56678999999999999985 57899999998654332 4678899999999999999999998765 5689999999
Q ss_pred CCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcC
Q 004248 612 MPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQG 691 (766)
Q Consensus 612 ~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~ 691 (766)
+++ +|.+++..+. ..+++.++..++.|++.||+|||+. +|+||||||+||++++++.+||+|||.+....
T Consensus 80 ~~~-~l~~~l~~~~------~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~df~~~~~~~ 149 (283)
T cd05118 80 MDT-DLYKLIKDRQ------RGLPESLIKSYLYQLLQGLAFCHSH---GILHRDLKPENLLINTEGVLKLADFGLARSFG 149 (283)
T ss_pred cCC-CHHHHHHhhc------ccCCHHHHHHHHHHHHHHHHHHHHC---CeeecCcCHHHEEECCCCcEEEeeeeeeEecC
Confidence 985 9988887543 2489999999999999999999997 99999999999999999999999999987664
Q ss_pred CCC---ccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 692 GDA---HQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 692 ~~~---~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
... ....++..|++||....... .+.++||||+||++|||+||+.||...
T Consensus 150 ~~~~~~~~~~~~~~~~~PE~~~~~~~--------~~~~~Di~slG~~l~~l~tg~~~~~~~ 202 (283)
T cd05118 150 SPVRPYTHYVVTRWYRAPELLLGDKG--------YSTPVDIWSVGCIFAELLSRRPLFPGK 202 (283)
T ss_pred CCcccccCccCcccccCcHHHhcCCC--------CCchhHHHHHHHHHHHHHhCCCCCCCC
Confidence 322 23456788999998754311 578999999999999999999998543
No 383
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.96 E-value=4.4e-29 Score=270.83 Aligned_cols=196 Identities=18% Similarity=0.163 Sum_probs=160.0
Q ss_pred CCCccceeecCCcceEEEEEE-cC--CcEEEEEEeecccc---CHHHHHHHHHHHhhc-CCCCcccceeEEEec---CCc
Q 004248 535 DFSDANLIKNGHSGDLFRGIL-EG--GIPVVIKRIDLQSV---KTEAYLLELDFFSKV-SHARLVPLLGHCMER---ENE 604 (766)
Q Consensus 535 ~~~~~~~ig~G~~g~Vy~~~~-~~--g~~vavK~l~~~~~---~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~---~~~ 604 (766)
+|+..+.||+|+||.||++.. .+ +..||||++..... ..+.+.+|+++++++ +||||+++++++... ...
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 467788999999999999994 34 78999999864321 245788999999999 599999999865421 235
Q ss_pred EEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccc
Q 004248 605 KFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684 (766)
Q Consensus 605 ~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DF 684 (766)
.|+++||+. ++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+||
T Consensus 81 ~~~~~e~~~-~~L~~~l~~~~-------~~~~~~~~~~~~qi~~aL~~LH~~---givH~dlkp~Nili~~~~~~kl~Df 149 (332)
T cd07857 81 LYLYEELME-ADLHQIIRSGQ-------PLTDAHFQSFIYQILCGLKYIHSA---NVLHRDLKPGNLLVNADCELKICDF 149 (332)
T ss_pred EEEEEeccc-CCHHHHHhcCC-------CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHeEEcCCCCEEeCcC
Confidence 789999997 69999886443 389999999999999999999997 9999999999999999999999999
Q ss_pred hhhhhcCC-------CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 685 SEVCAQGG-------DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 685 G~a~~~~~-------~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
|+++.... ......++..|+|||....... ++.++||||+||++|||++|+.||...
T Consensus 150 g~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~--------~~~~~Di~slGv~l~~l~~g~~pf~~~ 213 (332)
T cd07857 150 GLARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQS--------YTKAIDVWSVGCILAELLGRKPVFKGK 213 (332)
T ss_pred CCceecccccccccccccCcccCccccCcHHHhCCCC--------CCcHHHHHHHHHHHHHHHhCCcCCCCC
Confidence 99975421 1223467889999997643221 478999999999999999999998543
No 384
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.96 E-value=8e-29 Score=277.34 Aligned_cols=213 Identities=18% Similarity=0.221 Sum_probs=156.1
Q ss_pred HhCCCCccceeecCCcceEEEEEE-----------------cCCcEEEEEEeeccccC-HHH--------------HHHH
Q 004248 532 ATGDFSDANLIKNGHSGDLFRGIL-----------------EGGIPVVIKRIDLQSVK-TEA--------------YLLE 579 (766)
Q Consensus 532 ~~~~~~~~~~ig~G~~g~Vy~~~~-----------------~~g~~vavK~l~~~~~~-~~~--------------~~~E 579 (766)
..++|+..++||+|+||+||+|.. ..++.||||++...... .++ +..|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 367899999999999999999963 23568999998653321 223 3457
Q ss_pred HHHHhhcCCCCc-----ccceeEEEec-------CCcEEEEEeeCCCCChhhhhhccCCCC-----------------Cc
Q 004248 580 LDFFSKVSHARL-----VPLLGHCMER-------ENEKFLVYKYMPNGDLSSSLYRKTNTE-----------------DD 630 (766)
Q Consensus 580 ~~~l~~l~H~ni-----v~l~~~~~~~-------~~~~~lV~Ey~~~GsL~~~l~~~~~~~-----------------~~ 630 (766)
+.++.+++|.++ ++++++|... +++.++||||+++|+|.++++...... ..
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 777888877654 6777776431 246899999999999999997532100 01
Q ss_pred CCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcCCC--C--ccceeeecccCC
Q 004248 631 LQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGD--A--HQSRITRLLRLP 706 (766)
Q Consensus 631 ~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~~~--~--~~~~~t~~y~aP 706 (766)
...++|..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..... . ....+++.|+||
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH~~---~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aP 379 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLHRI---GIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPP 379 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeCh
Confidence 12467889999999999999999997 8999999999999999999999999999754221 1 122347889999
Q ss_pred CCCCCCceeeee-----------e--eeecccccceecchHHHHHHhcCCC-CCC
Q 004248 707 QSSEQGSSGMVI-----------Y--LFIIFTIFHIYFHGNPLFSAIFNNH-LNL 747 (766)
Q Consensus 707 e~~~~~~~g~~~-----------~--~~~~~~~~Dv~s~Gvvl~elltG~~-p~~ 747 (766)
|.+......... + .+....+.||||+||++|||++|.. ||.
T Consensus 380 E~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~ 434 (507)
T PLN03224 380 EELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVA 434 (507)
T ss_pred hhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCcc
Confidence 976532211100 0 0112346899999999999999975 663
No 385
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.96 E-value=8.2e-29 Score=261.59 Aligned_cols=194 Identities=22% Similarity=0.283 Sum_probs=163.3
Q ss_pred CCccceeecCCcceEEEEEE-cCCcEEEEEEeeccc---cCHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEee
Q 004248 536 FSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQS---VKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKY 611 (766)
Q Consensus 536 ~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey 611 (766)
|+..+.||+|+||.||+|+. .+++.||+|.+.... ...+.+.+|++++++++||||+++++++.. .+..++||||
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~~~v~e~ 79 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHT-ERKLYLVFEY 79 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhc-CCceEEEecC
Confidence 45678899999999999995 469999999997643 124678899999999999999999997765 4689999999
Q ss_pred CCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcC
Q 004248 612 MPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQG 691 (766)
Q Consensus 612 ~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~ 691 (766)
++ ++|.+++.+.. ..+++.++..++.|++.||+|||+. +|+||||||+||++++++.+||+|||.++...
T Consensus 80 ~~-~~l~~~i~~~~------~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~ 149 (282)
T cd07829 80 CD-MDLKKYLDKRP------GPLSPNLIKSIMYQLLRGLAYCHSH---RILHRDLKPQNILINRDGVLKLADFGLARAFG 149 (282)
T ss_pred cC-cCHHHHHHhhc------cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChheEEEcCCCCEEEecCCcccccC
Confidence 98 59999997642 2489999999999999999999998 99999999999999999999999999987653
Q ss_pred CC---CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 692 GD---AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 692 ~~---~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
.. ......+..|+|||....... ++.++|||||||++|||++|+.||..
T Consensus 150 ~~~~~~~~~~~~~~~~aPE~~~~~~~--------~~~~~Dv~slG~~l~~l~~~~~~~~~ 201 (282)
T cd07829 150 IPLRTYTHEVVTLWYRAPEILLGSKH--------YSTAVDIWSVGCIFAEMITGKPLFPG 201 (282)
T ss_pred CCccccCccccCcCcCChHHhcCCcC--------CCccccHHHHHHHHHHHHhCCCCCCC
Confidence 32 223345678999998754321 57899999999999999999998854
No 386
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.96 E-value=1.6e-29 Score=274.54 Aligned_cols=196 Identities=17% Similarity=0.165 Sum_probs=163.1
Q ss_pred hCCCCccceeecCCcceEEEEE-EcCCcEEEEEEeeccccCHHHHHHHHHHHhhc-CCCCcccceeEEEecCCcEEEEEe
Q 004248 533 TGDFSDANLIKNGHSGDLFRGI-LEGGIPVVIKRIDLQSVKTEAYLLELDFFSKV-SHARLVPLLGHCMERENEKFLVYK 610 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~~lV~E 610 (766)
++.|.....+|.|+|+.|-++. ..+++..+||++.... .+-.+|+.++... +||||+++++.|.+ ..+.|+|||
T Consensus 321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~---~~~~~e~~~~~~~~~h~niv~~~~v~~~-~~~~~~v~e 396 (612)
T KOG0603|consen 321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA---DDNQDEIPISLLVRDHPNIVKSHDVYED-GKEIYLVME 396 (612)
T ss_pred chhhccccccCCCCccceeeeeccccccchhheeccccc---cccccccchhhhhcCCCcceeecceecC-Cceeeeeeh
Confidence 4557777789999999999998 6778999999997652 2234577666666 79999999998865 568999999
Q ss_pred eCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeee-CCCCcEEeccchhhhh
Q 004248 611 YMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILL-DDKFEVRLGSLSEVCA 689 (766)
Q Consensus 611 y~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl-~~~~~~kl~DFG~a~~ 689 (766)
++.+|.+.+.+...+. .. ..+..++.+++.|+.|||++ +|||||+||+|||+ ++.++++|+|||.++.
T Consensus 397 ~l~g~ell~ri~~~~~-------~~-~e~~~w~~~lv~Av~~LH~~---gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~ 465 (612)
T KOG0603|consen 397 LLDGGELLRRIRSKPE-------FC-SEASQWAAELVSAVDYLHEQ---GVVHRDLKPGNILLDGSAGHLRLTYFGFWSE 465 (612)
T ss_pred hccccHHHHHHHhcch-------hH-HHHHHHHHHHHHHHHHHHhc---CeeecCCChhheeecCCCCcEEEEEechhhh
Confidence 9999998888865442 23 66778999999999999998 99999999999999 5899999999999998
Q ss_pred cCCCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCCccc
Q 004248 690 QGGDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSSRFG 752 (766)
Q Consensus 690 ~~~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~~~~ 752 (766)
......+.+.|..|.|||+.... + +|++||||||||+||||++|+.||.....+
T Consensus 466 ~~~~~~tp~~t~~y~APEvl~~~--~-------yt~acD~WSLGvlLy~ML~G~tp~~~~P~~ 519 (612)
T KOG0603|consen 466 LERSCDTPALTLQYVAPEVLAIQ--E-------YTEACDWWSLGVLLYEMLTGRTLFAAHPAG 519 (612)
T ss_pred CchhhcccchhhcccChhhhccC--C-------CCcchhhHHHHHHHHHHHhCCCccccCCch
Confidence 76665555778999999998733 2 599999999999999999999999644433
No 387
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.96 E-value=5.7e-30 Score=255.81 Aligned_cols=204 Identities=20% Similarity=0.232 Sum_probs=170.0
Q ss_pred CCCCccceeecCCcceEEEEE-EcCCcEEEEEEeeccc---cCHHHHHHHHHHHhhcCCCCcccceeEEEecC-----Cc
Q 004248 534 GDFSDANLIKNGHSGDLFRGI-LEGGIPVVIKRIDLQS---VKTEAYLLELDFFSKVSHARLVPLLGHCMERE-----NE 604 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~-~~~g~~vavK~l~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-----~~ 604 (766)
.+|.....+|.|.- .|..|. .-.++.||+|++.... ...++..+|..+|..++|+|||+++.++...+ .+
T Consensus 17 ~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e 95 (369)
T KOG0665|consen 17 KRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQE 95 (369)
T ss_pred eeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHh
Confidence 45677788898887 666665 3468899999985432 23567889999999999999999999775432 36
Q ss_pred EEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccc
Q 004248 605 KFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684 (766)
Q Consensus 605 ~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DF 684 (766)
.|+|||||. ++|...++- .++..+...|..|++.|+.|||+. +|+||||||+||++..+..+||.||
T Consensus 96 ~y~v~e~m~-~nl~~vi~~---------elDH~tis~i~yq~~~~ik~lhs~---~IihRdLkPsnivv~~~~~lKi~df 162 (369)
T KOG0665|consen 96 VYLVMELMD-ANLCQVILM---------ELDHETISYILYQMLCGIKHLHSA---GIIHRDLKPSNIVVNSDCTLKILDF 162 (369)
T ss_pred HHHHHHhhh-hHHHHHHHH---------hcchHHHHHHHHHHHHHHHHHHhc---ceeecccCcccceecchhheeeccc
Confidence 899999997 599999872 278889999999999999999998 9999999999999999999999999
Q ss_pred hhhhhcCC--CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCCccccccceeeEEE
Q 004248 685 SEVCAQGG--DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSSRFGVKQQTTIIKL 762 (766)
Q Consensus 685 G~a~~~~~--~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~ 762 (766)
|+|+..+. ..+.++.|++|+|||++.+.. +.+.+||||.||++.||++|+.-| .+.+.+++|.|+
T Consensus 163 g~ar~e~~~~~mtpyVvtRyyrapevil~~~---------~ke~vdiwSvGci~gEli~~~Vlf----~g~d~idQ~~ki 229 (369)
T KOG0665|consen 163 GLARTEDTDFMMTPYVVTRYYRAPEVILGMG---------YKENVDIWSVGCIMGELILGTVLF----PGKDHIDQWNKI 229 (369)
T ss_pred hhhcccCcccccCchhheeeccCchheeccC---------CcccchhhhhhhHHHHHhhceEEe----cCchHHHHHHHH
Confidence 99987754 367789999999999987654 368999999999999999999888 566677777665
Q ss_pred Ee
Q 004248 763 CV 764 (766)
Q Consensus 763 ~~ 764 (766)
..
T Consensus 230 ~~ 231 (369)
T KOG0665|consen 230 IE 231 (369)
T ss_pred HH
Confidence 44
No 388
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.96 E-value=1.7e-28 Score=254.32 Aligned_cols=189 Identities=19% Similarity=0.207 Sum_probs=161.5
Q ss_pred eecCCcceEEEEEEc-CCcEEEEEEeeccccC----HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEeeCCCCC
Q 004248 542 IKNGHSGDLFRGILE-GGIPVVIKRIDLQSVK----TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGD 616 (766)
Q Consensus 542 ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~----~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey~~~Gs 616 (766)
||+|+||.||++... +++.||+|.++..... .+.+.+|++++++++||||+++++.+.. ++..++||||+++++
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~~v~e~~~~~~ 79 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQT-EEKLYLVLEYAPGGE 79 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeec-CCeeEEEEecCCCCc
Confidence 699999999999954 5899999998765432 4578999999999999999999987654 568999999999999
Q ss_pred hhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcCCC---
Q 004248 617 LSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGD--- 693 (766)
Q Consensus 617 L~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~~~--- 693 (766)
|.+++.... .+++.....++.|++.|+.|||+. +++|+||||+||+++.++.+||+|||.+......
T Consensus 80 L~~~l~~~~-------~l~~~~~~~~~~qi~~~l~~lh~~---~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~ 149 (250)
T cd05123 80 LFSHLSKEG-------RFSEERARFYAAEIVLALEYLHSL---GIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSR 149 (250)
T ss_pred HHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcceEEEcCCCcEEEeecCcceecccCCCc
Confidence 999997543 389999999999999999999997 9999999999999999999999999998765332
Q ss_pred CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCCc
Q 004248 694 AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSSR 750 (766)
Q Consensus 694 ~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~~ 750 (766)
.....++..|++||...... .+.++|+||||+++||+++|+.||...+
T Consensus 150 ~~~~~~~~~~~~Pe~~~~~~---------~~~~~D~~slG~~~~~l~~g~~p~~~~~ 197 (250)
T cd05123 150 TNTFCGTPEYLAPEVLLGKG---------YGKAVDWWSLGVLLYEMLTGKPPFYAED 197 (250)
T ss_pred ccCCcCCccccChHHhCCCC---------CCchhhHHHHHHHHHHHHHCCCCCCCCC
Confidence 33445678899999875433 4678999999999999999999995443
No 389
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.95 E-value=1.7e-28 Score=256.37 Aligned_cols=197 Identities=17% Similarity=0.189 Sum_probs=157.5
Q ss_pred CCCccceeecCCcceEEEEEEc-CCcEEEEEEeec---ccc---CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEE
Q 004248 535 DFSDANLIKNGHSGDLFRGILE-GGIPVVIKRIDL---QSV---KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFL 607 (766)
Q Consensus 535 ~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~---~~~---~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~l 607 (766)
+|...+.||+|+||.||+++.. .+..+++|.++. ... ...++.+|+.++++++||||+++++++.+ .+..++
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~l 79 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLE-RDAFCI 79 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhc-CCceEE
Confidence 4777899999999999999853 344555555532 111 23467789999999999999999997765 457899
Q ss_pred EEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhh
Q 004248 608 VYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEV 687 (766)
Q Consensus 608 V~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a 687 (766)
||||+++++|.+++++... ....++|.+++.++.|++.||+|||+. +++||||||+||++++ +.+||+|||++
T Consensus 80 v~e~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~~l~~~nili~~-~~~~l~d~g~~ 152 (260)
T cd08222 80 ITEYCEGRDLDCKLEELKH---TGKTLSENQVCEWFIQLLLGVHYMHQR---RILHRDLKAKNIFLKN-NLLKIGDFGVS 152 (260)
T ss_pred EEEeCCCCCHHHHHHHHhh---cccccCHHHHHHHHHHHHHHHHHHHHc---CccccCCChhheEeec-CCEeecccCce
Confidence 9999999999999875321 123589999999999999999999987 9999999999999975 56999999998
Q ss_pred hhcCCC---CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 688 CAQGGD---AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 688 ~~~~~~---~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
+..... .....++..|+|||...... ++.++||||||+++|||++|+.||..
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~pe~~~~~~---------~~~~~Dv~slG~~~~~l~~~~~~~~~ 207 (260)
T cd08222 153 RLLMGSCDLATTFTGTPYYMSPEALKHQG---------YDSKSDIWSLGCILYEMCCLAHAFEG 207 (260)
T ss_pred eecCCCcccccCCCCCcCccCHHHHccCC---------CCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 765322 22344677899999765433 46789999999999999999999853
No 390
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.95 E-value=5.6e-28 Score=279.98 Aligned_cols=201 Identities=19% Similarity=0.309 Sum_probs=163.5
Q ss_pred CCCCccceeecCCcceEEEEEEc----C----CcEEEEEEeeccccC--HHHHHHHHHHHhhc-CCCCcccceeEEEecC
Q 004248 534 GDFSDANLIKNGHSGDLFRGILE----G----GIPVVIKRIDLQSVK--TEAYLLELDFFSKV-SHARLVPLLGHCMERE 602 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~~----~----g~~vavK~l~~~~~~--~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~ 602 (766)
++....+.+|+|.||.|++|... . ...||||.++..... .+.+..|+++|+.+ +|||||.++|+|.. +
T Consensus 296 ~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~-~ 374 (609)
T KOG0200|consen 296 ENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQ-D 374 (609)
T ss_pred hhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeecc-C
Confidence 33445569999999999999832 1 458999999764433 67899999999999 69999999999987 6
Q ss_pred CcEEEEEeeCCCCChhhhhhccC---CCCCc----C--CCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeee
Q 004248 603 NEKFLVYKYMPNGDLSSSLYRKT---NTEDD----L--QSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILL 673 (766)
Q Consensus 603 ~~~~lV~Ey~~~GsL~~~l~~~~---~~~~~----~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl 673 (766)
+..++|+||++.|+|.++++.++ ..... . ..++..+.+.++.|||.|++||++. ++||||+.++|||+
T Consensus 375 ~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~---~~vHRDLAaRNVLi 451 (609)
T KOG0200|consen 375 GPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASV---PCVHRDLAARNVLI 451 (609)
T ss_pred CceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhC---CccchhhhhhhEEe
Confidence 78999999999999999998766 10011 1 2489999999999999999999998 89999999999999
Q ss_pred CCCCcEEeccchhhhhcCCCCc----cceeee--cccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCC
Q 004248 674 DDKFEVRLGSLSEVCAQGGDAH----QSRITR--LLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLN 746 (766)
Q Consensus 674 ~~~~~~kl~DFG~a~~~~~~~~----~~~~t~--~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~ 746 (766)
.++..+||+|||+|+....... ...++. .+||||.+.... ++.|+|||||||+|||+.| |..|+
T Consensus 452 ~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~---------ft~kSDVWSfGI~L~EifsLG~~PY 522 (609)
T KOG0200|consen 452 TKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRV---------FTSKSDVWSFGILLWEIFTLGGTPY 522 (609)
T ss_pred cCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCc---------ccccchhhHHHHHHHHHhhCCCCCC
Confidence 9999999999999996532211 111112 389999886533 6899999999999999999 78888
Q ss_pred C
Q 004248 747 L 747 (766)
Q Consensus 747 ~ 747 (766)
.
T Consensus 523 p 523 (609)
T KOG0200|consen 523 P 523 (609)
T ss_pred C
Confidence 4
No 391
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.95 E-value=4.5e-29 Score=255.07 Aligned_cols=199 Identities=15% Similarity=0.147 Sum_probs=166.8
Q ss_pred hCCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccCHHHHHHHHHHHhhcCC--CC----cccceeEEEecCCcE
Q 004248 533 TGDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSH--AR----LVPLLGHCMERENEK 605 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~H--~n----iv~l~~~~~~~~~~~ 605 (766)
+++|.....+|+|.||.|-++.. ..+..||||+++.-..-++.-+-|+++++++.+ |+ +|.+.+++ +-.++.
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wF-dyrghi 166 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDKYREAALIEIEVLQKINESDPNGKFRCVQMRDWF-DYRGHI 166 (415)
T ss_pred ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhh-hccCce
Confidence 67899999999999999999984 458999999997554446778889999999942 33 67777744 446789
Q ss_pred EEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCC---------
Q 004248 606 FLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDK--------- 676 (766)
Q Consensus 606 ~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~--------- 676 (766)
++|+|.+. -+++++|..+.. .+++..++..++.|++++++|||+. +++|-||||+|||+-+.
T Consensus 167 CivfellG-~S~~dFlk~N~y-----~~fpi~~ir~m~~QL~~sv~fLh~~---kl~HTDLKPENILfvss~~~~~~~~k 237 (415)
T KOG0671|consen 167 CIVFELLG-LSTFDFLKENNY-----IPFPIDHIRHMGYQLLESVAFLHDL---KLTHTDLKPENILFVSSEYFKTYNPK 237 (415)
T ss_pred EEEEeccC-hhHHHHhccCCc-----cccchHHHHHHHHHHHHHHHHHHhc---ceeecCCChheEEEeccceEEEeccC
Confidence 99999993 499999976543 5689999999999999999999997 99999999999998422
Q ss_pred -----------CcEEeccchhhhhcCCCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCC
Q 004248 677 -----------FEVRLGSLSEVCAQGGDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHL 745 (766)
Q Consensus 677 -----------~~~kl~DFG~a~~~~~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p 745 (766)
..+||.|||.|+......++.+.|+.|+|||++.+-.+ +.++||||+||||+|+.||..-
T Consensus 238 ~~~~~~r~~ks~~I~vIDFGsAtf~~e~hs~iVsTRHYRAPEViLgLGw---------S~pCDvWSiGCIL~ElytG~~L 308 (415)
T KOG0671|consen 238 KKVCFIRPLKSTAIKVIDFGSATFDHEHHSTIVSTRHYRAPEVILGLGW---------SQPCDVWSIGCILVELYTGETL 308 (415)
T ss_pred CccceeccCCCcceEEEecCCcceeccCcceeeeccccCCchheeccCc---------CCccCceeeeeEEEEeecccee
Confidence 34899999999887777777889999999999987665 5699999999999999999988
Q ss_pred CCCCc
Q 004248 746 NLSSR 750 (766)
Q Consensus 746 ~~~~~ 750 (766)
|...+
T Consensus 309 FqtHe 313 (415)
T KOG0671|consen 309 FQTHE 313 (415)
T ss_pred cccCC
Confidence 85433
No 392
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.95 E-value=4e-28 Score=258.14 Aligned_cols=195 Identities=18% Similarity=0.211 Sum_probs=167.9
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccCH---------HHHHHHHHHHhhcC---CCCcccceeEEEe
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVKT---------EAYLLELDFFSKVS---HARLVPLLGHCME 600 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~---------~~~~~E~~~l~~l~---H~niv~l~~~~~~ 600 (766)
.+|...+.+|+|+||.|..|.. ++...|+||.+.+...-. -..-.|+.||..++ |+||++++++|.+
T Consensus 561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEd 640 (772)
T KOG1152|consen 561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFED 640 (772)
T ss_pred ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeec
Confidence 4688899999999999999984 457799999997654321 13456999999997 9999999996654
Q ss_pred cCCcEEEEEeeC-CCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcE
Q 004248 601 RENEKFLVYKYM-PNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEV 679 (766)
Q Consensus 601 ~~~~~~lV~Ey~-~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~ 679 (766)
++.+||+||-- ++-||+++|..+.. +++.....|+.||+.|+++||+. +|||||||-+||.+|.+|-+
T Consensus 641 -dd~yyl~te~hg~gIDLFd~IE~kp~-------m~E~eAk~IFkQV~agi~hlh~~---~ivhrdikdenvivd~~g~~ 709 (772)
T KOG1152|consen 641 -DDYYYLETEVHGEGIDLFDFIEFKPR-------MDEPEAKLIFKQVVAGIKHLHDQ---GIVHRDIKDENVIVDSNGFV 709 (772)
T ss_pred -CCeeEEEecCCCCCcchhhhhhccCc-------cchHHHHHHHHHHHhcccccccc---CceecccccccEEEecCCeE
Confidence 67899999954 56699999987654 99999999999999999999998 99999999999999999999
Q ss_pred Eeccchhhhhc-CCCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCC
Q 004248 680 RLGSLSEVCAQ-GGDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNL 747 (766)
Q Consensus 680 kl~DFG~a~~~-~~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~ 747 (766)
||.|||.|... .++....+||..|.|||.+.+..| .+..-|||++|++||.++...-||.
T Consensus 710 klidfgsaa~~ksgpfd~f~gtv~~aapevl~g~~y--------~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 710 KLIDFGSAAYTKSGPFDVFVGTVDYAAPEVLGGEKY--------LGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred EEeeccchhhhcCCCcceeeeeccccchhhhCCCcc--------CCCcchhhhhhheeeEEEeccCCCc
Confidence 99999998765 556677899999999999987765 4567799999999999999998984
No 393
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.95 E-value=8.1e-28 Score=275.99 Aligned_cols=210 Identities=16% Similarity=0.167 Sum_probs=145.0
Q ss_pred HhCCCCccceeecCCcceEEEEEE-cC----CcEEEEEEeeccccCHHHHHHHHHHHhhcCCCCcccceeEEE-----ec
Q 004248 532 ATGDFSDANLIKNGHSGDLFRGIL-EG----GIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCM-----ER 601 (766)
Q Consensus 532 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~----g~~vavK~l~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~-----~~ 601 (766)
..++|+..++||+|+||.||+|+. .+ +..||||++..... .+.+..| .+....+.+++.+...+. ..
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~-~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~~ 206 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA-VEIWMNE--RVRRACPNSCADFVYGFLEPVSSKK 206 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch-hHHHHHH--HHHhhchhhHHHHHHhhhccccccc
Confidence 467899999999999999999995 45 78999999754321 2222222 122223333333222111 23
Q ss_pred CCcEEEEEeeCCCCChhhhhhccCCCC-------------CcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCC
Q 004248 602 ENEKFLVYKYMPNGDLSSSLYRKTNTE-------------DDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQA 668 (766)
Q Consensus 602 ~~~~~lV~Ey~~~GsL~~~l~~~~~~~-------------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp 668 (766)
+.+.++||||+++|+|.+++....... .......+..+..++.|++.||+|||+. +||||||||
T Consensus 207 ~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~---gIiHRDLKP 283 (566)
T PLN03225 207 EDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHST---GIVHRDVKP 283 (566)
T ss_pred CCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHC---CEEeCcCCH
Confidence 457999999999999999987542100 0001122344667999999999999997 999999999
Q ss_pred CCeeeCC-CCcEEeccchhhhhcCC----CCccceeeecccCCCCCCCCceeeee-------------eeeeccccccee
Q 004248 669 SSILLDD-KFEVRLGSLSEVCAQGG----DAHQSRITRLLRLPQSSEQGSSGMVI-------------YLFIIFTIFHIY 730 (766)
Q Consensus 669 ~NILl~~-~~~~kl~DFG~a~~~~~----~~~~~~~t~~y~aPe~~~~~~~g~~~-------------~~~~~~~~~Dv~ 730 (766)
+|||+++ ++.+||+|||+|+.... ......+++.|+|||.+......... +...++.++|||
T Consensus 284 ~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVw 363 (566)
T PLN03225 284 QNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIY 363 (566)
T ss_pred HHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccH
Confidence 9999996 68999999999976522 22345678999999965432221110 112357789999
Q ss_pred cchHHHHHHhcCCCCCC
Q 004248 731 FHGNPLFSAIFNNHLNL 747 (766)
Q Consensus 731 s~Gvvl~elltG~~p~~ 747 (766)
||||++|||+++..|++
T Consensus 364 SlGviL~el~~~~~~~~ 380 (566)
T PLN03225 364 SAGLIFLQMAFPNLRSD 380 (566)
T ss_pred HHHHHHHHHHhCcCCCc
Confidence 99999999999876653
No 394
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=99.95 E-value=4.6e-29 Score=265.34 Aligned_cols=293 Identities=24% Similarity=0.244 Sum_probs=227.5
Q ss_pred ccchhhhccCCCCCEEecCCCCCCCCCchhhhhCCCCCCEEEccCCCCCccCCcccCCCCCCcEEEeecCcCCCCCCccc
Q 004248 107 RFAADALVNLTHLASFNASRFLLPGSIPDWLGQQLPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPSSL 186 (766)
Q Consensus 107 ~~~~~~l~~l~~L~~L~ls~n~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l 186 (766)
++...++..++.|++||||.|.++ .||..-+..-.++++|+|++|.|+..--..|.++.+|..|.|+.|+++...+..|
T Consensus 139 sv~se~L~~l~alrslDLSrN~is-~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~F 217 (873)
T KOG4194|consen 139 SVTSEELSALPALRSLDLSRNLIS-EIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSF 217 (873)
T ss_pred cccHHHHHhHhhhhhhhhhhchhh-cccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccccCHHHh
Confidence 344556777888888888888764 4443322224578888888888887777788888888888888888886666677
Q ss_pred cCCCCCCEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCCCCCCCccEEEccCCCCCCCCccccCCCCCCCE
Q 004248 187 GQLSVLSVLDLSRNSLTGNIPTSFGLLKNLSSLDISSNYLTGSIPPGLGTLSKLQYLNVSNNSLASSIPAQLGDLDSLVD 266 (766)
Q Consensus 187 ~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~ 266 (766)
.+|++|+.|+|..|++.-.---.|.+|++|+.|.|..|.+...-...|..|.++++|+|+.|+++..--.++.+|++|+.
T Consensus 218 k~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~ 297 (873)
T KOG4194|consen 218 KRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQ 297 (873)
T ss_pred hhcchhhhhhccccceeeehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhcccccccchhhh
Confidence 77888888888888886333456788888888888888887655666788888888888888888777778888888889
Q ss_pred EEccCCcCCccCCcccCCCCCCCEEEccCccCccccCCCccCCCCcccEEEccCCCCCCCCCcccCCCCCCCEEEccCCC
Q 004248 267 LDLSMNSLSGSVPSELRGLRSLQKFVIGNNFLSGNLSVNLFPTVSQLQIIVLRQNGFTGPPPDVLWSMPQLRLLDISRNN 346 (766)
Q Consensus 267 L~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~ 346 (766)
|+||+|.+...-++.+...++|+.|+|++|+++ .+++..|..++.|+.|+|++|.++..-...|..+++|+.|||++|.
T Consensus 298 L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~-~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ 376 (873)
T KOG4194|consen 298 LDLSYNAIQRIHIDSWSFTQKLKELDLSSNRIT-RLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNE 376 (873)
T ss_pred hccchhhhheeecchhhhcccceeEeccccccc-cCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCe
Confidence 999999888888888888888899999988887 5666677888888888999998888777888888889999999998
Q ss_pred CCCCCCcc--cccCCCCCcEEEccCCcCccC---CCcCCCCCCEEeccCCcCccccChhh
Q 004248 347 FTGPLPNS--RSNVNTSTVELNISQNMFYGG---LTPVLGRFRLVDLSGNYFEGRVPEYV 401 (766)
Q Consensus 347 l~g~~p~~--~~~~~~~l~~L~ls~N~l~g~---~~~~l~~l~~ldLs~N~l~g~~p~~~ 401 (766)
+++.|.+. .+..+++|+.|++.+|++..- ....+..|+.|||.+|.+...-|+.+
T Consensus 377 ls~~IEDaa~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~nAF 436 (873)
T KOG4194|consen 377 LSWCIEDAAVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQPNAF 436 (873)
T ss_pred EEEEEecchhhhccchhhhheeecCceeeecchhhhccCcccceecCCCCcceeeccccc
Confidence 88766542 345577888888888887531 22457888889999988876555544
No 395
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=99.95 E-value=7.8e-29 Score=263.57 Aligned_cols=286 Identities=26% Similarity=0.254 Sum_probs=192.0
Q ss_pred hhhhccCCCCCEEecCCCCCCCCCchhhhhCCCCCCEEEccCCCCCccCCcccCCCCCCcEEEeecCcCCCCCCccccCC
Q 004248 110 ADALVNLTHLASFNASRFLLPGSIPDWLGQQLPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPSSLGQL 189 (766)
Q Consensus 110 ~~~l~~l~~L~~L~ls~n~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L 189 (766)
+..+.++++|+.+++..|.+. .||..... ..+|+.|+|.+|.|+.+-.+++..++.|+.||||.|.++..--.+|..-
T Consensus 95 ~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~-sghl~~L~L~~N~I~sv~se~L~~l~alrslDLSrN~is~i~~~sfp~~ 172 (873)
T KOG4194|consen 95 FEFFYNLPNLQEVNLNKNELT-RIPRFGHE-SGHLEKLDLRHNLISSVTSEELSALPALRSLDLSRNLISEIPKPSFPAK 172 (873)
T ss_pred HHHHhcCCcceeeeeccchhh-hccccccc-ccceeEEeeeccccccccHHHHHhHhhhhhhhhhhchhhcccCCCCCCC
Confidence 456788999999999888774 67765433 6678888888888887777777888888888888888875444566666
Q ss_pred CCCCEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCCCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEc
Q 004248 190 SVLSVLDLSRNSLTGNIPTSFGLLKNLSSLDISSNYLTGSIPPGLGTLSKLQYLNVSNNSLASSIPAQLGDLDSLVDLDL 269 (766)
Q Consensus 190 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 269 (766)
.++++|+|++|+|+..--..|.++.+|..|.|+.|+++...+..|.+|++|+.|+|..|+|.-.--..|..|++|+.|.|
T Consensus 173 ~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlkl 252 (873)
T KOG4194|consen 173 VNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKL 252 (873)
T ss_pred CCceEEeeccccccccccccccccchheeeecccCcccccCHHHhhhcchhhhhhccccceeeehhhhhcCchhhhhhhh
Confidence 77888888888887766777778888888888888887555556666888888888888775332345666667777777
Q ss_pred cCCcCCccCCcccCCCCCCCEEEccCccCccccCCCccCCCCcccEEEccCCCCCCCCCcccCCCCCCCEEEccCCCCCC
Q 004248 270 SMNSLSGSVPSELRGLRSLQKFVIGNNFLSGNLSVNLFPTVSQLQIIVLRQNGFTGPPPDVLWSMPQLRLLDISRNNFTG 349 (766)
Q Consensus 270 s~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g 349 (766)
..|.++..-...|..+.++++|+|+.|+++..-..++ -+++.|+.|+||+|.+..+-++.+.-.++|+.|||++|+++
T Consensus 253 qrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~l-fgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~- 330 (873)
T KOG4194|consen 253 QRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWL-FGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRIT- 330 (873)
T ss_pred hhcCcccccCcceeeecccceeecccchhhhhhcccc-cccchhhhhccchhhhheeecchhhhcccceeEeccccccc-
Confidence 7776666555666666666677776666653333333 35666666666666666666666666666666666666666
Q ss_pred CCCcccccCCCCCcEEEccCCcCcc---CCCcCCCCCCEEeccCCcCccccCh
Q 004248 350 PLPNSRSNVNTSTVELNISQNMFYG---GLTPVLGRFRLVDLSGNYFEGRVPE 399 (766)
Q Consensus 350 ~~p~~~~~~~~~l~~L~ls~N~l~g---~~~~~l~~l~~ldLs~N~l~g~~p~ 399 (766)
.++...+..+..|.+|+|++|.+.. .....+.+|+.|||++|.+++.|.+
T Consensus 331 ~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IED 383 (873)
T KOG4194|consen 331 RLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIED 383 (873)
T ss_pred cCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEec
Confidence 3444444555556666666665432 2223445555566666655555543
No 396
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.95 E-value=6.8e-29 Score=242.18 Aligned_cols=203 Identities=14% Similarity=0.241 Sum_probs=167.5
Q ss_pred CCCCccceeecCCcceEEEEE-EcCCcEEEEEEeeccccCHHHHHHHHHHHhhc-CCCCcccceeEEEecCCcEEEEEee
Q 004248 534 GDFSDANLIKNGHSGDLFRGI-LEGGIPVVIKRIDLQSVKTEAYLLELDFFSKV-SHARLVPLLGHCMERENEKFLVYKY 611 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~~lV~Ey 611 (766)
+.|.+.+.+|+|.||.+-.+. .++.+.+|+|.+.......++|.+|..---.| .|.|||.-|+..+++.+.+.+++||
T Consensus 24 d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE~ 103 (378)
T KOG1345|consen 24 DVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQEF 103 (378)
T ss_pred hhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeecc
Confidence 347778899999999999998 56788999999988777788999998765556 5899999999888877788899999
Q ss_pred CCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeC-C-CCcEEeccchhhhh
Q 004248 612 MPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLD-D-KFEVRLGSLSEVCA 689 (766)
Q Consensus 612 ~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~-~-~~~~kl~DFG~a~~ 689 (766)
+|.|||.+-+... .+.+...++++.|++.|++|||++ .+||||||.+||||- . ...+|+||||..+.
T Consensus 104 aP~gdL~snv~~~--------GigE~~~K~v~~ql~SAi~fMHsk---nlVHRdlK~eNiLif~~df~rvKlcDFG~t~k 172 (378)
T KOG1345|consen 104 APRGDLRSNVEAA--------GIGEANTKKVFAQLLSAIEFMHSK---NLVHRDLKAENILIFDADFYRVKLCDFGLTRK 172 (378)
T ss_pred CccchhhhhcCcc--------cccHHHHHHHHHHHHHHHHHhhcc---chhhcccccceEEEecCCccEEEeeecccccc
Confidence 9999999887543 277888999999999999999998 999999999999994 3 35799999999877
Q ss_pred cCCCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCCcc
Q 004248 690 QGGDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSSRF 751 (766)
Q Consensus 690 ~~~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~~~ 751 (766)
.+.......-+-.|.+||.......+... ..+.+|||.||+++|..+||+.|+.....
T Consensus 173 ~g~tV~~~~~~~~y~~pe~~~~~~ne~~~----~~ps~D~WqfGIi~f~cltG~~PWQka~~ 230 (378)
T KOG1345|consen 173 VGTTVKYLEYVNNYHAPELCDTVVNEKLV----VNPSTDIWQFGIIFFYCLTGKFPWQKASI 230 (378)
T ss_pred cCceehhhhhhcccCCcHHHhhccccceE----ecccccchheeeeeeeeecCCCcchhhhc
Confidence 65544433445678999866544433322 68899999999999999999999964433
No 397
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.94 E-value=4.3e-27 Score=239.16 Aligned_cols=195 Identities=23% Similarity=0.299 Sum_probs=165.6
Q ss_pred CCccceeecCCcceEEEEEEcC-CcEEEEEEeecccc--CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEeeC
Q 004248 536 FSDANLIKNGHSGDLFRGILEG-GIPVVIKRIDLQSV--KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYM 612 (766)
Q Consensus 536 ~~~~~~ig~G~~g~Vy~~~~~~-g~~vavK~l~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey~ 612 (766)
|+..+.||+|++|.||+|...+ ++.+|+|.+..... ..+.+.+|++.+++++|+|++++++++.. ....++++||+
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~-~~~~~~v~e~~ 79 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFED-PEPLYLVMEYC 79 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeec-CCceEEEEecc
Confidence 4567899999999999999654 89999999976543 35688999999999999999999998765 46799999999
Q ss_pred CCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcCC
Q 004248 613 PNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGG 692 (766)
Q Consensus 613 ~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~~ 692 (766)
++++|.+++..... .+++.+...++.+++.++.|||.. +++|+|++|+||+++.++.++|+|||.+.....
T Consensus 80 ~~~~L~~~~~~~~~------~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~ 150 (225)
T smart00221 80 EGGDLFDYLRKKGG------KLSEEEARFYLRQILEALEYLHSL---GIVHRDLKPENILLGMDGLVKLADFGLARFIHR 150 (225)
T ss_pred CCCCHHHHHHhccc------CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeeCceeeEecC
Confidence 99999999975432 178999999999999999999997 999999999999999999999999999887643
Q ss_pred CC----ccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 693 DA----HQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 693 ~~----~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
.. ....++..|++||... .... ++.++|||+||++++||++|+.||..
T Consensus 151 ~~~~~~~~~~~~~~~~~pe~~~-~~~~-------~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 151 DLAALLKTVKGTPFYLAPEVLL-GGKG-------YGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred cccccccceeccCCcCCHhHhc-CCCC-------CCchhhHHHHHHHHHHHHHCCCCccc
Confidence 32 4456677899999864 1111 46799999999999999999999954
No 398
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.93 E-value=1.1e-25 Score=230.98 Aligned_cols=183 Identities=22% Similarity=0.248 Sum_probs=157.9
Q ss_pred CcceEEEEEEc-CCcEEEEEEeeccccC--HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEeeCCCCChhhhhh
Q 004248 546 HSGDLFRGILE-GGIPVVIKRIDLQSVK--TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLY 622 (766)
Q Consensus 546 ~~g~Vy~~~~~-~g~~vavK~l~~~~~~--~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey~~~GsL~~~l~ 622 (766)
+||.||+|+.. +|+.||+|++...... .+.+.+|++.+++++|+||+++++++.. ....++|+||+++++|.+++.
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~-~~~~~l~~e~~~~~~L~~~~~ 79 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFED-EDKLYLVMEYCDGGDLFDLLK 79 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheee-CCEEEEEEeCCCCCCHHHHHH
Confidence 58999999965 5899999999765433 5789999999999999999999998876 468999999999999999987
Q ss_pred ccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcCC--CCccceee
Q 004248 623 RKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGG--DAHQSRIT 700 (766)
Q Consensus 623 ~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~~--~~~~~~~t 700 (766)
.... +++.++..++.+++++++|||+. +|+|+||+|+||++++++.++++|||.+..... ......++
T Consensus 80 ~~~~-------~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~ 149 (244)
T smart00220 80 KRGR-------LSEDEARFYARQILSALEYLHSN---GIIHRDLKPENILLDEDGHVKLADFGLARQLDPGGLLTTFVGT 149 (244)
T ss_pred hccC-------CCHHHHHHHHHHHHHHHHHHHHc---CeecCCcCHHHeEECCCCcEEEccccceeeeccccccccccCC
Confidence 5432 88999999999999999999997 999999999999999999999999999987643 23445677
Q ss_pred ecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 701 RLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 701 ~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
..|++||...... ++.++||||||++++||++|+.||..
T Consensus 150 ~~~~~pE~~~~~~---------~~~~~Di~slG~~l~~l~~~~~p~~~ 188 (244)
T smart00220 150 PEYMAPEVLLGKG---------YGKAVDVWSLGVILYELLTGKPPFPG 188 (244)
T ss_pred cCCCCHHHHccCC---------CCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 8899999775333 46799999999999999999999854
No 399
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.93 E-value=5.9e-27 Score=253.26 Aligned_cols=197 Identities=17% Similarity=0.257 Sum_probs=170.6
Q ss_pred hCCCCccceeecCCcceEEEEE-EcCCcEEEEEEeeccccC-HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEe
Q 004248 533 TGDFSDANLIKNGHSGDLFRGI-LEGGIPVVIKRIDLQSVK-TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYK 610 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~-~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~E 610 (766)
.++|+....+|.|.||.||||+ ...++..|||.++..... ..-..+|+-+++..+|||||.++|-|.. .+..++.||
T Consensus 14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr-~dklwicME 92 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLR-RDKLWICME 92 (829)
T ss_pred ccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhh-hcCcEEEEE
Confidence 4678889999999999999999 577999999999876544 4556789999999999999999997765 467999999
Q ss_pred eCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhc
Q 004248 611 YMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQ 690 (766)
Q Consensus 611 y~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~ 690 (766)
||.+|+|++..+-.+ ++++.++..++++..+|++|||+. +-+|||||=.|||+++.|.+|++|||.+..+
T Consensus 93 ycgggslQdiy~~Tg-------plselqiayvcRetl~gl~ylhs~---gk~hRdiKGanilltd~gDvklaDfgvsaqi 162 (829)
T KOG0576|consen 93 YCGGGSLQDIYHVTG-------PLSELQIAYVCRETLQGLKYLHSQ---GKIHRDIKGANILLTDEGDVKLADFGVSAQI 162 (829)
T ss_pred ecCCCcccceeeecc-------cchhHHHHHHHhhhhccchhhhcC---CcccccccccceeecccCceeecccCchhhh
Confidence 999999999876543 489999999999999999999998 8899999999999999999999999998766
Q ss_pred CC---CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCC
Q 004248 691 GG---DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLN 746 (766)
Q Consensus 691 ~~---~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~ 746 (766)
+. ......||+++||||+-.-+..|. |..++|||+.|+...|+.--++|.
T Consensus 163 tati~KrksfiGtpywmapEvaaverkgg------ynqlcdiwa~gitAiel~eLqppl 215 (829)
T KOG0576|consen 163 TATIAKRKSFIGTPYWMAPEVAAVERKGG------YNQLCDIWALGITAIELGELQPPL 215 (829)
T ss_pred hhhhhhhhcccCCccccchhHHHHHhccc------ccccccccccccchhhhhhcCCcc
Confidence 43 345678999999999765554443 689999999999999998888775
No 400
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.92 E-value=1.1e-25 Score=229.67 Aligned_cols=213 Identities=20% Similarity=0.243 Sum_probs=170.4
Q ss_pred HHHHHHhCCCCccceeecCCcceEEEEEEcC------CcEEEEEEeeccccC--HHHHHHHHHHHhhcCCCCcccceeEE
Q 004248 527 QQLLAATGDFSDANLIKNGHSGDLFRGILEG------GIPVVIKRIDLQSVK--TEAYLLELDFFSKVSHARLVPLLGHC 598 (766)
Q Consensus 527 ~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~~~------g~~vavK~l~~~~~~--~~~~~~E~~~l~~l~H~niv~l~~~~ 598 (766)
+++.....++....++-+|.||.||+|.+.+ .+.|-||.++....+ ...++.|.-.+..+.|||+.++.+++
T Consensus 277 ~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ 356 (563)
T KOG1024|consen 277 QELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVS 356 (563)
T ss_pred HhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEE
Confidence 3444445567777889999999999997543 456788888654433 56799999999999999999999999
Q ss_pred EecCCcEEEEEeeCCCCChhhhhhccCC-CCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCC
Q 004248 599 MERENEKFLVYKYMPNGDLSSSLYRKTN-TEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKF 677 (766)
Q Consensus 599 ~~~~~~~~lV~Ey~~~GsL~~~l~~~~~-~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~ 677 (766)
.+.....+++|.|+.-|+|..+|..-++ .....+.++-.+.+.+|.|++.|++|||++ +|||.||.++|++||+..
T Consensus 357 ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~---~ViHkDiAaRNCvIdd~L 433 (563)
T KOG1024|consen 357 IEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNH---GVIHKDIAARNCVIDDQL 433 (563)
T ss_pred eeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhc---Ccccchhhhhcceehhhe
Confidence 8877788999999999999999984332 123346788889999999999999999998 999999999999999999
Q ss_pred cEEeccchhhhhcC-CCCc----cceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCCCcc
Q 004248 678 EVRLGSLSEVCAQG-GDAH----QSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLSSRF 751 (766)
Q Consensus 678 ~~kl~DFG~a~~~~-~~~~----~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~~~~ 751 (766)
++||+|=.++|..- .+.+ ......-||+||.+.... ++.++|||||||+||||+| |+.|+...++
T Consensus 434 qVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~---------yssasDvWsfGVllWELmtlg~~PyaeIDP 504 (563)
T KOG1024|consen 434 QVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSH---------YSSASDVWSFGVLLWELMTLGKLPYAEIDP 504 (563)
T ss_pred eEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhh---------hcchhhhHHHHHHHHHHHhcCCCCccccCH
Confidence 99999999998652 1111 011123478999887665 5789999999999999998 8999854433
No 401
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.92 E-value=2.1e-26 Score=242.19 Aligned_cols=195 Identities=17% Similarity=0.184 Sum_probs=166.7
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccCHHHHHHHHHHHhhcC------CCCcccceeEEEecCCcEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVKTEAYLLELDFFSKVS------HARLVPLLGHCMERENEKF 606 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~------H~niv~l~~~~~~~~~~~~ 606 (766)
+.|......|+|-|+.|.+|.. ..|..||||+|.......+.=++|+++|++|+ --|+++++-.|+. .++++
T Consensus 432 ~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~h-knHLC 510 (752)
T KOG0670|consen 432 SRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKH-KNHLC 510 (752)
T ss_pred ceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhh-cceeE
Confidence 4577778889999999999994 45789999999877766677788999999995 3478999887665 57899
Q ss_pred EEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCC-CcEEeccch
Q 004248 607 LVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDK-FEVRLGSLS 685 (766)
Q Consensus 607 lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~-~~~kl~DFG 685 (766)
||+|-+. -+|.++|.+.+. ...|.......|+.|+..||..|... +|+|.||||.|||+++. ..+||||||
T Consensus 511 lVFE~Ls-lNLRevLKKyG~----nvGL~ikaVRsYaqQLflALklLK~c---~vlHaDIKPDNiLVNE~k~iLKLCDfG 582 (752)
T KOG0670|consen 511 LVFEPLS-LNLREVLKKYGR----NVGLHIKAVRSYAQQLFLALKLLKKC---GVLHADIKPDNILVNESKNILKLCDFG 582 (752)
T ss_pred EEehhhh-chHHHHHHHhCc----ccceeehHHHHHHHHHHHHHHHHHhc---CeeecccCccceEeccCcceeeeccCc
Confidence 9999886 499999987653 23488888999999999999999986 99999999999999975 569999999
Q ss_pred hhhhcC-CCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCC
Q 004248 686 EVCAQG-GDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLN 746 (766)
Q Consensus 686 ~a~~~~-~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~ 746 (766)
.|.... ...+.+.++++|+|||++.+..|.| ..|+||.||.|||+.||+.-|
T Consensus 583 SA~~~~eneitPYLVSRFYRaPEIiLG~~yd~---------~iD~WSvgctLYElYtGkIlF 635 (752)
T KOG0670|consen 583 SASFASENEITPYLVSRFYRAPEIILGLPYDY---------PIDTWSVGCTLYELYTGKILF 635 (752)
T ss_pred cccccccccccHHHHHHhccCcceeecCcccC---------CccceeeceeeEEeeccceec
Confidence 998774 4567788899999999998877654 569999999999999999877
No 402
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.92 E-value=4.1e-25 Score=259.93 Aligned_cols=184 Identities=19% Similarity=0.218 Sum_probs=153.6
Q ss_pred CCCCccceeecCCcceEEEEEEc-CCcEEEEEEeeccccC----HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGILE-GGIPVVIKRIDLQSVK----TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLV 608 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~----~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV 608 (766)
++|...++||+|+||.||+|... +++.||||+++..... .+.+.+|+.+++.++||||+++++++.. .+..|+|
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~-~~~~~lV 82 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQS-ANNVYLV 82 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEE-CCEEEEE
Confidence 57888999999999999999954 7899999999754322 3578899999999999999999986655 5689999
Q ss_pred EeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhh
Q 004248 609 YKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVC 688 (766)
Q Consensus 609 ~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~ 688 (766)
|||+++|+|.+++...+ .+++...+.|+.||+.||+|||.. +||||||||+|||++.++.+||+|||+++
T Consensus 83 mEy~~g~~L~~li~~~~-------~l~~~~~~~i~~qil~aL~yLH~~---gIiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 83 MEYLIGGDVKSLLHIYG-------YFDEEMAVKYISEVALALDYLHRH---GIIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred EeCCCCCCHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 99999999999997543 388999999999999999999997 99999999999999999999999999998
Q ss_pred hcCC---CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHH
Q 004248 689 AQGG---DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPL 736 (766)
Q Consensus 689 ~~~~---~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl 736 (766)
.... ......+|+.|.+||.......+ ...+++|++|.-.
T Consensus 153 ~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~--------~~~s~~~s~g~~~ 195 (669)
T cd05610 153 VTLNRELNMMDILTTPSMAKPKNDYSRTPG--------QVLSLISSLGFNT 195 (669)
T ss_pred cccCCcccccccccCccccCccccccCCCC--------ceeeeeeecCcCC
Confidence 6532 22345678899999965443332 4567889998543
No 403
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.91 E-value=2.1e-25 Score=231.55 Aligned_cols=203 Identities=17% Similarity=0.180 Sum_probs=164.3
Q ss_pred HHHHhCCCCccceeecCCcceEEEEEEc----CCcEEEEEEeeccccCHHHHHHHHHHHhhcC-CCCcccceeEEEecCC
Q 004248 529 LLAATGDFSDANLIKNGHSGDLFRGILE----GGIPVVIKRIDLQSVKTEAYLLELDFFSKVS-HARLVPLLGHCMEREN 603 (766)
Q Consensus 529 l~~~~~~~~~~~~ig~G~~g~Vy~~~~~----~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~ 603 (766)
+....+.|..+++||+|.|++||+|.+. ..+.||+|.+..... ..+..+|+++|..+. |.||+++.+ |+..++
T Consensus 31 ~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~-p~ri~~El~~L~~~gG~~ni~~~~~-~~rnnd 108 (418)
T KOG1167|consen 31 IPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSS-PSRILNELEMLYRLGGSDNIIKLNG-CFRNND 108 (418)
T ss_pred hhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccC-chHHHHHHHHHHHhccchhhhcchh-hhccCC
Confidence 3445567889999999999999999842 468999999976554 346899999999995 899999998 555577
Q ss_pred cEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCC-CcEEec
Q 004248 604 EKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDK-FEVRLG 682 (766)
Q Consensus 604 ~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~-~~~kl~ 682 (766)
.+.+|+||++.-+..+++.. ++..++..+...+..||+|+|+. +||||||||+|+|.+.. +.-.|.
T Consensus 109 ~v~ivlp~~~H~~f~~l~~~----------l~~~~i~~Yl~~ll~Al~~~h~~---GIvHRDiKpsNFL~n~~t~rg~Lv 175 (418)
T KOG1167|consen 109 QVAIVLPYFEHDRFRDLYRS----------LSLAEIRWYLRNLLKALAHLHKN---GIVHRDIKPSNFLYNRRTQRGVLV 175 (418)
T ss_pred eeEEEecccCccCHHHHHhc----------CCHHHHHHHHHHHHHHhhhhhcc---CccccCCCccccccccccCCceEE
Confidence 89999999999888888752 77888999999999999999998 99999999999999854 668899
Q ss_pred cchhhhhcC---------C-------C-------------------------------CccceeeecccCCCCCCCCcee
Q 004248 683 SLSEVCAQG---------G-------D-------------------------------AHQSRITRLLRLPQSSEQGSSG 715 (766)
Q Consensus 683 DFG~a~~~~---------~-------~-------------------------------~~~~~~t~~y~aPe~~~~~~~g 715 (766)
|||+|...+ . . .....||+.|+|||+......
T Consensus 176 DFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~- 254 (418)
T KOG1167|consen 176 DFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPR- 254 (418)
T ss_pred echhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccC-
Confidence 999997210 0 0 001357888888887654332
Q ss_pred eeeeeeecccccceecchHHHHHHhcCCCCCCCCccccc
Q 004248 716 MVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSSRFGVK 754 (766)
Q Consensus 716 ~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~~~~~~ 754 (766)
-++++||||-|||++-+++++.||+......+
T Consensus 255 -------QttaiDiws~GVI~Lslls~~~PFf~a~dd~~ 286 (418)
T KOG1167|consen 255 -------QTTAIDIWSAGVILLSLLSRRYPFFKAKDDAD 286 (418)
T ss_pred -------cCCccceeeccceeehhhccccccccCccccc
Confidence 47899999999999999999999975544433
No 404
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.91 E-value=1.1e-24 Score=228.43 Aligned_cols=134 Identities=22% Similarity=0.338 Sum_probs=115.2
Q ss_pred CCCCccceeecCCcceEEEEE-EcCCcEEEEEEeeccccCHHHHHHHHHHHhhcC-----C---CCcccceeEEEec---
Q 004248 534 GDFSDANLIKNGHSGDLFRGI-LEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVS-----H---ARLVPLLGHCMER--- 601 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~-----H---~niv~l~~~~~~~--- 601 (766)
++|...++||=|.|++||.|. ..+.+.||+|+++..+.-.+....||++|++++ | .+||+|+++|...
T Consensus 78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGpN 157 (590)
T KOG1290|consen 78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGPN 157 (590)
T ss_pred ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCCC
Confidence 678899999999999999998 577899999999866655778899999999983 3 3699999987643
Q ss_pred CCcEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCC
Q 004248 602 ENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDD 675 (766)
Q Consensus 602 ~~~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~ 675 (766)
+.++++|+||. |-+|..+|..... +.++....++|+.||+.||.|||++| +|||-||||+|||+..
T Consensus 158 G~HVCMVfEvL-GdnLLklI~~s~Y-----rGlpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl~~ 223 (590)
T KOG1290|consen 158 GQHVCMVFEVL-GDNLLKLIKYSNY-----RGLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLLCS 223 (590)
T ss_pred CcEEEEEehhh-hhHHHHHHHHhCC-----CCCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeeeec
Confidence 34799999999 4589999976543 34899999999999999999999997 9999999999999853
No 405
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.90 E-value=9.3e-24 Score=227.04 Aligned_cols=159 Identities=14% Similarity=0.108 Sum_probs=124.4
Q ss_pred HhCCCCccceeecCCcceEEEEEEc--CCcEEEEEEeeccc------cCHHHHHHHHHHHhhcCCCCcccceeEEEecCC
Q 004248 532 ATGDFSDANLIKNGHSGDLFRGILE--GGIPVVIKRIDLQS------VKTEAYLLELDFFSKVSHARLVPLLGHCMEREN 603 (766)
Q Consensus 532 ~~~~~~~~~~ig~G~~g~Vy~~~~~--~g~~vavK~l~~~~------~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~ 603 (766)
..++|...+.||+|+||+||+|... +++.||||++.... ...+.|.+|+++|++++|+|+|+.+.. .+
T Consensus 16 ~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~----~~ 91 (365)
T PRK09188 16 LSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA----TG 91 (365)
T ss_pred ccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE----cC
Confidence 3467999999999999999999853 57888999875331 124569999999999999999964321 13
Q ss_pred cEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCC-CCCCeeeCCCCcEEec
Q 004248 604 EKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDV-QASSILLDDKFEVRLG 682 (766)
Q Consensus 604 ~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDl-Kp~NILl~~~~~~kl~ 682 (766)
..|+||||++|++|.. +.. .. ...++.++++||+|||+. +|+|||| ||+|||++.++++||+
T Consensus 92 ~~~LVmE~~~G~~L~~-~~~----------~~---~~~~~~~i~~aL~~lH~~---gIiHrDL~KP~NILv~~~~~ikLi 154 (365)
T PRK09188 92 KDGLVRGWTEGVPLHL-ARP----------HG---DPAWFRSAHRALRDLHRA---GITHNDLAKPQNWLMGPDGEAAVI 154 (365)
T ss_pred CcEEEEEccCCCCHHH-hCc----------cc---hHHHHHHHHHHHHHHHHC---CCeeCCCCCcceEEEcCCCCEEEE
Confidence 5799999999999963 211 01 135788999999999997 9999999 9999999999999999
Q ss_pred cchhhhhcCCC-----------CccceeeecccCCCCCCC
Q 004248 683 SLSEVCAQGGD-----------AHQSRITRLLRLPQSSEQ 711 (766)
Q Consensus 683 DFG~a~~~~~~-----------~~~~~~t~~y~aPe~~~~ 711 (766)
|||+|+..... .+...+++.|.|||.+..
T Consensus 155 DFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~ 194 (365)
T PRK09188 155 DFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTP 194 (365)
T ss_pred ECccceecccCcchhhhhhhhhhhhhhccCccCCcccCCh
Confidence 99999865322 134456777999996644
No 406
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.90 E-value=6.3e-25 Score=243.78 Aligned_cols=192 Identities=17% Similarity=0.259 Sum_probs=149.1
Q ss_pred CCccceeecCCcce-EEEEEEcCCcEEEEEEeeccccCHHHHHHHHHHHhhc-CCCCcccceeEEEecCCcEEEEEeeCC
Q 004248 536 FSDANLIKNGHSGD-LFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKV-SHARLVPLLGHCMERENEKFLVYKYMP 613 (766)
Q Consensus 536 ~~~~~~ig~G~~g~-Vy~~~~~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~~lV~Ey~~ 613 (766)
|...+++|.|+.|+ ||+|..+ |+.||||++-... ..-..||+..++.- +|||||+.++. ..++...|+..|.|.
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~ye-~R~VAVKrll~e~--~~~A~rEi~lL~eSD~H~NviRyyc~-E~d~qF~YIalELC~ 586 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVYE-GREVAVKRLLEEF--FDFAQREIQLLQESDEHPNVIRYYCS-EQDRQFLYIALELCA 586 (903)
T ss_pred eccHHHcccCCCCcEEEEEeeC-CceehHHHHhhHh--HHHHHHHHHHHHhccCCCceEEEEee-ccCCceEEEEehHhh
Confidence 45567899999885 7999876 5699999985332 23457899999988 59999998752 223457899999998
Q ss_pred CCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCC---C--CcEEeccchhhh
Q 004248 614 NGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDD---K--FEVRLGSLSEVC 688 (766)
Q Consensus 614 ~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~---~--~~~kl~DFG~a~ 688 (766)
. +|.+++..... +.. ...-.....+..|++.||++||+- +||||||||.||||+. + ..|+|+|||+++
T Consensus 587 ~-sL~dlie~~~~-d~~--~~~~i~~~~~l~q~~~GlaHLHsl---~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsK 659 (903)
T KOG1027|consen 587 C-SLQDLIESSGL-DVE--MQSDIDPISVLSQIASGLAHLHSL---KIVHRDLKPQNILISVPSADGTLRAKISDFGLSK 659 (903)
T ss_pred h-hHHHHHhcccc-chh--hcccccHHHHHHHHHHHHHHHHhc---ccccccCCCceEEEEccCCCcceeEEeccccccc
Confidence 5 99999976411 111 111134567888999999999996 9999999999999986 3 469999999998
Q ss_pred hcCCC------CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcC-CCCCC
Q 004248 689 AQGGD------AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFN-NHLNL 747 (766)
Q Consensus 689 ~~~~~------~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG-~~p~~ 747 (766)
..+.. .....||-.|+|||.+..... +.++||+|+|||+|..+|| ++||.
T Consensus 660 kl~~~~sS~~r~s~~sGt~GW~APE~L~~~~~---------~~avDiFslGCvfyYvltgG~HpFG 716 (903)
T KOG1027|consen 660 KLAGGKSSFSRLSGGSGTSGWQAPEQLREDRK---------TQAVDIFSLGCVFYYVLTGGSHPFG 716 (903)
T ss_pred ccCCCcchhhcccCCCCcccccCHHHHhcccc---------CcccchhhcCceEEEEecCCccCCC
Confidence 87432 234568999999998865543 5688999999999999996 99994
No 407
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.90 E-value=3.5e-23 Score=206.96 Aligned_cols=180 Identities=26% Similarity=0.337 Sum_probs=152.9
Q ss_pred eecCCcceEEEEEEc-CCcEEEEEEeeccccC--HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEeeCCCCChh
Q 004248 542 IKNGHSGDLFRGILE-GGIPVVIKRIDLQSVK--TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLS 618 (766)
Q Consensus 542 ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~--~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey~~~GsL~ 618 (766)
||+|++|.||++... +++.+++|+....... .+.+.+|++.+++++|++|+++++++.. ....++++||+++++|.
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~-~~~~~~~~e~~~~~~l~ 79 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFED-ENHLYLVMEYCEGGSLK 79 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeec-CCeEEEEEecCCCCcHH
Confidence 689999999999965 4899999999765543 4679999999999999999999997765 46799999999999999
Q ss_pred hhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCC-CCcEEeccchhhhhcCCC---C
Q 004248 619 SSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDD-KFEVRLGSLSEVCAQGGD---A 694 (766)
Q Consensus 619 ~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~-~~~~kl~DFG~a~~~~~~---~ 694 (766)
+++.... ..+++..+..++.+++++++|||+. +++|+||+|.||+++. ++.++|+|||.+...... .
T Consensus 80 ~~~~~~~------~~~~~~~~~~~~~~l~~~l~~lh~~---~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~ 150 (215)
T cd00180 80 DLLKENE------GKLSEDEILRILLQILEGLEYLHSN---GIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLL 150 (215)
T ss_pred HHHHhcc------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcchh
Confidence 9997542 2489999999999999999999998 9999999999999999 899999999998766433 3
Q ss_pred ccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHH
Q 004248 695 HQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSA 739 (766)
Q Consensus 695 ~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~el 739 (766)
....+...|.+||....... .+.+.|+|++|++++||
T Consensus 151 ~~~~~~~~~~~pe~~~~~~~--------~~~~~D~~~lg~~~~~l 187 (215)
T cd00180 151 KTIVGTPAYMAPEVLLGKGY--------YSEKSDIWSLGVILYEL 187 (215)
T ss_pred hcccCCCCccChhHhcccCC--------CCchhhhHHHHHHHHHH
Confidence 33456778999997754411 46889999999999998
No 408
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.90 E-value=8.5e-26 Score=241.47 Aligned_cols=280 Identities=28% Similarity=0.343 Sum_probs=187.7
Q ss_pred hhccCCCCCEEecCCCCCC-CCCchhhhhCCCCCCEEEccCCCCCccCCcccCCCCCCcEEEeecCcCCCCCCc-cccCC
Q 004248 112 ALVNLTHLASFNASRFLLP-GSIPDWLGQQLPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPS-SLGQL 189 (766)
Q Consensus 112 ~l~~l~~L~~L~ls~n~l~-g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~-~l~~L 189 (766)
.+..|+.||++.+..|++- ..||+.++. |..|++||||+|++. ..|..+.+..++.+|+||+|+|. .||. .+-+|
T Consensus 73 ELs~Lp~LRsv~~R~N~LKnsGiP~diF~-l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~Ie-tIPn~lfinL 149 (1255)
T KOG0444|consen 73 ELSDLPRLRSVIVRDNNLKNSGIPTDIFR-LKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIE-TIPNSLFINL 149 (1255)
T ss_pred hhccchhhHHHhhhccccccCCCCchhcc-cccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccc-cCCchHHHhh
Confidence 3455666666666666552 346766665 777777777777776 45666777777777777777776 3443 34567
Q ss_pred CCCCEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCCCCCCCccEEEccCCCCC-CCCccccCCCCCCCEEE
Q 004248 190 SVLSVLDLSRNSLTGNIPTSFGLLKNLSSLDISSNYLTGSIPPGLGTLSKLQYLNVSNNSLA-SSIPAQLGDLDSLVDLD 268 (766)
Q Consensus 190 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~-~~~p~~l~~l~~L~~L~ 268 (766)
+.|-+||||+|++. .+|+.+..|.+|++|+|++|.+.-.--..+..+++|+.|.+++.+=+ ..+|.++..+.+|..+|
T Consensus 150 tDLLfLDLS~NrLe-~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvD 228 (1255)
T KOG0444|consen 150 TDLLFLDLSNNRLE-MLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVD 228 (1255)
T ss_pred HhHhhhccccchhh-hcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhcc
Confidence 77777777777775 46666667777777777777654322233444556666666654322 35788888888888888
Q ss_pred ccCCcCCccCCcccCCCCCCCEEEccCccCccccCCCccCCCCcccEEEccCCCCCCCCCcccCCCCCCCEEEccCCCCC
Q 004248 269 LSMNSLSGSVPSELRGLRSLQKFVIGNNFLSGNLSVNLFPTVSQLQIIVLRQNGFTGPPPDVLWSMPQLRLLDISRNNFT 348 (766)
Q Consensus 269 Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 348 (766)
+|.|++. .+|+.+-++++|+.|+||+|.|+. +.... ....+|+.|+||.|+++ .+|+.+..+++|+.|.+.+|+++
T Consensus 229 lS~N~Lp-~vPecly~l~~LrrLNLS~N~ite-L~~~~-~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~ 304 (1255)
T KOG0444|consen 229 LSENNLP-IVPECLYKLRNLRRLNLSGNKITE-LNMTE-GEWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLT 304 (1255)
T ss_pred ccccCCC-cchHHHhhhhhhheeccCcCceee-eeccH-HHHhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCccc
Confidence 8888887 778888888888888888888863 22222 34567888888888887 46778888888888888888876
Q ss_pred C-CCCcccccCCCCCcEEEccCCcCccCCCcC---CCCCCEEeccCCcCccccChhhh
Q 004248 349 G-PLPNSRSNVNTSTVELNISQNMFYGGLTPV---LGRFRLVDLSGNYFEGRVPEYVH 402 (766)
Q Consensus 349 g-~~p~~~~~~~~~l~~L~ls~N~l~g~~~~~---l~~l~~ldLs~N~l~g~~p~~~~ 402 (766)
- -||. ..+.+..|..+..++|.+. -+|.. ...|+.|.|++|++- ++|+.++
T Consensus 305 FeGiPS-GIGKL~~Levf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLi-TLPeaIH 359 (1255)
T KOG0444|consen 305 FEGIPS-GIGKLIQLEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLI-TLPEAIH 359 (1255)
T ss_pred ccCCcc-chhhhhhhHHHHhhccccc-cCchhhhhhHHHHHhccccccee-echhhhh
Confidence 2 3553 3455667777777777664 33433 345677777777775 4666654
No 409
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.89 E-value=1.9e-25 Score=238.83 Aligned_cols=299 Identities=27% Similarity=0.386 Sum_probs=237.8
Q ss_pred CEEEEEcCCCCcCCCCCCCCccchhhhccCCCCCEEecCCCCCCCCCchhhhhCCCCCCEEEccCCCCCccCCcccCCCC
Q 004248 87 SVVGINISGFRRTRLGSQNPRFAADALVNLTHLASFNASRFLLPGSIPDWLGQQLPTLQALDLRSCSISGVIPFSLGNLT 166 (766)
Q Consensus 87 ~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~L~ls~n~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~ 166 (766)
-|.++|++++.. .|.- -|.....+++++.|.|.+..+ ..+|+.++. |.+|++|.+++|++. .+-..++.|+
T Consensus 8 FVrGvDfsgNDF--sg~~----FP~~v~qMt~~~WLkLnrt~L-~~vPeEL~~-lqkLEHLs~~HN~L~-~vhGELs~Lp 78 (1255)
T KOG0444|consen 8 FVRGVDFSGNDF--SGDR----FPHDVEQMTQMTWLKLNRTKL-EQVPEELSR-LQKLEHLSMAHNQLI-SVHGELSDLP 78 (1255)
T ss_pred eeecccccCCcC--CCCc----CchhHHHhhheeEEEechhhh-hhChHHHHH-HhhhhhhhhhhhhhH-hhhhhhccch
Confidence 477788887542 1221 234677888999999888776 479999987 999999999999987 3456788899
Q ss_pred CCcEEEeecCcCCC-CCCccccCCCCCCEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCC-CCCCCCccEEE
Q 004248 167 NLTSLYLSDNGLTG-TIPSSLGQLSVLSVLDLSRNSLTGNIPTSFGLLKNLSSLDISSNYLTGSIPPG-LGTLSKLQYLN 244 (766)
Q Consensus 167 ~L~~L~Ls~N~l~~-~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-l~~l~~L~~L~ 244 (766)
.|+.+++.+|++.. -+|..+..|..|..||||+|++. ..|..+..-+++-.|+||+|++. .||.. +.+|+.|-+||
T Consensus 79 ~LRsv~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~Ie-tIPn~lfinLtDLLfLD 156 (1255)
T KOG0444|consen 79 RLRSVIVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIE-TIPNSLFINLTDLLFLD 156 (1255)
T ss_pred hhHHHhhhccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccc-cCCchHHHhhHhHhhhc
Confidence 99999999999853 37888999999999999999997 68999999999999999999998 55654 57899999999
Q ss_pred ccCCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccCCCCCCCEEEccCccCc-cccCCCccCCCCcccEEEccCCCC
Q 004248 245 VSNNSLASSIPAQLGDLDSLVDLDLSMNSLSGSVPSELRGLRSLQKFVIGNNFLS-GNLSVNLFPTVSQLQIIVLRQNGF 323 (766)
Q Consensus 245 Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~-g~~~~~~~~~l~~L~~L~L~~N~l 323 (766)
||+|++. .+|..+..|..|++|+|++|.+.-.--..+..+++|+.|.+++.+-+ ..+|.++ ..+.+|..+|||.|++
T Consensus 157 LS~NrLe-~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsl-d~l~NL~dvDlS~N~L 234 (1255)
T KOG0444|consen 157 LSNNRLE-MLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSL-DDLHNLRDVDLSENNL 234 (1255)
T ss_pred cccchhh-hcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCch-hhhhhhhhccccccCC
Confidence 9999996 57778889999999999999876433344556788888999886544 4567665 7889999999999999
Q ss_pred CCCCCcccCCCCCCCEEEccCCCCCCCCCcccccCCCCCcEEEccCCcCccCCCc---CCCCCCEEeccCCcCcc-ccCh
Q 004248 324 TGPPPDVLWSMPQLRLLDISRNNFTGPLPNSRSNVNTSTVELNISQNMFYGGLTP---VLGRFRLVDLSGNYFEG-RVPE 399 (766)
Q Consensus 324 ~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~L~ls~N~l~g~~~~---~l~~l~~ldLs~N~l~g-~~p~ 399 (766)
. ..|+.+.++++|+.|+||+|+++. +.. ......++..||+|+|+++. +|. .|++|+.|.+.+|+++- -||.
T Consensus 235 p-~vPecly~l~~LrrLNLS~N~ite-L~~-~~~~W~~lEtLNlSrNQLt~-LP~avcKL~kL~kLy~n~NkL~FeGiPS 310 (1255)
T KOG0444|consen 235 P-IVPECLYKLRNLRRLNLSGNKITE-LNM-TEGEWENLETLNLSRNQLTV-LPDAVCKLTKLTKLYANNNKLTFEGIPS 310 (1255)
T ss_pred C-cchHHHhhhhhhheeccCcCceee-eec-cHHHHhhhhhhccccchhcc-chHHHhhhHHHHHHHhccCcccccCCcc
Confidence 6 578899999999999999999983 321 12334578899999999974 443 46788889999998763 4787
Q ss_pred hhh
Q 004248 400 YVH 402 (766)
Q Consensus 400 ~~~ 402 (766)
.++
T Consensus 311 GIG 313 (1255)
T KOG0444|consen 311 GIG 313 (1255)
T ss_pred chh
Confidence 764
No 410
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.88 E-value=1.5e-21 Score=227.56 Aligned_cols=314 Identities=26% Similarity=0.394 Sum_probs=224.4
Q ss_pred CHHHHHHHHHHHHhCCCCC------CCCCCCCCCCCCcc----------------ceeecCCCEEEEEcCCCCcCCC--C
Q 004248 47 SRTELAALFELRSSLGLRR------RDWPRKVDPCLVWN----------------GVRCQNGSVVGINISGFRRTRL--G 102 (766)
Q Consensus 47 ~~~~~~aLl~~k~~l~~~~------~~W~~~~~~C~~W~----------------gv~C~~~~v~~l~l~~~~~~~~--~ 102 (766)
.++|.+.+++..+.|..+. ..|...+|+|- =+ -|.|.++.||.+...+...... +
T Consensus 61 ~~~~~~~~~~~~~~l~~p~~~~~~~~~~~~~~~fc~-~~~~~~~~l~~~~~~~~~tv~~~~~~vt~l~~~g~~~~~~~~~ 139 (754)
T PRK15370 61 SPEEIKSKFECLRMLAFPAYADNIQYSRGGADQYCI-LSENSQEILSIVFNTEGYTVEGGGKSVTYTRVTESEQASSASG 139 (754)
T ss_pred CHHHHHHHHHHHHHhcCCchhhccccccCCCCcccc-cCCcchhhheeeecCCceEEecCCCcccccccccccccccCCC
Confidence 4578899999998886432 35988888883 22 2788877787776655321111 0
Q ss_pred CCCC-ccc------------------hhhh-----ccCCCCCEEecCCCCCCCCCchhhhhCCCCCCEEEccCCCCCccC
Q 004248 103 SQNP-RFA------------------ADAL-----VNLTHLASFNASRFLLPGSIPDWLGQQLPTLQALDLRSCSISGVI 158 (766)
Q Consensus 103 ~~~~-~~~------------------~~~l-----~~l~~L~~L~ls~n~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~ 158 (766)
.... ... ...+ .-..+...|+++++.++ .+|..+ .++|+.|+|++|.++. +
T Consensus 140 ~~~~~~~~~~w~~w~~~~~~~~~~~r~~a~~r~~~Cl~~~~~~L~L~~~~Lt-sLP~~I---p~~L~~L~Ls~N~Lts-L 214 (754)
T PRK15370 140 SKDAVNYELIWSEWVKEAPAKEAANREEAVQRMRDCLKNNKTELRLKILGLT-TIPACI---PEQITTLILDNNELKS-L 214 (754)
T ss_pred CCChhhHHHHHHHHHhcCCCCccccHHHHHHHHHhhcccCceEEEeCCCCcC-cCCccc---ccCCcEEEecCCCCCc-C
Confidence 0000 000 0011 11245678888888776 477655 3578999999999984 5
Q ss_pred CcccCCCCCCcEEEeecCcCCCCCCccccCCCCCCEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCCCCCC
Q 004248 159 PFSLGNLTNLTSLYLSDNGLTGTIPSSLGQLSVLSVLDLSRNSLTGNIPTSFGLLKNLSSLDISSNYLTGSIPPGLGTLS 238 (766)
Q Consensus 159 p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~ 238 (766)
|..+. ++|++|+|++|+|+ .+|..+. .+|+.|+|++|++. .+|..+. ++|+.|+|++|+++ .+|..+. +
T Consensus 215 P~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l~--~ 283 (754)
T PRK15370 215 PENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMELSINRIT-ELPERLP--SALQSLDLFHNKIS-CLPENLP--E 283 (754)
T ss_pred Chhhc--cCCCEEECCCCccc-cCChhhh--ccccEEECcCCccC-cCChhHh--CCCCEEECcCCccC-ccccccC--C
Confidence 65554 58999999999998 5677654 47999999999998 6777764 58999999999998 5777664 5
Q ss_pred CccEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccCCCCCCCEEEccCccCccccCCCccCCCCcccEEEc
Q 004248 239 KLQYLNVSNNSLASSIPAQLGDLDSLVDLDLSMNSLSGSVPSELRGLRSLQKFVIGNNFLSGNLSVNLFPTVSQLQIIVL 318 (766)
Q Consensus 239 ~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~~~~~~~~~l~~L~~L~L 318 (766)
+|+.|+|++|+|++ +|..+. ++|+.|++++|+++. +|..+. ++|+.|++++|.+++ +|..+ .++|+.|++
T Consensus 284 sL~~L~Ls~N~Lt~-LP~~lp--~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~Lt~-LP~~l---~~sL~~L~L 353 (754)
T PRK15370 284 ELRYLSVYDNSIRT-LPAHLP--SGITHLNVQSNSLTA-LPETLP--PGLKTLEAGENALTS-LPASL---PPELQVLDV 353 (754)
T ss_pred CCcEEECCCCcccc-Ccccch--hhHHHHHhcCCcccc-CCcccc--ccceeccccCCcccc-CChhh---cCcccEEEC
Confidence 89999999999985 565443 478999999999985 555443 688999999999885 66544 258899999
Q ss_pred cCCCCCCCCCcccCCCCCCCEEEccCCCCCCCCCcccccCCCCCcEEEccCCcCccCCCcC-------CCCCCEEeccCC
Q 004248 319 RQNGFTGPPPDVLWSMPQLRLLDISRNNFTGPLPNSRSNVNTSTVELNISQNMFYGGLTPV-------LGRFRLVDLSGN 391 (766)
Q Consensus 319 ~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~L~ls~N~l~g~~~~~-------l~~l~~ldLs~N 391 (766)
++|+|+. +|..+ .++|+.|+|++|+|+ .+|... ...|+.|++++|++. .+|.. ++++..++|.+|
T Consensus 354 s~N~L~~-LP~~l--p~~L~~LdLs~N~Lt-~LP~~l---~~sL~~LdLs~N~L~-~LP~sl~~~~~~~~~l~~L~L~~N 425 (754)
T PRK15370 354 SKNQITV-LPETL--PPTITTLDVSRNALT-NLPENL---PAALQIMQASRNNLV-RLPESLPHFRGEGPQPTRIIVEYN 425 (754)
T ss_pred CCCCCCc-CChhh--cCCcCEEECCCCcCC-CCCHhH---HHHHHHHhhccCCcc-cCchhHHHHhhcCCCccEEEeeCC
Confidence 9999985 45544 368999999999998 466433 246888999999987 44532 356788999999
Q ss_pred cCcc
Q 004248 392 YFEG 395 (766)
Q Consensus 392 ~l~g 395 (766)
.|+.
T Consensus 426 pls~ 429 (754)
T PRK15370 426 PFSE 429 (754)
T ss_pred CccH
Confidence 9873
No 411
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.86 E-value=1.5e-21 Score=193.31 Aligned_cols=138 Identities=12% Similarity=0.158 Sum_probs=108.6
Q ss_pred cceeecCCcceEEEEEEcCCcEEEEEEeeccccC----------HHHH-----------------HHHHHHHhhcCCCCc
Q 004248 539 ANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVK----------TEAY-----------------LLELDFFSKVSHARL 591 (766)
Q Consensus 539 ~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~----------~~~~-----------------~~E~~~l~~l~H~ni 591 (766)
...||+|+||.||+|...+|+.||||+++..... ..+| .+|++.+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 3679999999999999879999999999754221 0122 349999999998887
Q ss_pred ccceeEEEecCCcEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhh-ccCCCCCeEecCCCCCC
Q 004248 592 VPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYL-HHECTLPFVHRDVQASS 670 (766)
Q Consensus 592 v~l~~~~~~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yL-H~~~~~~iiHrDlKp~N 670 (766)
.....+.. ...++||||++++++....... ..+++.+...++.|++.+|+|+ |+. +|+||||||+|
T Consensus 82 ~~p~~~~~---~~~~iVmE~i~g~~l~~~~~~~-------~~~~~~~~~~i~~qi~~~L~~l~H~~---giiHrDlkP~N 148 (190)
T cd05147 82 PCPEPILL---KSHVLVMEFIGDDGWAAPRLKD-------APLSESKARELYLQVIQIMRILYQDC---RLVHADLSEYN 148 (190)
T ss_pred CCCcEEEe---cCCEEEEEEeCCCCCcchhhhc-------CCCCHHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHH
Confidence 54443222 2348999999988776543222 2388999999999999999999 565 89999999999
Q ss_pred eeeCCCCcEEeccchhhhhc
Q 004248 671 ILLDDKFEVRLGSLSEVCAQ 690 (766)
Q Consensus 671 ILl~~~~~~kl~DFG~a~~~ 690 (766)
|+++ ++.++|+|||+|...
T Consensus 149 Ili~-~~~v~LiDFG~a~~~ 167 (190)
T cd05147 149 LLYH-DGKLYIIDVSQSVEH 167 (190)
T ss_pred EEEE-CCcEEEEEccccccC
Confidence 9998 478999999999754
No 412
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.85 E-value=9.7e-21 Score=219.39 Aligned_cols=240 Identities=30% Similarity=0.330 Sum_probs=136.5
Q ss_pred CCCCEEecCCCCCCCCCchhhhhCCCCCCEEEccCCCCCccCCcccCCCCCCcEEEeecCcCCCCCCccccCCCCCCEEE
Q 004248 117 THLASFNASRFLLPGSIPDWLGQQLPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPSSLGQLSVLSVLD 196 (766)
Q Consensus 117 ~~L~~L~ls~n~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~ 196 (766)
..-..|+++.+.+. .+|+.+. ++|+.|++++|+++. +|. .+++|++|+|++|+|+ .+|.. .++|+.|+
T Consensus 201 ~~~~~LdLs~~~Lt-sLP~~l~---~~L~~L~L~~N~Lt~-LP~---lp~~Lk~LdLs~N~Lt-sLP~l---p~sL~~L~ 268 (788)
T PRK15387 201 NGNAVLNVGESGLT-TLPDCLP---AHITTLVIPDNNLTS-LPA---LPPELRTLEVSGNQLT-SLPVL---PPGLLELS 268 (788)
T ss_pred CCCcEEEcCCCCCC-cCCcchh---cCCCEEEccCCcCCC-CCC---CCCCCcEEEecCCccC-cccCc---ccccceee
Confidence 44567899999886 6888764 478899999999885 554 2578999999999988 45643 35677888
Q ss_pred ccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCCCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCc
Q 004248 197 LSRNSLTGNIPTSFGLLKNLSSLDISSNYLTGSIPPGLGTLSKLQYLNVSNNSLASSIPAQLGDLDSLVDLDLSMNSLSG 276 (766)
Q Consensus 197 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g 276 (766)
|++|.++ .+|..+ ++|+.|+|++|+++ .+|.. +++|+.|+|++|++++ +|... .+|+.|++++|++++
T Consensus 269 Ls~N~L~-~Lp~lp---~~L~~L~Ls~N~Lt-~LP~~---p~~L~~LdLS~N~L~~-Lp~lp---~~L~~L~Ls~N~L~~ 336 (788)
T PRK15387 269 IFSNPLT-HLPALP---SGLCKLWIFGNQLT-SLPVL---PPGLQELSVSDNQLAS-LPALP---SELCKLWAYNNQLTS 336 (788)
T ss_pred ccCCchh-hhhhch---hhcCEEECcCCccc-ccccc---ccccceeECCCCcccc-CCCCc---ccccccccccCcccc
Confidence 8888776 345432 45667777777776 34542 3567777777777764 33321 235555555565553
Q ss_pred cCCcccCCCCCCCEEEccCccCccccCCCccCCCCcccEEEccCCCCCCCCCcccCCCCCCCEEEccCCCCCCCCCcccc
Q 004248 277 SVPSELRGLRSLQKFVIGNNFLSGNLSVNLFPTVSQLQIIVLRQNGFTGPPPDVLWSMPQLRLLDISRNNFTGPLPNSRS 356 (766)
Q Consensus 277 ~~p~~l~~l~~L~~L~ls~N~l~g~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~ 356 (766)
+|.. ..+|+.|++++|+|++ +|.. ..+|+.|++++|+++. +|.. ..+|+.|++++|+|++ +|..
T Consensus 337 -LP~l---p~~Lq~LdLS~N~Ls~-LP~l----p~~L~~L~Ls~N~L~~-LP~l---~~~L~~LdLs~N~Lt~-LP~l-- 400 (788)
T PRK15387 337 -LPTL---PSGLQELSVSDNQLAS-LPTL----PSELYKLWAYNNRLTS-LPAL---PSGLKELIVSGNRLTS-LPVL-- 400 (788)
T ss_pred -cccc---ccccceEecCCCccCC-CCCC----Ccccceehhhcccccc-Cccc---ccccceEEecCCcccC-CCCc--
Confidence 3321 1345556666655553 3321 1244445555555543 2221 1345555555555542 3321
Q ss_pred cCCCCCcEEEccCCcCccCCCcCCCCCCEEeccCCcCccccChh
Q 004248 357 NVNTSTVELNISQNMFYGGLTPVLGRFRLVDLSGNYFEGRVPEY 400 (766)
Q Consensus 357 ~~~~~l~~L~ls~N~l~g~~~~~l~~l~~ldLs~N~l~g~~p~~ 400 (766)
...+..|++++|.+++ +|....+|+.|+|++|+|+ .+|..
T Consensus 401 --~s~L~~LdLS~N~Lss-IP~l~~~L~~L~Ls~NqLt-~LP~s 440 (788)
T PRK15387 401 --PSELKELMVSGNRLTS-LPMLPSGLLSLSVYRNQLT-RLPES 440 (788)
T ss_pred --ccCCCEEEccCCcCCC-CCcchhhhhhhhhccCccc-ccChH
Confidence 1344455555555442 3433344444555555544 34443
No 413
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.85 E-value=3.6e-22 Score=240.67 Aligned_cols=144 Identities=15% Similarity=0.100 Sum_probs=111.2
Q ss_pred hcCC-CCcccceeEEEe------cCCcEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCC
Q 004248 585 KVSH-ARLVPLLGHCME------RENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHEC 657 (766)
Q Consensus 585 ~l~H-~niv~l~~~~~~------~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~ 657 (766)
.++| +||++++++|.. .....+.++||++ ++|.++|.... ..+++.+++.|+.||++||+|||++
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-~~L~~~l~~~~------~~~~~~~~~~i~~qi~~al~~lH~~- 99 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECED-VSLRQWLDNPD------RSVDAFECFHVFRQIVEIVNAAHSQ- 99 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccCC-ccHHHHHhccc------ccccHHHHHHHHHHHHHHHHHHHhC-
Confidence 3455 578888886611 1235788899885 69999997432 2489999999999999999999997
Q ss_pred CCCeEecCCCCCCeeeCC-------------------CCcEEeccchhhhhcCCC-------------------Ccccee
Q 004248 658 TLPFVHRDVQASSILLDD-------------------KFEVRLGSLSEVCAQGGD-------------------AHQSRI 699 (766)
Q Consensus 658 ~~~iiHrDlKp~NILl~~-------------------~~~~kl~DFG~a~~~~~~-------------------~~~~~~ 699 (766)
+||||||||+||||+. ++.+|++|||+++..... .....+
T Consensus 100 --gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 177 (793)
T PLN00181 100 --GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAME 177 (793)
T ss_pred --CeeeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCC
Confidence 9999999999999954 456777788877642110 011357
Q ss_pred eecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCC
Q 004248 700 TRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNL 747 (766)
Q Consensus 700 t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~ 747 (766)
|++|+|||.+.... ++.++|||||||++|||++|..|+.
T Consensus 178 t~~Y~APE~~~~~~---------~~~~sDVwSlGviL~ELl~~~~~~~ 216 (793)
T PLN00181 178 MSWYTSPEEDNGSS---------SNCASDVYRLGVLLFELFCPVSSRE 216 (793)
T ss_pred CcceEChhhhccCC---------CCchhhhhhHHHHHHHHhhCCCchh
Confidence 88999999876544 4789999999999999999998874
No 414
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.85 E-value=8.5e-21 Score=188.41 Aligned_cols=138 Identities=13% Similarity=0.134 Sum_probs=111.1
Q ss_pred cceeecCCcceEEEEEEcCCcEEEEEEeeccccC---------------------------HHHHHHHHHHHhhcCCCCc
Q 004248 539 ANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVK---------------------------TEAYLLELDFFSKVSHARL 591 (766)
Q Consensus 539 ~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~---------------------------~~~~~~E~~~l~~l~H~ni 591 (766)
...||+|+||.||+|...+|+.||||.++..... ...+.+|.+.+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 4689999999999999778999999998754210 1124679999999999998
Q ss_pred ccceeEEEecCCcEEEEEeeCCCCChhhh-hhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhcc-CCCCCeEecCCCCC
Q 004248 592 VPLLGHCMERENEKFLVYKYMPNGDLSSS-LYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHH-ECTLPFVHRDVQAS 669 (766)
Q Consensus 592 v~l~~~~~~~~~~~~lV~Ey~~~GsL~~~-l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~iiHrDlKp~ 669 (766)
.....+... ..++||||++++++... +.+ ..++..+...++.|++.++.|+|+ . +|+||||||+
T Consensus 82 ~~p~~~~~~---~~~lVmE~~~g~~~~~~~l~~--------~~~~~~~~~~i~~~l~~~l~~lH~~~---givHrDlkP~ 147 (190)
T cd05145 82 PVPEPILLK---KNVLVMEFIGDDGSPAPRLKD--------VPLEEEEAEELYEQVVEQMRRLYQEA---GLVHGDLSEY 147 (190)
T ss_pred CCceEEEec---CCEEEEEEecCCCchhhhhhh--------ccCCHHHHHHHHHHHHHHHHHHHHhC---CEecCCCChh
Confidence 655544332 34899999998865443 322 136788889999999999999999 7 9999999999
Q ss_pred CeeeCCCCcEEeccchhhhhcC
Q 004248 670 SILLDDKFEVRLGSLSEVCAQG 691 (766)
Q Consensus 670 NILl~~~~~~kl~DFG~a~~~~ 691 (766)
||+++ +++++|+|||+++...
T Consensus 148 NIll~-~~~~~liDFG~a~~~~ 168 (190)
T cd05145 148 NILYH-DGKPYIIDVSQAVELD 168 (190)
T ss_pred hEEEE-CCCEEEEEcccceecC
Confidence 99999 8999999999997653
No 415
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.84 E-value=1.2e-19 Score=225.58 Aligned_cols=279 Identities=19% Similarity=0.224 Sum_probs=172.6
Q ss_pred hhhccCCCCCEEecCCCC------CCCCCchhhhhCCCCCCEEEccCCCCCccCCcccCCCCCCcEEEeecCcCCCCCCc
Q 004248 111 DALVNLTHLASFNASRFL------LPGSIPDWLGQQLPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPS 184 (766)
Q Consensus 111 ~~l~~l~~L~~L~ls~n~------l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~ 184 (766)
.++..+.+|+.|.+..+. ....+|..+..-..+|+.|++.+|.+. .+|..| .+.+|+.|+|++|++. .+|.
T Consensus 552 ~aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~-~L~~ 628 (1153)
T PLN03210 552 NAFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLE-KLWD 628 (1153)
T ss_pred HHHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcC-CccCCcEEECcCcccc-cccc
Confidence 456667777777665432 223345444331234666666655553 344444 3455666666666554 3455
Q ss_pred cccCCCCCCEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCCCCCCCccEEEccCCCCCCCCccccCCCCCC
Q 004248 185 SLGQLSVLSVLDLSRNSLTGNIPTSFGLLKNLSSLDISSNYLTGSIPPGLGTLSKLQYLNVSNNSLASSIPAQLGDLDSL 264 (766)
Q Consensus 185 ~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L 264 (766)
.+..+++|+.|+|++|...+.+|. ++.+++|+.|+|++|.....+|..++++++|+.|++++|.....+|..+ ++++|
T Consensus 629 ~~~~l~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i-~l~sL 706 (1153)
T PLN03210 629 GVHSLTGLRNIDLRGSKNLKEIPD-LSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI-NLKSL 706 (1153)
T ss_pred ccccCCCCCEEECCCCCCcCcCCc-cccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC-CCCCC
Confidence 555566666666655543344442 5555566666666555444555555666666666665554444455443 45555
Q ss_pred CEEEccCCcCCccCCcccCCCCCCCEEEccCccCccccCCC-----------------------------ccCCCCcccE
Q 004248 265 VDLDLSMNSLSGSVPSELRGLRSLQKFVIGNNFLSGNLSVN-----------------------------LFPTVSQLQI 315 (766)
Q Consensus 265 ~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~~~~~-----------------------------~~~~l~~L~~ 315 (766)
+.|++++|...+.+|.. .++|+.|++++|.+. .+|.. .+...++|+.
T Consensus 707 ~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~-~lP~~~~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~sL~~ 782 (1153)
T PLN03210 707 YRLNLSGCSRLKSFPDI---STNISWLDLDETAIE-EFPSNLRLENLDELILCEMKSEKLWERVQPLTPLMTMLSPSLTR 782 (1153)
T ss_pred CEEeCCCCCCccccccc---cCCcCeeecCCCccc-cccccccccccccccccccchhhccccccccchhhhhccccchh
Confidence 55555555444444432 234455555555443 22211 1122457899
Q ss_pred EEccCCCCCCCCCcccCCCCCCCEEEccCCCCCCCCCcccccCCCCCcEEEccCCcCccCCCcCCCCCCEEeccCCcCcc
Q 004248 316 IVLRQNGFTGPPPDVLWSMPQLRLLDISRNNFTGPLPNSRSNVNTSTVELNISQNMFYGGLTPVLGRFRLVDLSGNYFEG 395 (766)
Q Consensus 316 L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~L~ls~N~l~g~~~~~l~~l~~ldLs~N~l~g 395 (766)
|+|++|...+.+|..++++++|+.|++++|+..+.+|... .+++|+.|++++|.....+|....+++.|+|++|.++
T Consensus 783 L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~--~L~sL~~L~Ls~c~~L~~~p~~~~nL~~L~Ls~n~i~- 859 (1153)
T PLN03210 783 LFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI--NLESLESLDLSGCSRLRTFPDISTNISDLNLSRTGIE- 859 (1153)
T ss_pred eeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC--CccccCEEECCCCCccccccccccccCEeECCCCCCc-
Confidence 9999999888899999999999999999987667888644 5688999999998777778877789999999999997
Q ss_pred ccChhh
Q 004248 396 RVPEYV 401 (766)
Q Consensus 396 ~~p~~~ 401 (766)
.+|.++
T Consensus 860 ~iP~si 865 (1153)
T PLN03210 860 EVPWWI 865 (1153)
T ss_pred cChHHH
Confidence 577765
No 416
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.84 E-value=5.5e-24 Score=218.11 Aligned_cols=242 Identities=31% Similarity=0.477 Sum_probs=119.1
Q ss_pred CCCCCEEEccCCCCCccCCcccCCCCCCcEEEeecCcCCCCCCccccCCCCCCEEEccCCCCCCCCCcccCCCCCCCEEe
Q 004248 141 LPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPSSLGQLSVLSVLDLSRNSLTGNIPTSFGLLKNLSSLD 220 (766)
Q Consensus 141 l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 220 (766)
|..|.+|++++|.++ ..|++++.+..++.|+.++|+++ .+|+.++.+.+|..|+.++|.+. .+|++++.+..|+.|+
T Consensus 67 L~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~s~n~~~-el~~~i~~~~~l~dl~ 143 (565)
T KOG0472|consen 67 LACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPEQIGSLISLVKLDCSSNELK-ELPDSIGRLLDLEDLD 143 (565)
T ss_pred ccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccHHHhhhhhhhhhhcccccee-ecCchHHHHhhhhhhh
Confidence 444455555555544 23444455555555555555544 44455555555555555555544 3444444555555555
Q ss_pred ccCCcCCCCCCCCCCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccCCCCCCCEEEccCccCcc
Q 004248 221 ISSNYLTGSIPPGLGTLSKLQYLNVSNNSLASSIPAQLGDLDSLVDLDLSMNSLSGSVPSELRGLRSLQKFVIGNNFLSG 300 (766)
Q Consensus 221 Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g 300 (766)
..+|+++ .+|++++++.+|..|++.+|++....|..+ +++.|++||...|-+. .+|+.++.+.+|+.|++..|++.
T Consensus 144 ~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~~l~~~~i-~m~~L~~ld~~~N~L~-tlP~~lg~l~~L~~LyL~~Nki~- 219 (565)
T KOG0472|consen 144 ATNNQIS-SLPEDMVNLSKLSKLDLEGNKLKALPENHI-AMKRLKHLDCNSNLLE-TLPPELGGLESLELLYLRRNKIR- 219 (565)
T ss_pred ccccccc-cCchHHHHHHHHHHhhccccchhhCCHHHH-HHHHHHhcccchhhhh-cCChhhcchhhhHHHHhhhcccc-
Confidence 5555544 344445555555555555555543333322 2455555555554443 44555555555555555555543
Q ss_pred ccCCCccCCCCcccEEEccCCCCCCCCCcccCCCCCCCEEEccCCCCCCCCCcccccCCCCCcEEEccCCcCccCCCcCC
Q 004248 301 NLSVNLFPTVSQLQIIVLRQNGFTGPPPDVLWSMPQLRLLDISRNNFTGPLPNSRSNVNTSTVELNISQNMFYGGLTPVL 380 (766)
Q Consensus 301 ~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~L~ls~N~l~g~~~~~l 380 (766)
.+| .|++++.|..|+++.|++.-.+.+-..++++|..|||..|++. +.|+.. ..+.+|..||+|+|.+++ +|..+
T Consensus 220 ~lP--ef~gcs~L~Elh~g~N~i~~lpae~~~~L~~l~vLDLRdNklk-e~Pde~-clLrsL~rLDlSNN~is~-Lp~sL 294 (565)
T KOG0472|consen 220 FLP--EFPGCSLLKELHVGENQIEMLPAEHLKHLNSLLVLDLRDNKLK-EVPDEI-CLLRSLERLDLSNNDISS-LPYSL 294 (565)
T ss_pred cCC--CCCccHHHHHHHhcccHHHhhHHHHhcccccceeeeccccccc-cCchHH-HHhhhhhhhcccCCcccc-CCccc
Confidence 233 2345555555555555554433333445555555555555555 444332 233445555555555543 33333
Q ss_pred C--CCCEEeccCCcCc
Q 004248 381 G--RFRLVDLSGNYFE 394 (766)
Q Consensus 381 ~--~l~~ldLs~N~l~ 394 (766)
+ .|+.|-+.+|.+.
T Consensus 295 gnlhL~~L~leGNPlr 310 (565)
T KOG0472|consen 295 GNLHLKFLALEGNPLR 310 (565)
T ss_pred ccceeeehhhcCCchH
Confidence 3 3566777777764
No 417
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.84 E-value=8.2e-24 Score=216.83 Aligned_cols=248 Identities=29% Similarity=0.437 Sum_probs=219.7
Q ss_pred hhhccCCCCCEEecCCCCCCCCCchhhhhCCCCCCEEEccCCCCCccCCcccCCCCCCcEEEeecCcCCCCCCccccCCC
Q 004248 111 DALVNLTHLASFNASRFLLPGSIPDWLGQQLPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPSSLGQLS 190 (766)
Q Consensus 111 ~~l~~l~~L~~L~ls~n~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~ 190 (766)
..+.+|..|..+++.+|.+. ++|+.++. +..++.|+.++|+++ .+|+.++++.+|+.|+.++|.+. .+|++++.+.
T Consensus 62 ~dl~nL~~l~vl~~~~n~l~-~lp~aig~-l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~s~n~~~-el~~~i~~~~ 137 (565)
T KOG0472|consen 62 EDLKNLACLTVLNVHDNKLS-QLPAAIGE-LEALKSLNVSHNKLS-ELPEQIGSLISLVKLDCSSNELK-ELPDSIGRLL 137 (565)
T ss_pred HhhhcccceeEEEeccchhh-hCCHHHHH-HHHHHHhhcccchHh-hccHHHhhhhhhhhhhcccccee-ecCchHHHHh
Confidence 35778999999999999885 68889987 999999999999998 68899999999999999999998 7889999999
Q ss_pred CCCEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCCCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEcc
Q 004248 191 VLSVLDLSRNSLTGNIPTSFGLLKNLSSLDISSNYLTGSIPPGLGTLSKLQYLNVSNNSLASSIPAQLGDLDSLVDLDLS 270 (766)
Q Consensus 191 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls 270 (766)
.|+.|+..+|+++ ..|+.+.++.+|..|++.+|++.. +|+..-+++.|+.||...|-+. .+|..++.+.+|+-|+|.
T Consensus 138 ~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~~-l~~~~i~m~~L~~ld~~~N~L~-tlP~~lg~l~~L~~LyL~ 214 (565)
T KOG0472|consen 138 DLEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLKA-LPENHIAMKRLKHLDCNSNLLE-TLPPELGGLESLELLYLR 214 (565)
T ss_pred hhhhhhccccccc-cCchHHHHHHHHHHhhccccchhh-CCHHHHHHHHHHhcccchhhhh-cCChhhcchhhhHHHHhh
Confidence 9999999999998 689999999999999999999995 4555555999999999999885 789999999999999999
Q ss_pred CCcCCccCCcccCCCCCCCEEEccCccCccccCCCccCCCCcccEEEccCCCCCCCCCcccCCCCCCCEEEccCCCCCCC
Q 004248 271 MNSLSGSVPSELRGLRSLQKFVIGNNFLSGNLSVNLFPTVSQLQIIVLRQNGFTGPPPDVLWSMPQLRLLDISRNNFTGP 350 (766)
Q Consensus 271 ~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ 350 (766)
.|++. .+| +|.++..|.+|+++.|++. .+|......+.+|.+|||+.|+++. .|+.+.-+.+|.+||+|+|.+++.
T Consensus 215 ~Nki~-~lP-ef~gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRdNklke-~Pde~clLrsL~rLDlSNN~is~L 290 (565)
T KOG0472|consen 215 RNKIR-FLP-EFPGCSLLKELHVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLKE-VPDEICLLRSLERLDLSNNDISSL 290 (565)
T ss_pred hcccc-cCC-CCCccHHHHHHHhcccHHH-hhHHHHhcccccceeeecccccccc-CchHHHHhhhhhhhcccCCccccC
Confidence 99997 667 8999999999999999997 6888888899999999999999985 677788899999999999999964
Q ss_pred CCcccccCCCCCcEEEccCCcC
Q 004248 351 LPNSRSNVNTSTVELNISQNMF 372 (766)
Q Consensus 351 ~p~~~~~~~~~l~~L~ls~N~l 372 (766)
.+ ... .+ .|..|-+-+|.+
T Consensus 291 p~-sLg-nl-hL~~L~leGNPl 309 (565)
T KOG0472|consen 291 PY-SLG-NL-HLKFLALEGNPL 309 (565)
T ss_pred Cc-ccc-cc-eeeehhhcCCch
Confidence 44 333 33 677788888865
No 418
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.83 E-value=1.3e-20 Score=219.80 Aligned_cols=272 Identities=24% Similarity=0.368 Sum_probs=207.9
Q ss_pred eeecCCCEEEEEcCCCCcCCCCCCCCccchhhhccCCCCCEEecCCCCCCCCCchhhhhCCCCCCEEEccCCCCCccCCc
Q 004248 81 VRCQNGSVVGINISGFRRTRLGSQNPRFAADALVNLTHLASFNASRFLLPGSIPDWLGQQLPTLQALDLRSCSISGVIPF 160 (766)
Q Consensus 81 v~C~~~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~L~ls~n~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~ 160 (766)
..|-....+.+++++...+.+ +.. + .++|+.|++++|.+. .+|..+ .++|++|+|++|.|+. +|.
T Consensus 173 ~~Cl~~~~~~L~L~~~~LtsL---P~~-----I--p~~L~~L~Ls~N~Lt-sLP~~l---~~nL~~L~Ls~N~Lts-LP~ 237 (754)
T PRK15370 173 RDCLKNNKTELRLKILGLTTI---PAC-----I--PEQITTLILDNNELK-SLPENL---QGNIKTLYANSNQLTS-IPA 237 (754)
T ss_pred HhhcccCceEEEeCCCCcCcC---Ccc-----c--ccCCcEEEecCCCCC-cCChhh---ccCCCEEECCCCcccc-CCh
Confidence 356555678888887554322 211 1 246899999999987 688876 4589999999999984 576
Q ss_pred ccCCCCCCcEEEeecCcCCCCCCccccCCCCCCEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCCCCCCCc
Q 004248 161 SLGNLTNLTSLYLSDNGLTGTIPSSLGQLSVLSVLDLSRNSLTGNIPTSFGLLKNLSSLDISSNYLTGSIPPGLGTLSKL 240 (766)
Q Consensus 161 ~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L 240 (766)
.+. .+|+.|+|++|+++ .+|..+. ++|+.|+|++|+++ .+|..+. ++|+.|+|++|++++ +|..+. ++|
T Consensus 238 ~l~--~~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt~-LP~~lp--~sL 306 (754)
T PRK15370 238 TLP--DTIQEMELSINRIT-ELPERLP--SALQSLDLFHNKIS-CLPENLP--EELRYLSVYDNSIRT-LPAHLP--SGI 306 (754)
T ss_pred hhh--ccccEEECcCCccC-cCChhHh--CCCCEEECcCCccC-ccccccC--CCCcEEECCCCcccc-Ccccch--hhH
Confidence 553 47999999999998 6787775 58999999999998 5787764 589999999999984 676553 579
Q ss_pred cEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccCCCCCCCEEEccCccCccccCCCccCCCCcccEEEccC
Q 004248 241 QYLNVSNNSLASSIPAQLGDLDSLVDLDLSMNSLSGSVPSELRGLRSLQKFVIGNNFLSGNLSVNLFPTVSQLQIIVLRQ 320 (766)
Q Consensus 241 ~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~~~~~~~~~l~~L~~L~L~~ 320 (766)
+.|++++|+++. +|..+. ++|+.|++++|.+++ +|..+. ++|+.|++++|+|+ .+|..+ .++|+.|+|++
T Consensus 307 ~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~L~-~LP~~l---p~~L~~LdLs~ 376 (754)
T PRK15370 307 THLNVQSNSLTA-LPETLP--PGLKTLEAGENALTS-LPASLP--PELQVLDVSKNQIT-VLPETL---PPTITTLDVSR 376 (754)
T ss_pred HHHHhcCCcccc-CCcccc--ccceeccccCCcccc-CChhhc--CcccEEECCCCCCC-cCChhh---cCCcCEEECCC
Confidence 999999999985 565543 689999999999985 676664 79999999999997 466544 25899999999
Q ss_pred CCCCCCCCcccCCCCCCCEEEccCCCCCCCCCcccc---cCCCCCcEEEccCCcCccCCCcCCCCCCEEeccCCcCccc
Q 004248 321 NGFTGPPPDVLWSMPQLRLLDISRNNFTGPLPNSRS---NVNTSTVELNISQNMFYGGLTPVLGRFRLVDLSGNYFEGR 396 (766)
Q Consensus 321 N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~---~~~~~l~~L~ls~N~l~g~~~~~l~~l~~ldLs~N~l~g~ 396 (766)
|+|+..++ .+. .+|+.|++++|+|+ .+|.... ...+.+..|++.+|.++. ..+.+|+.+ ++.|.+.|.
T Consensus 377 N~Lt~LP~-~l~--~sL~~LdLs~N~L~-~LP~sl~~~~~~~~~l~~L~L~~Npls~---~tl~~L~~L-l~s~~~~gp 447 (754)
T PRK15370 377 NALTNLPE-NLP--AALQIMQASRNNLV-RLPESLPHFRGEGPQPTRIIVEYNPFSE---RTIQNMQRL-MSSVGYQGP 447 (754)
T ss_pred CcCCCCCH-hHH--HHHHHHhhccCCcc-cCchhHHHHhhcCCCccEEEeeCCCccH---HHHHHHHHh-hhcccccCC
Confidence 99996544 443 47999999999998 6665332 234677899999999874 234555555 555666554
No 419
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.83 E-value=3.9e-20 Score=197.74 Aligned_cols=198 Identities=20% Similarity=0.216 Sum_probs=162.5
Q ss_pred CCccceeecCCcceEEEEEEcCCcEEEEEEeeccccC----HHHHHHHHHHHhhcCCC-CcccceeEEEecCCcEEEEEe
Q 004248 536 FSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVK----TEAYLLELDFFSKVSHA-RLVPLLGHCMERENEKFLVYK 610 (766)
Q Consensus 536 ~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~----~~~~~~E~~~l~~l~H~-niv~l~~~~~~~~~~~~lV~E 610 (766)
|...+.+|.|+||.||++... ..+|+|.+...... .+.|.+|+.+++.+.|+ +|+++.+++.. ....++++|
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~ 78 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQD-EGSLYLVME 78 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEec-CCEEEEEEe
Confidence 566788999999999999977 78999999654432 56799999999999988 79999997743 445799999
Q ss_pred eCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCC-cEEeccchhhhh
Q 004248 611 YMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKF-EVRLGSLSEVCA 689 (766)
Q Consensus 611 y~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~-~~kl~DFG~a~~ 689 (766)
|+.++++.+++...... ..+.......++.|++.+++|+|+. +++|||+||+||+++..+ .+|++|||.++.
T Consensus 79 ~~~~~~l~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~~H~~---~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~ 151 (384)
T COG0515 79 YVDGGSLEDLLKKIGRK----GPLSESEALFILAQILSALEYLHSK---GIIHRDIKPENILLDRDGRVVKLIDFGLAKL 151 (384)
T ss_pred cCCCCcHHHHHHhcccc----cCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeecCCCCeEEEeccCccee
Confidence 99999999777643210 2488889999999999999999998 899999999999999988 799999999975
Q ss_pred cCC---------CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 690 QGG---------DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 690 ~~~---------~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
... ......+|..|++||........+ .+...|+||+|++++++++|+.||...
T Consensus 152 ~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~------~~~~~D~~s~g~~~~~~~~~~~p~~~~ 214 (384)
T COG0515 152 LPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAY------ASSSSDIWSLGITLYELLTGLPPFEGE 214 (384)
T ss_pred cCCCCccccccccccccccccccCCHHHhcCCCCCC------CCchHhHHHHHHHHHHHHhCCCCCCCC
Confidence 532 235667899999999876531001 467899999999999999999997443
No 420
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.83 E-value=7.9e-21 Score=190.24 Aligned_cols=170 Identities=12% Similarity=0.061 Sum_probs=128.6
Q ss_pred hCCCCccceeecCCcceEEEEEEcCCcEEEEEEeeccccCHH----H------HHHHHHHHhhcCCCCcccceeEEEecC
Q 004248 533 TGDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTE----A------YLLELDFFSKVSHARLVPLLGHCMERE 602 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~----~------~~~E~~~l~~l~H~niv~l~~~~~~~~ 602 (766)
.++|...+++|+|+||.||.+.. ++..+|||.+.......+ . +.+|++.+.+++||+|....+++...+
T Consensus 30 ~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~ 108 (232)
T PRK10359 30 SYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAE 108 (232)
T ss_pred hCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeecc
Confidence 46799999999999999999655 577899999965443322 2 689999999999999999998755322
Q ss_pred -------CcEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCC
Q 004248 603 -------NEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDD 675 (766)
Q Consensus 603 -------~~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~ 675 (766)
+..++||||++|.+|.++.. ++. ....+++.++..+|+. +++|||+||+||++++
T Consensus 109 ~~~~~~~~~~~lvmEyi~G~tL~~~~~-----------~~~----~~~~~i~~~l~~lH~~---gi~H~Dikp~Nili~~ 170 (232)
T PRK10359 109 RKTLRYAHTYIMLIEYIEGVELNDMPE-----------ISE----DVKAKIKASIESLHQH---GMVSGDPHKGNFIVSK 170 (232)
T ss_pred cccccccCCeEEEEEEECCccHHHhhh-----------ccH----HHHHHHHHHHHHHHHc---CCccCCCChHHEEEeC
Confidence 35799999999999987631 222 2456899999999998 9999999999999999
Q ss_pred CCcEEeccchhhhhcCCCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHh
Q 004248 676 KFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAI 740 (766)
Q Consensus 676 ~~~~kl~DFG~a~~~~~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ell 740 (766)
++ ++++|||..+....+... +.+.... .++.++|+|||||.+.-..
T Consensus 171 ~g-i~liDfg~~~~~~e~~a~----------d~~vler--------~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 171 NG-LRIIDLSGKRCTAQRKAK----------DRIDLER--------HYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred CC-EEEEECCCcccccchhhH----------HHHHHHh--------HhcccccccceeEeehHHH
Confidence 88 999999987644211111 0011111 1356899999999887543
No 421
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.81 E-value=5.7e-20 Score=180.01 Aligned_cols=183 Identities=13% Similarity=0.054 Sum_probs=133.1
Q ss_pred CccceeecCCcceEEEEEEcCCcEEEEEEeeccccC-----HHHHHHHHHHHhhcC-CCCcccceeEEEecCCcEEEEEe
Q 004248 537 SDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVK-----TEAYLLELDFFSKVS-HARLVPLLGHCMERENEKFLVYK 610 (766)
Q Consensus 537 ~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~-----~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~~lV~E 610 (766)
.....+++|+||+||.+.. ++.+++.+.+....-- ...|.+|+++|++++ |++|.+++++ +..+++||
T Consensus 5 ~~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~-----~~~~lvme 78 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW-----DGRHLDRS 78 (218)
T ss_pred ccceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE-----cCEEEEEe
Confidence 3467899999999997665 6778888887654331 235889999999995 5889888874 24699999
Q ss_pred eCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCC-CCCCeeeCCCCcEEeccchhhhh
Q 004248 611 YMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDV-QASSILLDDKFEVRLGSLSEVCA 689 (766)
Q Consensus 611 y~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDl-Kp~NILl~~~~~~kl~DFG~a~~ 689 (766)
|++|.+|.+.+.. ....++.|++++|+|+|+. +|+|||| ||+|||++.++.++|+|||+|..
T Consensus 79 yI~G~~L~~~~~~--------------~~~~~~~qi~~~L~~lH~~---GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~ 141 (218)
T PRK12274 79 YLAGAAMYQRPPR--------------GDLAYFRAARRLLQQLHRC---GVAHNDLAKEANWLVQEDGSPAVIDFQLAVR 141 (218)
T ss_pred eecCccHHhhhhh--------------hhHHHHHHHHHHHHHHHHC---cCccCCCCCcceEEEcCCCCEEEEECCCcee
Confidence 9999888654311 1134778999999999998 9999999 79999999999999999999985
Q ss_pred cCCCCc----------------cceeeecccCCCCCCCCceeeeeeeeecc-cccceecchHHHHHHhcCCCCCCCCc
Q 004248 690 QGGDAH----------------QSRITRLLRLPQSSEQGSSGMVIYLFIIF-TIFHIYFHGNPLFSAIFNNHLNLSSR 750 (766)
Q Consensus 690 ~~~~~~----------------~~~~t~~y~aPe~~~~~~~g~~~~~~~~~-~~~Dv~s~Gvvl~elltG~~p~~~~~ 750 (766)
...... ....++.|.+|+-...-. +.+ ...++++-|.-+|.++||+.|+.+..
T Consensus 142 ~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~--------~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~ 211 (218)
T PRK12274 142 GNPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLK--------RTSWIRELWFATGKPVYRFVTRRVLHWEDN 211 (218)
T ss_pred cCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhc--------cchhHHHHHHHhcchHHHHHhccCCccccC
Confidence 432221 011233333333111000 011 46799999999999999999885443
No 422
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.81 E-value=4.4e-19 Score=205.71 Aligned_cols=237 Identities=29% Similarity=0.342 Sum_probs=185.2
Q ss_pred CCCCEEEccCCCCCccCCcccCCCCCCcEEEeecCcCCCCCCccccCCCCCCEEEccCCCCCCCCCcccCCCCCCCEEec
Q 004248 142 PTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPSSLGQLSVLSVLDLSRNSLTGNIPTSFGLLKNLSSLDI 221 (766)
Q Consensus 142 ~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 221 (766)
..-..|||++|.++ .+|..+. ++|+.|+|++|+++ .+|.. +++|++|+|++|+++. +|.. .++|+.|+|
T Consensus 201 ~~~~~LdLs~~~Lt-sLP~~l~--~~L~~L~L~~N~Lt-~LP~l---p~~Lk~LdLs~N~Lts-LP~l---p~sL~~L~L 269 (788)
T PRK15387 201 NGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPAL---PPELRTLEVSGNQLTS-LPVL---PPGLLELSI 269 (788)
T ss_pred CCCcEEEcCCCCCC-cCCcchh--cCCCEEEccCCcCC-CCCCC---CCCCcEEEecCCccCc-ccCc---ccccceeec
Confidence 45678999999998 5787775 48999999999999 47753 5789999999999994 6653 468999999
Q ss_pred cCCcCCCCCCCCCCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccCCCCCCCEEEccCccCccc
Q 004248 222 SSNYLTGSIPPGLGTLSKLQYLNVSNNSLASSIPAQLGDLDSLVDLDLSMNSLSGSVPSELRGLRSLQKFVIGNNFLSGN 301 (766)
Q Consensus 222 s~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~ 301 (766)
++|.++ .+|.. .++|+.|++++|+++. +|.. +++|+.|+|++|++++ +|... .+|+.|++++|++++
T Consensus 270 s~N~L~-~Lp~l---p~~L~~L~Ls~N~Lt~-LP~~---p~~L~~LdLS~N~L~~-Lp~lp---~~L~~L~Ls~N~L~~- 336 (788)
T PRK15387 270 FSNPLT-HLPAL---PSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLAS-LPALP---SELCKLWAYNNQLTS- 336 (788)
T ss_pred cCCchh-hhhhc---hhhcCEEECcCCcccc-cccc---ccccceeECCCCcccc-CCCCc---ccccccccccCcccc-
Confidence 999998 46653 3678899999999984 5653 4789999999999986 45432 457889999999974
Q ss_pred cCCCccCCCCcccEEEccCCCCCCCCCcccCCCCCCCEEEccCCCCCCCCCcccccCCCCCcEEEccCCcCccCCCcCCC
Q 004248 302 LSVNLFPTVSQLQIIVLRQNGFTGPPPDVLWSMPQLRLLDISRNNFTGPLPNSRSNVNTSTVELNISQNMFYGGLTPVLG 381 (766)
Q Consensus 302 ~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~L~ls~N~l~g~~~~~l~ 381 (766)
+|. ...+|+.|+|++|+|++.++ . .++|+.|++++|+|++ +|.. ..+|..|++++|.+.+ +|...+
T Consensus 337 LP~----lp~~Lq~LdLS~N~Ls~LP~-l---p~~L~~L~Ls~N~L~~-LP~l----~~~L~~LdLs~N~Lt~-LP~l~s 402 (788)
T PRK15387 337 LPT----LPSGLQELSVSDNQLASLPT-L---PSELYKLWAYNNRLTS-LPAL----PSGLKELIVSGNRLTS-LPVLPS 402 (788)
T ss_pred ccc----cccccceEecCCCccCCCCC-C---Ccccceehhhcccccc-Cccc----ccccceEEecCCcccC-CCCccc
Confidence 553 12589999999999997543 2 3678999999999994 7743 3578999999999985 777778
Q ss_pred CCCEEeccCCcCccccChhhhh-cccCCCcccCCCCC
Q 004248 382 RFRLVDLSGNYFEGRVPEYVHS-NASSLDSNCLQNVP 417 (766)
Q Consensus 382 ~l~~ldLs~N~l~g~~p~~~~~-~~~~l~~n~l~~~~ 417 (766)
+|+.|++++|+|++ +|..... ....+++|.+...|
T Consensus 403 ~L~~LdLS~N~Lss-IP~l~~~L~~L~Ls~NqLt~LP 438 (788)
T PRK15387 403 ELKELMVSGNRLTS-LPMLPSGLLSLSVYRNQLTRLP 438 (788)
T ss_pred CCCEEEccCCcCCC-CCcchhhhhhhhhccCcccccC
Confidence 99999999999985 6754211 11256677777554
No 423
>PRK10345 hypothetical protein; Provisional
Probab=99.80 E-value=2.1e-19 Score=179.60 Aligned_cols=138 Identities=12% Similarity=0.151 Sum_probs=106.5
Q ss_pred CCccceeecCCcceEEEEEEcCCcEEEEEEeecccc-CHHHHHHHHHHHhhc-----CCCCcccceeEEEecC--CcEE-
Q 004248 536 FSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSV-KTEAYLLELDFFSKV-----SHARLVPLLGHCMERE--NEKF- 606 (766)
Q Consensus 536 ~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~-~~~~~~~E~~~l~~l-----~H~niv~l~~~~~~~~--~~~~- 606 (766)
+...+.||+|+||.||+ ...++.. +||++..... ..+++.+|+++++++ .||||++++|++.++. +.++
T Consensus 4 L~~~~~LG~G~~~~Vy~-hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~ 81 (210)
T PRK10345 4 LSEQSPLGTGRHRKCYA-HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYD 81 (210)
T ss_pred cCCcceecCCCceEEEE-CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEE
Confidence 45578999999999996 3334444 7998876433 356799999999999 5799999999876643 2333
Q ss_pred EEEee--CCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHh-hhhccCCCCCeEecCCCCCCeeeCC----CCcE
Q 004248 607 LVYKY--MPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGL-SYLHHECTLPFVHRDVQASSILLDD----KFEV 679 (766)
Q Consensus 607 lV~Ey--~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL-~yLH~~~~~~iiHrDlKp~NILl~~----~~~~ 679 (766)
+|+|| +++|+|.+++.+. .+++. ..++.+++.++ +|||++ +||||||||+|||++. +.++
T Consensus 82 ~I~e~~G~~~~tL~~~l~~~--------~~~e~--~~~~~~~L~~l~~yLh~~---~IvhrDlKp~NILl~~~~~~~~~~ 148 (210)
T PRK10345 82 VIADFDGKPSITLTEFAEQC--------RYEED--VAQLRQLLKKLKRYLLDN---RIVTMELKPQNILCQRISESEVIP 148 (210)
T ss_pred EEecCCCCcchhHHHHHHcc--------cccHh--HHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEeccCCCCCcE
Confidence 78999 6689999999642 14554 35678888888 999998 9999999999999974 3479
Q ss_pred Eecc-chhhh
Q 004248 680 RLGS-LSEVC 688 (766)
Q Consensus 680 kl~D-FG~a~ 688 (766)
+|+| ||...
T Consensus 149 ~LiDg~G~~~ 158 (210)
T PRK10345 149 VVCDNIGEST 158 (210)
T ss_pred EEEECCCCcc
Confidence 9999 55443
No 424
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.80 E-value=2.5e-18 Score=213.87 Aligned_cols=269 Identities=23% Similarity=0.268 Sum_probs=197.4
Q ss_pred cCCCCCEEecCCCCCCCCCchhhhhCCCCCCEEEccCCCCCccCCcccCCCCCCcEEEeecCcCCCCCCccccCCCCCCE
Q 004248 115 NLTHLASFNASRFLLPGSIPDWLGQQLPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPSSLGQLSVLSV 194 (766)
Q Consensus 115 ~l~~L~~L~ls~n~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~ 194 (766)
...+|+.|++++|.+. .+|..+. .+++|+.|+|++|...+.+| .++.+++|+.|+|++|.....+|..+.++++|+.
T Consensus 609 ~~~~L~~L~L~~s~l~-~L~~~~~-~l~~Lk~L~Ls~~~~l~~ip-~ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~ 685 (1153)
T PLN03210 609 RPENLVKLQMQGSKLE-KLWDGVH-SLTGLRNIDLRGSKNLKEIP-DLSMATNLETLKLSDCSSLVELPSSIQYLNKLED 685 (1153)
T ss_pred CccCCcEEECcCcccc-ccccccc-cCCCCCEEECCCCCCcCcCC-ccccCCcccEEEecCCCCccccchhhhccCCCCE
Confidence 4578899999998774 5676664 48999999999887666777 4888999999999998877789999999999999
Q ss_pred EEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCCCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCcC
Q 004248 195 LDLSRNSLTGNIPTSFGLLKNLSSLDISSNYLTGSIPPGLGTLSKLQYLNVSNNSLASSIPAQLGDLDSLVDLDLSMNSL 274 (766)
Q Consensus 195 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l 274 (766)
|++++|...+.+|..+ ++++|+.|+|++|...+.+|.. .++|++|++++|.+. .+|..+ .+++|++|++.++..
T Consensus 686 L~L~~c~~L~~Lp~~i-~l~sL~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~-~lP~~~-~l~~L~~L~l~~~~~ 759 (1153)
T PLN03210 686 LDMSRCENLEILPTGI-NLKSLYRLNLSGCSRLKSFPDI---STNISWLDLDETAIE-EFPSNL-RLENLDELILCEMKS 759 (1153)
T ss_pred EeCCCCCCcCccCCcC-CCCCCCEEeCCCCCCccccccc---cCCcCeeecCCCccc-cccccc-cccccccccccccch
Confidence 9999876656788766 7899999999998766667653 467889999999885 566655 577788887776432
Q ss_pred -------CccCCcccCCCCCCCEEEccCccCccccCCCccCCCCcccEEEccCCCCCCCCCcccCCCCCCCEEEccCCCC
Q 004248 275 -------SGSVPSELRGLRSLQKFVIGNNFLSGNLSVNLFPTVSQLQIIVLRQNGFTGPPPDVLWSMPQLRLLDISRNNF 347 (766)
Q Consensus 275 -------~g~~p~~l~~l~~L~~L~ls~N~l~g~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l 347 (766)
....|......++|+.|++++|...+.+|.. +.++++|+.|++++|...+.+|..+ ++++|+.|++++|..
T Consensus 760 ~~l~~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~s-i~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~ 837 (1153)
T PLN03210 760 EKLWERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSS-IQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSR 837 (1153)
T ss_pred hhccccccccchhhhhccccchheeCCCCCCccccChh-hhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCc
Confidence 1112222334467888888888777777765 4778888888888876555566655 678888888888766
Q ss_pred CCCCCcccccCCCCCcEEEccCCcCccCCCc---CCCCCCEEeccC-CcCccccChh
Q 004248 348 TGPLPNSRSNVNTSTVELNISQNMFYGGLTP---VLGRFRLVDLSG-NYFEGRVPEY 400 (766)
Q Consensus 348 ~g~~p~~~~~~~~~l~~L~ls~N~l~g~~~~---~l~~l~~ldLs~-N~l~g~~p~~ 400 (766)
...+|.. ..+++.|+|++|.+. .+|. .+++|+.|+|++ |++.+ +|..
T Consensus 838 L~~~p~~----~~nL~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~~-l~~~ 888 (1153)
T PLN03210 838 LRTFPDI----STNISDLNLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQR-VSLN 888 (1153)
T ss_pred ccccccc----ccccCEeECCCCCCc-cChHHHhcCCCCCEEECCCCCCcCc-cCcc
Confidence 6566642 356778888888776 3453 467788888887 45543 5443
No 425
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.78 E-value=7.7e-19 Score=189.31 Aligned_cols=198 Identities=16% Similarity=0.092 Sum_probs=152.4
Q ss_pred CCCccceeecCCcceEEEEEEcC--CcEEEEEEeeccccC-HHHHHHHHHHHhhcCC----CCcccceeEEEecCCcEEE
Q 004248 535 DFSDANLIKNGHSGDLFRGILEG--GIPVVIKRIDLQSVK-TEAYLLELDFFSKVSH----ARLVPLLGHCMERENEKFL 607 (766)
Q Consensus 535 ~~~~~~~ig~G~~g~Vy~~~~~~--g~~vavK~l~~~~~~-~~~~~~E~~~l~~l~H----~niv~l~~~~~~~~~~~~l 607 (766)
.|...+.||+|+||.||++.... ...+|+|........ ...+..|+.++..+.+ +++.++++.....+...|+
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i 98 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI 98 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence 78899999999999999999544 357888877654322 2368889999999873 5778888755323457899
Q ss_pred EEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCC-----CcEEec
Q 004248 608 VYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDK-----FEVRLG 682 (766)
Q Consensus 608 V~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~-----~~~kl~ 682 (766)
||+.+ |.+|.++...... ..++-.+...|+.|++.+|+++|+. ++|||||||+|+.+... ..+.+.
T Consensus 99 VM~l~-G~sL~dl~~~~~~-----~~fs~~T~l~ia~q~l~~l~~lH~~---G~iHRDiKp~N~~~g~~~~~~~~~~~ll 169 (322)
T KOG1164|consen 99 VMSLL-GPSLEDLRKRNPP-----GRFSRKTVLRIAIQNLNALEDLHSK---GFIHRDIKPENFVVGQSSRSEVRTLYLL 169 (322)
T ss_pred EEecc-CccHHHHHHhCCC-----CCcCHhHHHHHHHHHHHHHHHHHhc---CcccCCcCHHHeeecCCCCcccceEEEE
Confidence 99988 5699997754431 3589999999999999999999998 99999999999999865 469999
Q ss_pred cchhhh--hc-CCC----------CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 683 SLSEVC--AQ-GGD----------AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 683 DFG~a~--~~-~~~----------~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
|||+|+ .. ... .....||..|.++....+.. .+.+-|+||++-++.|+..|..|+...
T Consensus 170 DfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e---------~~r~DDles~~Y~l~el~~g~LPW~~~ 240 (322)
T KOG1164|consen 170 DFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIE---------QGRRDDLESLFYMLLELLKGSLPWEAL 240 (322)
T ss_pred ecCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCc---------cCCchhhhhHHHHHHHHhcCCCCCccc
Confidence 999998 32 111 11234666776666544443 467889999999999999999998443
Q ss_pred c
Q 004248 750 R 750 (766)
Q Consensus 750 ~ 750 (766)
+
T Consensus 241 ~ 241 (322)
T KOG1164|consen 241 E 241 (322)
T ss_pred c
Confidence 3
No 426
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.78 E-value=1.3e-19 Score=177.46 Aligned_cols=107 Identities=19% Similarity=0.163 Sum_probs=91.3
Q ss_pred CChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcCCCC
Q 004248 615 GDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDA 694 (766)
Q Consensus 615 GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~~~~ 694 (766)
|+|.++++.++ ..++|.++..|+.||++||+|||++ + ||+|||++.++.+|+ ||.++......
T Consensus 1 GsL~~~l~~~~------~~l~~~~~~~i~~qi~~~L~~lH~~---~------kp~Nil~~~~~~~~~--fG~~~~~~~~~ 63 (176)
T smart00750 1 VSLADILEVRG------RPLNEEEIWAVCLQCLRALRELHRQ---A------KSGNILLTWDGLLKL--DGSVAFKTPEQ 63 (176)
T ss_pred CcHHHHHHHhC------CCCCHHHHHHHHHHHHHHHHHHHhc---C------CcccEeEcCccceee--ccceEeecccc
Confidence 78999997543 2499999999999999999999987 3 999999999999999 99988764332
Q ss_pred ccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 695 HQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 695 ~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
..+|+.|+|||.+.... ++.|+|||||||++|||+||+.||...
T Consensus 64 --~~g~~~y~aPE~~~~~~---------~~~~~DiwSlG~il~elltg~~p~~~~ 107 (176)
T smart00750 64 --SRVDPYFMAPEVIQGQS---------YTEKADIYSLGITLYEALDYELPYNEE 107 (176)
T ss_pred --CCCcccccChHHhcCCC---------CcchhhHHHHHHHHHHHHhCCCCcccc
Confidence 25789999999986554 468999999999999999999999543
No 427
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.78 E-value=2.6e-20 Score=203.16 Aligned_cols=185 Identities=17% Similarity=0.142 Sum_probs=152.9
Q ss_pred eeecCCcceEEEEE----EcCCcEEEEEEeeccccC---HHHHHHHHHHHhhcC-CCCcccceeEEEecCCcEEEEEeeC
Q 004248 541 LIKNGHSGDLFRGI----LEGGIPVVIKRIDLQSVK---TEAYLLELDFFSKVS-HARLVPLLGHCMERENEKFLVYKYM 612 (766)
Q Consensus 541 ~ig~G~~g~Vy~~~----~~~g~~vavK~l~~~~~~---~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~~lV~Ey~ 612 (766)
++|+|+||.|+.+. .+.|.-+|+|.+.+.... ......|..++..++ ||.+|+++. +++.+...+++++|.
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhy-afqt~~kl~l~ld~~ 79 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHY-AFQTDGKLYLILDFL 79 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeee-eeccccchhHhhhhc
Confidence 36899999999765 344778899988654322 225566888899997 999999985 556678899999999
Q ss_pred CCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcCC
Q 004248 613 PNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGG 692 (766)
Q Consensus 613 ~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~~ 692 (766)
.+|+|...+..... +++.....+...+|.|++++|.. +|+|||+|++||+++.+|++|+.|||+.+..-+
T Consensus 80 rgg~lft~l~~~~~-------f~~~~~~~~~aelaLald~lh~l---~iiyrd~k~enilld~~Ghi~~tdfglske~v~ 149 (612)
T KOG0603|consen 80 RGGDLFTRLSKEVM-------FDELDVAFYLAELALALDHLHKL---GIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVK 149 (612)
T ss_pred ccchhhhccccCCc-------hHHHHHHHHHHHHHHHHhhcchh---HHHHhcccccceeecccCccccCCchhhhHhHh
Confidence 99999988865443 77777788888999999999997 999999999999999999999999999987632
Q ss_pred CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 693 DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 693 ~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
.... +||..|||||+..+ ....+|+|||||+++||+||-.||..
T Consensus 150 ~~~~-cgt~eymApEI~~g-----------h~~a~D~ws~gvl~felltg~~pf~~ 193 (612)
T KOG0603|consen 150 EKIA-CGTYEYRAPEIING-----------HLSAADWWSFGVLAFELLTGTLPFGG 193 (612)
T ss_pred hhhc-ccchhhhhhHhhhc-----------cCCcccchhhhhhHHHHhhCCCCCch
Confidence 2222 88999999999862 35788999999999999999999964
No 428
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.77 E-value=7.9e-21 Score=213.25 Aligned_cols=264 Identities=27% Similarity=0.339 Sum_probs=174.0
Q ss_pred CCCCEEecCCCCCCCCCchhhhhCCCCCCEEEccCCCCCccCCcccCCCCCCcEEEeecCcCCCCCCccccCCCCCCEEE
Q 004248 117 THLASFNASRFLLPGSIPDWLGQQLPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPSSLGQLSVLSVLD 196 (766)
Q Consensus 117 ~~L~~L~ls~n~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~ 196 (766)
++|+.|+.++|.+....+... -.+|+++|+++|++++ +|+.++.+.+|+.|+..+|+|+ .+|..+...++|+.|+
T Consensus 219 ~~l~~L~a~~n~l~~~~~~p~---p~nl~~~dis~n~l~~-lp~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~ 293 (1081)
T KOG0618|consen 219 PSLTALYADHNPLTTLDVHPV---PLNLQYLDISHNNLSN-LPEWIGACANLEALNANHNRLV-ALPLRISRITSLVSLS 293 (1081)
T ss_pred cchheeeeccCcceeeccccc---cccceeeecchhhhhc-chHHHHhcccceEecccchhHH-hhHHHHhhhhhHHHHH
Confidence 344555555555542222211 2355666666666654 3456666666666666666664 4566666666666666
Q ss_pred ccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCC-CCCC-CccEEEccCCCCCCCCccccCCCCCCCEEEccCCcC
Q 004248 197 LSRNSLTGNIPTSFGLLKNLSSLDISSNYLTGSIPPGL-GTLS-KLQYLNVSNNSLASSIPAQLGDLDSLVDLDLSMNSL 274 (766)
Q Consensus 197 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l-~~l~-~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l 274 (766)
+.+|.+. .+|.....+++|++|||..|++. .+|+.+ ..+. +|+.|+.+.|.+....-..=..++.|+.|++.+|.|
T Consensus 294 ~~~nel~-yip~~le~~~sL~tLdL~~N~L~-~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~L 371 (1081)
T KOG0618|consen 294 AAYNELE-YIPPFLEGLKSLRTLDLQSNNLP-SLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHL 371 (1081)
T ss_pred hhhhhhh-hCCCcccccceeeeeeehhcccc-ccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcc
Confidence 6666665 45555566666666666666665 344322 1122 245555555555422211112345688888889998
Q ss_pred CccCCcccCCCCCCCEEEccCccCccccCCCccCCCCcccEEEccCCCCCCCCCcccCCCCCCCEEEccCCCCCCCCCcc
Q 004248 275 SGSVPSELRGLRSLQKFVIGNNFLSGNLSVNLFPTVSQLQIIVLRQNGFTGPPPDVLWSMPQLRLLDISRNNFTGPLPNS 354 (766)
Q Consensus 275 ~g~~p~~l~~l~~L~~L~ls~N~l~g~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~ 354 (766)
+...-+.+.+.++|+.|+|++|.+. .+|...+.++..|+.|+||+|+++. +|+.+.+++.|++|...+|++. .+|+
T Consensus 372 td~c~p~l~~~~hLKVLhLsyNrL~-~fpas~~~kle~LeeL~LSGNkL~~-Lp~tva~~~~L~tL~ahsN~l~-~fPe- 447 (1081)
T KOG0618|consen 372 TDSCFPVLVNFKHLKVLHLSYNRLN-SFPASKLRKLEELEELNLSGNKLTT-LPDTVANLGRLHTLRAHSNQLL-SFPE- 447 (1081)
T ss_pred cccchhhhccccceeeeeecccccc-cCCHHHHhchHHhHHHhcccchhhh-hhHHHHhhhhhHHHhhcCCcee-echh-
Confidence 8877777888889999999999885 6787778888899999999999975 4588888899999999999888 6663
Q ss_pred cccCCCCCcEEEccCCcCcc-CCCcCC--CCCCEEeccCCc
Q 004248 355 RSNVNTSTVELNISQNMFYG-GLTPVL--GRFRLVDLSGNY 392 (766)
Q Consensus 355 ~~~~~~~l~~L~ls~N~l~g-~~~~~l--~~l~~ldLs~N~ 392 (766)
......++.+|+|.|+++- .+|..+ ++|++|||++|.
T Consensus 448 -~~~l~qL~~lDlS~N~L~~~~l~~~~p~p~LkyLdlSGN~ 487 (1081)
T KOG0618|consen 448 -LAQLPQLKVLDLSCNNLSEVTLPEALPSPNLKYLDLSGNT 487 (1081)
T ss_pred -hhhcCcceEEecccchhhhhhhhhhCCCcccceeeccCCc
Confidence 3566788899999998864 344322 689999999997
No 429
>smart00090 RIO RIO-like kinase.
Probab=99.77 E-value=2.1e-18 Score=176.57 Aligned_cols=144 Identities=15% Similarity=0.149 Sum_probs=111.2
Q ss_pred CCCccceeecCCcceEEEEE--EcCCcEEEEEEeeccccC-------------------------HHHHHHHHHHHhhcC
Q 004248 535 DFSDANLIKNGHSGDLFRGI--LEGGIPVVIKRIDLQSVK-------------------------TEAYLLELDFFSKVS 587 (766)
Q Consensus 535 ~~~~~~~ig~G~~g~Vy~~~--~~~g~~vavK~l~~~~~~-------------------------~~~~~~E~~~l~~l~ 587 (766)
.|+..+.||+|+||.||+|. ..+|+.||||.++..... ...+.+|++++.++.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 47788999999999999998 578999999998753210 123578999999997
Q ss_pred CCCcccceeEEEecCCcEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCC-eEecCC
Q 004248 588 HARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLP-FVHRDV 666 (766)
Q Consensus 588 H~niv~l~~~~~~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~-iiHrDl 666 (766)
|.. +.....+.. ...++||||+++++|........ .+...+...++.|++.+++|||+. + |+||||
T Consensus 109 ~~~-i~~p~~~~~--~~~~lV~E~~~g~~L~~~~~~~~-------~~~~~~~~~i~~qi~~~l~~LH~~---g~iiH~Di 175 (237)
T smart00090 109 EAG-VPVPKPIAW--RRNVLVMEFIGGDGLPAPRLKDV-------EPEEEEEFELYDDILEEMRKLYKE---GELVHGDL 175 (237)
T ss_pred hcC-CCCCeeeEe--cCceEEEEEecCCcccccccccC-------CcchHHHHHHHHHHHHHHHHHHhc---CCEEeCCC
Confidence 643 222222222 23589999999988876543221 245556778999999999999998 8 999999
Q ss_pred CCCCeeeCCCCcEEeccchhhhhcCC
Q 004248 667 QASSILLDDKFEVRLGSLSEVCAQGG 692 (766)
Q Consensus 667 Kp~NILl~~~~~~kl~DFG~a~~~~~ 692 (766)
||+||+++ ++++||+|||.+...+.
T Consensus 176 kp~NIli~-~~~i~LiDFg~a~~~~~ 200 (237)
T smart00090 176 SEYNILVH-DGKVVIIDVSQSVELDH 200 (237)
T ss_pred ChhhEEEE-CCCEEEEEChhhhccCC
Confidence 99999999 88999999999876543
No 430
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.75 E-value=1.7e-18 Score=167.10 Aligned_cols=206 Identities=16% Similarity=0.127 Sum_probs=150.5
Q ss_pred HHHHHHHhCCCCccceeecCCcceEEEEE-EcCCcEEEEEEeeccccCHHHHHHHHHHHhhcCCC-CcccceeEEEecCC
Q 004248 526 YQQLLAATGDFSDANLIKNGHSGDLFRGI-LEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHA-RLVPLLGHCMEREN 603 (766)
Q Consensus 526 ~~~l~~~~~~~~~~~~ig~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~H~-niv~l~~~~~~~~~ 603 (766)
.+++..+ +.|..+++||.|+||.+|.|. ..+|..||||.=+.. ....+...|.++.+.++|- -|-.+..|..+ +.
T Consensus 8 ~~~~iv~-gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~-a~hpqL~yEskvY~iL~~g~GiP~i~~y~~e-~~ 84 (341)
T KOG1163|consen 8 LEELIVG-GKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSK-AKHPQLLYESKVYRILQGGVGIPHIRHYGTE-KD 84 (341)
T ss_pred hhhheec-cceEEEEeecCCchhheeeeeeccCCceEEEEeeccc-CCCcchhHHHHHHHHhccCCCCchhhhhccc-cc
Confidence 3444433 579999999999999999998 788999999975433 2344677899999998763 34444443333 45
Q ss_pred cEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCC---CcEE
Q 004248 604 EKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDK---FEVR 680 (766)
Q Consensus 604 ~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~---~~~k 680 (766)
.-.+|||.. |.+|+++..--. ..++..+.+-+|-|++.-++|+|.+ ++|||||||+|.|..-+ ..+.
T Consensus 85 ynvlVMdLL-GPsLEdLfnfC~------R~ftmkTvLMLaDQml~RiEyvH~r---~fiHRDIKPdNFLMGlgrh~~kl~ 154 (341)
T KOG1163|consen 85 YNVLVMDLL-GPSLEDLFNFCS------RRFTMKTVLMLADQMLSRIEYVHLR---NFIHRDIKPDNFLMGLGRHCNKLY 154 (341)
T ss_pred cceeeeecc-CccHHHHHHHHh------hhhhHHhHHHHHHHHHHHHHHHHhh---ccccccCCccceeeccccccceEE
Confidence 678999998 569999875321 2488889999999999999999998 89999999999998743 4588
Q ss_pred eccchhhhhcCCCCc----------cceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCCc
Q 004248 681 LGSLSEVCAQGGDAH----------QSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSSR 750 (766)
Q Consensus 681 l~DFG~a~~~~~~~~----------~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~~ 750 (766)
++|||+|+...+..+ .-.||..|.+-.... ..+-+.+-|+=|+|-||...--|..||..-.
T Consensus 155 LIDFGLaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~---------g~eqSRRDDmeSvgYvLmYfnrG~LPWQglk 225 (341)
T KOG1163|consen 155 LIDFGLAKKYRDIRTRQHIPYREDRNLTGTARYASINAHL---------GIEQSRRDDMESVGYVLMYFNRGSLPWQGLK 225 (341)
T ss_pred EEeccchhhhccccccccCccccCCccceeeeehhhhhhh---------hhhhhhhhhhhhhcceeeeeecCCCcccccc
Confidence 999999987633221 123444443322111 1234667899999999999999999996544
Q ss_pred ccc
Q 004248 751 FGV 753 (766)
Q Consensus 751 ~~~ 753 (766)
...
T Consensus 226 a~t 228 (341)
T KOG1163|consen 226 AAT 228 (341)
T ss_pred hhh
Confidence 443
No 431
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.74 E-value=8.6e-18 Score=168.14 Aligned_cols=143 Identities=17% Similarity=0.142 Sum_probs=111.8
Q ss_pred HHHHHhCCCCccceeecCCcceEEEEEEcCCcEEEEEEeeccccC-----------------------HHHHHHHHHHHh
Q 004248 528 QLLAATGDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVK-----------------------TEAYLLELDFFS 584 (766)
Q Consensus 528 ~l~~~~~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~-----------------------~~~~~~E~~~l~ 584 (766)
++.+...-|...+.||+|+||.||+|..++|+.||||+++..... ...+.+|..++.
T Consensus 9 ~~~~~~~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 88 (198)
T cd05144 9 TLVKRGVVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALK 88 (198)
T ss_pred HHHHcCchhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHH
Confidence 444444347778999999999999999888999999987643210 123678999999
Q ss_pred hcCCCC--cccceeEEEecCCcEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeE
Q 004248 585 KVSHAR--LVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFV 662 (766)
Q Consensus 585 ~l~H~n--iv~l~~~~~~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ii 662 (766)
++.|++ +.+.++ ....++||||+++++|.+.... .....++.+++.++.++|+. +|+
T Consensus 89 ~l~~~~i~v~~~~~-----~~~~~lv~e~~~g~~L~~~~~~-------------~~~~~~~~~i~~~l~~lh~~---gi~ 147 (198)
T cd05144 89 ALYEEGFPVPKPID-----WNRHAVVMEYIDGVELYRVRVL-------------EDPEEVLDEILEEIVKAYKH---GII 147 (198)
T ss_pred HHHHcCCCCCceee-----cCCceEEEEEeCCcchhhcccc-------------ccHHHHHHHHHHHHHHHHHC---CCC
Confidence 998884 334333 2346999999999998765421 23456888999999999997 999
Q ss_pred ecCCCCCCeeeCCCCcEEeccchhhhhcC
Q 004248 663 HRDVQASSILLDDKFEVRLGSLSEVCAQG 691 (766)
Q Consensus 663 HrDlKp~NILl~~~~~~kl~DFG~a~~~~ 691 (766)
||||||+||++++++++||+|||.+...+
T Consensus 148 H~Dl~p~Nill~~~~~~~liDfg~~~~~~ 176 (198)
T cd05144 148 HGDLSEFNILVDDDEKIYIIDWPQMVSTD 176 (198)
T ss_pred cCCCCcccEEEcCCCcEEEEECCccccCC
Confidence 99999999999999999999999986553
No 432
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.74 E-value=4.4e-19 Score=203.30 Aligned_cols=196 Identities=13% Similarity=0.099 Sum_probs=153.0
Q ss_pred CccceeecCCcceEEEEEE-cCCcEEEEEEee----ccccC---HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEE
Q 004248 537 SDANLIKNGHSGDLFRGIL-EGGIPVVIKRID----LQSVK---TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLV 608 (766)
Q Consensus 537 ~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~----~~~~~---~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV 608 (766)
...+++|.|++|.|+.+.. ...+..+.|... ..... ...+..|..+-..++|||++..+..+.+. ...+-+
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~-~~~~~~ 399 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEI-DGILQS 399 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhc-ccchhh
Confidence 3468899999998888873 334445555332 11111 12366788888899999999888766653 344555
Q ss_pred EeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhh
Q 004248 609 YKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVC 688 (766)
Q Consensus 609 ~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~ 688 (766)
||||++ ||..++.... .+.-.++..++.|+..|+.|+|+. +|.|||+|++|++++.+|.+||+|||.+.
T Consensus 400 mE~~~~-Dlf~~~~~~~-------~~~~~e~~c~fKqL~~Gv~y~h~~---GiahrdlK~enll~~~~g~lki~Dfg~~~ 468 (601)
T KOG0590|consen 400 MEYCPY-DLFSLVMSNG-------KLTPLEADCFFKQLLRGVKYLHSM---GLAHRDLKLENLLVTENGILKIIDFGAAS 468 (601)
T ss_pred hhcccH-HHHHHHhccc-------ccchhhhhHHHHHHHHHHHHHHhc---CceeccCccccEEEecCCceEEeecCcce
Confidence 999999 9999997642 377888899999999999999998 99999999999999999999999999886
Q ss_pred hcC--C-----CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCCccc
Q 004248 689 AQG--G-----DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSSRFG 752 (766)
Q Consensus 689 ~~~--~-----~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~~~~ 752 (766)
... . .....+|+..|.|||++.+..|.. ...||||.|||+..|++|+.||......
T Consensus 469 vf~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydp--------r~vDiwS~~ii~~~m~~~~~~Wk~a~~~ 531 (601)
T KOG0590|consen 469 VFRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDP--------RAVDVWSCGIIYICMILGRFPWKVAKKS 531 (601)
T ss_pred eeccCcchhhhhhcCcccCCcCcCcccccccccCc--------chhhhhhccceEEEEecCCCcccccccc
Confidence 542 1 134567899999999998887753 5789999999999999999999544444
No 433
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.73 E-value=1.4e-17 Score=168.26 Aligned_cols=133 Identities=19% Similarity=0.227 Sum_probs=111.8
Q ss_pred ceeecCCcceEEEEEEcCCcEEEEEEeeccccC---------HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEe
Q 004248 540 NLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVK---------TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYK 610 (766)
Q Consensus 540 ~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~---------~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~E 610 (766)
+.||+|++|.||+|.. +|..|+||+....... ..++.+|++++..++|++|.....++.. .+..++|||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~-~~~~~lv~e 79 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVD-PENFIIVME 79 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEe-CCCCEEEEE
Confidence 5799999999999987 6678999986532211 2468899999999999998877776655 456899999
Q ss_pred eCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhh
Q 004248 611 YMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCA 689 (766)
Q Consensus 611 y~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~ 689 (766)
|++|++|.+++... .+ ++..++.+++.+|+++|+. +++|||+||+||+++ ++.++|+|||.++.
T Consensus 80 ~~~G~~L~~~~~~~----------~~-~~~~i~~~i~~~l~~lH~~---~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 80 YIEGEPLKDLINSN----------GM-EELELSREIGRLVGKLHSA---GIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred EeCCcCHHHHHHhc----------cH-HHHHHHHHHHHHHHHHHhC---CcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 99999999988532 22 7889999999999999997 999999999999999 78999999999875
No 434
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.73 E-value=6.9e-20 Score=205.77 Aligned_cols=265 Identities=29% Similarity=0.398 Sum_probs=211.9
Q ss_pred CCCCCEEecCCCCCCCCCchhhhhCCCCCCEEEccCCCCCccCCcccCCCCCCcEEEeecCcCCCCCCccccCCCCCCEE
Q 004248 116 LTHLASFNASRFLLPGSIPDWLGQQLPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPSSLGQLSVLSVL 195 (766)
Q Consensus 116 l~~L~~L~ls~n~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L 195 (766)
-.+|++++++.|.+. .+|+|++. +.+|+.|+..+|+++ .+|..+...++|++|....|.+. -+|+....+++|++|
T Consensus 240 p~nl~~~dis~n~l~-~lp~wi~~-~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel~-yip~~le~~~sL~tL 315 (1081)
T KOG0618|consen 240 PLNLQYLDISHNNLS-NLPEWIGA-CANLEALNANHNRLV-ALPLRISRITSLVSLSAAYNELE-YIPPFLEGLKSLRTL 315 (1081)
T ss_pred cccceeeecchhhhh-cchHHHHh-cccceEecccchhHH-hhHHHHhhhhhHHHHHhhhhhhh-hCCCcccccceeeee
Confidence 357899999999986 58899886 999999999999995 78888999999999999999998 688888899999999
Q ss_pred EccCCCCCCCCCc-ccCCCCC-CCEEeccCCcCCCCCCCCCCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCc
Q 004248 196 DLSRNSLTGNIPT-SFGLLKN-LSSLDISSNYLTGSIPPGLGTLSKLQYLNVSNNSLASSIPAQLGDLDSLVDLDLSMNS 273 (766)
Q Consensus 196 ~Ls~N~l~~~~p~-~~~~l~~-L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~ 273 (766)
||..|++. .+|+ .|..+.. |+.|+.+.|.+....-.+=..++.|+.|++.+|.++...-..+.+.+.|+.|+|++|+
T Consensus 316 dL~~N~L~-~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNr 394 (1081)
T KOG0618|consen 316 DLQSNNLP-SLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNR 394 (1081)
T ss_pred eehhcccc-ccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeecccc
Confidence 99999997 4555 3444443 7888888888874322222356789999999999998777778899999999999999
Q ss_pred CCccCCcccCCCCCCCEEEccCccCccccCCCccCCCCcccEEEccCCCCCCCCCcccCCCCCCCEEEccCCCCCC-CCC
Q 004248 274 LSGSVPSELRGLRSLQKFVIGNNFLSGNLSVNLFPTVSQLQIIVLRQNGFTGPPPDVLWSMPQLRLLDISRNNFTG-PLP 352 (766)
Q Consensus 274 l~g~~p~~l~~l~~L~~L~ls~N~l~g~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g-~~p 352 (766)
+.......+.++..|++|+||+|.++ .+|..+ .++..|++|...+|++...| .+..+++|+.+|+|.|+|+- .+|
T Consensus 395 L~~fpas~~~kle~LeeL~LSGNkL~-~Lp~tv-a~~~~L~tL~ahsN~l~~fP--e~~~l~qL~~lDlS~N~L~~~~l~ 470 (1081)
T KOG0618|consen 395 LNSFPASKLRKLEELEELNLSGNKLT-TLPDTV-ANLGRLHTLRAHSNQLLSFP--ELAQLPQLKVLDLSCNNLSEVTLP 470 (1081)
T ss_pred cccCCHHHHhchHHhHHHhcccchhh-hhhHHH-HhhhhhHHHhhcCCceeech--hhhhcCcceEEecccchhhhhhhh
Confidence 97544456789999999999999997 677655 78899999999999997654 78899999999999999983 334
Q ss_pred cccccCCCCCcEEEccCCcC---ccCCCcCCCCCCEEeccCC
Q 004248 353 NSRSNVNTSTVELNISQNMF---YGGLTPVLGRFRLVDLSGN 391 (766)
Q Consensus 353 ~~~~~~~~~l~~L~ls~N~l---~g~~~~~l~~l~~ldLs~N 391 (766)
... ..++|++||+++|.- .-.-.+.+..+...++.-|
T Consensus 471 ~~~--p~p~LkyLdlSGN~~l~~d~~~l~~l~~l~~~~i~~~ 510 (1081)
T KOG0618|consen 471 EAL--PSPNLKYLDLSGNTRLVFDHKTLKVLKSLSQMDITLN 510 (1081)
T ss_pred hhC--CCcccceeeccCCcccccchhhhHHhhhhhheecccC
Confidence 321 227899999999963 2233344555666666655
No 435
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.73 E-value=1e-19 Score=196.12 Aligned_cols=234 Identities=26% Similarity=0.269 Sum_probs=116.7
Q ss_pred ccCCCCCEEecCCCCCCCC----CchhhhhCCCCCCEEEccCCCCCc------cCCcccCCCCCCcEEEeecCcCCCCCC
Q 004248 114 VNLTHLASFNASRFLLPGS----IPDWLGQQLPTLQALDLRSCSISG------VIPFSLGNLTNLTSLYLSDNGLTGTIP 183 (766)
Q Consensus 114 ~~l~~L~~L~ls~n~l~g~----ip~~~~~~l~~L~~L~Ls~N~l~g------~~p~~l~~l~~L~~L~Ls~N~l~~~~p 183 (766)
..+.+|+.++++++.+... ++..+. ..++|++|+++++.+.+ .++..+..+++|+.|+|++|.+.+..+
T Consensus 20 ~~l~~L~~l~l~~~~l~~~~~~~i~~~l~-~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~ 98 (319)
T cd00116 20 PKLLCLQVLRLEGNTLGEEAAKALASALR-PQPSLKELCLSLNETGRIPRGLQSLLQGLTKGCGLQELDLSDNALGPDGC 98 (319)
T ss_pred HHHhhccEEeecCCCCcHHHHHHHHHHHh-hCCCceEEeccccccCCcchHHHHHHHHHHhcCceeEEEccCCCCChhHH
Confidence 3444566666666655332 333332 25556666666665542 223345556666666666666654444
Q ss_pred ccccCCCC---CCEEEccCCCCCC----CCCcccCCC-CCCCEEeccCCcCCCC----CCCCCCCCCCccEEEccCCCCC
Q 004248 184 SSLGQLSV---LSVLDLSRNSLTG----NIPTSFGLL-KNLSSLDISSNYLTGS----IPPGLGTLSKLQYLNVSNNSLA 251 (766)
Q Consensus 184 ~~l~~L~~---L~~L~Ls~N~l~~----~~p~~~~~l-~~L~~L~Ls~N~l~~~----~p~~l~~l~~L~~L~Ls~N~l~ 251 (766)
..+..+.+ |++|++++|++++ .+...+..+ ++|+.|+|++|.+++. ++..+..+++|++|++++|.++
T Consensus 99 ~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~ 178 (319)
T cd00116 99 GVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKALRANRDLKELNLANNGIG 178 (319)
T ss_pred HHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCc
Confidence 44444443 6666666666552 122233444 5666666666666532 2223444555666666666665
Q ss_pred CC----CccccCCCCCCCEEEccCCcCCcc----CCcccCCCCCCCEEEccCccCccccCCCcc----CCCCcccEEEcc
Q 004248 252 SS----IPAQLGDLDSLVDLDLSMNSLSGS----VPSELRGLRSLQKFVIGNNFLSGNLSVNLF----PTVSQLQIIVLR 319 (766)
Q Consensus 252 ~~----~p~~l~~l~~L~~L~Ls~N~l~g~----~p~~l~~l~~L~~L~ls~N~l~g~~~~~~~----~~l~~L~~L~L~ 319 (766)
+. ++..+..+++|++|++++|.+++. ++..+..+++|++|++++|.+++.....+. .....|+.|+++
T Consensus 179 ~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~ 258 (319)
T cd00116 179 DAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAAALASALLSPNISLLTLSLS 258 (319)
T ss_pred hHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchHHHHHHHHHHhccCCCceEEEcc
Confidence 31 222334445666666666665432 223344555566666666655431111111 112455555555
Q ss_pred CCCCCC----CCCcccCCCCCCCEEEccCCCCC
Q 004248 320 QNGFTG----PPPDVLWSMPQLRLLDISRNNFT 348 (766)
Q Consensus 320 ~N~l~~----~~p~~l~~l~~L~~L~Ls~N~l~ 348 (766)
+|.++. .+...+..+++|+++|+++|.++
T Consensus 259 ~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~ 291 (319)
T cd00116 259 CNDITDDGAKDLAEVLAEKESLLELDLRGNKFG 291 (319)
T ss_pred CCCCCcHHHHHHHHHHhcCCCccEEECCCCCCc
Confidence 555541 12233344455555555555555
No 436
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.73 E-value=1.6e-17 Score=167.34 Aligned_cols=191 Identities=13% Similarity=0.066 Sum_probs=146.5
Q ss_pred CCCccceeecCCcceEEEEE-EcCCcEEEEEEeeccccCHHHHHHHHHHHhhcC-CCCcccceeEEEec-CCcEEEEEee
Q 004248 535 DFSDANLIKNGHSGDLFRGI-LEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVS-HARLVPLLGHCMER-ENEKFLVYKY 611 (766)
Q Consensus 535 ~~~~~~~ig~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~-~~~~~lV~Ey 611 (766)
+|...++||+|+||+.+.|+ +-+++.||||.=.. +....+...|.+..+.|. .+.|-..+. +.. +.+-.||+|.
T Consensus 29 hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPr-kS~APQLrdEYr~YKlL~g~~GIP~vYY--FGqeG~~NiLVidL 105 (449)
T KOG1165|consen 29 HYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPR-KSEAPQLRDEYRTYKLLGGTEGIPQVYY--FGQEGKYNILVIDL 105 (449)
T ss_pred cceeccccccCcceeeecccccccCceEEEEeccc-cCCcchHHHHHHHHHHHcCCCCCCceee--eccccchhhhhhhh
Confidence 58889999999999999999 77899999997533 233446777888777775 577776653 332 3456899999
Q ss_pred CCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCC-----cEEeccchh
Q 004248 612 MPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKF-----EVRLGSLSE 686 (766)
Q Consensus 612 ~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~-----~~kl~DFG~ 686 (766)
. |.+|+|+..--+ ..++..+...||.|++.-++|+|++ ..|.|||||+|.||..-+ .+.+.|||+
T Consensus 106 L-GPSLEDLFD~Cg------R~FSvKTV~miA~Qmi~rie~vH~k---~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGm 175 (449)
T KOG1165|consen 106 L-GPSLEDLFDLCG------RRFSVKTVAMIAKQMITRIEYVHEK---DLIYRDIKPDNFLIGRPGTKDANVIHIIDFGM 175 (449)
T ss_pred h-CcCHHHHHHHhc------CcccHHhHHHHHHHHHHHHHHHHhc---ceeecccCccceeecCCCCCCCceEEEEeccc
Confidence 8 569998875433 3489999999999999999999998 899999999999997543 488999999
Q ss_pred hhhcCCCCc----------cceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCC
Q 004248 687 VCAQGGDAH----------QSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNL 747 (766)
Q Consensus 687 a~~~~~~~~----------~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~ 747 (766)
|+.+.++.+ .-.||..||+--+-.+.. -+.+-|.=|+|-|.+..+-|..||.
T Consensus 176 AK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrE---------QSRRDDLEaLGHvFmYFLRGsLPWQ 237 (449)
T KOG1165|consen 176 AKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGRE---------QSRRDDLEALGHVFMYFLRGSLPWQ 237 (449)
T ss_pred hhhhcCccccccCccccccccccceeeeEeeccccch---------hhhhhhHHHhhhhhhhhccCCCccc
Confidence 997643322 224555555543332222 3567899999999999999999994
No 437
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.72 E-value=6.6e-20 Score=188.27 Aligned_cols=272 Identities=21% Similarity=0.211 Sum_probs=143.5
Q ss_pred CEEecCCCCCCCCCchhhhhCCCCCCEEEccCCCCCccCCcccCCCCCCcEEEeec-CcCCCCCCccccCCCCCCEEEcc
Q 004248 120 ASFNASRFLLPGSIPDWLGQQLPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSD-NGLTGTIPSSLGQLSVLSVLDLS 198 (766)
Q Consensus 120 ~~L~ls~n~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~-N~l~~~~p~~l~~L~~L~~L~Ls 198 (766)
..++|..|.++ .||+..++.+++|+.||||+|.|+.+-|.+|.++.+|..|-+.+ |+|+...-..|++|..|+.|.+.
T Consensus 70 veirLdqN~I~-~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLllN 148 (498)
T KOG4237|consen 70 VEIRLDQNQIS-SIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLLLN 148 (498)
T ss_pred eEEEeccCCcc-cCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHhcC
Confidence 45566666663 56666666677777777777777777777777777776665555 77775444567777777777777
Q ss_pred CCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCC-CCCCCCCccEEEccCCCCC------------CCCccccCCCCCCC
Q 004248 199 RNSLTGNIPTSFGLLKNLSSLDISSNYLTGSIPP-GLGTLSKLQYLNVSNNSLA------------SSIPAQLGDLDSLV 265 (766)
Q Consensus 199 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~l~~l~~L~~L~Ls~N~l~------------~~~p~~l~~l~~L~ 265 (766)
-|++.-...+.|..|++|..|.+.+|.+. .++. .|..+.+++.+.+..|.+. ...|.+++...-..
T Consensus 149 an~i~Cir~~al~dL~~l~lLslyDn~~q-~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~ietsgarc~~ 227 (498)
T KOG4237|consen 149 ANHINCIRQDALRDLPSLSLLSLYDNKIQ-SICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMNPIETSGARCVS 227 (498)
T ss_pred hhhhcchhHHHHHHhhhcchhcccchhhh-hhccccccchhccchHhhhcCccccccccchhhhHHhhchhhcccceecc
Confidence 77777666667777777777777777776 3444 6677777777777766632 11222222222222
Q ss_pred EEEccCCcCCccCCcccCC-CCCCCEEEccCccCccccCCCccCCCCcccEEEccCCCCCCCCCcccCCCCCCCEEEccC
Q 004248 266 DLDLSMNSLSGSVPSELRG-LRSLQKFVIGNNFLSGNLSVNLFPTVSQLQIIVLRQNGFTGPPPDVLWSMPQLRLLDISR 344 (766)
Q Consensus 266 ~L~Ls~N~l~g~~p~~l~~-l~~L~~L~ls~N~l~g~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~ 344 (766)
...+.++++...-+..|.. +.++..-..+.....+.-|..-|..+++|+.|+|++|+++++-+.+|.....++.|.|..
T Consensus 228 p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~~ 307 (498)
T KOG4237|consen 228 PYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAAELQELYLTR 307 (498)
T ss_pred hHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhhcchhhhhhhhcCc
Confidence 2223333222211111110 001100011111222233333445555555555555555555555555555555555555
Q ss_pred CCCCCCCCcccccCCCCCcEEEccCCcCccCCCc---CCCCCCEEeccCCcCc
Q 004248 345 NNFTGPLPNSRSNVNTSTVELNISQNMFYGGLTP---VLGRFRLVDLSGNYFE 394 (766)
Q Consensus 345 N~l~g~~p~~~~~~~~~l~~L~ls~N~l~g~~~~---~l~~l~~ldLs~N~l~ 394 (766)
|++. .+....+.....|..|+|.+|+++.-.|. .+..|..|+|-.|.|.
T Consensus 308 N~l~-~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~ 359 (498)
T KOG4237|consen 308 NKLE-FVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFN 359 (498)
T ss_pred chHH-HHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCccc
Confidence 5554 22222233334444455555544433222 2334445555555543
No 438
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.72 E-value=8.8e-19 Score=171.45 Aligned_cols=194 Identities=18% Similarity=0.310 Sum_probs=151.1
Q ss_pred cceeecCCcceEEEEEEcCCcEEEEEEeeccccC---HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEeeCCCC
Q 004248 539 ANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVK---TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNG 615 (766)
Q Consensus 539 ~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~---~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey~~~G 615 (766)
..+|.+...|+.|+|+++++ .+++|.+..+... .++|..|.-.++-..||||.+++|.|.. .....++..|||.|
T Consensus 195 ~tkl~e~hsgelwrgrwqgn-divakil~vr~~t~risrdfneefp~lrifshpnilpvlgacns-ppnlv~isq~mp~g 272 (448)
T KOG0195|consen 195 ITKLAESHSGELWRGRWQGN-DIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNS-PPNLVIISQYMPFG 272 (448)
T ss_pred hhhhccCCCcccccccccCc-chhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccC-CCCceEeeeeccch
Confidence 34678888999999998855 4566776544332 4679999999999999999999999976 45689999999999
Q ss_pred ChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEec--cchhhhhcCCC
Q 004248 616 DLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLG--SLSEVCAQGGD 693 (766)
Q Consensus 616 sL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~--DFG~a~~~~~~ 693 (766)
+|+.+||+... ...+..+.+++|.+||+|++|||+- .|-|..--+.+..|+||++.++||+ |--++- ...
T Consensus 273 slynvlhe~t~-----vvvd~sqav~faldiargmaflhsl-ep~ipr~~lns~hvmidedltarismad~kfsf--qe~ 344 (448)
T KOG0195|consen 273 SLYNVLHEQTS-----VVVDHSQAVRFALDIARGMAFLHSL-EPMIPRFYLNSKHVMIDEDLTARISMADTKFSF--QEV 344 (448)
T ss_pred HHHHHHhcCcc-----EEEecchHHHHHHHHHhhHHHHhhc-chhhhhhhcccceEEecchhhhheecccceeee--ecc
Confidence 99999997654 3478889999999999999999985 4445555789999999999999884 311111 111
Q ss_pred CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCCc
Q 004248 694 AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSSR 750 (766)
Q Consensus 694 ~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~~ 750 (766)
.....+.+++||.+....... --.++|+|||.++++|+.|...||.+..
T Consensus 345 --gr~y~pawmspealqrkped~------n~raadmwsfaillwel~trevpfadls 393 (448)
T KOG0195|consen 345 --GRAYSPAWMSPEALQRKPEDL------NIRAADMWSFAILLWELNTREVPFADLS 393 (448)
T ss_pred --ccccCcccCCHHHHhcCchhc------chhhhhHHHHHHHHHHhhccccccccCC
Confidence 122357899999887665444 2368999999999999999999996443
No 439
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.72 E-value=2.4e-19 Score=193.26 Aligned_cols=202 Identities=24% Similarity=0.281 Sum_probs=120.6
Q ss_pred EecCCCCCC-CCCchhhhhCCCCCCEEEccCCCCCcc----CCcccCCCCCCcEEEeecCcCCC------CCCccccCCC
Q 004248 122 FNASRFLLP-GSIPDWLGQQLPTLQALDLRSCSISGV----IPFSLGNLTNLTSLYLSDNGLTG------TIPSSLGQLS 190 (766)
Q Consensus 122 L~ls~n~l~-g~ip~~~~~~l~~L~~L~Ls~N~l~g~----~p~~l~~l~~L~~L~Ls~N~l~~------~~p~~l~~L~ 190 (766)
|+|..+.+. +..+..+. .+.+|+.|++++|.++.. ++..+...++|++|+++++.+.+ .++..+..++
T Consensus 3 l~L~~~~l~~~~~~~~~~-~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~ 81 (319)
T cd00116 3 LSLKGELLKTERATELLP-KLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGC 81 (319)
T ss_pred cccccCcccccchHHHHH-HHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcC
Confidence 456666665 33444443 377789999999888543 55566777888888888887762 2334566677
Q ss_pred CCCEEEccCCCCCCCCCcccCCCCC---CCEEeccCCcCCC----CCCCCCCCC-CCccEEEccCCCCCCC----Ccccc
Q 004248 191 VLSVLDLSRNSLTGNIPTSFGLLKN---LSSLDISSNYLTG----SIPPGLGTL-SKLQYLNVSNNSLASS----IPAQL 258 (766)
Q Consensus 191 ~L~~L~Ls~N~l~~~~p~~~~~l~~---L~~L~Ls~N~l~~----~~p~~l~~l-~~L~~L~Ls~N~l~~~----~p~~l 258 (766)
+|+.|++++|.+.+..+..+..+.+ |++|++++|++++ .+...+..+ ++|+.|++++|.+++. ++..+
T Consensus 82 ~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~ 161 (319)
T cd00116 82 GLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKAL 161 (319)
T ss_pred ceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHH
Confidence 8888888888877655555554444 7777777777762 222334455 6777777777777642 23344
Q ss_pred CCCCCCCEEEccCCcCCcc----CCcccCCCCCCCEEEccCccCccccCC---CccCCCCcccEEEccCCCCC
Q 004248 259 GDLDSLVDLDLSMNSLSGS----VPSELRGLRSLQKFVIGNNFLSGNLSV---NLFPTVSQLQIIVLRQNGFT 324 (766)
Q Consensus 259 ~~l~~L~~L~Ls~N~l~g~----~p~~l~~l~~L~~L~ls~N~l~g~~~~---~~~~~l~~L~~L~L~~N~l~ 324 (766)
..+++|++|++++|.+++. ++..+..+++|+.|++++|.+++.-.. ..+..+++|+.|++++|.++
T Consensus 162 ~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~ 234 (319)
T cd00116 162 RANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLT 234 (319)
T ss_pred HhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCc
Confidence 5556677777777766632 223344445666666666655422110 01233344555555555444
No 440
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.72 E-value=1.1e-19 Score=166.61 Aligned_cols=156 Identities=31% Similarity=0.554 Sum_probs=80.1
Q ss_pred ccCCCCCEEecCCCCCCCCCchhhhhCCCCCCEEEccCCCCCccCCcccCCCCCCcEEEeecCcCCCCCCccccCCCCCC
Q 004248 114 VNLTHLASFNASRFLLPGSIPDWLGQQLPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPSSLGQLSVLS 193 (766)
Q Consensus 114 ~~l~~L~~L~ls~n~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~ 193 (766)
.++++++.|.+|+|.++ .+|+.+.. |.+|+.|++++|++. .+|.+++.+++|+.|+++-|++. .+|..|+.++.|+
T Consensus 30 f~~s~ITrLtLSHNKl~-~vppnia~-l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~le 105 (264)
T KOG0617|consen 30 FNMSNITRLTLSHNKLT-VVPPNIAE-LKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALE 105 (264)
T ss_pred cchhhhhhhhcccCcee-ecCCcHHH-hhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhh
Confidence 34444445555555543 34444443 555555555555554 34445555555555555555554 4555555555555
Q ss_pred EEEccCCCCCC-CCCcccCCCCCCCEEeccCCcCCCCCCCCCCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCC
Q 004248 194 VLDLSRNSLTG-NIPTSFGLLKNLSSLDISSNYLTGSIPPGLGTLSKLQYLNVSNNSLASSIPAQLGDLDSLVDLDLSMN 272 (766)
Q Consensus 194 ~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N 272 (766)
+|||++|++.. .+|..|..++.|+.|+|++|.+. .+|+.++++++|+.|.+.+|.+- .+|.+++.++.|++|.+.+|
T Consensus 106 vldltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqgn 183 (264)
T KOG0617|consen 106 VLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQGN 183 (264)
T ss_pred hhhccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhcccc
Confidence 55555555432 34555555555555555555554 44555555555555555555543 34555555555555555555
Q ss_pred cCC
Q 004248 273 SLS 275 (766)
Q Consensus 273 ~l~ 275 (766)
+++
T Consensus 184 rl~ 186 (264)
T KOG0617|consen 184 RLT 186 (264)
T ss_pred eee
Confidence 554
No 441
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.71 E-value=2.6e-17 Score=189.48 Aligned_cols=137 Identities=21% Similarity=0.211 Sum_probs=110.2
Q ss_pred hCCCCccceeecCCcceEEEEEEcCCcEEEEEE-eeccc--------cCHHHHHHHHHHHhhcCCCCcccceeEEEecCC
Q 004248 533 TGDFSDANLIKNGHSGDLFRGILEGGIPVVIKR-IDLQS--------VKTEAYLLELDFFSKVSHARLVPLLGHCMEREN 603 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~-l~~~~--------~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~ 603 (766)
...|...++||+|+||.||+|...+.. +++|+ +.... ...+++.+|++++++++|++++....++.. +.
T Consensus 332 ~~~~~~~~~iG~G~~g~Vy~~~~~~~~-~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~-~~ 409 (535)
T PRK09605 332 KRRKIPDHLIGKGAEADIKKGEYLGRD-AVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVD-PE 409 (535)
T ss_pred ccccCccceeccCCcEEEEEEeecCcc-ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEe-CC
Confidence 344566799999999999999876544 44443 22111 113568899999999999999887776665 45
Q ss_pred cEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEecc
Q 004248 604 EKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGS 683 (766)
Q Consensus 604 ~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~D 683 (766)
..++||||+++++|.+++. .+..++.+++++|.|||+. +|+|||+||+|||+ +++.++|+|
T Consensus 410 ~~~lv~E~~~g~~L~~~l~---------------~~~~~~~~i~~~L~~lH~~---giiHrDlkp~NILl-~~~~~~liD 470 (535)
T PRK09605 410 EKTIVMEYIGGKDLKDVLE---------------GNPELVRKVGEIVAKLHKA---GIVHGDLTTSNFIV-RDDRLYLID 470 (535)
T ss_pred CCEEEEEecCCCcHHHHHH---------------HHHHHHHHHHHHHHHHHhC---CCccCCCChHHEEE-ECCcEEEEe
Confidence 6799999999999998874 3467899999999999997 99999999999999 678999999
Q ss_pred chhhhhc
Q 004248 684 LSEVCAQ 690 (766)
Q Consensus 684 FG~a~~~ 690 (766)
||+++..
T Consensus 471 FGla~~~ 477 (535)
T PRK09605 471 FGLGKYS 477 (535)
T ss_pred CcccccC
Confidence 9999764
No 442
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.71 E-value=4.2e-17 Score=163.29 Aligned_cols=130 Identities=19% Similarity=0.202 Sum_probs=105.5
Q ss_pred eeecCCcceEEEEEEcCCcEEEEEEeecccc---------CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEee
Q 004248 541 LIKNGHSGDLFRGILEGGIPVVIKRIDLQSV---------KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKY 611 (766)
Q Consensus 541 ~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~---------~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey 611 (766)
.||+|+||.||+|.. +|..|++|....... ..+++.+|++++..++|+++.....++.. ++..++||||
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~-~~~~~lv~e~ 78 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVD-PDNKTIVMEY 78 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE-CCCCEEEEEE
Confidence 489999999999984 567899998643211 12567889999999999886655554544 4567999999
Q ss_pred CCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhc
Q 004248 612 MPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQ 690 (766)
Q Consensus 612 ~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~ 690 (766)
++|++|.+++.... . .++.+++++|+++|+. +++|||+||+||+++ ++.+++.|||.++..
T Consensus 79 ~~g~~l~~~~~~~~--------~------~~~~~i~~~l~~lH~~---gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~~ 139 (199)
T TIGR03724 79 IEGKPLKDVIEEGN--------D------ELLREIGRLVGKLHKA---GIVHGDLTTSNIIVR-DDKLYLIDFGLGKYS 139 (199)
T ss_pred ECCccHHHHHhhcH--------H------HHHHHHHHHHHHHHHC---CeecCCCCcceEEEE-CCcEEEEECCCCcCC
Confidence 99999998875321 0 7899999999999997 999999999999999 899999999998753
No 443
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.68 E-value=7.2e-19 Score=161.25 Aligned_cols=126 Identities=33% Similarity=0.529 Sum_probs=55.5
Q ss_pred CcEEEeecCcCCCCCCccccCCCCCCEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCCCCCCCccEEEccC
Q 004248 168 LTSLYLSDNGLTGTIPSSLGQLSVLSVLDLSRNSLTGNIPTSFGLLKNLSSLDISSNYLTGSIPPGLGTLSKLQYLNVSN 247 (766)
Q Consensus 168 L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~ 247 (766)
.+.|-||+|+++ .+|+.+..|.+|++|++++|+++ .+|.+++.+++|+.|+++-|++. .+|.+|+.++.|+.|||.+
T Consensus 35 ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levldlty 111 (264)
T KOG0617|consen 35 ITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVLDLTY 111 (264)
T ss_pred hhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhhhhccc
Confidence 333344444443 33334444444444444444443 34444444444444444444443 3444444444444444444
Q ss_pred CCCCC-CCccccCCCCCCCEEEccCCcCCccCCcccCCCCCCCEEEccCcc
Q 004248 248 NSLAS-SIPAQLGDLDSLVDLDLSMNSLSGSVPSELRGLRSLQKFVIGNNF 297 (766)
Q Consensus 248 N~l~~-~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~ 297 (766)
|+++. .+|..|..++.|+.|+|++|.|. .+|..++++++|+.|.+..|.
T Consensus 112 nnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdnd 161 (264)
T KOG0617|consen 112 NNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDND 161 (264)
T ss_pred cccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCc
Confidence 44432 23444444444555555555543 344444444444444444433
No 444
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.67 E-value=4.2e-17 Score=168.30 Aligned_cols=208 Identities=20% Similarity=0.174 Sum_probs=133.8
Q ss_pred CCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC----HHHHHHHHHHHhhcCC-----------CCcccceeEEE
Q 004248 536 FSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK----TEAYLLELDFFSKVSH-----------ARLVPLLGHCM 599 (766)
Q Consensus 536 ~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~----~~~~~~E~~~l~~l~H-----------~niv~l~~~~~ 599 (766)
+...+.||.|+++.||.++. ++|+.+|||........ .+++.+|.-....+.+ .-++++ +...
T Consensus 14 l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~-d~~~ 92 (288)
T PF14531_consen 14 LVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPL-DLLR 92 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---S-EEEE
T ss_pred EEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeee-EEEE
Confidence 34568899999999999996 56999999988543322 4567777755555433 222222 2111
Q ss_pred --------ecC--C------cEEEEEeeCCCCChhhhhh---ccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCC
Q 004248 600 --------ERE--N------EKFLVYKYMPNGDLSSSLY---RKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLP 660 (766)
Q Consensus 600 --------~~~--~------~~~lV~Ey~~~GsL~~~l~---~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ 660 (766)
+.. . ..+++|+-+. +||.+++. .... ....+....|..+..|+++.+++||+. +
T Consensus 93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~-~dL~~~~~~l~~~~~---~~~~l~~~arl~lT~Q~I~lvA~Lh~~---G 165 (288)
T PF14531_consen 93 IPGKPPFFERGPGQSIYWVLNRFLLMPRAQ-GDLQDLVEALFSRAQ---THSPLAFAARLSLTVQMIRLVANLHSY---G 165 (288)
T ss_dssp ETTS-SEEEECETTEEEEEESEEEEEE--S-EEHHHHHHHHHHHTT---TSHHHHHHHHHHHHHHHHHHHHHHHHT---T
T ss_pred EcCCCcceecCCCCccceeehhhhccchhh-hcHHHHHHHHhhccc---ccchhHHHHHHHHHHHHHHHHHHHhhc---c
Confidence 101 1 2367888885 69988754 2221 112355677888889999999999998 9
Q ss_pred eEecCCCCCCeeeCCCCcEEeccchhhhhcCCCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHh
Q 004248 661 FVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAI 740 (766)
Q Consensus 661 iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ell 740 (766)
+||+||||+|++++.+|.++|+||+.....+........+..|.+||....... +......+|.+.|.|++|+++|.|.
T Consensus 166 lVHgdi~~~nfll~~~G~v~Lg~F~~~~r~g~~~~~~~~~~~~~PPe~~~~~~~-~~~~~~~~t~~~DaW~LG~~ly~lW 244 (288)
T PF14531_consen 166 LVHGDIKPENFLLDQDGGVFLGDFSSLVRAGTRYRCSEFPVAFTPPELESCAGQ-FGQNNAPYTFATDAWQLGITLYSLW 244 (288)
T ss_dssp EEEST-SGGGEEE-TTS-EEE--GGGEEETTEEEEGGGS-TTTS-HHHHHHHTS-CHHSEEEE-HHHHHHHHHHHHHHHH
T ss_pred eEecccceeeEEEcCCCCEEEcChHHHeecCceeeccCCCcccCChhhhhhhcc-cCcccceeeeccCHHHHHHHHHHHH
Confidence 999999999999999999999999987766544333344567888885432110 1112234799999999999999999
Q ss_pred cCCCCCCCCccc
Q 004248 741 FNNHLNLSSRFG 752 (766)
Q Consensus 741 tG~~p~~~~~~~ 752 (766)
+|+.||....+.
T Consensus 245 C~~lPf~~~~~~ 256 (288)
T PF14531_consen 245 CGRLPFGLSSPE 256 (288)
T ss_dssp HSS-STCCCGGG
T ss_pred HccCCCCCCCcc
Confidence 999999654443
No 445
>PLN03150 hypothetical protein; Provisional
Probab=99.66 E-value=4.4e-16 Score=181.24 Aligned_cols=157 Identities=38% Similarity=0.629 Sum_probs=89.1
Q ss_pred ccCCHHHHHHHHHHHHhCCCCC-CCCCCCCCCCC----CccceeecCCCEEEEEcCCCCcCCCCCCCCccchhhhccCCC
Q 004248 44 RLSSRTELAALFELRSSLGLRR-RDWPRKVDPCL----VWNGVRCQNGSVVGINISGFRRTRLGSQNPRFAADALVNLTH 118 (766)
Q Consensus 44 ~~~~~~~~~aLl~~k~~l~~~~-~~W~~~~~~C~----~W~gv~C~~~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~~ 118 (766)
..+.++|.+||+++|+++.... .+|+. |+|+ .|.||.|.....+ +
T Consensus 367 ~~t~~~~~~aL~~~k~~~~~~~~~~W~g--~~C~p~~~~w~Gv~C~~~~~~------------~---------------- 416 (623)
T PLN03150 367 SKTLLEEVSALQTLKSSLGLPLRFGWNG--DPCVPQQHPWSGADCQFDSTK------------G---------------- 416 (623)
T ss_pred cccCchHHHHHHHHHHhcCCcccCCCCC--CCCCCcccccccceeeccCCC------------C----------------
Confidence 3456789999999999987543 48963 6774 7999999521000 0
Q ss_pred CCEEecCCCCCCCCCchhhhhCCCCCCEEEccCCCCCccCCcccCCCCCCcEEEeecCcCCCCCCccccCCCCCCEEEcc
Q 004248 119 LASFNASRFLLPGSIPDWLGQQLPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPSSLGQLSVLSVLDLS 198 (766)
Q Consensus 119 L~~L~ls~n~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls 198 (766)
...++.|+|++|.++|.+|..++++++|+.|+|++|+++|.+|..++++++|+.|+|+
T Consensus 417 ----------------------~~~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs 474 (623)
T PLN03150 417 ----------------------KWFIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLS 474 (623)
T ss_pred ----------------------ceEEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECC
Confidence 0112334444444444444444555555555555555555555555555555555555
Q ss_pred CCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCCCCC-CCccEEEccCCCCCC
Q 004248 199 RNSLTGNIPTSFGLLKNLSSLDISSNYLTGSIPPGLGTL-SKLQYLNVSNNSLAS 252 (766)
Q Consensus 199 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l-~~L~~L~Ls~N~l~~ 252 (766)
+|+++|.+|..++++++|+.|+|++|+++|.+|..++.+ .++..+++.+|....
T Consensus 475 ~N~lsg~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc 529 (623)
T PLN03150 475 YNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAALGGRLLHRASFNFTDNAGLC 529 (623)
T ss_pred CCCCCCCCchHHhcCCCCCEEECcCCcccccCChHHhhccccCceEEecCCcccc
Confidence 555555555555555555555555555555555555432 345566777775443
No 446
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.65 E-value=1.3e-18 Score=178.83 Aligned_cols=258 Identities=21% Similarity=0.255 Sum_probs=195.8
Q ss_pred CCCEEEccCCCCCccCCcccCCCCCCcEEEeecCcCCCCCCccccCCCCCCEEEccC-CCCCCCCCcccCCCCCCCEEec
Q 004248 143 TLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPSSLGQLSVLSVLDLSR-NSLTGNIPTSFGLLKNLSSLDI 221 (766)
Q Consensus 143 ~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~L 221 (766)
.-..++|..|+|+.+.|.+|+.+++|+.||||+|+|+.+-|+.|.+|.+|..|-+.+ |+|+...-..|++|..|+.|.+
T Consensus 68 ~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLll 147 (498)
T KOG4237|consen 68 ETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLLL 147 (498)
T ss_pred cceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHhc
Confidence 346799999999999999999999999999999999988999999999988877665 9998766678999999999999
Q ss_pred cCCcCCCCCCCCCCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCcCC------------ccCCcccCCCCCCC
Q 004248 222 SSNYLTGSIPPGLGTLSKLQYLNVSNNSLASSIPAQLGDLDSLVDLDLSMNSLS------------GSVPSELRGLRSLQ 289 (766)
Q Consensus 222 s~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~------------g~~p~~l~~l~~L~ 289 (766)
.-|++.-...+.|..|++|..|.+.+|.+...--..+..+.+++.+.+..|.+- ...|..+++.+-..
T Consensus 148 Nan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~ietsgarc~~ 227 (498)
T KOG4237|consen 148 NANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMNPIETSGARCVS 227 (498)
T ss_pred ChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccccccccchhhhHHhhchhhcccceecc
Confidence 999999888888999999999999999997443348889999999999999843 12333344444444
Q ss_pred EEEccCccCccccCCCccC-CCCcccEEEccCCCCCCC-CCcccCCCCCCCEEEccCCCCCCCCCcccccCCCCCcEEEc
Q 004248 290 KFVIGNNFLSGNLSVNLFP-TVSQLQIIVLRQNGFTGP-PPDVLWSMPQLRLLDISRNNFTGPLPNSRSNVNTSTVELNI 367 (766)
Q Consensus 290 ~L~ls~N~l~g~~~~~~~~-~l~~L~~L~L~~N~l~~~-~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~L~l 367 (766)
-..+.++.+. .++..-|. .+..+..-..+.....++ +...|..+++|+.|+|++|++++.-+ ..+.....+++|.|
T Consensus 228 p~rl~~~Ri~-q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~-~aFe~~a~l~eL~L 305 (498)
T KOG4237|consen 228 PYRLYYKRIN-QEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIED-GAFEGAAELQELYL 305 (498)
T ss_pred hHHHHHHHhc-ccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhh-hhhcchhhhhhhhc
Confidence 3444444432 22222121 111221111222323333 44579999999999999999996555 45567789999999
Q ss_pred cCCcCc---cCCCcCCCCCCEEeccCCcCccccChhhh
Q 004248 368 SQNMFY---GGLTPVLGRFRLVDLSGNYFEGRVPEYVH 402 (766)
Q Consensus 368 s~N~l~---g~~~~~l~~l~~ldLs~N~l~g~~p~~~~ 402 (766)
..|++. +.....+..|+.|+|++|+++-..|..+.
T Consensus 306 ~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~ 343 (498)
T KOG4237|consen 306 TRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQ 343 (498)
T ss_pred CcchHHHHHHHhhhccccceeeeecCCeeEEEeccccc
Confidence 999874 56677889999999999999988787663
No 447
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.64 E-value=2.6e-16 Score=155.81 Aligned_cols=134 Identities=17% Similarity=0.193 Sum_probs=98.4
Q ss_pred cceeecCCcceEEEEEEcCCcEEEEEEeeccccC---HHH----------------------HHHHHHHHhhcCCCC--c
Q 004248 539 ANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVK---TEA----------------------YLLELDFFSKVSHAR--L 591 (766)
Q Consensus 539 ~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~---~~~----------------------~~~E~~~l~~l~H~n--i 591 (766)
.+.||+|+||.||+|...+|+.||||++...... ... ...|.+.+.++.+.. +
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 4679999999999999888999999998653221 111 135666677765543 3
Q ss_pred ccceeEEEecCCcEEEEEeeCCCCChhhh-hhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhcc-CCCCCeEecCCCCC
Q 004248 592 VPLLGHCMERENEKFLVYKYMPNGDLSSS-LYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHH-ECTLPFVHRDVQAS 669 (766)
Q Consensus 592 v~l~~~~~~~~~~~~lV~Ey~~~GsL~~~-l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~iiHrDlKp~ 669 (766)
.+.++ + ...++||||+++|++... +.... .. .+...++.+++.++.++|. . +|+||||||+
T Consensus 82 ~~~~~-~----~~~~lv~e~~~g~~~~~~~l~~~~--------~~-~~~~~~~~~~~~~l~~lh~~~---~ivH~Dl~p~ 144 (187)
T cd05119 82 PKPID-L----NRHVLVMEFIGGDGIPAPRLKDVR--------LL-EDPEELYDQILELMRKLYREA---GLVHGDLSEY 144 (187)
T ss_pred CceEe-c----CCCEEEEEEeCCCCccChhhhhhh--------hc-ccHHHHHHHHHHHHHHHhhcc---CcCcCCCChh
Confidence 33332 1 246899999999664322 21110 11 5567899999999999998 6 9999999999
Q ss_pred CeeeCCCCcEEeccchhhhhc
Q 004248 670 SILLDDKFEVRLGSLSEVCAQ 690 (766)
Q Consensus 670 NILl~~~~~~kl~DFG~a~~~ 690 (766)
||+++ ++.++++|||.+...
T Consensus 145 Nili~-~~~~~liDfg~a~~~ 164 (187)
T cd05119 145 NILVD-DGKVYIIDVPQAVEI 164 (187)
T ss_pred hEEEE-CCcEEEEECcccccc
Confidence 99999 899999999998654
No 448
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.63 E-value=1.9e-15 Score=143.21 Aligned_cols=135 Identities=17% Similarity=0.145 Sum_probs=111.9
Q ss_pred ccceeecCCcceEEEEEEcCCcEEEEEEeeccccCHHHHHHHHHHHhhcCC--CCcccceeEEEecCCcEEEEEeeCCCC
Q 004248 538 DANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSH--ARLVPLLGHCMERENEKFLVYKYMPNG 615 (766)
Q Consensus 538 ~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~H--~niv~l~~~~~~~~~~~~lV~Ey~~~G 615 (766)
+.+.||+|.++.||++...+ ..+++|....... ..++.+|+.++..++| .++.+++++... .+..+++|||++++
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~-~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~-~~~~~~v~e~~~g~ 78 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK-GADREREVAILQLLARKGLPVPKVLASGES-DGWSYLLMEWIEGE 78 (155)
T ss_pred cceecccccccceEEEEecC-CeEEEEecCCCCc-hhHHHHHHHHHHHHHHcCCCCCeEEEEcCC-CCccEEEEEecCCe
Confidence 45789999999999999765 7899999865433 5679999999999987 488888875543 46789999999987
Q ss_pred ChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhh
Q 004248 616 DLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCA 689 (766)
Q Consensus 616 sL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~ 689 (766)
.+..+ ++.....++.+++++++++|....++++|||+||+||++++.+.+++.|||.++.
T Consensus 79 ~~~~~--------------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 79 TLDEV--------------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred ecccC--------------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 66543 4556778899999999999986445799999999999999989999999998864
No 449
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.62 E-value=5.7e-16 Score=169.76 Aligned_cols=155 Identities=20% Similarity=0.319 Sum_probs=125.7
Q ss_pred HhhcCCCCcccceeEEEecCCcEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCe-
Q 004248 583 FSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPF- 661 (766)
Q Consensus 583 l~~l~H~niv~l~~~~~~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~i- 661 (766)
|+.+.|.|+.+++|.+... ...+.|.+||+.|+|.+.+.... ..++|.....+.++|+.||+|+|+- +|
T Consensus 1 l~~l~h~n~~~f~g~~~~~-~~~~~i~~~c~rGsl~D~i~~~~------~~~d~~F~~s~~rdi~~Gl~ylh~s---~i~ 70 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDG-PEMIVIWEYCSRGSLLDILSNED------IKLDYFFILSFIRDISKGLAYLHNS---PIG 70 (484)
T ss_pred CcccchhhhhhheeeEecC-CceEEEEeeecCccHHhHHhccc------cCccHHHHHHHHHHHHHHHHHHhcC---cce
Confidence 4678999999999999974 78999999999999999997632 4599999999999999999999985 44
Q ss_pred EecCCCCCCeeeCCCCcEEeccchhhhhcCC-----CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHH
Q 004248 662 VHRDVQASSILLDDKFEVRLGSLSEVCAQGG-----DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPL 736 (766)
Q Consensus 662 iHrDlKp~NILl~~~~~~kl~DFG~a~~~~~-----~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl 736 (766)
.|+.++++|+++|....+|++|||+.....+ ..+...-...|.|||.+........ ....+.++||||||+++
T Consensus 71 ~hg~l~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~--~~~~~~~gdiYs~~ii~ 148 (484)
T KOG1023|consen 71 YHGALKSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSL--ESALTQKGDIYSFGIIM 148 (484)
T ss_pred eeeeeccccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccc--cccccccCCeehHHHHH
Confidence 8999999999999999999999999876531 1222223446899998765432221 01147899999999999
Q ss_pred HHHhcCCCCCCCC
Q 004248 737 FSAIFNNHLNLSS 749 (766)
Q Consensus 737 ~elltG~~p~~~~ 749 (766)
+|+++.+.||...
T Consensus 149 ~ei~~r~~~~~~~ 161 (484)
T KOG1023|consen 149 YEILFRSGPFDLR 161 (484)
T ss_pred HHHHhccCccccc
Confidence 9999999999653
No 450
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.62 E-value=8e-17 Score=183.96 Aligned_cols=198 Identities=17% Similarity=0.183 Sum_probs=148.1
Q ss_pred CCCccceeecCCcceEEEEEEcCCcEEEEEEeeccc--cCHHHHHHHHHH--HhhcCCCCcccceeEEEecCCcEEEEEe
Q 004248 535 DFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQS--VKTEAYLLELDF--FSKVSHARLVPLLGHCMERENEKFLVYK 610 (766)
Q Consensus 535 ~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~--~~~~~~~~E~~~--l~~l~H~niv~l~~~~~~~~~~~~lV~E 610 (766)
+|...+-+|++.|=+|.||+.+.|. |+||++-+.. ...+.|.++++- ..-++|||.+++... ...+...|+|-+
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~-~~t~kAAylvRq 101 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKV-LVTDKAAYLVRQ 101 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHH-HHhhHHHHHHHH
Confidence 5667789999999999999988886 9999885443 223445443332 455689999998764 333456799999
Q ss_pred eCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhc
Q 004248 611 YMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQ 690 (766)
Q Consensus 611 y~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~ 690 (766)
|..+ +|+|.|..+. .+...+.+-||.|+..|+.-+|.. +|.|+|||.+||||++..-+.|+||.--+..
T Consensus 102 yvkh-nLyDRlSTRP-------FL~~iEKkWiaFQLL~al~qcH~~---gVcHGDIKsENILiTSWNW~~LtDFAsFKPt 170 (1431)
T KOG1240|consen 102 YVKH-NLYDRLSTRP-------FLVLIEKKWIAFQLLKALSQCHKL---GVCHGDIKSENILITSWNWLYLTDFASFKPT 170 (1431)
T ss_pred HHhh-hhhhhhccch-------HHHHHHHHHHHHHHHHHHHHHHHc---CccccccccceEEEeeechhhhhcccccCCc
Confidence 9986 9999986553 377788888999999999999997 9999999999999999999999999865532
Q ss_pred --C-CCCc-------cceeeecccCCCCCCCCceeee--e-eeeecccccceecchHHHHHHhc-CCCCC
Q 004248 691 --G-GDAH-------QSRITRLLRLPQSSEQGSSGMV--I-YLFIIFTIFHIYFHGNPLFSAIF-NNHLN 746 (766)
Q Consensus 691 --~-~~~~-------~~~~t~~y~aPe~~~~~~~g~~--~-~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~ 746 (766)
. +... ++..-..|.|||.+.... |+. . .-+..+++.||+|.|||++|+++ |++||
T Consensus 171 YLPeDNPadf~fFFDTSrRRtCYiAPERFv~~~-~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF 239 (1431)
T KOG1240|consen 171 YLPEDNPADFTFFFDTSRRRTCYIAPERFVSAL-GKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLF 239 (1431)
T ss_pred cCCCCCcccceEEEecCCceeeecChHhhhccc-cccccCCcccccChhhhhhhhhHHHHHHHhcCCCcc
Confidence 1 1111 112233699999664422 111 1 12237899999999999999998 67777
No 451
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.61 E-value=3.1e-15 Score=153.54 Aligned_cols=136 Identities=15% Similarity=0.145 Sum_probs=105.8
Q ss_pred cceee-cCCcceEEEEEEcCCcEEEEEEeeccc--------------cCHHHHHHHHHHHhhcCCCCc--ccceeEEEec
Q 004248 539 ANLIK-NGHSGDLFRGILEGGIPVVIKRIDLQS--------------VKTEAYLLELDFFSKVSHARL--VPLLGHCMER 601 (766)
Q Consensus 539 ~~~ig-~G~~g~Vy~~~~~~g~~vavK~l~~~~--------------~~~~~~~~E~~~l~~l~H~ni--v~l~~~~~~~ 601 (766)
..+|| .|+.|+||++... +..+|||+..... ....++.+|++++.+++|++| ++.+++....
T Consensus 36 ~~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred CceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 46788 8999999999875 6689999875321 113468899999999998885 6677654432
Q ss_pred CCc---EEEEEeeCCC-CChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCC
Q 004248 602 ENE---KFLVYKYMPN-GDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKF 677 (766)
Q Consensus 602 ~~~---~~lV~Ey~~~-GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~ 677 (766)
... .++||||+++ ++|.+++.+. .++.. .+.+++.++.+||+. +|+||||||+|||++.++
T Consensus 115 ~~~~~~~~lV~e~l~G~~~L~~~l~~~--------~l~~~----~~~~i~~~l~~lH~~---GI~HrDlkp~NILv~~~~ 179 (239)
T PRK01723 115 HGLFYRADILIERIEGARDLVALLQEA--------PLSEE----QWQAIGQLIARFHDA---GVYHADLNAHNILLDPDG 179 (239)
T ss_pred cCcceeeeEEEEecCCCCCHHHHHhcC--------CCCHH----HHHHHHHHHHHHHHC---CCCCCCCCchhEEEcCCC
Confidence 222 3599999997 6899888532 14433 356899999999998 999999999999999999
Q ss_pred cEEeccchhhhhc
Q 004248 678 EVRLGSLSEVCAQ 690 (766)
Q Consensus 678 ~~kl~DFG~a~~~ 690 (766)
.++|+|||.++..
T Consensus 180 ~v~LIDfg~~~~~ 192 (239)
T PRK01723 180 KFWLIDFDRGELR 192 (239)
T ss_pred CEEEEECCCcccC
Confidence 9999999988653
No 452
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.60 E-value=5.9e-16 Score=180.83 Aligned_cols=191 Identities=14% Similarity=0.156 Sum_probs=144.4
Q ss_pred HhCCCCccceeecCCcceEEEEEEcCCcEEEEEEeeccccCHHHHHHHHHHHhhcC---CCCcccceeEEEecCCcEEEE
Q 004248 532 ATGDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVS---HARLVPLLGHCMERENEKFLV 608 (766)
Q Consensus 532 ~~~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~---H~niv~l~~~~~~~~~~~~lV 608 (766)
..+.|.+.+.||+|+||+||+|...+|+.||+|.=+..... +|.-=.+++.+|+ -+-|.++...+.. .+.-++|
T Consensus 696 ~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~W--EfYI~~q~~~RLk~~~~~~~~~~~~a~~~-~~~S~lv 772 (974)
T KOG1166|consen 696 GGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPW--EFYICLQVMERLKPQMLPSIMHISSAHVF-QNASVLV 772 (974)
T ss_pred cceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCce--eeeehHHHHHhhchhhhcchHHHHHHHcc-CCcceee
Confidence 34567788999999999999999777999999986543321 2322334555555 1233444432322 3457999
Q ss_pred EeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCC-------CCcEEe
Q 004248 609 YKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDD-------KFEVRL 681 (766)
Q Consensus 609 ~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~-------~~~~kl 681 (766)
+||.+.|+|.+++...+ .++|.-.+.++.|+++-+++||.. +|||+||||+|.||.. ..-++|
T Consensus 773 ~ey~~~Gtlld~~N~~~-------~m~e~lv~~~~~qml~ive~lH~~---~IIHgDiKPDNfll~~~~~~~~~~~~l~l 842 (974)
T KOG1166|consen 773 SEYSPYGTLLDLINTNK-------VMDEYLVMFFSCQMLRIVEHLHAM---GIIHGDIKPDNFLLRREICADSDSKGLYL 842 (974)
T ss_pred eeccccccHHHhhccCC-------CCCchhhhHHHHHHHHHHHHHHhc---ceecccCCcceeEeecccCCCCcccceEE
Confidence 99999999999997443 389999999999999999999998 9999999999999942 245899
Q ss_pred ccchhhhhc---CC--CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCC
Q 004248 682 GSLSEVCAQ---GG--DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNH 744 (766)
Q Consensus 682 ~DFG~a~~~---~~--~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~ 744 (766)
+|||.+-.. .+ .......|-.+-.+|...+..+. ..+|.|.+..+++-|+.|+.
T Consensus 843 IDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWt---------Yq~DyfGlAa~~h~mLFG~y 901 (974)
T KOG1166|consen 843 IDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWT---------YQIDYFGLAATVHVMLFGKY 901 (974)
T ss_pred EecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCc---------hhhhhHHHHHHHHHHHHHHH
Confidence 999988543 11 23445567777888888777764 47899999999999999983
No 453
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.57 E-value=1.4e-15 Score=174.10 Aligned_cols=162 Identities=21% Similarity=0.262 Sum_probs=116.8
Q ss_pred hCCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccCHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEee
Q 004248 533 TGDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKY 611 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey 611 (766)
..+|+.++.|-.|+||.||..+. .+.+.+|+ ++.++.. +.| ||..+-+ ..+.|
T Consensus 82 e~df~~IklisngAygavylvrh~~trqrfa~-kiNkq~l----ilR-----------nilt~a~-------npfvv--- 135 (1205)
T KOG0606|consen 82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAM-KINKQNL----ILR-----------NILTFAG-------NPFVV--- 135 (1205)
T ss_pred ccccceeEeeccCCCCceeeeeccccccchhh-cccccch----hhh-----------ccccccC-------Cccee---
Confidence 35788999999999999999984 46788998 4433221 111 1222211 12333
Q ss_pred CCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcC
Q 004248 612 MPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQG 691 (766)
Q Consensus 612 ~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~ 691 (766)
||=.+.+...+. ++- +.+.+++|+|+. +|+|||+||+|.+|+.-|++|+.|||+.+...
T Consensus 136 ---gDc~tllk~~g~-------lPv--------dmvla~Eylh~y---givhrdlkpdnllIT~mGhiKlTDfgLsk~GL 194 (1205)
T KOG0606|consen 136 ---GDCATLLKNIGP-------LPV--------DMVLAVEYLHSY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKKGL 194 (1205)
T ss_pred ---chhhhhcccCCC-------Ccc--------hhhHHhHhhccC---CeecCCCCCCcceeeecccccccchhhhhhhh
Confidence 444444433221 221 227899999997 99999999999999999999999999987421
Q ss_pred -------------CC-----CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCCc
Q 004248 692 -------------GD-----AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSSR 750 (766)
Q Consensus 692 -------------~~-----~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~~ 750 (766)
.+ ....++|+.|.|||++....|| ..+|+|++|+|+||-+-|+.||+...
T Consensus 195 ms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgyg---------kpvdwwamGiIlyeFLVgcvpffGdt 262 (1205)
T KOG0606|consen 195 MSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYG---------KPVDWWAMGIILYEFLVGCVPFFGDT 262 (1205)
T ss_pred hhccchhhhcchHHHHHHhhhccccCCccccChhhhhhhccC---------CCccHHHHHHHHHHHheeeeeccCCC
Confidence 01 1235899999999999877665 56799999999999999999997653
No 454
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.52 E-value=1.9e-15 Score=162.43 Aligned_cols=185 Identities=19% Similarity=0.182 Sum_probs=130.7
Q ss_pred ccceeecCCcceEEEEEEcC----CcEEEEEEeeccc-cCHHHHHHHHHHHhhcCCCCccccee-----E--EEe----c
Q 004248 538 DANLIKNGHSGDLFRGILEG----GIPVVIKRIDLQS-VKTEAYLLELDFFSKVSHARLVPLLG-----H--CME----R 601 (766)
Q Consensus 538 ~~~~ig~G~~g~Vy~~~~~~----g~~vavK~l~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~-----~--~~~----~ 601 (766)
..+-.++.++|.+...+... ...++.|+.+.+. .......+++..+....|.+..-+.+ . ... .
T Consensus 248 ~~k~~~~~~~~~~~~~q~~~~~s~~E~~~s~~~~~d~~~~~~~~~r~~~~l~~~~~~~~s~~~d~~~s~~~~~~~~~v~~ 327 (516)
T KOG1033|consen 248 ISKSSERVSSGIVFEKQGKNNSSLREWLKSKRADVDSLCACKYTFRQLGVLVDSSHSNRSILEDLRPSLFESSKRNKVGK 327 (516)
T ss_pred ccccccccccCCchhhhhcccchhhhhccchhhhccchhhhhhhhhhhhheeccccCCcccccCCCCchhhhcccccccc
Confidence 34455666667666655222 3445555554443 22223344555555554444333322 0 000 0
Q ss_pred CCcEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEe
Q 004248 602 ENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRL 681 (766)
Q Consensus 602 ~~~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl 681 (766)
....|+.|++|...+|.+||.+++. ....+|...+.++.|++.|++| + +.+|||+||.||....+.++||
T Consensus 328 ~~~lyI~Mn~c~~~tledWl~rr~~----~e~~s~s~~~~~~~q~~~~~~y---k---~~ihrdlkp~nif~~~d~q~kI 397 (516)
T KOG1033|consen 328 KVYLYIQMNLCEKETLEDWLRRRRT----GEERSLSLMLDIFKQIAPAVEY---K---GLIHRDLKPSNIFFSDDDQLKI 397 (516)
T ss_pred ccchhhhhhhhhhhhHHHHhhCCCc----ccccchhHHHHHHHhhccchhh---c---cchhhhccccccccccchhhhh
Confidence 1247899999999999999975543 1347888899999999999999 4 7999999999999999999999
Q ss_pred ccchhhhhcCC---------CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc
Q 004248 682 GSLSEVCAQGG---------DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF 741 (766)
Q Consensus 682 ~DFG~a~~~~~---------~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt 741 (766)
+|||+...... +.+...||.+||+||.+.+.. |+.|+||||+|++++|+++
T Consensus 398 gDFgl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~---------y~~kvdIyaLGlil~EL~~ 457 (516)
T KOG1033|consen 398 GDFGLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQ---------YSEKVDIYALGLILAELLI 457 (516)
T ss_pred hhhhheeecccCCcccchhhhhhhcccccccCCHHHHhhhh---------hhhhcchhhHHHHHHHHHH
Confidence 99999876522 235568999999999987666 4689999999999999998
No 455
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.51 E-value=5.4e-15 Score=169.79 Aligned_cols=207 Identities=16% Similarity=0.131 Sum_probs=160.2
Q ss_pred CCCccceeecCCcceEEEEEE--cCCcEEEEEEeeccccC---HHHHHHHHHHHhhcC-CCCcccceeEEEecCCcEEEE
Q 004248 535 DFSDANLIKNGHSGDLFRGIL--EGGIPVVIKRIDLQSVK---TEAYLLELDFFSKVS-HARLVPLLGHCMERENEKFLV 608 (766)
Q Consensus 535 ~~~~~~~ig~G~~g~Vy~~~~--~~g~~vavK~l~~~~~~---~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~~lV 608 (766)
.|...+.||+|+|+.|-.... .....+|+|.+...... .++...|..+-..+. |+|++++++...+ .+..+++
T Consensus 21 ~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~-~~~~~~~ 99 (601)
T KOG0590|consen 21 QYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSS-PRSYLLS 99 (601)
T ss_pred cccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCC-Ccccccc
Confidence 456667799999999988874 34567788877544322 334455887777776 9999999996554 5678999
Q ss_pred EeeCCCCChhhhh-hccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhc-cCCCCCeEecCCCCCCeeeCCCC-cEEeccch
Q 004248 609 YKYMPNGDLSSSL-YRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLH-HECTLPFVHRDVQASSILLDDKF-EVRLGSLS 685 (766)
Q Consensus 609 ~Ey~~~GsL~~~l-~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH-~~~~~~iiHrDlKp~NILl~~~~-~~kl~DFG 685 (766)
+||.++|++.+.+ +... ...+......+..|+..|+.|+| +. ++.|||+||+|.+++..+ ..|++|||
T Consensus 100 ~~~s~g~~~f~~i~~~~~------~~~~~~~~~~~~~ql~s~l~~~H~~~---~~~h~~ikP~n~~l~~s~~~l~~~df~ 170 (601)
T KOG0590|consen 100 LSYSDGGSLFSKISHPDS------TGTSSSSASRYLPQLNSGLSYLHPEN---GVTHRDIKPSNSLLDESGSALKIADFG 170 (601)
T ss_pred cCcccccccccccccCCc------cCCCCcchhhhhhhhccCccccCccc---ccccCCCCCccchhccCCCcccCCCch
Confidence 9999999999988 4322 13556667789999999999999 65 899999999999999999 99999999
Q ss_pred hhhhcCC-C-----Ccccee-eecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCCcccccccee
Q 004248 686 EVCAQGG-D-----AHQSRI-TRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSSRFGVKQQTT 758 (766)
Q Consensus 686 ~a~~~~~-~-----~~~~~~-t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~~~~~~~~~~ 758 (766)
+|..... . ....+| +..|+|||......+ ..+..|+||.|+++.-+++|..|++...........
T Consensus 171 ~At~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~--------~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~ 242 (601)
T KOG0590|consen 171 LATAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAY--------RGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSS 242 (601)
T ss_pred hhccccccCCcceeeecccCCCCCCCCcccccchhh--------cCCCcccccccccccccccCCCCcccccccccccee
Confidence 9976633 1 223467 899999998876432 357899999999999999999998655555444444
Q ss_pred e
Q 004248 759 I 759 (766)
Q Consensus 759 ~ 759 (766)
|
T Consensus 243 ~ 243 (601)
T KOG0590|consen 243 W 243 (601)
T ss_pred e
Confidence 3
No 456
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.50 E-value=3.1e-14 Score=146.86 Aligned_cols=147 Identities=17% Similarity=0.222 Sum_probs=105.9
Q ss_pred CCCCcccceeEEEec--------------------------CCcEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHH
Q 004248 587 SHARLVPLLGHCMER--------------------------ENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRL 640 (766)
Q Consensus 587 ~H~niv~l~~~~~~~--------------------------~~~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~ 640 (766)
+|||||++.++|.+. ....|+||.-.+. +|.+++..+. .+...+.
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~~~--------~s~r~~~ 344 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWTRH--------RSYRTGR 344 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhcCC--------CchHHHH
Confidence 699999998875432 1247999988875 9999997543 4555667
Q ss_pred HHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeC--CCC--cEEeccchhhhhcCC---------CCccceeeecccCCC
Q 004248 641 KIAIGAAEGLSYLHHECTLPFVHRDVQASSILLD--DKF--EVRLGSLSEVCAQGG---------DAHQSRITRLLRLPQ 707 (766)
Q Consensus 641 ~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~--~~~--~~kl~DFG~a~~~~~---------~~~~~~~t~~y~aPe 707 (766)
-+..|+.+|+.|||.+ +|.|||+|++|||+. +|+ ...|+|||.+-..+. ..-...|....||||
T Consensus 345 ~~laQlLEav~hL~~h---gvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPE 421 (598)
T KOG4158|consen 345 VILAQLLEAVTHLHKH---GVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPE 421 (598)
T ss_pred HHHHHHHHHHHHHHHc---cchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchh
Confidence 7888999999999998 999999999999994 444 367899998743211 111123445679999
Q ss_pred CCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 708 SSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 708 ~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
+.... .|..+ ..--.|+|.|+.|.+.||+++..-||.+
T Consensus 422 i~ta~-PGp~a--vvny~kAD~WA~GalaYEIfg~~NPFY~ 459 (598)
T KOG4158|consen 422 IATAV-PGPNA--VVNYEKADTWAAGALAYEIFGRSNPFYK 459 (598)
T ss_pred hhhcC-CCCce--eeccchhhhhhhhhhHHHHhccCCcccc
Confidence 65321 11111 0023699999999999999999999964
No 457
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.47 E-value=1.5e-13 Score=153.31 Aligned_cols=141 Identities=17% Similarity=0.125 Sum_probs=102.1
Q ss_pred cceeecCCcceEEEEEEcCCcEEEEEEeeccccC-----------------------------------------HHHHH
Q 004248 539 ANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVK-----------------------------------------TEAYL 577 (766)
Q Consensus 539 ~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~-----------------------------------------~~~~~ 577 (766)
.+.||.|++|.||+|++.+|+.||||+.+..... .-+|.
T Consensus 122 ~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~ 201 (437)
T TIGR01982 122 EKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR 201 (437)
T ss_pred CcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence 3689999999999999999999999998643100 00255
Q ss_pred HHHHHHhhcC----CCCcccceeEEEecCCcEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHH-Hhhh
Q 004248 578 LELDFFSKVS----HARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAE-GLSY 652 (766)
Q Consensus 578 ~E~~~l~~l~----H~niv~l~~~~~~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~-gL~y 652 (766)
+|++.+.+++ |.+-|.+-..|.+.....++||||++|++|.++...... .. .+..++..+++ .+..
T Consensus 202 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~------~~---~~~~ia~~~~~~~l~q 272 (437)
T TIGR01982 202 REAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEA------GL---DRKALAENLARSFLNQ 272 (437)
T ss_pred HHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhc------CC---CHHHHHHHHHHHHHHH
Confidence 6776666652 333333333343323457999999999999987653211 12 24556776666 4678
Q ss_pred hccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcC
Q 004248 653 LHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQG 691 (766)
Q Consensus 653 LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~ 691 (766)
+|+. +++|+|+||.||++++++++++.|||++...+
T Consensus 273 l~~~---g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 273 VLRD---GFFHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred HHhC---CceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 8887 99999999999999999999999999987653
No 458
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.41 E-value=8.8e-15 Score=157.18 Aligned_cols=175 Identities=38% Similarity=0.546 Sum_probs=139.2
Q ss_pred cCCCCCEEecCCCCCCCCCchhhhhCCCCCCEEEccCCCCCccCCcccCCCCCCcEEEeecCcCCCCCCccccCCCCCCE
Q 004248 115 NLTHLASFNASRFLLPGSIPDWLGQQLPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPSSLGQLSVLSV 194 (766)
Q Consensus 115 ~l~~L~~L~ls~n~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~ 194 (766)
.|+.-...|++.|.+. .+|..... +-.|+.|.|..|.+. .+|..++++..|++|||+.|+++ .+|..++.|+ |++
T Consensus 73 ~ltdt~~aDlsrNR~~-elp~~~~~-f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkv 147 (722)
T KOG0532|consen 73 DLTDTVFADLSRNRFS-ELPEEACA-FVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKV 147 (722)
T ss_pred cccchhhhhccccccc-cCchHHHH-HHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-cee
Confidence 4455556778888774 57776655 677888888888887 67888888888888888888887 6787787775 788
Q ss_pred EEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCCCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCcC
Q 004248 195 LDLSRNSLTGNIPTSFGLLKNLSSLDISSNYLTGSIPPGLGTLSKLQYLNVSNNSLASSIPAQLGDLDSLVDLDLSMNSL 274 (766)
Q Consensus 195 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l 274 (766)
|-+++|+++ .+|..++.+..|..||.+.|.+. .+|..++.+.+|+.|++..|++. .+|.++..| .|..||+|.|++
T Consensus 148 li~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~~L-pLi~lDfScNki 223 (722)
T KOG0532|consen 148 LIVSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELCSL-PLIRLDFSCNKI 223 (722)
T ss_pred EEEecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHhCC-ceeeeecccCce
Confidence 888888886 68888888888888888888887 67888888888888888888886 466677755 488888888888
Q ss_pred CccCCcccCCCCCCCEEEccCccCc
Q 004248 275 SGSVPSELRGLRSLQKFVIGNNFLS 299 (766)
Q Consensus 275 ~g~~p~~l~~l~~L~~L~ls~N~l~ 299 (766)
+ .+|-.|.+|+.|++|-|.+|.+.
T Consensus 224 s-~iPv~fr~m~~Lq~l~LenNPLq 247 (722)
T KOG0532|consen 224 S-YLPVDFRKMRHLQVLQLENNPLQ 247 (722)
T ss_pred e-ecchhhhhhhhheeeeeccCCCC
Confidence 7 78888888888888888888876
No 459
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.35 E-value=2.1e-12 Score=145.53 Aligned_cols=143 Identities=15% Similarity=0.120 Sum_probs=95.4
Q ss_pred CCCccceeecCCcceEEEEEEcC-CcEEEEEEeecccc---------------------------C--------HH----
Q 004248 535 DFSDANLIKNGHSGDLFRGILEG-GIPVVIKRIDLQSV---------------------------K--------TE---- 574 (766)
Q Consensus 535 ~~~~~~~ig~G~~g~Vy~~~~~~-g~~vavK~l~~~~~---------------------------~--------~~---- 574 (766)
+|+. +.||+|++|.||+|++.+ |+.||||+++.+.. . .+
T Consensus 121 ~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~ 199 (537)
T PRK04750 121 DFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHD 199 (537)
T ss_pred hcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHH
Confidence 4666 789999999999999876 99999999964310 0 01
Q ss_pred --HHHHHHHHHhhcC----CCCcccceeEEEecCCcEEEEEeeCCCCChhhh--hhccCCCCCcCCCCCHHHHHHHHHHH
Q 004248 575 --AYLLELDFFSKVS----HARLVPLLGHCMERENEKFLVYKYMPNGDLSSS--LYRKTNTEDDLQSLDWITRLKIAIGA 646 (766)
Q Consensus 575 --~~~~E~~~l~~l~----H~niv~l~~~~~~~~~~~~lV~Ey~~~GsL~~~--l~~~~~~~~~~~~l~~~~~~~i~~~i 646 (766)
+|.+|+..+.+++ +.+.|.+-.++++-..+.++||||++|+.+.++ +...+. +...+.......++.|+
T Consensus 200 ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~---d~~~la~~~v~~~~~Qi 276 (537)
T PRK04750 200 ELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGT---DMKLLAERGVEVFFTQV 276 (537)
T ss_pred hhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCC---CHHHHHHHHHHHHHHHH
Confidence 2455665555553 444444444444333467899999999999874 222110 00112233333344444
Q ss_pred HHHhhhhccCCCCCeEecCCCCCCeeeCCCC----cEEeccchhhhhcC
Q 004248 647 AEGLSYLHHECTLPFVHRDVQASSILLDDKF----EVRLGSLSEVCAQG 691 (766)
Q Consensus 647 a~gL~yLH~~~~~~iiHrDlKp~NILl~~~~----~~kl~DFG~a~~~~ 691 (766)
. .+ +++|+|+||.||+++.++ ++++.|||++...+
T Consensus 277 f-------~~---GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~ 315 (537)
T PRK04750 277 F-------RD---GFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLN 315 (537)
T ss_pred H-------hC---CeeeCCCChHHeEEecCCCCCCeEEEEecceEEECC
Confidence 3 33 899999999999999988 99999999987653
No 460
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.35 E-value=2.5e-14 Score=153.73 Aligned_cols=177 Identities=37% Similarity=0.540 Sum_probs=148.0
Q ss_pred CCCCCEEEccCCCCCccCCcccCCCCCCcEEEeecCcCCCCCCccccCCCCCCEEEccCCCCCCCCCcccCCCCCCCEEe
Q 004248 141 LPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPSSLGQLSVLSVLDLSRNSLTGNIPTSFGLLKNLSSLD 220 (766)
Q Consensus 141 l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 220 (766)
+..-...||+.|++. .+|..+..+..|+.|.|..|.+. .+|..+++|..|++|||+.|+++ .+|..+..|+ |+.|-
T Consensus 74 ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli 149 (722)
T KOG0532|consen 74 LTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLI 149 (722)
T ss_pred ccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEE
Confidence 556677899999997 67888888889999999999987 78999999999999999999997 6888888876 89999
Q ss_pred ccCCcCCCCCCCCCCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccCCCCCCCEEEccCccCcc
Q 004248 221 ISSNYLTGSIPPGLGTLSKLQYLNVSNNSLASSIPAQLGDLDSLVDLDLSMNSLSGSVPSELRGLRSLQKFVIGNNFLSG 300 (766)
Q Consensus 221 Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g 300 (766)
+++|+++ .+|+.++.+..|..||.+.|.+. .+|..++.+.+|+.|.+..|++. .+|..+..| .|..||+|+|+++
T Consensus 150 ~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~~L-pLi~lDfScNkis- 224 (722)
T KOG0532|consen 150 VSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELCSL-PLIRLDFSCNKIS- 224 (722)
T ss_pred EecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHhCC-ceeeeecccCcee-
Confidence 9999987 78888998889999999999986 67888999999999999999987 567777755 4788888888886
Q ss_pred ccCCCccCCCCcccEEEccCCCCCCCC
Q 004248 301 NLSVNLFPTVSQLQIIVLRQNGFTGPP 327 (766)
Q Consensus 301 ~~~~~~~~~l~~L~~L~L~~N~l~~~~ 327 (766)
.||.. |..++.|++|.|.+|.++..+
T Consensus 225 ~iPv~-fr~m~~Lq~l~LenNPLqSPP 250 (722)
T KOG0532|consen 225 YLPVD-FRKMRHLQVLQLENNPLQSPP 250 (722)
T ss_pred ecchh-hhhhhhheeeeeccCCCCCCh
Confidence 56655 477788888888888776543
No 461
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.33 E-value=5.3e-12 Score=122.67 Aligned_cols=132 Identities=16% Similarity=0.075 Sum_probs=98.0
Q ss_pred cceeecCCcceEEEEEEcCCcEEEEEEeeccccCHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEeeCCCCChh
Q 004248 539 ANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLS 618 (766)
Q Consensus 539 ~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey~~~GsL~ 618 (766)
.+.++.|.++.||++... +..|++|...........+.+|+++++.+.+.++++-+-.+.. ...++||||++|.++.
T Consensus 3 ~~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~~~~~~P~~~~~~~--~~~~lv~e~i~G~~l~ 79 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTELLINRENEAENSKLAAEAGIGPKLYYFDP--ETGVLITEFIEGSELL 79 (170)
T ss_pred eeecCCcccCceEEEEEC-CeEEEEEeCCCCcccccCHHHHHHHHHHHHHhCCCCceEEEeC--CCCeEEEEecCCCccc
Confidence 467899999999999865 6789999875443233457889999999977666654322322 3458999999998775
Q ss_pred hhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCC--CCCeEecCCCCCCeeeCCCCcEEeccchhhhh
Q 004248 619 SSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHEC--TLPFVHRDVQASSILLDDKFEVRLGSLSEVCA 689 (766)
Q Consensus 619 ~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~--~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~ 689 (766)
+.- . ....++.+++++|+.||+.. ...++|+|+||.||+++ ++.+++.|||.+..
T Consensus 80 ~~~------------~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 80 TED------------F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred ccc------------c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 430 0 11245678999999999862 22369999999999999 67899999998753
No 462
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.30 E-value=2.1e-12 Score=143.55 Aligned_cols=198 Identities=36% Similarity=0.503 Sum_probs=131.1
Q ss_pred EEEccCCCCCccCCcccCCCCCCcEEEeecCcCCCCCCccccCCC-CCCEEEccCCCCCCCCCcccCCCCCCCEEeccCC
Q 004248 146 ALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPSSLGQLS-VLSVLDLSRNSLTGNIPTSFGLLKNLSSLDISSN 224 (766)
Q Consensus 146 ~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 224 (766)
.|+++.|.+...+ ..+..++.++.|++.+|.++ .+|.....+. +|+.|++++|++. .+|..+..+++|+.|++++|
T Consensus 97 ~l~~~~~~~~~~~-~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N 173 (394)
T COG4886 97 SLDLNLNRLRSNI-SELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFN 173 (394)
T ss_pred eeeccccccccCc-hhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCc
Confidence 4666666663322 23445567777777777776 5666666664 7777777777776 45566677777777777777
Q ss_pred cCCCCCCCCCCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccCCCCCCCEEEccCccCccccCC
Q 004248 225 YLTGSIPPGLGTLSKLQYLNVSNNSLASSIPAQLGDLDSLVDLDLSMNSLSGSVPSELRGLRSLQKFVIGNNFLSGNLSV 304 (766)
Q Consensus 225 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~~~~ 304 (766)
+++ .+|...+.+++|+.|++++|+++ .+|..++.+..|++|.+++|++. .++..+.++.++..+.+.+|++... +
T Consensus 174 ~l~-~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~~~-~- 248 (394)
T COG4886 174 DLS-DLPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLEDL-P- 248 (394)
T ss_pred hhh-hhhhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceeeec-c-
Confidence 776 55655556777777777777775 45555555556777777777533 4555666777777777777766431 1
Q ss_pred CccCCCCcccEEEccCCCCCCCCCcccCCCCCCCEEEccCCCCCCCCCc
Q 004248 305 NLFPTVSQLQIIVLRQNGFTGPPPDVLWSMPQLRLLDISRNNFTGPLPN 353 (766)
Q Consensus 305 ~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~ 353 (766)
.....+++++.|++++|.++...+ +..+.+|+.||+++|.++..+|.
T Consensus 249 ~~~~~l~~l~~L~~s~n~i~~i~~--~~~~~~l~~L~~s~n~~~~~~~~ 295 (394)
T COG4886 249 ESIGNLSNLETLDLSNNQISSISS--LGSLTNLRELDLSGNSLSNALPL 295 (394)
T ss_pred chhccccccceecccccccccccc--ccccCccCEEeccCccccccchh
Confidence 223566667777777777765544 67777788888888877766654
No 463
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.29 E-value=3.1e-12 Score=142.21 Aligned_cols=201 Identities=34% Similarity=0.525 Sum_probs=165.1
Q ss_pred EEecCCCCCCCCCchhhhhCCCCCCEEEccCCCCCccCCcccCCCC-CCcEEEeecCcCCCCCCccccCCCCCCEEEccC
Q 004248 121 SFNASRFLLPGSIPDWLGQQLPTLQALDLRSCSISGVIPFSLGNLT-NLTSLYLSDNGLTGTIPSSLGQLSVLSVLDLSR 199 (766)
Q Consensus 121 ~L~ls~n~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~-~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~ 199 (766)
.++++.|.+...+.... .++.++.|++.+|.++ .+|.....+. +|+.|++++|.+. .+|..+.++++|+.|++++
T Consensus 97 ~l~~~~~~~~~~~~~~~--~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~ 172 (394)
T COG4886 97 SLDLNLNRLRSNISELL--ELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSF 172 (394)
T ss_pred eeeccccccccCchhhh--cccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCC
Confidence 57777777644444332 3678999999999998 5666677775 9999999999998 6777889999999999999
Q ss_pred CCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCCCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCccCC
Q 004248 200 NSLTGNIPTSFGLLKNLSSLDISSNYLTGSIPPGLGTLSKLQYLNVSNNSLASSIPAQLGDLDSLVDLDLSMNSLSGSVP 279 (766)
Q Consensus 200 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p 279 (766)
|+++ .+|...+.+++|+.|++++|+++ .+|..+..+..|++|.+++|.+. .++..+.++.++..|.+.+|++. .++
T Consensus 173 N~l~-~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~-~~~ 248 (394)
T COG4886 173 NDLS-DLPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLE-DLP 248 (394)
T ss_pred chhh-hhhhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceee-ecc
Confidence 9998 57777668999999999999998 67877777778999999999643 46677889999999999999986 347
Q ss_pred cccCCCCCCCEEEccCccCccccCCCccCCCCcccEEEccCCCCCCCCCcccC
Q 004248 280 SELRGLRSLQKFVIGNNFLSGNLSVNLFPTVSQLQIIVLRQNGFTGPPPDVLW 332 (766)
Q Consensus 280 ~~l~~l~~L~~L~ls~N~l~g~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~ 332 (766)
..++.+++++.|++++|.++. ++. +..+.+|+.|++++|.++..+|....
T Consensus 249 ~~~~~l~~l~~L~~s~n~i~~-i~~--~~~~~~l~~L~~s~n~~~~~~~~~~~ 298 (394)
T COG4886 249 ESIGNLSNLETLDLSNNQISS-ISS--LGSLTNLRELDLSGNSLSNALPLIAL 298 (394)
T ss_pred chhccccccceeccccccccc-ccc--ccccCccCEEeccCccccccchhhhc
Confidence 788899999999999999984 333 57889999999999999988776543
No 464
>PLN03150 hypothetical protein; Provisional
Probab=99.28 E-value=4.8e-12 Score=147.62 Aligned_cols=113 Identities=38% Similarity=0.617 Sum_probs=104.8
Q ss_pred CCcEEEeecCcCCCCCCccccCCCCCCEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCCCCCCCccEEEcc
Q 004248 167 NLTSLYLSDNGLTGTIPSSLGQLSVLSVLDLSRNSLTGNIPTSFGLLKNLSSLDISSNYLTGSIPPGLGTLSKLQYLNVS 246 (766)
Q Consensus 167 ~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls 246 (766)
.++.|+|++|.++|.+|..++++++|+.|+|++|+++|.+|..++.+++|+.|+|++|+++|.+|..++++++|++|+|+
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccccCCC-CCCCEEEccCCcCCccCC
Q 004248 247 NNSLASSIPAQLGDL-DSLVDLDLSMNSLSGSVP 279 (766)
Q Consensus 247 ~N~l~~~~p~~l~~l-~~L~~L~Ls~N~l~g~~p 279 (766)
+|+++|.+|..++.+ .++..+++.+|......|
T Consensus 499 ~N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~p 532 (623)
T PLN03150 499 GNSLSGRVPAALGGRLLHRASFNFTDNAGLCGIP 532 (623)
T ss_pred CCcccccCChHHhhccccCceEEecCCccccCCC
Confidence 999999999998764 577899999997654433
No 465
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.18 E-value=1.5e-10 Score=117.63 Aligned_cols=143 Identities=18% Similarity=0.199 Sum_probs=110.1
Q ss_pred cceeecCCcceEEEEEEcCCcEEEEEEeecccc--CHHHHHHHHHHHhhcCCCC--cccceeEEEecC--CcEEEEEeeC
Q 004248 539 ANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSV--KTEAYLLELDFFSKVSHAR--LVPLLGHCMERE--NEKFLVYKYM 612 (766)
Q Consensus 539 ~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~--~~~~~~~E~~~l~~l~H~n--iv~l~~~~~~~~--~~~~lV~Ey~ 612 (766)
.+.++.|.++.||++...+|+.+++|....... ...++.+|+++++.+++.+ +.+++.+..... +..++||||+
T Consensus 3 ~~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i 82 (223)
T cd05154 3 VRQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERV 82 (223)
T ss_pred ceecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEe
Confidence 467899999999999987778999999765433 2457899999999997644 566666543321 2568999999
Q ss_pred CCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCC-----------------------------------
Q 004248 613 PNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHEC----------------------------------- 657 (766)
Q Consensus 613 ~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~----------------------------------- 657 (766)
+|+++.+.+.. ..++..++..++.+++++|.+||+..
T Consensus 83 ~G~~l~~~~~~--------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (223)
T cd05154 83 DGRVLRDRLLR--------PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEP 154 (223)
T ss_pred CCEecCCCCCC--------CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhccccc
Confidence 99888776531 13678888888999999999998521
Q ss_pred ------------------CCCeEecCCCCCCeeeCC--CCcEEeccchhhhh
Q 004248 658 ------------------TLPFVHRDVQASSILLDD--KFEVRLGSLSEVCA 689 (766)
Q Consensus 658 ------------------~~~iiHrDlKp~NILl~~--~~~~kl~DFG~a~~ 689 (766)
...++|+|++|.||+++. ++.+.|.||+.+..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 155 PAMERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 235799999999999998 66789999998753
No 466
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.12 E-value=4.1e-10 Score=110.71 Aligned_cols=134 Identities=12% Similarity=0.100 Sum_probs=96.0
Q ss_pred ceeecCCcceEEEEEEcC-------CcEEEEEEeecccc----------------------C-HHHH----HHHHHHHhh
Q 004248 540 NLIKNGHSGDLFRGILEG-------GIPVVIKRIDLQSV----------------------K-TEAY----LLELDFFSK 585 (766)
Q Consensus 540 ~~ig~G~~g~Vy~~~~~~-------g~~vavK~l~~~~~----------------------~-~~~~----~~E~~~l~~ 585 (766)
..||.|.-+.||.|...+ +..+|||..+.... . .+.+ .+|.+.|.+
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999998543 57999998743110 0 1123 379999999
Q ss_pred cCC--CCcccceeEEEecCCcEEEEEeeCCCCChhh-hhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhh-ccCCCCCe
Q 004248 586 VSH--ARLVPLLGHCMERENEKFLVYKYMPNGDLSS-SLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYL-HHECTLPF 661 (766)
Q Consensus 586 l~H--~niv~l~~~~~~~~~~~~lV~Ey~~~GsL~~-~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yL-H~~~~~~i 661 (766)
+.. -++-+.+++ ...++||||+.++.+.. .+.. ..++..+...+..+++.+|.+| |+. +|
T Consensus 83 l~~~Gv~vP~pi~~-----~~~~lvME~Ig~~~~~~~~Lkd--------~~~~~~~~~~i~~~i~~~l~~l~H~~---gl 146 (197)
T cd05146 83 MQKAGIPCPEVVVL-----KKHVLVMSFIGDDQVPAPKLKD--------AKLNDEEMKNAYYQVLSMMKQLYKEC---NL 146 (197)
T ss_pred HHHcCCCCCeEEEe-----cCCEEEEEEcCCCCccchhhhc--------cccCHHHHHHHHHHHHHHHHHHHHhC---Ce
Confidence 853 455555542 24589999998754432 2221 1244556677889999999999 665 99
Q ss_pred EecCCCCCCeeeCCCCcEEeccchhhhhc
Q 004248 662 VHRDVQASSILLDDKFEVRLGSLSEVCAQ 690 (766)
Q Consensus 662 iHrDlKp~NILl~~~~~~kl~DFG~a~~~ 690 (766)
||+|+++.||+++ ++.+.|+|||-+...
T Consensus 147 VHGDLs~~NIL~~-~~~v~iIDF~qav~~ 174 (197)
T cd05146 147 VHADLSEYNMLWH-DGKVWFIDVSQSVEP 174 (197)
T ss_pred ecCCCCHHHEEEE-CCcEEEEECCCceeC
Confidence 9999999999997 468999999987544
No 467
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.07 E-value=8.7e-11 Score=129.29 Aligned_cols=195 Identities=21% Similarity=0.181 Sum_probs=144.9
Q ss_pred HHHhCCCCccceeecCCcceEEEEEE--cCCcEEEEEEeeccccC---HHHHHHHHHHHhhc-CCCCcccceeEEEecCC
Q 004248 530 LAATGDFSDANLIKNGHSGDLFRGIL--EGGIPVVIKRIDLQSVK---TEAYLLELDFFSKV-SHARLVPLLGHCMEREN 603 (766)
Q Consensus 530 ~~~~~~~~~~~~ig~G~~g~Vy~~~~--~~g~~vavK~l~~~~~~---~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~ 603 (766)
...+.+|..+..||.|.|+.||+... .++..+++|.+...... ...-..|+-+...+ .|.++++.+..+.+ ..
T Consensus 261 s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~-~r 339 (524)
T KOG0601|consen 261 SCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQ-LR 339 (524)
T ss_pred eeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccc-cc
Confidence 34566899999999999999999873 56889999988654332 22224566666666 58888887775655 34
Q ss_pred cEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCC-CcEEec
Q 004248 604 EKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDK-FEVRLG 682 (766)
Q Consensus 604 ~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~-~~~kl~ 682 (766)
..|+=-|||+++++...+.-. ..++...++++..|++.++.++|+. .++|+|+||+||++..+ +.-+++
T Consensus 340 ~~~ip~e~~~~~s~~l~~~~~-------~~~d~~~~~~~~~q~~~~l~~i~s~---~~~~~d~~psni~i~~~~~~~~~~ 409 (524)
T KOG0601|consen 340 QGYIPLEFCEGGSSSLRSVTS-------QMLDEDPRLRLTAQILTALNVIHSK---LFVHLDVKPSNILISNDGFFSKLG 409 (524)
T ss_pred cccCchhhhcCcchhhhhHHH-------HhcCcchhhhhHHHHHhccccccch---hhhcccccccceeeccchhhhhcc
Confidence 678999999999987665221 3478888899999999999999986 99999999999999886 888999
Q ss_pred cchhhhhcCCCC-ccceeeecc-cCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCC
Q 004248 683 SLSEVCAQGGDA-HQSRITRLL-RLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNH 744 (766)
Q Consensus 683 DFG~a~~~~~~~-~~~~~t~~y-~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~ 744 (766)
|||.+....-.. ....+.+.| .++...+... +-.+.|++|||.-+.|.++|.+
T Consensus 410 ~~~~~t~~~~~~~~~~~~~r~~p~~~~~~e~~~---------~~~~~~~~sl~~~~~e~~~~~~ 464 (524)
T KOG0601|consen 410 DFGCWTRLAFSSGVFHHIDRLYPIAEILLEDYP---------HLSKADIFSLGLSVDEAITGSP 464 (524)
T ss_pred ccccccccceecccccccccccccchhhccccc---------cccccccccccccccccccCcc
Confidence 999986432111 112234555 3444444333 3578999999999999999874
No 468
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.06 E-value=1.5e-10 Score=117.53 Aligned_cols=151 Identities=18% Similarity=0.263 Sum_probs=110.2
Q ss_pred HHhhcCCCCcccceeEEEecC----CcEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCC
Q 004248 582 FFSKVSHARLVPLLGHCMERE----NEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHEC 657 (766)
Q Consensus 582 ~l~~l~H~niv~l~~~~~~~~----~~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~ 657 (766)
-+-.+.|.|||+++.|+.+.. .+..++.|||+.|++.++|++.+. ....+....-.+++.||..||.|||+ |
T Consensus 120 nllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~---~~~a~~~~~wkkw~tqIlsal~yLhs-~ 195 (458)
T KOG1266|consen 120 NLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKK---NQKALFQKAWKKWCTQILSALSYLHS-C 195 (458)
T ss_pred HHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHH---hhhhhhHHHHHHHHHHHHhhhhhhhc-c
Confidence 445567999999999775421 257899999999999999986543 22346777778899999999999998 7
Q ss_pred CCCeEecCCCCCCeeeCCCCcEEeccchhh------hhc-CCCCccceeeecccCCCCCCCCceeeeeeeeeccccccee
Q 004248 658 TLPFVHRDVQASSILLDDKFEVRLGSLSEV------CAQ-GGDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIY 730 (766)
Q Consensus 658 ~~~iiHrDlKp~NILl~~~~~~kl~DFG~a------~~~-~~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~ 730 (766)
.|+|+|+++..+-|.+..+|-+|++--.-. +.. ........+-+.|.+||.-... . .+..+|||
T Consensus 196 ~PpiihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~t--n-------~~~a~dIy 266 (458)
T KOG1266|consen 196 DPPIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTT--N-------TTGASDIY 266 (458)
T ss_pred CCccccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCccc--c-------cccchhhh
Confidence 899999999999999999999998531110 000 0111122344567777642211 1 46789999
Q ss_pred cchHHHHHHhcCCCC
Q 004248 731 FHGNPLFSAIFNNHL 745 (766)
Q Consensus 731 s~Gvvl~elltG~~p 745 (766)
+||...+||..|..-
T Consensus 267 ~fgmcAlemailEiq 281 (458)
T KOG1266|consen 267 KFGMCALEMAILEIQ 281 (458)
T ss_pred hhhHHHHHHHHheec
Confidence 999999999998754
No 469
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.03 E-value=9.9e-10 Score=122.00 Aligned_cols=163 Identities=18% Similarity=0.198 Sum_probs=117.9
Q ss_pred EEcCCcEEEEEEeeccccC-HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEeeCCCCChhhhhhccCCCCCcCC
Q 004248 554 ILEGGIPVVIKRIDLQSVK-TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQ 632 (766)
Q Consensus 554 ~~~~g~~vavK~l~~~~~~-~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~ 632 (766)
+..++.+|.|...+..... .+...+-++.|+.+|||||+++++. ++.++..|+|+|-+. -|..++.+
T Consensus 33 ~k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t-~e~~~~~ylvTErV~--Pl~~~lk~--------- 100 (690)
T KOG1243|consen 33 RKADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDT-TEEEGTLYLVTERVR--PLETVLKE--------- 100 (690)
T ss_pred eeccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhh-hcccCceEEEeeccc--cHHHHHHH---------
Confidence 3667889999988655442 3456778899999999999999984 444678999999885 57777754
Q ss_pred CCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcCCCC---ccceeeecccCCCCC
Q 004248 633 SLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDA---HQSRITRLLRLPQSS 709 (766)
Q Consensus 633 ~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~~~~---~~~~~t~~y~aPe~~ 709 (766)
+......-.+.||+.||.|||++| +++|++|--.-|++++.|+.||++|-++....+.. .....-.-|..|+.+
T Consensus 101 -l~~~~v~~Gl~qIl~AL~FL~~d~--~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~~~~~~~~~s~~~P~~~ 177 (690)
T KOG1243|consen 101 -LGKEEVCLGLFQILAALSFLNDDC--NLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAPAKSLYLIESFDDPEEI 177 (690)
T ss_pred -hHHHHHHHHHHHHHHHHHHHhccC--CeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCcccccchhhhcccChhhc
Confidence 233444556789999999999875 89999999999999999999999998775432111 110001112333322
Q ss_pred CCCceeeeeeeeecccccceecchHHHHHHhcC
Q 004248 710 EQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFN 742 (766)
Q Consensus 710 ~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG 742 (766)
.... -..|.|-|||+++|++.|
T Consensus 178 ~~s~-----------~s~D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 178 DPSE-----------WSIDSWGLGCLIEELFNG 199 (690)
T ss_pred Cccc-----------cchhhhhHHHHHHHHhCc
Confidence 2111 235999999999999999
No 470
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.01 E-value=4.5e-11 Score=125.54 Aligned_cols=190 Identities=25% Similarity=0.247 Sum_probs=86.3
Q ss_pred CCCCCCEEEccCCCCCccC--CcccCCCCCCcEEEeecCcCCCCCCccc-cCCCCCCEEEccCCCCCCC-CCcccCCCCC
Q 004248 140 QLPTLQALDLRSCSISGVI--PFSLGNLTNLTSLYLSDNGLTGTIPSSL-GQLSVLSVLDLSRNSLTGN-IPTSFGLLKN 215 (766)
Q Consensus 140 ~l~~L~~L~Ls~N~l~g~~--p~~l~~l~~L~~L~Ls~N~l~~~~p~~l-~~L~~L~~L~Ls~N~l~~~-~p~~~~~l~~ 215 (766)
.|++++.||||.|-|.... -.....|++|+.|+|+.|++.-...+.. ..+++|+.|.|+.|.++-. +-.....+++
T Consensus 144 ~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~~lK~L~l~~CGls~k~V~~~~~~fPs 223 (505)
T KOG3207|consen 144 ILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLSHLKQLVLNSCGLSWKDVQWILLTFPS 223 (505)
T ss_pred hCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhhhhheEEeccCCCCHHHHHHHHHhCCc
Confidence 3566666666666554321 1223455566666666665542221111 1344555555555555421 1112233455
Q ss_pred CCEEeccCCcCCCCCCCCCCCCCCccEEEccCCCCCCCC-ccccCCCCCCCEEEccCCcCCcc-CCcccCCCCCCCEEEc
Q 004248 216 LSSLDISSNYLTGSIPPGLGTLSKLQYLNVSNNSLASSI-PAQLGDLDSLVDLDLSMNSLSGS-VPSELRGLRSLQKFVI 293 (766)
Q Consensus 216 L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~-p~~l~~l~~L~~L~Ls~N~l~g~-~p~~l~~l~~L~~L~l 293 (766)
|+.|+|..|...+.-......+..|+.|||++|++-... -...+.++.|+.|+++.+.+... .|+. .
T Consensus 224 l~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~~Lnls~tgi~si~~~d~-~---------- 292 (505)
T KOG3207|consen 224 LEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLNQLNLSSTGIASIAEPDV-E---------- 292 (505)
T ss_pred HHHhhhhcccccceecchhhhhhHHhhccccCCcccccccccccccccchhhhhccccCcchhcCCCc-c----------
Confidence 555555555322122222233445555555555543211 02234455555555555544321 1111 0
Q ss_pred cCccCccccCCCccCCCCcccEEEccCCCCCCCC-CcccCCCCCCCEEEccCCCCCC
Q 004248 294 GNNFLSGNLSVNLFPTVSQLQIIVLRQNGFTGPP-PDVLWSMPQLRLLDISRNNFTG 349 (766)
Q Consensus 294 s~N~l~g~~~~~~~~~l~~L~~L~L~~N~l~~~~-p~~l~~l~~L~~L~Ls~N~l~g 349 (766)
.........+|+.|+++.|++.... -..+..+++|+.|....|.|+-
T Consensus 293 ---------s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~~~~n~ln~ 340 (505)
T KOG3207|consen 293 ---------SLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLENLKHLRITLNYLNK 340 (505)
T ss_pred ---------chhhhcccccceeeecccCccccccccchhhccchhhhhhcccccccc
Confidence 0000123345666666666653211 1234456777888888888763
No 471
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.01 E-value=6.1e-11 Score=124.56 Aligned_cols=186 Identities=30% Similarity=0.348 Sum_probs=132.0
Q ss_pred hccCCCCCEEecCCCCCCCCCc-hhhhhCCCCCCEEEccCCCCCccCCccc-CCCCCCcEEEeecCcCCCC-CCccccCC
Q 004248 113 LVNLTHLASFNASRFLLPGSIP-DWLGQQLPTLQALDLRSCSISGVIPFSL-GNLTNLTSLYLSDNGLTGT-IPSSLGQL 189 (766)
Q Consensus 113 l~~l~~L~~L~ls~n~l~g~ip-~~~~~~l~~L~~L~Ls~N~l~g~~p~~l-~~l~~L~~L~Ls~N~l~~~-~p~~l~~L 189 (766)
...+++++.||||+|.|..--| -.+..+|++|+.|+|+.|.+.-...... ..+++|+.|.|+.|.|+-. +-..+..+
T Consensus 142 ~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~~lK~L~l~~CGls~k~V~~~~~~f 221 (505)
T KOG3207|consen 142 SKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLSHLKQLVLNSCGLSWKDVQWILLTF 221 (505)
T ss_pred hhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhhhhheEEeccCCCCHHHHHHHHHhC
Confidence 4578999999999998764322 2344569999999999999875444332 3578999999999999832 23345678
Q ss_pred CCCCEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCC--CCCCCCCCccEEEccCCCCCCC-Cccc-----cCCC
Q 004248 190 SVLSVLDLSRNSLTGNIPTSFGLLKNLSSLDISSNYLTGSIP--PGLGTLSKLQYLNVSNNSLASS-IPAQ-----LGDL 261 (766)
Q Consensus 190 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p--~~l~~l~~L~~L~Ls~N~l~~~-~p~~-----l~~l 261 (766)
++|+.|+|..|...+.-......+..|+.|||++|++- ..+ ...+.++.|+.|+++.+.+... .|+. ...+
T Consensus 222 Psl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li-~~~~~~~~~~l~~L~~Lnls~tgi~si~~~d~~s~~kt~~f 300 (505)
T KOG3207|consen 222 PSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLI-DFDQGYKVGTLPGLNQLNLSSTGIASIAEPDVESLDKTHTF 300 (505)
T ss_pred CcHHHhhhhcccccceecchhhhhhHHhhccccCCccc-ccccccccccccchhhhhccccCcchhcCCCccchhhhccc
Confidence 89999999999644444445667889999999999987 344 4578899999999999988753 2332 3456
Q ss_pred CCCCEEEccCCcCCcc-CCcccCCCCCCCEEEccCccCc
Q 004248 262 DSLVDLDLSMNSLSGS-VPSELRGLRSLQKFVIGNNFLS 299 (766)
Q Consensus 262 ~~L~~L~Ls~N~l~g~-~p~~l~~l~~L~~L~ls~N~l~ 299 (766)
++|++|+++.|++..- .-..+..+++|+.|.+..|.++
T Consensus 301 ~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~~~~n~ln 339 (505)
T KOG3207|consen 301 PKLEYLNISENNIRDWRSLNHLRTLENLKHLRITLNYLN 339 (505)
T ss_pred ccceeeecccCccccccccchhhccchhhhhhccccccc
Confidence 7888888888887421 1122334455555555555554
No 472
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=98.98 E-value=8.4e-11 Score=117.52 Aligned_cols=201 Identities=22% Similarity=0.261 Sum_probs=122.6
Q ss_pred CCCCCEEEccCCCCCccCCcccCCCCCCcEEEeecCcCCCCCCccccCCCCCCEEEcc-CCCCCCCCCcccCCCCCCCEE
Q 004248 141 LPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPSSLGQLSVLSVLDLS-RNSLTGNIPTSFGLLKNLSSL 219 (766)
Q Consensus 141 l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls-~N~l~~~~p~~~~~l~~L~~L 219 (766)
+.+|..+.+|.+.-..+. .....-+.|+++...+..++ ..|.-+ -...+..+.-+ ..-.+|..-..+...+.|+.|
T Consensus 213 f~~l~~~~~s~~~~~~i~-~~~~~kptl~t~~v~~s~~~-~~~~l~-pe~~~~D~~~~E~~t~~G~~~~~~dTWq~Ltel 289 (490)
T KOG1259|consen 213 FRNLKTLKFSALSTENIV-DIELLKPTLQTICVHNTTIQ-DVPSLL-PETILADPSGSEPSTSNGSALVSADTWQELTEL 289 (490)
T ss_pred hhhhheeeeeccchhhee-ceeecCchhheeeeeccccc-cccccc-chhhhcCccCCCCCccCCceEEecchHhhhhhc
Confidence 456666666666532211 11122355666666655443 122111 11111111111 112234444445556677788
Q ss_pred eccCCcCCCCCCCCCCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccCCCCCCCEEEccCccCc
Q 004248 220 DISSNYLTGSIPPGLGTLSKLQYLNVSNNSLASSIPAQLGDLDSLVDLDLSMNSLSGSVPSELRGLRSLQKFVIGNNFLS 299 (766)
Q Consensus 220 ~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~ 299 (766)
|||+|.++ .+.++..-+++++.|++|+|.+... ..+..+++|+.||||+|.++ .+..+-..+.+++.|.|+.|.+.
T Consensus 290 DLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~v--~nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL~La~N~iE 365 (490)
T KOG1259|consen 290 DLSGNLIT-QIDESVKLAPKLRRLILSQNRIRTV--QNLAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKTLKLAQNKIE 365 (490)
T ss_pred cccccchh-hhhhhhhhccceeEEeccccceeee--hhhhhcccceEeecccchhH-hhhhhHhhhcCEeeeehhhhhHh
Confidence 88888777 5666666777888888888877632 23667778888888888776 34445556777888888888764
Q ss_pred cccCCCccCCCCcccEEEccCCCCCCCC-CcccCCCCCCCEEEccCCCCCCCC
Q 004248 300 GNLSVNLFPTVSQLQIIVLRQNGFTGPP-PDVLWSMPQLRLLDISRNNFTGPL 351 (766)
Q Consensus 300 g~~~~~~~~~l~~L~~L~L~~N~l~~~~-p~~l~~l~~L~~L~Ls~N~l~g~~ 351 (766)
. ++ -...+.+|..||+++|++...- -..++++|.|++|.|.+|.+.+..
T Consensus 366 ~-LS--GL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~v 415 (490)
T KOG1259|consen 366 T-LS--GLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGSV 415 (490)
T ss_pred h-hh--hhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccccc
Confidence 2 11 1356678888999999886432 245889999999999999998643
No 473
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=98.97 E-value=8.4e-11 Score=117.55 Aligned_cols=207 Identities=21% Similarity=0.208 Sum_probs=135.7
Q ss_pred CCcccCCCCCCcEEEeecCcCCCCCCccccCCCCCCEEEccCCCCCCCCCcccCCCCCCCEEeccC---CcCCCCCCCCC
Q 004248 158 IPFSLGNLTNLTSLYLSDNGLTGTIPSSLGQLSVLSVLDLSRNSLTGNIPTSFGLLKNLSSLDISS---NYLTGSIPPGL 234 (766)
Q Consensus 158 ~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~---N~l~~~~p~~l 234 (766)
+|-.+.-+.+|+.+.+|.+.-. .+-+-...-+.|+++...+.-++ ..|. +--.+.+. |.+. .-.+|..-..+
T Consensus 206 l~f~l~~f~~l~~~~~s~~~~~-~i~~~~~~kptl~t~~v~~s~~~-~~~~-l~pe~~~~--D~~~~E~~t~~G~~~~~~ 280 (490)
T KOG1259|consen 206 LSFNLNAFRNLKTLKFSALSTE-NIVDIELLKPTLQTICVHNTTIQ-DVPS-LLPETILA--DPSGSEPSTSNGSALVSA 280 (490)
T ss_pred cccchHHhhhhheeeeeccchh-heeceeecCchhheeeeeccccc-cccc-ccchhhhc--CccCCCCCccCCceEEec
Confidence 3444555667777777776533 12222223356778777655443 1221 11112222 2221 12234443445
Q ss_pred CCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccCCCCCCCEEEccCccCccccCCCccCCCCccc
Q 004248 235 GTLSKLQYLNVSNNSLASSIPAQLGDLDSLVDLDLSMNSLSGSVPSELRGLRSLQKFVIGNNFLSGNLSVNLFPTVSQLQ 314 (766)
Q Consensus 235 ~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~~~~~~~~~l~~L~ 314 (766)
.....|+.||||+|.++ .+.++..-++.++.|++|+|.+.. + ..+..+++|+.||||+|.++... . +-..+-+++
T Consensus 281 dTWq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~-v-~nLa~L~~L~~LDLS~N~Ls~~~-G-wh~KLGNIK 355 (490)
T KOG1259|consen 281 DTWQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRT-V-QNLAELPQLQLLDLSGNLLAECV-G-WHLKLGNIK 355 (490)
T ss_pred chHhhhhhccccccchh-hhhhhhhhccceeEEeccccceee-e-hhhhhcccceEeecccchhHhhh-h-hHhhhcCEe
Confidence 55678999999999997 567778888999999999999973 3 34889999999999999987322 1 224677899
Q ss_pred EEEccCCCCCCCCCcccCCCCCCCEEEccCCCCCCCCCcccccCCCCCcEEEccCCcCccCC
Q 004248 315 IIVLRQNGFTGPPPDVLWSMPQLRLLDISRNNFTGPLPNSRSNVNTSTVELNISQNMFYGGL 376 (766)
Q Consensus 315 ~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~L~ls~N~l~g~~ 376 (766)
.|.|++|.+... +.++.+-+|..||+++|++...-.-...+.++-|..+.|-+|.+.+..
T Consensus 356 tL~La~N~iE~L--SGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~v 415 (490)
T KOG1259|consen 356 TLKLAQNKIETL--SGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGSV 415 (490)
T ss_pred eeehhhhhHhhh--hhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccccc
Confidence 999999988532 346677889999999999973222223455567788888999887643
No 474
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=98.95 E-value=1.6e-10 Score=133.34 Aligned_cols=199 Identities=17% Similarity=0.110 Sum_probs=140.1
Q ss_pred CCCCccceeecCCcceEEEEE-EcCCcEEEEEEeeccc----cCHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGI-LEGGIPVVIKRIDLQS----VKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLV 608 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~-~~~g~~vavK~l~~~~----~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV 608 (766)
+++...+-+-+|+++.++-+. ...|...++|...... ...++.+++-.+.-..+||-+++...- +......+||
T Consensus 804 d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s-~~~rsP~~L~ 882 (1205)
T KOG0606|consen 804 DGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPS-FPCRSPLPLV 882 (1205)
T ss_pred ccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCC-CCCCCCcchh
Confidence 456666788899999999887 3335444444432211 112334444444444566777765543 1224578999
Q ss_pred EeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhh
Q 004248 609 YKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVC 688 (766)
Q Consensus 609 ~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~ 688 (766)
++|..+|+|...++..+. .+.+....+...+.++++|||.. .++|||+||.|+++..++..+++|||...
T Consensus 883 ~~~~~~~~~~Skl~~~~~-------~saepaRs~i~~~vqs~e~L~s~---~r~h~~~~p~~~l~~~~gh~~l~~~~t~~ 952 (1205)
T KOG0606|consen 883 GHYLNGGDLPSKLHNSGC-------LSAEPARSPILERVQSLESLHSS---LRKHRDLKPDSLLIAYDGHRPLTDFGTLS 952 (1205)
T ss_pred hHHhccCCchhhhhcCCC-------cccccccchhHHHHhhhhccccc---hhhcccccccchhhcccCCcccCcccccc
Confidence 999999999999987653 33333445566778899999986 68999999999999999999999998433
Q ss_pred hcC------------------------------C----CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchH
Q 004248 689 AQG------------------------------G----DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGN 734 (766)
Q Consensus 689 ~~~------------------------------~----~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gv 734 (766)
..+ . ......+|+-|.+||...+..+|+ .+|+|+.|+
T Consensus 953 ~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs---------~ad~~~~g~ 1023 (1205)
T KOG0606|consen 953 KVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGS---------AADWWSSGV 1023 (1205)
T ss_pred ccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCC---------cchhhhhhh
Confidence 210 0 012245688899999888777654 669999999
Q ss_pred HHHHHhcCCCCCCCCccc
Q 004248 735 PLFSAIFNNHLNLSSRFG 752 (766)
Q Consensus 735 vl~elltG~~p~~~~~~~ 752 (766)
+++|.++|.+||......
T Consensus 1024 ~l~e~l~g~pp~na~tpq 1041 (1205)
T KOG0606|consen 1024 CLFEVLTGIPPFNAETPQ 1041 (1205)
T ss_pred hhhhhhcCCCCCCCcchh
Confidence 999999999999655443
No 475
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=98.92 E-value=4.2e-10 Score=108.51 Aligned_cols=109 Identities=32% Similarity=0.435 Sum_probs=29.8
Q ss_pred ccCCCCCCEEEccCCCCCCCCCcccC-CCCCCCEEeccCCcCCCCCCCCCCCCCCccEEEccCCCCCCCCcccc-CCCCC
Q 004248 186 LGQLSVLSVLDLSRNSLTGNIPTSFG-LLKNLSSLDISSNYLTGSIPPGLGTLSKLQYLNVSNNSLASSIPAQL-GDLDS 263 (766)
Q Consensus 186 l~~L~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l-~~l~~ 263 (766)
+.+..++++|+|++|.|+. + +.++ .+.+|+.|||++|.++. + +.+..+++|++|++++|+++. ++..+ ..+++
T Consensus 15 ~~n~~~~~~L~L~~n~I~~-I-e~L~~~l~~L~~L~Ls~N~I~~-l-~~l~~L~~L~~L~L~~N~I~~-i~~~l~~~lp~ 89 (175)
T PF14580_consen 15 YNNPVKLRELNLRGNQIST-I-ENLGATLDKLEVLDLSNNQITK-L-EGLPGLPRLKTLDLSNNRISS-ISEGLDKNLPN 89 (175)
T ss_dssp -----------------------S--TT-TT--EEE-TTS--S----TT----TT--EEE--SS---S--CHHHHHH-TT
T ss_pred ccccccccccccccccccc-c-cchhhhhcCCCEEECCCCCCcc-c-cCccChhhhhhcccCCCCCCc-cccchHHhCCc
Confidence 3445567777777777763 2 2444 46677777777777763 3 246667777777777777764 33233 24667
Q ss_pred CCEEEccCCcCCccC-CcccCCCCCCCEEEccCccCc
Q 004248 264 LVDLDLSMNSLSGSV-PSELRGLRSLQKFVIGNNFLS 299 (766)
Q Consensus 264 L~~L~Ls~N~l~g~~-p~~l~~l~~L~~L~ls~N~l~ 299 (766)
|++|+|++|++...- -..+..+++|+.|++.+|.++
T Consensus 90 L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~ 126 (175)
T PF14580_consen 90 LQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVC 126 (175)
T ss_dssp --EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGG
T ss_pred CCEEECcCCcCCChHHhHHHHcCCCcceeeccCCccc
Confidence 777777777765321 123344555555555555443
No 476
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.92 E-value=7.9e-09 Score=98.16 Aligned_cols=130 Identities=19% Similarity=0.228 Sum_probs=93.9
Q ss_pred ceeecCCcceEEEEEEcCCcEEEEEEe-ecccc--------CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEe
Q 004248 540 NLIKNGHSGDLFRGILEGGIPVVIKRI-DLQSV--------KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYK 610 (766)
Q Consensus 540 ~~ig~G~~g~Vy~~~~~~g~~vavK~l-~~~~~--------~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~E 610 (766)
..+++|+-+.+|.+.+.+ ..+++|.- ++.-. ..++..+|++++.+++---|-.-.=+.++ .+...++||
T Consensus 2 ~~i~~GAEa~i~~~~~~g-~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD-~~~~~I~me 79 (204)
T COG3642 2 DLIKQGAEAIIYLTDFLG-LPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVD-PDNGLIVME 79 (204)
T ss_pred chhhCCcceeEEeeeccC-cceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEc-CCCCEEEEE
Confidence 357899999999997643 34666643 22111 13567889999999864433222222333 456789999
Q ss_pred eCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhh
Q 004248 611 YMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCA 689 (766)
Q Consensus 611 y~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~ 689 (766)
|++|-.|.+.+... +..++..|-+-+.-||.. +|||+|+.++||.+..+. +.+.|||++..
T Consensus 80 ~I~G~~lkd~l~~~--------------~~~~~r~vG~~vg~lH~~---givHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 80 YIEGELLKDALEEA--------------RPDLLREVGRLVGKLHKA---GIVHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred EeCChhHHHHHHhc--------------chHHHHHHHHHHHHHHhc---CeecCCCccceEEEeCCc-EEEEECCcccc
Confidence 99998888888542 245666777777889998 999999999999998765 99999999864
No 477
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=98.92 E-value=3.2e-10 Score=109.28 Aligned_cols=101 Identities=34% Similarity=0.385 Sum_probs=28.9
Q ss_pred CCCCCEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCC-CCCCCccEEEccCCCCCCCC-ccccCCCCCCCE
Q 004248 189 LSVLSVLDLSRNSLTGNIPTSFGLLKNLSSLDISSNYLTGSIPPGL-GTLSKLQYLNVSNNSLASSI-PAQLGDLDSLVD 266 (766)
Q Consensus 189 L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l-~~l~~L~~L~Ls~N~l~~~~-p~~l~~l~~L~~ 266 (766)
+.+|+.|||++|.++. ++ .+..+++|+.|++++|+++. +++.+ ..+++|+.|+|++|++...- -..+..+++|++
T Consensus 41 l~~L~~L~Ls~N~I~~-l~-~l~~L~~L~~L~L~~N~I~~-i~~~l~~~lp~L~~L~L~~N~I~~l~~l~~L~~l~~L~~ 117 (175)
T PF14580_consen 41 LDKLEVLDLSNNQITK-LE-GLPGLPRLKTLDLSNNRISS-ISEGLDKNLPNLQELYLSNNKISDLNELEPLSSLPKLRV 117 (175)
T ss_dssp -TT--EEE-TTS--S---T-T----TT--EEE--SS---S--CHHHHHH-TT--EEE-TTS---SCCCCGGGGG-TT--E
T ss_pred hcCCCEEECCCCCCcc-cc-CccChhhhhhcccCCCCCCc-cccchHHhCCcCCEEECcCCcCCChHHhHHHHcCCCcce
Confidence 4444444444444442 21 23444444555555554442 22222 13444555555555443211 123445566666
Q ss_pred EEccCCcCCccCC---cccCCCCCCCEEE
Q 004248 267 LDLSMNSLSGSVP---SELRGLRSLQKFV 292 (766)
Q Consensus 267 L~Ls~N~l~g~~p---~~l~~l~~L~~L~ 292 (766)
|+|.+|.++..-- ..+..+++|+.||
T Consensus 118 L~L~~NPv~~~~~YR~~vi~~lP~Lk~LD 146 (175)
T PF14580_consen 118 LSLEGNPVCEKKNYRLFVIYKLPSLKVLD 146 (175)
T ss_dssp EE-TT-GGGGSTTHHHHHHHH-TT-SEET
T ss_pred eeccCCcccchhhHHHHHHHHcChhheeC
Confidence 6666666653210 1234455555554
No 478
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.89 E-value=1.9e-10 Score=128.42 Aligned_cols=242 Identities=28% Similarity=0.293 Sum_probs=144.4
Q ss_pred CCCCCEEEccCCCCCccCCcccCCCCCCcEEEeecCcCCCCCCccccCCCCCCEEEccCCCCCCCCCcccCCCCCCCEEe
Q 004248 141 LPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPSSLGQLSVLSVLDLSRNSLTGNIPTSFGLLKNLSSLD 220 (766)
Q Consensus 141 l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 220 (766)
+..++.+++..|.+.. +-..+..+++|+.|+|.+|++.. +...+..+++|++|+|++|+|+... .+..++.|+.|+
T Consensus 71 l~~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~~-i~~~l~~~~~L~~L~ls~N~I~~i~--~l~~l~~L~~L~ 146 (414)
T KOG0531|consen 71 LTSLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIEK-IENLLSSLVNLQVLDLSFNKITKLE--GLSTLTLLKELN 146 (414)
T ss_pred hHhHHhhccchhhhhh-hhcccccccceeeeeccccchhh-cccchhhhhcchheecccccccccc--chhhccchhhhe
Confidence 5566667777777763 23346677778888888887774 3333666777888888888877543 355666677888
Q ss_pred ccCCcCCCCCCCCCCCCCCccEEEccCCCCCCCCc-cccCCCCCCCEEEccCCcCCccCCcccCCCCCCCEEEccCccCc
Q 004248 221 ISSNYLTGSIPPGLGTLSKLQYLNVSNNSLASSIP-AQLGDLDSLVDLDLSMNSLSGSVPSELRGLRSLQKFVIGNNFLS 299 (766)
Q Consensus 221 Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p-~~l~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~ 299 (766)
+++|.++.. ..+..+++|+.+++++|.+...-+ . ...+.+|+.+++.+|.+.. ...+..+..+..+++..|.++
T Consensus 147 l~~N~i~~~--~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~--i~~~~~~~~l~~~~l~~n~i~ 221 (414)
T KOG0531|consen 147 LSGNLISDI--SGLESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIRE--IEGLDLLKKLVLLSLLDNKIS 221 (414)
T ss_pred eccCcchhc--cCCccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchhc--ccchHHHHHHHHhhcccccce
Confidence 888877632 345567778888888887765433 1 4566777777788777652 223334444555566777665
Q ss_pred cccCCCccCCCC--cccEEEccCCCCCCCCCcccCCCCCCCEEEccCCCCCCCCCcccccCCCCCcEEEccCCcCccCC-
Q 004248 300 GNLSVNLFPTVS--QLQIIVLRQNGFTGPPPDVLWSMPQLRLLDISRNNFTGPLPNSRSNVNTSTVELNISQNMFYGGL- 376 (766)
Q Consensus 300 g~~~~~~~~~l~--~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~L~ls~N~l~g~~- 376 (766)
-.-+. ..+. +|+.+++++|.+.... ..+..+..+..||+++|++...-. ......+..+..+.|.+....
T Consensus 222 ~~~~l---~~~~~~~L~~l~l~~n~i~~~~-~~~~~~~~l~~l~~~~n~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 294 (414)
T KOG0531|consen 222 KLEGL---NELVMLHLRELYLSGNRISRSP-EGLENLKNLPVLDLSSNRISNLEG---LERLPKLSELWLNDNKLALSEA 294 (414)
T ss_pred eccCc---ccchhHHHHHHhcccCcccccc-ccccccccccccchhhcccccccc---ccccchHHHhccCcchhcchhh
Confidence 22111 1122 2677788888776432 455667778888888887763221 122233444555555543210
Q ss_pred ------CcCCCCCCEEeccCCcCccccC
Q 004248 377 ------TPVLGRFRLVDLSGNYFEGRVP 398 (766)
Q Consensus 377 ------~~~l~~l~~ldLs~N~l~g~~p 398 (766)
-.....++.+.+..|......+
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (414)
T KOG0531|consen 295 ISQEYITSAAPTLVTLTLELNPIRKISS 322 (414)
T ss_pred hhccccccccccccccccccCccccccc
Confidence 1123445556666666554433
No 479
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=98.88 E-value=2.3e-09 Score=118.26 Aligned_cols=190 Identities=17% Similarity=0.137 Sum_probs=142.6
Q ss_pred CCccceeec--CCcceEEEEEE---cCCcEEEEEEeeccc---cCHHHHHHHHHHHhhcC-CCCcccceeEEEecCCcEE
Q 004248 536 FSDANLIKN--GHSGDLFRGIL---EGGIPVVIKRIDLQS---VKTEAYLLELDFFSKVS-HARLVPLLGHCMERENEKF 606 (766)
Q Consensus 536 ~~~~~~ig~--G~~g~Vy~~~~---~~g~~vavK~l~~~~---~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~~ 606 (766)
|.....+|. |.+|.||++.. .++..+|+|+-+..- ....+=.+|+..-.+++ |+|.|+.+..+.+ .+..+
T Consensus 116 ~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~-~~~lf 194 (524)
T KOG0601|consen 116 FPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEG-SGILF 194 (524)
T ss_pred cccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCccccc-CCcce
Confidence 556678999 99999999985 568899999843211 11233456777667774 9999997775544 56789
Q ss_pred EEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHH----HhhhhccCCCCCeEecCCCCCCeeeCCC-CcEEe
Q 004248 607 LVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAE----GLSYLHHECTLPFVHRDVQASSILLDDK-FEVRL 681 (766)
Q Consensus 607 lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~----gL~yLH~~~~~~iiHrDlKp~NILl~~~-~~~kl 681 (766)
+-+|++. .+|.++.+.... .++....+.+..+..+ |+.++|.. .|+|-|+||.||...++ ...++
T Consensus 195 iqtE~~~-~sl~~~~~~~~~------~~p~~~l~~~~~~~~~~~~~al~~~hs~---~~~~~~~kp~~i~~~~~~~s~~~ 264 (524)
T KOG0601|consen 195 IQTELCG-ESLQSYCHTPCN------FLPDNLLWNSLRDWLSRDVTALSHLHSN---NIVHDDLKPANIFTTSDWTSCKL 264 (524)
T ss_pred eeecccc-chhHHhhhcccc------cCCchhhhhHHhhhhhcccccccccCCC---cccccccchhheecccccceeec
Confidence 9999996 688888765322 2555666667777777 99999997 99999999999999998 88999
Q ss_pred ccchhhhhcCCCC-cc-------ceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCC
Q 004248 682 GSLSEVCAQGGDA-HQ-------SRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLN 746 (766)
Q Consensus 682 ~DFG~a~~~~~~~-~~-------~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~ 746 (766)
+|||+...+++.. .. ..+...|++||...+. ++.+.|+||+|.|.+|..+|-.+.
T Consensus 265 ~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l----------~~~~~di~sl~ev~l~~~l~~~~~ 327 (524)
T KOG0601|consen 265 TDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGL----------ATFASDIFSLGEVILEAILGSHLP 327 (524)
T ss_pred CCcceeEEccCCccccceeeeecCCCCceEeChhhhccc----------cchHhhhcchhhhhHhhHhhcccc
Confidence 9999988764321 11 1244568999987543 468899999999999999987665
No 480
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.85 E-value=2.3e-08 Score=94.43 Aligned_cols=142 Identities=15% Similarity=0.154 Sum_probs=99.4
Q ss_pred ccceeecCCcceEEEEEEcCCcEEEEEEe-ecccc--------CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEE
Q 004248 538 DANLIKNGHSGDLFRGILEGGIPVVIKRI-DLQSV--------KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLV 608 (766)
Q Consensus 538 ~~~~ig~G~~g~Vy~~~~~~g~~vavK~l-~~~~~--------~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV 608 (766)
...++-+|+-+.|+++..+ |+...||.- .+... .+++..+|++++.+++---|.--.-++.+ ...-.++
T Consensus 11 ~l~likQGAEArv~~~~~~-Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D-~~~~~i~ 88 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFS-GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFID-TYGGQIY 88 (229)
T ss_pred cceeeeccceeeEeeeccC-CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEe-cCCCeEE
Confidence 4678999999999999876 556666643 22211 14578899999999864333222222333 2345799
Q ss_pred EeeCCC-CChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCc---EEeccc
Q 004248 609 YKYMPN-GDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFE---VRLGSL 684 (766)
Q Consensus 609 ~Ey~~~-GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~---~kl~DF 684 (766)
|||+++ -++.+++...... ...-+....++..|-+.+.-||.. .|||+||..+||++.+++. +.+.||
T Consensus 89 ME~~~g~~~vk~~i~~~~~~-----~~~d~~~~~~~~~iG~~igklH~n---diiHGDLTTSNill~~~~~~~~~~lIdf 160 (229)
T KOG3087|consen 89 MEFIDGASTVKDFILSTMED-----ESEDEGLAELARRIGELIGKLHDN---DIIHGDLTTSNILLRSDGNQITPILIDF 160 (229)
T ss_pred EEeccchhHHHHHHHHHccC-----cccchhHHHHHHHHHHHHHHhhhC---CeecccccccceEEecCCCcCceEEEee
Confidence 999986 3788888654321 122223367788888899999998 9999999999999986654 579999
Q ss_pred hhhhh
Q 004248 685 SEVCA 689 (766)
Q Consensus 685 G~a~~ 689 (766)
|++..
T Consensus 161 gls~~ 165 (229)
T KOG3087|consen 161 GLSSV 165 (229)
T ss_pred cchhc
Confidence 99754
No 481
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.79 E-value=8.1e-08 Score=99.88 Aligned_cols=141 Identities=11% Similarity=0.041 Sum_probs=99.1
Q ss_pred ceeecCCcceEEEEEEcCCcEEEEEEeecccc------------CHHHHHHHHHHHhhcCCCC--cccceeEEEec----
Q 004248 540 NLIKNGHSGDLFRGILEGGIPVVIKRIDLQSV------------KTEAYLLELDFFSKVSHAR--LVPLLGHCMER---- 601 (766)
Q Consensus 540 ~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~------------~~~~~~~E~~~l~~l~H~n--iv~l~~~~~~~---- 601 (766)
+.+-+-....|++... +|+.+.||+...... ....+.+|.+.+.++.... +.+.+++....
T Consensus 28 e~v~~~~~rrvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~ 106 (268)
T PRK15123 28 EVFRELEGRRTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPA 106 (268)
T ss_pred cEEecCCCceEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCc
Confidence 4444444455777655 567899997633220 1124889999998884333 33445444321
Q ss_pred CCcEEEEEeeCCCC-ChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCC-----
Q 004248 602 ENEKFLVYKYMPNG-DLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDD----- 675 (766)
Q Consensus 602 ~~~~~lV~Ey~~~G-sL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~----- 675 (766)
....++|+|++++- +|.+++..... ...+...+..++.+++..+.-||.. +|+|+|++++|||++.
T Consensus 107 ~~~s~LVte~l~~~~sL~~~~~~~~~-----~~~~~~~~~~ll~~la~~i~~LH~~---Gi~HgDL~~~NiLl~~~~~~~ 178 (268)
T PRK15123 107 TRTSFIITEDLAPTISLEDYCADWAT-----NPPDPRLKRMLIKRVATMVRDMHAA---GINHRDCYICHFLLHLPFPGR 178 (268)
T ss_pred cceeEEEEeeCCCCccHHHHHHhhcc-----cCCCHHHHHHHHHHHHHHHHHHHHC---cCccCCCChhhEEEeccccCC
Confidence 12478999999975 79988853211 1245667778999999999999998 9999999999999985
Q ss_pred --CCcEEeccchhhhh
Q 004248 676 --KFEVRLGSLSEVCA 689 (766)
Q Consensus 676 --~~~~kl~DFG~a~~ 689 (766)
++.+.++||+.++.
T Consensus 179 ~~~~~~~LIDl~r~~~ 194 (268)
T PRK15123 179 EEDLKLSVIDLHRAQI 194 (268)
T ss_pred CCCceEEEEECCcccc
Confidence 46799999998753
No 482
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=98.77 E-value=4.5e-10 Score=115.20 Aligned_cols=239 Identities=23% Similarity=0.305 Sum_probs=134.1
Q ss_pred CCEEEEEcCCCCcCCCCCCCCccchhhhccCCCCCEEecCCCCCCCC----Cchhhh------hCCCCCCEEEccCCCCC
Q 004248 86 GSVVGINISGFRRTRLGSQNPRFAADALVNLTHLASFNASRFLLPGS----IPDWLG------QQLPTLQALDLRSCSIS 155 (766)
Q Consensus 86 ~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~L~ls~n~l~g~----ip~~~~------~~l~~L~~L~Ls~N~l~ 155 (766)
..++.|+|+|+.. |.--.......+.+.++|+..++|+. ++|. +|+.+- ...++|++||||.|-|.
T Consensus 30 ~s~~~l~lsgnt~---G~EAa~~i~~~L~~~~~L~~v~~sd~-ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA~G 105 (382)
T KOG1909|consen 30 DSLTKLDLSGNTF---GTEAARAIAKVLASKKELREVNLSDM-FTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNAFG 105 (382)
T ss_pred CceEEEeccCCch---hHHHHHHHHHHHhhcccceeeehHhh-hcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccccC
Confidence 3578999998532 22111222345777888998888864 5554 343221 13678999999999886
Q ss_pred ccCCcc----cCCCCCCcEEEeecCcCCCCC-------------CccccCCCCCCEEEccCCCCCCC----CCcccCCCC
Q 004248 156 GVIPFS----LGNLTNLTSLYLSDNGLTGTI-------------PSSLGQLSVLSVLDLSRNSLTGN----IPTSFGLLK 214 (766)
Q Consensus 156 g~~p~~----l~~l~~L~~L~Ls~N~l~~~~-------------p~~l~~L~~L~~L~Ls~N~l~~~----~p~~~~~l~ 214 (766)
-.-+.. +..++.|++|+|.+|.+.-.- ..-.+.-+.|+++...+|++... +...|...+
T Consensus 106 ~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~rNrlen~ga~~~A~~~~~~~ 185 (382)
T KOG1909|consen 106 PKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGRALFELAVNKKAASKPKLRVFICGRNRLENGGATALAEAFQSHP 185 (382)
T ss_pred ccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHHHHhccCCCcceEEEEeeccccccccHHHHHHHHHhcc
Confidence 443333 456788899999888875211 11233445677777777776421 112344556
Q ss_pred CCCEEeccCCcCCCC----CCCCCCCCCCccEEEccCCCCCCC----CccccCCCCCCCEEEccCCcCCccCCcccCCCC
Q 004248 215 NLSSLDISSNYLTGS----IPPGLGTLSKLQYLNVSNNSLASS----IPAQLGDLDSLVDLDLSMNSLSGSVPSELRGLR 286 (766)
Q Consensus 215 ~L~~L~Ls~N~l~~~----~p~~l~~l~~L~~L~Ls~N~l~~~----~p~~l~~l~~L~~L~Ls~N~l~g~~p~~l~~l~ 286 (766)
.|+.+.++.|.+... +...+..++.|+.|||.+|-|+.. +...+..+++|++|++++|.+...-...|.
T Consensus 186 ~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~dcll~~~Ga~a~~--- 262 (382)
T KOG1909|consen 186 TLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDCLLENEGAIAFV--- 262 (382)
T ss_pred ccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheeecccccccccccHHHHH---
Confidence 667777776665311 112345566666666666666532 222344455666666666655432111110
Q ss_pred CCCEEEccCccCccccCCCccCCCCcccEEEccCCCCCCC----CCcccCCCCCCCEEEccCCCCC
Q 004248 287 SLQKFVIGNNFLSGNLSVNLFPTVSQLQIIVLRQNGFTGP----PPDVLWSMPQLRLLDISRNNFT 348 (766)
Q Consensus 287 ~L~~L~ls~N~l~g~~~~~~~~~l~~L~~L~L~~N~l~~~----~p~~l~~l~~L~~L~Ls~N~l~ 348 (766)
..+-...++|+.|.|.+|.++.. +...+...+.|..|+|+.|.+.
T Consensus 263 -----------------~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l~ 311 (382)
T KOG1909|consen 263 -----------------DALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRLG 311 (382)
T ss_pred -----------------HHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCccccc
Confidence 00001234566666666666532 2233445778888888888883
No 483
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.74 E-value=2e-09 Score=120.18 Aligned_cols=246 Identities=27% Similarity=0.287 Sum_probs=149.0
Q ss_pred cCCCCCEEecCCCCCCCCCchhhhhCCCCCCEEEccCCCCCccCCcccCCCCCCcEEEeecCcCCCCCCccccCCCCCCE
Q 004248 115 NLTHLASFNASRFLLPGSIPDWLGQQLPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPSSLGQLSVLSV 194 (766)
Q Consensus 115 ~l~~L~~L~ls~n~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~ 194 (766)
.++.+..+++..|.+.- +-..+. .+.+|+.|+|..|.|.... ..+..+++|++|+|++|.|+... .+..++.|+.
T Consensus 70 ~l~~l~~l~l~~n~i~~-~~~~l~-~~~~l~~l~l~~n~i~~i~-~~l~~~~~L~~L~ls~N~I~~i~--~l~~l~~L~~ 144 (414)
T KOG0531|consen 70 SLTSLKELNLRQNLIAK-ILNHLS-KLKSLEALDLYDNKIEKIE-NLLSSLVNLQVLDLSFNKITKLE--GLSTLTLLKE 144 (414)
T ss_pred HhHhHHhhccchhhhhh-hhcccc-cccceeeeeccccchhhcc-cchhhhhcchheecccccccccc--chhhccchhh
Confidence 44555555666665532 111122 3778888888888887543 22677888888888888887543 3566777888
Q ss_pred EEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCC-CCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCc
Q 004248 195 LDLSRNSLTGNIPTSFGLLKNLSSLDISSNYLTGSIPPG-LGTLSKLQYLNVSNNSLASSIPAQLGDLDSLVDLDLSMNS 273 (766)
Q Consensus 195 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~ 273 (766)
|++++|.++. ...+..+++|+.+++++|.+...-+ . ...+.+|+.+++.+|.+... ..+..+..+..+++..|.
T Consensus 145 L~l~~N~i~~--~~~~~~l~~L~~l~l~~n~i~~ie~-~~~~~~~~l~~l~l~~n~i~~i--~~~~~~~~l~~~~l~~n~ 219 (414)
T KOG0531|consen 145 LNLSGNLISD--ISGLESLKSLKLLDLSYNRIVDIEN-DELSELISLEELDLGGNSIREI--EGLDLLKKLVLLSLLDNK 219 (414)
T ss_pred heeccCcchh--ccCCccchhhhcccCCcchhhhhhh-hhhhhccchHHHhccCCchhcc--cchHHHHHHHHhhccccc
Confidence 8888888873 2355668888888888888874333 1 46777888888888887532 233344455555777777
Q ss_pred CCccCCcccCCCC--CCCEEEccCccCccccCCCccCCCCcccEEEccCCCCCCCCCcccCCCCCCCEEEccCCCCCCCC
Q 004248 274 LSGSVPSELRGLR--SLQKFVIGNNFLSGNLSVNLFPTVSQLQIIVLRQNGFTGPPPDVLWSMPQLRLLDISRNNFTGPL 351 (766)
Q Consensus 274 l~g~~p~~l~~l~--~L~~L~ls~N~l~g~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~ 351 (766)
++-.-+ +..+. .|+.+++++|.+.-. + .....+..+..|++.+|++...- .+...+.+..+.+..|.+....
T Consensus 220 i~~~~~--l~~~~~~~L~~l~l~~n~i~~~-~-~~~~~~~~l~~l~~~~n~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 293 (414)
T KOG0531|consen 220 ISKLEG--LNELVMLHLRELYLSGNRISRS-P-EGLENLKNLPVLDLSSNRISNLE--GLERLPKLSELWLNDNKLALSE 293 (414)
T ss_pred ceeccC--cccchhHHHHHHhcccCccccc-c-ccccccccccccchhhccccccc--cccccchHHHhccCcchhcchh
Confidence 763222 12222 267777777777521 1 12355667777788777776432 2344556666777777765221
Q ss_pred ---CcccccCCCCCcEEEccCCcCccCC
Q 004248 352 ---PNSRSNVNTSTVELNISQNMFYGGL 376 (766)
Q Consensus 352 ---p~~~~~~~~~l~~L~ls~N~l~g~~ 376 (766)
..........+....+..|......
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (414)
T KOG0531|consen 294 AISQEYITSAAPTLVTLTLELNPIRKIS 321 (414)
T ss_pred hhhccccccccccccccccccCcccccc
Confidence 1111223345555666666555433
No 484
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.72 E-value=9.2e-09 Score=122.87 Aligned_cols=248 Identities=25% Similarity=0.265 Sum_probs=121.6
Q ss_pred CCCEEecCCCCC-CCCCchhhhhCCCCCCEEEccCCCCCccCCcccCCCCCCcEEEeecCcCCCCCCccccCCCCCCEEE
Q 004248 118 HLASFNASRFLL-PGSIPDWLGQQLPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPSSLGQLSVLSVLD 196 (766)
Q Consensus 118 ~L~~L~ls~n~l-~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~ 196 (766)
.|++|-+..|.. ...++..++..++.|++|||++|.=-+.+|..+++|-+|++|+|++..++ .+|..+.+|..|.+|+
T Consensus 546 ~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L~~t~I~-~LP~~l~~Lk~L~~Ln 624 (889)
T KOG4658|consen 546 KLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLDLSDTGIS-HLPSGLGNLKKLIYLN 624 (889)
T ss_pred ccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcccccCCCcc-ccchHHHHHHhhheec
Confidence 455555555541 34455555555666666666666655566666666666666666666666 5666666666666666
Q ss_pred ccCCCCCCCCCcccCCCCCCCEEeccCCcCC--CCCCCCCCCCCCccEEEccCCCCCCCCccccCCCCCCC----EEEcc
Q 004248 197 LSRNSLTGNIPTSFGLLKNLSSLDISSNYLT--GSIPPGLGTLSKLQYLNVSNNSLASSIPAQLGDLDSLV----DLDLS 270 (766)
Q Consensus 197 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~--~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~----~L~Ls 270 (766)
+..+.....+|.....|++|++|.+..-... ...-..+.++..|+.|....... .+-..+..++.|. .+.+.
T Consensus 625 l~~~~~l~~~~~i~~~L~~Lr~L~l~~s~~~~~~~~l~el~~Le~L~~ls~~~~s~--~~~e~l~~~~~L~~~~~~l~~~ 702 (889)
T KOG4658|consen 625 LEVTGRLESIPGILLELQSLRVLRLPRSALSNDKLLLKELENLEHLENLSITISSV--LLLEDLLGMTRLRSLLQSLSIE 702 (889)
T ss_pred cccccccccccchhhhcccccEEEeeccccccchhhHHhhhcccchhhheeecchh--HhHhhhhhhHHHHHHhHhhhhc
Confidence 6666554445555555666666666543311 11112223334444333322211 0001111222222 12222
Q ss_pred CCcCCccCCcccCCCCCCCEEEccCccCccccCCC-------c-cCCCCcccEEEccCCCCCCCCCcccCCCCCCCEEEc
Q 004248 271 MNSLSGSVPSELRGLRSLQKFVIGNNFLSGNLSVN-------L-FPTVSQLQIIVLRQNGFTGPPPDVLWSMPQLRLLDI 342 (766)
Q Consensus 271 ~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~~~~~-------~-~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L 342 (766)
.+.. ...+..+..+.+|+.|.+.+..++...... . |.++.++...+.... ..+.+..-.++|+.|.+
T Consensus 703 ~~~~-~~~~~~~~~l~~L~~L~i~~~~~~e~~~~~~~~~~~~~~f~~l~~~~~~~~~~~----r~l~~~~f~~~L~~l~l 777 (889)
T KOG4658|consen 703 GCSK-RTLISSLGSLGNLEELSILDCGISEIVIEWEESLIVLLCFPNLSKVSILNCHML----RDLTWLLFAPHLTSLSL 777 (889)
T ss_pred cccc-ceeecccccccCcceEEEEcCCCchhhcccccccchhhhHHHHHHHHhhccccc----cccchhhccCcccEEEE
Confidence 2222 134556677888888888877765221110 0 111111111111111 12334445688999999
Q ss_pred cCCCCCCCCCcccccCCCCCcEEEccCCcCcc
Q 004248 343 SRNNFTGPLPNSRSNVNTSTVELNISQNMFYG 374 (766)
Q Consensus 343 s~N~l~g~~p~~~~~~~~~l~~L~ls~N~l~g 374 (766)
........+.... .....+..+-+..+.+.+
T Consensus 778 ~~~~~~e~~i~~~-k~~~~l~~~i~~f~~~~~ 808 (889)
T KOG4658|consen 778 VSCRLLEDIIPKL-KALLELKELILPFNKLEG 808 (889)
T ss_pred ecccccccCCCHH-HHhhhcccEEeccccccc
Confidence 8776654433221 222333334444444444
No 485
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.70 E-value=7.7e-09 Score=81.98 Aligned_cols=59 Identities=41% Similarity=0.579 Sum_probs=30.6
Q ss_pred CCCEEEccCCCCCccCCcccCCCCCCcEEEeecCcCCCCCCccccCCCCCCEEEccCCC
Q 004248 143 TLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPSSLGQLSVLSVLDLSRNS 201 (766)
Q Consensus 143 ~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~ 201 (766)
+|++|++++|+++...+..|.++++|++|++++|+++...|..|.++++|++|++++|+
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 45555555555554444455555555555555555554444455555555555555554
No 486
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.69 E-value=9.2e-08 Score=93.82 Aligned_cols=124 Identities=18% Similarity=0.185 Sum_probs=81.1
Q ss_pred eEEEEEEcCCcEEEEEEeecccc----------------------C-----HHHHHHHHHHHhhcCCCC--cccceeEEE
Q 004248 549 DLFRGILEGGIPVVIKRIDLQSV----------------------K-----TEAYLLELDFFSKVSHAR--LVPLLGHCM 599 (766)
Q Consensus 549 ~Vy~~~~~~g~~vavK~l~~~~~----------------------~-----~~~~~~E~~~l~~l~H~n--iv~l~~~~~ 599 (766)
.||.|...+|..||||.-+.... . .....+|.+.|.++..-. +-+.++ +
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~-~- 78 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYD-Y- 78 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEE-E-
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEE-E-
Confidence 48999999999999998753210 0 124678999999997664 445553 2
Q ss_pred ecCCcEEEEEeeCC--CCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhh-ccCCCCCeEecCCCCCCeeeCCC
Q 004248 600 ERENEKFLVYKYMP--NGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYL-HHECTLPFVHRDVQASSILLDDK 676 (766)
Q Consensus 600 ~~~~~~~lV~Ey~~--~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yL-H~~~~~~iiHrDlKp~NILl~~~ 676 (766)
. ...+||||++ |..+..+.... ++......++.+++..+..+ |.. +|||+|+.+.||+++++
T Consensus 79 ~---~~~ivME~I~~~G~~~~~l~~~~---------~~~~~~~~~~~~il~~~~~~~~~~---givHGDLs~~NIlv~~~ 143 (188)
T PF01163_consen 79 N---RNVIVMEYIGEDGVPLPRLKDVD---------LSPEEPKELLEEILEEIIKMLHKA---GIVHGDLSEYNILVDDG 143 (188)
T ss_dssp E---TTEEEEE--EETTEEGGCHHHCG---------GGGSTHHHHHHHHHHHHHHHHHCT---TEEESS-STTSEEEETT
T ss_pred e---CCEEEEEecCCCccchhhHHhcc---------ccchhHHHHHHHHHHHHHHHHHhc---CceecCCChhhEEeecc
Confidence 2 2489999999 54454433211 11334456777888866665 565 99999999999999987
Q ss_pred CcEEeccchhhhhc
Q 004248 677 FEVRLGSLSEVCAQ 690 (766)
Q Consensus 677 ~~~kl~DFG~a~~~ 690 (766)
.+.|+|||-+...
T Consensus 144 -~~~iIDf~qav~~ 156 (188)
T PF01163_consen 144 -KVYIIDFGQAVDS 156 (188)
T ss_dssp -CEEE--GTTEEET
T ss_pred -eEEEEecCcceec
Confidence 9999999987544
No 487
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.68 E-value=9.7e-09 Score=81.39 Aligned_cols=59 Identities=49% Similarity=0.594 Sum_probs=29.5
Q ss_pred CCcEEEeecCcCCCCCCccccCCCCCCEEEccCCCCCCCCCcccCCCCCCCEEeccCCc
Q 004248 167 NLTSLYLSDNGLTGTIPSSLGQLSVLSVLDLSRNSLTGNIPTSFGLLKNLSSLDISSNY 225 (766)
Q Consensus 167 ~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 225 (766)
+|++|+|++|+++...+..|.++++|++|++++|+++...|..|.++++|++|++++|+
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 44555555555553333444555555555555555554444445555555555555544
No 488
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.62 E-value=1.7e-07 Score=101.37 Aligned_cols=171 Identities=15% Similarity=0.159 Sum_probs=125.9
Q ss_pred ceEEEEE-EcCCcEEEEEEeeccccC-HHHHHHHHHHHhhcCCCCcccceeEEEe---cCCcEEEEEeeCCC-CChhhhh
Q 004248 548 GDLFRGI-LEGGIPVVIKRIDLQSVK-TEAYLLELDFFSKVSHARLVPLLGHCME---RENEKFLVYKYMPN-GDLSSSL 621 (766)
Q Consensus 548 g~Vy~~~-~~~g~~vavK~l~~~~~~-~~~~~~E~~~l~~l~H~niv~l~~~~~~---~~~~~~lV~Ey~~~-GsL~~~l 621 (766)
.+.||+. ..||..++.||+.-.+.. ......-++.++++.|+|||++.+++.. .+..+.+||+|.|+ ++|.++-
T Consensus 290 ~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~~ 369 (655)
T KOG3741|consen 290 ITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDLY 369 (655)
T ss_pred ceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHHH
Confidence 5689998 578999999999433222 2233445778999999999999987652 13468999999996 5787765
Q ss_pred hccC-CC-------CCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcCCC
Q 004248 622 YRKT-NT-------EDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGD 693 (766)
Q Consensus 622 ~~~~-~~-------~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~~~ 693 (766)
.... .. .......+++..+.|+.|++.||.++|+. +..-+-+.+++||++.+.+++|+.-|+......+
T Consensus 370 F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHss---GLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~d 446 (655)
T KOG3741|consen 370 FANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSS---GLACKTLDLKKILVTGKMRIRISGCGIMDVLQED 446 (655)
T ss_pred ccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhc---CceeecccHhHeEeeCcceEEEecccceeeecCC
Confidence 3221 11 22334678899999999999999999997 8888999999999999999999877765544332
Q ss_pred CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCC
Q 004248 694 AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNH 744 (766)
Q Consensus 694 ~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~ 744 (766)
.. |.++. -.+-|.=.||.+++.|.||..
T Consensus 447 ~~-----------~~le~------------~Qq~D~~~lG~ll~aLAt~~~ 474 (655)
T KOG3741|consen 447 PT-----------EPLES------------QQQNDLRDLGLLLLALATGTE 474 (655)
T ss_pred CC-----------cchhH------------HhhhhHHHHHHHHHHHhhccc
Confidence 21 11111 134577789999999999953
No 489
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.60 E-value=1.4e-08 Score=121.37 Aligned_cols=126 Identities=36% Similarity=0.455 Sum_probs=64.4
Q ss_pred CCCEEEccCCCCCccCCcccCCCCCCcEEEeecCc--CCCCCCccccCCCCCCEEEccCCCCCCCCCcccCCCCCCCEEe
Q 004248 143 TLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNG--LTGTIPSSLGQLSVLSVLDLSRNSLTGNIPTSFGLLKNLSSLD 220 (766)
Q Consensus 143 ~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~--l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 220 (766)
..+...+-+|.+. .++... ..++|++|-+..|. +....+..|..++.|++|||++|.=-+.+|.++++|-+|++|+
T Consensus 524 ~~rr~s~~~~~~~-~~~~~~-~~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~ 601 (889)
T KOG4658|consen 524 SVRRMSLMNNKIE-HIAGSS-ENPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLD 601 (889)
T ss_pred heeEEEEeccchh-hccCCC-CCCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhccc
Confidence 4445555555443 122221 12245555555554 3222222344555666666665554455566666666666666
Q ss_pred ccCCcCCCCCCCCCCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccC
Q 004248 221 ISSNYLTGSIPPGLGTLSKLQYLNVSNNSLASSIPAQLGDLDSLVDLDLSM 271 (766)
Q Consensus 221 Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~ 271 (766)
|++..+. .+|.++++|.+|.+|++..+.-...+|.....+++|++|.+..
T Consensus 602 L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~ 651 (889)
T KOG4658|consen 602 LSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPR 651 (889)
T ss_pred ccCCCcc-ccchHHHHHHhhheeccccccccccccchhhhcccccEEEeec
Confidence 6665555 4555666666666666655554444444444455666655543
No 490
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=98.52 E-value=4.6e-08 Score=115.85 Aligned_cols=90 Identities=8% Similarity=-0.166 Sum_probs=65.5
Q ss_pred HhhhhccCCCCCeEecCCCCC-CeeeCCCCcEEeccchhhhhcCC-----CCccceeeecccCCCCCCCCceeeeeeeee
Q 004248 649 GLSYLHHECTLPFVHRDVQAS-SILLDDKFEVRLGSLSEVCAQGG-----DAHQSRITRLLRLPQSSEQGSSGMVIYLFI 722 (766)
Q Consensus 649 gL~yLH~~~~~~iiHrDlKp~-NILl~~~~~~kl~DFG~a~~~~~-----~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~ 722 (766)
+..|.|.. ..-.|++.+|. |++++.+...++.|||.++.... ......||+.|+|||.+.+..
T Consensus 488 ~~~~~~~~--~~~~~~~~~p~~~~~~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~vGT~~Y~APE~l~~~~--------- 556 (669)
T cd05610 488 GSQSGSYP--AITPTQKPRPHGNLYQTPKQVKIGTPYRTPKSVRRGAAPVEGERILGTPDYLAPELLLGKP--------- 556 (669)
T ss_pred ccccCCCc--ccCCCCCCCCCCceeECCccccccccCCCchhhhcccccccCCceeeCccccCHHHcCCCC---------
Confidence 34455532 22345666666 66777777788999998876521 233457899999999886544
Q ss_pred cccccceecchHHHHHHhcCCCCCCCC
Q 004248 723 IFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 723 ~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
++.++|||||||++|||+||+.||...
T Consensus 557 ~~~~~DiwSlG~il~ElltG~~pf~~~ 583 (669)
T cd05610 557 HGPAVDWWALGVCLFEFLTGIPPFNDE 583 (669)
T ss_pred CCcHHHHHHHHHHHHHHHHCCCCCCCC
Confidence 367999999999999999999999543
No 491
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.48 E-value=3e-09 Score=117.89 Aligned_cols=126 Identities=29% Similarity=0.360 Sum_probs=68.7
Q ss_pred CCCEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCCCCCCCccEEEccCCCCCCCCcc-ccCCCCCCCEEEc
Q 004248 191 VLSVLDLSRNSLTGNIPTSFGLLKNLSSLDISSNYLTGSIPPGLGTLSKLQYLNVSNNSLASSIPA-QLGDLDSLVDLDL 269 (766)
Q Consensus 191 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~-~l~~l~~L~~L~L 269 (766)
.|.+.+.++|.+. .+..++.-++.|+.|||++|+++.. +.+..|++|++|||++|.+.. +|. ....+. |..|.|
T Consensus 165 ~L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~~-vp~l~~~gc~-L~~L~l 239 (1096)
T KOG1859|consen 165 KLATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLRH-VPQLSMVGCK-LQLLNL 239 (1096)
T ss_pred hHhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhh--HHHHhcccccccccccchhcc-ccccchhhhh-heeeee
Confidence 4555566666665 4455555566666666666666532 245566666666666666653 232 122222 666666
Q ss_pred cCCcCCccCCcccCCCCCCCEEEccCccCccccCCCccCCCCcccEEEccCCCC
Q 004248 270 SMNSLSGSVPSELRGLRSLQKFVIGNNFLSGNLSVNLFPTVSQLQIIVLRQNGF 323 (766)
Q Consensus 270 s~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~~~~~~~~~l~~L~~L~L~~N~l 323 (766)
++|.++.. ..+.+|++|+.||++.|-|++.-....+..+..|+.|.|.+|.+
T Consensus 240 rnN~l~tL--~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl 291 (1096)
T KOG1859|consen 240 RNNALTTL--RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPL 291 (1096)
T ss_pred cccHHHhh--hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCcc
Confidence 66665522 23455666666666666665433222233455556666666654
No 492
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=98.48 E-value=2.3e-08 Score=102.82 Aligned_cols=188 Identities=19% Similarity=0.228 Sum_probs=132.5
Q ss_pred hhhccCCCCCEEecCCCCCCCCCchhhh---hCCCCCCEEEccCCCCCcc-------------CCcccCCCCCCcEEEee
Q 004248 111 DALVNLTHLASFNASRFLLPGSIPDWLG---QQLPTLQALDLRSCSISGV-------------IPFSLGNLTNLTSLYLS 174 (766)
Q Consensus 111 ~~l~~l~~L~~L~ls~n~l~g~ip~~~~---~~l~~L~~L~Ls~N~l~g~-------------~p~~l~~l~~L~~L~Ls 174 (766)
..+...++|+.+|||+|.|.-.-++.+. +++..|+.|.|.+|.+.-. .....++-+.|+++...
T Consensus 86 ~aL~~~~~L~~ldLSDNA~G~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~ 165 (382)
T KOG1909|consen 86 KALLGCPKLQKLDLSDNAFGPKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGRALFELAVNKKAASKPKLRVFICG 165 (382)
T ss_pred HHHhcCCceeEeeccccccCccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHHHHhccCCCcceEEEEee
Confidence 3566677999999999999766555432 3488999999999998521 11234556789999999
Q ss_pred cCcCCCC----CCccccCCCCCCEEEccCCCCCCC----CCcccCCCCCCCEEeccCCcCCCC----CCCCCCCCCCccE
Q 004248 175 DNGLTGT----IPSSLGQLSVLSVLDLSRNSLTGN----IPTSFGLLKNLSSLDISSNYLTGS----IPPGLGTLSKLQY 242 (766)
Q Consensus 175 ~N~l~~~----~p~~l~~L~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~l~~l~~L~~ 242 (766)
+|++... +...|...+.|+.+.++.|.+.-. +-..|..+++|+.|||.+|-|+-. +...+..++.|+.
T Consensus 166 rNrlen~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~E 245 (382)
T KOG1909|consen 166 RNRLENGGATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRE 245 (382)
T ss_pred ccccccccHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchhee
Confidence 9998632 233566778999999999987521 223567899999999999998732 3455677889999
Q ss_pred EEccCCCCCCCCcccc-----CCCCCCCEEEccCCcCCcc----CCcccCCCCCCCEEEccCccC
Q 004248 243 LNVSNNSLASSIPAQL-----GDLDSLVDLDLSMNSLSGS----VPSELRGLRSLQKFVIGNNFL 298 (766)
Q Consensus 243 L~Ls~N~l~~~~p~~l-----~~l~~L~~L~Ls~N~l~g~----~p~~l~~l~~L~~L~ls~N~l 298 (766)
|++++|.+...-...+ ...++|+.|.|.+|.++.. +-..+...+.|..|+|+.|.+
T Consensus 246 l~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l 310 (382)
T KOG1909|consen 246 LNLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRL 310 (382)
T ss_pred ecccccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCcccc
Confidence 9999999975432222 2367888888888887632 112233345555555555555
No 493
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.44 E-value=8.2e-07 Score=89.56 Aligned_cols=132 Identities=17% Similarity=0.153 Sum_probs=91.0
Q ss_pred CccceeecCCcceEEEEEEcCCcEEEEEEeecccc-----------------------CHHHHHHHHHHHhhcCCC--Cc
Q 004248 537 SDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSV-----------------------KTEAYLLELDFFSKVSHA--RL 591 (766)
Q Consensus 537 ~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~-----------------------~~~~~~~E~~~l~~l~H~--ni 591 (766)
...+.||.|.-+.||.|..+.|.++|||.=+.... .+....+|.++|.++... .|
T Consensus 94 ~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~V 173 (304)
T COG0478 94 AIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVKV 173 (304)
T ss_pred hhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCCC
Confidence 34589999999999999999999999996432111 022467899999999654 56
Q ss_pred ccceeEEEecCCcEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHH-HHHHHHHHHhhhhccCCCCCeEecCCCCCC
Q 004248 592 VPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRL-KIAIGAAEGLSYLHHECTLPFVHRDVQASS 670 (766)
Q Consensus 592 v~l~~~~~~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~-~i~~~ia~gL~yLH~~~~~~iiHrDlKp~N 670 (766)
-+-++ -+...+||||++|-.|...=-. .-..+... .|+.++..+. + . +|||+|+.+=|
T Consensus 174 P~P~~-----~nRHaVvMe~ieG~eL~~~r~~---------~en~~~il~~il~~~~~~~---~-~---GiVHGDlSefN 232 (304)
T COG0478 174 PKPIA-----WNRHAVVMEYIEGVELYRLRLD---------VENPDEILDKILEEVRKAY---R-R---GIVHGDLSEFN 232 (304)
T ss_pred CCccc-----cccceeeeehcccceeecccCc---------ccCHHHHHHHHHHHHHHHH---H-c---CccccCCchhe
Confidence 66665 2356899999998555432100 01112222 2333333332 3 3 89999999999
Q ss_pred eeeCCCCcEEeccchhhhh
Q 004248 671 ILLDDKFEVRLGSLSEVCA 689 (766)
Q Consensus 671 ILl~~~~~~kl~DFG~a~~ 689 (766)
|+++++|.+.+.||--+..
T Consensus 233 IlV~~dg~~~vIDwPQ~v~ 251 (304)
T COG0478 233 ILVTEDGDIVVIDWPQAVP 251 (304)
T ss_pred EEEecCCCEEEEeCccccc
Confidence 9999999999999976543
No 494
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.37 E-value=2.5e-06 Score=85.69 Aligned_cols=108 Identities=20% Similarity=0.204 Sum_probs=83.1
Q ss_pred HHHHHHHHHHHhhcCCC--CcccceeEEEecC---CcEEEEEeeCCCC-ChhhhhhccCCCCCcCCCCCHHHHHHHHHHH
Q 004248 573 TEAYLLELDFFSKVSHA--RLVPLLGHCMERE---NEKFLVYKYMPNG-DLSSSLYRKTNTEDDLQSLDWITRLKIAIGA 646 (766)
Q Consensus 573 ~~~~~~E~~~l~~l~H~--niv~l~~~~~~~~---~~~~lV~Ey~~~G-sL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i 646 (766)
..+..+|...+.+++.. .+.+.+++..... ...++|+|++++- +|.+++..... .+...+..++.++
T Consensus 55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~-------~~~~~~~~ll~~l 127 (206)
T PF06293_consen 55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQ-------LDPSQRRELLRAL 127 (206)
T ss_pred chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcc-------cchhhHHHHHHHH
Confidence 45688899888888533 3445555544321 1358999999974 79998865321 4566778899999
Q ss_pred HHHhhhhccCCCCCeEecCCCCCCeeeCCCC---cEEeccchhhhhc
Q 004248 647 AEGLSYLHHECTLPFVHRDVQASSILLDDKF---EVRLGSLSEVCAQ 690 (766)
Q Consensus 647 a~gL~yLH~~~~~~iiHrDlKp~NILl~~~~---~~kl~DFG~a~~~ 690 (766)
++.++-||+. +|+|+|+++.|||++.+. ++.+.||+-++..
T Consensus 128 ~~~i~~lH~~---gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~ 171 (206)
T PF06293_consen 128 ARLIAKLHDA---GIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFR 171 (206)
T ss_pred HHHHHHHHHC---cCCCCCCCcccEEEeCCCCceeEEEEcchhceeC
Confidence 9999999998 999999999999999887 7999999987643
No 495
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.36 E-value=6.1e-09 Score=115.51 Aligned_cols=126 Identities=36% Similarity=0.400 Sum_probs=75.2
Q ss_pred CCcEEEeecCcCCCCCCccccCCCCCCEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCC-CCCCCCccEEEc
Q 004248 167 NLTSLYLSDNGLTGTIPSSLGQLSVLSVLDLSRNSLTGNIPTSFGLLKNLSSLDISSNYLTGSIPPG-LGTLSKLQYLNV 245 (766)
Q Consensus 167 ~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-l~~l~~L~~L~L 245 (766)
.|.+.+.++|.+. .+..++.-++.|+.|||++|+++.. ..+..|++|++|||++|.+. .+|.. ...+ +|+.|.+
T Consensus 165 ~L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc-~L~~L~l 239 (1096)
T KOG1859|consen 165 KLATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLR-HVPQLSMVGC-KLQLLNL 239 (1096)
T ss_pred hHhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhh--HHHHhcccccccccccchhc-cccccchhhh-hheeeee
Confidence 3555666666665 4555666666777777777777632 25666777777777777776 34432 1222 3777777
Q ss_pred cCCCCCCCCccccCCCCCCCEEEccCCcCCccCC-cccCCCCCCCEEEccCccCc
Q 004248 246 SNNSLASSIPAQLGDLDSLVDLDLSMNSLSGSVP-SELRGLRSLQKFVIGNNFLS 299 (766)
Q Consensus 246 s~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p-~~l~~l~~L~~L~ls~N~l~ 299 (766)
++|.++.. ..+.+|.+|+.||+++|-+.+.-- ..+..|..|+.|+|.+|.+.
T Consensus 240 rnN~l~tL--~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 240 RNNALTTL--RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred cccHHHhh--hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccc
Confidence 77766532 235567777777777776654211 22344556666777777653
No 496
>PF08263 LRRNT_2: Leucine rich repeat N-terminal domain; InterPro: IPR013210 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. This domain is often found at the N terminus of tandem leucine rich repeats.; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1OGQ_A.
Probab=98.34 E-value=6.4e-07 Score=65.21 Aligned_cols=36 Identities=33% Similarity=0.798 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHHhCCC-C---CCCCCCC--CCCCCCccceeec
Q 004248 48 RTELAALFELRSSLGL-R---RRDWPRK--VDPCLVWNGVRCQ 84 (766)
Q Consensus 48 ~~~~~aLl~~k~~l~~-~---~~~W~~~--~~~C~~W~gv~C~ 84 (766)
++|++||++||+++.. . +.+|+.. .+|| +|.||+|+
T Consensus 2 ~~d~~aLl~~k~~l~~~~~~~l~~W~~~~~~~~C-~W~GV~Cd 43 (43)
T PF08263_consen 2 NQDRQALLAFKKSLNNDPSGVLSSWNPSSDSDPC-SWSGVTCD 43 (43)
T ss_dssp HHHHHHHHHHHHCTT-SC-CCCTT--TT--S-CC-CSTTEEE-
T ss_pred cHHHHHHHHHHHhcccccCcccccCCCcCCCCCe-eeccEEeC
Confidence 5799999999999974 3 5899876 4655 89999995
No 497
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.30 E-value=7.2e-06 Score=83.54 Aligned_cols=139 Identities=15% Similarity=0.111 Sum_probs=82.5
Q ss_pred cceeecCCcceEEEEEEcCCcEEEEEEeeccccCHHHHHHHHHHHhhcCCCCc--ccceeEEEecCCcEEEEEeeCCCCC
Q 004248 539 ANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARL--VPLLGHCMERENEKFLVYKYMPNGD 616 (766)
Q Consensus 539 ~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~H~ni--v~l~~~~~~~~~~~~lV~Ey~~~Gs 616 (766)
-..||+|..+.||+. .|..+++|...... ...+..+|.++++.+..-.+ .+.++++.. .+...+|||+++|.+
T Consensus 6 ~~~i~~G~t~~~y~~---~~~~~VlR~~~~~~-~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~-~~~~glv~e~i~G~~ 80 (226)
T TIGR02172 6 WTQTGEGGNGESYTH---KTGKWMLKLYNPGF-DKETIKREFDASRKVFSLGIPTPHPFDLVED-GGRLGLIYELIVGKR 80 (226)
T ss_pred heeecCCCCcceeEe---cCCCEEEEeCCCCC-CHHHHHHHHHHHHHHHHcCCCCCceEEEEec-CCeeeeeeeecCCcc
Confidence 367999999999984 24567788775432 34567899999999864444 445554433 456789999999863
Q ss_pred -hhhh---------------------hhccCCCCCcCCCCCHHHHHH-HHH----------HHHH-Hhhhhcc-CCCCCe
Q 004248 617 -LSSS---------------------LYRKTNTEDDLQSLDWITRLK-IAI----------GAAE-GLSYLHH-ECTLPF 661 (766)
Q Consensus 617 -L~~~---------------------l~~~~~~~~~~~~l~~~~~~~-i~~----------~ia~-gL~yLH~-~~~~~i 661 (766)
+... ||.-.. . ......+.. +-. .+.. ..++|.. ...+.+
T Consensus 81 ~~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~---~--~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~ 155 (226)
T TIGR02172 81 SFSRIISDNPSRLEEIAKIFAEMAKKLHSTKC---D--TSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTC 155 (226)
T ss_pred chhhhhcCCHHHHHHHHHHHHHHHHHHhCCCC---C--CCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCce
Confidence 2111 111100 0 011111100 000 0000 1122211 113467
Q ss_pred EecCCCCCCeeeCCCCcEEeccchhhh
Q 004248 662 VHRDVQASSILLDDKFEVRLGSLSEVC 688 (766)
Q Consensus 662 iHrDlKp~NILl~~~~~~kl~DFG~a~ 688 (766)
+|+|+.|.||++++++ +.|.||+.+.
T Consensus 156 ~HgD~~~~Nii~~~~~-~~iIDwe~a~ 181 (226)
T TIGR02172 156 LHGDFQIGNLITSGKG-TYWIDLGDFG 181 (226)
T ss_pred EecCCCCCcEEEcCCC-cEEEechhcC
Confidence 8999999999999888 9999999875
No 498
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.28 E-value=3.2e-06 Score=95.27 Aligned_cols=139 Identities=17% Similarity=0.184 Sum_probs=93.3
Q ss_pred ceeecCCcceEEEEEEcCCcEEEEEEeeccccC-------------------------------HH----------HHHH
Q 004248 540 NLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVK-------------------------------TE----------AYLL 578 (766)
Q Consensus 540 ~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~-------------------------------~~----------~~~~ 578 (766)
+.|+.++-|.||+|++.+|+.||||+.+.+-.. .+ ++.+
T Consensus 131 ~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~ 210 (517)
T COG0661 131 EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRR 210 (517)
T ss_pred CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHHH
Confidence 679999999999999999999999998642110 00 2456
Q ss_pred HHHHHhhcC-----CCCcccceeEEEecCCcEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHH-hhh
Q 004248 579 ELDFFSKVS-----HARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEG-LSY 652 (766)
Q Consensus 579 E~~~l~~l~-----H~niv~l~~~~~~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~g-L~y 652 (766)
|..-+.+++ .|++ ++=..|++-.++..|+|||++|-.+.+...-+.. .++ +..++..++++ +..
T Consensus 211 EA~n~~~~~~nf~~~~~v-~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~~------g~d---~k~ia~~~~~~f~~q 280 (517)
T COG0661 211 EAANAERFRENFKDDPDV-YVPKVYWEYTTRRVLTMEWIDGIKISDIAALKSA------GID---RKELAELLVRAFLRQ 280 (517)
T ss_pred HHHHHHHHHHHcCCCCCe-EeceeehhccCCcEEEEEeeCCEecccHHHHHhc------CCC---HHHHHHHHHHHHHHH
Confidence 666666652 3433 2223344434567999999999888887422111 133 33344433332 122
Q ss_pred hccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcC
Q 004248 653 LHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQG 691 (766)
Q Consensus 653 LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~ 691 (766)
+-.+ ++.|.|..|.||+++.++++-+-|||+....+
T Consensus 281 ~~~d---gffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~ 316 (517)
T COG0661 281 LLRD---GFFHADPHPGNILVRSDGRIVLLDFGIVGRLD 316 (517)
T ss_pred HHhc---CccccCCCccceEEecCCcEEEEcCcceecCC
Confidence 2223 89999999999999999999999999986553
No 499
>PRK09902 hypothetical protein; Provisional
Probab=98.26 E-value=1.9e-05 Score=78.08 Aligned_cols=155 Identities=10% Similarity=0.081 Sum_probs=108.9
Q ss_pred cHHHHHHHhCCCCccceeecCCcceEEEEEEcCCcEEEEEEeecc-------ccCHHHHHHHHHHHhhcCC--CCcccce
Q 004248 525 TYQQLLAATGDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQ-------SVKTEAYLLELDFFSKVSH--ARLVPLL 595 (766)
Q Consensus 525 ~~~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~-------~~~~~~~~~E~~~l~~l~H--~niv~l~ 595 (766)
+++.+-....+..+.-=-|+||-+-|++-..++. .+-+|+-... ...+..|.+|...+.++.. -.+.+..
T Consensus 9 ~f~~~w~~~~~wve~pN~~rgG~SgV~r~~~~g~-~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv 87 (216)
T PRK09902 9 EFNHWWATEGDWVEEPNYRRNGMSGVQCVERNGK-KLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV 87 (216)
T ss_pred hHHHHHhCCCceecCCCcCCCCcceEEEEEeCCc-EEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc
Confidence 3444544444443333346788888998766544 6888987411 1236789999999999853 2344444
Q ss_pred eEEEecC----CcEEEEEeeCCC-CChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCC
Q 004248 596 GHCMERE----NEKFLVYKYMPN-GDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASS 670 (766)
Q Consensus 596 ~~~~~~~----~~~~lV~Ey~~~-GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~N 670 (766)
++.... -..+||+|-+++ -||.+++.+..- ...+...+..+..+|++.++-||+. ++.|+|+-+.|
T Consensus 88 -f~~~~k~~~~~rA~LVTe~L~g~~~L~~~l~~~~~-----~~~~~~~k~~il~~va~~ia~LH~~---Gv~Hgdly~kh 158 (216)
T PRK09902 88 -FGEAVKIEGEWRALLVTEDMAGFISIADWYAQHAV-----SPYSDEVRQAMLKAVALAFKKMHSV---NRQHGCCYVRH 158 (216)
T ss_pred -eeeeeccCCceEEEEEEEeCCCCccHHHHHhcCCc-----CCcchHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHhh
Confidence 332111 136899998874 489888864321 2467778889999999999999998 99999999999
Q ss_pred eeeCCCCc--EEeccchhhhh
Q 004248 671 ILLDDKFE--VRLGSLSEVCA 689 (766)
Q Consensus 671 ILl~~~~~--~kl~DFG~a~~ 689 (766)
|+++.++. +++.||--++.
T Consensus 159 Ill~~~g~~~v~lIDlEk~r~ 179 (216)
T PRK09902 159 IYVKTEGKAEAGFLDLEKSRR 179 (216)
T ss_pred eeecCCCCeeEEEEEhhccch
Confidence 99986666 99999986653
No 500
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=98.22 E-value=3.3e-07 Score=101.41 Aligned_cols=182 Identities=13% Similarity=-0.006 Sum_probs=127.4
Q ss_pred CccceeecCCcceEEEEEEcCCcEEEEEEeeccccCHHHHHHHHHHHhhcCCCC-cccceeEEEecCCcEEEEEeeCCCC
Q 004248 537 SDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHAR-LVPLLGHCMERENEKFLVYKYMPNG 615 (766)
Q Consensus 537 ~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~H~n-iv~l~~~~~~~~~~~~lV~Ey~~~G 615 (766)
...+-.++|+++++||.+-...+....|.+... ....-++++|.+++||| .|+.++-+. .+...+++++|+.+|
T Consensus 245 ~~fh~fvK~altknpKkRptaeklL~h~fvs~~----l~~rl~~eLLdK~n~P~~~v~~~~d~~-~E~~~~i~~~i~s~~ 319 (829)
T KOG0576|consen 245 EFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQT----LSRRLAIELLDKVNNPNPVVRYLEDYD-GEDYLWIPMRICSTG 319 (829)
T ss_pred HHHHHHHHHHhcCCCccCCChhhheeceeeccc----hhhHHHHHHHHHccCCCCcccccccCC-cccccchhhhhhcCC
Confidence 334557899999999987322233336655432 44566899999999999 666555343 255789999999987
Q ss_pred -ChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcCCC-
Q 004248 616 -DLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGD- 693 (766)
Q Consensus 616 -sL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~~~- 693 (766)
+-...... ....+...+...+.+.-.++++|+|+. .=+||| ||+..+ +..|..||+.+..+...
T Consensus 320 rs~~~~~~~------se~~~~~~~~~~~~r~et~~l~~l~~~---~~~~~d----~~l~s~-~~~~~~~~~v~~~L~~~~ 385 (829)
T KOG0576|consen 320 RSSALEMTV------SEIALEQYQFAYPLRKETRPLAELHSS---YKVHRD----NILGSE-EEVKLLDFAVPPQLTRTM 385 (829)
T ss_pred ccccccCCh------hhHhhhhhhhhhhhhhhcccccccccc---cccCcc----cccccc-cccccccccCCcccCccc
Confidence 22211111 112344555566677788999999985 358999 887765 68899999998776544
Q ss_pred -CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCC
Q 004248 694 -AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLN 746 (766)
Q Consensus 694 -~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~ 746 (766)
.....+++..++||...... +..+.|+|+.|+-..+|.-|-+|-
T Consensus 386 ~~~t~~~~~~~~~pev~~~~~---------~~~~p~~~~~~~~~~~~ap~~pPr 430 (829)
T KOG0576|consen 386 KPRTAIGTPEPLAPEVIQENT---------IDGCPDSGSLAVSAIQMAPGLPPR 430 (829)
T ss_pred ccccCCCCCCCCCchhhcccc---------cccCCCccCCCcchhhcCCCCCCC
Confidence 45567888999999776555 467889999999888888887764
Done!