Query 004248
Match_columns 766
No_of_seqs 949 out of 6005
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 19:03:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004248.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004248hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3omv_A RAF proto-oncogene seri 100.0 1.1E-47 3.7E-52 406.5 12.9 197 534-749 36-240 (307)
2 4b9d_A Serine/threonine-protei 100.0 9.9E-48 3.4E-52 412.5 11.6 198 534-749 24-228 (350)
3 4fih_A Serine/threonine-protei 100.0 1.9E-47 6.5E-52 409.7 13.4 195 534-749 74-273 (346)
4 4aw0_A HPDK1, 3-phosphoinositi 100.0 1.7E-47 5.8E-52 404.0 10.7 196 534-749 32-237 (311)
5 4asz_A BDNF/NT-3 growth factor 100.0 2.4E-47 8.2E-52 403.6 10.9 203 534-749 13-234 (299)
6 3fpq_A Serine/threonine-protei 100.0 1.1E-46 3.7E-51 395.9 15.3 195 537-749 29-232 (290)
7 4aoj_A High affinity nerve gro 100.0 9.1E-47 3.1E-51 404.7 13.2 203 534-749 41-264 (329)
8 3hyh_A Carbon catabolite-derep 100.0 1.5E-46 5.2E-51 391.4 14.3 197 533-749 12-215 (275)
9 4gt4_A Tyrosine-protein kinase 100.0 7.4E-47 2.5E-51 401.6 12.2 201 536-749 28-251 (308)
10 4fie_A Serine/threonine-protei 100.0 2E-46 6.8E-51 411.6 14.9 195 534-749 151-350 (423)
11 3ubd_A Ribosomal protein S6 ki 100.0 8.9E-47 3E-51 398.5 7.6 196 534-749 24-229 (304)
12 4g3f_A NF-kappa-beta-inducing 100.0 3.7E-46 1.3E-50 398.5 12.3 192 534-749 58-259 (336)
13 3hmm_A TGF-beta receptor type- 100.0 6E-46 2E-50 395.1 12.4 202 534-747 3-219 (303)
14 3rgz_A Protein brassinosteroid 100.0 3.5E-45 1.2E-49 439.1 19.9 349 44-401 7-388 (768)
15 4ase_A Vascular endothelial gr 100.0 5E-45 1.7E-49 394.3 10.2 215 524-750 54-292 (353)
16 4g31_A Eukaryotic translation 100.0 2.7E-44 9.3E-49 380.8 12.3 195 534-747 5-228 (299)
17 4eco_A Uncharacterized protein 100.0 1E-42 3.5E-47 408.6 22.2 352 48-417 29-529 (636)
18 4ecn_A Leucine-rich repeat pro 100.0 2.5E-42 8.7E-47 413.1 24.6 352 46-416 266-768 (876)
19 4b99_A Mitogen-activated prote 100.0 2.2E-43 7.5E-48 388.0 13.7 196 534-748 54-265 (398)
20 1ogq_A PGIP-2, polygalacturona 100.0 1.2E-42 4E-47 372.4 17.2 289 45-371 2-302 (313)
21 4f9c_A Cell division cycle 7-r 100.0 1.8E-43 6.2E-48 384.5 10.8 205 531-758 18-259 (361)
22 3v5w_A G-protein coupled recep 100.0 1E-42 3.5E-47 398.6 13.1 197 534-749 189-394 (689)
23 3uto_A Twitchin; kinase, muscl 100.0 9.4E-41 3.2E-45 384.7 12.3 197 534-749 157-359 (573)
24 3rgz_A Protein brassinosteroid 100.0 8.5E-39 2.9E-43 383.7 22.2 288 112-400 338-723 (768)
25 3fe3_A MAP/microtubule affinit 100.0 2E-38 6.9E-43 341.6 13.7 199 533-750 14-218 (328)
26 1o6l_A RAC-beta serine/threoni 100.0 6.9E-38 2.4E-42 338.5 15.9 196 534-749 5-208 (337)
27 4aw2_A Serine/threonine-protei 100.0 1.1E-38 3.8E-43 356.0 9.4 211 525-749 65-284 (437)
28 1fot_A TPK1 delta, CAMP-depend 100.0 5.4E-38 1.8E-42 336.8 13.4 196 534-749 6-206 (318)
29 3zgw_A Maternal embryonic leuc 100.0 5.5E-38 1.9E-42 340.4 12.8 198 533-749 9-213 (347)
30 3fxz_A Serine/threonine-protei 100.0 1.4E-37 4.6E-42 330.5 15.6 196 533-749 19-219 (297)
31 3uim_A Brassinosteroid insensi 100.0 5.6E-38 1.9E-42 337.8 12.1 213 522-747 18-236 (326)
32 2c30_A Serine/threonine-protei 100.0 2.1E-37 7.3E-42 332.8 16.5 207 522-749 23-244 (321)
33 3v8s_A RHO-associated protein 100.0 3.2E-38 1.1E-42 349.6 10.2 206 526-749 61-276 (410)
34 4fr4_A YANK1, serine/threonine 100.0 1.4E-37 4.7E-42 341.5 14.9 198 534-748 15-219 (384)
35 1rdq_E PKA C-alpha, CAMP-depen 100.0 1.1E-37 3.8E-42 338.8 13.5 196 534-749 41-241 (350)
36 3txo_A PKC-L, NPKC-ETA, protei 100.0 6.1E-38 2.1E-42 341.2 11.1 197 533-749 22-227 (353)
37 2vd5_A DMPK protein; serine/th 100.0 4.8E-38 1.6E-42 348.4 10.4 211 525-749 52-273 (412)
38 2qkw_B Protein kinase; three-h 100.0 9E-38 3.1E-42 335.6 12.0 209 525-749 30-244 (321)
39 3v47_A TOLL-like receptor 5B a 100.0 1.6E-36 5.4E-41 341.9 22.3 313 77-398 9-412 (455)
40 1xjd_A Protein kinase C, theta 100.0 1.8E-37 6.2E-42 336.2 13.9 198 532-749 15-221 (345)
41 4dc2_A Protein kinase C IOTA t 100.0 1.2E-37 4E-42 343.3 12.2 196 533-748 51-255 (396)
42 3a8x_A Protein kinase C IOTA t 100.0 2.8E-37 9.4E-42 335.1 13.6 195 534-748 9-212 (345)
43 3s95_A LIMK-1, LIM domain kina 100.0 6.3E-37 2.2E-41 327.2 15.3 197 534-749 10-225 (310)
44 1tki_A Titin; serine kinase, m 100.0 3.9E-37 1.4E-41 330.7 13.7 198 533-749 4-206 (321)
45 3soc_A Activin receptor type-2 100.0 2.5E-37 8.6E-42 332.4 11.9 202 534-748 24-240 (322)
46 2yab_A Death-associated protei 100.0 5.7E-37 2E-41 334.4 14.8 197 533-749 11-221 (361)
47 3e7e_A HBUB1, BUB1A, mitotic c 100.0 1.4E-37 4.6E-42 340.5 9.5 201 533-750 64-289 (365)
48 3h4j_B AMPK kdaid, SNF1-like p 100.0 4.1E-37 1.4E-41 332.2 12.7 197 533-749 8-211 (336)
49 2i0e_A Protein kinase C-beta I 100.0 4.1E-37 1.4E-41 334.5 12.7 198 532-749 18-224 (353)
50 3niz_A Rhodanese family protei 100.0 7E-37 2.4E-41 327.3 14.1 197 533-748 20-222 (311)
51 2zv2_A Calcium/calmodulin-depe 100.0 9.6E-37 3.3E-41 323.9 15.1 200 533-749 12-243 (298)
52 3tki_A Serine/threonine-protei 100.0 2.8E-37 9.6E-42 332.1 11.0 199 533-750 6-212 (323)
53 4eqm_A Protein kinase; transfe 100.0 5.8E-37 2E-41 325.1 13.0 197 534-750 11-216 (294)
54 3o0g_A Cell division protein k 100.0 9E-37 3.1E-41 323.1 13.0 200 534-752 2-208 (292)
55 2bdw_A Hypothetical protein K1 100.0 9.8E-37 3.4E-41 333.1 13.5 197 533-749 28-233 (362)
56 2r5t_A Serine/threonine-protei 100.0 5.5E-37 1.9E-41 335.9 11.4 196 534-749 38-242 (373)
57 3uc3_A Serine/threonine-protei 100.0 7.8E-37 2.7E-41 333.8 12.1 198 533-749 19-221 (361)
58 3p86_A Serine/threonine-protei 100.0 8.3E-37 2.8E-41 326.4 12.0 199 533-749 36-242 (309)
59 1ob3_A PFPK5, cell division co 100.0 1.1E-36 3.8E-41 321.8 12.7 196 534-748 2-203 (288)
60 2pmi_A Negative RE, cyclin-dep 100.0 1.7E-36 5.8E-41 325.1 14.2 203 533-749 4-212 (317)
61 3a62_A Ribosomal protein S6 ki 100.0 1E-36 3.5E-41 328.4 12.4 196 534-749 17-224 (327)
62 2acx_A G protein-coupled recep 100.0 1.1E-36 3.7E-41 348.2 12.8 199 533-749 183-388 (576)
63 2y0a_A Death-associated protei 100.0 2.8E-36 9.5E-41 324.8 15.2 196 534-749 11-220 (326)
64 2psq_A Fibroblast growth facto 100.0 1.5E-36 5.2E-41 332.7 13.1 203 534-749 81-309 (370)
65 4hcu_A Tyrosine-protein kinase 100.0 1.5E-36 5E-41 317.4 12.1 197 534-749 10-211 (269)
66 3c0i_A Peripheral plasma membr 100.0 2E-36 6.8E-41 329.4 13.2 199 534-748 24-235 (351)
67 3soa_A Calcium/calmodulin-depe 100.0 2.2E-36 7.5E-41 338.6 13.8 197 533-749 10-216 (444)
68 1k9a_A Carboxyl-terminal SRC k 100.0 2.3E-36 7.9E-41 340.0 13.8 198 533-749 192-390 (450)
69 3qd2_B Eukaryotic translation 100.0 3.4E-36 1.2E-40 324.0 14.3 198 533-746 5-276 (332)
70 4euu_A Serine/threonine-protei 100.0 1E-36 3.6E-41 327.0 10.1 209 534-750 9-227 (319)
71 2y94_A 5'-AMP-activated protei 100.0 2.6E-36 8.9E-41 340.2 13.5 197 534-749 16-219 (476)
72 1cm8_A Phosphorylated MAP kina 100.0 2.8E-36 9.4E-41 330.3 13.0 197 533-749 24-229 (367)
73 3c4z_A Rhodopsin kinase; Ser/T 100.0 3.3E-36 1.1E-40 343.4 14.0 200 534-749 185-392 (543)
74 3llt_A Serine/threonine kinase 100.0 4.2E-36 1.4E-40 327.9 14.2 206 525-749 26-262 (360)
75 2nru_A Interleukin-1 receptor- 100.0 1.1E-35 3.7E-40 317.0 17.0 210 522-750 13-238 (307)
76 3oz6_A Mitogen-activated prote 100.0 3.4E-36 1.2E-40 332.1 13.6 198 532-749 7-234 (388)
77 4ejn_A RAC-alpha serine/threon 100.0 8E-37 2.7E-41 343.5 8.6 197 533-749 147-352 (446)
78 3l9p_A Anaplastic lymphoma kin 100.0 2.1E-36 7.2E-41 331.2 11.7 203 534-749 71-290 (367)
79 1kob_A Twitchin; kinase, intra 100.0 4.8E-36 1.6E-40 330.1 13.9 198 533-749 50-253 (387)
80 3sxs_A Cytoplasmic tyrosine-pr 100.0 4.3E-36 1.5E-40 313.6 12.8 197 534-749 8-209 (268)
81 3gni_B Strad alpha; kinase fol 100.0 6.5E-36 2.2E-40 330.0 14.8 201 534-750 25-241 (389)
82 2x4f_A Myosin light chain kina 100.0 3.3E-36 1.1E-40 330.3 12.3 194 537-749 92-291 (373)
83 2w4o_A Calcium/calmodulin-depe 100.0 3.1E-36 1.1E-40 327.6 11.9 197 533-750 52-254 (349)
84 3rp9_A Mitogen-activated prote 100.0 3E-36 1E-40 340.1 12.2 190 534-742 53-280 (458)
85 3n9x_A Phosphotransferase; mal 100.0 4.1E-36 1.4E-40 336.2 13.1 195 533-746 25-252 (432)
86 3i6u_A CDS1, serine/threonine- 100.0 5.7E-36 1.9E-40 333.7 14.1 200 532-749 133-347 (419)
87 1qcf_A Haematopoetic cell kina 100.0 2.6E-36 8.9E-41 340.0 11.2 198 532-748 186-388 (454)
88 2qol_A Ephrin receptor; recept 100.0 3E-36 1E-40 330.7 11.2 197 534-749 45-254 (373)
89 3ttj_A Mitogen-activated prote 100.0 5.5E-36 1.9E-40 337.7 13.6 195 533-749 61-266 (464)
90 3g33_A Cell division protein k 100.0 1.1E-35 3.7E-40 317.3 15.1 200 532-749 7-222 (308)
91 3q4u_A Activin receptor type-1 100.0 4.2E-36 1.4E-40 318.9 11.9 200 533-749 7-236 (301)
92 3kul_A Ephrin type-A receptor 100.0 4.6E-36 1.6E-40 323.0 12.0 197 534-749 49-258 (325)
93 3ork_A Serine/threonine protei 100.0 1.4E-36 4.9E-41 324.8 8.0 199 533-750 11-223 (311)
94 3gen_A Tyrosine-protein kinase 100.0 4.9E-36 1.7E-40 315.7 11.7 198 533-749 23-225 (283)
95 3vhe_A Vascular endothelial gr 100.0 1.8E-36 6.1E-41 330.5 8.6 215 524-750 12-300 (359)
96 4f0f_A Serine/threonine-protei 100.0 1.5E-35 5.2E-40 312.7 15.4 198 534-750 19-232 (287)
97 2izr_A Casein kinase I isoform 100.0 5.5E-36 1.9E-40 323.0 12.1 195 534-749 9-220 (330)
98 1u5q_A Serine/threonine protei 100.0 7.8E-36 2.7E-40 324.2 12.8 198 534-749 54-256 (348)
99 3cbl_A C-FES, proto-oncogene t 100.0 2.4E-36 8.3E-41 332.0 8.9 196 534-748 114-318 (377)
100 1nxk_A MAP kinase-activated pr 100.0 9.5E-36 3.2E-40 329.7 13.3 195 534-749 61-266 (400)
101 3lb7_A RAF proto-oncogene seri 100.0 1.2E-35 4.1E-40 317.1 13.6 197 534-749 36-240 (307)
102 3pfq_A PKC-B, PKC-beta, protei 100.0 1.1E-35 3.6E-40 349.9 14.3 198 532-749 339-545 (674)
103 3kn6_A Ribosomal protein S6 ki 100.0 2E-35 7E-40 317.9 15.4 189 539-749 16-212 (325)
104 2eue_A Carbon catabolite derep 100.0 1.2E-35 4E-40 311.6 13.1 196 534-749 13-215 (275)
105 3dls_A PAS domain-containing s 100.0 5.2E-36 1.8E-40 323.9 10.3 198 532-748 22-232 (335)
106 1opk_A P150, C-ABL, proto-onco 100.0 7E-36 2.4E-40 339.9 11.6 199 533-749 219-423 (495)
107 3byv_A Rhoptry kinase; malaria 100.0 6.1E-37 2.1E-41 336.8 2.7 211 533-748 72-315 (377)
108 3kmu_A ILK, integrin-linked ki 100.0 8.1E-36 2.8E-40 311.4 10.9 201 534-749 10-214 (271)
109 4agu_A Cyclin-dependent kinase 100.0 1.4E-35 4.8E-40 316.7 13.0 197 534-749 3-206 (311)
110 3p1a_A MYT1 kinase, membrane-a 100.0 1.8E-35 6.3E-40 316.2 13.2 193 534-747 57-256 (311)
111 2fst_X Mitogen-activated prote 100.0 9.9E-36 3.4E-40 325.7 11.0 197 533-749 28-233 (367)
112 2yex_A Serine/threonine-protei 100.0 2.7E-35 9.2E-40 308.6 13.6 199 533-750 6-212 (276)
113 3f3z_A Calcium/calmodulin-depe 100.0 2.4E-35 8.3E-40 309.4 13.3 195 534-749 9-210 (277)
114 1vzo_A Ribosomal protein S6 ki 100.0 6.7E-36 2.3E-40 325.7 9.3 197 534-748 54-264 (355)
115 3fdn_A Serine/threonine-protei 100.0 1.6E-35 5.4E-40 311.3 11.8 197 533-749 8-210 (279)
116 2a2a_A Death-associated protei 100.0 2.4E-35 8.3E-40 316.7 13.4 195 534-748 12-220 (321)
117 3poz_A Epidermal growth factor 100.0 8.7E-36 3E-40 321.1 9.8 196 534-749 15-223 (327)
118 3gbz_A Kinase, CMGC CDK; ssgci 100.0 1.2E-35 4E-40 320.4 10.8 198 532-749 32-241 (329)
119 3cok_A Serine/threonine-protei 100.0 3.5E-35 1.2E-39 308.4 14.1 198 533-749 10-215 (278)
120 2ac3_A MAP kinase-interacting 100.0 2.2E-35 7.5E-40 315.9 12.8 201 534-749 12-229 (316)
121 1luf_A Muscle-specific tyrosin 100.0 1.5E-35 5E-40 321.0 11.2 205 532-749 45-280 (343)
122 3kk8_A Calcium/calmodulin depe 100.0 4.4E-35 1.5E-39 308.5 14.5 197 533-749 5-210 (284)
123 2eva_A TAK1 kinase - TAB1 chim 100.0 1.6E-35 5.6E-40 316.0 11.3 197 534-748 8-205 (307)
124 3ugc_A Tyrosine-protein kinase 100.0 6.7E-36 2.3E-40 316.8 8.2 196 534-747 10-218 (295)
125 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 9.2E-36 3.1E-40 335.3 9.4 197 533-748 183-384 (452)
126 3kvw_A DYRK2, dual specificity 100.0 2.5E-35 8.6E-40 329.4 12.9 198 533-749 96-302 (429)
127 3mtl_A Cell division protein k 100.0 8.1E-36 2.8E-40 320.9 8.5 197 534-749 2-204 (324)
128 3is5_A Calcium-dependent prote 100.0 1.7E-35 5.7E-40 312.3 10.7 199 534-749 22-228 (285)
129 3t9t_A Tyrosine-protein kinase 100.0 2.1E-35 7E-40 308.0 11.0 197 534-749 8-209 (267)
130 3pg1_A Mitogen-activated prote 100.0 5.3E-35 1.8E-39 319.3 14.3 208 524-749 12-237 (362)
131 3eb0_A Putative uncharacterize 100.0 2.2E-35 7.6E-40 325.1 11.2 201 531-749 4-245 (383)
132 3c1x_A Hepatocyte growth facto 100.0 2.2E-35 7.5E-40 323.6 10.9 195 536-748 91-299 (373)
133 4eut_A Serine/threonine-protei 100.0 5.5E-36 1.9E-40 331.4 6.0 208 534-749 9-226 (396)
134 3kex_A Receptor tyrosine-prote 100.0 1.8E-35 6.1E-40 318.4 9.7 197 534-750 13-222 (325)
135 1t4h_A Serine/threonine-protei 100.0 1.1E-34 3.7E-39 306.7 15.5 196 535-748 27-231 (290)
136 3op5_A Serine/threonine-protei 100.0 2E-35 6.9E-40 323.1 10.2 197 533-748 34-263 (364)
137 3eqc_A Dual specificity mitoge 100.0 2E-35 6.8E-40 322.5 10.1 198 534-750 33-234 (360)
138 2vgo_A Serine/threonine-protei 100.0 5E-35 1.7E-39 308.3 12.8 196 534-749 14-215 (284)
139 4eco_A Uncharacterized protein 100.0 9.8E-35 3.3E-39 340.8 16.6 284 110-402 199-533 (636)
140 1qpc_A LCK kinase; alpha beta 100.0 2.7E-35 9.1E-40 309.5 10.6 196 534-748 13-213 (279)
141 2qr7_A Ribosomal protein S6 ki 100.0 2E-35 6.8E-40 320.1 9.9 193 533-748 21-222 (342)
142 3mi9_A Cell division protein k 100.0 5.3E-35 1.8E-39 318.0 13.3 198 534-749 17-232 (351)
143 4aaa_A Cyclin-dependent kinase 100.0 3.9E-35 1.3E-39 316.5 11.9 197 534-749 25-228 (331)
144 3dbq_A Dual specificity protei 100.0 2.3E-35 7.9E-40 320.0 10.2 202 534-748 9-222 (343)
145 2jam_A Calcium/calmodulin-depe 100.0 6.9E-35 2.4E-39 310.5 13.7 196 534-749 9-210 (304)
146 3hko_A Calcium/calmodulin-depe 100.0 2E-35 6.8E-40 320.3 9.7 210 529-749 21-279 (345)
147 3tt0_A Basic fibroblast growth 100.0 4.8E-35 1.7E-39 322.3 12.7 203 534-749 69-297 (382)
148 2y7j_A Phosphorylase B kinase 100.0 8.1E-35 2.8E-39 318.4 14.4 208 527-748 87-307 (365)
149 1mp8_A Focal adhesion kinase 1 100.0 3E-35 1E-39 309.6 10.4 196 534-749 15-221 (281)
150 3mwu_A Calmodulin-domain prote 100.0 5.8E-35 2E-39 332.1 13.5 195 534-749 22-225 (486)
151 2x7f_A TRAF2 and NCK-interacti 100.0 1.8E-35 6E-40 318.1 8.5 210 528-749 18-237 (326)
152 2rku_A Serine/threonine-protei 100.0 9E-35 3.1E-39 307.9 13.8 196 534-749 15-218 (294)
153 2zmd_A Dual specificity protei 100.0 4.1E-35 1.4E-39 323.6 11.6 202 534-748 56-269 (390)
154 3dtc_A Mitogen-activated prote 100.0 3.6E-35 1.2E-39 307.0 10.5 197 534-749 7-217 (271)
155 2h6d_A 5'-AMP-activated protei 100.0 1E-34 3.5E-39 304.3 14.1 197 534-749 11-214 (276)
156 3bhy_A Death-associated protei 100.0 7.8E-35 2.7E-39 306.4 13.2 196 534-749 5-214 (283)
157 1ua2_A CAK, cell division prot 100.0 4.4E-35 1.5E-39 318.1 11.6 199 531-748 7-215 (346)
158 4fvq_A Tyrosine-protein kinase 100.0 2E-35 6.8E-40 312.0 8.4 195 534-747 8-219 (289)
159 3nsz_A CK II alpha, casein kin 100.0 7.2E-35 2.5E-39 313.9 12.9 196 534-752 36-237 (330)
160 1byg_A CSK, protein (C-termina 100.0 1.6E-35 5.4E-40 311.1 7.6 197 534-749 21-218 (278)
161 1rjb_A FL cytokine receptor; k 100.0 6.4E-35 2.2E-39 316.3 12.6 206 532-750 43-279 (344)
162 2h34_A Serine/threonine-protei 100.0 1.1E-34 3.8E-39 309.8 14.2 197 533-749 33-238 (309)
163 2ivs_A Proto-oncogene tyrosine 100.0 5.3E-35 1.8E-39 312.4 11.7 204 533-749 22-256 (314)
164 3q5i_A Protein kinase; CDPK, m 100.0 9.2E-35 3.1E-39 331.9 14.4 196 533-749 35-250 (504)
165 3gxj_A TGF-beta receptor type- 100.0 7.9E-36 2.7E-40 317.0 5.1 192 534-742 3-214 (303)
166 2owb_A Serine/threonine-protei 100.0 8.5E-35 2.9E-39 314.4 13.2 196 534-749 41-244 (335)
167 1x8b_A WEE1HU, WEE1-like prote 100.0 9.4E-35 3.2E-39 306.0 13.1 199 533-747 10-232 (289)
168 1j1b_A Glycogen synthase kinas 100.0 3.8E-35 1.3E-39 327.1 10.5 196 535-748 55-259 (420)
169 1t46_A HOMO sapiens V-KIT hard 100.0 5.5E-35 1.9E-39 312.2 11.3 204 534-750 23-252 (313)
170 1csn_A Casein kinase-1; phosph 100.0 1.4E-34 4.8E-39 306.7 14.3 195 534-749 10-221 (298)
171 3kfa_A Tyrosine-protein kinase 100.0 3.7E-35 1.3E-39 309.7 9.8 200 533-750 12-217 (288)
172 2pml_X PFPK7, Ser/Thr protein 100.0 1E-34 3.4E-39 315.2 13.3 200 533-750 30-256 (348)
173 4fcg_A Uncharacterized protein 100.0 4.6E-34 1.6E-38 307.7 18.3 275 45-348 23-314 (328)
174 3g2f_A Bone morphogenetic prot 100.0 4.2E-35 1.4E-39 316.6 10.2 205 534-751 13-240 (336)
175 2h8h_A Proto-oncogene tyrosine 100.0 3E-35 1E-39 337.8 9.6 197 533-748 266-467 (535)
176 3nyv_A Calmodulin-domain prote 100.0 4.8E-35 1.6E-39 332.7 11.1 195 534-749 26-230 (484)
177 3q60_A ROP5B; pseudokinase, tr 100.0 2.3E-35 7.9E-40 323.5 8.1 199 534-749 62-296 (371)
178 2w5a_A Serine/threonine-protei 100.0 3.9E-35 1.4E-39 308.0 9.4 205 533-749 5-219 (279)
179 2r3i_A Cell division protein k 100.0 1.2E-34 3.9E-39 307.7 13.1 198 534-749 3-207 (299)
180 3lij_A Calcium/calmodulin depe 100.0 1.1E-34 3.6E-39 330.5 13.7 195 534-749 37-240 (494)
181 4hgt_A Casein kinase I isoform 100.0 1.3E-34 4.6E-39 306.4 13.6 198 532-749 7-218 (296)
182 3qyz_A Mitogen-activated prote 100.0 8.9E-35 3.1E-39 318.0 12.5 197 533-749 26-235 (364)
183 2buj_A Serine/threonine-protei 100.0 8.3E-35 2.8E-39 311.6 11.6 202 534-747 29-247 (317)
184 1wak_A Serine/threonine-protei 100.0 5.5E-35 1.9E-39 322.8 10.4 199 534-749 37-296 (397)
185 2xrw_A Mitogen-activated prote 100.0 1.2E-34 4.1E-39 317.8 12.8 195 533-749 24-229 (371)
186 3qup_A Tyrosine-protein kinase 100.0 7.8E-35 2.7E-39 312.8 11.0 205 532-749 21-243 (323)
187 3og7_A AKAP9-BRAF fusion prote 100.0 7.9E-35 2.7E-39 307.8 10.8 198 533-749 23-228 (289)
188 3f66_A Hepatocyte growth facto 100.0 1E-34 3.4E-39 308.1 11.7 195 534-746 25-232 (298)
189 3e3p_A Protein kinase, putativ 100.0 1.5E-34 5.2E-39 315.3 13.1 208 527-749 16-235 (360)
190 4e5w_A Tyrosine-protein kinase 100.0 7.5E-35 2.6E-39 309.6 10.3 195 534-746 21-229 (302)
191 3a7i_A MST3 kinase, serine/thr 100.0 2.8E-34 9.6E-39 305.5 14.7 195 534-749 22-222 (303)
192 3lm5_A Serine/threonine-protei 100.0 1.2E-34 4.1E-39 312.2 11.8 200 532-749 26-236 (327)
193 4exu_A Mitogen-activated prote 100.0 1.3E-34 4.6E-39 317.4 12.3 196 533-749 41-245 (371)
194 2xir_A Vascular endothelial gr 100.0 6.4E-35 2.2E-39 312.1 9.5 215 524-750 17-255 (316)
195 3uzp_A CKI-delta, CKID, casein 100.0 2.3E-34 7.8E-39 304.8 13.6 197 533-749 8-218 (296)
196 2pvf_A Fibroblast growth facto 100.0 1.8E-34 6E-39 311.7 12.8 203 534-749 35-263 (334)
197 4e7w_A Glycogen synthase kinas 100.0 1E-34 3.5E-39 320.9 10.9 198 534-749 40-245 (394)
198 2id5_A Lingo-1, leucine rich r 100.0 7.1E-33 2.4E-37 314.1 26.0 281 117-400 32-315 (477)
199 3lzb_A Epidermal growth factor 100.0 1.4E-34 4.6E-39 311.8 11.2 196 534-749 15-223 (327)
200 1z57_A Dual specificity protei 100.0 2E-34 6.8E-39 311.0 12.4 197 534-749 14-237 (339)
201 3pls_A Macrophage-stimulating 100.0 3.1E-34 1.1E-38 304.0 13.6 195 536-748 23-230 (298)
202 2clq_A Mitogen-activated prote 100.0 3E-34 1E-38 303.8 13.4 200 534-748 22-227 (295)
203 3lxl_A Tyrosine-protein kinase 100.0 1E-34 3.4E-39 312.6 9.9 197 534-748 23-232 (327)
204 2j7t_A Serine/threonine-protei 100.0 8.5E-35 2.9E-39 309.1 9.2 203 533-749 18-225 (302)
205 3lxp_A Non-receptor tyrosine-p 100.0 2.6E-34 9E-39 308.2 13.1 193 536-748 33-239 (318)
206 2a19_B Interferon-induced, dou 100.0 1.2E-34 4.2E-39 304.8 10.1 194 534-747 11-222 (284)
207 1ogq_A PGIP-2, polygalacturona 100.0 2.1E-34 7.3E-39 308.2 12.1 250 142-395 50-306 (313)
208 2jii_A Serine/threonine-protei 100.0 4E-35 1.4E-39 319.2 6.5 195 534-750 42-272 (352)
209 2v62_A Serine/threonine-protei 100.0 7.5E-35 2.6E-39 316.2 8.6 195 534-748 37-262 (345)
210 3cc6_A Protein tyrosine kinase 100.0 1.7E-34 5.6E-39 303.8 10.9 196 533-748 11-217 (281)
211 3ll6_A Cyclin G-associated kin 100.0 2.7E-34 9.3E-39 309.8 12.8 201 534-748 28-255 (337)
212 2ycf_A Serine/threonine-protei 100.0 6.6E-35 2.3E-39 313.3 7.9 199 534-750 10-223 (322)
213 2ozo_A Tyrosine-protein kinase 100.0 1.9E-34 6.5E-39 336.0 12.3 189 541-749 343-543 (613)
214 2vx3_A Dual specificity tyrosi 100.0 2.9E-34 9.9E-39 316.1 13.1 201 532-749 52-261 (382)
215 2vwi_A Serine/threonine-protei 100.0 8.9E-35 3.1E-39 308.9 8.5 205 533-749 14-230 (303)
216 1fvr_A Tyrosine-protein kinase 100.0 2.1E-34 7.2E-39 310.1 11.4 203 534-749 25-245 (327)
217 1phk_A Phosphorylase kinase; g 100.0 4.4E-34 1.5E-38 303.1 13.7 201 533-748 16-231 (298)
218 2yfx_A Tyrosine-protein kinase 100.0 2.5E-34 8.6E-39 309.5 12.0 203 534-749 30-249 (327)
219 3mdy_A Bone morphogenetic prot 100.0 3.8E-34 1.3E-38 309.0 13.4 197 532-742 35-248 (337)
220 3coi_A Mitogen-activated prote 100.0 2.8E-34 9.4E-39 312.7 12.4 197 533-750 23-228 (353)
221 3vq2_A TLR4, TOLL-like recepto 100.0 7.8E-33 2.7E-37 323.3 25.5 303 87-401 33-493 (606)
222 1u59_A Tyrosine-protein kinase 100.0 2.9E-34 9.9E-39 303.0 12.0 195 535-749 10-217 (287)
223 2wqm_A Serine/threonine-protei 100.0 2.6E-34 8.8E-39 306.8 11.6 200 534-749 32-239 (310)
224 1mqb_A Ephrin type-A receptor 100.0 3.3E-34 1.1E-38 309.6 12.5 196 534-748 44-253 (333)
225 3com_A Serine/threonine-protei 100.0 5.4E-34 1.9E-38 304.8 14.0 198 532-749 27-228 (314)
226 3an0_A Dual specificity mitoge 100.0 1.3E-34 4.3E-39 313.6 9.0 205 533-749 50-260 (340)
227 1p4o_A Insulin-like growth fac 100.0 7.9E-35 2.7E-39 312.5 7.3 207 530-749 21-244 (322)
228 2b9h_A MAP kinase FUS3, mitoge 100.0 3.3E-34 1.1E-38 311.8 12.0 197 533-749 10-226 (353)
229 3v47_A TOLL-like receptor 5B a 100.0 2.4E-33 8.2E-38 315.8 19.5 276 117-395 30-385 (455)
230 4fl3_A Tyrosine-protein kinase 100.0 2.9E-34 9.8E-39 335.4 12.3 189 540-749 375-576 (635)
231 2wtk_C Serine/threonine-protei 100.0 9.8E-34 3.4E-38 301.4 15.0 201 533-749 4-216 (305)
232 3rgf_A Cyclin-dependent kinase 100.0 3.7E-34 1.3E-38 317.7 12.2 201 536-749 22-239 (405)
233 2i1m_A Macrophage colony-stimu 100.0 2.1E-34 7.2E-39 310.8 9.8 205 532-749 44-270 (333)
234 2i6l_A Mitogen-activated prote 100.0 4.3E-34 1.5E-38 305.9 11.6 196 534-749 11-228 (320)
235 3brb_A Proto-oncogene tyrosine 100.0 7.5E-34 2.6E-38 303.7 13.4 205 532-749 32-253 (313)
236 1b6c_B TGF-B superfamily recep 100.0 9.2E-34 3.1E-38 306.7 14.2 201 532-749 40-270 (342)
237 3fme_A Dual specificity mitoge 100.0 2E-34 6.9E-39 304.3 8.8 204 533-748 6-215 (290)
238 1zy4_A Serine/threonine-protei 100.0 3.3E-34 1.1E-38 304.1 10.3 192 533-741 5-226 (303)
239 1xbb_A Tyrosine-protein kinase 100.0 3.4E-34 1.2E-38 303.1 10.3 195 534-749 16-224 (291)
240 4ecn_A Leucine-rich repeat pro 100.0 4.4E-33 1.5E-37 333.3 21.1 285 110-402 441-773 (876)
241 2z7x_B TOLL-like receptor 1, v 100.0 2.2E-32 7.5E-37 313.5 25.9 298 86-401 21-440 (520)
242 2w1i_A JAK2; chromosomal rearr 100.0 4E-34 1.4E-38 307.9 10.3 196 534-747 41-249 (326)
243 2eu9_A Dual specificity protei 100.0 7.2E-34 2.5E-38 308.8 11.8 197 534-749 19-242 (355)
244 1blx_A Cyclin-dependent kinase 100.0 5.5E-34 1.9E-38 306.3 10.8 200 532-749 9-222 (326)
245 2z81_A CD282 antigen, TOLL-lik 100.0 5.5E-33 1.9E-37 320.6 19.6 164 76-248 4-182 (549)
246 2id5_A Lingo-1, leucine rich r 100.0 1.3E-32 4.5E-37 311.9 22.3 312 77-398 12-337 (477)
247 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 4.2E-32 1.4E-36 314.3 26.9 277 117-402 52-470 (562)
248 2z7x_B TOLL-like receptor 1, v 100.0 3.3E-32 1.1E-36 312.0 25.8 293 86-400 45-462 (520)
249 3sv0_A Casein kinase I-like; t 100.0 1.4E-33 4.7E-38 318.6 13.8 197 533-749 6-216 (483)
250 3oja_B Anopheles plasmodium-re 100.0 2.7E-32 9.1E-37 318.1 24.9 266 113-396 71-339 (597)
251 1q8y_A SR protein kinase; tran 100.0 5.3E-34 1.8E-38 312.5 9.3 199 534-749 19-238 (373)
252 2wei_A Calmodulin-domain prote 100.0 1.7E-33 5.7E-38 297.2 12.0 196 533-749 21-225 (287)
253 3o6n_A APL1; leucine-rich repe 100.0 7.1E-32 2.4E-36 297.8 25.5 271 116-396 44-333 (390)
254 3a99_A Proto-oncogene serine/t 100.0 4.8E-34 1.6E-38 306.5 7.9 198 532-748 41-251 (320)
255 3t6q_A CD180 antigen; protein- 100.0 6.4E-32 2.2E-36 315.5 26.1 305 87-401 34-396 (606)
256 3t6q_A CD180 antigen; protein- 100.0 6.2E-32 2.1E-36 315.7 25.7 302 87-399 255-565 (606)
257 3aln_A Dual specificity mitoge 100.0 2.1E-33 7.3E-38 302.2 11.7 205 534-749 22-232 (327)
258 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 1.1E-31 3.7E-36 310.9 26.3 295 86-400 52-491 (562)
259 2y4i_B KSR2, HKSR2, kinase sup 100.0 6.8E-34 2.3E-38 304.6 7.1 204 533-749 32-246 (319)
260 3fhr_A MAP kinase-activated pr 100.0 2.4E-33 8.1E-38 303.3 11.3 196 533-749 27-232 (336)
261 2iwi_A Serine/threonine-protei 100.0 4.9E-34 1.7E-38 305.0 5.0 199 531-748 28-241 (312)
262 2rio_A Serine/threonine-protei 100.0 2.6E-33 9E-38 313.6 10.8 204 536-748 17-242 (434)
263 1u46_A ACK-1, activated CDC42 100.0 1.9E-33 6.5E-38 297.0 8.9 196 534-749 18-228 (291)
264 1ziw_A TOLL-like receptor 3; i 100.0 6.1E-31 2.1E-35 311.6 30.9 276 86-371 25-364 (680)
265 2j0j_A Focal adhesion kinase 1 100.0 3.3E-33 1.1E-37 327.7 11.0 197 533-749 389-596 (656)
266 2vuw_A Serine/threonine-protei 100.0 2.3E-33 8E-38 303.2 8.7 190 534-747 20-278 (336)
267 3cek_A Dual specificity protei 100.0 4.3E-33 1.5E-37 297.9 10.4 204 532-748 26-241 (313)
268 3p23_A Serine/threonine-protei 100.0 5.1E-33 1.8E-37 310.6 10.6 196 534-748 24-232 (432)
269 2pzi_A Probable serine/threoni 100.0 6E-33 2E-37 328.2 11.1 190 534-747 80-277 (681)
270 3j0a_A TOLL-like receptor 5; m 100.0 1E-30 3.4E-35 316.8 29.6 289 77-374 15-376 (844)
271 2dyl_A Dual specificity mitoge 100.0 6.4E-33 2.2E-37 296.8 8.8 202 533-748 24-231 (318)
272 3qa8_A MGC80376 protein; kinas 100.0 8.4E-33 2.9E-37 319.2 9.9 199 534-748 14-225 (676)
273 3uqc_A Probable conserved tran 100.0 2.3E-32 7.8E-37 288.5 12.3 171 534-750 31-206 (286)
274 3vq2_A TLR4, TOLL-like recepto 100.0 8E-31 2.7E-35 306.3 24.4 303 87-401 57-540 (606)
275 4g8a_A TOLL-like receptor 4; l 100.0 4.4E-30 1.5E-34 300.9 28.6 306 87-402 53-563 (635)
276 3j0a_A TOLL-like receptor 5; m 100.0 3.8E-30 1.3E-34 311.7 27.1 277 116-395 23-376 (844)
277 2z63_A TOLL-like receptor 4, v 100.0 1.9E-30 6.6E-35 300.5 23.1 156 259-417 344-510 (570)
278 1xku_A Decorin; proteoglycan, 100.0 7.4E-30 2.5E-34 275.0 25.3 267 117-392 52-330 (330)
279 3m2w_A MAP kinase-activated pr 100.0 2.8E-31 9.5E-36 282.0 13.8 175 534-748 17-200 (299)
280 2z81_A CD282 antigen, TOLL-lik 100.0 7.4E-31 2.5E-35 302.8 18.3 180 82-274 3-184 (549)
281 1ziw_A TOLL-like receptor 3; i 100.0 1.3E-29 4.5E-34 300.1 29.5 280 113-395 268-574 (680)
282 2ft3_A Biglycan; proteoglycan, 100.0 4E-30 1.4E-34 277.3 22.0 266 117-392 54-331 (332)
283 3dzo_A Rhoptry kinase domain; 100.0 3.8E-32 1.3E-36 302.2 4.4 210 534-749 78-320 (413)
284 2z66_A Variable lymphocyte rec 100.0 2.3E-31 7.8E-36 283.6 10.1 258 143-402 29-295 (306)
285 3bz5_A Internalin-J, INLJ; leu 100.0 2.4E-28 8.3E-33 274.7 31.1 273 86-395 42-332 (457)
286 1xku_A Decorin; proteoglycan, 100.0 1.2E-28 4.3E-33 265.4 27.1 264 119-395 33-307 (330)
287 2ft3_A Biglycan; proteoglycan, 100.0 7.4E-29 2.5E-33 267.4 25.2 263 118-394 34-307 (332)
288 2z66_A Variable lymphocyte rec 100.0 1E-29 3.5E-34 270.8 17.9 265 117-384 28-298 (306)
289 2z63_A TOLL-like receptor 4, v 100.0 3E-29 1E-33 290.5 23.2 318 87-416 29-485 (570)
290 2z80_A TOLL-like receptor 2, v 100.0 5.8E-30 2E-34 278.6 16.1 259 117-398 52-318 (353)
291 3oja_B Anopheles plasmodium-re 100.0 8.3E-29 2.8E-33 288.6 26.1 274 110-401 92-365 (597)
292 4fcg_A Uncharacterized protein 100.0 3.7E-29 1.3E-33 269.3 21.0 225 141-372 80-313 (328)
293 3bz5_A Internalin-J, INLJ; leu 100.0 1.7E-28 5.9E-33 275.9 26.7 261 112-400 37-305 (457)
294 1ozn_A Reticulon 4 receptor; N 100.0 2.6E-29 8.8E-34 264.9 18.4 211 141-352 31-242 (285)
295 4fmz_A Internalin; leucine ric 100.0 9.1E-28 3.1E-32 260.3 29.4 282 86-398 44-328 (347)
296 1wwl_A Monocyte differentiatio 100.0 2.4E-30 8.2E-35 276.6 7.8 248 113-372 39-308 (312)
297 1o6v_A Internalin A; bacterial 100.0 6E-28 2.1E-32 272.8 27.9 261 113-395 64-345 (466)
298 1o6v_A Internalin A; bacterial 100.0 6E-28 2.1E-32 272.8 27.6 281 87-398 69-370 (466)
299 3o6n_A APL1; leucine-rich repe 100.0 6E-28 2E-32 266.3 24.5 276 110-398 62-356 (390)
300 4azs_A Methyltransferase WBDD; 100.0 1.5E-30 5.1E-35 299.7 3.7 181 541-745 241-437 (569)
301 1wwl_A Monocyte differentiatio 100.0 1.5E-30 5.1E-35 278.2 3.5 245 141-395 42-310 (312)
302 4fmz_A Internalin; leucine ric 100.0 9.6E-28 3.3E-32 260.1 25.4 280 86-394 66-346 (347)
303 2z80_A TOLL-like receptor 2, v 100.0 5.3E-29 1.8E-33 270.9 14.5 247 132-405 45-300 (353)
304 3zyi_A Leucine-rich repeat-con 100.0 9.4E-28 3.2E-32 270.1 25.1 226 118-347 76-302 (452)
305 1jl5_A Outer protein YOPM; leu 100.0 2.7E-28 9.3E-33 274.1 20.3 285 87-415 12-311 (454)
306 3zyj_A Leucine-rich repeat-con 100.0 1.7E-27 5.9E-32 267.0 26.0 226 118-347 65-291 (440)
307 3zyi_A Leucine-rich repeat-con 100.0 1.6E-27 5.4E-32 268.3 25.3 228 142-373 75-303 (452)
308 4g8a_A TOLL-like receptor 4; l 100.0 2.9E-27 9.9E-32 276.9 27.7 286 110-397 93-583 (635)
309 3zyj_A Leucine-rich repeat-con 100.0 2.5E-27 8.5E-32 265.7 25.5 234 132-372 57-291 (440)
310 1ozn_A Reticulon 4 receptor; N 100.0 8.8E-28 3E-32 253.2 20.3 253 145-402 14-269 (285)
311 1jl5_A Outer protein YOPM; leu 100.0 9E-27 3.1E-31 261.7 29.5 249 117-401 111-379 (454)
312 3g06_A SSPH2 (leucine-rich rep 99.9 5.6E-26 1.9E-30 263.4 26.5 281 67-402 14-305 (622)
313 2z62_A TOLL-like receptor 4, v 99.9 5.1E-26 1.7E-30 238.5 21.4 209 142-352 28-241 (276)
314 2o6q_A Variable lymphocyte rec 99.9 1.6E-25 5.6E-30 233.9 23.3 185 142-327 37-221 (270)
315 3o53_A Protein LRIM1, AGAP0063 99.9 3.9E-28 1.3E-32 260.1 0.6 236 121-373 14-250 (317)
316 3oja_A Leucine-rich immune mol 99.9 1E-26 3.4E-31 263.8 10.3 223 142-401 34-258 (487)
317 3o53_A Protein LRIM1, AGAP0063 99.9 7.6E-27 2.6E-31 250.0 7.0 244 143-401 11-258 (317)
318 3oja_A Leucine-rich immune mol 99.9 4.9E-26 1.7E-30 258.1 13.9 221 116-352 33-255 (487)
319 2o6q_A Variable lymphocyte rec 99.9 2.9E-24 9.9E-29 224.5 25.4 204 143-350 17-220 (270)
320 3en9_A Glycoprotease, O-sialog 99.9 7.9E-27 2.7E-31 267.2 5.7 181 537-746 339-538 (540)
321 3rfs_A Internalin B, repeat mo 99.9 3E-25 1E-29 232.2 16.8 203 165-401 40-242 (272)
322 3g06_A SSPH2 (leucine-rich rep 99.9 1.2E-23 4E-28 244.0 31.8 254 117-415 40-298 (622)
323 3rfs_A Internalin B, repeat mo 99.9 4.5E-25 1.5E-29 230.9 18.0 220 121-355 23-242 (272)
324 2z62_A TOLL-like receptor 4, v 99.9 1.1E-24 3.9E-29 228.2 20.0 226 146-398 11-241 (276)
325 4glp_A Monocyte differentiatio 99.9 5.1E-25 1.7E-29 235.0 17.6 225 116-349 63-308 (310)
326 1p9a_G Platelet glycoprotein I 99.9 6.7E-24 2.3E-28 224.1 22.2 200 141-348 9-208 (290)
327 3m19_A Variable lymphocyte rec 99.9 6.9E-24 2.4E-28 219.1 20.1 160 142-301 35-194 (251)
328 1p9a_G Platelet glycoprotein I 99.9 1.7E-23 5.9E-28 220.9 21.5 204 113-325 6-209 (290)
329 2xwt_C Thyrotropin receptor; s 99.9 1.4E-23 4.8E-28 215.0 16.8 196 142-344 31-235 (239)
330 1z7x_W Ribonuclease inhibitor; 99.9 5E-27 1.7E-31 264.5 -10.3 66 114-179 53-126 (461)
331 4glp_A Monocyte differentiatio 99.9 5.7E-24 2E-28 226.9 11.6 224 141-394 63-307 (310)
332 2ast_B S-phase kinase-associat 99.9 5.7E-26 2E-30 244.9 -4.1 212 74-297 35-258 (336)
333 2xwt_C Thyrotropin receptor; s 99.9 2.9E-23 9.9E-28 212.7 16.1 197 166-370 31-236 (239)
334 3m19_A Variable lymphocyte rec 99.9 2.7E-22 9.3E-27 207.1 21.5 180 143-350 15-194 (251)
335 1z7x_W Ribonuclease inhibitor; 99.9 3.6E-26 1.2E-30 257.5 -9.5 303 86-396 56-413 (461)
336 2ast_B S-phase kinase-associat 99.9 1.3E-24 4.4E-29 234.3 1.2 220 118-345 48-282 (336)
337 1zar_A RIO2 kinase; serine kin 99.9 4.5E-24 1.5E-28 224.2 5.1 152 526-710 82-252 (282)
338 3goz_A Leucine-rich repeat-con 99.9 5E-25 1.7E-29 240.5 -2.4 228 121-349 2-267 (362)
339 2o6s_A Variable lymphocyte rec 99.9 2.2E-22 7.5E-27 201.5 16.6 133 143-275 29-161 (208)
340 2ca6_A RAN GTPase-activating p 99.9 4E-25 1.4E-29 243.4 -4.5 240 112-351 27-319 (386)
341 1h6u_A Internalin H; cell adhe 99.9 2.2E-22 7.6E-27 214.3 16.4 192 141-349 40-231 (308)
342 2ca6_A RAN GTPase-activating p 99.9 5.4E-25 1.9E-29 242.3 -4.5 244 132-398 23-320 (386)
343 1h6u_A Internalin H; cell adhe 99.9 5.5E-22 1.9E-26 211.3 17.3 198 113-328 37-234 (308)
344 3cvr_A Invasion plasmid antige 99.9 1.9E-22 6.4E-27 231.1 13.1 189 119-354 61-249 (571)
345 3goz_A Leucine-rich repeat-con 99.9 2.5E-24 8.7E-29 234.8 -2.7 256 146-401 2-304 (362)
346 2o6s_A Variable lymphocyte rec 99.9 1.4E-21 4.9E-26 195.5 17.2 181 145-336 10-190 (208)
347 3cvr_A Invasion plasmid antige 99.9 1.5E-21 5E-26 223.7 19.3 186 143-380 60-250 (571)
348 4ay9_X Follicle-stimulating ho 99.9 2.7E-21 9.3E-26 209.8 19.9 214 132-352 23-240 (350)
349 4ay9_X Follicle-stimulating ho 99.9 1E-20 3.4E-25 205.3 20.6 240 145-393 12-258 (350)
350 4b8c_D Glucose-repressible alc 99.8 1.5E-22 5.2E-27 240.0 2.1 224 47-303 130-358 (727)
351 3e6j_A Variable lymphocyte rec 99.8 2.3E-20 8E-25 189.8 16.7 135 142-277 40-174 (229)
352 2v70_A SLIT-2, SLIT homolog 2 99.8 1.1E-19 3.8E-24 183.6 15.5 134 143-276 33-167 (220)
353 2v70_A SLIT-2, SLIT homolog 2 99.8 1.6E-19 5.6E-24 182.3 15.6 156 145-303 14-170 (220)
354 2xot_A Amphoterin-induced prot 99.8 6.3E-20 2.2E-24 199.9 13.0 164 133-299 33-202 (361)
355 2v9t_B SLIT homolog 2 protein 99.8 3.1E-19 1.1E-23 180.2 17.0 133 167-299 33-165 (220)
356 1m9s_A Internalin B; cell inva 99.8 4.2E-20 1.4E-24 213.9 11.5 171 141-326 42-212 (605)
357 1h6t_A Internalin B; cell adhe 99.8 8.1E-20 2.8E-24 192.8 12.5 170 141-349 45-214 (291)
358 2xot_A Amphoterin-induced prot 99.8 8.5E-20 2.9E-24 198.8 13.0 176 145-348 21-202 (361)
359 2v9t_B SLIT homolog 2 protein 99.8 4E-19 1.4E-23 179.4 16.6 135 142-276 32-166 (220)
360 1zth_A RIO1 serine protein kin 99.8 6.2E-20 2.1E-24 190.2 10.3 137 536-690 49-219 (258)
361 1m9s_A Internalin B; cell inva 99.8 1.2E-19 4.1E-24 210.0 13.7 193 141-350 20-212 (605)
362 1h6t_A Internalin B; cell adhe 99.8 3.9E-19 1.3E-23 187.6 16.1 173 113-300 42-214 (291)
363 3e6j_A Variable lymphocyte rec 99.8 1.1E-18 3.9E-23 177.3 18.5 154 144-301 21-174 (229)
364 3ogk_B Coronatine-insensitive 99.8 1.4E-21 4.9E-26 227.1 -5.1 280 114-396 161-503 (592)
365 3ogk_B Coronatine-insensitive 99.8 5.6E-21 1.9E-25 222.1 -4.5 303 87-400 113-457 (592)
366 4ezg_A Putative uncharacterize 99.8 8.6E-19 3E-23 173.7 11.3 152 141-299 43-194 (197)
367 4ezg_A Putative uncharacterize 99.8 1.4E-18 4.6E-23 172.3 10.7 155 114-276 41-195 (197)
368 1dce_A Protein (RAB geranylger 99.8 5.4E-21 1.9E-25 219.9 -7.8 180 114-301 346-548 (567)
369 4b8c_D Glucose-repressible alc 99.8 1.3E-19 4.5E-24 214.8 3.1 163 172-345 207-369 (727)
370 1dce_A Protein (RAB geranylger 99.7 9.8E-22 3.3E-26 226.1 -15.6 188 141-352 348-550 (567)
371 1xeu_A Internalin C; cellular 99.7 1.1E-18 3.8E-23 181.3 8.1 146 141-299 40-185 (263)
372 1xeu_A Internalin C; cellular 99.7 6.9E-18 2.3E-22 175.3 10.1 173 141-329 18-190 (263)
373 1w8a_A SLIT protein; signaling 99.7 3.8E-17 1.3E-21 161.2 13.5 109 167-275 30-139 (192)
374 1w8a_A SLIT protein; signaling 99.7 5.8E-17 2E-21 159.9 13.8 132 169-303 11-143 (192)
375 2ell_A Acidic leucine-rich nuc 99.7 4.3E-17 1.5E-21 157.0 10.4 133 141-275 23-160 (168)
376 2p1m_B Transport inhibitor res 99.7 2E-19 6.8E-24 209.0 -8.6 227 115-343 128-405 (594)
377 4gyi_A RIO2 kinase; protein ki 99.7 3.4E-17 1.2E-21 176.6 6.3 136 535-689 96-264 (397)
378 2p1m_B Transport inhibitor res 99.7 8.2E-19 2.8E-23 203.8 -6.9 287 113-401 101-451 (594)
379 2ell_A Acidic leucine-rich nuc 99.7 1.9E-16 6.4E-21 152.5 10.3 132 190-348 24-160 (168)
380 2je0_A Acidic leucine-rich nuc 99.7 4E-17 1.4E-21 153.9 5.4 128 141-270 16-148 (149)
381 2wfh_A SLIT homolog 2 protein 99.7 8.8E-16 3E-20 151.5 14.7 127 145-275 13-139 (193)
382 2o6r_A Variable lymphocyte rec 99.7 1.4E-15 4.7E-20 147.8 15.5 130 145-277 10-139 (177)
383 2o6r_A Variable lymphocyte rec 99.6 1.9E-15 6.6E-20 146.7 15.5 132 168-302 9-140 (177)
384 2je0_A Acidic leucine-rich nuc 99.6 8.1E-17 2.8E-21 151.7 5.6 127 166-294 17-148 (149)
385 2wfh_A SLIT homolog 2 protein 99.6 1.4E-15 4.8E-20 150.1 14.6 128 169-300 13-140 (193)
386 3sb4_A Hypothetical leucine ri 99.6 2E-15 6.9E-20 162.0 8.0 237 116-364 24-325 (329)
387 3sb4_A Hypothetical leucine ri 99.6 7.8E-15 2.7E-19 157.4 12.5 220 112-342 43-328 (329)
388 1ds9_A Outer arm dynein; leuci 99.5 1E-17 3.5E-22 166.1 -11.5 114 161-279 43-157 (198)
389 1ds9_A Outer arm dynein; leuci 99.5 1.5E-17 5.1E-22 164.9 -10.4 156 112-275 13-185 (198)
390 1a9n_A U2A', U2A'; complex (nu 99.5 5.6E-15 1.9E-19 143.4 5.8 62 235-298 85-152 (176)
391 1a9n_A U2A', U2A'; complex (nu 99.5 6.4E-15 2.2E-19 142.9 6.2 129 141-275 18-153 (176)
392 3g39_A Variable lymphocyte rec 99.5 1.6E-13 5.5E-18 132.3 13.0 86 190-275 30-115 (170)
393 3g39_A Variable lymphocyte rec 99.5 1.8E-13 6.2E-18 131.9 13.2 107 144-253 11-117 (170)
394 4fdw_A Leucine rich hypothetic 99.5 1.1E-12 3.6E-17 144.3 20.2 262 117-393 113-382 (401)
395 2r9u_A Variable lymphocyte rec 99.5 3.2E-13 1.1E-17 130.7 13.2 103 170-275 16-118 (174)
396 2r9u_A Variable lymphocyte rec 99.5 4.1E-13 1.4E-17 130.0 13.0 105 145-252 15-119 (174)
397 4fdw_A Leucine rich hypothetic 99.4 8.1E-12 2.8E-16 137.3 21.7 240 141-394 112-358 (401)
398 2ifg_A High affinity nerve gro 99.3 7.3E-12 2.5E-16 135.1 10.8 101 147-250 13-115 (347)
399 3tm0_A Aminoglycoside 3'-phosp 99.3 8.4E-12 2.9E-16 129.0 10.7 146 529-688 9-212 (263)
400 2ifg_A High affinity nerve gro 99.3 3.6E-12 1.2E-16 137.5 7.6 103 170-275 12-116 (347)
401 3un9_A NLR family member X1; l 99.2 9.6E-14 3.3E-18 151.2 -9.1 135 141-275 71-224 (372)
402 3un9_A NLR family member X1; l 99.2 9.1E-14 3.1E-18 151.4 -9.6 167 116-282 71-259 (372)
403 1nd4_A Aminoglycoside 3'-phosp 99.2 4.4E-11 1.5E-15 123.0 8.8 136 535-688 21-213 (264)
404 3dxp_A Putative acyl-COA dehyd 99.0 5.2E-10 1.8E-14 121.2 10.5 142 538-689 42-248 (359)
405 4fs7_A Uncharacterized protein 98.9 1.1E-08 3.9E-13 112.1 17.1 248 112-370 66-353 (394)
406 2ra8_A Uncharacterized protein 98.8 6.2E-10 2.1E-14 120.2 2.4 135 162-299 168-320 (362)
407 3sg8_A APH(2'')-ID; antibiotic 98.8 9.5E-10 3.2E-14 116.2 3.1 193 539-746 25-287 (304)
408 2ra8_A Uncharacterized protein 98.8 1.1E-09 3.7E-14 118.3 2.2 190 141-348 106-320 (362)
409 4fs7_A Uncharacterized protein 98.7 1.2E-07 4E-12 103.9 16.1 246 111-369 88-375 (394)
410 4gt6_A Cell surface protein; l 98.7 2.5E-07 8.4E-12 101.4 18.5 107 281-392 260-368 (394)
411 3rw6_A Nuclear RNA export fact 98.7 7.6E-11 2.6E-15 121.1 -10.6 15 77-91 79-95 (267)
412 3r70_A Aminoglycoside phosphot 98.6 1.4E-07 4.8E-12 100.2 10.8 136 535-689 38-237 (320)
413 4gt6_A Cell surface protein; l 98.6 1.9E-06 6.5E-11 94.2 20.1 261 118-390 65-343 (394)
414 3tdw_A Gentamicin resistance p 98.5 6.1E-07 2.1E-11 94.6 12.7 137 539-689 24-224 (306)
415 3d1u_A Putative fructosamine-3 98.5 1.1E-06 3.7E-11 91.7 13.4 145 537-688 18-215 (288)
416 3rw6_A Nuclear RNA export fact 98.4 3.3E-08 1.1E-12 101.4 -0.6 66 164-231 168-237 (267)
417 4gkh_A Aminoglycoside 3'-phosp 98.3 2.8E-06 9.5E-11 87.6 11.6 135 540-688 30-222 (272)
418 3ovc_A Hygromycin-B 4-O-kinase 98.3 2.4E-06 8.1E-11 92.3 11.3 148 535-689 42-243 (362)
419 1io0_A Tropomodulin; LRR prote 98.3 3.7E-08 1.3E-12 95.8 -3.7 39 141-179 35-78 (185)
420 1io0_A Tropomodulin; LRR prote 98.2 5E-08 1.7E-12 94.9 -2.9 91 112-203 31-136 (185)
421 4h09_A Hypothetical leucine ri 98.2 4.5E-05 1.5E-09 82.6 19.9 245 111-369 63-319 (379)
422 3ats_A Putative uncharacterize 98.1 3.3E-06 1.1E-10 90.9 8.0 81 539-619 25-122 (357)
423 4h09_A Hypothetical leucine ri 98.1 0.00015 5.1E-09 78.5 19.9 274 115-405 44-332 (379)
424 2q83_A YTAA protein; 2635576, 98.0 1.5E-05 5E-10 85.0 10.9 146 539-688 37-251 (346)
425 2olc_A MTR kinase, methylthior 97.9 2.6E-05 8.7E-10 85.3 9.8 74 539-615 35-120 (397)
426 3f7w_A Putative fructosamine-3 97.7 0.00015 5.3E-09 75.2 11.6 77 536-617 17-97 (288)
427 1zyl_A Hypothetical protein YI 97.5 0.0011 3.8E-08 70.0 14.0 163 524-689 11-223 (328)
428 3jr1_A Putative fructosamine-3 97.4 0.0013 4.6E-08 68.9 13.9 144 537-685 39-232 (312)
429 3e4g_A ATP synthase subunit S, 97.4 3.1E-05 1E-09 73.8 0.6 83 143-225 62-150 (176)
430 2ppq_A HSK, HK, homoserine kin 97.3 0.00045 1.5E-08 72.8 8.7 164 523-688 6-216 (322)
431 2pyw_A Uncharacterized protein 97.2 0.00088 3E-08 73.6 10.6 73 538-614 38-122 (420)
432 3e4g_A ATP synthase subunit S, 97.2 5E-05 1.7E-09 72.3 -0.1 83 166-248 61-149 (176)
433 3dxq_A Choline/ethanolamine ki 97.1 0.001 3.5E-08 69.4 9.0 73 537-617 21-95 (301)
434 3feg_A Choline/ethanolamine ki 96.8 0.0032 1.1E-07 67.9 9.3 143 539-688 55-253 (379)
435 3csv_A Aminoglycoside phosphot 96.7 0.0064 2.2E-07 64.2 10.9 146 539-689 23-217 (333)
436 2qg7_A Ethanolamine kinase PV0 96.5 0.0054 1.9E-07 67.9 8.9 74 539-617 113-188 (458)
437 3c5i_A Choline kinase; choline 96.5 0.0019 6.5E-08 69.5 5.1 74 539-617 38-121 (369)
438 1nw1_A Choline kinase (49.2 KD 96.4 0.0072 2.5E-07 66.4 9.3 73 539-617 78-159 (429)
439 3rfe_A Platelet glycoprotein I 96.3 0.0044 1.5E-07 55.9 5.8 37 143-179 32-68 (130)
440 3rfe_A Platelet glycoprotein I 96.2 0.0072 2.5E-07 54.4 6.4 33 192-224 33-65 (130)
441 1pgv_A TMD-1, tropomodulin TMD 96.2 0.00054 1.8E-08 66.4 -1.4 7 77-83 6-12 (197)
442 1pgv_A TMD-1, tropomodulin TMD 96.1 0.00063 2.2E-08 65.9 -1.1 65 163-227 38-111 (197)
443 3i1a_A Spectinomycin phosphotr 96.1 0.019 6.5E-07 60.9 10.0 31 659-689 206-236 (339)
444 3f2s_A CK, chetk-alpha, cholin 94.6 0.061 2.1E-06 58.1 8.0 143 539-688 57-279 (401)
445 3mes_A Choline kinase; malaria 93.5 0.22 7.4E-06 54.3 9.7 74 539-617 75-157 (424)
446 2yle_A Protein spire homolog 1 89.4 0.34 1.2E-05 47.2 4.9 99 615-741 33-131 (229)
447 3cxl_A N-chimerin; SH2, RHO-GA 86.5 0.096 3.3E-06 57.9 -1.1 58 539-599 147-214 (463)
448 3g15_A CK, chetk-alpha, cholin 84.9 1.5 5.2E-05 47.2 7.5 28 661-688 246-279 (401)
449 4ann_A ESSB; membrane protein, 78.1 6.4 0.00022 38.1 8.3 86 586-688 42-127 (215)
450 4ano_A ESSB; membrane protein, 75.8 8.7 0.0003 37.2 8.5 85 586-688 47-132 (219)
451 2l2t_A Receptor tyrosine-prote 72.0 1.1 3.8E-05 31.3 0.8 17 462-478 12-28 (44)
452 2ks1_B Epidermal growth factor 71.7 1.5 5.1E-05 30.7 1.4 16 462-477 13-28 (44)
453 3ls8_A Phosphatidylinositol 3- 27.2 2.5E+02 0.0085 31.5 10.3 76 606-688 414-501 (614)
454 2ks1_B Epidermal growth factor 26.7 44 0.0015 23.3 2.6 26 464-489 11-37 (44)
455 1cja_A Protein (actin-fragmin 26.1 1.9E+02 0.0065 29.7 8.4 139 540-690 75-238 (342)
456 2l8s_A Integrin alpha-1; trans 23.9 25 0.00085 25.7 0.9 10 464-473 14-23 (54)
No 1
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=1.1e-47 Score=406.47 Aligned_cols=197 Identities=18% Similarity=0.307 Sum_probs=166.8
Q ss_pred CCCCccceeecCCcceEEEEEEcCCcEEEEEEeeccccC---HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEe
Q 004248 534 GDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVK---TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYK 610 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~---~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~E 610 (766)
++|...++||+|+||+||+|++.+ .||||+++..... .++|.+|+++|++++|||||+++|+|.+ +..|+|||
T Consensus 36 ~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~--~~~~iVmE 111 (307)
T 3omv_A 36 SEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK--DNLAIVTQ 111 (307)
T ss_dssp TSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS--SSCEEEEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC--CeEEEEEE
Confidence 467778999999999999998653 5999998754332 4679999999999999999999998753 56899999
Q ss_pred eCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhc
Q 004248 611 YMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQ 690 (766)
Q Consensus 611 y~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~ 690 (766)
||++|+|.++|+.... .++|.++..|+.|||+||+|||++ +||||||||+||||++++++||+|||+|+..
T Consensus 112 y~~gGsL~~~l~~~~~------~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~ 182 (307)
T 3omv_A 112 WCEGSSLYKHLHVQET------KFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVK 182 (307)
T ss_dssp CCSSCBHHHHHHTSCC------CCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCSSCBC-
T ss_pred cCCCCCHHHHHhhcCC------CCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeeccCceec
Confidence 9999999999976432 499999999999999999999997 9999999999999999999999999999865
Q ss_pred CC-----CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 691 GG-----DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 691 ~~-----~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
.. .....+||+.|||||.+.....+. ++.|+|||||||++|||+||+.||...
T Consensus 183 ~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~------y~~ksDVwS~Gvvl~Elltg~~Pf~~~ 240 (307)
T 3omv_A 183 SRWSGSQQVEQPTGSVLWMAPEVIRMQDNNP------FSFQSDVYSYGIVLYELMTGELPYSHI 240 (307)
T ss_dssp -----------CCCCTTSCCHHHHHCCSSCC------CCHHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred ccCCcceeecccccCCCccCHHHhhccCCCC------CCcHHHhHhHHHHHHHHHHCCCCCCCC
Confidence 32 233457999999999876543332 689999999999999999999999643
No 2
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=9.9e-48 Score=412.54 Aligned_cols=198 Identities=19% Similarity=0.227 Sum_probs=168.8
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC---HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK---TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVY 609 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~---~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~ 609 (766)
++|+..+.||+|+||+||+|+. .+|+.||||+++..... .++|.+|+++|++++|||||++++++.+ ++..|+||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~-~~~~yiVm 102 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEE-NGSLYIVM 102 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-TTEEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEE-CCEEEEEE
Confidence 6799999999999999999994 67999999999765433 5679999999999999999999998765 67899999
Q ss_pred eeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhh
Q 004248 610 KYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCA 689 (766)
Q Consensus 610 Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~ 689 (766)
|||+||+|.++|..++. ..+++.+...|+.||+.||+|||++ +||||||||+||||++++.+||+|||+|+.
T Consensus 103 Ey~~gg~L~~~i~~~~~-----~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~ 174 (350)
T 4b9d_A 103 DYCEGGDLFKRINAQKG-----VLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARV 174 (350)
T ss_dssp ECCTTCBHHHHHHHTTT-----CCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTTEESC
T ss_pred eCCCCCcHHHHHHHcCC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEccccccee
Confidence 99999999999976543 3478999999999999999999998 999999999999999999999999999987
Q ss_pred cCCC---CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 690 QGGD---AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 690 ~~~~---~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
.... ....+||+.|||||.+.+.. ++.++||||+||++|||+||+.||...
T Consensus 175 ~~~~~~~~~~~~GT~~YmAPE~l~~~~---------y~~~~DiwSlGvilyemltG~~PF~~~ 228 (350)
T 4b9d_A 175 LNSTVELARACIGTPYYLSPEICENKP---------YNNKSDIWALGCVLYELCTLKHAFEAG 228 (350)
T ss_dssp CCHHHHHHHHHHSCCTTCCHHHHTTCC---------CCHHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ecCCcccccccCCCccccCHHHHCCCC---------CCcHHHHHHHHHHHHHHHHCCCCCCCc
Confidence 6432 23467999999999887654 478999999999999999999999643
No 3
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=1.9e-47 Score=409.70 Aligned_cols=195 Identities=17% Similarity=0.238 Sum_probs=173.1
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC-HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEee
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK-TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKY 611 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~-~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey 611 (766)
+.|+..+.||+|+||+||+|+. .+|+.||||+++..... .+.+.+|+++|++++|||||++++++.+ ++.+|+||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~-~~~~~ivmEy 152 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLV-GDELWVVMEF 152 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEE-TTEEEEEECC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEE-CCEEEEEEeC
Confidence 4588899999999999999995 57999999999765443 5678999999999999999999998766 6789999999
Q ss_pred CCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcC
Q 004248 612 MPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQG 691 (766)
Q Consensus 612 ~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~ 691 (766)
|++|+|.+++.+. .+++.++..|+.||+.||+|||++ +||||||||+|||++.++++||+|||+|+...
T Consensus 153 ~~gg~L~~~l~~~--------~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~ 221 (346)
T 4fih_A 153 LEGGALTDIVTHT--------RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVS 221 (346)
T ss_dssp CTTEEHHHHHHHS--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred CCCCcHHHHHHcC--------CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCceecC
Confidence 9999999999653 389999999999999999999998 99999999999999999999999999998763
Q ss_pred C---CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 692 G---DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 692 ~---~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
. ...+.+||+.|||||.+.... |+.++||||+||++|||+||+.||...
T Consensus 222 ~~~~~~~~~~GTp~YmAPEvl~~~~---------y~~~~DiWSlGvilyeml~G~~PF~~~ 273 (346)
T 4fih_A 222 KEVPRRKSLVGTPYWMAPELISRLP---------YGPEVDIWSLGIMVIEMVDGEPPYFNE 273 (346)
T ss_dssp SSSCCBCCCCSCGGGCCHHHHTTCC---------BCTHHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred CCCCcccccccCcCcCCHHHHCCCC---------CCcHHHHHHHHHHHHHHHHCCCCCCCc
Confidence 2 345678999999999886554 478999999999999999999999643
No 4
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=1.7e-47 Score=404.03 Aligned_cols=196 Identities=17% Similarity=0.213 Sum_probs=173.5
Q ss_pred CCCCccceeecCCcceEEEEE-EcCCcEEEEEEeeccc----cCHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGI-LEGGIPVVIKRIDLQS----VKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLV 608 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~-~~~g~~vavK~l~~~~----~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV 608 (766)
++|+..++||+|+||+||+|+ ..+|+.||||++++.. ...+.+.+|+++|++++|||||++++++.+ ++..|+|
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~-~~~~yiv 110 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQD-DEKLYFG 110 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEEC-SSEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEe-CCEEEEE
Confidence 469999999999999999999 4679999999997543 235689999999999999999999997765 6789999
Q ss_pred EeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhh
Q 004248 609 YKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVC 688 (766)
Q Consensus 609 ~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~ 688 (766)
||||+||||.++|.+.+. +++.+...|+.||+.||+|||++ +||||||||+|||+++++.+||+|||+|+
T Consensus 111 mEy~~gG~L~~~i~~~~~-------l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFGla~ 180 (311)
T 4aw0_A 111 LSYAKNGELLKYIRKIGS-------FDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAK 180 (311)
T ss_dssp ECCCTTEEHHHHHHHHSS-------CCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCE
T ss_pred EecCCCCCHHHHHHHcCC-------CCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcCCce
Confidence 999999999999986543 99999999999999999999998 99999999999999999999999999998
Q ss_pred hcCC-----CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 689 AQGG-----DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 689 ~~~~-----~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
.... ...+.+||+.|||||.+.+.. ++.++||||+||++|||+||+.||...
T Consensus 181 ~~~~~~~~~~~~~~~GTp~YmAPEvl~~~~---------y~~~~DiWSlGvilyeml~G~~PF~~~ 237 (311)
T 4aw0_A 181 VLSPESKQARANSFVGTAQYVSPELLTEKS---------ACKSSDLWALGCIIYQLVAGLPPFRAG 237 (311)
T ss_dssp ECCTTTTCCCBCCCCSCGGGCCHHHHHHSC---------BCHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ecCCCCCcccccCcccCcccCCHHHHcCCC---------CCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 7632 234568999999999886544 468999999999999999999999643
No 5
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=2.4e-47 Score=403.64 Aligned_cols=203 Identities=20% Similarity=0.290 Sum_probs=169.6
Q ss_pred CCCCccceeecCCcceEEEEEEc------CCcEEEEEEeeccccC-HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGILE------GGIPVVIKRIDLQSVK-TEAYLLELDFFSKVSHARLVPLLGHCMERENEKF 606 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~-~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~ 606 (766)
++|...+.||+|+||+||+|++. +++.||||+++..... .++|.+|+++|++++|||||+++|+|.+ ++..|
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~-~~~~~ 91 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVE-GDPLI 91 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSSEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEee-CCEEE
Confidence 45777899999999999999853 4789999999754433 5689999999999999999999998876 56899
Q ss_pred EEEeeCCCCChhhhhhccCC------CCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEE
Q 004248 607 LVYKYMPNGDLSSSLYRKTN------TEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVR 680 (766)
Q Consensus 607 lV~Ey~~~GsL~~~l~~~~~------~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~k 680 (766)
+|||||++|||.++|++.+. .......++|.++..|+.|||+||+|||++ +||||||||+|||+++++.+|
T Consensus 92 lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~~~~K 168 (299)
T 4asz_A 92 MVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVK 168 (299)
T ss_dssp EEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEE
T ss_pred EEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCCCcEE
Confidence 99999999999999976431 011224699999999999999999999997 999999999999999999999
Q ss_pred eccchhhhhcCCC-----CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCCC
Q 004248 681 LGSLSEVCAQGGD-----AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLSS 749 (766)
Q Consensus 681 l~DFG~a~~~~~~-----~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~~ 749 (766)
|+|||+|+..... .....||..|||||.+.... +++|+|||||||++|||+| |+.||...
T Consensus 169 i~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~---------~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~ 234 (299)
T 4asz_A 169 IGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRK---------FTTESDVWSLGVVLWEIFTYGKQPWYQL 234 (299)
T ss_dssp ECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCC---------CCHHHHHHHHHHHHHHHHTTTCCTTTTS
T ss_pred ECCcccceecCCCCceeecCceecChhhcCHHHHcCCC---------CCchhhHHHHHHHHHHHHcCCCCCCCCC
Confidence 9999999865322 22346899999999886544 5889999999999999999 89999643
No 6
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=1.1e-46 Score=395.89 Aligned_cols=195 Identities=17% Similarity=0.220 Sum_probs=166.9
Q ss_pred CccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC---HHHHHHHHHHHhhcCCCCcccceeEEEec---CCcEEEEE
Q 004248 537 SDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK---TEAYLLELDFFSKVSHARLVPLLGHCMER---ENEKFLVY 609 (766)
Q Consensus 537 ~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~---~~~~~~E~~~l~~l~H~niv~l~~~~~~~---~~~~~lV~ 609 (766)
+..++||+|+||+||+|.. .+++.||||++...... .++|.+|+++|++++|||||+++++|... ++.+|+||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 4557899999999999995 57899999999765433 56799999999999999999999987542 23589999
Q ss_pred eeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCC-CCcEEeccchhhh
Q 004248 610 KYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDD-KFEVRLGSLSEVC 688 (766)
Q Consensus 610 Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~-~~~~kl~DFG~a~ 688 (766)
|||++|+|.++|.+.+ .+++..+..|+.||+.||+|||++ .++||||||||+||||+. ++.+||+|||+|+
T Consensus 109 Ey~~gg~L~~~l~~~~-------~l~~~~~~~~~~qi~~aL~ylH~~-~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~ 180 (290)
T 3fpq_A 109 ELMTSGTLKTYLKRFK-------VMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLAT 180 (290)
T ss_dssp ECCCSCBHHHHHHHHS-------SCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCCCCCGGGEEESSTTSCEEECCTTGGG
T ss_pred eCCCCCCHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC-CCCEEecccChhheeEECCCCCEEEEeCcCCE
Confidence 9999999999998654 389999999999999999999986 234999999999999984 7999999999998
Q ss_pred hcCC-CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 689 AQGG-DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 689 ~~~~-~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
.... ...+.+||+.|||||.+.. . ++.++|||||||++|||+||+.||...
T Consensus 181 ~~~~~~~~~~~GTp~YmAPE~~~~-~---------y~~~~DiwSlGvilyelltg~~Pf~~~ 232 (290)
T 3fpq_A 181 LKRASFAKAVIGTPEFMAPEMYEE-K---------YDESVDVYAFGMCMLEMATSEYPYSEC 232 (290)
T ss_dssp GCCTTSBEESCSSCCCCCGGGGGT-C---------CCTHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred eCCCCccCCcccCccccCHHHcCC-C---------CCcHHHHHHHHHHHHHHHHCCCCCCCC
Confidence 7643 3456689999999998742 2 578999999999999999999999543
No 7
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=9.1e-47 Score=404.65 Aligned_cols=203 Identities=20% Similarity=0.265 Sum_probs=165.9
Q ss_pred CCCCccceeecCCcceEEEEEEc------CCcEEEEEEeeccccC-HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGILE------GGIPVVIKRIDLQSVK-TEAYLLELDFFSKVSHARLVPLLGHCMERENEKF 606 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~-~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~ 606 (766)
++|...++||+|+||+||+|++. +++.||||+++..... .++|.+|+++|++++|||||+++|+|.+ ++..|
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~-~~~~~ 119 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTE-GRPLL 119 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSSEE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEE-CCEEE
Confidence 35666789999999999999853 4789999999754433 5789999999999999999999998876 56899
Q ss_pred EEEeeCCCCChhhhhhccCCCC--------CcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCc
Q 004248 607 LVYKYMPNGDLSSSLYRKTNTE--------DDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFE 678 (766)
Q Consensus 607 lV~Ey~~~GsL~~~l~~~~~~~--------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~ 678 (766)
+|||||++|+|.++|++..... ....+++|.+++.|+.|||+||+|||+. +||||||||+||||+++++
T Consensus 120 lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~~~~~ 196 (329)
T 4aoj_A 120 MVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVGQGLV 196 (329)
T ss_dssp EEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTE
T ss_pred EEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEECCCCc
Confidence 9999999999999998653210 1124699999999999999999999997 9999999999999999999
Q ss_pred EEeccchhhhhcCCC-----CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCCC
Q 004248 679 VRLGSLSEVCAQGGD-----AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLSS 749 (766)
Q Consensus 679 ~kl~DFG~a~~~~~~-----~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~~ 749 (766)
+||+|||+|+..... .....||+.|||||.+.... +++++|||||||++|||+| |+.||...
T Consensus 197 ~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~---------~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~ 264 (329)
T 4aoj_A 197 VKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRK---------FTTESDVWSFGVVLWEIFTYGKQPWYQL 264 (329)
T ss_dssp EEECCCC----------------CCCCGGGCCHHHHTTCC---------CCHHHHHHHHHHHHHHHHTTSCCTTCSS
T ss_pred EEEcccccceeccCCCcceecCcccccccccChhhhcCCC---------CCccccccchHHHHHHHHcCCCCCCCCC
Confidence 999999999865321 23456899999999886554 5789999999999999999 99999643
No 8
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.5e-46 Score=391.38 Aligned_cols=197 Identities=14% Similarity=0.204 Sum_probs=160.5
Q ss_pred hCCCCccceeecCCcceEEEEE-EcCCcEEEEEEeecccc----CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEE
Q 004248 533 TGDFSDANLIKNGHSGDLFRGI-LEGGIPVVIKRIDLQSV----KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFL 607 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~-~~~g~~vavK~l~~~~~----~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~l 607 (766)
.++|+..+.||+|+||+||+|+ ..+|+.||||+++.... ..+++.+|+++|++++|||||++++++.+ ++..|+
T Consensus 12 ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~-~~~~~i 90 (275)
T 3hyh_A 12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKS-KDEIIM 90 (275)
T ss_dssp --CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEEC-SSEEEE
T ss_pred eeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEE-CCEEEE
Confidence 3689999999999999999999 46799999999975432 25679999999999999999999997765 678999
Q ss_pred EEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhh
Q 004248 608 VYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEV 687 (766)
Q Consensus 608 V~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a 687 (766)
||||| +|+|.+++.+++ .+++.+...++.||+.||+|||++ +||||||||+|||+++++++||+|||+|
T Consensus 91 vmEy~-~g~L~~~l~~~~-------~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DFGla 159 (275)
T 3hyh_A 91 VIEYA-GNELFDYIVQRD-------KMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLS 159 (275)
T ss_dssp EEECC-CEEHHHHHHHSC-------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCSSCC
T ss_pred EEeCC-CCCHHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeecCCC
Confidence 99999 689999997654 399999999999999999999998 9999999999999999999999999999
Q ss_pred hhcCC--CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 688 CAQGG--DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 688 ~~~~~--~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
+.... ...+.+||+.|+|||.+.+..+ ++.++||||+||++|||+||+.||...
T Consensus 160 ~~~~~~~~~~~~~GT~~Y~APE~~~~~~y--------~~~~~DiwSlGvily~lltg~~PF~~~ 215 (275)
T 3hyh_A 160 NIMTDGNFLKTSCGSPNYAAPEVISGKLY--------AGPEVDVWSCGVILYVMLCRRLPFDDE 215 (275)
T ss_dssp ---------------CTTSCHHHHSSSSC--------CCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred eecCCCCccCCeeECcccCChhhhcCCCC--------CCChhhhHHHHHHHHHHHHCCCCCCCC
Confidence 87632 3455789999999999876543 367999999999999999999999643
No 9
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=7.4e-47 Score=401.57 Aligned_cols=201 Identities=19% Similarity=0.245 Sum_probs=169.1
Q ss_pred CCccceeecCCcceEEEEEE------cCCcEEEEEEeeccccC--HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEE
Q 004248 536 FSDANLIKNGHSGDLFRGIL------EGGIPVVIKRIDLQSVK--TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFL 607 (766)
Q Consensus 536 ~~~~~~ig~G~~g~Vy~~~~------~~g~~vavK~l~~~~~~--~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~l 607 (766)
++..++||+|+||+||+|++ .+++.||||+++..... .++|.+|+++|++++|||||+++|+|.+ ++..++
T Consensus 28 ~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~~l 106 (308)
T 4gt4_A 28 VRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTK-DQPLSM 106 (308)
T ss_dssp EEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSSCEE
T ss_pred CeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEE-CCEEEE
Confidence 45578899999999999985 24789999999654332 6789999999999999999999998876 567999
Q ss_pred EEeeCCCCChhhhhhccCCCC---------CcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCc
Q 004248 608 VYKYMPNGDLSSSLYRKTNTE---------DDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFE 678 (766)
Q Consensus 608 V~Ey~~~GsL~~~l~~~~~~~---------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~ 678 (766)
|||||++|||.++|+.+.... .....++|.++..|+.|||+||+|||++ +||||||||+||||+++++
T Consensus 107 V~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NILl~~~~~ 183 (308)
T 4gt4_A 107 IFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLN 183 (308)
T ss_dssp EEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGC
T ss_pred EEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceEECCCCC
Confidence 999999999999997543210 1124599999999999999999999998 9999999999999999999
Q ss_pred EEeccchhhhhcCC-----CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCCC
Q 004248 679 VRLGSLSEVCAQGG-----DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLSS 749 (766)
Q Consensus 679 ~kl~DFG~a~~~~~-----~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~~ 749 (766)
+||+|||+|+.... ......||..|+|||.+..+. ++.|+|||||||++|||+| |+.||...
T Consensus 184 ~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~---------~s~ksDVwSfGvvl~El~t~g~~Pf~~~ 251 (308)
T 4gt4_A 184 VKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGK---------FSIDSDIWSYGVVLWEVFSYGLQPYCGY 251 (308)
T ss_dssp EEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCC---------CCHHHHHHHHHHHHHHHHTTTCCTTTTC
T ss_pred EEECCcccceeccCCCceeEecccccCCcccCHHHHhCCC---------CCccchhhhHHHHHHHHHhCCCCCCCCC
Confidence 99999999986521 233457899999999876544 5889999999999999999 89999543
No 10
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=2e-46 Score=411.56 Aligned_cols=195 Identities=17% Similarity=0.238 Sum_probs=173.5
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC-HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEee
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK-TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKY 611 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~-~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey 611 (766)
++|+..++||+|+||+||+|+. .+|+.||||+++..... .+.+.+|+++|++++|||||++++++.+ ++.+|+||||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~-~~~~~iVmEy 229 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLV-GDELWVVMEF 229 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEE-TTEEEEEEEC
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEE-CCEEEEEEeC
Confidence 4689999999999999999995 67999999999765443 5679999999999999999999998776 6789999999
Q ss_pred CCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcC
Q 004248 612 MPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQG 691 (766)
Q Consensus 612 ~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~ 691 (766)
|+||+|.+++... .+++.++..|+.||+.||+|||++ +||||||||+||||+.+|.+||+|||+|+...
T Consensus 230 ~~gG~L~~~i~~~--------~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~ 298 (423)
T 4fie_A 230 LEGGALTDIVTHT--------RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVS 298 (423)
T ss_dssp CTTEEHHHHHHHS--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCEECC
T ss_pred CCCCcHHHHHhcc--------CCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccceECC
Confidence 9999999999643 389999999999999999999998 99999999999999999999999999998763
Q ss_pred C---CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 692 G---DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 692 ~---~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
. .....+||+.|||||++.... |+.++||||+||++|||++|+.||...
T Consensus 299 ~~~~~~~~~~GTp~YmAPEvl~~~~---------y~~~~DiWSlGvilyeml~G~~PF~~~ 350 (423)
T 4fie_A 299 KEVPRRKSLVGTPYWMAPELISRLP---------YGPEVDIWSLGIMVIEMVDGEPPYFNE 350 (423)
T ss_dssp SSCCCBCCCEECTTTCCHHHHTTCC---------BCTHHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred CCCccccccccCcCcCCHHHHCCCC---------CCcHHHHHHHHHHHHHHHHCCCCCCCc
Confidence 2 345678999999999886554 478999999999999999999999643
No 11
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=8.9e-47 Score=398.51 Aligned_cols=196 Identities=17% Similarity=0.157 Sum_probs=165.9
Q ss_pred CCCCccceeecCCcceEEEEEE----cCCcEEEEEEeecccc---CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL----EGGIPVVIKRIDLQSV---KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKF 606 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~----~~g~~vavK~l~~~~~---~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~ 606 (766)
++|+..+.||+|+||+||+|+. .+++.||||+++.... ...++.+|+++|++++|||||++++++.+ ++..|
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~-~~~~~ 102 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQT-EGKLY 102 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEE-TTEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEE-CCEEE
Confidence 4689999999999999999984 2478999999975432 24478999999999999999999997765 67899
Q ss_pred EEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchh
Q 004248 607 LVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSE 686 (766)
Q Consensus 607 lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~ 686 (766)
+|||||+||||.++|.+.+. +++.+...|+.||+.||+|||++ +||||||||+|||+++++++||+|||+
T Consensus 103 ivmEy~~gg~L~~~l~~~~~-------l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGl 172 (304)
T 3ubd_A 103 LILDFLRGGDLFTRLSKEVM-------FTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGL 172 (304)
T ss_dssp EEECCCTTCEEHHHHHHHCC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEESSEE
T ss_pred EEEEcCCCCCHHHHHHhcCC-------CCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEeccccc
Confidence 99999999999999986543 99999999999999999999998 999999999999999999999999999
Q ss_pred hhhcC---CCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 687 VCAQG---GDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 687 a~~~~---~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
|+... ....+.+||+.|||||.+.... ++.++||||+||++|||+||+.||...
T Consensus 173 a~~~~~~~~~~~~~~GT~~YmAPE~~~~~~---------y~~~~DiwSlGvilyemltG~~PF~~~ 229 (304)
T 3ubd_A 173 SKESIDHEKKAYSFCGTVEYMAPEVVNRRG---------HTQSADWWSFGVLMFEMLTGTLPFQGK 229 (304)
T ss_dssp EEC-----CCCCSCCCCGGGCCHHHHHTSC---------CCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ceeccCCCccccccccCcccCCHHHhccCC---------CCCCCcccchHHHHHHHHhCCCCCCCc
Confidence 98652 2345678999999999886554 478999999999999999999999643
No 12
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=3.7e-46 Score=398.51 Aligned_cols=192 Identities=20% Similarity=0.189 Sum_probs=166.7
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccCHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEeeC
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYM 612 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey~ 612 (766)
++|...++||+|+||+||+|+. .+|+.||||+++.... +.+|+++|++++|||||++++++.+ ++.+|+|||||
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~----~~~E~~il~~l~HpnIV~l~~~~~~-~~~~~ivmEy~ 132 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF----RVEELVACAGLSSPRIVPLYGAVRE-GPWVNIFMELL 132 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC----CTHHHHTTTTCCCTTBCCEEEEEEE-TTEEEEEECCC
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh----HHHHHHHHHhCCCCCCCcEEEEEEE-CCEEEEEEecc
Confidence 4577788999999999999994 6799999999976543 2469999999999999999998765 57899999999
Q ss_pred CCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCC-cEEeccchhhhhcC
Q 004248 613 PNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKF-EVRLGSLSEVCAQG 691 (766)
Q Consensus 613 ~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~-~~kl~DFG~a~~~~ 691 (766)
+||+|.++|++.+ .+++.+...|+.||+.||+|||++ +||||||||+||||+.++ ++||+|||+|+...
T Consensus 133 ~gg~L~~~l~~~~-------~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~ 202 (336)
T 4g3f_A 133 EGGSLGQLIKQMG-------CLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQ 202 (336)
T ss_dssp TTCBHHHHHHHHS-------SCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTTCEEC-
T ss_pred CCCcHHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCCCeEcc
Confidence 9999999998654 399999999999999999999998 999999999999999988 69999999998763
Q ss_pred CC--------CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 692 GD--------AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 692 ~~--------~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
.. ....+||+.|||||.+.+.. ++.++||||+||++|||+||+.||...
T Consensus 203 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~---------y~~~~DiwSlGvilyemltG~~Pf~~~ 259 (336)
T 4g3f_A 203 PDGLGKSLLTGDYIPGTETHMAPEVVMGKP---------CDAKVDIWSSCCMMLHMLNGCHPWTQY 259 (336)
T ss_dssp -----------CCCCCCGGGCCHHHHTTCC---------CCTHHHHHHHHHHHHHHHHSSCSSTTT
T ss_pred CCCcccceecCCccccCccccCHHHHCCCC---------CCcHHHHHHHHHHHHHHHHCcCCCCCC
Confidence 21 12347999999999987654 478999999999999999999999543
No 13
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=6e-46 Score=395.15 Aligned_cols=202 Identities=19% Similarity=0.231 Sum_probs=163.1
Q ss_pred CCCCccceeecCCcceEEEEEEcCCcEEEEEEeeccccCHHHHHHHHHHHhhcCCCCcccceeEEEecCC---cEEEEEe
Q 004248 534 GDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMEREN---EKFLVYK 610 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~---~~~lV~E 610 (766)
++|...++||+|+||+||+|++ +|+.||||+++........+.+|+..+.+++|||||+++|+|.+.+. ++|+|||
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~E 81 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSD 81 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccchhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEec
Confidence 3566778999999999999987 58899999997654333334556667788999999999999876432 5799999
Q ss_pred eCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCC-----CCCeEecCCCCCCeeeCCCCcEEeccch
Q 004248 611 YMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHEC-----TLPFVHRDVQASSILLDDKFEVRLGSLS 685 (766)
Q Consensus 611 y~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~-----~~~iiHrDlKp~NILl~~~~~~kl~DFG 685 (766)
||++|+|.++|+++ .++|+++.+++.|+|+||+|||+++ .++||||||||+|||+|+++++||+|||
T Consensus 82 y~~~gsL~~~l~~~--------~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFG 153 (303)
T 3hmm_A 82 YHEHGSLFDYLNRY--------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLG 153 (303)
T ss_dssp CCTTCBHHHHHHHC--------CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCT
T ss_pred CCCCCcHHHHHHhC--------CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCC
Confidence 99999999999753 3899999999999999999999862 4689999999999999999999999999
Q ss_pred hhhhcCCC-------CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCC
Q 004248 686 EVCAQGGD-------AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNL 747 (766)
Q Consensus 686 ~a~~~~~~-------~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~ 747 (766)
+|+..... ....+||+.|||||.+....... ...+++|+|||||||++|||+||+.||.
T Consensus 154 la~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~---~~~~~~k~DVwS~Gvvl~El~tg~~~~~ 219 (303)
T 3hmm_A 154 LAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMK---HFESFKRADIYAMGLVFWEIARRCSIGG 219 (303)
T ss_dssp TCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTT---CHHHHHHHHHHHHHHHHHHHHHTBCBTT
T ss_pred CCccccCCCCceeeecccccccccccCHHHhccccccc---CCccChhHhhhhHHHHHHHHHHCCCCCC
Confidence 99865322 12347999999999876432110 0016889999999999999999987763
No 14
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=3.5e-45 Score=439.14 Aligned_cols=349 Identities=28% Similarity=0.355 Sum_probs=276.4
Q ss_pred ccCCHHHHHHHHHHHHhCCCC--CCCCCCCCCCCCCccceeecCCCEEEEEcCCCCcCCCCC---CCCcc----------
Q 004248 44 RLSSRTELAALFELRSSLGLR--RRDWPRKVDPCLVWNGVRCQNGSVVGINISGFRRTRLGS---QNPRF---------- 108 (766)
Q Consensus 44 ~~~~~~~~~aLl~~k~~l~~~--~~~W~~~~~~C~~W~gv~C~~~~v~~l~l~~~~~~~~~~---~~~~~---------- 108 (766)
..+.++|++||++||+++.++ .++|+.++| ||.|.||+|++++|++++|++.... |. +++.+
T Consensus 7 ~~~~~~~~~all~~k~~~~~~~~l~~W~~~~~-~C~w~gv~C~~~~v~~L~L~~~~l~--g~~~~l~~~l~~L~~L~~l~ 83 (768)
T 3rgz_A 7 SQSLYREIHQLISFKDVLPDKNLLPDWSSNKN-PCTFDGVTCRDDKVTSIDLSSKPLN--VGFSAVSSSLLSLTGLESLF 83 (768)
T ss_dssp -CCHHHHHHHHHHHHTTCSCTTSSTTCCTTSC-GGGSTTEEEETTEEEEEECTTSCCC--EEHHHHHHHTTTCTTCCEEE
T ss_pred ccCCHHHHHHHHHHHhhCCCcccccCCCCCCC-CcCCcceEECCCcEEEEECCCCCcC--CccCccChhHhccCcccccC
Confidence 334678999999999999753 589986655 5599999999899999999976432 21 11100
Q ss_pred --------chhhhccCCCCCEEecCCCCCCCCCch--hhhhCCCCCCEEEccCCCCCccCCccc-CCCCCCcEEEeecCc
Q 004248 109 --------AADALVNLTHLASFNASRFLLPGSIPD--WLGQQLPTLQALDLRSCSISGVIPFSL-GNLTNLTSLYLSDNG 177 (766)
Q Consensus 109 --------~~~~l~~l~~L~~L~ls~n~l~g~ip~--~~~~~l~~L~~L~Ls~N~l~g~~p~~l-~~l~~L~~L~Ls~N~ 177 (766)
.+..+.++++|++|++++|.+.|.+|. .++. +++|++|||++|.+++.+|..+ .++++|++|+|++|+
T Consensus 84 ~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~-l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~ 162 (768)
T 3rgz_A 84 LSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGS-CSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANS 162 (768)
T ss_dssp CTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGG-CTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSC
T ss_pred CcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhC-CCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCCc
Confidence 024678889999999999999998888 7766 9999999999999998888776 889999999999999
Q ss_pred CCCCCCcc---ccCCCCCCEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCCCCCCCccEEEccCCCCCCCC
Q 004248 178 LTGTIPSS---LGQLSVLSVLDLSRNSLTGNIPTSFGLLKNLSSLDISSNYLTGSIPPGLGTLSKLQYLNVSNNSLASSI 254 (766)
Q Consensus 178 l~~~~p~~---l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~ 254 (766)
+++..|.. +.++++|++|++++|.+++.+|. ..+++|++|+|++|.+++.+|. ++++++|++|+|++|++++.+
T Consensus 163 l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~--~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~~ 239 (768)
T 3rgz_A 163 ISGANVVGWVLSDGCGELKHLAISGNKISGDVDV--SRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDF 239 (768)
T ss_dssp CEEETHHHHHHTTCCTTCCEEECCSSEEESCCBC--TTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSSCCCSCH
T ss_pred cCCcCChhhhhhccCCCCCEEECCCCcccccCCc--ccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCCcCCCcc
Confidence 98887776 78888888888888888876654 7888888888888888887777 888888888898888888888
Q ss_pred ccccCCCCCCCEEEccCCcCCccCCcccCCCCCCCEEEccCccCccccCCCccCCCCcccEEEccCCCCCCCCCcccCCC
Q 004248 255 PAQLGDLDSLVDLDLSMNSLSGSVPSELRGLRSLQKFVIGNNFLSGNLSVNLFPTVSQLQIIVLRQNGFTGPPPDVLWSM 334 (766)
Q Consensus 255 p~~l~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l 334 (766)
|..++++++|++|++++|++++.+|.. .+++|++|++++|.++|.+|..++..+++|+.|+|++|++++.+|..+.++
T Consensus 240 ~~~l~~l~~L~~L~Ls~n~l~~~~~~~--~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l 317 (768)
T 3rgz_A 240 SRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSC 317 (768)
T ss_dssp HHHTTTCSSCCEEECCSSCCEESCCCC--CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGC
T ss_pred cHHHhcCCCCCEEECCCCcccCccCcc--ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcC
Confidence 888888888888888888888877765 788888888888888888887775556788888888888888888888888
Q ss_pred CCCCEEEccCCCCCCCCCcccccCCCCCcEEEccCCcCccCCCcCC---C-CCCEEeccCCcCccccChhh
Q 004248 335 PQLRLLDISRNNFTGPLPNSRSNVNTSTVELNISQNMFYGGLTPVL---G-RFRLVDLSGNYFEGRVPEYV 401 (766)
Q Consensus 335 ~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~L~ls~N~l~g~~~~~l---~-~l~~ldLs~N~l~g~~p~~~ 401 (766)
++|++|++++|+++|.+|...+..+++|++|++++|.+.|.+|..+ . +|+.|||++|+++|.+|..+
T Consensus 318 ~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~ 388 (768)
T 3rgz_A 318 SLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNL 388 (768)
T ss_dssp TTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTT
T ss_pred CCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhh
Confidence 8888888888888877776545566777777777777777666542 2 56666666666666665544
No 15
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=5e-45 Score=394.33 Aligned_cols=215 Identities=17% Similarity=0.217 Sum_probs=177.4
Q ss_pred ccHHHHHHHhCCCCccceeecCCcceEEEEEEc------CCcEEEEEEeeccccC--HHHHHHHHHHHhhcCC-CCcccc
Q 004248 524 FTYQQLLAATGDFSDANLIKNGHSGDLFRGILE------GGIPVVIKRIDLQSVK--TEAYLLELDFFSKVSH-ARLVPL 594 (766)
Q Consensus 524 ~~~~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~--~~~~~~E~~~l~~l~H-~niv~l 594 (766)
++..+++-..++|+..+.||+|+||+||+|+.. .++.||||++...... .++|.+|+++|++++| ||||++
T Consensus 54 ~~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l 133 (353)
T 4ase_A 54 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 133 (353)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CCCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEE
Confidence 344455555678999999999999999999853 2468999999765433 5679999999999965 899999
Q ss_pred eeEEEecCCcEEEEEeeCCCCChhhhhhccCCC---------CCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecC
Q 004248 595 LGHCMERENEKFLVYKYMPNGDLSSSLYRKTNT---------EDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRD 665 (766)
Q Consensus 595 ~~~~~~~~~~~~lV~Ey~~~GsL~~~l~~~~~~---------~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrD 665 (766)
+|+|.+.++.+|+|||||++|+|.++|+..... ......++|.++..|+.|||+||+|||++ +|||||
T Consensus 134 ~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHRD 210 (353)
T 4ase_A 134 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRD 210 (353)
T ss_dssp EEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSC
T ss_pred EEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecCc
Confidence 999876556789999999999999999764321 01124589999999999999999999998 999999
Q ss_pred CCCCCeeeCCCCcEEeccchhhhhcCCC-----CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHh
Q 004248 666 VQASSILLDDKFEVRLGSLSEVCAQGGD-----AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAI 740 (766)
Q Consensus 666 lKp~NILl~~~~~~kl~DFG~a~~~~~~-----~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ell 740 (766)
|||+|||+++++.+||+|||+|+..... .....||..|||||.+.... ++.++|||||||++|||+
T Consensus 211 LK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~---------y~~ksDVwS~Gv~l~El~ 281 (353)
T 4ase_A 211 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRV---------YTIQSDVWSFGVLLWEIF 281 (353)
T ss_dssp CSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCC---------CCHHHHHHHHHHHHHHHT
T ss_pred cCccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCC---------CCCcccEeehHHHHHHHH
Confidence 9999999999999999999999876322 12356889999999886544 588999999999999999
Q ss_pred c-CCCCCCCCc
Q 004248 741 F-NNHLNLSSR 750 (766)
Q Consensus 741 t-G~~p~~~~~ 750 (766)
| |+.||....
T Consensus 282 t~G~~Pf~~~~ 292 (353)
T 4ase_A 282 SLGASPYPGVK 292 (353)
T ss_dssp TTSCCSSTTCC
T ss_pred hCCCCCCCCCC
Confidence 8 999996443
No 16
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=2.7e-44 Score=380.76 Aligned_cols=195 Identities=21% Similarity=0.299 Sum_probs=158.7
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC--HHHHHHHHHHHhhcCCCCcccceeEEEecCC-------
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK--TEAYLLELDFFSKVSHARLVPLLGHCMEREN------- 603 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~--~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~------- 603 (766)
++|+..+.||+|+||+||+|+. .+|+.||||+++..... .+++.+|+++|++++|||||++++++.+.+.
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 4688999999999999999994 67999999999754432 5679999999999999999999998765322
Q ss_pred ----cEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcE
Q 004248 604 ----EKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEV 679 (766)
Q Consensus 604 ----~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~ 679 (766)
..|+|||||++|+|.+++.++.. ....++...+.|+.||+.||+|||++ +||||||||+|||++.++.+
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~----~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~v 157 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRCT----IEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVV 157 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCCS----GGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCE
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcCC----CChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcE
Confidence 36999999999999999976542 12367788899999999999999998 99999999999999999999
Q ss_pred EeccchhhhhcCCC---------------CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCC
Q 004248 680 RLGSLSEVCAQGGD---------------AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNH 744 (766)
Q Consensus 680 kl~DFG~a~~~~~~---------------~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~ 744 (766)
||+|||+|+..... .+..+||+.|||||.+.+.. ++.++|||||||++|||++
T Consensus 158 Kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~---------y~~~~DiwSlGvilyell~--- 225 (299)
T 4g31_A 158 KVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNS---------YSHKVDIFSLGLILFELLY--- 225 (299)
T ss_dssp EECCCCCC--------------------------CCCTTSCHHHHTTCC---------CCTHHHHHHHHHHHHHHHS---
T ss_pred EEccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCC---------CCCHHHHHHHHHHHHHHcc---
Confidence 99999999875321 12357999999999886554 4789999999999999997
Q ss_pred CCC
Q 004248 745 LNL 747 (766)
Q Consensus 745 p~~ 747 (766)
||.
T Consensus 226 Pf~ 228 (299)
T 4g31_A 226 PFS 228 (299)
T ss_dssp CCS
T ss_pred CCC
Confidence 774
No 17
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=1e-42 Score=408.62 Aligned_cols=352 Identities=20% Similarity=0.314 Sum_probs=298.0
Q ss_pred HHHHHHHHHHHHhCCCC-----------CCCCCCCCCCCCCc---cceeec-CCCEEEEEcCCCCcCCCCCCCCccchhh
Q 004248 48 RTELAALFELRSSLGLR-----------RRDWPRKVDPCLVW---NGVRCQ-NGSVVGINISGFRRTRLGSQNPRFAADA 112 (766)
Q Consensus 48 ~~~~~aLl~~k~~l~~~-----------~~~W~~~~~~C~~W---~gv~C~-~~~v~~l~l~~~~~~~~~~~~~~~~~~~ 112 (766)
..|+.||.++++++... ..+|+.+.| ||.| .||+|+ .|+|++|+|++.+. .|.++ .+
T Consensus 29 ~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~~~-~c~w~~~~GV~C~~~~~V~~L~L~~~~l--~g~lp-----~~ 100 (636)
T 4eco_A 29 IKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFNKE-LDMWGAQPGVSLNSNGRVTGLSLEGFGA--SGRVP-----DA 100 (636)
T ss_dssp HHHHHHHHHHHHHTTGGGCCCCC------CCCCCSSC-GGGTTCCTTEEECTTCCEEEEECTTSCC--EEEEC-----GG
T ss_pred HHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCCCC-cccccCCCCeEEcCCCCEEEEEecCccc--CCcCC-----hH
Confidence 46999999999998532 137987665 4589 999996 58999999998653 24444 37
Q ss_pred hccCCCCCEEecCCCCC---------------------------------------------------------------
Q 004248 113 LVNLTHLASFNASRFLL--------------------------------------------------------------- 129 (766)
Q Consensus 113 l~~l~~L~~L~ls~n~l--------------------------------------------------------------- 129 (766)
+++|++|++|++++|.+
T Consensus 101 l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~ 180 (636)
T 4eco_A 101 IGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSR 180 (636)
T ss_dssp GGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCC
T ss_pred HhcCccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCccccccccccc
Confidence 89999999999998843
Q ss_pred ---------------CCCCchhhhhCCCCCCEEEccCCCCCcc-----------------CCcccC--CCCCCcEEEeec
Q 004248 130 ---------------PGSIPDWLGQQLPTLQALDLRSCSISGV-----------------IPFSLG--NLTNLTSLYLSD 175 (766)
Q Consensus 130 ---------------~g~ip~~~~~~l~~L~~L~Ls~N~l~g~-----------------~p~~l~--~l~~L~~L~Ls~ 175 (766)
+| ||+.+++ +++|++|+|++|.++|. +|..++ ++++|++|+|++
T Consensus 181 ~~l~~l~l~~~~n~l~~-ip~~l~~-l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~ 258 (636)
T 4eco_A 181 ITLKDTQIGQLSNNITF-VSKAVMR-LTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYN 258 (636)
T ss_dssp CCCCTTTTTCCSCEEEE-ECGGGGG-CTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEEC
T ss_pred cchhhhhhccccCCCcc-CCHHHhc-ccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecC
Confidence 35 8888876 99999999999999996 999999 999999999999
Q ss_pred CcCCCCCCccccCCCCCCEEEccCCC-CCC-CCCcccCCC------CCCCEEeccCCcCCCCCCC--CCCCCCCccEEEc
Q 004248 176 NGLTGTIPSSLGQLSVLSVLDLSRNS-LTG-NIPTSFGLL------KNLSSLDISSNYLTGSIPP--GLGTLSKLQYLNV 245 (766)
Q Consensus 176 N~l~~~~p~~l~~L~~L~~L~Ls~N~-l~~-~~p~~~~~l------~~L~~L~Ls~N~l~~~~p~--~l~~l~~L~~L~L 245 (766)
|++.+.+|..++++++|++|+|++|+ ++| .+|..++++ ++|+.|+|++|+++ .+|. .++++++|++|++
T Consensus 259 n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L 337 (636)
T 4eco_A 259 CPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLEC 337 (636)
T ss_dssp CTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEEC
T ss_pred CcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeC
Confidence 99999999999999999999999998 998 899988876 99999999999999 8998 8999999999999
Q ss_pred cCCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccCCCCC-CCEEEccCccCccccCCCccCCC--CcccEEEccCCC
Q 004248 246 SNNSLASSIPAQLGDLDSLVDLDLSMNSLSGSVPSELRGLRS-LQKFVIGNNFLSGNLSVNLFPTV--SQLQIIVLRQNG 322 (766)
Q Consensus 246 s~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~-L~~L~ls~N~l~g~~~~~~~~~l--~~L~~L~L~~N~ 322 (766)
++|+++|.+| .++++++|++|++++|+++ .+|..+.++++ |++|++++|.++ .+|..+ ... ++|+.|++++|+
T Consensus 338 ~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~-~~~~l~~L~~L~Ls~N~ 413 (636)
T 4eco_A 338 LYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIF-DAKSVSVMSAIDFSYNE 413 (636)
T ss_dssp CSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCC-CTTCSSCEEEEECCSSC
T ss_pred cCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhh-hhcccCccCEEECcCCc
Confidence 9999998999 8999999999999999998 88989999999 999999999998 677643 443 489999999999
Q ss_pred CCCCCCcccC-------CCCCCCEEEccCCCCCCCCCcccccCCCCCcEEEccCCcCccCCCcC-CC----------CCC
Q 004248 323 FTGPPPDVLW-------SMPQLRLLDISRNNFTGPLPNSRSNVNTSTVELNISQNMFYGGLTPV-LG----------RFR 384 (766)
Q Consensus 323 l~~~~p~~l~-------~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~L~ls~N~l~g~~~~~-l~----------~l~ 384 (766)
+++.+|..+. .+++|++|+|++|+++ .+|...+..+++|+.|++++|.+. .+|.. +. +|+
T Consensus 414 l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~~~~~~~~l~~L~ 491 (636)
T 4eco_A 414 IGSVDGKNFDPLDPTPFKGINVSSINLSNNQIS-KFPKELFSTGSPLSSINLMGNMLT-EIPKNSLKDENENFKNTYLLT 491 (636)
T ss_dssp TTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCC-SCCTHHHHTTCCCSEEECCSSCCS-BCCSSSSEETTEECTTGGGCC
T ss_pred CCCcchhhhcccccccccCCCCCEEECcCCccC-cCCHHHHccCCCCCEEECCCCCCC-CcCHHHhccccccccccCCcc
Confidence 9999998888 7889999999999998 677666566788999999999988 66643 21 789
Q ss_pred EEeccCCcCccccChhhh-hccc-----CCCcccCCCCC
Q 004248 385 LVDLSGNYFEGRVPEYVH-SNAS-----SLDSNCLQNVP 417 (766)
Q Consensus 385 ~ldLs~N~l~g~~p~~~~-~~~~-----~l~~n~l~~~~ 417 (766)
.|||++|+++ .+|..+. ..+. ++++|.+.+.|
T Consensus 492 ~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~ip 529 (636)
T 4eco_A 492 SIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSKFP 529 (636)
T ss_dssp EEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSSCC
T ss_pred EEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCCcC
Confidence 9999999998 6787664 1221 45667776644
No 18
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=2.5e-42 Score=413.12 Aligned_cols=352 Identities=19% Similarity=0.281 Sum_probs=275.7
Q ss_pred CCHHHHHHHHHHHHhCCCCCCCCCCCC-----CCC-CCc------------cceeec-CCCEEEEEcCCCCcCCCCCCCC
Q 004248 46 SSRTELAALFELRSSLGLRRRDWPRKV-----DPC-LVW------------NGVRCQ-NGSVVGINISGFRRTRLGSQNP 106 (766)
Q Consensus 46 ~~~~~~~aLl~~k~~l~~~~~~W~~~~-----~~C-~~W------------~gv~C~-~~~v~~l~l~~~~~~~~~~~~~ 106 (766)
+..+|++||++||+++.++ +|+.+. +|| |.| .||+|+ +++|++|+|++.+. .|.++
T Consensus 266 ~~~~d~~ALl~~k~~l~~~--~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~~~~V~~L~Ls~~~L--~G~ip- 340 (876)
T 4ecn_A 266 EYIKDYKALKAIWEALDGK--NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDNNGRVTGLSLAGFGA--KGRVP- 340 (876)
T ss_dssp HHHHHHHHHHHHHHHTTGG--GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECTTSCEEEEECTTTCC--EEEEC-
T ss_pred cchHHHHHHHHHHHHcCCC--CCCcCCCcccccCCccccccccccccccCcCceEecCCCCEEEEECccCCC--CCcCc-
Confidence 3567999999999999764 897554 552 699 999997 68999999998654 24444
Q ss_pred ccchhhhccCCCCCEEec-CCCCCCCC-----------------------------------------------------
Q 004248 107 RFAADALVNLTHLASFNA-SRFLLPGS----------------------------------------------------- 132 (766)
Q Consensus 107 ~~~~~~l~~l~~L~~L~l-s~n~l~g~----------------------------------------------------- 132 (766)
..+++|++|+.|+| ++|.+.|.
T Consensus 341 ----~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~ 416 (876)
T 4ecn_A 341 ----DAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKP 416 (876)
T ss_dssp ----GGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCC
T ss_pred ----hHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCccccc
Confidence 37889999999999 77755444
Q ss_pred -----------------------CchhhhhCCCCCCEEEccCCCCCc-----------------cCCcccC--CCCCCcE
Q 004248 133 -----------------------IPDWLGQQLPTLQALDLRSCSISG-----------------VIPFSLG--NLTNLTS 170 (766)
Q Consensus 133 -----------------------ip~~~~~~l~~L~~L~Ls~N~l~g-----------------~~p~~l~--~l~~L~~ 170 (766)
||+.++. +++|++|+|++|.++| .+|..++ ++++|++
T Consensus 417 i~~~~~l~l~~l~l~~~~N~L~~IP~~l~~-L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~ 495 (876)
T 4ecn_A 417 IKKDSRISLKDTQIGNLTNRITFISKAIQR-LTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTD 495 (876)
T ss_dssp CCCCCCCCCCTTTTTCCSCEEEEECGGGGG-CTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCE
T ss_pred cccccccchhhceeccccCcccchhHHHhc-CCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCE
Confidence 7888876 9999999999999998 4899988 9999999
Q ss_pred EEeecCcCCCCCCccccCCCCCCEEEccCCC-CCC-CCCcccCCCC-------CCCEEeccCCcCCCCCCC--CCCCCCC
Q 004248 171 LYLSDNGLTGTIPSSLGQLSVLSVLDLSRNS-LTG-NIPTSFGLLK-------NLSSLDISSNYLTGSIPP--GLGTLSK 239 (766)
Q Consensus 171 L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~-l~~-~~p~~~~~l~-------~L~~L~Ls~N~l~~~~p~--~l~~l~~ 239 (766)
|+|++|++.+.+|..|+++++|++|+|++|+ ++| .+|..+++++ +|+.|+|++|.++ .+|. .++++++
T Consensus 496 L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~ 574 (876)
T 4ecn_A 496 VELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVK 574 (876)
T ss_dssp EEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTT
T ss_pred EECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCC
Confidence 9999999999999999999999999999998 988 7887666554 9999999999998 8888 8999999
Q ss_pred ccEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccCCCCC-CCEEEccCccCccccCCCccCCCC--cccEE
Q 004248 240 LQYLNVSNNSLASSIPAQLGDLDSLVDLDLSMNSLSGSVPSELRGLRS-LQKFVIGNNFLSGNLSVNLFPTVS--QLQII 316 (766)
Q Consensus 240 L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~-L~~L~ls~N~l~g~~~~~~~~~l~--~L~~L 316 (766)
|+.|+|++|+++ .+| .++++++|+.|+|++|+++ .+|..+.++++ |+.|++++|.++ .+|.. +..++ +|+.|
T Consensus 575 L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~-~~~~~~~~L~~L 649 (876)
T 4ecn_A 575 LGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNI-FNAKSVYVMGSV 649 (876)
T ss_dssp CCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSC-CCTTCSSCEEEE
T ss_pred CCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchh-hhccccCCCCEE
Confidence 999999999998 788 8889999999999999998 88888988988 999999999988 66643 34443 38888
Q ss_pred EccCCCCCCCCCccc---C--CCCCCCEEEccCCCCCCCCCcccccCCCCCcEEEccCCcCccCCCcCC-----------
Q 004248 317 VLRQNGFTGPPPDVL---W--SMPQLRLLDISRNNFTGPLPNSRSNVNTSTVELNISQNMFYGGLTPVL----------- 380 (766)
Q Consensus 317 ~L~~N~l~~~~p~~l---~--~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~L~ls~N~l~g~~~~~l----------- 380 (766)
+|++|++++.+|... . .+++|+.|+|++|+++ .+|...+..+++|+.|+|++|.+. .+|...
T Consensus 650 ~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~-~lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl 727 (876)
T 4ecn_A 650 DFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQ-KFPTELFATGSPISTIILSNNLMT-SIPENSLKPKDGNYKNT 727 (876)
T ss_dssp ECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCC-SCCHHHHHTTCCCSEEECCSCCCS-CCCTTSSSCTTSCCTTG
T ss_pred ECcCCcCCCccccchhhhccccCCCcCEEEccCCcCC-ccCHHHHccCCCCCEEECCCCcCC-ccChHHhcccccccccc
Confidence 888888887665432 2 3347777777777777 566555445667777777777776 555321
Q ss_pred CCCCEEeccCCcCccccChhhh-hccc-----CCCcccCCCC
Q 004248 381 GRFRLVDLSGNYFEGRVPEYVH-SNAS-----SLDSNCLQNV 416 (766)
Q Consensus 381 ~~l~~ldLs~N~l~g~~p~~~~-~~~~-----~l~~n~l~~~ 416 (766)
++|+.|+|++|+++ .+|..+. ..+. ++++|.+.+.
T Consensus 728 ~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~l 768 (876)
T 4ecn_A 728 YLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSSF 768 (876)
T ss_dssp GGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSSC
T ss_pred CCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCcc
Confidence 16777777777777 5666553 1211 3455665554
No 19
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.2e-43 Score=388.03 Aligned_cols=196 Identities=18% Similarity=0.210 Sum_probs=169.5
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC---HHHHHHHHHHHhhcCCCCcccceeEEEe-----cCCc
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK---TEAYLLELDFFSKVSHARLVPLLGHCME-----RENE 604 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~---~~~~~~E~~~l~~l~H~niv~l~~~~~~-----~~~~ 604 (766)
++|+..+.||+|+||+||+|+. .+|+.||||+++..... .+++.+|+++|++++|||||++++++.. ..+.
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 5699999999999999999994 67999999999754332 4578999999999999999999997643 2357
Q ss_pred EEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccc
Q 004248 605 KFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684 (766)
Q Consensus 605 ~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DF 684 (766)
+|+|||||+ |+|.+++.+.+ .+++.++..|+.||+.||+|||++ +||||||||+|||++.++.+||+||
T Consensus 134 ~~ivmE~~~-g~L~~~i~~~~-------~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DF 202 (398)
T 4b99_A 134 VYVVLDLME-SDLHQIIHSSQ-------PLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDF 202 (398)
T ss_dssp EEEEEECCS-EEHHHHHTSSS-------CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCC
T ss_pred EEEEEeCCC-CCHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeec
Confidence 899999996 78999997654 499999999999999999999998 9999999999999999999999999
Q ss_pred hhhhhcC-------CCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 685 SEVCAQG-------GDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 685 G~a~~~~-------~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
|+|+... ....+.+||++|+|||++.+..+ ++.++||||+||++|||+||+.||..
T Consensus 203 Gla~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~--------~~~~~DiWSlG~il~ell~G~~pF~g 265 (398)
T 4b99_A 203 GMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHE--------YTQAIDLWSVGCIFGEMLARRQLFPG 265 (398)
T ss_dssp TTCBCC-------CCCCCSSCCCCTTCCHHHHTTCSC--------CCTHHHHHHHHHHHHHHHHTSCSSCC
T ss_pred ceeeecccCccccccccccceeChHhcCHHHhcCCCC--------CCChhheehhHHHHHHHHHCCCCCCC
Confidence 9998652 12345689999999998765443 57899999999999999999999954
No 20
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=1.2e-42 Score=372.41 Aligned_cols=289 Identities=30% Similarity=0.480 Sum_probs=243.7
Q ss_pred cCCHHHHHHHHHHHHhCCCC--CCCCCCCCCCCCC--ccceeecC----CCEEEEEcCCCCcCCCCCCCCccchhhhccC
Q 004248 45 LSSRTELAALFELRSSLGLR--RRDWPRKVDPCLV--WNGVRCQN----GSVVGINISGFRRTRLGSQNPRFAADALVNL 116 (766)
Q Consensus 45 ~~~~~~~~aLl~~k~~l~~~--~~~W~~~~~~C~~--W~gv~C~~----~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l 116 (766)
.|.++|++||++||+++.++ .++|..+.||| . |.||+|+. ++|+.+++
T Consensus 2 ~c~~~~~~aL~~~k~~~~~~~~l~~W~~~~~~C-~~~w~gv~C~~~~~~~~l~~L~L----------------------- 57 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLGNPTTLSSWLPTTDCC-NRTWLGVLCDTDTQTYRVNNLDL----------------------- 57 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTCCGGGTTCCTTSCTT-TTCSTTEEECCSSSCCCEEEEEE-----------------------
T ss_pred CCCHHHHHHHHHHHHhcCCcccccCCCCCCCCC-cCCCcceEeCCCCCCceEEEEEC-----------------------
Confidence 48999999999999999753 47898766655 6 99999973 45555554
Q ss_pred CCCCEEecCCCCCCC--CCchhhhhCCCCCCEEEccC-CCCCccCCcccCCCCCCcEEEeecCcCCCCCCccccCCCCCC
Q 004248 117 THLASFNASRFLLPG--SIPDWLGQQLPTLQALDLRS-CSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPSSLGQLSVLS 193 (766)
Q Consensus 117 ~~L~~L~ls~n~l~g--~ip~~~~~~l~~L~~L~Ls~-N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~ 193 (766)
++|.+.| .+|+.+.. +++|++|+|++ |.+.+.+|..|+++++|++|+|++|++++.+|..+.++++|+
T Consensus 58 --------~~~~l~~~~~~~~~l~~-l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~ 128 (313)
T 1ogq_A 58 --------SGLNLPKPYPIPSSLAN-LPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLV 128 (313)
T ss_dssp --------ECCCCSSCEECCGGGGG-CTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCC
T ss_pred --------CCCCccCCcccChhHhC-CCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCC
Confidence 4566667 78888766 89999999994 888888999999999999999999999888899999999999
Q ss_pred EEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCCCCCC-CccEEEccCCCCCCCCccccCCCCCCCEEEccCC
Q 004248 194 VLDLSRNSLTGNIPTSFGLLKNLSSLDISSNYLTGSIPPGLGTLS-KLQYLNVSNNSLASSIPAQLGDLDSLVDLDLSMN 272 (766)
Q Consensus 194 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~-~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N 272 (766)
+|+|++|++++.+|..|..+++|++|+|++|.+++.+|..+++++ +|++|++++|++++.+|..+..++ |++|++++|
T Consensus 129 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N 207 (313)
T 1ogq_A 129 TLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRN 207 (313)
T ss_dssp EEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSS
T ss_pred EEeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCC
Confidence 999999999888999999999999999999999888898888888 899999999999888898888887 999999999
Q ss_pred cCCccCCcccCCCCCCCEEEccCccCccccCCCccCCCCcccEEEccCCCCCCCCCcccCCCCCCCEEEccCCCCCCCCC
Q 004248 273 SLSGSVPSELRGLRSLQKFVIGNNFLSGNLSVNLFPTVSQLQIIVLRQNGFTGPPPDVLWSMPQLRLLDISRNNFTGPLP 352 (766)
Q Consensus 273 ~l~g~~p~~l~~l~~L~~L~ls~N~l~g~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p 352 (766)
++++.+|..+..+++|+.|++++|.+++.++. +..+++|+.|+|++|++++.+|..+..+++|++|+|++|+++|.+|
T Consensus 208 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~--~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip 285 (313)
T 1ogq_A 208 MLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK--VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP 285 (313)
T ss_dssp EEEECCGGGCCTTSCCSEEECCSSEECCBGGG--CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECC
T ss_pred cccCcCCHHHhcCCCCCEEECCCCceeeecCc--ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCC
Confidence 99988888999999999999999999877665 5678889999999999998899999999999999999999998888
Q ss_pred cccccCCCCCcEEEccCCc
Q 004248 353 NSRSNVNTSTVELNISQNM 371 (766)
Q Consensus 353 ~~~~~~~~~l~~L~ls~N~ 371 (766)
.. ..+++++.+++++|.
T Consensus 286 ~~--~~l~~L~~l~l~~N~ 302 (313)
T 1ogq_A 286 QG--GNLQRFDVSAYANNK 302 (313)
T ss_dssp CS--TTGGGSCGGGTCSSS
T ss_pred CC--ccccccChHHhcCCC
Confidence 64 334455555555554
No 21
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=1.8e-43 Score=384.49 Aligned_cols=205 Identities=13% Similarity=0.128 Sum_probs=171.9
Q ss_pred HHhCCCCccceeecCCcceEEEEEE----cCCcEEEEEEeeccccCHHHHHHHHHHHhhc-CCCCcccceeEEEecCCcE
Q 004248 531 AATGDFSDANLIKNGHSGDLFRGIL----EGGIPVVIKRIDLQSVKTEAYLLELDFFSKV-SHARLVPLLGHCMERENEK 605 (766)
Q Consensus 531 ~~~~~~~~~~~ig~G~~g~Vy~~~~----~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~ 605 (766)
+..++|+..++||+|+||+||+|+. .+++.||||++.... ...++.+|+++|+++ +|||||++++++.+ ++..
T Consensus 18 ~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~-~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~-~~~~ 95 (361)
T 4f9c_A 18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS-HPIRIAAELQCLTVAGGQDNVMGVKYCFRK-NDHV 95 (361)
T ss_dssp GGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS-CHHHHHHHHHHHHHTCSBTTBCCCSEEEEE-TTEE
T ss_pred CccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc-CHHHHHHHHHHHHHhcCCCCCceEEEEEEE-CCEE
Confidence 4567899999999999999999984 247899999986543 355789999999998 69999999997665 6789
Q ss_pred EEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCC-CcEEeccc
Q 004248 606 FLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDK-FEVRLGSL 684 (766)
Q Consensus 606 ~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~-~~~kl~DF 684 (766)
|+|||||++|+|.+++. .+++.+...|+.|++.||+|||++ +||||||||+|||++.+ +.+||+||
T Consensus 96 ~lvmE~~~g~~L~~~~~----------~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~kl~DF 162 (361)
T 4f9c_A 96 VIAMPYLEHESFLDILN----------SLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYALVDF 162 (361)
T ss_dssp EEEEECCCCCCHHHHHT----------TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCC
T ss_pred EEEEeCCCcccHHHHHc----------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEEECcC
Confidence 99999999999999983 288999999999999999999998 99999999999999977 89999999
Q ss_pred hhhhhcCCC-------------------------------CccceeeecccCCCCCCCCceeeeeeeeecccccceecch
Q 004248 685 SEVCAQGGD-------------------------------AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHG 733 (766)
Q Consensus 685 G~a~~~~~~-------------------------------~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~G 733 (766)
|+|+..... .++.+||++|+|||.+.+... ++.++||||+|
T Consensus 163 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~--------y~~~~DiWSlG 234 (361)
T 4f9c_A 163 GLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPN--------QTTAIDMWSAG 234 (361)
T ss_dssp TTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSC--------CCTHHHHHHHH
T ss_pred CCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCC--------CCCccchhhhH
Confidence 999754211 223579999999998765432 57899999999
Q ss_pred HHHHHHhcCCCCCCCCcccccccee
Q 004248 734 NPLFSAIFNNHLNLSSRFGVKQQTT 758 (766)
Q Consensus 734 vvl~elltG~~p~~~~~~~~~~~~~ 758 (766)
|++|||+||+.||+.++...+++..
T Consensus 235 ~il~ell~G~~Pf~~~~~~~~~l~~ 259 (361)
T 4f9c_A 235 VIFLSLLSGRYPFYKASDDLTALAQ 259 (361)
T ss_dssp HHHHHHHHTCSSSSCCSSHHHHHHH
T ss_pred HHHHHHHHCCCCCCCCCCHHHHHHH
Confidence 9999999999999766655444433
No 22
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=1e-42 Score=398.60 Aligned_cols=197 Identities=21% Similarity=0.220 Sum_probs=169.5
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeecccc----CHHHHH---HHHHHHhhcCCCCcccceeEEEecCCcE
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV----KTEAYL---LELDFFSKVSHARLVPLLGHCMERENEK 605 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~----~~~~~~---~E~~~l~~l~H~niv~l~~~~~~~~~~~ 605 (766)
++|+..++||+|+||+||+|+. .+|+.||||++++... ....+. +|+++++.++|||||++++++.+ ++.+
T Consensus 189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~-~~~l 267 (689)
T 3v5w_A 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHT-PDKL 267 (689)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEEC-SSEE
T ss_pred HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEE-CCEE
Confidence 5799999999999999999994 6799999999975432 123333 44677788899999999997655 6789
Q ss_pred EEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccch
Q 004248 606 FLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLS 685 (766)
Q Consensus 606 ~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG 685 (766)
|+|||||+||+|.++|.+.+. +++.....|+.||+.||+|||++ +||||||||+|||||.+|++||+|||
T Consensus 268 ylVmEy~~GGdL~~~l~~~~~-------l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL~DFG 337 (689)
T 3v5w_A 268 SFILDLMNGGDLHYHLSQHGV-------FSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLG 337 (689)
T ss_dssp EEEECCCCSCBHHHHHHHHCC-------CCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEECCCT
T ss_pred EEEEecCCCCcHHHHHHhcCC-------CCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEecccc
Confidence 999999999999999986543 99999999999999999999998 99999999999999999999999999
Q ss_pred hhhhcC-CCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 686 EVCAQG-GDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 686 ~a~~~~-~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
+|+... ....+.+||+.|+|||++..+.. |+.++||||+||++|||+||+.||...
T Consensus 338 lA~~~~~~~~~t~~GTp~YmAPEvl~~~~~--------y~~~vDiWSLGvilYEmLtG~~PF~~~ 394 (689)
T 3v5w_A 338 LACDFSKKKPHASVGTHGYMAPEVLQKGVA--------YDSSADWFSLGCMLFKLLRGHSPFRQH 394 (689)
T ss_dssp TCEECSSCCCCSCCSCGGGCCHHHHSTTCC--------CCTHHHHHHHHHHHHHHHHSSCTTCGG
T ss_pred eeeecCCCCCCCccCCcCccCHHHHhCCCC--------CCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 998764 34566799999999998864321 478999999999999999999999643
No 23
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=9.4e-41 Score=384.74 Aligned_cols=197 Identities=16% Similarity=0.193 Sum_probs=172.8
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC-HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEee
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK-TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKY 611 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~-~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey 611 (766)
++|+..+.||+|+||+||+|+. .+|+.||||++...... .+.+.+|+++|++++|||||++++++.+ ++.+|+||||
T Consensus 157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~-~~~~~iv~E~ 235 (573)
T 3uto_A 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFED-DNEMVMIYEF 235 (573)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEC-SSEEEEEEEC
T ss_pred cccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEE-CCEEEEEEee
Confidence 5799999999999999999994 67999999999765433 5678999999999999999999997765 6789999999
Q ss_pred CCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCC--CcEEeccchhhhh
Q 004248 612 MPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDK--FEVRLGSLSEVCA 689 (766)
Q Consensus 612 ~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~--~~~kl~DFG~a~~ 689 (766)
|+||+|.++|.++. ..+++.+...|+.||+.||+|||++ +||||||||+|||++.+ +.+||+|||+|+.
T Consensus 236 ~~gg~L~~~i~~~~------~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~ 306 (573)
T 3uto_A 236 MSGGELFEKVADEH------NKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAH 306 (573)
T ss_dssp CCCCBHHHHHTCTT------SCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCSSCEE
T ss_pred cCCCcHHHHHHHhC------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeeccceeE
Confidence 99999999996543 2489999999999999999999998 99999999999999854 8999999999987
Q ss_pred cCCC--CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 690 QGGD--AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 690 ~~~~--~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
.... ....+||+.|+|||.+.+.. ++.++||||+||++|||++|+.||...
T Consensus 307 ~~~~~~~~~~~GT~~y~APEv~~~~~---------y~~~~DiWSlGvilyeml~G~~Pf~~~ 359 (573)
T 3uto_A 307 LDPKQSVKVTTGTAEFAAPEVAEGKP---------VGYYTDMWSVGVLSYILLSGLSPFGGE 359 (573)
T ss_dssp CCTTSEEEEECSSGGGCCHHHHTTCC---------BCHHHHHHHHHHHHHHHHHSCCSSCCS
T ss_pred ccCCCceeeeEECccccCHHHhCCCC---------CCcHHHHHHHHHHHHHHHHCCCCCCCc
Confidence 7433 34568999999999987654 467999999999999999999999543
No 24
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=8.5e-39 Score=383.66 Aligned_cols=288 Identities=35% Similarity=0.519 Sum_probs=192.2
Q ss_pred hhccCCCCCEEecCCCCCCCCCchhhhhC--------------------------CCCCCEEEccCCCCCccCCcccCCC
Q 004248 112 ALVNLTHLASFNASRFLLPGSIPDWLGQQ--------------------------LPTLQALDLRSCSISGVIPFSLGNL 165 (766)
Q Consensus 112 ~l~~l~~L~~L~ls~n~l~g~ip~~~~~~--------------------------l~~L~~L~Ls~N~l~g~~p~~l~~l 165 (766)
.+.++++|+.|++++|.+.|.+|..+..- +++|++|+|++|.+++.+|..++++
T Consensus 338 ~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l 417 (768)
T 3rgz_A 338 TLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNC 417 (768)
T ss_dssp HHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGC
T ss_pred HHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCccccccCHHHhcC
Confidence 47778888888888887777777766541 3345555555555555566666666
Q ss_pred CCCcEEEeecCcCCCCCCccccCCCCCCEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCCCCCCCccEEEc
Q 004248 166 TNLTSLYLSDNGLTGTIPSSLGQLSVLSVLDLSRNSLTGNIPTSFGLLKNLSSLDISSNYLTGSIPPGLGTLSKLQYLNV 245 (766)
Q Consensus 166 ~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 245 (766)
++|++|+|++|++++.+|..++++++|++|++++|++++.+|..+..+++|+.|+|++|++++.+|..++++++|++|+|
T Consensus 418 ~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L 497 (768)
T 3rgz_A 418 SELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISL 497 (768)
T ss_dssp TTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEEC
T ss_pred CCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEc
Confidence 66666666666666666666666667777777777776666666666777777777777777666766777777777777
Q ss_pred cCCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccCCCCCCCEEEccCccCccccCCCcc------------------
Q 004248 246 SNNSLASSIPAQLGDLDSLVDLDLSMNSLSGSVPSELRGLRSLQKFVIGNNFLSGNLSVNLF------------------ 307 (766)
Q Consensus 246 s~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~~~~~~~------------------ 307 (766)
++|++++.+|.+++++++|++|+|++|+++|.+|..++++++|+.|++++|.++|.+|..++
T Consensus 498 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~ 577 (768)
T 3rgz_A 498 SNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVY 577 (768)
T ss_dssp CSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEE
T ss_pred cCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhccccccccc
Confidence 77777767777777777777777777777777777777777777777777776666654332
Q ss_pred ---------------------------------------------------CCCCcccEEEccCCCCCCCCCcccCCCCC
Q 004248 308 ---------------------------------------------------PTVSQLQIIVLRQNGFTGPPPDVLWSMPQ 336 (766)
Q Consensus 308 ---------------------------------------------------~~l~~L~~L~L~~N~l~~~~p~~l~~l~~ 336 (766)
..+++|+.|+|++|+++|.+|..++++++
T Consensus 578 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~ 657 (768)
T 3rgz_A 578 IKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPY 657 (768)
T ss_dssp EECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTT
T ss_pred cccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhcccc
Confidence 22345666666666666666666666666
Q ss_pred CCEEEccCCCCCCCCCcccccCCCCCcEEEccCCcCccCCCcC---CCCCCEEeccCCcCccccChh
Q 004248 337 LRLLDISRNNFTGPLPNSRSNVNTSTVELNISQNMFYGGLTPV---LGRFRLVDLSGNYFEGRVPEY 400 (766)
Q Consensus 337 L~~L~Ls~N~l~g~~p~~~~~~~~~l~~L~ls~N~l~g~~~~~---l~~l~~ldLs~N~l~g~~p~~ 400 (766)
|+.|||++|+++|.+|... ..+++|+.||||+|+++|.+|.. +..|+.||||+|+++|.||..
T Consensus 658 L~~L~Ls~N~l~g~ip~~l-~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~ 723 (768)
T 3rgz_A 658 LFILNLGHNDISGSIPDEV-GDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEM 723 (768)
T ss_dssp CCEEECCSSCCCSCCCGGG-GGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSS
T ss_pred CCEEeCcCCccCCCCChHH-hCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCc
Confidence 6666666666666666433 44566666666666666666643 455666666666666666653
No 25
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=2e-38 Score=341.60 Aligned_cols=199 Identities=16% Similarity=0.197 Sum_probs=174.2
Q ss_pred hCCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC---HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEE
Q 004248 533 TGDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK---TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLV 608 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~---~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV 608 (766)
.++|...+.||+|+||.||+|+. .+|+.||||++...... .+++.+|++++++++||||+++++++.. ++..|+|
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~-~~~~~lv 92 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIET-EKTLYLI 92 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEC-SSEEEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE-CCEEEEE
Confidence 46799999999999999999995 68999999999765433 4578899999999999999999998765 5789999
Q ss_pred EeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhh
Q 004248 609 YKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVC 688 (766)
Q Consensus 609 ~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~ 688 (766)
||||++|+|.+++...+. +++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 93 ~e~~~~~~L~~~l~~~~~-------l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~ 162 (328)
T 3fe3_A 93 MEYASGGEVFDYLVAHGR-------MKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSN 162 (328)
T ss_dssp ECCCTTCBHHHHHHHHCC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTCCG
T ss_pred EECCCCCcHHHHHHHcCC-------CCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeeccCce
Confidence 999999999999976543 89999999999999999999998 99999999999999999999999999998
Q ss_pred hcC--CCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCCc
Q 004248 689 AQG--GDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSSR 750 (766)
Q Consensus 689 ~~~--~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~~ 750 (766)
... ......+||+.|+|||.+....+ .+.++||||+||++|||+||+.||....
T Consensus 163 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~--------~~~~~DiwslG~il~ell~g~~pf~~~~ 218 (328)
T 3fe3_A 163 EFTVGGKLDAFCGAPPYAAPELFQGKKY--------DGPEVDVWSLGVILYTLVSGSLPFDGQN 218 (328)
T ss_dssp GGSSSCGGGTTSSSGGGCCHHHHHTCCC--------CSHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred ecCCCCccccccCCcceeCcccccCCCc--------CCchhhhhhhHHHHHHHHhCCCCCCCCC
Confidence 653 23455679999999998765543 3579999999999999999999996543
No 26
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=6.9e-38 Score=338.52 Aligned_cols=196 Identities=16% Similarity=0.154 Sum_probs=172.0
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccc----cCHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQS----VKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLV 608 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~----~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV 608 (766)
++|+..+.||+|+||.||+|+. .+|+.||||+++... ...+.+.+|++++++++||||+++++++.. .+..|+|
T Consensus 5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~-~~~~~lv 83 (337)
T 1o6l_A 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQT-HDRLCFV 83 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEEC-SSEEEEE
T ss_pred HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEe-CCEEEEE
Confidence 5788899999999999999995 579999999997542 235678999999999999999999997765 5689999
Q ss_pred EeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhh
Q 004248 609 YKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVC 688 (766)
Q Consensus 609 ~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~ 688 (766)
|||+++|+|.+++.+.+ .+++.++..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 84 ~E~~~gg~L~~~l~~~~-------~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~ 153 (337)
T 1o6l_A 84 MEYANGGELFFHLSRER-------VFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK 153 (337)
T ss_dssp EECCTTCBHHHHHHHHS-------CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCB
T ss_pred EeCCCCCcHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeeccchh
Confidence 99999999999997654 389999999999999999999998 99999999999999999999999999998
Q ss_pred hc---CCCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 689 AQ---GGDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 689 ~~---~~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
.. .......+||+.|+|||.+.... ++.++|||||||++|||+||+.||...
T Consensus 154 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~---------~~~~~DiwslG~il~ell~g~~Pf~~~ 208 (337)
T 1o6l_A 154 EGISDGATMKTFCGTPEYLAPEVLEDND---------YGRAVDWWGLGVVMYEMMCGRLPFYNQ 208 (337)
T ss_dssp CSCCTTCCBCCCEECGGGCCGGGGSSSC---------BCTTHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred hcccCCCcccccccChhhCChhhhcCCC---------CCchhhcccchhHHHHHhcCCCCCCCC
Confidence 64 22345568999999999886544 478999999999999999999999643
No 27
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=1.1e-38 Score=355.99 Aligned_cols=211 Identities=17% Similarity=0.170 Sum_probs=176.1
Q ss_pred cHHHHHHHhCCCCccceeecCCcceEEEEEEc-CCcEEEEEEeecccc----CHHHHHHHHHHHhhcCCCCcccceeEEE
Q 004248 525 TYQQLLAATGDFSDANLIKNGHSGDLFRGILE-GGIPVVIKRIDLQSV----KTEAYLLELDFFSKVSHARLVPLLGHCM 599 (766)
Q Consensus 525 ~~~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~----~~~~~~~E~~~l~~l~H~niv~l~~~~~ 599 (766)
.+.++....++|+..++||+|+||+||+|+.. +++.||||+++.... ..+.+.+|++++.+++|||||+++++|.
T Consensus 65 ~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 144 (437)
T 4aw2_A 65 KVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQ 144 (437)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEe
Confidence 34555566788999999999999999999964 588999999975322 1335899999999999999999999776
Q ss_pred ecCCcEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcE
Q 004248 600 ERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEV 679 (766)
Q Consensus 600 ~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~ 679 (766)
+ ++..|+|||||++|+|.+++.+.. ..+++..+..++.|++.||+|||+. +||||||||+|||++.++.+
T Consensus 145 ~-~~~~~lV~Ey~~gg~L~~~l~~~~------~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~v 214 (437)
T 4aw2_A 145 D-DNNLYLVMDYYVGGDLLTLLSKFE------DRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHI 214 (437)
T ss_dssp C-SSEEEEEECCCTTCBHHHHHHTTT------TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCE
T ss_pred e-CCEEEEEEecCCCCcHHHHHHHcc------CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCCE
Confidence 5 578999999999999999997632 2489999999999999999999998 99999999999999999999
Q ss_pred EeccchhhhhcCCC----CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 680 RLGSLSEVCAQGGD----AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 680 kl~DFG~a~~~~~~----~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
||+|||+|+..... ....+||+.|+|||.+.....+... ++.++|||||||++|||+||+.||...
T Consensus 215 kL~DFGla~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~----~~~~~DvwSlGvil~elltG~~Pf~~~ 284 (437)
T 4aw2_A 215 RLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGR----YGPECDWWSLGVCMYEMLYGETPFYAE 284 (437)
T ss_dssp EECCCTTCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCE----ECTHHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred EEcchhhhhhcccCCCcccccccCCcCeeChHHHhhcccCCCC----CCCcCeeHHHHHHHHHHHhCCCCCCCC
Confidence 99999999765332 2235789999999987521111111 578999999999999999999999644
No 28
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=5.4e-38 Score=336.76 Aligned_cols=196 Identities=17% Similarity=0.164 Sum_probs=174.0
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccc----cCHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQS----VKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLV 608 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~----~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV 608 (766)
++|+..+.||+|+||.||+|+. .+|+.||||+++... ...+.+.+|+.+++.++|||||++++++.+ .+..|+|
T Consensus 6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~-~~~~~lv 84 (318)
T 1fot_A 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQD-AQQIFMI 84 (318)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEEC-SSEEEEE
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEe-CCEEEEE
Confidence 5688899999999999999995 579999999997543 235678899999999999999999997765 5689999
Q ss_pred EeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhh
Q 004248 609 YKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVC 688 (766)
Q Consensus 609 ~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~ 688 (766)
|||+++|+|.+++.+.. .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 85 ~e~~~gg~L~~~l~~~~-------~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Dfg~a~ 154 (318)
T 1fot_A 85 MDYIEGGELFSLLRKSQ-------RFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAK 154 (318)
T ss_dssp ECCCCSCBHHHHHHHTS-------SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCE
T ss_pred EeCCCCCCHHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeecCcce
Confidence 99999999999997654 389999999999999999999998 99999999999999999999999999998
Q ss_pred hcCCCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 689 AQGGDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 689 ~~~~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
.........+||+.|+|||.+.... ++.++||||+||++|||++|+.||...
T Consensus 155 ~~~~~~~~~~gt~~y~aPE~~~~~~---------~~~~~DiwslG~il~ell~g~~pf~~~ 206 (318)
T 1fot_A 155 YVPDVTYTLCGTPDYIAPEVVSTKP---------YNKSIDWWSFGILIYEMLAGYTPFYDS 206 (318)
T ss_dssp ECSSCBCCCCSCTTTCCHHHHTTCC---------BCTTHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred ecCCccccccCCccccCHhHhcCCC---------CCcccchhhhHHHHHHHHhCCCCCCCC
Confidence 8766666678999999999876543 478999999999999999999999643
No 29
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=5.5e-38 Score=340.43 Aligned_cols=198 Identities=16% Similarity=0.194 Sum_probs=166.7
Q ss_pred hCCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC--HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEE
Q 004248 533 TGDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK--TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVY 609 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~--~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~ 609 (766)
.++|+..+.||+|+||+||+|+. .+|+.||||++...... .+++.+|++++++++|||||++++++.. .+..++||
T Consensus 9 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~-~~~~~lv~ 87 (347)
T 3zgw_A 9 LKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLET-ANKIFMVL 87 (347)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEEC-SSEEEEEE
T ss_pred hcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEe-CCEEEEEE
Confidence 46788999999999999999994 67999999999765432 4578999999999999999999997765 56899999
Q ss_pred eeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhh
Q 004248 610 KYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCA 689 (766)
Q Consensus 610 Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~ 689 (766)
|||++|+|.+++...+ .+++.++..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++.
T Consensus 88 E~~~gg~L~~~l~~~~-------~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~kL~DFG~a~~ 157 (347)
T 3zgw_A 88 EYCPGGELFDYIISQD-------RLSEEETRVVFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAK 157 (347)
T ss_dssp ECCTTCBHHHHHHHHS-------SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred eCCCCCCHHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCccHHHEEEcCCCCEEEEeccCccc
Confidence 9999999999997654 389999999999999999999998 999999999999999999999999999876
Q ss_pred cCC----CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 690 QGG----DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 690 ~~~----~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
... .....+||+.|+|||.+.+..+ ++.++||||+||++|||+||+.||...
T Consensus 158 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~--------~~~~~DiwSlG~il~ell~g~~Pf~~~ 213 (347)
T 3zgw_A 158 PKGNKDYHLQTCCGSLAYAAPELIQGKSY--------LGSEADVWSMGILLYVLMCGFLPFDDD 213 (347)
T ss_dssp --------------CGGGCCHHHHTTC-----------CCHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ccCCCCccccccCCccCccCHHHHcCCCC--------CCcHhHHHHHHHHHHHHHHCCCCCCCC
Confidence 532 2345578999999998865543 468999999999999999999999643
No 30
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=1.4e-37 Score=330.54 Aligned_cols=196 Identities=18% Similarity=0.267 Sum_probs=172.3
Q ss_pred hCCCCccceeecCCcceEEEEE-EcCCcEEEEEEeeccccC-HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEe
Q 004248 533 TGDFSDANLIKNGHSGDLFRGI-LEGGIPVVIKRIDLQSVK-TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYK 610 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~-~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~E 610 (766)
.++|+..+.||+|+||.||+|. ..+|+.||||++...... .+.+.+|+.++++++|||||++++++.. ++..|+|||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~~lv~e 97 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV-GDELWVVME 97 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEE-TTEEEEEEE
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEE-CCEEEEEEE
Confidence 3579999999999999999999 467999999999765443 6779999999999999999999998776 568999999
Q ss_pred eCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhc
Q 004248 611 YMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQ 690 (766)
Q Consensus 611 y~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~ 690 (766)
|+++|+|.+++.+. .+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 98 ~~~~~~L~~~~~~~--------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~ 166 (297)
T 3fxz_A 98 YLAGGSLTDVVTET--------CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQI 166 (297)
T ss_dssp CCTTCBHHHHHHHS--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred CCCCCCHHHHHhhc--------CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCceec
Confidence 99999999999753 389999999999999999999998 9999999999999999999999999998765
Q ss_pred CC---CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 691 GG---DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 691 ~~---~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
.. ......+|+.|+|||...... ++.++|||||||++|||+||+.||...
T Consensus 167 ~~~~~~~~~~~gt~~y~aPE~~~~~~---------~~~~~DiwslG~il~ell~g~~pf~~~ 219 (297)
T 3fxz_A 167 TPEQSKRSTMVGTPYWMAPEVVTRKA---------YGPKVDIWSLGIMAIEMIEGEPPYLNE 219 (297)
T ss_dssp CSTTCCBCCCCSCGGGCCHHHHHCSC---------BCTHHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred CCcccccCCccCCcCccChhhhcCCC---------CCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 32 233457899999999876544 478999999999999999999999544
No 31
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=5.6e-38 Score=337.75 Aligned_cols=213 Identities=31% Similarity=0.518 Sum_probs=183.7
Q ss_pred ccccHHHHHHHhCCCCccceeecCCcceEEEEEEcCCcEEEEEEeeccccC--HHHHHHHHHHHhhcCCCCcccceeEEE
Q 004248 522 ESFTYQQLLAATGDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVK--TEAYLLELDFFSKVSHARLVPLLGHCM 599 (766)
Q Consensus 522 ~~~~~~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~--~~~~~~E~~~l~~l~H~niv~l~~~~~ 599 (766)
..++++++....++|+..+.||+|+||.||+|...+|+.||||++...... ..++.+|++++++++||||+++++++.
T Consensus 18 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~ 97 (326)
T 3uim_A 18 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM 97 (326)
T ss_dssp EECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEEC
T ss_pred ceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEe
Confidence 468889999999999999999999999999999888999999999754332 347999999999999999999999886
Q ss_pred ecCCcEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcE
Q 004248 600 ERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEV 679 (766)
Q Consensus 600 ~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~ 679 (766)
. ++..++||||+++|+|.+++..... ....++|..+..++.|++.||+|||+.+.++|+||||||+|||++.++.+
T Consensus 98 ~-~~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~ 173 (326)
T 3uim_A 98 T-PTERLLVYPYMANGSVASCLRERPE---SQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEA 173 (326)
T ss_dssp C-SSCCEEEEECCTTCBHHHHHHCCST---TCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCE
T ss_pred c-CCceEEEEEeccCCCHHHHHHhccc---cCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCE
Confidence 5 5678999999999999999986543 22459999999999999999999999877799999999999999999999
Q ss_pred EeccchhhhhcCCC----CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCC
Q 004248 680 RLGSLSEVCAQGGD----AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNL 747 (766)
Q Consensus 680 kl~DFG~a~~~~~~----~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~ 747 (766)
||+|||+++..... .....+|..|+|||...... ++.++|||||||++|||+||+.||.
T Consensus 174 kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---------~~~~~Di~slG~il~~l~~g~~pf~ 236 (326)
T 3uim_A 174 VVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGK---------SSEKTDVFGYGVMLLELITGQRAFD 236 (326)
T ss_dssp EECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSE---------ECHHHHHHHHHHHHHHHHHCCCSBC
T ss_pred EeccCccccccCcccccccccccCCcCccCHHHhccCC---------CCccccchhHHHHHHHHHhCCCccc
Confidence 99999999865322 22345899999999875433 4789999999999999999999994
No 32
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=2.1e-37 Score=332.80 Aligned_cols=207 Identities=19% Similarity=0.230 Sum_probs=179.2
Q ss_pred ccccHHHHHHHhCC----------CCccceeecCCcceEEEEEEc-CCcEEEEEEeeccccC-HHHHHHHHHHHhhcCCC
Q 004248 522 ESFTYQQLLAATGD----------FSDANLIKNGHSGDLFRGILE-GGIPVVIKRIDLQSVK-TEAYLLELDFFSKVSHA 589 (766)
Q Consensus 522 ~~~~~~~l~~~~~~----------~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~-~~~~~~E~~~l~~l~H~ 589 (766)
..++++++.++++. |+..+.||+|+||.||+|+.. +|+.||||++...... .+.+.+|++++++++||
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 102 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF 102 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCT
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCC
Confidence 45888999888865 666789999999999999965 7999999999765443 67799999999999999
Q ss_pred CcccceeEEEecCCcEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCC
Q 004248 590 RLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQAS 669 (766)
Q Consensus 590 niv~l~~~~~~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~ 669 (766)
|||++++++.. .+..++||||+++|+|.+++.+. .++|.++..++.|++.||+|||+. +|+||||||+
T Consensus 103 niv~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~--------~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~ 170 (321)
T 2c30_A 103 NVVEMYKSYLV-GEELWVLMEFLQGGALTDIVSQV--------RLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSD 170 (321)
T ss_dssp TBCCEEEEEEE-TTEEEEEECCCCSCBHHHHHTTC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGG
T ss_pred CcceEEEEEEE-CCEEEEEEecCCCCCHHHHHHhc--------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHH
Confidence 99999998876 56899999999999999998642 389999999999999999999998 9999999999
Q ss_pred CeeeCCCCcEEeccchhhhhcCCC---CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCC
Q 004248 670 SILLDDKFEVRLGSLSEVCAQGGD---AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLN 746 (766)
Q Consensus 670 NILl~~~~~~kl~DFG~a~~~~~~---~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~ 746 (766)
||+++.++.+||+|||+++..... .....||+.|+|||...... ++.++|||||||++|||+||+.||
T Consensus 171 NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---------~~~~~Dv~slG~il~el~~g~~pf 241 (321)
T 2c30_A 171 SILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSL---------YATEVDIWSLGIMVIEMVDGEPPY 241 (321)
T ss_dssp GEEECTTCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCC---------BCTHHHHHHHHHHHHHHHHSSCTT
T ss_pred HEEECCCCcEEEeeeeeeeecccCccccccccCCccccCHhhhcCCC---------CCchhhHHHHHHHHHHHHhCCCCC
Confidence 999999999999999999765332 33457899999999876543 478999999999999999999999
Q ss_pred CCC
Q 004248 747 LSS 749 (766)
Q Consensus 747 ~~~ 749 (766)
...
T Consensus 242 ~~~ 244 (321)
T 2c30_A 242 FSD 244 (321)
T ss_dssp TTS
T ss_pred CCC
Confidence 643
No 33
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=3.2e-38 Score=349.59 Aligned_cols=206 Identities=16% Similarity=0.190 Sum_probs=175.1
Q ss_pred HHHHHHHhCCCCccceeecCCcceEEEEEE-cCCcEEEEEEeecccc----CHHHHHHHHHHHhhcCCCCcccceeEEEe
Q 004248 526 YQQLLAATGDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV----KTEAYLLELDFFSKVSHARLVPLLGHCME 600 (766)
Q Consensus 526 ~~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~----~~~~~~~E~~~l~~l~H~niv~l~~~~~~ 600 (766)
+.++....++|+..++||+|+||.||+|+. .+++.||||++..... ..+.+.+|+++++.++|||||++++++.+
T Consensus 61 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~ 140 (410)
T 3v8s_A 61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 140 (410)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred HHhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEE
Confidence 344555677899999999999999999995 5689999999975321 23468899999999999999999997765
Q ss_pred cCCcEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEE
Q 004248 601 RENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVR 680 (766)
Q Consensus 601 ~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~k 680 (766)
++..|+|||||++|+|.+++.+. .+++..+..++.||+.||+|||+. +||||||||+|||++.++.+|
T Consensus 141 -~~~~~lV~E~~~gg~L~~~l~~~--------~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ik 208 (410)
T 3v8s_A 141 -DRYLYMVMEYMPGGDLVNLMSNY--------DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLK 208 (410)
T ss_dssp -SSEEEEEECCCTTEEHHHHHHHC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEE
T ss_pred -CCEEEEEEeCCCCCcHHHHHHcC--------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCEE
Confidence 67899999999999999999653 289999999999999999999998 999999999999999999999
Q ss_pred eccchhhhhcCCC----CccceeeecccCCCCCCCCce-eeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 681 LGSLSEVCAQGGD----AHQSRITRLLRLPQSSEQGSS-GMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 681 l~DFG~a~~~~~~----~~~~~~t~~y~aPe~~~~~~~-g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
|+|||+|+..... ....+||+.|+|||.+..... ++ ++.++|||||||++|||+||+.||...
T Consensus 209 L~DFG~a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~------~~~~~DiwSlGvilyell~G~~Pf~~~ 276 (410)
T 3v8s_A 209 LADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGY------YGRECDWWSVGVFLYEMLVGDTPFYAD 276 (410)
T ss_dssp ECCCTTCEECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCE------EETHHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred EeccceeEeeccCCcccccCCcCCccccCHHHhhccCCCcC------CCCcceEecchHHHHHHHhCCCCCCCC
Confidence 9999999876432 235679999999998764331 11 478999999999999999999999643
No 34
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=1.4e-37 Score=341.46 Aligned_cols=198 Identities=17% Similarity=0.178 Sum_probs=171.9
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccc----cCHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQS----VKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLV 608 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~----~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV 608 (766)
++|+..+.||+|+||.||+|.. .+++.||||.+.... ...+.+.+|++++++++|||||++++++.+ ++..|+|
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~-~~~~~lv 93 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQD-EEDMFMV 93 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-SSEEEEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEe-CCEEEEE
Confidence 4688899999999999999995 568999999997543 225679999999999999999999997765 5689999
Q ss_pred EeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhh
Q 004248 609 YKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVC 688 (766)
Q Consensus 609 ~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~ 688 (766)
|||+++|+|.+++.+.. .+++.++..++.|++.||+|||+. +||||||||+|||++.++.+||+|||+++
T Consensus 94 ~e~~~gg~L~~~l~~~~-------~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~ 163 (384)
T 4fr4_A 94 VDLLLGGDLRYHLQQNV-------HFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAA 163 (384)
T ss_dssp ECCCTTEEHHHHHHTTC-------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred EecCCCCcHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEeccceee
Confidence 99999999999997643 389999999999999999999998 99999999999999999999999999998
Q ss_pred hcC--CCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 689 AQG--GDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 689 ~~~--~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
... ......+||+.|+|||.+....... ++.++|||||||++|||+||+.||..
T Consensus 164 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~------~~~~~DiwSlG~il~elltG~~Pf~~ 219 (384)
T 4fr4_A 164 MLPRETQITTMAGTKPYMAPEMFSSRKGAG------YSFAVDWWSLGVTAYELLRGRRPYHI 219 (384)
T ss_dssp ECCTTCCBCCCCSCGGGCCGGGTCCCSSCC------BCTTHHHHHHHHHHHHHHHSSCSSCC
T ss_pred eccCCCceeccCCCccccCCeeeccCCCCC------CCccceeechHHHHHHHHhCCCCCCC
Confidence 763 2345668999999999876432111 57899999999999999999999953
No 35
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=1.1e-37 Score=338.78 Aligned_cols=196 Identities=17% Similarity=0.161 Sum_probs=174.4
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccc----cCHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQS----VKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLV 608 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~----~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV 608 (766)
++|+..+.||+|+||.||+|+. .+|+.||||++.... ...+.+.+|++++++++|||||++++++.+ ++..|+|
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~~lv 119 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKD-NSNLYMV 119 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEEC-SSEEEEE
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc-CCEEEEE
Confidence 4688899999999999999995 579999999997543 235678999999999999999999997765 5689999
Q ss_pred EeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhh
Q 004248 609 YKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVC 688 (766)
Q Consensus 609 ~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~ 688 (766)
|||+++|+|.+++.+.+. +++.++..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 120 ~e~~~gg~L~~~l~~~~~-------~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFg~a~ 189 (350)
T 1rdq_E 120 MEYVAGGEMFSHLRRIGR-------FSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK 189 (350)
T ss_dssp EECCTTCBHHHHHHHHCC-------CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred EcCCCCCcHHHHHHHcCC-------CCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEcccccce
Confidence 999999999999986543 89999999999999999999998 99999999999999999999999999999
Q ss_pred hcCCCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 689 AQGGDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 689 ~~~~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
.........+||+.|+|||.+.... ++.++|||||||++|||+||+.||...
T Consensus 190 ~~~~~~~~~~gt~~y~aPE~~~~~~---------~~~~~DiwslG~il~ell~g~~Pf~~~ 241 (350)
T 1rdq_E 190 RVKGRTWTLCGTPEALAPEIILSKG---------YNKAVDWWALGVLIYEMAAGYPPFFAD 241 (350)
T ss_dssp ECSSCBCCCEECGGGCCHHHHTTCC---------BCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred eccCCcccccCCccccCHHHhcCCC---------CCCcCCEecccHhHhHHhhCCCCCCCC
Confidence 8766666778999999999876543 478999999999999999999999643
No 36
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=6.1e-38 Score=341.16 Aligned_cols=197 Identities=16% Similarity=0.169 Sum_probs=167.5
Q ss_pred hCCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccc----cCHHHHHHHHHHHhhc-CCCCcccceeEEEecCCcEE
Q 004248 533 TGDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQS----VKTEAYLLELDFFSKV-SHARLVPLLGHCMERENEKF 606 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~----~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~~ 606 (766)
.++|+..++||+|+||.||+|+. .+|+.||||+++... ...+.+.+|.++++.+ +|||||++++++.. ++..|
T Consensus 22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~-~~~~~ 100 (353)
T 3txo_A 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQT-PDRLF 100 (353)
T ss_dssp -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-SSEEE
T ss_pred hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEe-CCEEE
Confidence 46899999999999999999995 568999999997542 2356788999999998 69999999997765 56899
Q ss_pred EEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchh
Q 004248 607 LVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSE 686 (766)
Q Consensus 607 lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~ 686 (766)
+|||||++|+|.+++.+.+. +++.++..++.||+.||+|||+. +||||||||+|||++.++.+||+|||+
T Consensus 101 lv~E~~~gg~L~~~l~~~~~-------~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~DFG~ 170 (353)
T 3txo_A 101 FVMEFVNGGDLMFHIQKSRR-------FDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGM 170 (353)
T ss_dssp EEEECCCSCBHHHHHHHHSS-------CCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTT
T ss_pred EEEeCCCCCcHHHHHHHcCC-------CCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEccccc
Confidence 99999999999999976543 89999999999999999999998 999999999999999999999999999
Q ss_pred hhhcC---CCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 687 VCAQG---GDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 687 a~~~~---~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
|+... ......+||+.|+|||.+.... ++.++||||+||++|||+||+.||...
T Consensus 171 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---------~~~~~DiwslG~il~ell~G~~Pf~~~ 227 (353)
T 3txo_A 171 CKEGICNGVTTATFCGTPDYIAPEILQEML---------YGPAVDWWAMGVLLYEMLCGHAPFEAE 227 (353)
T ss_dssp CBCSCC---------CCGGGCCHHHHHHHH---------CTTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred eeecccCCccccccCCCcCeEChhhcCCCC---------cCCccCCCcchHHHHHHHhCCCCCCCC
Confidence 98642 2344567999999999875433 478999999999999999999999644
No 37
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=4.8e-38 Score=348.38 Aligned_cols=211 Identities=16% Similarity=0.153 Sum_probs=176.4
Q ss_pred cHHHHHHHhCCCCccceeecCCcceEEEEEE-cCCcEEEEEEeecccc----CHHHHHHHHHHHhhcCCCCcccceeEEE
Q 004248 525 TYQQLLAATGDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV----KTEAYLLELDFFSKVSHARLVPLLGHCM 599 (766)
Q Consensus 525 ~~~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~----~~~~~~~E~~~l~~l~H~niv~l~~~~~ 599 (766)
.++++....++|+..++||+|+||+||+|+. .+|+.||||+++.... ..+.+.+|.+++.+++|||||++++++.
T Consensus 52 ~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 131 (412)
T 2vd5_A 52 RLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQ 131 (412)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEe
Confidence 4455555678899999999999999999996 5799999999975332 2345889999999999999999999776
Q ss_pred ecCCcEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcE
Q 004248 600 ERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEV 679 (766)
Q Consensus 600 ~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~ 679 (766)
+ ++..|+|||||++|+|.+++.+.+ ..+++..+..++.||+.||+|||+. +||||||||+|||++.++++
T Consensus 132 ~-~~~~~lVmE~~~gg~L~~~l~~~~------~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g~v 201 (412)
T 2vd5_A 132 D-ENYLYLVMEYYVGGDLLTLLSKFG------ERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCGHI 201 (412)
T ss_dssp C-SSEEEEEECCCCSCBHHHHHHHHS------SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCE
T ss_pred e-CCEEEEEEcCCCCCcHHHHHHhcC------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCCCE
Confidence 5 578999999999999999997643 2489999999999999999999998 99999999999999999999
Q ss_pred EeccchhhhhcCCC----CccceeeecccCCCCCCCCc--eeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 680 RLGSLSEVCAQGGD----AHQSRITRLLRLPQSSEQGS--SGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 680 kl~DFG~a~~~~~~----~~~~~~t~~y~aPe~~~~~~--~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
||+|||+++..... ....+||+.|+|||.+.... .+... ++.++|||||||++|||+||+.||...
T Consensus 202 kL~DFGla~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~----~~~~~DiwSlGvilyelltG~~Pf~~~ 273 (412)
T 2vd5_A 202 RLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGS----YGPECDWWALGVFAYEMFYGQTPFYAD 273 (412)
T ss_dssp EECCCTTCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSE----ECTHHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred EEeechhheeccCCCccccceeccccCcCCHHHHhhcccCcCCCC----CChHHhhhHHhHHHHHHHhCCCCCCCC
Confidence 99999999876432 22357899999999875210 00011 588999999999999999999999654
No 38
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=9e-38 Score=335.56 Aligned_cols=209 Identities=33% Similarity=0.504 Sum_probs=178.5
Q ss_pred cHHHHHHHhCCCCccceeecCCcceEEEEEEcCCcEEEEEEeeccccC-HHHHHHHHHHHhhcCCCCcccceeEEEecCC
Q 004248 525 TYQQLLAATGDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVK-TEAYLLELDFFSKVSHARLVPLLGHCMEREN 603 (766)
Q Consensus 525 ~~~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~-~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~ 603 (766)
.+.++..++++|+..+.||+|+||.||+|+..+|+.||||++...... .+++.+|++++++++||||+++++++.. ++
T Consensus 30 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~ 108 (321)
T 2qkw_B 30 PLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDE-RN 108 (321)
T ss_dssp CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCC-TT
T ss_pred cHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CC
Confidence 334455678899999999999999999999888999999998765433 5789999999999999999999998765 56
Q ss_pred cEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEecc
Q 004248 604 EKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGS 683 (766)
Q Consensus 604 ~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~D 683 (766)
..++||||+++|+|.+++..... ....++|.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 109 ~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~D 182 (321)
T 2qkw_B 109 EMILIYKYMENGNLKRHLYGSDL---PTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITD 182 (321)
T ss_dssp CCEEEEECCTTCBTGGGSSSSCC---CSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCEEECC
T ss_pred eEEEEEEcCCCCcHHHHHhccCC---CccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCEEEee
Confidence 89999999999999999975432 123589999999999999999999998 999999999999999999999999
Q ss_pred chhhhhcCC-----CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 684 LSEVCAQGG-----DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 684 FG~a~~~~~-----~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
||+++.... ......+|..|+|||...... ++.++|||||||++|||+||+.||...
T Consensus 183 fg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---------~~~~~Di~slG~il~ell~g~~p~~~~ 244 (321)
T 2qkw_B 183 FGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGR---------LTEKSDVYSFGVVLFEVLCARSAIVQS 244 (321)
T ss_dssp CTTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCB---------CCTHHHHHHHHHHHHHHHHCCTTCSCS
T ss_pred cccccccccccccccccccCCCccccCHHHhcCCC---------CCcccchHhHHHHHHHHHhCCCccccc
Confidence 999976422 123346899999999875433 578999999999999999999999644
No 39
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=1.6e-36 Score=341.86 Aligned_cols=313 Identities=19% Similarity=0.193 Sum_probs=239.4
Q ss_pred Cccc--eeecC----------CCEEEEEcCCCCcCCCCCCCCccchhhhccCCCCCEEecCCCCCCCCCchhhhhCCCCC
Q 004248 77 VWNG--VRCQN----------GSVVGINISGFRRTRLGSQNPRFAADALVNLTHLASFNASRFLLPGSIPDWLGQQLPTL 144 (766)
Q Consensus 77 ~W~g--v~C~~----------~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~L~ls~n~l~g~ip~~~~~~l~~L 144 (766)
.|.+ |.|+. .+++.+++++.... ...+..+.++++|++|++++|.+.+.+|+.....+++|
T Consensus 9 ~~~~~~~~c~~~~l~~lp~l~~~l~~L~Ls~n~i~-------~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L 81 (455)
T 3v47_A 9 SVIGYNAICINRGLHQVPELPAHVNYVDLSLNSIA-------ELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSL 81 (455)
T ss_dssp EEETTEEECCSSCCSSCCCCCTTCCEEECCSSCCC-------EECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTC
T ss_pred EEEccccCcCCCCcccCCCCCCccCEEEecCCccC-------cCChhHhccCccccEEECcCCcccceECcccccccccC
Confidence 5655 88863 24778888875432 12234688999999999999999888876544569999
Q ss_pred CEEEccCCCCCccCCcccCCCCCCcEEEeecCcCCCCCCcc--ccCCCCCCEEEccCCCCCCCCCcc-cCCCCCCCEEec
Q 004248 145 QALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPSS--LGQLSVLSVLDLSRNSLTGNIPTS-FGLLKNLSSLDI 221 (766)
Q Consensus 145 ~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~--l~~L~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~L 221 (766)
++|+|++|.+++..|..|+++++|++|+|++|++++.+|.. +.++++|++|+|++|++++..|.. |.++++|++|+|
T Consensus 82 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L 161 (455)
T 3v47_A 82 IILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDL 161 (455)
T ss_dssp CEEECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEEC
T ss_pred CEEeCCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeC
Confidence 99999999999999999999999999999999999866655 999999999999999999888876 899999999999
Q ss_pred cCCcCCCCCCCCCCCC----------------------------------CCccEEEccCCCCCCCCccccCC-------
Q 004248 222 SSNYLTGSIPPGLGTL----------------------------------SKLQYLNVSNNSLASSIPAQLGD------- 260 (766)
Q Consensus 222 s~N~l~~~~p~~l~~l----------------------------------~~L~~L~Ls~N~l~~~~p~~l~~------- 260 (766)
++|.+++..|..+..+ ++|++|++++|++++.+|..+..
T Consensus 162 ~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L 241 (455)
T 3v47_A 162 TFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKI 241 (455)
T ss_dssp TTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCE
T ss_pred CCCcccccChhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccce
Confidence 9999998888776554 56777777777666544432211
Q ss_pred --------------------------------CCCCCEEEccCCcCCccCCcccCCCCCCCEEEccCccCccccCCCccC
Q 004248 261 --------------------------------LDSLVDLDLSMNSLSGSVPSELRGLRSLQKFVIGNNFLSGNLSVNLFP 308 (766)
Q Consensus 261 --------------------------------l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~~~~~~~~ 308 (766)
.++|++|++++|++++.+|..++.+++|++|++++|.+++..+. .|.
T Consensus 242 ~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-~~~ 320 (455)
T 3v47_A 242 QSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDN-AFW 320 (455)
T ss_dssp EEEECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTT-TTT
T ss_pred eeEeeccccccccccchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChh-Hhc
Confidence 24677777777777777777777777888888888877754443 346
Q ss_pred CCCcccEEEccCCCCCCCCCcccCCCCCCCEEEccCCCCCCCCCcccccCCCCCcEEEccCCcCccCCC---cCCCCCCE
Q 004248 309 TVSQLQIIVLRQNGFTGPPPDVLWSMPQLRLLDISRNNFTGPLPNSRSNVNTSTVELNISQNMFYGGLT---PVLGRFRL 385 (766)
Q Consensus 309 ~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~L~ls~N~l~g~~~---~~l~~l~~ 385 (766)
.+++|+.|+|++|++++.+|..+..+++|++|+|++|++++..|.. +..+++|++|++++|.+.+..+ ..+++|+.
T Consensus 321 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~-~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 399 (455)
T 3v47_A 321 GLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQS-FLGLPNLKELALDTNQLKSVPDGIFDRLTSLQK 399 (455)
T ss_dssp TCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTT-TTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCE
T ss_pred CcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhh-ccccccccEEECCCCccccCCHhHhccCCcccE
Confidence 7777888888888777777777777788888888888777666643 3456777788888877776333 23567777
Q ss_pred EeccCCcCccccC
Q 004248 386 VDLSGNYFEGRVP 398 (766)
Q Consensus 386 ldLs~N~l~g~~p 398 (766)
|+|++|++++.+|
T Consensus 400 L~l~~N~l~~~~~ 412 (455)
T 3v47_A 400 IWLHTNPWDCSCP 412 (455)
T ss_dssp EECCSSCBCCCTT
T ss_pred EEccCCCcccCCC
Confidence 8888888877777
No 40
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=1.8e-37 Score=336.23 Aligned_cols=198 Identities=18% Similarity=0.211 Sum_probs=172.2
Q ss_pred HhCCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccc----cCHHHHHHHHHHHhhc-CCCCcccceeEEEecCCcE
Q 004248 532 ATGDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQS----VKTEAYLLELDFFSKV-SHARLVPLLGHCMERENEK 605 (766)
Q Consensus 532 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~----~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~ 605 (766)
..++|...++||+|+||.||+|+. .+|+.||||+++... ...+.+.+|.+++.++ +|||||++++++.+ ++..
T Consensus 15 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~-~~~~ 93 (345)
T 1xjd_A 15 KIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQT-KENL 93 (345)
T ss_dssp -CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEEC-SSEE
T ss_pred ChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEe-CCEE
Confidence 457899999999999999999995 568999999997643 2356788999999987 99999999997765 5689
Q ss_pred EEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccch
Q 004248 606 FLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLS 685 (766)
Q Consensus 606 ~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG 685 (766)
|+||||+++|+|.+++.+.+ .+++.++..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 94 ~lv~E~~~gg~L~~~l~~~~-------~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG 163 (345)
T 1xjd_A 94 FFVMEYLNGGDLMYHIQSCH-------KFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFG 163 (345)
T ss_dssp EEEEECCTTCBHHHHHHHHS-------SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCT
T ss_pred EEEEeCCCCCcHHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEEeECh
Confidence 99999999999999997653 389999999999999999999998 99999999999999999999999999
Q ss_pred hhhhc---CCCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 686 EVCAQ---GGDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 686 ~a~~~---~~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
+++.. .......+||+.|+|||.+.... ++.++||||+||++|||+||+.||...
T Consensus 164 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---------~~~~~DiwslG~il~ell~g~~Pf~~~ 221 (345)
T 1xjd_A 164 MCKENMLGDAKTNTFCGTPDYIAPEILLGQK---------YNHSVDWWSFGVLLYEMLIGQSPFHGQ 221 (345)
T ss_dssp TCBCCCCTTCCBCCCCSCGGGCCHHHHTTCC---------BCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred hhhhcccCCCcccCCCCCcccCChhhhcCCC---------CCChhhhHHHHHHHHHHhcCCCCCCCC
Confidence 99864 22345567899999999886544 478999999999999999999999643
No 41
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=1.2e-37 Score=343.26 Aligned_cols=196 Identities=18% Similarity=0.175 Sum_probs=170.9
Q ss_pred hCCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC----HHHHHHHHHHHhhc-CCCCcccceeEEEecCCcEE
Q 004248 533 TGDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK----TEAYLLELDFFSKV-SHARLVPLLGHCMERENEKF 606 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~----~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~~ 606 (766)
.++|+..++||+|+||+||+|+. .+++.||||+++..... .+.+.+|..++.++ +|||||++++++.+ ++..|
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~-~~~~~ 129 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQT-ESRLF 129 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEEC-SSEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEE-CCEEE
Confidence 35688999999999999999995 56889999999765432 34688999999887 89999999997765 67899
Q ss_pred EEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchh
Q 004248 607 LVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSE 686 (766)
Q Consensus 607 lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~ 686 (766)
+|||||++|+|.+++.+.+ .+++..+..++.||+.||+|||+. +||||||||+|||++.++.+||+|||+
T Consensus 130 lV~E~~~gg~L~~~l~~~~-------~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFGl 199 (396)
T 4dc2_A 130 FVIEYVNGGDLMFHMQRQR-------KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGM 199 (396)
T ss_dssp EEEECCTTCBHHHHHHHHS-------SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTT
T ss_pred EEEEcCCCCcHHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEeecce
Confidence 9999999999999997654 389999999999999999999998 999999999999999999999999999
Q ss_pred hhhc---CCCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 687 VCAQ---GGDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 687 a~~~---~~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
|+.. .......+||+.|+|||.+.... ++.++||||+||++|||++|+.||..
T Consensus 200 a~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~---------~~~~~DiwslGvllyell~G~~Pf~~ 255 (396)
T 4dc2_A 200 CKEGLRPGDTTSTFCGTPNYIAPEILRGED---------YGFSVDWWALGVLMFEMMAGRSPFDI 255 (396)
T ss_dssp CBCCCCTTCCBCCCCBCGGGCCHHHHTTCC---------BCTHHHHHHHHHHHHHHHHSSCSSTT
T ss_pred eeecccCCCccccccCCcccCCchhhcCCC---------CChHHHHHHHHHHHHHHHhCCCCCcc
Confidence 9863 23345668999999999886554 47899999999999999999999953
No 42
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=2.8e-37 Score=335.12 Aligned_cols=195 Identities=19% Similarity=0.179 Sum_probs=170.4
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC----HHHHHHHHHHHhhc-CCCCcccceeEEEecCCcEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK----TEAYLLELDFFSKV-SHARLVPLLGHCMERENEKFL 607 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~----~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~~l 607 (766)
++|+..+.||+|+||.||+|+. .+++.||||++...... .+.+.+|.+++.++ +|||||++++++.. ++..|+
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~-~~~~~l 87 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQT-ESRLFF 87 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-SSEEEE
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEe-CCEEEE
Confidence 4688899999999999999995 56899999999765432 45688999999998 89999999997765 578999
Q ss_pred EEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhh
Q 004248 608 VYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEV 687 (766)
Q Consensus 608 V~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a 687 (766)
||||+++|+|.+++.+.+ .+++..+..++.||+.||+|||+. +|+||||||+|||++.++++||+|||++
T Consensus 88 v~e~~~gg~L~~~l~~~~-------~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFG~a 157 (345)
T 3a8x_A 88 VIEYVNGGDLMFHMQRQR-------KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMC 157 (345)
T ss_dssp EECCCCSCBHHHHHHHHS-------SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCGGGC
T ss_pred EEeCCCCCcHHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEecccc
Confidence 999999999999997654 389999999999999999999998 9999999999999999999999999999
Q ss_pred hhc---CCCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 688 CAQ---GGDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 688 ~~~---~~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
+.. .......+||+.|+|||.+.... ++.++||||+||++|||+||+.||..
T Consensus 158 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---------~~~~~DiwslG~il~ell~g~~pf~~ 212 (345)
T 3a8x_A 158 KEGLRPGDTTSTFCGTPNYIAPEILRGED---------YGFSVDWWALGVLMFEMMAGRSPFDI 212 (345)
T ss_dssp BCSCCTTCCBCCCCSCGGGCCHHHHTTCC---------BCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred ccccCCCCcccccCCCccccCccccCCCC---------CChHHhHHHHHHHHHHHHhCCCCcCC
Confidence 863 23345567999999999876543 47899999999999999999999954
No 43
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=6.3e-37 Score=327.20 Aligned_cols=197 Identities=16% Similarity=0.253 Sum_probs=170.0
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeecccc-CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEee
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV-KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKY 611 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey 611 (766)
++|...++||+|+||.||+|.. .+++.||+|++..... ..+.|.+|++++++++||||+++++++.+ ++..++||||
T Consensus 10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~~lv~e~ 88 (310)
T 3s95_A 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYK-DKRLNFITEY 88 (310)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEE-TTEEEEEEEC
T ss_pred hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEec-CCeeEEEEEe
Confidence 4678889999999999999995 5689999999855333 36689999999999999999999998876 5689999999
Q ss_pred CCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcC
Q 004248 612 MPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQG 691 (766)
Q Consensus 612 ~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~ 691 (766)
+++|+|.+++..... .++|.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 89 ~~~~~L~~~l~~~~~------~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 159 (310)
T 3s95_A 89 IKGGTLRGIIKSMDS------QYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMV 159 (310)
T ss_dssp CTTCBHHHHHHHCCT------TSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTCEECC
T ss_pred cCCCcHHHHHHhccC------CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccceecc
Confidence 999999999976432 489999999999999999999998 99999999999999999999999999997653
Q ss_pred CCC-----------------ccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 692 GDA-----------------HQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 692 ~~~-----------------~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
... ....||+.|+|||...... ++.++|||||||++|||++|+.|+...
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---------~~~~~Di~slG~~l~el~~g~~~~~~~ 225 (310)
T 3s95_A 160 DEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRS---------YDEKVDVFSFGIVLCEIIGRVNADPDY 225 (310)
T ss_dssp --------------------CCCCSCGGGCCHHHHTTCC---------CCTHHHHHHHHHHHHHHHHTCCSSTTT
T ss_pred cccccccccccccccccccccccCCCcceeCHHHhcCCC---------CCcHHHHHHHHHHHHHHhcCCCCCcch
Confidence 221 1346899999999876543 478999999999999999999998543
No 44
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.9e-37 Score=330.66 Aligned_cols=198 Identities=11% Similarity=0.147 Sum_probs=172.6
Q ss_pred hCCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccCHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEee
Q 004248 533 TGDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKY 611 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey 611 (766)
.++|...+.||+|+||.||+|+. .+++.||+|.+.......+.+.+|++++++++|||||++++++.+ .+..++||||
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~-~~~~~lv~e~ 82 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFES-MEELVMIFEF 82 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEE-TTEEEEEECC
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCcccHHHHHHHHHHHHhCCCCCCCeEeEEEec-CCEEEEEEEe
Confidence 36788999999999999999995 568999999997655556679999999999999999999998765 5689999999
Q ss_pred CCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCC--CCcEEeccchhhhh
Q 004248 612 MPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDD--KFEVRLGSLSEVCA 689 (766)
Q Consensus 612 ~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~--~~~~kl~DFG~a~~ 689 (766)
|++|+|.+++.... ..+++.++..++.|++.||+|||+. +|+||||||+|||++. ++.+||+|||+++.
T Consensus 83 ~~g~~L~~~l~~~~------~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~ 153 (321)
T 1tki_A 83 ISGLDIFERINTSA------FELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQ 153 (321)
T ss_dssp CCCCBHHHHHTSSS------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEE
T ss_pred CCCCCHHHHHHhcC------CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECCCCeE
Confidence 99999999997543 2489999999999999999999998 9999999999999997 78999999999987
Q ss_pred cCCC--CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 690 QGGD--AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 690 ~~~~--~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
.... .....+|+.|+|||...... ++.++||||+||++|||+||+.||...
T Consensus 154 ~~~~~~~~~~~gt~~y~aPE~~~~~~---------~~~~~DiwslG~il~~ll~g~~pf~~~ 206 (321)
T 1tki_A 154 LKPGDNFRLLFTAPEYYAPEVHQHDV---------VSTATDMWSLGTLVYVLLSGINPFLAE 206 (321)
T ss_dssp CCTTCEEEEEESCGGGSCHHHHTTCE---------ECHHHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred CCCCCccccccCChhhcCcHHhcCCC---------CCchhhHHHHHHHHHHHHhCCCCCcCC
Confidence 6432 33456899999999876543 478999999999999999999999543
No 45
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=2.5e-37 Score=332.35 Aligned_cols=202 Identities=18% Similarity=0.230 Sum_probs=169.7
Q ss_pred CCCCccceeecCCcceEEEEEEcCCcEEEEEEeeccccCHHHHHHHHHHHhhcCCCCcccceeEEEecC---CcEEEEEe
Q 004248 534 GDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERE---NEKFLVYK 610 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~---~~~~lV~E 610 (766)
++|+..++||+|+||.||+|+.. ++.||||++.........+.+|+.++++++|||||++++++.... ...++|||
T Consensus 24 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~e 102 (322)
T 3soc_A 24 MPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITA 102 (322)
T ss_dssp EEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEE
T ss_pred hhchhhheecccCceEEEEEEEC-CCEEEEEEeecCchHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEEe
Confidence 56888999999999999999865 789999999766555566778999999999999999999887632 23799999
Q ss_pred eCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCC-------CCCeEecCCCCCCeeeCCCCcEEecc
Q 004248 611 YMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHEC-------TLPFVHRDVQASSILLDDKFEVRLGS 683 (766)
Q Consensus 611 y~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~-------~~~iiHrDlKp~NILl~~~~~~kl~D 683 (766)
|+++|+|.++++.. .++|.++..++.|+++||+|||+.+ .++|+||||||+|||++.++.+||+|
T Consensus 103 ~~~~g~L~~~l~~~--------~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~D 174 (322)
T 3soc_A 103 FHEKGSLSDFLKAN--------VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIAD 174 (322)
T ss_dssp CCTTCBHHHHHHHC--------CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECC
T ss_pred cCCCCCHHHHHHhc--------CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEcc
Confidence 99999999999753 3899999999999999999999851 33899999999999999999999999
Q ss_pred chhhhhcCCC-----CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 684 LSEVCAQGGD-----AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 684 FG~a~~~~~~-----~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
||+++..... .....+|..|+|||.+........ .++.++|||||||++|||+||+.||..
T Consensus 175 Fg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~----~~~~~~DiwslG~il~el~tg~~pf~~ 240 (322)
T 3soc_A 175 FGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQR----DAFLRIDMYAMGLVLWELASRCTAADG 240 (322)
T ss_dssp CTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCH----HHHHHHHHHHHHHHHHHHHTTBTTSSS
T ss_pred CCcccccccccCccccccCccCccccCHhhcccccccCc----CCCccchhHHHHHHHHHHHhCCCCCCC
Confidence 9999765321 233578999999998765322111 157899999999999999999999954
No 46
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=5.7e-37 Score=334.42 Aligned_cols=197 Identities=16% Similarity=0.152 Sum_probs=171.5
Q ss_pred hCCCCccceeecCCcceEEEEEE-cCCcEEEEEEeecccc-------CHHHHHHHHHHHhhcCCCCcccceeEEEecCCc
Q 004248 533 TGDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV-------KTEAYLLELDFFSKVSHARLVPLLGHCMERENE 604 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-------~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 604 (766)
.++|+..+.||+|+||.||+|+. .+|+.||||.+..... ..+.+.+|++++++++|||||++++++.+ ++.
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~ 89 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYEN-RTD 89 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEEC-SSE
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEe-CCE
Confidence 35688899999999999999995 5799999999976432 24689999999999999999999997765 568
Q ss_pred EEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCC----cEE
Q 004248 605 KFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKF----EVR 680 (766)
Q Consensus 605 ~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~----~~k 680 (766)
.|+||||+++|+|.+++.... .+++.++..++.||+.||+|||+. +|+||||||+|||++.++ .+|
T Consensus 90 ~~lv~e~~~gg~L~~~l~~~~-------~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~~vk 159 (361)
T 2yab_A 90 VVLILELVSGGELFDFLAQKE-------SLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIK 159 (361)
T ss_dssp EEEEEECCCSCBHHHHHTTCS-------CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEE
T ss_pred EEEEEEcCCCCcHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCccCEE
Confidence 999999999999999997543 389999999999999999999998 999999999999998877 799
Q ss_pred eccchhhhhcCC--CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 681 LGSLSEVCAQGG--DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 681 l~DFG~a~~~~~--~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
|+|||+++.... ......||+.|+|||.+.... ++.++||||+||++|||++|+.||...
T Consensus 160 l~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~---------~~~~~DiwslGvil~~ll~g~~Pf~~~ 221 (361)
T 2yab_A 160 LIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEP---------LGLEADMWSIGVITYILLSGASPFLGD 221 (361)
T ss_dssp ECCCSSCEECCTTCCCCCCCSCGGGCCHHHHTTCC---------CCTHHHHHHHHHHHHHHHHSCCSSCCS
T ss_pred EEecCCceEcCCCCccccCCCCccEECchHHcCCC---------CCccccHHHHHHHHHHHHhCCCCCCCC
Confidence 999999987633 234567999999999876544 468999999999999999999999543
No 47
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=1.4e-37 Score=340.49 Aligned_cols=201 Identities=10% Similarity=0.111 Sum_probs=168.9
Q ss_pred hCCCCccceeecCCcceEEEEE------EcCCcEEEEEEeeccccCHHHHHHHHHHHhhcC---CCCcccceeEEEecCC
Q 004248 533 TGDFSDANLIKNGHSGDLFRGI------LEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVS---HARLVPLLGHCMEREN 603 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~------~~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~---H~niv~l~~~~~~~~~ 603 (766)
.++|...++||+|+||.||+|. ..+++.||||+++.. ..+++.+|++++++++ |+||+++++++.. ++
T Consensus 64 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~-~~ 140 (365)
T 3e7e_A 64 SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA--NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLF-QN 140 (365)
T ss_dssp SSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC--CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEEC-SS
T ss_pred CEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC--ChhHHHHHHHHHHHhhhhhhhhhhhhheeeec-CC
Confidence 4678889999999999999994 556899999998643 3567888999998887 9999999998876 56
Q ss_pred cEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCC--------
Q 004248 604 EKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDD-------- 675 (766)
Q Consensus 604 ~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~-------- 675 (766)
..|+|||||++|+|.+++...... ....++|.+++.|+.||++||+|||+. +||||||||+|||++.
T Consensus 141 ~~~lv~e~~~~g~L~~~l~~~~~~--~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~~~~~~~ 215 (365)
T 3e7e_A 141 GSVLVGELYSYGTLLNAINLYKNT--PEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGFLEQDDE 215 (365)
T ss_dssp CEEEEECCCCSCBHHHHHHHHHTS--TTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGGTCC---
T ss_pred CcEEEEeccCCCcHHHHHHHhhcc--cccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecccccCcccc
Confidence 899999999999999999753220 123599999999999999999999997 9999999999999998
Q ss_pred ---CCcEEeccchhhhhcC-----CCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCC
Q 004248 676 ---KFEVRLGSLSEVCAQG-----GDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNL 747 (766)
Q Consensus 676 ---~~~~kl~DFG~a~~~~-----~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~ 747 (766)
++.+||+|||+|+... ......+||..|+|||.+.+.. ++.++|||||||++|||+||+.||.
T Consensus 216 ~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---------~~~~~DiwslG~il~elltg~~pf~ 286 (365)
T 3e7e_A 216 DDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKP---------WNYQIDYFGVAATVYCMLFGTYMKV 286 (365)
T ss_dssp ---CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCC---------BSTHHHHHHHHHHHHHHHHSSCCCE
T ss_pred ccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCC---------CCccccHHHHHHHHHHHHhCCCccc
Confidence 8999999999996542 1223456899999999886654 4789999999999999999999995
Q ss_pred CCc
Q 004248 748 SSR 750 (766)
Q Consensus 748 ~~~ 750 (766)
...
T Consensus 287 ~~~ 289 (365)
T 3e7e_A 287 KNE 289 (365)
T ss_dssp EEE
T ss_pred cCC
Confidence 443
No 48
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=4.1e-37 Score=332.16 Aligned_cols=197 Identities=15% Similarity=0.176 Sum_probs=171.4
Q ss_pred hCCCCccceeecCCcceEEEEEE-cCCcEEEEEEeecccc----CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEE
Q 004248 533 TGDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV----KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFL 607 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~----~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~l 607 (766)
.++|...+.||+|+||.||+|.. .+++.||||++..... ..+.+.+|+++++.++|||||++++++.. ++..++
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~-~~~~~l 86 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITT-PTDIVM 86 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEEC-SSEEEE
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEe-CCEEEE
Confidence 36789999999999999999995 6799999999975422 24579999999999999999999998765 568999
Q ss_pred EEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhh
Q 004248 608 VYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEV 687 (766)
Q Consensus 608 V~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a 687 (766)
||||+ +|+|.+++.+.+ .+++.++..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||++
T Consensus 87 v~E~~-~g~l~~~l~~~~-------~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG~s 155 (336)
T 3h4j_B 87 VIEYA-GGELFDYIVEKK-------RMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLS 155 (336)
T ss_dssp EECCC-CEEHHHHHHHHC-------SCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSSCT
T ss_pred EEECC-CCcHHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEeccc
Confidence 99999 689999987654 389999999999999999999998 9999999999999999999999999999
Q ss_pred hhcCC--CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 688 CAQGG--DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 688 ~~~~~--~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
+.... .....+||+.|+|||.+.+..+ .++++||||+||++|||+||+.||...
T Consensus 156 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~--------~~~~~DiwslG~il~~ll~g~~Pf~~~ 211 (336)
T 3h4j_B 156 NIMTDGNFLKTSCGSPNYAAPEVINGKLY--------AGPEVDVWSCGIVLYVMLVGRLPFDDE 211 (336)
T ss_dssp BTTTTSBTTCCCTTSTTTSCGGGSCCSGG--------GCHHHHHHHHHHHHHHHHHSSCSSBCS
T ss_pred eeccCCcccccccCCcCcCCHHHHcCCCC--------CCCccchhHHHHHHHHHHhCCCCCCCc
Confidence 86532 2345678999999999865543 368999999999999999999999644
No 49
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=4.1e-37 Score=334.48 Aligned_cols=198 Identities=14% Similarity=0.137 Sum_probs=171.6
Q ss_pred HhCCCCccceeecCCcceEEEEEEc-CCcEEEEEEeeccc----cCHHHHHHHHHHHhhc-CCCCcccceeEEEecCCcE
Q 004248 532 ATGDFSDANLIKNGHSGDLFRGILE-GGIPVVIKRIDLQS----VKTEAYLLELDFFSKV-SHARLVPLLGHCMERENEK 605 (766)
Q Consensus 532 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~----~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~ 605 (766)
..++|+..++||+|+||.||+|+.. +|+.||||+++... ...+.+.+|.+++..+ +||||+++++++.. .+..
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~-~~~~ 96 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQT-MDRL 96 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEEC-SSEE
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEc-CCEE
Confidence 3468999999999999999999964 58899999997643 2356788999999988 89999999996654 5789
Q ss_pred EEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccch
Q 004248 606 FLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLS 685 (766)
Q Consensus 606 ~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG 685 (766)
|+||||+++|+|.+++.+.+ .+++.++..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 97 ~lv~E~~~gg~L~~~l~~~~-------~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG 166 (353)
T 2i0e_A 97 YFVMEYVNGGDLMYHIQQVG-------RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFG 166 (353)
T ss_dssp EEEEECCCSCBHHHHHHHHS-------SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCT
T ss_pred EEEEeCCCCCcHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEEeCC
Confidence 99999999999999997654 389999999999999999999998 99999999999999999999999999
Q ss_pred hhhhc---CCCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 686 EVCAQ---GGDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 686 ~a~~~---~~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
+++.. .......+||+.|+|||.+.... ++.++|||||||++|||++|+.||...
T Consensus 167 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---------~~~~~DiwslG~il~ell~G~~Pf~~~ 224 (353)
T 2i0e_A 167 MCKENIWDGVTTKTFCGTPDYIAPEIIAYQP---------YGKSVDWWAFGVLLYEMLAGQAPFEGE 224 (353)
T ss_dssp TCBCCCCTTCCBCCCCSCGGGCCHHHHTTCC---------BSTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cccccccCCcccccccCCccccChhhhcCCC---------cCCcccccchHHHHHHHHcCCCCCCCC
Confidence 99864 22345567999999999876544 478999999999999999999999643
No 50
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=7e-37 Score=327.26 Aligned_cols=197 Identities=19% Similarity=0.249 Sum_probs=167.0
Q ss_pred hCCCCccceeecCCcceEEEEEEcCCcEEEEEEeeccccC---HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEE
Q 004248 533 TGDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVK---TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVY 609 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~---~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~ 609 (766)
.++|+..+.||+|+||.||+|+..+|+.||||++...... .+.+.+|++++++++|||||++++++.. ++..++||
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~~lv~ 98 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHS-ERCLTLVF 98 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECC-SSCEEEEE
T ss_pred HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEcc-CCEEEEEE
Confidence 3678899999999999999999888999999999654332 4678999999999999999999997765 56899999
Q ss_pred eeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhh
Q 004248 610 KYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCA 689 (766)
Q Consensus 610 Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~ 689 (766)
||++ |+|.+++.... ..+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 99 e~~~-~~l~~~~~~~~------~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~ 168 (311)
T 3niz_A 99 EFME-KDLKKVLDENK------TGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARA 168 (311)
T ss_dssp ECCS-EEHHHHHHTCT------TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred cCCC-CCHHHHHHhcc------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCcCcee
Confidence 9998 58888887543 2489999999999999999999998 999999999999999999999999999987
Q ss_pred cCC---CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 690 QGG---DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 690 ~~~---~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
.+. ......+|+.|+|||.+..... ++.++||||+||++|||+||+.||..
T Consensus 169 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~--------~~~~~DiwslG~il~~ll~g~~pf~~ 222 (311)
T 3niz_A 169 FGIPVRSYTHEVVTLWYRAPDVLMGSKK--------YSTSVDIWSIGCIFAEMITGKPLFPG 222 (311)
T ss_dssp TTSCCC---CCCCCCTTCCHHHHTTCCS--------CCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred cCCCcccccCCcccCCcCCHHHhcCCCC--------CCchHHhHHHHHHHHHHHhCCCCCCC
Confidence 542 2334568999999998754321 57899999999999999999999954
No 51
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=9.6e-37 Score=323.87 Aligned_cols=200 Identities=15% Similarity=0.227 Sum_probs=166.6
Q ss_pred hCCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC---------------------------HHHHHHHHHHHh
Q 004248 533 TGDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK---------------------------TEAYLLELDFFS 584 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~---------------------------~~~~~~E~~~l~ 584 (766)
.++|+..+.||+|+||.||+|+. .+++.||||++...... .+++.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 36788999999999999999985 57899999999654311 246899999999
Q ss_pred hcCCCCcccceeEEEec-CCcEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEe
Q 004248 585 KVSHARLVPLLGHCMER-ENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVH 663 (766)
Q Consensus 585 ~l~H~niv~l~~~~~~~-~~~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH 663 (766)
+++||||+++++++... ++..|+||||+++|+|.+++.. ..+++.++..++.|++.||+|||+. +|+|
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~--------~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH 160 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL--------KPLSEDQARFYFQDLIKGIEYLHYQ---KIIH 160 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS--------SCCCHHHHHHHHHHHHHHHHHHHHT---TEEC
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc--------CCCCHHHHHHHHHHHHHHHHHHHHC---Ceec
Confidence 99999999999987652 4578999999999999887642 2489999999999999999999998 9999
Q ss_pred cCCCCCCeeeCCCCcEEeccchhhhhcCCC---CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHh
Q 004248 664 RDVQASSILLDDKFEVRLGSLSEVCAQGGD---AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAI 740 (766)
Q Consensus 664 rDlKp~NILl~~~~~~kl~DFG~a~~~~~~---~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ell 740 (766)
|||||+|||++.++.+||+|||+++..... .....+|+.|+|||........+ .+.++|||||||++|||+
T Consensus 161 ~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~------~~~~~Di~slG~~l~~l~ 234 (298)
T 2zv2_A 161 RDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIF------SGKALDVWAMGVTLYCFV 234 (298)
T ss_dssp CCCCGGGEEECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCE------ESHHHHHHHHHHHHHHHH
T ss_pred cCCCHHHEEECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCC------CCchhhhHhHHHHHHHHH
Confidence 999999999999999999999999876432 23457899999999886544322 368899999999999999
Q ss_pred cCCCCCCCC
Q 004248 741 FNNHLNLSS 749 (766)
Q Consensus 741 tG~~p~~~~ 749 (766)
||+.||...
T Consensus 235 ~g~~pf~~~ 243 (298)
T 2zv2_A 235 FGQCPFMDE 243 (298)
T ss_dssp HSSCSSCCS
T ss_pred HCCCCCCCc
Confidence 999999643
No 52
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=2.8e-37 Score=332.15 Aligned_cols=199 Identities=16% Similarity=0.196 Sum_probs=169.8
Q ss_pred hCCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC--HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEE
Q 004248 533 TGDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK--TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVY 609 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~--~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~ 609 (766)
.++|+..+.||+|+||.||+|+. .+++.||||++...... .+.+.+|++++++++|||||++++++.+ ++..|+||
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~-~~~~~lv~ 84 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRRE-GNIQYLFL 84 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEEC-SSEEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEec-CCeEEEEE
Confidence 36789999999999999999995 47899999999654432 4678999999999999999999998765 56889999
Q ss_pred eeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhh
Q 004248 610 KYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCA 689 (766)
Q Consensus 610 Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~ 689 (766)
||+++|+|.+++.... .+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 85 e~~~~~~L~~~l~~~~-------~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 154 (323)
T 3tki_A 85 EYCSGGELFDRIEPDI-------GMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATV 154 (323)
T ss_dssp ECCTTEEGGGGSBTTT-------BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred EcCCCCcHHHHHhhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeeccce
Confidence 9999999999996543 389999999999999999999998 999999999999999999999999999975
Q ss_pred cC-----CCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCCc
Q 004248 690 QG-----GDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSSR 750 (766)
Q Consensus 690 ~~-----~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~~ 750 (766)
.. .......||+.|+|||.+....+ .+.++|||||||++|||+||+.||....
T Consensus 155 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~--------~~~~~DiwslG~il~~ll~g~~pf~~~~ 212 (323)
T 3tki_A 155 FRYNNRERLLNKMCGTLPYVAPELLKRREF--------HAEPVDVWSCGIVLTAMLAGELPWDQPS 212 (323)
T ss_dssp CEETTEECCBCSCCSCGGGSCHHHHHCSSB--------CHHHHHHHHHHHHHHHHHHSSCSCSSSC
T ss_pred eccCCcccccCCCccCcCccCcHHhccCCC--------CCCcccHHHHHHHHHHHHhCCCCCCCCc
Confidence 42 12234578999999998765443 3679999999999999999999996543
No 53
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=5.8e-37 Score=325.14 Aligned_cols=197 Identities=18% Similarity=0.200 Sum_probs=167.1
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC----HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK----TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLV 608 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~----~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV 608 (766)
++|+..+.||+|+||.||+|+. .+++.||+|++...... .++|.+|++++++++||||+++++++.. ++..|+|
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~-~~~~~lv 89 (294)
T 4eqm_A 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEE-DDCYYLV 89 (294)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEEC-SSEEEEE
T ss_pred ccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeee-CCeEEEE
Confidence 5688999999999999999994 57899999998653322 4678999999999999999999997765 5689999
Q ss_pred EeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhh
Q 004248 609 YKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVC 688 (766)
Q Consensus 609 ~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~ 688 (766)
|||+++|+|.+++...+ .+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 90 ~e~~~g~~L~~~l~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~ 159 (294)
T 4eqm_A 90 MEYIEGPTLSEYIESHG-------PLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAK 159 (294)
T ss_dssp EECCCSCBHHHHHHHHC-------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCSSST
T ss_pred EeCCCCCCHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCCCcc
Confidence 99999999999997654 389999999999999999999998 99999999999999999999999999998
Q ss_pred hcCCC----CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCCc
Q 004248 689 AQGGD----AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSSR 750 (766)
Q Consensus 689 ~~~~~----~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~~ 750 (766)
..... .....+|+.|+|||...... ++.++||||+||++|||+||+.||....
T Consensus 160 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---------~~~~~Di~slG~~l~~ll~g~~pf~~~~ 216 (294)
T 4eqm_A 160 ALSETSLTQTNHVLGTVQYFSPEQAKGEA---------TDECTDIYSIGIVLYEMLVGEPPFNGET 216 (294)
T ss_dssp TC-------------CCSSCCHHHHHTCC---------CCTTHHHHHHHHHHHHHHHSSCSSCSSC
T ss_pred ccccccccccCccccCccccCHhHhcCCC---------CCchHhHHHHHHHHHHHHhCCCCCCCCC
Confidence 65322 22346899999999876543 4789999999999999999999996543
No 54
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=9e-37 Score=323.10 Aligned_cols=200 Identities=18% Similarity=0.210 Sum_probs=169.5
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC---HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK---TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVY 609 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~---~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~ 609 (766)
++|+..+.||+|+||.||+|+. .+|+.||||++...... .+.+.+|++++++++|||||++++++.+ ++..++||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~ 80 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHS-DKKLTLVF 80 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEE-TTEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEe-CCEEEEEE
Confidence 5788899999999999999995 56899999999754432 4678999999999999999999998766 57899999
Q ss_pred eeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhh
Q 004248 610 KYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCA 689 (766)
Q Consensus 610 Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~ 689 (766)
||+++ ++.+.+.... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 81 e~~~~-~l~~~~~~~~------~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~ 150 (292)
T 3o0g_A 81 EFCDQ-DLKKYFDSCN------GDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARA 150 (292)
T ss_dssp ECCSE-EHHHHHHHTT------TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred ecCCC-CHHHHHHhCC------CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeeccccee
Confidence 99985 6666665432 2489999999999999999999998 999999999999999999999999999986
Q ss_pred cCC---CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCCccc
Q 004248 690 QGG---DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSSRFG 752 (766)
Q Consensus 690 ~~~---~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~~~~ 752 (766)
.+. ......+|..|+|||....... ++.++||||+||++|||+||+.|++.....
T Consensus 151 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~--------~~~~~DiwslG~il~~l~~~~~p~~~~~~~ 208 (292)
T 3o0g_A 151 FGIPVRCYSAEVVTLWYRPPDVLFGAKL--------YSTSIDMWSAGCIFAELANAGRPLFPGNDV 208 (292)
T ss_dssp CCSCCSCCCSCCSCGGGCCHHHHTTCSC--------CCTHHHHHHHHHHHHHHTTTSCCSCCCSSH
T ss_pred cCCccccccCCccccCCcChHHHcCCCC--------cCchHHHHHHHHHHHHHHHcCCCCcCCCCH
Confidence 532 2344577999999998755432 478999999999999999999997655443
No 55
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=9.8e-37 Score=333.10 Aligned_cols=197 Identities=17% Similarity=0.210 Sum_probs=170.4
Q ss_pred hCCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC---HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEE
Q 004248 533 TGDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK---TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLV 608 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~---~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV 608 (766)
.++|+..+.||+|+||.||+|.. .+|+.||||++...... .+.+.+|++++++++|||||++++++.+ ++..|+|
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~-~~~~~lv 106 (362)
T 2bdw_A 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE-ESFHYLV 106 (362)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEC-SSEEEEE
T ss_pred ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEe-CCEEEEE
Confidence 45689999999999999999995 56899999999765433 4578999999999999999999998765 5689999
Q ss_pred EeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCC---CcEEeccch
Q 004248 609 YKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDK---FEVRLGSLS 685 (766)
Q Consensus 609 ~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~---~~~kl~DFG 685 (766)
|||+++|+|.+++..+. .+++.++..++.||+.||+|||+. +|+||||||+|||++.+ +.+||+|||
T Consensus 107 ~e~~~gg~L~~~l~~~~-------~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~DfG 176 (362)
T 2bdw_A 107 FDLVTGGELFEDIVARE-------FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFG 176 (362)
T ss_dssp ECCCCSCBHHHHHTTCS-------CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEECCCT
T ss_pred EecCCCCCHHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEeecC
Confidence 99999999999997543 389999999999999999999998 99999999999999865 459999999
Q ss_pred hhhhcCCC--CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 686 EVCAQGGD--AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 686 ~a~~~~~~--~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
+++..... .....||+.|+|||...... ++.++|||||||++|||+||+.||...
T Consensus 177 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~---------~~~~~DiwslG~il~~ll~g~~Pf~~~ 233 (362)
T 2bdw_A 177 LAIEVNDSEAWHGFAGTPGYLSPEVLKKDP---------YSKPVDIWACGVILYILLVGYPPFWDE 233 (362)
T ss_dssp TCBCCTTCCSCCCSCSCTTTCCHHHHTTCC---------CCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cceEecCCcccccCCCCccccCHHHHccCC---------CCchhhHHHHHHHHHHHHHCCCCCCCC
Confidence 99876432 33457899999999876543 478999999999999999999999543
No 56
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=5.5e-37 Score=335.90 Aligned_cols=196 Identities=19% Similarity=0.206 Sum_probs=163.0
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC----HHHHHHHHHH-HhhcCCCCcccceeEEEecCCcEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK----TEAYLLELDF-FSKVSHARLVPLLGHCMERENEKFL 607 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~----~~~~~~E~~~-l~~l~H~niv~l~~~~~~~~~~~~l 607 (766)
++|+..++||+|+||.||+|+. .+++.||||+++..... .+.+.+|..+ ++.++|||||++++++.. ++..|+
T Consensus 38 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~-~~~~~l 116 (373)
T 2r5t_A 38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQT-ADKLYF 116 (373)
T ss_dssp GGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEEC-SSEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEe-CCEEEE
Confidence 5688999999999999999995 56889999999765432 3457778877 577899999999997765 578999
Q ss_pred EEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhh
Q 004248 608 VYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEV 687 (766)
Q Consensus 608 V~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a 687 (766)
||||+++|+|.+++.+.+ .+++..+..++.||+.||+|||+. +|+||||||+|||++.++++||+|||++
T Consensus 117 v~E~~~gg~L~~~l~~~~-------~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~DFG~a 186 (373)
T 2r5t_A 117 VLDYINGGELFYHLQRER-------CFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLC 186 (373)
T ss_dssp EEECCCSCBHHHHHHHHS-------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCBC
T ss_pred EEeCCCCCcHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEeeCccc
Confidence 999999999999997654 388999999999999999999998 9999999999999999999999999999
Q ss_pred hhc---CCCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 688 CAQ---GGDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 688 ~~~---~~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
+.. .......+||+.|+|||.+.... ++.++|||||||++|||++|+.||...
T Consensus 187 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---------~~~~~DiwslG~il~ell~G~~Pf~~~ 242 (373)
T 2r5t_A 187 KENIEHNSTTSTFCGTPEYLAPEVLHKQP---------YDRTVDWWCLGAVLYEMLYGLPPFYSR 242 (373)
T ss_dssp GGGBCCCCCCCSBSCCCCCCCHHHHTTCC---------CCTHHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred cccccCCCccccccCCccccCHHHhCCCC---------CCchhhhHHHHHHHHHHHcCCCCCCCC
Confidence 864 22345568999999999876544 478999999999999999999999643
No 57
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=7.8e-37 Score=333.82 Aligned_cols=198 Identities=14% Similarity=0.102 Sum_probs=163.9
Q ss_pred hCCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccCHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEee
Q 004248 533 TGDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKY 611 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey 611 (766)
.++|+..+.||+|+||.||+|+. .+++.||||++.......+.+.+|+.++++++|||||++++++.. ++..++||||
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~~lv~e~ 97 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILT-PTHLAIIMEY 97 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSCHHHHHHHHHHHHCCCTTBCCEEEEEEC-SSEEEEEEEC
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccccHHHHHHHHHHHhCCCCCCCcEEEEEee-CCEEEEEEEe
Confidence 35788999999999999999995 479999999998766556789999999999999999999998775 5689999999
Q ss_pred CCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCc--EEeccchhhhh
Q 004248 612 MPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFE--VRLGSLSEVCA 689 (766)
Q Consensus 612 ~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~--~kl~DFG~a~~ 689 (766)
+++|+|.+++...+ .+++..+..++.|++.||+|||+. +|+||||||+|||++.++. +||+|||+++.
T Consensus 98 ~~~~~L~~~l~~~~-------~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~ 167 (361)
T 3uc3_A 98 ASGGELYERICNAG-------RFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSKS 167 (361)
T ss_dssp CCSCBHHHHHHHHS-------SCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCCCC--
T ss_pred CCCCCHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecCcccc
Confidence 99999999997654 389999999999999999999998 9999999999999987765 99999999975
Q ss_pred c--CCCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 690 Q--GGDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 690 ~--~~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
. ........+|+.|+|||.+....+ .+.++||||+||++|||+||+.||...
T Consensus 168 ~~~~~~~~~~~gt~~y~aPE~~~~~~~--------~~~~~DiwslG~il~ell~g~~Pf~~~ 221 (361)
T 3uc3_A 168 SVLHSQPKSTVGTPAYIAPEVLLRQEY--------DGKIADVWSCGVTLYVMLVGAYPFEDP 221 (361)
T ss_dssp -------------CTTSCHHHHHCSSC--------CHHHHHHHHHHHHHHHHHHSSCSCC--
T ss_pred ccccCCCCCCcCCCCcCChhhhcCCCC--------CCCeeeeehhHHHHHHHHhCCCCCCCC
Confidence 4 233345678999999998765543 245589999999999999999999643
No 58
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=8.3e-37 Score=326.36 Aligned_cols=199 Identities=21% Similarity=0.295 Sum_probs=162.8
Q ss_pred hCCCCccceeecCCcceEEEEEEcCCcEEEEEEeeccccC---HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEE
Q 004248 533 TGDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVK---TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVY 609 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~---~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~ 609 (766)
.++|+..+.||+|+||.||+|+. +|+.||||++...... .++|.+|++++++++|||||++++++.. .+..++||
T Consensus 36 ~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~~lv~ 113 (309)
T 3p86_A 36 WCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQ-PPNLSIVT 113 (309)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-TTCCEEEE
T ss_pred hhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE-CCceEEEE
Confidence 45788899999999999999986 5789999999765433 4579999999999999999999998765 56789999
Q ss_pred eeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCC--eEecCCCCCCeeeCCCCcEEeccchhh
Q 004248 610 KYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLP--FVHRDVQASSILLDDKFEVRLGSLSEV 687 (766)
Q Consensus 610 Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~--iiHrDlKp~NILl~~~~~~kl~DFG~a 687 (766)
||+++|+|.+++.+... ...+++.++..++.|++.||+|||+. + |+||||||+||+++.++.+||+|||++
T Consensus 114 e~~~~~~L~~~l~~~~~----~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a 186 (309)
T 3p86_A 114 EYLSRGSLYRLLHKSGA----REQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVKVCDFGLS 186 (309)
T ss_dssp ECCTTCBHHHHHHSTTH----HHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEEECCCC--
T ss_pred ecCCCCcHHHHHhhcCC----CCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEEECCCCCC
Confidence 99999999999975431 12489999999999999999999997 6 999999999999999999999999999
Q ss_pred hhcCCC---CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 688 CAQGGD---AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 688 ~~~~~~---~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
+..... .....+|..|+|||...... ++.++|||||||++|||+||+.||...
T Consensus 187 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---------~~~~~DiwslG~il~elltg~~Pf~~~ 242 (309)
T 3p86_A 187 RLKASTFLSSKSAAGTPEWMAPEVLRDEP---------SNEKSDVYSFGVILWELATLQQPWGNL 242 (309)
T ss_dssp ---------------CCTTSCHHHHTTCC---------CCTTHHHHHHHHHHHHHHHCCCTTTTS
T ss_pred ccccccccccccCCCCccccChhhhcCCC---------CCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 765332 33457899999999876544 468999999999999999999999643
No 59
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=1.1e-36 Score=321.80 Aligned_cols=196 Identities=18% Similarity=0.273 Sum_probs=167.0
Q ss_pred CCCCccceeecCCcceEEEEEEcCCcEEEEEEeeccccC---HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEe
Q 004248 534 GDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVK---TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYK 610 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~---~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~E 610 (766)
++|+..+.||+|+||.||+|+..+|+.||||++...... .+.+.+|++++++++||||+++++++.. ++..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e 80 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHT-KKRLVLVFE 80 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEEC-SSCEEEEEE
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEcc-CCeEEEEEE
Confidence 568889999999999999999888999999999654322 4678999999999999999999998765 568999999
Q ss_pred eCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhc
Q 004248 611 YMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQ 690 (766)
Q Consensus 611 y~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~ 690 (766)
|+++ +|.+++..... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 81 ~~~~-~l~~~~~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 150 (288)
T 1ob3_A 81 HLDQ-DLKKLLDVCEG------GLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAF 150 (288)
T ss_dssp CCSE-EHHHHHHTSTT------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHH
T ss_pred ecCC-CHHHHHHhccc------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECcccccc
Confidence 9985 99999875432 489999999999999999999998 9999999999999999999999999999876
Q ss_pred CCC---CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 691 GGD---AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 691 ~~~---~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
+.. .....+|+.|+|||....... ++.++||||+||++|||+||+.||..
T Consensus 151 ~~~~~~~~~~~~t~~y~aPE~~~~~~~--------~~~~~DiwslG~il~~l~~g~~pf~~ 203 (288)
T 1ob3_A 151 GIPVRKYTHEIVTLWYRAPDVLMGSKK--------YSTTIDIWSVGCIFAEMVNGTPLFPG 203 (288)
T ss_dssp CC---------CCCTTCCHHHHTTCCS--------CCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred CccccccccccccccccCchheeCCCC--------CCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 422 334567999999998754321 57899999999999999999999954
No 60
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=1.7e-36 Score=325.13 Aligned_cols=203 Identities=21% Similarity=0.330 Sum_probs=157.7
Q ss_pred hCCCCccceeecCCcceEEEEEE-cCCcEEEEEEeecccc--CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEE
Q 004248 533 TGDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV--KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVY 609 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~ 609 (766)
.++|+..+.||+|+||.||+|.. .+|+.||||+++.... ..+.+.+|++++++++|||||++++++.. ++..++||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~~lv~ 82 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHT-ENKLTLVF 82 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECC-TTEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEE-CCeEEEEE
Confidence 46789999999999999999984 5789999999975433 25679999999999999999999997765 56899999
Q ss_pred eeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhh
Q 004248 610 KYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCA 689 (766)
Q Consensus 610 Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~ 689 (766)
||++ |+|.+++...... .....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 83 e~~~-~~L~~~l~~~~~~-~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~ 157 (317)
T 2pmi_A 83 EFMD-NDLKKYMDSRTVG-NTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARA 157 (317)
T ss_dssp ECCC-CBHHHHHHHHHSS-SCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCSSCEE
T ss_pred EecC-CCHHHHHHhcccc-ccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcCcccee
Confidence 9998 6999998754211 1123589999999999999999999998 999999999999999999999999999986
Q ss_pred cCC---CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 690 QGG---DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 690 ~~~---~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
... ......+|..|+|||.+..... ++.++|||||||++|||+||+.||...
T Consensus 158 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~--------~~~~~DiwslG~il~el~~g~~pf~~~ 212 (317)
T 2pmi_A 158 FGIPVNTFSSEVVTLWYRAPDVLMGSRT--------YSTSIDIWSCGCILAEMITGKPLFPGT 212 (317)
T ss_dssp TTSCCCCCCCCCSCCTTCCHHHHTTCCC--------CCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred cCCCcccCCCCcccccccCchHhhCCCC--------CCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 532 2334578999999998754321 578999999999999999999999543
No 61
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=1e-36 Score=328.38 Aligned_cols=196 Identities=16% Similarity=0.160 Sum_probs=162.2
Q ss_pred CCCCccceeecCCcceEEEEEE----cCCcEEEEEEeecccc-----CHHHHHHHHHHHhhcCCCCcccceeEEEecCCc
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL----EGGIPVVIKRIDLQSV-----KTEAYLLELDFFSKVSHARLVPLLGHCMERENE 604 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~----~~g~~vavK~l~~~~~-----~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 604 (766)
++|+..+.||+|+||.||+|+. .+|+.||||+++.... ..+.+.+|++++++++|||||++++++.. ++.
T Consensus 17 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~ 95 (327)
T 3a62_A 17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQT-GGK 95 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEEC-SSC
T ss_pred HHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEc-CCE
Confidence 5688899999999999999986 5789999999975432 24568899999999999999999997765 568
Q ss_pred EEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccc
Q 004248 605 KFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684 (766)
Q Consensus 605 ~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DF 684 (766)
.|+||||+++|+|.+++.+.+ .+++.++..++.||+.||+|||+. +|+||||||+|||++.++.+||+||
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~~-------~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~Df 165 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLEREG-------IFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDF 165 (327)
T ss_dssp EEEEEECCTTEEHHHHHHHHS-------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEEECCC
T ss_pred EEEEEeCCCCCcHHHHHHhCC-------CCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEEEEeC
Confidence 999999999999999997654 389999999999999999999998 9999999999999999999999999
Q ss_pred hhhhhcC---CCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 685 SEVCAQG---GDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 685 G~a~~~~---~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
|+++... .......||..|+|||...... ++.++|||||||++|||++|+.||...
T Consensus 166 g~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---------~~~~~DiwslG~il~el~~g~~pf~~~ 224 (327)
T 3a62_A 166 GLCKESIHDGTVTHTFCGTIEYMAPEILMRSG---------HNRAVDWWSLGALMYDMLTGAPPFTGE 224 (327)
T ss_dssp SCC----------CTTSSCCTTSCHHHHTTSC---------CCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred CcccccccCCccccccCCCcCccCHhhCcCCC---------CCCcccchhHHHHHHHHHHCCCCCCCC
Confidence 9997542 2234457899999999876543 478999999999999999999999643
No 62
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=1.1e-36 Score=348.22 Aligned_cols=199 Identities=20% Similarity=0.196 Sum_probs=172.8
Q ss_pred hCCCCccceeecCCcceEEEEEE-cCCcEEEEEEeecccc----CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEE
Q 004248 533 TGDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV----KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFL 607 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~----~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~l 607 (766)
.++|+..++||+|+||.||+|+. .+|+.||||++..... ..+.+.+|+++|++++|||||++++++.+ ++..|+
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~-~~~l~l 261 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYET-KDALCL 261 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-SSEEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEee-CCEEEE
Confidence 35688899999999999999995 5799999999975432 25678999999999999999999997765 568999
Q ss_pred EEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhh
Q 004248 608 VYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEV 687 (766)
Q Consensus 608 V~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a 687 (766)
|||||++|+|.+++...+. ..+++..+..|+.||+.||+|||+. +||||||||+|||++.++.+||+|||++
T Consensus 262 VmEy~~gg~L~~~l~~~~~-----~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DFGla 333 (576)
T 2acx_A 262 VLTLMNGGDLKFHIYHMGQ-----AGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLA 333 (576)
T ss_dssp EECCCCSCBHHHHHHSSSS-----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTC
T ss_pred EEEcCCCCcHHHHHHhcCC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEecccc
Confidence 9999999999999975432 3489999999999999999999998 9999999999999999999999999999
Q ss_pred hhcCCC--CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 688 CAQGGD--AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 688 ~~~~~~--~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
+..... ....+||+.|+|||.+.... ++.++|||||||++|||+||+.||...
T Consensus 334 ~~~~~~~~~~~~~GT~~Y~APEvl~~~~---------~~~~~DiwSLGvilyeLltG~~PF~~~ 388 (576)
T 2acx_A 334 VHVPEGQTIKGRVGTVGYMAPEVVKNER---------YTFSPDWWALGCLLYEMIAGQSPFQQR 388 (576)
T ss_dssp EECCTTCCEECCCSCGGGCCHHHHTTCE---------ESSHHHHHHHHHHHHHHHHSSCSSSCS
T ss_pred eecccCccccccCCCccccCHHHHcCCC---------CCccchHHHHHHHHHHHHhCCCCCccc
Confidence 876332 34467899999999886543 478999999999999999999999654
No 63
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.8e-36 Score=324.81 Aligned_cols=196 Identities=14% Similarity=0.156 Sum_probs=170.5
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeecccc-------CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcE
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV-------KTEAYLLELDFFSKVSHARLVPLLGHCMERENEK 605 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-------~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 605 (766)
++|...+.||+|+||.||+|.. .+|+.||||.+..... ..+++.+|++++++++|||||++++++.. ++..
T Consensus 11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~ 89 (326)
T 2y0a_A 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYEN-KTDV 89 (326)
T ss_dssp HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-SSEE
T ss_pred cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEe-CCEE
Confidence 4588899999999999999995 5689999999975432 25689999999999999999999998765 5689
Q ss_pred EEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCC----cEEe
Q 004248 606 FLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKF----EVRL 681 (766)
Q Consensus 606 ~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~----~~kl 681 (766)
++||||+++|+|.+++.... .+++.++..++.|++.||+|||+. +|+||||||+|||++.++ .+||
T Consensus 90 ~lv~e~~~~~~L~~~l~~~~-------~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl 159 (326)
T 2y0a_A 90 ILILELVAGGELFDFLAEKE-------SLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKI 159 (326)
T ss_dssp EEEEECCCSCBHHHHHTTSS-------CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSCCEEE
T ss_pred EEEEEcCCCCCHHHHHHhcC-------CcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCCCEEE
Confidence 99999999999999997543 389999999999999999999998 999999999999999887 8999
Q ss_pred ccchhhhhcC--CCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 682 GSLSEVCAQG--GDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 682 ~DFG~a~~~~--~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
+|||+++... .......+|+.|+|||...... ++.++|||||||++|||+||+.||...
T Consensus 160 ~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~---------~~~~~DiwslG~il~~ll~g~~pf~~~ 220 (326)
T 2y0a_A 160 IDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEP---------LGLEADMWSIGVITYILLSGASPFLGD 220 (326)
T ss_dssp CCCTTCEECCTTSCCCCCCSCTTTCCHHHHTTCC---------CCTHHHHHHHHHHHHHHHHSCCSSCCS
T ss_pred EECCCCeECCCCCccccccCCcCcCCceeecCCC---------CCcHHHHHHHHHHHHHHHHCcCCCCCC
Confidence 9999998763 2334567899999999875443 478999999999999999999999543
No 64
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=1.5e-36 Score=332.69 Aligned_cols=203 Identities=13% Similarity=0.260 Sum_probs=169.1
Q ss_pred CCCCccceeecCCcceEEEEEE--------cCCcEEEEEEeeccccC--HHHHHHHHHHHhhc-CCCCcccceeEEEecC
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL--------EGGIPVVIKRIDLQSVK--TEAYLLELDFFSKV-SHARLVPLLGHCMERE 602 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~--------~~g~~vavK~l~~~~~~--~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~ 602 (766)
++|...+.||+|+||.||+|+. .++..||||+++..... .+++.+|+++++++ +|||||+++++|.+ +
T Consensus 81 ~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~-~ 159 (370)
T 2psq_A 81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ-D 159 (370)
T ss_dssp GGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECS-S
T ss_pred HHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEcc-C
Confidence 5688889999999999999984 23568999999754332 46799999999999 89999999998765 5
Q ss_pred CcEEEEEeeCCCCChhhhhhccCCCC---------CcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeee
Q 004248 603 NEKFLVYKYMPNGDLSSSLYRKTNTE---------DDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILL 673 (766)
Q Consensus 603 ~~~~lV~Ey~~~GsL~~~l~~~~~~~---------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl 673 (766)
+..|+||||+++|+|.+++....... .....+++.++..++.||++||+|||+. +||||||||+|||+
T Consensus 160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll 236 (370)
T 2psq_A 160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLV 236 (370)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEE
T ss_pred CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchhhEEE
Confidence 68999999999999999998653210 0123589999999999999999999998 99999999999999
Q ss_pred CCCCcEEeccchhhhhcCCC-----CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCC
Q 004248 674 DDKFEVRLGSLSEVCAQGGD-----AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNL 747 (766)
Q Consensus 674 ~~~~~~kl~DFG~a~~~~~~-----~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~ 747 (766)
+.++.+||+|||+++..... .....+|..|+|||.+.... ++.++|||||||++|||+| |+.||.
T Consensus 237 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~---------~~~~~DvwslG~il~ellt~g~~p~~ 307 (370)
T 2psq_A 237 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRV---------YTHQSDVWSFGVLMWEIFTLGGSPYP 307 (370)
T ss_dssp CTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCC---------CCHHHHHHHHHHHHHHHHTTSCCSST
T ss_pred CCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCC---------CCcHHHHHHHHHHHHHHHcCCCCCCC
Confidence 99999999999999865321 23345678899999876543 5789999999999999999 999985
Q ss_pred CC
Q 004248 748 SS 749 (766)
Q Consensus 748 ~~ 749 (766)
..
T Consensus 308 ~~ 309 (370)
T 2psq_A 308 GI 309 (370)
T ss_dssp TC
T ss_pred CC
Confidence 43
No 65
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1.5e-36 Score=317.42 Aligned_cols=197 Identities=20% Similarity=0.297 Sum_probs=172.0
Q ss_pred CCCCccceeecCCcceEEEEEEcCCcEEEEEEeeccccCHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEeeCC
Q 004248 534 GDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMP 613 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey~~ 613 (766)
++|+..+.||+|+||.||+|+..+++.||||++.......+++.+|++++++++||||+++++++.+ ++..++||||++
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~~ 88 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE-QAPICLVFEFME 88 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECS-SSSEEEEEECCT
T ss_pred hhceeeheecCCCccEEEEEEecCCCeEEEEEecccccCHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCceEEEEEeCC
Confidence 4678889999999999999998889999999998776667889999999999999999999998765 567999999999
Q ss_pred CCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcCCC
Q 004248 614 NGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGD 693 (766)
Q Consensus 614 ~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~~~ 693 (766)
+|+|.+++..... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 89 ~~~L~~~l~~~~~------~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 159 (269)
T 4hcu_A 89 HGCLSDYLRTQRG------LFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD 159 (269)
T ss_dssp TCBHHHHHHTTTT------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCH
T ss_pred CCcHHHHHHhcCc------ccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEecccccccccccc
Confidence 9999999975432 489999999999999999999998 9999999999999999999999999999865321
Q ss_pred ----CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCCC
Q 004248 694 ----AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLSS 749 (766)
Q Consensus 694 ----~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~~ 749 (766)
.....+|..|+|||...... ++.++||||+||++|||+| |+.||...
T Consensus 160 ~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~Di~slG~~l~~ll~~g~~p~~~~ 211 (269)
T 4hcu_A 160 QYTSSTGTKFPVKWASPEVFSFSR---------YSSKSDVWSFGVLMWEVFSEGKIPYENR 211 (269)
T ss_dssp HHHSTTSTTCCGGGCCHHHHHHCC---------CCHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred ccccccCcccccccCCHHHhcCCC---------CCchhhhHHHHHHHHHHhcCCCCCCCCC
Confidence 22344577899999875443 4789999999999999999 99998543
No 66
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=2e-36 Score=329.39 Aligned_cols=199 Identities=20% Similarity=0.249 Sum_probs=169.6
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccc------cCHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQS------VKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKF 606 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~------~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~ 606 (766)
++|+..+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|++++++++|||||++++++.+ ++..|
T Consensus 24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~-~~~~~ 102 (351)
T 3c0i_A 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSS-DGMLY 102 (351)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEE-TTEEE
T ss_pred cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEe-CCEEE
Confidence 3588899999999999999985 579999999996432 135789999999999999999999998766 57899
Q ss_pred EEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCc---EEecc
Q 004248 607 LVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFE---VRLGS 683 (766)
Q Consensus 607 lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~---~kl~D 683 (766)
+|||||++|+|.+.+.+... ....+++..+..++.||+.||+|||+. +|+||||||+|||++.++. +||+|
T Consensus 103 lv~e~~~g~~L~~~l~~~~~---~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~vkl~D 176 (351)
T 3c0i_A 103 MVFEFMDGADLCFEIVKRAD---AGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGG 176 (351)
T ss_dssp EEEECCSSCBHHHHHHHHHH---TTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCEEECC
T ss_pred EEEeCCCCCCHHHHHHHhcc---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcEEEec
Confidence 99999999999988865321 113489999999999999999999998 9999999999999987655 99999
Q ss_pred chhhhhcCCC---CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 684 LSEVCAQGGD---AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 684 FG~a~~~~~~---~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
||+++..... .....+|+.|+|||.+.... ++.++||||+||++|||+||+.||..
T Consensus 177 fg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---------~~~~~DiwslG~il~~ll~g~~pf~~ 235 (351)
T 3c0i_A 177 FGVAIQLGESGLVAGGRVGTPHFMAPEVVKREP---------YGKPVDVWGCGVILFILLSGCLPFYG 235 (351)
T ss_dssp CTTCEECCTTSCBCCCCCSCGGGCCHHHHTTCC---------BCTHHHHHHHHHHHHHHHHSSCSSCS
T ss_pred CcceeEecCCCeeecCCcCCcCccCHHHHcCCC---------CCchHhhHHHHHHHHHHHHCCCCCCC
Confidence 9999876432 23457899999999876544 47899999999999999999999964
No 67
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=2.2e-36 Score=338.56 Aligned_cols=197 Identities=14% Similarity=0.147 Sum_probs=169.3
Q ss_pred hCCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC---HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEE
Q 004248 533 TGDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK---TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLV 608 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~---~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV 608 (766)
.++|+..+.||+|+||.||+|.. .+|+.||+|++...... .+.+.+|++++++++|||||++++++.+ ++..|+|
T Consensus 10 ~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~~lv 88 (444)
T 3soa_A 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISE-EGHHYLI 88 (444)
T ss_dssp HHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEEC-SSEEEEE
T ss_pred cCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEE-CCEEEEE
Confidence 45689999999999999999984 67999999999765432 4578999999999999999999997765 6789999
Q ss_pred EeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeC---CCCcEEeccch
Q 004248 609 YKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLD---DKFEVRLGSLS 685 (766)
Q Consensus 609 ~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~---~~~~~kl~DFG 685 (766)
||||++|+|.+.+..+. .+++.++..++.||+.||+|||+. +|+||||||+|||++ .++.+||+|||
T Consensus 89 ~E~~~gg~L~~~i~~~~-------~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vkL~DFG 158 (444)
T 3soa_A 89 FDLVTGGELFEDIVARE-------YYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADFG 158 (444)
T ss_dssp ECCCBCCBHHHHHHHCS-------CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEEECCCS
T ss_pred EEeCCCCCHHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEEEccCc
Confidence 99999999999997654 389999999999999999999998 999999999999998 46789999999
Q ss_pred hhhhcCCC---CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 686 EVCAQGGD---AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 686 ~a~~~~~~---~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
+++..... .....||+.|+|||.+.... ++.++||||+||++|||++|+.||...
T Consensus 159 ~a~~~~~~~~~~~~~~gt~~Y~APE~l~~~~---------~~~~~DIwSlGvilyell~G~~Pf~~~ 216 (444)
T 3soa_A 159 LAIEVEGEQQAWFGFAGTPGYLSPEVLRKDP---------YGKPVDLWACGVILYILLVGYPPFWDE 216 (444)
T ss_dssp SCBCCCTTCCBCCCSCSCGGGCCHHHHTTCC---------BCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred eeEEecCCCceeecccCCcccCCHHHhcCCC---------CCCccccHHHHHHHHHHHhCCCCCCCc
Confidence 99776432 23457899999999876544 478999999999999999999999543
No 68
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=2.3e-36 Score=339.99 Aligned_cols=198 Identities=21% Similarity=0.328 Sum_probs=169.5
Q ss_pred hCCCCccceeecCCcceEEEEEEcCCcEEEEEEeeccccCHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEeeC
Q 004248 533 TGDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYM 612 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey~ 612 (766)
.++|+..+.||+|+||.||+|... |+.||||+++... ..++|.+|+++|++++|||||++++++.+.++..|+|||||
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~ 269 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM 269 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT-TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECC
T ss_pred hHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch-HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEec
Confidence 356788899999999999999875 7799999997544 45789999999999999999999998877555799999999
Q ss_pred CCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcCC
Q 004248 613 PNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGG 692 (766)
Q Consensus 613 ~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~~ 692 (766)
++|+|.++++..+. ..+++..+..++.||++||+|||++ +|+||||||+|||+++++.+||+|||+++....
T Consensus 270 ~~g~L~~~l~~~~~-----~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 341 (450)
T 1k9a_A 270 AKGSLVDYLRSRGR-----SVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS 341 (450)
T ss_dssp TTCBHHHHHHHHCT-----TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTCEECC-
T ss_pred CCCcHHHHHHhcCC-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCcccccc
Confidence 99999999986542 2479999999999999999999998 999999999999999999999999999986644
Q ss_pred CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCCC
Q 004248 693 DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLSS 749 (766)
Q Consensus 693 ~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~~ 749 (766)
......++..|+|||.+.... ++.++|||||||++|||+| |+.||...
T Consensus 342 ~~~~~~~~~~y~aPE~~~~~~---------~~~~sDvwslG~~l~el~t~g~~P~~~~ 390 (450)
T 1k9a_A 342 TQDTGKLPVKWTAPEALREKK---------FSTKSDVWSFGILLWEIYSFGRVPYPRI 390 (450)
T ss_dssp -----CCCTTTSCHHHHHSSC---------CCHHHHHHHHHHHHHHHHTTTCCSSTTS
T ss_pred cccCCCCCcceeCHHHhcCCC---------CCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 444445678899999876543 5789999999999999998 99999543
No 69
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=3.4e-36 Score=324.00 Aligned_cols=198 Identities=22% Similarity=0.305 Sum_probs=166.8
Q ss_pred hCCCCccceeecCCcceEEEEEEc-CCcEEEEEEeeccccC--HHHHHHHHHHHhhcCCCCcccceeEEEecCC------
Q 004248 533 TGDFSDANLIKNGHSGDLFRGILE-GGIPVVIKRIDLQSVK--TEAYLLELDFFSKVSHARLVPLLGHCMEREN------ 603 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~--~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~------ 603 (766)
.++|+..+.||+|+||.||+|+.. +|+.||||+++..... .+.+.+|++++++++|||||++++++.+...
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 84 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE 84 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence 356888999999999999999964 7999999999754432 5789999999999999999999998765321
Q ss_pred --------------------------------------------------cEEEEEeeCCCCChhhhhhccCCCCCcCCC
Q 004248 604 --------------------------------------------------EKFLVYKYMPNGDLSSSLYRKTNTEDDLQS 633 (766)
Q Consensus 604 --------------------------------------------------~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~ 633 (766)
..++|||||++|+|.+++.+... ...
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~----~~~ 160 (332)
T 3qd2_B 85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCS----LED 160 (332)
T ss_dssp HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCS----GGG
T ss_pred hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccC----ccc
Confidence 27999999999999999986542 234
Q ss_pred CCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcCCC---------------Cccce
Q 004248 634 LDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGD---------------AHQSR 698 (766)
Q Consensus 634 l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~~~---------------~~~~~ 698 (766)
.++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++..... .....
T Consensus 161 ~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (332)
T 3qd2_B 161 REHGVCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQV 237 (332)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC
T ss_pred hhhHHHHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccC
Confidence 67888999999999999999998 9999999999999999999999999999876432 12346
Q ss_pred eeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCC
Q 004248 699 ITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLN 746 (766)
Q Consensus 699 ~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~ 746 (766)
+|+.|+|||...... ++.++|||||||++|||+||..|+
T Consensus 238 gt~~y~aPE~~~~~~---------~~~~~Di~slG~il~el~~~~~~~ 276 (332)
T 3qd2_B 238 GTKLYMSPEQIHGNN---------YSHKVDIFSLGLILFELLYSFSTQ 276 (332)
T ss_dssp -CGGGSCHHHHHCCC---------CCTHHHHHHHHHHHHHHHSCCCCH
T ss_pred CCcCccChHHhcCCC---------CcchhhHHHHHHHHHHHHHcCCCh
Confidence 899999999876543 578999999999999999998876
No 70
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=1e-36 Score=326.97 Aligned_cols=209 Identities=18% Similarity=0.190 Sum_probs=170.6
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeecccc--CHHHHHHHHHHHhhcCCCCcccceeEEEecC-CcEEEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV--KTEAYLLELDFFSKVSHARLVPLLGHCMERE-NEKFLVY 609 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~~~lV~ 609 (766)
++|...++||+|+||.||+|+. .+|+.||||++..... ..+.+.+|++++++++||||+++++++.... ...++||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEE
Confidence 4588899999999999999995 4589999999975442 2577899999999999999999999876533 3689999
Q ss_pred eeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeee----CCCCcEEeccch
Q 004248 610 KYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILL----DDKFEVRLGSLS 685 (766)
Q Consensus 610 Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl----~~~~~~kl~DFG 685 (766)
||+++|+|.+++..... ...+++.++..++.|++.||+|||+. +|+||||||+|||+ +.++.+||+|||
T Consensus 89 e~~~~~~L~~~l~~~~~----~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg 161 (319)
T 4euu_A 89 EFCPCGSLYTVLEEPSN----AYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFG 161 (319)
T ss_dssp ECCTTCBHHHHHHSGGG----TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECCCT
T ss_pred eCCCCCCHHHHHHHhcc----ccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEccCC
Confidence 99999999999976432 12389999999999999999999998 99999999999999 888889999999
Q ss_pred hhhhcCCC--CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCCc
Q 004248 686 EVCAQGGD--AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSSR 750 (766)
Q Consensus 686 ~a~~~~~~--~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~~ 750 (766)
+++..... .....+|..|+|||.+....... .....++.++|||||||++|||+||+.||....
T Consensus 162 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~-~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~ 227 (319)
T 4euu_A 162 AARELEDDEQFVSLYGTEEYLHPDMYERAVLRK-DHQKKYGATVDLWSIGVTFYHAATGSLPFRPFE 227 (319)
T ss_dssp TCEECCTTCCBCCCCSCGGGCCHHHHHHHTSCC-CCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTT
T ss_pred CceecCCCCceeecccCCCccCHHHhhhccccc-cccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 99876332 33456899999999764210000 000016889999999999999999999996433
No 71
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=2.6e-36 Score=340.25 Aligned_cols=197 Identities=17% Similarity=0.219 Sum_probs=172.6
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeecccc----CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV----KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLV 608 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~----~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV 608 (766)
++|...+.||+|+||.||+|+. .+|+.||||++..... ..+.+.+|+++++.++||||+++++++.. .+..|+|
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~-~~~~~lv 94 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVIST-PSDIFMV 94 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEEC-SSEEEEE
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEE-CCEEEEE
Confidence 5788899999999999999995 4799999999975432 24679999999999999999999998765 5689999
Q ss_pred EeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhh
Q 004248 609 YKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVC 688 (766)
Q Consensus 609 ~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~ 688 (766)
|||+++|+|.+++.+.+ .+++.++..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 95 ~E~~~gg~L~~~l~~~~-------~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DFG~a~ 164 (476)
T 2y94_A 95 MEYVSGGELFDYICKNG-------RLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSN 164 (476)
T ss_dssp EECCSSEEHHHHTTSSS-------SCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCCSSCE
T ss_pred EeCCCCCcHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEeccchh
Confidence 99999999999997543 389999999999999999999998 99999999999999999999999999998
Q ss_pred hcCC--CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 689 AQGG--DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 689 ~~~~--~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
.... .....+||+.|+|||.+.+..+ .+.++||||+||++|||++|+.||...
T Consensus 165 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~--------~~~~~DiwSlGvil~elltG~~Pf~~~ 219 (476)
T 2y94_A 165 MMSDGEFLRTSCGSPNYAAPEVISGRLY--------AGPEVDIWSSGVILYALLCGTLPFDDD 219 (476)
T ss_dssp ECCTTCCBCCCCSCSTTCCHHHHTTCCB--------CSHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred hccccccccccCCCcCeEChhhccCCCC--------CCCcceehhhHHHHHHHhhCCCCCCCC
Confidence 7633 2345678999999998765543 367999999999999999999999654
No 72
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.8e-36 Score=330.25 Aligned_cols=197 Identities=18% Similarity=0.259 Sum_probs=164.8
Q ss_pred hCCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC---HHHHHHHHHHHhhcCCCCcccceeEEEecC-----C
Q 004248 533 TGDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK---TEAYLLELDFFSKVSHARLVPLLGHCMERE-----N 603 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~---~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-----~ 603 (766)
.++|+..+.||+|+||.||+|.. .+|+.||||++...... .+++.+|++++++++|||||++++++...+ .
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 46788999999999999999995 67999999999653322 467899999999999999999999876432 3
Q ss_pred cEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEecc
Q 004248 604 EKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGS 683 (766)
Q Consensus 604 ~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~D 683 (766)
..|+||||+ +++|.+++... .+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~~--------~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~D 171 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKHE--------KLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILD 171 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHHC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECC
T ss_pred eEEEEEecC-CCCHHHHHhcC--------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEe
Confidence 469999999 78999998752 389999999999999999999998 999999999999999999999999
Q ss_pred chhhhhcCCCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 684 LSEVCAQGGDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 684 FG~a~~~~~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
||+++..........+|++|+|||.+..... ++.++||||+||++|||++|+.||...
T Consensus 172 fg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~--------~~~~~DiwslG~il~ell~g~~pf~~~ 229 (367)
T 1cm8_A 172 FGLARQADSEMTGYVVTRWYRAPEVILNWMR--------YTQTVDIWSVGCIMAEMITGKTLFKGS 229 (367)
T ss_dssp CTTCEECCSSCCSSCSCGGGCCTHHHHTTTC--------CCTTHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred eecccccccccCcCcCCCCcCCHHHHhCCCC--------CChhhhHHHHHHHHHHHHhCCCCCCCC
Confidence 9999887666667788999999998754221 578999999999999999999999543
No 73
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=3.3e-36 Score=343.43 Aligned_cols=200 Identities=19% Similarity=0.214 Sum_probs=172.4
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeecccc----CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV----KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLV 608 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~----~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV 608 (766)
++|...++||+|+||.||+|+. .+|+.||||++..... ..+.+.+|++++++++|||||++++++.. .+..|+|
T Consensus 185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~-~~~l~lV 263 (543)
T 3c4z_A 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFET-KTDLCLV 263 (543)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-SSEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEee-CCEEEEE
Confidence 5688889999999999999996 5799999999975432 24678999999999999999999997655 5689999
Q ss_pred EeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhh
Q 004248 609 YKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVC 688 (766)
Q Consensus 609 ~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~ 688 (766)
|||+++|+|.+++..... ....+++..+..++.||+.||+|||+. +|+||||||+|||++.++++||+|||+++
T Consensus 264 mE~~~gg~L~~~l~~~~~---~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DFGla~ 337 (543)
T 3c4z_A 264 MTIMNGGDIRYHIYNVDE---DNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAV 337 (543)
T ss_dssp ECCCTTCBHHHHHHTSST---TSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCE
T ss_pred EEeccCCCHHHHHHHhhc---ccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeecceee
Confidence 999999999999976432 123599999999999999999999998 99999999999999999999999999998
Q ss_pred hcCCC---CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 689 AQGGD---AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 689 ~~~~~---~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
..... ....+||+.|+|||.+.... ++.++|||||||++|||+||+.||...
T Consensus 338 ~~~~~~~~~~~~~GT~~Y~APE~l~~~~---------~~~~~DiwSlGvilyelltG~~PF~~~ 392 (543)
T 3c4z_A 338 ELKAGQTKTKGYAGTPGFMAPELLLGEE---------YDFSVDYFALGVTLYEMIAARGPFRAR 392 (543)
T ss_dssp ECCTTCCCBCCCCSCTTTSCHHHHTTCC---------BCTHHHHHHHHHHHHHHHHSSCSSCCT
T ss_pred eccCCCcccccccCCccccChhhhcCCC---------CChHHhcCcchHHHHHHHhCCCCCCCC
Confidence 76332 23458999999999886543 478999999999999999999999643
No 74
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=4.2e-36 Score=327.87 Aligned_cols=206 Identities=16% Similarity=0.162 Sum_probs=177.5
Q ss_pred cHHHHHHHhCCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccCHHHHHHHHHHHhhcC-----CCCcccceeEE
Q 004248 525 TYQQLLAATGDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVKTEAYLLELDFFSKVS-----HARLVPLLGHC 598 (766)
Q Consensus 525 ~~~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~-----H~niv~l~~~~ 598 (766)
++++.....++|...++||+|+||.||+|+. .+++.||||++.......+.+.+|++++++++ |||||++++++
T Consensus 26 ~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~ 105 (360)
T 3llt_A 26 SWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNNNIVKYHGKF 105 (360)
T ss_dssp CCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEE
T ss_pred eeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccchhhhhhhHHHHHHHHHhcccCCCCCCeeccccee
Confidence 3333344567899999999999999999995 57899999999755444667889999999996 99999999988
Q ss_pred EecCCcEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCC---
Q 004248 599 MERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDD--- 675 (766)
Q Consensus 599 ~~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~--- 675 (766)
.. .+..++||||+ +|+|.+++..... ..+++.++..++.|++.||+|||+. +||||||||+|||++.
T Consensus 106 ~~-~~~~~lv~e~~-~~~L~~~~~~~~~-----~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~ 175 (360)
T 3llt_A 106 MY-YDHMCLIFEPL-GPSLYEIITRNNY-----NGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLDDPYF 175 (360)
T ss_dssp EE-TTEEEEEECCC-CCBHHHHHHHTTT-----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCTTC
T ss_pred eE-CCeeEEEEcCC-CCCHHHHHHhcCC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEccccc
Confidence 76 56899999999 8999999986543 3489999999999999999999998 9999999999999986
Q ss_pred ----------------------CCcEEeccchhhhhcCCCCccceeeecccCCCCCCCCceeeeeeeeecccccceecch
Q 004248 676 ----------------------KFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHG 733 (766)
Q Consensus 676 ----------------------~~~~kl~DFG~a~~~~~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~G 733 (766)
++.+||+|||+++..........+|+.|+|||.+.... ++.++||||||
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~---------~~~~~DiwslG 246 (360)
T 3llt_A 176 EKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLG---------WDVSSDMWSFG 246 (360)
T ss_dssp CEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCCCSCCSCGGGCCHHHHTTCC---------CCTTHHHHHHH
T ss_pred cccccchhcccccccccccccCCCCEEEEeccCceecCCCCcCccCcccccCcHHHcCCC---------CCCccchHHHH
Confidence 78999999999987766666678899999999886544 47899999999
Q ss_pred HHHHHHhcCCCCCCCC
Q 004248 734 NPLFSAIFNNHLNLSS 749 (766)
Q Consensus 734 vvl~elltG~~p~~~~ 749 (766)
|++|||+||+.||...
T Consensus 247 ~il~ell~g~~pf~~~ 262 (360)
T 3llt_A 247 CVLAELYTGSLLFRTH 262 (360)
T ss_dssp HHHHHHHHSSCSCCCS
T ss_pred HHHHHHHHCCCCCCCC
Confidence 9999999999999543
No 75
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=1.1e-35 Score=317.01 Aligned_cols=210 Identities=28% Similarity=0.447 Sum_probs=179.8
Q ss_pred ccccHHHHHHHhCCCCcc------ceeecCCcceEEEEEEcCCcEEEEEEeecccc-----CHHHHHHHHHHHhhcCCCC
Q 004248 522 ESFTYQQLLAATGDFSDA------NLIKNGHSGDLFRGILEGGIPVVIKRIDLQSV-----KTEAYLLELDFFSKVSHAR 590 (766)
Q Consensus 522 ~~~~~~~l~~~~~~~~~~------~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~-----~~~~~~~E~~~l~~l~H~n 590 (766)
..|+++++.+++++|+.. +.||+|+||.||+|.. +++.||||++..... ..+.+.+|++++++++|||
T Consensus 13 ~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 91 (307)
T 2nru_A 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHEN 91 (307)
T ss_dssp EECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTT
T ss_pred CcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCC
Confidence 468999999999999887 8999999999999986 578999999865321 1567999999999999999
Q ss_pred cccceeEEEecCCcEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCC
Q 004248 591 LVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASS 670 (766)
Q Consensus 591 iv~l~~~~~~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~N 670 (766)
|+++++++.. ++..++||||+++|+|.+++..... ...++|..+..++.|++.||+|||+. +|+||||||+|
T Consensus 92 i~~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~----~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~N 163 (307)
T 2nru_A 92 LVELLGFSSD-GDDLCLVYVYMPNGSLLDRLSCLDG----TPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSAN 163 (307)
T ss_dssp BCCEEEEECS-SSSCEEEEECCTTCBHHHHHHTGGG----CCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGG
T ss_pred eEEEEEEEec-CCceEEEEEecCCCcHHHHHHhccC----CCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHH
Confidence 9999998765 5679999999999999999975321 13589999999999999999999998 99999999999
Q ss_pred eeeCCCCcEEeccchhhhhcCCC-----CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCC
Q 004248 671 ILLDDKFEVRLGSLSEVCAQGGD-----AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHL 745 (766)
Q Consensus 671 ILl~~~~~~kl~DFG~a~~~~~~-----~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p 745 (766)
|++++++.+||+|||+++..... .....+|..|+|||...+ . ++.++|||||||++|||+||+.|
T Consensus 164 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~---------~~~~~Dv~slG~il~~l~~g~~p 233 (307)
T 2nru_A 164 ILLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-E---------ITPKSDIYSFGVVLLEIITGLPA 233 (307)
T ss_dssp EEECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-E---------ECTHHHHHHHHHHHHHHHHCCCS
T ss_pred EEEcCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-C---------CCccchhHHHHHHHHHHHHCCCC
Confidence 99999999999999999765332 223467899999997642 1 47899999999999999999999
Q ss_pred CCCCc
Q 004248 746 NLSSR 750 (766)
Q Consensus 746 ~~~~~ 750 (766)
|....
T Consensus 234 ~~~~~ 238 (307)
T 2nru_A 234 VDEHR 238 (307)
T ss_dssp BCTTB
T ss_pred cccCc
Confidence 96543
No 76
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=3.4e-36 Score=332.15 Aligned_cols=198 Identities=19% Similarity=0.256 Sum_probs=159.3
Q ss_pred HhCCCCccceeecCCcceEEEEEE-cCCcEEEEEEeecccc---CHHHHHHHHHHHhhcC-CCCcccceeEEEecC-CcE
Q 004248 532 ATGDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV---KTEAYLLELDFFSKVS-HARLVPLLGHCMERE-NEK 605 (766)
Q Consensus 532 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~-~~~ 605 (766)
..++|+..+.||+|+||.||+|.. .+|+.||||++..... ..+++.+|+.++++++ |||||++++++...+ ...
T Consensus 7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~ 86 (388)
T 3oz6_A 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDV 86 (388)
T ss_dssp HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCE
T ss_pred ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEE
Confidence 457899999999999999999984 6799999999964322 2557889999999997 999999999876432 368
Q ss_pred EEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccch
Q 004248 606 FLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLS 685 (766)
Q Consensus 606 ~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG 685 (766)
|+|||||+ |+|.+++... .+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 87 ~lv~e~~~-~~L~~~~~~~--------~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG 154 (388)
T 3oz6_A 87 YLVFDYME-TDLHAVIRAN--------ILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFG 154 (388)
T ss_dssp EEEEECCS-EEHHHHHHHT--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCT
T ss_pred EEEecccC-cCHHHHHHcC--------CCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEecCCc
Confidence 99999998 6999998753 389999999999999999999998 99999999999999999999999999
Q ss_pred hhhhcCC------------------------CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc
Q 004248 686 EVCAQGG------------------------DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF 741 (766)
Q Consensus 686 ~a~~~~~------------------------~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt 741 (766)
+|+.... .....++|++|+|||.+..... ++.++||||+||++|||+|
T Consensus 155 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~--------~~~~~DiwSlG~il~ell~ 226 (388)
T 3oz6_A 155 LSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTK--------YTKGIDMWSLGCILGEILC 226 (388)
T ss_dssp TCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCC--------CCTHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCC--------CCChhhHHHHHHHHHHHHh
Confidence 9975421 1233578999999998764321 5789999999999999999
Q ss_pred CCCCCCCC
Q 004248 742 NNHLNLSS 749 (766)
Q Consensus 742 G~~p~~~~ 749 (766)
|+.||...
T Consensus 227 g~~pf~~~ 234 (388)
T 3oz6_A 227 GKPIFPGS 234 (388)
T ss_dssp SSCSCCCS
T ss_pred CCCCCCCC
Confidence 99999543
No 77
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=8e-37 Score=343.54 Aligned_cols=197 Identities=15% Similarity=0.142 Sum_probs=162.8
Q ss_pred hCCCCccceeecCCcceEEEEEE-cCCcEEEEEEeecccc----CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEE
Q 004248 533 TGDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV----KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFL 607 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~----~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~l 607 (766)
.++|+..++||+|+||.||+|+. .+|+.||||++..... ..+.+.+|++++++++|||||++++++.. ++..|+
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~-~~~~~l 225 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQT-HDRLCF 225 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEE-TTEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEee-CCEEEE
Confidence 35688999999999999999994 6799999999975422 24568899999999999999999998876 568999
Q ss_pred EEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhcc-CCCCCeEecCCCCCCeeeCCCCcEEeccchh
Q 004248 608 VYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHH-ECTLPFVHRDVQASSILLDDKFEVRLGSLSE 686 (766)
Q Consensus 608 V~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~ 686 (766)
|||||++|+|.+++.+.+ .+++..+..++.|++.||+|||+ . +||||||||+|||++.++.+||+|||+
T Consensus 226 v~e~~~~~~L~~~l~~~~-------~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~DFG~ 295 (446)
T 4ejn_A 226 VMEYANGGELFFHLSRER-------VFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGL 295 (446)
T ss_dssp EECCCSSCBHHHHHHHHS-------CCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECCCCC
T ss_pred EEeeCCCCcHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEccCCC
Confidence 999999999999997654 38999999999999999999997 6 899999999999999999999999999
Q ss_pred hhhcC---CCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 687 VCAQG---GDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 687 a~~~~---~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
|+... ......+||+.|+|||.+.... ++.++|||||||++|||+||+.||...
T Consensus 296 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---------~~~~~DiwslG~il~ell~g~~Pf~~~ 352 (446)
T 4ejn_A 296 CKEGIKDGATMKTFCGTPEYLAPEVLEDND---------YGRAVDWWGLGVVMYEMMCGRLPFYNQ 352 (446)
T ss_dssp CCTTCC-----CCSSSCGGGCCHHHHHTSC---------CCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ceeccCCCcccccccCCccccCHhhcCCCC---------CCCccchhhhHHHHHHHhhCCCCCCCC
Confidence 98642 2234567899999999876544 478999999999999999999999544
No 78
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=2.1e-36 Score=331.22 Aligned_cols=203 Identities=20% Similarity=0.272 Sum_probs=169.1
Q ss_pred CCCCccceeecCCcceEEEEEEc------CCcEEEEEEeeccccC--HHHHHHHHHHHhhcCCCCcccceeEEEecCCcE
Q 004248 534 GDFSDANLIKNGHSGDLFRGILE------GGIPVVIKRIDLQSVK--TEAYLLELDFFSKVSHARLVPLLGHCMERENEK 605 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~--~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 605 (766)
++|...+.||+|+||.||+|+.. +++.||||+++..... ..++.+|+.++++++|||||++++++.. ++..
T Consensus 71 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~-~~~~ 149 (367)
T 3l9p_A 71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQ-SLPR 149 (367)
T ss_dssp GGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSSC
T ss_pred hHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEec-CCCC
Confidence 46888999999999999999842 4678999999653322 4579999999999999999999998765 5678
Q ss_pred EEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCC---cEEec
Q 004248 606 FLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKF---EVRLG 682 (766)
Q Consensus 606 ~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~---~~kl~ 682 (766)
++|||||++|+|.+++...+........+++.+++.++.||++||+|||+. +|+||||||+|||++.++ .+||+
T Consensus 150 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kL~ 226 (367)
T 3l9p_A 150 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIG 226 (367)
T ss_dssp EEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCCceEEEC
Confidence 999999999999999986543323334699999999999999999999998 999999999999999555 59999
Q ss_pred cchhhhhcC-----CCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCCC
Q 004248 683 SLSEVCAQG-----GDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLSS 749 (766)
Q Consensus 683 DFG~a~~~~-----~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~~ 749 (766)
|||+++... .......+|..|+|||.+.... ++.++|||||||++|||+| |+.||...
T Consensus 227 DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~---------~~~~~DvwslG~il~ellt~g~~pf~~~ 290 (367)
T 3l9p_A 227 DFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGI---------FTSKTDTWSFGVLLWEIFSLGYMPYPSK 290 (367)
T ss_dssp CCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCC---------CCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred CCccccccccccccccCCCcCCcccEECHHHhcCCC---------CCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 999997541 2233456788999999875443 5789999999999999998 99998543
No 79
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=4.8e-36 Score=330.10 Aligned_cols=198 Identities=15% Similarity=0.188 Sum_probs=170.6
Q ss_pred hCCCCccceeecCCcceEEEEEE-cCCcEEEEEEeecccc-CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEe
Q 004248 533 TGDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV-KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYK 610 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~E 610 (766)
.++|+..+.||+|+||.||+|.. .+|+.||+|.+..... ....+.+|+++|++++|||||++++++.+ ++..++|||
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~-~~~~~lv~E 128 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFED-KYEMVLILE 128 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEEC-SSEEEEEEE
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEe-CCEEEEEEE
Confidence 35788999999999999999995 5789999999975433 25578999999999999999999997765 568999999
Q ss_pred eCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCC--CCcEEeccchhhh
Q 004248 611 YMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDD--KFEVRLGSLSEVC 688 (766)
Q Consensus 611 y~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~--~~~~kl~DFG~a~ 688 (766)
||++|+|.+++.... ..+++.++..++.||+.||+|||+. +|+||||||+|||++. ++.+||+|||+++
T Consensus 129 ~~~gg~L~~~l~~~~------~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG~a~ 199 (387)
T 1kob_A 129 FLSGGELFDRIAAED------YKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLAT 199 (387)
T ss_dssp CCCCCBHHHHTTCTT------CCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCE
T ss_pred cCCCCcHHHHHHhhc------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEecccce
Confidence 999999999997543 2489999999999999999999998 9999999999999984 5789999999998
Q ss_pred hcCCC--CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 689 AQGGD--AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 689 ~~~~~--~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
..... .....+|+.|+|||...... ++.++|||||||++|||+||+.||...
T Consensus 200 ~~~~~~~~~~~~gt~~y~aPE~~~~~~---------~~~~~DiwSlG~il~elltg~~Pf~~~ 253 (387)
T 1kob_A 200 KLNPDEIVKVTTATAEFAAPEIVDREP---------VGFYTDMWAIGVLGYVLLSGLSPFAGE 253 (387)
T ss_dssp ECCTTSCEEEECSSGGGCCHHHHTTCC---------BCHHHHHHHHHHHHHHHHHSCCSSCCS
T ss_pred ecCCCcceeeeccCCCccCchhccCCC---------CCCcccEeeHhHHHHHHHhCCCCCCCC
Confidence 76433 23456899999999876544 467999999999999999999999643
No 80
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=4.3e-36 Score=313.59 Aligned_cols=197 Identities=20% Similarity=0.288 Sum_probs=171.5
Q ss_pred CCCCccceeecCCcceEEEEEEcCCcEEEEEEeeccccCHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEeeCC
Q 004248 534 GDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMP 613 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey~~ 613 (766)
++|+..+.||+|+||.||+|...++..||||++.......+++.+|++++++++||||+++++++.. ++..++||||++
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~~ 86 (268)
T 3sxs_A 8 EEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSK-EYPIYIVTEYIS 86 (268)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTBCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSSEEEEEECCT
T ss_pred hheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCCcHHHHHHHHHHHHhCCCCCEeeEEEEEcc-CCceEEEEEccC
Confidence 5688899999999999999998888899999998776667889999999999999999999997755 567999999999
Q ss_pred CCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcCCC
Q 004248 614 NGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGD 693 (766)
Q Consensus 614 ~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~~~ 693 (766)
+|+|.+++.... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 87 ~~~L~~~l~~~~------~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~ 157 (268)
T 3sxs_A 87 NGCLLNYLRSHG------KGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDD 157 (268)
T ss_dssp TCBHHHHHHHHG------GGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCEEECCTT
T ss_pred CCcHHHHHHHcC------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCccceecchh
Confidence 999999997643 2489999999999999999999998 9999999999999999999999999999865332
Q ss_pred C----ccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCCC
Q 004248 694 A----HQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLSS 749 (766)
Q Consensus 694 ~----~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~~ 749 (766)
. ....+|..|+|||...... ++.++||||+||++|||+| |+.||...
T Consensus 158 ~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~Di~slG~il~~l~~~g~~p~~~~ 209 (268)
T 3sxs_A 158 QYVSSVGTKFPVKWSAPEVFHYFK---------YSSKSDVWAFGILMWEVFSLGKMPYDLY 209 (268)
T ss_dssp CEEECCSCCCCGGGCCHHHHHHSE---------EETTHHHHHHHHHHHHHHTTTCCTTTTS
T ss_pred hhhcccCCCcCcccCCHHHHhccC---------CchhhhhHHHHHHHHHHHcCCCCCcccc
Confidence 2 2234466799999875433 4789999999999999999 99998543
No 81
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=6.5e-36 Score=330.05 Aligned_cols=201 Identities=21% Similarity=0.210 Sum_probs=171.4
Q ss_pred CCCCccceeecC--CcceEEEEEE-cCCcEEEEEEeeccccC---HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEE
Q 004248 534 GDFSDANLIKNG--HSGDLFRGIL-EGGIPVVIKRIDLQSVK---TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFL 607 (766)
Q Consensus 534 ~~~~~~~~ig~G--~~g~Vy~~~~-~~g~~vavK~l~~~~~~---~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~l 607 (766)
++|+..++||+| +||.||+|+. .+|+.||||++...... .+.+.+|++++++++|||||++++++.+ ++..|+
T Consensus 25 ~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-~~~~~l 103 (389)
T 3gni_B 25 GCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIA-DNELWV 103 (389)
T ss_dssp GGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-TTEEEE
T ss_pred CcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEE-CCEEEE
Confidence 568899999999 9999999995 47999999999765433 4578889999999999999999998876 578999
Q ss_pred EEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhh
Q 004248 608 VYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEV 687 (766)
Q Consensus 608 V~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a 687 (766)
|||||++|+|.+++..... ..+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||.+
T Consensus 104 v~e~~~~~~L~~~l~~~~~-----~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~dfg~~ 175 (389)
T 3gni_B 104 VTSFMAYGSAKDLICTHFM-----DGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSN 175 (389)
T ss_dssp EEECCTTCBHHHHHHHTCT-----TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCGGGC
T ss_pred EEEccCCCCHHHHHhhhcc-----cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccccc
Confidence 9999999999999976532 2489999999999999999999998 9999999999999999999999999987
Q ss_pred hhcC----------CCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCCc
Q 004248 688 CAQG----------GDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSSR 750 (766)
Q Consensus 688 ~~~~----------~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~~ 750 (766)
.... .......+|..|+|||.+...... ++.++|||||||++|||+||+.||....
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-------~~~~~DiwslG~il~el~~g~~pf~~~~ 241 (389)
T 3gni_B 176 LSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQG-------YDAKSDIYSVGITACELANGHVPFKDMP 241 (389)
T ss_dssp EECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSC-------BCTHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred eeeccccccccccccccccccccccccCHHHHhccCCC-------CCcHhHHHHHHHHHHHHHHCCCCCCCCC
Confidence 5431 112234678899999987653222 5789999999999999999999996543
No 82
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=3.3e-36 Score=330.25 Aligned_cols=194 Identities=16% Similarity=0.215 Sum_probs=162.2
Q ss_pred CccceeecCCcceEEEEEE-cCCcEEEEEEeecccc-CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEeeCCC
Q 004248 537 SDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV-KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPN 614 (766)
Q Consensus 537 ~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey~~~ 614 (766)
...++||+|+||.||+|.. .+|+.||||+++.... ..+++.+|++++++++|||||++++++.. .+..++||||+++
T Consensus 92 ~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~-~~~~~lv~E~~~~ 170 (373)
T 2x4f_A 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFES-KNDIVLVMEYVDG 170 (373)
T ss_dssp EEEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEC-SSEEEEEEECCTT
T ss_pred ecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEE-CCEEEEEEeCCCC
Confidence 3457899999999999985 5799999999976543 35689999999999999999999998765 5689999999999
Q ss_pred CChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeee--CCCCcEEeccchhhhhcCC
Q 004248 615 GDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILL--DDKFEVRLGSLSEVCAQGG 692 (766)
Q Consensus 615 GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl--~~~~~~kl~DFG~a~~~~~ 692 (766)
|+|.+++.... ..+++.++..++.||++||+|||+. +|+||||||+|||+ +.++.+||+|||+++....
T Consensus 171 ~~L~~~l~~~~------~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~ 241 (373)
T 2x4f_A 171 GELFDRIIDES------YNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKP 241 (373)
T ss_dssp CEEHHHHHHTG------GGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCT
T ss_pred CcHHHHHHhcC------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCceecCC
Confidence 99999987543 2489999999999999999999998 99999999999999 6778999999999987643
Q ss_pred C--CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 693 D--AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 693 ~--~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
. .....+|+.|+|||.+.... ++.++|||||||++|||+||+.||...
T Consensus 242 ~~~~~~~~gt~~y~aPE~~~~~~---------~~~~~DiwslG~il~elltg~~pf~~~ 291 (373)
T 2x4f_A 242 REKLKVNFGTPEFLAPEVVNYDF---------VSFPTDMWSVGVIAYMLLSGLSPFLGD 291 (373)
T ss_dssp TCBCCCCCSSCTTCCHHHHTTCB---------CCHHHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred ccccccccCCCcEeChhhccCCC---------CCcHHhHHHHHHHHHHHHhCCCCCCCC
Confidence 2 33456899999999875443 478999999999999999999999543
No 83
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=3.1e-36 Score=327.55 Aligned_cols=197 Identities=14% Similarity=0.146 Sum_probs=155.9
Q ss_pred hCCCCccceeecCCcceEEEEEEc-CCcEEEEEEeeccccCHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEee
Q 004248 533 TGDFSDANLIKNGHSGDLFRGILE-GGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKY 611 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey 611 (766)
.++|+..+.||+|+||.||+|+.. +++.||||++.... ..+.+.+|++++++++|||||++++++.. .+..++||||
T Consensus 52 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~-~~~~~lv~e~ 129 (349)
T 2w4o_A 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV-DKKIVRTEIGVLLRLSHPNIIKLKEIFET-PTEISLVLEL 129 (349)
T ss_dssp GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC-----------CHHHHHCCCTTBCCEEEEEEC-SSEEEEEECC
T ss_pred cCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch-hHHHHHHHHHHHHhCCCCCCcceeeeEec-CCeEEEEEEe
Confidence 457888999999999999999964 68899999997543 34678899999999999999999998865 5689999999
Q ss_pred CCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCC---CCcEEeccchhhh
Q 004248 612 MPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDD---KFEVRLGSLSEVC 688 (766)
Q Consensus 612 ~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~---~~~~kl~DFG~a~ 688 (766)
+++|+|.+++...+ .+++.++..++.|++.||+|||+. +|+||||||+|||++. ++.+||+|||+++
T Consensus 130 ~~~~~L~~~l~~~~-------~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~ 199 (349)
T 2w4o_A 130 VTGGELFDRIVEKG-------YYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSK 199 (349)
T ss_dssp CCSCBHHHHHTTCS-------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCCC---
T ss_pred CCCCCHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccCcccc
Confidence 99999999997543 389999999999999999999998 9999999999999975 8999999999998
Q ss_pred hcCCC--CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCCc
Q 004248 689 AQGGD--AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSSR 750 (766)
Q Consensus 689 ~~~~~--~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~~ 750 (766)
..... .....+|+.|+|||...... ++.++|||||||++|||+||+.||....
T Consensus 200 ~~~~~~~~~~~~gt~~y~aPE~~~~~~---------~~~~~DiwslG~il~ell~g~~pf~~~~ 254 (349)
T 2w4o_A 200 IVEHQVLMKTVCGTPGYCAPEILRGCA---------YGPEVDMWSVGIITYILLCGFEPFYDER 254 (349)
T ss_dssp -------------CGGGSCHHHHTTCC---------CCTHHHHHHHHHHHHHHHHSSCTTCCTT
T ss_pred ccCcccccccccCCCCccCHHHhcCCC---------CCcccchHHHHHHHHHHHhCCCCCCCCc
Confidence 76332 34457899999999876543 4789999999999999999999996443
No 84
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=3e-36 Score=340.11 Aligned_cols=190 Identities=16% Similarity=0.210 Sum_probs=150.7
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC---HHHHHHHHHHHhhcCCCCcccceeEEEec----CCcE
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK---TEAYLLELDFFSKVSHARLVPLLGHCMER----ENEK 605 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~---~~~~~~E~~~l~~l~H~niv~l~~~~~~~----~~~~ 605 (766)
++|+..++||+|+||.||+|+. .+|+.||||++...... .+++.+|+++|++++|||||++++++... .+..
T Consensus 53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 132 (458)
T 3rp9_A 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDEL 132 (458)
T ss_dssp TTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceE
Confidence 6789999999999999999984 57899999999653322 46799999999999999999999987532 2468
Q ss_pred EEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccch
Q 004248 606 FLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLS 685 (766)
Q Consensus 606 ~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG 685 (766)
|+||||+. |+|.+++.... .+++..+..++.||+.||+|||+. +||||||||+|||++.++++||+|||
T Consensus 133 ~lv~e~~~-~~L~~~~~~~~-------~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFG 201 (458)
T 3rp9_A 133 YVVLEIAD-SDFKKLFRTPV-------YLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFG 201 (458)
T ss_dssp EEEECCCS-EEHHHHHHSSC-------CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCT
T ss_pred EEEEeccc-cchhhhcccCC-------CCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeecccc
Confidence 99999985 79999997543 399999999999999999999998 99999999999999999999999999
Q ss_pred hhhhcCC------------------------------CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHH
Q 004248 686 EVCAQGG------------------------------DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNP 735 (766)
Q Consensus 686 ~a~~~~~------------------------------~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvv 735 (766)
+|+.... .....+||++|+|||.+..... ++.++|||||||+
T Consensus 202 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~--------~~~~~DiwSlG~i 273 (458)
T 3rp9_A 202 LARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQEN--------YTEAIDVWSIGCI 273 (458)
T ss_dssp TCBCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCC--------CCTHHHHHHHHHH
T ss_pred cchhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCC--------CCcHhHHHHHHHH
Confidence 9986531 1234577999999997643321 5789999999999
Q ss_pred HHHHhcC
Q 004248 736 LFSAIFN 742 (766)
Q Consensus 736 l~elltG 742 (766)
+|||+||
T Consensus 274 l~elltg 280 (458)
T 3rp9_A 274 FAELLNM 280 (458)
T ss_dssp HHHHHTT
T ss_pred HHHHHHh
Confidence 9999994
No 85
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=4.1e-36 Score=336.20 Aligned_cols=195 Identities=15% Similarity=0.213 Sum_probs=163.8
Q ss_pred hCCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC---HHHHHHHHHHHhhcCCCCcccceeEEEecC----Cc
Q 004248 533 TGDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK---TEAYLLELDFFSKVSHARLVPLLGHCMERE----NE 604 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~---~~~~~~E~~~l~~l~H~niv~l~~~~~~~~----~~ 604 (766)
.++|...+.||+|+||.||+|+. .+|+.||||++...... .+++.+|++++++++|||||++++++.... +.
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 36799999999999999999995 56899999999754322 467999999999999999999999876532 46
Q ss_pred EEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccc
Q 004248 605 KFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684 (766)
Q Consensus 605 ~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DF 684 (766)
.|+||||++ |+|.+++.... .+++..+..++.||++||+|||+. +|+||||||+|||++.++.+||+||
T Consensus 105 ~~lv~e~~~-~~L~~~~~~~~-------~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DF 173 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFKTPI-------FLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDF 173 (432)
T ss_dssp EEEEEECCS-EEHHHHHHSSC-------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCC
T ss_pred EEEEEecCC-cCHHHHHhccC-------CCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccC
Confidence 899999997 59999997543 389999999999999999999998 9999999999999999999999999
Q ss_pred hhhhhcCCC-------------------------CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHH
Q 004248 685 SEVCAQGGD-------------------------AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSA 739 (766)
Q Consensus 685 G~a~~~~~~-------------------------~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~el 739 (766)
|+|+..... ....++|++|+|||.+..... ++.++||||+||++|||
T Consensus 174 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~--------~~~~~DiwSlG~il~el 245 (432)
T 3n9x_A 174 GLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQEN--------YTKSIDIWSTGCIFAEL 245 (432)
T ss_dssp TTCEEC-------------------------------CCCCCTTCCHHHHTTCSC--------CCTHHHHHHHHHHHHHH
T ss_pred CCcccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCC--------CCcccccchHHHHHHHH
Confidence 999865321 245678999999997643322 57899999999999999
Q ss_pred hcCCCCC
Q 004248 740 IFNNHLN 746 (766)
Q Consensus 740 ltG~~p~ 746 (766)
+||..||
T Consensus 246 l~g~~p~ 252 (432)
T 3n9x_A 246 LNMLQSH 252 (432)
T ss_dssp HTTCTTT
T ss_pred Hhccccc
Confidence 9865554
No 86
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=5.7e-36 Score=333.65 Aligned_cols=200 Identities=14% Similarity=0.174 Sum_probs=162.5
Q ss_pred HhCCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC---------HHHHHHHHHHHhhcCCCCcccceeEEEec
Q 004248 532 ATGDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK---------TEAYLLELDFFSKVSHARLVPLLGHCMER 601 (766)
Q Consensus 532 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~---------~~~~~~E~~~l~~l~H~niv~l~~~~~~~ 601 (766)
..++|...+.||+|+||.||+|.. .+++.||||++...... ...+.+|+++|++++|||||++++++.
T Consensus 133 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~-- 210 (419)
T 3i6u_A 133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-- 210 (419)
T ss_dssp HHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE--
T ss_pred hhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe--
Confidence 457899999999999999999985 56899999999754321 225889999999999999999999764
Q ss_pred CCcEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCC---Cc
Q 004248 602 ENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDK---FE 678 (766)
Q Consensus 602 ~~~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~---~~ 678 (766)
.+..|+|||||++|+|.+++...+ .+++.++..++.|++.||+|||+. +|+||||||+|||++.+ +.
T Consensus 211 ~~~~~lv~e~~~~g~L~~~l~~~~-------~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~~~ 280 (419)
T 3i6u_A 211 AEDYYIVLELMEGGELFDKVVGNK-------RLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCL 280 (419)
T ss_dssp SSEEEEEEECCTTCBGGGGTSSSC-------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSSSCC
T ss_pred cCceEEEEEcCCCCcHHHHHhccC-------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCCcce
Confidence 356899999999999999987543 389999999999999999999998 99999999999999754 45
Q ss_pred EEeccchhhhhcCCC--CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 679 VRLGSLSEVCAQGGD--AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 679 ~kl~DFG~a~~~~~~--~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
+||+|||+++..+.. .....||+.|+|||.+.....+. ++.++|||||||++|||+||+.||...
T Consensus 281 ~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~------~~~~~DiwslG~il~~lltg~~pf~~~ 347 (419)
T 3i6u_A 281 IKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAG------YNRAVDCWSLGVILFICLSGYPPFSEH 347 (419)
T ss_dssp EEECCSSTTTSCC-----------CTTCCTTTTC----CT------THHHHHHHHHHHHHHHHHHSSCSSCCC
T ss_pred EEEeecccceecCCCccccccCCCCCccCceeeecCCCCC------CCchhhhHhHHHHHHHHHHCCCCCCCC
Confidence 999999999876433 34567899999999875422111 578999999999999999999999643
No 87
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=2.6e-36 Score=340.04 Aligned_cols=198 Identities=16% Similarity=0.289 Sum_probs=171.8
Q ss_pred HhCCCCccceeecCCcceEEEEEEcCCcEEEEEEeeccccCHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEee
Q 004248 532 ATGDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKY 611 (766)
Q Consensus 532 ~~~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey 611 (766)
..++|+..+.||+|+||.||+|...++..||||+++......++|.+|+++|++++|||||++++++. ++..|+||||
T Consensus 186 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~--~~~~~lv~e~ 263 (454)
T 1qcf_A 186 PRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT--KEPIYIITEF 263 (454)
T ss_dssp CGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHTTCCCTTBCCEEEEEC--SSSCEEEECC
T ss_pred chHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCCccHHHHHHHHHHHhhCCCCCEeeEEEEEe--CCccEEEEee
Confidence 34568888999999999999999988899999999876666789999999999999999999999775 4578999999
Q ss_pred CCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcC
Q 004248 612 MPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQG 691 (766)
Q Consensus 612 ~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~ 691 (766)
|++|+|.++++.... ..+++.++..++.||+.||+|||++ +||||||||+|||++.++.+||+|||+++...
T Consensus 264 ~~~g~L~~~l~~~~~-----~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~ 335 (454)
T 1qcf_A 264 MAKGSLLDFLKSDEG-----SKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIE 335 (454)
T ss_dssp CTTCBHHHHHHSHHH-----HTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTGGGGBC
T ss_pred cCCCcHHHHHHhccC-----CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCCceEcC
Confidence 999999999975421 2488999999999999999999998 99999999999999999999999999998763
Q ss_pred CC----CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCC
Q 004248 692 GD----AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLS 748 (766)
Q Consensus 692 ~~----~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~ 748 (766)
.. .....++..|+|||.+.... ++.++|||||||++|||+| |+.||..
T Consensus 336 ~~~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~DvwslG~~l~el~t~g~~P~~~ 388 (454)
T 1qcf_A 336 DNEYTAREGAKFPIKWTAPEAINFGS---------FTIKSDVWSFGILLMEIVTYGRIPYPG 388 (454)
T ss_dssp CHHHHTTCSSSSCGGGSCHHHHHHCC---------CCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred CCceeccCCCcccccccCHHHhccCC---------CCcHHHHHhHHHHHHHHHhCCCCCCCC
Confidence 22 12234567899999875433 5789999999999999999 9999954
No 88
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=3e-36 Score=330.68 Aligned_cols=197 Identities=20% Similarity=0.333 Sum_probs=157.9
Q ss_pred CCCCccceeecCCcceEEEEEEc----CCcEEEEEEeecccc--CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGILE----GGIPVVIKRIDLQSV--KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFL 607 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~~----~g~~vavK~l~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~l 607 (766)
++|+..+.||+|+||.||+|+.. ++..||||+++.... ..++|.+|++++++++|||||++++++.+ ++..++
T Consensus 45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-~~~~~l 123 (373)
T 2qol_A 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK-SKPVMI 123 (373)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSSCEE
T ss_pred hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEee-CCceEE
Confidence 46888999999999999999854 577899999975432 25679999999999999999999998765 567999
Q ss_pred EEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhh
Q 004248 608 VYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEV 687 (766)
Q Consensus 608 V~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a 687 (766)
||||+++|+|.+++++.. ..+++.++..++.||++||+|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 124 v~e~~~~~sL~~~l~~~~------~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 194 (373)
T 2qol_A 124 VTEYMENGSLDSFLRKHD------AQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLG 194 (373)
T ss_dssp EEECCTTCBHHHHHHTTT------TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC---
T ss_pred EEeCCCCCcHHHHHHhCC------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcCccc
Confidence 999999999999997543 2489999999999999999999998 9999999999999999999999999999
Q ss_pred hhcCCCC------ccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCCC
Q 004248 688 CAQGGDA------HQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLSS 749 (766)
Q Consensus 688 ~~~~~~~------~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~~ 749 (766)
+...... ....++..|+|||...... ++.++|||||||++|||++ |+.||...
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~Dv~SlG~il~ellt~g~~P~~~~ 254 (373)
T 2qol_A 195 RVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK---------FTSASDVWSYGIVLWEVMSYGERPYWEM 254 (373)
T ss_dssp -------------------CTTSCHHHHHHCC---------CCHHHHHHHHHHHHHHHHTTC-CTTTTC
T ss_pred cccccCCccceeccCCCcCCCccChhhhccCC---------cCchhcHHHHHHHHHHHHhCCCCCCCCC
Confidence 8763321 1123456799999875443 5789999999999999998 99999543
No 89
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=5.5e-36 Score=337.72 Aligned_cols=195 Identities=17% Similarity=0.195 Sum_probs=161.8
Q ss_pred hCCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC---HHHHHHHHHHHhhcCCCCcccceeEEEecC-----C
Q 004248 533 TGDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK---TEAYLLELDFFSKVSHARLVPLLGHCMERE-----N 603 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~---~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-----~ 603 (766)
.++|+..+.||+|+||.||+|+. .+|+.||||++...... .+++.+|++++++++|||||++++++.... .
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 46799999999999999999984 57899999999754322 567899999999999999999999875422 3
Q ss_pred cEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEecc
Q 004248 604 EKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGS 683 (766)
Q Consensus 604 ~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~D 683 (766)
..|+|||||++ +|.+.+.. .+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+|
T Consensus 141 ~~~lv~E~~~~-~l~~~~~~---------~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~D 207 (464)
T 3ttj_A 141 DVYLVMELMDA-NLCQVIQM---------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILD 207 (464)
T ss_dssp EEEEEEECCSE-EHHHHHTS---------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECC
T ss_pred eEEEEEeCCCC-CHHHHHhh---------cCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEE
Confidence 57999999986 57776642 289999999999999999999998 999999999999999999999999
Q ss_pred chhhhhcCC--CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 684 LSEVCAQGG--DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 684 FG~a~~~~~--~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
||+|+..+. .....++|+.|+|||.+.+.. ++.++||||+||++|||++|+.||...
T Consensus 208 FG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~---------~~~~~DiwSlG~il~ell~g~~pF~g~ 266 (464)
T 3ttj_A 208 FGLARTAGTSFMMTPYVVTRYYRAPEVILGMG---------YKENVDIWSVGCIMGEMVRHKILFPGR 266 (464)
T ss_dssp CCCC-----CCCC----CCCTTCCHHHHTTCC---------CCTTHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred EEeeeecCCCcccCCCcccccccCHHHHcCCC---------CCHHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 999987643 245568999999999886543 478999999999999999999999543
No 90
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=1.1e-35 Score=317.35 Aligned_cols=200 Identities=20% Similarity=0.239 Sum_probs=167.6
Q ss_pred HhCCCCccceeecCCcceEEEEEE-cCCcEEEEEEeecccc------CHHHHHHHHHHHhhcC---CCCcccceeEEEec
Q 004248 532 ATGDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV------KTEAYLLELDFFSKVS---HARLVPLLGHCMER 601 (766)
Q Consensus 532 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~------~~~~~~~E~~~l~~l~---H~niv~l~~~~~~~ 601 (766)
..++|+..+.||+|+||.||+|+. .+|+.||||++..... ....+.+|++++++++ ||||++++++|...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 356899999999999999999994 6799999999964321 1356788888887775 99999999988763
Q ss_pred CC----cEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCC
Q 004248 602 EN----EKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKF 677 (766)
Q Consensus 602 ~~----~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~ 677 (766)
.. ..++||||++ |+|.+++..... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~-----~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~ 157 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAPP-----PGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGG 157 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCCT-----TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTS
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhccC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCC
Confidence 32 4799999998 599999976543 3489999999999999999999998 899999999999999999
Q ss_pred cEEeccchhhhhcCC--CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 678 EVRLGSLSEVCAQGG--DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 678 ~~kl~DFG~a~~~~~--~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
.+||+|||+++.... ......+|+.|+|||.+.... ++.++|||||||++|||+||+.||...
T Consensus 158 ~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~---------~~~~~DiwslG~il~~l~~g~~pf~~~ 222 (308)
T 3g33_A 158 TVKLADFGLARIYSYQMALTPVVVTLWYRAPEVLLQST---------YATPVDMWSVGCIFAEMFRRKPLFCGN 222 (308)
T ss_dssp CEEECSCSCTTTSTTCCCSGGGGCCCSSCCHHHHHTSC---------CCSTHHHHHHHHHHHHTTTSSCSCCCS
T ss_pred CEEEeeCccccccCCCcccCCccccccccCchHHcCCC---------CCchHHHHHHHHHHHHHHhCCCCCCCC
Confidence 999999999987642 334567899999999876544 478999999999999999999999543
No 91
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=4.2e-36 Score=318.94 Aligned_cols=200 Identities=19% Similarity=0.308 Sum_probs=164.0
Q ss_pred hCCCCccceeecCCcceEEEEEEcCCcEEEEEEeeccccCHHHHHHHHHHHhh--cCCCCcccceeEEEec---CCcEEE
Q 004248 533 TGDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSK--VSHARLVPLLGHCMER---ENEKFL 607 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~E~~~l~~--l~H~niv~l~~~~~~~---~~~~~l 607 (766)
.++|+..+.||+|+||.||+|+. +|+.||||++... ..+.+.+|.+++.. ++||||+++++++... ....++
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~--~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~l 83 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR--DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWL 83 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG--GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc--cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEE
Confidence 35788999999999999999987 6889999998654 34566777777776 7999999999987542 235899
Q ss_pred EEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhc--------cCCCCCeEecCCCCCCeeeCCCCcE
Q 004248 608 VYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLH--------HECTLPFVHRDVQASSILLDDKFEV 679 (766)
Q Consensus 608 V~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH--------~~~~~~iiHrDlKp~NILl~~~~~~ 679 (766)
||||+++|+|.++++.. .+++..+..++.|++.||+||| +. +|+||||||+|||++.++.+
T Consensus 84 v~e~~~~g~L~~~l~~~--------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill~~~~~~ 152 (301)
T 3q4u_A 84 ITHYHEMGSLYDYLQLT--------TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILVKKNGQC 152 (301)
T ss_dssp EECCCTTCBHHHHHTTC--------CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEECTTSCE
T ss_pred ehhhccCCCHHHHHhhc--------ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEEcCCCCE
Confidence 99999999999999532 3899999999999999999999 65 99999999999999999999
Q ss_pred EeccchhhhhcCCC-------CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcC----------
Q 004248 680 RLGSLSEVCAQGGD-------AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFN---------- 742 (766)
Q Consensus 680 kl~DFG~a~~~~~~-------~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG---------- 742 (766)
||+|||+++..... .....+|+.|+|||......... ...+++++|||||||++|||+||
T Consensus 153 kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~---~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~ 229 (301)
T 3q4u_A 153 CIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVD---CFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDY 229 (301)
T ss_dssp EECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTT---CHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCC
T ss_pred EEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCC---cccCCchhhHHHHHHHHHHHHhhhcCccccccc
Confidence 99999999765322 12337899999999876542110 00156899999999999999999
Q ss_pred CCCCCCC
Q 004248 743 NHLNLSS 749 (766)
Q Consensus 743 ~~p~~~~ 749 (766)
+.||...
T Consensus 230 ~~pf~~~ 236 (301)
T 3q4u_A 230 KPPFYDV 236 (301)
T ss_dssp CCTTTTT
T ss_pred ccccccc
Confidence 8888543
No 92
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=4.6e-36 Score=322.99 Aligned_cols=197 Identities=19% Similarity=0.342 Sum_probs=164.8
Q ss_pred CCCCccceeecCCcceEEEEEEc----CCcEEEEEEeeccccC--HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGILE----GGIPVVIKRIDLQSVK--TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFL 607 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~~----~g~~vavK~l~~~~~~--~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~l 607 (766)
++|...+.||+|+||.||+|... .+..||||+++..... .++|.+|++++++++|||||++++++.+ ++..|+
T Consensus 49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~l 127 (325)
T 3kul_A 49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTR-GRLAMI 127 (325)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECG-GGCCEE
T ss_pred hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEe-CCccEE
Confidence 45778899999999999999963 3456999999754322 5679999999999999999999998765 567899
Q ss_pred EEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhh
Q 004248 608 VYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEV 687 (766)
Q Consensus 608 V~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a 687 (766)
||||+++|+|.++++.... .+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 128 v~e~~~~~~L~~~l~~~~~------~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 198 (325)
T 3kul_A 128 VTEYMENGSLDTFLRTHDG------QFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLS 198 (325)
T ss_dssp EEECCTTCBHHHHHHTTTT------CSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCSSC
T ss_pred EeeCCCCCcHHHHHHhccc------CCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECCCCcc
Confidence 9999999999999975432 489999999999999999999998 9999999999999999999999999999
Q ss_pred hhcCCCC------ccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCCC
Q 004248 688 CAQGGDA------HQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLSS 749 (766)
Q Consensus 688 ~~~~~~~------~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~~ 749 (766)
+...... ....+|..|+|||...... ++.++|||||||++|||++ |+.||...
T Consensus 199 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~---------~~~~~Di~slG~il~ell~~g~~p~~~~ 258 (325)
T 3kul_A 199 RVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRT---------FSSASDVWSFGVVMWEVLAYGERPYWNM 258 (325)
T ss_dssp EECC----CCEECC---CCGGGSCHHHHHHCE---------ECHHHHHHHHHHHHHHHHTTSCCTTTTS
T ss_pred cccccCccceeeccCCCCcccccCHhHhcCCC---------CCcHHHHHHHHHHHHHHHcCCCCCcccC
Confidence 8763321 1223466799999875433 5789999999999999999 99999543
No 93
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=1.4e-36 Score=324.77 Aligned_cols=199 Identities=13% Similarity=0.171 Sum_probs=164.4
Q ss_pred hCCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC----HHHHHHHHHHHhhcCCCCcccceeEEEecCC---c
Q 004248 533 TGDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK----TEAYLLELDFFSKVSHARLVPLLGHCMEREN---E 604 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~----~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~---~ 604 (766)
.++|+..+.||+|+||.||+|+. .+++.||||++...... .+++.+|++++++++|||||++++++..... .
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 35788999999999999999994 67999999999764332 3578999999999999999999998765322 2
Q ss_pred EEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccc
Q 004248 605 KFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684 (766)
Q Consensus 605 ~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DF 684 (766)
.|+||||+++|+|.++++..+ .+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 91 ~~lv~e~~~g~~L~~~l~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Df 160 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHTEG-------PMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDF 160 (311)
T ss_dssp EEEEEECCCEEEHHHHHHHHC-------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCC
T ss_pred cEEEEecCCCCCHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeec
Confidence 499999999999999997653 389999999999999999999998 9999999999999999999999999
Q ss_pred hhhhhcCCC------CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCCc
Q 004248 685 SEVCAQGGD------AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSSR 750 (766)
Q Consensus 685 G~a~~~~~~------~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~~ 750 (766)
|+++..... .....||..|+|||...... ++.++|||||||++|||+||+.||....
T Consensus 161 g~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---------~~~~~Di~slG~~l~~ll~g~~pf~~~~ 223 (311)
T 3ork_A 161 GIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDS---------VDARSDVYSLGCVLYEVLTGEPPFTGDS 223 (311)
T ss_dssp SCC------------------CCTTCCHHHHHTCC---------CCHHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred cCcccccccccccccccccCcCcccCCHHHhcCCC---------CCchHhHHHHHHHHHHHHhCCCCCCCCC
Confidence 999765322 22345799999999876543 4789999999999999999999996443
No 94
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=4.9e-36 Score=315.73 Aligned_cols=198 Identities=21% Similarity=0.288 Sum_probs=169.7
Q ss_pred hCCCCccceeecCCcceEEEEEEcCCcEEEEEEeeccccCHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEeeC
Q 004248 533 TGDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYM 612 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey~ 612 (766)
.++|+..+.||+|+||.||+|...++..||||++.......+++.+|++++++++||||+++++++.+ ++..++||||+
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~ 101 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK-QRPIFIITEYM 101 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECS-SSSEEEEECCC
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCCHHHHHHHHHHHhcCCCCCEeeEEEEEec-CCCeEEEEecc
Confidence 35688899999999999999999889999999998776667889999999999999999999997765 56799999999
Q ss_pred CCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcCC
Q 004248 613 PNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGG 692 (766)
Q Consensus 613 ~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~~ 692 (766)
++|+|.+++.... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 102 ~~~~L~~~l~~~~------~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~ 172 (283)
T 3gen_A 102 ANGCLLNYLREMR------HRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD 172 (283)
T ss_dssp TTCBHHHHHHCGG------GCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTGGGGBCC
T ss_pred CCCcHHHHHHHhc------cCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEccccccccccc
Confidence 9999999997533 2489999999999999999999998 999999999999999999999999999986532
Q ss_pred C----CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCCC
Q 004248 693 D----AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLSS 749 (766)
Q Consensus 693 ~----~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~~ 749 (766)
. .....+|..|+|||...... ++.++||||+||++|||+| |+.||...
T Consensus 173 ~~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~Dv~slG~~l~~l~t~g~~p~~~~ 225 (283)
T 3gen_A 173 DEYTSSVGSKFPVRWSPPEVLMYSK---------FSSKSDIWAFGVLMWEIYSLGKMPYERF 225 (283)
T ss_dssp HHHHSTTSTTSCGGGCCHHHHHHCC---------CSHHHHHHHHHHHHHHHHTTTCCTTTTS
T ss_pred cccccccCCccCcccCCHHHhccCC---------CCchhhHHHHHHHHHHHHhCCCCCcccc
Confidence 1 22334567899999875443 4789999999999999999 99999543
No 95
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=1.8e-36 Score=330.46 Aligned_cols=215 Identities=17% Similarity=0.212 Sum_probs=176.0
Q ss_pred ccHHHHHHHhCCCCccceeecCCcceEEEEEE------cCCcEEEEEEeeccccC--HHHHHHHHHHHhhc-CCCCcccc
Q 004248 524 FTYQQLLAATGDFSDANLIKNGHSGDLFRGIL------EGGIPVVIKRIDLQSVK--TEAYLLELDFFSKV-SHARLVPL 594 (766)
Q Consensus 524 ~~~~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~------~~g~~vavK~l~~~~~~--~~~~~~E~~~l~~l-~H~niv~l 594 (766)
+...++....++|+..+.||+|+||.||+|+. .+++.||||+++..... .+.+.+|+++++++ +|||||++
T Consensus 12 ~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~ 91 (359)
T 3vhe_A 12 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 91 (359)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeee
Confidence 44555556678899999999999999999973 34689999999754332 45799999999999 79999999
Q ss_pred eeEEEecCCcEEEEEeeCCCCChhhhhhccCCCC----------------------------------------------
Q 004248 595 LGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTE---------------------------------------------- 628 (766)
Q Consensus 595 ~~~~~~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~---------------------------------------------- 628 (766)
+++|.+.+...++|||||++|+|.++++......
T Consensus 92 ~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (359)
T 3vhe_A 92 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEK 171 (359)
T ss_dssp EEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC------------------------------------------
T ss_pred eeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccccccccc
Confidence 9988765556899999999999999997643210
Q ss_pred -------------CcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcCCC--
Q 004248 629 -------------DDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGD-- 693 (766)
Q Consensus 629 -------------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~~~-- 693 (766)
.....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 172 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 248 (359)
T 3vhe_A 172 SLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 248 (359)
T ss_dssp ------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTT
T ss_pred ccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeeccccc
Confidence 0012289999999999999999999998 9999999999999999999999999999865322
Q ss_pred ---CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCCCc
Q 004248 694 ---AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLSSR 750 (766)
Q Consensus 694 ---~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~~~ 750 (766)
.....+|..|+|||...... ++.++|||||||++|||+| |+.||....
T Consensus 249 ~~~~~~~~~t~~y~aPE~~~~~~---------~~~~~Di~slG~il~ellt~g~~p~~~~~ 300 (359)
T 3vhe_A 249 YVRKGDARLPLKWMAPETIFDRV---------YTIQSDVWSFGVLLWEIFSLGASPYPGVK 300 (359)
T ss_dssp CEEC--CEECGGGCCHHHHHHCC---------CCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred chhccccCCCceeEChhhhcCCC---------CCchhhhhhHHHHHHHHHhcCCCCCCccc
Confidence 22346788899999875433 5789999999999999999 999996443
No 96
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=1.5e-35 Score=312.65 Aligned_cols=198 Identities=19% Similarity=0.279 Sum_probs=169.1
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC--------HHHHHHHHHHHhhcCCCCcccceeEEEecCCc
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK--------TEAYLLELDFFSKVSHARLVPLLGHCMERENE 604 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~--------~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 604 (766)
++|+..+.||+|+||.||+|+. .+++.||||++...... .+++.+|++++++++||||+++++++.+ .
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---~ 95 (287)
T 4f0f_A 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHN---P 95 (287)
T ss_dssp TTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETT---T
T ss_pred ccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecC---C
Confidence 5688899999999999999995 57899999998653322 1679999999999999999999997643 3
Q ss_pred EEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCC--eEecCCCCCCeeeCCCCc----
Q 004248 605 KFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLP--FVHRDVQASSILLDDKFE---- 678 (766)
Q Consensus 605 ~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~--iiHrDlKp~NILl~~~~~---- 678 (766)
.++||||+++|+|.+++.+.. ..+++..+..++.|++.||+|||+. + |+||||||+||+++.++.
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~~~~~ 166 (287)
T 4f0f_A 96 PRMVMEFVPCGDLYHRLLDKA------HPIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDENAPV 166 (287)
T ss_dssp TEEEEECCTTCBHHHHHHCTT------SCCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCTTCSC
T ss_pred CeEEEEecCCCCHHHHHhccc------CCccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCCCCce
Confidence 489999999999999887543 2489999999999999999999997 6 999999999999988876
Q ss_pred -EEeccchhhhhcCCCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCCc
Q 004248 679 -VRLGSLSEVCAQGGDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSSR 750 (766)
Q Consensus 679 -~kl~DFG~a~~~~~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~~ 750 (766)
+||+|||+++..........+|..|+|||.+...... ++.++||||+||++|||+||+.||....
T Consensus 167 ~~kl~Dfg~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~-------~~~~~Di~slG~~l~~l~~g~~pf~~~~ 232 (287)
T 4f0f_A 167 CAKVADFGLSQQSVHSVSGLLGNFQWMAPETIGAEEES-------YTEKADTYSFAMILYTILTGEGPFDEYS 232 (287)
T ss_dssp CEEECCCTTCBCCSSCEECCCCCCTTSCGGGSSCSSCE-------ECHHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred eEEeCCCCccccccccccccCCCccccCchhhccCCCC-------cCchhhHHHHHHHHHHHHcCCCCCcccc
Confidence 9999999998766555666789999999987433221 5789999999999999999999996543
No 97
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=5.5e-36 Score=322.99 Aligned_cols=195 Identities=15% Similarity=0.074 Sum_probs=168.3
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccCHHHHHHHHHHHhhc-CCCCcccceeEEEecCCcEEEEEee
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVKTEAYLLELDFFSKV-SHARLVPLLGHCMERENEKFLVYKY 611 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~~lV~Ey 611 (766)
++|+..+.||+|+||.||+|+. .+|+.||||.+..... .+++.+|+++++++ +||||+++++++.. ++..++||||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~E~~~l~~l~~h~~i~~~~~~~~~-~~~~~lv~e~ 86 (330)
T 2izr_A 9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR-APQLHLEYRFYKQLGSGDGIPQVYYFGPC-GKYNAMVLEL 86 (330)
T ss_dssp TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS-SCCHHHHHHHHHHHCSCTTSCCEEEEEEE-TTEEEEEEEC
T ss_pred CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc-hHHHHHHHHHHHHhhCCCCCCEEEEEEec-CCccEEEEEe
Confidence 5788899999999999999994 6799999999875432 34688999999999 99999999997766 5688999999
Q ss_pred CCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCc-----EEeccchh
Q 004248 612 MPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFE-----VRLGSLSE 686 (766)
Q Consensus 612 ~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~-----~kl~DFG~ 686 (766)
+ +|+|.+++.... ..+++.++..++.|++.||+|||+. +|+||||||+|||++.++. +||+|||+
T Consensus 87 ~-~~~L~~~~~~~~------~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~ 156 (330)
T 2izr_A 87 L-GPSLEDLFDLCD------RTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHIIDFAL 156 (330)
T ss_dssp C-CCBHHHHHHHTT------TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEECCCTT
T ss_pred C-CCCHHHHHHHcC------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEEEccc
Confidence 9 899999997642 2499999999999999999999998 9999999999999999887 99999999
Q ss_pred hhhcCCC----------CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 687 VCAQGGD----------AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 687 a~~~~~~----------~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
++..... .....||..|+|||...... ++.++|||||||++|||+||+.||...
T Consensus 157 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---------~~~~~Di~slG~il~ell~g~~Pf~~~ 220 (330)
T 2izr_A 157 AKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKE---------QSRRDDLEALGHMFMYFLRGSLPWQGL 220 (330)
T ss_dssp CEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCC---------CCHHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred ceeeecCCCCccccccccCCcCCCccccChHHHcCCC---------CCchhHHHHHHHHHHHHhcCCCCcccc
Confidence 9865322 13457899999999876544 478999999999999999999999653
No 98
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=7.8e-36 Score=324.19 Aligned_cols=198 Identities=23% Similarity=0.287 Sum_probs=168.5
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC----HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK----TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLV 608 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~----~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV 608 (766)
+.|+..+.||+|+||.||+|+. .+|+.||||++...... .+++.+|++++++++|||||++++++.. ++..++|
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~~lv 132 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLR-EHTAWLV 132 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-TTEEEEE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE-CCeEEEE
Confidence 3488889999999999999995 67999999999754322 3578999999999999999999998776 5689999
Q ss_pred EeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhh
Q 004248 609 YKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVC 688 (766)
Q Consensus 609 ~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~ 688 (766)
|||++ |+|.+++.... ..+++.++..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 133 ~e~~~-g~l~~~l~~~~------~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~ 202 (348)
T 1u5q_A 133 MEYCL-GSASDLLEVHK------KPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSAS 202 (348)
T ss_dssp EECCS-EEHHHHHHHHT------SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCB
T ss_pred EecCC-CCHHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeeccCce
Confidence 99998 68888886433 2489999999999999999999998 99999999999999999999999999998
Q ss_pred hcCCCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 689 AQGGDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 689 ~~~~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
.... .....+|+.|+|||.+.....+. ++.++|||||||++|||+||+.||...
T Consensus 203 ~~~~-~~~~~gt~~y~aPE~~~~~~~~~------~~~~~DiwslG~il~ell~g~~p~~~~ 256 (348)
T 1u5q_A 203 IMAP-ANSFVGTPYWMAPEVILAMDEGQ------YDGKVDVWSLGITCIELAERKPPLFNM 256 (348)
T ss_dssp SSSS-BCCCCSCGGGCCHHHHHTTSSCC------BCTHHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred ecCC-CCcccCCcceeCHhhhccccCCC------CCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 6643 33457899999999874322121 578999999999999999999999543
No 99
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=2.4e-36 Score=332.02 Aligned_cols=196 Identities=20% Similarity=0.312 Sum_probs=167.2
Q ss_pred CCCCccceeecCCcceEEEEEEc-CCcEEEEEEeeccccC--HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEe
Q 004248 534 GDFSDANLIKNGHSGDLFRGILE-GGIPVVIKRIDLQSVK--TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYK 610 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~--~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~E 610 (766)
++|...+.||+|+||.||+|+.. +++.||||.++..... .++|.+|+++|++++|||||+++++|.. ++..|+|||
T Consensus 114 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~~lv~e 192 (377)
T 3cbl_A 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQ-KQPIYIVME 192 (377)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECS-SSSCEEEEE
T ss_pred HHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEec-CCCcEEEEE
Confidence 46788899999999999999965 7899999998754322 3468999999999999999999998865 567999999
Q ss_pred eCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhc
Q 004248 611 YMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQ 690 (766)
Q Consensus 611 y~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~ 690 (766)
||++|+|.++++..+ ..+++.++..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++..
T Consensus 193 ~~~~g~L~~~l~~~~------~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~ 263 (377)
T 3cbl_A 193 LVQGGDFLTFLRTEG------ARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGMSREE 263 (377)
T ss_dssp CCTTCBHHHHHHHHG------GGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred cCCCCCHHHHHHhcC------CCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCCCceec
Confidence 999999999997543 2489999999999999999999998 9999999999999999999999999999865
Q ss_pred CCCC-----ccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCC
Q 004248 691 GGDA-----HQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLS 748 (766)
Q Consensus 691 ~~~~-----~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~ 748 (766)
.... ....++..|+|||....+. ++.++|||||||++|||+| |+.||..
T Consensus 264 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~DvwslG~il~el~t~g~~p~~~ 318 (377)
T 3cbl_A 264 ADGVYAASGGLRQVPVKWTAPEALNYGR---------YSSESDVWSFGILLWETFSLGASPYPN 318 (377)
T ss_dssp TTSEEECCSSCCEEEGGGSCHHHHHHCE---------EEHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred CCCceeecCCCCCCCcCcCCHhHhccCC---------CCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 3221 1223567799999875433 5789999999999999999 9999854
No 100
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=9.5e-36 Score=329.70 Aligned_cols=195 Identities=13% Similarity=0.167 Sum_probs=158.2
Q ss_pred CCCCcc-ceeecCCcceEEEEEE-cCCcEEEEEEeeccccCHHHHHHHHHHHhh-cCCCCcccceeEEEe---cCCcEEE
Q 004248 534 GDFSDA-NLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVKTEAYLLELDFFSK-VSHARLVPLLGHCME---RENEKFL 607 (766)
Q Consensus 534 ~~~~~~-~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~E~~~l~~-l~H~niv~l~~~~~~---~~~~~~l 607 (766)
++|... ++||+|+||+||+|.. .+|+.||||+++. ...+.+|++++.+ .+|||||++++++.. .++..|+
T Consensus 61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~l 136 (400)
T 1nxk_A 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLI 136 (400)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEE
T ss_pred ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc----chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEE
Confidence 456655 6899999999999995 5789999999863 3467889998754 589999999997653 1346899
Q ss_pred EEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCC---CCcEEeccc
Q 004248 608 VYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDD---KFEVRLGSL 684 (766)
Q Consensus 608 V~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~---~~~~kl~DF 684 (766)
|||||++|+|.+++..... ..+++.++..|+.||+.||+|||+. +||||||||+|||++. ++.+||+||
T Consensus 137 v~E~~~gg~L~~~l~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~DF 208 (400)
T 1nxk_A 137 VMECLDGGELFSRIQDRGD-----QAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDF 208 (400)
T ss_dssp EEECCCSEEHHHHHHCC--------CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEECCC
T ss_pred EEEeCCCCcHHHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEEec
Confidence 9999999999999976432 3489999999999999999999997 9999999999999997 789999999
Q ss_pred hhhhhcCC--CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 685 SEVCAQGG--DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 685 G~a~~~~~--~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
|+++.... .....++|+.|+|||.+.... ++.++|||||||++|||+||+.||...
T Consensus 209 G~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~---------~~~~~DiwslG~il~ell~g~~pf~~~ 266 (400)
T 1nxk_A 209 GFAKETTSHNSLTTPCYTPYYVAPEVLGPEK---------YDKSCDMWSLGVIMYILLCGYPPFYSN 266 (400)
T ss_dssp TTCEECC-----------CTTCCGGGSCCCC---------SSSHHHHHHHHHHHHHHHHSSCSCCCC
T ss_pred ccccccCCCCccccCCCCCCccCHhhcCCCC---------CCCcccHHHHHHHHHHHHhCCCCCCCC
Confidence 99986532 234567899999999885543 578999999999999999999999543
No 101
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=1.2e-35 Score=317.07 Aligned_cols=197 Identities=18% Similarity=0.306 Sum_probs=163.6
Q ss_pred CCCCccceeecCCcceEEEEEEcCCcEEEEEEeeccccC---HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEe
Q 004248 534 GDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVK---TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYK 610 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~---~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~E 610 (766)
++|...+.||+|+||.||+|+... .+|+|.++..... .+.|.+|++++++++||||+++++++. ++..++|||
T Consensus 36 ~~~~~~~~lG~G~~g~Vy~~~~~~--~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~--~~~~~lv~e 111 (307)
T 3lb7_A 36 SEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT--KDNLAIVTQ 111 (307)
T ss_dssp TSCCEEEEEEECSSCEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC--SSSCEEEEE
T ss_pred cceEEEeEecCCCCeEEEEEEECC--EEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc--cCcEEEEEe
Confidence 578889999999999999998543 5899988653332 467999999999999999999999764 356899999
Q ss_pred eCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhc
Q 004248 611 YMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQ 690 (766)
Q Consensus 611 y~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~ 690 (766)
|+++|+|.+++.... ..+++.++..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++..
T Consensus 112 ~~~~~~L~~~l~~~~------~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~ 182 (307)
T 3lb7_A 112 WCEGSSLYKHLHVQE------TKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVK 182 (307)
T ss_dssp CCSSCBHHHHHHTSC------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCSSSEEECTTSCEEECCCCSSCC-
T ss_pred cCCCCcHHHHHHhcc------cCCCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCChhhEEEcCCCCEEEccCCCceec
Confidence 999999999997543 2489999999999999999999998 9999999999999999999999999999754
Q ss_pred C-----CCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 691 G-----GDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 691 ~-----~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
. .......+|..|+|||.+.....+. ++.++|||||||++|||+||+.||...
T Consensus 183 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~------~~~~~Di~slG~il~elltg~~Pf~~~ 240 (307)
T 3lb7_A 183 SRWSGSQQVEQPTGSVLWMAPEVIRMQDNNP------FSFQSDVYSYGIVLYELMTGELPYSHI 240 (307)
T ss_dssp -----------CCCCTTSCCHHHHHCCSSCC------CCHHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred ccccccccccCCCCCcceECcceeeccCCCC------CCchhhHHHHHHHHHHHHhCCCCCccC
Confidence 2 1223456899999999875322221 578999999999999999999999643
No 102
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=1.1e-35 Score=349.88 Aligned_cols=198 Identities=14% Similarity=0.135 Sum_probs=171.3
Q ss_pred HhCCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccc----cCHHHHHHHHHHHhhc-CCCCcccceeEEEecCCcE
Q 004248 532 ATGDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQS----VKTEAYLLELDFFSKV-SHARLVPLLGHCMERENEK 605 (766)
Q Consensus 532 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~----~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~ 605 (766)
..++|+..++||+|+||.||+|+. .+++.||||+++... ...+.+.+|.+++..+ +||||+++++++.+ .+..
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~-~~~~ 417 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQT-MDRL 417 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBC-SSEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEe-CCEE
Confidence 456899999999999999999995 568899999997542 2356788999999988 79999999986544 6789
Q ss_pred EEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccch
Q 004248 606 FLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLS 685 (766)
Q Consensus 606 ~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG 685 (766)
|+||||+++|+|.+++.+.+. +++.++..|+.||+.||+|||+. +||||||||+|||++.++++||+|||
T Consensus 418 ~lV~E~~~gg~L~~~l~~~~~-------~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~DFG 487 (674)
T 3pfq_A 418 YFVMEYVNGGDLMYHIQQVGR-------FKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFG 487 (674)
T ss_dssp EEEEECCCSCBHHHHHHHHSS-------CCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEECCCT
T ss_pred EEEEeCcCCCcHHHHHHhcCC-------CCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEeecc
Confidence 999999999999999986543 89999999999999999999998 99999999999999999999999999
Q ss_pred hhhhc---CCCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 686 EVCAQ---GGDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 686 ~a~~~---~~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
+|+.. +......+||+.|+|||.+.... ++.++|||||||++|||+||+.||...
T Consensus 488 la~~~~~~~~~~~~~~GT~~Y~APE~l~~~~---------~~~~~DvwSlGvilyelltG~~Pf~~~ 545 (674)
T 3pfq_A 488 MCKENIWDGVTTKTFCGTPDYIAPEIIAYQP---------YGKSVDWWAFGVLLYEMLAGQAPFEGE 545 (674)
T ss_dssp TCEECCCTTCCBCCCCSCSSSCCHHHHTCCC---------BSTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred eeeccccCCcccccccCCCcccCHhhhcCCC---------CCccceEechHHHHHHHHcCCCCCCCC
Confidence 99864 22345567999999999886544 478999999999999999999999643
No 103
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=2e-35 Score=317.89 Aligned_cols=189 Identities=15% Similarity=0.162 Sum_probs=147.9
Q ss_pred cceeecCCcceEEEEEE-cCCcEEEEEEeeccccCHHHHHHHHHHHhhcC-CCCcccceeEEEecCCcEEEEEeeCCCCC
Q 004248 539 ANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVKTEAYLLELDFFSKVS-HARLVPLLGHCMERENEKFLVYKYMPNGD 616 (766)
Q Consensus 539 ~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~~lV~Ey~~~Gs 616 (766)
.++||+|+||.||+|+. .+++.||||++... ....+.+|++++++++ |||||++++++.+ ++..|+||||+++|+
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~-~~~~~lv~e~~~~~~ 92 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR--MEANTQKEITALKLCEGHPNIVKLHEVFHD-QLHTFLVMELLNGGE 92 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG--GHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-SSEEEEEECCCCSCB
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh--hhhhHHHHHHHHHHhcCCCCeeEEEEEEEc-CCEEEEEEEccCCCc
Confidence 47899999999999995 56899999999643 3467889999999997 9999999998765 568999999999999
Q ss_pred hhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCC---cEEeccchhhhhcCC-
Q 004248 617 LSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKF---EVRLGSLSEVCAQGG- 692 (766)
Q Consensus 617 L~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~---~~kl~DFG~a~~~~~- 692 (766)
|.+++.+.+ .+++.++..++.|++.||+|||+. +|+||||||+|||++.++ .+||+|||+++....
T Consensus 93 L~~~l~~~~-------~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 162 (325)
T 3kn6_A 93 LFERIKKKK-------HFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPD 162 (325)
T ss_dssp HHHHHHHCS-------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-
T ss_pred HHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEeccccceecCCC
Confidence 999998654 389999999999999999999998 999999999999998765 899999999986532
Q ss_pred --CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 693 --DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 693 --~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
......+|..|+|||...... ++.++||||+||++|||+||+.||...
T Consensus 163 ~~~~~~~~~t~~y~aPE~~~~~~---------~~~~~DiwslG~il~~ll~g~~pf~~~ 212 (325)
T 3kn6_A 163 NQPLKTPCFTLHYAAPELLNQNG---------YDESCDLWSLGVILYTMLSGQVPFQSH 212 (325)
T ss_dssp ---------------------CC---------CCHHHHHHHHHHHHHHHHHSSCTTC--
T ss_pred CCcccccCCCcCccCHHHhcCCC---------CCCccchHHHHHHHHHHHhCCCCCCCC
Confidence 234456799999999876543 478999999999999999999999643
No 104
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.2e-35 Score=311.60 Aligned_cols=196 Identities=14% Similarity=0.203 Sum_probs=150.7
Q ss_pred CCCCccceeecCCcceEEEEE-EcCCcEEEEEEeecccc----CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGI-LEGGIPVVIKRIDLQSV----KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLV 608 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~-~~~g~~vavK~l~~~~~----~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV 608 (766)
++|+..+.||+|+||.||+|+ ..+|+.||+|++..... ..+.+.+|++++++++||||+++++++.+ ++..++|
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv 91 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKS-KDEIIMV 91 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEEC-SSCEEEE
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEec-CCeEEEE
Confidence 579999999999999999998 46789999999965432 25678999999999999999999998765 5689999
Q ss_pred EeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhh
Q 004248 609 YKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVC 688 (766)
Q Consensus 609 ~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~ 688 (766)
|||+ +|+|.+++.... .+++.++..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++
T Consensus 92 ~e~~-~~~l~~~~~~~~-------~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~ 160 (275)
T 2eue_A 92 IEYA-GNELFDYIVQRD-------KMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSN 160 (275)
T ss_dssp EECC-CEEHHHHHHTSS-------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCSSCC-
T ss_pred ehhc-CCcHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CCeeccCChHhEEECCCCCEEEeecccce
Confidence 9999 678888887543 389999999999999999999998 99999999999999999999999999997
Q ss_pred hcCCC--CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 689 AQGGD--AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 689 ~~~~~--~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
..... .....+|+.|+|||......+ .+.++||||+||++|||+||+.||...
T Consensus 161 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~--------~~~~~Di~slG~il~~l~~g~~pf~~~ 215 (275)
T 2eue_A 161 IMTDGNFLKTSCGSPNYAAPEVISGKLY--------AGPEVDVWSCGVILYVMLCRRLPFDDE 215 (275)
T ss_dssp --------------CTTCCHHHHCC-------------THHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred eccCcccccCCCCCcCcCCceeeeCCCC--------CCcccchHHHHHHHHHHHhCCCCCCCC
Confidence 65322 344568999999998765432 367999999999999999999999654
No 105
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=5.2e-36 Score=323.93 Aligned_cols=198 Identities=20% Similarity=0.228 Sum_probs=170.9
Q ss_pred HhCCCCccceeecCCcceEEEEE-EcCCcEEEEEEeecccc---------CHHHHHHHHHHHhhcCCCCcccceeEEEec
Q 004248 532 ATGDFSDANLIKNGHSGDLFRGI-LEGGIPVVIKRIDLQSV---------KTEAYLLELDFFSKVSHARLVPLLGHCMER 601 (766)
Q Consensus 532 ~~~~~~~~~~ig~G~~g~Vy~~~-~~~g~~vavK~l~~~~~---------~~~~~~~E~~~l~~l~H~niv~l~~~~~~~ 601 (766)
..++|+..+.||+|+||.||+|+ ..+++.||||++..... ..+.+.+|++++++++|||||++++++..
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~- 100 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFEN- 100 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEEC-
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEee-
Confidence 34578999999999999999998 46789999999976432 23367889999999999999999998765
Q ss_pred CCcEEEEEeeCCCC-ChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEE
Q 004248 602 ENEKFLVYKYMPNG-DLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVR 680 (766)
Q Consensus 602 ~~~~~lV~Ey~~~G-sL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~k 680 (766)
++..++||||+.+| +|.+++.+.. .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+|
T Consensus 101 ~~~~~lv~e~~~~g~~l~~~~~~~~-------~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~k 170 (335)
T 3dls_A 101 QGFFQLVMEKHGSGLDLFAFIDRHP-------RLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIK 170 (335)
T ss_dssp SSEEEEEEECCTTSCBHHHHHHTCC-------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEE
T ss_pred CCEEEEEEEeCCCCccHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCCcEE
Confidence 56899999999877 9999997654 389999999999999999999998 999999999999999999999
Q ss_pred eccchhhhhcCCC--CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 681 LGSLSEVCAQGGD--AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 681 l~DFG~a~~~~~~--~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
|+|||+++..... .....+|+.|+|||......+ .+.++|||||||++|||++|+.||..
T Consensus 171 L~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~--------~~~~~DiwslG~il~el~~g~~pf~~ 232 (335)
T 3dls_A 171 LIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPY--------RGPELEMWSLGVTLYTLVFEENPFCE 232 (335)
T ss_dssp ECCCTTCEECCTTCCBCEECSCGGGCCHHHHTTCCB--------CSHHHHHHHHHHHHHHHHHSSCSCSS
T ss_pred EeecccceECCCCCceeccCCCccccChhhhcCCCC--------CCCcccchhHHHHHHHHHhCCCchhh
Confidence 9999999876432 345568999999998765443 36899999999999999999999954
No 106
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=7e-36 Score=339.93 Aligned_cols=199 Identities=19% Similarity=0.346 Sum_probs=171.8
Q ss_pred hCCCCccceeecCCcceEEEEEEc-CCcEEEEEEeeccccCHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEee
Q 004248 533 TGDFSDANLIKNGHSGDLFRGILE-GGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKY 611 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey 611 (766)
.++|...+.||+|+||.||+|+.. ++..||||.++......++|.+|+++|++++|||||+++++|.. ++..|+||||
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~-~~~~~lv~E~ 297 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR-EPPFYIITEF 297 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSSCEEEEEC
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcccchHHHHHHHHHHHhcCCCCEeeEEEEEec-CCcEEEEEEc
Confidence 356788899999999999999965 48899999998766667889999999999999999999998865 5679999999
Q ss_pred CCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcC
Q 004248 612 MPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQG 691 (766)
Q Consensus 612 ~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~ 691 (766)
|++|+|.++++.... ..+++..+..++.||+.||+|||++ +||||||||+|||++.++.+||+|||+++...
T Consensus 298 ~~~g~L~~~l~~~~~-----~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 369 (495)
T 1opk_A 298 MTYGNLLDYLRECNR-----QEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMT 369 (495)
T ss_dssp CTTCBHHHHHHHSCT-----TTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCEECCT
T ss_pred cCCCCHHHHHHhcCc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecccceecc
Confidence 999999999976432 3489999999999999999999998 99999999999999999999999999998764
Q ss_pred CCC----ccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCCC
Q 004248 692 GDA----HQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLSS 749 (766)
Q Consensus 692 ~~~----~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~~ 749 (766)
... ....++..|+|||.+.... ++.++|||||||++|||+| |+.||...
T Consensus 370 ~~~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~sDvwSlG~~l~el~t~g~~p~~~~ 423 (495)
T 1opk_A 370 GDTYTAHAGAKFPIKWTAPESLAYNK---------FSIKSDVWAFGVLLWEIATYGMSPYPGI 423 (495)
T ss_dssp TCCEECCTTCCCCGGGCCHHHHHHCE---------ECHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred CCceeecCCCcCCcceeCHhHHhcCC---------CCcHHhHHhHHHHHHHHHhCCCCCCCCC
Confidence 321 2234567899999875433 5789999999999999999 99998543
No 107
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=6.1e-37 Score=336.82 Aligned_cols=211 Identities=13% Similarity=0.141 Sum_probs=163.5
Q ss_pred hCCCCccceeecCCcceEEEEE-EcCCcEEEEEEeecccc----CHHHHHHHH---HHHhhcCCCCcccce-------eE
Q 004248 533 TGDFSDANLIKNGHSGDLFRGI-LEGGIPVVIKRIDLQSV----KTEAYLLEL---DFFSKVSHARLVPLL-------GH 597 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~-~~~g~~vavK~l~~~~~----~~~~~~~E~---~~l~~l~H~niv~l~-------~~ 597 (766)
.++|...+.||+|+||.||+|+ ..+|+.||||++..... ..+.|.+|+ +++++++|||||+++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 3568888999999999999999 46799999999974322 256799999 556666899999998 54
Q ss_pred EEecCC----------------cEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCe
Q 004248 598 CMEREN----------------EKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPF 661 (766)
Q Consensus 598 ~~~~~~----------------~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~i 661 (766)
+...+. ..|+||||+ +|+|.+++...+........++|..+..|+.||+.||+|||++ +|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GL 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---Ce
Confidence 433211 279999999 5899999986432111123466789999999999999999998 99
Q ss_pred EecCCCCCCeeeCCCCcEEeccchhhhhcCCCCccceeeecccCCCCCCCCcee-e-eeeeeecccccceecchHHHHHH
Q 004248 662 VHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQSSEQGSSG-M-VIYLFIIFTIFHIYFHGNPLFSA 739 (766)
Q Consensus 662 iHrDlKp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~t~~y~aPe~~~~~~~g-~-~~~~~~~~~~~Dv~s~Gvvl~el 739 (766)
+||||||+|||++.++.+||+|||+++..+.......| +.|+|||.+.....+ + ......++.++|||||||++|||
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~el 306 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWI 306 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTCEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecCCcccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHH
Confidence 99999999999999999999999999876555555667 899999987543000 0 00001168999999999999999
Q ss_pred hcCCCCCCC
Q 004248 740 IFNNHLNLS 748 (766)
Q Consensus 740 ltG~~p~~~ 748 (766)
+||+.||..
T Consensus 307 ltg~~Pf~~ 315 (377)
T 3byv_A 307 WCADLPITK 315 (377)
T ss_dssp HHSSCCC--
T ss_pred HHCCCCCcc
Confidence 999999954
No 108
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=8.1e-36 Score=311.43 Aligned_cols=201 Identities=17% Similarity=0.278 Sum_probs=169.1
Q ss_pred CCCCccceeecCCcceEEEEEEcCCcEEEEEEeeccccC---HHHHHHHHHHHhhcCCCCcccceeEEEec-CCcEEEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVK---TEAYLLELDFFSKVSHARLVPLLGHCMER-ENEKFLVY 609 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~---~~~~~~E~~~l~~l~H~niv~l~~~~~~~-~~~~~lV~ 609 (766)
++|...+.||+|+||.||+|+.. ++.||||++...... .++|.+|++++++++||||+++++++... .+..++||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (271)
T 3kmu_A 10 KQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLIT 88 (271)
T ss_dssp GGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEE
T ss_pred HHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeee
Confidence 46888999999999999999975 889999999765432 45799999999999999999999987653 25789999
Q ss_pred eeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhh
Q 004248 610 KYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCA 689 (766)
Q Consensus 610 Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~ 689 (766)
||+++|+|.+++.+... ..+++.++..++.|++.||+|||+. .++|+||||||+||+++.++.+||+|||++..
T Consensus 89 e~~~~~~L~~~l~~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~-~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~ 162 (271)
T 3kmu_A 89 HWMPYGSLYNVLHEGTN-----FVVDQSQAVKFALDMARGMAFLHTL-EPLIPRHALNSRSVMIDEDMTARISMADVKFS 162 (271)
T ss_dssp ECCTTCBHHHHHHSCSS-----CCCCHHHHHHHHHHHHHHHHHHTTS-SSCCTTCCCSGGGEEECTTSCEEEEGGGSCCT
T ss_pred cccCCCcHHHHHhhccc-----CCCCHHHHHHHHHHHHHHHHHHhcC-CCceecCCCccceEEEcCCcceeEEeccceee
Confidence 99999999999986432 3589999999999999999999986 12399999999999999999999999888755
Q ss_pred cCCCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 690 QGGDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 690 ~~~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
... ....+|+.|+|||......++. ++.++|||||||++|||+||+.||...
T Consensus 163 ~~~--~~~~~t~~y~aPE~~~~~~~~~------~~~~~Di~slG~il~el~~g~~p~~~~ 214 (271)
T 3kmu_A 163 FQS--PGRMYAPAWVAPEALQKKPEDT------NRRSADMWSFAVLLWELVTREVPFADL 214 (271)
T ss_dssp TSC--TTCBSCGGGSCHHHHHSCGGGS------CHHHHHHHHHHHHHHHHHHCSCTTTTS
T ss_pred ecc--cCccCCccccChhhhccCCCCC------CCchhhHHHHHHHHHHHHhCCCCcccc
Confidence 322 3346789999999876554432 456899999999999999999999543
No 109
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.4e-35 Score=316.70 Aligned_cols=197 Identities=18% Similarity=0.197 Sum_probs=165.4
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC---HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK---TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVY 609 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~---~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~ 609 (766)
++|+..+.||+|+||.||+|+. .+|+.||||++...... .+.+.+|++++++++||||+++++++.. ++..++||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~ 81 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRR-KRRLHLVF 81 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-TTEEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeec-CCeEEEEE
Confidence 5788999999999999999996 46999999998654433 4578899999999999999999998876 56899999
Q ss_pred eeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhh
Q 004248 610 KYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCA 689 (766)
Q Consensus 610 Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~ 689 (766)
||+++++|.+++...+ .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 82 e~~~~~~l~~~~~~~~-------~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~ 151 (311)
T 4agu_A 82 EYCDHTVLHELDRYQR-------GVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARL 151 (311)
T ss_dssp ECCSEEHHHHHHHTSS-------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EeCCCchHHHHHhhhc-------CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCCchh
Confidence 9999999999886543 389999999999999999999998 999999999999999999999999999986
Q ss_pred cCCC---CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 690 QGGD---AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 690 ~~~~---~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
.... .....+|..|+|||....... ++.++||||+||++|||+||+.||...
T Consensus 152 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~--------~~~~~Di~slG~il~~l~~g~~p~~~~ 206 (311)
T 4agu_A 152 LTGPSDYYDDEVATRWYRSPELLVGDTQ--------YGPPVDVWAIGCVFAELLSGVPLWPGK 206 (311)
T ss_dssp CC------------GGGCCHHHHHTCSC--------CCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccCcccccCCCcCCccccChHHHhcCCC--------CCcchhhHHHHHHHHHHHhCCCCCCCC
Confidence 5322 234578999999998754221 578999999999999999999999543
No 110
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.8e-35 Score=316.21 Aligned_cols=193 Identities=19% Similarity=0.155 Sum_probs=161.7
Q ss_pred CCCCccceeecCCcceEEEEEEc-CCcEEEEEEeeccccC---HHHHHHHHHHHhhc-CCCCcccceeEEEecCCcEEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGILE-GGIPVVIKRIDLQSVK---TEAYLLELDFFSKV-SHARLVPLLGHCMERENEKFLV 608 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~---~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~~lV 608 (766)
++|+..++||+|+||+||+|+.. +|+.||||++...... ..++.+|+..+.++ +|||||+++++|.+ ++..++|
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~-~~~~~lv 135 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEE-GGILYLQ 135 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-TTEEEEE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEe-CCEEEEE
Confidence 46899999999999999999964 7999999998654332 34566677666666 89999999998876 5789999
Q ss_pred EeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhh
Q 004248 609 YKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVC 688 (766)
Q Consensus 609 ~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~ 688 (766)
|||+ +|+|.+++...+ ..++|.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 136 ~e~~-~~~L~~~~~~~~------~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG~a~ 205 (311)
T 3p1a_A 136 TELC-GPSLQQHCEAWG------ASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLLV 205 (311)
T ss_dssp EECC-CCBHHHHHHHHC------SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCTTCE
T ss_pred Eecc-CCCHHHHHHhcC------CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccceeee
Confidence 9999 679999987643 2499999999999999999999998 99999999999999999999999999987
Q ss_pred hcCCC--CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCC
Q 004248 689 AQGGD--AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNL 747 (766)
Q Consensus 689 ~~~~~--~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~ 747 (766)
..... .....||+.|+|||.+.+ . ++.++|||||||++|||++|+.|+.
T Consensus 206 ~~~~~~~~~~~~gt~~y~aPE~~~~-~---------~~~~~DiwslG~il~el~~g~~~~~ 256 (311)
T 3p1a_A 206 ELGTAGAGEVQEGDPRYMAPELLQG-S---------YGTAADVFSLGLTILEVACNMELPH 256 (311)
T ss_dssp ECC------CCCCCGGGCCGGGGGT-C---------CSTHHHHHHHHHHHHHHHHTCCCCS
T ss_pred ecccCCCCcccCCCccccCHhHhcC-C---------CCchhhHHHHHHHHHHHHhCCCCCC
Confidence 66432 234468999999998753 2 4789999999999999999987764
No 111
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=9.9e-36 Score=325.68 Aligned_cols=197 Identities=17% Similarity=0.246 Sum_probs=150.9
Q ss_pred hCCCCccceeecCCcceEEEEE-EcCCcEEEEEEeecccc---CHHHHHHHHHHHhhcCCCCcccceeEEEec-----CC
Q 004248 533 TGDFSDANLIKNGHSGDLFRGI-LEGGIPVVIKRIDLQSV---KTEAYLLELDFFSKVSHARLVPLLGHCMER-----EN 603 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~-~~~g~~vavK~l~~~~~---~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-----~~ 603 (766)
.++|+..+.||+|+||.||+|. ..+|+.||||++..... ..+++.+|++++++++|||||++++++... ..
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 107 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence 4679999999999999999998 46799999999965332 256789999999999999999999987542 24
Q ss_pred cEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEecc
Q 004248 604 EKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGS 683 (766)
Q Consensus 604 ~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~D 683 (766)
..|+|+||+ +++|.+++... .+++..+..++.||++||+|||+. +|+||||||+|||++.++.+||+|
T Consensus 108 ~~~lv~e~~-~~~L~~~~~~~--------~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~D 175 (367)
T 2fst_X 108 DVYLVTHLM-GADLNNIVKCQ--------KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILD 175 (367)
T ss_dssp CCEEEEECC-CEECC-----C--------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC
T ss_pred eEEEEeccc-CCCHHHHHhcC--------CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEee
Confidence 589999999 68999988642 389999999999999999999998 999999999999999999999999
Q ss_pred chhhhhcCCCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 684 LSEVCAQGGDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 684 FG~a~~~~~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
||+++..........+|++|+|||.+..... ++.++||||+||++|||+||+.||...
T Consensus 176 FG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~--------~~~~~DiwslG~il~ell~g~~pf~~~ 233 (367)
T 2fst_X 176 FGLARHTADEMTGYVATRWYRAPEIMLNWMH--------YNQTVDIWSVGCIMAELLTGRTLFPGT 233 (367)
T ss_dssp ---------------CCCTTCCHHHHTTCCS--------CCTTHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccccccccccCCCcCcCcCccChHHHcCCcC--------CCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 9999887666666789999999998754221 578999999999999999999999543
No 112
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=2.7e-35 Score=308.64 Aligned_cols=199 Identities=16% Similarity=0.191 Sum_probs=171.4
Q ss_pred hCCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC--HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEE
Q 004248 533 TGDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK--TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVY 609 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~--~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~ 609 (766)
.++|+..+.||+|+||.||+|.. .+++.||||.+...... .+.+.+|++++++++||||+++++++.+ ++..|+||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~ 84 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRRE-GNIQYLFL 84 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEE-TTEEEEEE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEc-CCEEEEEE
Confidence 35688899999999999999996 47899999999754432 5689999999999999999999998765 56889999
Q ss_pred eeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhh
Q 004248 610 KYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCA 689 (766)
Q Consensus 610 Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~ 689 (766)
||+++|+|.+++.... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.++.
T Consensus 85 e~~~~~~L~~~l~~~~-------~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~ 154 (276)
T 2yex_A 85 EYCSGGELFDRIEPDI-------GMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATV 154 (276)
T ss_dssp ECCTTEEGGGGSBTTT-------BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred EecCCCcHHHHHhhcc-------CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCCCccc
Confidence 9999999999996542 389999999999999999999998 999999999999999999999999999975
Q ss_pred cCC-----CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCCc
Q 004248 690 QGG-----DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSSR 750 (766)
Q Consensus 690 ~~~-----~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~~ 750 (766)
... ......+|..|+|||......+ .+.++|||||||++|||+||+.||....
T Consensus 155 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~--------~~~~~Di~slG~il~~l~~g~~p~~~~~ 212 (276)
T 2yex_A 155 FRYNNRERLLNKMCGTLPYVAPELLKRREF--------HAEPVDVWSCGIVLTAMLAGELPWDQPS 212 (276)
T ss_dssp CEETTEECCBCCCCSCGGGCCGGGGTCSSB--------CHHHHHHHHHHHHHHHHHHSSCCCSCSC
T ss_pred cCCCcchhcccCCccccCccChHHHhcCCC--------CCCcchHHHHHHHHHHHHhCCCCCCCCc
Confidence 421 1234567899999998765442 3679999999999999999999996543
No 113
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=2.4e-35 Score=309.41 Aligned_cols=195 Identities=15% Similarity=0.167 Sum_probs=169.7
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeecccc-CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEee
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV-KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKY 611 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey 611 (766)
++|...+.||+|+||.||+|.. .++..||+|++..... ..+++.+|++++++++||||+++++++.. ++..++||||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~ 87 (277)
T 3f3z_A 9 QYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFED-NTDIYLVMEL 87 (277)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-SSEEEEEEEC
T ss_pred hhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCeEEEEEec
Confidence 4588899999999999999995 4578999999976543 36789999999999999999999998765 5689999999
Q ss_pred CCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeee---CCCCcEEeccchhhh
Q 004248 612 MPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILL---DDKFEVRLGSLSEVC 688 (766)
Q Consensus 612 ~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl---~~~~~~kl~DFG~a~ 688 (766)
+++|+|.+++...+ .+++.++..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+++
T Consensus 88 ~~~~~L~~~~~~~~-------~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~ 157 (277)
T 3f3z_A 88 CTGGELFERVVHKR-------VFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAA 157 (277)
T ss_dssp CCSCBHHHHHHHHC-------SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCE
T ss_pred cCCCcHHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEecccce
Confidence 99999999987654 389999999999999999999998 99999999999999 788999999999997
Q ss_pred hcCC--CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 689 AQGG--DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 689 ~~~~--~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
.... ......+|+.|+|||..... ++.++|||||||++|||+||+.||...
T Consensus 158 ~~~~~~~~~~~~~t~~y~aPE~~~~~----------~~~~~Di~slG~~l~~l~~g~~p~~~~ 210 (277)
T 3f3z_A 158 RFKPGKMMRTKVGTPYYVSPQVLEGL----------YGPECDEWSAGVMMYVLLCGYPPFSAP 210 (277)
T ss_dssp ECCTTSCBCCCCSCTTTCCHHHHTTC----------BCTTHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred eccCccchhccCCCCCccChHHhccc----------CCchhhehhHHHHHHHHHHCCCCCCCC
Confidence 6532 23455789999999986432 478999999999999999999999543
No 114
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6.7e-36 Score=325.74 Aligned_cols=197 Identities=18% Similarity=0.145 Sum_probs=168.2
Q ss_pred CCCCccceeecCCcceEEEEEE----cCCcEEEEEEeeccc-----cCHHHHHHHHHHHhhc-CCCCcccceeEEEecCC
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL----EGGIPVVIKRIDLQS-----VKTEAYLLELDFFSKV-SHARLVPLLGHCMEREN 603 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~----~~g~~vavK~l~~~~-----~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~ 603 (766)
++|+..+.||+|+||.||+|+. .+|+.||||+++... ...+.+.+|+++++++ +||||+++++++.. ++
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~-~~ 132 (355)
T 1vzo_A 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQT-ET 132 (355)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEE-TT
T ss_pred cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEee-Cc
Confidence 5688999999999999999996 478999999986532 1245688899999999 69999999997765 56
Q ss_pred cEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEecc
Q 004248 604 EKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGS 683 (766)
Q Consensus 604 ~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~D 683 (766)
..++||||+++|+|.+++.... .+++.++..++.||+.||+|||+. +|+||||||+|||++.++.+||+|
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~~~-------~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~D 202 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQRE-------RFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTD 202 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHHHS-------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESC
T ss_pred eEEEEeecCCCCCHHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcEEEee
Confidence 8999999999999999997654 389999999999999999999998 999999999999999999999999
Q ss_pred chhhhhcCC----CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 684 LSEVCAQGG----DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 684 FG~a~~~~~----~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
||+++.... ......+|..|+|||........ ++.++|||||||++|||+||+.||..
T Consensus 203 fG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-------~~~~~DvwslG~il~ell~g~~pf~~ 264 (355)
T 1vzo_A 203 FGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSG-------HDKAVDWWSLGVLMYELLTGASPFTV 264 (355)
T ss_dssp SSEEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC----------CTHHHHHHHHHHHHHHHHSSCTTSC
T ss_pred CCCCeecccCCCCcccCcccCcCccChhhhcCCCCC-------CCchhhHHHHHHHHHHHHHCCCCCcc
Confidence 999976522 12345689999999987653322 47899999999999999999999953
No 115
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=1.6e-35 Score=311.28 Aligned_cols=197 Identities=16% Similarity=0.206 Sum_probs=167.6
Q ss_pred hCCCCccceeecCCcceEEEEEE-cCCcEEEEEEeecccc----CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEE
Q 004248 533 TGDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV----KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFL 607 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~----~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~l 607 (766)
.++|+..+.||+|+||.||+|.. .+++.||||++..... ..+.+.+|++++++++||||+++++++.+ ++..++
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~l 86 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHD-ATRVYL 86 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEEC-SSEEEE
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEec-CCEEEE
Confidence 45688899999999999999985 5678999999965432 25679999999999999999999998765 568999
Q ss_pred EEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhh
Q 004248 608 VYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEV 687 (766)
Q Consensus 608 V~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a 687 (766)
||||+++|+|.+++.+.. .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 87 v~e~~~~~~l~~~l~~~~-------~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~Dfg~~ 156 (279)
T 3fdn_A 87 ILEYAPLGTVYRELQKLS-------KFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS 156 (279)
T ss_dssp EECCCTTEEHHHHHHHHS-------SCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECSCCEE
T ss_pred EEecCCCCcHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEecccc
Confidence 999999999999997653 389999999999999999999997 9999999999999999999999999998
Q ss_pred hhcCC-CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 688 CAQGG-DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 688 ~~~~~-~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
..... ......+|..|+|||...... ++.++||||+||++|||++|+.||...
T Consensus 157 ~~~~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~Di~slG~il~~l~~g~~p~~~~ 210 (279)
T 3fdn_A 157 VHAPSSRRTDLCGTLDYLPPEMIEGRM---------HDEKVDLWSLGVLCYEFLVGKPPFEAN 210 (279)
T ss_dssp SCC--------CCCCTTCCHHHHTTCC---------CCTTHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred ccCCcccccccCCCCCccCHhHhccCC---------CCccchhHhHHHHHHHHHHCCCCCCCC
Confidence 66532 234457899999999876543 468999999999999999999999643
No 116
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=2.4e-35 Score=316.67 Aligned_cols=195 Identities=16% Similarity=0.150 Sum_probs=170.0
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeecccc-------CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcE
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV-------KTEAYLLELDFFSKVSHARLVPLLGHCMERENEK 605 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-------~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 605 (766)
++|+..+.||+|+||.||+|+. .+|+.||||.+..... ..+++.+|++++++++||||+++++++.+ ++..
T Consensus 12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~ 90 (321)
T 2a2a_A 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYEN-RTDV 90 (321)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-SSEE
T ss_pred ccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEec-CCEE
Confidence 4588899999999999999995 4689999999975432 25679999999999999999999998765 5689
Q ss_pred EEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCC----cEEe
Q 004248 606 FLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKF----EVRL 681 (766)
Q Consensus 606 ~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~----~~kl 681 (766)
++||||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++ .+||
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~-------~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~~~kl 160 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQKE-------SLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKL 160 (321)
T ss_dssp EEEECCCCSCBHHHHHHTCS-------CEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEE
T ss_pred EEEEEcCCCCcHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcCCEEE
Confidence 99999999999999997543 389999999999999999999998 999999999999999888 7999
Q ss_pred ccchhhhhcCCC--CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 682 GSLSEVCAQGGD--AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 682 ~DFG~a~~~~~~--~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
+|||+++..... .....+|+.|+|||...... ++.++|||||||++|||+||+.||..
T Consensus 161 ~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---------~~~~~Di~slG~il~~l~~g~~pf~~ 220 (321)
T 2a2a_A 161 IDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEP---------LGLEADMWSIGVITYILLSGASPFLG 220 (321)
T ss_dssp CCCTTCEECCTTCCCCCCCSCGGGCCHHHHTTCC---------CCTHHHHHHHHHHHHHHHHSCCSSCC
T ss_pred ccCccceecCccccccccCCCCCccCcccccCCC---------CCCccccHHHHHHHHHHHHCCCCCCC
Confidence 999999876432 34456899999999876543 47899999999999999999999954
No 117
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=8.7e-36 Score=321.06 Aligned_cols=196 Identities=18% Similarity=0.303 Sum_probs=161.6
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCc----EEEEEEeeccc--cCHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGI----PVVIKRIDLQS--VKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKF 606 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~----~vavK~l~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~ 606 (766)
++|+..++||+|+||.||+|+. .+++ +||+|.+.... ...++|.+|++++++++|||||+++++|.. +..+
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~ 92 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT--STVQ 92 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEES--SSEE
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEec--CCeE
Confidence 4688899999999999999984 4444 46888875433 235789999999999999999999998875 3589
Q ss_pred EEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchh
Q 004248 607 LVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSE 686 (766)
Q Consensus 607 lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~ 686 (766)
+|+||+++|+|.+++..... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 93 ~v~e~~~~g~L~~~l~~~~~------~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~ 163 (327)
T 3poz_A 93 LITQLMPFGCLLDYVREHKD------NIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGL 163 (327)
T ss_dssp EEEECCTTCBHHHHHHHSTT------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTH
T ss_pred EEEEecCCCcHHHHHHhcCC------CCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEccCcc
Confidence 99999999999999986542 489999999999999999999998 999999999999999999999999999
Q ss_pred hhhcCCCC-----ccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCCC
Q 004248 687 VCAQGGDA-----HQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLSS 749 (766)
Q Consensus 687 a~~~~~~~-----~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~~ 749 (766)
++...... ....+|..|+|||...... ++.++|||||||++|||+| |+.||...
T Consensus 164 a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~---------~~~~~Di~slG~il~ellt~g~~p~~~~ 223 (327)
T 3poz_A 164 AKLLGAEEKEYHAEGGKVPIKWMALESILHRI---------YTHQSDVWSYGVTVWELMTFGSKPYDGI 223 (327)
T ss_dssp HHHHTTTCC-------CCCGGGSCHHHHHHCC---------CCHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred eeEccCCcccccccCCCccccccChHHhccCC---------CCchhhhhhhHHHHHHHHhcCCCCccCC
Confidence 98763321 2234577899999875443 5789999999999999999 99999643
No 118
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=1.2e-35 Score=320.37 Aligned_cols=198 Identities=17% Similarity=0.271 Sum_probs=161.8
Q ss_pred HhCCCCccceeecCCcceEEEEE-EcCCcEEEEEEeeccccC---HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEE
Q 004248 532 ATGDFSDANLIKNGHSGDLFRGI-LEGGIPVVIKRIDLQSVK---TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFL 607 (766)
Q Consensus 532 ~~~~~~~~~~ig~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~---~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~l 607 (766)
..++|+..+.||+|+||.||+|+ ..+++.||||+++..... .+.+.+|++++++++|||||++++++.. ++..++
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~l 110 (329)
T 3gbz_A 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHH-NHRLHL 110 (329)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEE-TTEEEE
T ss_pred chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEec-CCEEEE
Confidence 44679999999999999999998 457999999999654332 4568899999999999999999998776 568999
Q ss_pred EEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeee-----CCCCcEEec
Q 004248 608 VYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILL-----DDKFEVRLG 682 (766)
Q Consensus 608 V~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl-----~~~~~~kl~ 682 (766)
||||++ |+|.+++..... +++.++..++.|++.||+|||+. +|+||||||+|||+ +.++.+||+
T Consensus 111 v~e~~~-~~L~~~~~~~~~-------~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~kl~ 179 (329)
T 3gbz_A 111 IFEYAE-NDLKKYMDKNPD-------VSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIG 179 (329)
T ss_dssp EEECCS-EEHHHHHHHCTT-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCEEEEC
T ss_pred EEecCC-CCHHHHHhhcCC-------CCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccceEEEC
Confidence 999998 599999976543 89999999999999999999998 99999999999999 455669999
Q ss_pred cchhhhhcCC---CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 683 SLSEVCAQGG---DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 683 DFG~a~~~~~---~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
|||+++.... ......+|..|+|||.+..... ++.++|||||||++|||+||+.||...
T Consensus 180 Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~--------~~~~~DiwslG~il~ell~g~~pf~~~ 241 (329)
T 3gbz_A 180 DFGLARAFGIPIRQFTHEIITLWYRPPEILLGSRH--------YSTSVDIWSIACIWAEMLMKTPLFPGD 241 (329)
T ss_dssp CTTHHHHHC-----------CCTTCCHHHHTTCCC--------CCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cCCCccccCCcccccCCCcCCccccCHHHhcCCCC--------CCcHHHHHHHHHHHHHHHHCCCCcCCC
Confidence 9999987642 2344567999999998765332 578999999999999999999999543
No 119
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=3.5e-35 Score=308.39 Aligned_cols=198 Identities=17% Similarity=0.248 Sum_probs=154.5
Q ss_pred hCCCCccceeecCCcceEEEEEE-cCCcEEEEEEeecccc----CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEE
Q 004248 533 TGDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV----KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFL 607 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~----~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~l 607 (766)
.++|...+.||+|+||.||+|+. .+|+.||||.+..... ..+++.+|++++++++||||+++++++.. .+..++
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~l 88 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFED-SNYVYL 88 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEEC-SSEEEE
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEcc-CCeEEE
Confidence 35688899999999999999995 6799999999975432 24679999999999999999999998765 568999
Q ss_pred EEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhh
Q 004248 608 VYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEV 687 (766)
Q Consensus 608 V~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a 687 (766)
||||+++|+|.+++.... ..+++.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 89 v~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~ 159 (278)
T 3cok_A 89 VLEMCHNGEMNRYLKNRV------KPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLA 159 (278)
T ss_dssp EEECCTTEEHHHHHHTCS------SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCCTTC
T ss_pred EEecCCCCcHHHHHhhcc------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEeecce
Confidence 999999999999997543 2489999999999999999999998 9999999999999999999999999999
Q ss_pred hhcCC---CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 688 CAQGG---DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 688 ~~~~~---~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
+.... ......+|+.|+|||...... ++.++|||||||++|||+||+.||...
T Consensus 160 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~Di~slG~il~~l~~g~~p~~~~ 215 (278)
T 3cok_A 160 TQLKMPHEKHYTLCGTPNYISPEIATRSA---------HGLESDVWSLGCMFYTLLIGRPPFDTD 215 (278)
T ss_dssp EECC-------------------------------------CTHHHHHHHHHHHHHHSSCSSCCC
T ss_pred eeccCCCCcceeccCCCCcCCcchhcCCC---------CCchhhHHHHHHHHHHHHhCCCCCCCh
Confidence 76532 223456889999999876443 468999999999999999999999643
No 120
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=2.2e-35 Score=315.93 Aligned_cols=201 Identities=16% Similarity=0.210 Sum_probs=164.8
Q ss_pred CCCCcc-ceeecCCcceEEEEE-EcCCcEEEEEEeeccccC-HHHHHHHHHHHhhc-CCCCcccceeEEEecCCcEEEEE
Q 004248 534 GDFSDA-NLIKNGHSGDLFRGI-LEGGIPVVIKRIDLQSVK-TEAYLLELDFFSKV-SHARLVPLLGHCMERENEKFLVY 609 (766)
Q Consensus 534 ~~~~~~-~~ig~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~-~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~~lV~ 609 (766)
+.|... ++||+|+||.||+|+ ..+++.||||++...... .+++.+|++++.++ +||||+++++++.+ ++..|+||
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~-~~~~~lv~ 90 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEE-EDRFYLVF 90 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEE-TTEEEEEE
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEee-CCEEEEEE
Confidence 456664 789999999999999 467999999999765433 67899999999995 79999999998876 57899999
Q ss_pred eeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCc---EEeccchh
Q 004248 610 KYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFE---VRLGSLSE 686 (766)
Q Consensus 610 Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~---~kl~DFG~ 686 (766)
||+++|+|.+++.... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++. +||+|||+
T Consensus 91 e~~~~~~L~~~l~~~~-------~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~ 160 (316)
T 2ac3_A 91 EKMRGGSILSHIHKRR-------HFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDL 160 (316)
T ss_dssp ECCTTCBHHHHHHHHS-------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECCTTC
T ss_pred EcCCCCcHHHHHhccC-------CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEEccC
Confidence 9999999999997654 389999999999999999999998 9999999999999998776 99999999
Q ss_pred hhhcCC----------CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 687 VCAQGG----------DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 687 a~~~~~----------~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
++.... ......+|..|+|||.......+... ++.++|||||||++|||+||+.||...
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~----~~~~~DiwslG~il~~l~~g~~pf~~~ 229 (316)
T 2ac3_A 161 GSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASI----YDKRCDLWSLGVILYILLSGYPPFVGR 229 (316)
T ss_dssp CC-------------------CCSGGGCCHHHHHHTSHHHHH----HTTTHHHHHHHHHHHHHHHSSCSCCCC
T ss_pred ccccccCCccccccccccccccCCcCccChHHhhcccccccC----CCcccccHhHHHHHHHHHHCCCCCccc
Confidence 875421 11234589999999987532111111 578999999999999999999999644
No 121
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=1.5e-35 Score=321.03 Aligned_cols=205 Identities=20% Similarity=0.254 Sum_probs=169.7
Q ss_pred HhCCCCccceeecCCcceEEEEEEc------CCcEEEEEEeeccccC--HHHHHHHHHHHhhcCCCCcccceeEEEecCC
Q 004248 532 ATGDFSDANLIKNGHSGDLFRGILE------GGIPVVIKRIDLQSVK--TEAYLLELDFFSKVSHARLVPLLGHCMEREN 603 (766)
Q Consensus 532 ~~~~~~~~~~ig~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~--~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~ 603 (766)
..++|+..+.||+|+||.||+|+.. +++.||||.++..... .++|.+|++++++++||||+++++++.. ++
T Consensus 45 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~ 123 (343)
T 1luf_A 45 PRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAV-GK 123 (343)
T ss_dssp CGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS-SS
T ss_pred cHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc-CC
Confidence 4567999999999999999999964 3589999999754322 5679999999999999999999998765 56
Q ss_pred cEEEEEeeCCCCChhhhhhccCCCC-----------------CcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCC
Q 004248 604 EKFLVYKYMPNGDLSSSLYRKTNTE-----------------DDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDV 666 (766)
Q Consensus 604 ~~~lV~Ey~~~GsL~~~l~~~~~~~-----------------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDl 666 (766)
..++||||+++|+|.+++....... .....+++.+++.++.||++||+|||++ +|+||||
T Consensus 124 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dl 200 (343)
T 1luf_A 124 PMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDL 200 (343)
T ss_dssp SCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCC
T ss_pred ceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCC
Confidence 8999999999999999997642100 0114599999999999999999999998 9999999
Q ss_pred CCCCeeeCCCCcEEeccchhhhhcCC-----CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc
Q 004248 667 QASSILLDDKFEVRLGSLSEVCAQGG-----DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF 741 (766)
Q Consensus 667 Kp~NILl~~~~~~kl~DFG~a~~~~~-----~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt 741 (766)
||+||+++.++.+||+|||+++.... ......+|..|+|||...... ++.++|||||||++|||+|
T Consensus 201 kp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~---------~~~~~Di~slG~il~el~t 271 (343)
T 1luf_A 201 ATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNR---------YTTESDVWAYGVVLWEIFS 271 (343)
T ss_dssp SGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCC---------CCHHHHHHHHHHHHHHHHT
T ss_pred CcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCC---------cCcccccHHHHHHHHHHHh
Confidence 99999999999999999999976522 123345688899999875433 4789999999999999999
Q ss_pred -CCCCCCCC
Q 004248 742 -NNHLNLSS 749 (766)
Q Consensus 742 -G~~p~~~~ 749 (766)
|+.||...
T Consensus 272 ~g~~p~~~~ 280 (343)
T 1luf_A 272 YGLQPYYGM 280 (343)
T ss_dssp TTCCTTTTS
T ss_pred cCCCcCCCC
Confidence 99999543
No 122
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=4.4e-35 Score=308.51 Aligned_cols=197 Identities=17% Similarity=0.212 Sum_probs=170.1
Q ss_pred hCCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC---HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEE
Q 004248 533 TGDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK---TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLV 608 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~---~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV 608 (766)
.++|+..+.||+|+||.||+|.. .+|+.||+|++...... .+++.+|++++++++||||+++++++.. ++..++|
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~~v 83 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE-ESFHYLV 83 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEC-SSEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEc-CCEEEEE
Confidence 46789999999999999999995 56899999999765433 4578899999999999999999998765 5678999
Q ss_pred EeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCc---EEeccch
Q 004248 609 YKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFE---VRLGSLS 685 (766)
Q Consensus 609 ~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~---~kl~DFG 685 (766)
|||+++|+|.+.+.... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++. +||+|||
T Consensus 84 ~e~~~~~~l~~~~~~~~-------~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~Dfg 153 (284)
T 3kk8_A 84 FDLVTGGELFEDIVARE-------FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFG 153 (284)
T ss_dssp ECCCCSCBHHHHHHHHS-------SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEECCCT
T ss_pred EecCCCCCHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEeece
Confidence 99999999999987654 389999999999999999999998 9999999999999987655 9999999
Q ss_pred hhhhcCCC--CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 686 EVCAQGGD--AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 686 ~a~~~~~~--~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
.+...... .....+|+.|+|||...... ++.++||||+||++|||++|+.||...
T Consensus 154 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~Di~slG~~l~~l~~g~~pf~~~ 210 (284)
T 3kk8_A 154 LAIEVNDSEAWHGFAGTPGYLSPEVLKKDP---------YSKPVDIWACGVILYILLVGYPPFWDE 210 (284)
T ss_dssp TCEECCSSCBCCCSCSCGGGCCHHHHTTCC---------BCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred eeEEcccCccccCCCCCcCCcCchhhcCCC---------CCcccchHHHHHHHHHHHHCCCCCCCC
Confidence 99766432 23457899999999876543 478999999999999999999999543
No 123
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.6e-35 Score=315.98 Aligned_cols=197 Identities=20% Similarity=0.332 Sum_probs=160.3
Q ss_pred CCCCccceeecCCcceEEEEEEcCCcEEEEEEeeccccCHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEeeCC
Q 004248 534 GDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMP 613 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey~~ 613 (766)
++|+..+.||+|+||.||+|+.. ++.||||++.... ..+.|.+|++++++++|||||++++++. +..++||||++
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~-~~~~~~~E~~~l~~l~hp~iv~~~~~~~---~~~~lv~e~~~ 82 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESES-ERKAFIVELRQLSRVNHPNIVKLYGACL---NPVCLVMEYAE 82 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSSTT-HHHHHHHHHHHHHHCCCTTBCCEEEBCT---TTTEEEEECCT
T ss_pred hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecChh-HHHHHHHHHHHHhcCCCCCcCeEEEEEc---CCcEEEEEcCC
Confidence 45778899999999999999875 6889999986432 3567999999999999999999999764 35899999999
Q ss_pred CCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCc-EEeccchhhhhcCC
Q 004248 614 NGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFE-VRLGSLSEVCAQGG 692 (766)
Q Consensus 614 ~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~-~kl~DFG~a~~~~~ 692 (766)
+|+|.+++..... ...+++..+..++.|+++||+|||+.+..+|+||||||+||+++.++. +||+|||+++....
T Consensus 83 ~~~L~~~l~~~~~----~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~ 158 (307)
T 2eva_A 83 GGSLYNVLHGAEP----LPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQT 158 (307)
T ss_dssp TCBHHHHHHCSSS----EECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC------
T ss_pred CCCHHHHHhccCC----CCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEccccccccccc
Confidence 9999999975432 134789999999999999999999943348999999999999998886 79999999987655
Q ss_pred CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 693 DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 693 ~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
......+|..|+|||...... ++.++|||||||++|||+||+.||..
T Consensus 159 ~~~~~~gt~~y~aPE~~~~~~---------~~~~~Di~slG~il~el~~g~~p~~~ 205 (307)
T 2eva_A 159 HMTNNKGSAAWMAPEVFEGSN---------YSEKCDVFSWGIILWEVITRRKPFDE 205 (307)
T ss_dssp ------CCTTSSCHHHHTCCC---------CCTHHHHHHHHHHHHHHHHTCCTTTT
T ss_pred ccccCCCCCceEChhhhCCCC---------CCcHHHHHHHHHHHHHHHHCCCCchh
Confidence 555567899999999876543 57899999999999999999999964
No 124
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=6.7e-36 Score=316.81 Aligned_cols=196 Identities=17% Similarity=0.321 Sum_probs=164.4
Q ss_pred CCCCccceeecCCcceEEEEEE-----cCCcEEEEEEeeccccC-HHHHHHHHHHHhhcCCCCcccceeEEEec-CCcEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-----EGGIPVVIKRIDLQSVK-TEAYLLELDFFSKVSHARLVPLLGHCMER-ENEKF 606 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-----~~g~~vavK~l~~~~~~-~~~~~~E~~~l~~l~H~niv~l~~~~~~~-~~~~~ 606 (766)
++|+..+.||+|+||.||+|+. .+++.||||++...... .++|.+|++++++++||||+++++++... ....+
T Consensus 10 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 89 (295)
T 3ugc_A 10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK 89 (295)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCE
T ss_pred HHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceE
Confidence 4688899999999999999984 36899999999754433 56799999999999999999999987642 24589
Q ss_pred EEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchh
Q 004248 607 LVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSE 686 (766)
Q Consensus 607 lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~ 686 (766)
+||||+++|+|.+++.... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 90 lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~ 160 (295)
T 3ugc_A 90 LIMEYLPYGSLRDYLQKHK------ERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGL 160 (295)
T ss_dssp EEEECCTTCBHHHHHHHCG------GGCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCS
T ss_pred EEEEeCCCCCHHHHHHhcc------cccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEccCcc
Confidence 9999999999999997643 2489999999999999999999998 999999999999999999999999999
Q ss_pred hhhcCCC------CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCC
Q 004248 687 VCAQGGD------AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNL 747 (766)
Q Consensus 687 a~~~~~~------~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~ 747 (766)
++..... .....++..|+|||...... ++.++|||||||++|||+||+.|+.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~Di~slG~~l~~l~~g~~~~~ 218 (295)
T 3ugc_A 161 TKVLPQDKEFFKVKEPGESPIFWYAPESLTESK---------FSVASDVWSFGVVLYELFTYIEKSK 218 (295)
T ss_dssp CC-------------CTTCGGGGCCHHHHHHCC---------CCHHHHHHHHHHHHHHHHHTTCTTC
T ss_pred cccccCCcceeeeccCCCCccceeCcHHhcCCC---------CChHHHHHHHHHHHHHHHhcccccC
Confidence 9865322 12234567799999875443 4789999999999999999999874
No 125
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=9.2e-36 Score=335.30 Aligned_cols=197 Identities=20% Similarity=0.313 Sum_probs=166.8
Q ss_pred hCCCCccceeecCCcceEEEEEEcCCcEEEEEEeeccccCHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEeeC
Q 004248 533 TGDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYM 612 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey~ 612 (766)
.++|...+.||+|+||.||+|...++..||||+++......++|.+|+++|++++|||||++++++.+ +..++|||||
T Consensus 183 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~~iv~e~~ 260 (452)
T 1fmk_A 183 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE--EPIYIVTEYM 260 (452)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS--SSCEEEECCC
T ss_pred hhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEcC--CceEEEehhh
Confidence 35678889999999999999998888899999998766667889999999999999999999998754 5789999999
Q ss_pred CCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcCC
Q 004248 613 PNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGG 692 (766)
Q Consensus 613 ~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~~ 692 (766)
++|+|.+++..... ..+++.++..++.||+.||+|||++ +|+||||||+|||+++++.+||+|||+++....
T Consensus 261 ~~gsL~~~l~~~~~-----~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 332 (452)
T 1fmk_A 261 SKGSLLDFLKGETG-----KYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIED 332 (452)
T ss_dssp TTCBHHHHHSHHHH-----TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC----
T ss_pred cCCCHHHHHHhcCC-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCccceecCC
Confidence 99999999975321 2489999999999999999999998 999999999999999999999999999986532
Q ss_pred C----CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCC
Q 004248 693 D----AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLS 748 (766)
Q Consensus 693 ~----~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~ 748 (766)
. .....++..|+|||...... ++.++|||||||++|||+| |+.||..
T Consensus 333 ~~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~sDvwslG~~l~el~t~g~~P~~~ 384 (452)
T 1fmk_A 333 NEYTARQGAKFPIKWTAPEAALYGR---------FTIKSDVWSFGILLTELTTKGRVPYPG 384 (452)
T ss_dssp ----------CCGGGSCHHHHHHCC---------CCHHHHHHHHHHHHHHHHTTTCCSSTT
T ss_pred CceecccCCcccccccCHhHHhcCC---------CCccccHHhHHHHHHHHHhCCCCCCCC
Confidence 2 12234567899999875443 5789999999999999999 9999954
No 126
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=2.5e-35 Score=329.36 Aligned_cols=198 Identities=14% Similarity=0.158 Sum_probs=171.9
Q ss_pred hCCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccCHHHHHHHHHHHhhc------CCCCcccceeEEEecCCcE
Q 004248 533 TGDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVKTEAYLLELDFFSKV------SHARLVPLLGHCMERENEK 605 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l------~H~niv~l~~~~~~~~~~~ 605 (766)
.++|+..++||+|+||.||+|.. .+++.||||++.......+++.+|+++++.+ +|+||+++++++.. .+..
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~-~~~~ 174 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTF-RNHI 174 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEE-TTEE
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCccchHHHHHHHHHHHHHHhhccccCCcCEEEEEeeccc-CCeE
Confidence 35688999999999999999985 5689999999976554456788899998887 57799999998766 5789
Q ss_pred EEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCc--EEecc
Q 004248 606 FLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFE--VRLGS 683 (766)
Q Consensus 606 ~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~--~kl~D 683 (766)
++||||++ |+|.+++..... ..+++..+..++.||+.||+|||+. +||||||||+|||++.++. +||+|
T Consensus 175 ~lv~e~~~-~~L~~~l~~~~~-----~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~vkL~D 245 (429)
T 3kvw_A 175 CMTFELLS-MNLYELIKKNKF-----QGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVID 245 (429)
T ss_dssp EEEECCCC-CBHHHHHHHTTT-----CCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCEEECC
T ss_pred EEEEeccC-CCHHHHHHhccC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcceEEee
Confidence 99999997 699999976543 3489999999999999999999998 9999999999999999987 99999
Q ss_pred chhhhhcCCCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 684 LSEVCAQGGDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 684 FG~a~~~~~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
||+++..........+|+.|+|||.+.... ++.++|||||||++|||+||+.||...
T Consensus 246 FG~a~~~~~~~~~~~gt~~y~aPE~~~~~~---------~~~~~DiwSlG~il~elltG~~pf~~~ 302 (429)
T 3kvw_A 246 FGSSCYEHQRVYTYIQSRFYRAPEVILGAR---------YGMPIDMWSLGCILAELLTGYPLLPGE 302 (429)
T ss_dssp CTTCEETTCCCCSSCSCGGGCCHHHHHTBC---------CCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cccceecCCcccccCCCCCccChHHHhCCC---------CCchHHHHhHHHHHHHHHhCCCCCCCC
Confidence 999987766666778999999999876544 478999999999999999999998543
No 127
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=8.1e-36 Score=320.88 Aligned_cols=197 Identities=19% Similarity=0.263 Sum_probs=162.2
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC--HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEe
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK--TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYK 610 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~--~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~E 610 (766)
++|...+.||+|+||.||+|+. .+++.||||++...... ...+.+|++++++++|||||++++++.. ++..++|||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e 80 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHT-EKSLTLVFE 80 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEEC-SSCEEEEEE
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEee-CCEEEEEec
Confidence 5688899999999999999996 47899999999654332 2246689999999999999999998765 568999999
Q ss_pred eCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhc
Q 004248 611 YMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQ 690 (766)
Q Consensus 611 y~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~ 690 (766)
|++ |+|.+++..... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 81 ~~~-~~l~~~~~~~~~------~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~ 150 (324)
T 3mtl_A 81 YLD-KDLKQYLDDCGN------IINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAK 150 (324)
T ss_dssp CCS-EEHHHHHHHTTT------CCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEEECC
T ss_pred ccc-cCHHHHHHhcCC------CCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCcccccc
Confidence 998 599999876432 489999999999999999999998 9999999999999999999999999999765
Q ss_pred CC---CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 691 GG---DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 691 ~~---~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
.. ......+|..|+|||....... ++.++||||+||++|||+||+.||...
T Consensus 151 ~~~~~~~~~~~~t~~y~aPE~~~~~~~--------~~~~~DiwslG~il~~l~~g~~pf~~~ 204 (324)
T 3mtl_A 151 SIPTKTYDNEVVTLWYRPPDILLGSTD--------YSTQIDMWGVGCIFYEMATGRPLFPGS 204 (324)
T ss_dssp ------------CGGGCCHHHHTTCCC--------CCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred cCCccccccccCcccccChhhhcCCCC--------CCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 32 2234467999999998754322 578999999999999999999999543
No 128
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=1.7e-35 Score=312.34 Aligned_cols=199 Identities=15% Similarity=0.191 Sum_probs=165.6
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeecccc--CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEe
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV--KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYK 610 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~E 610 (766)
++|...+.||+|+||.||+|.. .+++.||+|++..... ..+.+.+|++++++++||||+++++++.+ .+..++|||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~~lv~e 100 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFED-YHNMYIVME 100 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-SSEEEEEEC
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheec-CCeEEEEEE
Confidence 4588899999999999999995 5689999999976543 36789999999999999999999998765 568999999
Q ss_pred eCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeee---CCCCcEEeccchhh
Q 004248 611 YMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILL---DDKFEVRLGSLSEV 687 (766)
Q Consensus 611 y~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl---~~~~~~kl~DFG~a 687 (766)
|+++|+|.+++..... ....+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||++
T Consensus 101 ~~~~~~L~~~l~~~~~---~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a 174 (285)
T 3is5_A 101 TCEGGELLERIVSAQA---RGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLA 174 (285)
T ss_dssp CCSCCBHHHHHHHHHH---HTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECCCCCC
T ss_pred eCCCCcHHHHHHhhhh---cccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEeeecc
Confidence 9999999999864321 113489999999999999999999998 99999999999999 45688999999999
Q ss_pred hhcCC--CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 688 CAQGG--DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 688 ~~~~~--~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
+.... ......+|..|+|||.... . ++.++|||||||++|||++|+.||...
T Consensus 175 ~~~~~~~~~~~~~~t~~y~aPE~~~~-~---------~~~~~Di~slG~il~~ll~g~~pf~~~ 228 (285)
T 3is5_A 175 ELFKSDEHSTNAAGTALYMAPEVFKR-D---------VTFKCDIWSAGVVMYFLLTGCLPFTGT 228 (285)
T ss_dssp CC----------CTTGGGCCHHHHTT-C---------CCHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred eecCCcccCcCcccccCcCChHHhcc-C---------CCcccCeehHHHHHHHHHhCCCCCCCC
Confidence 76532 2344568999999998642 2 478999999999999999999999644
No 129
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=2.1e-35 Score=307.96 Aligned_cols=197 Identities=20% Similarity=0.285 Sum_probs=171.6
Q ss_pred CCCCccceeecCCcceEEEEEEcCCcEEEEEEeeccccCHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEeeCC
Q 004248 534 GDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMP 613 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey~~ 613 (766)
++|+..+.||+|+||.||+|...+++.||+|++.......+++.+|++++++++||||+++++++.+ ++..++||||++
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~~ 86 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE-QAPICLVTEFME 86 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTBCHHHHHHHHHHHHTCCCTTBCCEEEEECS-SSSCEEEECCCT
T ss_pred hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCCCHHHHHHHHHHHHhCCCCCEeeEEEEEcc-CCCeEEEEeCCC
Confidence 4678889999999999999998888999999998776667889999999999999999999998765 567999999999
Q ss_pred CCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcCCC
Q 004248 614 NGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGD 693 (766)
Q Consensus 614 ~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~~~ 693 (766)
+|+|.+++..... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 87 ~~~L~~~~~~~~~------~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~ 157 (267)
T 3t9t_A 87 HGCLSDYLRTQRG------LFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD 157 (267)
T ss_dssp TCBHHHHHHHTTT------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCH
T ss_pred CCcHHHHHhhCcc------cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEcccccccccccc
Confidence 9999999976432 489999999999999999999998 9999999999999999999999999999865321
Q ss_pred ----CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCCC
Q 004248 694 ----AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLSS 749 (766)
Q Consensus 694 ----~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~~ 749 (766)
.....++..|+|||...... ++.++||||+||++|||+| |+.||...
T Consensus 158 ~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~Di~slG~il~~l~~~g~~p~~~~ 209 (267)
T 3t9t_A 158 QYTSSTGTKFPVKWASPEVFSFSR---------YSSKSDVWSFGVLMWEVFSEGKIPYENR 209 (267)
T ss_dssp HHHSTTSTTCCGGGCCHHHHHHCC---------CCHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred cccccccccccccccChhhhcCCC---------ccchhchhhhHHHHHHHhccCCCCCCCC
Confidence 22334677899999875433 4789999999999999999 89998543
No 130
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=5.3e-35 Score=319.33 Aligned_cols=208 Identities=20% Similarity=0.255 Sum_probs=169.6
Q ss_pred ccHHHHHHHhCCCCccceeecCCcceEEEEEEcCCcEEEEEEeeccccC------------HHHHHHHHHHHhhcCCCCc
Q 004248 524 FTYQQLLAATGDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVK------------TEAYLLELDFFSKVSHARL 591 (766)
Q Consensus 524 ~~~~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~------------~~~~~~E~~~l~~l~H~ni 591 (766)
...+++....++|...+.||+|+||.||+|...+|+.||||++...... .+++.+|++++++++||||
T Consensus 12 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i 91 (362)
T 3pg1_A 12 DLIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNI 91 (362)
T ss_dssp HHHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTB
T ss_pred HHHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCc
Confidence 3456788889999999999999999999999888999999998543211 2679999999999999999
Q ss_pred ccceeEEEecC----CcEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCC
Q 004248 592 VPLLGHCMERE----NEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQ 667 (766)
Q Consensus 592 v~l~~~~~~~~----~~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlK 667 (766)
+++++++...+ ...|+||||++ |+|.+++.... ..+++..+..++.|++.||+|||+. +|+|||||
T Consensus 92 v~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlk 161 (362)
T 3pg1_A 92 LGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQR------IVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLH 161 (362)
T ss_dssp CCCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTT------SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCC
T ss_pred cceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcc------cCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCC
Confidence 99999875422 35799999998 69998887543 2489999999999999999999998 99999999
Q ss_pred CCCeeeCCCCcEEeccchhhhhcCC--CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCC
Q 004248 668 ASSILLDDKFEVRLGSLSEVCAQGG--DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHL 745 (766)
Q Consensus 668 p~NILl~~~~~~kl~DFG~a~~~~~--~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p 745 (766)
|+||+++.++.+||+|||+++.... ......+|+.|+|||....... ++.++||||+||++|||+||+.|
T Consensus 162 p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~--------~~~~~DiwslG~il~~l~~g~~p 233 (362)
T 3pg1_A 162 PGNILLADNNDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKG--------FTKLVDMWSAGCVMAEMFNRKAL 233 (362)
T ss_dssp GGGEEECTTCCEEECCTTC---------------CGGGCCHHHHTTCTT--------CCTHHHHHHHHHHHHHHHHSSCS
T ss_pred hHHEEEcCCCCEEEEecCcccccccccccceecccceecCcHHhcCCCC--------CCcHhHHHhHHHHHHHHHhCCCC
Confidence 9999999999999999999975432 2344578899999998754221 57899999999999999999999
Q ss_pred CCCC
Q 004248 746 NLSS 749 (766)
Q Consensus 746 ~~~~ 749 (766)
|...
T Consensus 234 f~~~ 237 (362)
T 3pg1_A 234 FRGS 237 (362)
T ss_dssp CCCS
T ss_pred CCCC
Confidence 9643
No 131
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.2e-35 Score=325.07 Aligned_cols=201 Identities=14% Similarity=0.164 Sum_probs=164.1
Q ss_pred HHhCCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccCHHHHHHHHHHHhhcCCCCcccceeEEEecC-------
Q 004248 531 AATGDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERE------- 602 (766)
Q Consensus 531 ~~~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~------- 602 (766)
...++|...+.||+|+||.||+|+. .+|+.||||++..... ...+|+++|++++|||||++++++....
T Consensus 4 ~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~---~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~ 80 (383)
T 3eb0_A 4 TSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR---YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPP 80 (383)
T ss_dssp --CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT---SCCHHHHHHTTCCCTTBCCEEEEEEEC--------
T ss_pred cccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc---hHHHHHHHHHHcCCCCccchhheeeecCccccccc
Confidence 3567899999999999999999984 6799999999865432 2347999999999999999999875422
Q ss_pred ------------------------------CcEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhh
Q 004248 603 ------------------------------NEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSY 652 (766)
Q Consensus 603 ------------------------------~~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~y 652 (766)
...++|||||+ |+|.+.+..... ....+++..+..++.|+++||+|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~---~~~~l~~~~~~~i~~qi~~aL~~ 156 (383)
T 3eb0_A 81 QPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIR---SGRSIPMNLISIYIYQLFRAVGF 156 (383)
T ss_dssp -----------------------------CCEEEEEECCCS-EEHHHHHHHHHH---TTCCCCHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHH
Confidence 23789999998 588888764211 11358999999999999999999
Q ss_pred hccCCCCCeEecCCCCCCeeeC-CCCcEEeccchhhhhcC--CCCccceeeecccCCCCCCCCceeeeeeeeecccccce
Q 004248 653 LHHECTLPFVHRDVQASSILLD-DKFEVRLGSLSEVCAQG--GDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHI 729 (766)
Q Consensus 653 LH~~~~~~iiHrDlKp~NILl~-~~~~~kl~DFG~a~~~~--~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv 729 (766)
||+. +|+||||||+|||++ .++.+||+|||+|+... .......+|+.|+|||.+.+... ++.++||
T Consensus 157 LH~~---gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~--------~~~~~Di 225 (383)
T 3eb0_A 157 IHSL---GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATE--------YTPSIDL 225 (383)
T ss_dssp HHTT---TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSS--------CCTHHHH
T ss_pred HHHC---cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCC--------CCcchhh
Confidence 9998 999999999999998 68999999999998653 33445678999999998754332 5789999
Q ss_pred ecchHHHHHHhcCCCCCCCC
Q 004248 730 YFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 730 ~s~Gvvl~elltG~~p~~~~ 749 (766)
||+||++|||++|+.||...
T Consensus 226 wslG~il~ell~g~~pf~~~ 245 (383)
T 3eb0_A 226 WSIGCVFGELILGKPLFSGE 245 (383)
T ss_dssp HHHHHHHHHHHHSSCSSCCS
T ss_pred hhHHHHHHHHHhCCCCCCCC
Confidence 99999999999999999543
No 132
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.2e-35 Score=323.60 Aligned_cols=195 Identities=22% Similarity=0.353 Sum_probs=155.7
Q ss_pred CCccceeecCCcceEEEEEEc--CC--cEEEEEEeeccccC--HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEE
Q 004248 536 FSDANLIKNGHSGDLFRGILE--GG--IPVVIKRIDLQSVK--TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVY 609 (766)
Q Consensus 536 ~~~~~~ig~G~~g~Vy~~~~~--~g--~~vavK~l~~~~~~--~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~ 609 (766)
|...++||+|+||.||+|+.. ++ ..||||.++..... .++|.+|++++++++|||||+++++|.+.++..++||
T Consensus 91 ~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~ 170 (373)
T 3c1x_A 91 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL 170 (373)
T ss_dssp EEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEE
T ss_pred eecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEE
Confidence 556789999999999999853 22 46899998653332 5689999999999999999999998876566789999
Q ss_pred eeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhh
Q 004248 610 KYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCA 689 (766)
Q Consensus 610 Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~ 689 (766)
||+++|+|.+++.... ..+++.++..++.||++||+|||+. +|+||||||+|||+++++.+||+|||+++.
T Consensus 171 e~~~~g~L~~~l~~~~------~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG~a~~ 241 (373)
T 3c1x_A 171 PYMKHGDLRNFIRNET------HNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARD 241 (373)
T ss_dssp ECCTTCBHHHHHHCTT------CCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC-----
T ss_pred ECCCCCCHHHHHhhcc------cCCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeecccccc
Confidence 9999999999997543 2488999999999999999999998 999999999999999999999999999986
Q ss_pred cCCC-------CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCC
Q 004248 690 QGGD-------AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLS 748 (766)
Q Consensus 690 ~~~~-------~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~ 748 (766)
.... .....+|..|+|||...... ++.++|||||||++|||+| |++||..
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~DvwSlG~il~ellt~~~~p~~~ 299 (373)
T 3c1x_A 242 MYDKEFDSVHNKTGAKLPVKWMALESLQTQK---------FTTKSDVWSFGVLLWELMTRGAPPYPD 299 (373)
T ss_dssp ----------------CCGGGSCHHHHHHCC---------CCHHHHHHHHHHHHHHHHTTSCCSCTT
T ss_pred ccccccccccccCCCCCcccccChHHhcCCC---------CCcHHHHHHHHHHHHHHHhCcCCCCCC
Confidence 5321 12234567899999875433 5789999999999999999 6666643
No 133
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=5.5e-36 Score=331.43 Aligned_cols=208 Identities=18% Similarity=0.190 Sum_probs=169.9
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeecccc--CHHHHHHHHHHHhhcCCCCcccceeEEEecC-CcEEEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV--KTEAYLLELDFFSKVSHARLVPLLGHCMERE-NEKFLVY 609 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~~~lV~ 609 (766)
++|...++||+|+||.||+|.. .+|+.||||++..... ..+.+.+|++++++++|||||++++++.... ...++||
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~ 88 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEE
Confidence 4588899999999999999995 4589999999975432 2577899999999999999999999876533 3689999
Q ss_pred eeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeee----CCCCcEEeccch
Q 004248 610 KYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILL----DDKFEVRLGSLS 685 (766)
Q Consensus 610 Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl----~~~~~~kl~DFG 685 (766)
|||++|+|.+++..... ...+++.++..++.|++.||+|||+. +|+||||||+|||+ +.++.+||+|||
T Consensus 89 e~~~~g~L~~~l~~~~~----~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG 161 (396)
T 4eut_A 89 EFCPCGSLYTVLEEPSN----AYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFG 161 (396)
T ss_dssp CCCTTEEHHHHTTSGGG----TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECCGG
T ss_pred ecCCCCCHHHHHHhhhc----ccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEecCC
Confidence 99999999999975432 12389999999999999999999998 99999999999999 788889999999
Q ss_pred hhhhcCCC--CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 686 EVCAQGGD--AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 686 ~a~~~~~~--~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
+++..... .....+|..|+|||.+....... .....++.++|||||||++|||+||+.||...
T Consensus 162 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~-~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~ 226 (396)
T 4eut_A 162 AARELEDDEQFVSLYGTEEYLHPDMYERAVLRK-DHQKKYGATVDLWSIGVTFYHAATGSLPFRPF 226 (396)
T ss_dssp GCEECCCGGGSSCSSSCCTTCCHHHHHHHCC---CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECT
T ss_pred CceEccCCCccccccCCccccCHHHhhcccccc-ccccCCCcHHHHHHHHHHHHHHHHCCCCCCCC
Confidence 99876332 33456899999999764311000 00001578999999999999999999999543
No 134
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=1.8e-35 Score=318.35 Aligned_cols=197 Identities=21% Similarity=0.281 Sum_probs=163.1
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcE----EEEEEeecccc--CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIP----VVIKRIDLQSV--KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKF 606 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~----vavK~l~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~ 606 (766)
++|+..++||+|+||.||+|+. .+++. ||+|.+..... ..+++.+|+.++++++|||||++++++. ++..+
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~--~~~~~ 90 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP--GSSLQ 90 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC--BSSEE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCccE
Confidence 4688899999999999999984 44544 88888754332 2356889999999999999999999774 35789
Q ss_pred EEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchh
Q 004248 607 LVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSE 686 (766)
Q Consensus 607 lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~ 686 (766)
+||||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 91 ~v~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~ 161 (325)
T 3kex_A 91 LVTQYLPLGSLLDHVRQHR------GALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGV 161 (325)
T ss_dssp EEEECCTTCBSHHHHHSSG------GGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECSCSG
T ss_pred EEEEeCCCCCHHHHHHHcc------ccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECCCCc
Confidence 9999999999999997543 2489999999999999999999998 999999999999999999999999999
Q ss_pred hhhcCCC-----CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCCCc
Q 004248 687 VCAQGGD-----AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLSSR 750 (766)
Q Consensus 687 a~~~~~~-----~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~~~ 750 (766)
++..... .....++..|+|||...... ++.++|||||||++|||+| |+.||....
T Consensus 162 a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~Di~slG~~l~el~~~g~~p~~~~~ 222 (325)
T 3kex_A 162 ADLLPPDDKQLLYSEAKTPIKWMALESIHFGK---------YTHQSDVWSYGVTVWELMTFGAEPYAGLR 222 (325)
T ss_dssp GGGSCCCTTCCC-----CCTTTSCHHHHHHCC---------CCHHHHHHHHHHHHHHHHTTSCCTTTTSC
T ss_pred ccccCcccccccccCCCCcccccChHHhccCC---------CChhhHhHHhHHHHHHHHhCCCCCccccC
Confidence 9876322 23345677899999875443 4789999999999999999 999996543
No 135
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=1.1e-34 Score=306.73 Aligned_cols=196 Identities=17% Similarity=0.221 Sum_probs=166.3
Q ss_pred CCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC---HHHHHHHHHHHhhcCCCCcccceeEEEec---CCcEEE
Q 004248 535 DFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK---TEAYLLELDFFSKVSHARLVPLLGHCMER---ENEKFL 607 (766)
Q Consensus 535 ~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~---~~~~~~E~~~l~~l~H~niv~l~~~~~~~---~~~~~l 607 (766)
.|...+.||+|+||.||+|.. .++..||+|++...... .+.+.+|++++++++||||+++++++... ....++
T Consensus 27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 106 (290)
T 1t4h_A 27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 106 (290)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEE
T ss_pred eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEE
Confidence 366778899999999999985 56889999999765433 46799999999999999999999987542 345899
Q ss_pred EEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeC-CCCcEEeccchh
Q 004248 608 VYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLD-DKFEVRLGSLSE 686 (766)
Q Consensus 608 V~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~-~~~~~kl~DFG~ 686 (766)
||||+++|+|.+++.+.. .+++..+..++.|++.||+|||+. .++|+||||||+||+++ +++.+||+|||+
T Consensus 107 v~e~~~~~~L~~~l~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~-~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~ 178 (290)
T 1t4h_A 107 VTELMTSGTLKTYLKRFK-------VMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGL 178 (290)
T ss_dssp EEECCCSCBHHHHHHHHS-------SCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCSCCCGGGEEESSTTSCEEECCTTG
T ss_pred EEEecCCCCHHHHHHHcc-------CCCHHHHHHHHHHHHHHHHHHHcC-CCCEEECCCCHHHEEEECCCCCEEEeeCCC
Confidence 999999999999997653 389999999999999999999997 12399999999999998 789999999999
Q ss_pred hhhcCCC-CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 687 VCAQGGD-AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 687 a~~~~~~-~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
+...... .....+|+.|+|||.... . ++.++||||+||++|||+||+.||..
T Consensus 179 ~~~~~~~~~~~~~~t~~y~aPE~~~~-~---------~~~~~Di~slG~~l~~l~~g~~pf~~ 231 (290)
T 1t4h_A 179 ATLKRASFAKAVIGTPEFMAPEMYEE-K---------YDESVDVYAFGMCMLEMATSEYPYSE 231 (290)
T ss_dssp GGGCCTTSBEESCSSCCCCCGGGGGT-C---------CCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred cccccccccccccCCcCcCCHHHHhc-c---------CCCcchHHHHHHHHHHHHhCCCCCCC
Confidence 9766433 344568999999997642 1 47899999999999999999999954
No 136
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=2e-35 Score=323.13 Aligned_cols=197 Identities=14% Similarity=0.123 Sum_probs=162.8
Q ss_pred hCCCCccceeecCCcceEEEEEEcC------CcEEEEEEeeccccC------------HHHHHHHHHHHhhcCCCCcccc
Q 004248 533 TGDFSDANLIKNGHSGDLFRGILEG------GIPVVIKRIDLQSVK------------TEAYLLELDFFSKVSHARLVPL 594 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~~~~------g~~vavK~l~~~~~~------------~~~~~~E~~~l~~l~H~niv~l 594 (766)
.++|...+.||+|+||.||+|.... ++.||||++...... ...+.+|+..++.++||||+++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~ 113 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY 113 (364)
T ss_dssp CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence 4578999999999999999998644 478999998754321 1235567777888899999999
Q ss_pred eeEEEecC---CcEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCe
Q 004248 595 LGHCMERE---NEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSI 671 (766)
Q Consensus 595 ~~~~~~~~---~~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NI 671 (766)
++++.... ...|+||||| +|+|.+++.... ..++|.++..++.||+.||+|||+. +|+||||||+||
T Consensus 114 ~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~------~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Ni 183 (364)
T 3op5_A 114 WGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANA------KRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNL 183 (364)
T ss_dssp EEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTT------SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGE
T ss_pred EeeeeeccCCcceEEEEEeCC-CCCHHHHHHhcc------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHE
Confidence 99886532 3479999999 999999997643 2499999999999999999999998 999999999999
Q ss_pred eeC--CCCcEEeccchhhhhcCCC----------CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHH
Q 004248 672 LLD--DKFEVRLGSLSEVCAQGGD----------AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSA 739 (766)
Q Consensus 672 Ll~--~~~~~kl~DFG~a~~~~~~----------~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~el 739 (766)
|++ .++.+||+|||+++..... .....||..|+|||...... ++.++|||||||++|||
T Consensus 184 ll~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---------~~~~~Di~slG~~l~el 254 (364)
T 3op5_A 184 LLNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVA---------PSRRGDLEILGYCMIQW 254 (364)
T ss_dssp EEESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCC---------CCHHHHHHHHHHHHHHH
T ss_pred EEecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCC---------CCchhhHHHHHHHHHHH
Confidence 999 8899999999999764211 12345899999999876544 47899999999999999
Q ss_pred hcCCCCCCC
Q 004248 740 IFNNHLNLS 748 (766)
Q Consensus 740 ltG~~p~~~ 748 (766)
+||+.||..
T Consensus 255 ~~g~~Pf~~ 263 (364)
T 3op5_A 255 LTGHLPWED 263 (364)
T ss_dssp HHSCCTTGG
T ss_pred HhCCCCccc
Confidence 999999963
No 137
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=2e-35 Score=322.54 Aligned_cols=198 Identities=20% Similarity=0.244 Sum_probs=169.1
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC--HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEe
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK--TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYK 610 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~--~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~E 610 (766)
++|+..+.||+|+||.||+|.. .+++.||+|++...... .+.+.+|++++++++||||+++++++.. ++..++|||
T Consensus 33 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e 111 (360)
T 3eqc_A 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS-DGEISICME 111 (360)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEE-TTEEEEEEC
T ss_pred ccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEE-CCEEEEEEE
Confidence 4688899999999999999995 47899999999765322 5679999999999999999999998876 568999999
Q ss_pred eCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhc
Q 004248 611 YMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQ 690 (766)
Q Consensus 611 y~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~ 690 (766)
|+++|+|.+++.+.+ .+++..+..++.|++.||+|||+. .+|+||||||+||+++.++.+||+|||+++..
T Consensus 112 ~~~~~~L~~~l~~~~-------~~~~~~~~~i~~~i~~~l~~lh~~--~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 182 (360)
T 3eqc_A 112 HMDGGSLDQVLKKAG-------RIPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL 182 (360)
T ss_dssp CCTTCBHHHHHHHHS-------SCCHHHHHHHHHHHHHHHHHHHHH--HCCCCSCCSGGGEEECTTCCEEECCCCCCHHH
T ss_pred CCCCCCHHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHHh--CCEEcCCccHHHEEECCCCCEEEEECCCCccc
Confidence 999999999997654 389999999999999999999973 17999999999999999999999999998754
Q ss_pred C-CCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCCc
Q 004248 691 G-GDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSSR 750 (766)
Q Consensus 691 ~-~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~~ 750 (766)
. .......+|+.|+|||...... ++.++|||||||++|||+||+.||....
T Consensus 183 ~~~~~~~~~gt~~y~aPE~~~~~~---------~~~~~Di~slG~il~~l~~g~~pf~~~~ 234 (360)
T 3eqc_A 183 IDSMANSFVGTRSYMSPERLQGTH---------YSVQSDIWSMGLSLVEMAVGRYPIPPPD 234 (360)
T ss_dssp HHHC----CCCCTTCCHHHHTTCC---------CSHHHHHHHHHHHHHHHHHTSCCSSCCC
T ss_pred ccccccCCCCCCCeECHHHHcCCC---------CCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 2 2334457899999999876543 4789999999999999999999996433
No 138
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=5e-35 Score=308.30 Aligned_cols=196 Identities=15% Similarity=0.211 Sum_probs=170.2
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeecccc----CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV----KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLV 608 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~----~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV 608 (766)
++|+..+.||+|+||.||+|+. .+++.||||.+..... ..+.+.+|++++++++||||+++++++.+ ++..++|
T Consensus 14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv 92 (284)
T 2vgo_A 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHD-RKRIYLM 92 (284)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-SSEEEEE
T ss_pred hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEc-CCEEEEE
Confidence 4688899999999999999995 4688999999965422 25679999999999999999999998765 5689999
Q ss_pred EeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhh
Q 004248 609 YKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVC 688 (766)
Q Consensus 609 ~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~ 688 (766)
|||+++|+|.+++...+ .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 93 ~e~~~~~~L~~~l~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~ 162 (284)
T 2vgo_A 93 LEFAPRGELYKELQKHG-------RFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSV 162 (284)
T ss_dssp ECCCTTEEHHHHHHHHS-------SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCCTTCE
T ss_pred EEeCCCCcHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecccccc
Confidence 99999999999997653 389999999999999999999998 99999999999999999999999999987
Q ss_pred hcCC-CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 689 AQGG-DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 689 ~~~~-~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
.... ......++..|+|||...... ++.++|||||||++|||++|+.||...
T Consensus 163 ~~~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~Di~slG~il~~l~~g~~pf~~~ 215 (284)
T 2vgo_A 163 HAPSLRRRTMCGTLDYLPPEMIEGKT---------HDEKVDLWCAGVLCYEFLVGMPPFDSP 215 (284)
T ss_dssp ECSSSCBCCCCSCGGGCCHHHHTTCC---------BCTTHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred cCcccccccccCCCCcCCHHHhccCC---------CCcccchhhHHHHHHHHHHCCCCCCCC
Confidence 6532 234456899999999876543 478999999999999999999999643
No 139
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=9.8e-35 Score=340.81 Aligned_cols=284 Identities=20% Similarity=0.301 Sum_probs=256.1
Q ss_pred hhhhccCCCCCEEecCCCCCCCC-----------------Cchhhh--hCCCCCCEEEccCCCCCccCCcccCCCCCCcE
Q 004248 110 ADALVNLTHLASFNASRFLLPGS-----------------IPDWLG--QQLPTLQALDLRSCSISGVIPFSLGNLTNLTS 170 (766)
Q Consensus 110 ~~~l~~l~~L~~L~ls~n~l~g~-----------------ip~~~~--~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~ 170 (766)
+..+.++++|++|++++|.+.|. +|+.++ . +++|++|+|++|.+.+.+|..|+++++|++
T Consensus 199 p~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~-l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~ 277 (636)
T 4eco_A 199 SKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDN-LKDLTDVEVYNCPNLTKLPTFLKALPEMQL 277 (636)
T ss_dssp CGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGG-CTTCCEEEEECCTTCSSCCTTTTTCSSCCE
T ss_pred CHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcc-cCCCCEEEecCCcCCccChHHHhcCCCCCE
Confidence 45789999999999999999996 999987 6 999999999999999999999999999999
Q ss_pred EEeecCc-CCC-CCCccccCC------CCCCEEEccCCCCCCCCCc--ccCCCCCCCEEeccCCcCCCCCCCCCCCCCCc
Q 004248 171 LYLSDNG-LTG-TIPSSLGQL------SVLSVLDLSRNSLTGNIPT--SFGLLKNLSSLDISSNYLTGSIPPGLGTLSKL 240 (766)
Q Consensus 171 L~Ls~N~-l~~-~~p~~l~~L------~~L~~L~Ls~N~l~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L 240 (766)
|+|++|+ ++| .+|..++++ ++|++|+|++|+++ .+|. .|+++++|+.|+|++|.++|.+| .++.+++|
T Consensus 278 L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L 355 (636)
T 4eco_A 278 INVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKL 355 (636)
T ss_dssp EECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEE
T ss_pred EECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCC
Confidence 9999998 998 899998887 99999999999999 8998 99999999999999999999999 89999999
Q ss_pred cEEEccCCCCCCCCccccCCCCC-CCEEEccCCcCCccCCcccCCCC--CCCEEEccCccCccccCCCccC-------CC
Q 004248 241 QYLNVSNNSLASSIPAQLGDLDS-LVDLDLSMNSLSGSVPSELRGLR--SLQKFVIGNNFLSGNLSVNLFP-------TV 310 (766)
Q Consensus 241 ~~L~Ls~N~l~~~~p~~l~~l~~-L~~L~Ls~N~l~g~~p~~l~~l~--~L~~L~ls~N~l~g~~~~~~~~-------~l 310 (766)
++|+|++|+++ .+|..++++++ |++|++++|+++ .+|..+..++ +|+.|++++|.+++.+|..+ + .+
T Consensus 356 ~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l-~~~~~~~~~~ 432 (636)
T 4eco_A 356 ASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNF-DPLDPTPFKG 432 (636)
T ss_dssp SEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSS-CTTCSSCCCC
T ss_pred CEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhh-cccccccccC
Confidence 99999999998 78989999999 999999999999 7898887765 89999999999998887654 4 67
Q ss_pred CcccEEEccCCCCCCCCCcccCCCCCCCEEEccCCCCCCCCCcccccCCC-------CCcEEEccCCcCccCCCc-----
Q 004248 311 SQLQIIVLRQNGFTGPPPDVLWSMPQLRLLDISRNNFTGPLPNSRSNVNT-------STVELNISQNMFYGGLTP----- 378 (766)
Q Consensus 311 ~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~-------~l~~L~ls~N~l~g~~~~----- 378 (766)
.+|+.|+|++|+++..++..+..+++|++|+|++|+++ .+|...+.... +|+.|++++|.++ .+|.
T Consensus 433 ~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~ 510 (636)
T 4eco_A 433 INVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLT-EIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRAT 510 (636)
T ss_dssp CCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCS-BCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTT
T ss_pred CCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCC-CcCHHHhccccccccccCCccEEECcCCcCC-ccChhhhhc
Confidence 79999999999999777777778999999999999999 77765544333 8999999999998 6764
Q ss_pred CCCCCCEEeccCCcCccccChhhh
Q 004248 379 VLGRFRLVDLSGNYFEGRVPEYVH 402 (766)
Q Consensus 379 ~l~~l~~ldLs~N~l~g~~p~~~~ 402 (766)
.+++|+.|||++|++++ +|..+.
T Consensus 511 ~l~~L~~L~Ls~N~l~~-ip~~~~ 533 (636)
T 4eco_A 511 TLPYLVGIDLSYNSFSK-FPTQPL 533 (636)
T ss_dssp TCTTCCEEECCSSCCSS-CCCGGG
T ss_pred cCCCcCEEECCCCCCCC-cChhhh
Confidence 46789999999999998 887764
No 140
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=2.7e-35 Score=309.45 Aligned_cols=196 Identities=19% Similarity=0.353 Sum_probs=169.4
Q ss_pred CCCCccceeecCCcceEEEEEEcCCcEEEEEEeeccccCHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEeeCC
Q 004248 534 GDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMP 613 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey~~ 613 (766)
++|+..+.||+|+||.||+|...++..||||++.......+.+.+|++++++++||||+++++++. ++..++||||++
T Consensus 13 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~--~~~~~~v~e~~~ 90 (279)
T 1qpc_A 13 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT--QEPIYIITEYME 90 (279)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEEC--SSSCEEEEECCT
T ss_pred HhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCcccHHHHHHHHHHHHhCCCcCcceEEEEEc--CCCcEEEEecCC
Confidence 568889999999999999999888889999999876666788999999999999999999999765 356899999999
Q ss_pred CCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcCCC
Q 004248 614 NGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGD 693 (766)
Q Consensus 614 ~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~~~ 693 (766)
+|+|.+++..... ..+++.++..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.....
T Consensus 91 ~~~L~~~l~~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 162 (279)
T 1qpc_A 91 NGSLVDFLKTPSG-----IKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDN 162 (279)
T ss_dssp TCBHHHHTTSHHH-----HTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECSSS
T ss_pred CCCHHHHHhcCCC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCcccccccCc
Confidence 9999999965321 2489999999999999999999998 9999999999999999999999999999866432
Q ss_pred C----ccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCC
Q 004248 694 A----HQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLS 748 (766)
Q Consensus 694 ~----~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~ 748 (766)
. ....++..|+|||...... ++.++|||||||++|||+| |+.||..
T Consensus 163 ~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~Di~slG~il~el~~~g~~p~~~ 213 (279)
T 1qpc_A 163 EYTAREGAKFPIKWTAPEAINYGT---------FTIKSDVWSFGILLTEIVTHGRIPYPG 213 (279)
T ss_dssp CEECCTTCCCCTTTSCHHHHHHCE---------ECHHHHHHHHHHHHHHHHTTTCCSSTT
T ss_pred ccccccCCCCccCccChhhhccCC---------CCchhhhHHHHHHHHHHHhCCCCCCcc
Confidence 1 2234567899999875332 5789999999999999999 8999854
No 141
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=2e-35 Score=320.10 Aligned_cols=193 Identities=18% Similarity=0.191 Sum_probs=164.1
Q ss_pred hCCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccCHHHHHHHHHHHhhc-CCCCcccceeEEEecCCcEEEEEe
Q 004248 533 TGDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVKTEAYLLELDFFSKV-SHARLVPLLGHCMERENEKFLVYK 610 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~~lV~E 610 (766)
.++|+..+.||+|+||.||+|.. .+|+.||||.++.... .+.+|++++.++ +|||||++++++.+ ++..|+|||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~---~~~~E~~~l~~~~~hp~iv~~~~~~~~-~~~~~lv~E 96 (342)
T 2qr7_A 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR---DPTEEIEILLRYGQHPNIITLKDVYDD-GKYVYVVTE 96 (342)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC---CCHHHHHHHHHHTTSTTBCCEEEEEEC-SSEEEEEEC
T ss_pred cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC---ChHHHHHHHHHhcCCCCcCeEEEEEEc-CCEEEEEEe
Confidence 35688899999999999999995 5789999999976543 245788999888 79999999997765 578999999
Q ss_pred eCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCC----CcEEeccchh
Q 004248 611 YMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDK----FEVRLGSLSE 686 (766)
Q Consensus 611 y~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~----~~~kl~DFG~ 686 (766)
||++|+|.+++.+.+ .+++.++..++.||+.||+|||+. +|+||||||+|||+.++ +.+||+|||+
T Consensus 97 ~~~gg~L~~~i~~~~-------~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~ 166 (342)
T 2qr7_A 97 LMKGGELLDKILRQK-------FFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGF 166 (342)
T ss_dssp CCCSCBHHHHHHTCT-------TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEECCCTT
T ss_pred CCCCCcHHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEEEECCC
Confidence 999999999997653 389999999999999999999998 99999999999998543 3599999999
Q ss_pred hhhcCC---CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 687 VCAQGG---DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 687 a~~~~~---~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
++.... .....++|+.|+|||.+.... ++.++|||||||++|||++|+.||..
T Consensus 167 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---------~~~~~DiwslG~il~ell~g~~Pf~~ 222 (342)
T 2qr7_A 167 AKQLRAENGLLMTPCYTANFVAPEVLERQG---------YDAACDIWSLGVLLYTMLTGYTPFAN 222 (342)
T ss_dssp CEECBCTTCCBCCSSCCSSCCCHHHHHHHH---------HHHHHHHHHHHHHHHHHHHSSCSSCS
T ss_pred cccCcCCCCceeccCCCccccCHHHhcCCC---------CCCccCeeeHhHHHHHHhcCCCCCCC
Confidence 986532 234557899999999875432 47899999999999999999999964
No 142
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=5.3e-35 Score=318.02 Aligned_cols=198 Identities=17% Similarity=0.275 Sum_probs=167.2
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC---HHHHHHHHHHHhhcCCCCcccceeEEEec-------C
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK---TEAYLLELDFFSKVSHARLVPLLGHCMER-------E 602 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~---~~~~~~E~~~l~~l~H~niv~l~~~~~~~-------~ 602 (766)
++|+..+.||+|+||.||+|+. .+|+.||||++...... ...+.+|++++++++||||+++++++... .
T Consensus 17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 96 (351)
T 3mi9_A 17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK 96 (351)
T ss_dssp GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------
T ss_pred cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCC
Confidence 5688999999999999999996 67999999998654332 46789999999999999999999988653 2
Q ss_pred CcEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEec
Q 004248 603 NEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLG 682 (766)
Q Consensus 603 ~~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~ 682 (766)
+..|+||||+++ +|.+.+.... ..+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+
T Consensus 97 ~~~~lv~e~~~~-~l~~~l~~~~------~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~ 166 (351)
T 3mi9_A 97 GSIYLVFDFCEH-DLAGLLSNVL------VKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLA 166 (351)
T ss_dssp CEEEEEEECCSE-EHHHHHHCTT------SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEEC
T ss_pred ceEEEEEeccCC-CHHHHHhhcc------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEc
Confidence 368999999985 8888876543 2489999999999999999999998 99999999999999999999999
Q ss_pred cchhhhhcC-------CCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 683 SLSEVCAQG-------GDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 683 DFG~a~~~~-------~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
|||+++... .......+|+.|+|||.+..... ++.++|||||||++|||+||+.||...
T Consensus 167 Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~--------~~~~~DiwslG~il~ell~g~~pf~~~ 232 (351)
T 3mi9_A 167 DFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERD--------YGPPIDLWGAGCIMAEMWTRSPIMQGN 232 (351)
T ss_dssp CCTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCS--------CCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred cchhcccccccccccccccCCcccccCccCchhhcCCCC--------CCcHhHHHHHHHHHHHHHhCCCCCCCC
Confidence 999997653 12234567999999998754321 478999999999999999999998543
No 143
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=3.9e-35 Score=316.49 Aligned_cols=197 Identities=18% Similarity=0.265 Sum_probs=165.4
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC---HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK---TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVY 609 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~---~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~ 609 (766)
++|+..+.||+|+||.||+|+. .+|+.||||++...... .+.+.+|++++++++||||+++++++.. ++..++||
T Consensus 25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~ 103 (331)
T 4aaa_A 25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKK-KKRWYLVF 103 (331)
T ss_dssp GGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-TTEEEEEE
T ss_pred hhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeec-CCEEEEEE
Confidence 5688899999999999999995 46899999998654433 4568899999999999999999998876 56899999
Q ss_pred eeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhh
Q 004248 610 KYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCA 689 (766)
Q Consensus 610 Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~ 689 (766)
||+++++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 104 e~~~~~~l~~~~~~~~-------~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~ 173 (331)
T 4aaa_A 104 EFVDHTILDDLELFPN-------GLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFART 173 (331)
T ss_dssp ECCSEEHHHHHHHSTT-------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCTTC--
T ss_pred ecCCcchHHHHHhhcc-------CCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCCCcee
Confidence 9999999988876443 389999999999999999999998 999999999999999999999999999976
Q ss_pred cCC---CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 690 QGG---DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 690 ~~~---~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
... ......+|..|+|||....... ++.++||||+||++|||+||+.||...
T Consensus 174 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~--------~~~~~Di~slG~il~~l~~g~~pf~~~ 228 (331)
T 4aaa_A 174 LAAPGEVYDDEVATRWYRAPELLVGDVK--------YGKAVDVWAIGCLVTEMFMGEPLFPGD 228 (331)
T ss_dssp ----------CCCCCTTCCHHHHTTCTT--------CCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ecCCccccCCCcCCccccCcccccCCCC--------cchHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 532 2334568999999998754321 578999999999999999999999544
No 144
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.3e-35 Score=319.96 Aligned_cols=202 Identities=19% Similarity=0.184 Sum_probs=164.2
Q ss_pred CCCCccceeecCCcceEEEEEEcCCcEEEEEEeeccccC---HHHHHHHHHHHhhcCC--CCcccceeEEEecCCcEEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVK---TEAYLLELDFFSKVSH--ARLVPLLGHCMERENEKFLV 608 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~---~~~~~~E~~~l~~l~H--~niv~l~~~~~~~~~~~~lV 608 (766)
++|+..+.||+|+||.||+|...+++.||||++...... .+.+.+|++++++++| |||+++++++.. ++..|+|
T Consensus 9 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~-~~~~~lv 87 (343)
T 3dbq_A 9 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEIT-DQYIYMV 87 (343)
T ss_dssp CEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-SSEEEEE
T ss_pred CEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEee-CCEEEEE
Confidence 458889999999999999999888999999999765433 4678999999999986 999999998765 5689999
Q ss_pred EeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhh
Q 004248 609 YKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVC 688 (766)
Q Consensus 609 ~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~ 688 (766)
||| .+|+|.+++.... .+++.++..++.|++.||+|||+. +|+||||||+|||++ ++.+||+|||+++
T Consensus 88 ~e~-~~~~L~~~l~~~~-------~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~DFG~a~ 155 (343)
T 3dbq_A 88 MEC-GNIDLNSWLKKKK-------SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIAN 155 (343)
T ss_dssp ECC-CSEEHHHHHHHSC-------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSC
T ss_pred EeC-CCCCHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEeeccccc
Confidence 995 5789999998654 389999999999999999999998 999999999999997 6789999999998
Q ss_pred hcCCC-----CccceeeecccCCCCCCCCceeeee--eeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 689 AQGGD-----AHQSRITRLLRLPQSSEQGSSGMVI--YLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 689 ~~~~~-----~~~~~~t~~y~aPe~~~~~~~g~~~--~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
..... .....||+.|+|||.+......... -...++.++|||||||++|||+||+.||..
T Consensus 156 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 222 (343)
T 3dbq_A 156 QMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ 222 (343)
T ss_dssp CC------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred ccCcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchh
Confidence 66322 2245689999999976431110000 001268899999999999999999999954
No 145
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=6.9e-35 Score=310.47 Aligned_cols=196 Identities=14% Similarity=0.161 Sum_probs=168.1
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeecccc-CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEee
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV-KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKY 611 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey 611 (766)
++|...+.||+|+||.||+|+. .+|+.||||++..... ..+.+.+|++++++++||||+++++++.+ .+..++||||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~ 87 (304)
T 2jam_A 9 KTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYES-TTHYYLVMQL 87 (304)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEEC-SSEEEEEECC
T ss_pred ccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhccc-CCEEEEEEEc
Confidence 4688899999999999999995 4799999999976543 25678999999999999999999998765 5689999999
Q ss_pred CCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeee---CCCCcEEeccchhhh
Q 004248 612 MPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILL---DDKFEVRLGSLSEVC 688 (766)
Q Consensus 612 ~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl---~~~~~~kl~DFG~a~ 688 (766)
+++|+|.+++...+ .+++.++..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+++
T Consensus 88 ~~~~~L~~~l~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~ 157 (304)
T 2jam_A 88 VSGGELFDRILERG-------VYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSK 157 (304)
T ss_dssp CCSCBHHHHHHHHS-------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSCSTTC
T ss_pred CCCccHHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccCCcce
Confidence 99999999997654 389999999999999999999998 99999999999999 788999999999997
Q ss_pred hcCC-CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 689 AQGG-DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 689 ~~~~-~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
.... ......+|..|+|||...... ++.++||||+||++|||+||+.||...
T Consensus 158 ~~~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~Di~slG~il~~l~~g~~pf~~~ 210 (304)
T 2jam_A 158 MEQNGIMSTACGTPGYVAPEVLAQKP---------YSKAVDCWSIGVITYILLCGYPPFYEE 210 (304)
T ss_dssp CCCCBTTHHHHSCCCBCCTTTBSSCS---------CCHHHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred ecCCCccccccCCCCccChHHhccCC---------CCchhhHHHHHHHHHHHHHCCCCCCCC
Confidence 6533 233456899999999886543 478999999999999999999999543
No 146
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2e-35 Score=320.32 Aligned_cols=210 Identities=16% Similarity=0.107 Sum_probs=168.2
Q ss_pred HHHHhCCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccc------cCHHHHHHHHHHHhhcCCCCcccceeEEEec
Q 004248 529 LLAATGDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQS------VKTEAYLLELDFFSKVSHARLVPLLGHCMER 601 (766)
Q Consensus 529 l~~~~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~------~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~ 601 (766)
+....++|+..+.||+|+||.||+|.. .+++.||||++.... ...+++.+|++++++++|||||++++++.+
T Consensus 21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~- 99 (345)
T 3hko_A 21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYED- 99 (345)
T ss_dssp HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEEC-
T ss_pred hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhcc-
Confidence 344567799999999999999999995 578899999996542 125689999999999999999999998865
Q ss_pred CCcEEEEEeeCCCCChhhhhhccCCCC---------------------------------CcCCCCCHHHHHHHHHHHHH
Q 004248 602 ENEKFLVYKYMPNGDLSSSLYRKTNTE---------------------------------DDLQSLDWITRLKIAIGAAE 648 (766)
Q Consensus 602 ~~~~~lV~Ey~~~GsL~~~l~~~~~~~---------------------------------~~~~~l~~~~~~~i~~~ia~ 648 (766)
++..++|||||++|+|.+++....... .....+++..+..++.|++.
T Consensus 100 ~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~ 179 (345)
T 3hko_A 100 EQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFS 179 (345)
T ss_dssp SSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHH
Confidence 568999999999999999985311000 00112467778899999999
Q ss_pred HhhhhccCCCCCeEecCCCCCCeeeCCCC--cEEeccchhhhhcCC-------CCccceeeecccCCCCCCCCceeeeee
Q 004248 649 GLSYLHHECTLPFVHRDVQASSILLDDKF--EVRLGSLSEVCAQGG-------DAHQSRITRLLRLPQSSEQGSSGMVIY 719 (766)
Q Consensus 649 gL~yLH~~~~~~iiHrDlKp~NILl~~~~--~~kl~DFG~a~~~~~-------~~~~~~~t~~y~aPe~~~~~~~g~~~~ 719 (766)
||+|||+. +|+||||||+||+++.++ .+||+|||+++.... ......+|+.|+|||.+......
T Consensus 180 ~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~---- 252 (345)
T 3hko_A 180 ALHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNES---- 252 (345)
T ss_dssp HHHHHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSC----
T ss_pred HHHHHHHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCC----
Confidence 99999998 999999999999998776 899999999975421 12345689999999987542211
Q ss_pred eeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 720 LFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 720 ~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
++.++|||||||++|||+||+.||...
T Consensus 253 ---~~~~~DiwslG~il~el~~g~~pf~~~ 279 (345)
T 3hko_A 253 ---YGPKCDAWSAGVLLHLLLMGAVPFPGV 279 (345)
T ss_dssp ---CCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ---CCcHHHHHHHHHHHHHHHHCCCCCCCC
Confidence 578999999999999999999999543
No 147
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=4.8e-35 Score=322.26 Aligned_cols=203 Identities=14% Similarity=0.246 Sum_probs=169.4
Q ss_pred CCCCccceeecCCcceEEEEEEc--------CCcEEEEEEeeccccC--HHHHHHHHHHHhhc-CCCCcccceeEEEecC
Q 004248 534 GDFSDANLIKNGHSGDLFRGILE--------GGIPVVIKRIDLQSVK--TEAYLLELDFFSKV-SHARLVPLLGHCMERE 602 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~~--------~g~~vavK~l~~~~~~--~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~ 602 (766)
++|...+.||+|+||.||+|+.. .+..||||++...... .+++.+|+++++++ +|||||++++++.. +
T Consensus 69 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~-~ 147 (382)
T 3tt0_A 69 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ-D 147 (382)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-S
T ss_pred hheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeecc-C
Confidence 56888899999999999999842 2468999999754332 46799999999999 99999999998765 5
Q ss_pred CcEEEEEeeCCCCChhhhhhccCCCC---------CcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeee
Q 004248 603 NEKFLVYKYMPNGDLSSSLYRKTNTE---------DDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILL 673 (766)
Q Consensus 603 ~~~~lV~Ey~~~GsL~~~l~~~~~~~---------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl 673 (766)
+..++||||+++|+|.+++....... .....+++.++..++.|++.||+|||+. +|+||||||+|||+
T Consensus 148 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll 224 (382)
T 3tt0_A 148 GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLV 224 (382)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEE
T ss_pred CceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCcceEEE
Confidence 67999999999999999998654210 1123599999999999999999999998 99999999999999
Q ss_pred CCCCcEEeccchhhhhcCC-----CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCC
Q 004248 674 DDKFEVRLGSLSEVCAQGG-----DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNL 747 (766)
Q Consensus 674 ~~~~~~kl~DFG~a~~~~~-----~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~ 747 (766)
++++.+||+|||+++.... ......+|..|+|||...... ++.++|||||||++|||+| |+.||.
T Consensus 225 ~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~---------~~~~~DiwslG~il~ellt~g~~p~~ 295 (382)
T 3tt0_A 225 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRI---------YTHQSDVWSFGVLLWEIFTLGGSPYP 295 (382)
T ss_dssp CTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCC---------CCHHHHHHHHHHHHHHHHTTSCCSST
T ss_pred cCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCC---------CCchhHHHHHHHHHHHHHhCCCCCCC
Confidence 9999999999999986532 223345678899999876543 5789999999999999999 999985
Q ss_pred CC
Q 004248 748 SS 749 (766)
Q Consensus 748 ~~ 749 (766)
..
T Consensus 296 ~~ 297 (382)
T 3tt0_A 296 GV 297 (382)
T ss_dssp TC
T ss_pred CC
Confidence 43
No 148
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=8.1e-35 Score=318.38 Aligned_cols=208 Identities=21% Similarity=0.250 Sum_probs=173.7
Q ss_pred HHHHHHhCCCCccceeecCCcceEEEEEEc-CCcEEEEEEeeccccC---------HHHHHHHHHHHhhc-CCCCcccce
Q 004248 527 QQLLAATGDFSDANLIKNGHSGDLFRGILE-GGIPVVIKRIDLQSVK---------TEAYLLELDFFSKV-SHARLVPLL 595 (766)
Q Consensus 527 ~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~---------~~~~~~E~~~l~~l-~H~niv~l~ 595 (766)
+......++|+..+.||+|+||.||+|+.. +|+.||||+++..... .+.+.+|+++++++ +||||++++
T Consensus 87 ~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~ 166 (365)
T 2y7j_A 87 AAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLI 166 (365)
T ss_dssp HHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEE
T ss_pred hhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEE
Confidence 334445567999999999999999999964 7999999998754321 35688999999999 799999999
Q ss_pred eEEEecCCcEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCC
Q 004248 596 GHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDD 675 (766)
Q Consensus 596 ~~~~~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~ 675 (766)
+++.. .+..|+||||+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.
T Consensus 167 ~~~~~-~~~~~lv~e~~~g~~L~~~l~~~~-------~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~~ 235 (365)
T 2y7j_A 167 DSYES-SSFMFLVFDLMRKGELFDYLTEKV-------ALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDD 235 (365)
T ss_dssp EEEEB-SSEEEEEECCCTTCBHHHHHHHHS-------SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECT
T ss_pred EEEee-CCEEEEEEEeCCCCcHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECC
Confidence 97765 568999999999999999997543 389999999999999999999998 9999999999999999
Q ss_pred CCcEEeccchhhhhcCC--CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 676 KFEVRLGSLSEVCAQGG--DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 676 ~~~~kl~DFG~a~~~~~--~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
++.+||+|||++..... ......+|+.|+|||...+...... ..++.++|||||||++|||+||+.||..
T Consensus 236 ~~~ikl~DfG~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~---~~~~~~~Di~slG~il~ell~g~~pf~~ 307 (365)
T 2y7j_A 236 NMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETH---PGYGKEVDLWACGVILFTLLAGSPPFWH 307 (365)
T ss_dssp TCCEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHTTCTTS---CCBCTTHHHHHHHHHHHHHHHSSCSSCC
T ss_pred CCCEEEEecCcccccCCCcccccCCCCCCccChhhccccccccC---cCCCchhhHHhHHHHHHHHHHCCCCCCC
Confidence 99999999999976632 3345678999999997643211000 0157899999999999999999999954
No 149
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=3e-35 Score=309.63 Aligned_cols=196 Identities=22% Similarity=0.311 Sum_probs=156.8
Q ss_pred CCCCccceeecCCcceEEEEEEc----CCcEEEEEEeeccccC--HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGILE----GGIPVVIKRIDLQSVK--TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFL 607 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~~----~g~~vavK~l~~~~~~--~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~l 607 (766)
++|+..+.||+|+||.||+|... .+..||||++...... .+.+.+|+.++++++||||+++++++. ++..|+
T Consensus 15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~--~~~~~l 92 (281)
T 1mp8_A 15 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT--ENPVWI 92 (281)
T ss_dssp GGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC--SSSCEE
T ss_pred HHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc--cCccEE
Confidence 46888899999999999999853 2567999998653322 567999999999999999999999764 457899
Q ss_pred EEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhh
Q 004248 608 VYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEV 687 (766)
Q Consensus 608 V~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a 687 (766)
||||+++|+|.+++.... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 93 v~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 163 (281)
T 1mp8_A 93 IMELCTLGELRSFLQVRK------YSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLS 163 (281)
T ss_dssp EEECCTTEEHHHHHHHTT------TTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC----
T ss_pred EEecCCCCCHHHHHHhcC------CCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECccccc
Confidence 999999999999997543 2489999999999999999999998 9999999999999999999999999999
Q ss_pred hhcCCC----CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCCC
Q 004248 688 CAQGGD----AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLSS 749 (766)
Q Consensus 688 ~~~~~~----~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~~ 749 (766)
+..... .....++..|+|||...... ++.++|||||||++|||++ |+.||...
T Consensus 164 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~Di~slG~~l~ell~~g~~pf~~~ 221 (281)
T 1mp8_A 164 RYMEDSTYYKASKGKLPIKWMAPESINFRR---------FTSASDVWMFGVCMWEILMHGVKPFQGV 221 (281)
T ss_dssp ---------------CCGGGCCHHHHHHCC---------CSHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred cccCcccccccccCCCcccccChhhcccCC---------CCCccCchHHHHHHHHHHhcCCCCCCcC
Confidence 876332 22334567899999875433 4789999999999999997 99999643
No 150
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=5.8e-35 Score=332.07 Aligned_cols=195 Identities=15% Similarity=0.242 Sum_probs=168.2
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccc---cCHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQS---VKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVY 609 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~ 609 (766)
++|+..++||+|+||.||+|+. .+++.||||++.... ...+.+.+|++++++++|||||++++++.. .+..|+||
T Consensus 22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~~lv~ 100 (486)
T 3mwu_A 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILED-SSSFYIVG 100 (486)
T ss_dssp HHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-SSEEEEEE
T ss_pred cceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEc-CCEEEEEE
Confidence 4688999999999999999995 579999999996532 236789999999999999999999998765 56899999
Q ss_pred eeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeC---CCCcEEeccchh
Q 004248 610 KYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLD---DKFEVRLGSLSE 686 (766)
Q Consensus 610 Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~---~~~~~kl~DFG~ 686 (766)
|||++|+|.+.+.... .+++.++..++.|++.||+|||+. +|+||||||+|||++ .++.+||+|||+
T Consensus 101 e~~~~~~L~~~~~~~~-------~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~ 170 (486)
T 3mwu_A 101 ELYTGGELFDEIIKRK-------RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGL 170 (486)
T ss_dssp CCCCSCBHHHHHHHHS-------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEECSCSC
T ss_pred EcCCCCcHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEEECCc
Confidence 9999999999987654 389999999999999999999998 999999999999995 456799999999
Q ss_pred hhhcCCC--CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 687 VCAQGGD--AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 687 a~~~~~~--~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
++..... .....||+.|+|||.+.+ . ++.++||||+||++|||++|+.||...
T Consensus 171 a~~~~~~~~~~~~~gt~~y~aPE~~~~-~---------~~~~~DiwslG~il~~ll~g~~pf~~~ 225 (486)
T 3mwu_A 171 STCFQQNTKMKDRIGTAYYIAPEVLRG-T---------YDEKCDVWSAGVILYILLSGTPPFYGK 225 (486)
T ss_dssp TTTBCCC----CCTTGGGGCCGGGGGS-C---------CCHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred CeECCCCCccCCCcCCCCCCCHHHhCC-C---------CCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 9866332 345578999999998753 2 478999999999999999999999543
No 151
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.8e-35 Score=318.14 Aligned_cols=210 Identities=18% Similarity=0.236 Sum_probs=170.7
Q ss_pred HHHHHhCCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccCHHHHHHHHHHHhhc-CCCCcccceeEEEec----
Q 004248 528 QLLAATGDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVKTEAYLLELDFFSKV-SHARLVPLLGHCMER---- 601 (766)
Q Consensus 528 ~l~~~~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~---- 601 (766)
++....++|+..+.||+|+||.||+|+. .+|+.||||++.......+++.+|+++++++ +||||+++++++...
T Consensus 18 ~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~ 97 (326)
T 2x7f_A 18 ALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPG 97 (326)
T ss_dssp CCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSTTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--C
T ss_pred hccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCcc
Confidence 3344567899999999999999999995 5789999999977665677899999999999 899999999988653
Q ss_pred -CCcEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEE
Q 004248 602 -ENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVR 680 (766)
Q Consensus 602 -~~~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~k 680 (766)
.+..++||||+++|+|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+|
T Consensus 98 ~~~~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~k 169 (326)
T 2x7f_A 98 MDDQLWLVMEFCGAGSVTDLIKNTKG-----NTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVK 169 (326)
T ss_dssp CCCEEEEEEECCTTEEHHHHHHHSGG-----GCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEE
T ss_pred ccceEEEEEEcCCCCcHHHHHHhccc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCCEE
Confidence 3578999999999999999976432 3489999999999999999999998 999999999999999999999
Q ss_pred eccchhhhhcCCC---CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 681 LGSLSEVCAQGGD---AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 681 l~DFG~a~~~~~~---~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
|+|||+++..... .....+|..|+|||........... ++.++|||||||++|||+||+.||...
T Consensus 170 l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~----~~~~~Di~slG~il~~l~~g~~p~~~~ 237 (326)
T 2x7f_A 170 LVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDAT----YDFKSDLWSLGITAIEMAEGAPPLCDM 237 (326)
T ss_dssp ECCCTTTC-------------CCGGGCCHHHHC------------CCTTHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred EeeCcCceecCcCccccccccCCccccChhhhccccccCcC----CCccchHHHHHHHHHHHHhCCCCCCCC
Confidence 9999999765322 2345689999999987532211111 578999999999999999999999543
No 152
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=9e-35 Score=307.94 Aligned_cols=196 Identities=14% Similarity=0.166 Sum_probs=169.8
Q ss_pred CCCCccceeecCCcceEEEEEEc-CCcEEEEEEeecccc----CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGILE-GGIPVVIKRIDLQSV----KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLV 608 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~----~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV 608 (766)
++|...+.||+|+||.||+|... +++.||+|.+..... ..+.+.+|++++++++||||+++++++.+ ++..++|
T Consensus 15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~lv 93 (294)
T 2rku_A 15 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFED-NDFVFVV 93 (294)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEC-SSEEEEE
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeecc-CCEEEEE
Confidence 56888999999999999999964 688999999975432 25678999999999999999999998765 5689999
Q ss_pred EeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhh
Q 004248 609 YKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVC 688 (766)
Q Consensus 609 ~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~ 688 (766)
|||+++|+|.+++.... .+++.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 94 ~e~~~~~~L~~~~~~~~-------~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~ 163 (294)
T 2rku_A 94 LELCRRRSLLELHKRRK-------ALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLAT 163 (294)
T ss_dssp EECCTTCBHHHHHHHHC-------SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred EecCCCCCHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEeccCce
Confidence 99999999999987543 389999999999999999999998 99999999999999999999999999997
Q ss_pred hcC---CCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 689 AQG---GDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 689 ~~~---~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
... .......+|..|+|||...... ++.++|||||||++|||+||+.||...
T Consensus 164 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~Di~slG~~l~~l~~g~~p~~~~ 218 (294)
T 2rku_A 164 KVEYDGERKKVLCGTPNYIAPEVLSKKG---------HSFEVDVWSIGCIMYTLLVGKPPFETS 218 (294)
T ss_dssp ECCSTTCCBCCCCSCCSSCCHHHHTTSC---------BCTHHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred ecccCccccccccCCCCcCCcchhccCC---------CCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 653 2233456889999999875443 478999999999999999999999643
No 153
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=4.1e-35 Score=323.61 Aligned_cols=202 Identities=18% Similarity=0.179 Sum_probs=164.8
Q ss_pred CCCCccceeecCCcceEEEEEEcCCcEEEEEEeeccccC---HHHHHHHHHHHhhcC--CCCcccceeEEEecCCcEEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVK---TEAYLLELDFFSKVS--HARLVPLLGHCMERENEKFLV 608 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~---~~~~~~E~~~l~~l~--H~niv~l~~~~~~~~~~~~lV 608 (766)
++|+..+.||+|+||.||+|...+++.||||++...... .+++.+|+++|++++ |||||++++++.. ++..|+|
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~-~~~~~lv 134 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEIT-DQYIYMV 134 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-SSEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEec-CCEEEEE
Confidence 348889999999999999999878999999999765433 467999999999996 5999999998776 5679999
Q ss_pred EeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhh
Q 004248 609 YKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVC 688 (766)
Q Consensus 609 ~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~ 688 (766)
|| +.+|+|.+++.+.. .+++.++..++.||+.||+|||+. +|+||||||+|||++ ++.+||+|||+++
T Consensus 135 ~E-~~~~~L~~~l~~~~-------~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DFG~a~ 202 (390)
T 2zmd_A 135 ME-CGNIDLNSWLKKKK-------SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIAN 202 (390)
T ss_dssp EE-CCSEEHHHHHHHCS-------SCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCCSSSC
T ss_pred Ee-cCCCCHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEecCccc
Confidence 99 56789999998654 389999999999999999999998 999999999999996 5899999999998
Q ss_pred hcCCC-----CccceeeecccCCCCCCCCceeee--eeeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 689 AQGGD-----AHQSRITRLLRLPQSSEQGSSGMV--IYLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 689 ~~~~~-----~~~~~~t~~y~aPe~~~~~~~g~~--~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
..... ....+||+.|+|||.+........ .....++.++|||||||++|||++|+.||..
T Consensus 203 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~ 269 (390)
T 2zmd_A 203 QMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ 269 (390)
T ss_dssp CC---------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred cccCCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchh
Confidence 66322 234578999999998754211000 0001268999999999999999999999954
No 154
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=3.6e-35 Score=306.99 Aligned_cols=197 Identities=19% Similarity=0.273 Sum_probs=157.4
Q ss_pred CCCCccceeecCCcceEEEEEEcCCcEEEEEEeecccc-----CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSV-----KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLV 608 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~-----~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV 608 (766)
++|+..+.||+|+||.||+|... |+.||||++..... ..+.+.+|++++++++||||+++++++.. ++..++|
T Consensus 7 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv 84 (271)
T 3dtc_A 7 AELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLK-EPNLCLV 84 (271)
T ss_dssp TSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECC-C--CEEE
T ss_pred hheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEec-CCceEEE
Confidence 56888999999999999999965 88999999865332 14679999999999999999999998765 5678999
Q ss_pred EeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCC--------CCcEE
Q 004248 609 YKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDD--------KFEVR 680 (766)
Q Consensus 609 ~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~--------~~~~k 680 (766)
|||+++|+|.+++..+ .+++..+..++.|++.||+|||+....+|+||||||+||+++. ++.+|
T Consensus 85 ~e~~~~~~L~~~~~~~--------~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~k 156 (271)
T 3dtc_A 85 MEFARGGPLNRVLSGK--------RIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILK 156 (271)
T ss_dssp EECCTTEEHHHHHTSS--------CCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEE
T ss_pred EEcCCCCCHHHHhhcC--------CCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceE
Confidence 9999999999998532 3899999999999999999999983333999999999999986 67899
Q ss_pred eccchhhhhcCCC-CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 681 LGSLSEVCAQGGD-AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 681 l~DFG~a~~~~~~-~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
|+|||+++..... .....+|..|+|||...... ++.++|||||||++|||+||+.||...
T Consensus 157 l~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~Di~slG~~l~~l~~g~~p~~~~ 217 (271)
T 3dtc_A 157 ITDFGLAREWHRTTKMSAAGAYAWMAPEVIRASM---------FSKGSDVWSYGVLLWELLTGEVPFRGI 217 (271)
T ss_dssp ECCCCC-------------CCGGGSCHHHHHHCC---------CSHHHHHHHHHHHHHHHHHCCCTTTTS
T ss_pred EccCCcccccccccccCCCCccceeCHHHhccCC---------CCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 9999999865332 33456899999999875433 478999999999999999999999543
No 155
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=1e-34 Score=304.35 Aligned_cols=197 Identities=15% Similarity=0.219 Sum_probs=164.1
Q ss_pred CCCCccceeecCCcceEEEEEEc-CCcEEEEEEeecccc----CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGILE-GGIPVVIKRIDLQSV----KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLV 608 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~----~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV 608 (766)
++|...+.||+|+||.||+|+.. +|+.||||.+..... ..+.+.+|++++++++||||+++++++.. ++..++|
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv 89 (276)
T 2h6d_A 11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVIST-PTDFFMV 89 (276)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-SSEEEEE
T ss_pred ccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEec-CCeEEEE
Confidence 57888999999999999999964 799999999965432 25679999999999999999999998765 5689999
Q ss_pred EeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhh
Q 004248 609 YKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVC 688 (766)
Q Consensus 609 ~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~ 688 (766)
|||+++|+|.+++.... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 90 ~e~~~~~~L~~~l~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~ 159 (276)
T 2h6d_A 90 MEYVSGGELFDYICKHG-------RVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSN 159 (276)
T ss_dssp EECCCSCBHHHHHHHHC-------SCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCCGGG
T ss_pred EeccCCCcHHHHHhccC-------CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeeccccc
Confidence 99999999999997653 389999999999999999999998 99999999999999999999999999998
Q ss_pred hcCCC--CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 689 AQGGD--AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 689 ~~~~~--~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
..... .....++..|+|||......+ .+.++|||||||++|||++|+.||...
T Consensus 160 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~--------~~~~~Di~slG~~l~~l~~g~~p~~~~ 214 (276)
T 2h6d_A 160 MMSDGEFLRTSCGSPNYAAPEVISGRLY--------AGPEVDIWSCGVILYALLCGTLPFDDE 214 (276)
T ss_dssp CCCC-------------CCTGGGTTSCC--------CHHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ccCCCcceecccCCccccCHHHHcCCCC--------CCccchHHHHHHHHHHHHhCCCCCCCC
Confidence 76332 234568899999998765432 368999999999999999999999643
No 156
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=7.8e-35 Score=306.45 Aligned_cols=196 Identities=15% Similarity=0.167 Sum_probs=167.5
Q ss_pred CCCCccceeecCCcceEEEEEEc-CCcEEEEEEeecccc-------CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcE
Q 004248 534 GDFSDANLIKNGHSGDLFRGILE-GGIPVVIKRIDLQSV-------KTEAYLLELDFFSKVSHARLVPLLGHCMERENEK 605 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-------~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 605 (766)
++|+..+.||+|+||.||+|+.. +|+.||||.+..... ..+.+.+|++++++++||||+++++++.. .+..
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~ 83 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFEN-KTDV 83 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-SSEE
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecC-CCeE
Confidence 45888999999999999999964 689999999975432 25789999999999999999999998765 5689
Q ss_pred EEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCC----cEEe
Q 004248 606 FLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKF----EVRL 681 (766)
Q Consensus 606 ~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~----~~kl 681 (766)
++||||+++|+|.+++.+.. .+++.++..++.|++.||+|||+. +|+||||||+||+++.++ .+||
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~-------~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~~kl 153 (283)
T 3bhy_A 84 VLILELVSGGELFDFLAEKE-------SLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKL 153 (283)
T ss_dssp EEEEECCCSCBHHHHHHHHS-------SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCCEEE
T ss_pred EEEEeecCCCcHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCceEE
Confidence 99999999999999997643 389999999999999999999998 999999999999999877 8999
Q ss_pred ccchhhhhcCC--CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 682 GSLSEVCAQGG--DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 682 ~DFG~a~~~~~--~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
+|||+++.... ......+|..|+|||...... ++.++|||||||++|||+||+.||...
T Consensus 154 ~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~Di~slG~il~~l~~g~~p~~~~ 214 (283)
T 3bhy_A 154 IDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEP---------LGLEADMWSIGVITYILLSGASPFLGE 214 (283)
T ss_dssp CCCTTCEECC--------CCCGGGCCHHHHTTCC---------CCTHHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred EecccceeccCCCcccccCCCcCccCcceecCCC---------CCcchhhhhHHHHHHHHHHCCCCCCCc
Confidence 99999986532 233456889999999875543 478999999999999999999999543
No 157
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.4e-35 Score=318.12 Aligned_cols=199 Identities=19% Similarity=0.269 Sum_probs=162.8
Q ss_pred HHhCCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC------HHHHHHHHHHHhhcCCCCcccceeEEEecCC
Q 004248 531 AATGDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK------TEAYLLELDFFSKVSHARLVPLLGHCMEREN 603 (766)
Q Consensus 531 ~~~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~------~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~ 603 (766)
...++|+..+.||+|+||.||+|+. .+|+.||||++...... .+.+.+|++++++++|||||++++++.. .+
T Consensus 7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~ 85 (346)
T 1ua2_A 7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGH-KS 85 (346)
T ss_dssp ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECC-TT
T ss_pred HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEee-CC
Confidence 3457899999999999999999995 56899999999653221 2468899999999999999999997765 56
Q ss_pred cEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEecc
Q 004248 604 EKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGS 683 (766)
Q Consensus 604 ~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~D 683 (766)
..++||||+++ +|.+++.... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 86 ~~~lv~e~~~~-~l~~~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~D 155 (346)
T 1ua2_A 86 NISLVFDFMET-DLEVIIKDNS------LVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLAD 155 (346)
T ss_dssp CCEEEEECCSE-EHHHHHTTCC------SSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC
T ss_pred ceEEEEEcCCC-CHHHHHHhcC------cCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEEEEe
Confidence 79999999985 8998886543 2488899999999999999999998 999999999999999999999999
Q ss_pred chhhhhcCC---CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 684 LSEVCAQGG---DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 684 FG~a~~~~~---~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
||+++.... ......+|+.|+|||....... ++.++|||||||++|||++|++||..
T Consensus 156 fg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~--------~~~~~DiwslG~il~ell~g~~~~~~ 215 (346)
T 1ua2_A 156 FGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARM--------YGVGVDMWAVGCILAELLLRVPFLPG 215 (346)
T ss_dssp CGGGSTTTSCCCCCCCSCCCCTTCCHHHHTTCSC--------CCHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred cccceeccCCcccCCcccccccccCchHhhCCCC--------CCchhhhHhHHHHHHHHHHCCCCCCC
Confidence 999987632 2344578999999998754321 47899999999999999999988854
No 158
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=2e-35 Score=311.96 Aligned_cols=195 Identities=20% Similarity=0.297 Sum_probs=164.5
Q ss_pred CCCCccceeecCCcceEEEEEEc-CC-------cEEEEEEeeccccC-HHHHHHHHHHHhhcCCCCcccceeEEEecCCc
Q 004248 534 GDFSDANLIKNGHSGDLFRGILE-GG-------IPVVIKRIDLQSVK-TEAYLLELDFFSKVSHARLVPLLGHCMERENE 604 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~~-~g-------~~vavK~l~~~~~~-~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 604 (766)
++|...+.||+|+||.||+|+.. ++ ..||+|.+...... .+++.+|++++++++||||+++++++.. ++.
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~ 86 (289)
T 4fvq_A 8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVC-GDE 86 (289)
T ss_dssp GGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECC-TTC
T ss_pred hHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEe-CCC
Confidence 46888899999999999999843 34 57999999655433 6789999999999999999999998765 567
Q ss_pred EEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCc------
Q 004248 605 KFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFE------ 678 (766)
Q Consensus 605 ~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~------ 678 (766)
.++||||+++|+|.+++.+.. ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.
T Consensus 87 ~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~ 157 (289)
T 4fvq_A 87 NILVQEFVKFGSLDTYLKKNK------NCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNP 157 (289)
T ss_dssp CEEEEECCTTCBHHHHHHHTG------GGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGGGTBC
T ss_pred CEEEEECCCCCCHHHHHHhCC------CCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCccccccc
Confidence 899999999999999997643 2489999999999999999999998 9999999999999998887
Q ss_pred --EEeccchhhhhcCCCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCC
Q 004248 679 --VRLGSLSEVCAQGGDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNL 747 (766)
Q Consensus 679 --~kl~DFG~a~~~~~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~ 747 (766)
+||+|||+++..... ....+|..|+|||....... ++.++|||||||++|||+||..|+.
T Consensus 158 ~~~kl~Dfg~~~~~~~~-~~~~~~~~y~aPE~~~~~~~--------~~~~~DiwslG~il~el~~g~~~~~ 219 (289)
T 4fvq_A 158 PFIKLSDPGISITVLPK-DILQERIPWVPPECIENPKN--------LNLATDKWSFGTTLWEICSGGDKPL 219 (289)
T ss_dssp CEEEECCCCSCTTTSCH-HHHHHTTTTSCHHHHHCGGG--------CCHHHHHHHHHHHHHHHHTTTCCTT
T ss_pred ceeeeccCcccccccCc-cccCCcCcccCHHHhCCCCC--------CCchhHHHHHHHHHHHHHcCCCCCc
Confidence 999999998765322 23457888999998754221 5789999999999999999665554
No 159
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=7.2e-35 Score=313.92 Aligned_cols=196 Identities=16% Similarity=0.192 Sum_probs=168.0
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccCHHHHHHHHHHHhhcC-CCCcccceeEEEec-CCcEEEEEe
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVKTEAYLLELDFFSKVS-HARLVPLLGHCMER-ENEKFLVYK 610 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~-~~~~~lV~E 610 (766)
++|+..+.||+|+||.||+|+. .+++.||||+++.. ..+.+.+|++++++++ ||||+++++++... ....++|||
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e 113 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV--KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFE 113 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC--CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc--chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEe
Confidence 5688899999999999999984 67899999998643 3578999999999997 99999999987653 346899999
Q ss_pred eCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCC-cEEeccchhhhh
Q 004248 611 YMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKF-EVRLGSLSEVCA 689 (766)
Q Consensus 611 y~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~-~~kl~DFG~a~~ 689 (766)
|+++|+|.+++. .+++.++..++.|++.||+|||+. +|+||||||+|||++.++ .+||+|||+++.
T Consensus 114 ~~~~~~l~~~~~----------~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~ 180 (330)
T 3nsz_A 114 HVNNTDFKQLYQ----------TLTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 180 (330)
T ss_dssp CCCCCCHHHHGG----------GCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred ccCchhHHHHHH----------hCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCCceE
Confidence 999999999884 278999999999999999999998 999999999999999776 899999999986
Q ss_pred cC--CCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCCccc
Q 004248 690 QG--GDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSSRFG 752 (766)
Q Consensus 690 ~~--~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~~~~ 752 (766)
.. .......+|+.|+|||....... ++.++|||||||++|||+||+.||......
T Consensus 181 ~~~~~~~~~~~~~~~y~aPE~~~~~~~--------~~~~~DiwslG~il~~ll~g~~p~~~~~~~ 237 (330)
T 3nsz_A 181 YHPGQEYNVRVASRYFKGPELLVDYQM--------YDYSLDMWSLGCMLASMIFRKEPFFHGHDN 237 (330)
T ss_dssp CCTTCCCCSCCSCGGGCCHHHHTTCCC--------CCTHHHHHHHHHHHHHHHHTCSSSSCCSSH
T ss_pred cCCCCccccccccccccChhhhcCCCc--------CCchhhHHHHHHHHHHHHhCCCCcccCCch
Confidence 53 23345578999999998754222 578999999999999999999999655443
No 160
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=1.6e-35 Score=311.13 Aligned_cols=197 Identities=21% Similarity=0.331 Sum_probs=161.0
Q ss_pred CCCCccceeecCCcceEEEEEEcCCcEEEEEEeeccccCHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEeeCC
Q 004248 534 GDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMP 613 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey~~ 613 (766)
++|+..+.||+|+||.||+|... |+.||||.++... ..+++.+|++++++++||||+++++++.+.++..++||||++
T Consensus 21 ~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 98 (278)
T 1byg_A 21 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMA 98 (278)
T ss_dssp GGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC---HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCT
T ss_pred hhceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh-HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecCC
Confidence 56888999999999999999864 8899999986543 456799999999999999999999987765557899999999
Q ss_pred CCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcCCC
Q 004248 614 NGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGD 693 (766)
Q Consensus 614 ~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~~~ 693 (766)
+|+|.+++.+... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 99 ~~~L~~~l~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~ 170 (278)
T 1byg_A 99 KGSLVDYLRSRGR-----SVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST 170 (278)
T ss_dssp TEEHHHHHHHHHH-----HHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC-------
T ss_pred CCCHHHHHHhccc-----ccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeecccccccccc
Confidence 9999999975431 2378999999999999999999998 9999999999999999999999999999876554
Q ss_pred CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCCC
Q 004248 694 AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLSS 749 (766)
Q Consensus 694 ~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~~ 749 (766)
.....++..|+|||...... ++.++|||||||++|||+| |+.||...
T Consensus 171 ~~~~~~~~~y~aPE~~~~~~---------~~~~~Di~slG~il~~l~t~g~~p~~~~ 218 (278)
T 1byg_A 171 QDTGKLPVKWTAPEALREKK---------FSTKSDVWSFGILLWEIYSFGRVPYPRI 218 (278)
T ss_dssp -----CCTTTSCHHHHHHCC---------CCHHHHHHHHHHHHHHHHTTSCCSCTTS
T ss_pred ccCCCccccccCHHHhCCCC---------CCchhcHHHHHHHHHHHHhCCCCCCCCC
Confidence 44556788899999875433 4789999999999999998 99998543
No 161
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6.4e-35 Score=316.31 Aligned_cols=206 Identities=22% Similarity=0.317 Sum_probs=168.1
Q ss_pred HhCCCCccceeecCCcceEEEEEE------cCCcEEEEEEeecccc--CHHHHHHHHHHHhhc-CCCCcccceeEEEecC
Q 004248 532 ATGDFSDANLIKNGHSGDLFRGIL------EGGIPVVIKRIDLQSV--KTEAYLLELDFFSKV-SHARLVPLLGHCMERE 602 (766)
Q Consensus 532 ~~~~~~~~~~ig~G~~g~Vy~~~~------~~g~~vavK~l~~~~~--~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~ 602 (766)
..++|...+.||+|+||.||+|.. .+++.||||.+..... ..+.+.+|+++++++ +||||+++++++.. +
T Consensus 43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~-~ 121 (344)
T 1rjb_A 43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTL-S 121 (344)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECS-S
T ss_pred CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEee-C
Confidence 346788899999999999999985 2466899999975432 256899999999999 89999999998765 5
Q ss_pred CcEEEEEeeCCCCChhhhhhccCCCC----------------CcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCC
Q 004248 603 NEKFLVYKYMPNGDLSSSLYRKTNTE----------------DDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDV 666 (766)
Q Consensus 603 ~~~~lV~Ey~~~GsL~~~l~~~~~~~----------------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDl 666 (766)
+..++||||+++|+|.+++....... .....++|.++..++.|++.||+|||+. +|+||||
T Consensus 122 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Di 198 (344)
T 1rjb_A 122 GPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDL 198 (344)
T ss_dssp SSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEETTC
T ss_pred CccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCC
Confidence 68999999999999999997643210 0113489999999999999999999998 9999999
Q ss_pred CCCCeeeCCCCcEEeccchhhhhcCCCC-----ccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc
Q 004248 667 QASSILLDDKFEVRLGSLSEVCAQGGDA-----HQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF 741 (766)
Q Consensus 667 Kp~NILl~~~~~~kl~DFG~a~~~~~~~-----~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt 741 (766)
||+||+++.++.+||+|||+++...... ....+|..|+|||...... ++.++|||||||++|||+|
T Consensus 199 kp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~---------~~~~~Di~slG~il~el~t 269 (344)
T 1rjb_A 199 AARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGI---------YTIKSDVWSYGILLWEIFS 269 (344)
T ss_dssp SGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCC---------CCHHHHHHHHHHHHHHHTT
T ss_pred ChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCC---------CChhHhHHHHHHHHHHHHc
Confidence 9999999999999999999998653221 2345677899999775433 4789999999999999998
Q ss_pred -CCCCCCCCc
Q 004248 742 -NNHLNLSSR 750 (766)
Q Consensus 742 -G~~p~~~~~ 750 (766)
|+.||....
T Consensus 270 ~g~~p~~~~~ 279 (344)
T 1rjb_A 270 LGVNPYPGIP 279 (344)
T ss_dssp TSCCSSTTCC
T ss_pred CCCCCcccCC
Confidence 999995543
No 162
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.1e-34 Score=309.83 Aligned_cols=197 Identities=16% Similarity=0.138 Sum_probs=163.3
Q ss_pred hCCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC----HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEE
Q 004248 533 TGDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK----TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFL 607 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~----~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~l 607 (766)
.++|...+.||+|+||.||+|.. .+++.||||++...... .+++.+|++++++++||||+++++++.. ++..|+
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~-~~~~~l 111 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEI-DGQLYV 111 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEE-TTEEEE
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEee-CCeEEE
Confidence 47899999999999999999995 47899999999754322 4678999999999999999999998876 568999
Q ss_pred EEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhh
Q 004248 608 VYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEV 687 (766)
Q Consensus 608 V~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a 687 (766)
||||+++|+|.+++.... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 112 v~e~~~~~~L~~~l~~~~-------~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~Dfg~~ 181 (309)
T 2h34_A 112 DMRLINGVDLAAMLRRQG-------PLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDFGIA 181 (309)
T ss_dssp EEECCCCEEHHHHHHHHC-------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSCCC-
T ss_pred EEEecCCCCHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEecCccC
Confidence 999999999999997653 389999999999999999999998 9999999999999999999999999998
Q ss_pred hhcCCC----CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 688 CAQGGD----AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 688 ~~~~~~----~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
+..... .....++..|+|||...... ++.++|||||||++|||+||+.||...
T Consensus 182 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~Di~slG~il~~l~~g~~pf~~~ 238 (309)
T 2h34_A 182 SATTDEKLTQLGNTVGTLYYMAPERFSESH---------ATYRADIYALTCVLYECLTGSPPYQGD 238 (309)
T ss_dssp ---------------CCGGGCCGGGTCC-------------CCCHHHHHHHHHHHHHHSSCSSCSC
T ss_pred ccccccccccccccCCCcCccCHHHHcCCC---------CCchHhHHHHHHHHHHHHHCCCCCCCc
Confidence 765322 23446889999999876543 478999999999999999999999643
No 163
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=5.3e-35 Score=312.43 Aligned_cols=204 Identities=18% Similarity=0.264 Sum_probs=168.8
Q ss_pred hCCCCccceeecCCcceEEEEEE------cCCcEEEEEEeeccccC--HHHHHHHHHHHhhcCCCCcccceeEEEecCCc
Q 004248 533 TGDFSDANLIKNGHSGDLFRGIL------EGGIPVVIKRIDLQSVK--TEAYLLELDFFSKVSHARLVPLLGHCMERENE 604 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~~------~~g~~vavK~l~~~~~~--~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 604 (766)
.++|...+.||+|+||.||+|.. .+++.||||++...... .+++.+|++++++++|||||++++++.+ ++.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~ 100 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQ-DGP 100 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSS
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEec-CCc
Confidence 35688889999999999999984 34589999999754322 4679999999999999999999997765 567
Q ss_pred EEEEEeeCCCCChhhhhhccCCCC-----------------CcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCC
Q 004248 605 KFLVYKYMPNGDLSSSLYRKTNTE-----------------DDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQ 667 (766)
Q Consensus 605 ~~lV~Ey~~~GsL~~~l~~~~~~~-----------------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlK 667 (766)
.++||||+++|+|.+++....... .....+++.++..++.|++.||+|||+. +|+|||||
T Consensus 101 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dik 177 (314)
T 2ivs_A 101 LLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLA 177 (314)
T ss_dssp CEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEECCCCS
T ss_pred eEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCcccccc
Confidence 999999999999999997643210 0113489999999999999999999998 99999999
Q ss_pred CCCeeeCCCCcEEeccchhhhhcCCC-----CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-
Q 004248 668 ASSILLDDKFEVRLGSLSEVCAQGGD-----AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF- 741 (766)
Q Consensus 668 p~NILl~~~~~~kl~DFG~a~~~~~~-----~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt- 741 (766)
|+||++++++.+||+|||+++..... .....++..|+|||...... ++.++|||||||++|||+|
T Consensus 178 p~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~Di~slG~il~el~t~ 248 (314)
T 2ivs_A 178 ARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHI---------YTTQSDVWSFGVLLWEIVTL 248 (314)
T ss_dssp GGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCE---------ECHHHHHHHHHHHHHHHHTT
T ss_pred hheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCC---------cCchhhHHHHHHHHHHHHhC
Confidence 99999999999999999999765322 22334577899999875432 5789999999999999999
Q ss_pred CCCCCCCC
Q 004248 742 NNHLNLSS 749 (766)
Q Consensus 742 G~~p~~~~ 749 (766)
|+.||...
T Consensus 249 g~~p~~~~ 256 (314)
T 2ivs_A 249 GGNPYPGI 256 (314)
T ss_dssp SCCSSTTC
T ss_pred CCCCCCCC
Confidence 99999543
No 164
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=9.2e-35 Score=331.88 Aligned_cols=196 Identities=16% Similarity=0.234 Sum_probs=167.3
Q ss_pred hCCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccc--------------cCHHHHHHHHHHHhhcCCCCcccceeE
Q 004248 533 TGDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQS--------------VKTEAYLLELDFFSKVSHARLVPLLGH 597 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~--------------~~~~~~~~E~~~l~~l~H~niv~l~~~ 597 (766)
.++|...++||+|+||.||+|+. .+++.||||++.... ...+++.+|++++++++|||||+++++
T Consensus 35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~ 114 (504)
T 3q5i_A 35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV 114 (504)
T ss_dssp GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 46799999999999999999995 568999999997543 124679999999999999999999998
Q ss_pred EEecCCcEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCC
Q 004248 598 CMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKF 677 (766)
Q Consensus 598 ~~~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~ 677 (766)
+.+ ++..|+|||||++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++
T Consensus 115 ~~~-~~~~~lv~e~~~gg~L~~~l~~~~-------~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~ 183 (504)
T 3q5i_A 115 FED-KKYFYLVTEFYEGGELFEQIINRH-------KFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKN 183 (504)
T ss_dssp EEC-SSEEEEEEECCTTCBHHHHHHHHS-------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESSTT
T ss_pred EEc-CCEEEEEEecCCCCcHHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEecCC
Confidence 765 568999999999999999997654 389999999999999999999998 999999999999999776
Q ss_pred ---cEEeccchhhhhcCC--CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 678 ---EVRLGSLSEVCAQGG--DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 678 ---~~kl~DFG~a~~~~~--~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
.+||+|||+++.... ......||+.|+|||.+.. . ++.++||||+||++|||++|+.||...
T Consensus 184 ~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~---------~~~~~DiwslG~il~~ll~g~~pf~~~ 250 (504)
T 3q5i_A 184 SLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLKK-K---------YNEKCDVWSCGVIMYILLCGYPPFGGQ 250 (504)
T ss_dssp CCSSEEECCCTTCEECCTTSCBCCCCSCTTTCCHHHHTT-C---------BCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred CCccEEEEECCCCEEcCCCCccccccCCcCCCCHHHhcc-C---------CCchHHHHHHHHHHHHHHhCCCCCCCC
Confidence 699999999987643 2345678999999998642 2 478999999999999999999999543
No 165
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=7.9e-36 Score=316.98 Aligned_cols=192 Identities=19% Similarity=0.307 Sum_probs=147.3
Q ss_pred CCCCccceeecCCcceEEEEEEcCCcEEEEEEeeccccCHHHHHHHHHHHhh--cCCCCcccceeEEEecCC---cEEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSK--VSHARLVPLLGHCMEREN---EKFLV 608 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~E~~~l~~--l~H~niv~l~~~~~~~~~---~~~lV 608 (766)
++|...+.||+|+||.||+|+.. |+.||||++... ..+++.+|.+++.. ++||||+++++++..... ..++|
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv 79 (303)
T 3gxj_A 3 RTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR--EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV 79 (303)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-T--THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEEE
T ss_pred ceeeehhhccCCCCeEEEEEEEc-CcceEEEEeccc--chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEEE
Confidence 56889999999999999999864 889999998643 35678889999888 799999999998876432 68999
Q ss_pred EeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhc--------cCCCCCeEecCCCCCCeeeCCCCcEE
Q 004248 609 YKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLH--------HECTLPFVHRDVQASSILLDDKFEVR 680 (766)
Q Consensus 609 ~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH--------~~~~~~iiHrDlKp~NILl~~~~~~k 680 (766)
|||+++|+|.+++.+. .+++.++..++.|++.||+||| +. +|+||||||+|||++.++.+|
T Consensus 80 ~e~~~~g~L~~~l~~~--------~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nil~~~~~~~k 148 (303)
T 3gxj_A 80 SDYHEHGSLFDYLNRY--------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGTCC 148 (303)
T ss_dssp EECCTTCCHHHHHHHC--------CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCCC-
T ss_pred EeccCCCCHHHHHhcc--------CcchHHHHHHHHHHHHHHHHHHHHHhhhccCC---CEeeCcCCHHHeEECCCCCEE
Confidence 9999999999999653 3788889999999999999999 65 999999999999999999999
Q ss_pred eccchhhhhcCCCC-------ccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcC
Q 004248 681 LGSLSEVCAQGGDA-------HQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFN 742 (766)
Q Consensus 681 l~DFG~a~~~~~~~-------~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG 742 (766)
|+|||+++...... ....+|+.|+|||......... ...++.++|||||||++|||+||
T Consensus 149 l~DFg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~---~~~~~~~~DiwslG~il~el~~g 214 (303)
T 3gxj_A 149 IADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMK---HFESFKRADIYAMGLVFWEIARR 214 (303)
T ss_dssp BCCCCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTT---CHHHHHHHHHHC-CCCC-CTGGG
T ss_pred EeecCcceeccCCCcccccccCCCCcCccccCHhhhcCccccc---ccccCcchhHHHHHHHHHHHHhc
Confidence 99999997653221 2236899999999875542210 00156899999999999999999
No 166
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=8.5e-35 Score=314.42 Aligned_cols=196 Identities=14% Similarity=0.171 Sum_probs=170.1
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeecccc----CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV----KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLV 608 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~----~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV 608 (766)
++|...+.||+|+||.||+|.. .+++.||+|.+..... ..+.+.+|++++++++||||+++++++.+ .+..|+|
T Consensus 41 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv 119 (335)
T 2owb_A 41 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFED-NDFVFVV 119 (335)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEC-SSEEEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec-CCeEEEE
Confidence 5688899999999999999995 4688999999975432 25678999999999999999999998765 5689999
Q ss_pred EeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhh
Q 004248 609 YKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVC 688 (766)
Q Consensus 609 ~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~ 688 (766)
|||+++++|.+++.... .+++.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 120 ~e~~~~~~L~~~~~~~~-------~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~ 189 (335)
T 2owb_A 120 LELCRRRSLLELHKRRK-------ALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLAT 189 (335)
T ss_dssp ECCCTTCBHHHHHHHHC-------SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCE
T ss_pred EecCCCCCHHHHHhccC-------CCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeeccCce
Confidence 99999999999987643 389999999999999999999998 99999999999999999999999999998
Q ss_pred hcC---CCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 689 AQG---GDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 689 ~~~---~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
... .......+|..|+|||...... ++.++|||||||++|||+||+.||...
T Consensus 190 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~---------~~~~~Di~slG~il~~l~~g~~pf~~~ 244 (335)
T 2owb_A 190 KVEYDGERKKVLCGTPNYIAPEVLSKKG---------HSFEVDVWSIGCIMYTLLVGKPPFETS 244 (335)
T ss_dssp ECCSTTCCBCCCCSCCSSCCHHHHHTSC---------BCTHHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred ecccCcccccccCCCccccCHHHhccCC---------CCchhhHHHHHHHHHHHHHCcCCCCCC
Confidence 653 2233456889999999875443 468999999999999999999999643
No 167
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=9.4e-35 Score=305.97 Aligned_cols=199 Identities=17% Similarity=0.251 Sum_probs=167.1
Q ss_pred hCCCCccceeecCCcceEEEEEEc-CCcEEEEEEeecccc---CHHHHHHHHHHHhhc-CCCCcccceeEEEecCCcEEE
Q 004248 533 TGDFSDANLIKNGHSGDLFRGILE-GGIPVVIKRIDLQSV---KTEAYLLELDFFSKV-SHARLVPLLGHCMERENEKFL 607 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~---~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~~l 607 (766)
.++|+..+.||+|+||.||+|+.. +++.||||++..... ...++.+|+..+.++ +||||+++++++.+ ++..++
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~-~~~~~l 88 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAE-DDHMLI 88 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEE-TTEEEE
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeec-CCeEEE
Confidence 456889999999999999999964 799999999975432 256789999999999 99999999998876 568999
Q ss_pred EEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCC-----------
Q 004248 608 VYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDK----------- 676 (766)
Q Consensus 608 V~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~----------- 676 (766)
||||+++|+|.+++..... ....+++.++..++.|++.||+|||+. +|+||||||+||+++.+
T Consensus 89 v~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~~~~~ 162 (289)
T 1x8b_A 89 QNEYCNGGSLADAISENYR---IMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGD 162 (289)
T ss_dssp EEECCTTCBHHHHHHHHHH---HTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC-------------
T ss_pred EEEecCCCcHHHHHHhhcc---cccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCcccccccc
Confidence 9999999999999975421 113489999999999999999999998 99999999999999844
Q ss_pred --------CcEEeccchhhhhcCCCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCC
Q 004248 677 --------FEVRLGSLSEVCAQGGDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNL 747 (766)
Q Consensus 677 --------~~~kl~DFG~a~~~~~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~ 747 (766)
..+||+|||.++...... ...+|..|+|||....... +++++|||||||++|||++|++|+.
T Consensus 163 ~~~~~~~~~~~kl~Dfg~~~~~~~~~-~~~gt~~y~aPE~~~~~~~--------~~~~~Di~slG~il~~l~~~~~~~~ 232 (289)
T 1x8b_A 163 EDDWASNKVMFKIGDLGHVTRISSPQ-VEEGDSRFLANEVLQENYT--------HLPKADIFALALTVVCAAGAEPLPR 232 (289)
T ss_dssp -------CCCEEECCCTTCEETTCSC-CCCCCGGGCCHHHHTTCCT--------THHHHHHHHHHHHHHHHTTCCCCCS
T ss_pred cccccCCceEEEEcccccccccCCcc-ccCCCccccChhHhcCCCC--------CCchhhHHHHHHHHHHHhcCCCCCc
Confidence 479999999998764432 3458999999998764322 4689999999999999999997764
No 168
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=3.8e-35 Score=327.09 Aligned_cols=196 Identities=19% Similarity=0.241 Sum_probs=160.1
Q ss_pred CCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccCHHHHHHHHHHHhhcCCCCcccceeEEEecC---C--cEEEE
Q 004248 535 DFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERE---N--EKFLV 608 (766)
Q Consensus 535 ~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~---~--~~~lV 608 (766)
+|+..++||+|+||.||+|+. .+|+.||||++..... .+.+|+++|++++|||||++++++.... + ..++|
T Consensus 55 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~---~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv 131 (420)
T 1j1b_A 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR---FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLV 131 (420)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT---SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEE
T ss_pred eEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch---hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEee
Confidence 578889999999999999996 5699999999865432 2347999999999999999999876421 1 36799
Q ss_pred EeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCC-CcEEeccchhh
Q 004248 609 YKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDK-FEVRLGSLSEV 687 (766)
Q Consensus 609 ~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~-~~~kl~DFG~a 687 (766)
|||+++ +|.+.+..... ....+++..+..++.||++||+|||+. +|+||||||+|||++.+ +.+||+|||++
T Consensus 132 ~e~~~~-~l~~~~~~~~~---~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DFG~a 204 (420)
T 1j1b_A 132 LDYVPE-TVYRVARHYSR---AKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSA 204 (420)
T ss_dssp EECCCE-EHHHHHHHHHH---TTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCCTTC
T ss_pred hhcccc-cHHHHHHHHhh---ccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccchhh
Confidence 999985 77776653111 113589999999999999999999997 99999999999999965 67899999999
Q ss_pred hhcC--CCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 688 CAQG--GDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 688 ~~~~--~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
+... .......+|+.|+|||.+..... ++.++|||||||++|||++|+.||..
T Consensus 205 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~--------~~~~~DiwSlG~il~ell~G~~pf~~ 259 (420)
T 1j1b_A 205 KQLVRGEPNVSYICSRYYRAPELIFGATD--------YTSSIDVWSAGCVLAELLLGQPIFPG 259 (420)
T ss_dssp EECCTTCCCCSCCSCTTSCCHHHHTTCSS--------CCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred hhcccCCCceeeeeCCCcCCHHHHcCCCC--------CCchhhhHHHHHHHHHHHhCCCCCCC
Confidence 8652 23445678999999998754321 57899999999999999999999954
No 169
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=5.5e-35 Score=312.17 Aligned_cols=204 Identities=22% Similarity=0.294 Sum_probs=169.9
Q ss_pred CCCCccceeecCCcceEEEEEE------cCCcEEEEEEeecccc--CHHHHHHHHHHHhhc-CCCCcccceeEEEecCCc
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL------EGGIPVVIKRIDLQSV--KTEAYLLELDFFSKV-SHARLVPLLGHCMERENE 604 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~------~~g~~vavK~l~~~~~--~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~ 604 (766)
++|...+.||+|+||.||+|+. .+++.||||++..... ..+.+.+|+++++++ +||||+++++++.. ++.
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~-~~~ 101 (313)
T 1t46_A 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTI-GGP 101 (313)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSS
T ss_pred hhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEec-CCC
Confidence 5688899999999999999984 3578999999975443 256799999999999 99999999998765 567
Q ss_pred EEEEEeeCCCCChhhhhhccCCC-----------CCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeee
Q 004248 605 KFLVYKYMPNGDLSSSLYRKTNT-----------EDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILL 673 (766)
Q Consensus 605 ~~lV~Ey~~~GsL~~~l~~~~~~-----------~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl 673 (766)
.++||||+++|+|.+++...... ......+++.++..++.|++.||+|||+. +|+||||||+||++
T Consensus 102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~ 178 (313)
T 1t46_A 102 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILL 178 (313)
T ss_dssp CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEE
T ss_pred cEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEE
Confidence 89999999999999999765321 01123589999999999999999999998 99999999999999
Q ss_pred CCCCcEEeccchhhhhcCCCC-----ccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCC
Q 004248 674 DDKFEVRLGSLSEVCAQGGDA-----HQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNL 747 (766)
Q Consensus 674 ~~~~~~kl~DFG~a~~~~~~~-----~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~ 747 (766)
+.++.+||+|||+++...... ....+|..|+|||...... ++.++|||||||++|||+| |+.||.
T Consensus 179 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~Di~slG~il~ellt~g~~p~~ 249 (313)
T 1t46_A 179 THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCV---------YTFESDVWSYGIFLWELFSLGSSPYP 249 (313)
T ss_dssp ETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCC---------CCHHHHHHHHHHHHHHHHTTTCCSST
T ss_pred cCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCC---------CChHHHHHHHHHHHHHHHhCCCCCCC
Confidence 999999999999998764322 2345677899999775433 5789999999999999999 999985
Q ss_pred CCc
Q 004248 748 SSR 750 (766)
Q Consensus 748 ~~~ 750 (766)
...
T Consensus 250 ~~~ 252 (313)
T 1t46_A 250 GMP 252 (313)
T ss_dssp TCC
T ss_pred ccc
Confidence 443
No 170
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=1.4e-34 Score=306.70 Aligned_cols=195 Identities=13% Similarity=0.022 Sum_probs=167.6
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccCHHHHHHHHHHHhhc-CCCCcccceeEEEecCCcEEEEEee
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVKTEAYLLELDFFSKV-SHARLVPLLGHCMERENEKFLVYKY 611 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~~lV~Ey 611 (766)
++|+..+.||+|+||.||+|+. .+|+.||||++.... ..+.+.+|+++++++ +|+|++++++++.. +...++||||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~-~~~~~lv~e~ 87 (298)
T 1csn_A 10 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS-DAPQLRDEYRTYKLLAGCTGIPNVYYFGQE-GLHNVLVIDL 87 (298)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT-TSCCHHHHHHHHHHTTTCTTCCCEEEEEEE-TTEEEEEEEC
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC-ccHHHHHHHHHHHHHhcCCCCCeEEeecCC-CceeEEEEEe
Confidence 5688999999999999999994 679999999986443 234688999999999 79999999997765 5689999999
Q ss_pred CCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCc-----EEeccchh
Q 004248 612 MPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFE-----VRLGSLSE 686 (766)
Q Consensus 612 ~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~-----~kl~DFG~ 686 (766)
+ +|+|.+++...+. .+++.++..++.|++.||+|||+. +|+||||||+||+++.++. +||+|||+
T Consensus 88 ~-~~~L~~~l~~~~~------~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~ 157 (298)
T 1csn_A 88 L-GPSLEDLLDLCGR------KFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGM 157 (298)
T ss_dssp C-CCBHHHHHHHTTT------CCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCTT
T ss_pred c-CCCHHHHHHHhcc------CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEEEECcc
Confidence 9 8999999976432 489999999999999999999998 9999999999999988776 99999999
Q ss_pred hhhcCCC----------CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 687 VCAQGGD----------AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 687 a~~~~~~----------~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
++..... .....+|..|+|||...... ++.++|||||||++|||+||+.||...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---------~~~~~Di~slG~il~el~~g~~pf~~~ 221 (298)
T 1csn_A 158 VKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGRE---------QSRRDDLEALGHVFMYFLRGSLPWQGL 221 (298)
T ss_dssp CEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCC---------CCHHHHHHHHHHHHHHHHHSSCTTSSC
T ss_pred ccccccccccccccccCccCCCCCcccCCchhhcCCC---------CChHHHHHHHHHHHHHHHcCCCCcchh
Confidence 9865322 23456899999999876544 478999999999999999999999653
No 171
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=3.7e-35 Score=309.71 Aligned_cols=200 Identities=20% Similarity=0.348 Sum_probs=172.2
Q ss_pred hCCCCccceeecCCcceEEEEEEc-CCcEEEEEEeeccccCHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEee
Q 004248 533 TGDFSDANLIKNGHSGDLFRGILE-GGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKY 611 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey 611 (766)
.++|+..+.||+|+||.||+|... ++..||||.+.......+++.+|++++++++||||+++++++.. ++..++||||
T Consensus 12 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~~v~e~ 90 (288)
T 3kfa_A 12 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR-EPPFYIITEF 90 (288)
T ss_dssp GGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCSTHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSSEEEEEEC
T ss_pred ccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEcc-CCCEEEEEEc
Confidence 456888899999999999999964 58899999997666557789999999999999999999998765 5679999999
Q ss_pred CCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcC
Q 004248 612 MPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQG 691 (766)
Q Consensus 612 ~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~ 691 (766)
+++|+|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 91 ~~~~~L~~~~~~~~~-----~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~ 162 (288)
T 3kfa_A 91 MTYGNLLDYLRECNR-----QEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMT 162 (288)
T ss_dssp CTTEEHHHHHHHCCT-----TTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCGGGTSC
T ss_pred CCCCcHHHHHHhccc-----CCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCccceecc
Confidence 999999999976433 3589999999999999999999998 99999999999999999999999999998764
Q ss_pred CCC----ccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCCCc
Q 004248 692 GDA----HQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLSSR 750 (766)
Q Consensus 692 ~~~----~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~~~ 750 (766)
... ....+|..|+|||...... ++.++||||+||++|||++ |+.||....
T Consensus 163 ~~~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~Di~slG~il~~ll~~g~~p~~~~~ 217 (288)
T 3kfa_A 163 GDTYTAHAGAKFPIKWTAPESLAYNK---------FSIKSDVWAFGVLLWEIATYGMSPYPGID 217 (288)
T ss_dssp SSSSEEETTEEECGGGCCHHHHHHCC---------CCHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred CCccccccCCccccCcCChhhhccCC---------CCchhhHHHHHHHHHHHHhCCCCCCCCCC
Confidence 332 2234567899999875443 4789999999999999999 999985433
No 172
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=1e-34 Score=315.20 Aligned_cols=200 Identities=19% Similarity=0.204 Sum_probs=171.2
Q ss_pred hCCCCccceeecCCcceEEEEEEcCCcEEEEEEeeccccC------------------HHHHHHHHHHHhhcCCCCcccc
Q 004248 533 TGDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVK------------------TEAYLLELDFFSKVSHARLVPL 594 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~------------------~~~~~~E~~~l~~l~H~niv~l 594 (766)
.++|...+.||+|+||.||+|.. +|+.||||++...... .+.+.+|++++++++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 46799999999999999999998 8999999999754322 1789999999999999999999
Q ss_pred eeEEEecCCcEEEEEeeCCCCChhhh------hhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhcc-CCCCCeEecCCC
Q 004248 595 LGHCMERENEKFLVYKYMPNGDLSSS------LYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHH-ECTLPFVHRDVQ 667 (766)
Q Consensus 595 ~~~~~~~~~~~~lV~Ey~~~GsL~~~------l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~iiHrDlK 667 (766)
++++.. ++..++||||+++|+|.++ +.+.. ...+++..+..++.|++.||+|||+ . +|+|||||
T Consensus 109 ~~~~~~-~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~-----~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~dl~ 179 (348)
T 2pml_X 109 EGIITN-YDEVYIIYEYMENDSILKFDEYFFVLDKNY-----TCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRDVK 179 (348)
T ss_dssp SEEEES-SSEEEEEEECCTTCBSSEESSSEESSCSSS-----CCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCCCC
T ss_pred EEEEee-CCeEEEEEeccCCCcHHHHHHHhhhhhhcc-----ccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecCCC
Confidence 998876 5689999999999999999 54321 2459999999999999999999998 6 99999999
Q ss_pred CCCeeeCCCCcEEeccchhhhhcCC-CCccceeeecccCCCCCCCCceeeeeeeeeccc-ccceecchHHHHHHhcCCCC
Q 004248 668 ASSILLDDKFEVRLGSLSEVCAQGG-DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFT-IFHIYFHGNPLFSAIFNNHL 745 (766)
Q Consensus 668 p~NILl~~~~~~kl~DFG~a~~~~~-~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~-~~Dv~s~Gvvl~elltG~~p 745 (766)
|+||+++.++.+||+|||.++.... ......+|..|+|||....... ++. ++|||||||++|||+||+.|
T Consensus 180 p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~--------~~~~~~Di~slG~il~~l~~g~~p 251 (348)
T 2pml_X 180 PSNILMDKNGRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESS--------YNGAKVDIWSLGICLYVMFYNVVP 251 (348)
T ss_dssp GGGEEECTTSCEEECCCTTCEECBTTEECSSCSCGGGCCGGGGSSCCC--------EEHHHHHHHHHHHHHHHHHHSSCS
T ss_pred hHhEEEcCCCcEEEeccccccccccccccCCCCCcCccCchhhcCCCC--------CCcchhhHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999987532 3344568999999998865421 234 99999999999999999999
Q ss_pred CCCCc
Q 004248 746 NLSSR 750 (766)
Q Consensus 746 ~~~~~ 750 (766)
|....
T Consensus 252 f~~~~ 256 (348)
T 2pml_X 252 FSLKI 256 (348)
T ss_dssp SCCSS
T ss_pred CCCCC
Confidence 96543
No 173
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=100.00 E-value=4.6e-34 Score=307.65 Aligned_cols=275 Identities=18% Similarity=0.266 Sum_probs=213.8
Q ss_pred cCCHHHHHHHHHHHHhCCCC----CCCC----CCCCCCCCCccceeecCCCEEEEEcCCCCcCCCCCCCCccchhhhccC
Q 004248 45 LSSRTELAALFELRSSLGLR----RRDW----PRKVDPCLVWNGVRCQNGSVVGINISGFRRTRLGSQNPRFAADALVNL 116 (766)
Q Consensus 45 ~~~~~~~~aLl~~k~~l~~~----~~~W----~~~~~~C~~W~gv~C~~~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l 116 (766)
.+..+|++||++||+++... ..+| ....+ ||.|.|+.|+... . .-.-...
T Consensus 23 ~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~-~~~~~g~~~~~~~------------------~---~l~~~~~ 80 (328)
T 4fcg_A 23 TALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQ-IETRTGRALKATA------------------D---LLEDATQ 80 (328)
T ss_dssp CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTT-SCCSHHHHHHHHH------------------H---HHHHHTS
T ss_pred ccCchHHHHHHHHHHhccCCchhhhhhhccccccccc-ccccCCcchhhhH------------------H---HHhcccc
Confidence 34567999999999987422 2467 23334 4489999995100 0 0011234
Q ss_pred CCCCEEecCCCCCCCCCchhhhhCCCCCCEEEccCCCCCccCCcccCCCCCCcEEEeecCcCCCCCCccccCCCCCCEEE
Q 004248 117 THLASFNASRFLLPGSIPDWLGQQLPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPSSLGQLSVLSVLD 196 (766)
Q Consensus 117 ~~L~~L~ls~n~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~ 196 (766)
++++.|++++|.+. .+|+.++. +++|++|+|++|.++ .+|..++++++|++|+|++|.++ .+|..+.++++|++|+
T Consensus 81 ~~l~~L~L~~n~l~-~lp~~l~~-l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~ 156 (328)
T 4fcg_A 81 PGRVALELRSVPLP-QFPDQAFR-LSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELS 156 (328)
T ss_dssp TTCCEEEEESSCCS-SCCSCGGG-GTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEE
T ss_pred cceeEEEccCCCch-hcChhhhh-CCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEE
Confidence 66778888888876 78888776 888899999988888 78888888888999999988888 7788888888899999
Q ss_pred ccCCCCCCCCCcccCC---------CCCCCEEeccCCcCCCCCCCCCCCCCCccEEEccCCCCCCCCccccCCCCCCCEE
Q 004248 197 LSRNSLTGNIPTSFGL---------LKNLSSLDISSNYLTGSIPPGLGTLSKLQYLNVSNNSLASSIPAQLGDLDSLVDL 267 (766)
Q Consensus 197 Ls~N~l~~~~p~~~~~---------l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L 267 (766)
|++|++.+.+|..+.. +++|++|+|++|.++ .+|..++++++|++|+|++|++++ +|..++.+++|++|
T Consensus 157 L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L 234 (328)
T 4fcg_A 157 IRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEEL 234 (328)
T ss_dssp EEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEE
T ss_pred CCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEE
Confidence 9888888888887654 888888888888887 778888888888888888888875 56668888888888
Q ss_pred EccCCcCCccCCcccCCCCCCCEEEccCccCccccCCCccCCCCcccEEEccCCCCCCCCCcccCCCCCCCEEEccCCCC
Q 004248 268 DLSMNSLSGSVPSELRGLRSLQKFVIGNNFLSGNLSVNLFPTVSQLQIIVLRQNGFTGPPPDVLWSMPQLRLLDISRNNF 347 (766)
Q Consensus 268 ~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l 347 (766)
+|++|++.+.+|..++++++|++|++++|.+.+.+|..+ ..+++|+.|+|++|++.+.+|..++++++|+.+++..|.+
T Consensus 235 ~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~-~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~ 313 (328)
T 4fcg_A 235 DLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDI-HRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQ 313 (328)
T ss_dssp ECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTG-GGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGS
T ss_pred ECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhh-hcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHH
Confidence 888888888888888888888888888888877777653 6777888888888888888888888888888888877665
Q ss_pred C
Q 004248 348 T 348 (766)
Q Consensus 348 ~ 348 (766)
.
T Consensus 314 ~ 314 (328)
T 4fcg_A 314 A 314 (328)
T ss_dssp C
T ss_pred H
Confidence 4
No 174
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=4.2e-35 Score=316.57 Aligned_cols=205 Identities=20% Similarity=0.301 Sum_probs=161.4
Q ss_pred CCCCccceeecCCcceEEEEEEcCCcEEEEEEeeccccCHHHHHHHHHH--HhhcCCCCcccceeEEEe----cCCcEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDF--FSKVSHARLVPLLGHCME----RENEKFL 607 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~E~~~--l~~l~H~niv~l~~~~~~----~~~~~~l 607 (766)
++|+..+.||+|+||.||+|+. +++.||||++.... .+.+..|.++ +..++||||+++++++.. .....++
T Consensus 13 ~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~--~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~l 89 (336)
T 3g2f_A 13 DNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN--RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLL 89 (336)
T ss_dssp TSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG--HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEE
T ss_pred HHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc--hhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEE
Confidence 5788899999999999999976 68899999997543 3344445444 556899999999975532 1235789
Q ss_pred EEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCC------CCCeEecCCCCCCeeeCCCCcEEe
Q 004248 608 VYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHEC------TLPFVHRDVQASSILLDDKFEVRL 681 (766)
Q Consensus 608 V~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~------~~~iiHrDlKp~NILl~~~~~~kl 681 (766)
||||+++|+|.+++.... .+|..+..++.|+++||+|||+.+ .++|+||||||+|||++.++.+||
T Consensus 90 v~e~~~~g~L~~~l~~~~--------~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL 161 (336)
T 3g2f_A 90 VMEYYPNGSLXKYLSLHT--------SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVI 161 (336)
T ss_dssp EECCCTTCBHHHHHHHCC--------BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEE
T ss_pred EEecCCCCcHHHHHhhcc--------cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEE
Confidence 999999999999996542 589999999999999999999863 238999999999999999999999
Q ss_pred ccchhhhhcCCC-----------CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCCc
Q 004248 682 GSLSEVCAQGGD-----------AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSSR 750 (766)
Q Consensus 682 ~DFG~a~~~~~~-----------~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~~ 750 (766)
+|||+++..... .....||..|+|||...+...... ...++.++|||||||++|||+||+.||+...
T Consensus 162 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~--~~~~~~~~DiwslG~il~ell~g~~p~~~~~ 239 (336)
T 3g2f_A 162 SDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRD--XESALKQVDMYALGLIYWEIFMRCTDLFPGE 239 (336)
T ss_dssp CCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGG--HHHHHHHHHHHHHHHHHHHHHTTBGGGSTTS
T ss_pred eeccceeecccccccCccccccccccCCCccceeCchhhcCCccccc--ccccccccchHHHHHHHHHHHhcCCcCCCcc
Confidence 999999765321 123468999999998765321100 0015789999999999999999988886544
Q ss_pred c
Q 004248 751 F 751 (766)
Q Consensus 751 ~ 751 (766)
.
T Consensus 240 ~ 240 (336)
T 3g2f_A 240 S 240 (336)
T ss_dssp C
T ss_pred c
Confidence 3
No 175
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=3e-35 Score=337.82 Aligned_cols=197 Identities=20% Similarity=0.313 Sum_probs=170.5
Q ss_pred hCCCCccceeecCCcceEEEEEEcCCcEEEEEEeeccccCHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEeeC
Q 004248 533 TGDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYM 612 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey~ 612 (766)
.++|+..+.||+|+||.||+|...++..||||+++......++|.+|+++|++++|||||++++++.+ +..|+|||||
T Consensus 266 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~--~~~~lv~e~~ 343 (535)
T 2h8h_A 266 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE--EPIYIVTEYM 343 (535)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS--SSCEEEECCC
T ss_pred hhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEee--ccceEeeehh
Confidence 35678889999999999999999888899999998766667889999999999999999999998754 5789999999
Q ss_pred CCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcCC
Q 004248 613 PNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGG 692 (766)
Q Consensus 613 ~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~~ 692 (766)
++|+|.++++.... ..+++.++..++.||+.||+|||++ +||||||||+|||+++++.+||+|||+++....
T Consensus 344 ~~gsL~~~l~~~~~-----~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 415 (535)
T 2h8h_A 344 SKGSLLDFLKGETG-----KYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIED 415 (535)
T ss_dssp TTEEHHHHHSHHHH-----TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTSTTTCCC
T ss_pred cCCcHHHHHhhcCC-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEcccccceecCC
Confidence 99999999975321 2489999999999999999999998 999999999999999999999999999986532
Q ss_pred C----CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCC
Q 004248 693 D----AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLS 748 (766)
Q Consensus 693 ~----~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~ 748 (766)
. .....++..|+|||.+.... ++.++|||||||++|||+| |+.||..
T Consensus 416 ~~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~sDvwSlGv~l~el~t~g~~P~~~ 467 (535)
T 2h8h_A 416 NEYTARQGAKFPIKWTAPEAALYGR---------FTIKSDVWSFGILLTELTTKGRVPYPG 467 (535)
T ss_dssp HHHHTTCSTTSCGGGSCHHHHHHCC---------CCHHHHHHHHHHHHHHHTTTTCCSSTT
T ss_pred CceecccCCcCcccccCHHHhccCC---------CCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 1 12234567899999875443 5789999999999999999 9999954
No 176
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=4.8e-35 Score=332.66 Aligned_cols=195 Identities=15% Similarity=0.246 Sum_probs=169.9
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeecccc----CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV----KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLV 608 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~----~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV 608 (766)
++|+..++||+|+||.||+|+. .+|+.||||++..... ..+.+.+|++++++++|||||++++++.+ .+..|+|
T Consensus 26 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~~lv 104 (484)
T 3nyv_A 26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFED-KGYFYLV 104 (484)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEEC-SSEEEEE
T ss_pred CceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEe-CCEEEEE
Confidence 4688899999999999999995 4799999999975432 36789999999999999999999998765 5689999
Q ss_pred EeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeee---CCCCcEEeccch
Q 004248 609 YKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILL---DDKFEVRLGSLS 685 (766)
Q Consensus 609 ~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl---~~~~~~kl~DFG 685 (766)
|||+++|+|.+++.... .+++.++..++.|++.||+|||+. +|+||||||+|||+ +.++.+||+|||
T Consensus 105 ~e~~~~~~L~~~~~~~~-------~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg 174 (484)
T 3nyv_A 105 GEVYTGGELFDEIISRK-------RFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFG 174 (484)
T ss_dssp ECCCCSCBHHHHHHTCS-------CCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCTT
T ss_pred EecCCCCCHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEEEeee
Confidence 99999999999997654 389999999999999999999998 99999999999999 567899999999
Q ss_pred hhhhcCCC--CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 686 EVCAQGGD--AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 686 ~a~~~~~~--~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
+++..... .....+|+.|+|||.+.+ . ++.++||||+||++|||++|+.||...
T Consensus 175 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~---------~~~~~DiwslG~il~~ll~g~~pf~~~ 230 (484)
T 3nyv_A 175 LSTHFEASKKMKDKIGTAYYIAPEVLHG-T---------YDEKCDVWSTGVILYILLSGCPPFNGA 230 (484)
T ss_dssp HHHHBCCCCSHHHHTTGGGTCCHHHHHT-C---------CCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred eeEEcccccccccCCCCccccCceeecC-C---------CCCcceeHHHHHHHHHHHHCCCCCCCC
Confidence 99876433 344578999999998743 2 478999999999999999999999543
No 177
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=2.3e-35 Score=323.53 Aligned_cols=199 Identities=9% Similarity=-0.014 Sum_probs=152.4
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeecccc----CHHHHHHHHHHHhhc--CCCCcccce-------eEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV----KTEAYLLELDFFSKV--SHARLVPLL-------GHCM 599 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~----~~~~~~~E~~~l~~l--~H~niv~l~-------~~~~ 599 (766)
.+|...+.||+|+||.||+|+. .+|+.||||++..... ..+.+.+|+++++.+ +|||||+++ +++.
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~ 141 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVA 141 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEE
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhee
Confidence 3478889999999999999995 5799999999987543 245678885544444 699988755 3332
Q ss_pred ecC----------------CcEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHH------HHHHHHHHHHhhhhccCC
Q 004248 600 ERE----------------NEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITR------LKIAIGAAEGLSYLHHEC 657 (766)
Q Consensus 600 ~~~----------------~~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~------~~i~~~ia~gL~yLH~~~ 657 (766)
... ...|+|||||+ |+|.+++...+. .+++..+ ..++.||+.||+|||++
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~------~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~- 213 (371)
T 3q60_A 142 VQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDF------VYVFRGDEGILALHILTAQLIRLAANLQSK- 213 (371)
T ss_dssp ETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHH------SCCCCHHHHHHHHHHHHHHHHHHHHHHHHT-
T ss_pred cCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhcc------ccchhhhhhhhhHHHHHHHHHHHHHHHHHC-
Confidence 211 23799999999 899999986432 2455566 78889999999999998
Q ss_pred CCCeEecCCCCCCeeeCCCCcEEeccchhhhhcCCCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHH
Q 004248 658 TLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLF 737 (766)
Q Consensus 658 ~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ 737 (766)
+||||||||+|||++.++.+||+|||+++..+.......+|+.|+|||.+...... ++.++|||||||++|
T Consensus 214 --~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~-------~~~~~DiwSlG~il~ 284 (371)
T 3q60_A 214 --GLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTAT-------FTHALNAWQLGLSIY 284 (371)
T ss_dssp --TEEETTCSGGGEEECTTSCEEECCGGGEEETTCEEEGGGSCGGGCCHHHHTCSEEE-------CCHHHHHHHHHHHHH
T ss_pred --CCccCcCCHHHEEECCCCCEEEEecceeeecCCCccCccCCcCCcChhhccCCCCC-------cCccccHHHHHHHHH
Confidence 99999999999999999999999999998776555455677999999988542211 589999999999999
Q ss_pred HHhcCCCCCCCC
Q 004248 738 SAIFNNHLNLSS 749 (766)
Q Consensus 738 elltG~~p~~~~ 749 (766)
||+||+.||...
T Consensus 285 elltg~~Pf~~~ 296 (371)
T 3q60_A 285 RVWCLFLPFGLV 296 (371)
T ss_dssp HHHHSSCSTTBC
T ss_pred HHHhCCCCCCCc
Confidence 999999999655
No 178
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=3.9e-35 Score=308.02 Aligned_cols=205 Identities=20% Similarity=0.242 Sum_probs=168.5
Q ss_pred hCCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC---HHHHHHHHHHHhhcCCCCcccceeEEEe-cCCcEEE
Q 004248 533 TGDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK---TEAYLLELDFFSKVSHARLVPLLGHCME-RENEKFL 607 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~---~~~~~~E~~~l~~l~H~niv~l~~~~~~-~~~~~~l 607 (766)
.++|+..+.||+|+||.||+|+. .+|+.||+|++...... .+.+.+|++++++++||||+++++++.. ..+..++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 35788899999999999999995 57899999999764432 4679999999999999999999998764 3457899
Q ss_pred EEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCC--CCCeEecCCCCCCeeeCCCCcEEeccch
Q 004248 608 VYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHEC--TLPFVHRDVQASSILLDDKFEVRLGSLS 685 (766)
Q Consensus 608 V~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~--~~~iiHrDlKp~NILl~~~~~~kl~DFG 685 (766)
||||+++|+|.+++..... ....+++.++..++.|++.||+|||+.. ..+|+||||||+||+++.++.+||+|||
T Consensus 85 v~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg 161 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTK---ERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFG 161 (279)
T ss_dssp EEECCTTEEHHHHHHHHHH---TTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCC
T ss_pred EEeCCCCCCHHHHHHhhcc---cCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCc
Confidence 9999999999999975321 1234899999999999999999999871 0129999999999999999999999999
Q ss_pred hhhhcCCCC---ccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 686 EVCAQGGDA---HQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 686 ~a~~~~~~~---~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
.++...... ....+|..|+|||...... ++.++|||||||++|||+||+.||...
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~Di~slG~il~~l~~g~~p~~~~ 219 (279)
T 2w5a_A 162 LARILNHDTSFAKTFVGTPYYMSPEQMNRMS---------YNEKSDIWSLGCLLYELCALMPPFTAF 219 (279)
T ss_dssp HHHHC---CHHHHHHHSCCTTCCHHHHHCC----------CCHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred hheeeccccccccccCCCccccChHHhccCC---------CCchhhHHHHHHHHHHHHHCCCCCccc
Confidence 998764332 2346788999999875443 478999999999999999999999643
No 179
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=1.2e-34 Score=307.68 Aligned_cols=198 Identities=19% Similarity=0.282 Sum_probs=167.5
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC---HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK---TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVY 609 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~---~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~ 609 (766)
++|+..+.||+|+||.||+|+. .+|+.||||++...... .+.+.+|++++++++||||+++++++.. ++..++||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~ 81 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT-ENKLYLVF 81 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEE-TTEEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEec-CCceEEEE
Confidence 5788899999999999999996 47899999998654322 4678999999999999999999998776 56899999
Q ss_pred eeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhh
Q 004248 610 KYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCA 689 (766)
Q Consensus 610 Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~ 689 (766)
||++ |+|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 82 e~~~-~~L~~~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~ 152 (299)
T 2r3i_A 82 EFLH-QDLKKFMDASAL-----TGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARA 152 (299)
T ss_dssp ECCS-EEHHHHHHHTTT-----TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECSTTHHHH
T ss_pred Eccc-CCHHHHHHhhhc-----cCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEECcchhhhh
Confidence 9998 699999976532 3489999999999999999999998 999999999999999999999999999987
Q ss_pred cCCC---CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 690 QGGD---AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 690 ~~~~---~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
.+.. .....+|..|+|||....... ++.++|||||||++|||+||+.||...
T Consensus 153 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~--------~~~~~Di~slG~~l~~l~~g~~pf~~~ 207 (299)
T 2r3i_A 153 FGVPVRTYTHEVVTLWYRAPEILLGAKY--------YSTAVDIWSLGCIFAEMVTRRALFPGD 207 (299)
T ss_dssp HCCCSBCTTSCBCCCTTCCHHHHTTCSS--------CCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccCCccccCcccccccccCcHHhhcccc--------CChHHHHHHHHHHHHHHHhCCCCCCCc
Confidence 6432 234467899999998754432 478999999999999999999999543
No 180
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=1.1e-34 Score=330.53 Aligned_cols=195 Identities=16% Similarity=0.224 Sum_probs=164.4
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeecccc---CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV---KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVY 609 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~ 609 (766)
++|+..+.||+|+||.||+|+. .++..||||++..... ..+.+.+|++++++++|||||+++++|.. .+..|+||
T Consensus 37 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~~lv~ 115 (494)
T 3lij_A 37 EMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFED-KRNYYLVM 115 (494)
T ss_dssp HHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEEC-SSEEEEEE
T ss_pred cCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEe-CCEEEEEE
Confidence 4588899999999999999995 5789999999975432 25679999999999999999999998765 56899999
Q ss_pred eeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCC---CcEEeccchh
Q 004248 610 KYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDK---FEVRLGSLSE 686 (766)
Q Consensus 610 Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~---~~~kl~DFG~ 686 (766)
|||++|+|.+.+.... .+++.++..++.||+.||+|||+. +|+||||||+|||++.+ +.+||+|||+
T Consensus 116 e~~~~g~L~~~~~~~~-------~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~ 185 (494)
T 3lij_A 116 ECYKGGELFDEIIHRM-------KFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGL 185 (494)
T ss_dssp ECCCSCBHHHHHHHHS-------SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTT
T ss_pred ecCCCCcHHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEEECCC
Confidence 9999999999987654 389999999999999999999998 99999999999999764 5599999999
Q ss_pred hhhcCC--CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 687 VCAQGG--DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 687 a~~~~~--~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
++.... ......+|+.|+|||.+.. . ++.++||||+||++|||++|+.||...
T Consensus 186 a~~~~~~~~~~~~~gt~~y~aPE~l~~-~---------~~~~~DiwslG~il~~ll~g~~pf~~~ 240 (494)
T 3lij_A 186 SAVFENQKKMKERLGTAYYIAPEVLRK-K---------YDEKCDVWSIGVILFILLAGYPPFGGQ 240 (494)
T ss_dssp CEECBTTBCBCCCCSCTTTCCHHHHTT-C---------BCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred CeECCCCccccccCCCcCeeCHHHHcc-c---------CCCchhHHHHHHHHHHHHhCCCCCCCC
Confidence 987643 2345678999999998642 2 478999999999999999999999543
No 181
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=1.3e-34 Score=306.42 Aligned_cols=198 Identities=15% Similarity=0.124 Sum_probs=166.4
Q ss_pred HhCCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccCHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEe
Q 004248 532 ATGDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYK 610 (766)
Q Consensus 532 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~E 610 (766)
..++|+..+.||+|+||.||+|+. .+++.||||.+..... .+++.+|++++++++|++++..++++...++..++|||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 85 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK-HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME 85 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc-chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEE
Confidence 457899999999999999999995 6789999998754432 34588999999999999999988888766778899999
Q ss_pred eCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeee---CCCCcEEeccchhh
Q 004248 611 YMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILL---DDKFEVRLGSLSEV 687 (766)
Q Consensus 611 y~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl---~~~~~~kl~DFG~a 687 (766)
|+ +|+|.+++.... ..+++.++..++.|++.||+|||+. +|+||||||+|||+ ++++.+||+|||++
T Consensus 86 ~~-~~~L~~~~~~~~------~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a 155 (296)
T 4hgt_A 86 LL-GPSLEDLFNFCS------RKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLA 155 (296)
T ss_dssp CC-CCBHHHHHHHTT------SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECCCTTC
T ss_pred cc-CCCHHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEecCccc
Confidence 99 899999997543 2489999999999999999999998 99999999999999 78899999999999
Q ss_pred hhcCCC----------CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 688 CAQGGD----------AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 688 ~~~~~~----------~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
+..... .....+|..|+|||...... ++.++|||||||++|||+||+.||...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---------~~~~~Di~slG~il~~l~~g~~pf~~~ 218 (296)
T 4hgt_A 156 KKYRDARTHQHIPYRENKNLTGTARYASINTHLGIE---------QSRRDDLESLGYVLMYFNLGSLPWQGL 218 (296)
T ss_dssp EECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCC---------CCHHHHHHHHHHHHHHHHHSSCTTSSC
T ss_pred eeccCcccCccCCCCcccccCCCccccchHHhcCCC---------CCchhHHHHHHHHHHHHhcCCCCCccc
Confidence 865322 12456899999999876544 478999999999999999999999643
No 182
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=8.9e-35 Score=317.99 Aligned_cols=197 Identities=18% Similarity=0.232 Sum_probs=167.5
Q ss_pred hCCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC--HHHHHHHHHHHhhcCCCCcccceeEEEecC----CcE
Q 004248 533 TGDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK--TEAYLLELDFFSKVSHARLVPLLGHCMERE----NEK 605 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~--~~~~~~E~~~l~~l~H~niv~l~~~~~~~~----~~~ 605 (766)
.++|+..+.||+|+||.||+|+. .+++.||||++...... .+++.+|++++++++||||+++++++.... ...
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 105 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV 105 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence 45789999999999999999985 57889999999753322 467999999999999999999999875432 368
Q ss_pred EEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccch
Q 004248 606 FLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLS 685 (766)
Q Consensus 606 ~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG 685 (766)
|+||||++ |+|.+++... .+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 106 ~iv~e~~~-~~L~~~l~~~--------~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg 173 (364)
T 3qyz_A 106 YIVQDLME-TDLYKLLKTQ--------HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFG 173 (364)
T ss_dssp EEEEECCS-EEHHHHHHHC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCT
T ss_pred EEEEcccC-cCHHHHHHhC--------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCc
Confidence 99999998 5999998643 389999999999999999999998 99999999999999999999999999
Q ss_pred hhhhcCCC------CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 686 EVCAQGGD------AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 686 ~a~~~~~~------~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
+++..... .....+|+.|+|||.+..... ++.++||||+||++|||+||+.||...
T Consensus 174 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~--------~~~~~DiwslG~il~ell~g~~pf~~~ 235 (364)
T 3qyz_A 174 LARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG--------YTKSIDIWSVGCILAEMLSNRPIFPGK 235 (364)
T ss_dssp TCEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCS--------CSTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ceEecCCCCCccccccccccccCCCCCHHhcCCCC--------CCcchhHHHHHHHHHHHHHCCCCCCCC
Confidence 99765321 234578999999997644321 578999999999999999999999544
No 183
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=8.3e-35 Score=311.60 Aligned_cols=202 Identities=20% Similarity=0.214 Sum_probs=167.4
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeecccc-CHHHHHHHHHHHhhcCCCCcccceeEEEec---CCcEEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV-KTEAYLLELDFFSKVSHARLVPLLGHCMER---ENEKFLV 608 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~---~~~~~lV 608 (766)
++|+..+.||+|+||.||+|+. .+|+.||||++..... ..+.+.+|++++++++||||+++++++... ....++|
T Consensus 29 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv 108 (317)
T 2buj_A 29 KHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLL 108 (317)
T ss_dssp EEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEE
T ss_pred eEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEE
Confidence 5688999999999999999995 6799999999865433 256799999999999999999999988632 2368999
Q ss_pred EeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhh
Q 004248 609 YKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVC 688 (766)
Q Consensus 609 ~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~ 688 (766)
|||+++|+|.+++..... ....+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 109 ~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~~~ 182 (317)
T 2buj_A 109 LPFFKRGTLWNEIERLKD---KGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSMN 182 (317)
T ss_dssp EECCTTCBHHHHHHHHHT---TTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSSCE
T ss_pred EEeCCCCcHHHHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCcch
Confidence 999999999999975321 113589999999999999999999998 99999999999999999999999999886
Q ss_pred hcCCC------------CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCC
Q 004248 689 AQGGD------------AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNL 747 (766)
Q Consensus 689 ~~~~~------------~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~ 747 (766)
..... .....+|..|+|||.......+. ++.++|||||||++|||++|+.||.
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~------~~~~~Di~slG~il~el~~g~~p~~ 247 (317)
T 2buj_A 183 QACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCV------IDERTDVWSLGCVLYAMMFGEGPYD 247 (317)
T ss_dssp ESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEE------ECTHHHHHHHHHHHHHHHHSSCTTH
T ss_pred hcccccccccccccccccccccCCcccCCHhHhccCCCcC------CCchhhHHHHHHHHHHHHhCCCChh
Confidence 54211 01234688999999876544322 5789999999999999999999984
No 184
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=5.5e-35 Score=322.82 Aligned_cols=199 Identities=21% Similarity=0.238 Sum_probs=169.2
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccCHHHHHHHHHHHhhcC--------CCCcccceeEEEe---c
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVKTEAYLLELDFFSKVS--------HARLVPLLGHCME---R 601 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~--------H~niv~l~~~~~~---~ 601 (766)
++|+..++||+|+||.||+|+. .+++.||||++.......+.+.+|++++++++ ||||+++++++.. .
T Consensus 37 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~~ 116 (397)
T 1wak_A 37 GRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVN 116 (397)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEETT
T ss_pred CeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCCcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCCC
Confidence 6799999999999999999984 67899999999765545678999999999996 7889999997762 2
Q ss_pred CCcEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCC----
Q 004248 602 ENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKF---- 677 (766)
Q Consensus 602 ~~~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~---- 677 (766)
....++||||+ +|+|.+.+.+... ..+++..+..|+.||+.||+|||+++ +|+||||||+|||++.++
T Consensus 117 ~~~~~lv~e~~-~~~l~~~~~~~~~-----~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~~~~~ 188 (397)
T 1wak_A 117 GTHICMVFEVL-GHHLLKWIIKSNY-----QGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNEQYIR 188 (397)
T ss_dssp EEEEEEEECCC-CCBHHHHHHHTTT-----SCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCHHHHH
T ss_pred CceEEEEEecc-CccHHHHHHhccc-----CCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccchhhh
Confidence 34689999999 5677777755432 34899999999999999999999853 799999999999999775
Q ss_pred ---------------------------------------------cEEeccchhhhhcCCCCccceeeecccCCCCCCCC
Q 004248 678 ---------------------------------------------EVRLGSLSEVCAQGGDAHQSRITRLLRLPQSSEQG 712 (766)
Q Consensus 678 ---------------------------------------------~~kl~DFG~a~~~~~~~~~~~~t~~y~aPe~~~~~ 712 (766)
.+||+|||+++..........+|+.|+|||.+...
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~gt~~y~aPE~~~~~ 268 (397)
T 1wak_A 189 RLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGS 268 (397)
T ss_dssp HHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCSCSCCSCGGGCCHHHHHTS
T ss_pred hhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccCccCCCCCcccCChhhcCC
Confidence 79999999998776666667889999999987654
Q ss_pred ceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 713 SSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 713 ~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
. ++.++|||||||++|||+||+.||...
T Consensus 269 ~---------~~~~~DiwslG~il~elltg~~pf~~~ 296 (397)
T 1wak_A 269 G---------YNTPADIWSTACMAFELATGDYLFEPH 296 (397)
T ss_dssp C---------CCTHHHHHHHHHHHHHHHHSSCSCCCC
T ss_pred C---------CCcHHHHHHHHHHHHHHhhCCCCCCCC
Confidence 4 478999999999999999999999643
No 185
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=1.2e-34 Score=317.80 Aligned_cols=195 Identities=17% Similarity=0.196 Sum_probs=158.8
Q ss_pred hCCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC---HHHHHHHHHHHhhcCCCCcccceeEEEecC-----C
Q 004248 533 TGDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK---TEAYLLELDFFSKVSHARLVPLLGHCMERE-----N 603 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~---~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-----~ 603 (766)
.++|+..+.||+|+||.||+|.. .+++.||||++...... .+++.+|++++++++|||||++++++.... .
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 36799999999999999999985 57899999999754322 457899999999999999999999876432 2
Q ss_pred cEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEecc
Q 004248 604 EKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGS 683 (766)
Q Consensus 604 ~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~D 683 (766)
..|+||||++ |+|.+.+.. .+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+|
T Consensus 104 ~~~lv~e~~~-~~l~~~~~~---------~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~D 170 (371)
T 2xrw_A 104 DVYIVMELMD-ANLCQVIQM---------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILD 170 (371)
T ss_dssp EEEEEEECCS-EEHHHHHHS---------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECC
T ss_pred ceEEEEEcCC-CCHHHHHhh---------ccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEE
Confidence 6899999998 588888852 288999999999999999999998 999999999999999999999999
Q ss_pred chhhhhcCCC--CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 684 LSEVCAQGGD--AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 684 FG~a~~~~~~--~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
||+++..+.. .....+|+.|+|||...... ++.++||||+||++|||+||+.||...
T Consensus 171 fg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~---------~~~~~DiwslG~il~el~~g~~pf~~~ 229 (371)
T 2xrw_A 171 FGLARTAGTSFMMTPYVVTRYYRAPEVILGMG---------YKENVDIWSVGCIMGEMIKGGVLFPGT 229 (371)
T ss_dssp CCC----------------CTTCCHHHHTTCC---------CCTTHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred eecccccccccccCCceecCCccCHHHhcCCC---------CCchHhHHHHHHHHHHHHhCCCCCCCC
Confidence 9999876432 34457899999999876543 478999999999999999999999543
No 186
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=7.8e-35 Score=312.76 Aligned_cols=205 Identities=16% Similarity=0.270 Sum_probs=156.0
Q ss_pred HhCCCCccceeecCCcceEEEEEEc-CC---cEEEEEEeecccc---CHHHHHHHHHHHhhcCCCCcccceeEEEecCC-
Q 004248 532 ATGDFSDANLIKNGHSGDLFRGILE-GG---IPVVIKRIDLQSV---KTEAYLLELDFFSKVSHARLVPLLGHCMEREN- 603 (766)
Q Consensus 532 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~g---~~vavK~l~~~~~---~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~- 603 (766)
..++|+..+.||+|+||.||+|+.. ++ ..||||.+..... ..+++.+|++++++++||||+++++++.....
T Consensus 21 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 100 (323)
T 3qup_A 21 PEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAK 100 (323)
T ss_dssp C---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC---
T ss_pred ChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccc
Confidence 3467999999999999999999854 33 3899999975432 25689999999999999999999998865321
Q ss_pred ----cEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcE
Q 004248 604 ----EKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEV 679 (766)
Q Consensus 604 ----~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~ 679 (766)
..++||||+++|+|.+++...... .....+++.++..++.|++.||+|||+. +|+||||||+|||+++++.+
T Consensus 101 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~-~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~~~ 176 (323)
T 3qup_A 101 GRLPIPMVILPFMKHGDLHAFLLASRIG-ENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTV 176 (323)
T ss_dssp ----CEEEEEECCTTCBHHHHHHHHHC----CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCE
T ss_pred cCCCccEEEEEeccCCcHHHHHHhhhcc-ccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCCCE
Confidence 139999999999999999754321 1123589999999999999999999998 99999999999999999999
Q ss_pred EeccchhhhhcCCC-----CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCCC
Q 004248 680 RLGSLSEVCAQGGD-----AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLSS 749 (766)
Q Consensus 680 kl~DFG~a~~~~~~-----~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~~ 749 (766)
||+|||+++..... .....++..|+|||...... ++.++|||||||++|||+| |+.||...
T Consensus 177 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~Di~slG~il~ell~~g~~p~~~~ 243 (323)
T 3qup_A 177 CVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNL---------YTVHSDVWAFGVTMWEIMTRGQTPYAGI 243 (323)
T ss_dssp EECCCCC-----------------CCGGGCCHHHHHHCC---------CCHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred EEeeccccccccccccccccccccCcccccCchhhcCCC---------CCCccchhhHHHHHHHHHhCCCCCcccc
Confidence 99999999765322 12334567899999875443 4789999999999999999 89998543
No 187
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=7.9e-35 Score=307.76 Aligned_cols=198 Identities=19% Similarity=0.313 Sum_probs=157.7
Q ss_pred hCCCCccceeecCCcceEEEEEEcCCcEEEEEEeeccccC---HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEE
Q 004248 533 TGDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVK---TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVY 609 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~---~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~ 609 (766)
.++|...+.||+|+||.||+|+... .||||+++..... .+.|.+|++++++++||||+++++++. .+..++||
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~~--~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~--~~~~~lv~ 98 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST--APQLAIVT 98 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESSS--EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC--SSSCEEEE
T ss_pred ccceeeeeEecCCCCeEEEEEEEcC--ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeecc--CCccEEEE
Confidence 3568889999999999999998543 5999999754433 467999999999999999999999653 45689999
Q ss_pred eeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhh
Q 004248 610 KYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCA 689 (766)
Q Consensus 610 Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~ 689 (766)
||+++|+|.+++.... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 99 e~~~~~~L~~~l~~~~------~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~ 169 (289)
T 3og7_A 99 QWCEGSSLYHHLHASE------TKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATE 169 (289)
T ss_dssp ECCCEEEHHHHHTTC---------CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC----
T ss_pred EecCCCcHHHHHhhcc------CCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccceeccc
Confidence 9999999999996543 2489999999999999999999998 999999999999999999999999999975
Q ss_pred cCC-----CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 690 QGG-----DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 690 ~~~-----~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
... ......+|..|+|||.......+. ++.++|||||||++|||+||+.||...
T Consensus 170 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~------~~~~~Di~slG~il~el~~g~~p~~~~ 228 (289)
T 3og7_A 170 KSRWSGSHQFEQLSGSILWMAPEVIRMQDSNP------YSFQSDVYAFGIVLYELMTGQLPYSNI 228 (289)
T ss_dssp --------------CCCTTCCHHHHC----CC------SCHHHHHHHHHHHHHHHHHSSCTTSSC
T ss_pred cccccccccccccCCCccccCchhhcccCCCC------CCcccchHHHHHHHHHHHHCCCCcccc
Confidence 532 123346899999999875322221 578999999999999999999999643
No 188
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=1e-34 Score=308.09 Aligned_cols=195 Identities=22% Similarity=0.342 Sum_probs=161.7
Q ss_pred CCCCccceeecCCcceEEEEEEcC----CcEEEEEEeecccc--CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGILEG----GIPVVIKRIDLQSV--KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFL 607 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~~~----g~~vavK~l~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~l 607 (766)
..|+..++||+|+||.||+|+..+ +..||||.+..... ..+++.+|++++++++||||++++++|.+.++..++
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 104 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 104 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEE
Confidence 347778999999999999998532 34689999865332 246799999999999999999999988776678899
Q ss_pred EEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhh
Q 004248 608 VYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEV 687 (766)
Q Consensus 608 V~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a 687 (766)
||||+++|+|.+++.... ..+++.++..++.|++.||+|||+. +|+||||||+||++++++.+||+|||++
T Consensus 105 v~e~~~~~~L~~~l~~~~------~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~a 175 (298)
T 3f66_A 105 VLPYMKHGDLRNFIRNET------HNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLA 175 (298)
T ss_dssp EEECCTTCBHHHHHHCTT------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSCGGG
T ss_pred EEeCCCCCCHHHHHHhcc------cCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECccccc
Confidence 999999999999997543 2489999999999999999999998 9999999999999999999999999999
Q ss_pred hhcCCC-------CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCC
Q 004248 688 CAQGGD-------AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLN 746 (766)
Q Consensus 688 ~~~~~~-------~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~ 746 (766)
+..... .....+|..|+|||...... ++.++||||+||++|||+||..|+
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~Di~slG~il~~l~~~~~~~ 232 (298)
T 3f66_A 176 RDMYDKEYYSVHNKTGAKLPVKWMALESLQTQK---------FTTKSDVWSFGVLLWELMTRGAPP 232 (298)
T ss_dssp CCCSCGGGCBC-----CCBCGGGSCHHHHHHCC---------CCHHHHHHHHHHHHHHHHTTSCCS
T ss_pred ccccccchhccccccCCCCCccccChHHhcCCC---------CChHHHHHHHHHHHHHHHhCCCCC
Confidence 765321 22345677899999875433 478999999999999999954444
No 189
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=1.5e-34 Score=315.32 Aligned_cols=208 Identities=14% Similarity=0.146 Sum_probs=160.2
Q ss_pred HHHHHHhCCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccCHHHHHHHHHHHhhcCCCCcccceeEEEecCC--
Q 004248 527 QQLLAATGDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMEREN-- 603 (766)
Q Consensus 527 ~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~-- 603 (766)
++.....++|+..+.||+|+||.||+|+. .+|+.||||++.......+++.+|++.++.++|||||++++++.....
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~ 95 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERD 95 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTTCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSC
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccccHHHHHHHHHHHhcCCCCcccHHHhhhcccccc
Confidence 35567788999999999999999999996 578999999997655555678889999999999999999998865322
Q ss_pred ----cEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhc--cCCCCCeEecCCCCCCeeeCC-C
Q 004248 604 ----EKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLH--HECTLPFVHRDVQASSILLDD-K 676 (766)
Q Consensus 604 ----~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH--~~~~~~iiHrDlKp~NILl~~-~ 676 (766)
..++||||+++ +|.+.+..... ....+++..+..++.|++.||+||| +. +|+||||||+|||++. +
T Consensus 96 ~~~~~~~lv~e~~~~-~l~~~~~~~~~---~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~~~ 168 (360)
T 3e3p_A 96 RRDIYLNVVMEYVPD-TLHRCCRNYYR---RQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNEAD 168 (360)
T ss_dssp TTCEEEEEEEECCSC-BHHHHHHHHHT---TTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEETTT
T ss_pred ccceeEEEEeecccc-cHHHHHHHHhh---cccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeCCC
Confidence 27899999986 66555442111 1134899999999999999999999 65 9999999999999996 8
Q ss_pred CcEEeccchhhhhcCC--CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 677 FEVRLGSLSEVCAQGG--DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 677 ~~~kl~DFG~a~~~~~--~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
+.+||+|||+++.... ......+|+.|+|||.+..... ++.++|||||||++|||+||+.||...
T Consensus 169 ~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~--------~~~~~Di~slG~il~ell~g~~pf~~~ 235 (360)
T 3e3p_A 169 GTLKLCDFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQH--------YTTAVDIWSVGCIFAEMMLGEPIFRGD 235 (360)
T ss_dssp TEEEECCCTTCBCCCTTSCCCSTTSCGGGCCHHHHTTCSS--------CCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred CcEEEeeCCCceecCCCCCcccccCCcceeCHHHHcCCCC--------CCcHHHHHHHHHHHHHHHhCCCCcCCC
Confidence 9999999999987633 2334568999999998754332 578999999999999999999999643
No 190
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=7.5e-35 Score=309.56 Aligned_cols=195 Identities=21% Similarity=0.350 Sum_probs=164.2
Q ss_pred CCCCccceeecCCcceEEEEEE-----cCCcEEEEEEeecccc--CHHHHHHHHHHHhhcCCCCcccceeEEEecC-CcE
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-----EGGIPVVIKRIDLQSV--KTEAYLLELDFFSKVSHARLVPLLGHCMERE-NEK 605 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-----~~g~~vavK~l~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~~ 605 (766)
+.|+..+.||+|+||.||+|+. .+++.||||++..... ..+++.+|++++++++||||+++++++...+ +..
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 100 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 100 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence 3478889999999999999983 4689999999975432 2578999999999999999999999887532 468
Q ss_pred EEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccch
Q 004248 606 FLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLS 685 (766)
Q Consensus 606 ~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG 685 (766)
++||||+++|+|.+++..... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 101 ~lv~e~~~~~~L~~~l~~~~~------~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg 171 (302)
T 4e5w_A 101 KLIMEFLPSGSLKEYLPKNKN------KINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFG 171 (302)
T ss_dssp EEEEECCTTCBHHHHHHHHTT------TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCT
T ss_pred EEEEEeCCCCcHHHHHHhccc------cCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECccc
Confidence 999999999999999965432 489999999999999999999998 99999999999999999999999999
Q ss_pred hhhhcCCC------CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCC
Q 004248 686 EVCAQGGD------AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLN 746 (766)
Q Consensus 686 ~a~~~~~~------~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~ 746 (766)
+++..... .....+|..|+|||...... ++.++||||+||++|||+||+.|+
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~Di~slG~il~~l~~g~~p~ 229 (302)
T 4e5w_A 172 LTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSK---------FYIASDVWSFGVTLHELLTYCDSD 229 (302)
T ss_dssp TCEECCTTCCEEECCCCTTCCGGGCCHHHHHHCE---------EEHHHHHHHHHHHHHHHHTTTCGG
T ss_pred ccccccCCCcceeccCCCCCCccccCCeeecCCC---------CCcchhHHHHHHHHHHHHHccCCC
Confidence 99866432 22345677899999875443 468999999999999999999886
No 191
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=2.8e-34 Score=305.53 Aligned_cols=195 Identities=22% Similarity=0.289 Sum_probs=170.0
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeecccc--CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEe
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV--KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYK 610 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~E 610 (766)
+.|+..+.||+|+||.||+|+. .+++.||||.+..... ..+.+.+|++++++++||||+++++++.. ++..++|||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e 100 (303)
T 3a7i_A 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLK-DTKLWIIME 100 (303)
T ss_dssp GTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEE-TTEEEEEEE
T ss_pred HHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEec-CCeEEEEEE
Confidence 4588899999999999999985 5789999999976543 35789999999999999999999998876 568999999
Q ss_pred eCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhc
Q 004248 611 YMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQ 690 (766)
Q Consensus 611 y~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~ 690 (766)
|+++|+|.+++... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 101 ~~~~~~L~~~~~~~--------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~ 169 (303)
T 3a7i_A 101 YLGGGSALDLLEPG--------PLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQL 169 (303)
T ss_dssp CCTTEEHHHHHTTS--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred eCCCCcHHHHHhcC--------CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeecccceec
Confidence 99999999998642 389999999999999999999998 9999999999999999999999999999765
Q ss_pred CCC---CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 691 GGD---AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 691 ~~~---~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
... .....+|..|+|||...... ++.++|||||||++|||+||+.||...
T Consensus 170 ~~~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~Di~slG~il~~l~~g~~p~~~~ 222 (303)
T 3a7i_A 170 TDTQIKRNTFVGTPFWMAPEVIKQSA---------YDSKADIWSLGITAIELARGEPPHSEL 222 (303)
T ss_dssp BTTBCCBCCCCSCGGGCCHHHHTTCC---------BCTHHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred CccccccCccCCCcCccCHHHHhcCC---------CCchhhhHHHHHHHHHHccCCCCCCCc
Confidence 332 23456889999999876543 478999999999999999999999543
No 192
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=1.2e-34 Score=312.20 Aligned_cols=200 Identities=15% Similarity=0.151 Sum_probs=166.9
Q ss_pred HhCCCCcc-ceeecCCcceEEEEEE-cCCcEEEEEEeecccc---CHHHHHHHHHHHhhcC-CCCcccceeEEEecCCcE
Q 004248 532 ATGDFSDA-NLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV---KTEAYLLELDFFSKVS-HARLVPLLGHCMERENEK 605 (766)
Q Consensus 532 ~~~~~~~~-~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~ 605 (766)
..+.|... +.||+|+||.||+|.. .+|+.||||++..... ..+++.+|++++++++ ||||+++++++.. .+..
T Consensus 26 ~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~-~~~~ 104 (327)
T 3lm5_A 26 FNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYEN-TSEI 104 (327)
T ss_dssp HHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-SSEE
T ss_pred hhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEe-CCeE
Confidence 34456666 8899999999999995 4699999999975432 2578999999999995 6999999998765 5689
Q ss_pred EEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCC---CCcEEec
Q 004248 606 FLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDD---KFEVRLG 682 (766)
Q Consensus 606 ~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~---~~~~kl~ 682 (766)
++||||+++|+|.+++..... ..+++.++..++.|++.||+|||+. +|+||||||+||+++. ++.+||+
T Consensus 105 ~lv~e~~~~~~L~~~~~~~~~-----~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~~~~~~kL~ 176 (327)
T 3lm5_A 105 ILILEYAAGGEIFSLCLPELA-----EMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDIKIV 176 (327)
T ss_dssp EEEEECCTTEEGGGGGSSCC------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBTTBCCEEEC
T ss_pred EEEEEecCCCcHHHHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCCCCCcEEEe
Confidence 999999999999999865322 3589999999999999999999998 9999999999999998 7899999
Q ss_pred cchhhhhcCCC--CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 683 SLSEVCAQGGD--AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 683 DFG~a~~~~~~--~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
|||+++..... .....+|+.|+|||...... ++.++|||||||++|||+||+.||...
T Consensus 177 Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~---------~~~~~DiwslG~il~~ll~g~~pf~~~ 236 (327)
T 3lm5_A 177 DFGMSRKIGHACELREIMGTPEYLAPEILNYDP---------ITTATDMWNIGIIAYMLLTHTSPFVGE 236 (327)
T ss_dssp CGGGCEEC---------CCCGGGCCHHHHTTCC---------CCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred eCccccccCCccccccccCCcCccCCeeecCCC---------CCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 99999876432 34457899999999876543 478999999999999999999999543
No 193
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=1.3e-34 Score=317.43 Aligned_cols=196 Identities=17% Similarity=0.238 Sum_probs=163.3
Q ss_pred hCCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC---HHHHHHHHHHHhhcCCCCcccceeEEEecCC-----
Q 004248 533 TGDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK---TEAYLLELDFFSKVSHARLVPLLGHCMEREN----- 603 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~---~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~----- 603 (766)
.++|...+.||+|+||.||+|.. .+|+.||||++...... .+++.+|++++++++||||+++++++.....
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 120 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 120 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence 46788999999999999999985 57999999999754332 4678999999999999999999998765321
Q ss_pred cEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEecc
Q 004248 604 EKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGS 683 (766)
Q Consensus 604 ~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~D 683 (766)
..|+||||++ |+|.+++.. .+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+|
T Consensus 121 ~~~lv~e~~~-~~l~~~~~~---------~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~D 187 (371)
T 4exu_A 121 DFYLVMPFMQ-TDLQKIMGM---------EFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILD 187 (371)
T ss_dssp CCEEEEECCC-EEHHHHTTS---------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECS
T ss_pred eEEEEEcccc-ccHHHHhhc---------CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEe
Confidence 2399999998 688888732 389999999999999999999998 999999999999999999999999
Q ss_pred chhhhhcCCCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 684 LSEVCAQGGDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 684 FG~a~~~~~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
||+++..+.......+|+.|+|||.+..... ++.++|||||||++|||+||+.||...
T Consensus 188 fg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~--------~~~~~DiwslG~il~el~~g~~pf~~~ 245 (371)
T 4exu_A 188 FGLARHADAEMTGYVVTRWYRAPEVILSWMH--------YNQTVDIWSVGCIMAEMLTGKTLFKGK 245 (371)
T ss_dssp TTCC--------CTTCCCTTSCHHHHSCCSC--------CCTTHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred cCcccccccCcCCcccCccccCHHHhcCCCC--------CCcHHhHHHHHHHHHHHHhCCCCCCCC
Confidence 9999877666666778999999998754221 578999999999999999999999643
No 194
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=6.4e-35 Score=312.07 Aligned_cols=215 Identities=17% Similarity=0.213 Sum_probs=175.1
Q ss_pred ccHHHHHHHhCCCCccceeecCCcceEEEEEE------cCCcEEEEEEeeccccC--HHHHHHHHHHHhhc-CCCCcccc
Q 004248 524 FTYQQLLAATGDFSDANLIKNGHSGDLFRGIL------EGGIPVVIKRIDLQSVK--TEAYLLELDFFSKV-SHARLVPL 594 (766)
Q Consensus 524 ~~~~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~------~~g~~vavK~l~~~~~~--~~~~~~E~~~l~~l-~H~niv~l 594 (766)
+...++.-..++|...+.||+|+||.||+|+. .+++.||||++...... .+.+.+|+++++++ +||||+++
T Consensus 17 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~ 96 (316)
T 2xir_A 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 96 (316)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred ccccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeE
Confidence 34444444567899999999999999999983 35689999999754432 45799999999999 79999999
Q ss_pred eeEEEecCCcEEEEEeeCCCCChhhhhhccCCCC---------CcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecC
Q 004248 595 LGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTE---------DDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRD 665 (766)
Q Consensus 595 ~~~~~~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~---------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrD 665 (766)
++++...++..++||||+++|+|.+++....... .....+++.++..++.|++.||+|||+. +|+|||
T Consensus 97 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~d 173 (316)
T 2xir_A 97 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRD 173 (316)
T ss_dssp EEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCCCSC
T ss_pred EEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---Cccccc
Confidence 9988765556899999999999999997653210 0012389999999999999999999998 999999
Q ss_pred CCCCCeeeCCCCcEEeccchhhhhcCCCC-----ccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHh
Q 004248 666 VQASSILLDDKFEVRLGSLSEVCAQGGDA-----HQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAI 740 (766)
Q Consensus 666 lKp~NILl~~~~~~kl~DFG~a~~~~~~~-----~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ell 740 (766)
|||+||+++.++.+||+|||+++...... ....+|..|+|||...... ++.++|||||||++|||+
T Consensus 174 ikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~---------~~~~~Di~slG~il~~l~ 244 (316)
T 2xir_A 174 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRV---------YTIQSDVWSFGVLLWEIF 244 (316)
T ss_dssp CSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCC---------CCHHHHHHHHHHHHHHHH
T ss_pred CccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhcccc---------ccchhHHHHHHHHHHHHH
Confidence 99999999999999999999998653221 2345678899999875433 478999999999999999
Q ss_pred c-CCCCCCCCc
Q 004248 741 F-NNHLNLSSR 750 (766)
Q Consensus 741 t-G~~p~~~~~ 750 (766)
| |+.||....
T Consensus 245 t~g~~p~~~~~ 255 (316)
T 2xir_A 245 SLGASPYPGVK 255 (316)
T ss_dssp TTSCCSSTTCC
T ss_pred hCCCCCCcccc
Confidence 8 999995443
No 195
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=2.3e-34 Score=304.80 Aligned_cols=197 Identities=15% Similarity=0.124 Sum_probs=169.5
Q ss_pred hCCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccCHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEee
Q 004248 533 TGDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKY 611 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey 611 (766)
.++|+..+.||+|+||.||+|+. .+|+.||||++..... .+++.+|++++++++|++++..+.++...++..++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~ 86 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK-HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMEL 86 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS-CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc-hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEe
Confidence 46789999999999999999995 7799999999865443 346899999999999999888888777666788999999
Q ss_pred CCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeee---CCCCcEEeccchhhh
Q 004248 612 MPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILL---DDKFEVRLGSLSEVC 688 (766)
Q Consensus 612 ~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl---~~~~~~kl~DFG~a~ 688 (766)
+ +|+|.+++.... ..+++.++..++.|++.||+|||++ +|+||||||+||++ ++++.+||+|||+++
T Consensus 87 ~-~~~L~~~~~~~~------~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~ 156 (296)
T 3uzp_A 87 L-GPSLEDLFNFCS------RKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 156 (296)
T ss_dssp C-CCBHHHHHHHTT------TCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCTTCE
T ss_pred c-CCCHHHHHHhhc------cCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeCCCcc
Confidence 9 899999997433 2489999999999999999999998 99999999999999 488999999999998
Q ss_pred hcCCC----------CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 689 AQGGD----------AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 689 ~~~~~----------~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
..... .....+|..|+|||...... ++.++|||||||++|||+||+.||...
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---------~~~~~Di~slG~il~~l~~g~~pf~~~ 218 (296)
T 3uzp_A 157 KYRDARTHQHIPYRENKNLTGTARYASINTHLGIE---------QSRRDDLESLGYVLMYFNLGSLPWQGL 218 (296)
T ss_dssp ECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCC---------CCHHHHHHHHHHHHHHHHHSSCTTSSC
T ss_pred cccccccccccccccccccccccccCChhhhcCCC---------CCcchhhHHHHHHHHHHHhCCCCCCCc
Confidence 65322 23456899999999876544 478999999999999999999999643
No 196
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=1.8e-34 Score=311.74 Aligned_cols=203 Identities=13% Similarity=0.261 Sum_probs=167.0
Q ss_pred CCCCccceeecCCcceEEEEEE--------cCCcEEEEEEeeccccC--HHHHHHHHHHHhhc-CCCCcccceeEEEecC
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL--------EGGIPVVIKRIDLQSVK--TEAYLLELDFFSKV-SHARLVPLLGHCMERE 602 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~--------~~g~~vavK~l~~~~~~--~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~ 602 (766)
++|...+.||+|+||.||+|+. .+++.||||++...... .+++.+|+++++++ +||||+++++++.. +
T Consensus 35 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~-~ 113 (334)
T 2pvf_A 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ-D 113 (334)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-S
T ss_pred hHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEcc-C
Confidence 5688899999999999999985 34678999999754322 46799999999999 89999999998765 5
Q ss_pred CcEEEEEeeCCCCChhhhhhccCCCC---------CcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeee
Q 004248 603 NEKFLVYKYMPNGDLSSSLYRKTNTE---------DDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILL 673 (766)
Q Consensus 603 ~~~~lV~Ey~~~GsL~~~l~~~~~~~---------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl 673 (766)
+..++||||+++|+|.+++....... .....+++.++..++.|++.||+|||+. +|+||||||+||++
T Consensus 114 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll 190 (334)
T 2pvf_A 114 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLV 190 (334)
T ss_dssp SCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEE
T ss_pred CceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCccceEEE
Confidence 68999999999999999997653210 0113489999999999999999999998 99999999999999
Q ss_pred CCCCcEEeccchhhhhcCCC-----CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCC
Q 004248 674 DDKFEVRLGSLSEVCAQGGD-----AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNL 747 (766)
Q Consensus 674 ~~~~~~kl~DFG~a~~~~~~-----~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~ 747 (766)
+.++.+||+|||+++..... .....+|..|+|||...... ++.++|||||||++|||+| |+.||.
T Consensus 191 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~Di~slG~il~ellt~g~~p~~ 261 (334)
T 2pvf_A 191 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRV---------YTHQSDVWSFGVLMWEIFTLGGSPYP 261 (334)
T ss_dssp CTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCE---------ECHHHHHHHHHHHHHHHHTTSCCSST
T ss_pred cCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCC---------cChHHHHHHHHHHHHHHHhCCCCCcC
Confidence 99999999999999865332 22334577899999875432 5789999999999999999 999995
Q ss_pred CC
Q 004248 748 SS 749 (766)
Q Consensus 748 ~~ 749 (766)
..
T Consensus 262 ~~ 263 (334)
T 2pvf_A 262 GI 263 (334)
T ss_dssp TC
T ss_pred cC
Confidence 43
No 197
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=1e-34 Score=320.86 Aligned_cols=198 Identities=19% Similarity=0.208 Sum_probs=160.8
Q ss_pred CCCCccceeecCCcceEEEEEEcCCcEEEEEEeeccccCHHHHHHHHHHHhhcCCCCcccceeEEEecCC-----cEEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMEREN-----EKFLV 608 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~-----~~~lV 608 (766)
.+|...++||+|+||.||+|+...+..||+|++..... ...+|++++++++|||||++++++..... ..++|
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~---~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv 116 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR---FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLV 116 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT---SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc---hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEE
Confidence 45888999999999999999987777799999864432 22369999999999999999998865322 27899
Q ss_pred EeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeC-CCCcEEeccchhh
Q 004248 609 YKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLD-DKFEVRLGSLSEV 687 (766)
Q Consensus 609 ~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~-~~~~~kl~DFG~a 687 (766)
|||+++ ++.+.+..... ....+++..+..++.|+++||+|||+. +|+||||||+|||++ .++.+||+|||+|
T Consensus 117 ~e~~~~-~l~~~~~~~~~---~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG~a 189 (394)
T 4e7w_A 117 LEYVPE-TVYRASRHYAK---LKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGSA 189 (394)
T ss_dssp EECCSE-EHHHHHHHHHH---TTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTC
T ss_pred eeccCc-cHHHHHHHHHh---hcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCCCc
Confidence 999986 44444332110 013489999999999999999999998 999999999999999 7999999999999
Q ss_pred hhc--CCCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 688 CAQ--GGDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 688 ~~~--~~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
+.. +.......+|+.|+|||.+.+... ++.++||||+||++|||++|+.||...
T Consensus 190 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~--------~~~~~DiwSlG~il~ell~g~~pf~~~ 245 (394)
T 4e7w_A 190 KILIAGEPNVSYICSRYYRAPELIFGATN--------YTTNIDIWSTGCVMAELMQGQPLFPGE 245 (394)
T ss_dssp EECCTTCCCCSSCSCGGGCCHHHHTTCSS--------CCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ccccCCCCCcccccCcCccCHHHHcCCCC--------CCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 865 233445678999999998754332 578999999999999999999999543
No 198
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=7.1e-33 Score=314.13 Aligned_cols=281 Identities=22% Similarity=0.196 Sum_probs=238.7
Q ss_pred CCCCEEecCCCCCCCCCchhhhhCCCCCCEEEccCCCCCccCCcccCCCCCCcEEEeecCcCCCCCCccccCCCCCCEEE
Q 004248 117 THLASFNASRFLLPGSIPDWLGQQLPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPSSLGQLSVLSVLD 196 (766)
Q Consensus 117 ~~L~~L~ls~n~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~ 196 (766)
++++.|++++|.+.+-.|..+.. +++|++|+|++|.+++..|..|.++++|++|+|++|++++..+..|.++++|++|+
T Consensus 32 ~~l~~L~L~~n~l~~~~~~~~~~-l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 110 (477)
T 2id5_A 32 TETRLLDLGKNRIKTLNQDEFAS-FPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLD 110 (477)
T ss_dssp TTCSEEECCSSCCCEECTTTTTT-CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEE
T ss_pred CCCcEEECCCCccceECHhHccC-CCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEE
Confidence 46889999999988766666654 89999999999999988888999999999999999999876666788999999999
Q ss_pred ccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCCCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCc
Q 004248 197 LSRNSLTGNIPTSFGLLKNLSSLDISSNYLTGSIPPGLGTLSKLQYLNVSNNSLASSIPAQLGDLDSLVDLDLSMNSLSG 276 (766)
Q Consensus 197 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g 276 (766)
|++|++++..|..|.++++|+.|+|++|.+++..|..|.++++|+.|+|++|++++..+..+.++++|+.|+|++|.+.+
T Consensus 111 Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~ 190 (477)
T 2id5_A 111 ISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINA 190 (477)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCE
T ss_pred CCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcE
Confidence 99999998888889999999999999999988888889999999999999999988777778899999999999999998
Q ss_pred cCCcccCCCCCCCEEEccCccCccccCCCccCCCCcccEEEccCCCCCCCCCcccCCCCCCCEEEccCCCCCCCCCcccc
Q 004248 277 SVPSELRGLRSLQKFVIGNNFLSGNLSVNLFPTVSQLQIIVLRQNGFTGPPPDVLWSMPQLRLLDISRNNFTGPLPNSRS 356 (766)
Q Consensus 277 ~~p~~l~~l~~L~~L~ls~N~l~g~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~ 356 (766)
..+..|..+++|+.|++++|.+.+.++...+.. .+|+.|+|++|+++..++..+..+++|+.|+|++|++++..+ ..+
T Consensus 191 ~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~-~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~-~~~ 268 (477)
T 2id5_A 191 IRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYG-LNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEG-SML 268 (477)
T ss_dssp ECTTCSCSCTTCCEEEEECCTTCCEECTTTTTT-CCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECT-TSC
T ss_pred eChhhcccCcccceeeCCCCccccccCcccccC-ccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccCh-hhc
Confidence 888889999999999999988888888776543 489999999999988777788899999999999999885544 344
Q ss_pred cCCCCCcEEEccCCcCccCCCc---CCCCCCEEeccCCcCccccChh
Q 004248 357 NVNTSTVELNISQNMFYGGLTP---VLGRFRLVDLSGNYFEGRVPEY 400 (766)
Q Consensus 357 ~~~~~l~~L~ls~N~l~g~~~~---~l~~l~~ldLs~N~l~g~~p~~ 400 (766)
..+.+|+.|++++|.+.+..|. .+++|+.|||++|++++..+..
T Consensus 269 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 315 (477)
T 2id5_A 269 HELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESV 315 (477)
T ss_dssp TTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGG
T ss_pred cccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhH
Confidence 6678899999999988876654 4578889999999998754443
No 199
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.4e-34 Score=311.77 Aligned_cols=196 Identities=18% Similarity=0.294 Sum_probs=160.3
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcE----EEEEEeecccc--CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIP----VVIKRIDLQSV--KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKF 606 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~----vavK~l~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~ 606 (766)
++|+..++||+|+||.||+|.. .+++. ||+|.+..... ..+++.+|++++++++||||+++++++.. +..+
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~~ 92 (327)
T 3lzb_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT--STVQ 92 (327)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEES--SSEE
T ss_pred hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEec--CCce
Confidence 5788999999999999999984 45544 57777754322 36789999999999999999999998875 3589
Q ss_pred EEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchh
Q 004248 607 LVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSE 686 (766)
Q Consensus 607 lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~ 686 (766)
+|+||+++|+|.+++..... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 93 ~v~~~~~~g~L~~~l~~~~~------~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~DfG~ 163 (327)
T 3lzb_A 93 LITQLMPFGCLLDYVREHKD------NIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGL 163 (327)
T ss_dssp EEECCCSSCBHHHHHHHTTT------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTC
T ss_pred EEEEecCCCcHHHHHHhcCC------CCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEccCcc
Confidence 99999999999999976542 489999999999999999999998 999999999999999999999999999
Q ss_pred hhhcCCC-----CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCCC
Q 004248 687 VCAQGGD-----AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLSS 749 (766)
Q Consensus 687 a~~~~~~-----~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~~ 749 (766)
++..... .....+|..|+|||...... ++.++|||||||++|||+| |+.||...
T Consensus 164 a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~---------~~~~~Di~slG~il~ell~~g~~p~~~~ 223 (327)
T 3lzb_A 164 AKLLGAEEKEYHAEGGKVPIKWMALESILHRI---------YTHQSDVWSYGVTVWELMTFGSKPYDGI 223 (327)
T ss_dssp ----------------CCCGGGSCHHHHHHCC---------CCHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred eeEccCccccccccCCCccccccCHHHHcCCC---------CChHHHHHHHHHHHHHHHHCCCCCCCCC
Confidence 9865322 12234567899999876443 4789999999999999999 99999643
No 200
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=2e-34 Score=310.98 Aligned_cols=197 Identities=14% Similarity=0.156 Sum_probs=170.6
Q ss_pred CCCCccceeecCCcceEEEEEE--cCCcEEEEEEeeccccCHHHHHHHHHHHhhcCCCC------cccceeEEEecCCcE
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL--EGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHAR------LVPLLGHCMERENEK 605 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~--~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~H~n------iv~l~~~~~~~~~~~ 605 (766)
++|+..+.||+|+||.||+|.. .+++.||||+++......+.+.+|++++++++|++ ++++++++.. ++..
T Consensus 14 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~-~~~~ 92 (339)
T 1z57_A 14 ARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEH-HGHI 92 (339)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEE-TTEE
T ss_pred CceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCCchhHHHHHHHHHHHHhhhcCCCCceeeEeeeccccc-CCcE
Confidence 5788999999999999999985 46899999999765444678899999999987665 9999997765 5689
Q ss_pred EEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCC----------
Q 004248 606 FLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDD---------- 675 (766)
Q Consensus 606 ~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~---------- 675 (766)
++||||+ +|+|.+++..... ..+++.++..++.|++.||+|||+. +|+||||||+|||++.
T Consensus 93 ~lv~e~~-~~~l~~~l~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~~~ 163 (339)
T 1z57_A 93 CIVFELL-GLSTYDFIKENGF-----LPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPK 163 (339)
T ss_dssp EEEEECC-CCBHHHHHHHTTT-----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEEEEC--
T ss_pred EEEEcCC-CCCHHHHHHhcCC-----CCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeccccccccCCc
Confidence 9999999 7899999976542 3489999999999999999999998 9999999999999987
Q ss_pred ---------CCcEEeccchhhhhcCCCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCC
Q 004248 676 ---------KFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLN 746 (766)
Q Consensus 676 ---------~~~~kl~DFG~a~~~~~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~ 746 (766)
++.+||+|||+++..........+|+.|+|||...... ++.++|||||||++|||+||+.||
T Consensus 164 ~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~---------~~~~~Di~slG~il~el~~g~~pf 234 (339)
T 1z57_A 164 IKRDERTLINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALG---------WSQPCDVWSIGCILIEYYLGFTVF 234 (339)
T ss_dssp --CEEEEESCCCEEECCCSSCEETTSCCCSSCSCGGGCCHHHHTTSC---------CCTHHHHHHHHHHHHHHHHSSCSC
T ss_pred cccccccccCCCceEeeCcccccCccccccccCCccccChHHhhCCC---------CCcchhhHHHHHHHHHHHhCCCCC
Confidence 67899999999987766666667899999999876543 478999999999999999999999
Q ss_pred CCC
Q 004248 747 LSS 749 (766)
Q Consensus 747 ~~~ 749 (766)
...
T Consensus 235 ~~~ 237 (339)
T 1z57_A 235 PTH 237 (339)
T ss_dssp CCS
T ss_pred CCC
Confidence 543
No 201
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.1e-34 Score=304.03 Aligned_cols=195 Identities=21% Similarity=0.317 Sum_probs=162.2
Q ss_pred CCccceeecCCcceEEEEEE-cCC---cEEEEEEeecccc--CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEE
Q 004248 536 FSDANLIKNGHSGDLFRGIL-EGG---IPVVIKRIDLQSV--KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVY 609 (766)
Q Consensus 536 ~~~~~~ig~G~~g~Vy~~~~-~~g---~~vavK~l~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~ 609 (766)
|...++||+|+||.||+|.. .++ ..||+|.+..... ..+.|.+|++++++++||||+++++++.+.+...++||
T Consensus 23 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~ 102 (298)
T 3pls_A 23 THSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLL 102 (298)
T ss_dssp EEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEE
T ss_pred EccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEE
Confidence 44568999999999999984 333 3799999865332 24679999999999999999999998876444559999
Q ss_pred eeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhh
Q 004248 610 KYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCA 689 (766)
Q Consensus 610 Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~ 689 (766)
||+.+|+|.+++.... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 103 e~~~~~~L~~~~~~~~------~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~ 173 (298)
T 3pls_A 103 PYMCHGDLLQFIRSPQ------RNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARD 173 (298)
T ss_dssp CCCTTCBHHHHHHCTT------CCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTTSSCT
T ss_pred ecccCCCHHHHHhccc------cCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCCCccc
Confidence 9999999999997633 2489999999999999999999998 999999999999999999999999999975
Q ss_pred cCC-------CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 690 QGG-------DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 690 ~~~-------~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
... ......++..|+|||...... ++.++|||||||++|||+||+.|++.
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~Di~slG~il~~l~~g~~~~~~ 230 (298)
T 3pls_A 174 ILDREYYSVQQHRHARLPVKWTALESLQTYR---------FTTKSDVWSFGVLLWELLTRGAPPYR 230 (298)
T ss_dssp TTTGGGGCSCCSSCTTCGGGGSCHHHHTTCC---------CCHHHHHHHHHHHHHHHHHTSCCTTT
T ss_pred ccCCcccccccCcCCCCCccccChhhhccCC---------CChhhchhhHHHHHHHHhhCCCCCCc
Confidence 422 223345678899999876543 47899999999999999997666543
No 202
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=3e-34 Score=303.78 Aligned_cols=200 Identities=19% Similarity=0.241 Sum_probs=167.6
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC-HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEee
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK-TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKY 611 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~-~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey 611 (766)
++|....+||+|+||.||+|.. .+++.||||.+...... .+.+.+|++++++++||||+++++++.. .+..++||||
T Consensus 22 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e~ 100 (295)
T 2clq_A 22 DENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSE-NGFIKIFMEQ 100 (295)
T ss_dssp CTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEE-TTEEEEEEEC
T ss_pred cCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEe-CCcEEEEEEe
Confidence 3456667999999999999995 67899999999765433 5779999999999999999999998866 5689999999
Q ss_pred CCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCC-CCcEEeccchhhhhc
Q 004248 612 MPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDD-KFEVRLGSLSEVCAQ 690 (766)
Q Consensus 612 ~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~-~~~~kl~DFG~a~~~ 690 (766)
+++|+|.+++..... ...+++..+..++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||+++..
T Consensus 101 ~~~~~L~~~l~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~ 173 (295)
T 2clq_A 101 VPGGSLSALLRSKWG----PLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRL 173 (295)
T ss_dssp CSEEEHHHHHHHTTC----CCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCEES
T ss_pred CCCCCHHHHHHhhcc----CCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeeccccccc
Confidence 999999999976432 12467999999999999999999998 9999999999999997 899999999999765
Q ss_pred CCC---CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 691 GGD---AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 691 ~~~---~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
... .....+|..|+|||.......+ ++.++|||||||++|||+||+.||..
T Consensus 174 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~-------~~~~~Di~slG~il~~l~~g~~pf~~ 227 (295)
T 2clq_A 174 AGINPCTETFTGTLQYMAPEIIDKGPRG-------YGKAADIWSLGCTIIEMATGKPPFYE 227 (295)
T ss_dssp CC-----CCCCCCGGGCCHHHHHHGGGG-------CSHHHHHHHHHHHHHHHHHTSCTTGG
T ss_pred CCCCCcccccCCCccccChhhhcCCCCC-------CCcHHHHHHHHHHHHHHHHCCCCccC
Confidence 321 2345688999999987543221 47899999999999999999999953
No 203
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=1e-34 Score=312.62 Aligned_cols=197 Identities=18% Similarity=0.233 Sum_probs=168.2
Q ss_pred CCCCccceeecCCcceEEEEEE-----cCCcEEEEEEeeccccC-HHHHHHHHHHHhhcCCCCcccceeEEEe-cCCcEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-----EGGIPVVIKRIDLQSVK-TEAYLLELDFFSKVSHARLVPLLGHCME-RENEKF 606 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-----~~g~~vavK~l~~~~~~-~~~~~~E~~~l~~l~H~niv~l~~~~~~-~~~~~~ 606 (766)
++|+..+.||+|+||.||+|+. .+++.||||++...... .+.+.+|++++++++||||+++++++.. ..+..+
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 102 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR 102 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEE
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEE
Confidence 4688899999999999999983 46889999999765433 5679999999999999999999998764 245689
Q ss_pred EEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchh
Q 004248 607 LVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSE 686 (766)
Q Consensus 607 lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~ 686 (766)
+||||+++|+|.+++..... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 103 lv~e~~~~~~L~~~l~~~~~------~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~ 173 (327)
T 3lxl_A 103 LVMEYLPSGCLRDFLQRHRA------RLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGL 173 (327)
T ss_dssp EEEECCTTCBHHHHHHHHGG------GCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCGGG
T ss_pred EEEeecCCCCHHHHHHhccc------CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEccccc
Confidence 99999999999999976432 489999999999999999999998 999999999999999999999999999
Q ss_pred hhhcCCC------CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 687 VCAQGGD------AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 687 a~~~~~~------~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
++..... .....+|..|+|||...... ++.++|||||||++|||+||+.||..
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~Di~slG~il~~ll~g~~p~~~ 232 (327)
T 3lxl_A 174 AKLLPLDKDYYVVREPGQSPIFWYAPESLSDNI---------FSRQSDVWSFGVVLYELFTYCDKSCS 232 (327)
T ss_dssp CEECCTTCSEEECSSCCCSCGGGSCHHHHHHCE---------EEHHHHHHHHHHHHHHHHTTTCGGGS
T ss_pred ceecccCCccceeeccCCccccccCHHHhccCC---------CChHHhHHHHHHHHHHHHhCCCCCcc
Confidence 9865322 22345677899999875433 47899999999999999999999853
No 204
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=8.5e-35 Score=309.14 Aligned_cols=203 Identities=16% Similarity=0.229 Sum_probs=165.1
Q ss_pred hCCCCccceeecCCcceEEEEEEc-CCcEEEEEEeecccc-CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEe
Q 004248 533 TGDFSDANLIKNGHSGDLFRGILE-GGIPVVIKRIDLQSV-KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYK 610 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~E 610 (766)
.++|+..+.||+|+||.||+|... +++.||+|.+..... ..+++.+|++++++++||||+++++++.. ++..++|||
T Consensus 18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e 96 (302)
T 2j7t_A 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYH-DGKLWIMIE 96 (302)
T ss_dssp GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-C-CEEEEEE
T ss_pred ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeee-CCeEEEEEE
Confidence 356888999999999999999964 689999999865443 36789999999999999999999998876 568999999
Q ss_pred eCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhc
Q 004248 611 YMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQ 690 (766)
Q Consensus 611 y~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~ 690 (766)
|+++|+|.+++.... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 97 ~~~~~~l~~~~~~~~------~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 167 (302)
T 2j7t_A 97 FCPGGAVDAIMLELD------RGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKN 167 (302)
T ss_dssp CCTTEEHHHHHHHHT------SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHHHHH
T ss_pred eCCCCcHHHHHHhhc------cCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCCccc
Confidence 999999999987543 2489999999999999999999998 9999999999999999999999999997643
Q ss_pred C---CCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 691 G---GDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 691 ~---~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
. .......+|..|+|||.......+... ++.++|||||||++|||+||+.||...
T Consensus 168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~----~~~~~Di~slG~il~~l~~g~~p~~~~ 225 (302)
T 2j7t_A 168 LKTLQKRDSFIGTPYWMAPEVVMCETMKDTP----YDYKADIWSLGITLIEMAQIEPPHHEL 225 (302)
T ss_dssp HHHHHC-----CCGGGCCHHHHHHHHTTSTT----TTTHHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred cccccccccccCChhhcCCeeeccccCCCCC----CchhhhHHHHHHHHHHHhcCCCCCccC
Confidence 1 122344688999999976321100001 578999999999999999999999643
No 205
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=2.6e-34 Score=308.22 Aligned_cols=193 Identities=21% Similarity=0.347 Sum_probs=164.3
Q ss_pred CCccceeecCCcceEEEEEE-----cCCcEEEEEEeeccccC--HHHHHHHHHHHhhcCCCCcccceeEEEec-CCcEEE
Q 004248 536 FSDANLIKNGHSGDLFRGIL-----EGGIPVVIKRIDLQSVK--TEAYLLELDFFSKVSHARLVPLLGHCMER-ENEKFL 607 (766)
Q Consensus 536 ~~~~~~ig~G~~g~Vy~~~~-----~~g~~vavK~l~~~~~~--~~~~~~E~~~l~~l~H~niv~l~~~~~~~-~~~~~l 607 (766)
|+..+.||+|+||.||+|.. .+++.||||++...... .+.+.+|++++++++||||+++++++.+. ....++
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 112 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL 112 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence 47889999999999998863 36889999999765322 56799999999999999999999988764 356899
Q ss_pred EEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhh
Q 004248 608 VYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEV 687 (766)
Q Consensus 608 V~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a 687 (766)
||||+++|+|.+++.+. .+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 113 v~e~~~~~~L~~~l~~~--------~~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a 181 (318)
T 3lxp_A 113 VMEYVPLGSLRDYLPRH--------SIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLA 181 (318)
T ss_dssp EECCCTTCBHHHHGGGS--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGC
T ss_pred EEecccCCcHHHHHhhC--------CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCcccc
Confidence 99999999999999653 289999999999999999999998 9999999999999999999999999999
Q ss_pred hhcCCC------CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 688 CAQGGD------AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 688 ~~~~~~------~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
+..... .....+|..|+|||...... ++.++|||||||++|||+||+.||..
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~Di~slG~il~~ll~g~~p~~~ 239 (318)
T 3lxp_A 182 KAVPEGHEYYRVREDGDSPVFWYAPECLKEYK---------FYYASDVWSFGVTLYELLTHCDSSQS 239 (318)
T ss_dssp EECCTTCSEEEC---CCCCGGGCCHHHHHHCE---------EEHHHHHHHHHHHHHHHHTTTCGGGS
T ss_pred ccccccccccccccCCCCCceeeChHHhcCCC---------CCcHHHHHHHHHHHHHHHhCCCcccc
Confidence 876432 22335677899999875433 46899999999999999999999854
No 206
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=1.2e-34 Score=304.81 Aligned_cols=194 Identities=22% Similarity=0.335 Sum_probs=166.7
Q ss_pred CCCCccceeecCCcceEEEEEEc-CCcEEEEEEeeccccCHHHHHHHHHHHhhcCCCCcccceeEEEe------------
Q 004248 534 GDFSDANLIKNGHSGDLFRGILE-GGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCME------------ 600 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~------------ 600 (766)
++|+..+.||+|+||.||+|+.. +|+.||||++.... +.+.+|++++++++||||+++++++..
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~ 87 (284)
T 2a19_B 11 MDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN---EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNS 87 (284)
T ss_dssp HHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS---GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC--------
T ss_pred cccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc---HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccccc
Confidence 46888999999999999999964 79999999997543 457789999999999999999997643
Q ss_pred ---cCCcEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCC
Q 004248 601 ---RENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKF 677 (766)
Q Consensus 601 ---~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~ 677 (766)
.....++||||+++|+|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+||++++++
T Consensus 88 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~ 159 (284)
T 2a19_B 88 SRSKTKCLFIQMEFCDKGTLEQWIEKRRG-----EKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTK 159 (284)
T ss_dssp -CCEEEEEEEEECCCCSCBHHHHHHHGGG-----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETT
T ss_pred cccCcceEEEEEeccCCCCHHHHHhhccC-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEcCCC
Confidence 12347999999999999999975432 3489999999999999999999998 999999999999999999
Q ss_pred cEEeccchhhhhcCC--CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCC
Q 004248 678 EVRLGSLSEVCAQGG--DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNL 747 (766)
Q Consensus 678 ~~kl~DFG~a~~~~~--~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~ 747 (766)
.+||+|||+++.... ......+|..|+|||...... ++.++|||||||++|||+||+.|+.
T Consensus 160 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~Di~slG~il~~l~~~~~~~~ 222 (284)
T 2a19_B 160 QVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQD---------YGKEVDLYALGLILAELLHVCDTAF 222 (284)
T ss_dssp EEEECCCTTCEESSCCSCCCCCCSCCTTSCHHHHHCSC---------CCTHHHHHHHHHHHHHHHSCCSSHH
T ss_pred CEEECcchhheeccccccccccCCcccccChhhhccCC---------CcchhhhHHHHHHHHHHHhcCCcch
Confidence 999999999987643 234456899999999875443 4789999999999999999998874
No 207
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=2.1e-34 Score=308.21 Aligned_cols=250 Identities=30% Similarity=0.466 Sum_probs=229.5
Q ss_pred CCCCEEEccCCCCCc--cCCcccCCCCCCcEEEeec-CcCCCCCCccccCCCCCCEEEccCCCCCCCCCcccCCCCCCCE
Q 004248 142 PTLQALDLRSCSISG--VIPFSLGNLTNLTSLYLSD-NGLTGTIPSSLGQLSVLSVLDLSRNSLTGNIPTSFGLLKNLSS 218 (766)
Q Consensus 142 ~~L~~L~Ls~N~l~g--~~p~~l~~l~~L~~L~Ls~-N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 218 (766)
.+++.|+|++|.+++ .+|..++++++|++|+|++ |.+++.+|..|+++++|++|+|++|++++.+|..|.++++|++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 129 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCE
Confidence 578999999999999 8999999999999999995 9999999999999999999999999999999999999999999
Q ss_pred EeccCCcCCCCCCCCCCCCCCccEEEccCCCCCCCCccccCCCC-CCCEEEccCCcCCccCCcccCCCCCCCEEEccCcc
Q 004248 219 LDISSNYLTGSIPPGLGTLSKLQYLNVSNNSLASSIPAQLGDLD-SLVDLDLSMNSLSGSVPSELRGLRSLQKFVIGNNF 297 (766)
Q Consensus 219 L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~-~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~ 297 (766)
|+|++|.+++.+|..+.++++|++|+|++|++++.+|..+++++ +|++|++++|++++.+|..+..++ |+.|++++|.
T Consensus 130 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~ 208 (313)
T 1ogq_A 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNM 208 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSE
T ss_pred EeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCc
Confidence 99999999999999999999999999999999999999999998 999999999999999999999997 9999999999
Q ss_pred CccccCCCccCCCCcccEEEccCCCCCCCCCcccCCCCCCCEEEccCCCCCCCCCcccccCCCCCcEEEccCCcCccCCC
Q 004248 298 LSGNLSVNLFPTVSQLQIIVLRQNGFTGPPPDVLWSMPQLRLLDISRNNFTGPLPNSRSNVNTSTVELNISQNMFYGGLT 377 (766)
Q Consensus 298 l~g~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~L~ls~N~l~g~~~ 377 (766)
+++.+|. .|..+++|+.|+|++|++++.+|. +..+++|++|+|++|+++|.+|... ..+++|+.|++++|.++|.+|
T Consensus 209 l~~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l-~~l~~L~~L~Ls~N~l~~~ip 285 (313)
T 1ogq_A 209 LEGDASV-LFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGL-TQLKFLHSLNVSFNNLCGEIP 285 (313)
T ss_dssp EEECCGG-GCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGG-GGCTTCCEEECCSSEEEEECC
T ss_pred ccCcCCH-HHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHH-hcCcCCCEEECcCCcccccCC
Confidence 9986664 458899999999999999988776 7889999999999999999999654 556789999999999998888
Q ss_pred cC--CCCCCEEeccCCc-Ccc
Q 004248 378 PV--LGRFRLVDLSGNY-FEG 395 (766)
Q Consensus 378 ~~--l~~l~~ldLs~N~-l~g 395 (766)
.. +++|+.+++++|+ +.|
T Consensus 286 ~~~~l~~L~~l~l~~N~~lc~ 306 (313)
T 1ogq_A 286 QGGNLQRFDVSAYANNKCLCG 306 (313)
T ss_dssp CSTTGGGSCGGGTCSSSEEES
T ss_pred CCccccccChHHhcCCCCccC
Confidence 63 5678888888887 555
No 208
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=4e-35 Score=319.21 Aligned_cols=195 Identities=15% Similarity=0.146 Sum_probs=164.6
Q ss_pred CCCCccceeecCCcceEEEEEEc---------CCcEEEEEEeeccccCHHHHHHHHHHHhhcCCCCccc-----------
Q 004248 534 GDFSDANLIKNGHSGDLFRGILE---------GGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVP----------- 593 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~~---------~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~H~niv~----------- 593 (766)
++|...+.||+|+||.||+|+.. +++.||||.+... +.+.+|++++++++|||||+
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 117 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLL 117 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT----STHHHHHHHHHHHCCHHHHHHHHHHTTCTTC
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc----chHHHHHHHHHHhcccchhhhhhhhccCCcc
Confidence 56888999999999999999964 3889999998744 46889999999999999988
Q ss_pred ----ceeEEEecCCcEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCC
Q 004248 594 ----LLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQAS 669 (766)
Q Consensus 594 ----l~~~~~~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~ 669 (766)
+++++...++..|+||||+ +|+|.+++..... ..+++.++..++.|++.||+|||+. +|+||||||+
T Consensus 118 ~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~-----~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~ 188 (352)
T 2jii_A 118 AIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPK-----HVLSERSVLQVACRLLDALEFLHEN---EYVHGNVTAE 188 (352)
T ss_dssp SCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGG-----GCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCGG
T ss_pred CccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHH
Confidence 5676665457899999999 9999999986421 3499999999999999999999998 9999999999
Q ss_pred CeeeCCCC--cEEeccchhhhhcCCC----------CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHH
Q 004248 670 SILLDDKF--EVRLGSLSEVCAQGGD----------AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLF 737 (766)
Q Consensus 670 NILl~~~~--~~kl~DFG~a~~~~~~----------~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ 737 (766)
|||++.++ .+||+|||+++..... .....+|..|+|||...... ++.++|||||||++|
T Consensus 189 NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---------~~~~~Di~slG~il~ 259 (352)
T 2jii_A 189 NIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCG---------PSRRSDLQSLGYCML 259 (352)
T ss_dssp GEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCC---------CCHHHHHHHHHHHHH
T ss_pred HEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCC---------CCchhhHHHHHHHHH
Confidence 99999998 8999999999765311 13347899999999876543 478999999999999
Q ss_pred HHhcCCCCCCCCc
Q 004248 738 SAIFNNHLNLSSR 750 (766)
Q Consensus 738 elltG~~p~~~~~ 750 (766)
||+||+.||....
T Consensus 260 el~~g~~pf~~~~ 272 (352)
T 2jii_A 260 KWLYGFLPWTNCL 272 (352)
T ss_dssp HHHHSCCTTGGGT
T ss_pred HHHhCCCCcccCC
Confidence 9999999996543
No 209
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=7.5e-35 Score=316.16 Aligned_cols=195 Identities=14% Similarity=0.116 Sum_probs=159.6
Q ss_pred CCCCccceeecCCcceEEEEEEc----CCcEEEEEEeecccc------------CHHHHHHHHHHHhhcCCCCcccceeE
Q 004248 534 GDFSDANLIKNGHSGDLFRGILE----GGIPVVIKRIDLQSV------------KTEAYLLELDFFSKVSHARLVPLLGH 597 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~~----~g~~vavK~l~~~~~------------~~~~~~~E~~~l~~l~H~niv~l~~~ 597 (766)
++|...+.||+|+||.||+|... ++..||||++..... ..+.+.+|+.+++.++||||++++++
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~ 116 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS 116 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence 56888999999999999999964 678999999875432 12357789999999999999999998
Q ss_pred EEec---CCcEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeC
Q 004248 598 CMER---ENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLD 674 (766)
Q Consensus 598 ~~~~---~~~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~ 674 (766)
+... ....|+||||+ +|+|.+++...+ .+++.++..++.||+.||+|||+. +|+||||||+|||++
T Consensus 117 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~-------~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~ 185 (345)
T 2v62_A 117 GLTEFKGRSYRFMVMERL-GIDLQKISGQNG-------TFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLG 185 (345)
T ss_dssp EEEESSSCEEEEEEEECE-EEEHHHHCBGGG-------BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEE
T ss_pred cccccCCCcEEEEEEecc-CCCHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEc
Confidence 7652 35789999999 999999997543 489999999999999999999998 999999999999999
Q ss_pred CCC--cEEeccchhhhhcCCC----------CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcC
Q 004248 675 DKF--EVRLGSLSEVCAQGGD----------AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFN 742 (766)
Q Consensus 675 ~~~--~~kl~DFG~a~~~~~~----------~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG 742 (766)
.++ .+||+|||+++..... .....+|..|+|||...... ++.++|||||||++|||+||
T Consensus 186 ~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---------~~~~~Di~slG~il~ell~g 256 (345)
T 2v62_A 186 YKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVA---------LSRRSDVEILGYCMLRWLCG 256 (345)
T ss_dssp SSSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCC---------CCHHHHHHHHHHHHHHHHHS
T ss_pred cCCCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCC---------CCchhhHHHHHHHHHHHHhC
Confidence 887 9999999999765211 13446899999999876543 57899999999999999999
Q ss_pred CCCCCC
Q 004248 743 NHLNLS 748 (766)
Q Consensus 743 ~~p~~~ 748 (766)
+.||..
T Consensus 257 ~~pf~~ 262 (345)
T 2v62_A 257 KLPWEQ 262 (345)
T ss_dssp SCTTGG
T ss_pred CCCccc
Confidence 999953
No 210
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=1.7e-34 Score=303.84 Aligned_cols=196 Identities=20% Similarity=0.329 Sum_probs=164.1
Q ss_pred hCCCCccceeecCCcceEEEEEEcC----CcEEEEEEeecccc--CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEE
Q 004248 533 TGDFSDANLIKNGHSGDLFRGILEG----GIPVVIKRIDLQSV--KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKF 606 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~~~~----g~~vavK~l~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~ 606 (766)
.++|...+.||+|+||.||+|+... +..||||.+..... ..++|.+|++++++++||||+++++++.+ +..+
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--~~~~ 88 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE--EPTW 88 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS--SSCE
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC--CCCE
Confidence 3568889999999999999998532 34699999876432 25679999999999999999999997643 4679
Q ss_pred EEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchh
Q 004248 607 LVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSE 686 (766)
Q Consensus 607 lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~ 686 (766)
+||||+++|+|.+++.+... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 89 ~v~e~~~~~~L~~~l~~~~~------~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~ 159 (281)
T 3cc6_A 89 IIMELYPYGELGHYLERNKN------SLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGDFGL 159 (281)
T ss_dssp EEEECCTTCBHHHHHHHHTT------TCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECCCCG
T ss_pred EEEecCCCCCHHHHHHhccc------cCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCccCC
Confidence 99999999999999976432 489999999999999999999998 999999999999999999999999999
Q ss_pred hhhcCCC----CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCC
Q 004248 687 VCAQGGD----AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLS 748 (766)
Q Consensus 687 a~~~~~~----~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~ 748 (766)
++..... .....++..|+|||...... ++.++|||||||++|||+| |+.||..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~Di~slG~il~~llt~g~~p~~~ 217 (281)
T 3cc6_A 160 SRYIEDEDYYKASVTRLPIKWMSPESINFRR---------FTTASDVWMFAVCMWEILSFGKQPFFW 217 (281)
T ss_dssp GGCC---------CCCCCGGGCCHHHHHHCC---------CCHHHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred CcccccccccccccCCCCcceeCchhhccCC---------CCchhccHHHHHHHHHHHhCCCCCccc
Confidence 9865332 22334577899999875433 4789999999999999998 9999954
No 211
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=2.7e-34 Score=309.80 Aligned_cols=201 Identities=19% Similarity=0.217 Sum_probs=152.9
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC-HHHHHHHHHHHhhcC-CCCcccceeEEEe-------cCC
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK-TEAYLLELDFFSKVS-HARLVPLLGHCME-------REN 603 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~-~~~~~~E~~~l~~l~-H~niv~l~~~~~~-------~~~ 603 (766)
.+|+..++||+|+||.||+|+. .+++.||||++...... .+.+.+|+++++++. ||||+++++++.. ...
T Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~ 107 (337)
T 3ll6_A 28 LRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQA 107 (337)
T ss_dssp EEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSE
T ss_pred ceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCc
Confidence 4688899999999999999995 57899999998654433 567899999999996 9999999998742 223
Q ss_pred cEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCC--eEecCCCCCCeeeCCCCcEEe
Q 004248 604 EKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLP--FVHRDVQASSILLDDKFEVRL 681 (766)
Q Consensus 604 ~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~--iiHrDlKp~NILl~~~~~~kl 681 (766)
..++||||++ |+|.+++..... ...+++.++..++.|++.||+|||+. + |+||||||+|||++.++.+||
T Consensus 108 ~~~lv~e~~~-g~L~~~l~~~~~----~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~~~~~~~kl 179 (337)
T 3ll6_A 108 EFLLLTELCK-GQLVEFLKKMES----RGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLSNQGTIKL 179 (337)
T ss_dssp EEEEEEECCS-EEHHHHHHHHHT----TCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEECTTSCEEB
T ss_pred eEEEEEEecC-CCHHHHHHHhhc----cCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEECCCCCEEE
Confidence 5899999997 799999875221 12499999999999999999999987 6 999999999999999999999
Q ss_pred ccchhhhhcCCCC---------------ccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCC
Q 004248 682 GSLSEVCAQGGDA---------------HQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLN 746 (766)
Q Consensus 682 ~DFG~a~~~~~~~---------------~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~ 746 (766)
+|||+++...... ....+|..|+|||......... ++.++|||||||++|||+||+.||
T Consensus 180 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~------~~~~~Dv~slG~il~el~~g~~p~ 253 (337)
T 3ll6_A 180 CDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFP------IGEKQDIWALGCILYLLCFRQHPF 253 (337)
T ss_dssp CCCTTCBCCSSCC-------------------------------CCTTSC------SSHHHHHHHHHHHHHHHHHSSCCC
T ss_pred ecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCC------CChHHhHHHHHHHHHHHHhCCCCC
Confidence 9999998653221 1345889999999874222111 578999999999999999999999
Q ss_pred CC
Q 004248 747 LS 748 (766)
Q Consensus 747 ~~ 748 (766)
..
T Consensus 254 ~~ 255 (337)
T 3ll6_A 254 ED 255 (337)
T ss_dssp --
T ss_pred cc
Confidence 53
No 212
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=6.6e-35 Score=313.33 Aligned_cols=199 Identities=16% Similarity=0.194 Sum_probs=164.1
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeecccc---------CHHHHHHHHHHHhhcCCCCcccceeEEEecCC
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV---------KTEAYLLELDFFSKVSHARLVPLLGHCMEREN 603 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~---------~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~ 603 (766)
++|...+.||+|+||.||+|+. .+++.||||.+..... ....+.+|++++++++||||+++++++.. +
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--~ 87 (322)
T 2ycf_A 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA--E 87 (322)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEES--S
T ss_pred hceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcC--C
Confidence 5688999999999999999995 5689999999865321 12358899999999999999999997754 3
Q ss_pred cEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCc---EE
Q 004248 604 EKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFE---VR 680 (766)
Q Consensus 604 ~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~---~k 680 (766)
..|+||||+++|+|.+++.... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++. +|
T Consensus 88 ~~~lv~e~~~~~~L~~~~~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~k 157 (322)
T 2ycf_A 88 DYYIVLELMEGGELFDKVVGNK-------RLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIK 157 (322)
T ss_dssp SEEEEEECCTTEETHHHHSTTC-------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSSSCCEE
T ss_pred ceEEEEecCCCCcHHHHHhccC-------CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCCCCeEE
Confidence 5899999999999999986543 389999999999999999999998 9999999999999987664 99
Q ss_pred eccchhhhhcCCCC--ccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCCc
Q 004248 681 LGSLSEVCAQGGDA--HQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSSR 750 (766)
Q Consensus 681 l~DFG~a~~~~~~~--~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~~ 750 (766)
|+|||+++...... ....+|..|+|||.+.....+. ++.++|||||||++|||+||+.||....
T Consensus 158 l~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~------~~~~~Di~slG~il~~l~~g~~pf~~~~ 223 (322)
T 2ycf_A 158 ITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAG------YNRAVDCWSLGVILFICLSGYPPFSEHR 223 (322)
T ss_dssp ECCCTTCEECCCCHHHHHHHSCCTTCCHHHHHHTTTTT------CTTHHHHHHHHHHHHHHHHSSCSSCSTT
T ss_pred EccCccceecccccccccccCCcCccCchhhccCCCCC------CCchhhHHHHHHHHHHHHhCCCCCcccc
Confidence 99999998764332 2346899999999763211111 5789999999999999999999996443
No 213
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.9e-34 Score=336.02 Aligned_cols=189 Identities=19% Similarity=0.294 Sum_probs=159.3
Q ss_pred eeecCCcceEEEEEEc---CCcEEEEEEeecccc--CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEeeCCCC
Q 004248 541 LIKNGHSGDLFRGILE---GGIPVVIKRIDLQSV--KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNG 615 (766)
Q Consensus 541 ~ig~G~~g~Vy~~~~~---~g~~vavK~l~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey~~~G 615 (766)
.||+|+||.||+|... ++..||||+++.... ..++|.+|+++|++++|||||+++++|.. +..++|||||++|
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~--~~~~lv~E~~~~g 420 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA--EALMLVMEMAGGG 420 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES--SSEEEEEECCTTC
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc--CCeEEEEEeCCCC
Confidence 7999999999999853 567899999976432 36789999999999999999999998764 4699999999999
Q ss_pred ChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcCCCC-
Q 004248 616 DLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDA- 694 (766)
Q Consensus 616 sL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~~~~- 694 (766)
+|.+++.... ..+++.++..++.||+.||+|||++ +||||||||+|||+++++.+||+|||+++......
T Consensus 421 ~L~~~l~~~~------~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~ 491 (613)
T 2ozo_A 421 PLHKFLVGKR------EEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDS 491 (613)
T ss_dssp BHHHHHTTCT------TTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC----
T ss_pred cHHHHHhhcc------CCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCc
Confidence 9999997543 2489999999999999999999998 99999999999999999999999999998763221
Q ss_pred -----ccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCCC
Q 004248 695 -----HQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLSS 749 (766)
Q Consensus 695 -----~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~~ 749 (766)
....++..|+|||.+.... ++.++|||||||++|||+| |+.||...
T Consensus 492 ~~~~~~~~~~~~~y~APE~~~~~~---------~~~~sDvwSlGv~l~ellt~G~~Pf~~~ 543 (613)
T 2ozo_A 492 YYTARSAGKWPLKWYAPECINFRK---------FSSRSDVWSYGVTMWEALSYGQKPYKKM 543 (613)
T ss_dssp ----------CCTTSCHHHHHHCC---------CCHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred eeeeccCCCCccceeCHhhhcCCC---------CCcHHHHHHHHHHHHHHHHCCCCCCCCC
Confidence 1223456899999875433 5789999999999999998 99999543
No 214
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=2.9e-34 Score=316.06 Aligned_cols=201 Identities=19% Similarity=0.202 Sum_probs=170.6
Q ss_pred HhCCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccCHHHHHHHHHHHhhcC-CCC-----cccceeEEEecCCc
Q 004248 532 ATGDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVKTEAYLLELDFFSKVS-HAR-----LVPLLGHCMERENE 604 (766)
Q Consensus 532 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~-H~n-----iv~l~~~~~~~~~~ 604 (766)
..++|+..+.||+|+||.||+|+. .+++.||||+++......+++.+|+++++.++ |++ |+++++++.. ++.
T Consensus 52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~-~~~ 130 (382)
T 2vx3_A 52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMF-RNH 130 (382)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEE-TTE
T ss_pred eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccHHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeecc-CCc
Confidence 357899999999999999999985 57889999999755444567888999999885 553 9999997766 568
Q ss_pred EEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeC--CCCcEEec
Q 004248 605 KFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLD--DKFEVRLG 682 (766)
Q Consensus 605 ~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~--~~~~~kl~ 682 (766)
.++||||++ |+|.+++..... ..+++..+..++.|++.||+|||++ ..+||||||||+|||++ .++.+||+
T Consensus 131 ~~lv~e~~~-~~L~~~l~~~~~-----~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~ 203 (382)
T 2vx3_A 131 LCLVFEMLS-YNLYDLLRNTNF-----RGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIV 203 (382)
T ss_dssp EEEEEECCC-CBHHHHHHHTTT-----SCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEEC
T ss_pred eEEEEecCC-CCHHHHHhhcCc-----CCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEE
Confidence 999999997 599999976532 3489999999999999999999952 24899999999999995 57889999
Q ss_pred cchhhhhcCCCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 683 SLSEVCAQGGDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 683 DFG~a~~~~~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
|||+++..+.......+|+.|+|||.+.... ++.++|||||||++|||+||+.||...
T Consensus 204 DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~---------~~~~~DiwSlG~il~elltg~~pf~~~ 261 (382)
T 2vx3_A 204 DFGSSCQLGQRIYQYIQSRFYRSPEVLLGMP---------YDLAIDMWSLGCILVEMHTGEPLFSGA 261 (382)
T ss_dssp CCTTCEETTCCCCSSCSCGGGCCHHHHTTCC---------CCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred eccCceecccccccccCCccccChHHHcCCC---------CCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 9999988776666778999999999886544 478999999999999999999999643
No 215
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=8.9e-35 Score=308.86 Aligned_cols=205 Identities=22% Similarity=0.231 Sum_probs=153.0
Q ss_pred hCCCCccceeecCCcceEEEEE-EcCCcEEEEEEeecccc--CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEE
Q 004248 533 TGDFSDANLIKNGHSGDLFRGI-LEGGIPVVIKRIDLQSV--KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVY 609 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~-~~~g~~vavK~l~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~ 609 (766)
.++|+..+.||+|+||.||+|. ..+++.||||++..... ..+++.+|++++++++||||+++++++.. ++..++||
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~ 92 (303)
T 2vwi_A 14 RDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVV-KDELWLVM 92 (303)
T ss_dssp CCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEES-SSCEEEEE
T ss_pred hhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEee-cCCcEEEe
Confidence 4679999999999999999998 45789999999865432 25678999999999999999999998765 56799999
Q ss_pred eeCCCCChhhhhhccCC-CCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhh
Q 004248 610 KYMPNGDLSSSLYRKTN-TEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVC 688 (766)
Q Consensus 610 Ey~~~GsL~~~l~~~~~-~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~ 688 (766)
||+++|+|.+++..... .......+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 93 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~ 169 (303)
T 2vwi_A 93 KLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVSA 169 (303)
T ss_dssp ECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCHHHH
T ss_pred hhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEEeccchh
Confidence 99999999999864210 001123589999999999999999999998 99999999999999999999999999997
Q ss_pred hcCCC--------CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 689 AQGGD--------AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 689 ~~~~~--------~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
..... .....+|+.|+|||....... ++.++|||||||++|||+||+.||...
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~--------~~~~~Di~slG~il~~l~~g~~pf~~~ 230 (303)
T 2vwi_A 170 FLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRG--------YDFKADIWSFGITAIELATGAAPYHKY 230 (303)
T ss_dssp HCC---------------CCCTTCCHHHHHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred eeccCCCccchhhhcccCCCccccCHHHhccccC--------CCchhhHHHHHHHHHHHHhCCCCCccC
Confidence 65321 123467899999997643211 478999999999999999999999643
No 216
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=2.1e-34 Score=310.13 Aligned_cols=203 Identities=21% Similarity=0.350 Sum_probs=164.4
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcE--EEEEEeecccc--CHHHHHHHHHHHhhc-CCCCcccceeEEEecCCcEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIP--VVIKRIDLQSV--KTEAYLLELDFFSKV-SHARLVPLLGHCMERENEKFL 607 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~--vavK~l~~~~~--~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~~l 607 (766)
++|+..+.||+|+||.||+|+. .++.. ||||++..... ..+++.+|+++++++ +||||+++++++.+ ++..|+
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~-~~~~~l 103 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEH-RGYLYL 103 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEE-TTEEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeee-CCceEE
Confidence 5688899999999999999984 56664 49999875332 245799999999999 89999999998866 568999
Q ss_pred EEeeCCCCChhhhhhccCCC---------CCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCc
Q 004248 608 VYKYMPNGDLSSSLYRKTNT---------EDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFE 678 (766)
Q Consensus 608 V~Ey~~~GsL~~~l~~~~~~---------~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~ 678 (766)
||||+++|+|.+++...... ......+++.++..++.|++.||+|||+. +|+||||||+||+++.++.
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~ 180 (327)
T 1fvr_A 104 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYV 180 (327)
T ss_dssp EECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGC
T ss_pred EEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEEcCCCe
Confidence 99999999999999764300 00123589999999999999999999998 9999999999999999999
Q ss_pred EEeccchhhhhcC--CCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCCC
Q 004248 679 VRLGSLSEVCAQG--GDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLSS 749 (766)
Q Consensus 679 ~kl~DFG~a~~~~--~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~~ 749 (766)
+||+|||+++... .......++..|+|||...... ++.++|||||||++|||+| |+.||...
T Consensus 181 ~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~Di~slG~il~ellt~g~~pf~~~ 245 (327)
T 1fvr_A 181 AKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSV---------YTTNSDVWSYGVLLWEIVSLGGTPYCGM 245 (327)
T ss_dssp EEECCTTCEESSCEECCC----CCTTTCCHHHHHHCE---------ECHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred EEEcccCcCccccccccccCCCCCccccChhhhcccc---------CCchhcchHHHHHHHHHHcCCCCCCCCC
Confidence 9999999987542 1223345577899999874332 4789999999999999998 99999543
No 217
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=4.4e-34 Score=303.07 Aligned_cols=201 Identities=23% Similarity=0.254 Sum_probs=169.4
Q ss_pred hCCCCccceeecCCcceEEEEEE-cCCcEEEEEEeecccc----------CHHHHHHHHHHHhhcC-CCCcccceeEEEe
Q 004248 533 TGDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV----------KTEAYLLELDFFSKVS-HARLVPLLGHCME 600 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~----------~~~~~~~E~~~l~~l~-H~niv~l~~~~~~ 600 (766)
.++|+..+.||+|+||.||+|.. .+|+.||||.++.... ..+.+.+|++++++++ ||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 95 (298)
T 1phk_A 16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET 95 (298)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred hhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeecc
Confidence 46788999999999999999995 5789999999975431 1456889999999996 9999999997765
Q ss_pred cCCcEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEE
Q 004248 601 RENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVR 680 (766)
Q Consensus 601 ~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~k 680 (766)
++..++||||+++|+|.+++..+. .+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+|
T Consensus 96 -~~~~~lv~e~~~~~~L~~~l~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~k 164 (298)
T 1phk_A 96 -NTFFFLVFDLMKKGELFDYLTEKV-------TLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIK 164 (298)
T ss_dssp -SSEEEEEEECCTTCBHHHHHHHHS-------SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEE
T ss_pred -CCeEEEEEeccCCCcHHHHHhccC-------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCCCcEE
Confidence 568999999999999999997643 389999999999999999999998 999999999999999999999
Q ss_pred eccchhhhhcCC--CCccceeeecccCCCCCCCCce-eeeeeeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 681 LGSLSEVCAQGG--DAHQSRITRLLRLPQSSEQGSS-GMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 681 l~DFG~a~~~~~--~~~~~~~t~~y~aPe~~~~~~~-g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
|+|||+++.... ......++..|+|||....... +.. .++.++|||||||++|||++|+.||..
T Consensus 165 l~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~----~~~~~~Di~slG~~l~~l~~g~~p~~~ 231 (298)
T 1phk_A 165 LTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHP----GYGKEVDMWSTGVIMYTLLAGSPPFWH 231 (298)
T ss_dssp ECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSC----CBCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred EecccchhhcCCCcccccccCCccccCHHHhccccccccc----cCCcccccHhHHHHHHHHHHCCCCCcC
Confidence 999999976532 2344568899999997642100 000 157899999999999999999999954
No 218
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=2.5e-34 Score=309.50 Aligned_cols=203 Identities=20% Similarity=0.272 Sum_probs=165.3
Q ss_pred CCCCccceeecCCcceEEEEEE------cCCcEEEEEEeecccc--CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcE
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL------EGGIPVVIKRIDLQSV--KTEAYLLELDFFSKVSHARLVPLLGHCMERENEK 605 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~------~~g~~vavK~l~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 605 (766)
++|...+.||+|+||.||+|+. .+++.||||++..... ..+++.+|+.++++++||||+++++++.. .+..
T Consensus 30 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~ 108 (327)
T 2yfx_A 30 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQ-SLPR 108 (327)
T ss_dssp GGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSSC
T ss_pred hheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcC-CCCc
Confidence 5688999999999999999983 3577999999964332 25679999999999999999999998765 5678
Q ss_pred EEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCC---CCcEEec
Q 004248 606 FLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDD---KFEVRLG 682 (766)
Q Consensus 606 ~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~---~~~~kl~ 682 (766)
|+||||+++|+|.+++............+++.++..++.|++.||+|||+. +|+||||||+||+++. +..+||+
T Consensus 109 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~~~~~kl~ 185 (327)
T 2yfx_A 109 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIG 185 (327)
T ss_dssp EEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCCcceEEEC
Confidence 999999999999999987543222334589999999999999999999998 9999999999999994 4469999
Q ss_pred cchhhhhcCC-----CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCCC
Q 004248 683 SLSEVCAQGG-----DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLSS 749 (766)
Q Consensus 683 DFG~a~~~~~-----~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~~ 749 (766)
|||+++.... ......+|..|+|||...... ++.++|||||||++|||+| |+.||...
T Consensus 186 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~Di~slG~il~ellt~g~~p~~~~ 249 (327)
T 2yfx_A 186 DFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGI---------FTSKTDTWSFGVLLWEIFSLGYMPYPSK 249 (327)
T ss_dssp CCHHHHHHHC------CCGGGSCGGGCCHHHHHHCC---------CCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred ccccccccccccccccCCCcCCCcceeCHhHhcCCC---------CCchhhHHHHHHHHHHHHcCCCCCCCCc
Confidence 9999975421 122345688899999875433 4789999999999999998 99998543
No 219
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.8e-34 Score=308.98 Aligned_cols=197 Identities=20% Similarity=0.303 Sum_probs=159.2
Q ss_pred HhCCCCccceeecCCcceEEEEEEcCCcEEEEEEeeccccCHHHHHHHHHHHhhc--CCCCcccceeEEEecC---CcEE
Q 004248 532 ATGDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKV--SHARLVPLLGHCMERE---NEKF 606 (766)
Q Consensus 532 ~~~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l--~H~niv~l~~~~~~~~---~~~~ 606 (766)
..++|+..+.||+|+||.||+|+.. ++.||||++.... ...+.+|.+++... +||||+++++++.... ...+
T Consensus 35 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 111 (337)
T 3mdy_A 35 IAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTE--EASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLY 111 (337)
T ss_dssp HHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGG--HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEE
T ss_pred cccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEeccc--cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceE
Confidence 3467999999999999999999875 8899999986443 34556666666655 9999999999887632 5789
Q ss_pred EEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCC-----CCCeEecCCCCCCeeeCCCCcEEe
Q 004248 607 LVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHEC-----TLPFVHRDVQASSILLDDKFEVRL 681 (766)
Q Consensus 607 lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~-----~~~iiHrDlKp~NILl~~~~~~kl 681 (766)
+||||+++|+|.+++... .+++.++..++.|++.||+|||+.+ .++|+||||||+|||++.++.+||
T Consensus 112 lv~e~~~~g~L~~~l~~~--------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl 183 (337)
T 3mdy_A 112 LITDYHENGSLYDYLKST--------TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCI 183 (337)
T ss_dssp EEECCCTTCBHHHHHHHC--------CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEE
T ss_pred EEEeccCCCcHHHHhhcc--------CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEE
Confidence 999999999999999653 3899999999999999999999752 348999999999999999999999
Q ss_pred ccchhhhhcCCC-------CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcC
Q 004248 682 GSLSEVCAQGGD-------AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFN 742 (766)
Q Consensus 682 ~DFG~a~~~~~~-------~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG 742 (766)
+|||+++..... .....+|..|+|||.+........ ...+.++|||||||++|||+||
T Consensus 184 ~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~---~~~~~~~DiwslG~il~el~tg 248 (337)
T 3mdy_A 184 ADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNH---FQSYIMADMYSFGLILWEVARR 248 (337)
T ss_dssp CCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTC---THHHHHHHHHHHHHHHHHHHTT
T ss_pred EeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCcc---ccCccccchHHHHHHHHHHHhc
Confidence 999999765322 123468999999998765433210 0123469999999999999999
No 220
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=2.8e-34 Score=312.69 Aligned_cols=197 Identities=17% Similarity=0.235 Sum_probs=163.5
Q ss_pred hCCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC---HHHHHHHHHHHhhcCCCCcccceeEEEecCC-----
Q 004248 533 TGDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK---TEAYLLELDFFSKVSHARLVPLLGHCMEREN----- 603 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~---~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~----- 603 (766)
.++|...+.||+|+||.||+|+. .+|+.||||++...... .+++.+|+.++++++||||+++++++.....
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 102 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 102 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence 35788899999999999999995 57999999999654332 4678999999999999999999998765321
Q ss_pred cEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEecc
Q 004248 604 EKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGS 683 (766)
Q Consensus 604 ~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~D 683 (766)
..|+||||++ |+|.+++.. .+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 103 ~~~lv~e~~~-~~l~~~~~~---------~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~D 169 (353)
T 3coi_A 103 DFYLVMPFMQ-TDLQKIMGL---------KFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILD 169 (353)
T ss_dssp CCEEEEECCS-EEGGGTTTS---------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECS
T ss_pred eEEEEecccc-CCHHHHhcC---------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEee
Confidence 3599999998 699887742 389999999999999999999998 999999999999999999999999
Q ss_pred chhhhhcCCCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCCc
Q 004248 684 LSEVCAQGGDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSSR 750 (766)
Q Consensus 684 FG~a~~~~~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~~ 750 (766)
||+++..........+|+.|+|||....... ++.++|||||||++|||+||+.||...+
T Consensus 170 fg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~--------~~~~~Di~slG~il~el~~g~~pf~~~~ 228 (353)
T 3coi_A 170 FGLARHADAEMTGYVVTRWYRAPEVILSWMH--------YNQTVDIWSVGCIMAEMLTGKTLFKGKD 228 (353)
T ss_dssp TTCTTC--------CCSBCCSCHHHHSCCSC--------CCTTHHHHHHHHHHHHHHHSSCSSBSSC
T ss_pred cccccCCCCCccccccCcCcCCHHHHhCcCC--------CCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 9999877655566678999999998754221 5789999999999999999999996543
No 221
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=7.8e-33 Score=323.28 Aligned_cols=303 Identities=25% Similarity=0.219 Sum_probs=185.6
Q ss_pred CEEEEEcCCCCcCCCCCCCCccchhhhccCCCCCEEecCCCCCCCCCchhhhhCCCCCCEEEccCCCCCccCCcccCCCC
Q 004248 87 SVVGINISGFRRTRLGSQNPRFAADALVNLTHLASFNASRFLLPGSIPDWLGQQLPTLQALDLRSCSISGVIPFSLGNLT 166 (766)
Q Consensus 87 ~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~L~ls~n~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~ 166 (766)
+++.+++++..... +.+..+.++++|++|++++|.+.+-.|..+.. +++|++|+|++|.+++..|..|++++
T Consensus 33 ~l~~L~Ls~n~l~~-------~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~-l~~L~~L~Ls~n~l~~~~p~~~~~l~ 104 (606)
T 3vq2_A 33 STKNIDLSFNPLKI-------LKSYSFSNFSELQWLDLSRCEIETIEDKAWHG-LHHLSNLILTGNPIQSFSPGSFSGLT 104 (606)
T ss_dssp TCCEEECTTSCCCE-------ECTTTTTTCTTCCEEECTTCCCCEECTTTTTT-CTTCCEEECTTCCCCCCCTTSSTTCT
T ss_pred CcCEEECCCCCcCE-------eChhhccCCccCcEEeCCCCcccccCHHHhhc-hhhcCEeECCCCcccccChhhcCCcc
Confidence 57778887754321 12235667777777777777776655555543 77777777777777776677777777
Q ss_pred CCcEEEeecCcCCCCCCccccCCCCCCEEEccCCCCCC-CCCcccCCCCCCCEEeccCCcCCCCCCCCC-----------
Q 004248 167 NLTSLYLSDNGLTGTIPSSLGQLSVLSVLDLSRNSLTG-NIPTSFGLLKNLSSLDISSNYLTGSIPPGL----------- 234 (766)
Q Consensus 167 ~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l----------- 234 (766)
+|++|+|++|.+++..|..++++++|++|+|++|++++ .+|..|+++++|++|+|++|++++..|..+
T Consensus 105 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~ 184 (606)
T 3vq2_A 105 SLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNL 184 (606)
T ss_dssp TCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCC
T ss_pred cCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccc
Confidence 77777777777776655667777777777777777765 457777777777777777776654433322
Q ss_pred --------------------------------------------------------------------------------
Q 004248 235 -------------------------------------------------------------------------------- 234 (766)
Q Consensus 235 -------------------------------------------------------------------------------- 234 (766)
T Consensus 185 ~L~l~~n~l~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~ 264 (606)
T 3vq2_A 185 SLDMSLNPIDFIQDQAFQGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTID 264 (606)
T ss_dssp EEECTTCCCCEECTTTTTTCEEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEE
T ss_pred eeeccCCCcceeCcccccCceeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHh
Confidence
Q ss_pred ---------------------------------------CCCCCccEEEccCCCCCCCCcc-------------------
Q 004248 235 ---------------------------------------GTLSKLQYLNVSNNSLASSIPA------------------- 256 (766)
Q Consensus 235 ---------------------------------------~~l~~L~~L~Ls~N~l~~~~p~------------------- 256 (766)
..+++|++|++++|.+ +.+|.
T Consensus 265 ~l~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~l~~l~~~~~L~~L~l~~n~l-~~lp~~~l~~L~~L~l~~n~~~~~ 343 (606)
T 3vq2_A 265 EFRLTYTNDFSDDIVKFHCLANVSAMSLAGVSIKYLEDVPKHFKWQSLSIIRCQL-KQFPTLDLPFLKSLTLTMNKGSIS 343 (606)
T ss_dssp EEEECCCTTCCGGGGSCGGGTTCSEEEEESCCCCCCCCCCTTCCCSEEEEESCCC-SSCCCCCCSSCCEEEEESCSSCEE
T ss_pred heeccccccccccccccccCCCCCEEEecCccchhhhhccccccCCEEEcccccC-cccccCCCCccceeeccCCcCccc
Confidence 1222333333333333 22221
Q ss_pred -ccCCCCCCCEEEccCCcCCcc--CCcccCCCCCCCEEEccCccCccccCCCccCCCCcccEEEccCCCCCCCCC-cccC
Q 004248 257 -QLGDLDSLVDLDLSMNSLSGS--VPSELRGLRSLQKFVIGNNFLSGNLSVNLFPTVSQLQIIVLRQNGFTGPPP-DVLW 332 (766)
Q Consensus 257 -~l~~l~~L~~L~Ls~N~l~g~--~p~~l~~l~~L~~L~ls~N~l~g~~~~~~~~~l~~L~~L~L~~N~l~~~~p-~~l~ 332 (766)
.++.+++|++|++++|++++. +|..+..+++|++|++++|.+++ +| ..|..+++|+.|++++|++++.+| ..+.
T Consensus 344 ~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~-~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 421 (606)
T 3vq2_A 344 FKKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MS-ANFMGLEELQHLDFQHSTLKRVTEFSAFL 421 (606)
T ss_dssp CCCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-EC-CCCTTCTTCCEEECTTSEEESTTTTTTTT
T ss_pred hhhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-ch-hhccCCCCCCeeECCCCccCCccChhhhh
Confidence 234566777777777777755 36666677777777777776654 33 334566666666666666666655 4566
Q ss_pred CCCCCCEEEccCCCCCCCCCcccccCCCCCcEEEccCCcCccC-CCc---CCCCCCEEeccCCcCccccChhh
Q 004248 333 SMPQLRLLDISRNNFTGPLPNSRSNVNTSTVELNISQNMFYGG-LTP---VLGRFRLVDLSGNYFEGRVPEYV 401 (766)
Q Consensus 333 ~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~L~ls~N~l~g~-~~~---~l~~l~~ldLs~N~l~g~~p~~~ 401 (766)
.+++|++|++++|++++.+|.. +..+++|+.|++++|.+.+. +|. .+++|+.|+|++|++++..|..+
T Consensus 422 ~l~~L~~L~l~~n~l~~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~ 493 (606)
T 3vq2_A 422 SLEKLLYLDISYTNTKIDFDGI-FLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVF 493 (606)
T ss_dssp TCTTCCEEECTTSCCEECCTTT-TTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTT
T ss_pred ccccCCEEECcCCCCCccchhh-hcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhh
Confidence 6666666666666666655533 23445666666666666653 332 24556666666666666555544
No 222
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.9e-34 Score=303.04 Aligned_cols=195 Identities=19% Similarity=0.295 Sum_probs=164.0
Q ss_pred CCCccc-eeecCCcceEEEEEE---cCCcEEEEEEeecccc--CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEE
Q 004248 535 DFSDAN-LIKNGHSGDLFRGIL---EGGIPVVIKRIDLQSV--KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLV 608 (766)
Q Consensus 535 ~~~~~~-~ig~G~~g~Vy~~~~---~~g~~vavK~l~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV 608 (766)
+|...+ .||+|+||.||+|.. .++..||||+++.... ..+++.+|++++++++||||+++++++. .+..++|
T Consensus 10 ~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~--~~~~~lv 87 (287)
T 1u59_A 10 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ--AEALMLV 87 (287)
T ss_dssp GEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE--SSSEEEE
T ss_pred HhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEec--CCCcEEE
Confidence 455555 899999999999984 3678999999976432 2567999999999999999999999873 3579999
Q ss_pred EeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhh
Q 004248 609 YKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVC 688 (766)
Q Consensus 609 ~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~ 688 (766)
|||+++|+|.+++.... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 88 ~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~~~ 158 (287)
T 1u59_A 88 MEMAGGGPLHKFLVGKR------EEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSK 158 (287)
T ss_dssp EECCTTEEHHHHHTTCT------TTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCE
T ss_pred EEeCCCCCHHHHHHhCC------ccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECccccee
Confidence 99999999999996543 2489999999999999999999998 99999999999999999999999999998
Q ss_pred hcCCC------CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCCC
Q 004248 689 AQGGD------AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLSS 749 (766)
Q Consensus 689 ~~~~~------~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~~ 749 (766)
..... .....+|..|+|||...... ++.++|||||||++|||+| |+.||...
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~Di~slG~il~ellt~g~~p~~~~ 217 (287)
T 1u59_A 159 ALGADDSYYTARSAGKWPLKWYAPECINFRK---------FSSRSDVWSYGVTMWEALSYGQKPYKKM 217 (287)
T ss_dssp ECTTCSCEECCCCSSCCCGGGCCHHHHHHCE---------ECHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred eeccCcceeeccccccccccccCHHHhccCC---------CCchhhHHHHHHHHHHHHcCCCCCcccC
Confidence 66322 12234578899999874332 5789999999999999999 99999543
No 223
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=2.6e-34 Score=306.84 Aligned_cols=200 Identities=19% Similarity=0.271 Sum_probs=159.1
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeecccc----CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV----KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLV 608 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~----~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV 608 (766)
++|...+.||+|+||.||+|.. .+|+.||||++..... ..+++.+|++++++++||||+++++++.. ++..++|
T Consensus 32 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~lv 110 (310)
T 2wqm_A 32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIE-DNELNIV 110 (310)
T ss_dssp GGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEE-TTEEEEE
T ss_pred cceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEc-CCcEEEE
Confidence 4688899999999999999995 6799999999975322 25678999999999999999999998876 5689999
Q ss_pred EeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhh
Q 004248 609 YKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVC 688 (766)
Q Consensus 609 ~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~ 688 (766)
|||+++|+|.+++..... ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 111 ~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~ 184 (310)
T 2wqm_A 111 LELADAGDLSRMIKHFKK---QKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGR 184 (310)
T ss_dssp EECCCSCBHHHHHHHHHH---TTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC----
T ss_pred EecCCCCCHHHHHHHhcc---cccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEecccee
Confidence 999999999999864221 113489999999999999999999998 99999999999999999999999999997
Q ss_pred hcCCC---CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 689 AQGGD---AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 689 ~~~~~---~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
..... .....++..|+|||...... ++.++|||||||++|||+||+.||...
T Consensus 185 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~Dv~slG~il~~l~~g~~p~~~~ 239 (310)
T 2wqm_A 185 FFSSKTTAAHSLVGTPYYMSPERIHENG---------YNFKSDIWSLGCLLYEMAALQSPFYGD 239 (310)
T ss_dssp --------------CCSSCCHHHHTTCC---------CCHHHHHHHHHHHHHHHHHSSCTTC--
T ss_pred eecCCCccccccCCCeeEeChHHhCCCC---------CCchhhHHHHHHHHHHHHhCCCCCccc
Confidence 65322 23346789999999876543 478999999999999999999999643
No 224
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.3e-34 Score=309.59 Aligned_cols=196 Identities=19% Similarity=0.354 Sum_probs=160.1
Q ss_pred CCCCccceeecCCcceEEEEEEcC-----CcEEEEEEeeccccC--HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGILEG-----GIPVVIKRIDLQSVK--TEAYLLELDFFSKVSHARLVPLLGHCMERENEKF 606 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~~~-----g~~vavK~l~~~~~~--~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~ 606 (766)
++|...+.||+|+||.||+|.... +..||||.+...... .+++.+|++++++++||||+++++++.. .+..+
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~ 122 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISK-YKPMM 122 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS-SSSEE
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEec-CCCcE
Confidence 346667999999999999998532 346999999754322 4579999999999999999999997765 56899
Q ss_pred EEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchh
Q 004248 607 LVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSE 686 (766)
Q Consensus 607 lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~ 686 (766)
+||||+++|+|.+++..... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 123 lv~e~~~~~~L~~~l~~~~~------~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~ 193 (333)
T 1mqb_A 123 IITEYMENGALDKFLREKDG------EFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGL 193 (333)
T ss_dssp EEEECCTTEEHHHHHHHTTT------CSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC
T ss_pred EEEeCCCCCcHHHHHHhCCC------CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECCCCc
Confidence 99999999999999976432 489999999999999999999998 999999999999999999999999999
Q ss_pred hhhcCCCC------ccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCC
Q 004248 687 VCAQGGDA------HQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLS 748 (766)
Q Consensus 687 a~~~~~~~------~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~ 748 (766)
++...... ....+|..|+|||...... ++.++|||||||++|||+| |+.||..
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~Di~slG~il~ellt~g~~pf~~ 253 (333)
T 1mqb_A 194 SRVLEDDPEATYTTSGGKIPIRWTAPEAISYRK---------FTSASDVWSFGIVMWEVMTYGERPYWE 253 (333)
T ss_dssp -----------------CCCGGGSCHHHHHSCC---------CCHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred chhhccccccccccCCCCccccccCchhcccCC---------CCchhhhHHHHHHHHHHHcCCCCCccc
Confidence 98753221 1223467899999875443 4789999999999999999 9999954
No 225
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=5.4e-34 Score=304.82 Aligned_cols=198 Identities=18% Similarity=0.267 Sum_probs=166.1
Q ss_pred HhCCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccCHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEe
Q 004248 532 ATGDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYK 610 (766)
Q Consensus 532 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~E 610 (766)
..++|+..+.||+|+||.||+|.. .+|+.||||.+.... ..+++.+|++++++++||||+++++++.. ++..++|||
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e 104 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES-DLQEIIKEISIMQQCDSPHVVKYYGSYFK-NTDLWIVME 104 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS-CCHHHHHHHHHHHTCCCTTBCCEEEEEEE-TTEEEEEEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH-HHHHHHHHHHHHHhCCCCCCccEEEEEEe-CCEEEEEee
Confidence 346789999999999999999995 468999999997543 35679999999999999999999998876 568999999
Q ss_pred eCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhc
Q 004248 611 YMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQ 690 (766)
Q Consensus 611 y~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~ 690 (766)
|+++|+|.+++.... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 105 ~~~~~~L~~~~~~~~------~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~ 175 (314)
T 3com_A 105 YCGAGSVSDIIRLRN------KTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQL 175 (314)
T ss_dssp CCTTEEHHHHHHHHT------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred cCCCCCHHHHHHhcC------CCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeecccchhh
Confidence 999999999997432 2489999999999999999999998 9999999999999999999999999999765
Q ss_pred CCC---CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 691 GGD---AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 691 ~~~---~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
... .....+|..|+|||...... ++.++|||||||++|||+||+.||...
T Consensus 176 ~~~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~Di~slG~il~~l~~g~~p~~~~ 228 (314)
T 3com_A 176 TDTMAKRNTVIGTPFWMAPEVIQEIG---------YNCVADIWSLGITAIEMAEGKPPYADI 228 (314)
T ss_dssp BTTBSCBCCCCSCGGGCCHHHHSSSC---------BCTTHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred hhhccccCccCCCCCccChhhcCCCC---------CCccccHHHHHHHHHHHHhCCCCCCCC
Confidence 332 23456789999999876543 478999999999999999999999643
No 226
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=1.3e-34 Score=313.55 Aligned_cols=205 Identities=17% Similarity=0.159 Sum_probs=166.2
Q ss_pred hCCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC--HHHHHHHHHH-HhhcCCCCcccceeEEEecCCcEEEE
Q 004248 533 TGDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK--TEAYLLELDF-FSKVSHARLVPLLGHCMERENEKFLV 608 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~--~~~~~~E~~~-l~~l~H~niv~l~~~~~~~~~~~~lV 608 (766)
.++|+..+.||+|+||.||+|+. .+|+.||||++...... ..++..|..+ ++.++||||+++++++.. ++..|+|
T Consensus 50 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~-~~~~~lv 128 (340)
T 3an0_A 50 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFR-EGDVWIC 128 (340)
T ss_dssp SSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEEC-SSCEEEE
T ss_pred hhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEe-CCcEEEE
Confidence 46788899999999999999995 67999999999764333 4456666665 788899999999998876 5689999
Q ss_pred EeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhh
Q 004248 609 YKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVC 688 (766)
Q Consensus 609 ~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~ 688 (766)
|||+++ +|.+++..... ....+++..+..++.||+.||+|||++ .+|+||||||+|||++.++.+||+|||+++
T Consensus 129 ~e~~~~-~L~~~l~~~~~---~~~~l~~~~~~~i~~qi~~~l~~lH~~--~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~ 202 (340)
T 3an0_A 129 MELMDT-SLDKFYKQVID---KGQTIPEDILGKIAVSIVKALEHLHSK--LSVIHRDVKPSNVLINALGQVKMCDFGISG 202 (340)
T ss_dssp ECCCSE-EHHHHHHHHHH---TSCCCCHHHHHHHHHHHHHHHHHHHHH--TCCCCCSCCSTTEEECSTTCEEECCCSHHH
T ss_pred HHHhhC-cHHHHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHhhc--CCeecCCCCHHHEEECCCCCEEEeeCCCce
Confidence 999985 99998864211 113599999999999999999999973 289999999999999999999999999998
Q ss_pred hcCCCC--ccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 689 AQGGDA--HQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 689 ~~~~~~--~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
...... ....+|..|+|||.+.....+. . ++.++|||||||++|||+||+.||...
T Consensus 203 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~-~----~~~~~Di~slG~il~el~tg~~p~~~~ 260 (340)
T 3an0_A 203 YLVDSVAKTIDAGCKPYMAPERINPELNQK-G----YSVKSDIWSLGITMIELAILRFPYDSW 260 (340)
T ss_dssp HHSCHHHHHHSSCCCCCCCHHHHSCCTTCC-S----CCHHHHHHHHHHHHHHHHHTSCSSCCC
T ss_pred ecccccccccCCCCccccCccccccccccC-C----CCchhhHHHHHHHHHHHHHCCCCCccc
Confidence 764321 2246899999999864321111 1 578999999999999999999999643
No 227
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=7.9e-35 Score=312.49 Aligned_cols=207 Identities=19% Similarity=0.285 Sum_probs=169.9
Q ss_pred HHHhCCCCccceeecCCcceEEEEEEc------CCcEEEEEEeeccccC--HHHHHHHHHHHhhcCCCCcccceeEEEec
Q 004248 530 LAATGDFSDANLIKNGHSGDLFRGILE------GGIPVVIKRIDLQSVK--TEAYLLELDFFSKVSHARLVPLLGHCMER 601 (766)
Q Consensus 530 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~--~~~~~~E~~~l~~l~H~niv~l~~~~~~~ 601 (766)
....++|...+.||+|+||.||+|+.. +++.||||.+...... ..++.+|++++++++||||+++++++.+
T Consensus 21 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~- 99 (322)
T 1p4o_A 21 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQ- 99 (322)
T ss_dssp BCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECS-
T ss_pred cchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEcc-
Confidence 334567899999999999999999843 4789999999754332 4579999999999999999999998765
Q ss_pred CCcEEEEEeeCCCCChhhhhhccCCC---CCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCc
Q 004248 602 ENEKFLVYKYMPNGDLSSSLYRKTNT---EDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFE 678 (766)
Q Consensus 602 ~~~~~lV~Ey~~~GsL~~~l~~~~~~---~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~ 678 (766)
.+..++||||+++|+|.+++...+.. ......+++..+..++.|++.||+|||++ +|+||||||+||+++.++.
T Consensus 100 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NIli~~~~~ 176 (322)
T 1p4o_A 100 GQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFT 176 (322)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEECTTCC
T ss_pred CCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceEEEcCCCe
Confidence 56789999999999999999753210 00113479999999999999999999998 9999999999999999999
Q ss_pred EEeccchhhhhcCCC-----CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCCC
Q 004248 679 VRLGSLSEVCAQGGD-----AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLSS 749 (766)
Q Consensus 679 ~kl~DFG~a~~~~~~-----~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~~ 749 (766)
+||+|||+++..... .....+|..|+|||...... ++.++|||||||++|||+| |+.||...
T Consensus 177 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~Di~slG~il~el~~~g~~p~~~~ 244 (322)
T 1p4o_A 177 VKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGV---------FTTYSDVWSFGVVLWEIATLAEQPYQGL 244 (322)
T ss_dssp EEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCC---------CCHHHHHHHHHHHHHHHHHTSCCTTTTS
T ss_pred EEECcCccccccccccccccccCCCCCCCccChhhhccCC---------CCchhhHHHHHHHHHHHHhcCCCccccC
Confidence 999999999765321 12335678899999875433 4789999999999999999 88898543
No 228
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=3.3e-34 Score=311.80 Aligned_cols=197 Identities=16% Similarity=0.217 Sum_probs=165.9
Q ss_pred hCCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC--HHHHHHHHHHHhhcCCCCcccceeEEEec----CCcE
Q 004248 533 TGDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK--TEAYLLELDFFSKVSHARLVPLLGHCMER----ENEK 605 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~--~~~~~~E~~~l~~l~H~niv~l~~~~~~~----~~~~ 605 (766)
.++|...+.||+|+||.||+|.. .+|+.||||++...... ..++.+|++++++++||||+++++++... ....
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 89 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV 89 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence 46788999999999999999995 47899999999643322 45788999999999999999999977542 2568
Q ss_pred EEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccch
Q 004248 606 FLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLS 685 (766)
Q Consensus 606 ~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG 685 (766)
|+||||++ |+|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 90 ~lv~e~~~-~~L~~~~~~~--------~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg 157 (353)
T 2b9h_A 90 YIIQELMQ-TDLHRVISTQ--------MLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFG 157 (353)
T ss_dssp EEEECCCS-EEHHHHHHHC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCT
T ss_pred EEEEeccC-ccHHHHHhhc--------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEecc
Confidence 99999998 6999998652 389999999999999999999998 99999999999999999999999999
Q ss_pred hhhhcCCC-------------CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 686 EVCAQGGD-------------AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 686 ~a~~~~~~-------------~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
+++..... .....+|+.|+|||.+..... ++.++|||||||++|||++|+.||...
T Consensus 158 ~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~--------~~~~~Di~slG~il~~l~~g~~pf~~~ 226 (353)
T 2b9h_A 158 LARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAK--------YSRAMDVWSCGCILAELFLRRPIFPGR 226 (353)
T ss_dssp TCEECC----------------CCCCCCGGGCCHHHHHSCCC--------CCHHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred cccccccccccccCccccccchhhccccccccCCeeeccCCC--------ccchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 99765321 122467999999997643221 578999999999999999999999644
No 229
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=2.4e-33 Score=315.82 Aligned_cols=276 Identities=20% Similarity=0.228 Sum_probs=191.9
Q ss_pred CCCCEEecCCCCCCCCCchhhhhCCCCCCEEEccCCCCCccC-CcccCCCCCCcEEEeecCcCCCCCCccccCCCCCCEE
Q 004248 117 THLASFNASRFLLPGSIPDWLGQQLPTLQALDLRSCSISGVI-PFSLGNLTNLTSLYLSDNGLTGTIPSSLGQLSVLSVL 195 (766)
Q Consensus 117 ~~L~~L~ls~n~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~-p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L 195 (766)
++|++|++++|.+.+..|..+.. +++|++|+|++|.+.+.+ |..|.++++|++|+|++|++++..|..|+++++|++|
T Consensus 30 ~~l~~L~Ls~n~i~~~~~~~~~~-l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 108 (455)
T 3v47_A 30 AHVNYVDLSLNSIAELNETSFSR-LQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVL 108 (455)
T ss_dssp TTCCEEECCSSCCCEECTTTTSS-CTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEE
T ss_pred CccCEEEecCCccCcCChhHhcc-CccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEE
Confidence 68999999999998877877765 999999999999998665 5679999999999999999998889999999999999
Q ss_pred EccCCCCCCCCCcc--cCCCCCCCEEeccCCcCCCCCCCC-CCCCCCccEEEccCCCCCCCCccccCCC-----------
Q 004248 196 DLSRNSLTGNIPTS--FGLLKNLSSLDISSNYLTGSIPPG-LGTLSKLQYLNVSNNSLASSIPAQLGDL----------- 261 (766)
Q Consensus 196 ~Ls~N~l~~~~p~~--~~~l~~L~~L~Ls~N~l~~~~p~~-l~~l~~L~~L~Ls~N~l~~~~p~~l~~l----------- 261 (766)
+|++|++++.+|.. |..+++|++|+|++|.+++..|.. +.++++|++|++++|.+++..|..+..+
T Consensus 109 ~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~ 188 (455)
T 3v47_A 109 TLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLS 188 (455)
T ss_dssp ECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECT
T ss_pred eCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhccccccccccccc
Confidence 99999999866655 999999999999999999887876 8999999999999999999888777654
Q ss_pred -----------------------CCCCEEEccCCcCCccCCcccCCC---------------------------------
Q 004248 262 -----------------------DSLVDLDLSMNSLSGSVPSELRGL--------------------------------- 285 (766)
Q Consensus 262 -----------------------~~L~~L~Ls~N~l~g~~p~~l~~l--------------------------------- 285 (766)
++|++|++++|++++.+|..+..+
T Consensus 189 ~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~ 268 (455)
T 3v47_A 189 SITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFT 268 (455)
T ss_dssp TCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTT
T ss_pred cCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchhhhccCcccc
Confidence 455566666665554444332111
Q ss_pred ------CCCCEEEccCccCccccCCCccCCCCcccEEEccCCCCCCCCCcccCCCCCCCEEEccCCCCCCCCCcccccCC
Q 004248 286 ------RSLQKFVIGNNFLSGNLSVNLFPTVSQLQIIVLRQNGFTGPPPDVLWSMPQLRLLDISRNNFTGPLPNSRSNVN 359 (766)
Q Consensus 286 ------~~L~~L~ls~N~l~g~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~ 359 (766)
++|+.|++++|.+++.+|. .|..+++|+.|+|++|++++.+|..|..+++|++|+|++|++++..|. .+..+
T Consensus 269 ~~~~~~~~L~~L~l~~n~l~~~~~~-~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~~l 346 (455)
T 3v47_A 269 FKGLEASGVKTCDLSKSKIFALLKS-VFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSR-MFENL 346 (455)
T ss_dssp TGGGTTSCCCEEECCSSCCCEECTT-TTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGG-GGTTC
T ss_pred cccccccCceEEEecCccccccchh-hcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChh-HhcCc
Confidence 3444444444444433332 234445555555555555554454555555555555555555433332 22334
Q ss_pred CCCcEEEccCCcCccCCCc---CCCCCCEEeccCCcCcc
Q 004248 360 TSTVELNISQNMFYGGLTP---VLGRFRLVDLSGNYFEG 395 (766)
Q Consensus 360 ~~l~~L~ls~N~l~g~~~~---~l~~l~~ldLs~N~l~g 395 (766)
++|+.|++++|.+.+..|. .+++|+.|||++|++++
T Consensus 347 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 385 (455)
T 3v47_A 347 DKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKS 385 (455)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSC
T ss_pred ccCCEEECCCCcccccChhhccccccccEEECCCCcccc
Confidence 4455555555555444332 23444555555555544
No 230
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=2.9e-34 Score=335.44 Aligned_cols=189 Identities=16% Similarity=0.249 Sum_probs=159.7
Q ss_pred ceeecCCcceEEEEEE---cCCcEEEEEEeeccccC---HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEeeCC
Q 004248 540 NLIKNGHSGDLFRGIL---EGGIPVVIKRIDLQSVK---TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMP 613 (766)
Q Consensus 540 ~~ig~G~~g~Vy~~~~---~~g~~vavK~l~~~~~~---~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey~~ 613 (766)
+.||+|+||.||+|.. .+++.||||+++..... .++|.+|+++|++++|||||+++++|.. +..++|||||+
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~--~~~~lv~E~~~ 452 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA--ESWMLVMEMAE 452 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES--SSEEEEEECCT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec--CCEEEEEEccC
Confidence 5799999999999974 35689999999764432 5789999999999999999999998753 46899999999
Q ss_pred CCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcCCC
Q 004248 614 NGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGD 693 (766)
Q Consensus 614 ~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~~~ 693 (766)
+|+|.+++...+ .+++.++..|+.||+.||+|||++ +||||||||+|||++.++.+||+|||+++.....
T Consensus 453 ~g~L~~~l~~~~-------~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~ 522 (635)
T 4fl3_A 453 LGPLNKYLQQNR-------HVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRAD 522 (635)
T ss_dssp TEEHHHHHHHCT-------TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-
T ss_pred CCCHHHHHhhCC-------CCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCccccccC
Confidence 999999997653 389999999999999999999998 9999999999999999999999999999876322
Q ss_pred ------CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCCC
Q 004248 694 ------AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLSS 749 (766)
Q Consensus 694 ------~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~~ 749 (766)
.....+|..|+|||.+.... ++.++|||||||++|||+| |+.||...
T Consensus 523 ~~~~~~~~~~~~t~~y~APE~~~~~~---------~~~~sDvwSlGv~l~ellt~G~~Pf~~~ 576 (635)
T 4fl3_A 523 ENYYKAQTHGKWPVKWYAPECINYYK---------FSSKSDVWSFGVLMWEAFSYGQKPYRGM 576 (635)
T ss_dssp ------------CGGGSCHHHHHHCC---------CCHHHHHHHHHHHHHHHHTTTCCSSTTC
T ss_pred ccccccccCCCCceeeeChhhhcCCC---------CCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 12234567899999875433 5789999999999999998 99999543
No 231
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=9.8e-34 Score=301.39 Aligned_cols=201 Identities=15% Similarity=0.196 Sum_probs=166.9
Q ss_pred hCCCCccceeecCCcceEEEEEE-cCCcEEEEEEeecccc-----CHHHHHHHHHHHhhcCCCCcccceeEEEe-cCCcE
Q 004248 533 TGDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV-----KTEAYLLELDFFSKVSHARLVPLLGHCME-RENEK 605 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-----~~~~~~~E~~~l~~l~H~niv~l~~~~~~-~~~~~ 605 (766)
.++|...+.||+|+||.||+|.. .+++.||||.+..... ..+.+.+|++++++++||||+++++++.. ..+..
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 46899999999999999999995 5789999999975431 25679999999999999999999998753 23578
Q ss_pred EEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccch
Q 004248 606 FLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLS 685 (766)
Q Consensus 606 ~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG 685 (766)
++||||+++| |.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 84 ~lv~e~~~~~-l~~~~~~~~~-----~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~dfg 154 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEMLDSVPE-----KRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALG 154 (305)
T ss_dssp EEEEECCSEE-HHHHHHHSTT-----CSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCT
T ss_pred EEEehhccCC-HHHHHHhCcc-----cccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeeccc
Confidence 9999999976 7777765432 3589999999999999999999998 99999999999999999999999999
Q ss_pred hhhhcCCC-----CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 686 EVCAQGGD-----AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 686 ~a~~~~~~-----~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
+++..... .....+|..|+|||........ .+.++|||||||++|||+||+.||...
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-------~~~~~Di~slG~il~~l~~g~~p~~~~ 216 (305)
T 2wtk_C 155 VAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTF-------SGFKVDIWSAGVTLYNITTGLYPFEGD 216 (305)
T ss_dssp TCEECCTTCSSCEECCCCSCGGGCCHHHHTCCSCE-------ESHHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred cccccCccccccccccCCCCCCCcChhhccCcccC-------CcchhhHHHHHHHHHHHHhCCCCCCCc
Confidence 99765321 2234578999999987543221 367999999999999999999999643
No 232
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=3.7e-34 Score=317.72 Aligned_cols=201 Identities=14% Similarity=0.226 Sum_probs=153.1
Q ss_pred CCc-cceeecCCcceEEEEEEc---CCcEEEEEEeeccccCHHHHHHHHHHHhhcCCCCcccceeEEEe-cCCcEEEEEe
Q 004248 536 FSD-ANLIKNGHSGDLFRGILE---GGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCME-RENEKFLVYK 610 (766)
Q Consensus 536 ~~~-~~~ig~G~~g~Vy~~~~~---~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~-~~~~~~lV~E 610 (766)
|+. .++||+|+||.||+|+.. +++.||||++..... .+.+.+|+++|++++|||||++++++.. .+...|+|||
T Consensus 22 y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e 100 (405)
T 3rgf_A 22 FEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI-SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFD 100 (405)
T ss_dssp EECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC-CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEE
T ss_pred hhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC-CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEe
Confidence 443 458999999999999954 578999999965432 4578899999999999999999998864 3457899999
Q ss_pred eCCCCChhhhhhccCC--CCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeee----CCCCcEEeccc
Q 004248 611 YMPNGDLSSSLYRKTN--TEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILL----DDKFEVRLGSL 684 (766)
Q Consensus 611 y~~~GsL~~~l~~~~~--~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl----~~~~~~kl~DF 684 (766)
|++ |+|.+++..... .......+++..++.|+.||+.||+|||+. +|+||||||+|||+ +.++.+||+||
T Consensus 101 ~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Df 176 (405)
T 3rgf_A 101 YAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADM 176 (405)
T ss_dssp CCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTTCEEECCT
T ss_pred CCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCCcEEEEEC
Confidence 997 588888763221 001123489999999999999999999998 99999999999999 77899999999
Q ss_pred hhhhhcCC------CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 685 SEVCAQGG------DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 685 G~a~~~~~------~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
|+++.... ......+|+.|+|||.+..... ++.++|||||||++|||+||+.||...
T Consensus 177 g~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~--------~~~~~DiwSlG~il~ell~g~~pf~~~ 239 (405)
T 3rgf_A 177 GFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARH--------YTKAIDIWAIGCIFAELLTSEPIFHCR 239 (405)
T ss_dssp TCCC----------------CCCTTCCHHHHTTCCS--------CCHHHHHHHHHHHHHHHHHSSCTTCCC
T ss_pred CCceecCCCCcccccCCCceecCcccCchhhcCCCc--------ccchhhhHHHHHHHHHHHhCCCCCCCc
Confidence 99986532 2234578999999998765332 578999999999999999999999543
No 233
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=2.1e-34 Score=310.79 Aligned_cols=205 Identities=20% Similarity=0.269 Sum_probs=168.1
Q ss_pred HhCCCCccceeecCCcceEEEEEEc-CC-----cEEEEEEeecccc--CHHHHHHHHHHHhhc-CCCCcccceeEEEecC
Q 004248 532 ATGDFSDANLIKNGHSGDLFRGILE-GG-----IPVVIKRIDLQSV--KTEAYLLELDFFSKV-SHARLVPLLGHCMERE 602 (766)
Q Consensus 532 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~g-----~~vavK~l~~~~~--~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~ 602 (766)
..++|...+.||+|+||.||+|... ++ +.||||.+..... ..+.+.+|+++++++ +||||+++++++.. +
T Consensus 44 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~-~ 122 (333)
T 2i1m_A 44 PRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTH-G 122 (333)
T ss_dssp CTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-S
T ss_pred CHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEec-C
Confidence 3467889999999999999999853 22 4799999975432 256799999999999 89999999998765 5
Q ss_pred CcEEEEEeeCCCCChhhhhhccCCC-------CCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCC
Q 004248 603 NEKFLVYKYMPNGDLSSSLYRKTNT-------EDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDD 675 (766)
Q Consensus 603 ~~~~lV~Ey~~~GsL~~~l~~~~~~-------~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~ 675 (766)
+..++||||+++|+|.+++...... ......+++..+..++.|++.||+|||+. +|+||||||+||+++.
T Consensus 123 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~ 199 (333)
T 2i1m_A 123 GPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTN 199 (333)
T ss_dssp SSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGCEEEG
T ss_pred CceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccceEEECC
Confidence 6899999999999999999753210 00113489999999999999999999998 9999999999999999
Q ss_pred CCcEEeccchhhhhcCCC-----CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCCC
Q 004248 676 KFEVRLGSLSEVCAQGGD-----AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLSS 749 (766)
Q Consensus 676 ~~~~kl~DFG~a~~~~~~-----~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~~ 749 (766)
++.+||+|||+++..... .....+|..|+|||...... ++.++|||||||++|||+| |+.||...
T Consensus 200 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~Di~slG~il~el~t~g~~p~~~~ 270 (333)
T 2i1m_A 200 GHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCV---------YTVQSDVWSYGILLWEIFSLGLNPYPGI 270 (333)
T ss_dssp GGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCC---------CCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred CCeEEECccccccccccccceeecCCCCCCccccCHHHhccCC---------CChHHHHHHHHHHHHHHHcCCCCCCccc
Confidence 999999999999865322 12345677899999775433 5789999999999999999 99998543
No 234
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=4.3e-34 Score=305.93 Aligned_cols=196 Identities=17% Similarity=0.279 Sum_probs=159.4
Q ss_pred CCCCccceeecCCcceEEEEEEc-CCcEEEEEEeeccccC-HHHHHHHHHHHhhcCCCCcccceeEEEe-----------
Q 004248 534 GDFSDANLIKNGHSGDLFRGILE-GGIPVVIKRIDLQSVK-TEAYLLELDFFSKVSHARLVPLLGHCME----------- 600 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~-~~~~~~E~~~l~~l~H~niv~l~~~~~~----------- 600 (766)
++|...+.||+|+||.||+|... +|+.||||++...... .+++.+|++++++++||||+++++++..
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 90 (320)
T 2i6l_A 11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGS 90 (320)
T ss_dssp TTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----
T ss_pred CceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccccc
Confidence 57888999999999999999964 5899999999755433 5679999999999999999999997632
Q ss_pred --cCCcEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeC-CCC
Q 004248 601 --RENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLD-DKF 677 (766)
Q Consensus 601 --~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~-~~~ 677 (766)
..+..|+||||++ |+|.+++.+. .+++..+..++.|++.||+|||+. +|+||||||+||+++ +++
T Consensus 91 ~~~~~~~~lv~e~~~-~~L~~~~~~~--------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~ 158 (320)
T 2i6l_A 91 LTELNSVYIVQEYME-TDLANVLEQG--------PLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDL 158 (320)
T ss_dssp CCSCSEEEEEEECCS-EEHHHHHTTC--------CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTT
T ss_pred ccccCceeEEeeccC-CCHHHHhhcC--------CccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCC
Confidence 2356899999998 6999998642 388999999999999999999998 999999999999997 567
Q ss_pred cEEeccchhhhhcCC------CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 678 EVRLGSLSEVCAQGG------DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 678 ~~kl~DFG~a~~~~~------~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
.+||+|||+++.... ......+|..|+|||....... ++.++|||||||++|||+||+.||...
T Consensus 159 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~--------~~~~~Di~slG~il~el~~g~~pf~~~ 228 (320)
T 2i6l_A 159 VLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNN--------YTKAIDMWAAGCIFAEMLTGKTLFAGA 228 (320)
T ss_dssp EEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTC--------CCHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred eEEEccCccccccCCCcccccccccccccccccCcHHhcCccc--------CCchhhhHhHHHHHHHHHhCCCCCCCC
Confidence 999999999986532 2233456889999997644221 578999999999999999999999644
No 235
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=7.5e-34 Score=303.70 Aligned_cols=205 Identities=19% Similarity=0.300 Sum_probs=159.5
Q ss_pred HhCCCCccceeecCCcceEEEEEEc----CCcEEEEEEeeccccC---HHHHHHHHHHHhhcCCCCcccceeEEEecCC-
Q 004248 532 ATGDFSDANLIKNGHSGDLFRGILE----GGIPVVIKRIDLQSVK---TEAYLLELDFFSKVSHARLVPLLGHCMEREN- 603 (766)
Q Consensus 532 ~~~~~~~~~~ig~G~~g~Vy~~~~~----~g~~vavK~l~~~~~~---~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~- 603 (766)
..++|...+.||+|+||.||+|... +++.||||++...... .+++.+|++++++++||||+++++++.....
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 111 (313)
T 3brb_A 32 DRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQ 111 (313)
T ss_dssp CGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC----
T ss_pred CHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeecccc
Confidence 3456888899999999999999843 3568999999754332 4579999999999999999999998875332
Q ss_pred ---cEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEE
Q 004248 604 ---EKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVR 680 (766)
Q Consensus 604 ---~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~k 680 (766)
..++||||+++|+|.+++...... .....+++.++..++.|+++||+|||+. +|+||||||+||+++.++.+|
T Consensus 112 ~~~~~~~v~e~~~~~~L~~~l~~~~~~-~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~k 187 (313)
T 3brb_A 112 GIPKPMVILPFMKYGDLHTYLLYSRLE-TGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMTVC 187 (313)
T ss_dssp ---CEEEEEECCTTCBHHHHHHHTTBT-TSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTTSCEE
T ss_pred CCcccEEEEecccCCCHHHHHHHhhhh-cCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEE
Confidence 359999999999999998543210 1224599999999999999999999998 999999999999999999999
Q ss_pred eccchhhhhcCCC-----CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCCC
Q 004248 681 LGSLSEVCAQGGD-----AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLSS 749 (766)
Q Consensus 681 l~DFG~a~~~~~~-----~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~~ 749 (766)
|+|||+++..... .....++..|+|||...... ++.++|||||||++|||+| |+.||...
T Consensus 188 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~Di~slG~il~el~~~g~~p~~~~ 253 (313)
T 3brb_A 188 VADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRV---------YTSKSDVWAFGVTMWEIATRGMTPYPGV 253 (313)
T ss_dssp ECSCSCC----------------CCGGGSCHHHHHSSC---------CCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred EeecCcceecccccccCcccccCCCccccCchhhcCCC---------ccchhhhHHHHHHHHHHHhcCCCCCccC
Confidence 9999999765321 22334577899999875543 4789999999999999999 88888543
No 236
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=9.2e-34 Score=306.74 Aligned_cols=201 Identities=18% Similarity=0.280 Sum_probs=167.1
Q ss_pred HhCCCCccceeecCCcceEEEEEEcCCcEEEEEEeeccccCHHHHHHHHHHHhh--cCCCCcccceeEEEecC---CcEE
Q 004248 532 ATGDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSK--VSHARLVPLLGHCMERE---NEKF 606 (766)
Q Consensus 532 ~~~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~E~~~l~~--l~H~niv~l~~~~~~~~---~~~~ 606 (766)
..++|...+.||+|+||.||+|+. +|+.||||++... ..+.+.+|++++.. ++||||+++++++.... ...+
T Consensus 40 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~--~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~ 116 (342)
T 1b6c_B 40 IARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR--EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW 116 (342)
T ss_dssp HHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG--GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEE
T ss_pred ccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch--hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeE
Confidence 345799999999999999999987 4889999998643 34678889999988 79999999999887643 2689
Q ss_pred EEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhc--------cCCCCCeEecCCCCCCeeeCCCCc
Q 004248 607 LVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLH--------HECTLPFVHRDVQASSILLDDKFE 678 (766)
Q Consensus 607 lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH--------~~~~~~iiHrDlKp~NILl~~~~~ 678 (766)
+||||+++|+|.+++.+. .+++.++..++.|++.||+||| +. +|+||||||+||+++.+++
T Consensus 117 lv~e~~~~g~L~~~l~~~--------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~NIll~~~~~ 185 (342)
T 1b6c_B 117 LVSDYHEHGSLFDYLNRY--------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGT 185 (342)
T ss_dssp EEECCCTTCBHHHHHHHC--------CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGGGEEECTTSC
T ss_pred EEEeecCCCcHHHHHhcc--------CccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHHHEEECCCCC
Confidence 999999999999999753 3899999999999999999999 55 9999999999999999999
Q ss_pred EEeccchhhhhcCCC-------CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcC---------
Q 004248 679 VRLGSLSEVCAQGGD-------AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFN--------- 742 (766)
Q Consensus 679 ~kl~DFG~a~~~~~~-------~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG--------- 742 (766)
+||+|||+++..... .....+|..|+|||......... ...++.++|||||||++|||+||
T Consensus 186 ~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~---~~~~~~~~Di~slG~il~el~tg~~~~~~~~~ 262 (342)
T 1b6c_B 186 CCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMK---HFESFKRADIYAMGLVFWEIARRCSIGGIHED 262 (342)
T ss_dssp EEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTT---CHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCC
T ss_pred EEEEECCCceeccccccccccccccCCcCcccCCHhhhccccccc---ccccCCcccHHHHHHHHHHHHhccCcCCcccc
Confidence 999999999765332 23446899999999875442110 00145799999999999999999
Q ss_pred -CCCCCCC
Q 004248 743 -NHLNLSS 749 (766)
Q Consensus 743 -~~p~~~~ 749 (766)
+.||...
T Consensus 263 ~~~p~~~~ 270 (342)
T 1b6c_B 263 YQLPYYDL 270 (342)
T ss_dssp CCCTTTTT
T ss_pred cccCcccc
Confidence 7788544
No 237
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=2e-34 Score=304.27 Aligned_cols=204 Identities=16% Similarity=0.113 Sum_probs=155.2
Q ss_pred hCCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC---HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEE
Q 004248 533 TGDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK---TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLV 608 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~---~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV 608 (766)
.++|+..+.||+|+||.||+|+. .+|+.||||++...... .+.+.+|...++.++||||+++++++.+ ++..++|
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~-~~~~~lv 84 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFR-EGDVWIC 84 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEC-SSSEEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeec-cCCEEEE
Confidence 35788899999999999999995 67999999999654322 2334555566888999999999998875 5689999
Q ss_pred EeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhh
Q 004248 609 YKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVC 688 (766)
Q Consensus 609 ~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~ 688 (766)
|||++ |+|.+++..... ....+++..+..++.|++.||+|||++ .+|+||||||+||+++.++.+||+|||+++
T Consensus 85 ~e~~~-~~l~~~l~~~~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~--~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 158 (290)
T 3fme_A 85 MELMD-TSLDKFYKQVID---KGQTIPEDILGKIAVSIVKALEHLHSK--LSVIHRDVKPSNVLINALGQVKMCDFGISG 158 (290)
T ss_dssp EECCS-EEHHHHHHHHHH---TTCCCCHHHHHHHHHHHHHHHHHHHHH--SCCCCCCCSGGGCEECTTCCEEBCCC----
T ss_pred Eehhc-cchHHHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHhhc--CCeecCCCCHHHEEECCCCCEEEeecCCcc
Confidence 99998 598888764211 113599999999999999999999984 289999999999999999999999999998
Q ss_pred hcCCC--CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 689 AQGGD--AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 689 ~~~~~--~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
..... .....+|+.|+|||.+.....+. .++.++||||+||++|||+||+.||..
T Consensus 159 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~-----~~~~~~Di~slG~il~~l~~g~~p~~~ 215 (290)
T 3fme_A 159 YLVDDVAKDIDAGCKPYMAPERINPELNQK-----GYSVKSDIWSLGITMIELAILRFPYDS 215 (290)
T ss_dssp -----------CCCCCCSCHHHHSCCTTC-------CCHHHHHHHHHHHHHHHHHTSCSSCC
T ss_pred cccccccccccCCCccccChhhcChhhcCc-----CCCcHHHHHHHHHHHHHHHHCCCCccc
Confidence 66332 23346899999999863221111 157899999999999999999999964
No 238
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=3.3e-34 Score=304.12 Aligned_cols=192 Identities=19% Similarity=0.292 Sum_probs=160.3
Q ss_pred hCCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccCHHHHHHHHHHHhhcCCCCcccceeEEEec----------
Q 004248 533 TGDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMER---------- 601 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~---------- 601 (766)
.++|+..+.||+|+||.||+|+. .+|+.||||++.......+.+.+|++++++++||||+++++++.+.
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 84 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAV 84 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC-----
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhccc
Confidence 45688999999999999999995 5799999999976554567899999999999999999999987642
Q ss_pred --CCcEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcE
Q 004248 602 --ENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEV 679 (766)
Q Consensus 602 --~~~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~ 679 (766)
.+..|+||||+++|+|.+++.... ..+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+
T Consensus 85 ~~~~~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~~ 155 (303)
T 1zy4_A 85 KKKSTLFIQMEYCENGTLYDLIHSEN------LNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNV 155 (303)
T ss_dssp -CEEEEEEEEECCCSCBHHHHHHHSC------GGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCE
T ss_pred ccCCceEEEEecCCCCCHHHhhhccc------cccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCCE
Confidence 246899999999999999997543 2478999999999999999999998 99999999999999999999
Q ss_pred EeccchhhhhcCC-----------------CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc
Q 004248 680 RLGSLSEVCAQGG-----------------DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF 741 (766)
Q Consensus 680 kl~DFG~a~~~~~-----------------~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt 741 (766)
||+|||+++.... ......+|..|+|||....... ++.++|||||||++|||++
T Consensus 156 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~--------~~~~~Di~slG~il~~l~~ 226 (303)
T 1zy4_A 156 KIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGH--------YNEKIDMYSLGIIFFEMIY 226 (303)
T ss_dssp EECCCCCCSCTTC-------------------------CTTSCHHHHTSCSC--------CCTHHHHHHHHHHHHHHHS
T ss_pred EEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCC--------CcchhhHHHHHHHHHHHHh
Confidence 9999999876531 1233467899999998754321 5789999999999999998
No 239
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=3.4e-34 Score=303.13 Aligned_cols=195 Identities=16% Similarity=0.244 Sum_probs=162.0
Q ss_pred CCCCccc-eeecCCcceEEEEEE---cCCcEEEEEEeeccccC---HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEE
Q 004248 534 GDFSDAN-LIKNGHSGDLFRGIL---EGGIPVVIKRIDLQSVK---TEAYLLELDFFSKVSHARLVPLLGHCMERENEKF 606 (766)
Q Consensus 534 ~~~~~~~-~ig~G~~g~Vy~~~~---~~g~~vavK~l~~~~~~---~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~ 606 (766)
++|...+ .||+|+||.||+|.. .+++.||||++...... .+++.+|++++++++||||+++++++ . .+..+
T Consensus 16 ~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~-~~~~~ 93 (291)
T 1xbb_A 16 KLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-E-AESWM 93 (291)
T ss_dssp GGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-E-SSSEE
T ss_pred hhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-C-CCCcE
Confidence 4566666 999999999999963 34789999999754322 56799999999999999999999987 3 45789
Q ss_pred EEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchh
Q 004248 607 LVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSE 686 (766)
Q Consensus 607 lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~ 686 (766)
+||||+++|+|.+++...+ .+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 94 lv~e~~~~~~L~~~l~~~~-------~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~ 163 (291)
T 1xbb_A 94 LVMEMAELGPLNKYLQQNR-------HVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGL 163 (291)
T ss_dssp EEEECCTTEEHHHHHHHCT-------TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTT
T ss_pred EEEEeCCCCCHHHHHHhCc-------CCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEccCCc
Confidence 9999999999999997653 389999999999999999999998 999999999999999999999999999
Q ss_pred hhhcCCCC------ccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCCC
Q 004248 687 VCAQGGDA------HQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLSS 749 (766)
Q Consensus 687 a~~~~~~~------~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~~ 749 (766)
++...... ....++..|+|||...... ++.++|||||||++|||+| |+.||...
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~Di~slG~il~~l~~~g~~p~~~~ 224 (291)
T 1xbb_A 164 SKALRADENYYKAQTHGKWPVKWYAPECINYYK---------FSSKSDVWSFGVLMWEAFSYGQKPYRGM 224 (291)
T ss_dssp CEECCTTCSEEEC----CCCGGGCCHHHHHHCE---------EEHHHHHHHHHHHHHHHHTTTCCSSTTC
T ss_pred ceeeccCCCcccccccCCCCceeeChHHhccCC---------CChhhhHHHHHHHHHHHHhcCCCCCCCC
Confidence 97653321 1223467899999875333 4789999999999999999 99999543
No 240
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=4.4e-33 Score=333.33 Aligned_cols=285 Identities=19% Similarity=0.249 Sum_probs=249.1
Q ss_pred hhhhccCCCCCEEecCCCCCCC-----------------CCchhhh-hCCCCCCEEEccCCCCCccCCcccCCCCCCcEE
Q 004248 110 ADALVNLTHLASFNASRFLLPG-----------------SIPDWLG-QQLPTLQALDLRSCSISGVIPFSLGNLTNLTSL 171 (766)
Q Consensus 110 ~~~l~~l~~L~~L~ls~n~l~g-----------------~ip~~~~-~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L 171 (766)
|..+.++++|+.|++++|.+.| .+|+.++ .++++|++|+|++|.+.+.+|..|+++++|++|
T Consensus 441 P~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L 520 (876)
T 4ecn_A 441 SKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSL 520 (876)
T ss_dssp CGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEE
T ss_pred hHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEE
Confidence 4578999999999999999999 4999875 239999999999999999999999999999999
Q ss_pred EeecCc-CCC-CCCccccCCC-------CCCEEEccCCCCCCCCCc--ccCCCCCCCEEeccCCcCCCCCCCCCCCCCCc
Q 004248 172 YLSDNG-LTG-TIPSSLGQLS-------VLSVLDLSRNSLTGNIPT--SFGLLKNLSSLDISSNYLTGSIPPGLGTLSKL 240 (766)
Q Consensus 172 ~Ls~N~-l~~-~~p~~l~~L~-------~L~~L~Ls~N~l~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L 240 (766)
+|++|+ ++| .+|..+++++ +|++|+|++|+++ .+|. .|+++++|+.|+|++|.++ .+| .++++++|
T Consensus 521 ~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L 597 (876)
T 4ecn_A 521 NIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKL 597 (876)
T ss_dssp ECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEE
T ss_pred ECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcc
Confidence 999998 998 8898776665 9999999999999 8998 9999999999999999999 888 89999999
Q ss_pred cEEEccCCCCCCCCccccCCCCC-CCEEEccCCcCCccCCcccCCCCC--CCEEEccCccCccccCCCc--cC--CCCcc
Q 004248 241 QYLNVSNNSLASSIPAQLGDLDS-LVDLDLSMNSLSGSVPSELRGLRS--LQKFVIGNNFLSGNLSVNL--FP--TVSQL 313 (766)
Q Consensus 241 ~~L~Ls~N~l~~~~p~~l~~l~~-L~~L~Ls~N~l~g~~p~~l~~l~~--L~~L~ls~N~l~g~~~~~~--~~--~l~~L 313 (766)
+.|+|++|+++ .+|..+.++++ |++|+|++|+++ .+|..+..++. |+.|++++|.++|.+|.-. .. .+.+|
T Consensus 598 ~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L 675 (876)
T 4ecn_A 598 TDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINA 675 (876)
T ss_dssp SEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCE
T ss_pred eEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCc
Confidence 99999999998 89999999999 999999999999 78988887765 9999999999998765321 11 34589
Q ss_pred cEEEccCCCCCCCCCcccCCCCCCCEEEccCCCCCCCCCcccccCCC-------CCcEEEccCCcCccCCCc-----CCC
Q 004248 314 QIIVLRQNGFTGPPPDVLWSMPQLRLLDISRNNFTGPLPNSRSNVNT-------STVELNISQNMFYGGLTP-----VLG 381 (766)
Q Consensus 314 ~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~-------~l~~L~ls~N~l~g~~~~-----~l~ 381 (766)
+.|+|++|+++..++..+..+++|+.|+|++|+++ .+|...+.... +|+.|+|++|.+. .+|. .++
T Consensus 676 ~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~ 753 (876)
T 4ecn_A 676 STVTLSYNEIQKFPTELFATGSPISTIILSNNLMT-SIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLP 753 (876)
T ss_dssp EEEECCSSCCCSCCHHHHHTTCCCSEEECCSCCCS-CCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCT
T ss_pred CEEEccCCcCCccCHHHHccCCCCCEEECCCCcCC-ccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhccCC
Confidence 99999999999665555668999999999999999 77765544332 8999999999998 6664 467
Q ss_pred CCCEEeccCCcCccccChhhh
Q 004248 382 RFRLVDLSGNYFEGRVPEYVH 402 (766)
Q Consensus 382 ~l~~ldLs~N~l~g~~p~~~~ 402 (766)
+|+.|+|++|++++ +|..+.
T Consensus 754 ~L~~L~Ls~N~L~~-lp~~l~ 773 (876)
T 4ecn_A 754 YLSNMDVSYNCFSS-FPTQPL 773 (876)
T ss_dssp TCCEEECCSSCCSS-CCCGGG
T ss_pred CcCEEEeCCCCCCc-cchhhh
Confidence 89999999999998 787664
No 241
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=2.2e-32 Score=313.52 Aligned_cols=298 Identities=22% Similarity=0.253 Sum_probs=181.8
Q ss_pred CCEEEEEcCCCCcCCCCCCCCccchhhhccCCCCCEEecCCCCCCCCCchhhhhCCCCCCEEEccCCCCCccCCcccCCC
Q 004248 86 GSVVGINISGFRRTRLGSQNPRFAADALVNLTHLASFNASRFLLPGSIPDWLGQQLPTLQALDLRSCSISGVIPFSLGNL 165 (766)
Q Consensus 86 ~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~L~ls~n~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l 165 (766)
.+++.+++++.... .+.+..+.++++|++|++++|.+.+..|..+.. +++|++|||++|.+++ +|.. .+
T Consensus 21 ~~L~~L~Ls~n~i~-------~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~-l~~L~~L~Ls~N~l~~-lp~~--~l 89 (520)
T 2z7x_B 21 QKTTILNISQNYIS-------ELWTSDILSLSKLRILIISHNRIQYLDISVFKF-NQELEYLDLSHNKLVK-ISCH--PT 89 (520)
T ss_dssp TTCSEEECCSSCCC-------CCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTT-CTTCCEEECCSSCCCE-EECC--CC
T ss_pred ccccEEECCCCccc-------ccChhhccccccccEEecCCCccCCcChHHhhc-ccCCCEEecCCCceee-cCcc--cc
Confidence 35566666654321 112345667777777777777776655666644 7777777777777763 4444 67
Q ss_pred CCCcEEEeecCcCCC-CCCccccCCCCCCEEEccCCCCCCCCCcccCCCCCC--CEEeccCCcC--CCCCCCCCCCCC--
Q 004248 166 TNLTSLYLSDNGLTG-TIPSSLGQLSVLSVLDLSRNSLTGNIPTSFGLLKNL--SSLDISSNYL--TGSIPPGLGTLS-- 238 (766)
Q Consensus 166 ~~L~~L~Ls~N~l~~-~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L--~~L~Ls~N~l--~~~~p~~l~~l~-- 238 (766)
++|++|+|++|++++ .+|..++++++|++|+|++|++++ ..+..+++| +.|++++|.+ .+..|..+..+.
T Consensus 90 ~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~ 166 (520)
T 2z7x_B 90 VNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTE 166 (520)
T ss_dssp CCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEE
T ss_pred CCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeecccccccccccccccccccc
Confidence 777777777777765 456777777777777777777765 345556666 7777777777 566666655533
Q ss_pred --------------------------------------------------------------------------------
Q 004248 239 -------------------------------------------------------------------------------- 238 (766)
Q Consensus 239 -------------------------------------------------------------------------------- 238 (766)
T Consensus 167 ~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~ 246 (520)
T 2z7x_B 167 SLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWH 246 (520)
T ss_dssp EEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHT
T ss_pred eEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchhhhccccchhhccccccccCHHHHHHHHHHhhh
Confidence
Q ss_pred -CccEEEccCCCCCCCCcccc-----CCCCCCCEEEccCCcCCccCC-cc-------------------------cCCCC
Q 004248 239 -KLQYLNVSNNSLASSIPAQL-----GDLDSLVDLDLSMNSLSGSVP-SE-------------------------LRGLR 286 (766)
Q Consensus 239 -~L~~L~Ls~N~l~~~~p~~l-----~~l~~L~~L~Ls~N~l~g~~p-~~-------------------------l~~l~ 286 (766)
+|++|++++|+++|.+|..+ +++++|+.+++++|.+ .+| .. +..++
T Consensus 247 ~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~l~ 324 (520)
T 2z7x_B 247 TTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKIS 324 (520)
T ss_dssp SSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCC
T ss_pred CcccEEEeecccccCccccchhhcccccCceeEeccccccce--ecchhhhhcccccCceeEEEcCCCccccccchhhCC
Confidence 45555555555555566555 5555555555555544 222 11 14556
Q ss_pred CCCEEEccCccCccccCCCccCCCCcccEEEccCCCCCC--CCCcccCCCCCCCEEEccCCCCCCCCCcccccCCCCCcE
Q 004248 287 SLQKFVIGNNFLSGNLSVNLFPTVSQLQIIVLRQNGFTG--PPPDVLWSMPQLRLLDISRNNFTGPLPNSRSNVNTSTVE 364 (766)
Q Consensus 287 ~L~~L~ls~N~l~g~~~~~~~~~l~~L~~L~L~~N~l~~--~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~ 364 (766)
+|++|++++|.+++.+|.. +..+++|+.|+|++|++++ .+|..+..+++|++|++++|++++.+|...+...++|+.
T Consensus 325 ~L~~L~Ls~n~l~~~~~~~-~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~ 403 (520)
T 2z7x_B 325 PFLHLDFSNNLLTDTVFEN-CGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLS 403 (520)
T ss_dssp CCCEEECCSSCCCTTTTTT-CCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCE
T ss_pred cccEEEeECCccChhhhhh-hccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCE
Confidence 6666666666666555543 3566666666666666665 344556666666666666666666555544445566666
Q ss_pred EEccCCcCccCCCcCC-CCCCEEeccCCcCccccChhh
Q 004248 365 LNISQNMFYGGLTPVL-GRFRLVDLSGNYFEGRVPEYV 401 (766)
Q Consensus 365 L~ls~N~l~g~~~~~l-~~l~~ldLs~N~l~g~~p~~~ 401 (766)
|++++|.+++.+|..+ .+|+.|||++|+++ .+|..+
T Consensus 404 L~Ls~N~l~~~~~~~l~~~L~~L~Ls~N~l~-~ip~~~ 440 (520)
T 2z7x_B 404 LNMSSNILTDTIFRCLPPRIKVLDLHSNKIK-SIPKQV 440 (520)
T ss_dssp EECCSSCCCGGGGGSCCTTCCEEECCSSCCC-CCCGGG
T ss_pred EECcCCCCCcchhhhhcccCCEEECCCCccc-ccchhh
Confidence 6666666666665554 46666666666666 555544
No 242
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=4e-34 Score=307.90 Aligned_cols=196 Identities=17% Similarity=0.317 Sum_probs=165.7
Q ss_pred CCCCccceeecCCcceEEEEEE-----cCCcEEEEEEeeccccC-HHHHHHHHHHHhhcCCCCcccceeEEEecC-CcEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-----EGGIPVVIKRIDLQSVK-TEAYLLELDFFSKVSHARLVPLLGHCMERE-NEKF 606 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-----~~g~~vavK~l~~~~~~-~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~~~ 606 (766)
++|+..+.||+|+||.||+|+. .+|+.||||++...... .+++.+|++++++++||||+++++++...+ ...+
T Consensus 41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 120 (326)
T 2w1i_A 41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK 120 (326)
T ss_dssp GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCE
T ss_pred HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceE
Confidence 4578889999999999999983 46899999999764332 568999999999999999999999876532 3689
Q ss_pred EEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchh
Q 004248 607 LVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSE 686 (766)
Q Consensus 607 lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~ 686 (766)
+||||+++|+|.+++..... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 121 lv~e~~~~~~L~~~l~~~~~------~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~Dfg~ 191 (326)
T 2w1i_A 121 LIMEYLPYGSLRDYLQKHKE------RIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGL 191 (326)
T ss_dssp EEECCCTTCBHHHHHHHSTT------SSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTT
T ss_pred EEEECCCCCCHHHHHHhccc------CCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEecCcc
Confidence 99999999999999976532 489999999999999999999998 999999999999999999999999999
Q ss_pred hhhcCCCC------ccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCC
Q 004248 687 VCAQGGDA------HQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNL 747 (766)
Q Consensus 687 a~~~~~~~------~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~ 747 (766)
++...... ....++..|+|||...... ++.++|||||||++|||+||+.|+.
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~Di~slG~il~el~tg~~~~~ 249 (326)
T 2w1i_A 192 TKVLPQDKEYYKVKEPGESPIFWYAPESLTESK---------FSVASDVWSFGVVLYELFTYIEKSK 249 (326)
T ss_dssp CEECCSSCSEEECSSCCSCCGGGCCHHHHHHCE---------EEHHHHHHHHHHHHHHHHHTTCGGG
T ss_pred hhhccccccccccccCCCCceeEECchhhcCCC---------CCchhhHHHHHHHHHHHHhcCCCCC
Confidence 98763321 2234567799999875433 4789999999999999999999885
No 243
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=7.2e-34 Score=308.82 Aligned_cols=197 Identities=16% Similarity=0.160 Sum_probs=168.3
Q ss_pred CCCCccceeecCCcceEEEEEEc-CC-cEEEEEEeeccccCHHHHHHHHHHHhhcCCCC------cccceeEEEecCCcE
Q 004248 534 GDFSDANLIKNGHSGDLFRGILE-GG-IPVVIKRIDLQSVKTEAYLLELDFFSKVSHAR------LVPLLGHCMERENEK 605 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~~-~g-~~vavK~l~~~~~~~~~~~~E~~~l~~l~H~n------iv~l~~~~~~~~~~~ 605 (766)
++|+..+.||+|+||.||+|... ++ +.||||+++......+.+.+|++++++++|++ ++.+++++.. .+..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~-~~~~ 97 (355)
T 2eu9_A 19 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNF-HGHM 97 (355)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEE-TTEE
T ss_pred ccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeee-CCeE
Confidence 67899999999999999999953 44 78999999765445678899999999998766 8888887665 5689
Q ss_pred EEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeee------------
Q 004248 606 FLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILL------------ 673 (766)
Q Consensus 606 ~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl------------ 673 (766)
++||||+ +|+|.+++..... ..+++.++..++.||+.||+|||+. +|+||||||+|||+
T Consensus 98 ~lv~e~~-~~~l~~~l~~~~~-----~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~ 168 (355)
T 2eu9_A 98 CIAFELL-GKNTFEFLKENNF-----QPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEH 168 (355)
T ss_dssp EEEEECC-CCBHHHHHHHTTT-----CCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEEEECCC
T ss_pred EEEEecc-CCChHHHHHhccC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeccccccccccc
Confidence 9999999 5688887765432 3489999999999999999999998 99999999999999
Q ss_pred -------CCCCcEEeccchhhhhcCCCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCC
Q 004248 674 -------DDKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLN 746 (766)
Q Consensus 674 -------~~~~~~kl~DFG~a~~~~~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~ 746 (766)
+.++.+||+|||+++..........+|+.|+|||.+.... ++.++|||||||++|||+||+.||
T Consensus 169 ~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~---------~~~~~Di~slG~il~el~~g~~pf 239 (355)
T 2eu9_A 169 KSCEEKSVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELG---------WAQPCDVWSIGCILFEYYRGFTLF 239 (355)
T ss_dssp -CCCEEEESCCCEEECCCTTCEETTSCCCSSCSCGGGCCHHHHTTCC---------CCTHHHHHHHHHHHHHHHHSSCSC
T ss_pred ccccccccCCCcEEEeecCccccccccccCCcCCCcccCCeeeecCC---------CCCccchHHHHHHHHHHHhCCCCC
Confidence 5678999999999987766666678999999999876543 478999999999999999999999
Q ss_pred CCC
Q 004248 747 LSS 749 (766)
Q Consensus 747 ~~~ 749 (766)
...
T Consensus 240 ~~~ 242 (355)
T 2eu9_A 240 QTH 242 (355)
T ss_dssp CCS
T ss_pred CCC
Confidence 643
No 244
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=5.5e-34 Score=306.34 Aligned_cols=200 Identities=22% Similarity=0.288 Sum_probs=167.7
Q ss_pred HhCCCCccceeecCCcceEEEEEE--cCCcEEEEEEeeccccC---HHHHHHHHHHHhhc---CCCCcccceeEEEe---
Q 004248 532 ATGDFSDANLIKNGHSGDLFRGIL--EGGIPVVIKRIDLQSVK---TEAYLLELDFFSKV---SHARLVPLLGHCME--- 600 (766)
Q Consensus 532 ~~~~~~~~~~ig~G~~g~Vy~~~~--~~g~~vavK~l~~~~~~---~~~~~~E~~~l~~l---~H~niv~l~~~~~~--- 600 (766)
+.++|+..+.||+|+||.||+|.. .+|+.||||++...... ...+.+|+++++++ +||||+++++++..
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 457799999999999999999996 46889999999654322 34677888888776 89999999998762
Q ss_pred -cCCcEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcE
Q 004248 601 -RENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEV 679 (766)
Q Consensus 601 -~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~ 679 (766)
.....++||||++ |+|.+++..... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~l~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~ 159 (326)
T 1blx_A 89 DRETKLTLVFEHVD-QDLTTYLDKVPE-----PGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQI 159 (326)
T ss_dssp SSEEEEEEEEECCS-CBHHHHHHHSCT-----TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCE
T ss_pred CCCceEEEEEecCC-CCHHHHHHhccc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCE
Confidence 2346899999998 699999976532 2489999999999999999999998 99999999999999999999
Q ss_pred EeccchhhhhcCC--CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 680 RLGSLSEVCAQGG--DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 680 kl~DFG~a~~~~~--~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
||+|||+++.... ......+|..|+|||...... ++.++|||||||++|||+||+.||...
T Consensus 160 kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~Di~slG~il~~l~~g~~pf~~~ 222 (326)
T 1blx_A 160 KLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSS---------YATPVDLWSVGCIFAEMFRRKPLFRGS 222 (326)
T ss_dssp EECSCCSCCCCCGGGGGCCCCCCCTTCCHHHHTTCC---------CCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred EEecCcccccccCCCCccccccccceeCHHHHhcCC---------CCcchhHHHHHHHHHHHHcCCCCCCCC
Confidence 9999999976532 223456789999999876543 478999999999999999999999543
No 245
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=5.5e-33 Score=320.58 Aligned_cols=164 Identities=20% Similarity=0.217 Sum_probs=119.6
Q ss_pred CCccceeecC-------------CCEEEEEcCCCCcCCCCCCCCccchhhhccCCCCCEEecCCCCCCCCCchhhhhCCC
Q 004248 76 LVWNGVRCQN-------------GSVVGINISGFRRTRLGSQNPRFAADALVNLTHLASFNASRFLLPGSIPDWLGQQLP 142 (766)
Q Consensus 76 ~~W~gv~C~~-------------~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~L~ls~n~l~g~ip~~~~~~l~ 142 (766)
|.|.|| |+. .+++.+++++..... ..+..+.++++|++|++++|.+.+..|..+.. ++
T Consensus 4 C~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~-------~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~-l~ 74 (549)
T 2z81_A 4 CDASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITY-------IGHGDLRACANLQVLILKSSRINTIEGDAFYS-LG 74 (549)
T ss_dssp ECTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCE-------ECSSTTSSCTTCCEEECTTSCCCEECTTTTTT-CT
T ss_pred CCCCce-EECCCCccccccccCCCCccEEECcCCccCc-------cChhhhhcCCcccEEECCCCCcCccChhhccc-cc
Confidence 379998 862 146777777654321 11235778888888888888887766666654 88
Q ss_pred CCCEEEccCCCCCccCCcccCCCCCCcEEEeecCcCCC-CCCccccCCCCCCEEEccCCCCCCCCC-cccCCCCCCCEEe
Q 004248 143 TLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTG-TIPSSLGQLSVLSVLDLSRNSLTGNIP-TSFGLLKNLSSLD 220 (766)
Q Consensus 143 ~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~-~~p~~l~~L~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~ 220 (766)
+|++|||++|.+++..|..|+++++|++|+|++|.+++ ..|..++++++|++|++++|++.+.+| ..|.++++|++|+
T Consensus 75 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~ 154 (549)
T 2z81_A 75 SLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELE 154 (549)
T ss_dssp TCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEE
T ss_pred cCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeee
Confidence 88888888888888777778888888888888888876 356778888888888888888544554 5788888888888
Q ss_pred ccCCcCCCCCCCCCCCCCCccEEEccCC
Q 004248 221 ISSNYLTGSIPPGLGTLSKLQYLNVSNN 248 (766)
Q Consensus 221 Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N 248 (766)
+++|.+++..|..++++++|++|++++|
T Consensus 155 L~~n~l~~~~~~~l~~l~~L~~L~l~~n 182 (549)
T 2z81_A 155 IKALSLRNYQSQSLKSIRDIHHLTLHLS 182 (549)
T ss_dssp EEETTCCEECTTTTTTCSEEEEEEEECS
T ss_pred ccCCcccccChhhhhccccCceEecccC
Confidence 8888888877777766544444433333
No 246
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.3e-32 Score=311.94 Aligned_cols=312 Identities=18% Similarity=0.155 Sum_probs=274.5
Q ss_pred CccceeecCC-----------CEEEEEcCCCCcCCCCCCCCccchhhhccCCCCCEEecCCCCCCCCCchhhhhCCCCCC
Q 004248 77 VWNGVRCQNG-----------SVVGINISGFRRTRLGSQNPRFAADALVNLTHLASFNASRFLLPGSIPDWLGQQLPTLQ 145 (766)
Q Consensus 77 ~W~gv~C~~~-----------~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~L~ls~n~l~g~ip~~~~~~l~~L~ 145 (766)
.|..|.|... .+..++|++.... .+.+..+.++++|+.|++++|.+.+..|..+.. +++|+
T Consensus 12 ~~~~v~c~~~~l~~ip~~~~~~l~~L~L~~n~l~-------~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~-l~~L~ 83 (477)
T 2id5_A 12 QDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIK-------TLNQDEFASFPHLEELELNENIVSAVEPGAFNN-LFNLR 83 (477)
T ss_dssp TTTEEECCSCCCSSCCSCCCTTCSEEECCSSCCC-------EECTTTTTTCTTCCEEECTTSCCCEECTTTTTT-CTTCC
T ss_pred CCCEEEeCCCCcCcCCCCCCCCCcEEECCCCccc-------eECHhHccCCCCCCEEECCCCccCEeChhhhhC-CccCC
Confidence 5788888632 3566777664432 122357889999999999999998877877765 99999
Q ss_pred EEEccCCCCCccCCcccCCCCCCcEEEeecCcCCCCCCccccCCCCCCEEEccCCCCCCCCCcccCCCCCCCEEeccCCc
Q 004248 146 ALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPSSLGQLSVLSVLDLSRNSLTGNIPTSFGLLKNLSSLDISSNY 225 (766)
Q Consensus 146 ~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 225 (766)
+|+|++|.+++..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|.+++..|..|.++++|+.|+|++|.
T Consensus 84 ~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 163 (477)
T 2id5_A 84 TLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCN 163 (477)
T ss_dssp EEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCC
T ss_pred EEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCc
Confidence 99999999998877889999999999999999999889999999999999999999999889999999999999999999
Q ss_pred CCCCCCCCCCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccCCCCCCCEEEccCccCccccCCC
Q 004248 226 LTGSIPPGLGTLSKLQYLNVSNNSLASSIPAQLGDLDSLVDLDLSMNSLSGSVPSELRGLRSLQKFVIGNNFLSGNLSVN 305 (766)
Q Consensus 226 l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~~~~~ 305 (766)
+++..+..+.++++|+.|+|++|.+.+..+..+.++++|++|++++|.+.+.+|.......+|+.|++++|.++ .+|..
T Consensus 164 l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~-~~~~~ 242 (477)
T 2id5_A 164 LTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLT-AVPYL 242 (477)
T ss_dssp CSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCC-SCCHH
T ss_pred CcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCccc-ccCHH
Confidence 99776677999999999999999999988889999999999999999999988888877889999999999998 46666
Q ss_pred ccCCCCcccEEEccCCCCCCCCCcccCCCCCCCEEEccCCCCCCCCCcccccCCCCCcEEEccCCcCccCCCc---CCCC
Q 004248 306 LFPTVSQLQIIVLRQNGFTGPPPDVLWSMPQLRLLDISRNNFTGPLPNSRSNVNTSTVELNISQNMFYGGLTP---VLGR 382 (766)
Q Consensus 306 ~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~L~ls~N~l~g~~~~---~l~~ 382 (766)
.|..+++|+.|+|++|.+++..+..|..+++|+.|+|++|++++..|. .+..+.+|+.|++++|.+++..+. .+++
T Consensus 243 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 321 (477)
T 2id5_A 243 AVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPY-AFRGLNYLRVLNVSGNQLTTLEESVFHSVGN 321 (477)
T ss_dssp HHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTT-TBTTCTTCCEEECCSSCCSCCCGGGBSCGGG
T ss_pred HhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHH-HhcCcccCCEEECCCCcCceeCHhHcCCCcc
Confidence 678999999999999999999999999999999999999999987775 446678999999999999875543 4578
Q ss_pred CCEEeccCCcCccccC
Q 004248 383 FRLVDLSGNYFEGRVP 398 (766)
Q Consensus 383 l~~ldLs~N~l~g~~p 398 (766)
|+.|+|++|++++..+
T Consensus 322 L~~L~l~~N~l~c~c~ 337 (477)
T 2id5_A 322 LETLILDSNPLACDCR 337 (477)
T ss_dssp CCEEECCSSCEECSGG
T ss_pred cCEEEccCCCccCccc
Confidence 9999999999987654
No 247
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=4.2e-32 Score=314.29 Aligned_cols=277 Identities=21% Similarity=0.219 Sum_probs=178.9
Q ss_pred CCCCEEecCCCCCCCCCchhhhhCCCCCCEEEccCCCCCccCCcccCCCCCCcEEEeecCcCCCCCCccccCCCCCCEEE
Q 004248 117 THLASFNASRFLLPGSIPDWLGQQLPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPSSLGQLSVLSVLD 196 (766)
Q Consensus 117 ~~L~~L~ls~n~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~ 196 (766)
++|+.|++++|.+.+-.|..+.. +++|++|+|++|.+++..|..|+++++|++|+|++|+++ .+|.. .+++|++|+
T Consensus 52 ~~L~~L~Ls~N~i~~~~~~~~~~-l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~ 127 (562)
T 3a79_B 52 PRTKALSLSQNSISELRMPDISF-LSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMASLRHLD 127 (562)
T ss_dssp TTCCEEECCSSCCCCCCGGGTTT-CTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CCTTCSEEE
T ss_pred CCcCEEECCCCCccccChhhhcc-CCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--ccccCCEEE
Confidence 56666777776666544445543 667777777777776666666666777777777777766 45554 566677777
Q ss_pred ccCCCCCC-CCCcccCCCCCCCEEeccCCcCCCCCCCCCCCCCCc--cEEEccCCCC--CCCCccccCCCC---------
Q 004248 197 LSRNSLTG-NIPTSFGLLKNLSSLDISSNYLTGSIPPGLGTLSKL--QYLNVSNNSL--ASSIPAQLGDLD--------- 262 (766)
Q Consensus 197 Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L--~~L~Ls~N~l--~~~~p~~l~~l~--------- 262 (766)
|++|++++ .+|..|+++++|++|+|++|.+++. .+..+++| ++|++++|.+ ++..|..+..+.
T Consensus 128 Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l~l~l~ 204 (562)
T 3a79_B 128 LSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVLHLVFH 204 (562)
T ss_dssp CCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECCEEEEEEEEC
T ss_pred CCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeecccccccccCcccccccCcceEEEEec
Confidence 77776665 3356666677777777777666542 23334444 6666666666 555554444322
Q ss_pred ------------------------------------------------------------------------CCCEEEcc
Q 004248 263 ------------------------------------------------------------------------SLVDLDLS 270 (766)
Q Consensus 263 ------------------------------------------------------------------------~L~~L~Ls 270 (766)
+|++|+++
T Consensus 205 ~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~~~~~L~~L~l~ 284 (562)
T 3a79_B 205 PNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNIY 284 (562)
T ss_dssp SSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHHTTSSEEEEEEE
T ss_pred CccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcCcHHHHHHHHHhhhcccccEEEEe
Confidence 45556666
Q ss_pred CCcCCccCCccc-----------------------------------------------------CCCCCCCEEEccCcc
Q 004248 271 MNSLSGSVPSEL-----------------------------------------------------RGLRSLQKFVIGNNF 297 (766)
Q Consensus 271 ~N~l~g~~p~~l-----------------------------------------------------~~l~~L~~L~ls~N~ 297 (766)
+|+++|.+|..+ ..+++|++|++++|.
T Consensus 285 ~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~l~~L~~L~l~~n~ 364 (562)
T 3a79_B 285 NLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMVCPPSPSSFTFLNFTQNV 364 (562)
T ss_dssp EEEECSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCEEECCSSC
T ss_pred ccEeeccccchhhhcccccchheehhhcccceeecChhhhhhhhccCcceEEEccCCCcccccCccCCCCceEEECCCCc
Confidence 666666555544 566777777777777
Q ss_pred CccccCCCccCCCCcccEEEccCCCCCCCC--CcccCCCCCCCEEEccCCCCCCCCCcccccCCCCCcEEEccCCcCccC
Q 004248 298 LSGNLSVNLFPTVSQLQIIVLRQNGFTGPP--PDVLWSMPQLRLLDISRNNFTGPLPNSRSNVNTSTVELNISQNMFYGG 375 (766)
Q Consensus 298 l~g~~~~~~~~~l~~L~~L~L~~N~l~~~~--p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~L~ls~N~l~g~ 375 (766)
+++.+|.. +..+++|+.|+|++|++++.. |..+..+++|+.|++++|++++.+|...+....+|+.|++++|.+++.
T Consensus 365 l~~~~~~~-~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~ 443 (562)
T 3a79_B 365 FTDSVFQG-CSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGS 443 (562)
T ss_dssp CCTTTTTT-CCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGG
T ss_pred cccchhhh-hcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcc
Confidence 77655543 366777777777777777643 456777777777777777777666665555667777777777777777
Q ss_pred CCcCC-CCCCEEeccCCcCccccChhhh
Q 004248 376 LTPVL-GRFRLVDLSGNYFEGRVPEYVH 402 (766)
Q Consensus 376 ~~~~l-~~l~~ldLs~N~l~g~~p~~~~ 402 (766)
+|..+ .+|+.|||++|+++ .+|..+.
T Consensus 444 ~~~~l~~~L~~L~L~~N~l~-~ip~~~~ 470 (562)
T 3a79_B 444 VFRCLPPKVKVLDLHNNRIM-SIPKDVT 470 (562)
T ss_dssp GGSSCCTTCSEEECCSSCCC-CCCTTTT
T ss_pred hhhhhcCcCCEEECCCCcCc-ccChhhc
Confidence 66666 47777777777776 5665543
No 248
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=3.3e-32 Score=312.01 Aligned_cols=293 Identities=20% Similarity=0.186 Sum_probs=234.7
Q ss_pred CCEEEEEcCCCCcCCCCCCCCccchhhhccCCCCCEEecCCCCCCCCCchhhhhCCCCCCEEEccCCCCCc-cCCcccCC
Q 004248 86 GSVVGINISGFRRTRLGSQNPRFAADALVNLTHLASFNASRFLLPGSIPDWLGQQLPTLQALDLRSCSISG-VIPFSLGN 164 (766)
Q Consensus 86 ~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~L~ls~n~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g-~~p~~l~~ 164 (766)
.+...+++++.... .+.+..+.++++|++|++++|.+. .+|.. .+++|++|+|++|.+++ .+|..|++
T Consensus 45 ~~L~~L~Ls~n~l~-------~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~---~l~~L~~L~L~~N~l~~~~~p~~~~~ 113 (520)
T 2z7x_B 45 SKLRILIISHNRIQ-------YLDISVFKFNQELEYLDLSHNKLV-KISCH---PTVNLKHLDLSFNAFDALPICKEFGN 113 (520)
T ss_dssp TTCCEEECCSSCCC-------EEEGGGGTTCTTCCEEECCSSCCC-EEECC---CCCCCSEEECCSSCCSSCCCCGGGGG
T ss_pred ccccEEecCCCccC-------CcChHHhhcccCCCEEecCCCcee-ecCcc---ccCCccEEeccCCccccccchhhhcc
Confidence 46778888875432 223457899999999999999997 68876 49999999999999998 58899999
Q ss_pred CCCCcEEEeecCcCCCCCCccccCCCCC--CEEEccCCCC--CCCCCcccCCCC--------------------------
Q 004248 165 LTNLTSLYLSDNGLTGTIPSSLGQLSVL--SVLDLSRNSL--TGNIPTSFGLLK-------------------------- 214 (766)
Q Consensus 165 l~~L~~L~Ls~N~l~~~~p~~l~~L~~L--~~L~Ls~N~l--~~~~p~~~~~l~-------------------------- 214 (766)
+++|++|+|++|.+++ ..+..+++| ++|++++|.+ .+..|..+..++
T Consensus 114 l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~ 190 (520)
T 2z7x_B 114 MSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVA 190 (520)
T ss_dssp CTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCS
T ss_pred CCcceEEEecCcccch---hhccccccceeeEEEeecccccccccccccccccccceEEEEeccCcchhhhhhhhhhccc
Confidence 9999999999999986 456777777 9999999998 777777776643
Q ss_pred ---------------------------------------------------------CCCEEeccCCcCCCCCCCCC---
Q 004248 215 ---------------------------------------------------------NLSSLDISSNYLTGSIPPGL--- 234 (766)
Q Consensus 215 ---------------------------------------------------------~L~~L~Ls~N~l~~~~p~~l--- 234 (766)
+|++|++++|.++|.+|..+
T Consensus 191 ~L~~L~l~~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~ 270 (520)
T 2z7x_B 191 NLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDY 270 (520)
T ss_dssp EEEECCEEECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCC
T ss_pred ceeeccccccccccccceeecchhhhccccchhhccccccccCHHHHHHHHHHhhhCcccEEEeecccccCccccchhhc
Confidence 78888888888888999888
Q ss_pred --CCCCCccEEEccCCCCCCCCcc-c-------------------------cCCCCCCCEEEccCCcCCccCCcccCCCC
Q 004248 235 --GTLSKLQYLNVSNNSLASSIPA-Q-------------------------LGDLDSLVDLDLSMNSLSGSVPSELRGLR 286 (766)
Q Consensus 235 --~~l~~L~~L~Ls~N~l~~~~p~-~-------------------------l~~l~~L~~L~Ls~N~l~g~~p~~l~~l~ 286 (766)
+++++|+.+++++|.+ .+|. . +..+++|++|++++|++++.+|..+++++
T Consensus 271 ~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~ 348 (520)
T 2z7x_B 271 SGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKISPFLHLDFSNNLLTDTVFENCGHLT 348 (520)
T ss_dssp CSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCEEECCSSCCCTTTTTTCCCCS
T ss_pred ccccCceeEeccccccce--ecchhhhhcccccCceeEEEcCCCccccccchhhCCcccEEEeECCccChhhhhhhccCC
Confidence 7787777777777776 3341 1 15778899999999999888888888899
Q ss_pred CCCEEEccCccCcc--ccCCCccCCCCcccEEEccCCCCCCCCCc-ccCCCCCCCEEEccCCCCCCCCCcccccCCCCCc
Q 004248 287 SLQKFVIGNNFLSG--NLSVNLFPTVSQLQIIVLRQNGFTGPPPD-VLWSMPQLRLLDISRNNFTGPLPNSRSNVNTSTV 363 (766)
Q Consensus 287 ~L~~L~ls~N~l~g--~~~~~~~~~l~~L~~L~L~~N~l~~~~p~-~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~ 363 (766)
+|++|++++|.+++ .+|. .+..+++|+.|++++|++++.+|. .+..+++|+.|++++|++++.+|... ..+|+
T Consensus 349 ~L~~L~L~~N~l~~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l---~~~L~ 424 (520)
T 2z7x_B 349 ELETLILQMNQLKELSKIAE-MTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCL---PPRIK 424 (520)
T ss_dssp SCCEEECCSSCCCBHHHHHH-HHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSC---CTTCC
T ss_pred CCCEEEccCCccCccccchH-HHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhh---cccCC
Confidence 99999999998875 3333 347788899999999999885554 47888899999999999887777543 26788
Q ss_pred EEEccCCcCccCCCc---CCCCCCEEeccCCcCccccChh
Q 004248 364 ELNISQNMFYGGLTP---VLGRFRLVDLSGNYFEGRVPEY 400 (766)
Q Consensus 364 ~L~ls~N~l~g~~~~---~l~~l~~ldLs~N~l~g~~p~~ 400 (766)
.|++++|.++ .+|. .+++|+.|||++|+++ .+|..
T Consensus 425 ~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~ 462 (520)
T 2z7x_B 425 VLDLHSNKIK-SIPKQVVKLEALQELNVASNQLK-SVPDG 462 (520)
T ss_dssp EEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC-CCCTT
T ss_pred EEECCCCccc-ccchhhhcCCCCCEEECCCCcCC-ccCHH
Confidence 8999999887 6664 4678889999999888 46655
No 249
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=1.4e-33 Score=318.61 Aligned_cols=197 Identities=14% Similarity=0.114 Sum_probs=166.1
Q ss_pred hCCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccCHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEEee
Q 004248 533 TGDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKY 611 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~Ey 611 (766)
.++|+..++||+|+||.||+|+. .+++.||||++..... .+++.+|+++++.++|++.+..+.++....+..++||||
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~ 84 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDL 84 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS-SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc-cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEEC
Confidence 36789999999999999999995 6799999998865433 345889999999999866666565555556788999999
Q ss_pred CCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeee---CCCCcEEeccchhhh
Q 004248 612 MPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILL---DDKFEVRLGSLSEVC 688 (766)
Q Consensus 612 ~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl---~~~~~~kl~DFG~a~ 688 (766)
+ +|+|.+++.... ..++|.+++.|+.||+.||+|||+. +||||||||+|||+ +.++.+||+|||+++
T Consensus 85 ~-g~sL~~ll~~~~------~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~ 154 (483)
T 3sv0_A 85 L-GPSLEDLFNFCS------RKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 154 (483)
T ss_dssp C-CCBHHHHHHHTT------TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCCTTCE
T ss_pred C-CCCHHHHHHhhc------CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeCCcce
Confidence 9 899999997533 2499999999999999999999998 99999999999999 688999999999998
Q ss_pred hcCCCC----------ccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 689 AQGGDA----------HQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 689 ~~~~~~----------~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
...... ....+|..|+|||...... ++.++|||||||++|||++|+.||...
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~---------~s~~sDvwSlGvil~elltG~~Pf~~~ 216 (483)
T 3sv0_A 155 KYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIE---------QSRRDDLESLGYVLMYFLRGSLPWQGL 216 (483)
T ss_dssp ECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCC---------CCHHHHHHHHHHHHHHHHHSSCTTSSC
T ss_pred eccCCccccccccccccccCCCccccCHHHhcCCC---------CChHHHHHHHHHHHHHHHhCCCCCccc
Confidence 763321 1457899999999876554 478999999999999999999999653
No 250
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=2.7e-32 Score=318.06 Aligned_cols=266 Identities=22% Similarity=0.173 Sum_probs=134.7
Q ss_pred hccCCCCCEEecCCCCCCCCCchhhhhCCCCCCEEEccCCCCCccCCcccCCCCCCcEEEeecCcCCCCCCccccCCCCC
Q 004248 113 LVNLTHLASFNASRFLLPGSIPDWLGQQLPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPSSLGQLSVL 192 (766)
Q Consensus 113 l~~l~~L~~L~ls~n~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L 192 (766)
+.++++|+.|++++|.+.+..|..+.. +++|++|+|++|.+++..|..|+++++|++|+|++|.+++..+..|.++++|
T Consensus 71 ~~~l~~L~~L~L~~n~l~~~~~~~~~~-l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L 149 (597)
T 3oja_B 71 LDSFRQVELLNLNDLQIEEIDTYAFAY-AHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKL 149 (597)
T ss_dssp HHHCCCCSEEECTTSCCCEECTTTTTT-CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTC
T ss_pred HccCCCCcEEECCCCCCCCCChHHhcC-CCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCC
Confidence 344455555555555544433333332 4555555555555554444444555555555555555543333334455555
Q ss_pred CEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCCCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCC
Q 004248 193 SVLDLSRNSLTGNIPTSFGLLKNLSSLDISSNYLTGSIPPGLGTLSKLQYLNVSNNSLASSIPAQLGDLDSLVDLDLSMN 272 (766)
Q Consensus 193 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N 272 (766)
++|+|++|.+++..|..|+++++|+.|+|++|.+++.. ++.+++|+.|++++|.+++ +...++|+.|++++|
T Consensus 150 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~---~~~l~~L~~L~l~~n~l~~-----l~~~~~L~~L~ls~n 221 (597)
T 3oja_B 150 TTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLST-----LAIPIAVEELDASHN 221 (597)
T ss_dssp CEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC---GGGCTTCSEEECCSSCCSE-----EECCTTCSEEECCSS
T ss_pred CEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC---hhhhhhhhhhhcccCcccc-----ccCCchhheeeccCC
Confidence 55555555555444444555555555555555544321 2233334444444443332 112233444444444
Q ss_pred cCCccCCcccCCCCCCCEEEccCccCccccCCCccCCCCcccEEEccCCCCCCCCCcccCCCCCCCEEEccCCCCCCCCC
Q 004248 273 SLSGSVPSELRGLRSLQKFVIGNNFLSGNLSVNLFPTVSQLQIIVLRQNGFTGPPPDVLWSMPQLRLLDISRNNFTGPLP 352 (766)
Q Consensus 273 ~l~g~~p~~l~~l~~L~~L~ls~N~l~g~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p 352 (766)
.++...+ .+ .++|+.|++++|.+++. ..+..+++|+.|+|++|.+++.+|..|..+++|+.|+|++|++++ +|
T Consensus 222 ~l~~~~~-~~--~~~L~~L~L~~n~l~~~---~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~ 294 (597)
T 3oja_B 222 SINVVRG-PV--NVELTILKLQHNNLTDT---AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LN 294 (597)
T ss_dssp CCCEEEC-SC--CSCCCEEECCSSCCCCC---GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EE
T ss_pred ccccccc-cc--CCCCCEEECCCCCCCCC---hhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CC
Confidence 4442211 11 24566666666666642 234556666666666666666666666666666666666666664 33
Q ss_pred cccccCCCCCcEEEccCCcCccCCCc---CCCCCCEEeccCCcCccc
Q 004248 353 NSRSNVNTSTVELNISQNMFYGGLTP---VLGRFRLVDLSGNYFEGR 396 (766)
Q Consensus 353 ~~~~~~~~~l~~L~ls~N~l~g~~~~---~l~~l~~ldLs~N~l~g~ 396 (766)
.. ...+++|+.|+|++|.+. .+|. .+++|+.|+|++|.+++.
T Consensus 295 ~~-~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~ 339 (597)
T 3oja_B 295 LY-GQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL 339 (597)
T ss_dssp CS-SSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC
T ss_pred cc-cccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCc
Confidence 22 233456666666666665 3443 245666666666666543
No 251
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=5.3e-34 Score=312.48 Aligned_cols=199 Identities=18% Similarity=0.269 Sum_probs=168.7
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccCHHHHHHHHHHHhhcC-----------CCCcccceeEEEec
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVKTEAYLLELDFFSKVS-----------HARLVPLLGHCMER 601 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~-----------H~niv~l~~~~~~~ 601 (766)
++|...+.||+|+||.||+|+. .+++.||||++.......+.+.+|++++++++ ||||+++++++...
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~ 98 (373)
T 1q8y_A 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHK 98 (373)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEE
T ss_pred CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhcc
Confidence 5788999999999999999995 67999999999765555678899999999986 89999999987653
Q ss_pred C---CcEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeC----
Q 004248 602 E---NEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLD---- 674 (766)
Q Consensus 602 ~---~~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~---- 674 (766)
. ...++||||+ +|+|.+++..... ..+++..+..++.||+.||+|||+++ +|+||||||+|||++
T Consensus 99 ~~~~~~~~lv~e~~-~~~L~~~~~~~~~-----~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~~~ 170 (373)
T 1q8y_A 99 GPNGVHVVMVFEVL-GENLLALIKKYEH-----RGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVDS 170 (373)
T ss_dssp ETTEEEEEEEECCC-CEEHHHHHHHTTT-----SCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEEET
T ss_pred CCCCceEEEEEecC-CCCHHHHHHHhhc-----cCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEeccCC
Confidence 2 2689999999 8899999976432 34899999999999999999999842 799999999999994
Q ss_pred --CCCcEEeccchhhhhcCCCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 675 --DKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 675 --~~~~~kl~DFG~a~~~~~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
..+.+||+|||+++..........+|+.|+|||...... ++.++|||||||++|||+||+.||...
T Consensus 171 ~~~~~~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~---------~~~~~Di~slG~il~el~~g~~pf~~~ 238 (373)
T 1q8y_A 171 PENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAP---------WGCGADIWSTACLIFELITGDFLFEPD 238 (373)
T ss_dssp TTTEEEEEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCC---------CCTHHHHHHHHHHHHHHHHSSCCC---
T ss_pred CcCcceEEEcccccccccCCCCCCCCCCccccCcHHHhCCC---------CCchHhHHHHHHHHHHHHhCCCCCCCC
Confidence 445899999999987766666668899999999876544 478999999999999999999999643
No 252
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=1.7e-33 Score=297.20 Aligned_cols=196 Identities=15% Similarity=0.250 Sum_probs=168.5
Q ss_pred hCCCCccceeecCCcceEEEEEEc-CCcEEEEEEeecccc---CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEE
Q 004248 533 TGDFSDANLIKNGHSGDLFRGILE-GGIPVVIKRIDLQSV---KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLV 608 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~---~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV 608 (766)
.++|+..+.||+|+||.||+|+.. +++.||||++..... ..+.+.+|++++++++||||+++++++.. .+..++|
T Consensus 21 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv 99 (287)
T 2wei_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILED-SSSFYIV 99 (287)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-SSEEEEE
T ss_pred hhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeC-CCeEEEE
Confidence 357999999999999999999964 789999999975433 36789999999999999999999998765 5689999
Q ss_pred EeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCC---CcEEeccch
Q 004248 609 YKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDK---FEVRLGSLS 685 (766)
Q Consensus 609 ~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~---~~~kl~DFG 685 (766)
|||+++|+|.+++.... .+++.++..++.|++.||+|||+. +|+||||||+||+++.+ +.+||+|||
T Consensus 100 ~e~~~~~~L~~~l~~~~-------~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg 169 (287)
T 2wei_A 100 GELYTGGELFDEIIKRK-------RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFG 169 (287)
T ss_dssp ECCCCSCBHHHHHHHHS-------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECSTT
T ss_pred EEccCCCCHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEEEeccC
Confidence 99999999999987543 389999999999999999999998 99999999999999764 469999999
Q ss_pred hhhhcCCC--CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 686 EVCAQGGD--AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 686 ~a~~~~~~--~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
+++..... .....+|..|+|||...+. ++.++|||||||++|||+||+.||...
T Consensus 170 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~----------~~~~~Di~slG~~l~~l~~g~~p~~~~ 225 (287)
T 2wei_A 170 LSTCFQQNTKMKDRIGTAYYIAPEVLRGT----------YDEKCDVWSAGVILYILLSGTPPFYGK 225 (287)
T ss_dssp GGGTBCCCSSCSCHHHHHTTCCHHHHTTC----------CCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cceeecCCCccccccCcccccChHHhcCC----------CCCchhhHhHHHHHHHHHhCCCCCCCC
Confidence 99876432 2344678899999976432 478999999999999999999999543
No 253
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=7.1e-32 Score=297.78 Aligned_cols=271 Identities=20% Similarity=0.183 Sum_probs=152.4
Q ss_pred CCCCCEEecCCCCCCCCCchhhhhCCCCCCEEEccCCCCCccCCcccCCCCCCcEEEeecCcCCCCCCccccCCCCCCEE
Q 004248 116 LTHLASFNASRFLLPGSIPDWLGQQLPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPSSLGQLSVLSVL 195 (766)
Q Consensus 116 l~~L~~L~ls~n~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L 195 (766)
+++++.|++++|.+ +.+|+.+...+++|++|+|++|.+++..|..|.++++|++|+|++|++++..|..+.++++|++|
T Consensus 44 l~~l~~l~l~~~~l-~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 122 (390)
T 3o6n_A 44 LNNQKIVTFKNSTM-RKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 122 (390)
T ss_dssp GCCCSEEEEESCEE-SEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred cCCceEEEecCCch-hhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEE
Confidence 44555555555544 23444433335555555555555555555555555555555555555555445555555555555
Q ss_pred EccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCCCCCCCccEEEccCCCCCCCCcccc----------------C
Q 004248 196 DLSRNSLTGNIPTSFGLLKNLSSLDISSNYLTGSIPPGLGTLSKLQYLNVSNNSLASSIPAQL----------------G 259 (766)
Q Consensus 196 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l----------------~ 259 (766)
+|++|+++...+..|.++++|++|+|++|.+++..|..+..+++|++|++++|++++.....+ .
T Consensus 123 ~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~L~~L~l~~n~l~~~~ 202 (390)
T 3o6n_A 123 VLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTLA 202 (390)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCCGGGCTTCSEEECCSSCCSEEE
T ss_pred ECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCccccccccccceeecccccccccC
Confidence 555555553333334555555555555555555444555555555555555555544321111 1
Q ss_pred CCCCCCEEEccCCcCCccCCcccCCCCCCCEEEccCccCccccCCCccCCCCcccEEEccCCCCCCCCCcccCCCCCCCE
Q 004248 260 DLDSLVDLDLSMNSLSGSVPSELRGLRSLQKFVIGNNFLSGNLSVNLFPTVSQLQIIVLRQNGFTGPPPDVLWSMPQLRL 339 (766)
Q Consensus 260 ~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~ 339 (766)
..++|++|++++|.++.. |.. ..++|+.|++++|.+++. ..+..+++|+.|+|++|.+++.+|..+..+++|+.
T Consensus 203 ~~~~L~~L~l~~n~l~~~-~~~--~~~~L~~L~l~~n~l~~~---~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~ 276 (390)
T 3o6n_A 203 IPIAVEELDASHNSINVV-RGP--VNVELTILKLQHNNLTDT---AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLER 276 (390)
T ss_dssp CCSSCSEEECCSSCCCEE-ECC--CCSSCCEEECCSSCCCCC---GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCE
T ss_pred CCCcceEEECCCCeeeec-ccc--ccccccEEECCCCCCccc---HHHcCCCCccEEECCCCcCCCcChhHccccccCCE
Confidence 123445555555555432 221 235677777777777653 23466777777777777777777777777777777
Q ss_pred EEccCCCCCCCCCcccccCCCCCcEEEccCCcCccCCCc---CCCCCCEEeccCCcCccc
Q 004248 340 LDISRNNFTGPLPNSRSNVNTSTVELNISQNMFYGGLTP---VLGRFRLVDLSGNYFEGR 396 (766)
Q Consensus 340 L~Ls~N~l~g~~p~~~~~~~~~l~~L~ls~N~l~g~~~~---~l~~l~~ldLs~N~l~g~ 396 (766)
|+|++|++++ +|.. ....++|+.|++++|.+.+ +|. .+++|+.|+|++|+++..
T Consensus 277 L~L~~n~l~~-~~~~-~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~N~i~~~ 333 (390)
T 3o6n_A 277 LYISNNRLVA-LNLY-GQPIPTLKVLDLSHNHLLH-VERNQPQFDRLENLYLDHNSIVTL 333 (390)
T ss_dssp EECCSSCCCE-EECS-SSCCTTCCEEECCSSCCCC-CGGGHHHHTTCSEEECCSSCCCCC
T ss_pred EECCCCcCcc-cCcc-cCCCCCCCEEECCCCccee-cCccccccCcCCEEECCCCcccee
Confidence 7777777764 3322 2345677777777777763 333 346777777777777643
No 254
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=4.8e-34 Score=306.49 Aligned_cols=198 Identities=17% Similarity=0.204 Sum_probs=168.6
Q ss_pred HhCCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC-------HHHHHHHHHHHhhcC--CCCcccceeEEEec
Q 004248 532 ATGDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK-------TEAYLLELDFFSKVS--HARLVPLLGHCMER 601 (766)
Q Consensus 532 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~-------~~~~~~E~~~l~~l~--H~niv~l~~~~~~~ 601 (766)
..++|+..+.||+|+||.||+|+. .+++.||||++...... .+++.+|++++++++ ||||+++++++..
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~- 119 (320)
T 3a99_A 41 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFER- 119 (320)
T ss_dssp CTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEEC-
T ss_pred ccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEec-
Confidence 346788999999999999999984 67899999999764322 246788999999996 5999999998765
Q ss_pred CCcEEEEEeeCCC-CChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeC-CCCcE
Q 004248 602 ENEKFLVYKYMPN-GDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLD-DKFEV 679 (766)
Q Consensus 602 ~~~~~lV~Ey~~~-GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~-~~~~~ 679 (766)
++..++||||+.+ ++|.+++.+.. .+++..+..++.|++.||+|||+. +|+||||||+|||++ +++.+
T Consensus 120 ~~~~~lv~e~~~~~~~L~~~l~~~~-------~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~ 189 (320)
T 3a99_A 120 PDSFVLILERPEPVQDLFDFITERG-------ALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGEL 189 (320)
T ss_dssp SSEEEEEEECCSSEEEHHHHHHHHC-------SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEE
T ss_pred CCcEEEEEEcCCCCccHHHHHhccC-------CCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCCCCCE
Confidence 5689999999986 89999997653 389999999999999999999998 999999999999999 78999
Q ss_pred EeccchhhhhcCCC-CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 680 RLGSLSEVCAQGGD-AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 680 kl~DFG~a~~~~~~-~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
||+|||+++..... .....+|..|+|||......+ .+.++|||||||++|||+||+.||..
T Consensus 190 kL~Dfg~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~--------~~~~~Di~slG~il~el~~g~~pf~~ 251 (320)
T 3a99_A 190 KLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRY--------HGRSAAVWSLGILLYDMVCGDIPFEH 251 (320)
T ss_dssp EECCCTTCEECCSSCBCCCCSCGGGSCHHHHHHSCB--------CHHHHHHHHHHHHHHHHHHSSCSCCS
T ss_pred EEeeCccccccccccccCCCCCccCCChHHhccCCC--------CCccchHHhHHHHHHHHHHCCCCCCC
Confidence 99999999876432 344568999999998754432 36789999999999999999999953
No 255
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=6.4e-32 Score=315.53 Aligned_cols=305 Identities=18% Similarity=0.136 Sum_probs=228.6
Q ss_pred CEEEEEcCCCCcCCCCCCCCccchhhhccCCCCCEEecCCCCCCCCCchhhhhCCCCCCEEEccCCCCCccCCcccCCCC
Q 004248 87 SVVGINISGFRRTRLGSQNPRFAADALVNLTHLASFNASRFLLPGSIPDWLGQQLPTLQALDLRSCSISGVIPFSLGNLT 166 (766)
Q Consensus 87 ~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~L~ls~n~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~ 166 (766)
.++.+++++.... .+.+..+.++++|++|++++|.+.+..|..+.. +++|++|+|++|.+++..|..|++++
T Consensus 34 ~l~~L~Ls~n~i~-------~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~-l~~L~~L~Ls~n~l~~~~~~~~~~l~ 105 (606)
T 3t6q_A 34 STECLEFSFNVLP-------TIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQS-QHRLDTLVLTANPLIFMAETALSGPK 105 (606)
T ss_dssp TCCEEECTTCCCS-------EECTTTSTTCTTCSEEECTTCCCCEECTTTTTT-CTTCCEEECTTCCCSEECTTTTSSCT
T ss_pred cCcEEEccCCccC-------cCChhHhccCccceEEECCCCccceeChhhccC-ccccCeeeCCCCcccccChhhhcccc
Confidence 4566677664432 122346777888888888888877766766654 88888888888888887788888888
Q ss_pred CCcEEEeecCcCCCCCCccccCCCCCCEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCCCCCCCcc--EEE
Q 004248 167 NLTSLYLSDNGLTGTIPSSLGQLSVLSVLDLSRNSLTGNIPTSFGLLKNLSSLDISSNYLTGSIPPGLGTLSKLQ--YLN 244 (766)
Q Consensus 167 ~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~--~L~ 244 (766)
+|++|+|++|++++..|..+.++++|++|+|++|++++..+..+..+++|+.|+|++|.+++..|..++.+++|+ .|+
T Consensus 106 ~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~ 185 (606)
T 3t6q_A 106 ALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLN 185 (606)
T ss_dssp TCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEE
T ss_pred cccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEe
Confidence 888888888888876677788888888888888888764434444588888888888888776677777777777 778
Q ss_pred ccCCCCCCCCccccCCC---------------------------------------------------CCCCEEEccCCc
Q 004248 245 VSNNSLASSIPAQLGDL---------------------------------------------------DSLVDLDLSMNS 273 (766)
Q Consensus 245 Ls~N~l~~~~p~~l~~l---------------------------------------------------~~L~~L~Ls~N~ 273 (766)
+++|.+++..|..+... .+|+.|++++|.
T Consensus 186 l~~n~l~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~ 265 (606)
T 3t6q_A 186 LNGNDIAGIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHY 265 (606)
T ss_dssp CTTCCCCEECTTTTTTCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCC
T ss_pred cCCCccCccChhHhhhccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCc
Confidence 88888777666544321 056777777777
Q ss_pred CCccCCcccCCCCCCCEEEccCccCccccCCCccCCCCcccEEEccCCCCCCCCCcccCCCCCCCEEEccCCCCCCCCCc
Q 004248 274 LSGSVPSELRGLRSLQKFVIGNNFLSGNLSVNLFPTVSQLQIIVLRQNGFTGPPPDVLWSMPQLRLLDISRNNFTGPLPN 353 (766)
Q Consensus 274 l~g~~p~~l~~l~~L~~L~ls~N~l~g~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~ 353 (766)
+++..+..|+++++|++|++++|.++ .+|.. +..+++|+.|++++|++++.+|..+..+++|++|++++|.+.+.+|.
T Consensus 266 l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~-l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~ 343 (606)
T 3t6q_A 266 FFNISSNTFHCFSGLQELDLTATHLS-ELPSG-LVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGT 343 (606)
T ss_dssp CSSCCTTTTTTCTTCSEEECTTSCCS-CCCSS-CCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCS
T ss_pred cCccCHHHhccccCCCEEeccCCccC-CCChh-hcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccch
Confidence 87777777888888888888888887 56655 36778888888888888888888888888888888888888888877
Q ss_pred ccccCCCCCcEEEccCCcCccCC--C---cCCCCCCEEeccCCcCccccChhh
Q 004248 354 SRSNVNTSTVELNISQNMFYGGL--T---PVLGRFRLVDLSGNYFEGRVPEYV 401 (766)
Q Consensus 354 ~~~~~~~~l~~L~ls~N~l~g~~--~---~~l~~l~~ldLs~N~l~g~~p~~~ 401 (766)
..+..+++|++|++++|.+.+.. + ..+++|+.|++++|.+++..|..+
T Consensus 344 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~ 396 (606)
T 3t6q_A 344 GCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAF 396 (606)
T ss_dssp STTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTT
T ss_pred hhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHh
Confidence 66667788888888888887643 2 346778888888888887777655
No 256
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=6.2e-32 Score=315.66 Aligned_cols=302 Identities=22% Similarity=0.252 Sum_probs=247.2
Q ss_pred CEEEEEcCCCCcCCCCCCCCccchhhhccCCCCCEEecCCCCCCCCCchhhhhCCCCCCEEEccCCCCCccCCcccCCCC
Q 004248 87 SVVGINISGFRRTRLGSQNPRFAADALVNLTHLASFNASRFLLPGSIPDWLGQQLPTLQALDLRSCSISGVIPFSLGNLT 166 (766)
Q Consensus 87 ~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~L~ls~n~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~ 166 (766)
.+..+++++.... . +.+..+.++++|+.|++++|.+. .+|+.+.. +++|++|+|++|.+++..|..+.+++
T Consensus 255 ~L~~L~l~~n~l~---~----~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~-l~~L~~L~l~~n~l~~~~~~~~~~l~ 325 (606)
T 3t6q_A 255 SVESINLQKHYFF---N----ISSNTFHCFSGLQELDLTATHLS-ELPSGLVG-LSTLKKLVLSANKFENLCQISASNFP 325 (606)
T ss_dssp EEEEEECTTCCCS---S----CCTTTTTTCTTCSEEECTTSCCS-CCCSSCCS-CTTCCEEECTTCCCSBGGGGCGGGCT
T ss_pred ceeEEEeecCccC---c----cCHHHhccccCCCEEeccCCccC-CCChhhcc-cccCCEEECccCCcCcCchhhhhccC
Confidence 4677777765432 1 12235778889999999998886 78887754 88999999999999888888889999
Q ss_pred CCcEEEeecCcCCCCCCcc-ccCCCCCCEEEccCCCCCCCC--CcccCCCCCCCEEeccCCcCCCCCCCCCCCCCCccEE
Q 004248 167 NLTSLYLSDNGLTGTIPSS-LGQLSVLSVLDLSRNSLTGNI--PTSFGLLKNLSSLDISSNYLTGSIPPGLGTLSKLQYL 243 (766)
Q Consensus 167 ~L~~L~Ls~N~l~~~~p~~-l~~L~~L~~L~Ls~N~l~~~~--p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L 243 (766)
+|++|+|++|.+.+.+|.. +.++++|++|++++|++++.. |..+..+++|+.|++++|.+++..|..+..+++|++|
T Consensus 326 ~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 405 (606)
T 3t6q_A 326 SLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELL 405 (606)
T ss_dssp TCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEE
T ss_pred cCCEEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeE
Confidence 9999999999888777654 888999999999999988765 7788889999999999999888888888899999999
Q ss_pred EccCCCCCCCCccc-cCCCCCCCEEEccCCcCCccCCcccCCCCCCCEEEccCccCccc-cC-CCccCCCCcccEEEccC
Q 004248 244 NVSNNSLASSIPAQ-LGDLDSLVDLDLSMNSLSGSVPSELRGLRSLQKFVIGNNFLSGN-LS-VNLFPTVSQLQIIVLRQ 320 (766)
Q Consensus 244 ~Ls~N~l~~~~p~~-l~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~-~~-~~~~~~l~~L~~L~L~~ 320 (766)
++++|++++..|.. +.++++|++|++++|.+++..|..+.++++|++|++++|.+++. ++ ...+..+++|+.|++++
T Consensus 406 ~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~ 485 (606)
T 3t6q_A 406 DLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSF 485 (606)
T ss_dssp ECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTT
T ss_pred ECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCC
Confidence 99999988776654 88889999999999999888888888999999999999988763 22 24467888999999999
Q ss_pred CCCCCCCCcccCCCCCCCEEEccCCCCCCCCCcccccCCCCCcEEEccCCcCccCCCcC---CCCCCEEeccCCcCcccc
Q 004248 321 NGFTGPPPDVLWSMPQLRLLDISRNNFTGPLPNSRSNVNTSTVELNISQNMFYGGLTPV---LGRFRLVDLSGNYFEGRV 397 (766)
Q Consensus 321 N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~L~ls~N~l~g~~~~~---l~~l~~ldLs~N~l~g~~ 397 (766)
|++++.+|..|..+++|+.|+|++|++++..|... .....+ .|++++|.+++..|.. +++|+.|++++|++++..
T Consensus 486 n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l-~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c 563 (606)
T 3t6q_A 486 CDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEAL-SHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTC 563 (606)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGG-TTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSG
T ss_pred CccCccChhhhccccCCCEEECCCCccCcCChhHh-Cccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccC
Confidence 99998888889999999999999999988777544 456777 8999999998766643 568889999999998876
Q ss_pred Ch
Q 004248 398 PE 399 (766)
Q Consensus 398 p~ 399 (766)
+.
T Consensus 564 ~~ 565 (606)
T 3t6q_A 564 SN 565 (606)
T ss_dssp GG
T ss_pred Cc
Confidence 63
No 257
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=2.1e-33 Score=302.19 Aligned_cols=205 Identities=17% Similarity=0.187 Sum_probs=148.6
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC--HHHHHHHHH-HHhhcCCCCcccceeEEEecCCcEEEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK--TEAYLLELD-FFSKVSHARLVPLLGHCMERENEKFLVY 609 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~--~~~~~~E~~-~l~~l~H~niv~l~~~~~~~~~~~~lV~ 609 (766)
++|+..+.||+|+||.||+|.. .+|+.||||++...... ..++.+|+. +++.++||||+++++++.. ++..++||
T Consensus 22 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~-~~~~~lv~ 100 (327)
T 3aln_A 22 EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFR-EGDCWICM 100 (327)
T ss_dssp CSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEEC-SSEEEEEE
T ss_pred HHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEe-CCceEEEE
Confidence 6788899999999999999996 57999999999764322 345666666 7778899999999998876 56899999
Q ss_pred eeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhh
Q 004248 610 KYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCA 689 (766)
Q Consensus 610 Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~ 689 (766)
||+++ +|.+++..... .....+++..+..++.|++.||+|||+. .+|+||||||+||+++.++.+||+|||+++.
T Consensus 101 e~~~~-~l~~~~~~~~~--~~~~~~~~~~~~~i~~~i~~~l~~lH~~--~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~ 175 (327)
T 3aln_A 101 ELMST-SFDKFYKYVYS--VLDDVIPEEILGKITLATVKALNHLKEN--LKIIHRDIKPSNILLDRSGNIKLCDFGISGQ 175 (327)
T ss_dssp CCCSE-EHHHHHHHHHH--TTCCCCCHHHHHHHHHHHHHHHHHHHHH--HSCCCSCCCGGGEEEETTTEEEECCCSSSCC
T ss_pred eecCC-ChHHHHHHHHh--hhcccCcHHHHHHHHHHHHHHHHHHhcc--CCEeECCCCHHHEEEcCCCCEEEccCCCcee
Confidence 99985 88887753110 0013489999999999999999999984 3799999999999999999999999999976
Q ss_pred cCCC--CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 690 QGGD--AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 690 ~~~~--~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
.... .....+|..|+|||.......+. .++.++|||||||++|||+||+.||...
T Consensus 176 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~-----~~~~~~Di~slG~il~~l~~g~~pf~~~ 232 (327)
T 3aln_A 176 LVDSIAKTRDAGCRPYMAPERIDPSASRQ-----GYDVRSDVWSLGITLYELATGRFPYPKW 232 (327)
T ss_dssp -----------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC
T ss_pred cccccccccCCCCccccCceeeccccCcC-----CCCchhhHHHHHHHHHHHHHCCCCCCCc
Confidence 5332 23346899999999874321111 1578999999999999999999999643
No 258
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=1.1e-31 Score=310.87 Aligned_cols=295 Identities=18% Similarity=0.192 Sum_probs=214.2
Q ss_pred CCEEEEEcCCCCcCCCCCCCCccchhhhccCCCCCEEecCCCCCCCCCchhhhhCCCCCCEEEccCCCCCccCCcccCCC
Q 004248 86 GSVVGINISGFRRTRLGSQNPRFAADALVNLTHLASFNASRFLLPGSIPDWLGQQLPTLQALDLRSCSISGVIPFSLGNL 165 (766)
Q Consensus 86 ~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~L~ls~n~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l 165 (766)
.+++.+++++.... . +.+..+.++++|++|++++|.+.+-.|..+.. +++|++|||++|.++ .+|.. .+
T Consensus 52 ~~L~~L~Ls~N~i~---~----~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~-l~~L~~L~Ls~N~l~-~lp~~--~l 120 (562)
T 3a79_B 52 PRTKALSLSQNSIS---E----LRMPDISFLSELRVLRLSHNRIRSLDFHVFLF-NQDLEYLDVSHNRLQ-NISCC--PM 120 (562)
T ss_dssp TTCCEEECCSSCCC---C----CCGGGTTTCTTCCEEECCSCCCCEECTTTTTT-CTTCCEEECTTSCCC-EECSC--CC
T ss_pred CCcCEEECCCCCcc---c----cChhhhccCCCccEEECCCCCCCcCCHHHhCC-CCCCCEEECCCCcCC-ccCcc--cc
Confidence 45777888765432 1 22346788888999999988888766766654 888899999988888 45555 78
Q ss_pred CCCcEEEeecCcCCC-CCCccccCCCCCCEEEccCCCCCCCCCcccCCCCCC--CEEeccCCcC--CCCCCCCCCCCC--
Q 004248 166 TNLTSLYLSDNGLTG-TIPSSLGQLSVLSVLDLSRNSLTGNIPTSFGLLKNL--SSLDISSNYL--TGSIPPGLGTLS-- 238 (766)
Q Consensus 166 ~~L~~L~Ls~N~l~~-~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L--~~L~Ls~N~l--~~~~p~~l~~l~-- 238 (766)
++|++|+|++|++++ .+|..|+++++|++|+|++|++++. .+..+++| +.|+|++|.+ ++..|..+..+.
T Consensus 121 ~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~ 197 (562)
T 3a79_B 121 ASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTT 197 (562)
T ss_dssp TTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECCEE
T ss_pred ccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeecccccccccCcccccccCcc
Confidence 888888888888886 3567888888888888888888753 33444444 7777777766 555555444332
Q ss_pred -------------------------------------------------------------------------------C
Q 004248 239 -------------------------------------------------------------------------------K 239 (766)
Q Consensus 239 -------------------------------------------------------------------------------~ 239 (766)
+
T Consensus 198 ~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~~~~~ 277 (562)
T 3a79_B 198 VLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRP 277 (562)
T ss_dssp EEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHHTTSS
T ss_pred eEEEEecCccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcCcHHHHHHHHHhhhccc
Confidence 5
Q ss_pred ccEEEccCCCCCCCCcccc-----------------------------------------------------CCCCCCCE
Q 004248 240 LQYLNVSNNSLASSIPAQL-----------------------------------------------------GDLDSLVD 266 (766)
Q Consensus 240 L~~L~Ls~N~l~~~~p~~l-----------------------------------------------------~~l~~L~~ 266 (766)
|++|++++|.++|.+|..+ ..+++|++
T Consensus 278 L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~l~~L~~ 357 (562)
T 3a79_B 278 VEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMVCPPSPSSFTF 357 (562)
T ss_dssp EEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCE
T ss_pred ccEEEEeccEeeccccchhhhcccccchheehhhcccceeecChhhhhhhhccCcceEEEccCCCcccccCccCCCCceE
Confidence 5666666666666666544 56778888
Q ss_pred EEccCCcCCccCCcccCCCCCCCEEEccCccCccc--cCCCccCCCCcccEEEccCCCCCC-CCCcccCCCCCCCEEEcc
Q 004248 267 LDLSMNSLSGSVPSELRGLRSLQKFVIGNNFLSGN--LSVNLFPTVSQLQIIVLRQNGFTG-PPPDVLWSMPQLRLLDIS 343 (766)
Q Consensus 267 L~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~--~~~~~~~~l~~L~~L~L~~N~l~~-~~p~~l~~l~~L~~L~Ls 343 (766)
|++++|++++.+|..++++++|++|++++|.+++. +| ..|..+++|+.|++++|++++ .++..+..+++|+.|+++
T Consensus 358 L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~-~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~ 436 (562)
T 3a79_B 358 LNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVA-LMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLS 436 (562)
T ss_dssp EECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHH-HTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECC
T ss_pred EECCCCccccchhhhhcccCCCCEEECCCCCcCCcccch-hhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECC
Confidence 88888888888888888888888888888888752 22 235778888888888888888 444457788888888888
Q ss_pred CCCCCCCCCcccccCCCCCcEEEccCCcCccCCCc---CCCCCCEEeccCCcCccccChh
Q 004248 344 RNNFTGPLPNSRSNVNTSTVELNISQNMFYGGLTP---VLGRFRLVDLSGNYFEGRVPEY 400 (766)
Q Consensus 344 ~N~l~g~~p~~~~~~~~~l~~L~ls~N~l~g~~~~---~l~~l~~ldLs~N~l~g~~p~~ 400 (766)
+|++++.+|.... .+|+.|++++|.++ .+|. .+++|+.|||++|+++ .+|..
T Consensus 437 ~n~l~~~~~~~l~---~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~ 491 (562)
T 3a79_B 437 SNMLTGSVFRCLP---PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLK-SVPDG 491 (562)
T ss_dssp SSCCCGGGGSSCC---TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCC-CCCTT
T ss_pred CCCCCcchhhhhc---CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCC-CCCHH
Confidence 8888877664321 57888888888887 4554 3567888888888888 46655
No 259
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=6.8e-34 Score=304.64 Aligned_cols=204 Identities=18% Similarity=0.231 Sum_probs=163.5
Q ss_pred hCCCCccceeecCCcceEEEEEEcCCcEEEEEEeecccc---CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEEE
Q 004248 533 TGDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSV---KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVY 609 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~---~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV~ 609 (766)
.++|+..+.||+|+||.||+|...+ .||+|.+..... ..+.+.+|++++++++||||+++++++.. ++..++||
T Consensus 32 ~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~iv~ 108 (319)
T 2y4i_B 32 FEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMS-PPHLAIIT 108 (319)
T ss_dssp CSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEEC-SSCEEEEC
T ss_pred HHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEec-CCceEEEe
Confidence 4678889999999999999998754 599999865432 24568899999999999999999998876 56799999
Q ss_pred eeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhh
Q 004248 610 KYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCA 689 (766)
Q Consensus 610 Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~ 689 (766)
||+++|+|.+++...+ ..+++.++..++.|++.||+|||+. +|+||||||+||+++ ++.+||+|||+++.
T Consensus 109 e~~~~~~L~~~l~~~~------~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~ 178 (319)
T 2y4i_B 109 SLCKGRTLYSVVRDAK------IVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITDFGLFSI 178 (319)
T ss_dssp BCCCSEEHHHHTTSSC------CCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECCCSCCC-
T ss_pred ecccCCcHHHHHHhcC------CCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEeecCCccc
Confidence 9999999999997543 2489999999999999999999998 999999999999998 67999999999865
Q ss_pred cC--------CCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 690 QG--------GDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 690 ~~--------~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
.. .......+|..|+|||.......+.......++.++|||||||++|||+||+.||...
T Consensus 179 ~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~ 246 (319)
T 2y4i_B 179 SGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQ 246 (319)
T ss_dssp ---------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSC
T ss_pred cccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 42 1223345788999999775432111000112588999999999999999999999643
No 260
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=2.4e-33 Score=303.25 Aligned_cols=196 Identities=14% Similarity=0.179 Sum_probs=143.1
Q ss_pred hCCCCcc-ceeecCCcceEEEEEEc-CCcEEEEEEeeccccCHHHHHHHH-HHHhhcCCCCcccceeEEEec---CCcEE
Q 004248 533 TGDFSDA-NLIKNGHSGDLFRGILE-GGIPVVIKRIDLQSVKTEAYLLEL-DFFSKVSHARLVPLLGHCMER---ENEKF 606 (766)
Q Consensus 533 ~~~~~~~-~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~E~-~~l~~l~H~niv~l~~~~~~~---~~~~~ 606 (766)
.++|... ++||+|+||.||+|+.. +|+.||||++.... ...+|+ ..++.++||||+++++++... +...+
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 102 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP----KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLL 102 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH----HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH----HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEE
Confidence 3567774 46999999999999954 79999999996532 222333 345667999999999987542 23489
Q ss_pred EEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCC---CCcEEecc
Q 004248 607 LVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDD---KFEVRLGS 683 (766)
Q Consensus 607 lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~---~~~~kl~D 683 (766)
+|||||++|+|.+++.+... ..+++.++..++.|++.||+|||+. +|+||||||+||+++. ++.+||+|
T Consensus 103 lv~e~~~gg~L~~~l~~~~~-----~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~D 174 (336)
T 3fhr_A 103 IIMECMEGGELFSRIQERGD-----QAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTD 174 (336)
T ss_dssp EEEECCTTEEHHHHHHTC-C-----CCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECC
T ss_pred EEEeccCCCCHHHHHHhcCC-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEec
Confidence 99999999999999986532 3599999999999999999999998 9999999999999986 45599999
Q ss_pred chhhhhcCC-CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCC
Q 004248 684 LSEVCAQGG-DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSS 749 (766)
Q Consensus 684 FG~a~~~~~-~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~ 749 (766)
||+++.... ......+|+.|+|||...... ++.++|||||||++|||+||+.||...
T Consensus 175 fg~~~~~~~~~~~~~~~t~~y~aPE~~~~~~---------~~~~~Di~slG~il~~l~~g~~pf~~~ 232 (336)
T 3fhr_A 175 FGFAKETTQNALQTPCYTPYYVAPEVLGPEK---------YDKSCDMWSLGVIMYILLCGFPPFYSN 232 (336)
T ss_dssp CTTCEEC----------------------CH---------HHHHHHHHHHHHHHHHHHHSSCCC---
T ss_pred cccceeccccccccCCCCcCccChhhhCCCC---------CCchhhHHHHHHHHHHHHHCCCCCCCc
Confidence 999986533 234557799999999875443 578999999999999999999999543
No 261
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=99.98 E-value=4.9e-34 Score=305.01 Aligned_cols=199 Identities=20% Similarity=0.188 Sum_probs=162.7
Q ss_pred HHhCCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC-------HHHHHHHHHHHhhc----CCCCcccceeEE
Q 004248 531 AATGDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK-------TEAYLLELDFFSKV----SHARLVPLLGHC 598 (766)
Q Consensus 531 ~~~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~-------~~~~~~E~~~l~~l----~H~niv~l~~~~ 598 (766)
...++|...+.||+|+||.||+|+. .+++.||||++...... ...+.+|++++.++ +||||+++++++
T Consensus 28 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~ 107 (312)
T 2iwi_A 28 AFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWF 107 (312)
T ss_dssp -----CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC
T ss_pred hhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEE
Confidence 3457899999999999999999984 67899999999654321 23466799999999 899999999977
Q ss_pred EecCCcEEEEEee-CCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeC-CC
Q 004248 599 MERENEKFLVYKY-MPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLD-DK 676 (766)
Q Consensus 599 ~~~~~~~~lV~Ey-~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~-~~ 676 (766)
.. ++..++|||| +++|+|.+++.++. .+++.++..++.|++.||+|||+. +|+||||||+||+++ ++
T Consensus 108 ~~-~~~~~~v~e~~~~~~~L~~~l~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~ 176 (312)
T 2iwi_A 108 ET-QEGFMLVLERPLPAQDLFDYITEKG-------PLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILIDLRR 176 (312)
T ss_dssp ------CEEEEECCSSEEEHHHHHHHHC-------SCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEETTT
T ss_pred ec-CCeEEEEEEecCCCCCHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEeCCC
Confidence 65 4678999999 88999999997653 389999999999999999999998 999999999999999 88
Q ss_pred CcEEeccchhhhhcCC-CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 677 FEVRLGSLSEVCAQGG-DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 677 ~~~kl~DFG~a~~~~~-~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
+.+||+|||+++.... ......+|..|+|||......+ .+.++|||||||++|||+||+.||..
T Consensus 177 ~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~--------~~~~~Di~slG~il~~l~~g~~pf~~ 241 (312)
T 2iwi_A 177 GCAKLIDFGSGALLHDEPYTDFDGTRVYSPPEWISRHQY--------HALPATVWSLGILLYDMVCGDIPFER 241 (312)
T ss_dssp TEEEECCCSSCEECCSSCBCCCCSCTTTSCHHHHHHSCB--------CHHHHHHHHHHHHHHHHHHSSCSCCS
T ss_pred CeEEEEEcchhhhcccCcccccCCcccccCceeeecCCC--------CCccchHHHHHHHHHHHHHCCCCCCC
Confidence 9999999999987643 3345568999999997754432 35689999999999999999999953
No 262
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=99.98 E-value=2.6e-33 Score=313.56 Aligned_cols=204 Identities=15% Similarity=0.205 Sum_probs=153.5
Q ss_pred CCccceeecCCcceEEEEEEcCCcEEEEEEeeccccCHHHHHHHHHHHhhc-CCCCcccceeEEEecCCcEEEEEeeCCC
Q 004248 536 FSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKV-SHARLVPLLGHCMERENEKFLVYKYMPN 614 (766)
Q Consensus 536 ~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~~lV~Ey~~~ 614 (766)
|...++||+|+||+||.+...+|+.||||++.... .+.+.+|+++++++ +|||||++++++.+ ++..|+|||||+
T Consensus 17 ~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~--~~~~~~E~~~l~~l~~HpnIv~~~~~~~~-~~~~~lv~E~~~- 92 (434)
T 2rio_A 17 VVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF--CDIALMEIKLLTESDDHPNVIRYYCSETT-DRFLYIALELCN- 92 (434)
T ss_dssp EEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGGG--HHHHHHHHHHHHHHTTSTTBCCEEEEEEC-SSEEEEEECCCS-
T ss_pred eeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHH--HHHHHHHHHHHHhccCCCCcCeEEEEEec-CCeEEEEEecCC-
Confidence 44468899999999987777789999999986543 45688999999987 89999999997654 568999999996
Q ss_pred CChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCC-------------CcEEe
Q 004248 615 GDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDK-------------FEVRL 681 (766)
Q Consensus 615 GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~-------------~~~kl 681 (766)
|+|.+++.............++..+..++.||+.||+|||+. +||||||||+|||++.+ +.+||
T Consensus 93 gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL 169 (434)
T 2rio_A 93 LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILI 169 (434)
T ss_dssp EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEE
T ss_pred CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccCCCceEEEE
Confidence 699999976543111111124445678999999999999998 99999999999999754 48999
Q ss_pred ccchhhhhcCCC-------CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCC
Q 004248 682 GSLSEVCAQGGD-------AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLS 748 (766)
Q Consensus 682 ~DFG~a~~~~~~-------~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~ 748 (766)
+|||+++..... .....||+.|+|||.+.....+. ....++.++|||||||++|||+| |+.||..
T Consensus 170 ~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~--~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~ 242 (434)
T 2rio_A 170 SDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQ--TKRRLTRSIDIFSMGCVFYYILSKGKHPFGD 242 (434)
T ss_dssp CCCTTCEECCC--------------CCTTSCHHHHSCCCTTS--CCCCCCTHHHHHHHHHHHHHHHTTSCCTTCS
T ss_pred cccccceecCCCCccceeeecCCCCCCCccCHHHhccccccc--cccCcchhhhhHhHHHHHHHHHhCCCCCCCC
Confidence 999999876432 12346899999999875421100 00116899999999999999999 9999954
No 263
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=99.98 E-value=1.9e-33 Score=296.96 Aligned_cols=196 Identities=20% Similarity=0.316 Sum_probs=156.0
Q ss_pred CCCCccceeecCCcceEEEEEEc--CCc--EEEEEEeecccc----CHHHHHHHHHHHhhcCCCCcccceeEEEecCCcE
Q 004248 534 GDFSDANLIKNGHSGDLFRGILE--GGI--PVVIKRIDLQSV----KTEAYLLELDFFSKVSHARLVPLLGHCMERENEK 605 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~~--~g~--~vavK~l~~~~~----~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 605 (766)
++|+..+.||+|+||.||+|+.. +++ .||||+++.... ..+++.+|++++++++||||+++++++.. +..
T Consensus 18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~ 95 (291)
T 1u46_A 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT--PPM 95 (291)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS--SSC
T ss_pred hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcc--CCc
Confidence 46888999999999999999843 333 699999865422 25679999999999999999999997764 358
Q ss_pred EEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccch
Q 004248 606 FLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLS 685 (766)
Q Consensus 606 ~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG 685 (766)
++||||+++|+|.+++.... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 96 ~~v~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg 166 (291)
T 1u46_A 96 KMVTELAPLGSLLDRLRKHQ------GHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFG 166 (291)
T ss_dssp EEEEECCTTCBHHHHHHHHG------GGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCT
T ss_pred eeeEecccCCCHHHHHHhcc------CCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEEcccc
Confidence 99999999999999997643 2489999999999999999999998 99999999999999999999999999
Q ss_pred hhhhcCCCC------ccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCCC
Q 004248 686 EVCAQGGDA------HQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLSS 749 (766)
Q Consensus 686 ~a~~~~~~~------~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~~ 749 (766)
+++...... ....+|..|+|||...... ++.++|||||||++|||+| |+.||...
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~---------~~~~~Di~slG~il~~l~~~g~~p~~~~ 228 (291)
T 1u46_A 167 LMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRT---------FSHASDTWMFGVTLWEMFTYGQEPWIGL 228 (291)
T ss_dssp TCEECCC-CCEEEC-----CCGGGCCHHHHHHCE---------EEHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred ccccccccccchhhhccCCCCceeeCchhhcCCC---------CCchhhHHHHHHHHHHHHhCCCCCcccC
Confidence 998763321 2234567899999875433 4789999999999999999 99999543
No 264
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.98 E-value=6.1e-31 Score=311.56 Aligned_cols=276 Identities=22% Similarity=0.231 Sum_probs=174.7
Q ss_pred CCEEEEEcCCCCcCCCCCCCCccchhhhccCCCCCEEecCCCCCCCCCchhhhhCCCCCCEEEccCCCCCccCCcccCCC
Q 004248 86 GSVVGINISGFRRTRLGSQNPRFAADALVNLTHLASFNASRFLLPGSIPDWLGQQLPTLQALDLRSCSISGVIPFSLGNL 165 (766)
Q Consensus 86 ~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~L~ls~n~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l 165 (766)
.+++.+++++.... . +.+..+.++++|++|++++|.+.+..|..+.. +++|++|+|++|.+++..+..|+++
T Consensus 25 ~~l~~L~Ls~n~l~---~----~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~-l~~L~~L~L~~n~l~~l~~~~~~~l 96 (680)
T 1ziw_A 25 TNITVLNLTHNQLR---R----LPAANFTRYSQLTSLDVGFNTISKLEPELCQK-LPMLKVLNLQHNELSQLSDKTFAFC 96 (680)
T ss_dssp TTCSEEECCSSCCC---C----CCGGGGGGGTTCSEEECCSSCCCCCCTTHHHH-CTTCCEEECCSSCCCCCCTTTTTTC
T ss_pred CCCcEEECCCCCCC---C----cCHHHHhCCCcCcEEECCCCccCccCHHHHhc-ccCcCEEECCCCccCccChhhhccC
Confidence 35777888765432 1 22346778888899999888888877777765 8888888888888887666678888
Q ss_pred CCCcEEEeecCcCCCCCCccccCCCCCCEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCCC--CCCCccEE
Q 004248 166 TNLTSLYLSDNGLTGTIPSSLGQLSVLSVLDLSRNSLTGNIPTSFGLLKNLSSLDISSNYLTGSIPPGLG--TLSKLQYL 243 (766)
Q Consensus 166 ~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~--~l~~L~~L 243 (766)
++|++|+|++|++++..|..|+++++|++|+|++|.+++..|..|+++++|++|++++|.+++..|..+. .+++|++|
T Consensus 97 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L 176 (680)
T 1ziw_A 97 TNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKL 176 (680)
T ss_dssp TTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEE
T ss_pred CCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEE
Confidence 8888888888888877777888888888888888888888888888888888888888888765554332 44666666
Q ss_pred EccCCCCCCCCcccc---------------------------------------------------CCCC--CCCEEEcc
Q 004248 244 NVSNNSLASSIPAQL---------------------------------------------------GDLD--SLVDLDLS 270 (766)
Q Consensus 244 ~Ls~N~l~~~~p~~l---------------------------------------------------~~l~--~L~~L~Ls 270 (766)
++++|++++..|..+ .+++ +|++|+|+
T Consensus 177 ~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls 256 (680)
T 1ziw_A 177 ELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLS 256 (680)
T ss_dssp ECTTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECT
T ss_pred ECCCCcccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECC
Confidence 666666665544433 2222 25566666
Q ss_pred CCcCCccCCcccCCCCCCCEEEccCccCccccCCCccCCCCcccEEEccCCCCCC-----CCCc----ccCCCCCCCEEE
Q 004248 271 MNSLSGSVPSELRGLRSLQKFVIGNNFLSGNLSVNLFPTVSQLQIIVLRQNGFTG-----PPPD----VLWSMPQLRLLD 341 (766)
Q Consensus 271 ~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~~~~~~~~~l~~L~~L~L~~N~l~~-----~~p~----~l~~l~~L~~L~ 341 (766)
+|++++..|..|+.+++|++|++++|.+++..|.. |..+++|+.|++++|...+ .+|. .|..+++|++|+
T Consensus 257 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~-~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~ 335 (680)
T 1ziw_A 257 YNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHS-LHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLN 335 (680)
T ss_dssp TSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTT-TTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEE
T ss_pred CCCcCccCcccccCcccccEeeCCCCccCccChhh-hcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEE
Confidence 66665555555666666666666666555433321 2333333333333322221 1111 344445555555
Q ss_pred ccCCCCCCCCCcccccCCCCCcEEEccCCc
Q 004248 342 ISRNNFTGPLPNSRSNVNTSTVELNISQNM 371 (766)
Q Consensus 342 Ls~N~l~g~~p~~~~~~~~~l~~L~ls~N~ 371 (766)
+++|++++..|. .+..+++|++|++++|.
T Consensus 336 l~~n~l~~~~~~-~~~~l~~L~~L~Ls~n~ 364 (680)
T 1ziw_A 336 MEDNDIPGIKSN-MFTGLINLKYLSLSNSF 364 (680)
T ss_dssp CCSCCBCCCCTT-TTTTCTTCCEEECTTCB
T ss_pred CCCCccCCCChh-HhccccCCcEEECCCCc
Confidence 555555544332 22333444444444444
No 265
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=99.98 E-value=3.3e-33 Score=327.72 Aligned_cols=197 Identities=21% Similarity=0.304 Sum_probs=164.4
Q ss_pred hCCCCccceeecCCcceEEEEEEc----CCcEEEEEEeeccccC--HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEE
Q 004248 533 TGDFSDANLIKNGHSGDLFRGILE----GGIPVVIKRIDLQSVK--TEAYLLELDFFSKVSHARLVPLLGHCMERENEKF 606 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~~~----~g~~vavK~l~~~~~~--~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~ 606 (766)
.++|+..+.||+|+||.||+|... .+..||||++...... .++|.+|+.++++++|||||++++++. ++..|
T Consensus 389 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~--~~~~~ 466 (656)
T 2j0j_A 389 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT--ENPVW 466 (656)
T ss_dssp GGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC--SSSCE
T ss_pred cccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe--cCceE
Confidence 356888899999999999999853 2568999998653322 468999999999999999999999774 45789
Q ss_pred EEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchh
Q 004248 607 LVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSE 686 (766)
Q Consensus 607 lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~ 686 (766)
+||||+++|+|.+++..++ ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 467 lv~E~~~~g~L~~~l~~~~------~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~DFG~ 537 (656)
T 2j0j_A 467 IIMELCTLGELRSFLQVRK------FSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGL 537 (656)
T ss_dssp EEEECCTTCBHHHHHHHTT------TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCC
T ss_pred EEEEcCCCCcHHHHHHhcc------CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEEecCC
Confidence 9999999999999997543 2489999999999999999999998 999999999999999999999999999
Q ss_pred hhhcCCCC----ccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCCC
Q 004248 687 VCAQGGDA----HQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLSS 749 (766)
Q Consensus 687 a~~~~~~~----~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~~ 749 (766)
++...... ....+|..|+|||.+.... ++.++|||||||++|||++ |+.||...
T Consensus 538 a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~---------~~~~~DiwSlG~il~ellt~g~~Pf~~~ 596 (656)
T 2j0j_A 538 SRYMEDSTYYKASKGKLPIKWMAPESINFRR---------FTSASDVWMFGVCMWEILMHGVKPFQGV 596 (656)
T ss_dssp CCSCCC----------CCGGGCCHHHHHHCC---------CCHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred CeecCCCcceeccCCCCCcceeCHHHhcCCC---------CCchhhHHHHHHHHHHHHHcCCCCCCCC
Confidence 98763321 2234567899999875433 5789999999999999997 99999543
No 266
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.98 E-value=2.3e-33 Score=303.18 Aligned_cols=190 Identities=17% Similarity=0.132 Sum_probs=157.7
Q ss_pred CCCCccceeecCCcceEEEEEEcCCcEEEEEEeecccc---------CHHHHHHHHHHHhhcC---------CCCcccce
Q 004248 534 GDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSV---------KTEAYLLELDFFSKVS---------HARLVPLL 595 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~---------~~~~~~~E~~~l~~l~---------H~niv~l~ 595 (766)
++|+..+.||+|+||+||+|+. +|+.||||++..... ..+.+.+|++++++++ |||||++.
T Consensus 20 ~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~ 98 (336)
T 2vuw_A 20 EKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLN 98 (336)
T ss_dssp HHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEE
T ss_pred ccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhc
Confidence 4578889999999999999987 689999999975431 1378999999999986 77777766
Q ss_pred eEEE-----------------e------------cCCcEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHH
Q 004248 596 GHCM-----------------E------------RENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGA 646 (766)
Q Consensus 596 ~~~~-----------------~------------~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~i 646 (766)
+.+. + .++..|+|||||++|++.+.+.+ ..+++.+++.|+.||
T Consensus 99 ~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~--------~~~~~~~~~~i~~qi 170 (336)
T 2vuw_A 99 SVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT--------KLSSLATAKSILHQL 170 (336)
T ss_dssp EEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT--------TCCCHHHHHHHHHHH
T ss_pred ceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh--------cCCCHHHHHHHHHHH
Confidence 6432 1 14679999999999987776643 138999999999999
Q ss_pred HHHhhhhc-cCCCCCeEecCCCCCCeeeCCCC--------------------cEEeccchhhhhcCCCCccceeeecccC
Q 004248 647 AEGLSYLH-HECTLPFVHRDVQASSILLDDKF--------------------EVRLGSLSEVCAQGGDAHQSRITRLLRL 705 (766)
Q Consensus 647 a~gL~yLH-~~~~~~iiHrDlKp~NILl~~~~--------------------~~kl~DFG~a~~~~~~~~~~~~t~~y~a 705 (766)
+.||+||| +. +||||||||+|||++.++ .+||+|||+|+..... ...||+.|+|
T Consensus 171 ~~aL~~lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~--~~~gt~~y~a 245 (336)
T 2vuw_A 171 TASLAVAEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG--IVVFCDVSMD 245 (336)
T ss_dssp HHHHHHHHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT--EEECCCCTTC
T ss_pred HHHHHHHHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC--cEEEeecccC
Confidence 99999999 77 999999999999999887 8999999999876433 4478999999
Q ss_pred CCCCCCCceeeeeeeeecccccceecchHH-HHHHhcCCCCCC
Q 004248 706 PQSSEQGSSGMVIYLFIIFTIFHIYFHGNP-LFSAIFNNHLNL 747 (766)
Q Consensus 706 Pe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvv-l~elltG~~p~~ 747 (766)
||.+.+.. +.++||||+|++ .+++++|..||.
T Consensus 246 PE~~~g~~----------~~~~Diwsl~~~~~~~~~~g~~p~~ 278 (336)
T 2vuw_A 246 EDLFTGDG----------DYQFDIYRLMKKENNNRWGEYHPYS 278 (336)
T ss_dssp SGGGCCCS----------SHHHHHHHHHHHHHTTCTTSCCTHH
T ss_pred hhhhcCCC----------ccceehhhhhCCCCcccccccCCCc
Confidence 99886432 468999998777 788999999984
No 267
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=99.98 E-value=4.3e-33 Score=297.86 Aligned_cols=204 Identities=19% Similarity=0.185 Sum_probs=163.6
Q ss_pred HhCCCCccceeecCCcceEEEEEEcCCcEEEEEEeeccccC---HHHHHHHHHHHhhcC--CCCcccceeEEEecCCcEE
Q 004248 532 ATGDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVK---TEAYLLELDFFSKVS--HARLVPLLGHCMERENEKF 606 (766)
Q Consensus 532 ~~~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~---~~~~~~E~~~l~~l~--H~niv~l~~~~~~~~~~~~ 606 (766)
..++|+..+.||+|+||.||+|...+++.||||++...... .+++.+|++++++++ ||||+++++++.. ++..+
T Consensus 26 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~-~~~~~ 104 (313)
T 3cek_A 26 KGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEIT-DQYIY 104 (313)
T ss_dssp TTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEEC-SSEEE
T ss_pred ccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeec-CCEEE
Confidence 34568899999999999999999888999999999754432 467899999999997 5999999998766 56899
Q ss_pred EEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchh
Q 004248 607 LVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSE 686 (766)
Q Consensus 607 lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~ 686 (766)
+||| +.+|+|.+++.... .+++.++..++.|+++||+|||+. +|+||||||+||++++ +.+||+|||+
T Consensus 105 lv~e-~~~~~L~~~l~~~~-------~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~-~~~kL~Dfg~ 172 (313)
T 3cek_A 105 MVME-CGNIDLNSWLKKKK-------SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVD-GMLKLIDFGI 172 (313)
T ss_dssp EEEC-CCSEEHHHHHHHCS-------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEET-TEEEECCCSS
T ss_pred EEEe-cCCCcHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEEC-CeEEEeeccc
Confidence 9999 56789999997654 389999999999999999999998 9999999999999964 8999999999
Q ss_pred hhhcCCC-----CccceeeecccCCCCCCCCceeee--eeeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 687 VCAQGGD-----AHQSRITRLLRLPQSSEQGSSGMV--IYLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 687 a~~~~~~-----~~~~~~t~~y~aPe~~~~~~~g~~--~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
++..... .....+|..|+|||.......... .....++.++|||||||++|||+||+.||..
T Consensus 173 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~ 241 (313)
T 3cek_A 173 ANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ 241 (313)
T ss_dssp SCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred cccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhh
Confidence 9865322 123468999999998754211000 0001268899999999999999999999954
No 268
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=99.98 E-value=5.1e-33 Score=310.58 Aligned_cols=196 Identities=14% Similarity=0.149 Sum_probs=155.6
Q ss_pred CCCCccceeecCCcceEEEEEEcCCcEEEEEEeeccccCHHHHHHHHHHHhhc-CCCCcccceeEEEecCCcEEEEEeeC
Q 004248 534 GDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKV-SHARLVPLLGHCMERENEKFLVYKYM 612 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~~lV~Ey~ 612 (766)
.+|...++||+|+||.||.....+|+.||||++..... +.+.+|+++++++ +|||||++++++.+ ++..|+|||||
T Consensus 24 ~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~--~~~~~E~~~l~~l~~HpnIv~l~~~~~~-~~~~~lv~E~~ 100 (432)
T 3p23_A 24 ISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF--SFADREVQLLRESDEHPNVIRYFCTEKD-RQFQYIAIELC 100 (432)
T ss_dssp EEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE--EECHHHHHHHHHSCCCTTBCCEEEEEEE-TTEEEEEEECC
T ss_pred EEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH--HHHHHHHHHHHhccCCCCcCeEEEEEec-CCEEEEEEECC
Confidence 35788899999999997655567789999999965432 2356899999999 79999999997765 56899999999
Q ss_pred CCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCC-----CCcEEeccchhh
Q 004248 613 PNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDD-----KFEVRLGSLSEV 687 (766)
Q Consensus 613 ~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~-----~~~~kl~DFG~a 687 (766)
+ |+|.+++..... ...+.++..++.||++||+|||+. +||||||||+|||++. ...+||+|||++
T Consensus 101 ~-g~L~~~l~~~~~------~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a 170 (432)
T 3p23_A 101 A-ATLQEYVEQKDF------AHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLC 170 (432)
T ss_dssp S-EEHHHHHHSSSC------CCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEECCTTEE
T ss_pred C-CCHHHHHHhcCC------CccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEecccce
Confidence 7 699999976542 244455678999999999999998 9999999999999953 346889999999
Q ss_pred hhcCC------CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc-CCCCCCC
Q 004248 688 CAQGG------DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF-NNHLNLS 748 (766)
Q Consensus 688 ~~~~~------~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt-G~~p~~~ 748 (766)
+.... ......||+.|+|||.+.....+. ++.++|||||||++|||+| |+.||..
T Consensus 171 ~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~------~t~~~DiwSlG~il~ellt~g~~pf~~ 232 (432)
T 3p23_A 171 KKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKEN------PTYTVDIFSAGCVFYYVISEGSHPFGK 232 (432)
T ss_dssp ECC------------CCSCTTSCCGGGTSCC---C------CCTHHHHHHHHHHHHHHHTTSCBTTBS
T ss_pred eeccCCCcceeeccccCCCcCccChhhhhcccccC------CCcHHHHHHHHHHHHHHHcCCCCCcch
Confidence 86532 223456899999999886432222 5789999999999999999 8999843
No 269
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.97 E-value=6e-33 Score=328.19 Aligned_cols=190 Identities=20% Similarity=0.277 Sum_probs=161.2
Q ss_pred CCCCccceeecCCcceEEEEEEc--CCcEEEEEEeecccc--CHHHHHHHHHHHhhcCCCCcccceeEEEecCCc----E
Q 004248 534 GDFSDANLIKNGHSGDLFRGILE--GGIPVVIKRIDLQSV--KTEAYLLELDFFSKVSHARLVPLLGHCMERENE----K 605 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~~--~g~~vavK~l~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~----~ 605 (766)
++|+..+.||+|+||.||+|... +|+.||||++..... ..+.|.+|++++++++|||||++++++...+.. .
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~ 159 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVG 159 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCcee
Confidence 67999999999999999999964 689999999864332 245789999999999999999999988764321 6
Q ss_pred EEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccch
Q 004248 606 FLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLS 685 (766)
Q Consensus 606 ~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG 685 (766)
|+||||+++|+|.+++.. .++|.+++.|+.||+.||+|||++ +||||||||+|||++.+ .+||+|||
T Consensus 160 ~lv~E~~~g~~L~~~~~~---------~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DFG 226 (681)
T 2pzi_A 160 YIVMEYVGGQSLKRSKGQ---------KLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLG 226 (681)
T ss_dssp EEEEECCCCEECC----C---------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCCT
T ss_pred EEEEEeCCCCcHHHHHhC---------CCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEecc
Confidence 999999999999987743 389999999999999999999998 99999999999999986 99999999
Q ss_pred hhhhcCCCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCC
Q 004248 686 EVCAQGGDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNL 747 (766)
Q Consensus 686 ~a~~~~~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~ 747 (766)
+++..... ....||+.|+|||.+..+ .+.++|||||||++|||++|..||.
T Consensus 227 ~a~~~~~~-~~~~gt~~y~aPE~~~~~----------~~~~sDi~slG~~l~~l~~g~~~~~ 277 (681)
T 2pzi_A 227 AVSRINSF-GYLYGTPGFQAPEIVRTG----------PTVATDIYTVGRTLAALTLDLPTRN 277 (681)
T ss_dssp TCEETTCC-SCCCCCTTTSCTTHHHHC----------SCHHHHHHHHHHHHHHHHSCCCEET
T ss_pred cchhcccC-CccCCCccccCHHHHcCC----------CCCceehhhhHHHHHHHHhCCCCCc
Confidence 99876543 445789999999976432 3689999999999999999998874
No 270
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.97 E-value=1e-30 Score=316.81 Aligned_cols=289 Identities=22% Similarity=0.225 Sum_probs=187.7
Q ss_pred CccceeecCCCEEEEEcCCCCcCCCCCCCCccchhhhccCCCCCEEecCCCCCCCCCchhhhhCCCCCCEEEccCCCCCc
Q 004248 77 VWNGVRCQNGSVVGINISGFRRTRLGSQNPRFAADALVNLTHLASFNASRFLLPGSIPDWLGQQLPTLQALDLRSCSISG 156 (766)
Q Consensus 77 ~W~gv~C~~~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~L~ls~n~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g 156 (766)
+|..|.+-..+++.++|++..... ..+..+.++++|++|++++|...+.|++....++++|++|+|++|.+++
T Consensus 15 ~L~~vP~lp~~l~~LdLs~N~i~~-------i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~ 87 (844)
T 3j0a_A 15 NLTQVPQVLNTTERLLLSFNYIRT-------VTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYF 87 (844)
T ss_dssp CSSCCCSSCTTCCEEEEESCCCCE-------ECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCE
T ss_pred CCCCCCCCCCCcCEEECCCCcCCc-------cChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcc
Confidence 577776644678888988754321 1123556677777777777766666643322347777777777777777
Q ss_pred cCCcccCCCCCCcEEEeecCcCCCCCCcc--ccCCCCCCEEEccCCCCCCCCC-cccCCCCCCCEEeccCCcCCCCCCCC
Q 004248 157 VIPFSLGNLTNLTSLYLSDNGLTGTIPSS--LGQLSVLSVLDLSRNSLTGNIP-TSFGLLKNLSSLDISSNYLTGSIPPG 233 (766)
Q Consensus 157 ~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~--l~~L~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~ 233 (766)
..|..|+++++|++|+|++|.+++.+|.. +.++++|++|+|++|.+++..| ..|+++++|++|+|++|.+++..|..
T Consensus 88 ~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~ 167 (844)
T 3j0a_A 88 LHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHE 167 (844)
T ss_dssp ECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGG
T ss_pred cCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHH
Confidence 66777777777777777777776655554 6677777777777777766544 45667777777777777666554444
Q ss_pred CC--------------------------CCCC------ccEEEccCCCCCCCCccccCC---------------------
Q 004248 234 LG--------------------------TLSK------LQYLNVSNNSLASSIPAQLGD--------------------- 260 (766)
Q Consensus 234 l~--------------------------~l~~------L~~L~Ls~N~l~~~~p~~l~~--------------------- 260 (766)
+. .+++ |+.|++++|.+++.+|..+..
T Consensus 168 l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~ 247 (844)
T 3j0a_A 168 LEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGF 247 (844)
T ss_dssp GHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSS
T ss_pred cccccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccc
Confidence 33 3332 666666666555544433221
Q ss_pred -----------------CCCCCEEEccCCcCCccCCcccCCCCCCCEEEccCccCccccCCCccCCCCcccEEEccCCCC
Q 004248 261 -----------------LDSLVDLDLSMNSLSGSVPSELRGLRSLQKFVIGNNFLSGNLSVNLFPTVSQLQIIVLRQNGF 323 (766)
Q Consensus 261 -----------------l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~~~~~~~~~l~~L~~L~L~~N~l 323 (766)
.++|+.|++++|.+.+..|..|..+++|+.|++++|.+++..+. .|..+++|+.|+|++|++
T Consensus 248 ~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~-~~~~l~~L~~L~Ls~N~l 326 (844)
T 3j0a_A 248 GFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADE-AFYGLDNLQVLNLSYNLL 326 (844)
T ss_dssp SCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTT-TTTTCSSCCEEEEESCCC
T ss_pred cccccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChH-HhcCCCCCCEEECCCCCC
Confidence 14567777777777766677777777777777777777654443 456777777777777777
Q ss_pred CCCCCcccCCCCCCCEEEccCCCCCCCCCcccccCCCCCcEEEccCCcCcc
Q 004248 324 TGPPPDVLWSMPQLRLLDISRNNFTGPLPNSRSNVNTSTVELNISQNMFYG 374 (766)
Q Consensus 324 ~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~L~ls~N~l~g 374 (766)
++..|..|..+++|+.|++++|++++..+ ..+..+++|+.|++++|.+.+
T Consensus 327 ~~~~~~~~~~l~~L~~L~L~~N~i~~~~~-~~~~~l~~L~~L~Ls~N~l~~ 376 (844)
T 3j0a_A 327 GELYSSNFYGLPKVAYIDLQKNHIAIIQD-QTFKFLEKLQTLDLRDNALTT 376 (844)
T ss_dssp SCCCSCSCSSCTTCCEEECCSCCCCCCCS-SCSCSCCCCCEEEEETCCSCC
T ss_pred CccCHHHhcCCCCCCEEECCCCCCCccCh-hhhcCCCCCCEEECCCCCCCc
Confidence 77777777777777777777777765444 334556677777777776654
No 271
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=99.97 E-value=6.4e-33 Score=296.82 Aligned_cols=202 Identities=14% Similarity=0.159 Sum_probs=147.7
Q ss_pred hCCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC---HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEE
Q 004248 533 TGDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK---TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLV 608 (766)
Q Consensus 533 ~~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~---~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV 608 (766)
.++|+..+.||+|+||.||+|.. .+|+.||||++...... .+.+.++..+++.++||||+++++++.. ++..++|
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~-~~~~~lv 102 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFIT-NTDVFIA 102 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-SSEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEec-CCcEEEE
Confidence 35688899999999999999996 47899999999765432 2334455567888899999999998876 5689999
Q ss_pred EeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhh
Q 004248 609 YKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVC 688 (766)
Q Consensus 609 ~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~ 688 (766)
|||+ ++.+..+..... ..+++..+..++.|+++||+|||+. .+|+||||||+||+++.++.+||+|||+++
T Consensus 103 ~e~~-~~~~~~l~~~~~------~~~~~~~~~~~~~~i~~~l~~lH~~--~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~ 173 (318)
T 2dyl_A 103 MELM-GTCAEKLKKRMQ------GPIPERILGKMTVAIVKALYYLKEK--HGVIHRDVKPSNILLDERGQIKLCDFGISG 173 (318)
T ss_dssp ECCC-SEEHHHHHHHHT------SCCCHHHHHHHHHHHHHHHHHHHHH--HCCCCCCCCGGGEEECTTSCEEECCCTTC-
T ss_pred Eecc-CCcHHHHHHHhc------cCCCHHHHHHHHHHHHHHHHHHHhh--CCEEeCCCCHHHEEECCCCCEEEEECCCch
Confidence 9999 445555544322 2489999999999999999999972 179999999999999999999999999997
Q ss_pred hcCC--CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 689 AQGG--DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 689 ~~~~--~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
.... ......+|..|+|||........... ++.++|||||||++|||+||+.||..
T Consensus 174 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~----~~~~~Di~slG~il~~l~~g~~pf~~ 231 (318)
T 2dyl_A 174 RLVDDKAKDRSAGCAAYMAPERIDPPDPTKPD----YDIRADVWSLGISLVELATGQFPYKN 231 (318)
T ss_dssp -------------CCTTCCHHHHC------------CCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred hccCCccccccCCCccccChhhcccccccccC----CccccchhhHHHHHHHHHhCCCCCCC
Confidence 6532 23345689999999987532211111 57899999999999999999999964
No 272
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=99.97 E-value=8.4e-33 Score=319.17 Aligned_cols=199 Identities=21% Similarity=0.224 Sum_probs=167.1
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeecccc--CHHHHHHHHHHHhhcCCCCcccceeEEEe-----cCCcE
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSV--KTEAYLLELDFFSKVSHARLVPLLGHCME-----RENEK 605 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~-----~~~~~ 605 (766)
++|...+.||+|+||.||+|.. .+|+.||||++..... ..+++.+|++++++++|||||++++++.. .++..
T Consensus 14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~ 93 (676)
T 3qa8_A 14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLP 93 (676)
T ss_dssp ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSC
T ss_pred CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeE
Confidence 6799999999999999999985 5789999999865422 25679999999999999999999997533 14568
Q ss_pred EEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCc---EEec
Q 004248 606 FLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFE---VRLG 682 (766)
Q Consensus 606 ~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~---~kl~ 682 (766)
++|||||++|+|.+++..... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+
T Consensus 94 ~LVmEy~~ggsL~~~L~~~~~----~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL~ 166 (676)
T 3qa8_A 94 LLAMEYCEGGDLRKYLNQFEN----CCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKII 166 (676)
T ss_dssp CCEEECCSSCBHHHHHHSSSC----TTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEEC
T ss_pred EEEEEeCCCCCHHHHHHhccc----CCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEEc
Confidence 999999999999999976432 13488999999999999999999998 9999999999999997765 9999
Q ss_pred cchhhhhcCCC--CccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 683 SLSEVCAQGGD--AHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 683 DFG~a~~~~~~--~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
|||+++..... .....+|..|+|||...... ++.++|||||||++|||+||+.||..
T Consensus 167 DFG~a~~~~~~~~~~~~~gt~~Y~APE~l~~~~---------~s~ksDIwSLGviLyeLltG~~Pf~~ 225 (676)
T 3qa8_A 167 DLGYAKELDQGELCTEFVGTLQYLAPELLEQKK---------YTVTVDYWSFGTLAFECITGFRPFLP 225 (676)
T ss_dssp SCCCCCBTTSCCCCCCCCSCCTTCSSCSSCCSC---------CSTTHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ccccccccccccccccccCCcccCChHHhccCC---------CCchhHHHHHHHHHHHHHHCCCCCCc
Confidence 99999876332 34457899999999986544 47899999999999999999999964
No 273
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=99.97 E-value=2.3e-32 Score=288.55 Aligned_cols=171 Identities=12% Similarity=0.042 Sum_probs=147.8
Q ss_pred CCCCccceeecCCcceEEEEEE-cCCcEEEEEEeeccccC----HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEEE
Q 004248 534 GDFSDANLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVK----TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLV 608 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~----~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~lV 608 (766)
++|+..+.||+|+||.||+|.. .+|+.||||.+...... .++|.+|++++++++||||+++++++.. ++..|+|
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~-~~~~~lv 109 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHT-RAGGLVV 109 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEE-TTEEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEE-CCcEEEE
Confidence 5688999999999999999996 45899999999765432 3679999999999999999999998766 5689999
Q ss_pred EeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhh
Q 004248 609 YKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVC 688 (766)
Q Consensus 609 ~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~ 688 (766)
|||+++|+|.+++.+. ....+..+|+.|++.||+|||+. +|+||||||+|||+++++.+||+++|.
T Consensus 110 ~e~~~g~~L~~~l~~~---------~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~~~-- 175 (286)
T 3uqc_A 110 AEWIRGGSLQEVADTS---------PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYPAT-- 175 (286)
T ss_dssp EECCCEEEHHHHHTTC---------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSCCC--
T ss_pred EEecCCCCHHHHHhcC---------CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEeccc--
Confidence 9999999999999532 34557888999999999999998 999999999999999999999986542
Q ss_pred hcCCCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCCCc
Q 004248 689 AQGGDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLSSR 750 (766)
Q Consensus 689 ~~~~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~~~ 750 (766)
++| ++.++|||||||++|||+||+.||....
T Consensus 176 ---------------~~~----------------~~~~~Di~slG~il~elltg~~Pf~~~~ 206 (286)
T 3uqc_A 176 ---------------MPD----------------ANPQDDIRGIGASLYALLVNRWPLPEAG 206 (286)
T ss_dssp ---------------CTT----------------CCHHHHHHHHHHHHHHHHHSEECSCCCS
T ss_pred ---------------cCC----------------CCchhHHHHHHHHHHHHHHCCCCCCcCC
Confidence 221 4689999999999999999999996543
No 274
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.97 E-value=8e-31 Score=306.26 Aligned_cols=303 Identities=21% Similarity=0.200 Sum_probs=228.3
Q ss_pred CEEEEEcCCCCcCCCCCCCCccchhhhccCCCCCEEecCCCCCCCCCchhhhhCCCCCCEEEccCCCCCccCCcccCCCC
Q 004248 87 SVVGINISGFRRTRLGSQNPRFAADALVNLTHLASFNASRFLLPGSIPDWLGQQLPTLQALDLRSCSISGVIPFSLGNLT 166 (766)
Q Consensus 87 ~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~L~ls~n~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~ 166 (766)
+...+++++.... .+.+..+.++++|++|++++|.+.+..|..+.. +++|++|+|++|.+++..|..+++++
T Consensus 57 ~L~~L~Ls~n~l~-------~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~-l~~L~~L~L~~n~l~~~~~~~~~~l~ 128 (606)
T 3vq2_A 57 ELQWLDLSRCEIE-------TIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSG-LTSLENLVAVETKLASLESFPIGQLI 128 (606)
T ss_dssp TCCEEECTTCCCC-------EECTTTTTTCTTCCEEECTTCCCCCCCTTSSTT-CTTCCEEECTTSCCCCSSSSCCTTCT
T ss_pred cCcEEeCCCCccc-------ccCHHHhhchhhcCEeECCCCcccccChhhcCC-cccCCEEEccCCccccccccccCCCC
Confidence 4666777654322 122345677778888888888777766766654 77778888887777776667777777
Q ss_pred CCcEEEeecCcCCC-CCCccccCCCCCCEEEccCCCCCCCCCccc-----------------------------------
Q 004248 167 NLTSLYLSDNGLTG-TIPSSLGQLSVLSVLDLSRNSLTGNIPTSF----------------------------------- 210 (766)
Q Consensus 167 ~L~~L~Ls~N~l~~-~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~----------------------------------- 210 (766)
+|++|+|++|.+++ .+|..++++++|++|+|++|++++..|..|
T Consensus 129 ~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~~L~~ 208 (606)
T 3vq2_A 129 TLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGIKLHE 208 (606)
T ss_dssp TCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTCCCCEECTTTTTTCEEEE
T ss_pred CCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccCCCcceeCcccccCceeee
Confidence 77777777777765 467777777777777777776665433211
Q ss_pred --------------------------------------------------------------------------------
Q 004248 211 -------------------------------------------------------------------------------- 210 (766)
Q Consensus 211 -------------------------------------------------------------------------------- 210 (766)
T Consensus 209 L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~l~~L~ 288 (606)
T 3vq2_A 209 LTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVKFHCLANVS 288 (606)
T ss_dssp EEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECCCTTCCGGGGSCGGGTTCS
T ss_pred eeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheeccccccccccccccccCCCCC
Confidence
Q ss_pred ----------------------------------------------------------CCCCCCCEEeccCCcCCCC--C
Q 004248 211 ----------------------------------------------------------GLLKNLSSLDISSNYLTGS--I 230 (766)
Q Consensus 211 ----------------------------------------------------------~~l~~L~~L~Ls~N~l~~~--~ 230 (766)
..+++|++|++++|.+++. +
T Consensus 289 ~L~l~~~~~~~l~~l~~~~~L~~L~l~~n~l~~lp~~~l~~L~~L~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~ 368 (606)
T 3vq2_A 289 AMSLAGVSIKYLEDVPKHFKWQSLSIIRCQLKQFPTLDLPFLKSLTLTMNKGSISFKKVALPSLSYLDLSRNALSFSGCC 368 (606)
T ss_dssp EEEEESCCCCCCCCCCTTCCCSEEEEESCCCSSCCCCCCSSCCEEEEESCSSCEECCCCCCTTCCEEECCSSCEEEEEEC
T ss_pred EEEecCccchhhhhccccccCCEEEcccccCcccccCCCCccceeeccCCcCccchhhccCCCCCEEECcCCccCCCcch
Confidence 1233444445555554433 2
Q ss_pred CCCCCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCccCC-cccCCCCCCCEEEccCccCccccCCCccCC
Q 004248 231 PPGLGTLSKLQYLNVSNNSLASSIPAQLGDLDSLVDLDLSMNSLSGSVP-SELRGLRSLQKFVIGNNFLSGNLSVNLFPT 309 (766)
Q Consensus 231 p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p-~~l~~l~~L~~L~ls~N~l~g~~~~~~~~~ 309 (766)
|..+..+++|++|++++|.+++ +|..+..+++|++|++++|++.+..| ..+.++++|++|++++|.+++..|.. +..
T Consensus 369 ~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~-~~~ 446 (606)
T 3vq2_A 369 SYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGI-FLG 446 (606)
T ss_dssp CHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTT-TTT
T ss_pred hhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhh-hcC
Confidence 5556677889999999999875 66888999999999999999998877 68899999999999999998766654 588
Q ss_pred CCcccEEEccCCCCCC-CCCcccCCCCCCCEEEccCCCCCCCCCcccccCCCCCcEEEccCCcCccCCCc---CCCCCCE
Q 004248 310 VSQLQIIVLRQNGFTG-PPPDVLWSMPQLRLLDISRNNFTGPLPNSRSNVNTSTVELNISQNMFYGGLTP---VLGRFRL 385 (766)
Q Consensus 310 l~~L~~L~L~~N~l~~-~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~L~ls~N~l~g~~~~---~l~~l~~ 385 (766)
+++|+.|++++|++++ .+|..+..+++|+.|+|++|++++..|.. +..+++|+.|++++|.+.+..|. .+++|+.
T Consensus 447 l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 525 (606)
T 3vq2_A 447 LTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGV-FDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLST 525 (606)
T ss_dssp CTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTT-TTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCE
T ss_pred CCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhh-hcccccCCEEECCCCcCCCcCHHHccCCCcCCE
Confidence 8999999999999988 47888999999999999999999877754 45678899999999999887664 3567899
Q ss_pred EeccCCcCccccChhh
Q 004248 386 VDLSGNYFEGRVPEYV 401 (766)
Q Consensus 386 ldLs~N~l~g~~p~~~ 401 (766)
|||++|+++ .+|..+
T Consensus 526 L~l~~N~l~-~~p~~~ 540 (606)
T 3vq2_A 526 LDCSFNRIE-TSKGIL 540 (606)
T ss_dssp EECTTSCCC-CEESCG
T ss_pred EECCCCcCc-ccCHhH
Confidence 999999998 566654
No 275
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.97 E-value=4.4e-30 Score=300.89 Aligned_cols=306 Identities=25% Similarity=0.264 Sum_probs=210.0
Q ss_pred CEEEEEcCCCCcCCCCCCCCccchhhhccCCCCCEEecCCCCCCCCCchhhhhCCCCCCEEEccCCCCCccCCcccCCCC
Q 004248 87 SVVGINISGFRRTRLGSQNPRFAADALVNLTHLASFNASRFLLPGSIPDWLGQQLPTLQALDLRSCSISGVIPFSLGNLT 166 (766)
Q Consensus 87 ~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~L~ls~n~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~ 166 (766)
.++.+||++.... .+.+..+.++++|++|++++|.+.+-.|..| .+|++|++|+|++|+|++..+..|.+++
T Consensus 53 ~~~~LdLs~N~i~-------~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f-~~L~~L~~L~Ls~N~l~~l~~~~f~~L~ 124 (635)
T 4g8a_A 53 STKNLDLSFNPLR-------HLGSYSFFSFPELQVLDLSRCEIQTIEDGAY-QSLSHLSTLILTGNPIQSLALGAFSGLS 124 (635)
T ss_dssp TCCEEECTTSCCC-------EECTTTTTTCTTCCEEECTTCCCCEECTTTT-TTCTTCCEEECTTCCCCEECGGGGTTCT
T ss_pred CCCEEEeeCCCCC-------CCCHHHHhCCCCCCEEECCCCcCCCcChhHh-cCCCCCCEEEccCCcCCCCCHHHhcCCC
Confidence 4667777765432 1223467888999999999998865334444 4489999999999999887778889999
Q ss_pred CCcEEEeecCcCCCCCCccccCCCCCCEEEccCCCCCC-CCCcccCCCCCCCEEeccCCcCCCCCCCCCCCC--------
Q 004248 167 NLTSLYLSDNGLTGTIPSSLGQLSVLSVLDLSRNSLTG-NIPTSFGLLKNLSSLDISSNYLTGSIPPGLGTL-------- 237 (766)
Q Consensus 167 ~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l-------- 237 (766)
+|++|+|++|++++..+..|+++++|++|+|++|++++ .+|..++.+++|++|+|++|++++..|..+..+
T Consensus 125 ~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~ 204 (635)
T 4g8a_A 125 SLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNL 204 (635)
T ss_dssp TCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCC
T ss_pred CCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhh
Confidence 99999999999987777778999999999999999875 467888889999999999887764333221100
Q ss_pred --------------------------------------------------------------------------------
Q 004248 238 -------------------------------------------------------------------------------- 237 (766)
Q Consensus 238 -------------------------------------------------------------------------------- 237 (766)
T Consensus 205 ~~~ls~n~l~~i~~~~~~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~ 284 (635)
T 4g8a_A 205 SLDLSLNPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIE 284 (635)
T ss_dssp EEECTTCCCCEECTTTTTTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEE
T ss_pred hhhcccCcccccCcccccchhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhh
Confidence
Q ss_pred -------------------------------------------CCccEEEccCCCCCCCCc-------------------
Q 004248 238 -------------------------------------------SKLQYLNVSNNSLASSIP------------------- 255 (766)
Q Consensus 238 -------------------------------------------~~L~~L~Ls~N~l~~~~p------------------- 255 (766)
.+|+.|++++|.+.+..+
T Consensus 285 ~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~L~~l~l~~n~~~~~ 364 (635)
T 4g8a_A 285 EFRLAYLDYYLDGIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNA 364 (635)
T ss_dssp EEEEECCCSCEEECTTTTGGGTTCSEEEEESCEEEECGGGGSCCCCSEEEEESCEESSCCCCBCTTCCEEEEESCCSCCB
T ss_pred hhhhhhhcccccchhhhhhhhcccccccccccccccccccccchhhhhhhcccccccCcCcccchhhhhcccccccCCCC
Confidence 112233333332221111
Q ss_pred cccCCCCCCCEEEccCCcCCc-------------------------------------------------c-CCcccCCC
Q 004248 256 AQLGDLDSLVDLDLSMNSLSG-------------------------------------------------S-VPSELRGL 285 (766)
Q Consensus 256 ~~l~~l~~L~~L~Ls~N~l~g-------------------------------------------------~-~p~~l~~l 285 (766)
.....+++|+.|++++|.+.. . .+..+..+
T Consensus 365 ~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l 444 (635)
T 4g8a_A 365 FSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSL 444 (635)
T ss_dssp CCCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEEECSCCTTCTTCCEEECTTSEEESTTSSCTTTTC
T ss_pred cccccccccccchhhccccccccccccchhhhhhhhhhhccccccccccccccccccccchhhhhccccccccccccccc
Confidence 011234556666666655421 1 11234556
Q ss_pred CCCCEEEccCccCccccCCCccCCCCcccEEEccCCCC-CCCCCcccCCCCCCCEEEccCCCCCCCCCcccccCCCCCcE
Q 004248 286 RSLQKFVIGNNFLSGNLSVNLFPTVSQLQIIVLRQNGF-TGPPPDVLWSMPQLRLLDISRNNFTGPLPNSRSNVNTSTVE 364 (766)
Q Consensus 286 ~~L~~L~ls~N~l~g~~~~~~~~~l~~L~~L~L~~N~l-~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~ 364 (766)
++++.++++.|.+.+..+ ..+..++.|+.|+|++|++ .+.+|..|..+++|++|||++|++++..|.. +..+++|++
T Consensus 445 ~~l~~l~ls~n~l~~~~~-~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~-f~~l~~L~~ 522 (635)
T 4g8a_A 445 RNLIYLDISHTHTRVAFN-GIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTA-FNSLSSLQV 522 (635)
T ss_dssp TTCCEEECTTSCCEECCT-TTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTT-TTTCTTCCE
T ss_pred cccccccccccccccccc-cccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHH-HcCCCCCCE
Confidence 677777777777775444 3457778888888888864 4456777888888888888888888766643 455678888
Q ss_pred EEccCCcCccCCCc---CCCCCCEEeccCCcCccccChhhh
Q 004248 365 LNISQNMFYGGLTP---VLGRFRLVDLSGNYFEGRVPEYVH 402 (766)
Q Consensus 365 L~ls~N~l~g~~~~---~l~~l~~ldLs~N~l~g~~p~~~~ 402 (766)
|+|++|++++..|. .+++|+.|||++|++++..|..+.
T Consensus 523 L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~ 563 (635)
T 4g8a_A 523 LNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQ 563 (635)
T ss_dssp EECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTT
T ss_pred EECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHH
Confidence 88888888776553 456788888888888887777653
No 276
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.97 E-value=3.8e-30 Score=311.67 Aligned_cols=277 Identities=21% Similarity=0.229 Sum_probs=220.3
Q ss_pred CCCCCEEecCCCCCCCCCchhhhhCCCCCCEEEccCCCCCccC-CcccCCCCCCcEEEeecCcCCCCCCccccCCCCCCE
Q 004248 116 LTHLASFNASRFLLPGSIPDWLGQQLPTLQALDLRSCSISGVI-PFSLGNLTNLTSLYLSDNGLTGTIPSSLGQLSVLSV 194 (766)
Q Consensus 116 l~~L~~L~ls~n~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~-p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~ 194 (766)
.++|+.|++++|.+.+..|..+.. +++|++|||++|.+.+.+ |..|+++++|++|+|++|.+++..|..|.++++|++
T Consensus 23 p~~l~~LdLs~N~i~~i~~~~~~~-l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 101 (844)
T 3j0a_A 23 LNTTERLLLSFNYIRTVTASSFPF-LEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFE 101 (844)
T ss_dssp CTTCCEEEEESCCCCEECSSSCSS-CCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCC
T ss_pred CCCcCEEECCCCcCCccChhHCcc-cccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCE
Confidence 468999999999998877877765 999999999999776666 788999999999999999999989999999999999
Q ss_pred EEccCCCCCCCCCcc--cCCCCCCCEEeccCCcCCCCCC-CCCCCCCCccEEEccCCCCCCCCccccCCC--CC------
Q 004248 195 LDLSRNSLTGNIPTS--FGLLKNLSSLDISSNYLTGSIP-PGLGTLSKLQYLNVSNNSLASSIPAQLGDL--DS------ 263 (766)
Q Consensus 195 L~Ls~N~l~~~~p~~--~~~l~~L~~L~Ls~N~l~~~~p-~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l--~~------ 263 (766)
|+|++|.+++.+|.. |.++++|++|+|++|.+++..| ..|+++++|++|+|++|.+++..|..+..+ ++
T Consensus 102 L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L 181 (844)
T 3j0a_A 102 LRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSL 181 (844)
T ss_dssp EECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEE
T ss_pred eeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEEC
Confidence 999999999877765 9999999999999999997655 579999999999999999988777665544 44
Q ss_pred ------------------------CCEEEccCCcCCccCCcccCC-----------------------------------
Q 004248 264 ------------------------LVDLDLSMNSLSGSVPSELRG----------------------------------- 284 (766)
Q Consensus 264 ------------------------L~~L~Ls~N~l~g~~p~~l~~----------------------------------- 284 (766)
|++|++++|.+++.+|..+..
T Consensus 182 ~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~ 261 (844)
T 3j0a_A 182 AANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFA 261 (844)
T ss_dssp CCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTT
T ss_pred CCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChhhhh
Confidence 555555555554444332211
Q ss_pred ---CCCCCEEEccCccCccccCCCccCCCCcccEEEccCCCCCCCCCcccCCCCCCCEEEccCCCCCCCCCcccccCCCC
Q 004248 285 ---LRSLQKFVIGNNFLSGNLSVNLFPTVSQLQIIVLRQNGFTGPPPDVLWSMPQLRLLDISRNNFTGPLPNSRSNVNTS 361 (766)
Q Consensus 285 ---l~~L~~L~ls~N~l~g~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~ 361 (766)
.++|+.|++++|.+.+.. ...|..+++|+.|+|++|++++..|..|..+++|++|+|++|++++..|. .+..+++
T Consensus 262 ~l~~~~L~~L~Ls~n~l~~~~-~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~~l~~ 339 (844)
T 3j0a_A 262 GLARSSVRHLDLSHGFVFSLN-SRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSS-NFYGLPK 339 (844)
T ss_dssp TTTTSCCCEEECTTCCCCEEC-SCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSC-SCSSCTT
T ss_pred ccccCCccEEECCCCcccccC-hhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHH-HhcCCCC
Confidence 145667777777766443 34457788888888888888888888888888888888888888866664 3456678
Q ss_pred CcEEEccCCcCccCCCc---CCCCCCEEeccCCcCcc
Q 004248 362 TVELNISQNMFYGGLTP---VLGRFRLVDLSGNYFEG 395 (766)
Q Consensus 362 l~~L~ls~N~l~g~~~~---~l~~l~~ldLs~N~l~g 395 (766)
|+.|++++|.+.+..+. .+++|+.|+|++|.+++
T Consensus 340 L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~ 376 (844)
T 3j0a_A 340 VAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTT 376 (844)
T ss_dssp CCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCC
T ss_pred CCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCc
Confidence 88888888888654442 35678888888887765
No 277
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.97 E-value=1.9e-30 Score=300.49 Aligned_cols=156 Identities=29% Similarity=0.246 Sum_probs=113.0
Q ss_pred CCCCCCCEEEccCCcCCccC--CcccCCCCCCCEEEccCccCccccCCCccCCCCcccEEEccCCCCCCCCC-cccCCCC
Q 004248 259 GDLDSLVDLDLSMNSLSGSV--PSELRGLRSLQKFVIGNNFLSGNLSVNLFPTVSQLQIIVLRQNGFTGPPP-DVLWSMP 335 (766)
Q Consensus 259 ~~l~~L~~L~Ls~N~l~g~~--p~~l~~l~~L~~L~ls~N~l~g~~~~~~~~~l~~L~~L~L~~N~l~~~~p-~~l~~l~ 335 (766)
..+++|++|++++|++++.. |..+.++++|++|++++|.+++..+ . +..+++|+.|++++|.+++.+| ..+.+++
T Consensus 344 ~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~-~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~ 421 (570)
T 2z63_A 344 VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSS-N-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLR 421 (570)
T ss_dssp CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEE-E-EETCTTCCEEECTTSEEESCTTSCTTTTCT
T ss_pred ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCccccccc-c-ccccCCCCEEEccCCccccccchhhhhcCC
Confidence 45678888888888888654 6777888888888888888875433 3 5778888888888888887765 5677888
Q ss_pred CCCEEEccCCCCCCCCCcccccCCCCCcEEEccCCcCc-cCCCc---CCCCCCEEeccCCcCccccChhhhh--cc--cC
Q 004248 336 QLRLLDISRNNFTGPLPNSRSNVNTSTVELNISQNMFY-GGLTP---VLGRFRLVDLSGNYFEGRVPEYVHS--NA--SS 407 (766)
Q Consensus 336 ~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~L~ls~N~l~-g~~~~---~l~~l~~ldLs~N~l~g~~p~~~~~--~~--~~ 407 (766)
+|++|++++|++++.+|.. +..+++|+.|++++|.+. +.+|. .+++|+.|||++|++++..|..+.. ++ -.
T Consensus 422 ~L~~L~l~~n~l~~~~~~~-~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 500 (570)
T 2z63_A 422 NLIYLDISHTHTRVAFNGI-FNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLN 500 (570)
T ss_dssp TCCEEECTTSCCEECCTTT-TTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred CCCEEeCcCCcccccchhh-hhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEe
Confidence 8888888888888776643 355678888888888876 45554 3567888888888888777766532 11 14
Q ss_pred CCcccCCCCC
Q 004248 408 LDSNCLQNVP 417 (766)
Q Consensus 408 l~~n~l~~~~ 417 (766)
+++|.+.+.+
T Consensus 501 l~~n~l~~~~ 510 (570)
T 2z63_A 501 MASNQLKSVP 510 (570)
T ss_dssp CCSSCCSCCC
T ss_pred CCCCcCCCCC
Confidence 4556665543
No 278
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.97 E-value=7.4e-30 Score=274.99 Aligned_cols=267 Identities=21% Similarity=0.252 Sum_probs=219.1
Q ss_pred CCCCEEecCCCCCCCCCchhhhhCCCCCCEEEccCCCCCccCCcccCCCCCCcEEEeecCcCCCCCCccccCCCCCCEEE
Q 004248 117 THLASFNASRFLLPGSIPDWLGQQLPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPSSLGQLSVLSVLD 196 (766)
Q Consensus 117 ~~L~~L~ls~n~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~ 196 (766)
++|+.|++++|.+.+..+..+.. +++|++|+|++|.+++..|..|+++++|++|+|++|+++ .+|..+. ++|++|+
T Consensus 52 ~~l~~L~L~~n~i~~~~~~~~~~-l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~ 127 (330)
T 1xku_A 52 PDTALLDLQNNKITEIKDGDFKN-LKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMP--KTLQELR 127 (330)
T ss_dssp TTCCEEECCSSCCCCBCTTTTTT-CTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSCC--TTCCEEE
T ss_pred CCCeEEECCCCcCCEeChhhhcc-CCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCC-ccChhhc--ccccEEE
Confidence 57899999999998755556654 999999999999999988999999999999999999998 5777665 7999999
Q ss_pred ccCCCCCCCCCcccCCCCCCCEEeccCCcCCC--CCCCCCCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCcC
Q 004248 197 LSRNSLTGNIPTSFGLLKNLSSLDISSNYLTG--SIPPGLGTLSKLQYLNVSNNSLASSIPAQLGDLDSLVDLDLSMNSL 274 (766)
Q Consensus 197 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l 274 (766)
+++|++++..+..|.++++|+.|++++|.++. ..+..+.++++|++|++++|.++. +|..+. ++|++|++++|++
T Consensus 128 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~l 204 (330)
T 1xku_A 128 VHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT-IPQGLP--PSLTELHLDGNKI 204 (330)
T ss_dssp CCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS-CCSSCC--TTCSEEECTTSCC
T ss_pred CCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcccc-CCcccc--ccCCEEECCCCcC
Confidence 99999998888889999999999999999963 677889999999999999999985 666554 8999999999999
Q ss_pred CccCCcccCCCCCCCEEEccCccCccccCCCccCCCCcccEEEccCCCCCCCCCcccCCCCCCCEEEccCCCCCCCCCcc
Q 004248 275 SGSVPSELRGLRSLQKFVIGNNFLSGNLSVNLFPTVSQLQIIVLRQNGFTGPPPDVLWSMPQLRLLDISRNNFTGPLPNS 354 (766)
Q Consensus 275 ~g~~p~~l~~l~~L~~L~ls~N~l~g~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~ 354 (766)
++..|..+.++++|+.|++++|.+++..+ ..+..+++|+.|+|++|+++ .+|..+..+++|++|++++|++++..+..
T Consensus 205 ~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~-~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~ 282 (330)
T 1xku_A 205 TKVDAASLKGLNNLAKLGLSFNSISAVDN-GSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSND 282 (330)
T ss_dssp CEECTGGGTTCTTCCEEECCSSCCCEECT-TTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTS
T ss_pred CccCHHHhcCCCCCCEEECCCCcCceeCh-hhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhh
Confidence 99889999999999999999999986544 44578899999999999998 66778999999999999999999654433
Q ss_pred ccc-----CCCCCcEEEccCCcCcc-CCC----cCCCCCCEEeccCCc
Q 004248 355 RSN-----VNTSTVELNISQNMFYG-GLT----PVLGRFRLVDLSGNY 392 (766)
Q Consensus 355 ~~~-----~~~~l~~L~ls~N~l~g-~~~----~~l~~l~~ldLs~N~ 392 (766)
+.. ....+..+++++|.+.. .++ ..+..++.++|++|+
T Consensus 283 f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 283 FCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp SSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC----
T ss_pred cCCcccccccccccceEeecCcccccccCccccccccceeEEEecccC
Confidence 221 13566677777777642 222 235567777777764
No 279
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=99.97 E-value=2.8e-31 Score=282.02 Aligned_cols=175 Identities=14% Similarity=0.195 Sum_probs=148.8
Q ss_pred CCCCcc-ceeecCCcceEEEEEE-cCCcEEEEEEeeccccCHHHHHHHHHHH-hhcCCCCcccceeEEEe---cCCcEEE
Q 004248 534 GDFSDA-NLIKNGHSGDLFRGIL-EGGIPVVIKRIDLQSVKTEAYLLELDFF-SKVSHARLVPLLGHCME---RENEKFL 607 (766)
Q Consensus 534 ~~~~~~-~~ig~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~E~~~l-~~l~H~niv~l~~~~~~---~~~~~~l 607 (766)
++|... ++||+|+||.||+|.. .+++.||||+++. .+.+.+|++++ +..+||||+++++++.. .++..++
T Consensus 17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~l 92 (299)
T 3m2w_A 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLI 92 (299)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEE
T ss_pred cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEE
Confidence 456666 7899999999999995 6789999999863 34678899988 55699999999997754 1346899
Q ss_pred EEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCC---CCcEEeccc
Q 004248 608 VYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDD---KFEVRLGSL 684 (766)
Q Consensus 608 V~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~---~~~~kl~DF 684 (766)
||||+++|+|.+++..... ..+++.++..++.|++.||+|||+. +|+||||||+||+++. ++.+||+||
T Consensus 93 v~e~~~~~~L~~~l~~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~Df 164 (299)
T 3m2w_A 93 VMECLDGGELFSRIQDRGD-----QAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDF 164 (299)
T ss_dssp EECCCCSCBHHHHHHHCTT-----CCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCC
T ss_pred EEeecCCCcHHHHHHhccC-----CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEecc
Confidence 9999999999999986542 3589999999999999999999998 9999999999999998 789999999
Q ss_pred hhhhhcCCCCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCCCC
Q 004248 685 SEVCAQGGDAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLNLS 748 (766)
Q Consensus 685 G~a~~~~~~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~~~ 748 (766)
|+++.... .. ++.++||||+||++|||+||+.||..
T Consensus 165 g~a~~~~~-------------------~~---------~~~~~DiwslG~il~el~tg~~pf~~ 200 (299)
T 3m2w_A 165 GFAKETTG-------------------EK---------YDKSCDMWSLGVIMYILLCGYPPFYS 200 (299)
T ss_dssp TTCEECTT-------------------CG---------GGGHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred cccccccc-------------------cc---------CCchhhHHHHHHHHHHHHHCCCCCCC
Confidence 99864321 11 57899999999999999999999954
No 280
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.97 E-value=7.4e-31 Score=302.77 Aligned_cols=180 Identities=25% Similarity=0.225 Sum_probs=148.8
Q ss_pred eecCCCEEEEEcCCCCcCCCCCCCCccchhhhccCCCCCEEecCCCCCCCCCchhhhhCCCCCCEEEccCCCCCccCCcc
Q 004248 82 RCQNGSVVGINISGFRRTRLGSQNPRFAADALVNLTHLASFNASRFLLPGSIPDWLGQQLPTLQALDLRSCSISGVIPFS 161 (766)
Q Consensus 82 ~C~~~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~L~ls~n~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~ 161 (766)
.|....| .++++.+.. .++.. + .++|+.|++++|.+.+..|..+.. +++|++|+|++|.+++..|..
T Consensus 3 ~C~~~~~--c~~~~~~l~---~ip~~-----~--~~~L~~L~Ls~n~l~~~~~~~~~~-l~~L~~L~Ls~n~i~~~~~~~ 69 (549)
T 2z81_A 3 SCDASGV--CDGRSRSFT---SIPSG-----L--TAAMKSLDLSFNKITYIGHGDLRA-CANLQVLILKSSRINTIEGDA 69 (549)
T ss_dssp EECTTSE--EECTTSCCS---SCCSC-----C--CTTCCEEECCSSCCCEECSSTTSS-CTTCCEEECTTSCCCEECTTT
T ss_pred cCCCCce--EECCCCccc---ccccc-----C--CCCccEEECcCCccCccChhhhhc-CCcccEEECCCCCcCccChhh
Confidence 5765555 577654432 23322 1 268999999999998877777755 999999999999999999999
Q ss_pred cCCCCCCcEEEeecCcCCCCCCccccCCCCCCEEEccCCCCCC-CCCcccCCCCCCCEEeccCCcCCCCCC-CCCCCCCC
Q 004248 162 LGNLTNLTSLYLSDNGLTGTIPSSLGQLSVLSVLDLSRNSLTG-NIPTSFGLLKNLSSLDISSNYLTGSIP-PGLGTLSK 239 (766)
Q Consensus 162 l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~l~~l~~ 239 (766)
|+++++|++|+|++|++++..|..|+++++|++|+|++|++++ .+|..|+++++|++|++++|.+.+.+| ..+.++++
T Consensus 70 ~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~ 149 (549)
T 2z81_A 70 FYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTS 149 (549)
T ss_dssp TTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCE
T ss_pred ccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccc
Confidence 9999999999999999998878889999999999999999987 467899999999999999999655665 68999999
Q ss_pred ccEEEccCCCCCCCCccccCCCCCCCEEEccCCcC
Q 004248 240 LQYLNVSNNSLASSIPAQLGDLDSLVDLDLSMNSL 274 (766)
Q Consensus 240 L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l 274 (766)
|++|++++|++++.+|..++++++|++|+++.|.+
T Consensus 150 L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~ 184 (549)
T 2z81_A 150 LNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSES 184 (549)
T ss_dssp EEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBS
T ss_pred cCeeeccCCcccccChhhhhccccCceEecccCcc
Confidence 99999999999998888887665555555444443
No 281
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.97 E-value=1.3e-29 Score=300.08 Aligned_cols=280 Identities=20% Similarity=0.234 Sum_probs=143.7
Q ss_pred hccCCCCCEEecCCCCCCCCCchhhhhCCCCCCEEEccCCCCCc-----cCCc----ccCCCCCCcEEEeecCcCCCCCC
Q 004248 113 LVNLTHLASFNASRFLLPGSIPDWLGQQLPTLQALDLRSCSISG-----VIPF----SLGNLTNLTSLYLSDNGLTGTIP 183 (766)
Q Consensus 113 l~~l~~L~~L~ls~n~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g-----~~p~----~l~~l~~L~~L~Ls~N~l~~~~p 183 (766)
+.++++|+.|++++|.+.+..|..+.. +++|++|+|++|...+ .+|. .|..+++|++|+|++|.+++..|
T Consensus 268 ~~~l~~L~~L~L~~n~l~~~~~~~~~~-l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~~~ 346 (680)
T 1ziw_A 268 FAWLPQLEYFFLEYNNIQHLFSHSLHG-LFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKS 346 (680)
T ss_dssp TTTCTTCCEEECCSCCBSEECTTTTTT-CTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCCCCT
T ss_pred ccCcccccEeeCCCCccCccChhhhcC-CCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccCCCCh
Confidence 344444444444444444433333322 4444444444333222 1111 34444444455555555544444
Q ss_pred ccccCCCCCCEEEccCCCCCCCC--CcccCC--CCCCCEEeccCCcCCCCCCCCCCCCCCccEEEccCCCCCCCCc-ccc
Q 004248 184 SSLGQLSVLSVLDLSRNSLTGNI--PTSFGL--LKNLSSLDISSNYLTGSIPPGLGTLSKLQYLNVSNNSLASSIP-AQL 258 (766)
Q Consensus 184 ~~l~~L~~L~~L~Ls~N~l~~~~--p~~~~~--l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p-~~l 258 (766)
..|.++++|++|++++|.+++.. +..|.. .++|+.|++++|++++..|..+..+++|++|+|++|.+++.+| ..+
T Consensus 347 ~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 426 (680)
T 1ziw_A 347 NMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEW 426 (680)
T ss_dssp TTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECCSGGG
T ss_pred hHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccCcccc
Confidence 44444444444444444322110 011111 1234444444555555556666666777777777777665544 456
Q ss_pred CCCCCCCEEEccCCcCCccCCcccCCCCCCCEEEccCccCc--cccCCCccCCCCcccEEEccCCCCCCCCCcccCCCCC
Q 004248 259 GDLDSLVDLDLSMNSLSGSVPSELRGLRSLQKFVIGNNFLS--GNLSVNLFPTVSQLQIIVLRQNGFTGPPPDVLWSMPQ 336 (766)
Q Consensus 259 ~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~--g~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~ 336 (766)
.++++|++|++++|++.+..+..|..+++|+.|++++|.++ +.+|. .|..+++|+.|+|++|++++.+|..|..+++
T Consensus 427 ~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~-~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~ 505 (680)
T 1ziw_A 427 RGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPS-PFQPLRNLTILDLSNNNIANINDDMLEGLEK 505 (680)
T ss_dssp TTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSC-TTTTCTTCCEEECCSSCCCCCCTTTTTTCTT
T ss_pred cCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCc-ccccCCCCCEEECCCCCCCcCChhhhccccc
Confidence 66666777777776666666666666666666666666654 23333 2355666666666666666666666666666
Q ss_pred CCEEEccCCCCCCCC----C---cccccCCCCCcEEEccCCcCccCCCc----CCCCCCEEeccCCcCcc
Q 004248 337 LRLLDISRNNFTGPL----P---NSRSNVNTSTVELNISQNMFYGGLTP----VLGRFRLVDLSGNYFEG 395 (766)
Q Consensus 337 L~~L~Ls~N~l~g~~----p---~~~~~~~~~l~~L~ls~N~l~g~~~~----~l~~l~~ldLs~N~l~g 395 (766)
|++|++++|++++.. | ...+..+++|+.|++++|.+. .+|+ .+.+|+.|||++|++++
T Consensus 506 L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~-~i~~~~~~~l~~L~~L~Ls~N~l~~ 574 (680)
T 1ziw_A 506 LEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFD-EIPVEVFKDLFELKIIDLGLNNLNT 574 (680)
T ss_dssp CCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCC
T ss_pred cCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCC-CCCHHHcccccCcceeECCCCCCCc
Confidence 666666666665321 1 111334455666666666665 3332 34556666666666664
No 282
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.97 E-value=4e-30 Score=277.34 Aligned_cols=266 Identities=22% Similarity=0.250 Sum_probs=201.8
Q ss_pred CCCCEEecCCCCCCCCCchhhhhCCCCCCEEEccCCCCCccCCcccCCCCCCcEEEeecCcCCCCCCccccCCCCCCEEE
Q 004248 117 THLASFNASRFLLPGSIPDWLGQQLPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPSSLGQLSVLSVLD 196 (766)
Q Consensus 117 ~~L~~L~ls~n~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~ 196 (766)
++|+.|++++|.+.+-.|..+.. +++|++|+|++|.+++..|..|+++++|++|+|++|+++ .+|..+. ++|++|+
T Consensus 54 ~~l~~L~l~~n~i~~~~~~~~~~-l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~--~~L~~L~ 129 (332)
T 2ft3_A 54 PDTTLLDLQNNDISELRKDDFKG-LQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLP--SSLVELR 129 (332)
T ss_dssp TTCCEEECCSSCCCEECTTTTTT-CTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCC-SCCSSCC--TTCCEEE
T ss_pred CCCeEEECCCCcCCccCHhHhhC-CCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCC-ccCcccc--ccCCEEE
Confidence 57888899988887655556654 888999999999988888888888999999999999888 5666655 7889999
Q ss_pred ccCCCCCCCCCcccCCCCCCCEEeccCCcCC--CCCCCCCCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCcC
Q 004248 197 LSRNSLTGNIPTSFGLLKNLSSLDISSNYLT--GSIPPGLGTLSKLQYLNVSNNSLASSIPAQLGDLDSLVDLDLSMNSL 274 (766)
Q Consensus 197 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~--~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l 274 (766)
+++|++++..+..|.++++|+.|++++|.++ +..|..+..+ +|++|++++|++++ +|..+. ++|++|++++|++
T Consensus 130 l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~i 205 (332)
T 2ft3_A 130 IHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG-IPKDLP--ETLNELHLDHNKI 205 (332)
T ss_dssp CCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-CCSSSC--SSCSCCBCCSSCC
T ss_pred CCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc-cCcccc--CCCCEEECCCCcC
Confidence 9999988766667888899999999998885 3667778777 88899999998875 565554 6888889999998
Q ss_pred CccCCcccCCCCCCCEEEccCccCccccCCCccCCCCcccEEEccCCCCCCCCCcccCCCCCCCEEEccCCCCCCCCCcc
Q 004248 275 SGSVPSELRGLRSLQKFVIGNNFLSGNLSVNLFPTVSQLQIIVLRQNGFTGPPPDVLWSMPQLRLLDISRNNFTGPLPNS 354 (766)
Q Consensus 275 ~g~~p~~l~~l~~L~~L~ls~N~l~g~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~ 354 (766)
++..|..+.++++|+.|++++|.+++..+ ..|..+++|+.|+|++|+++ .+|..+..+++|+.|++++|++++..+..
T Consensus 206 ~~~~~~~l~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~ 283 (332)
T 2ft3_A 206 QAIELEDLLRYSKLYRLGLGHNQIRMIEN-GSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVND 283 (332)
T ss_dssp CCCCTTSSTTCTTCSCCBCCSSCCCCCCT-TGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTS
T ss_pred CccCHHHhcCCCCCCEEECCCCcCCcCCh-hHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhH
Confidence 88877888888889999999888876443 34577888888999988888 56667888888999999988888554433
Q ss_pred cccC-----CCCCcEEEccCCcCc--cCCC---cCCCCCCEEeccCCc
Q 004248 355 RSNV-----NTSTVELNISQNMFY--GGLT---PVLGRFRLVDLSGNY 392 (766)
Q Consensus 355 ~~~~-----~~~l~~L~ls~N~l~--g~~~---~~l~~l~~ldLs~N~ 392 (766)
+... ...+..|++++|.+. +..| ..+.+|+.+++++|+
T Consensus 284 ~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 284 FCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp SSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred ccccccccccccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 2221 345667777777665 2222 234566667776663
No 283
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=99.97 E-value=3.8e-32 Score=302.17 Aligned_cols=210 Identities=15% Similarity=0.139 Sum_probs=155.2
Q ss_pred CCCCccceeecCCcceEEEEE-EcCCcEEEEEEeecccc----CHHHHHHHHHHHhhcCC-CCcccceeE----------
Q 004248 534 GDFSDANLIKNGHSGDLFRGI-LEGGIPVVIKRIDLQSV----KTEAYLLELDFFSKVSH-ARLVPLLGH---------- 597 (766)
Q Consensus 534 ~~~~~~~~ig~G~~g~Vy~~~-~~~g~~vavK~l~~~~~----~~~~~~~E~~~l~~l~H-~niv~l~~~---------- 597 (766)
..|...++||+|+||.||+|+ ..+|+.||||++..... ..+.|.+|+.+++.++| +|......+
T Consensus 78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 157 (413)
T 3dzo_A 78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV 157 (413)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEE
T ss_pred eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhc
Confidence 346677899999999999999 56799999999873322 25679999999999987 332211111
Q ss_pred -----------EEec----CCcEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeE
Q 004248 598 -----------CMER----ENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFV 662 (766)
Q Consensus 598 -----------~~~~----~~~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ii 662 (766)
+... ....+++|+++ +|+|.+++............++|..+..++.|+++||+|||+. +||
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ii 233 (413)
T 3dzo_A 158 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GLV 233 (413)
T ss_dssp ECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEE
T ss_pred ccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---Ccc
Confidence 1110 12357777766 5799998852110001123588999999999999999999998 999
Q ss_pred ecCCCCCCeeeCCCCcEEeccchhhhhcCCCCccceeeecccCCCCCCCCc--eeeeeeeeecccccceecchHHHHHHh
Q 004248 663 HRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQSSEQGS--SGMVIYLFIIFTIFHIYFHGNPLFSAI 740 (766)
Q Consensus 663 HrDlKp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~t~~y~aPe~~~~~~--~g~~~~~~~~~~~~Dv~s~Gvvl~ell 740 (766)
||||||+|||++.++.+||+|||+++..+......+| +.|+|||.+.... +|. .....++.++|||||||++|||+
T Consensus 234 HrDiKp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~-~~~~~~~~~~DvwSlGvil~ell 311 (413)
T 3dzo_A 234 HTYLRPVDIVLDQRGGVFLTGFEHLVRDGASAVSPIG-RGFAPPETTAERMLPFGQ-HHPTLMTFAFDTWTLGLAIYWIW 311 (413)
T ss_dssp CSCCCGGGEEECTTCCEEECCGGGCEETTEEECCCCC-TTTCCHHHHHHHTSTTGG-GCCEEECHHHHHHHHHHHHHHHH
T ss_pred cCCcccceEEEecCCeEEEEeccceeecCCccccCCC-CceeCchhhhcccccccc-ccCcCCCchhhHHHHHHHHHHHH
Confidence 9999999999999999999999999877655555667 8999999873211 000 00012689999999999999999
Q ss_pred cCCCCCCCC
Q 004248 741 FNNHLNLSS 749 (766)
Q Consensus 741 tG~~p~~~~ 749 (766)
||+.||...
T Consensus 312 tg~~Pf~~~ 320 (413)
T 3dzo_A 312 CADLPNTDD 320 (413)
T ss_dssp HSSCCCCTT
T ss_pred HCCCCCCCc
Confidence 999999644
No 284
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.97 E-value=2.3e-31 Score=283.62 Aligned_cols=258 Identities=24% Similarity=0.242 Sum_probs=130.5
Q ss_pred CCCEEEccCCCCCccCCcccCCCCCCcEEEeecCcCCC--CCCccccCCCCCCEEEccCCCCCCCCCcccCCCCCCCEEe
Q 004248 143 TLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTG--TIPSSLGQLSVLSVLDLSRNSLTGNIPTSFGLLKNLSSLD 220 (766)
Q Consensus 143 ~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~--~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 220 (766)
+|++|+|++|.++...+..|.++++|++|+|++|.++. ..|..+..+++|++|+|++|.++ .+|..+..+++|++|+
T Consensus 29 ~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~ 107 (306)
T 2z66_A 29 SATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLD 107 (306)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCEEE
T ss_pred CCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCCCccc-cChhhcCCCCCCCEEE
Confidence 34444555554443333334445555555555554441 12334444455555555555544 2444444555555555
Q ss_pred ccCCcCCCCCC-CCCCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCc-cCCcccCCCCCCCEEEccCccC
Q 004248 221 ISSNYLTGSIP-PGLGTLSKLQYLNVSNNSLASSIPAQLGDLDSLVDLDLSMNSLSG-SVPSELRGLRSLQKFVIGNNFL 298 (766)
Q Consensus 221 Ls~N~l~~~~p-~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g-~~p~~l~~l~~L~~L~ls~N~l 298 (766)
+++|.+++..+ ..+..+++|++|++++|.+.+..|..+.++++|++|++++|.+++ .+|..+..+++|++|++++|.+
T Consensus 108 l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l 187 (306)
T 2z66_A 108 FQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQL 187 (306)
T ss_dssp CTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCC
T ss_pred CCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCc
Confidence 55555543322 344555555555555555554444455555555555555555544 3445555555555555555555
Q ss_pred ccccCCCccCCCCcccEEEccCCCCCCCCCcccCCCCCCCEEEccCCCCCCCCCcccccCCCCCcEEEccCCcCccCCC-
Q 004248 299 SGNLSVNLFPTVSQLQIIVLRQNGFTGPPPDVLWSMPQLRLLDISRNNFTGPLPNSRSNVNTSTVELNISQNMFYGGLT- 377 (766)
Q Consensus 299 ~g~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~L~ls~N~l~g~~~- 377 (766)
++..|. .|..+++|+.|+|++|++++..+..+..+++|+.|||++|++++..|........+++.|++++|.+.+...
T Consensus 188 ~~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~~ 266 (306)
T 2z66_A 188 EQLSPT-AFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEH 266 (306)
T ss_dssp CEECTT-TTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGGG
T ss_pred CCcCHH-HhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecccCh
Confidence 443222 234555555555555555555555555556666666666666555554333322355666666666655322
Q ss_pred ----cCCCCCCEEeccCCcCccccChhhh
Q 004248 378 ----PVLGRFRLVDLSGNYFEGRVPEYVH 402 (766)
Q Consensus 378 ----~~l~~l~~ldLs~N~l~g~~p~~~~ 402 (766)
.++...+.+....|.+....|..+.
T Consensus 267 ~~~~~~l~~~~~~~~~~~~~~C~~p~~~~ 295 (306)
T 2z66_A 267 QSFLQWIKDQRQLLVEVERMECATPSDKQ 295 (306)
T ss_dssp HHHHHHHHHTGGGBSCGGGCBEEESGGGT
T ss_pred HHHHHHHHhhhhhhccccccccCCchhhC
Confidence 2233444455666777777777653
No 285
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.96 E-value=2.4e-28 Score=274.74 Aligned_cols=273 Identities=19% Similarity=0.180 Sum_probs=210.3
Q ss_pred CCEEEEEcCCCCcCCCCCCCCccchhhhccCCCCCEEecCCCCCCCCCchhhhhCCCCCCEEEccCCCCCccCCcccCCC
Q 004248 86 GSVVGINISGFRRTRLGSQNPRFAADALVNLTHLASFNASRFLLPGSIPDWLGQQLPTLQALDLRSCSISGVIPFSLGNL 165 (766)
Q Consensus 86 ~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~L~ls~n~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l 165 (766)
.+++.+++++.... .+ + .+..+++|++|++++|.+.+ +| ++ .+++|++|+|++|.+++. | ++++
T Consensus 42 ~~L~~L~Ls~n~l~---~~-~-----~l~~l~~L~~L~Ls~n~l~~-~~--~~-~l~~L~~L~Ls~N~l~~~-~--~~~l 105 (457)
T 3bz5_A 42 ATLTSLDCHNSSIT---DM-T-----GIEKLTGLTKLICTSNNITT-LD--LS-QNTNLTYLACDSNKLTNL-D--VTPL 105 (457)
T ss_dssp TTCCEEECCSSCCC---CC-T-----TGGGCTTCSEEECCSSCCSC-CC--CT-TCTTCSEEECCSSCCSCC-C--CTTC
T ss_pred CCCCEEEccCCCcc---cC-h-----hhcccCCCCEEEccCCcCCe-Ec--cc-cCCCCCEEECcCCCCcee-e--cCCC
Confidence 35778888875432 11 1 47788999999999998877 45 44 489999999999999875 3 8899
Q ss_pred CCCcEEEeecCcCCCCCCccccCCCCCCEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCCCCCCCccEEEc
Q 004248 166 TNLTSLYLSDNGLTGTIPSSLGQLSVLSVLDLSRNSLTGNIPTSFGLLKNLSSLDISSNYLTGSIPPGLGTLSKLQYLNV 245 (766)
Q Consensus 166 ~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 245 (766)
++|++|+|++|++++ +| ++++++|++|++++|++++. | ++.+++|+.|++++|...+.+ .++.+++|++|++
T Consensus 106 ~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~l 177 (457)
T 3bz5_A 106 TKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDC 177 (457)
T ss_dssp TTCCEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEEC
T ss_pred CcCCEEECCCCcCCe-ec--CCCCCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCccccc--ccccCCcCCEEEC
Confidence 999999999999986 44 88899999999999999873 3 788899999999999766666 4778889999999
Q ss_pred cCCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccCCCCCCCEEEccCccCccccCCCccCCCCcccEEEccCCCCCC
Q 004248 246 SNNSLASSIPAQLGDLDSLVDLDLSMNSLSGSVPSELRGLRSLQKFVIGNNFLSGNLSVNLFPTVSQLQIIVLRQNGFTG 325 (766)
Q Consensus 246 s~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~~~~~~~~~l~~L~~L~L~~N~l~~ 325 (766)
++|++++ +| ++.+++|+.|++++|++++. .++.+++|+.|++++|++++ +| +..+++|+.|++++|++++
T Consensus 178 s~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip---~~~l~~L~~L~l~~N~l~~ 247 (457)
T 3bz5_A 178 SFNKITE-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID---VTPLTQLTYFDCSVNPLTE 247 (457)
T ss_dssp CSSCCCC-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC---CTTCTTCSEEECCSSCCSC
T ss_pred CCCccce-ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC---ccccCCCCEEEeeCCcCCC
Confidence 9999887 45 77888899999999988875 37888889999999998887 55 4678888899999998888
Q ss_pred CCCcccCCCC-------CCCEEEccCCCCCCCCCcccccCCCCCcEEEccCCcCccCCCc-----------CCCCCCEEe
Q 004248 326 PPPDVLWSMP-------QLRLLDISRNNFTGPLPNSRSNVNTSTVELNISQNMFYGGLTP-----------VLGRFRLVD 387 (766)
Q Consensus 326 ~~p~~l~~l~-------~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~L~ls~N~l~g~~~~-----------~l~~l~~ld 387 (766)
.++..+.++. +|+.|++++|++.|.+|. ..+++|+.|++++|.+.|.+|. ..++|+.|+
T Consensus 248 ~~~~~l~~L~~L~l~~n~L~~L~l~~n~~~~~~~~---~~l~~L~~L~Ls~n~~l~~l~~~~~~L~~L~l~~~~~L~~L~ 324 (457)
T 3bz5_A 248 LDVSTLSKLTTLHCIQTDLLEIDLTHNTQLIYFQA---EGCRKIKELDVTHNTQLYLLDCQAAGITELDLSQNPKLVYLY 324 (457)
T ss_dssp CCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEEC---TTCTTCCCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEE
T ss_pred cCHHHCCCCCEEeccCCCCCEEECCCCccCCcccc---cccccCCEEECCCCcccceeccCCCcceEechhhcccCCEEE
Confidence 7766555544 556666666666666652 3456677777777776665552 124567777
Q ss_pred ccCCcCcc
Q 004248 388 LSGNYFEG 395 (766)
Q Consensus 388 Ls~N~l~g 395 (766)
|++|+|+|
T Consensus 325 L~~N~l~~ 332 (457)
T 3bz5_A 325 LNNTELTE 332 (457)
T ss_dssp CTTCCCSC
T ss_pred CCCCcccc
Confidence 77777776
No 286
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.96 E-value=1.2e-28 Score=265.39 Aligned_cols=264 Identities=21% Similarity=0.260 Sum_probs=224.9
Q ss_pred CCEEecCCCCCCCCCchhhhhCCCCCCEEEccCCCCCccCCcccCCCCCCcEEEeecCcCCCCCCccccCCCCCCEEEcc
Q 004248 119 LASFNASRFLLPGSIPDWLGQQLPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPSSLGQLSVLSVLDLS 198 (766)
Q Consensus 119 L~~L~ls~n~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls 198 (766)
++.++++++.+. .+|..+ .++|++|+|++|.+++..+..|+++++|++|+|++|++++..|..|.++++|++|+|+
T Consensus 33 l~~l~~~~~~l~-~lp~~~---~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 108 (330)
T 1xku_A 33 LRVVQCSDLGLE-KVPKDL---PPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLS 108 (330)
T ss_dssp TTEEECTTSCCC-SCCCSC---CTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CeEEEecCCCcc-ccCccC---CCCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECC
Confidence 445555555553 456544 3689999999999999888899999999999999999998889999999999999999
Q ss_pred CCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCCCCCCCccEEEccCCCCCC--CCccccCCCCCCCEEEccCCcCCc
Q 004248 199 RNSLTGNIPTSFGLLKNLSSLDISSNYLTGSIPPGLGTLSKLQYLNVSNNSLAS--SIPAQLGDLDSLVDLDLSMNSLSG 276 (766)
Q Consensus 199 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~--~~p~~l~~l~~L~~L~Ls~N~l~g 276 (766)
+|+++ .+|..+. ++|++|++++|.+++..+..+.++++|++|++++|.+.. ..+..+.++++|++|++++|+++.
T Consensus 109 ~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~ 185 (330)
T 1xku_A 109 KNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT 185 (330)
T ss_dssp SSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS
T ss_pred CCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcccc
Confidence 99998 5676664 799999999999998777779999999999999999964 678889999999999999999985
Q ss_pred cCCcccCCCCCCCEEEccCccCccccCCCccCCCCcccEEEccCCCCCCCCCcccCCCCCCCEEEccCCCCCCCCCcccc
Q 004248 277 SVPSELRGLRSLQKFVIGNNFLSGNLSVNLFPTVSQLQIIVLRQNGFTGPPPDVLWSMPQLRLLDISRNNFTGPLPNSRS 356 (766)
Q Consensus 277 ~~p~~l~~l~~L~~L~ls~N~l~g~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~ 356 (766)
+|..+. ++|++|++++|.+++..+ ..|..+++|+.|+|++|++++.++..+..+++|+.|+|++|+++ .+|...
T Consensus 186 -l~~~~~--~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l- 259 (330)
T 1xku_A 186 -IPQGLP--PSLTELHLDGNKITKVDA-ASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGL- 259 (330)
T ss_dssp -CCSSCC--TTCSEEECTTSCCCEECT-GGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTT-
T ss_pred -CCcccc--ccCCEEECCCCcCCccCH-HHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhh-
Confidence 565554 899999999999987544 45688999999999999999999989999999999999999999 777643
Q ss_pred cCCCCCcEEEccCCcCccCCCcC---------CCCCCEEeccCCcCcc
Q 004248 357 NVNTSTVELNISQNMFYGGLTPV---------LGRFRLVDLSGNYFEG 395 (766)
Q Consensus 357 ~~~~~l~~L~ls~N~l~g~~~~~---------l~~l~~ldLs~N~l~g 395 (766)
..+++|++|++++|.+++..+.. ...++.+++++|.+..
T Consensus 260 ~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~ 307 (330)
T 1xku_A 260 ADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQY 307 (330)
T ss_dssp TTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCG
T ss_pred ccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccc
Confidence 56789999999999998643322 3568899999999863
No 287
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.96 E-value=7.4e-29 Score=267.44 Aligned_cols=263 Identities=21% Similarity=0.250 Sum_probs=227.4
Q ss_pred CCCEEecCCCCCCCCCchhhhhCCCCCCEEEccCCCCCccCCcccCCCCCCcEEEeecCcCCCCCCccccCCCCCCEEEc
Q 004248 118 HLASFNASRFLLPGSIPDWLGQQLPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPSSLGQLSVLSVLDL 197 (766)
Q Consensus 118 ~L~~L~ls~n~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L 197 (766)
+++.++++++.+. .+|..+ .++|++|+|++|.+++..|..|.++++|++|+|++|++++..|..|.++++|++|+|
T Consensus 34 ~l~~l~~~~~~l~-~ip~~~---~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 109 (332)
T 2ft3_A 34 HLRVVQCSDLGLK-AVPKEI---SPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYI 109 (332)
T ss_dssp ETTEEECCSSCCS-SCCSCC---CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEEC
T ss_pred cCCEEECCCCCcc-ccCCCC---CCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEEC
Confidence 4566777777664 677655 468999999999999988889999999999999999999888999999999999999
Q ss_pred cCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCCCCCCCccEEEccCCCCC--CCCccccCCCCCCCEEEccCCcCC
Q 004248 198 SRNSLTGNIPTSFGLLKNLSSLDISSNYLTGSIPPGLGTLSKLQYLNVSNNSLA--SSIPAQLGDLDSLVDLDLSMNSLS 275 (766)
Q Consensus 198 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~--~~~p~~l~~l~~L~~L~Ls~N~l~ 275 (766)
++|+++ .+|..+. ++|++|++++|.+++..+..+.++++|++|++++|.++ +..|..+..+ +|++|++++|+++
T Consensus 110 ~~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~ 185 (332)
T 2ft3_A 110 SKNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLT 185 (332)
T ss_dssp CSSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCS
T ss_pred CCCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCC
Confidence 999998 5776665 89999999999999766667999999999999999996 4778888888 9999999999998
Q ss_pred ccCCcccCCCCCCCEEEccCccCccccCCCccCCCCcccEEEccCCCCCCCCCcccCCCCCCCEEEccCCCCCCCCCccc
Q 004248 276 GSVPSELRGLRSLQKFVIGNNFLSGNLSVNLFPTVSQLQIIVLRQNGFTGPPPDVLWSMPQLRLLDISRNNFTGPLPNSR 355 (766)
Q Consensus 276 g~~p~~l~~l~~L~~L~ls~N~l~g~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~ 355 (766)
+ +|..+. ++|++|++++|.+++..+ ..|..+++|+.|+|++|++++.+|..+..+++|+.|+|++|+++ .+|..
T Consensus 186 ~-l~~~~~--~~L~~L~l~~n~i~~~~~-~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~- 259 (332)
T 2ft3_A 186 G-IPKDLP--ETLNELHLDHNKIQAIEL-EDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAG- 259 (332)
T ss_dssp S-CCSSSC--SSCSCCBCCSSCCCCCCT-TSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTT-
T ss_pred c-cCcccc--CCCCEEECCCCcCCccCH-HHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChh-
Confidence 6 666554 789999999999986544 45688999999999999999999999999999999999999999 78865
Q ss_pred ccCCCCCcEEEccCCcCccCCCcC---------CCCCCEEeccCCcCc
Q 004248 356 SNVNTSTVELNISQNMFYGGLTPV---------LGRFRLVDLSGNYFE 394 (766)
Q Consensus 356 ~~~~~~l~~L~ls~N~l~g~~~~~---------l~~l~~ldLs~N~l~ 394 (766)
...+++|+.|++++|.+++..+.. ...++.|++++|.+.
T Consensus 260 l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~ 307 (332)
T 2ft3_A 260 LPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVP 307 (332)
T ss_dssp GGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSC
T ss_pred hhcCccCCEEECCCCCCCccChhHccccccccccccccceEeecCccc
Confidence 456789999999999998643322 356889999999987
No 288
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=1e-29 Score=270.85 Aligned_cols=265 Identities=23% Similarity=0.232 Sum_probs=209.5
Q ss_pred CCCCEEecCCCCCCCCCchhhhhCCCCCCEEEccCCCCCc--cCCcccCCCCCCcEEEeecCcCCCCCCccccCCCCCCE
Q 004248 117 THLASFNASRFLLPGSIPDWLGQQLPTLQALDLRSCSISG--VIPFSLGNLTNLTSLYLSDNGLTGTIPSSLGQLSVLSV 194 (766)
Q Consensus 117 ~~L~~L~ls~n~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g--~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~ 194 (766)
++|+.|++++|.+. .+|+.....+++|++|+|++|.++. ..|..+..+++|++|+|++|.++ .+|..+.++++|++
T Consensus 28 ~~l~~L~L~~n~l~-~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~ 105 (306)
T 2z66_A 28 SSATRLELESNKLQ-SLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEH 105 (306)
T ss_dssp TTCCEEECCSSCCC-CCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCE
T ss_pred CCCCEEECCCCccC-ccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCCCccc-cChhhcCCCCCCCE
Confidence 57889999998886 6777654558999999999998873 34667778899999999999887 47777888999999
Q ss_pred EEccCCCCCCCCC-cccCCCCCCCEEeccCCcCCCCCCCCCCCCCCccEEEccCCCCCC-CCccccCCCCCCCEEEccCC
Q 004248 195 LDLSRNSLTGNIP-TSFGLLKNLSSLDISSNYLTGSIPPGLGTLSKLQYLNVSNNSLAS-SIPAQLGDLDSLVDLDLSMN 272 (766)
Q Consensus 195 L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~-~~p~~l~~l~~L~~L~Ls~N 272 (766)
|++++|++++..+ ..+..+++|++|++++|.+++..|..+..+++|++|++++|.+++ .+|..+..+++|++|++++|
T Consensus 106 L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n 185 (306)
T 2z66_A 106 LDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQC 185 (306)
T ss_dssp EECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTS
T ss_pred EECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCC
Confidence 9999999886554 578889999999999999988888888889999999999999876 57888889999999999999
Q ss_pred cCCccCCcccCCCCCCCEEEccCccCccccCCCccCCCCcccEEEccCCCCCCCCCcccCCCC-CCCEEEccCCCCCCCC
Q 004248 273 SLSGSVPSELRGLRSLQKFVIGNNFLSGNLSVNLFPTVSQLQIIVLRQNGFTGPPPDVLWSMP-QLRLLDISRNNFTGPL 351 (766)
Q Consensus 273 ~l~g~~p~~l~~l~~L~~L~ls~N~l~g~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~-~L~~L~Ls~N~l~g~~ 351 (766)
++++..|..+..+++|++|++++|.+++. +...|..+++|+.|+|++|++++.+|..+..++ +|++|+|++|++++.-
T Consensus 186 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c 264 (306)
T 2z66_A 186 QLEQLSPTAFNSLSSLQVLNMSHNNFFSL-DTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTC 264 (306)
T ss_dssp CCCEECTTTTTTCTTCCEEECTTSCCSBC-CSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSG
T ss_pred CcCCcCHHHhcCCCCCCEEECCCCccCcc-ChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeeccc
Confidence 99888888899999999999999998754 444467888999999999999998888888885 8999999999988754
Q ss_pred Cccc-ccCCCCCcEEEccCCcCccCCCcCCCCCC
Q 004248 352 PNSR-SNVNTSTVELNISQNMFYGGLTPVLGRFR 384 (766)
Q Consensus 352 p~~~-~~~~~~l~~L~ls~N~l~g~~~~~l~~l~ 384 (766)
+... .........+....+.+.+..|..+....
T Consensus 265 ~~~~~~~~l~~~~~~~~~~~~~~C~~p~~~~g~~ 298 (306)
T 2z66_A 265 EHQSFLQWIKDQRQLLVEVERMECATPSDKQGMP 298 (306)
T ss_dssp GGHHHHHHHHHTGGGBSCGGGCBEEESGGGTTCB
T ss_pred ChHHHHHHHHhhhhhhccccccccCCchhhCCce
Confidence 3111 01111222334455667776676555443
No 289
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.96 E-value=3e-29 Score=290.47 Aligned_cols=318 Identities=19% Similarity=0.221 Sum_probs=238.3
Q ss_pred CEEEEEcCCCCcCCCCCCCCccchhhhccCCCCCEEecCCCCCCCCCchhhhhCCCCCCEEEccCCCCCccCCcccCCCC
Q 004248 87 SVVGINISGFRRTRLGSQNPRFAADALVNLTHLASFNASRFLLPGSIPDWLGQQLPTLQALDLRSCSISGVIPFSLGNLT 166 (766)
Q Consensus 87 ~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~L~ls~n~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~ 166 (766)
+++.+++++..... +.+..+.++++|++|++++|.+.+-.|..+. .+++|++|+|++|.+++..|..|++++
T Consensus 29 ~l~~L~Ls~n~l~~-------~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~-~l~~L~~L~L~~n~l~~~~~~~~~~l~ 100 (570)
T 2z63_A 29 STKNLDLSFNPLRH-------LGSYSFFSFPELQVLDLSRCEIQTIEDGAYQ-SLSHLSTLILTGNPIQSLALGAFSGLS 100 (570)
T ss_dssp SCCEEECCSCCCCE-------ECTTTTTTCSSCCEEECTTCCCCEECTTTTT-TCTTCCEEECTTCCCCEECTTTTTTCT
T ss_pred cccEEEccCCccCc-------cChhHhhCCCCceEEECCCCcCCccCccccc-CchhCCEEeCcCCcCCccCHhhhcCcc
Confidence 57778887754321 2234678999999999999998775555565 499999999999999998889999999
Q ss_pred CCcEEEeecCcCCCCCCccccCCCCCCEEEccCCCCCC-CCCcccCCCCCCCEEeccCCcCCCCCCCCCCCC--------
Q 004248 167 NLTSLYLSDNGLTGTIPSSLGQLSVLSVLDLSRNSLTG-NIPTSFGLLKNLSSLDISSNYLTGSIPPGLGTL-------- 237 (766)
Q Consensus 167 ~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l-------- 237 (766)
+|++|+|++|++++..+..++++++|++|++++|.+++ .+|..|+++++|++|++++|.+++..|..++.+
T Consensus 101 ~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~ 180 (570)
T 2z63_A 101 SLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNL 180 (570)
T ss_dssp TCCEEECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCC
T ss_pred ccccccccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhh
Confidence 99999999999997666679999999999999999987 479999999999999999998875544433333
Q ss_pred --------------------------------------------------------------------------------
Q 004248 238 -------------------------------------------------------------------------------- 237 (766)
Q Consensus 238 -------------------------------------------------------------------------------- 237 (766)
T Consensus 181 ~L~l~~n~l~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~ 260 (570)
T 2z63_A 181 SLDLSLNPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIE 260 (570)
T ss_dssp EEECTTCCCCEECTTTTTTCEEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEE
T ss_pred hcccCCCCceecCHHHhccCcceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchh
Confidence
Q ss_pred ---------------------CCccEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCccCCcc-c-------------
Q 004248 238 ---------------------SKLQYLNVSNNSLASSIPAQLGDLDSLVDLDLSMNSLSGSVPSE-L------------- 282 (766)
Q Consensus 238 ---------------------~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~-l------------- 282 (766)
++|+.|++++|.++ .+|..+..+ +|++|++++|.+. .+|.. +
T Consensus 261 ~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~-~L~~L~l~~n~~~-~l~~~~l~~L~~L~l~~n~~ 337 (570)
T 2z63_A 261 EFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIE-RVKDFSYNF-GWQHLELVNCKFG-QFPTLKLKSLKRLTFTSNKG 337 (570)
T ss_dssp EEEEEETTEEESCSTTTTGGGTTCSEEEEESCEEC-SCCBCCSCC-CCSEEEEESCBCS-SCCBCBCSSCCEEEEESCBS
T ss_pred hhhhhcchhhhhhchhhhcCcCcccEEEecCccch-hhhhhhccC-CccEEeeccCccc-ccCcccccccCEEeCcCCcc
Confidence 33444444444443 234334433 4444444444443 22211 1
Q ss_pred ------CCCCCCCEEEccCccCccccC-CCccCCCCcccEEEccCCCCCCCCCcccCCCCCCCEEEccCCCCCCCCCccc
Q 004248 283 ------RGLRSLQKFVIGNNFLSGNLS-VNLFPTVSQLQIIVLRQNGFTGPPPDVLWSMPQLRLLDISRNNFTGPLPNSR 355 (766)
Q Consensus 283 ------~~l~~L~~L~ls~N~l~g~~~-~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~ 355 (766)
..+++|++|++++|.+++... ...+..+++|+.|++++|.+++.++. +..+++|+.|++++|++++..|...
T Consensus 338 ~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~ 416 (570)
T 2z63_A 338 GNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSV 416 (570)
T ss_dssp CCBCCCCBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCT
T ss_pred ccccccccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhh
Confidence 467889999999999875431 12346789999999999999987666 8999999999999999998877556
Q ss_pred ccCCCCCcEEEccCCcCccCCCc---CCCCCCEEeccCCcCc-cccChhhhh--cc--cCCCcccCCCC
Q 004248 356 SNVNTSTVELNISQNMFYGGLTP---VLGRFRLVDLSGNYFE-GRVPEYVHS--NA--SSLDSNCLQNV 416 (766)
Q Consensus 356 ~~~~~~l~~L~ls~N~l~g~~~~---~l~~l~~ldLs~N~l~-g~~p~~~~~--~~--~~l~~n~l~~~ 416 (766)
+..+++|++|++++|.+.+..|. .+++|+.|+|++|.++ +.+|..+.. ++ -++++|.+.+.
T Consensus 417 ~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~ 485 (570)
T 2z63_A 417 FLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQL 485 (570)
T ss_dssp TTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEE
T ss_pred hhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccC
Confidence 67788999999999999887774 4678999999999998 678866531 11 14556655543
No 290
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.96 E-value=5.8e-30 Score=278.57 Aligned_cols=259 Identities=22% Similarity=0.175 Sum_probs=178.5
Q ss_pred CCCCEEecCCCCCCCCCchhhhhCCCCCCEEEccCCCCCccCCcccCCCCCCcEEEeecCcCCCCCCccccCCCCCCEEE
Q 004248 117 THLASFNASRFLLPGSIPDWLGQQLPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPSSLGQLSVLSVLD 196 (766)
Q Consensus 117 ~~L~~L~ls~n~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~ 196 (766)
++|+.|++++|.+.+-.+..+. .+++|++|+|++|.+++..|..|+++++|++|+|++|++++..+..+.++++|++|+
T Consensus 52 ~~L~~L~l~~n~i~~~~~~~~~-~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 130 (353)
T 2z80_A 52 EAVKSLDLSNNRITYISNSDLQ-RCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLN 130 (353)
T ss_dssp TTCCEEECTTSCCCEECTTTTT-TCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEE
T ss_pred ccCcEEECCCCcCcccCHHHhc-cCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEE
Confidence 4677888888877653333444 478888888888888877777788888888888888888754444577788888888
Q ss_pred ccCCCCCCCCC-cccCCCCCCCEEeccCCc-CCCCCCCCCCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCcC
Q 004248 197 LSRNSLTGNIP-TSFGLLKNLSSLDISSNY-LTGSIPPGLGTLSKLQYLNVSNNSLASSIPAQLGDLDSLVDLDLSMNSL 274 (766)
Q Consensus 197 Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~-l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l 274 (766)
|++|++++..+ ..|.++++|++|++++|. +++..|..+.++++|++|++++|.+++..|..+.++++|++|++++|++
T Consensus 131 L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l 210 (353)
T 2z80_A 131 LLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQH 210 (353)
T ss_dssp CTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCS
T ss_pred CCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCcc
Confidence 88888774333 367778888888888774 5555566777788888888888888777777788888888888888877
Q ss_pred CccCCcccCCCCCCCEEEccCccCccccCCCc--cCCCCcccEEEccCCCCCC----CCCcccCCCCCCCEEEccCCCCC
Q 004248 275 SGSVPSELRGLRSLQKFVIGNNFLSGNLSVNL--FPTVSQLQIIVLRQNGFTG----PPPDVLWSMPQLRLLDISRNNFT 348 (766)
Q Consensus 275 ~g~~p~~l~~l~~L~~L~ls~N~l~g~~~~~~--~~~l~~L~~L~L~~N~l~~----~~p~~l~~l~~L~~L~Ls~N~l~ 348 (766)
....+..+..+++|+.|++++|.+++..+..+ ......++.++|++|.+++ .+|..+..+++|+.||+++|+++
T Consensus 211 ~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~ 290 (353)
T 2z80_A 211 ILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLK 290 (353)
T ss_dssp TTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCC
T ss_pred ccchhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCC
Confidence 54333344557778888888887775433221 1234556667777777665 25666677777777777777776
Q ss_pred CCCCcccccCCCCCcEEEccCCcCccCCCcCCCCCCEEeccCCcCccccC
Q 004248 349 GPLPNSRSNVNTSTVELNISQNMFYGGLTPVLGRFRLVDLSGNYFEGRVP 398 (766)
Q Consensus 349 g~~p~~~~~~~~~l~~L~ls~N~l~g~~~~~l~~l~~ldLs~N~l~g~~p 398 (766)
.+|...+. .+++|+.|+|++|++++..|
T Consensus 291 -~i~~~~~~---------------------~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 291 -SVPDGIFD---------------------RLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp -CCCTTTTT---------------------TCTTCCEEECCSSCBCCCHH
T ss_pred -ccCHHHHh---------------------cCCCCCEEEeeCCCccCcCC
Confidence 45543222 24567777777887777766
No 291
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.96 E-value=8.3e-29 Score=288.57 Aligned_cols=274 Identities=20% Similarity=0.189 Sum_probs=236.4
Q ss_pred hhhhccCCCCCEEecCCCCCCCCCchhhhhCCCCCCEEEccCCCCCccCCcccCCCCCCcEEEeecCcCCCCCCccccCC
Q 004248 110 ADALVNLTHLASFNASRFLLPGSIPDWLGQQLPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPSSLGQL 189 (766)
Q Consensus 110 ~~~l~~l~~L~~L~ls~n~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L 189 (766)
+..+.++++|++|++++|.+.+..|..++. +++|++|+|++|.+++..+..|+++++|++|+|++|.+++..|..|.++
T Consensus 92 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~-l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 170 (597)
T 3oja_B 92 TYAFAYAHTIQKLYMGFNAIRYLPPHVFQN-VPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQAT 170 (597)
T ss_dssp TTTTTTCTTCCEEECCSSCCCCCCTTTTTT-CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTC
T ss_pred hHHhcCCCCCCEEECCCCcCCCCCHHHHcC-CCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcC
Confidence 457889999999999999998866666654 9999999999999998777778999999999999999999889999999
Q ss_pred CCCCEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCCCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEc
Q 004248 190 SVLSVLDLSRNSLTGNIPTSFGLLKNLSSLDISSNYLTGSIPPGLGTLSKLQYLNVSNNSLASSIPAQLGDLDSLVDLDL 269 (766)
Q Consensus 190 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 269 (766)
++|++|+|++|.+++. | ++.+++|+.|++++|.+++ +...++|+.|++++|.++.. |..+ .++|+.|+|
T Consensus 171 ~~L~~L~L~~N~l~~~-~--~~~l~~L~~L~l~~n~l~~-----l~~~~~L~~L~ls~n~l~~~-~~~~--~~~L~~L~L 239 (597)
T 3oja_B 171 TSLQNLQLSSNRLTHV-D--LSLIPSLFHANVSYNLLST-----LAIPIAVEELDASHNSINVV-RGPV--NVELTILKL 239 (597)
T ss_dssp TTCCEEECTTSCCSBC-C--GGGCTTCSEEECCSSCCSE-----EECCTTCSEEECCSSCCCEE-ECSC--CSCCCEEEC
T ss_pred CcCcEEECcCCCCCCc-C--hhhhhhhhhhhcccCcccc-----ccCCchhheeeccCCccccc-cccc--CCCCCEEEC
Confidence 9999999999999875 2 5678999999999999875 33456899999999999754 3332 368999999
Q ss_pred cCCcCCccCCcccCCCCCCCEEEccCccCccccCCCccCCCCcccEEEccCCCCCCCCCcccCCCCCCCEEEccCCCCCC
Q 004248 270 SMNSLSGSVPSELRGLRSLQKFVIGNNFLSGNLSVNLFPTVSQLQIIVLRQNGFTGPPPDVLWSMPQLRLLDISRNNFTG 349 (766)
Q Consensus 270 s~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g 349 (766)
++|.+++ +..+..+++|+.|++++|.+++.+|.. |..+++|+.|+|++|++++. |..+..+++|+.|+|++|+++
T Consensus 240 ~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~-~~~l~~L~~L~Ls~N~l~~l-~~~~~~l~~L~~L~Ls~N~l~- 314 (597)
T 3oja_B 240 QHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHP-FVKMQRLERLYISNNRLVAL-NLYGQPIPTLKVLDLSHNHLL- 314 (597)
T ss_dssp CSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGG-GTTCSSCCEEECTTSCCCEE-ECSSSCCTTCCEEECCSSCCC-
T ss_pred CCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHH-hcCccCCCEEECCCCCCCCC-CcccccCCCCcEEECCCCCCC-
Confidence 9999997 478999999999999999999876654 58899999999999999984 666788999999999999999
Q ss_pred CCCcccccCCCCCcEEEccCCcCccCCCcCCCCCCEEeccCCcCccccChhh
Q 004248 350 PLPNSRSNVNTSTVELNISQNMFYGGLTPVLGRFRLVDLSGNYFEGRVPEYV 401 (766)
Q Consensus 350 ~~p~~~~~~~~~l~~L~ls~N~l~g~~~~~l~~l~~ldLs~N~l~g~~p~~~ 401 (766)
.+|... ..+++|+.|++++|.+.+..+..+++|+.|+|++|++++..+..+
T Consensus 315 ~i~~~~-~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~l~~N~~~~~~~~~~ 365 (597)
T 3oja_B 315 HVERNQ-PQFDRLENLYLDHNSIVTLKLSTHHTLKNLTLSHNDWDCNSLRAL 365 (597)
T ss_dssp CCGGGH-HHHTTCSEEECCSSCCCCCCCCTTCCCSEEECCSSCEEHHHHHHH
T ss_pred ccCccc-ccCCCCCEEECCCCCCCCcChhhcCCCCEEEeeCCCCCChhHHHH
Confidence 566543 567899999999999988766788999999999999998654433
No 292
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.96 E-value=3.7e-29 Score=269.26 Aligned_cols=225 Identities=23% Similarity=0.314 Sum_probs=198.9
Q ss_pred CCCCCEEEccCCCCCccCCcccCCCCCCcEEEeecCcCCCCCCccccCCCCCCEEEccCCCCCCCCCcccCCCCCCCEEe
Q 004248 141 LPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPSSLGQLSVLSVLDLSRNSLTGNIPTSFGLLKNLSSLD 220 (766)
Q Consensus 141 l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 220 (766)
.++++.|+|++|.++ .+|..++++++|++|+|++|.++ .+|..++++++|++|+|++|+++ .+|..|+++++|++|+
T Consensus 80 ~~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~ 156 (328)
T 4fcg_A 80 QPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELS 156 (328)
T ss_dssp STTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEE
T ss_pred ccceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEE
Confidence 688999999999998 78888999999999999999999 89999999999999999999999 7899999999999999
Q ss_pred ccCCcCCCCCCCCCCC---------CCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccCCCCCCCEE
Q 004248 221 ISSNYLTGSIPPGLGT---------LSKLQYLNVSNNSLASSIPAQLGDLDSLVDLDLSMNSLSGSVPSELRGLRSLQKF 291 (766)
Q Consensus 221 Ls~N~l~~~~p~~l~~---------l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L 291 (766)
|++|++.+.+|..++. +++|++|+|++|+++ .+|..++++++|++|+|++|++++ +|..++.+++|++|
T Consensus 157 L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L 234 (328)
T 4fcg_A 157 IRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEEL 234 (328)
T ss_dssp EEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEE
T ss_pred CCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEE
Confidence 9999999999998765 899999999999998 788889999999999999999985 66678999999999
Q ss_pred EccCccCccccCCCccCCCCcccEEEccCCCCCCCCCcccCCCCCCCEEEccCCCCCCCCCcccccCCCCCcEEEccCCc
Q 004248 292 VIGNNFLSGNLSVNLFPTVSQLQIIVLRQNGFTGPPPDVLWSMPQLRLLDISRNNFTGPLPNSRSNVNTSTVELNISQNM 371 (766)
Q Consensus 292 ~ls~N~l~g~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~L~ls~N~ 371 (766)
++++|.+.+.+|.. |..+++|+.|+|++|++.+.+|..+.++++|++|+|++|++.+.+|... ..++++..++++.|.
T Consensus 235 ~Ls~n~~~~~~p~~-~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l-~~L~~L~~l~l~~~~ 312 (328)
T 4fcg_A 235 DLRGCTALRNYPPI-FGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLI-AQLPANCIILVPPHL 312 (328)
T ss_dssp ECTTCTTCCBCCCC-TTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGG-GGSCTTCEEECCGGG
T ss_pred ECcCCcchhhhHHH-hcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHH-hhccCceEEeCCHHH
Confidence 99999998888765 4788899999999999999999889999999999999999999998654 444555555555443
Q ss_pred C
Q 004248 372 F 372 (766)
Q Consensus 372 l 372 (766)
+
T Consensus 313 ~ 313 (328)
T 4fcg_A 313 Q 313 (328)
T ss_dssp S
T ss_pred H
Confidence 3
No 293
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.96 E-value=1.7e-28 Score=275.93 Aligned_cols=261 Identities=21% Similarity=0.188 Sum_probs=224.6
Q ss_pred hhccCCCCCEEecCCCCCCCCCchhhhhCCCCCCEEEccCCCCCccCCcccCCCCCCcEEEeecCcCCCCCCccccCCCC
Q 004248 112 ALVNLTHLASFNASRFLLPGSIPDWLGQQLPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPSSLGQLSV 191 (766)
Q Consensus 112 ~l~~l~~L~~L~ls~n~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~ 191 (766)
.+.++++|+.|++++|.+.+ +| .+.. +++|++|+|++|.+++. | ++++++|++|+|++|++++. | ++++++
T Consensus 37 ~~~~l~~L~~L~Ls~n~l~~-~~-~l~~-l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~ 107 (457)
T 3bz5_A 37 SEEQLATLTSLDCHNSSITD-MT-GIEK-LTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPLTK 107 (457)
T ss_dssp EHHHHTTCCEEECCSSCCCC-CT-TGGG-CTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTCTT
T ss_pred ChhHcCCCCEEEccCCCccc-Ch-hhcc-cCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCCCc
Confidence 56789999999999999986 56 5655 99999999999999985 4 89999999999999999974 4 899999
Q ss_pred CCEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCCCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccC
Q 004248 192 LSVLDLSRNSLTGNIPTSFGLLKNLSSLDISSNYLTGSIPPGLGTLSKLQYLNVSNNSLASSIPAQLGDLDSLVDLDLSM 271 (766)
Q Consensus 192 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~ 271 (766)
|++|++++|++++ +| ++.+++|++|++++|++++ +| ++.+++|++|++++|+..+.+ .++.+++|++|++++
T Consensus 108 L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~-l~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~ 179 (457)
T 3bz5_A 108 LTYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTE-ID--VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSF 179 (457)
T ss_dssp CCEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSC-CC--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCS
T ss_pred CCEEECCCCcCCe-ec--CCCCCcCCEEECCCCccce-ec--cccCCcCCEEECCCCCccccc--ccccCCcCCEEECCC
Confidence 9999999999997 45 8999999999999999997 43 889999999999999777776 488999999999999
Q ss_pred CcCCccCCcccCCCCCCCEEEccCccCccccCCCccCCCCcccEEEccCCCCCCCCCcccCCCCCCCEEEccCCCCCCCC
Q 004248 272 NSLSGSVPSELRGLRSLQKFVIGNNFLSGNLSVNLFPTVSQLQIIVLRQNGFTGPPPDVLWSMPQLRLLDISRNNFTGPL 351 (766)
Q Consensus 272 N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~ 351 (766)
|++++ +| ++.+++|+.|++++|.+++. + +..+++|+.|++++|++++. | +..+++|+.|++++|++++..
T Consensus 180 n~l~~-l~--l~~l~~L~~L~l~~N~l~~~-~---l~~l~~L~~L~Ls~N~l~~i-p--~~~l~~L~~L~l~~N~l~~~~ 249 (457)
T 3bz5_A 180 NKITE-LD--VSQNKLLNRLNCDTNNITKL-D---LNQNIQLTFLDCSSNKLTEI-D--VTPLTQLTYFDCSVNPLTELD 249 (457)
T ss_dssp SCCCC-CC--CTTCTTCCEEECCSSCCSCC-C---CTTCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCCC
T ss_pred Cccce-ec--cccCCCCCEEECcCCcCCee-c---cccCCCCCEEECcCCccccc-C--ccccCCCCEEEeeCCcCCCcC
Confidence 99997 45 88999999999999999874 2 57889999999999999994 5 889999999999999999864
Q ss_pred CcccccCCC-------CCcEEEccCCcCccCCCc-CCCCCCEEeccCCcCccccChh
Q 004248 352 PNSRSNVNT-------STVELNISQNMFYGGLTP-VLGRFRLVDLSGNYFEGRVPEY 400 (766)
Q Consensus 352 p~~~~~~~~-------~l~~L~ls~N~l~g~~~~-~l~~l~~ldLs~N~l~g~~p~~ 400 (766)
+.. ...+. .++.|++++|.+.|.+|. .+++|+.|||++|.+.|.+|..
T Consensus 250 ~~~-l~~L~~L~l~~n~L~~L~l~~n~~~~~~~~~~l~~L~~L~Ls~n~~l~~l~~~ 305 (457)
T 3bz5_A 250 VST-LSKLTTLHCIQTDLLEIDLTHNTQLIYFQAEGCRKIKELDVTHNTQLYLLDCQ 305 (457)
T ss_dssp CTT-CTTCCEEECTTCCCSCCCCTTCTTCCEEECTTCTTCCCCCCTTCTTCCEEECT
T ss_pred HHH-CCCCCEEeccCCCCCEEECCCCccCCcccccccccCCEEECCCCcccceeccC
Confidence 422 22211 456677777777777774 4688999999999999988853
No 294
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.96 E-value=2.6e-29 Score=264.93 Aligned_cols=211 Identities=27% Similarity=0.319 Sum_probs=180.7
Q ss_pred CCCCCEEEccCCCCCccCCcccCCCCCCcEEEeecCcCCCCCCccccCCCCCCEEEccCCC-CCCCCCcccCCCCCCCEE
Q 004248 141 LPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPSSLGQLSVLSVLDLSRNS-LTGNIPTSFGLLKNLSSL 219 (766)
Q Consensus 141 l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L 219 (766)
.++|++|+|++|.+++..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|. ++...|..|..+++|++|
T Consensus 31 ~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L 110 (285)
T 1ozn_A 31 PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTL 110 (285)
T ss_dssp CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEE
T ss_pred CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEE
Confidence 4578899999999988888888999999999999999988778889999999999999997 776668888999999999
Q ss_pred eccCCcCCCCCCCCCCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccCCCCCCCEEEccCccCc
Q 004248 220 DISSNYLTGSIPPGLGTLSKLQYLNVSNNSLASSIPAQLGDLDSLVDLDLSMNSLSGSVPSELRGLRSLQKFVIGNNFLS 299 (766)
Q Consensus 220 ~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~ 299 (766)
+|++|.+++..|..+.++++|++|++++|++++..+..++++++|++|+|++|++++..+..+.++++|+.|++++|.++
T Consensus 111 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 190 (285)
T 1ozn_A 111 HLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVA 190 (285)
T ss_dssp ECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCC
T ss_pred ECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCccc
Confidence 99999998877888889999999999999998777777888999999999999998777777888889999999998888
Q ss_pred cccCCCccCCCCcccEEEccCCCCCCCCCcccCCCCCCCEEEccCCCCCCCCC
Q 004248 300 GNLSVNLFPTVSQLQIIVLRQNGFTGPPPDVLWSMPQLRLLDISRNNFTGPLP 352 (766)
Q Consensus 300 g~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p 352 (766)
+..|. .|..+++|+.|++++|++++.++..+..+++|+.|++++|+++...+
T Consensus 191 ~~~~~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~ 242 (285)
T 1ozn_A 191 HVHPH-AFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCR 242 (285)
T ss_dssp EECTT-TTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGG
T ss_pred ccCHh-HccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCC
Confidence 66554 35778888889999998888888888888999999999988876544
No 295
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.96 E-value=9.1e-28 Score=260.33 Aligned_cols=282 Identities=22% Similarity=0.326 Sum_probs=234.7
Q ss_pred CCEEEEEcCCCCcCCCCCCCCccchhhhccCCCCCEEecCCCCCCCCCchhhhhCCCCCCEEEccCCCCCccCCcccCCC
Q 004248 86 GSVVGINISGFRRTRLGSQNPRFAADALVNLTHLASFNASRFLLPGSIPDWLGQQLPTLQALDLRSCSISGVIPFSLGNL 165 (766)
Q Consensus 86 ~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~L~ls~n~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l 165 (766)
..++.+++++..... + ..+..+++|++|++++|.+.+ +|+ +. .+++|++|+|++|.+++. | .+.++
T Consensus 44 ~~L~~L~l~~~~i~~---~------~~~~~~~~L~~L~l~~n~i~~-~~~-~~-~l~~L~~L~L~~n~i~~~-~-~~~~l 109 (347)
T 4fmz_A 44 ESITKLVVAGEKVAS---I------QGIEYLTNLEYLNLNGNQITD-ISP-LS-NLVKLTNLYIGTNKITDI-S-ALQNL 109 (347)
T ss_dssp TTCSEEECCSSCCCC---C------TTGGGCTTCCEEECCSSCCCC-CGG-GT-TCTTCCEEECCSSCCCCC-G-GGTTC
T ss_pred ccccEEEEeCCcccc---c------hhhhhcCCccEEEccCCcccc-chh-hh-cCCcCCEEEccCCcccCc-h-HHcCC
Confidence 356778887644321 1 247789999999999998864 555 54 499999999999999863 3 69999
Q ss_pred CCCcEEEeecCcCCCCCCccccCCCCCCEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCCCCCCCccEEEc
Q 004248 166 TNLTSLYLSDNGLTGTIPSSLGQLSVLSVLDLSRNSLTGNIPTSFGLLKNLSSLDISSNYLTGSIPPGLGTLSKLQYLNV 245 (766)
Q Consensus 166 ~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 245 (766)
++|++|+|++|.+++ +|. +.++++|++|++++|.....++ .+..+++|++|++++|.+.+..+ +..+++|++|++
T Consensus 110 ~~L~~L~l~~n~i~~-~~~-~~~l~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l 184 (347)
T 4fmz_A 110 TNLRELYLNEDNISD-ISP-LANLTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSL 184 (347)
T ss_dssp TTCSEEECTTSCCCC-CGG-GTTCTTCCEEECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEEC
T ss_pred CcCCEEECcCCcccC-chh-hccCCceeEEECCCCCCccccc-chhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEc
Confidence 999999999999985 444 8899999999999997665544 48999999999999999985433 889999999999
Q ss_pred cCCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccCCCCCCCEEEccCccCccccCCCccCCCCcccEEEccCCCCCC
Q 004248 246 SNNSLASSIPAQLGDLDSLVDLDLSMNSLSGSVPSELRGLRSLQKFVIGNNFLSGNLSVNLFPTVSQLQIIVLRQNGFTG 325 (766)
Q Consensus 246 s~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~~~~~~~~~l~~L~~L~L~~N~l~~ 325 (766)
++|.+.+..+ +..+++|+.|++++|.+++..+ +..+++|++|++++|.+++..+ +..+++|+.|++++|.+++
T Consensus 185 ~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~---~~~l~~L~~L~l~~n~l~~ 257 (347)
T 4fmz_A 185 NYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP---LANLSQLTWLEIGTNQISD 257 (347)
T ss_dssp TTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG---GTTCTTCCEEECCSSCCCC
T ss_pred cCCccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc---hhcCCCCCEEECCCCccCC
Confidence 9999986443 8889999999999999987655 8899999999999999986443 6788999999999999987
Q ss_pred CCCcccCCCCCCCEEEccCCCCCCCCCcccccCCCCCcEEEccCCcCccCCCc---CCCCCCEEeccCCcCccccC
Q 004248 326 PPPDVLWSMPQLRLLDISRNNFTGPLPNSRSNVNTSTVELNISQNMFYGGLTP---VLGRFRLVDLSGNYFEGRVP 398 (766)
Q Consensus 326 ~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~L~ls~N~l~g~~~~---~l~~l~~ldLs~N~l~g~~p 398 (766)
. +.+..+++|++|++++|++++. | .....++|+.|++++|.+.+..|. .+++|+.|+|++|++++..|
T Consensus 258 ~--~~~~~l~~L~~L~l~~n~l~~~-~--~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~ 328 (347)
T 4fmz_A 258 I--NAVKDLTKLKMLNVGSNQISDI-S--VLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP 328 (347)
T ss_dssp C--GGGTTCTTCCEEECCSSCCCCC-G--GGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG
T ss_pred C--hhHhcCCCcCEEEccCCccCCC-h--hhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC
Confidence 5 5688999999999999999864 4 245678999999999999876653 57899999999999998777
No 296
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.96 E-value=2.4e-30 Score=276.63 Aligned_cols=248 Identities=20% Similarity=0.194 Sum_probs=189.6
Q ss_pred hccCCCCCEEecCCCCCCCCCchhhhhCCCCCCEEEccCCCC-CccCCcccC-------CCCCCcEEEeecCcCCCCCCc
Q 004248 113 LVNLTHLASFNASRFLLPGSIPDWLGQQLPTLQALDLRSCSI-SGVIPFSLG-------NLTNLTSLYLSDNGLTGTIPS 184 (766)
Q Consensus 113 l~~l~~L~~L~ls~n~l~g~ip~~~~~~l~~L~~L~Ls~N~l-~g~~p~~l~-------~l~~L~~L~Ls~N~l~~~~p~ 184 (766)
....++|+.|++++|.+ .+|..+.. . |+.|+|++|.+ .+.+|..+. ++++|++|+|++|++++.+|.
T Consensus 39 ~~~~~~L~~l~l~~n~l--~~p~~~~~-~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 113 (312)
T 1wwl_A 39 YGGGRSLEYLLKRVDTE--ADLGQFTD-I--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPP 113 (312)
T ss_dssp EEEEEECTTHHHHCCTT--CCCHHHHH-H--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCC
T ss_pred EccCCCceeEeeccccc--ccHHHHHH-H--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHH
Confidence 45667788899999998 88988766 2 88999999999 466777666 789999999999999988998
Q ss_pred cc--cCCCCCCEEEccCCCCCCCCCcccCCC-----CCCCEEeccCCcCCCCCCCCCCCCCCccEEEccCCCCCCC--Cc
Q 004248 185 SL--GQLSVLSVLDLSRNSLTGNIPTSFGLL-----KNLSSLDISSNYLTGSIPPGLGTLSKLQYLNVSNNSLASS--IP 255 (766)
Q Consensus 185 ~l--~~L~~L~~L~Ls~N~l~~~~p~~~~~l-----~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~--~p 255 (766)
.+ ..+++|++|+|++|++++. |..++.+ ++|++|+|++|++++..|..++++++|++|+|++|++.+. +|
T Consensus 114 ~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 192 (312)
T 1wwl_A 114 PLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLI 192 (312)
T ss_dssp CSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHH
T ss_pred HHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHH
Confidence 76 8999999999999999977 8877776 8999999999999888778899999999999999988765 33
Q ss_pred ccc--CCCCCCCEEEccCCcCCc--cCC-cccCCCCCCCEEEccCccCccccCCCccCCCCcccEEEccCCCCCCCCCcc
Q 004248 256 AQL--GDLDSLVDLDLSMNSLSG--SVP-SELRGLRSLQKFVIGNNFLSGNLSVNLFPTVSQLQIIVLRQNGFTGPPPDV 330 (766)
Q Consensus 256 ~~l--~~l~~L~~L~Ls~N~l~g--~~p-~~l~~l~~L~~L~ls~N~l~g~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~ 330 (766)
..+ +++++|++|+|++|++++ .++ ..+.++++|++|++++|.+++.+|...+..+++|+.|+|++|+++ .+|..
T Consensus 193 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~ 271 (312)
T 1wwl_A 193 SALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKG 271 (312)
T ss_dssp HHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSS
T ss_pred HHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhh
Confidence 444 788899999999998873 222 334577888888888888877665555566777777777777777 45555
Q ss_pred cCCCCCCCEEEccCCCCCCCCCcccccCCCCCcEEEccCCcC
Q 004248 331 LWSMPQLRLLDISRNNFTGPLPNSRSNVNTSTVELNISQNMF 372 (766)
Q Consensus 331 l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~L~ls~N~l 372 (766)
+. ++|++|||++|++++. |. ...+++|++|++++|.+
T Consensus 272 ~~--~~L~~L~Ls~N~l~~~-p~--~~~l~~L~~L~L~~N~l 308 (312)
T 1wwl_A 272 LP--AKLSVLDLSYNRLDRN-PS--PDELPQVGNLSLKGNPF 308 (312)
T ss_dssp CC--SEEEEEECCSSCCCSC-CC--TTTSCEEEEEECTTCTT
T ss_pred cc--CCceEEECCCCCCCCC-hh--HhhCCCCCEEeccCCCC
Confidence 54 6777777777777754 43 23333444444444433
No 297
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.96 E-value=6e-28 Score=272.79 Aligned_cols=261 Identities=28% Similarity=0.347 Sum_probs=119.3
Q ss_pred hccCCCCCEEecCCCCCCCCCchhhhhCCCCCCEEEccCCCCCccCCcccCCCCCCcEEEeecCcCCCCCCccccCCCCC
Q 004248 113 LVNLTHLASFNASRFLLPGSIPDWLGQQLPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPSSLGQLSVL 192 (766)
Q Consensus 113 l~~l~~L~~L~ls~n~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L 192 (766)
+..+++|++|++++|.+.+ +|+ +. .+++|++|+|++|.+++..| ++++++|++|+|++|.+++. |. +.++++|
T Consensus 64 ~~~l~~L~~L~Ls~n~l~~-~~~-~~-~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~-~~-~~~l~~L 136 (466)
T 1o6v_A 64 VEYLNNLTQINFSNNQLTD-ITP-LK-NLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDI-DP-LKNLTNL 136 (466)
T ss_dssp GGGCTTCCEEECCSSCCCC-CGG-GT-TCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC-GG-GTTCTTC
T ss_pred hhhhcCCCEEECCCCccCC-chh-hh-ccccCCEEECCCCccccChh--hcCCCCCCEEECCCCCCCCC-hH-HcCCCCC
Confidence 3445555555555555443 222 32 25555555555555554333 55555555555555555432 22 4555555
Q ss_pred CEEEccCCCCCCCCCc--------------------ccCCCCCCCEEeccCCcCCCCCCCCCCCCCCccEEEccCCCCCC
Q 004248 193 SVLDLSRNSLTGNIPT--------------------SFGLLKNLSSLDISSNYLTGSIPPGLGTLSKLQYLNVSNNSLAS 252 (766)
Q Consensus 193 ~~L~Ls~N~l~~~~p~--------------------~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 252 (766)
++|++++|.+++ +|. .+.++++|+.|++++|.+++. ..+..+++|++|++++|.+++
T Consensus 137 ~~L~l~~n~l~~-~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~ 213 (466)
T 1o6v_A 137 NRLELSSNTISD-ISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISD 213 (466)
T ss_dssp SEEEEEEEEECC-CGGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCC
T ss_pred CEEECCCCccCC-ChhhccCCcccEeecCCcccCchhhccCCCCCEEECcCCcCCCC--hhhccCCCCCEEEecCCcccc
Confidence 555555555443 221 144444455555555544422 124444455555555555444
Q ss_pred CCccccCCCCCCCEEEccCCcCCccCCcccCCCCCCCEEEccCccCccccCCCccCCCCcccEEEccCCCCCCCCCcccC
Q 004248 253 SIPAQLGDLDSLVDLDLSMNSLSGSVPSELRGLRSLQKFVIGNNFLSGNLSVNLFPTVSQLQIIVLRQNGFTGPPPDVLW 332 (766)
Q Consensus 253 ~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~ 332 (766)
..| ++.+++|++|++++|++++. ..+..+++|+.|++++|.+++..+ +..+++|+.|++++|++++.++ +.
T Consensus 214 ~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~---~~~l~~L~~L~l~~n~l~~~~~--~~ 284 (466)
T 1o6v_A 214 ITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP---LSGLTKLTELKLGANQISNISP--LA 284 (466)
T ss_dssp CGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG---GTTCTTCSEEECCSSCCCCCGG--GT
T ss_pred ccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh---hhcCCCCCEEECCCCccCcccc--cc
Confidence 333 33444455555555444432 234444455555555554443322 3444445555555555444333 44
Q ss_pred CCCCCCEEEccCCCCCCCCCcccccCCCCCcEEEccCCcCccCCC-cCCCCCCEEeccCCcCcc
Q 004248 333 SMPQLRLLDISRNNFTGPLPNSRSNVNTSTVELNISQNMFYGGLT-PVLGRFRLVDLSGNYFEG 395 (766)
Q Consensus 333 ~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~L~ls~N~l~g~~~-~~l~~l~~ldLs~N~l~g 395 (766)
.+++|+.|++++|++++..| ...+++|+.|++++|.+.+..| ..+++|+.|++++|++++
T Consensus 285 ~l~~L~~L~L~~n~l~~~~~---~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~l~~n~l~~ 345 (466)
T 1o6v_A 285 GLTALTNLELNENQLEDISP---ISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSD 345 (466)
T ss_dssp TCTTCSEEECCSSCCSCCGG---GGGCTTCSEEECCSSCCSCCGGGGGCTTCCEEECCSSCCCC
T ss_pred CCCccCeEEcCCCcccCchh---hcCCCCCCEEECcCCcCCCchhhccCccCCEeECCCCccCC
Confidence 44455555555555443322 2233444455555554444332 233444445555554444
No 298
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.96 E-value=6e-28 Score=272.79 Aligned_cols=281 Identities=28% Similarity=0.376 Sum_probs=230.6
Q ss_pred CEEEEEcCCCCcCCCCCCCCccchhhhccCCCCCEEecCCCCCCCCCchhhhhCCCCCCEEEccCCCCCccCCcccCCCC
Q 004248 87 SVVGINISGFRRTRLGSQNPRFAADALVNLTHLASFNASRFLLPGSIPDWLGQQLPTLQALDLRSCSISGVIPFSLGNLT 166 (766)
Q Consensus 87 ~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~L~ls~n~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~ 166 (766)
+++.+++++..... + . .+.++++|++|++++|.+.+..| +. .+++|++|+|++|.+++..+ +.+++
T Consensus 69 ~L~~L~Ls~n~l~~---~----~--~~~~l~~L~~L~l~~n~l~~~~~--~~-~l~~L~~L~L~~n~l~~~~~--~~~l~ 134 (466)
T 1o6v_A 69 NLTQINFSNNQLTD---I----T--PLKNLTKLVDILMNNNQIADITP--LA-NLTNLTGLTLFNNQITDIDP--LKNLT 134 (466)
T ss_dssp TCCEEECCSSCCCC---C----G--GGTTCTTCCEEECCSSCCCCCGG--GT-TCTTCCEEECCSSCCCCCGG--GTTCT
T ss_pred CCCEEECCCCccCC---c----h--hhhccccCCEEECCCCccccChh--hc-CCCCCCEEECCCCCCCCChH--HcCCC
Confidence 56777777654321 1 1 26788888888888888865443 54 48888888888888886543 78888
Q ss_pred CCcEEEeecCcCCCCCC--------------------ccccCCCCCCEEEccCCCCCCCCCcccCCCCCCCEEeccCCcC
Q 004248 167 NLTSLYLSDNGLTGTIP--------------------SSLGQLSVLSVLDLSRNSLTGNIPTSFGLLKNLSSLDISSNYL 226 (766)
Q Consensus 167 ~L~~L~Ls~N~l~~~~p--------------------~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 226 (766)
+|++|+|++|.+++. | ..+.++++|++|++++|.+++. ..+..+++|++|++++|.+
T Consensus 135 ~L~~L~l~~n~l~~~-~~~~~l~~L~~L~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l 211 (466)
T 1o6v_A 135 NLNRLELSSNTISDI-SALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQI 211 (466)
T ss_dssp TCSEEEEEEEEECCC-GGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCC
T ss_pred CCCEEECCCCccCCC-hhhccCCcccEeecCCcccCchhhccCCCCCEEECcCCcCCCC--hhhccCCCCCEEEecCCcc
Confidence 888888888887642 2 2367788999999999999864 3588999999999999999
Q ss_pred CCCCCCCCCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccCCCCCCCEEEccCccCccccCCCc
Q 004248 227 TGSIPPGLGTLSKLQYLNVSNNSLASSIPAQLGDLDSLVDLDLSMNSLSGSVPSELRGLRSLQKFVIGNNFLSGNLSVNL 306 (766)
Q Consensus 227 ~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~~~~~~ 306 (766)
++..| ++.+++|++|++++|++++. ..+..+++|++|++++|++++..| +..+++|+.|++++|.+++..+
T Consensus 212 ~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--- 282 (466)
T 1o6v_A 212 SDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--- 282 (466)
T ss_dssp CCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG---
T ss_pred ccccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc---
Confidence 97655 77899999999999999864 468899999999999999997665 8899999999999999987544
Q ss_pred cCCCCcccEEEccCCCCCCCCCcccCCCCCCCEEEccCCCCCCCCCcccccCCCCCcEEEccCCcCccCCC-cCCCCCCE
Q 004248 307 FPTVSQLQIIVLRQNGFTGPPPDVLWSMPQLRLLDISRNNFTGPLPNSRSNVNTSTVELNISQNMFYGGLT-PVLGRFRL 385 (766)
Q Consensus 307 ~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~L~ls~N~l~g~~~-~~l~~l~~ 385 (766)
+..+++|+.|++++|++++.+| +..+++|+.|++++|++++..| ...+++|+.|++++|.+.+... ..+++|+.
T Consensus 283 ~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~---~~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~ 357 (466)
T 1o6v_A 283 LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP---VSSLTKLQRLFFYNNKVSDVSSLANLTNINW 357 (466)
T ss_dssp GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG---GGGCTTCCEEECCSSCCCCCGGGTTCTTCCE
T ss_pred ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh---hccCccCCEeECCCCccCCchhhccCCCCCE
Confidence 5789999999999999998766 7899999999999999998766 3567899999999999987521 35789999
Q ss_pred EeccCCcCccccC
Q 004248 386 VDLSGNYFEGRVP 398 (766)
Q Consensus 386 ldLs~N~l~g~~p 398 (766)
|++++|++++..|
T Consensus 358 L~l~~n~l~~~~~ 370 (466)
T 1o6v_A 358 LSAGHNQISDLTP 370 (466)
T ss_dssp EECCSSCCCBCGG
T ss_pred EeCCCCccCccch
Confidence 9999999999887
No 299
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.96 E-value=6e-28 Score=266.31 Aligned_cols=276 Identities=20% Similarity=0.185 Sum_probs=229.8
Q ss_pred hhhhccCCCCCEEecCCCCCCCCCchhhhhCCCCCCEEEccCCCCCccCCcccCCCCCCcEEEeecCcCCCCCCccccCC
Q 004248 110 ADALVNLTHLASFNASRFLLPGSIPDWLGQQLPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPSSLGQL 189 (766)
Q Consensus 110 ~~~l~~l~~L~~L~ls~n~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L 189 (766)
...+.++++|+.|++++|.+.+..|..+.. +++|++|+|++|.+++..|..|+++++|++|+|++|+++...+..|.++
T Consensus 62 ~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~-l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l 140 (390)
T 3o6n_A 62 AALLDSFRQVELLNLNDLQIEEIDTYAFAY-AHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNT 140 (390)
T ss_dssp THHHHHCCCCSEEECTTSCCCEECTTTTTT-CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTC
T ss_pred hhHhcccccCcEEECCCCcccccChhhccC-CCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCC
Confidence 345788999999999999987655556654 9999999999999999989999999999999999999995544557999
Q ss_pred CCCCEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCCCCCCC-------------------ccEEEccCCCC
Q 004248 190 SVLSVLDLSRNSLTGNIPTSFGLLKNLSSLDISSNYLTGSIPPGLGTLSK-------------------LQYLNVSNNSL 250 (766)
Q Consensus 190 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~-------------------L~~L~Ls~N~l 250 (766)
++|++|++++|++++..|..|..+++|+.|++++|.+++.- +..+++ |++|++++|.+
T Consensus 141 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~---~~~l~~L~~L~l~~n~l~~~~~~~~L~~L~l~~n~l 217 (390)
T 3o6n_A 141 PKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSI 217 (390)
T ss_dssp TTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCC---GGGCTTCSEEECCSSCCSEEECCSSCSEEECCSSCC
T ss_pred CCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCccc---cccccccceeecccccccccCCCCcceEEECCCCee
Confidence 99999999999999888889999999999999999998642 333444 45555555555
Q ss_pred CCCCccccCCCCCCCEEEccCCcCCccCCcccCCCCCCCEEEccCccCccccCCCccCCCCcccEEEccCCCCCCCCCcc
Q 004248 251 ASSIPAQLGDLDSLVDLDLSMNSLSGSVPSELRGLRSLQKFVIGNNFLSGNLSVNLFPTVSQLQIIVLRQNGFTGPPPDV 330 (766)
Q Consensus 251 ~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~ 330 (766)
+.. |.. ..++|+.|++++|++++. ..+..+++|++|++++|.+++..|. .|..+++|+.|+|++|++++. |..
T Consensus 218 ~~~-~~~--~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~-~~~~l~~L~~L~L~~n~l~~~-~~~ 290 (390)
T 3o6n_A 218 NVV-RGP--VNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYH-PFVKMQRLERLYISNNRLVAL-NLY 290 (390)
T ss_dssp CEE-ECC--CCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESG-GGTTCSSCCEEECCSSCCCEE-ECS
T ss_pred eec-ccc--ccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChh-HccccccCCEEECCCCcCccc-Ccc
Confidence 432 322 347899999999999874 5789999999999999999976554 458899999999999999874 556
Q ss_pred cCCCCCCCEEEccCCCCCCCCCcccccCCCCCcEEEccCCcCccCCCcCCCCCCEEeccCCcCccccC
Q 004248 331 LWSMPQLRLLDISRNNFTGPLPNSRSNVNTSTVELNISQNMFYGGLTPVLGRFRLVDLSGNYFEGRVP 398 (766)
Q Consensus 331 l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~L~ls~N~l~g~~~~~l~~l~~ldLs~N~l~g~~p 398 (766)
+..+++|++|+|++|+++ .+|.. ...+++|+.|++++|.+...-...+++|+.|++++|++++.-.
T Consensus 291 ~~~l~~L~~L~L~~n~l~-~~~~~-~~~l~~L~~L~L~~N~i~~~~~~~~~~L~~L~l~~N~~~~~~~ 356 (390)
T 3o6n_A 291 GQPIPTLKVLDLSHNHLL-HVERN-QPQFDRLENLYLDHNSIVTLKLSTHHTLKNLTLSHNDWDCNSL 356 (390)
T ss_dssp SSCCTTCCEEECCSSCCC-CCGGG-HHHHTTCSEEECCSSCCCCCCCCTTCCCSEEECCSSCEEHHHH
T ss_pred cCCCCCCCEEECCCCcce-ecCcc-ccccCcCCEEECCCCccceeCchhhccCCEEEcCCCCccchhH
Confidence 688999999999999998 45543 3456899999999999987666678999999999999987543
No 300
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.96 E-value=1.5e-30 Score=299.74 Aligned_cols=181 Identities=15% Similarity=0.040 Sum_probs=129.2
Q ss_pred eeecCCcceEEEEE-EcCCcEEEEEEeecccc-----------CHHHHHHHHHHHhhc-CCCCcccceeEEEecCCcEEE
Q 004248 541 LIKNGHSGDLFRGI-LEGGIPVVIKRIDLQSV-----------KTEAYLLELDFFSKV-SHARLVPLLGHCMERENEKFL 607 (766)
Q Consensus 541 ~ig~G~~g~Vy~~~-~~~g~~vavK~l~~~~~-----------~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~~l 607 (766)
..+.|+.|.+++++ .-.|+.+|||.+..... ..++|.+|+++|+++ .|+||+++++++.+ +++.||
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed-~~~~yL 319 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGEN-AQSGWL 319 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEEC-SSEEEE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEE-CCEEEE
Confidence 45677777777765 45689999999965321 135799999999999 79999999997755 678999
Q ss_pred EEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhh
Q 004248 608 VYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEV 687 (766)
Q Consensus 608 V~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a 687 (766)
||||++||+|.++|.+.+. ++.. +|+.||+.||+|+|++ +||||||||+|||+++++++||+|||+|
T Consensus 320 VMEyv~G~~L~d~i~~~~~-------l~~~---~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DFGlA 386 (569)
T 4azs_A 320 VMEKLPGRLLSDMLAAGEE-------IDRE---KILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDFGSI 386 (569)
T ss_dssp EEECCCSEEHHHHHHTTCC-------CCHH---HHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCCTTE
T ss_pred EEecCCCCcHHHHHHhCCC-------CCHH---HHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeecccC
Confidence 9999999999999976543 5553 5899999999999998 9999999999999999999999999999
Q ss_pred hhcCC---CCccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCC
Q 004248 688 CAQGG---DAHQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHL 745 (766)
Q Consensus 688 ~~~~~---~~~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p 745 (766)
+.... ...+.+||+.|+|||.+.+. +..++|+||+|++++++.+|..|
T Consensus 387 r~~~~~~~~~~t~vGTp~YmAPE~l~g~----------~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 387 VTTPQDCSWPTNLVQSFFVFVNELFAEN----------KSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp ESCC---CCSHHHHHHHHHHHHHHC---------------------------CCCCTTHHH
T ss_pred eeCCCCCccccCceechhhccHHHhCCC----------CCCcccccccccchhhhccccch
Confidence 87633 34556899999999987542 34678999999999888776544
No 301
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.96 E-value=1.5e-30 Score=278.23 Aligned_cols=245 Identities=22% Similarity=0.192 Sum_probs=214.4
Q ss_pred CCCCCEEEccCCCCCccCCcccCCCCCCcEEEeecCcC-CCCCCcccc-------CCCCCCEEEccCCCCCCCCCccc--
Q 004248 141 LPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGL-TGTIPSSLG-------QLSVLSVLDLSRNSLTGNIPTSF-- 210 (766)
Q Consensus 141 l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l-~~~~p~~l~-------~L~~L~~L~Ls~N~l~~~~p~~~-- 210 (766)
.++|++|++++|.+ .+|..+... |+.|+|++|.+ .+.+|..+. ++++|++|+|++|++++.+|..+
T Consensus 42 ~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 117 (312)
T 1wwl_A 42 GRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLE 117 (312)
T ss_dssp EEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSSS
T ss_pred CCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHHH
Confidence 67899999999999 778777654 99999999999 456787776 89999999999999999999987
Q ss_pred CCCCCCCEEeccCCcCCCCCCCCCCCC-----CCccEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCcc--CCccc-
Q 004248 211 GLLKNLSSLDISSNYLTGSIPPGLGTL-----SKLQYLNVSNNSLASSIPAQLGDLDSLVDLDLSMNSLSGS--VPSEL- 282 (766)
Q Consensus 211 ~~l~~L~~L~Ls~N~l~~~~p~~l~~l-----~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~--~p~~l- 282 (766)
..+++|++|+|++|++++. |..++.+ ++|++|+|++|++++..|..++++++|++|+|++|++.+. +|..+
T Consensus 118 ~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~ 196 (312)
T 1wwl_A 118 ATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALC 196 (312)
T ss_dssp CCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSC
T ss_pred hcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHH
Confidence 8999999999999999987 8877777 9999999999999998889999999999999999999876 34455
Q ss_pred -CCCCCCCEEEccCccCcc--ccCCCccCCCCcccEEEccCCCCCCCCC-cccCCCCCCCEEEccCCCCCCCCCcccccC
Q 004248 283 -RGLRSLQKFVIGNNFLSG--NLSVNLFPTVSQLQIIVLRQNGFTGPPP-DVLWSMPQLRLLDISRNNFTGPLPNSRSNV 358 (766)
Q Consensus 283 -~~l~~L~~L~ls~N~l~g--~~~~~~~~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~ 358 (766)
.++++|++|++++|.+++ .++..++..+++|+.|+|++|++++.+| ..+..+++|++|+|++|+++ .+|....
T Consensus 197 ~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~-- 273 (312)
T 1wwl_A 197 PLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP-- 273 (312)
T ss_dssp TTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC--
T ss_pred hccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc--
Confidence 899999999999999983 4455556678999999999999999885 56777899999999999999 7886543
Q ss_pred CCCCcEEEccCCcCccCCC--cCCCCCCEEeccCCcCcc
Q 004248 359 NTSTVELNISQNMFYGGLT--PVLGRFRLVDLSGNYFEG 395 (766)
Q Consensus 359 ~~~l~~L~ls~N~l~g~~~--~~l~~l~~ldLs~N~l~g 395 (766)
.+|+.|++++|.+++. | ..+++|+.|+|++|++++
T Consensus 274 -~~L~~L~Ls~N~l~~~-p~~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 274 -AKLSVLDLSYNRLDRN-PSPDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp -SEEEEEECCSSCCCSC-CCTTTSCEEEEEECTTCTTTC
T ss_pred -CCceEEECCCCCCCCC-hhHhhCCCCCEEeccCCCCCC
Confidence 7899999999999875 4 356788999999999986
No 302
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.96 E-value=9.6e-28 Score=260.14 Aligned_cols=280 Identities=24% Similarity=0.322 Sum_probs=235.0
Q ss_pred CCEEEEEcCCCCcCCCCCCCCccchhhhccCCCCCEEecCCCCCCCCCchhhhhCCCCCCEEEccCCCCCccCCcccCCC
Q 004248 86 GSVVGINISGFRRTRLGSQNPRFAADALVNLTHLASFNASRFLLPGSIPDWLGQQLPTLQALDLRSCSISGVIPFSLGNL 165 (766)
Q Consensus 86 ~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~L~ls~n~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l 165 (766)
.++..+++++..... + ..+.++++|++|++++|.+.+ +| .+. .+++|++|+|++|.+++..+ +..+
T Consensus 66 ~~L~~L~l~~n~i~~---~------~~~~~l~~L~~L~L~~n~i~~-~~-~~~-~l~~L~~L~l~~n~i~~~~~--~~~l 131 (347)
T 4fmz_A 66 TNLEYLNLNGNQITD---I------SPLSNLVKLTNLYIGTNKITD-IS-ALQ-NLTNLRELYLNEDNISDISP--LANL 131 (347)
T ss_dssp TTCCEEECCSSCCCC---C------GGGTTCTTCCEEECCSSCCCC-CG-GGT-TCTTCSEEECTTSCCCCCGG--GTTC
T ss_pred CCccEEEccCCcccc---c------hhhhcCCcCCEEEccCCcccC-ch-HHc-CCCcCCEEECcCCcccCchh--hccC
Confidence 357788888754321 1 127899999999999998865 55 454 49999999999999987544 8999
Q ss_pred CCCcEEEeecCcCCCCCCccccCCCCCCEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCCCCCCCccEEEc
Q 004248 166 TNLTSLYLSDNGLTGTIPSSLGQLSVLSVLDLSRNSLTGNIPTSFGLLKNLSSLDISSNYLTGSIPPGLGTLSKLQYLNV 245 (766)
Q Consensus 166 ~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 245 (766)
++|++|++++|.....++ .+..+++|++|++++|.+.+..+ +..+++|+.|++++|.+++. +. +..+++|+.|++
T Consensus 132 ~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~-~~-~~~l~~L~~L~l 206 (347)
T 4fmz_A 132 TKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDI-SP-LASLTSLHYFTA 206 (347)
T ss_dssp TTCCEEECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCCC-GG-GGGCTTCCEEEC
T ss_pred CceeEEECCCCCCccccc-chhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCccccc-cc-ccCCCccceeec
Confidence 999999999997765554 49999999999999999986544 88999999999999999854 43 889999999999
Q ss_pred cCCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccCCCCCCCEEEccCccCccccCCCccCCCCcccEEEccCCCCCC
Q 004248 246 SNNSLASSIPAQLGDLDSLVDLDLSMNSLSGSVPSELRGLRSLQKFVIGNNFLSGNLSVNLFPTVSQLQIIVLRQNGFTG 325 (766)
Q Consensus 246 s~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~~~~~~~~~l~~L~~L~L~~N~l~~ 325 (766)
++|.+++..+ +..+++|++|++++|++++..+ +..+++|++|++++|.+++. + .+..+++|+.|++++|++++
T Consensus 207 ~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-~--~~~~l~~L~~L~l~~n~l~~ 279 (347)
T 4fmz_A 207 YVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI-N--AVKDLTKLKMLNVGSNQISD 279 (347)
T ss_dssp CSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC-G--GGTTCTTCCEEECCSSCCCC
T ss_pred ccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC-h--hHhcCCCcCEEEccCCccCC
Confidence 9999987654 8899999999999999986544 89999999999999999863 2 46889999999999999998
Q ss_pred CCCcccCCCCCCCEEEccCCCCCCCCCcccccCCCCCcEEEccCCcCccCCC-cCCCCCCEEeccCCcCc
Q 004248 326 PPPDVLWSMPQLRLLDISRNNFTGPLPNSRSNVNTSTVELNISQNMFYGGLT-PVLGRFRLVDLSGNYFE 394 (766)
Q Consensus 326 ~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~L~ls~N~l~g~~~-~~l~~l~~ldLs~N~l~ 394 (766)
. +.+..+++|+.|++++|++++..|.. +..+++|+.|++++|.+++..| ..+++|+.||+++|.|+
T Consensus 280 ~--~~~~~l~~L~~L~L~~n~l~~~~~~~-l~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 280 I--SVLNNLSQLNSLFLNNNQLGNEDMEV-IGGLTNLTTLFLSQNHITDIRPLASLSKMDSADFANQVIK 346 (347)
T ss_dssp C--GGGGGCTTCSEEECCSSCCCGGGHHH-HHTCTTCSEEECCSSSCCCCGGGGGCTTCSEESSSCC---
T ss_pred C--hhhcCCCCCCEEECcCCcCCCcChhH-hhccccCCEEEccCCccccccChhhhhccceeehhhhccc
Confidence 6 46889999999999999999776643 4567899999999999988766 46889999999999985
No 303
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.96 E-value=5.3e-29 Score=270.94 Aligned_cols=247 Identities=21% Similarity=0.275 Sum_probs=188.7
Q ss_pred CCchhhhhCCCCCCEEEccCCCCCccCCcccCCCCCCcEEEeecCcCCCCCCccccCCCCCCEEEccCCCCCCCCCcccC
Q 004248 132 SIPDWLGQQLPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPSSLGQLSVLSVLDLSRNSLTGNIPTSFG 211 (766)
Q Consensus 132 ~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~ 211 (766)
.+|..+ .++|++|+|++|.+++..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|++++..+..|.
T Consensus 45 ~iP~~~---~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~ 121 (353)
T 2z80_A 45 SIPSGL---TEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFK 121 (353)
T ss_dssp SCCTTC---CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHT
T ss_pred cccccc---cccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhC
Confidence 456544 35899999999999988777999999999999999999988888999999999999999999975555699
Q ss_pred CCCCCCEEeccCCcCCCCCCC--CCCCCCCccEEEccCC-CCCCCCccccCCCCCCCEEEccCCcCCccCCcccCCCCCC
Q 004248 212 LLKNLSSLDISSNYLTGSIPP--GLGTLSKLQYLNVSNN-SLASSIPAQLGDLDSLVDLDLSMNSLSGSVPSELRGLRSL 288 (766)
Q Consensus 212 ~l~~L~~L~Ls~N~l~~~~p~--~l~~l~~L~~L~Ls~N-~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L 288 (766)
++++|++|+|++|++++ +|. .+.++++|++|++++| .+....|..++++++|++|++++|++++..|..+.++++|
T Consensus 122 ~l~~L~~L~L~~n~l~~-l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L 200 (353)
T 2z80_A 122 PLSSLTFLNLLGNPYKT-LGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNV 200 (353)
T ss_dssp TCTTCSEEECTTCCCSS-SCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEE
T ss_pred CCccCCEEECCCCCCcc-cCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccC
Confidence 99999999999999985 554 7889999999999999 4666667788999999999999999998888888888888
Q ss_pred CEEEccCccCccccCCCccCCCCcccEEEccCCCCCCCCCcccC---CCCCCCEEEccCCCCCCCCCcccccCCCCCcEE
Q 004248 289 QKFVIGNNFLSGNLSVNLFPTVSQLQIIVLRQNGFTGPPPDVLW---SMPQLRLLDISRNNFTGPLPNSRSNVNTSTVEL 365 (766)
Q Consensus 289 ~~L~ls~N~l~g~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~---~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~L 365 (766)
++|++++|.+. .++...+..+++|+.|++++|++++..+..+. ..+.++.+++++|.+++.
T Consensus 201 ~~L~l~~n~l~-~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~--------------- 264 (353)
T 2z80_A 201 SHLILHMKQHI-LLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDE--------------- 264 (353)
T ss_dssp EEEEEECSCST-THHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHH---------------
T ss_pred CeecCCCCccc-cchhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccccCc---------------
Confidence 88888888875 34444445567777777777777765544332 233444444444444321
Q ss_pred EccCCcCccCCC---cCCCCCCEEeccCCcCccccChhhhhcc
Q 004248 366 NISQNMFYGGLT---PVLGRFRLVDLSGNYFEGRVPEYVHSNA 405 (766)
Q Consensus 366 ~ls~N~l~g~~~---~~l~~l~~ldLs~N~l~g~~p~~~~~~~ 405 (766)
.+. .+| ..+++|+.|||++|+++ .+|..+..++
T Consensus 265 -----~l~-~l~~~l~~l~~L~~L~Ls~N~l~-~i~~~~~~~l 300 (353)
T 2z80_A 265 -----SLF-QVMKLLNQISGLLELEFSRNQLK-SVPDGIFDRL 300 (353)
T ss_dssp -----HHH-HHHHHHHTCTTCCEEECCSSCCC-CCCTTTTTTC
T ss_pred -----chh-hhHHHHhcccCCCEEECCCCCCC-ccCHHHHhcC
Confidence 000 122 24678888999999988 6776653333
No 304
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=9.4e-28 Score=270.11 Aligned_cols=226 Identities=25% Similarity=0.268 Sum_probs=110.7
Q ss_pred CCCEEecCCCCCCCCCchhhhhCCCCCCEEEccCCCCCccCCcccCCCCCCcEEEeecCcCCCCCCccccCCCCCCEEEc
Q 004248 118 HLASFNASRFLLPGSIPDWLGQQLPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPSSLGQLSVLSVLDL 197 (766)
Q Consensus 118 ~L~~L~ls~n~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L 197 (766)
+|+.|++++|.+.+..|..+.. +++|++|+|++|.+++..|..|.++++|++|+|++|++++..+..|.++++|++|+|
T Consensus 76 ~l~~L~L~~n~i~~~~~~~~~~-l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 154 (452)
T 3zyi_A 76 NTRYLNLMENNIQMIQADTFRH-LHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWL 154 (452)
T ss_dssp TCSEEECCSSCCCEECTTTTTT-CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEEC
T ss_pred CccEEECcCCcCceECHHHcCC-CCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEEC
Confidence 4455555555554444444432 555555555555555555555555555555555555555444444555555555555
Q ss_pred cCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCC-CCCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCc
Q 004248 198 SRNSLTGNIPTSFGLLKNLSSLDISSNYLTGSIPP-GLGTLSKLQYLNVSNNSLASSIPAQLGDLDSLVDLDLSMNSLSG 276 (766)
Q Consensus 198 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g 276 (766)
++|+++...+..|.++++|+.|+|++|+..+.+|. .|.++++|++|+|++|++++. | .+..+++|++|+|++|++++
T Consensus 155 ~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~Ls~N~l~~ 232 (452)
T 3zyi_A 155 RNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-P-NLTPLVGLEELEMSGNHFPE 232 (452)
T ss_dssp CSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-C-CCTTCTTCCEEECTTSCCSE
T ss_pred CCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-c-cccccccccEEECcCCcCcc
Confidence 55555544444455555555555555322222222 344555555555555555432 2 24445555555555555555
Q ss_pred cCCcccCCCCCCCEEEccCccCccccCCCccCCCCcccEEEccCCCCCCCCCcccCCCCCCCEEEccCCCC
Q 004248 277 SVPSELRGLRSLQKFVIGNNFLSGNLSVNLFPTVSQLQIIVLRQNGFTGPPPDVLWSMPQLRLLDISRNNF 347 (766)
Q Consensus 277 ~~p~~l~~l~~L~~L~ls~N~l~g~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l 347 (766)
..|..|.++++|+.|++++|.+++..+ ..|..+++|+.|+|++|++++.++..+..+++|+.|+|++|.+
T Consensus 233 ~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~ 302 (452)
T 3zyi_A 233 IRPGSFHGLSSLKKLWVMNSQVSLIER-NAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPW 302 (452)
T ss_dssp ECGGGGTTCTTCCEEECTTSCCCEECT-TTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCE
T ss_pred cCcccccCccCCCEEEeCCCcCceECH-HHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCc
Confidence 445555555555555555555543222 2234444455555555555444444444444444444444444
No 305
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.96 E-value=2.7e-28 Score=274.09 Aligned_cols=285 Identities=25% Similarity=0.265 Sum_probs=199.8
Q ss_pred CEEEEEcCCCCcCCCCCCCCccchhhhccCCCCCEEecCCCCCCCCCchhhhhCCCC-------------CCEEEccCCC
Q 004248 87 SVVGINISGFRRTRLGSQNPRFAADALVNLTHLASFNASRFLLPGSIPDWLGQQLPT-------------LQALDLRSCS 153 (766)
Q Consensus 87 ~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~L~ls~n~l~g~ip~~~~~~l~~-------------L~~L~Ls~N~ 153 (766)
++..+++++... |.++ .+++++++|++|++++|.+.|.+|+.++. +.+ |++|++++|.
T Consensus 12 ~L~~L~l~~n~l---~~iP-----~~i~~L~~L~~L~l~~n~~~~~~p~~~~~-l~~L~~l~l~~c~~~~l~~L~l~~~~ 82 (454)
T 1jl5_A 12 FLQEPLRHSSNL---TEMP-----VEAENVKSKTEYYNAWSEWERNAPPGNGE-QREMAVSRLRDCLDRQAHELELNNLG 82 (454)
T ss_dssp ------------------------------CCHHHHHHHHHHHHHTSCTTSCC-CHHHHHHHHHHHHHHTCSEEECTTSC
T ss_pred cchhhhcccCch---hhCC-----hhHhcccchhhhhccCCcccccCCccccc-chhcchhhhhhhhccCCCEEEecCCc
Confidence 455566655432 3333 35778888888888888888888877654 554 4888888888
Q ss_pred CCccCCcccCCCCCCcEEEeecCcCCCCCCccccCCCCCCEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCC
Q 004248 154 ISGVIPFSLGNLTNLTSLYLSDNGLTGTIPSSLGQLSVLSVLDLSRNSLTGNIPTSFGLLKNLSSLDISSNYLTGSIPPG 233 (766)
Q Consensus 154 l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 233 (766)
+++. |.. .++|++|+|++|.+++ +|.. +++|++|++++|++++ +|.. .++|++|++++|++++ +| .
T Consensus 83 l~~l-p~~---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~-lp-~ 148 (454)
T 1jl5_A 83 LSSL-PEL---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK-LP-E 148 (454)
T ss_dssp CSCC-CSC---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS-CC-C
T ss_pred cccC-CCC---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC-Cc-c
Confidence 8763 331 3678888888888886 6653 3678888888888875 3322 2689999999999986 77 5
Q ss_pred CCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccCCCCCCCEEEccCccCccccCCCccCCCCcc
Q 004248 234 LGTLSKLQYLNVSNNSLASSIPAQLGDLDSLVDLDLSMNSLSGSVPSELRGLRSLQKFVIGNNFLSGNLSVNLFPTVSQL 313 (766)
Q Consensus 234 l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~~~~~~~~~l~~L 313 (766)
++++++|++|++++|++++ +|..+ ++|++|++++|++++ +| .++++++|++|++++|.+++ +|.. .++|
T Consensus 149 ~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~----~~~L 217 (454)
T 1jl5_A 149 LQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDL----PLSL 217 (454)
T ss_dssp CTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCC----CTTC
T ss_pred cCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCC----cCcc
Confidence 8899999999999999886 66543 588999999999987 56 68899999999999999886 4432 2588
Q ss_pred cEEEccCCCCCCCCCcccCCCCCCCEEEccCCCCCCCCCcccccCCCCCcEEEccCCcCccCCCcCCCCCCEEeccCCcC
Q 004248 314 QIIVLRQNGFTGPPPDVLWSMPQLRLLDISRNNFTGPLPNSRSNVNTSTVELNISQNMFYGGLTPVLGRFRLVDLSGNYF 393 (766)
Q Consensus 314 ~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~L~ls~N~l~g~~~~~l~~l~~ldLs~N~l 393 (766)
+.|++++|+++ .+|. +..+++|++|++++|++++ +|.. ..+++.|++++|.+.+ +|..+.+|+.|++++|++
T Consensus 218 ~~L~l~~n~l~-~lp~-~~~l~~L~~L~l~~N~l~~-l~~~----~~~L~~L~l~~N~l~~-l~~~~~~L~~L~ls~N~l 289 (454)
T 1jl5_A 218 ESIVAGNNILE-ELPE-LQNLPFLTTIYADNNLLKT-LPDL----PPSLEALNVRDNYLTD-LPELPQSLTFLDVSENIF 289 (454)
T ss_dssp CEEECCSSCCS-SCCC-CTTCTTCCEEECCSSCCSS-CCSC----CTTCCEEECCSSCCSC-CCCCCTTCCEEECCSSCC
T ss_pred cEEECcCCcCC-cccc-cCCCCCCCEEECCCCcCCc-cccc----ccccCEEECCCCcccc-cCcccCcCCEEECcCCcc
Confidence 99999999988 4553 8889999999999999985 5532 3678899999998886 676778899999999999
Q ss_pred cc--ccChhhhhcccCCCcccCCC
Q 004248 394 EG--RVPEYVHSNASSLDSNCLQN 415 (766)
Q Consensus 394 ~g--~~p~~~~~~~~~l~~n~l~~ 415 (766)
++ .+|..+. . -.++.|.+.+
T Consensus 290 ~~l~~~~~~L~-~-L~l~~N~l~~ 311 (454)
T 1jl5_A 290 SGLSELPPNLY-Y-LNASSNEIRS 311 (454)
T ss_dssp SEESCCCTTCC-E-EECCSSCCSE
T ss_pred CcccCcCCcCC-E-EECcCCcCCc
Confidence 87 4443221 1 1345555543
No 306
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.96 E-value=1.7e-27 Score=267.02 Aligned_cols=226 Identities=27% Similarity=0.287 Sum_probs=113.5
Q ss_pred CCCEEecCCCCCCCCCchhhhhCCCCCCEEEccCCCCCccCCcccCCCCCCcEEEeecCcCCCCCCccccCCCCCCEEEc
Q 004248 118 HLASFNASRFLLPGSIPDWLGQQLPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPSSLGQLSVLSVLDL 197 (766)
Q Consensus 118 ~L~~L~ls~n~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~L 197 (766)
+++.|++++|.+.+..|..+.. +++|++|+|++|.+++..+..|.++++|++|+|++|++++..+..|.++++|++|+|
T Consensus 65 ~l~~L~L~~n~i~~~~~~~~~~-l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 143 (440)
T 3zyj_A 65 NTRLLNLHENQIQIIKVNSFKH-LRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWL 143 (440)
T ss_dssp TCSEEECCSCCCCEECTTTTSS-CSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEEC
T ss_pred CCcEEEccCCcCCeeCHHHhhC-CCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeC
Confidence 4455555555554433333332 555555555555555555555555555555555555555444444555555555555
Q ss_pred cCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCC-CCCCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCc
Q 004248 198 SRNSLTGNIPTSFGLLKNLSSLDISSNYLTGSIP-PGLGTLSKLQYLNVSNNSLASSIPAQLGDLDSLVDLDLSMNSLSG 276 (766)
Q Consensus 198 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g 276 (766)
++|+++...+..|.++++|+.|+|++|+..+.++ ..|.++++|++|+|++|+++. +| .+..+++|++|+|++|++++
T Consensus 144 ~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~Ls~N~l~~ 221 (440)
T 3zyj_A 144 RNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLRE-IP-NLTPLIKLDELDLSGNHLSA 221 (440)
T ss_dssp CSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSS-CC-CCTTCSSCCEEECTTSCCCE
T ss_pred CCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCcc-cc-ccCCCcccCEEECCCCccCc
Confidence 5555554444455555555555555533222222 234555555555555555542 33 24455555555555555555
Q ss_pred cCCcccCCCCCCCEEEccCccCccccCCCccCCCCcccEEEccCCCCCCCCCcccCCCCCCCEEEccCCCC
Q 004248 277 SVPSELRGLRSLQKFVIGNNFLSGNLSVNLFPTVSQLQIIVLRQNGFTGPPPDVLWSMPQLRLLDISRNNF 347 (766)
Q Consensus 277 ~~p~~l~~l~~L~~L~ls~N~l~g~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l 347 (766)
..|..|.++++|+.|++++|.+++.. ...|..+++|+.|+|++|++++.++..|..+++|+.|+|++|.+
T Consensus 222 ~~~~~~~~l~~L~~L~L~~n~l~~~~-~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~ 291 (440)
T 3zyj_A 222 IRPGSFQGLMHLQKLWMIQSQIQVIE-RNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPW 291 (440)
T ss_dssp ECTTTTTTCTTCCEEECTTCCCCEEC-TTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCE
T ss_pred cChhhhccCccCCEEECCCCceeEEC-hhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCc
Confidence 55555555555555555555554322 22334445555555555555544444444555555555555544
No 307
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=1.6e-27 Score=268.26 Aligned_cols=228 Identities=19% Similarity=0.205 Sum_probs=194.0
Q ss_pred CCCCEEEccCCCCCccCCcccCCCCCCcEEEeecCcCCCCCCccccCCCCCCEEEccCCCCCCCCCcccCCCCCCCEEec
Q 004248 142 PTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPSSLGQLSVLSVLDLSRNSLTGNIPTSFGLLKNLSSLDI 221 (766)
Q Consensus 142 ~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 221 (766)
++|++|+|++|.+++..|..|.++++|++|+|++|++++..|..|.++++|++|+|++|++++..+..|.++++|++|+|
T Consensus 75 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 154 (452)
T 3zyi_A 75 SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWL 154 (452)
T ss_dssp TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEEC
T ss_pred CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEEC
Confidence 58999999999999999999999999999999999999888899999999999999999999877778999999999999
Q ss_pred cCCcCCCCCCCCCCCCCCccEEEccCCCCCCCCc-cccCCCCCCCEEEccCCcCCccCCcccCCCCCCCEEEccCccCcc
Q 004248 222 SSNYLTGSIPPGLGTLSKLQYLNVSNNSLASSIP-AQLGDLDSLVDLDLSMNSLSGSVPSELRGLRSLQKFVIGNNFLSG 300 (766)
Q Consensus 222 s~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p-~~l~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g 300 (766)
++|.++...+..|.++++|++|++++|+..+.+| ..|.++++|++|+|++|++++. | .+..+++|+.|++++|.+++
T Consensus 155 ~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~Ls~N~l~~ 232 (452)
T 3zyi_A 155 RNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-P-NLTPLVGLEELEMSGNHFPE 232 (452)
T ss_dssp CSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-C-CCTTCTTCCEEECTTSCCSE
T ss_pred CCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-c-cccccccccEEECcCCcCcc
Confidence 9999997767789999999999999955444454 4688999999999999999864 4 58889999999999999987
Q ss_pred ccCCCccCCCCcccEEEccCCCCCCCCCcccCCCCCCCEEEccCCCCCCCCCcccccCCCCCcEEEccCCcCc
Q 004248 301 NLSVNLFPTVSQLQIIVLRQNGFTGPPPDVLWSMPQLRLLDISRNNFTGPLPNSRSNVNTSTVELNISQNMFY 373 (766)
Q Consensus 301 ~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~L~ls~N~l~ 373 (766)
..| ..|..+++|+.|+|++|++++..|..|..+++|+.|+|++|++++..+ ..+..+.+|+.|++++|.+.
T Consensus 233 ~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~Np~~ 303 (452)
T 3zyi_A 233 IRP-GSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPH-DLFTPLRYLVELHLHHNPWN 303 (452)
T ss_dssp ECG-GGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCT-TSSTTCTTCCEEECCSSCEE
T ss_pred cCc-ccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccCh-HHhccccCCCEEEccCCCcC
Confidence 555 456889999999999999999999999999999999999999985444 33333444555555554443
No 308
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.95 E-value=2.9e-27 Score=276.90 Aligned_cols=286 Identities=21% Similarity=0.252 Sum_probs=228.3
Q ss_pred hhhhccCCCCCEEecCCCCCCCCCchhhhhCCCCCCEEEccCCCCCccCCcccCCCCCCcEEEeecCcCCC-CCCccccC
Q 004248 110 ADALVNLTHLASFNASRFLLPGSIPDWLGQQLPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTG-TIPSSLGQ 188 (766)
Q Consensus 110 ~~~l~~l~~L~~L~ls~n~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~-~~p~~l~~ 188 (766)
+.++.+|++|++|++++|.+.+ +|+..+.++++|++|+|++|.+++..+..|+++++|++|+|++|.+++ .+|..+++
T Consensus 93 ~~~f~~L~~L~~L~Ls~N~l~~-l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~ 171 (635)
T 4g8a_A 93 DGAYQSLSHLSTLILTGNPIQS-LALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSN 171 (635)
T ss_dssp TTTTTTCTTCCEEECTTCCCCE-ECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGG
T ss_pred hhHhcCCCCCCEEEccCCcCCC-CCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhcc
Confidence 4578899999999999999875 554433459999999999999999888889999999999999999976 46888999
Q ss_pred CCCCCEEEccCCCCCCCCCcccCC--------------------------------------------------------
Q 004248 189 LSVLSVLDLSRNSLTGNIPTSFGL-------------------------------------------------------- 212 (766)
Q Consensus 189 L~~L~~L~Ls~N~l~~~~p~~~~~-------------------------------------------------------- 212 (766)
+++|++|+|++|++++..|..|..
T Consensus 172 l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~~i~~~~~~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l 251 (635)
T 4g8a_A 172 LTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGL 251 (635)
T ss_dssp CTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESCCSSHHHHHHHHHTTTTC
T ss_pred chhhhhhcccCccccccccccccchhhhhhhhhhhhcccCcccccCcccccchhhhhhhhhcccccccccchhhcCCccc
Confidence 999999999999887654432211
Q ss_pred ---------------------------------------------------------------------------CCCCC
Q 004248 213 ---------------------------------------------------------------------------LKNLS 217 (766)
Q Consensus 213 ---------------------------------------------------------------------------l~~L~ 217 (766)
..+|+
T Consensus 252 ~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~L~ 331 (635)
T 4g8a_A 252 EVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQ 331 (635)
T ss_dssp EEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEESCEEEECGGGGSCCCCS
T ss_pred ccccccccccccccccccccccccccccchhhhhhhhhhhcccccchhhhhhhhcccccccccccccccccccccchhhh
Confidence 11233
Q ss_pred EEeccCCcCCCCCC-------------------CCCCCCCCccEEEccCCCCCC--------------------------
Q 004248 218 SLDISSNYLTGSIP-------------------PGLGTLSKLQYLNVSNNSLAS-------------------------- 252 (766)
Q Consensus 218 ~L~Ls~N~l~~~~p-------------------~~l~~l~~L~~L~Ls~N~l~~-------------------------- 252 (766)
.|++++|.+.+..+ .....+++|+.|++++|.+..
T Consensus 332 ~L~l~~~~~~~~~~~~l~~L~~l~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~ 411 (635)
T 4g8a_A 332 HLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVIT 411 (635)
T ss_dssp EEEEESCEESSCCCCBCTTCCEEEEESCCSCCBCCCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEE
T ss_pred hhhcccccccCcCcccchhhhhcccccccCCCCcccccccccccchhhccccccccccccchhhhhhhhhhhcccccccc
Confidence 44444444332111 112345667777777665531
Q ss_pred -----------------------CC-ccccCCCCCCCEEEccCCcCCccCCcccCCCCCCCEEEccCccCccccCCCccC
Q 004248 253 -----------------------SI-PAQLGDLDSLVDLDLSMNSLSGSVPSELRGLRSLQKFVIGNNFLSGNLSVNLFP 308 (766)
Q Consensus 253 -----------------------~~-p~~l~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~~~~~~~~ 308 (766)
.. +..+.++++|+.++++.|.+.+..|..+..+++|+.|++++|.+...+++..|.
T Consensus 412 ~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~ 491 (635)
T 4g8a_A 412 MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFT 491 (635)
T ss_dssp ECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCT
T ss_pred ccccccccccccchhhhhccccccccccccccccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhh
Confidence 11 234567788999999999999999999999999999999999876666666789
Q ss_pred CCCcccEEEccCCCCCCCCCcccCCCCCCCEEEccCCCCCCCCCcccccCCCCCcEEEccCCcCccCCCcCC----CCCC
Q 004248 309 TVSQLQIIVLRQNGFTGPPPDVLWSMPQLRLLDISRNNFTGPLPNSRSNVNTSTVELNISQNMFYGGLTPVL----GRFR 384 (766)
Q Consensus 309 ~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~L~ls~N~l~g~~~~~l----~~l~ 384 (766)
.+++|+.|+|++|++++.+|..|.++++|++|+|++|+|++..|. .+..+++|+.|++++|++++..|..+ .+|+
T Consensus 492 ~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~ 570 (635)
T 4g8a_A 492 ELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTF-PYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLA 570 (635)
T ss_dssp TCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCG-GGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCC
T ss_pred hccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChh-HHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCC
Confidence 999999999999999999999999999999999999999976664 45667899999999999999888653 5799
Q ss_pred EEeccCCcCcccc
Q 004248 385 LVDLSGNYFEGRV 397 (766)
Q Consensus 385 ~ldLs~N~l~g~~ 397 (766)
.|+|++|+|+..-
T Consensus 571 ~L~L~~Np~~C~C 583 (635)
T 4g8a_A 571 FLNLTQNDFACTC 583 (635)
T ss_dssp EEECTTCCBCCSG
T ss_pred EEEeeCCCCcccC
Confidence 9999999998753
No 309
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.95 E-value=2.5e-27 Score=265.71 Aligned_cols=234 Identities=21% Similarity=0.232 Sum_probs=197.2
Q ss_pred CCchhhhhCCCCCCEEEccCCCCCccCCcccCCCCCCcEEEeecCcCCCCCCccccCCCCCCEEEccCCCCCCCCCcccC
Q 004248 132 SIPDWLGQQLPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPSSLGQLSVLSVLDLSRNSLTGNIPTSFG 211 (766)
Q Consensus 132 ~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~ 211 (766)
.+|..+ .++++.|+|++|.+++..+..|.++++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|.
T Consensus 57 ~iP~~~---~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 133 (440)
T 3zyj_A 57 EVPDGI---STNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFV 133 (440)
T ss_dssp SCCSCC---CTTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSC
T ss_pred cCCCCC---CCCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhh
Confidence 355544 35799999999999999999999999999999999999988889999999999999999999987777899
Q ss_pred CCCCCCEEeccCCcCCCCCCCCCCCCCCccEEEccCCCCCCCCc-cccCCCCCCCEEEccCCcCCccCCcccCCCCCCCE
Q 004248 212 LLKNLSSLDISSNYLTGSIPPGLGTLSKLQYLNVSNNSLASSIP-AQLGDLDSLVDLDLSMNSLSGSVPSELRGLRSLQK 290 (766)
Q Consensus 212 ~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p-~~l~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~ 290 (766)
.+++|++|+|++|.++...+..|.++++|++|+|++|+..+.+| ..|.++++|++|+|++|+++ .+| .+..+++|+.
T Consensus 134 ~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~-~~~~l~~L~~ 211 (440)
T 3zyj_A 134 YLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIP-NLTPLIKLDE 211 (440)
T ss_dssp SCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCC-CCTTCSSCCE
T ss_pred ccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-ccc-ccCCCcccCE
Confidence 99999999999999997777789999999999999965444444 47889999999999999998 455 5888999999
Q ss_pred EEccCccCccccCCCccCCCCcccEEEccCCCCCCCCCcccCCCCCCCEEEccCCCCCCCCCcccccCCCCCcEEEccCC
Q 004248 291 FVIGNNFLSGNLSVNLFPTVSQLQIIVLRQNGFTGPPPDVLWSMPQLRLLDISRNNFTGPLPNSRSNVNTSTVELNISQN 370 (766)
Q Consensus 291 L~ls~N~l~g~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~L~ls~N 370 (766)
|++++|.+++..+ ..|..+++|+.|+|++|++++..+..|.++++|+.|||++|++++..+ ..+..+.+|+.|+|++|
T Consensus 212 L~Ls~N~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N 289 (440)
T 3zyj_A 212 LDLSGNHLSAIRP-GSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPH-DLFTPLHHLERIHLHHN 289 (440)
T ss_dssp EECTTSCCCEECT-TTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCT-TTTSSCTTCCEEECCSS
T ss_pred EECCCCccCccCh-hhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccCh-hHhccccCCCEEEcCCC
Confidence 9999999986544 456889999999999999999999999999999999999999985444 33333444444444444
Q ss_pred cC
Q 004248 371 MF 372 (766)
Q Consensus 371 ~l 372 (766)
.+
T Consensus 290 p~ 291 (440)
T 3zyj_A 290 PW 291 (440)
T ss_dssp CE
T ss_pred Cc
Confidence 44
No 310
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.95 E-value=8.8e-28 Score=253.16 Aligned_cols=253 Identities=19% Similarity=0.220 Sum_probs=216.5
Q ss_pred CEEEccCCCCCccCCcccCCCCCCcEEEeecCcCCCCCCccccCCCCCCEEEccCCCCCCCCCcccCCCCCCCEEeccCC
Q 004248 145 QALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPSSLGQLSVLSVLDLSRNSLTGNIPTSFGLLKNLSSLDISSN 224 (766)
Q Consensus 145 ~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 224 (766)
++++.+++.++. +|..+ .++|++|+|++|++++..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|
T Consensus 14 ~~~~c~~~~l~~-ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 90 (285)
T 1ozn_A 14 VTTSCPQQGLQA-VPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDN 90 (285)
T ss_dssp CEEECCSSCCSS-CCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSC
T ss_pred eEEEcCcCCccc-CCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCC
Confidence 678888888874 45443 579999999999999877788999999999999999999888999999999999999999
Q ss_pred c-CCCCCCCCCCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccCCCCCCCEEEccCccCccccC
Q 004248 225 Y-LTGSIPPGLGTLSKLQYLNVSNNSLASSIPAQLGDLDSLVDLDLSMNSLSGSVPSELRGLRSLQKFVIGNNFLSGNLS 303 (766)
Q Consensus 225 ~-l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~~~ 303 (766)
. ++...|..+..+++|++|++++|.+++..|..+.++++|++|++++|++++..+..+.++++|++|++++|.+++ ++
T Consensus 91 ~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-~~ 169 (285)
T 1ozn_A 91 AQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISS-VP 169 (285)
T ss_dssp TTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCE-EC
T ss_pred CCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccc-cC
Confidence 7 776668899999999999999999999889999999999999999999998877889999999999999999984 55
Q ss_pred CCccCCCCcccEEEccCCCCCCCCCcccCCCCCCCEEEccCCCCCCCCCcccccCCCCCcEEEccCCcCccCCCc--CCC
Q 004248 304 VNLFPTVSQLQIIVLRQNGFTGPPPDVLWSMPQLRLLDISRNNFTGPLPNSRSNVNTSTVELNISQNMFYGGLTP--VLG 381 (766)
Q Consensus 304 ~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~L~ls~N~l~g~~~~--~l~ 381 (766)
...|..+++|+.|++++|++++..|..+..+++|+.|++++|++++..+ ..+...++|+.|++++|.+.+..+. ...
T Consensus 170 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~l~~N~~~c~~~~~~~~~ 248 (285)
T 1ozn_A 170 ERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPT-EALAPLRALQYLRLNDNPWVCDCRARPLWA 248 (285)
T ss_dssp TTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCH-HHHTTCTTCCEEECCSSCEECSGGGHHHHH
T ss_pred HHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCH-HHcccCcccCEEeccCCCccCCCCcHHHHH
Confidence 5567889999999999999999999999999999999999999997544 3445667888888888888765442 112
Q ss_pred CCCEEeccCCcCccccChhhh
Q 004248 382 RFRLVDLSGNYFEGRVPEYVH 402 (766)
Q Consensus 382 ~l~~ldLs~N~l~g~~p~~~~ 402 (766)
.++.++.+.|.+.+..|+.+.
T Consensus 249 ~l~~~~~~~~~~~c~~p~~l~ 269 (285)
T 1ozn_A 249 WLQKFRGSSSEVPCSLPQRLA 269 (285)
T ss_dssp HHHHCCSEECCCBEEESGGGT
T ss_pred HHHhcccccCccccCCchHhC
Confidence 234445677777777777653
No 311
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.95 E-value=9e-27 Score=261.71 Aligned_cols=249 Identities=23% Similarity=0.289 Sum_probs=137.3
Q ss_pred CCCCEEecCCCCCCCCCchhhhhCCCCCCEEEccCCCCCccCCcccCCCCCCcEEEeecCcCCCCCCccccCCCCCCEEE
Q 004248 117 THLASFNASRFLLPGSIPDWLGQQLPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPSSLGQLSVLSVLD 196 (766)
Q Consensus 117 ~~L~~L~ls~n~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~ 196 (766)
++|+.|++++|.+.+ +|.. .++|++|+|++|.+++ +| .++++++|++|++++|++++ +|..+ .+|++|+
T Consensus 111 ~~L~~L~l~~n~l~~-l~~~----~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~ 179 (454)
T 1jl5_A 111 QSLKSLLVDNNNLKA-LSDL----PPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIA 179 (454)
T ss_dssp TTCCEEECCSSCCSC-CCSC----CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEE
T ss_pred CCCcEEECCCCccCc-ccCC----CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEE
Confidence 455555555555543 3211 1355555555555554 44 35555555555555555553 44322 2555555
Q ss_pred ccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCCCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCc
Q 004248 197 LSRNSLTGNIPTSFGLLKNLSSLDISSNYLTGSIPPGLGTLSKLQYLNVSNNSLASSIPAQLGDLDSLVDLDLSMNSLSG 276 (766)
Q Consensus 197 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g 276 (766)
+++|++++ +| .++++++|+.|++++|.+++ +|... ++|++|++++|.++ .+|. ++.+++|++|++++|++++
T Consensus 180 L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~~---~~L~~L~l~~n~l~-~lp~-~~~l~~L~~L~l~~N~l~~ 251 (454)
T 1jl5_A 180 AGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDLP---LSLESIVAGNNILE-ELPE-LQNLPFLTTIYADNNLLKT 251 (454)
T ss_dssp CCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCCC---TTCCEEECCSSCCS-SCCC-CTTCTTCCEEECCSSCCSS
T ss_pred CcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCCc---CcccEEECcCCcCC-cccc-cCCCCCCCEEECCCCcCCc
Confidence 55555554 34 35555555555555555553 33221 34555555555554 3442 4455555555555555543
Q ss_pred cCCccc-----------------CCCCCCCEEEccCccCccccCCCccCCCCcccEEEccCCCCCCCCCcccCCC-CCCC
Q 004248 277 SVPSEL-----------------RGLRSLQKFVIGNNFLSGNLSVNLFPTVSQLQIIVLRQNGFTGPPPDVLWSM-PQLR 338 (766)
Q Consensus 277 ~~p~~l-----------------~~l~~L~~L~ls~N~l~g~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l-~~L~ 338 (766)
+|..+ ...++|+.|++++|.+++ ++. ..++|+.|++++|++++. ..+ ++|+
T Consensus 252 -l~~~~~~L~~L~l~~N~l~~l~~~~~~L~~L~ls~N~l~~-l~~----~~~~L~~L~l~~N~l~~i-----~~~~~~L~ 320 (454)
T 1jl5_A 252 -LPDLPPSLEALNVRDNYLTDLPELPQSLTFLDVSENIFSG-LSE----LPPNLYYLNASSNEIRSL-----CDLPPSLE 320 (454)
T ss_dssp -CCSCCTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSE-ESC----CCTTCCEEECCSSCCSEE-----CCCCTTCC
T ss_pred -ccccccccCEEECCCCcccccCcccCcCCEEECcCCccCc-ccC----cCCcCCEEECcCCcCCcc-----cCCcCcCC
Confidence 22211 012344455555554443 110 013455555555555431 123 5888
Q ss_pred EEEccCCCCCCCCCcccccCCCCCcEEEccCCcCccCCCcCCCCCCEEeccCCcCcc--ccChhh
Q 004248 339 LLDISRNNFTGPLPNSRSNVNTSTVELNISQNMFYGGLTPVLGRFRLVDLSGNYFEG--RVPEYV 401 (766)
Q Consensus 339 ~L~Ls~N~l~g~~p~~~~~~~~~l~~L~ls~N~l~g~~~~~l~~l~~ldLs~N~l~g--~~p~~~ 401 (766)
.|++++|++++ +|.. ..+++.|++++|.++ .+|..+.+|+.||+++|+++| .+|..+
T Consensus 321 ~L~Ls~N~l~~-lp~~----~~~L~~L~L~~N~l~-~lp~~l~~L~~L~L~~N~l~~l~~ip~~l 379 (454)
T 1jl5_A 321 ELNVSNNKLIE-LPAL----PPRLERLIASFNHLA-EVPELPQNLKQLHVEYNPLREFPDIPESV 379 (454)
T ss_dssp EEECCSSCCSC-CCCC----CTTCCEEECCSSCCS-CCCCCCTTCCEEECCSSCCSSCCCCCTTC
T ss_pred EEECCCCcccc-cccc----CCcCCEEECCCCccc-cccchhhhccEEECCCCCCCcCCCChHHH
Confidence 99999999886 6643 478889999999888 466677889999999999998 777765
No 312
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.94 E-value=5.6e-26 Score=263.42 Aligned_cols=281 Identities=27% Similarity=0.337 Sum_probs=226.8
Q ss_pred CCCCCCCCCCCcccee--------ecCCCEEEEEcCCCCcCCCCCCCCccchhhhccCCCCCEEecCCCCCCCCCchhhh
Q 004248 67 DWPRKVDPCLVWNGVR--------CQNGSVVGINISGFRRTRLGSQNPRFAADALVNLTHLASFNASRFLLPGSIPDWLG 138 (766)
Q Consensus 67 ~W~~~~~~C~~W~gv~--------C~~~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~L~ls~n~l~g~ip~~~~ 138 (766)
+|.... +||.|.|.. |....++.+++++.... .++.. +. ++|+.|++++|.+. .||.
T Consensus 14 ~W~~~~-~~~~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~---~lp~~-----l~--~~L~~L~L~~N~l~-~lp~--- 78 (622)
T 3g06_A 14 AWRRAA-PAEESRGRAAVVQKMRACLNNGNAVLNVGESGLT---TLPDC-----LP--AHITTLVIPDNNLT-SLPA--- 78 (622)
T ss_dssp HHHHTC-CGGGHHHHHHHHHHHHHHHHHCCCEEECCSSCCS---CCCSC-----CC--TTCSEEEECSCCCS-CCCC---
T ss_pred HHHhcC-CcchhccccccCcccccccCCCCcEEEecCCCcC---ccChh-----hC--CCCcEEEecCCCCC-CCCC---
Confidence 575444 456897643 33445788999886543 33322 22 78999999999987 6886
Q ss_pred hCCCCCCEEEccCCCCCccCCcccCCCCCCcEEEeecCcCCCCCCccccCCCCCCEEEccCCCCCCCCCcccCCCCCCCE
Q 004248 139 QQLPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPSSLGQLSVLSVLDLSRNSLTGNIPTSFGLLKNLSS 218 (766)
Q Consensus 139 ~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 218 (766)
.+++|++|+|++|.+++ +|. .+++|++|+|++|++++ +|. .+++|+.|++++|++++ +|.. +++|++
T Consensus 79 -~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L~~N~l~~-lp~~---l~~L~~ 145 (622)
T 3g06_A 79 -LPPELRTLEVSGNQLTS-LPV---LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWIFGNQLTS-LPVL---PPGLQE 145 (622)
T ss_dssp -CCTTCCEEEECSCCCSC-CCC---CCTTCCEEEECSCCCCC-CCC---CCTTCCEEECCSSCCSC-CCCC---CTTCCE
T ss_pred -cCCCCCEEEcCCCcCCc-CCC---CCCCCCEEECcCCcCCC-CCC---CCCCcCEEECCCCCCCc-CCCC---CCCCCE
Confidence 38899999999999985 555 78999999999999996 555 67899999999999985 6654 489999
Q ss_pred EeccCCcCCCCCCCCCCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccCCCCCCCEEEccCccC
Q 004248 219 LDISSNYLTGSIPPGLGTLSKLQYLNVSNNSLASSIPAQLGDLDSLVDLDLSMNSLSGSVPSELRGLRSLQKFVIGNNFL 298 (766)
Q Consensus 219 L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l 298 (766)
|+|++|.+++ +|.. +++|+.|++++|++++ +| ..+++|+.|++++|++++ +|.. +++|+.|++++|.+
T Consensus 146 L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l~~-l~---~~~~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l 213 (622)
T 3g06_A 146 LSVSDNQLAS-LPAL---PSELCKLWAYNNQLTS-LP---MLPSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRL 213 (622)
T ss_dssp EECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCC
T ss_pred EECcCCcCCC-cCCc---cCCCCEEECCCCCCCC-Cc---ccCCCCcEEECCCCCCCC-CCCc---cchhhEEECcCCcc
Confidence 9999999985 5653 5789999999999986 56 457899999999999986 5543 47899999999999
Q ss_pred ccccCCCccCCCCcccEEEccCCCCCCCCCcccCCCCCCCEEEccCCCCCCCCCcccccCCCCCcEEEccCCcCccCCCc
Q 004248 299 SGNLSVNLFPTVSQLQIIVLRQNGFTGPPPDVLWSMPQLRLLDISRNNFTGPLPNSRSNVNTSTVELNISQNMFYGGLTP 378 (766)
Q Consensus 299 ~g~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~L~ls~N~l~g~~~~ 378 (766)
+. +|. .+++|+.|+|++|++++.+ ..+++|+.|+|++|+|+ .+|. ...+|+.|++++|.++ .+|.
T Consensus 214 ~~-l~~----~~~~L~~L~Ls~N~L~~lp----~~l~~L~~L~Ls~N~L~-~lp~----~~~~L~~L~Ls~N~L~-~lp~ 278 (622)
T 3g06_A 214 TS-LPA----LPSGLKELIVSGNRLTSLP----VLPSELKELMVSGNRLT-SLPM----LPSGLLSLSVYRNQLT-RLPE 278 (622)
T ss_dssp SS-CCC----CCTTCCEEECCSSCCSCCC----CCCTTCCEEECCSSCCS-CCCC----CCTTCCEEECCSSCCC-SCCG
T ss_pred cc-cCC----CCCCCCEEEccCCccCcCC----CCCCcCcEEECCCCCCC-cCCc----ccccCcEEeCCCCCCC-cCCH
Confidence 84 443 3478999999999999844 46689999999999999 5664 4578999999999998 6775
Q ss_pred ---CCCCCCEEeccCCcCccccChhhh
Q 004248 379 ---VLGRFRLVDLSGNYFEGRVPEYVH 402 (766)
Q Consensus 379 ---~l~~l~~ldLs~N~l~g~~p~~~~ 402 (766)
.+++|+.|+|++|+++|.+|..+.
T Consensus 279 ~l~~l~~L~~L~L~~N~l~~~~~~~l~ 305 (622)
T 3g06_A 279 SLIHLSSETTVNLEGNPLSERTLQALR 305 (622)
T ss_dssp GGGGSCTTCEEECCSCCCCHHHHHHHH
T ss_pred HHhhccccCEEEecCCCCCCcCHHHHH
Confidence 467899999999999999988764
No 313
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.94 E-value=5.1e-26 Score=238.50 Aligned_cols=209 Identities=23% Similarity=0.259 Sum_probs=182.4
Q ss_pred CCCCEEEccCCCCCccCCcccCCCCCCcEEEeecCcCCCCCCccccCCCCCCEEEccCCCCCCCCCcccCCCCCCCEEec
Q 004248 142 PTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPSSLGQLSVLSVLDLSRNSLTGNIPTSFGLLKNLSSLDI 221 (766)
Q Consensus 142 ~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 221 (766)
++|++|+|++|.+++..+..|.++++|++|+|++|++++..+..+.++++|++|+|++|++++..|..|.++++|++|++
T Consensus 28 ~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 107 (276)
T 2z62_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (276)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEEC
Confidence 46899999999999888888999999999999999999777778999999999999999999888889999999999999
Q ss_pred cCCcCCCCCCCCCCCCCCccEEEccCCCCCCC-CccccCCCCCCCEEEccCCcCCccCCcccCCCCCCC----EEEccCc
Q 004248 222 SSNYLTGSIPPGLGTLSKLQYLNVSNNSLASS-IPAQLGDLDSLVDLDLSMNSLSGSVPSELRGLRSLQ----KFVIGNN 296 (766)
Q Consensus 222 s~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~-~p~~l~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~----~L~ls~N 296 (766)
++|.+++..+..++.+++|++|++++|.+++. +|..++++++|++|++++|++++..+..+..+++|+ .|++++|
T Consensus 108 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n 187 (276)
T 2z62_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLN 187 (276)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSS
T ss_pred CCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCC
Confidence 99999987777899999999999999999874 688999999999999999999988777777777666 8999999
Q ss_pred cCccccCCCccCCCCcccEEEccCCCCCCCCCcccCCCCCCCEEEccCCCCCCCCC
Q 004248 297 FLSGNLSVNLFPTVSQLQIIVLRQNGFTGPPPDVLWSMPQLRLLDISRNNFTGPLP 352 (766)
Q Consensus 297 ~l~g~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p 352 (766)
.+++. +...+.. .+|+.|+|++|++++.++..+..+++|+.|++++|++++..|
T Consensus 188 ~l~~~-~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 241 (276)
T 2z62_A 188 PMNFI-QPGAFKE-IRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 241 (276)
T ss_dssp CCCEE-CTTSSCS-CCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTT
T ss_pred ccccc-CccccCC-CcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCC
Confidence 99854 4444443 479999999999998888888889999999999998887655
No 314
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.94 E-value=1.6e-25 Score=233.94 Aligned_cols=185 Identities=28% Similarity=0.347 Sum_probs=151.0
Q ss_pred CCCCEEEccCCCCCccCCcccCCCCCCcEEEeecCcCCCCCCccccCCCCCCEEEccCCCCCCCCCcccCCCCCCCEEec
Q 004248 142 PTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPSSLGQLSVLSVLDLSRNSLTGNIPTSFGLLKNLSSLDI 221 (766)
Q Consensus 142 ~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 221 (766)
++|++|+|++|.+++..+..|.++++|++|+|++|+++...+..|.++++|++|+|++|++++..+..|..+++|++|+|
T Consensus 37 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 116 (270)
T 2o6q_A 37 ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRL 116 (270)
T ss_dssp TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEEC
T ss_pred CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEEC
Confidence 46888888888888777778888888888888888888655556678888888888888888766677788888888888
Q ss_pred cCCcCCCCCCCCCCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccCCCCCCCEEEccCccCccc
Q 004248 222 SSNYLTGSIPPGLGTLSKLQYLNVSNNSLASSIPAQLGDLDSLVDLDLSMNSLSGSVPSELRGLRSLQKFVIGNNFLSGN 301 (766)
Q Consensus 222 s~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~ 301 (766)
++|.+++..|..|..+++|++|+|++|.+++..+..+..+++|++|+|++|++++..+..|.++++|++|++++|.+++
T Consensus 117 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~- 195 (270)
T 2o6q_A 117 DRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKR- 195 (270)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSC-
T ss_pred CCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCc-
Confidence 8888887777778888888888888888887666668888888888888888887777778888888888888888874
Q ss_pred cCCCccCCCCcccEEEccCCCCCCCC
Q 004248 302 LSVNLFPTVSQLQIIVLRQNGFTGPP 327 (766)
Q Consensus 302 ~~~~~~~~l~~L~~L~L~~N~l~~~~ 327 (766)
++...|..+++|+.|+|++|.+....
T Consensus 196 ~~~~~~~~l~~L~~L~l~~N~~~c~c 221 (270)
T 2o6q_A 196 VPEGAFDSLEKLKMLQLQENPWDCTC 221 (270)
T ss_dssp CCTTTTTTCTTCCEEECCSSCBCCSS
T ss_pred CCHHHhccccCCCEEEecCCCeeCCC
Confidence 56566678888888888888886543
No 315
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.93 E-value=3.9e-28 Score=260.08 Aligned_cols=236 Identities=19% Similarity=0.196 Sum_probs=154.3
Q ss_pred EEecCCCCCCCCCchhhhhCCCCCCEEEccCCCCCccCCcccCCCCCCcEEEeecCcCCCCCCccccCCCCCCEEEccCC
Q 004248 121 SFNASRFLLPGSIPDWLGQQLPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPSSLGQLSVLSVLDLSRN 200 (766)
Q Consensus 121 ~L~ls~n~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N 200 (766)
..+++.+.+.. ++..+...+++|++|+|++|.+++..|..|.++++|++|+|++|.+++..| +..+++|++|+|++|
T Consensus 14 i~~ls~~~l~~-~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n 90 (317)
T 3o53_A 14 IEKVTDSSLKQ-ALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNN 90 (317)
T ss_dssp EESCCTTTHHH-HHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSS
T ss_pred Eeeccccchhh-hHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCC
Confidence 33444444422 223333446677777777777777766777777777777777777775443 777777777777777
Q ss_pred CCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCCCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCccCCc
Q 004248 201 SLTGNIPTSFGLLKNLSSLDISSNYLTGSIPPGLGTLSKLQYLNVSNNSLASSIPAQLGDLDSLVDLDLSMNSLSGSVPS 280 (766)
Q Consensus 201 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~ 280 (766)
++++. | ..++|+.|++++|.+++..+.. +++|++|++++|++++..|..++.+++|++|+|++|++++..|.
T Consensus 91 ~l~~l-~----~~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 162 (317)
T 3o53_A 91 YVQEL-L----VGPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFA 162 (317)
T ss_dssp EEEEE-E----ECTTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGG
T ss_pred ccccc-c----CCCCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHH
Confidence 77642 2 2367777777777777544332 56677788888877776666777777788888888877776666
Q ss_pred cc-CCCCCCCEEEccCccCccccCCCccCCCCcccEEEccCCCCCCCCCcccCCCCCCCEEEccCCCCCCCCCcccccCC
Q 004248 281 EL-RGLRSLQKFVIGNNFLSGNLSVNLFPTVSQLQIIVLRQNGFTGPPPDVLWSMPQLRLLDISRNNFTGPLPNSRSNVN 359 (766)
Q Consensus 281 ~l-~~l~~L~~L~ls~N~l~g~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~ 359 (766)
.+ ..+++|++|++++|.+++. +.. ..+++|+.|+|++|++++.++. +..+++|+.|+|++|+++ .+|... ...
T Consensus 163 ~~~~~l~~L~~L~L~~N~l~~~-~~~--~~l~~L~~L~Ls~N~l~~l~~~-~~~l~~L~~L~L~~N~l~-~l~~~~-~~l 236 (317)
T 3o53_A 163 ELAASSDTLEHLNLQYNFIYDV-KGQ--VVFAKLKTLDLSSNKLAFMGPE-FQSAAGVTWISLRNNKLV-LIEKAL-RFS 236 (317)
T ss_dssp GGGGGTTTCCEEECTTSCCCEE-ECC--CCCTTCCEEECCSSCCCEECGG-GGGGTTCSEEECTTSCCC-EECTTC-CCC
T ss_pred HHhhccCcCCEEECCCCcCccc-ccc--cccccCCEEECCCCcCCcchhh-hcccCcccEEECcCCccc-chhhHh-hcC
Confidence 55 3677778888887777654 322 2367778888888887765544 777788888888888777 345322 223
Q ss_pred CCCcEEEccCCcCc
Q 004248 360 TSTVELNISQNMFY 373 (766)
Q Consensus 360 ~~l~~L~ls~N~l~ 373 (766)
++|+.|++++|.+.
T Consensus 237 ~~L~~L~l~~N~~~ 250 (317)
T 3o53_A 237 QNLEHFDLRGNGFH 250 (317)
T ss_dssp TTCCEEECTTCCCB
T ss_pred CCCCEEEccCCCcc
Confidence 33444444444333
No 316
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.93 E-value=1e-26 Score=263.79 Aligned_cols=223 Identities=21% Similarity=0.260 Sum_probs=172.3
Q ss_pred CCCCEEEccCCCCCccCCcccCCCCCCcEEEeecCcCCCCCCccccCCCCCCEEEccCCCCCCCCCcccCCCCCCCEEec
Q 004248 142 PTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPSSLGQLSVLSVLDLSRNSLTGNIPTSFGLLKNLSSLDI 221 (766)
Q Consensus 142 ~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 221 (766)
++|++|+|++|.+++..|..|+++++|++|+|++|.+++..| +..+++|++|+|++|.+++..+ .++|+.|+|
T Consensus 34 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L~L 106 (487)
T 3oja_A 34 WNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETLHA 106 (487)
T ss_dssp GGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEEEC
T ss_pred CCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEEEC
Confidence 378888888888888878888888888888888888886555 8888888888888888875332 378888888
Q ss_pred cCCcCCCCCCCCCCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccC-CCCCCCEEEccCccCcc
Q 004248 222 SSNYLTGSIPPGLGTLSKLQYLNVSNNSLASSIPAQLGDLDSLVDLDLSMNSLSGSVPSELR-GLRSLQKFVIGNNFLSG 300 (766)
Q Consensus 222 s~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~l~-~l~~L~~L~ls~N~l~g 300 (766)
++|.+++..+. .+++|+.|+|++|.+++..|..++++++|++|+|++|.+++.+|..+. .+++|+.|+|++|.+++
T Consensus 107 ~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~ 183 (487)
T 3oja_A 107 ANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYD 183 (487)
T ss_dssp CSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCE
T ss_pred cCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCcccc
Confidence 88888865544 357888888888888888888888888888999999988888887775 78888888888888886
Q ss_pred ccCCCccCCCCcccEEEccCCCCCCCCCcccCCCCCCCEEEccCCCCCCCCCcccccCCCCCcEEEccCCcCccCCCcCC
Q 004248 301 NLSVNLFPTVSQLQIIVLRQNGFTGPPPDVLWSMPQLRLLDISRNNFTGPLPNSRSNVNTSTVELNISQNMFYGGLTPVL 380 (766)
Q Consensus 301 ~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~L~ls~N~l~g~~~~~l 380 (766)
..+ . ..+++|+.|+|++|++++.+|. +..+++|+.|+|++|++++ +|... . .+
T Consensus 184 ~~~-~--~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~-lp~~l-~---------------------~l 236 (487)
T 3oja_A 184 VKG-Q--VVFAKLKTLDLSSNKLAFMGPE-FQSAAGVTWISLRNNKLVL-IEKAL-R---------------------FS 236 (487)
T ss_dssp EEC-C--CCCTTCCEEECCSSCCCEECGG-GGGGTTCSEEECTTSCCCE-ECTTC-C---------------------CC
T ss_pred ccc-c--ccCCCCCEEECCCCCCCCCCHh-HcCCCCccEEEecCCcCcc-cchhh-c---------------------cC
Confidence 532 2 3477888888888888876655 7788888888888888885 45321 1 23
Q ss_pred CCCCEEeccCCcCc-cccChhh
Q 004248 381 GRFRLVDLSGNYFE-GRVPEYV 401 (766)
Q Consensus 381 ~~l~~ldLs~N~l~-g~~p~~~ 401 (766)
++|+.|++++|.+. +.+|.++
T Consensus 237 ~~L~~L~l~~N~l~c~~~~~~~ 258 (487)
T 3oja_A 237 QNLEHFDLRGNGFHCGTLRDFF 258 (487)
T ss_dssp TTCCEEECTTCCBCHHHHHHHH
T ss_pred CCCCEEEcCCCCCcCcchHHHH
Confidence 56677777777776 5555544
No 317
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.93 E-value=7.6e-27 Score=250.02 Aligned_cols=244 Identities=18% Similarity=0.188 Sum_probs=208.8
Q ss_pred CCCEEEccCCCCCccCCcccCCCCCCcEEEeecCcCCCCCCccccCCCCCCEEEccCCCCCCCCCcccCCCCCCCEEecc
Q 004248 143 TLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPSSLGQLSVLSVLDLSRNSLTGNIPTSFGLLKNLSSLDIS 222 (766)
Q Consensus 143 ~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 222 (766)
.++.++++.+.+...++..+..+++|++|+|++|++++..|..|.++++|++|+|++|++++..| |..+++|++|+|+
T Consensus 11 ~l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls 88 (317)
T 3o53_A 11 RYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLN 88 (317)
T ss_dssp EEEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECC
T ss_pred ceeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECc
Confidence 46677888888876666667788899999999999998888899999999999999999987654 9999999999999
Q ss_pred CCcCCCCCCCCCCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccCCCCCCCEEEccCccCcccc
Q 004248 223 SNYLTGSIPPGLGTLSKLQYLNVSNNSLASSIPAQLGDLDSLVDLDLSMNSLSGSVPSELRGLRSLQKFVIGNNFLSGNL 302 (766)
Q Consensus 223 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~~ 302 (766)
+|.+++. | ..++|++|++++|++++..+. .+++|++|++++|++++..|..+..+++|++|++++|.+++..
T Consensus 89 ~n~l~~l-~----~~~~L~~L~l~~n~l~~~~~~---~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 160 (317)
T 3o53_A 89 NNYVQEL-L----VGPSIETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVN 160 (317)
T ss_dssp SSEEEEE-E----ECTTCCEEECCSSCCSEEEEC---CCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEE
T ss_pred CCccccc-c----CCCCcCEEECCCCccCCcCcc---ccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCccc
Confidence 9999853 3 348999999999999876554 4678999999999999988889999999999999999999877
Q ss_pred CCCccCCCCcccEEEccCCCCCCCCCcccCCCCCCCEEEccCCCCCCCCCcccccCCCCCcEEEccCCcCccCCCc---C
Q 004248 303 SVNLFPTVSQLQIIVLRQNGFTGPPPDVLWSMPQLRLLDISRNNFTGPLPNSRSNVNTSTVELNISQNMFYGGLTP---V 379 (766)
Q Consensus 303 ~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~L~ls~N~l~g~~~~---~ 379 (766)
+..++..+++|+.|+|++|++++..+ ...+++|++|+|++|++++..| . +...++|+.|++++|.+.+ +|. .
T Consensus 161 ~~~~~~~l~~L~~L~L~~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~l~~-~-~~~l~~L~~L~L~~N~l~~-l~~~~~~ 235 (317)
T 3o53_A 161 FAELAASSDTLEHLNLQYNFIYDVKG--QVVFAKLKTLDLSSNKLAFMGP-E-FQSAAGVTWISLRNNKLVL-IEKALRF 235 (317)
T ss_dssp GGGGGGGTTTCCEEECTTSCCCEEEC--CCCCTTCCEEECCSSCCCEECG-G-GGGGTTCSEEECTTSCCCE-ECTTCCC
T ss_pred HHHHhhccCcCCEEECCCCcCccccc--ccccccCCEEECCCCcCCcchh-h-hcccCcccEEECcCCcccc-hhhHhhc
Confidence 76666678999999999999987733 3358999999999999996544 3 4567899999999999985 554 4
Q ss_pred CCCCCEEeccCCcCc-cccChhh
Q 004248 380 LGRFRLVDLSGNYFE-GRVPEYV 401 (766)
Q Consensus 380 l~~l~~ldLs~N~l~-g~~p~~~ 401 (766)
+++|+.|+|++|.++ +.+|.++
T Consensus 236 l~~L~~L~l~~N~~~~~~~~~~~ 258 (317)
T 3o53_A 236 SQNLEHFDLRGNGFHCGTLRDFF 258 (317)
T ss_dssp CTTCCEEECTTCCCBHHHHHHHH
T ss_pred CCCCCEEEccCCCccCcCHHHHH
Confidence 578999999999999 6666655
No 318
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.93 E-value=4.9e-26 Score=258.12 Aligned_cols=221 Identities=20% Similarity=0.197 Sum_probs=194.1
Q ss_pred CCCCCEEecCCCCCCCCCchhhhhCCCCCCEEEccCCCCCccCCcccCCCCCCcEEEeecCcCCCCCCccccCCCCCCEE
Q 004248 116 LTHLASFNASRFLLPGSIPDWLGQQLPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPSSLGQLSVLSVL 195 (766)
Q Consensus 116 l~~L~~L~ls~n~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L 195 (766)
.++|+.|++++|.+.+..|..+.. +++|++|+|++|.+++.+| ++.+++|++|+|++|.+++. | ..++|++|
T Consensus 33 ~~~L~~L~Ls~n~l~~~~~~~~~~-l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l-~----~~~~L~~L 104 (487)
T 3oja_A 33 AWNVKELDLSGNPLSQISAADLAP-FTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQEL-L----VGPSIETL 104 (487)
T ss_dssp GGGCCEEECCSSCCCCCCGGGGTT-CTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEE-E----ECTTCCEE
T ss_pred CCCccEEEeeCCcCCCCCHHHHhC-CCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCC-C----CCCCcCEE
Confidence 348999999999999877777765 9999999999999998776 99999999999999999853 3 23899999
Q ss_pred EccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCCCCCCCccEEEccCCCCCCCCccccC-CCCCCCEEEccCCcC
Q 004248 196 DLSRNSLTGNIPTSFGLLKNLSSLDISSNYLTGSIPPGLGTLSKLQYLNVSNNSLASSIPAQLG-DLDSLVDLDLSMNSL 274 (766)
Q Consensus 196 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~-~l~~L~~L~Ls~N~l 274 (766)
++++|.+++..+. .+++|+.|+|++|.+++..|..++++++|++|+|++|.+++.+|..+. .+++|++|+|++|.+
T Consensus 105 ~L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l 181 (487)
T 3oja_A 105 HAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFI 181 (487)
T ss_dssp ECCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCC
T ss_pred ECcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCcc
Confidence 9999999976654 468899999999999998899999999999999999999998888886 799999999999999
Q ss_pred CccCCcccCCCCCCCEEEccCccCccccCCCccCCCCcccEEEccCCCCCCCCCcccCCCCCCCEEEccCCCCC-CCCC
Q 004248 275 SGSVPSELRGLRSLQKFVIGNNFLSGNLSVNLFPTVSQLQIIVLRQNGFTGPPPDVLWSMPQLRLLDISRNNFT-GPLP 352 (766)
Q Consensus 275 ~g~~p~~l~~l~~L~~L~ls~N~l~g~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~-g~~p 352 (766)
++.. .+..+++|+.|++++|.+++..+ . |..+++|+.|+|++|.+++ +|..+..+++|+.|++++|.++ +.+|
T Consensus 182 ~~~~--~~~~l~~L~~L~Ls~N~l~~~~~-~-~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~ 255 (487)
T 3oja_A 182 YDVK--GQVVFAKLKTLDLSSNKLAFMGP-E-FQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLR 255 (487)
T ss_dssp CEEE--CCCCCTTCCEEECCSSCCCEECG-G-GGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHH
T ss_pred cccc--ccccCCCCCEEECCCCCCCCCCH-h-HcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchH
Confidence 9763 34469999999999999997544 3 5789999999999999997 5667899999999999999987 4444
No 319
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.93 E-value=2.9e-24 Score=224.46 Aligned_cols=204 Identities=25% Similarity=0.308 Sum_probs=172.5
Q ss_pred CCCEEEccCCCCCccCCcccCCCCCCcEEEeecCcCCCCCCccccCCCCCCEEEccCCCCCCCCCcccCCCCCCCEEecc
Q 004248 143 TLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPSSLGQLSVLSVLDLSRNSLTGNIPTSFGLLKNLSSLDIS 222 (766)
Q Consensus 143 ~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 222 (766)
+++++++++|.++. +|..+. ++|++|+|++|++++..+..|.++++|++|+|++|+++...+..|.++++|++|+|+
T Consensus 17 ~~~~l~~~~~~l~~-ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~ 93 (270)
T 2o6q_A 17 NKNSVDCSSKKLTA-IPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVT 93 (270)
T ss_dssp TTTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECC
T ss_pred CCCEEEccCCCCCc-cCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECC
Confidence 35678888888874 565554 689999999999998777789999999999999999997666678899999999999
Q ss_pred CCcCCCCCCCCCCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccCCCCCCCEEEccCccCcccc
Q 004248 223 SNYLTGSIPPGLGTLSKLQYLNVSNNSLASSIPAQLGDLDSLVDLDLSMNSLSGSVPSELRGLRSLQKFVIGNNFLSGNL 302 (766)
Q Consensus 223 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~~ 302 (766)
+|.+++..+..+.++++|++|+|++|++++..|..|+++++|++|+|++|++++..+..|..+++|+.|++++|.+++ +
T Consensus 94 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~ 172 (270)
T 2o6q_A 94 DNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKR-V 172 (270)
T ss_dssp SSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSC-C
T ss_pred CCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcE-e
Confidence 999997777778999999999999999998888888999999999999999997777778888999999999888875 4
Q ss_pred CCCccCCCCcccEEEccCCCCCCCCCcccCCCCCCCEEEccCCCCCCC
Q 004248 303 SVNLFPTVSQLQIIVLRQNGFTGPPPDVLWSMPQLRLLDISRNNFTGP 350 (766)
Q Consensus 303 ~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ 350 (766)
+...|..+++|+.|+|++|++++.++..+..+++|+.|+|++|.+...
T Consensus 173 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 220 (270)
T 2o6q_A 173 PEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCT 220 (270)
T ss_dssp CTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCS
T ss_pred ChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCC
Confidence 555567788888888888888887777788888888888888877643
No 320
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.93 E-value=7.9e-27 Score=267.20 Aligned_cols=181 Identities=15% Similarity=0.128 Sum_probs=143.1
Q ss_pred CccceeecCCcceEEEEEEcCCcEEEEEEeeccccC---------HHHHHHHHHHHhhcCCCCcccceeEEEecCCcEEE
Q 004248 537 SDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVK---------TEAYLLELDFFSKVSHARLVPLLGHCMERENEKFL 607 (766)
Q Consensus 537 ~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~---------~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~l 607 (766)
...++||+|+||.||+|. ..++.+|+|+....... .++|.+|++++++++|||||++..++.. +++.|+
T Consensus 339 ~~~~~LG~G~fg~Vy~~~-~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~-~~~~~l 416 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDS-YLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVD-LDNKRI 416 (540)
T ss_dssp ---------CCEEEEEEE-CSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEE-TTTTEE
T ss_pred CCCCEEeeCCCEEEEEEE-ECCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEe-CCccEE
Confidence 345789999999999994 45678999987543221 3458999999999999999976666655 456799
Q ss_pred EEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhh
Q 004248 608 VYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEV 687 (766)
Q Consensus 608 V~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a 687 (766)
|||||++|+|.+++.+ +..++.|+++||+|||++ +|+||||||+|||+++ ++||+|||++
T Consensus 417 VmE~~~ggsL~~~l~~---------------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~DFGla 476 (540)
T 3en9_A 417 MMSYINGKLAKDVIED---------------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIIDFGLG 476 (540)
T ss_dssp EEECCCSEEHHHHSTT---------------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECCCTTC
T ss_pred EEECCCCCCHHHHHHH---------------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEECccC
Confidence 9999999999999963 457899999999999998 9999999999999999 9999999999
Q ss_pred hhcCCCC----------ccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhcCCCCC
Q 004248 688 CAQGGDA----------HQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIFNNHLN 746 (766)
Q Consensus 688 ~~~~~~~----------~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~ 746 (766)
+...... ....||+.|+|||.+.....+ |+.++|+||..+-.+|.+.++.++
T Consensus 477 ~~~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~-------Y~~~~d~ws~vl~~l~~v~~r~rY 538 (540)
T 3en9_A 477 KISNLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEG-------YKSVYDRWEIILELMKDVERRARY 538 (540)
T ss_dssp EECCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHH-------HHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred EECCCccccccchhhhhhhhcCCCCcCCHHHHHHHHHH-------HHHHHhHHHHHHHHHHHHHhcccc
Confidence 8764421 245789999999988654344 477899999999999999888776
No 321
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.93 E-value=3e-25 Score=232.25 Aligned_cols=203 Identities=22% Similarity=0.282 Sum_probs=105.9
Q ss_pred CCCCcEEEeecCcCCCCCCccccCCCCCCEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCCCCCCCccEEE
Q 004248 165 LTNLTSLYLSDNGLTGTIPSSLGQLSVLSVLDLSRNSLTGNIPTSFGLLKNLSSLDISSNYLTGSIPPGLGTLSKLQYLN 244 (766)
Q Consensus 165 l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 244 (766)
+++|+.|++++|.++. + ..+..+++|++|+|++|++++ + ..+..+++|++|+|++|.+++..|..+.++++|++|+
T Consensus 40 l~~L~~L~l~~~~i~~-~-~~l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 115 (272)
T 3rfs_A 40 LNSIDQIIANNSDIKS-V-QGIQYLPNVRYLALGGNKLHD-I-SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELV 115 (272)
T ss_dssp HTTCCEEECTTSCCCC-C-TTGGGCTTCCEEECTTSCCCC-C-GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred ccceeeeeeCCCCccc-c-cccccCCCCcEEECCCCCCCC-c-hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEE
Confidence 3444444444444331 1 123444444444444444443 1 2344444444444444444444344444445555555
Q ss_pred ccCCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccCCCCCCCEEEccCccCccccCCCccCCCCcccEEEccCCCCC
Q 004248 245 VSNNSLASSIPAQLGDLDSLVDLDLSMNSLSGSVPSELRGLRSLQKFVIGNNFLSGNLSVNLFPTVSQLQIIVLRQNGFT 324 (766)
Q Consensus 245 Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~~~~~~~~~l~~L~~L~L~~N~l~ 324 (766)
|++|++++..|..++++++|++|++++|++++..+..+.++++|+.|++++|.+++ ++...|..+++|+.|++++|+++
T Consensus 116 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~L~~N~l~ 194 (272)
T 3rfs_A 116 LVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQS-LPEGVFDKLTQLKDLRLYQNQLK 194 (272)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCCS
T ss_pred CCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCc-cCHHHhcCCccCCEEECCCCcCC
Confidence 55555544444444455555555555555554444444445555555555555442 23333455566666666666666
Q ss_pred CCCCcccCCCCCCCEEEccCCCCCCCCCcccccCCCCCcEEEccCCcCccCCCcCCCCCCEEeccCCcCccccChhh
Q 004248 325 GPPPDVLWSMPQLRLLDISRNNFTGPLPNSRSNVNTSTVELNISQNMFYGGLTPVLGRFRLVDLSGNYFEGRVPEYV 401 (766)
Q Consensus 325 ~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~L~ls~N~l~g~~~~~l~~l~~ldLs~N~l~g~~p~~~ 401 (766)
+.+|..+..+++|+.|++++|.+.+..| +++.++++.|.++|.+|.++
T Consensus 195 ~~~~~~~~~l~~L~~L~l~~N~~~~~~~-----------------------------~l~~l~~~~n~~~g~ip~~~ 242 (272)
T 3rfs_A 195 SVPDGVFDRLTSLQYIWLHDNPWDCTCP-----------------------------GIRYLSEWINKHSGVVRNSA 242 (272)
T ss_dssp CCCTTTTTTCTTCCEEECCSSCBCCCTT-----------------------------TTHHHHHHHHHTGGGBBCTT
T ss_pred ccCHHHHhCCcCCCEEEccCCCccccCc-----------------------------HHHHHHHHHHhCCCcccCcc
Confidence 6666667777777777777777665443 34556666777777777665
No 322
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.93 E-value=1.2e-23 Score=243.98 Aligned_cols=254 Identities=30% Similarity=0.330 Sum_probs=210.1
Q ss_pred CCCCEEecCCCCCCCCCchhhhhCCCCCCEEEccCCCCCccCCcccCCCCCCcEEEeecCcCCCCCCccccCCCCCCEEE
Q 004248 117 THLASFNASRFLLPGSIPDWLGQQLPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPSSLGQLSVLSVLD 196 (766)
Q Consensus 117 ~~L~~L~ls~n~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~ 196 (766)
..++.|++++|.+. .+|..++ ++|++|+|++|.++. +|. .+++|++|+|++|+++ .+|. .+++|++|+
T Consensus 40 ~~l~~L~ls~n~L~-~lp~~l~---~~L~~L~L~~N~l~~-lp~---~l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~ 107 (622)
T 3g06_A 40 NGNAVLNVGESGLT-TLPDCLP---AHITTLVIPDNNLTS-LPA---LPPELRTLEVSGNQLT-SLPV---LPPGLLELS 107 (622)
T ss_dssp HCCCEEECCSSCCS-CCCSCCC---TTCSEEEECSCCCSC-CCC---CCTTCCEEEECSCCCS-CCCC---CCTTCCEEE
T ss_pred CCCcEEEecCCCcC-ccChhhC---CCCcEEEecCCCCCC-CCC---cCCCCCEEEcCCCcCC-cCCC---CCCCCCEEE
Confidence 46899999999987 8888663 799999999999984 555 6799999999999998 4676 779999999
Q ss_pred ccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCCCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCc
Q 004248 197 LSRNSLTGNIPTSFGLLKNLSSLDISSNYLTGSIPPGLGTLSKLQYLNVSNNSLASSIPAQLGDLDSLVDLDLSMNSLSG 276 (766)
Q Consensus 197 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g 276 (766)
|++|++++ +|. .+++|+.|++++|++++ +|.. +++|++|+|++|++++ +|. .+++|+.|++++|++++
T Consensus 108 Ls~N~l~~-l~~---~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~-l~~---~~~~L~~L~L~~N~l~~ 175 (622)
T 3g06_A 108 IFSNPLTH-LPA---LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLAS-LPA---LPSELCKLWAYNNQLTS 175 (622)
T ss_dssp ECSCCCCC-CCC---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC
T ss_pred CcCCcCCC-CCC---CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCCC-cCC---ccCCCCEEECCCCCCCC
Confidence 99999986 555 67899999999999985 6764 4899999999999986 454 35789999999999986
Q ss_pred cCCcccCCCCCCCEEEccCccCccccCCCccCCCCcccEEEccCCCCCCCCCcccCCCCCCCEEEccCCCCCCCCCcccc
Q 004248 277 SVPSELRGLRSLQKFVIGNNFLSGNLSVNLFPTVSQLQIIVLRQNGFTGPPPDVLWSMPQLRLLDISRNNFTGPLPNSRS 356 (766)
Q Consensus 277 ~~p~~l~~l~~L~~L~ls~N~l~g~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~ 356 (766)
+| ..+++|+.|++++|.+++ +|. .+++|+.|++++|.++..+ . .+++|+.|+|++|++++ +|
T Consensus 176 -l~---~~~~~L~~L~Ls~N~l~~-l~~----~~~~L~~L~L~~N~l~~l~-~---~~~~L~~L~Ls~N~L~~-lp---- 237 (622)
T 3g06_A 176 -LP---MLPSGLQELSVSDNQLAS-LPT----LPSELYKLWAYNNRLTSLP-A---LPSGLKELIVSGNRLTS-LP---- 237 (622)
T ss_dssp -CC---CCCTTCCEEECCSSCCSC-CCC----CCTTCCEEECCSSCCSSCC-C---CCTTCCEEECCSSCCSC-CC----
T ss_pred -Cc---ccCCCCcEEECCCCCCCC-CCC----ccchhhEEECcCCcccccC-C---CCCCCCEEEccCCccCc-CC----
Confidence 56 567899999999999985 443 3478999999999998654 3 35899999999999996 66
Q ss_pred cCCCCCcEEEccCCcCccCCCcCCCCCCEEeccCCcCccccChhhhhccc-----CCCcccCCC
Q 004248 357 NVNTSTVELNISQNMFYGGLTPVLGRFRLVDLSGNYFEGRVPEYVHSNAS-----SLDSNCLQN 415 (766)
Q Consensus 357 ~~~~~l~~L~ls~N~l~g~~~~~l~~l~~ldLs~N~l~g~~p~~~~~~~~-----~l~~n~l~~ 415 (766)
...++|+.|++++|.++ .+|..+++|+.|+|++|+|+ .+|..+. ++. ++++|.+.+
T Consensus 238 ~~l~~L~~L~Ls~N~L~-~lp~~~~~L~~L~Ls~N~L~-~lp~~l~-~l~~L~~L~L~~N~l~~ 298 (622)
T 3g06_A 238 VLPSELKELMVSGNRLT-SLPMLPSGLLSLSVYRNQLT-RLPESLI-HLSSETTVNLEGNPLSE 298 (622)
T ss_dssp CCCTTCCEEECCSSCCS-CCCCCCTTCCEEECCSSCCC-SCCGGGG-GSCTTCEEECCSCCCCH
T ss_pred CCCCcCcEEECCCCCCC-cCCcccccCcEEeCCCCCCC-cCCHHHh-hccccCEEEecCCCCCC
Confidence 34478999999999998 57778899999999999999 7887764 222 345555543
No 323
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.93 E-value=4.5e-25 Score=230.88 Aligned_cols=220 Identities=27% Similarity=0.328 Sum_probs=148.3
Q ss_pred EEecCCCCCCCCCchhhhhCCCCCCEEEccCCCCCccCCcccCCCCCCcEEEeecCcCCCCCCccccCCCCCCEEEccCC
Q 004248 121 SFNASRFLLPGSIPDWLGQQLPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPSSLGQLSVLSVLDLSRN 200 (766)
Q Consensus 121 ~L~ls~n~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N 200 (766)
.+++..+.+...++. . .+++|+.|++++|.++.. ..+..+++|++|+|++|.+++ + +.+.++++|++|+|++|
T Consensus 23 ~l~l~~~~~~~~~~~--~-~l~~L~~L~l~~~~i~~~--~~l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~~n 95 (272)
T 3rfs_A 23 KANLKKKSVTDAVTQ--N-ELNSIDQIIANNSDIKSV--QGIQYLPNVRYLALGGNKLHD-I-SALKELTNLTYLILTGN 95 (272)
T ss_dssp HHHHTCSCTTSEECH--H-HHTTCCEEECTTSCCCCC--TTGGGCTTCCEEECTTSCCCC-C-GGGTTCTTCCEEECTTS
T ss_pred HHHhcCccccccccc--c-cccceeeeeeCCCCcccc--cccccCCCCcEEECCCCCCCC-c-hhhcCCCCCCEEECCCC
Confidence 344444444433322 1 266777777777776532 246667777777777777765 2 35677777777777777
Q ss_pred CCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCCCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCccCCc
Q 004248 201 SLTGNIPTSFGLLKNLSSLDISSNYLTGSIPPGLGTLSKLQYLNVSNNSLASSIPAQLGDLDSLVDLDLSMNSLSGSVPS 280 (766)
Q Consensus 201 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~ 280 (766)
++++..|..|.++++|++|+|++|++++..|..+..+++|++|+|++|++++..|..++++++|++|++++|++++..+.
T Consensus 96 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 175 (272)
T 3rfs_A 96 QLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEG 175 (272)
T ss_dssp CCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTT
T ss_pred ccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHH
Confidence 77766666667777777777777777766666667777777777777777766666667777777777777777766666
Q ss_pred ccCCCCCCCEEEccCccCccccCCCccCCCCcccEEEccCCCCCCCCCcccCCCCCCCEEEccCCCCCCCCCccc
Q 004248 281 ELRGLRSLQKFVIGNNFLSGNLSVNLFPTVSQLQIIVLRQNGFTGPPPDVLWSMPQLRLLDISRNNFTGPLPNSR 355 (766)
Q Consensus 281 ~l~~l~~L~~L~ls~N~l~g~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~ 355 (766)
.++++++|++|++++|.+++. +...|..+++|+.|++++|.+.+. +++|+.|+++.|+++|.+|...
T Consensus 176 ~~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~~~ 242 (272)
T 3rfs_A 176 VFDKLTQLKDLRLYQNQLKSV-PDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNSA 242 (272)
T ss_dssp TTTTCTTCCEEECCSSCCSCC-CTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBCTT
T ss_pred HhcCCccCCEEECCCCcCCcc-CHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccCcc
Confidence 667777777777777777753 334456777777777777776643 4467777888888888777654
No 324
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.92 E-value=1.1e-24 Score=228.20 Aligned_cols=226 Identities=22% Similarity=0.217 Sum_probs=172.9
Q ss_pred EEEccCCCCCccCCcccCCCCCCcEEEeecCcCCCCCCccccCCCCCCEEEccCCCCCCCCCcccCCCCCCCEEeccCCc
Q 004248 146 ALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPSSLGQLSVLSVLDLSRNSLTGNIPTSFGLLKNLSSLDISSNY 225 (766)
Q Consensus 146 ~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 225 (766)
..+.++..++ .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|.++++|++|+|++|.
T Consensus 11 ~~~c~~~~l~-~ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 87 (276)
T 2z62_A 11 TYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNP 87 (276)
T ss_dssp EEECTTSCCS-SCCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred eEEecCCCcc-ccCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCc
Confidence 3445555554 3555443 579999999999997777789999999999999999998777789999999999999999
Q ss_pred CCCCCCCCCCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCcc-CCcccCCCCCCCEEEccCccCccccCC
Q 004248 226 LTGSIPPGLGTLSKLQYLNVSNNSLASSIPAQLGDLDSLVDLDLSMNSLSGS-VPSELRGLRSLQKFVIGNNFLSGNLSV 304 (766)
Q Consensus 226 l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~-~p~~l~~l~~L~~L~ls~N~l~g~~~~ 304 (766)
+++..|..+.++++|++|++++|++++..+..++++++|++|++++|++++. +|..+.++++|++|++++|.+++..+
T Consensus 88 l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~- 166 (276)
T 2z62_A 88 IQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYC- 166 (276)
T ss_dssp CCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECG-
T ss_pred cCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCH-
Confidence 9987778899999999999999999887777889999999999999999873 68888889999999999998876433
Q ss_pred CccCCCCccc----EEEccCCCCCCCCCcccCCCCCCCEEEccCCCCCCCCCcccccCCCCCcEEEccCCcCccCCCcCC
Q 004248 305 NLFPTVSQLQ----IIVLRQNGFTGPPPDVLWSMPQLRLLDISRNNFTGPLPNSRSNVNTSTVELNISQNMFYGGLTPVL 380 (766)
Q Consensus 305 ~~~~~l~~L~----~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~L~ls~N~l~g~~~~~l 380 (766)
..+..+.+|+ .|++++|++++.++..+.. .+|+.|+|++|++++..+ ..+. .+
T Consensus 167 ~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~~-~~L~~L~L~~n~l~~~~~-~~~~---------------------~l 223 (276)
T 2z62_A 167 TDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKE-IRLKELALDTNQLKSVPD-GIFD---------------------RL 223 (276)
T ss_dssp GGGHHHHTCTTCCEEEECCSSCCCEECTTSSCS-CCEEEEECCSSCCSCCCT-TTTT---------------------TC
T ss_pred HHhhhhhhccccceeeecCCCcccccCccccCC-CcccEEECCCCceeecCH-hHhc---------------------cc
Confidence 3344455555 7788888887666655543 367777777777774332 2222 24
Q ss_pred CCCCEEeccCCcCccccC
Q 004248 381 GRFRLVDLSGNYFEGRVP 398 (766)
Q Consensus 381 ~~l~~ldLs~N~l~g~~p 398 (766)
++|+.|+|++|++++..|
T Consensus 224 ~~L~~L~l~~N~~~c~c~ 241 (276)
T 2z62_A 224 TSLQKIWLHTNPWDCSCP 241 (276)
T ss_dssp CSCCEEECCSSCBCCCTT
T ss_pred ccccEEEccCCcccccCC
Confidence 556667777777776555
No 325
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.92 E-value=5.1e-25 Score=235.03 Aligned_cols=225 Identities=20% Similarity=0.190 Sum_probs=167.1
Q ss_pred CCCCCEEecCCCCCCCC----CchhhhhCCCCCCEEEccCCCCCccCCccc--CCCCCCcEEEeecCcCCCCCC----cc
Q 004248 116 LTHLASFNASRFLLPGS----IPDWLGQQLPTLQALDLRSCSISGVIPFSL--GNLTNLTSLYLSDNGLTGTIP----SS 185 (766)
Q Consensus 116 l~~L~~L~ls~n~l~g~----ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~l--~~l~~L~~L~Ls~N~l~~~~p----~~ 185 (766)
-..++.+.+..+.++.. ++..+ . +++|++|+|++|.+++..|..+ .++++|++|+|++|.+++..| ..
T Consensus 63 ~~~l~~l~l~~~~~~~~~~~~~~~~~-~-~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~ 140 (310)
T 4glp_A 63 ALRVRRLTVGAAQVPAQLLVGALRVL-A-YSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQ 140 (310)
T ss_dssp SCCCCEEEECSCCCBHHHHHHHHHHH-H-HSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHH
T ss_pred hcceeEEEEeCCcCCHHHHHHHHHhc-c-cCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHH
Confidence 33467777777665421 11222 2 5678999999999988888887 888899999999999887655 34
Q ss_pred ccCCCCCCEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCC--C--CCCCCCCCCccEEEccCCCCCCCCcc----c
Q 004248 186 LGQLSVLSVLDLSRNSLTGNIPTSFGLLKNLSSLDISSNYLTGS--I--PPGLGTLSKLQYLNVSNNSLASSIPA----Q 257 (766)
Q Consensus 186 l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~--~--p~~l~~l~~L~~L~Ls~N~l~~~~p~----~ 257 (766)
+..+++|++|+|++|++++..|..|+.+++|++|+|++|++.+. + +..++.+++|++|+|++|+++. +|. .
T Consensus 141 ~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l 219 (310)
T 4glp_A 141 QWLKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET-PTGVCAAL 219 (310)
T ss_dssp TTBCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC-HHHHHHHH
T ss_pred hhhccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc-hHHHHHHH
Confidence 55788899999999998888888888888999999999887642 2 2334678888888888888863 333 2
Q ss_pred cCCCCCCCEEEccCCcCCccCCcccCCC---CCCCEEEccCccCccccCCCccCCCCcccEEEccCCCCCCCCCcccCCC
Q 004248 258 LGDLDSLVDLDLSMNSLSGSVPSELRGL---RSLQKFVIGNNFLSGNLSVNLFPTVSQLQIIVLRQNGFTGPPPDVLWSM 334 (766)
Q Consensus 258 l~~l~~L~~L~Ls~N~l~g~~p~~l~~l---~~L~~L~ls~N~l~g~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l 334 (766)
++++++|++|+|++|++++..|..+..+ ++|++|++++|.++ .+|..++ ++|+.|+|++|++++.+ . +..+
T Consensus 220 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~---~~L~~L~Ls~N~l~~~~-~-~~~l 293 (310)
T 4glp_A 220 AAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP---AKLRVLDLSSNRLNRAP-Q-PDEL 293 (310)
T ss_dssp HHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC---SCCSCEECCSCCCCSCC-C-TTSC
T ss_pred HhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc---CCCCEEECCCCcCCCCc-h-hhhC
Confidence 4677888888888888888777777666 58888888888887 5666553 57778888888887652 2 5667
Q ss_pred CCCCEEEccCCCCCC
Q 004248 335 PQLRLLDISRNNFTG 349 (766)
Q Consensus 335 ~~L~~L~Ls~N~l~g 349 (766)
++|+.|+|++|+++.
T Consensus 294 ~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 294 PEVDNLTLDGNPFLV 308 (310)
T ss_dssp CCCSCEECSSTTTSC
T ss_pred CCccEEECcCCCCCC
Confidence 778888888887763
No 326
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.92 E-value=6.7e-24 Score=224.05 Aligned_cols=200 Identities=28% Similarity=0.318 Sum_probs=103.3
Q ss_pred CCCCCEEEccCCCCCccCCcccCCCCCCcEEEeecCcCCCCCCccccCCCCCCEEEccCCCCCCCCCcccCCCCCCCEEe
Q 004248 141 LPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPSSLGQLSVLSVLDLSRNSLTGNIPTSFGLLKNLSSLD 220 (766)
Q Consensus 141 l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 220 (766)
+++|+++++++|.++. +|..+. ++|++|+|++|.+++..|..|.++++|++|+|++|++++. |.. +.+++|+.|+
T Consensus 9 l~~l~~l~~~~~~l~~-ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~~-~~l~~L~~L~ 83 (290)
T 1p9a_G 9 VASHLEVNCDKRNLTA-LPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKL-QVD-GTLPVLGTLD 83 (290)
T ss_dssp STTCCEEECTTSCCSS-CCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEE-ECC-SCCTTCCEEE
T ss_pred cCCccEEECCCCCCCc-CCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcc-cCC-CCCCcCCEEE
Confidence 4444555555555442 232222 3455555555555544444455555555555555555432 211 4455555555
Q ss_pred ccCCcCCCCCCCCCCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccCCCCCCCEEEccCccCcc
Q 004248 221 ISSNYLTGSIPPGLGTLSKLQYLNVSNNSLASSIPAQLGDLDSLVDLDLSMNSLSGSVPSELRGLRSLQKFVIGNNFLSG 300 (766)
Q Consensus 221 Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g 300 (766)
|++|+++ .+|..+..+++|++|+|++|++++..|..|.++++|++|+|++|++++..+..|..+++|+.|++++|+++
T Consensus 84 Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~- 161 (290)
T 1p9a_G 84 LSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLT- 161 (290)
T ss_dssp CCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCS-
T ss_pred CCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCC-
Confidence 5555554 44555555555555555555555544455555555555555555555444444555555555555555554
Q ss_pred ccCCCccCCCCcccEEEccCCCCCCCCCcccCCCCCCCEEEccCCCCC
Q 004248 301 NLSVNLFPTVSQLQIIVLRQNGFTGPPPDVLWSMPQLRLLDISRNNFT 348 (766)
Q Consensus 301 ~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 348 (766)
.+|...|..+++|+.|+|++|+++ .+|..+..+++|+.|+|++|.+.
T Consensus 162 ~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~ 208 (290)
T 1p9a_G 162 ELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWL 208 (290)
T ss_dssp CCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBC
T ss_pred ccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCcc
Confidence 344444455555555555555555 33444445556666666666654
No 327
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.91 E-value=6.9e-24 Score=219.08 Aligned_cols=160 Identities=26% Similarity=0.287 Sum_probs=135.6
Q ss_pred CCCCEEEccCCCCCccCCcccCCCCCCcEEEeecCcCCCCCCccccCCCCCCEEEccCCCCCCCCCcccCCCCCCCEEec
Q 004248 142 PTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPSSLGQLSVLSVLDLSRNSLTGNIPTSFGLLKNLSSLDI 221 (766)
Q Consensus 142 ~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 221 (766)
++|+.|+|++|.+++..|..|.++++|++|+|++|.+++..|..|.++++|++|+|++|++++..|..|..+++|++|+|
T Consensus 35 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 114 (251)
T 3m19_A 35 ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYL 114 (251)
T ss_dssp TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEc
Confidence 47889999999998888888889999999999999998877888888999999999999998777778888899999999
Q ss_pred cCCcCCCCCCCCCCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccCCCCCCCEEEccCccCccc
Q 004248 222 SSNYLTGSIPPGLGTLSKLQYLNVSNNSLASSIPAQLGDLDSLVDLDLSMNSLSGSVPSELRGLRSLQKFVIGNNFLSGN 301 (766)
Q Consensus 222 s~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~ 301 (766)
++|++++..+..+..+++|++|+|++|++++..|..|+.+++|++|+|++|++++..+..+..+++|+.|++++|.+++.
T Consensus 115 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 115 GGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred CCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 99988876666678888899999999988877776788888888888888888877777788888888888888877653
No 328
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.91 E-value=1.7e-23 Score=220.92 Aligned_cols=204 Identities=28% Similarity=0.296 Sum_probs=181.0
Q ss_pred hccCCCCCEEecCCCCCCCCCchhhhhCCCCCCEEEccCCCCCccCCcccCCCCCCcEEEeecCcCCCCCCccccCCCCC
Q 004248 113 LVNLTHLASFNASRFLLPGSIPDWLGQQLPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPSSLGQLSVL 192 (766)
Q Consensus 113 l~~l~~L~~L~ls~n~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L 192 (766)
+.++++++.++++++.+. .+|..+ .++|++|+|++|.+++..|..|.++++|++|+|++|.+++. |.. ..+++|
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~ip~~~---~~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~~-~~l~~L 79 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-ALPPDL---PKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKL-QVD-GTLPVL 79 (290)
T ss_dssp EECSTTCCEEECTTSCCS-SCCSCC---CTTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEE-ECC-SCCTTC
T ss_pred ccccCCccEEECCCCCCC-cCCCCC---CCCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcc-cCC-CCCCcC
Confidence 567888999999999885 678765 36899999999999999899999999999999999999864 333 789999
Q ss_pred CEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCCCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCC
Q 004248 193 SVLDLSRNSLTGNIPTSFGLLKNLSSLDISSNYLTGSIPPGLGTLSKLQYLNVSNNSLASSIPAQLGDLDSLVDLDLSMN 272 (766)
Q Consensus 193 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N 272 (766)
++|+|++|+++ .+|..+..+++|++|+|++|++++..|..|..+++|++|+|++|++++..+..|..+++|+.|+|++|
T Consensus 80 ~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 158 (290)
T 1p9a_G 80 GTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANN 158 (290)
T ss_dssp CEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTS
T ss_pred CEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCC
Confidence 99999999998 68889999999999999999999877788999999999999999999887788899999999999999
Q ss_pred cCCccCCcccCCCCCCCEEEccCccCccccCCCccCCCCcccEEEccCCCCCC
Q 004248 273 SLSGSVPSELRGLRSLQKFVIGNNFLSGNLSVNLFPTVSQLQIIVLRQNGFTG 325 (766)
Q Consensus 273 ~l~g~~p~~l~~l~~L~~L~ls~N~l~g~~~~~~~~~l~~L~~L~L~~N~l~~ 325 (766)
++++..+..|.++++|+.|++++|.++ .+|..++ ...+|+.|+|++|.+..
T Consensus 159 ~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~-~~~~L~~l~L~~Np~~C 209 (290)
T 1p9a_G 159 NLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFF-GSHLLPFAFLHGNPWLC 209 (290)
T ss_dssp CCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTT-TTCCCSEEECCSCCBCC
T ss_pred cCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhc-ccccCCeEEeCCCCccC
Confidence 999777777899999999999999998 6777764 45689999999999864
No 329
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.90 E-value=1.4e-23 Score=215.04 Aligned_cols=196 Identities=22% Similarity=0.249 Sum_probs=136.2
Q ss_pred CCCCEEEccCCCCCccCCcccCCCCCCcEEEeecCc-CCCCCCccccCCCCCCEEEccC-CCCCCCCCcccCCCCCCCEE
Q 004248 142 PTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNG-LTGTIPSSLGQLSVLSVLDLSR-NSLTGNIPTSFGLLKNLSSL 219 (766)
Q Consensus 142 ~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~-l~~~~p~~l~~L~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L 219 (766)
++|++|+|++|++++..+..|.++++|++|+|++|+ +++..+..|.++++|++|++++ |++++..+..|.++++|++|
T Consensus 31 ~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L 110 (239)
T 2xwt_C 31 PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFL 110 (239)
T ss_dssp TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEE
T ss_pred CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEE
Confidence 478899999999998888789999999999999997 8766666888899999999998 88887767788888899999
Q ss_pred eccCCcCCCCCCCCCCCCCCcc---EEEccCC-CCCCCCccccCCCCCCC-EEEccCCcCCccCCcccCCCCCCCEEEcc
Q 004248 220 DISSNYLTGSIPPGLGTLSKLQ---YLNVSNN-SLASSIPAQLGDLDSLV-DLDLSMNSLSGSVPSELRGLRSLQKFVIG 294 (766)
Q Consensus 220 ~Ls~N~l~~~~p~~l~~l~~L~---~L~Ls~N-~l~~~~p~~l~~l~~L~-~L~Ls~N~l~g~~p~~l~~l~~L~~L~ls 294 (766)
++++|.+++ +|. +..+++|+ +|++++| ++++..+..|.++++|+ +|++++|+++ .+|......++|+.|+++
T Consensus 111 ~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~~~L~~L~L~ 187 (239)
T 2xwt_C 111 GIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNGTKLDAVYLN 187 (239)
T ss_dssp EEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTTTTTCEEEEEECT
T ss_pred eCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhhcCCCCCCEEEcC
Confidence 999988885 665 77777777 8888888 77766666677777777 7777777776 333322222455555555
Q ss_pred Ccc-CccccCCCccCCC-CcccEEEccCCCCCCCCCcccCCCCCCCEEEccC
Q 004248 295 NNF-LSGNLSVNLFPTV-SQLQIIVLRQNGFTGPPPDVLWSMPQLRLLDISR 344 (766)
Q Consensus 295 ~N~-l~g~~~~~~~~~l-~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~ 344 (766)
+|. ++ .++...|..+ ++|+.|++++|++++.++. .+++|+.|++++
T Consensus 188 ~n~~l~-~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~---~~~~L~~L~l~~ 235 (239)
T 2xwt_C 188 KNKYLT-VIDKDAFGGVYSGPSLLDVSQTSVTALPSK---GLEHLKELIARN 235 (239)
T ss_dssp TCTTCC-EECTTTTTTCSBCCSEEECTTCCCCCCCCT---TCTTCSEEECTT
T ss_pred CCCCcc-cCCHHHhhccccCCcEEECCCCccccCChh---HhccCceeeccC
Confidence 552 44 3333344444 4555555555555443332 334444444443
No 330
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.90 E-value=5e-27 Score=264.53 Aligned_cols=66 Identities=32% Similarity=0.333 Sum_probs=27.6
Q ss_pred ccCCCCCEEecCCCCCCCCCchhhhhCCC----CCCEEEccCCCCCc----cCCcccCCCCCCcEEEeecCcCC
Q 004248 114 VNLTHLASFNASRFLLPGSIPDWLGQQLP----TLQALDLRSCSISG----VIPFSLGNLTNLTSLYLSDNGLT 179 (766)
Q Consensus 114 ~~l~~L~~L~ls~n~l~g~ip~~~~~~l~----~L~~L~Ls~N~l~g----~~p~~l~~l~~L~~L~Ls~N~l~ 179 (766)
..+++|++|++++|.+.+..+..+...++ +|++|+|++|.++. .+|..+.++++|++|+|++|.++
T Consensus 53 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~ 126 (461)
T 1z7x_W 53 RVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLG 126 (461)
T ss_dssp HTCTTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCH
T ss_pred HhCCCcCEEeCCCCcCChHHHHHHHHHHhhCCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCc
Confidence 33444444444444443322323322233 34444444444442 23444444444444444444443
No 331
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.90 E-value=5.7e-24 Score=226.87 Aligned_cols=224 Identities=17% Similarity=0.144 Sum_probs=145.3
Q ss_pred CCCCCEEEccCCCCCccCCc---ccCCCCCCcEEEeecCcCCCCCCccc--cCCCCCCEEEccCCCCCCCCC----cccC
Q 004248 141 LPTLQALDLRSCSISGVIPF---SLGNLTNLTSLYLSDNGLTGTIPSSL--GQLSVLSVLDLSRNSLTGNIP----TSFG 211 (766)
Q Consensus 141 l~~L~~L~Ls~N~l~g~~p~---~l~~l~~L~~L~Ls~N~l~~~~p~~l--~~L~~L~~L~Ls~N~l~~~~p----~~~~ 211 (766)
-..++.|++.++.++...-. .+..+++|++|+|++|.+++..|..+ .++++|++|+|++|++++..| ..+.
T Consensus 63 ~~~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~ 142 (310)
T 4glp_A 63 ALRVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQW 142 (310)
T ss_dssp SCCCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTT
T ss_pred hcceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhh
Confidence 34578888888877532110 12234668999999999888888887 888889999999998887655 3455
Q ss_pred CCCCCCEEeccCCcCCCCCCCCCCCCCCccEEEccCCCCCCC--C--ccccCCCCCCCEEEccCCcCCccCCc----ccC
Q 004248 212 LLKNLSSLDISSNYLTGSIPPGLGTLSKLQYLNVSNNSLASS--I--PAQLGDLDSLVDLDLSMNSLSGSVPS----ELR 283 (766)
Q Consensus 212 ~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~--~--p~~l~~l~~L~~L~Ls~N~l~g~~p~----~l~ 283 (766)
.+++|++|+|++|.+++..|..++.+++|++|+|++|++.+. + +..++.+++|++|+|++|+++. +|. .++
T Consensus 143 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~ 221 (310)
T 4glp_A 143 LKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET-PTGVCAALAA 221 (310)
T ss_dssp BCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC-HHHHHHHHHH
T ss_pred hccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc-hHHHHHHHHh
Confidence 788888888888888877777888888888888888887642 2 2234677788888888887762 222 235
Q ss_pred CCCCCCEEEccCccCccccCCCccCCCCcccEEEccCCCCCCCCCcccCCC---CCCCEEEccCCCCCCCCCcccccCCC
Q 004248 284 GLRSLQKFVIGNNFLSGNLSVNLFPTVSQLQIIVLRQNGFTGPPPDVLWSM---PQLRLLDISRNNFTGPLPNSRSNVNT 360 (766)
Q Consensus 284 ~l~~L~~L~ls~N~l~g~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l---~~L~~L~Ls~N~l~g~~p~~~~~~~~ 360 (766)
++++|++|++++|.+++..|.. +..+ ++|++|+|++|+++ .+|... .+
T Consensus 222 ~l~~L~~L~Ls~N~l~~~~p~~-------------------------~~~~~~~~~L~~L~Ls~N~l~-~lp~~~---~~ 272 (310)
T 4glp_A 222 AGVQPHSLDLSHNSLRATVNPS-------------------------APRCMWSSALNSLNLSFAGLE-QVPKGL---PA 272 (310)
T ss_dssp HTCCCSSEECTTSCCCCCCCSC-------------------------CSSCCCCTTCCCEECCSSCCC-SCCSCC---CS
T ss_pred cCCCCCEEECCCCCCCccchhh-------------------------HHhccCcCcCCEEECCCCCCC-chhhhh---cC
Confidence 5566666666666665544433 3332 34555555555554 334322 13
Q ss_pred CCcEEEccCCcCcc-CCCcCCCCCCEEeccCCcCc
Q 004248 361 STVELNISQNMFYG-GLTPVLGRFRLVDLSGNYFE 394 (766)
Q Consensus 361 ~l~~L~ls~N~l~g-~~~~~l~~l~~ldLs~N~l~ 394 (766)
+|+.|++++|.+++ ..+..+++|+.|+|++|+|+
T Consensus 273 ~L~~L~Ls~N~l~~~~~~~~l~~L~~L~L~~N~l~ 307 (310)
T 4glp_A 273 KLRVLDLSSNRLNRAPQPDELPEVDNLTLDGNPFL 307 (310)
T ss_dssp CCSCEECCSCCCCSCCCTTSCCCCSCEECSSTTTS
T ss_pred CCCEEECCCCcCCCCchhhhCCCccEEECcCCCCC
Confidence 45555555555554 33445667777777777775
No 332
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.90 E-value=5.7e-26 Score=244.91 Aligned_cols=212 Identities=21% Similarity=0.266 Sum_probs=126.9
Q ss_pred CCCCccceeecCCCEEEEEcCCCCcCCCCCCCCccchhhhccC--CCCCEEecCCCCCCCCCchhhhhCCCCCCEEEccC
Q 004248 74 PCLVWNGVRCQNGSVVGINISGFRRTRLGSQNPRFAADALVNL--THLASFNASRFLLPGSIPDWLGQQLPTLQALDLRS 151 (766)
Q Consensus 74 ~C~~W~gv~C~~~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l--~~L~~L~ls~n~l~g~ip~~~~~~l~~L~~L~Ls~ 151 (766)
.|..|.++.|+...+..+++++... .+..+..+ ++++.|++++|.+.+..|.. + .+++|++|+|++
T Consensus 35 vc~~W~~~~~~~~~~~~l~l~~~~~----------~~~~~~~~~~~~l~~L~l~~n~l~~~~~~~-~-~~~~L~~L~L~~ 102 (336)
T 2ast_B 35 VCKRWYRLASDESLWQTLDLTGKNL----------HPDVTGRLLSQGVIAFRCPRSFMDQPLAEH-F-SPFRVQHMDLSN 102 (336)
T ss_dssp SCHHHHHHHTCSTTSSEEECTTCBC----------CHHHHHHHHHTTCSEEECTTCEECSCCCSC-C-CCBCCCEEECTT
T ss_pred HHHHHHHHhcCchhheeeccccccC----------CHHHHHhhhhccceEEEcCCccccccchhh-c-cCCCCCEEEccC
Confidence 4668999988755577777765321 12234444 56666666666666555542 2 266666666666
Q ss_pred CCCCcc-CCcccCCCCCCcEEEeecCcCCCCCCccccCCCCCCEEEccCC-CCCC-CCCcccCCCCCCCEEeccCC-cCC
Q 004248 152 CSISGV-IPFSLGNLTNLTSLYLSDNGLTGTIPSSLGQLSVLSVLDLSRN-SLTG-NIPTSFGLLKNLSSLDISSN-YLT 227 (766)
Q Consensus 152 N~l~g~-~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N-~l~~-~~p~~~~~l~~L~~L~Ls~N-~l~ 227 (766)
|.+++. +|..+..+++|++|+|++|.+++..|..++++++|++|+|++| .+++ .+|..+.++++|++|+|++| .++
T Consensus 103 ~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~ 182 (336)
T 2ast_B 103 SVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFT 182 (336)
T ss_dssp CEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCC
T ss_pred CCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcC
Confidence 666554 5556666666666666666666556666666666666666666 4554 24555556666666666666 555
Q ss_pred CC-CCCCCCCCC-CccEEEccCC--CCC-CCCccccCCCCCCCEEEccCCc-CCccCCcccCCCCCCCEEEccCcc
Q 004248 228 GS-IPPGLGTLS-KLQYLNVSNN--SLA-SSIPAQLGDLDSLVDLDLSMNS-LSGSVPSELRGLRSLQKFVIGNNF 297 (766)
Q Consensus 228 ~~-~p~~l~~l~-~L~~L~Ls~N--~l~-~~~p~~l~~l~~L~~L~Ls~N~-l~g~~p~~l~~l~~L~~L~ls~N~ 297 (766)
+. ++..+..++ +|++|++++| .++ +.+|..+.++++|++|++++|. +++..+..+..+++|++|++++|.
T Consensus 183 ~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~ 258 (336)
T 2ast_B 183 EKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCY 258 (336)
T ss_dssp HHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCT
T ss_pred hHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCC
Confidence 32 344455566 6666666666 343 3344455556666666666666 555555555666666666666553
No 333
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.90 E-value=2.9e-23 Score=212.67 Aligned_cols=197 Identities=22% Similarity=0.252 Sum_probs=170.7
Q ss_pred CCCcEEEeecCcCCCCCCccccCCCCCCEEEccCCC-CCCCCCcccCCCCCCCEEeccC-CcCCCCCCCCCCCCCCccEE
Q 004248 166 TNLTSLYLSDNGLTGTIPSSLGQLSVLSVLDLSRNS-LTGNIPTSFGLLKNLSSLDISS-NYLTGSIPPGLGTLSKLQYL 243 (766)
Q Consensus 166 ~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~l~~l~~L~~L 243 (766)
++|++|+|++|++++..+..|.++++|++|++++|+ +++..+..|.++++|++|+|++ |.+++..+..|.++++|++|
T Consensus 31 ~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L 110 (239)
T 2xwt_C 31 PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFL 110 (239)
T ss_dssp TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEE
T ss_pred CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEE
Confidence 389999999999998777789999999999999997 8876677899999999999999 99997767789999999999
Q ss_pred EccCCCCCCCCccccCCCCCCC---EEEccCC-cCCccCCcccCCCCCCC-EEEccCccCccccCCCccCCCCcccEEEc
Q 004248 244 NVSNNSLASSIPAQLGDLDSLV---DLDLSMN-SLSGSVPSELRGLRSLQ-KFVIGNNFLSGNLSVNLFPTVSQLQIIVL 318 (766)
Q Consensus 244 ~Ls~N~l~~~~p~~l~~l~~L~---~L~Ls~N-~l~g~~p~~l~~l~~L~-~L~ls~N~l~g~~~~~~~~~l~~L~~L~L 318 (766)
++++|++++ +|. +..+++|+ +|++++| ++++..+..|.++++|+ .|++++|.++ .+|...|.. ++|+.|+|
T Consensus 111 ~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~-~~L~~L~L 186 (239)
T 2xwt_C 111 GIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNG-TKLDAVYL 186 (239)
T ss_dssp EEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTTTTT-CEEEEEEC
T ss_pred eCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhhcCC-CCCCEEEc
Confidence 999999987 676 88889998 9999999 99987778899999999 9999999998 788777776 89999999
Q ss_pred cCCC-CCCCCCcccCCC-CCCCEEEccCCCCCCCCCcccccCCCCCcEEEccCC
Q 004248 319 RQNG-FTGPPPDVLWSM-PQLRLLDISRNNFTGPLPNSRSNVNTSTVELNISQN 370 (766)
Q Consensus 319 ~~N~-l~~~~p~~l~~l-~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~L~ls~N 370 (766)
++|+ +++.++..|..+ ++|+.||+++|++++ +|.. ...+++.|+++++
T Consensus 187 ~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~-l~~~---~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 187 NKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTA-LPSK---GLEHLKELIARNT 236 (239)
T ss_dssp TTCTTCCEECTTTTTTCSBCCSEEECTTCCCCC-CCCT---TCTTCSEEECTTC
T ss_pred CCCCCcccCCHHHhhccccCCcEEECCCCcccc-CChh---HhccCceeeccCc
Confidence 9995 998888889999 999999999999984 5532 3345555555543
No 334
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.89 E-value=2.7e-22 Score=207.07 Aligned_cols=180 Identities=22% Similarity=0.299 Sum_probs=112.3
Q ss_pred CCCEEEccCCCCCccCCcccCCCCCCcEEEeecCcCCCCCCccccCCCCCCEEEccCCCCCCCCCcccCCCCCCCEEecc
Q 004248 143 TLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPSSLGQLSVLSVLDLSRNSLTGNIPTSFGLLKNLSSLDIS 222 (766)
Q Consensus 143 ~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 222 (766)
..++++++++.++ .+|..+. ++|+.|+|++|++++..|..|.++++|++|+|++|++++..|..|.++++|++|+|+
T Consensus 15 ~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 91 (251)
T 3m19_A 15 GKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLA 91 (251)
T ss_dssp GGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECT
T ss_pred CCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECC
Confidence 4567777777776 3444443 466666776666666666666666666666666666666555566666666666666
Q ss_pred CCcCCCCCCCCCCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccCCCCCCCEEEccCccCcccc
Q 004248 223 SNYLTGSIPPGLGTLSKLQYLNVSNNSLASSIPAQLGDLDSLVDLDLSMNSLSGSVPSELRGLRSLQKFVIGNNFLSGNL 302 (766)
Q Consensus 223 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~~ 302 (766)
+|.+++..+..|..+++|++|+|++|++++..+..+..+++|++|+|++|++++..+..
T Consensus 92 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~--------------------- 150 (251)
T 3m19_A 92 NNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGA--------------------- 150 (251)
T ss_dssp TSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTT---------------------
T ss_pred CCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHH---------------------
Confidence 66666555555556666666666666665544444555555555555555555433333
Q ss_pred CCCccCCCCcccEEEccCCCCCCCCCcccCCCCCCCEEEccCCCCCCC
Q 004248 303 SVNLFPTVSQLQIIVLRQNGFTGPPPDVLWSMPQLRLLDISRNNFTGP 350 (766)
Q Consensus 303 ~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ 350 (766)
|..+++|+.|+|++|++++.++..+..+++|+.|+|++|++++.
T Consensus 151 ----~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 151 ----FDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp ----TTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred ----cCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 34555566666666666666666777777888888888887765
No 335
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.89 E-value=3.6e-26 Score=257.52 Aligned_cols=303 Identities=20% Similarity=0.174 Sum_probs=230.1
Q ss_pred CCEEEEEcCCCCcCCCCCCCCccchhh-hccCC----CCCEEecCCCCCCC----CCchhhhhCCCCCCEEEccCCCCCc
Q 004248 86 GSVVGINISGFRRTRLGSQNPRFAADA-LVNLT----HLASFNASRFLLPG----SIPDWLGQQLPTLQALDLRSCSISG 156 (766)
Q Consensus 86 ~~v~~l~l~~~~~~~~~~~~~~~~~~~-l~~l~----~L~~L~ls~n~l~g----~ip~~~~~~l~~L~~L~Ls~N~l~g 156 (766)
.+++.+++++..... ..+.. ...+. +|++|++++|.+.. .+|..+.. +++|++|+|++|.+++
T Consensus 56 ~~L~~L~Ls~n~l~~-------~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~-~~~L~~L~Ls~n~i~~ 127 (461)
T 1z7x_W 56 PALAELNLRSNELGD-------VGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRT-LPTLQELHLSDNLLGD 127 (461)
T ss_dssp TTCCEEECTTCCCHH-------HHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHHHHHHHTTS-CTTCCEEECCSSBCHH
T ss_pred CCcCEEeCCCCcCCh-------HHHHHHHHHHhhCCCceeEEEccCCCCCHHHHHHHHHHHcc-CCceeEEECCCCcCch
Confidence 457788888754211 01112 22344 69999999999874 56777654 9999999999999976
Q ss_pred cCCccc-----CCCCCCcEEEeecCcCCCC----CCccccCCCCCCEEEccCCCCCCCCCcccC-----CCCCCCEEecc
Q 004248 157 VIPFSL-----GNLTNLTSLYLSDNGLTGT----IPSSLGQLSVLSVLDLSRNSLTGNIPTSFG-----LLKNLSSLDIS 222 (766)
Q Consensus 157 ~~p~~l-----~~l~~L~~L~Ls~N~l~~~----~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~-----~l~~L~~L~Ls 222 (766)
..+..+ ...++|++|+|++|++++. ++..+..+++|++|+|++|.++...+..+. .+++|+.|+|+
T Consensus 128 ~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~ 207 (461)
T 1z7x_W 128 AGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLE 207 (461)
T ss_dssp HHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECT
T ss_pred HHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEcc
Confidence 544433 3367899999999999864 366677889999999999998765444443 36799999999
Q ss_pred CCcCCCC----CCCCCCCCCCccEEEccCCCCCCCC-----ccccCCCCCCCEEEccCCcCCcc----CCcccCCCCCCC
Q 004248 223 SNYLTGS----IPPGLGTLSKLQYLNVSNNSLASSI-----PAQLGDLDSLVDLDLSMNSLSGS----VPSELRGLRSLQ 289 (766)
Q Consensus 223 ~N~l~~~----~p~~l~~l~~L~~L~Ls~N~l~~~~-----p~~l~~l~~L~~L~Ls~N~l~g~----~p~~l~~l~~L~ 289 (766)
+|.+++. ++..+..+++|++|++++|.++... +..+..+++|++|++++|++++. ++..+..+++|+
T Consensus 208 ~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~ 287 (461)
T 1z7x_W 208 SCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLK 287 (461)
T ss_dssp TSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCC
T ss_pred CCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcc
Confidence 9999864 5677788999999999999987532 23344689999999999999864 677788899999
Q ss_pred EEEccCccCccccC----CCccCCCCcccEEEccCCCCCCC----CCcccCCCCCCCEEEccCCCCCCCCCcccc----c
Q 004248 290 KFVIGNNFLSGNLS----VNLFPTVSQLQIIVLRQNGFTGP----PPDVLWSMPQLRLLDISRNNFTGPLPNSRS----N 357 (766)
Q Consensus 290 ~L~ls~N~l~g~~~----~~~~~~l~~L~~L~L~~N~l~~~----~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~----~ 357 (766)
+|++++|.+++..+ ..+....++|+.|++++|.+++. ++..+..+++|++||+++|++++..+.... .
T Consensus 288 ~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~ 367 (461)
T 1z7x_W 288 ELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQ 367 (461)
T ss_dssp EEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTS
T ss_pred eEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcC
Confidence 99999999864322 22223446899999999999876 566777889999999999999864332221 1
Q ss_pred CCCCCcEEEccCCcCcc----CCCc---CCCCCCEEeccCCcCccc
Q 004248 358 VNTSTVELNISQNMFYG----GLTP---VLGRFRLVDLSGNYFEGR 396 (766)
Q Consensus 358 ~~~~l~~L~ls~N~l~g----~~~~---~l~~l~~ldLs~N~l~g~ 396 (766)
..+.|+.|++++|.+++ .+|. .+++|+.|||++|++++.
T Consensus 368 ~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~~ 413 (461)
T 1z7x_W 368 PGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDA 413 (461)
T ss_dssp TTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCHH
T ss_pred CCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCCHH
Confidence 25689999999999986 5554 368999999999999865
No 336
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.89 E-value=1.3e-24 Score=234.28 Aligned_cols=220 Identities=19% Similarity=0.210 Sum_probs=154.7
Q ss_pred CCCEEecCCCCCCCCCchhhhhCC--CCCCEEEccCCCCCccCCcccCCCCCCcEEEeecCcCCCC-CCccccCCCCCCE
Q 004248 118 HLASFNASRFLLPGSIPDWLGQQL--PTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGT-IPSSLGQLSVLSV 194 (766)
Q Consensus 118 ~L~~L~ls~n~l~g~ip~~~~~~l--~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~-~p~~l~~L~~L~~ 194 (766)
.++.++++++.+. |..+.. + ++++.|++++|.+.+..+. +.++++|++|+|++|.+++. +|..+.++++|++
T Consensus 48 ~~~~l~l~~~~~~---~~~~~~-~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~ 122 (336)
T 2ast_B 48 LWQTLDLTGKNLH---PDVTGR-LLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQN 122 (336)
T ss_dssp TSSEEECTTCBCC---HHHHHH-HHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSE
T ss_pred hheeeccccccCC---HHHHHh-hhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCE
Confidence 3677888887765 444433 5 7888888888888877665 55688888888888887755 7777788888888
Q ss_pred EEccCCCCCCCCCcccCCCCCCCEEeccCC-cCCCC-CCCCCCCCCCccEEEccCC-CCCCC-CccccCCCC-CCCEEEc
Q 004248 195 LDLSRNSLTGNIPTSFGLLKNLSSLDISSN-YLTGS-IPPGLGTLSKLQYLNVSNN-SLASS-IPAQLGDLD-SLVDLDL 269 (766)
Q Consensus 195 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N-~l~~~-~p~~l~~l~~L~~L~Ls~N-~l~~~-~p~~l~~l~-~L~~L~L 269 (766)
|+|++|.+++..|..++.+++|++|+|++| .+++. +|..+.++++|++|++++| .+++. ++..+..++ +|++|++
T Consensus 123 L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l 202 (336)
T 2ast_B 123 LSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNL 202 (336)
T ss_dssp EECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEEC
T ss_pred EeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEe
Confidence 888888887777777888888888888888 56642 5555667778888888888 77653 456667777 8888888
Q ss_pred cCC--cCC-ccCCcccCCCCCCCEEEccCcc-CccccCCCccCCCCcccEEEccCCCCCCCCCc---ccCCCCCCCEEEc
Q 004248 270 SMN--SLS-GSVPSELRGLRSLQKFVIGNNF-LSGNLSVNLFPTVSQLQIIVLRQNGFTGPPPD---VLWSMPQLRLLDI 342 (766)
Q Consensus 270 s~N--~l~-g~~p~~l~~l~~L~~L~ls~N~-l~g~~~~~~~~~l~~L~~L~L~~N~l~~~~p~---~l~~l~~L~~L~L 342 (766)
++| .++ +.+|..+.++++|+.|++++|. +++..+.. +..+++|+.|++++|. +..+. .+.++++|+.|++
T Consensus 203 ~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~-l~~l~~L~~L~l~~~~--~~~~~~~~~l~~~~~L~~L~l 279 (336)
T 2ast_B 203 SGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQE-FFQLNYLQHLSLSRCY--DIIPETLLELGEIPTLKTLQV 279 (336)
T ss_dssp CSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGG-GGGCTTCCEEECTTCT--TCCGGGGGGGGGCTTCCEEEC
T ss_pred CCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHH-HhCCCCCCEeeCCCCC--CCCHHHHHHHhcCCCCCEEec
Confidence 887 455 4556666677777777777777 55444433 3556677777777764 22222 4556666777776
Q ss_pred cCC
Q 004248 343 SRN 345 (766)
Q Consensus 343 s~N 345 (766)
++|
T Consensus 280 ~~~ 282 (336)
T 2ast_B 280 FGI 282 (336)
T ss_dssp TTS
T ss_pred cCc
Confidence 666
No 337
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.89 E-value=4.5e-24 Score=224.21 Aligned_cols=152 Identities=11% Similarity=0.058 Sum_probs=120.7
Q ss_pred HHHHHHHhCCCCccceeecCCcceEEEEEEcCCcEEEEEEeecccc-------------------CHHHHHHHHHHHhhc
Q 004248 526 YQQLLAATGDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSV-------------------KTEAYLLELDFFSKV 586 (766)
Q Consensus 526 ~~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~-------------------~~~~~~~E~~~l~~l 586 (766)
...+......|...+.||+|+||.||+|...+|+.||||.++.... ...++.+|+++|+++
T Consensus 82 l~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l 161 (282)
T 1zar_A 82 LHRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKL 161 (282)
T ss_dssp HHHHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhc
Confidence 3445555566778899999999999999998899999999964321 234689999999999
Q ss_pred CCCCcccceeEEEecCCcEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCC
Q 004248 587 SHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDV 666 (766)
Q Consensus 587 ~H~niv~l~~~~~~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDl 666 (766)
+ | +++.+++.. +..|+|||||++|+|.+ +.. .+...++.|++.||+|||+. +||||||
T Consensus 162 ~--~-~~v~~~~~~--~~~~lvmE~~~g~~L~~-l~~-------------~~~~~i~~qi~~~l~~lH~~---giiHrDl 219 (282)
T 1zar_A 162 Q--G-LAVPKVYAW--EGNAVLMELIDAKELYR-VRV-------------ENPDEVLDMILEEVAKFYHR---GIVHGDL 219 (282)
T ss_dssp T--T-SSSCCEEEE--ETTEEEEECCCCEEGGG-CCC-------------SCHHHHHHHHHHHHHHHHHT---TEECSCC
T ss_pred c--C-CCcCeEEec--cceEEEEEecCCCcHHH-cch-------------hhHHHHHHHHHHHHHHHHHC---CCEeCCC
Confidence 9 5 677774433 45799999999999998 521 12346999999999999998 9999999
Q ss_pred CCCCeeeCCCCcEEeccchhhhhcCCCCccceeeecccCCCCCC
Q 004248 667 QASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQSSE 710 (766)
Q Consensus 667 Kp~NILl~~~~~~kl~DFG~a~~~~~~~~~~~~t~~y~aPe~~~ 710 (766)
||+|||++ ++.+||+|||+|+.. ..++|||.+.
T Consensus 220 kp~NILl~-~~~vkl~DFG~a~~~----------~~~~a~e~l~ 252 (282)
T 1zar_A 220 SQYNVLVS-EEGIWIIDFPQSVEV----------GEEGWREILE 252 (282)
T ss_dssp STTSEEEE-TTEEEECCCTTCEET----------TSTTHHHHHH
T ss_pred CHHHEEEE-CCcEEEEECCCCeEC----------CCCCHHHHHH
Confidence 99999999 999999999998643 3456666543
No 338
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.88 E-value=5e-25 Score=240.46 Aligned_cols=228 Identities=18% Similarity=0.213 Sum_probs=161.4
Q ss_pred EEecCCCCCCCCCchhhhhCCCCCCEEEccCCCCCccCC----cccCCCC-CCcEEEeecCcCCCCCCccccCC-----C
Q 004248 121 SFNASRFLLPGSIPDWLGQQLPTLQALDLRSCSISGVIP----FSLGNLT-NLTSLYLSDNGLTGTIPSSLGQL-----S 190 (766)
Q Consensus 121 ~L~ls~n~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p----~~l~~l~-~L~~L~Ls~N~l~~~~p~~l~~L-----~ 190 (766)
.++++.|.++|.+|..+.. .++|++|||++|.+++..+ ..+.+++ +|++|+|++|++++..+..+..+ +
T Consensus 2 ~~~ls~n~~~~~~~~~~~~-~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~ 80 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSI-PHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPA 80 (362)
T ss_dssp EEECCCCTTCCHHHHHHTS-CTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCT
T ss_pred ccccccccchHHHHHHHhC-CCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCC
Confidence 4577888888888876643 5669999999998887766 6777888 89999999998887777777665 8
Q ss_pred CCCEEEccCCCCCCCCCcccC----CC-CCCCEEeccCCcCCCCCCCC----CCC-CCCccEEEccCCCCCCCCc----c
Q 004248 191 VLSVLDLSRNSLTGNIPTSFG----LL-KNLSSLDISSNYLTGSIPPG----LGT-LSKLQYLNVSNNSLASSIP----A 256 (766)
Q Consensus 191 ~L~~L~Ls~N~l~~~~p~~~~----~l-~~L~~L~Ls~N~l~~~~p~~----l~~-l~~L~~L~Ls~N~l~~~~p----~ 256 (766)
+|++|+|++|++++..+..+. .+ ++|+.|+|++|.+++..+.. +.. .++|++|+|++|.++...+ .
T Consensus 81 ~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~ 160 (362)
T 3goz_A 81 NVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQ 160 (362)
T ss_dssp TCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHH
T ss_pred CccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHH
Confidence 889999999988876666443 34 78888888888887654433 333 3588888888888875433 3
Q ss_pred ccCCCC-CCCEEEccCCcCCccCCccc----CCC-CCCCEEEccCccCccc----cCCCccCCCCcccEEEccCCCCCCC
Q 004248 257 QLGDLD-SLVDLDLSMNSLSGSVPSEL----RGL-RSLQKFVIGNNFLSGN----LSVNLFPTVSQLQIIVLRQNGFTGP 326 (766)
Q Consensus 257 ~l~~l~-~L~~L~Ls~N~l~g~~p~~l----~~l-~~L~~L~ls~N~l~g~----~~~~~~~~l~~L~~L~L~~N~l~~~ 326 (766)
.+..++ +|++|+|++|++++..+..+ ..+ ++|++|++++|.+++. ++..+....++|+.|+|++|.+++.
T Consensus 161 ~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~ 240 (362)
T 3goz_A 161 ILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGP 240 (362)
T ss_dssp HHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCC
T ss_pred HHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcH
Confidence 334454 88888888888877666443 344 5888888888887652 2222222235777788888877766
Q ss_pred CC----cccCCCCCCCEEEccCCCCCC
Q 004248 327 PP----DVLWSMPQLRLLDISRNNFTG 349 (766)
Q Consensus 327 ~p----~~l~~l~~L~~L~Ls~N~l~g 349 (766)
.+ ..+..+++|+.|+|++|.+.+
T Consensus 241 ~~~~l~~~~~~l~~L~~L~L~~n~l~~ 267 (362)
T 3goz_A 241 SLENLKLLKDSLKHLQTVYLDYDIVKN 267 (362)
T ss_dssp CHHHHHHTTTTTTTCSEEEEEHHHHTT
T ss_pred HHHHHHHHHhcCCCccEEEeccCCccc
Confidence 54 334566777777777777553
No 339
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.88 E-value=2.2e-22 Score=201.48 Aligned_cols=133 Identities=28% Similarity=0.296 Sum_probs=71.9
Q ss_pred CCCEEEccCCCCCccCCcccCCCCCCcEEEeecCcCCCCCCccccCCCCCCEEEccCCCCCCCCCcccCCCCCCCEEecc
Q 004248 143 TLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPSSLGQLSVLSVLDLSRNSLTGNIPTSFGLLKNLSSLDIS 222 (766)
Q Consensus 143 ~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 222 (766)
+|++|+|++|.+++..+..|.++++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|.++++|++|+|+
T Consensus 29 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 108 (208)
T 2o6s_A 29 QTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALN 108 (208)
T ss_dssp TCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcC
Confidence 45566666666655544455555666666666665554444445555555555555555554444445555555555555
Q ss_pred CCcCCCCCCCCCCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCcCC
Q 004248 223 SNYLTGSIPPGLGTLSKLQYLNVSNNSLASSIPAQLGDLDSLVDLDLSMNSLS 275 (766)
Q Consensus 223 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 275 (766)
+|++++..+..+.++++|++|+|++|++++..+..+..+++|++|++++|.+.
T Consensus 109 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 161 (208)
T 2o6s_A 109 TNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWD 161 (208)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBC
T ss_pred CCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCee
Confidence 55555444444555555555555555555444444455555555555555443
No 340
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.88 E-value=4e-25 Score=243.37 Aligned_cols=240 Identities=20% Similarity=0.240 Sum_probs=138.5
Q ss_pred hhccCCCCCEEecCCCCCCCCCchhhh---hCCCCCCEEEccCC---CCCccCCccc-------CCCCCCcEEEeecCcC
Q 004248 112 ALVNLTHLASFNASRFLLPGSIPDWLG---QQLPTLQALDLRSC---SISGVIPFSL-------GNLTNLTSLYLSDNGL 178 (766)
Q Consensus 112 ~l~~l~~L~~L~ls~n~l~g~ip~~~~---~~l~~L~~L~Ls~N---~l~g~~p~~l-------~~l~~L~~L~Ls~N~l 178 (766)
.+..+++|+.|++++|.+.+..+..+. ..+++|++|+|++| .+++.+|..+ .++++|++|+|++|.+
T Consensus 27 ~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l 106 (386)
T 2ca6_A 27 VLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAF 106 (386)
T ss_dssp HHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCC
T ss_pred HHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcC
Confidence 455667777777777766654333321 13667777777764 3445555444 5667777777777777
Q ss_pred CC----CCCccccCCCCCCEEEccCCCCCCCCCcccC----CC---------CCCCEEeccCCcCC-CCCC---CCCCCC
Q 004248 179 TG----TIPSSLGQLSVLSVLDLSRNSLTGNIPTSFG----LL---------KNLSSLDISSNYLT-GSIP---PGLGTL 237 (766)
Q Consensus 179 ~~----~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~----~l---------~~L~~L~Ls~N~l~-~~~p---~~l~~l 237 (766)
++ .+|..+.++++|++|+|++|.++...+..+. .+ ++|++|+|++|+++ +.+| ..+..+
T Consensus 107 ~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~ 186 (386)
T 2ca6_A 107 GPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSH 186 (386)
T ss_dssp CTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhC
Confidence 65 3566666677777777777776533332222 22 66777777777665 3333 244556
Q ss_pred CCccEEEccCCCCC--C---CCccccCCCCCCCEEEccCCcCC----ccCCcccCCCCCCCEEEccCccCccc----cCC
Q 004248 238 SKLQYLNVSNNSLA--S---SIPAQLGDLDSLVDLDLSMNSLS----GSVPSELRGLRSLQKFVIGNNFLSGN----LSV 304 (766)
Q Consensus 238 ~~L~~L~Ls~N~l~--~---~~p~~l~~l~~L~~L~Ls~N~l~----g~~p~~l~~l~~L~~L~ls~N~l~g~----~~~ 304 (766)
++|++|+|++|+++ | .+|..+..+++|++|+|++|.++ +.+|..+..+++|++|++++|.+++. ++.
T Consensus 187 ~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~ 266 (386)
T 2ca6_A 187 RLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVD 266 (386)
T ss_dssp TTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHH
T ss_pred CCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHH
Confidence 66666777666665 2 23335566666666666666664 45566666666666666666666543 221
Q ss_pred Cc-cCCCCcccEEEccCCCCCC----CCCccc-CCCCCCCEEEccCCCCCCCC
Q 004248 305 NL-FPTVSQLQIIVLRQNGFTG----PPPDVL-WSMPQLRLLDISRNNFTGPL 351 (766)
Q Consensus 305 ~~-~~~l~~L~~L~L~~N~l~~----~~p~~l-~~l~~L~~L~Ls~N~l~g~~ 351 (766)
.+ ...+++|+.|+|++|.+++ .+|..+ .++++|++|++++|++++..
T Consensus 267 ~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~ 319 (386)
T 2ca6_A 267 AFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEED 319 (386)
T ss_dssp HHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTS
T ss_pred HHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcch
Confidence 11 0124555566666666555 244444 44555566666655555443
No 341
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.88 E-value=2.2e-22 Score=214.35 Aligned_cols=192 Identities=26% Similarity=0.397 Sum_probs=135.9
Q ss_pred CCCCCEEEccCCCCCccCCcccCCCCCCcEEEeecCcCCCCCCccccCCCCCCEEEccCCCCCCCCCcccCCCCCCCEEe
Q 004248 141 LPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPSSLGQLSVLSVLDLSRNSLTGNIPTSFGLLKNLSSLD 220 (766)
Q Consensus 141 l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 220 (766)
+++|++|++++|.++. +| .+..+++|++|+|++|.+++. +. +.++++|++|+|++|++++ +| .+..+++|+.|+
T Consensus 40 l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~-~~-~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~ 113 (308)
T 1h6u_A 40 LDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDL-AP-LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTLD 113 (308)
T ss_dssp HHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEE
T ss_pred cCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCC-hh-HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEEE
Confidence 6677777777777764 33 467777777777777777643 33 7777777777777777765 33 577777777777
Q ss_pred ccCCcCCCCCCCCCCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccCCCCCCCEEEccCccCcc
Q 004248 221 ISSNYLTGSIPPGLGTLSKLQYLNVSNNSLASSIPAQLGDLDSLVDLDLSMNSLSGSVPSELRGLRSLQKFVIGNNFLSG 300 (766)
Q Consensus 221 Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g 300 (766)
|++|.+++ +|. +..+++|++|++++|.+++..+ ++.+++|++|++++|++++..+ +..+++|+.|++++|.+++
T Consensus 114 l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~ 187 (308)
T 1h6u_A 114 LTSTQITD-VTP-LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKISD 187 (308)
T ss_dssp CTTSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC
T ss_pred CCCCCCCC-chh-hcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCccCc
Confidence 77777765 333 6777777777777777765433 6677777777777777775333 7777777777777777765
Q ss_pred ccCCCccCCCCcccEEEccCCCCCCCCCcccCCCCCCCEEEccCCCCCC
Q 004248 301 NLSVNLFPTVSQLQIIVLRQNGFTGPPPDVLWSMPQLRLLDISRNNFTG 349 (766)
Q Consensus 301 ~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g 349 (766)
..+ +..+++|+.|+|++|++++.+| +..+++|+.|++++|++++
T Consensus 188 ~~~---l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 188 ISP---LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp CGG---GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEEC
T ss_pred Chh---hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeeec
Confidence 333 4667778888888888876653 7778888888888888874
No 342
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.88 E-value=5.4e-25 Score=242.28 Aligned_cols=244 Identities=17% Similarity=0.178 Sum_probs=147.6
Q ss_pred CCchhhhhCCCCCCEEEccCCCCCccC----CcccCCCCCCcEEEeecC---cCCCCCCccc-------cCCCCCCEEEc
Q 004248 132 SIPDWLGQQLPTLQALDLRSCSISGVI----PFSLGNLTNLTSLYLSDN---GLTGTIPSSL-------GQLSVLSVLDL 197 (766)
Q Consensus 132 ~ip~~~~~~l~~L~~L~Ls~N~l~g~~----p~~l~~l~~L~~L~Ls~N---~l~~~~p~~l-------~~L~~L~~L~L 197 (766)
.++..+.. +++|++|+|++|.+++.. +..+..+++|++|+|++| ++++.+|..+ .++++|++|+|
T Consensus 23 ~l~~~l~~-~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~L 101 (386)
T 2ca6_A 23 SVFAVLLE-DDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRL 101 (386)
T ss_dssp TTSHHHHH-CSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEEC
T ss_pred HHHHHHhc-CCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEEC
Confidence 35666655 888999999999888653 344778888888888885 4445556554 67788888888
Q ss_pred cCCCCCC----CCCcccCCCCCCCEEeccCCcCCCCCCCC----CCCC---------CCccEEEccCCCCC-CCCc---c
Q 004248 198 SRNSLTG----NIPTSFGLLKNLSSLDISSNYLTGSIPPG----LGTL---------SKLQYLNVSNNSLA-SSIP---A 256 (766)
Q Consensus 198 s~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~----l~~l---------~~L~~L~Ls~N~l~-~~~p---~ 256 (766)
++|.+++ .+|..+..+++|++|+|++|.++...+.. +..+ ++|++|+|++|+++ +.+| .
T Consensus 102 s~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~ 181 (386)
T 2ca6_A 102 SDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAK 181 (386)
T ss_dssp CSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHH
T ss_pred CCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHH
Confidence 8888876 36667777788888888888775332222 2222 66777777777765 3333 3
Q ss_pred ccCCCCCCCEEEccCCcCC--c---cCCcccCCCCCCCEEEccCccCc----cccCCCccCCCCcccEEEccCCCCCCC-
Q 004248 257 QLGDLDSLVDLDLSMNSLS--G---SVPSELRGLRSLQKFVIGNNFLS----GNLSVNLFPTVSQLQIIVLRQNGFTGP- 326 (766)
Q Consensus 257 ~l~~l~~L~~L~Ls~N~l~--g---~~p~~l~~l~~L~~L~ls~N~l~----g~~~~~~~~~l~~L~~L~L~~N~l~~~- 326 (766)
.+..+++|++|+|++|+++ | .+|..+..+++|+.|++++|.++ +.++. .+..+++|+.|+|++|.+++.
T Consensus 182 ~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~-~l~~~~~L~~L~L~~n~i~~~~ 260 (386)
T 2ca6_A 182 TFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAI-ALKSWPNLRELGLNDCLLSARG 260 (386)
T ss_dssp HHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHH-HGGGCTTCCEEECTTCCCCHHH
T ss_pred HHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHH-HHccCCCcCEEECCCCCCchhh
Confidence 4555666777777777665 2 23335556666666666666654 23332 123444455555555555443
Q ss_pred ---CCccc--CCCCCCCEEEccCCCCCC----CCCcccccCCCCCcEEEccCCcCccCCCcCCCCCCEEeccCCcCcccc
Q 004248 327 ---PPDVL--WSMPQLRLLDISRNNFTG----PLPNSRSNVNTSTVELNISQNMFYGGLTPVLGRFRLVDLSGNYFEGRV 397 (766)
Q Consensus 327 ---~p~~l--~~l~~L~~L~Ls~N~l~g----~~p~~~~~~~~~l~~L~ls~N~l~g~~~~~l~~l~~ldLs~N~l~g~~ 397 (766)
+|..+ +.+++|++|+|++|++++ .+|.... ..+++|+.|+|++|++++..
T Consensus 261 ~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~---------------------~~l~~L~~L~l~~N~l~~~~ 319 (386)
T 2ca6_A 261 AAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVID---------------------EKMPDLLFLELNGNRFSEED 319 (386)
T ss_dssp HHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHH---------------------HHCTTCCEEECTTSBSCTTS
T ss_pred HHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHH---------------------hcCCCceEEEccCCcCCcch
Confidence 23333 224445555555444443 1222111 12577888888888888766
Q ss_pred C
Q 004248 398 P 398 (766)
Q Consensus 398 p 398 (766)
|
T Consensus 320 ~ 320 (386)
T 2ca6_A 320 D 320 (386)
T ss_dssp H
T ss_pred h
Confidence 5
No 343
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.88 E-value=5.5e-22 Score=211.29 Aligned_cols=198 Identities=29% Similarity=0.419 Sum_probs=166.4
Q ss_pred hccCCCCCEEecCCCCCCCCCchhhhhCCCCCCEEEccCCCCCccCCcccCCCCCCcEEEeecCcCCCCCCccccCCCCC
Q 004248 113 LVNLTHLASFNASRFLLPGSIPDWLGQQLPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPSSLGQLSVL 192 (766)
Q Consensus 113 l~~l~~L~~L~ls~n~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L 192 (766)
..++++|+.|++++|.+.. +| .+.. +++|++|+|++|.+++..+ +.++++|++|+|++|++++ +| .+.++++|
T Consensus 37 ~~~l~~L~~L~l~~~~i~~-l~-~~~~-l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L 109 (308)
T 1h6u_A 37 QADLDGITTLSAFGTGVTT-IE-GVQY-LNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKN-VS-AIAGLQSI 109 (308)
T ss_dssp HHHHHTCCEEECTTSCCCC-CT-TGGG-CTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSC-CG-GGTTCTTC
T ss_pred HHHcCCcCEEEeeCCCccC-ch-hhhc-cCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCC-ch-hhcCCCCC
Confidence 4467788999999988754 66 4544 9999999999999987655 8999999999999999985 34 68899999
Q ss_pred CEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCCCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCC
Q 004248 193 SVLDLSRNSLTGNIPTSFGLLKNLSSLDISSNYLTGSIPPGLGTLSKLQYLNVSNNSLASSIPAQLGDLDSLVDLDLSMN 272 (766)
Q Consensus 193 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N 272 (766)
++|+|++|++++ +|. +..+++|+.|+|++|.+++.. . +..+++|++|+|++|++++..+ +..+++|++|++++|
T Consensus 110 ~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~-~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n 183 (308)
T 1h6u_A 110 KTLDLTSTQITD-VTP-LAGLSNLQVLYLDLNQITNIS-P-LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDN 183 (308)
T ss_dssp CEEECTTSCCCC-CGG-GTTCTTCCEEECCSSCCCCCG-G-GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSS
T ss_pred CEEECCCCCCCC-chh-hcCCCCCCEEECCCCccCcCc-c-ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCC
Confidence 999999999986 443 899999999999999998643 3 8899999999999999986443 889999999999999
Q ss_pred cCCccCCcccCCCCCCCEEEccCccCccccCCCccCCCCcccEEEccCCCCCCCCC
Q 004248 273 SLSGSVPSELRGLRSLQKFVIGNNFLSGNLSVNLFPTVSQLQIIVLRQNGFTGPPP 328 (766)
Q Consensus 273 ~l~g~~p~~l~~l~~L~~L~ls~N~l~g~~~~~~~~~l~~L~~L~L~~N~l~~~~p 328 (766)
++++..+ +..+++|++|++++|.+++..+ +..+++|+.|+|++|.+++.+.
T Consensus 184 ~l~~~~~--l~~l~~L~~L~L~~N~l~~~~~---l~~l~~L~~L~l~~N~i~~~~~ 234 (308)
T 1h6u_A 184 KISDISP--LASLPNLIEVHLKNNQISDVSP---LANTSNLFIVTLTNQTITNQPV 234 (308)
T ss_dssp CCCCCGG--GGGCTTCCEEECTTSCCCBCGG---GTTCTTCCEEEEEEEEEECCCE
T ss_pred ccCcChh--hcCCCCCCEEEccCCccCcccc---ccCCCCCCEEEccCCeeecCCe
Confidence 9986544 8889999999999999986553 5788999999999999987543
No 344
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.87 E-value=1.9e-22 Score=231.08 Aligned_cols=189 Identities=28% Similarity=0.386 Sum_probs=116.5
Q ss_pred CCEEecCCCCCCCCCchhhhhCCCCCCEEEccCCCCCccCCcccCCCCCCcEEEeecCcCCCCCCccccCCCCCCEEEcc
Q 004248 119 LASFNASRFLLPGSIPDWLGQQLPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPSSLGQLSVLSVLDLS 198 (766)
Q Consensus 119 L~~L~ls~n~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls 198 (766)
|+.|++++|.+.+ +|..+ +++|++|+|++|.|+ .+| ..+++|++|+|++|+|++ +|. +.+ +|++|+|+
T Consensus 61 L~~L~Ls~n~L~~-lp~~l---~~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls 128 (571)
T 3cvr_A 61 FSELQLNRLNLSS-LPDNL---PPQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVD 128 (571)
T ss_dssp CSEEECCSSCCSC-CCSCC---CTTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECC
T ss_pred ccEEEeCCCCCCc-cCHhH---cCCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECC
Confidence 4445555555554 66544 356777777777777 455 446777777777777775 565 554 67777777
Q ss_pred CCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCCCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCccC
Q 004248 199 RNSLTGNIPTSFGLLKNLSSLDISSNYLTGSIPPGLGTLSKLQYLNVSNNSLASSIPAQLGDLDSLVDLDLSMNSLSGSV 278 (766)
Q Consensus 199 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~ 278 (766)
+|++++ +|. .+++|+.|+|++|.+++ +|. .+++|++|+|++|++++ +|. +. ++|+.|+|++|+|+ .+
T Consensus 129 ~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~l 195 (571)
T 3cvr_A 129 NNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SL 195 (571)
T ss_dssp SSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SC
T ss_pred CCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-ch
Confidence 777765 555 46677777777777764 554 45667777777777665 555 44 66666666666666 44
Q ss_pred CcccCCCCCCCEEEccCccCccccCCCccCCCCcccEEEccCCCCCCCCCcccCCCCCCCEEEccCCCCCCCCCcc
Q 004248 279 PSELRGLRSLQKFVIGNNFLSGNLSVNLFPTVSQLQIIVLRQNGFTGPPPDVLWSMPQLRLLDISRNNFTGPLPNS 354 (766)
Q Consensus 279 p~~l~~l~~L~~L~ls~N~l~g~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~ 354 (766)
|. +.. +| +.....|+.|+|++|+|+. +|..+..+++|+.|+|++|++++.+|..
T Consensus 196 p~-~~~--~L------------------~~~~~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~L~~N~l~~~~p~~ 249 (571)
T 3cvr_A 196 PA-VPV--RN------------------HHSEETEIFFRCRENRITH-IPENILSLDPTCTIILEDNPLSSRIRES 249 (571)
T ss_dssp CC-CC----------------------------CCEEEECCSSCCCC-CCGGGGGSCTTEEEECCSSSCCHHHHHH
T ss_pred hh-HHH--hh------------------hcccccceEEecCCCccee-cCHHHhcCCCCCEEEeeCCcCCCcCHHH
Confidence 43 322 22 1112234677777777764 4555556777777777777777766643
No 345
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.87 E-value=2.5e-24 Score=234.84 Aligned_cols=256 Identities=18% Similarity=0.178 Sum_probs=202.4
Q ss_pred EEEccCCCCCccCCcccCCCCCCcEEEeecCcCCCCCC----ccccCCC-CCCEEEccCCCCCCCCCcccCCC-----CC
Q 004248 146 ALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIP----SSLGQLS-VLSVLDLSRNSLTGNIPTSFGLL-----KN 215 (766)
Q Consensus 146 ~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p----~~l~~L~-~L~~L~Ls~N~l~~~~p~~~~~l-----~~ 215 (766)
+++|+.|.++|.+|..+...++|++|+|++|.+++..+ ..+.+++ +|++|+|++|++++..+..+..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 47899999999999988888889999999999997766 7788898 99999999999998878777765 99
Q ss_pred CCEEeccCCcCCCCCCCCC----CCC-CCccEEEccCCCCCCCCcccc----CC-CCCCCEEEccCCcCCccC----Ccc
Q 004248 216 LSSLDISSNYLTGSIPPGL----GTL-SKLQYLNVSNNSLASSIPAQL----GD-LDSLVDLDLSMNSLSGSV----PSE 281 (766)
Q Consensus 216 L~~L~Ls~N~l~~~~p~~l----~~l-~~L~~L~Ls~N~l~~~~p~~l----~~-l~~L~~L~Ls~N~l~g~~----p~~ 281 (766)
|++|+|++|.+++..+..+ ..+ ++|++|+|++|++++..+..+ .. .++|++|+|++|++++.. +..
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~ 161 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQI 161 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHH
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHH
Confidence 9999999999987666544 344 899999999999987766554 34 369999999999998643 344
Q ss_pred cCCCC-CCCEEEccCccCccccCCCc---cCCC-CcccEEEccCCCCCCC----CCcccCC-CCCCCEEEccCCCCCCCC
Q 004248 282 LRGLR-SLQKFVIGNNFLSGNLSVNL---FPTV-SQLQIIVLRQNGFTGP----PPDVLWS-MPQLRLLDISRNNFTGPL 351 (766)
Q Consensus 282 l~~l~-~L~~L~ls~N~l~g~~~~~~---~~~l-~~L~~L~L~~N~l~~~----~p~~l~~-l~~L~~L~Ls~N~l~g~~ 351 (766)
+..++ +|++|++++|.+++..+..+ +... ++|+.|+|++|+++.. ++..+.. .++|++|||++|++++..
T Consensus 162 l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~ 241 (362)
T 3goz_A 162 LAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPS 241 (362)
T ss_dssp HHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCC
T ss_pred HhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHH
Confidence 55665 99999999999986544221 2334 5999999999999874 3445555 469999999999998654
Q ss_pred Cc---ccccCCCCCcEEEccCCcCccC----------CCcCCCCCCEEeccCCcCccccChhh
Q 004248 352 PN---SRSNVNTSTVELNISQNMFYGG----------LTPVLGRFRLVDLSGNYFEGRVPEYV 401 (766)
Q Consensus 352 p~---~~~~~~~~l~~L~ls~N~l~g~----------~~~~l~~l~~ldLs~N~l~g~~p~~~ 401 (766)
+. .....+..|+.|++++|.+.+. ..+.+++|+.||+++|++.+..|..+
T Consensus 242 ~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~~~~~~ 304 (362)
T 3goz_A 242 LENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSHSIPI 304 (362)
T ss_dssp HHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGGGCHHH
T ss_pred HHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCcchHHH
Confidence 42 2234567899999999985432 12356778899999999988766544
No 346
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.87 E-value=1.4e-21 Score=195.54 Aligned_cols=181 Identities=23% Similarity=0.227 Sum_probs=145.3
Q ss_pred CEEEccCCCCCccCCcccCCCCCCcEEEeecCcCCCCCCccccCCCCCCEEEccCCCCCCCCCcccCCCCCCCEEeccCC
Q 004248 145 QALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPSSLGQLSVLSVLDLSRNSLTGNIPTSFGLLKNLSSLDISSN 224 (766)
Q Consensus 145 ~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 224 (766)
+.++.+++.++. +|..+ .++|++|+|++|++++..+..+.++++|++|+|++|++++..+..|..+++|++|+|++|
T Consensus 10 ~~v~c~~~~l~~-~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 86 (208)
T 2o6s_A 10 TTVECYSQGRTS-VPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTN 86 (208)
T ss_dssp TEEECCSSCCSS-CCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCccC-CCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCC
Confidence 467777777764 44333 468899999999998766677888999999999999998776667888999999999999
Q ss_pred cCCCCCCCCCCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccCCCCCCCEEEccCccCccccCC
Q 004248 225 YLTGSIPPGLGTLSKLQYLNVSNNSLASSIPAQLGDLDSLVDLDLSMNSLSGSVPSELRGLRSLQKFVIGNNFLSGNLSV 304 (766)
Q Consensus 225 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~~~~ 304 (766)
.+++..+..+.++++|++|+|++|++++..+..+.++++|++|++++|++++..+..+..+++|+.|++++|.+.+
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~---- 162 (208)
T 2o6s_A 87 QLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC---- 162 (208)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC----
T ss_pred cCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeec----
Confidence 9987666667889999999999999987777778888999999999999887766678888888888888887753
Q ss_pred CccCCCCcccEEEccCCCCCCCCCcccCCCCC
Q 004248 305 NLFPTVSQLQIIVLRQNGFTGPPPDVLWSMPQ 336 (766)
Q Consensus 305 ~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~ 336 (766)
.+++|+.|+++.|+++|.+|.+++.++.
T Consensus 163 ----~~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 163 ----TCPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp ----CTTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred ----CCCCHHHHHHHHHhCCceeeccCccccC
Confidence 3456777778888888888877766654
No 347
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.87 E-value=1.5e-21 Score=223.71 Aligned_cols=186 Identities=25% Similarity=0.350 Sum_probs=105.5
Q ss_pred CCCEEEccCCCCCccCCcccCCCCCCcEEEeecCcCCCCCCccccCCCCCCEEEccCCCCCCCCCcccCCCCCCCEEecc
Q 004248 143 TLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPSSLGQLSVLSVLDLSRNSLTGNIPTSFGLLKNLSSLDIS 222 (766)
Q Consensus 143 ~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 222 (766)
+|+.|+|++|.+++ +|..+. ++|++|+|++|+|+ .+| ..+++|++|+|++|+|++ +|. +.+ +|+.|+|+
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls 128 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVD 128 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECC
T ss_pred CccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECC
Confidence 55666666666554 444332 45555555555555 344 234555555555555554 444 333 55555555
Q ss_pred CCcCCCCCCCCCCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccCCCCCCCEEEccCccCcccc
Q 004248 223 SNYLTGSIPPGLGTLSKLQYLNVSNNSLASSIPAQLGDLDSLVDLDLSMNSLSGSVPSELRGLRSLQKFVIGNNFLSGNL 302 (766)
Q Consensus 223 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~~ 302 (766)
+|.+++ +|. .+++|++|+|++|++++ +|. .+++|++|+|++|+ +++ +
T Consensus 129 ~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~------------------------L~~-l 175 (571)
T 3cvr_A 129 NNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQ------------------------LTF-L 175 (571)
T ss_dssp SSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSC------------------------CSC-C
T ss_pred CCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCC------------------------CCC-c
Confidence 555554 343 34455555555555543 333 33444455555544 443 3
Q ss_pred CCCccCCCCcccEEEccCCCCCCCCCcccCC-----CCCCCEEEccCCCCCCCCCcccccCCCCCcEEEccCCcCccCCC
Q 004248 303 SVNLFPTVSQLQIIVLRQNGFTGPPPDVLWS-----MPQLRLLDISRNNFTGPLPNSRSNVNTSTVELNISQNMFYGGLT 377 (766)
Q Consensus 303 ~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~-----l~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~L~ls~N~l~g~~~ 377 (766)
|. |. ++|+.|+|++|+|+. +|. +.. .+.|+.|+|++|+|+ .+|..... +++|+.|++++|.+++.+|
T Consensus 176 p~--l~--~~L~~L~Ls~N~L~~-lp~-~~~~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~-l~~L~~L~L~~N~l~~~~p 247 (571)
T 3cvr_A 176 PE--LP--ESLEALDVSTNLLES-LPA-VPVRNHHSEETEIFFRCRENRIT-HIPENILS-LDPTCTIILEDNPLSSRIR 247 (571)
T ss_dssp CC--CC--TTCCEEECCSSCCSS-CCC-CC--------CCEEEECCSSCCC-CCCGGGGG-SCTTEEEECCSSSCCHHHH
T ss_pred ch--hh--CCCCEEECcCCCCCc-hhh-HHHhhhcccccceEEecCCCcce-ecCHHHhc-CCCCCEEEeeCCcCCCcCH
Confidence 33 22 455555566665553 233 332 233499999999999 68876654 8899999999999999887
Q ss_pred cCC
Q 004248 378 PVL 380 (766)
Q Consensus 378 ~~l 380 (766)
..+
T Consensus 248 ~~l 250 (571)
T 3cvr_A 248 ESL 250 (571)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
No 348
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.87 E-value=2.7e-21 Score=209.80 Aligned_cols=214 Identities=18% Similarity=0.122 Sum_probs=148.8
Q ss_pred CCchhhhhCCCCCCEEEccCCCCCccCCcccCCCCCCcEEEeecCcCCCCCC-ccccCCCCCCE-EEccCCCCCCCCCcc
Q 004248 132 SIPDWLGQQLPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIP-SSLGQLSVLSV-LDLSRNSLTGNIPTS 209 (766)
Q Consensus 132 ~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p-~~l~~L~~L~~-L~Ls~N~l~~~~p~~ 209 (766)
.||..+ .+++++|+|++|+|+...+..|.++++|++|+|++|++.+.+| ..|.++++|+. +.++.|+++...|..
T Consensus 23 ~iP~~l---~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~ 99 (350)
T 4ay9_X 23 EIPSDL---PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEA 99 (350)
T ss_dssp SCCTTC---CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTS
T ss_pred ccCcCc---CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchh
Confidence 455544 3578999999999987767789999999999999999877665 46788888765 667778998877888
Q ss_pred cCCCCCCCEEeccCCcCCCCCCCCCCCCCCccEEEccC-CCCCCCCccccCCCC-CCCEEEccCCcCCccCCcccCCCCC
Q 004248 210 FGLLKNLSSLDISSNYLTGSIPPGLGTLSKLQYLNVSN-NSLASSIPAQLGDLD-SLVDLDLSMNSLSGSVPSELRGLRS 287 (766)
Q Consensus 210 ~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~-N~l~~~~p~~l~~l~-~L~~L~Ls~N~l~g~~p~~l~~l~~ 287 (766)
|..+++|++|++++|+++...+..+....++..|++.+ |++....+..|..+. .|+.|+|++|+++. +|.......+
T Consensus 100 f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~-i~~~~f~~~~ 178 (350)
T 4ay9_X 100 FQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQE-IHNSAFNGTQ 178 (350)
T ss_dssp BCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCE-ECTTSSTTEE
T ss_pred hhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccC-CChhhccccc
Confidence 99999999999999999876666677777888888865 456544445555553 57778888888874 4444334556
Q ss_pred CCEEEccCccCccccCCCccCCCCcccEEEccCCCCCCCCCcccCCCCCCCEEEccCCCCCCCCC
Q 004248 288 LQKFVIGNNFLSGNLSVNLFPTVSQLQIIVLRQNGFTGPPPDVLWSMPQLRLLDISRNNFTGPLP 352 (766)
Q Consensus 288 L~~L~ls~N~l~g~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p 352 (766)
|+.+++++|+..+.+|...|..+++|+.|+|++|+|+..++..+ .+|+.|.+.+++--..+|
T Consensus 179 L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~---~~L~~L~~l~~~~l~~lP 240 (350)
T 4ay9_X 179 LDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGL---ENLKKLRARSTYNLKKLP 240 (350)
T ss_dssp EEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSC---TTCCEEECTTCTTCCCCC
T ss_pred hhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhh---ccchHhhhccCCCcCcCC
Confidence 77777765444446666666666777777777777766555443 334444443333223444
No 349
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.86 E-value=1e-20 Score=205.34 Aligned_cols=240 Identities=20% Similarity=0.178 Sum_probs=193.5
Q ss_pred CEEEccCCCCCccCCcccCCCCCCcEEEeecCcCCCCCCccccCCCCCCEEEccCCCCCCCCC-cccCCCCCCCE-Eecc
Q 004248 145 QALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPSSLGQLSVLSVLDLSRNSLTGNIP-TSFGLLKNLSS-LDIS 222 (766)
Q Consensus 145 ~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~-L~Ls 222 (766)
++++-++++++ .+|..+ .+++++|+|++|+|+...+..|.++++|++|+|++|++.+.+| ..|.++++|+. +.++
T Consensus 12 ~~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~ 88 (350)
T 4ay9_X 12 RVFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 88 (350)
T ss_dssp TEEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEE
T ss_pred CEEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhccc
Confidence 57888999998 567666 3689999999999996555689999999999999999977666 46889998775 6677
Q ss_pred CCcCCCCCCCCCCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccC-CcCCccCCcccCCCC-CCCEEEccCccCcc
Q 004248 223 SNYLTGSIPPGLGTLSKLQYLNVSNNSLASSIPAQLGDLDSLVDLDLSM-NSLSGSVPSELRGLR-SLQKFVIGNNFLSG 300 (766)
Q Consensus 223 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~-N~l~g~~p~~l~~l~-~L~~L~ls~N~l~g 300 (766)
.|+++...|..|..+++|++|++++|+++...+..+....++..|++.+ |++....+..|..+. .++.|++++|.++
T Consensus 89 ~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~- 167 (350)
T 4ay9_X 89 ANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQ- 167 (350)
T ss_dssp ETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCC-
T ss_pred CCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhcccccccc-
Confidence 8999987788999999999999999999987777777778889999966 567665566777765 6889999999998
Q ss_pred ccCCCccCCCCcccEEEccC-CCCCCCCCcccCCCCCCCEEEccCCCCCCCCCcccccCCCCCcEEEccCCcCccCCCc-
Q 004248 301 NLSVNLFPTVSQLQIIVLRQ-NGFTGPPPDVLWSMPQLRLLDISRNNFTGPLPNSRSNVNTSTVELNISQNMFYGGLTP- 378 (766)
Q Consensus 301 ~~~~~~~~~l~~L~~L~L~~-N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~L~ls~N~l~g~~~~- 378 (766)
.++...|. ..+|+.|++++ |.++..+++.|..+++|+.|||++|+|+ .+|.. ....+..|.+.++.-...+|+
T Consensus 168 ~i~~~~f~-~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~-~lp~~---~~~~L~~L~~l~~~~l~~lP~l 242 (350)
T 4ay9_X 168 EIHNSAFN-GTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIH-SLPSY---GLENLKKLRARSTYNLKKLPTL 242 (350)
T ss_dssp EECTTSST-TEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCC-CCCSS---SCTTCCEEECTTCTTCCCCCCT
T ss_pred CCChhhcc-ccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcC-ccChh---hhccchHhhhccCCCcCcCCCc
Confidence 56766664 46899999975 6777777778999999999999999999 56643 345677787766655556663
Q ss_pred -CCCCCCEEeccCCcC
Q 004248 379 -VLGRFRLVDLSGNYF 393 (766)
Q Consensus 379 -~l~~l~~ldLs~N~l 393 (766)
.+.+|+.++++++..
T Consensus 243 ~~l~~L~~l~l~~~~~ 258 (350)
T 4ay9_X 243 EKLVALMEASLTYPSH 258 (350)
T ss_dssp TTCCSCCEEECSCHHH
T ss_pred hhCcChhhCcCCCCcc
Confidence 578899999976654
No 350
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.84 E-value=1.5e-22 Score=239.96 Aligned_cols=224 Identities=22% Similarity=0.210 Sum_probs=98.9
Q ss_pred CHHHHHHHHHHHHhCCC----CCCCCCCCCCCCCCccceeecCCCEEEEEcCCCCcCCCCCCCCccchhhhccCCCCCEE
Q 004248 47 SRTELAALFELRSSLGL----RRRDWPRKVDPCLVWNGVRCQNGSVVGINISGFRRTRLGSQNPRFAADALVNLTHLASF 122 (766)
Q Consensus 47 ~~~~~~aLl~~k~~l~~----~~~~W~~~~~~C~~W~gv~C~~~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~~L~~L 122 (766)
...++++|+++...... ....|.....+++.|.++++.+.+++.++|.+..... .....|+.+
T Consensus 130 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~L~~n~~~~-------------~~~~~l~~l 196 (727)
T 4b8c_D 130 VDCTKQALMEMADTLTDSKTAKKQQPTGDSTPSGTATNSAVSTPLTPKIELFANGKDE-------------ANQALLQHK 196 (727)
T ss_dssp --CCCHHHHHHHHHHHHHHTTC----------------------------------------------------------
T ss_pred cccchhhhhhhhhhcccccCcccCCCcCCCCccccCCCceecCCccceEEeeCCCCCc-------------chhhHhhcC
Confidence 34567889999876631 2245654445566899999988888888876543211 011223334
Q ss_pred ecCCCCCCCCCchhhhhCCCCCCEEEccCCCCCccCCcccCCCCCCcEEEeecCcCCCCCCccccCCCCCCEEEccCCCC
Q 004248 123 NASRFLLPGSIPDWLGQQLPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPSSLGQLSVLSVLDLSRNSL 202 (766)
Q Consensus 123 ~ls~n~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l 202 (766)
+|+.|.+ ..++++.|.+. ..|..+..+++|+.|+|++|.+. .+|..+.++++|++|+|++|.|
T Consensus 197 ~Ls~~~i---------------~~~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l 259 (727)
T 4b8c_D 197 KLSQYSI---------------DEDDDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSL 259 (727)
T ss_dssp -----------------------------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCC
T ss_pred ccCcccc---------------cCcccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcC
Confidence 4444322 23344455544 44566666777777777777766 5666666677777777777777
Q ss_pred CCCCCcccCCCCCCCEEeccCCcCCCCCCCCCCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCccCCccc
Q 004248 203 TGNIPTSFGLLKNLSSLDISSNYLTGSIPPGLGTLSKLQYLNVSNNSLASSIPAQLGDLDSLVDLDLSMNSLSGSVPSEL 282 (766)
Q Consensus 203 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~l 282 (766)
+ .+|..|++|++|++|+|++|.|+ .+|..|++|++|++|+|++|.|+ .+|..|+++++|++|+|++|.|++.+|..+
T Consensus 260 ~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~ 336 (727)
T 4b8c_D 260 T-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKIL 336 (727)
T ss_dssp S-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHH
T ss_pred c-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHH
Confidence 6 56666777777777777777776 56666777777777777777665 556667777777777777777776666655
Q ss_pred CCCCC-CCEEEccCccCccccC
Q 004248 283 RGLRS-LQKFVIGNNFLSGNLS 303 (766)
Q Consensus 283 ~~l~~-L~~L~ls~N~l~g~~~ 303 (766)
..+.. +..+++++|.++|.+|
T Consensus 337 ~~~~~~~~~l~l~~N~l~~~~p 358 (727)
T 4b8c_D 337 TEKSVTGLIFYLRDNRPEIPLP 358 (727)
T ss_dssp HHHHHHHHHHHHHHCCCCCCCC
T ss_pred hhcchhhhHHhhccCcccCcCc
Confidence 43211 1124455555554444
No 351
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.84 E-value=2.3e-20 Score=189.76 Aligned_cols=135 Identities=31% Similarity=0.349 Sum_probs=110.2
Q ss_pred CCCCEEEccCCCCCccCCcccCCCCCCcEEEeecCcCCCCCCccccCCCCCCEEEccCCCCCCCCCcccCCCCCCCEEec
Q 004248 142 PTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPSSLGQLSVLSVLDLSRNSLTGNIPTSFGLLKNLSSLDI 221 (766)
Q Consensus 142 ~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 221 (766)
++|++|+|++|.+++..|..|.++++|++|+|++|+++...+..|.++++|++|+|++|++++..+..|..+++|+.|+|
T Consensus 40 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L 119 (229)
T 3e6j_A 40 TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFM 119 (229)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEec
Confidence 67888999999998888888888888999999988887655566788888888888888888776677788888888888
Q ss_pred cCCcCCCCCCCCCCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCcc
Q 004248 222 SSNYLTGSIPPGLGTLSKLQYLNVSNNSLASSIPAQLGDLDSLVDLDLSMNSLSGS 277 (766)
Q Consensus 222 s~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ 277 (766)
++|+++ .+|..+..+++|++|+|++|++++..+..+..+++|+.|+|++|.+...
T Consensus 120 s~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 174 (229)
T 3e6j_A 120 CCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCE 174 (229)
T ss_dssp CSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTT
T ss_pred cCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCC
Confidence 888887 6777788888888888888888776666677778888888888877654
No 352
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.82 E-value=1.1e-19 Score=183.59 Aligned_cols=134 Identities=22% Similarity=0.234 Sum_probs=85.7
Q ss_pred CCCEEEccCCCCCccCC-cccCCCCCCcEEEeecCcCCCCCCccccCCCCCCEEEccCCCCCCCCCcccCCCCCCCEEec
Q 004248 143 TLQALDLRSCSISGVIP-FSLGNLTNLTSLYLSDNGLTGTIPSSLGQLSVLSVLDLSRNSLTGNIPTSFGLLKNLSSLDI 221 (766)
Q Consensus 143 ~L~~L~Ls~N~l~g~~p-~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 221 (766)
.+++|+|++|.+++..| ..|.++++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|.++++|++|+|
T Consensus 33 ~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 112 (220)
T 2v70_A 33 YTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLML 112 (220)
T ss_dssp TCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEEC
T ss_pred CCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEEC
Confidence 45677777777766544 34566666777777776666655556666666666666666666655556666666666666
Q ss_pred cCCcCCCCCCCCCCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCc
Q 004248 222 SSNYLTGSIPPGLGTLSKLQYLNVSNNSLASSIPAQLGDLDSLVDLDLSMNSLSG 276 (766)
Q Consensus 222 s~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g 276 (766)
++|++++..|..|..+++|++|+|++|++++..|..|..+++|++|+|++|.+++
T Consensus 113 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c 167 (220)
T 2v70_A 113 RSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNC 167 (220)
T ss_dssp TTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEEC
T ss_pred CCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcC
Confidence 6666666556666666666666666666666556666666666666666665554
No 353
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.81 E-value=1.6e-19 Score=182.30 Aligned_cols=156 Identities=20% Similarity=0.196 Sum_probs=129.5
Q ss_pred CEEEccCCCCCccCCcccCCCCCCcEEEeecCcCCCCCC-ccccCCCCCCEEEccCCCCCCCCCcccCCCCCCCEEeccC
Q 004248 145 QALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIP-SSLGQLSVLSVLDLSRNSLTGNIPTSFGLLKNLSSLDISS 223 (766)
Q Consensus 145 ~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p-~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 223 (766)
+++++++|.++. +|..+. ..+++|+|++|++++..| ..|.++++|++|+|++|++++..|..|.++++|+.|+|++
T Consensus 14 ~~l~~s~n~l~~-iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 14 TTVDCSNQKLNK-IPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp TEEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEeEeCCCCccc-CccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 578888888875 565553 456899999999987654 4578899999999999999887777888999999999999
Q ss_pred CcCCCCCCCCCCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccCCCCCCCEEEccCccCccccC
Q 004248 224 NYLTGSIPPGLGTLSKLQYLNVSNNSLASSIPAQLGDLDSLVDLDLSMNSLSGSVPSELRGLRSLQKFVIGNNFLSGNLS 303 (766)
Q Consensus 224 N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~~~ 303 (766)
|.+++..|..|..+++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|..+++|+.|++++|.+.+..+
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 99987777778888999999999999988888888888999999999999988888888888888888888888775433
No 354
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.81 E-value=6.3e-20 Score=199.87 Aligned_cols=164 Identities=28% Similarity=0.243 Sum_probs=125.7
Q ss_pred CchhhhhCCCCCCEEEccCCCCCccCCcccC-CCCCCcEEEeecCcCCCCCCccccCCCCCCEEEccCCCCCCCCCcccC
Q 004248 133 IPDWLGQQLPTLQALDLRSCSISGVIPFSLG-NLTNLTSLYLSDNGLTGTIPSSLGQLSVLSVLDLSRNSLTGNIPTSFG 211 (766)
Q Consensus 133 ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~-~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~ 211 (766)
+|..+ .+.++.|+|++|.|++..+..+. ++++|++|+|++|++++..|..|.++++|++|+|++|++++..+..|.
T Consensus 33 iP~~~---~~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 109 (361)
T 2xot_A 33 VPQSL---PSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFS 109 (361)
T ss_dssp CCSSC---CTTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTT
T ss_pred cCccC---CCCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhC
Confidence 55443 24578899999999888777777 888999999999988877777888888899999998888877777788
Q ss_pred CCCCCCEEeccCCcCCCCCCCCCCCCCCccEEEccCCCCCCCCcccc---CCCCCCCEEEccCCcCCccCCcccCCCCC-
Q 004248 212 LLKNLSSLDISSNYLTGSIPPGLGTLSKLQYLNVSNNSLASSIPAQL---GDLDSLVDLDLSMNSLSGSVPSELRGLRS- 287 (766)
Q Consensus 212 ~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l---~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~- 287 (766)
++++|+.|+|++|++++..|..|.++++|+.|+|++|++++..+..+ ..+++|+.|+|++|+|++..+..+..++.
T Consensus 110 ~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~ 189 (361)
T 2xot_A 110 DLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAW 189 (361)
T ss_dssp TCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHH
T ss_pred CCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHh
Confidence 88888888888888887777888888888888888888876444444 56788888888888887655555665554
Q ss_pred -CCEEEccCccCc
Q 004248 288 -LQKFVIGNNFLS 299 (766)
Q Consensus 288 -L~~L~ls~N~l~ 299 (766)
|+.|++++|.+.
T Consensus 190 ~l~~l~l~~N~~~ 202 (361)
T 2xot_A 190 VKNGLYLHNNPLE 202 (361)
T ss_dssp HHTTEECCSSCEE
T ss_pred hcceEEecCCCcc
Confidence 255666666553
No 355
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.81 E-value=3.1e-19 Score=180.24 Aligned_cols=133 Identities=25% Similarity=0.284 Sum_probs=67.0
Q ss_pred CCcEEEeecCcCCCCCCccccCCCCCCEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCCCCCCCccEEEcc
Q 004248 167 NLTSLYLSDNGLTGTIPSSLGQLSVLSVLDLSRNSLTGNIPTSFGLLKNLSSLDISSNYLTGSIPPGLGTLSKLQYLNVS 246 (766)
Q Consensus 167 ~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls 246 (766)
+|+.|+|++|++++..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|.++...+..|..+++|++|+|+
T Consensus 33 ~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~ 112 (220)
T 2v9t_B 33 TITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLN 112 (220)
T ss_dssp TCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECC
Confidence 44444444444444333444445555555555555544444455555555555555555553333334455555555555
Q ss_pred CCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccCCCCCCCEEEccCccCc
Q 004248 247 NNSLASSIPAQLGDLDSLVDLDLSMNSLSGSVPSELRGLRSLQKFVIGNNFLS 299 (766)
Q Consensus 247 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~ 299 (766)
+|++++..|..|.++++|++|+|++|++++..+..|..+++|+.|++++|.+.
T Consensus 113 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 113 ANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFI 165 (220)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEE
T ss_pred CCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcC
Confidence 55555554555555555555555555555444444555555555555555443
No 356
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.81 E-value=4.2e-20 Score=213.87 Aligned_cols=171 Identities=30% Similarity=0.415 Sum_probs=97.9
Q ss_pred CCCCCEEEccCCCCCccCCcccCCCCCCcEEEeecCcCCCCCCccccCCCCCCEEEccCCCCCCCCCcccCCCCCCCEEe
Q 004248 141 LPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPSSLGQLSVLSVLDLSRNSLTGNIPTSFGLLKNLSSLD 220 (766)
Q Consensus 141 l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 220 (766)
|++|+.|+|++|.+... | .+..+++|+.|+|++|++++..| +.++++|+.|+|++|.+++ +| .+..+++|+.|+
T Consensus 42 L~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~ 115 (605)
T 1m9s_A 42 LNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLS 115 (605)
T ss_dssp HTTCCCCBCTTCCCCCC-T-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEE
T ss_pred CCCCCEEECcCCCCCCC-h-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEE
Confidence 56666666666666543 2 36666666666666666664333 6666666666666666654 22 456666666666
Q ss_pred ccCCcCCCCCCCCCCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccCCCCCCCEEEccCccCcc
Q 004248 221 ISSNYLTGSIPPGLGTLSKLQYLNVSNNSLASSIPAQLGDLDSLVDLDLSMNSLSGSVPSELRGLRSLQKFVIGNNFLSG 300 (766)
Q Consensus 221 Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g 300 (766)
|++|.+++ + +.+..+++|+.|+|++|.+++. ..+..+++|+.|+|++|++++..| +..+++|+.|+|++|.+++
T Consensus 116 Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~ 189 (605)
T 1m9s_A 116 LEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISD 189 (605)
T ss_dssp CTTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCB
T ss_pred ecCCCCCC-C-ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCCC
Confidence 66666654 2 3355666666666666666543 345566666666666666655444 5555555555555555553
Q ss_pred ccCCCccCCCCcccEEEccCCCCCCC
Q 004248 301 NLSVNLFPTVSQLQIIVLRQNGFTGP 326 (766)
Q Consensus 301 ~~~~~~~~~l~~L~~L~L~~N~l~~~ 326 (766)
. + .+..+++|+.|+|++|.+++.
T Consensus 190 l-~--~l~~l~~L~~L~L~~N~l~~~ 212 (605)
T 1m9s_A 190 L-R--ALAGLKNLDVLELFSQECLNK 212 (605)
T ss_dssp C-G--GGTTCTTCSEEECCSEEEECC
T ss_pred C-h--HHccCCCCCEEEccCCcCcCC
Confidence 2 1 134444555555555554443
No 357
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.81 E-value=8.1e-20 Score=192.84 Aligned_cols=170 Identities=30% Similarity=0.415 Sum_probs=99.1
Q ss_pred CCCCCEEEccCCCCCccCCcccCCCCCCcEEEeecCcCCCCCCccccCCCCCCEEEccCCCCCCCCCcccCCCCCCCEEe
Q 004248 141 LPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPSSLGQLSVLSVLDLSRNSLTGNIPTSFGLLKNLSSLD 220 (766)
Q Consensus 141 l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 220 (766)
+++|++|++++|.++.. | .+..+++|++|+|++|++++..| +.++++|++|+|++|++++ +| .+..+++|++|+
T Consensus 45 l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~ 118 (291)
T 1h6t_A 45 LNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLS 118 (291)
T ss_dssp HHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEE
T ss_pred cCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEE
Confidence 56677777777776643 2 36666677777777777664333 6666666667666666654 22 366666666666
Q ss_pred ccCCcCCCCCCCCCCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccCCCCCCCEEEccCccCcc
Q 004248 221 ISSNYLTGSIPPGLGTLSKLQYLNVSNNSLASSIPAQLGDLDSLVDLDLSMNSLSGSVPSELRGLRSLQKFVIGNNFLSG 300 (766)
Q Consensus 221 Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g 300 (766)
|++|++++. +.+..+++|++|++++|++++. ..+..+++|++|++++|++++..| +..+++|+.
T Consensus 119 L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~---------- 182 (291)
T 1h6t_A 119 LEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQN---------- 182 (291)
T ss_dssp CTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCE----------
T ss_pred CCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCE----------
Confidence 666666542 3455566666666666666543 345555555555555555554332 444444444
Q ss_pred ccCCCccCCCCcccEEEccCCCCCCCCCcccCCCCCCCEEEccCCCCCC
Q 004248 301 NLSVNLFPTVSQLQIIVLRQNGFTGPPPDVLWSMPQLRLLDISRNNFTG 349 (766)
Q Consensus 301 ~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g 349 (766)
|++++|++++. | .+..+++|+.|++++|+++.
T Consensus 183 ---------------L~L~~N~i~~l-~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 183 ---------------LYLSKNHISDL-R-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp ---------------EECCSSCCCBC-G-GGTTCTTCSEEEEEEEEEEC
T ss_pred ---------------EECCCCcCCCC-h-hhccCCCCCEEECcCCcccC
Confidence 44444444432 2 25566667777777766653
No 358
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.81 E-value=8.5e-20 Score=198.84 Aligned_cols=176 Identities=27% Similarity=0.252 Sum_probs=89.0
Q ss_pred CEEEccCCCCCccCCcccCCCCCCcEEEeecCcCCCCCCcccc-CCCCCCEEEccCCCCCCCCCcccCCCCCCCEEeccC
Q 004248 145 QALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPSSLG-QLSVLSVLDLSRNSLTGNIPTSFGLLKNLSSLDISS 223 (766)
Q Consensus 145 ~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~-~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 223 (766)
+++++++|.++. +|..+. ..++.|+|++|++++..+..+. ++++|++|+|++|++++..|..|.++++|++|+|++
T Consensus 21 ~~l~c~~~~l~~-iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLPN-VPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCSS-CCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcCc-cCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 455666665553 343332 2355555555555544444444 555555555555555544444455555555555555
Q ss_pred CcCCCCCCCCCCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccCCCCCCCEEEccCccCccccC
Q 004248 224 NYLTGSIPPGLGTLSKLQYLNVSNNSLASSIPAQLGDLDSLVDLDLSMNSLSGSVPSELRGLRSLQKFVIGNNFLSGNLS 303 (766)
Q Consensus 224 N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~~~ 303 (766)
|++++..+..|..+++|++|+|++|++++..|..|.++++|++|+|++|++++ +|
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~-------------------------l~ 152 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISR-------------------------FP 152 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCS-------------------------CC
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCe-------------------------eC
Confidence 55544333444444455555555444444444444444444444444444443 33
Q ss_pred CCcc---CCCCcccEEEccCCCCCCCCCcccCCCCC--CCEEEccCCCCC
Q 004248 304 VNLF---PTVSQLQIIVLRQNGFTGPPPDVLWSMPQ--LRLLDISRNNFT 348 (766)
Q Consensus 304 ~~~~---~~l~~L~~L~L~~N~l~~~~p~~l~~l~~--L~~L~Ls~N~l~ 348 (766)
...| ..+++|+.|+|++|+|+..++..+..++. |+.|+|++|.+.
T Consensus 153 ~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 153 VELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp GGGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEE
T ss_pred HHHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCcc
Confidence 3333 34556666666666666655555655555 356666666654
No 359
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.80 E-value=4e-19 Score=179.43 Aligned_cols=135 Identities=21% Similarity=0.255 Sum_probs=124.4
Q ss_pred CCCCEEEccCCCCCccCCcccCCCCCCcEEEeecCcCCCCCCccccCCCCCCEEEccCCCCCCCCCcccCCCCCCCEEec
Q 004248 142 PTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPSSLGQLSVLSVLDLSRNSLTGNIPTSFGLLKNLSSLDI 221 (766)
Q Consensus 142 ~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 221 (766)
++|+.|+|++|.+++..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|+++...+..|.++++|+.|+|
T Consensus 32 ~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L 111 (220)
T 2v9t_B 32 ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLL 111 (220)
T ss_dssp TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEEC
Confidence 57899999999999888889999999999999999999888999999999999999999999766667899999999999
Q ss_pred cCCcCCCCCCCCCCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCc
Q 004248 222 SSNYLTGSIPPGLGTLSKLQYLNVSNNSLASSIPAQLGDLDSLVDLDLSMNSLSG 276 (766)
Q Consensus 222 s~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g 276 (766)
++|.+++..|..|..+++|++|+|++|++++..+..+..+++|++|+|++|.+..
T Consensus 112 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 112 NANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCC
Confidence 9999998888999999999999999999998888889999999999999999864
No 360
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.80 E-value=6.2e-20 Score=190.18 Aligned_cols=137 Identities=15% Similarity=0.137 Sum_probs=105.8
Q ss_pred CCccceeecCCcceEEEEEE-cCCcE--EEEEEeeccccC-------------------------HHHHHHHHHHHhhcC
Q 004248 536 FSDANLIKNGHSGDLFRGIL-EGGIP--VVIKRIDLQSVK-------------------------TEAYLLELDFFSKVS 587 (766)
Q Consensus 536 ~~~~~~ig~G~~g~Vy~~~~-~~g~~--vavK~l~~~~~~-------------------------~~~~~~E~~~l~~l~ 587 (766)
|+..+.||+|+||.||+|.. .+|+. ||||.++..... ...+.+|+++|.+++
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 56778999999999999996 78989 999987543111 136889999999999
Q ss_pred CCCcccceeEEEecCCcEEEEEeeCCC-C----ChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhc-cCCCCCe
Q 004248 588 HARLVPLLGHCMERENEKFLVYKYMPN-G----DLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLH-HECTLPF 661 (766)
Q Consensus 588 H~niv~l~~~~~~~~~~~~lV~Ey~~~-G----sL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH-~~~~~~i 661 (766)
|+++....-+.. +..++||||+.+ | +|.++... .++.+...++.|++.||+||| +. +|
T Consensus 129 ~~~i~~p~~~~~---~~~~lVmE~~g~~g~~~~~L~~~~~~----------~~~~~~~~i~~qi~~~l~~lH~~~---gi 192 (258)
T 1zth_A 129 EAGVSVPQPYTY---MKNVLLMEFIGEDELPAPTLVELGRE----------LKELDVEGIFNDVVENVKRLYQEA---EL 192 (258)
T ss_dssp HTTCCCCCEEEE---ETTEEEEECCEETTEECCBHHHHGGG----------GGGSCHHHHHHHHHHHHHHHHHTS---CE
T ss_pred hCCCCCCeEEEc---CCCEEEEEecCCCCCccccHHHHhhc----------cChHHHHHHHHHHHHHHHHHHHHC---CE
Confidence 887532222222 246999999942 4 55554421 234456789999999999999 76 99
Q ss_pred EecCCCCCCeeeCCCCcEEeccchhhhhc
Q 004248 662 VHRDVQASSILLDDKFEVRLGSLSEVCAQ 690 (766)
Q Consensus 662 iHrDlKp~NILl~~~~~~kl~DFG~a~~~ 690 (766)
|||||||+|||+++ .+||+|||+|...
T Consensus 193 vHrDlkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 193 VHADLSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp ECSSCSTTSEEESS--SEEECCCTTCEET
T ss_pred EeCCCCHHHEEEcC--cEEEEECcccccC
Confidence 99999999999998 9999999999765
No 361
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.80 E-value=1.2e-19 Score=210.00 Aligned_cols=193 Identities=21% Similarity=0.301 Sum_probs=167.6
Q ss_pred CCCCCEEEccCCCCCccCCcccCCCCCCcEEEeecCcCCCCCCccccCCCCCCEEEccCCCCCCCCCcccCCCCCCCEEe
Q 004248 141 LPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPSSLGQLSVLSVLDLSRNSLTGNIPTSFGLLKNLSSLD 220 (766)
Q Consensus 141 l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 220 (766)
+..+..++|+.+.+...++ +..|++|+.|+|++|.++. +| .+..+++|+.|+|++|++++..| +..+++|+.|+
T Consensus 20 l~~l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~ 93 (605)
T 1m9s_A 20 FAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLF 93 (605)
T ss_dssp HHHHHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEE
T ss_pred HHHHHHHhccCCCcccccc--hhcCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEE
Confidence 3345666778888776654 5788999999999999984 45 58999999999999999997655 89999999999
Q ss_pred ccCCcCCCCCCCCCCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccCCCCCCCEEEccCccCcc
Q 004248 221 ISSNYLTGSIPPGLGTLSKLQYLNVSNNSLASSIPAQLGDLDSLVDLDLSMNSLSGSVPSELRGLRSLQKFVIGNNFLSG 300 (766)
Q Consensus 221 Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g 300 (766)
|++|.+++ +| .+..+++|+.|+|++|.+++. ..+..+++|+.|+|++|++++. ..+..+++|+.|+|++|.+++
T Consensus 94 Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~ 167 (605)
T 1m9s_A 94 LDENKIKD-LS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISD 167 (605)
T ss_dssp CCSSCCCC-CT-TSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCC
T ss_pred CcCCCCCC-Ch-hhccCCCCCEEEecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCC
Confidence 99999985 44 799999999999999999863 4588999999999999999975 678999999999999999997
Q ss_pred ccCCCccCCCCcccEEEccCCCCCCCCCcccCCCCCCCEEEccCCCCCCC
Q 004248 301 NLSVNLFPTVSQLQIIVLRQNGFTGPPPDVLWSMPQLRLLDISRNNFTGP 350 (766)
Q Consensus 301 ~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ 350 (766)
..| +..+++|+.|+|++|+|++. ..+..+++|+.|+|++|++++.
T Consensus 168 ~~~---l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~ 212 (605)
T 1m9s_A 168 IVP---LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNK 212 (605)
T ss_dssp CGG---GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEECC
T ss_pred chh---hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcCC
Confidence 666 68899999999999999985 3589999999999999999864
No 362
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.80 E-value=3.9e-19 Score=187.60 Aligned_cols=173 Identities=27% Similarity=0.387 Sum_probs=150.5
Q ss_pred hccCCCCCEEecCCCCCCCCCchhhhhCCCCCCEEEccCCCCCccCCcccCCCCCCcEEEeecCcCCCCCCccccCCCCC
Q 004248 113 LVNLTHLASFNASRFLLPGSIPDWLGQQLPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPSSLGQLSVL 192 (766)
Q Consensus 113 l~~l~~L~~L~ls~n~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L 192 (766)
+..+++|+.|++++|.+.. +|. +.. +++|++|+|++|.+++..| +.++++|++|+|++|.+++ +| .+..+++|
T Consensus 42 ~~~l~~L~~L~l~~~~i~~-~~~-~~~-l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L 114 (291)
T 1h6t_A 42 QNELNSIDQIIANNSDIKS-VQG-IQY-LPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKL 114 (291)
T ss_dssp HHHHHTCCEEECTTSCCCC-CTT-GGG-CTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTC
T ss_pred hhhcCcccEEEccCCCccc-Chh-Hhc-CCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCC
Confidence 4567889999999998854 554 544 9999999999999998655 9999999999999999986 44 49999999
Q ss_pred CEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCCCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCC
Q 004248 193 SVLDLSRNSLTGNIPTSFGLLKNLSSLDISSNYLTGSIPPGLGTLSKLQYLNVSNNSLASSIPAQLGDLDSLVDLDLSMN 272 (766)
Q Consensus 193 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N 272 (766)
++|+|++|++++. ..+..+++|+.|++++|.+++. ..+..+++|++|++++|++++..| +..+++|++|++++|
T Consensus 115 ~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N 188 (291)
T 1h6t_A 115 KSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKN 188 (291)
T ss_dssp CEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSS
T ss_pred CEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCC
Confidence 9999999999864 5788999999999999999865 678999999999999999987655 899999999999999
Q ss_pred cCCccCCcccCCCCCCCEEEccCccCcc
Q 004248 273 SLSGSVPSELRGLRSLQKFVIGNNFLSG 300 (766)
Q Consensus 273 ~l~g~~p~~l~~l~~L~~L~ls~N~l~g 300 (766)
++++ +| .+..+++|+.|++++|.++.
T Consensus 189 ~i~~-l~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 189 HISD-LR-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp CCCB-CG-GGTTCTTCSEEEEEEEEEEC
T ss_pred cCCC-Ch-hhccCCCCCEEECcCCcccC
Confidence 9986 44 48889999999999998864
No 363
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.80 E-value=1.1e-18 Score=177.29 Aligned_cols=154 Identities=28% Similarity=0.289 Sum_probs=121.2
Q ss_pred CCEEEccCCCCCccCCcccCCCCCCcEEEeecCcCCCCCCccccCCCCCCEEEccCCCCCCCCCcccCCCCCCCEEeccC
Q 004248 144 LQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPSSLGQLSVLSVLDLSRNSLTGNIPTSFGLLKNLSSLDISS 223 (766)
Q Consensus 144 L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 223 (766)
-+.++.+++.++ .+|..+. ++|++|+|++|++++..|..|.++++|++|+|++|+++...+..|..+++|+.|+|++
T Consensus 21 ~~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~ 97 (229)
T 3e6j_A 21 GTTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGT 97 (229)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCC
Confidence 356777777776 4555443 7888888888888887788888888888888888888766666778888888888888
Q ss_pred CcCCCCCCCCCCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccCCCCCCCEEEccCccCccc
Q 004248 224 NYLTGSIPPGLGTLSKLQYLNVSNNSLASSIPAQLGDLDSLVDLDLSMNSLSGSVPSELRGLRSLQKFVIGNNFLSGN 301 (766)
Q Consensus 224 N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~ 301 (766)
|++++..+..|..+++|++|+|++|+++ .+|..+..+++|++|+|++|++++..+..|..+++|+.|++++|.+.+.
T Consensus 98 N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 174 (229)
T 3e6j_A 98 NQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCE 174 (229)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTT
T ss_pred CcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCC
Confidence 8888766666788888888888888887 6777788888888888888888866666677777777777777776643
No 364
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.79 E-value=1.4e-21 Score=227.10 Aligned_cols=280 Identities=10% Similarity=0.032 Sum_probs=161.0
Q ss_pred ccCCCCCEEecCCCCCCCC----CchhhhhCCCCCCEEEccCCCCC----ccCCcccCCCCCCcEEEeecCcCCCCCCcc
Q 004248 114 VNLTHLASFNASRFLLPGS----IPDWLGQQLPTLQALDLRSCSIS----GVIPFSLGNLTNLTSLYLSDNGLTGTIPSS 185 (766)
Q Consensus 114 ~~l~~L~~L~ls~n~l~g~----ip~~~~~~l~~L~~L~Ls~N~l~----g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~ 185 (766)
.++++|+.|++++|.+.+. ++.... .+++|++|+|++|.++ +.++..+.++++|++|+|++|.+.+ +|..
T Consensus 161 ~~~~~L~~L~L~~~~~~~~~~~~l~~~~~-~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~ 238 (592)
T 3ogk_B 161 THCRKIKTLLMEESSFSEKDGKWLHELAQ-HNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGF 238 (592)
T ss_dssp HHCTTCSEEECTTCEEECCCSHHHHHHHH-HCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHH
T ss_pred hhCCCCCEEECccccccCcchhHHHHHHh-cCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHH
Confidence 4789999999999987665 333333 4899999999999987 3445556788999999999998875 6777
Q ss_pred ccCCCCCCEEEccCCCCC---CCCCcccCCCCCCCEEeccCCcCCCCCCCCCCCCCCccEEEccCCCCCCCCc-cccCCC
Q 004248 186 LGQLSVLSVLDLSRNSLT---GNIPTSFGLLKNLSSLDISSNYLTGSIPPGLGTLSKLQYLNVSNNSLASSIP-AQLGDL 261 (766)
Q Consensus 186 l~~L~~L~~L~Ls~N~l~---~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p-~~l~~l 261 (766)
+.++++|+.|+++.+... +..+..+..+++|+.|+++++. .+.+|..+..+++|++|+|++|.+++... ..+..+
T Consensus 239 ~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~-~~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~ 317 (592)
T 3ogk_B 239 FKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMG-PNEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKC 317 (592)
T ss_dssp HHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCC-TTTGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTC
T ss_pred HhhhhHHHhhcccccccccchHHHHHHhhccccccccCccccc-hhHHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhC
Confidence 788888888888753322 2333455666677777766643 23456666666677777777766543322 223455
Q ss_pred CCCCEEEccCCcCCccCCcccCCCCCCCEEEcc------------------------------------CccCccccCCC
Q 004248 262 DSLVDLDLSMNSLSGSVPSELRGLRSLQKFVIG------------------------------------NNFLSGNLSVN 305 (766)
Q Consensus 262 ~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ls------------------------------------~N~l~g~~~~~ 305 (766)
++|++|+++++-..+.++..+..+++|++|+++ .|.+++.....
T Consensus 318 ~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~ 397 (592)
T 3ogk_B 318 PNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLES 397 (592)
T ss_dssp TTCCEEEEEGGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHH
T ss_pred cCCCEEeccCccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHH
Confidence 555555555222222222233344445555554 44444332222
Q ss_pred ccCCCCcccEEEcc----CCCCCCC-----CCcccCCCCCCCEEEccCCC--CCCCCCcccccCCCCCcEEEccCCcCcc
Q 004248 306 LFPTVSQLQIIVLR----QNGFTGP-----PPDVLWSMPQLRLLDISRNN--FTGPLPNSRSNVNTSTVELNISQNMFYG 374 (766)
Q Consensus 306 ~~~~l~~L~~L~L~----~N~l~~~-----~p~~l~~l~~L~~L~Ls~N~--l~g~~p~~~~~~~~~l~~L~ls~N~l~g 374 (766)
+...+++|+.|+++ .|.+++. ++..+.++++|+.|++++|. +++..+.......++|+.|++++|.+++
T Consensus 398 l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~ 477 (592)
T 3ogk_B 398 IGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESD 477 (592)
T ss_dssp HHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSH
T ss_pred HHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCH
Confidence 21224445555553 4444443 12223445555555554322 3332222222234556667777666654
Q ss_pred -CCC---cCCCCCCEEeccCCcCccc
Q 004248 375 -GLT---PVLGRFRLVDLSGNYFEGR 396 (766)
Q Consensus 375 -~~~---~~l~~l~~ldLs~N~l~g~ 396 (766)
.++ ..+++|+.|+|++|.+++.
T Consensus 478 ~~~~~~~~~~~~L~~L~l~~n~l~~~ 503 (592)
T 3ogk_B 478 EGLMEFSRGCPNLQKLEMRGCCFSER 503 (592)
T ss_dssp HHHHHHHTCCTTCCEEEEESCCCBHH
T ss_pred HHHHHHHhcCcccCeeeccCCCCcHH
Confidence 222 3456677777777776554
No 365
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.77 E-value=5.6e-21 Score=222.08 Aligned_cols=303 Identities=11% Similarity=0.047 Sum_probs=202.3
Q ss_pred CEEEEEcCCCCcCCCCCCCCccchhhhccC--CCCCEEecCCCC-CCC-CCchhhhhCCCCCCEEEccCCCCCcc----C
Q 004248 87 SVVGINISGFRRTRLGSQNPRFAADALVNL--THLASFNASRFL-LPG-SIPDWLGQQLPTLQALDLRSCSISGV----I 158 (766)
Q Consensus 87 ~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l--~~L~~L~ls~n~-l~g-~ip~~~~~~l~~L~~L~Ls~N~l~g~----~ 158 (766)
.++.++|++.... ......+..+ ++|++|++++|. +.. .++. +...+++|++|+|++|.+++. +
T Consensus 113 ~L~~L~L~~~~i~-------~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~-~~~~~~~L~~L~L~~~~~~~~~~~~l 184 (592)
T 3ogk_B 113 QLKSVHFRRMIVS-------DLDLDRLAKARADDLETLKLDKCSGFTTDGLLS-IVTHCRKIKTLLMEESSFSEKDGKWL 184 (592)
T ss_dssp TCCEEEEESCBCC-------HHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHH-HHHHCTTCSEEECTTCEEECCCSHHH
T ss_pred CCCeEEeeccEec-------HHHHHHHHHhccccCcEEECcCCCCcCHHHHHH-HHhhCCCCCEEECccccccCcchhHH
Confidence 4667777653211 1112234443 459999999875 111 1222 223489999999999998765 4
Q ss_pred CcccCCCCCCcEEEeecCcCCC----CCCccccCCCCCCEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCC---CCCC
Q 004248 159 PFSLGNLTNLTSLYLSDNGLTG----TIPSSLGQLSVLSVLDLSRNSLTGNIPTSFGLLKNLSSLDISSNYLT---GSIP 231 (766)
Q Consensus 159 p~~l~~l~~L~~L~Ls~N~l~~----~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~---~~~p 231 (766)
+..+.++++|++|+|++|.+++ .++..+.++++|++|+|++|.+.+ +|..+.++++|+.|+++.+... +..+
T Consensus 185 ~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~ 263 (592)
T 3ogk_B 185 HELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKY 263 (592)
T ss_dssp HHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSS
T ss_pred HHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHH
Confidence 4456788999999999999983 345556789999999999999986 7888999999999999864433 3455
Q ss_pred CCCCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCccCC-cccCCCCCCCEEEccCccCccccCCCccCCC
Q 004248 232 PGLGTLSKLQYLNVSNNSLASSIPAQLGDLDSLVDLDLSMNSLSGSVP-SELRGLRSLQKFVIGNNFLSGNLSVNLFPTV 310 (766)
Q Consensus 232 ~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p-~~l~~l~~L~~L~ls~N~l~g~~~~~~~~~l 310 (766)
..+..+++|+.|+++++. .+.+|..+..+++|++|+|++|.+++... ..+..+++|+.|+++ |.+.......++..+
T Consensus 264 ~~l~~~~~L~~L~l~~~~-~~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~-~~~~~~~l~~~~~~~ 341 (592)
T 3ogk_B 264 MNLVFPRKLCRLGLSYMG-PNEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETR-NVIGDRGLEVLAQYC 341 (592)
T ss_dssp SCCCCCTTCCEEEETTCC-TTTGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEE-GGGHHHHHHHHHHHC
T ss_pred HHhhccccccccCccccc-hhHHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEecc-CccCHHHHHHHHHhC
Confidence 678899999999999864 35678888899999999999999876544 446899999999999 444332222233456
Q ss_pred CcccEEEcc-----------CCCCCCC-CCcccCCCCCCCEEEccCCCCCCCCCcccccCCCCCcEEEcc----CCcCcc
Q 004248 311 SQLQIIVLR-----------QNGFTGP-PPDVLWSMPQLRLLDISRNNFTGPLPNSRSNVNTSTVELNIS----QNMFYG 374 (766)
Q Consensus 311 ~~L~~L~L~-----------~N~l~~~-~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~L~ls----~N~l~g 374 (766)
++|+.|+++ .|.+++. ++.....+++|++|+++.|++++..+......+++|+.|+++ .|.+++
T Consensus 342 ~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~ 421 (592)
T 3ogk_B 342 KQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITD 421 (592)
T ss_dssp TTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSS
T ss_pred CCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccC
Confidence 677888887 3555433 222234467777777777777654443332334566666664 455544
Q ss_pred C-----CC---cCCCCCCEEeccCC--cCccccChh
Q 004248 375 G-----LT---PVLGRFRLVDLSGN--YFEGRVPEY 400 (766)
Q Consensus 375 ~-----~~---~~l~~l~~ldLs~N--~l~g~~p~~ 400 (766)
. ++ ..+++|+.|+|+++ .+++..+..
T Consensus 422 ~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~ 457 (592)
T 3ogk_B 422 LPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSY 457 (592)
T ss_dssp CCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHH
T ss_pred chHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHH
Confidence 2 11 12455666666532 244444333
No 366
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.77 E-value=8.6e-19 Score=173.75 Aligned_cols=152 Identities=19% Similarity=0.262 Sum_probs=103.4
Q ss_pred CCCCCEEEccCCCCCccCCcccCCCCCCcEEEeecCcCCCCCCccccCCCCCCEEEccCCCCCCCCCcccCCCCCCCEEe
Q 004248 141 LPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPSSLGQLSVLSVLDLSRNSLTGNIPTSFGLLKNLSSLD 220 (766)
Q Consensus 141 l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 220 (766)
+++|++|++++|.++ .+| .+..+++|++|++++|.++ .++.+..+++|++|++++|++++..|..|+.+++|++|+
T Consensus 43 l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~ 118 (197)
T 4ezg_A 43 MNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLD 118 (197)
T ss_dssp HHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEE
T ss_pred cCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEE
Confidence 667777777777776 444 5777777777777777554 334677777777777777777766677777777777777
Q ss_pred ccCCcCCCCCCCCCCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccCCCCCCCEEEccCccCc
Q 004248 221 ISSNYLTGSIPPGLGTLSKLQYLNVSNNSLASSIPAQLGDLDSLVDLDLSMNSLSGSVPSELRGLRSLQKFVIGNNFLS 299 (766)
Q Consensus 221 Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~ 299 (766)
|++|.+++..|..+..+++|++|++++|.+.+.+| .+..+++|++|++++|++++ ++ .+..+++|+.|++++|++.
T Consensus 119 Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~-~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~N~i~ 194 (197)
T 4ezg_A 119 ISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIM-PLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLYAFSQTIG 194 (197)
T ss_dssp CCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCG-GGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEEECBC---
T ss_pred ecCCccCcHhHHHHhhCCCCCEEEccCCCCccccH-hhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEEeeCcccC
Confidence 77777776666667777777777777776323444 46677777777777777764 23 5666666666666666654
No 367
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.76 E-value=1.4e-18 Score=172.33 Aligned_cols=155 Identities=20% Similarity=0.280 Sum_probs=133.8
Q ss_pred ccCCCCCEEecCCCCCCCCCchhhhhCCCCCCEEEccCCCCCccCCcccCCCCCCcEEEeecCcCCCCCCccccCCCCCC
Q 004248 114 VNLTHLASFNASRFLLPGSIPDWLGQQLPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPSSLGQLSVLS 193 (766)
Q Consensus 114 ~~l~~L~~L~ls~n~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~ 193 (766)
..+++|+.|++++|.+. .+| .+.. +++|++|++++|.++. +..+..+++|++|+|++|++++..|..+..+++|+
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~-l~~L~~L~l~~n~~~~--~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~ 115 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEY-AHNIKDLTINNIHATN--YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLT 115 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGG-CTTCSEEEEESCCCSC--CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCC
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhc-CCCCCEEEccCCCCCc--chhhhcCCCCCEEEeECCccCcccChhhcCCCCCC
Confidence 56778999999999887 677 4554 9999999999997753 45799999999999999999988899999999999
Q ss_pred EEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCCCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCc
Q 004248 194 VLDLSRNSLTGNIPTSFGLLKNLSSLDISSNYLTGSIPPGLGTLSKLQYLNVSNNSLASSIPAQLGDLDSLVDLDLSMNS 273 (766)
Q Consensus 194 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~ 273 (766)
+|+|++|++++..|..++.+++|++|+|++|.+.+.+| .+..+++|++|++++|.+++ ++ .+..+++|++|++++|+
T Consensus 116 ~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~-~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~N~ 192 (197)
T 4ezg_A 116 LLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIM-PLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLYAFSQT 192 (197)
T ss_dssp EEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCG-GGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEEECBC-
T ss_pred EEEecCCccCcHhHHHHhhCCCCCEEEccCCCCccccH-hhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEEeeCcc
Confidence 99999999998889999999999999999998444666 68999999999999999986 44 68899999999999999
Q ss_pred CCc
Q 004248 274 LSG 276 (766)
Q Consensus 274 l~g 276 (766)
+.+
T Consensus 193 i~~ 195 (197)
T 4ezg_A 193 IGG 195 (197)
T ss_dssp ---
T ss_pred cCC
Confidence 864
No 368
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.76 E-value=5.4e-21 Score=219.93 Aligned_cols=180 Identities=23% Similarity=0.212 Sum_probs=113.0
Q ss_pred ccCCCCCEEecCCCCCCCCCchhhhhCCCCCCEEEccCCC-------------CCccCCcccCCCCCCcEEE-eecCcCC
Q 004248 114 VNLTHLASFNASRFLLPGSIPDWLGQQLPTLQALDLRSCS-------------ISGVIPFSLGNLTNLTSLY-LSDNGLT 179 (766)
Q Consensus 114 ~~l~~L~~L~ls~n~l~g~ip~~~~~~l~~L~~L~Ls~N~-------------l~g~~p~~l~~l~~L~~L~-Ls~N~l~ 179 (766)
..+++|+.|++++|.+. .||+.++. +++|+.|++++|. +.+.+|..++++++|+.|+ ++.|.+.
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~-l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~ 423 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELES-CKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLD 423 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHH-HHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHH
T ss_pred ccCccceeccCChhhHH-hhHHHHHH-HHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccc
Confidence 45777888888888774 67888876 8888888887664 5666677777777777777 5554332
Q ss_pred CCCCc------cccC--CCCCCEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCCCCCCCccEEEccCCCCC
Q 004248 180 GTIPS------SLGQ--LSVLSVLDLSRNSLTGNIPTSFGLLKNLSSLDISSNYLTGSIPPGLGTLSKLQYLNVSNNSLA 251 (766)
Q Consensus 180 ~~~p~------~l~~--L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 251 (766)
. ++. .+.. ...|++|+|++|++++ +|. |+.+++|+.|+|++|.++ .+|..++++++|+.|+|++|+++
T Consensus 424 ~-L~~l~l~~n~i~~l~~~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~ 499 (567)
T 1dce_A 424 D-LRSKFLLENSVLKMEYADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALE 499 (567)
T ss_dssp H-HHHHHHHHHHHHHHHHTTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC
T ss_pred h-hhhhhhhcccccccCccCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCC
Confidence 0 110 0000 0136666666666664 454 666666666666666666 56666666666666666666666
Q ss_pred CCCccccCCCCCCCEEEccCCcCCccC-CcccCCCCCCCEEEccCccCccc
Q 004248 252 SSIPAQLGDLDSLVDLDLSMNSLSGSV-PSELRGLRSLQKFVIGNNFLSGN 301 (766)
Q Consensus 252 ~~~p~~l~~l~~L~~L~Ls~N~l~g~~-p~~l~~l~~L~~L~ls~N~l~g~ 301 (766)
+ +| .++++++|++|+|++|++++.. |..++.+++|+.|++++|.+++.
T Consensus 500 ~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~ 548 (567)
T 1dce_A 500 N-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQE 548 (567)
T ss_dssp C-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGS
T ss_pred C-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCC
Confidence 5 45 5666666666666666666554 66666666666666666666543
No 369
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.75 E-value=1.3e-19 Score=214.78 Aligned_cols=163 Identities=27% Similarity=0.291 Sum_probs=113.9
Q ss_pred EeecCcCCCCCCccccCCCCCCEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCCCCCCCccEEEccCCCCC
Q 004248 172 YLSDNGLTGTIPSSLGQLSVLSVLDLSRNSLTGNIPTSFGLLKNLSSLDISSNYLTGSIPPGLGTLSKLQYLNVSNNSLA 251 (766)
Q Consensus 172 ~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 251 (766)
+++.|.+. ..|..+..+++|+.|+|++|.+. .+|..+.++++|++|+|++|.++ .+|..|++|++|++|+|++|+|+
T Consensus 207 ~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~ 283 (727)
T 4b8c_D 207 DDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT 283 (727)
T ss_dssp ----------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS
T ss_pred ccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC
Confidence 44556655 56778888999999999999987 67877778999999999999998 78888899999999999999998
Q ss_pred CCCccccCCCCCCCEEEccCCcCCccCCcccCCCCCCCEEEccCccCccccCCCccCCCCcccEEEccCCCCCCCCCccc
Q 004248 252 SSIPAQLGDLDSLVDLDLSMNSLSGSVPSELRGLRSLQKFVIGNNFLSGNLSVNLFPTVSQLQIIVLRQNGFTGPPPDVL 331 (766)
Q Consensus 252 ~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l 331 (766)
.+|..|+++++|++|+|++|.|+ .+|..|+++++|+.|+|++|.|++.+|..+......+..++|++|.+++.+|.
T Consensus 284 -~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~-- 359 (727)
T 4b8c_D 284 -SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPH-- 359 (727)
T ss_dssp -SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCC--
T ss_pred -ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCcc--
Confidence 67888999999999999999886 77888888999999999999888877654422112223467888888887775
Q ss_pred CCCCCCCEEEccCC
Q 004248 332 WSMPQLRLLDISRN 345 (766)
Q Consensus 332 ~~l~~L~~L~Ls~N 345 (766)
.|+.|+++.|
T Consensus 360 ----~l~~l~l~~n 369 (727)
T 4b8c_D 360 ----ERRFIEINTD 369 (727)
T ss_dssp ----C---------
T ss_pred ----ccceeEeecc
Confidence 3556666666
No 370
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.75 E-value=9.8e-22 Score=226.13 Aligned_cols=188 Identities=22% Similarity=0.245 Sum_probs=127.0
Q ss_pred CCCCCEEEccCCCCCccCCcccCCCCCCcEEEeecCc-------------CCCCCCccccCCCCCCEEE-ccCCCCCCCC
Q 004248 141 LPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNG-------------LTGTIPSSLGQLSVLSVLD-LSRNSLTGNI 206 (766)
Q Consensus 141 l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~-------------l~~~~p~~l~~L~~L~~L~-Ls~N~l~~~~ 206 (766)
+++|+.|+|++|.++ .+|..++++++|+.|++++|. +.+.+|..++++++|+.|+ ++.|.+
T Consensus 348 ~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~---- 422 (567)
T 1dce_A 348 DEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYL---- 422 (567)
T ss_dssp TTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHH----
T ss_pred CccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhccc----
Confidence 666777777777775 567777777777777775553 3444455555555555555 343322
Q ss_pred CcccCCCCCCCEEeccCCcCCCCCCCCCCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccCCCC
Q 004248 207 PTSFGLLKNLSSLDISSNYLTGSIPPGLGTLSKLQYLNVSNNSLASSIPAQLGDLDSLVDLDLSMNSLSGSVPSELRGLR 286 (766)
Q Consensus 207 p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~l~~l~ 286 (766)
++|+.+.+++|.++. +|. ..|+.|+|++|++++ +|. ++++++|+.|+|++|+++ .+|..+++++
T Consensus 423 -------~~L~~l~l~~n~i~~-l~~-----~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~ 486 (567)
T 1dce_A 423 -------DDLRSKFLLENSVLK-MEY-----ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALR 486 (567)
T ss_dssp -------HHHHHHHHHHHHHHH-HHH-----TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCT
T ss_pred -------chhhhhhhhcccccc-cCc-----cCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCC
Confidence 123333344444442 221 247778888888775 565 777788888888888887 6777788888
Q ss_pred CCCEEEccCccCccccCCCccCCCCcccEEEccCCCCCCCC-CcccCCCCCCCEEEccCCCCCCCCC
Q 004248 287 SLQKFVIGNNFLSGNLSVNLFPTVSQLQIIVLRQNGFTGPP-PDVLWSMPQLRLLDISRNNFTGPLP 352 (766)
Q Consensus 287 ~L~~L~ls~N~l~g~~~~~~~~~l~~L~~L~L~~N~l~~~~-p~~l~~l~~L~~L~Ls~N~l~g~~p 352 (766)
+|+.|+|++|.+++ +| .+..+++|+.|+|++|+|++.+ |..+..+++|+.|+|++|++++.+|
T Consensus 487 ~L~~L~Ls~N~l~~-lp--~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~ 550 (567)
T 1dce_A 487 CLEVLQASDNALEN-VD--GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEG 550 (567)
T ss_dssp TCCEEECCSSCCCC-CG--GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSS
T ss_pred CCCEEECCCCCCCC-Cc--ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCcc
Confidence 88888888888776 55 3577788888888888888876 8888888888888888888887655
No 371
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.75 E-value=1.1e-18 Score=181.28 Aligned_cols=146 Identities=27% Similarity=0.317 Sum_probs=66.9
Q ss_pred CCCCCEEEccCCCCCccCCcccCCCCCCcEEEeecCcCCCCCCccccCCCCCCEEEccCCCCCCCCCcccCCCCCCCEEe
Q 004248 141 LPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPSSLGQLSVLSVLDLSRNSLTGNIPTSFGLLKNLSSLD 220 (766)
Q Consensus 141 l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 220 (766)
+++|++|++++|.++. +| .+..+++|++|+|++|++++. |. +.++++|++|+|++|++++ +|.. .. ++|+.|+
T Consensus 40 l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~-~~-l~~l~~L~~L~L~~N~l~~-l~~~-~~-~~L~~L~ 112 (263)
T 1xeu_A 40 LSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDL-SP-LKDLTKLEELSVNRNRLKN-LNGI-PS-ACLSRLF 112 (263)
T ss_dssp HTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCSSCCEEECCSSCCSC-CTTC-CC-SSCCEEE
T ss_pred cCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCC-hh-hccCCCCCEEECCCCccCC-cCcc-cc-CcccEEE
Confidence 4555555555555542 22 344555555555555555432 22 4555555555555555543 2221 11 4455555
Q ss_pred ccCCcCCCCCCCCCCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccCCCCCCCEEEccCccCc
Q 004248 221 ISSNYLTGSIPPGLGTLSKLQYLNVSNNSLASSIPAQLGDLDSLVDLDLSMNSLSGSVPSELRGLRSLQKFVIGNNFLS 299 (766)
Q Consensus 221 Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~ 299 (766)
|++|++++ +| .+..+++|++|+|++|++++. | .++.+++|++|++++|++++. ..+..+++|+.|++++|.++
T Consensus 113 L~~N~l~~-~~-~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~ 185 (263)
T 1xeu_A 113 LDNNELRD-TD-SLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCV 185 (263)
T ss_dssp CCSSCCSB-SG-GGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEE
T ss_pred ccCCccCC-Ch-hhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCccc
Confidence 55554443 12 344444444444444444432 2 344444444444444444433 33444444444444444443
No 372
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.72 E-value=6.9e-18 Score=175.27 Aligned_cols=173 Identities=20% Similarity=0.241 Sum_probs=147.3
Q ss_pred CCCCCEEEccCCCCCccCCcccCCCCCCcEEEeecCcCCCCCCccccCCCCCCEEEccCCCCCCCCCcccCCCCCCCEEe
Q 004248 141 LPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPSSLGQLSVLSVLDLSRNSLTGNIPTSFGLLKNLSSLD 220 (766)
Q Consensus 141 l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 220 (766)
+.++..+++++|.+++.. .+..+++|++|++++|.++ .+| .+..+++|++|+|++|++++..| +..+++|+.|+
T Consensus 18 l~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~ 91 (263)
T 1xeu_A 18 LANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELS 91 (263)
T ss_dssp HHHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEE
T ss_pred HHHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEE
Confidence 556778889999988654 5788999999999999998 466 68899999999999999987544 99999999999
Q ss_pred ccCCcCCCCCCCCCCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccCCCCCCCEEEccCccCcc
Q 004248 221 ISSNYLTGSIPPGLGTLSKLQYLNVSNNSLASSIPAQLGDLDSLVDLDLSMNSLSGSVPSELRGLRSLQKFVIGNNFLSG 300 (766)
Q Consensus 221 Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g 300 (766)
|++|++++ +|.. .. ++|++|+|++|++++. | .+..+++|++|++++|++++. | .+..+++|+.|++++|.+++
T Consensus 92 L~~N~l~~-l~~~-~~-~~L~~L~L~~N~l~~~-~-~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~ 164 (263)
T 1xeu_A 92 VNRNRLKN-LNGI-PS-ACLSRLFLDNNELRDT-D-SLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEITN 164 (263)
T ss_dssp CCSSCCSC-CTTC-CC-SSCCEEECCSSCCSBS-G-GGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCCB
T ss_pred CCCCccCC-cCcc-cc-CcccEEEccCCccCCC-h-hhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCcc
Confidence 99999986 5543 33 8999999999999863 4 589999999999999999875 4 68899999999999999987
Q ss_pred ccCCCccCCCCcccEEEccCCCCCCCCCc
Q 004248 301 NLSVNLFPTVSQLQIIVLRQNGFTGPPPD 329 (766)
Q Consensus 301 ~~~~~~~~~l~~L~~L~L~~N~l~~~~p~ 329 (766)
. ..+..+++|+.|++++|.+++.+..
T Consensus 165 ~---~~l~~l~~L~~L~l~~N~~~~~~~~ 190 (263)
T 1xeu_A 165 T---GGLTRLKKVNWIDLTGQKCVNEPVK 190 (263)
T ss_dssp C---TTSTTCCCCCEEEEEEEEEECCCEE
T ss_pred h---HHhccCCCCCEEeCCCCcccCCccc
Confidence 5 3468899999999999999877543
No 373
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.71 E-value=3.8e-17 Score=161.18 Aligned_cols=109 Identities=29% Similarity=0.432 Sum_probs=45.3
Q ss_pred CCcEEEeecCcCCCCCCc-cccCCCCCCEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCCCCCCCccEEEc
Q 004248 167 NLTSLYLSDNGLTGTIPS-SLGQLSVLSVLDLSRNSLTGNIPTSFGLLKNLSSLDISSNYLTGSIPPGLGTLSKLQYLNV 245 (766)
Q Consensus 167 ~L~~L~Ls~N~l~~~~p~-~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 245 (766)
+|++|+|++|++++..+. .+.++++|++|+|++|++++..|..|.++++|+.|+|++|++++..|..|.++++|++|+|
T Consensus 30 ~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 109 (192)
T 1w8a_A 30 HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNL 109 (192)
T ss_dssp TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEEC
T ss_pred CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEEC
Confidence 444444444444433222 2344444444444444444444444444444444444444444333333444444444444
Q ss_pred cCCCCCCCCccccCCCCCCCEEEccCCcCC
Q 004248 246 SNNSLASSIPAQLGDLDSLVDLDLSMNSLS 275 (766)
Q Consensus 246 s~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 275 (766)
++|++++..|..+..+++|++|+|++|.++
T Consensus 110 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 139 (192)
T 1w8a_A 110 YDNQISCVMPGSFEHLNSLTSLNLASNPFN 139 (192)
T ss_dssp CSSCCCEECTTSSTTCTTCCEEECTTCCBC
T ss_pred CCCcCCeeCHHHhhcCCCCCEEEeCCCCcc
Confidence 444444433444444444444444444433
No 374
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.71 E-value=5.8e-17 Score=159.85 Aligned_cols=132 Identities=27% Similarity=0.329 Sum_probs=113.0
Q ss_pred cEEEeecCcCCCCCCccccCCCCCCEEEccCCCCCCCCCc-ccCCCCCCCEEeccCCcCCCCCCCCCCCCCCccEEEccC
Q 004248 169 TSLYLSDNGLTGTIPSSLGQLSVLSVLDLSRNSLTGNIPT-SFGLLKNLSSLDISSNYLTGSIPPGLGTLSKLQYLNVSN 247 (766)
Q Consensus 169 ~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~ 247 (766)
+++++++|+++ .+|..+.. +|++|+|++|++++..+. .|+.+++|++|+|++|++++..|..|.++++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 67788888885 57776654 899999999999876664 488999999999999999988888999999999999999
Q ss_pred CCCCCCCccccCCCCCCCEEEccCCcCCccCCcccCCCCCCCEEEccCccCccccC
Q 004248 248 NSLASSIPAQLGDLDSLVDLDLSMNSLSGSVPSELRGLRSLQKFVIGNNFLSGNLS 303 (766)
Q Consensus 248 N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~~~ 303 (766)
|++++..|..|.++++|++|+|++|++++..|..+..+++|++|++++|.+++..+
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 99998888888899999999999999998888888888888888888888876544
No 375
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.69 E-value=4.3e-17 Score=157.00 Aligned_cols=133 Identities=27% Similarity=0.263 Sum_probs=92.9
Q ss_pred CCCCCEEEccCCCCC-ccCCcccCCCCCCcEEEeecCcCCCCCCccccCCCCCCEEEccCCCCCCCCCcccCCCCCCCEE
Q 004248 141 LPTLQALDLRSCSIS-GVIPFSLGNLTNLTSLYLSDNGLTGTIPSSLGQLSVLSVLDLSRNSLTGNIPTSFGLLKNLSSL 219 (766)
Q Consensus 141 l~~L~~L~Ls~N~l~-g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 219 (766)
.++|++|+|++|.++ +.+|..+..+++|++|+|++|.+++. ..+..+++|++|+|++|++++.+|..+..+++|++|
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 456777777777776 66777777777777777777777754 667777777777777777776667666667777777
Q ss_pred eccCCcCCCCC-CCCCCCCCCccEEEccCCCCCCCCc---cccCCCCCCCEEEccCCcCC
Q 004248 220 DISSNYLTGSI-PPGLGTLSKLQYLNVSNNSLASSIP---AQLGDLDSLVDLDLSMNSLS 275 (766)
Q Consensus 220 ~Ls~N~l~~~~-p~~l~~l~~L~~L~Ls~N~l~~~~p---~~l~~l~~L~~L~Ls~N~l~ 275 (766)
+|++|.+++.. +..+..+++|++|++++|.+++..+ ..+..+++|++|++++|.+.
T Consensus 101 ~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 101 NLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp ECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred eccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 77777776431 1556667777777777777765444 35666777777777776665
No 376
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.68 E-value=2e-19 Score=209.03 Aligned_cols=227 Identities=16% Similarity=0.140 Sum_probs=103.5
Q ss_pred cCCCCCEEecCCC-CCCCC-CchhhhhCCCCCCEEEccCCCCCccCCccc----CCCCCCcEEEeecCc--CCCC-CCcc
Q 004248 115 NLTHLASFNASRF-LLPGS-IPDWLGQQLPTLQALDLRSCSISGVIPFSL----GNLTNLTSLYLSDNG--LTGT-IPSS 185 (766)
Q Consensus 115 ~l~~L~~L~ls~n-~l~g~-ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~l----~~l~~L~~L~Ls~N~--l~~~-~p~~ 185 (766)
++++|+.|++++| .+... ++. +...+++|++|+|++|.+++..+..+ ..+++|++|+|++|. ++.. ++..
T Consensus 128 ~~~~L~~L~L~~~~~~~~~~l~~-~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~l~~l 206 (594)
T 2p1m_B 128 SFKNFKVLVLSSCEGFSTDGLAA-IAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLASEVSFSALERL 206 (594)
T ss_dssp HCTTCCEEEEESCEEEEHHHHHH-HHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECTTCCSCCCHHHHHHH
T ss_pred hCCCCcEEeCCCcCCCCHHHHHH-HHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEecccCCcCCHHHHHHH
Confidence 4555666666555 22221 222 22225566666666665544332222 244556666666554 1100 1111
Q ss_pred ccCCCCCCEEEccCCCCCCCCCcccCCCCCCCEEeccCCc--------------------------CCC----CCCCCCC
Q 004248 186 LGQLSVLSVLDLSRNSLTGNIPTSFGLLKNLSSLDISSNY--------------------------LTG----SIPPGLG 235 (766)
Q Consensus 186 l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~--------------------------l~~----~~p~~l~ 235 (766)
+.++++|++|+|++|...+.+|..+..+++|+.|+++.+. +.. .+|..+.
T Consensus 207 ~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~~l~~~~~L~~Ls~~~~~~~~~l~~~~~ 286 (594)
T 2p1m_B 207 VTRCPNLKSLKLNRAVPLEKLATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVALSGCKELRCLSGFWDAVPAYLPAVYS 286 (594)
T ss_dssp HHHCTTCCEEECCTTSCHHHHHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHHHHHTCTTCCEEECCBTCCGGGGGGGHH
T ss_pred HHhCCCCcEEecCCCCcHHHHHHHHhcCCcceEcccccccCccchhhHHHHHHHHhcCCCcccccCCcccchhhHHHHHH
Confidence 2234556666665552111234444444444444433221 111 1222222
Q ss_pred CCCCccEEEccCCCCCCCCc-cccCCCCCCCEEEccCCcCCc-cCCcccCCCCCCCEEEcc---------CccCccccCC
Q 004248 236 TLSKLQYLNVSNNSLASSIP-AQLGDLDSLVDLDLSMNSLSG-SVPSELRGLRSLQKFVIG---------NNFLSGNLSV 304 (766)
Q Consensus 236 ~l~~L~~L~Ls~N~l~~~~p-~~l~~l~~L~~L~Ls~N~l~g-~~p~~l~~l~~L~~L~ls---------~N~l~g~~~~ 304 (766)
.+++|++|+|++|.+++... ..+.++++|++|++++| +.. .++.....+++|++|+++ .|.+++....
T Consensus 287 ~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~ 365 (594)
T 2p1m_B 287 VCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLV 365 (594)
T ss_dssp HHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHH
T ss_pred hhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHH
Confidence 45778888888887654322 22456777777777776 322 122222345666666662 2333321111
Q ss_pred CccCCCCcccEEEccCCCCCCCCCcccC-CCCCCCEEEcc
Q 004248 305 NLFPTVSQLQIIVLRQNGFTGPPPDVLW-SMPQLRLLDIS 343 (766)
Q Consensus 305 ~~~~~l~~L~~L~L~~N~l~~~~p~~l~-~l~~L~~L~Ls 343 (766)
.+...+++|+.|+++.|++++..+..+. .+++|+.|+++
T Consensus 366 ~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~ 405 (594)
T 2p1m_B 366 SVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLC 405 (594)
T ss_dssp HHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEE
T ss_pred HHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEee
Confidence 1112244555555555555443333332 35555555555
No 377
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.66 E-value=3.4e-17 Score=176.61 Aligned_cols=136 Identities=13% Similarity=0.121 Sum_probs=99.1
Q ss_pred CCCccceeecCCcceEEEEEEcCCcEEEEEEeecccc---------------CHHHH--------HHHHHHHhhcCCCCc
Q 004248 535 DFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSV---------------KTEAY--------LLELDFFSKVSHARL 591 (766)
Q Consensus 535 ~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~---------------~~~~~--------~~E~~~l~~l~H~ni 591 (766)
-|+..+.||+|+||.||+|...+|+.||||.++.... ..... .+|...|.++.+..+
T Consensus 96 iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv 175 (397)
T 4gyi_A 96 VYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGF 175 (397)
T ss_dssp CSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 4888999999999999999988999999998753211 01122 346666666654443
Q ss_pred ccceeEEEecCCcEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCe
Q 004248 592 VPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSI 671 (766)
Q Consensus 592 v~l~~~~~~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NI 671 (766)
....-+... ..++||||++|++|.++... +....++.|++.+|.|||+. +||||||||.||
T Consensus 176 ~vp~p~~~~---~~~LVME~i~G~~L~~l~~~-------------~~~~~l~~qll~~l~~lH~~---gIVHrDLKp~NI 236 (397)
T 4gyi_A 176 PVPEPIAQS---RHTIVMSLVDALPMRQVSSV-------------PDPASLYADLIALILRLAKH---GLIHGDFNEFNI 236 (397)
T ss_dssp SCCCEEEEE---TTEEEEECCSCEEGGGCCCC-------------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSE
T ss_pred CCCeeeecc---CceEEEEecCCccHhhhccc-------------HHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHE
Confidence 222111111 24799999999888665421 12346789999999999997 999999999999
Q ss_pred eeCCCCc----------EEeccchhhhh
Q 004248 672 LLDDKFE----------VRLGSLSEVCA 689 (766)
Q Consensus 672 Ll~~~~~----------~kl~DFG~a~~ 689 (766)
|+++++. +.|+||+-+..
T Consensus 237 Ll~~dgd~~d~~~~~~~~~iID~~Q~V~ 264 (397)
T 4gyi_A 237 LIREEKDAEDPSSITLTPIIIXFPQMVS 264 (397)
T ss_dssp EEEEEECSSCTTSEEEEEEECCCTTCEE
T ss_pred EEeCCCCcccccccccceEEEEeCCccc
Confidence 9998773 88999996643
No 378
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.66 E-value=8.2e-19 Score=203.80 Aligned_cols=287 Identities=16% Similarity=0.163 Sum_probs=195.3
Q ss_pred hccCCCCCEEecCCCCCCCCCchhhhhCCCCCCEEEccCC-CCCcc-CCcccCCCCCCcEEEeecCcCCCCCCcccc---
Q 004248 113 LVNLTHLASFNASRFLLPGSIPDWLGQQLPTLQALDLRSC-SISGV-IPFSLGNLTNLTSLYLSDNGLTGTIPSSLG--- 187 (766)
Q Consensus 113 l~~l~~L~~L~ls~n~l~g~ip~~~~~~l~~L~~L~Ls~N-~l~g~-~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~--- 187 (766)
...+++|+.|++++|.+++..+..+...+++|++|+|++| .++.. ++..+.++++|++|+|++|.+++..+..+.
T Consensus 101 ~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~ 180 (594)
T 2p1m_B 101 SSSYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFP 180 (594)
T ss_dssp HHHCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSC
T ss_pred HHhCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHh
Confidence 3578899999999999888777777645899999999999 55432 444556899999999999998765554443
Q ss_pred -CCCCCCEEEccCCC--CCC-CCCcccCCCCCCCEEeccCCcCCCCCCCCCCCCCCccEEEccCCC--------------
Q 004248 188 -QLSVLSVLDLSRNS--LTG-NIPTSFGLLKNLSSLDISSNYLTGSIPPGLGTLSKLQYLNVSNNS-------------- 249 (766)
Q Consensus 188 -~L~~L~~L~Ls~N~--l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~-------------- 249 (766)
.+++|++|++++|. ++. .++..+.++++|+.|+|++|...+.+|..+..+++|+.|+++.+.
T Consensus 181 ~~~~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~~ 260 (594)
T 2p1m_B 181 DTYTSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEKLATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVA 260 (594)
T ss_dssp TTCCCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHHHHHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHHH
T ss_pred hcCCcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHHHHHHHHhcCCcceEcccccccCccchhhHHHHHHH
Confidence 67799999999987 221 111223457999999999983222366667777888888765542
Q ss_pred ------------CCC----CCccccCCCCCCCEEEccCCcCCccC-CcccCCCCCCCEEEccCccCccccCCCccCCCCc
Q 004248 250 ------------LAS----SIPAQLGDLDSLVDLDLSMNSLSGSV-PSELRGLRSLQKFVIGNNFLSGNLSVNLFPTVSQ 312 (766)
Q Consensus 250 ------------l~~----~~p~~l~~l~~L~~L~Ls~N~l~g~~-p~~l~~l~~L~~L~ls~N~l~g~~~~~~~~~l~~ 312 (766)
+.. .+|..+..+++|++|+|++|.+++.. +..+.++++|+.|++++| ++......+...+++
T Consensus 261 l~~~~~L~~Ls~~~~~~~~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~ 339 (594)
T 2p1m_B 261 LSGCKELRCLSGFWDAVPAYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKD 339 (594)
T ss_dssp HHTCTTCCEEECCBTCCGGGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTT
T ss_pred HhcCCCcccccCCcccchhhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCC
Confidence 111 13333346789999999999987543 334678999999999988 442222222335788
Q ss_pred ccEEEcc---------CCCCCCCCCccc-CCCCCCCEEEccCCCCCCCCCcccccCCCCCcEEEcc--C----CcCccC-
Q 004248 313 LQIIVLR---------QNGFTGPPPDVL-WSMPQLRLLDISRNNFTGPLPNSRSNVNTSTVELNIS--Q----NMFYGG- 375 (766)
Q Consensus 313 L~~L~L~---------~N~l~~~~p~~l-~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~L~ls--~----N~l~g~- 375 (766)
|+.|+++ .|.+++.....+ ..+++|+.|+++.|++++..+......+++|+.|+++ + |.++..
T Consensus 340 L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~ 419 (594)
T 2p1m_B 340 LRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEP 419 (594)
T ss_dssp CCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCC
T ss_pred CCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCc
Confidence 9999983 355554333333 3489999999999999865443333346788999998 3 444421
Q ss_pred ----C---CcCCCCCCEEeccCCcCccccChhh
Q 004248 376 ----L---TPVLGRFRLVDLSGNYFEGRVPEYV 401 (766)
Q Consensus 376 ----~---~~~l~~l~~ldLs~N~l~g~~p~~~ 401 (766)
+ ...+++|+.|+|++ .+++..+..+
T Consensus 420 ~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l 451 (594)
T 2p1m_B 420 LDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYI 451 (594)
T ss_dssp THHHHHHHHHHCTTCCEEECCS-SCCHHHHHHH
T ss_pred hhhHHHHHHhhCCCccEEeecC-cccHHHHHHH
Confidence 1 12356777888866 5655444443
No 379
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.66 E-value=1.9e-16 Score=152.46 Aligned_cols=132 Identities=24% Similarity=0.217 Sum_probs=83.8
Q ss_pred CCCCEEEccCCCCC-CCCCcccCCCCCCCEEeccCCcCCCCCCCCCCCCCCccEEEccCCCCCCCCccccCCCCCCCEEE
Q 004248 190 SVLSVLDLSRNSLT-GNIPTSFGLLKNLSSLDISSNYLTGSIPPGLGTLSKLQYLNVSNNSLASSIPAQLGDLDSLVDLD 268 (766)
Q Consensus 190 ~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 268 (766)
++|++|++++|+++ +.+|..+..+++|+.|+|++|.+++. ..+..+++|++|+|++|++++.+|..+.++++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 56777777777776 56666666677777777777776644 5566666666666666666665666555566666666
Q ss_pred ccCCcCCccC-CcccCCCCCCCEEEccCccCccccCCCccCCCCcccEEEccCCCCCCCCC---cccCCCCCCCEEEccC
Q 004248 269 LSMNSLSGSV-PSELRGLRSLQKFVIGNNFLSGNLSVNLFPTVSQLQIIVLRQNGFTGPPP---DVLWSMPQLRLLDISR 344 (766)
Q Consensus 269 Ls~N~l~g~~-p~~l~~l~~L~~L~ls~N~l~g~~~~~~~~~l~~L~~L~L~~N~l~~~~p---~~l~~l~~L~~L~Ls~ 344 (766)
+++|++++.. +..+.. +++|+.|++++|.+++.++ ..+..+++|++|++++
T Consensus 102 Ls~N~l~~~~~~~~l~~-------------------------l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~ 156 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKK-------------------------LECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYD 156 (168)
T ss_dssp CBSSSCCSSGGGGGGSS-------------------------CSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEE
T ss_pred ccCCccCcchhHHHHhc-------------------------CCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCC
Confidence 6666665421 134444 4455555555555555444 4667777777777777
Q ss_pred CCCC
Q 004248 345 NNFT 348 (766)
Q Consensus 345 N~l~ 348 (766)
|.+.
T Consensus 157 n~~~ 160 (168)
T 2ell_A 157 REDQ 160 (168)
T ss_dssp TTSC
T ss_pred CChh
Confidence 7766
No 380
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.66 E-value=4e-17 Score=153.85 Aligned_cols=128 Identities=23% Similarity=0.234 Sum_probs=78.7
Q ss_pred CCCCCEEEccCCCCC-ccCCcccCCCCCCcEEEeecCcCCCCCCccccCCCCCCEEEccCCCCCCCCCcccCCCCCCCEE
Q 004248 141 LPTLQALDLRSCSIS-GVIPFSLGNLTNLTSLYLSDNGLTGTIPSSLGQLSVLSVLDLSRNSLTGNIPTSFGLLKNLSSL 219 (766)
Q Consensus 141 l~~L~~L~Ls~N~l~-g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 219 (766)
.++|+.|++++|.++ +.+|..+..+++|++|+|++|.+++. ..+.++++|++|+|++|++++.+|..+..+++|++|
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 345677777777776 56666666677777777777766654 556666666666666666666566666566666666
Q ss_pred eccCCcCCCC-CCCCCCCCCCccEEEccCCCCCCCCc---cccCCCCCCCEEEcc
Q 004248 220 DISSNYLTGS-IPPGLGTLSKLQYLNVSNNSLASSIP---AQLGDLDSLVDLDLS 270 (766)
Q Consensus 220 ~Ls~N~l~~~-~p~~l~~l~~L~~L~Ls~N~l~~~~p---~~l~~l~~L~~L~Ls 270 (766)
++++|.+++. .|..+..+++|++|++++|.+++..+ ..+..+++|++|+++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 6666666542 22455555666666666665554433 345555555555554
No 381
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.65 E-value=8.8e-16 Score=151.48 Aligned_cols=127 Identities=26% Similarity=0.396 Sum_probs=63.7
Q ss_pred CEEEccCCCCCccCCcccCCCCCCcEEEeecCcCCCCCCccccCCCCCCEEEccCCCCCCCCCcccCCCCCCCEEeccCC
Q 004248 145 QALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPSSLGQLSVLSVLDLSRNSLTGNIPTSFGLLKNLSSLDISSN 224 (766)
Q Consensus 145 ~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 224 (766)
+++++++|.++ .+|..+. ++|++|+|++|+++ .+|..|.++++|++|+|++|++++..|..|.++++|+.|+|++|
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 34555555554 2333322 34555555555554 44455555555555555555555544445555555555555555
Q ss_pred cCCCCCCCCCCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCcCC
Q 004248 225 YLTGSIPPGLGTLSKLQYLNVSNNSLASSIPAQLGDLDSLVDLDLSMNSLS 275 (766)
Q Consensus 225 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 275 (766)
.+++..|..|..+++|++|+|++|++++..+..|..+++|+.|+|++|.+.
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLY 139 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEE
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCee
Confidence 555444444555555555555555554433334444455555555554443
No 382
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.65 E-value=1.4e-15 Score=147.75 Aligned_cols=130 Identities=24% Similarity=0.259 Sum_probs=64.5
Q ss_pred CEEEccCCCCCccCCcccCCCCCCcEEEeecCcCCCCCCccccCCCCCCEEEccCCCCCCCCCcccCCCCCCCEEeccCC
Q 004248 145 QALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPSSLGQLSVLSVLDLSRNSLTGNIPTSFGLLKNLSSLDISSN 224 (766)
Q Consensus 145 ~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 224 (766)
+.+++++|+++. +|..+ .++|++|+|++|++++..+..+.++++|++|+|++|++++..+..|..+++|+.|+|++|
T Consensus 10 ~~l~~~~~~l~~-~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 86 (177)
T 2o6r_A 10 TEIRCNSKGLTS-VPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHEN 86 (177)
T ss_dssp TEEECCSSCCSS-CCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCCcc-CCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCC
Confidence 345555555542 22222 234555555555555444444455555555555555555444444455555555555555
Q ss_pred cCCCCCCCCCCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCcc
Q 004248 225 YLTGSIPPGLGTLSKLQYLNVSNNSLASSIPAQLGDLDSLVDLDLSMNSLSGS 277 (766)
Q Consensus 225 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ 277 (766)
.+++..+..+..+++|++|+|++|++++..+..+..+++|++|+|++|.+++.
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 139 (177)
T 2o6r_A 87 KLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 139 (177)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred CccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeecc
Confidence 55544444445555555555555555543333344455555555555555443
No 383
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.64 E-value=1.9e-15 Score=146.72 Aligned_cols=132 Identities=27% Similarity=0.297 Sum_probs=98.4
Q ss_pred CcEEEeecCcCCCCCCccccCCCCCCEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCCCCCCCccEEEccC
Q 004248 168 LTSLYLSDNGLTGTIPSSLGQLSVLSVLDLSRNSLTGNIPTSFGLLKNLSSLDISSNYLTGSIPPGLGTLSKLQYLNVSN 247 (766)
Q Consensus 168 L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~ 247 (766)
.+.+++++|+++ .+|..+. ++|++|++++|++++..+..|..+++|++|+|++|.+++..+..+..+++|++|+|++
T Consensus 9 ~~~l~~~~~~l~-~~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 9 GTEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TTEEECCSSCCS-SCCTTCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCc-cCCCCCC--CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 467888888877 4565443 6788888888888876666778888888888888888866666677888888888888
Q ss_pred CCCCCCCccccCCCCCCCEEEccCCcCCccCCcccCCCCCCCEEEccCccCcccc
Q 004248 248 NSLASSIPAQLGDLDSLVDLDLSMNSLSGSVPSELRGLRSLQKFVIGNNFLSGNL 302 (766)
Q Consensus 248 N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~~ 302 (766)
|++++..+..+.++++|++|++++|++++..+..+..+++|++|++++|.+.+..
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 140 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 140 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccC
Confidence 8888766666777888888888888887655555677777777777777766543
No 384
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.64 E-value=8.1e-17 Score=151.73 Aligned_cols=127 Identities=20% Similarity=0.230 Sum_probs=76.5
Q ss_pred CCCcEEEeecCcCC-CCCCccccCCCCCCEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCCCCCCCccEEE
Q 004248 166 TNLTSLYLSDNGLT-GTIPSSLGQLSVLSVLDLSRNSLTGNIPTSFGLLKNLSSLDISSNYLTGSIPPGLGTLSKLQYLN 244 (766)
Q Consensus 166 ~~L~~L~Ls~N~l~-~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 244 (766)
++|+.|++++|.++ +.+|..+..+++|++|++++|++++. ..++.+++|++|+|++|.+++.+|..+..+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 55666666666666 56666666666666666666666654 5566666666666666666655555555566666666
Q ss_pred ccCCCCCCC-CccccCCCCCCCEEEccCCcCCccCC---cccCCCCCCCEEEcc
Q 004248 245 VSNNSLASS-IPAQLGDLDSLVDLDLSMNSLSGSVP---SELRGLRSLQKFVIG 294 (766)
Q Consensus 245 Ls~N~l~~~-~p~~l~~l~~L~~L~Ls~N~l~g~~p---~~l~~l~~L~~L~ls 294 (766)
+++|.+++. .|..++.+++|++|++++|++++..+ ..+..+++|+.|+++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 666666542 23555566666666666666655443 345555555555543
No 385
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.64 E-value=1.4e-15 Score=150.05 Aligned_cols=128 Identities=27% Similarity=0.342 Sum_probs=105.6
Q ss_pred cEEEeecCcCCCCCCccccCCCCCCEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCCCCCCCccEEEccCC
Q 004248 169 TSLYLSDNGLTGTIPSSLGQLSVLSVLDLSRNSLTGNIPTSFGLLKNLSSLDISSNYLTGSIPPGLGTLSKLQYLNVSNN 248 (766)
Q Consensus 169 ~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N 248 (766)
+++++++|.++ .+|..+. ++|++|+|++|+++ .+|..|.++++|+.|+|++|.+++..|..|.++++|++|+|++|
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 57888888887 5776654 57889999999887 67788888899999999999988777778888888888888888
Q ss_pred CCCCCCccccCCCCCCCEEEccCCcCCccCCcccCCCCCCCEEEccCccCcc
Q 004248 249 SLASSIPAQLGDLDSLVDLDLSMNSLSGSVPSELRGLRSLQKFVIGNNFLSG 300 (766)
Q Consensus 249 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g 300 (766)
++++..|..|.++++|++|+|++|++++..+..|..+++|+.|++++|.+..
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 8888877788888888888888888886666677788888888888887753
No 386
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.57 E-value=2e-15 Score=161.99 Aligned_cols=237 Identities=15% Similarity=0.137 Sum_probs=123.5
Q ss_pred CCCCCEEecCCCCCCCCCchhhhhCCCCCCEEEccCCCCC--ccCCcccCCCCCCcEEEeecCcCCCCCCccccC-----
Q 004248 116 LTHLASFNASRFLLPGSIPDWLGQQLPTLQALDLRSCSIS--GVIPFSLGNLTNLTSLYLSDNGLTGTIPSSLGQ----- 188 (766)
Q Consensus 116 l~~L~~L~ls~n~l~g~ip~~~~~~l~~L~~L~Ls~N~l~--g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~----- 188 (766)
+.+++.|.++++- .+.--..+...+++|++|||++|.+. ...+.. ++.++.+.+..|.+. +..|.+
T Consensus 24 ~~~l~~L~l~g~i-~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~~~---~~~~~~~~~~~~~I~---~~aF~~~~~~~ 96 (329)
T 3sb4_A 24 ANSITHLTLTGKL-NAEDFRHLRDEFPSLKVLDISNAEIKMYSGKAGT---YPNGKFYIYMANFVP---AYAFSNVVNGV 96 (329)
T ss_dssp HHHCSEEEEEEEE-CHHHHHHHHHSCTTCCEEEEEEEEECCEEESSSS---SGGGCCEEECTTEEC---TTTTEEEETTE
T ss_pred hCceeEEEEeccc-cHHHHHHHHHhhccCeEEecCcceeEEecCcccc---ccccccccccccccC---HHHhccccccc
Confidence 4566777776431 11001123333788999999999987 222222 222344444444321 233444
Q ss_pred ---CCCCCEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCCCCCCCccEEEccCCCC----CCCCccccC--
Q 004248 189 ---LSVLSVLDLSRNSLTGNIPTSFGLLKNLSSLDISSNYLTGSIPPGLGTLSKLQYLNVSNNSL----ASSIPAQLG-- 259 (766)
Q Consensus 189 ---L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l----~~~~p~~l~-- 259 (766)
+++|+.|+|.+ +++..-+..|.+|++|+.|++++|.++...+..|..+.++..+.+..+.. ...-+..|.
T Consensus 97 ~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~ 175 (329)
T 3sb4_A 97 TKGKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEG 175 (329)
T ss_dssp EEECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEES
T ss_pred ccccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccc
Confidence 66666666666 56555555666666677777766666544555566665555555443110 000011111
Q ss_pred ------------------------------------------------CCCCCCEEEccCCcCCccCCcccCCCCCCCEE
Q 004248 260 ------------------------------------------------DLDSLVDLDLSMNSLSGSVPSELRGLRSLQKF 291 (766)
Q Consensus 260 ------------------------------------------------~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L 291 (766)
.+++|+.|+|++|+++...+..|.++++|+.+
T Consensus 176 ~~L~~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l 255 (329)
T 3sb4_A 176 EPLETTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKI 255 (329)
T ss_dssp CCCEEEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEE
T ss_pred cccceeEEecCCCcHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEE
Confidence 14556666666655554444555566666666
Q ss_pred EccCccCccccCCCccCCCCccc-EEEccCCCCCCCCCcccCCCCCCCEEEccCCCCCCCCCcccccCCCCCcE
Q 004248 292 VIGNNFLSGNLSVNLFPTVSQLQ-IIVLRQNGFTGPPPDVLWSMPQLRLLDISRNNFTGPLPNSRSNVNTSTVE 364 (766)
Q Consensus 292 ~ls~N~l~g~~~~~~~~~l~~L~-~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~ 364 (766)
++.+| +. .++...|.++.+|+ .+++.+ +++...+..|.++++|+.|++++|+++ .++...+..+.+|+.
T Consensus 256 ~l~~n-i~-~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~-~I~~~aF~~~~~L~~ 325 (329)
T 3sb4_A 256 KLPHN-LK-TIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKIT-TLGDELFGNGVPSKL 325 (329)
T ss_dssp ECCTT-CC-EECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCC-EECTTTTCTTCCCCE
T ss_pred ECCcc-cc-eehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccC-ccchhhhcCCcchhh
Confidence 66555 32 35555555555565 566555 555555555666666666666555555 333333333344443
No 387
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.57 E-value=7.8e-15 Score=157.40 Aligned_cols=220 Identities=10% Similarity=0.133 Sum_probs=154.8
Q ss_pred hhcc-CCCCCEEecCCCCCC--CCCchhhhhCCCCCCEEEccCCCCCccCCcccCC--------CCCCcEEEeecCcCCC
Q 004248 112 ALVN-LTHLASFNASRFLLP--GSIPDWLGQQLPTLQALDLRSCSISGVIPFSLGN--------LTNLTSLYLSDNGLTG 180 (766)
Q Consensus 112 ~l~~-l~~L~~L~ls~n~l~--g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~--------l~~L~~L~Ls~N~l~~ 180 (766)
.+.. +++|+.|||++|.+. ...+. .++.++.+++..|.+ .+..|.+ +++|+.|+|.+ .++.
T Consensus 43 ~l~~~l~~L~~LdLs~n~i~~~~~~~~----~~~~~~~~~~~~~~I---~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~ 114 (329)
T 3sb4_A 43 HLRDEFPSLKVLDISNAEIKMYSGKAG----TYPNGKFYIYMANFV---PAYAFSNVVNGVTKGKQTLEKVILSE-KIKN 114 (329)
T ss_dssp HHHHSCTTCCEEEEEEEEECCEEESSS----SSGGGCCEEECTTEE---CTTTTEEEETTEEEECTTCCC-CBCT-TCCE
T ss_pred HHHHhhccCeEEecCcceeEEecCccc----ccccccccccccccc---CHHHhcccccccccccCCCcEEECCc-cccc
Confidence 3444 889999999999876 11110 022233444444422 1233444 67777777766 6664
Q ss_pred CCCccccCCCCCCEEEccCCCCCCCCCcccCCCCCCCEEeccCCcC----CC----------------------CCCC--
Q 004248 181 TIPSSLGQLSVLSVLDLSRNSLTGNIPTSFGLLKNLSSLDISSNYL----TG----------------------SIPP-- 232 (766)
Q Consensus 181 ~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l----~~----------------------~~p~-- 232 (766)
.-+..|.++++|+.|++++|.++...+..|.++.++..+.+..+.. .. .++.
T Consensus 115 I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~~~i~~~~~~~l~~~~ 194 (329)
T 3sb4_A 115 IEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLETTIQVGAMGKLEDEI 194 (329)
T ss_dssp ECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCEEEEEECTTCCHHHHH
T ss_pred hhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccceeEEecCCCcHHHHH
Confidence 4455666777777777777766655556666666666665544211 00 0000
Q ss_pred --------CC------------------CCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccCCCC
Q 004248 233 --------GL------------------GTLSKLQYLNVSNNSLASSIPAQLGDLDSLVDLDLSMNSLSGSVPSELRGLR 286 (766)
Q Consensus 233 --------~l------------------~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~l~~l~ 286 (766)
.+ ..+++|+.|+|++|+++...+..|.++++|++|+|.+| +...-+..|.+++
T Consensus 195 ~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~ 273 (329)
T 3sb4_A 195 MKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCG 273 (329)
T ss_dssp HHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCT
T ss_pred hhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCCh
Confidence 00 02789999999999998777778999999999999998 7777778899999
Q ss_pred CCC-EEEccCccCccccCCCccCCCCcccEEEccCCCCCCCCCcccCCCCCCCEEEc
Q 004248 287 SLQ-KFVIGNNFLSGNLSVNLFPTVSQLQIIVLRQNGFTGPPPDVLWSMPQLRLLDI 342 (766)
Q Consensus 287 ~L~-~L~ls~N~l~g~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L 342 (766)
+|+ .+++.+ .++ .++...|.++++|+.++++.|+++...+..|.++++|+.++.
T Consensus 274 ~L~~~l~l~~-~l~-~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 274 RLAGTLELPA-SVT-AIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp TCCEEEEECT-TCC-EECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred hccEEEEEcc-cce-EEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhcc
Confidence 999 999998 554 678888999999999999999999999999999999999874
No 388
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.55 E-value=1e-17 Score=166.08 Aligned_cols=114 Identities=32% Similarity=0.382 Sum_probs=51.9
Q ss_pred ccCCCCCCcEEEeecCcCCCCCCccccCCCCCCEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCCCCCCCc
Q 004248 161 SLGNLTNLTSLYLSDNGLTGTIPSSLGQLSVLSVLDLSRNSLTGNIPTSFGLLKNLSSLDISSNYLTGSIPPGLGTLSKL 240 (766)
Q Consensus 161 ~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L 240 (766)
.++++++|++|+|++|.+++ +| .+.++++|++|++++|+++ .+|..+..+++|+.|+|++|++++ +| .+..+++|
T Consensus 43 ~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L 117 (198)
T 1ds9_A 43 TLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-LS-GIEKLVNL 117 (198)
T ss_dssp HHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHS
T ss_pred HHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCCEEECcCCcCCc-CC-ccccCCCC
Confidence 34444444444444444443 33 3444444444444444444 234444444444444444444443 22 34444455
Q ss_pred cEEEccCCCCCCCCc-cccCCCCCCCEEEccCCcCCccCC
Q 004248 241 QYLNVSNNSLASSIP-AQLGDLDSLVDLDLSMNSLSGSVP 279 (766)
Q Consensus 241 ~~L~Ls~N~l~~~~p-~~l~~l~~L~~L~Ls~N~l~g~~p 279 (766)
++|++++|++++..+ ..+..+++|++|++++|.+++.+|
T Consensus 118 ~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~ 157 (198)
T 1ds9_A 118 RVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYK 157 (198)
T ss_dssp SEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHH
T ss_pred CEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccc
Confidence 555555555543211 245555555555555555554443
No 389
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.55 E-value=1.5e-17 Score=164.94 Aligned_cols=156 Identities=26% Similarity=0.276 Sum_probs=131.6
Q ss_pred hhccCCCCCEEecCCCCCCCCCch------hhhhCCCCCCEEEccCCCCCccCCcccCCCCCCcEEEeecCcCCCCCCcc
Q 004248 112 ALVNLTHLASFNASRFLLPGSIPD------WLGQQLPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPSS 185 (766)
Q Consensus 112 ~l~~l~~L~~L~ls~n~l~g~ip~------~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~ 185 (766)
.+.....++.++++.+.+.|.+|. .+.. +++|++|+|++|.+++ +| .+.++++|++|+|++|.++ .+|..
T Consensus 13 ~~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~-l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~ 88 (198)
T 1ds9_A 13 IFEERKSVVATEAEKVELHGMIPPIEKMDATLST-LKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENL 88 (198)
T ss_dssp HHHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHH-TTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSH
T ss_pred HHHhcccccCcchheeEeccccCcHhhhhHHHhc-CCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccch
Confidence 355667788888888888888886 7766 9999999999999997 67 8999999999999999998 68888
Q ss_pred ccCCCCCCEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCC-CCCCCCCCccEEEccCCCCCCCCccc-------
Q 004248 186 LGQLSVLSVLDLSRNSLTGNIPTSFGLLKNLSSLDISSNYLTGSIP-PGLGTLSKLQYLNVSNNSLASSIPAQ------- 257 (766)
Q Consensus 186 l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~l~~l~~L~~L~Ls~N~l~~~~p~~------- 257 (766)
+..+++|++|+|++|++++ +| .+..+++|+.|+|++|.+++..+ ..+..+++|++|++++|.+++.+|..
T Consensus 89 ~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~ 166 (198)
T 1ds9_A 89 DAVADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYR 166 (198)
T ss_dssp HHHHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHH
T ss_pred hhcCCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHH
Confidence 8888999999999999986 55 68899999999999999985322 46889999999999999998776653
Q ss_pred ---cCCCCCCCEEEccCCcCC
Q 004248 258 ---LGDLDSLVDLDLSMNSLS 275 (766)
Q Consensus 258 ---l~~l~~L~~L~Ls~N~l~ 275 (766)
+..+++|+.|| +|.++
T Consensus 167 ~~~~~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 167 IEVVKRLPNLKKLD--GMPVD 185 (198)
T ss_dssp HHHHHHCSSCSEEC--CGGGT
T ss_pred HHHHHhCCCcEEEC--CcccC
Confidence 66777888776 55544
No 390
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.52 E-value=5.6e-15 Score=143.37 Aligned_cols=62 Identities=23% Similarity=0.228 Sum_probs=26.0
Q ss_pred CCCCCccEEEccCCCCCCCCcc--ccCCCCCCCEEEccCCcCCccCCcc----cCCCCCCCEEEccCccC
Q 004248 235 GTLSKLQYLNVSNNSLASSIPA--QLGDLDSLVDLDLSMNSLSGSVPSE----LRGLRSLQKFVIGNNFL 298 (766)
Q Consensus 235 ~~l~~L~~L~Ls~N~l~~~~p~--~l~~l~~L~~L~Ls~N~l~g~~p~~----l~~l~~L~~L~ls~N~l 298 (766)
..+++|++|+|++|+++ .+|. .+..+++|++|++++|.++ .+|.. +..+++|+.|+++.|.+
T Consensus 85 ~~l~~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~ 152 (176)
T 1a9n_A 85 QALPDLTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKL 152 (176)
T ss_dssp HHCTTCCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCH
T ss_pred hcCCCCCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCH
Confidence 33444444444444442 2232 3444444444444444443 22322 44444455555544443
No 391
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.52 E-value=6.4e-15 Score=142.93 Aligned_cols=129 Identities=22% Similarity=0.237 Sum_probs=91.0
Q ss_pred CCCCCEEEccCCCCCccCCcccCCCC-CCcEEEeecCcCCCCCCccccCCCCCCEEEccCCCCCCCCCcccCCCCCCCEE
Q 004248 141 LPTLQALDLRSCSISGVIPFSLGNLT-NLTSLYLSDNGLTGTIPSSLGQLSVLSVLDLSRNSLTGNIPTSFGLLKNLSSL 219 (766)
Q Consensus 141 l~~L~~L~Ls~N~l~g~~p~~l~~l~-~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 219 (766)
+++|+.|+|++|.++. +|. +..+. +|++|+|++|.+++. ..+..+++|++|+|++|++++..|..|..+++|++|
T Consensus 18 ~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 93 (176)
T 1a9n_A 18 AVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTEL 93 (176)
T ss_dssp TTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEE
T ss_pred cCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEE
Confidence 6677888888887774 343 44443 788888888877754 567777778888888888775444445777788888
Q ss_pred eccCCcCCCCCCC--CCCCCCCccEEEccCCCCCCCCccc----cCCCCCCCEEEccCCcCC
Q 004248 220 DISSNYLTGSIPP--GLGTLSKLQYLNVSNNSLASSIPAQ----LGDLDSLVDLDLSMNSLS 275 (766)
Q Consensus 220 ~Ls~N~l~~~~p~--~l~~l~~L~~L~Ls~N~l~~~~p~~----l~~l~~L~~L~Ls~N~l~ 275 (766)
+|++|.++ .+|. .+..+++|++|++++|.++ .+|.. +..+++|+.||++.|...
T Consensus 94 ~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 94 ILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp ECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred ECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 88888775 4555 6777777888888888776 34543 677777888887777654
No 392
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.49 E-value=1.6e-13 Score=132.29 Aligned_cols=86 Identities=29% Similarity=0.317 Sum_probs=38.6
Q ss_pred CCCCEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCCCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEc
Q 004248 190 SVLSVLDLSRNSLTGNIPTSFGLLKNLSSLDISSNYLTGSIPPGLGTLSKLQYLNVSNNSLASSIPAQLGDLDSLVDLDL 269 (766)
Q Consensus 190 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 269 (766)
++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|..+++|++|+|++|+|++..+..|.++++|++|+|
T Consensus 30 ~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 109 (170)
T 3g39_A 30 TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWL 109 (170)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCccCEeCHHHhcCCCCCCEEEe
Confidence 34444444444444444444444444444444444444333333444444444444444444433333444444444444
Q ss_pred cCCcCC
Q 004248 270 SMNSLS 275 (766)
Q Consensus 270 s~N~l~ 275 (766)
++|.++
T Consensus 110 ~~N~~~ 115 (170)
T 3g39_A 110 LNNPWD 115 (170)
T ss_dssp CSSCBC
T ss_pred CCCCCC
Confidence 444443
No 393
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.48 E-value=1.8e-13 Score=131.89 Aligned_cols=107 Identities=27% Similarity=0.341 Sum_probs=78.7
Q ss_pred CCEEEccCCCCCccCCcccCCCCCCcEEEeecCcCCCCCCccccCCCCCCEEEccCCCCCCCCCcccCCCCCCCEEeccC
Q 004248 144 LQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPSSLGQLSVLSVLDLSRNSLTGNIPTSFGLLKNLSSLDISS 223 (766)
Q Consensus 144 L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 223 (766)
.+.|++++|.++. +|..+. ++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|.++++|++|+|++
T Consensus 11 ~~~l~~s~n~l~~-ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLAS-VPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcCc-cCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 4567777777764 454442 6777777777777776677777777888888888888766666677788888888888
Q ss_pred CcCCCCCCCCCCCCCCccEEEccCCCCCCC
Q 004248 224 NYLTGSIPPGLGTLSKLQYLNVSNNSLASS 253 (766)
Q Consensus 224 N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ 253 (766)
|++++..+..|..+++|++|+|++|.++..
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 117 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDCA 117 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCTT
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCCC
Confidence 888766556677888888888888877654
No 394
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.48 E-value=1.1e-12 Score=144.33 Aligned_cols=262 Identities=11% Similarity=0.077 Sum_probs=161.7
Q ss_pred CCCCEEecCCCCCCCCCchhhhhCCCCCCEEEccCCCCCccCCcccCCCCCCcEEEeecCcCCCCCCccccCCCCCCEEE
Q 004248 117 THLASFNASRFLLPGSIPDWLGQQLPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPSSLGQLSVLSVLD 196 (766)
Q Consensus 117 ~~L~~L~ls~n~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~ 196 (766)
..+..+.+..+ + ..|+...+.+. +|+.++|..| ++.+-..+|.+. +|+.+.|.. .++..-+..|.++++|+.++
T Consensus 113 ~~l~~i~ip~~-i-~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~ 186 (401)
T 4fdw_A 113 KGYNEIILPNS-V-KSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKAD 186 (401)
T ss_dssp SSCSEEECCTT-C-CEECTTTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEE
T ss_pred CCccEEEECCc-c-CEehHhhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeee
Confidence 44555554432 1 23333333333 6777777665 555555666663 577777774 55545556777777777777
Q ss_pred ccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCCCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCc
Q 004248 197 LSRNSLTGNIPTSFGLLKNLSSLDISSNYLTGSIPPGLGTLSKLQYLNVSNNSLASSIPAQLGDLDSLVDLDLSMNSLSG 276 (766)
Q Consensus 197 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g 276 (766)
|+.|+++......|. ..+|+.+.|..+ ++..-...|.++++|+.+++..| ++..-...|.+ .+|+.+.+. |.++.
T Consensus 187 l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~lp-~~i~~ 261 (401)
T 4fdw_A 187 LSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKLP-NGVTN 261 (401)
T ss_dssp CTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEEE-TTCCE
T ss_pred cCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEeC-CCccE
Confidence 777777754444554 577777777644 55444556777777777777754 44333445555 677777773 44555
Q ss_pred cCCcccCCCCCCCEEEccCccCc----cccCCCccCCCCcccEEEccCCCCCCCCCcccCCCCCCCEEEccCCCCCCCCC
Q 004248 277 SVPSELRGLRSLQKFVIGNNFLS----GNLSVNLFPTVSQLQIIVLRQNGFTGPPPDVLWSMPQLRLLDISRNNFTGPLP 352 (766)
Q Consensus 277 ~~p~~l~~l~~L~~L~ls~N~l~----g~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p 352 (766)
.-+..|.++++|+.+++.+|.+. ..++...|..+++|+.++|. |.++......|.++++|+.++|..| ++ .++
T Consensus 262 I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~-~I~ 338 (401)
T 4fdw_A 262 IASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VT-QIN 338 (401)
T ss_dssp ECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CC-EEC
T ss_pred EChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-cc-EEc
Confidence 55667777777777777776654 13666677777778888777 4466666777777788888888554 44 444
Q ss_pred cccccCCCCCcEEEccCCcCccCCC---cCC-CCCCEEeccCCcC
Q 004248 353 NSRSNVNTSTVELNISQNMFYGGLT---PVL-GRFRLVDLSGNYF 393 (766)
Q Consensus 353 ~~~~~~~~~l~~L~ls~N~l~g~~~---~~l-~~l~~ldLs~N~l 393 (766)
...+..+ +|+.+++++|....-.. ..+ ..++.|.+..|.+
T Consensus 339 ~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~ 382 (401)
T 4fdw_A 339 FSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESV 382 (401)
T ss_dssp TTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGH
T ss_pred HHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHH
Confidence 4445555 77778877775532111 122 2456666655543
No 395
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.46 E-value=3.2e-13 Score=130.66 Aligned_cols=103 Identities=26% Similarity=0.288 Sum_probs=46.9
Q ss_pred EEEeecCcCCCCCCccccCCCCCCEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCCCCCCCccEEEccCCC
Q 004248 170 SLYLSDNGLTGTIPSSLGQLSVLSVLDLSRNSLTGNIPTSFGLLKNLSSLDISSNYLTGSIPPGLGTLSKLQYLNVSNNS 249 (766)
Q Consensus 170 ~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~ 249 (766)
.+++++|+++ .+|..+. ++|++|+|++|++++..|..|.++++|+.|+|++|++++..+..|.++++|++|+|++|+
T Consensus 16 ~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~ 92 (174)
T 2r9u_A 16 LVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNH 92 (174)
T ss_dssp EEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCc
Confidence 3444444443 3333332 344444444444444444444444444445554444443333334444455555555555
Q ss_pred CCCCCccccCCCCCCCEEEccCCcCC
Q 004248 250 LASSIPAQLGDLDSLVDLDLSMNSLS 275 (766)
Q Consensus 250 l~~~~p~~l~~l~~L~~L~Ls~N~l~ 275 (766)
|++..+..|..+++|++|+|++|.+.
T Consensus 93 l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 93 LKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp CCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred cceeCHHHhccccCCCEEEeCCCCcc
Confidence 54433333444555555555555444
No 396
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.45 E-value=4.1e-13 Score=129.95 Aligned_cols=105 Identities=23% Similarity=0.326 Sum_probs=68.2
Q ss_pred CEEEccCCCCCccCCcccCCCCCCcEEEeecCcCCCCCCccccCCCCCCEEEccCCCCCCCCCcccCCCCCCCEEeccCC
Q 004248 145 QALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPSSLGQLSVLSVLDLSRNSLTGNIPTSFGLLKNLSSLDISSN 224 (766)
Q Consensus 145 ~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 224 (766)
+.+++++|.++ .+|..+. ++|++|+|++|++++..|..|.++++|++|+|++|+|++..+..|.++++|+.|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 45666666664 3444443 56666666666666666666666777777777777776654555667777777777777
Q ss_pred cCCCCCCCCCCCCCCccEEEccCCCCCC
Q 004248 225 YLTGSIPPGLGTLSKLQYLNVSNNSLAS 252 (766)
Q Consensus 225 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 252 (766)
++++..+..|..+++|++|+|++|.+..
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c 119 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDC 119 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCT
T ss_pred ccceeCHHHhccccCCCEEEeCCCCccc
Confidence 7775444456777777777777777654
No 397
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.41 E-value=8.1e-12 Score=137.29 Aligned_cols=240 Identities=15% Similarity=0.154 Sum_probs=145.5
Q ss_pred CCCCCEEEccCCCCCccCCcccCCCCCCcEEEeecCcCCCCCCccccCCCCCCEEEccCCCCCCCCCcccCCCCCCCEEe
Q 004248 141 LPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPSSLGQLSVLSVLDLSRNSLTGNIPTSFGLLKNLSSLD 220 (766)
Q Consensus 141 l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 220 (766)
+..++.+.+.+ .++.+-+..|.+. +|+.+.|..| ++..-...|.+ .+|+.+.+.. .++..-+..|.+|++|+.++
T Consensus 112 ~~~l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~-~~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~ 186 (401)
T 4fdw_A 112 LKGYNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFN-STVQEIVFPS-TLEQLKEDIFYYCYNLKKAD 186 (401)
T ss_dssp CSSCSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTT-CCCCEEECCT-TCCEECSSTTTTCTTCCEEE
T ss_pred cCCccEEEECC-ccCEehHhhcccC-CccEEEeCCC-ccEECHHhcCC-CCceEEEeCC-CccEehHHHhhCcccCCeee
Confidence 45566666654 3444455566664 6777777655 55444455655 3577777764 55555556677777777777
Q ss_pred ccCCcCCCCCCCCCCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccCCCCCCCEEEccCccCcc
Q 004248 221 ISSNYLTGSIPPGLGTLSKLQYLNVSNNSLASSIPAQLGDLDSLVDLDLSMNSLSGSVPSELRGLRSLQKFVIGNNFLSG 300 (766)
Q Consensus 221 Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g 300 (766)
|++|.++. +|......++|+.+.|..+ ++..-...|.++++|+.+++..| ++..-...|.+ .+|+.+.+.++ ++
T Consensus 187 l~~n~l~~-I~~~aF~~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~lp~~-i~- 260 (401)
T 4fdw_A 187 LSKTKITK-LPASTFVYAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKLPNG-VT- 260 (401)
T ss_dssp CTTSCCSE-ECTTTTTTCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEEETT-CC-
T ss_pred cCCCcceE-echhhEeecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEeCCC-cc-
Confidence 77777763 3333333577777777633 55444556677777777777654 44444455655 56777777433 33
Q ss_pred ccCCCccCCCCcccEEEccCCCCC-----CCCCcccCCCCCCCEEEccCCCCCCCCCcccccCCCCCcEEEccCCc--Cc
Q 004248 301 NLSVNLFPTVSQLQIIVLRQNGFT-----GPPPDVLWSMPQLRLLDISRNNFTGPLPNSRSNVNTSTVELNISQNM--FY 373 (766)
Q Consensus 301 ~~~~~~~~~l~~L~~L~L~~N~l~-----~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~L~ls~N~--l~ 373 (766)
.++...|..+++|+.+++.+|.+. ...+..|.++++|+.++|.+ +++ .++...+..+.+|+.+++.+|- +.
T Consensus 261 ~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~~-~i~-~I~~~aF~~c~~L~~l~lp~~l~~I~ 338 (401)
T 4fdw_A 261 NIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIPE-SIR-ILGQGLLGGNRKVTQLTIPANVTQIN 338 (401)
T ss_dssp EECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCCT-TCC-EECTTTTTTCCSCCEEEECTTCCEEC
T ss_pred EEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeCC-ceE-EEhhhhhcCCCCccEEEECccccEEc
Confidence 456666777777777777766654 34456677777777777773 354 4555555666677777776551 11
Q ss_pred cCCCcCCCCCCEEeccCCcCc
Q 004248 374 GGLTPVLGRFRLVDLSGNYFE 394 (766)
Q Consensus 374 g~~~~~l~~l~~ldLs~N~l~ 394 (766)
....... +|+.+++++|.+.
T Consensus 339 ~~aF~~~-~L~~l~l~~n~~~ 358 (401)
T 4fdw_A 339 FSAFNNT-GIKEVKVEGTTPP 358 (401)
T ss_dssp TTSSSSS-CCCEEEECCSSCC
T ss_pred HHhCCCC-CCCEEEEcCCCCc
Confidence 2223344 6777777777554
No 398
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.28 E-value=7.3e-12 Score=135.07 Aligned_cols=101 Identities=29% Similarity=0.299 Sum_probs=47.7
Q ss_pred EEccCC-CCCccCCcccCCCCCCcEEEeec-CcCCCCCCccccCCCCCCEEEccCCCCCCCCCcccCCCCCCCEEeccCC
Q 004248 147 LDLRSC-SISGVIPFSLGNLTNLTSLYLSD-NGLTGTIPSSLGQLSVLSVLDLSRNSLTGNIPTSFGLLKNLSSLDISSN 224 (766)
Q Consensus 147 L~Ls~N-~l~g~~p~~l~~l~~L~~L~Ls~-N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 224 (766)
++++++ ++++ +|. +..+++|++|+|++ |+|++..|..|.+|++|++|+|++|+|++..|..|.+|++|+.|+|++|
T Consensus 13 v~~~~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N 90 (347)
T 2ifg_A 13 LRCTRDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFN 90 (347)
T ss_dssp EECCSSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSS
T ss_pred EEcCCCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCC
Confidence 344444 4443 344 55555555555553 5555444444555555555555555555544445555555555555555
Q ss_pred cCCCCCCCCCCCCCCccEEEccCCCC
Q 004248 225 YLTGSIPPGLGTLSKLQYLNVSNNSL 250 (766)
Q Consensus 225 ~l~~~~p~~l~~l~~L~~L~Ls~N~l 250 (766)
+|++..+..+..++ |+.|+|.+|.+
T Consensus 91 ~l~~~~~~~~~~~~-L~~l~l~~N~~ 115 (347)
T 2ifg_A 91 ALESLSWKTVQGLS-LQELVLSGNPL 115 (347)
T ss_dssp CCSCCCSTTTCSCC-CCEEECCSSCC
T ss_pred ccceeCHHHcccCC-ceEEEeeCCCc
Confidence 55433222232222 44444444444
No 399
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.28 E-value=8.4e-12 Score=128.96 Aligned_cols=146 Identities=16% Similarity=0.033 Sum_probs=112.0
Q ss_pred HHHHhCCCCccceeecCCcceEEEEEEcCCcEEEEEEeeccc-cCHHHHHHHHHHHhhcC-CCCcccceeEEEecCCcEE
Q 004248 529 LLAATGDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQS-VKTEAYLLELDFFSKVS-HARLVPLLGHCMERENEKF 606 (766)
Q Consensus 529 l~~~~~~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~-~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~~ 606 (766)
+....+.|......+.|+.+.||++... ++.+++|...... .....+.+|+++++.+. |..+.++++++.. .+..|
T Consensus 9 l~~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~-~~~~~ 86 (263)
T 3tm0_A 9 LKKLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERH-DGWSN 86 (263)
T ss_dssp HHHHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEE-TTEEE
T ss_pred HHHHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEec-CCceE
Confidence 4455677888888898999999999754 6789999986532 22446899999999985 6677788887655 56789
Q ss_pred EEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccC------------------------------
Q 004248 607 LVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHE------------------------------ 656 (766)
Q Consensus 607 lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~------------------------------ 656 (766)
+||||++|.+|.+.+.. ..+...++.+++++|+.||+.
T Consensus 87 lv~e~i~G~~l~~~~~~------------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (263)
T 3tm0_A 87 LLMSEADGVLCSEEYED------------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVD 154 (263)
T ss_dssp EEEECCSSEEHHHHCCT------------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCS
T ss_pred EEEEecCCeehhhccCC------------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccc
Confidence 99999999998876421 112346788999999999971
Q ss_pred --------------------------CCCCeEecCCCCCCeeeCCCCcEEeccchhhh
Q 004248 657 --------------------------CTLPFVHRDVQASSILLDDKFEVRLGSLSEVC 688 (766)
Q Consensus 657 --------------------------~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~ 688 (766)
..+.++|+|++|.||+++++..+.|.||+.+.
T Consensus 155 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 155 CENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp GGGGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred cccccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 01358999999999999876667799999764
No 400
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.27 E-value=3.6e-12 Score=137.52 Aligned_cols=103 Identities=25% Similarity=0.204 Sum_probs=67.3
Q ss_pred EEEeecC-cCCCCCCccccCCCCCCEEEccC-CCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCCCCCCCccEEEccC
Q 004248 170 SLYLSDN-GLTGTIPSSLGQLSVLSVLDLSR-NSLTGNIPTSFGLLKNLSSLDISSNYLTGSIPPGLGTLSKLQYLNVSN 247 (766)
Q Consensus 170 ~L~Ls~N-~l~~~~p~~l~~L~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~ 247 (766)
.++++++ +++ .+|. +..+++|++|+|++ |+|++..|..|.+|++|+.|+|++|+|++..|..|.+|++|++|+|++
T Consensus 12 ~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 4566666 666 3666 77777777777774 777666666677777777777777777766666666677777777777
Q ss_pred CCCCCCCccccCCCCCCCEEEccCCcCC
Q 004248 248 NSLASSIPAQLGDLDSLVDLDLSMNSLS 275 (766)
Q Consensus 248 N~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 275 (766)
|+|++..|..+..++ |+.|+|.+|.+.
T Consensus 90 N~l~~~~~~~~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 90 NALESLSWKTVQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp SCCSCCCSTTTCSCC-CCEEECCSSCCC
T ss_pred CccceeCHHHcccCC-ceEEEeeCCCcc
Confidence 776654444444444 666666666655
No 401
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.20 E-value=9.6e-14 Score=151.19 Aligned_cols=135 Identities=21% Similarity=0.227 Sum_probs=64.9
Q ss_pred CCCCCEEEccCCCCCccCCcccC-----CCCCCcEEEeecCcCCCCCCccc-cCCCCCCEEEccCCCCCCCCCccc----
Q 004248 141 LPTLQALDLRSCSISGVIPFSLG-----NLTNLTSLYLSDNGLTGTIPSSL-GQLSVLSVLDLSRNSLTGNIPTSF---- 210 (766)
Q Consensus 141 l~~L~~L~Ls~N~l~g~~p~~l~-----~l~~L~~L~Ls~N~l~~~~p~~l-~~L~~L~~L~Ls~N~l~~~~p~~~---- 210 (766)
+++|+.|+|++|.++......+. +.++|++|+|++|.++......+ ..+++|+.|+|++|+++......+
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L 150 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLL 150 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHH
T ss_pred HhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHH
Confidence 45666777777766543322222 22566666666666653222222 234456666666666653322222
Q ss_pred -CCCCCCCEEeccCCcCCC----CCCCCCCCCCCccEEEccCCCCCCC----CccccCCCCCCCEEEccCCcCC
Q 004248 211 -GLLKNLSSLDISSNYLTG----SIPPGLGTLSKLQYLNVSNNSLASS----IPAQLGDLDSLVDLDLSMNSLS 275 (766)
Q Consensus 211 -~~l~~L~~L~Ls~N~l~~----~~p~~l~~l~~L~~L~Ls~N~l~~~----~p~~l~~l~~L~~L~Ls~N~l~ 275 (766)
...++|+.|+|++|.++. .++..+..+++|++|+|++|.++.. ++..+...++|++|+|++|.++
T Consensus 151 ~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~ 224 (372)
T 3un9_A 151 LHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAG 224 (372)
T ss_dssp HSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCC
T ss_pred HhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCC
Confidence 234555566666555542 1222233445555555555554321 1233344445555555555554
No 402
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.20 E-value=9.1e-14 Score=151.39 Aligned_cols=167 Identities=22% Similarity=0.192 Sum_probs=122.5
Q ss_pred CCCCCEEecCCCCCCCCCchhhhh----CCCCCCEEEccCCCCCccCCccc-CCCCCCcEEEeecCcCCCCCCccc----
Q 004248 116 LTHLASFNASRFLLPGSIPDWLGQ----QLPTLQALDLRSCSISGVIPFSL-GNLTNLTSLYLSDNGLTGTIPSSL---- 186 (766)
Q Consensus 116 l~~L~~L~ls~n~l~g~ip~~~~~----~l~~L~~L~Ls~N~l~g~~p~~l-~~l~~L~~L~Ls~N~l~~~~p~~l---- 186 (766)
+++|+.|++++|.++..-...+.. ..++|++|||++|.++..-...+ ..+++|++|+|++|.++......+
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L 150 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLL 150 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHH
T ss_pred HhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHH
Confidence 467899999999986543333322 23689999999999975433333 346789999999999975433333
Q ss_pred -cCCCCCCEEEccCCCCCC----CCCcccCCCCCCCEEeccCCcCCCC----CCCCCCCCCCccEEEccCCCCCCC----
Q 004248 187 -GQLSVLSVLDLSRNSLTG----NIPTSFGLLKNLSSLDISSNYLTGS----IPPGLGTLSKLQYLNVSNNSLASS---- 253 (766)
Q Consensus 187 -~~L~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~l~~l~~L~~L~Ls~N~l~~~---- 253 (766)
...++|++|+|++|.++. .++..+..+++|++|+|++|.++.. ++..+...++|++|+|++|.++..
T Consensus 151 ~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~ 230 (372)
T 3un9_A 151 LHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALA 230 (372)
T ss_dssp HSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHH
T ss_pred HhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHH
Confidence 356789999999999864 2445557789999999999998742 345567778999999999999753
Q ss_pred CccccCCCCCCCEEEccCCcCCccCCccc
Q 004248 254 IPAQLGDLDSLVDLDLSMNSLSGSVPSEL 282 (766)
Q Consensus 254 ~p~~l~~l~~L~~L~Ls~N~l~g~~p~~l 282 (766)
++..+...++|++|+|++|.++..-...+
T Consensus 231 l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L 259 (372)
T 3un9_A 231 LARAAREHPSLELLHLYFNELSSEGRQVL 259 (372)
T ss_dssp HHHHHHHCSSCCEEECTTSSCCHHHHHHH
T ss_pred HHHHHHhCCCCCEEeccCCCCCHHHHHHH
Confidence 33445567889999999999876444333
No 403
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.16 E-value=4.4e-11 Score=123.00 Aligned_cols=136 Identities=15% Similarity=0.104 Sum_probs=97.0
Q ss_pred CCCccceeecCCcceEEEEEEcCCcEEEEEEeeccccCHHHHHHHHHHHhhcCCCCc-c-cceeEEEecCCcEEEEEeeC
Q 004248 535 DFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARL-V-PLLGHCMERENEKFLVYKYM 612 (766)
Q Consensus 535 ~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~H~ni-v-~l~~~~~~~~~~~~lV~Ey~ 612 (766)
++....+.+.|..+.||++...+|..+++|..... ....+.+|+++++.+++.++ | +++++... ++..++||||+
T Consensus 21 ~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~--~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~-~~~~~~v~e~i 97 (264)
T 1nd4_A 21 GYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG--ALNELQDEAARLSWLATTGVPCAAVLDVVTE-AGRDWLLLGEV 97 (264)
T ss_dssp TCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC--TTSCHHHHHHHHHHHHTTTCCBCCEEEEEEC-SSCEEEEEECC
T ss_pred CCceEecccCCCCceEEEEecCCCCeEEEEeCCcc--cchhhhHHHHHHHHHHhCCCCCCeEEEeccC-CCCCEEEEEec
Confidence 34433333456679999998777888999987543 23467899999999965554 4 47775543 45689999999
Q ss_pred CCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCC-----------------------------------
Q 004248 613 PNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHEC----------------------------------- 657 (766)
Q Consensus 613 ~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~----------------------------------- 657 (766)
+|.+|. ... .+ ...++.++++.|+.||+..
T Consensus 98 ~G~~l~--~~~----------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (264)
T 1nd4_A 98 PGQDLL--SSH----------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEH 162 (264)
T ss_dssp SSEETT--TSC----------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGG
T ss_pred CCcccC--cCc----------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhc
Confidence 998884 211 11 2256677777777777631
Q ss_pred --------------------CCCeEecCCCCCCeeeCCCCcEEeccchhhh
Q 004248 658 --------------------TLPFVHRDVQASSILLDDKFEVRLGSLSEVC 688 (766)
Q Consensus 658 --------------------~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~ 688 (766)
.+.++|+|++|.||+++++..++|.|||.+.
T Consensus 163 ~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 163 QGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp TTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred cCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 1239999999999999887667899999874
No 404
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=99.03 E-value=5.2e-10 Score=121.18 Aligned_cols=142 Identities=12% Similarity=0.169 Sum_probs=105.4
Q ss_pred ccceeecCCcceEEEEEEcCCcEEEEEEee--cccc--CHHHHHHHHHHHhhcC--CCCcccceeEEEecC--CcEEEEE
Q 004248 538 DANLIKNGHSGDLFRGILEGGIPVVIKRID--LQSV--KTEAYLLELDFFSKVS--HARLVPLLGHCMERE--NEKFLVY 609 (766)
Q Consensus 538 ~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~--~~~~--~~~~~~~E~~~l~~l~--H~niv~l~~~~~~~~--~~~~lV~ 609 (766)
..+.++.|.++.||+....+ ..+++|+.. .... ....+.+|+++++.++ +..+.++++++.+.. +..|+||
T Consensus 42 ~~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vm 120 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIM 120 (359)
T ss_dssp EEEECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEE
T ss_pred eEEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEE
Confidence 46789999999999988665 578888875 3321 2456889999999997 455778887665421 3479999
Q ss_pred eeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCC--------------------------------
Q 004248 610 KYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHEC-------------------------------- 657 (766)
Q Consensus 610 Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~-------------------------------- 657 (766)
||++|..+.+... ..++..++..++.++++.|+.||+..
T Consensus 121 e~v~G~~l~~~~~---------~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (359)
T 3dxp_A 121 EFVSGRVLWDQSL---------PGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSET 191 (359)
T ss_dssp ECCCCBCCCCTTC---------TTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCC
T ss_pred EecCCeecCCCcc---------ccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCC
Confidence 9999877754211 23778889999999999999999721
Q ss_pred -----------------------CCCeEecCCCCCCeeeCCCCc--EEeccchhhhh
Q 004248 658 -----------------------TLPFVHRDVQASSILLDDKFE--VRLGSLSEVCA 689 (766)
Q Consensus 658 -----------------------~~~iiHrDlKp~NILl~~~~~--~kl~DFG~a~~ 689 (766)
.+.++|+|++|.||+++.++. ++|.||+.+..
T Consensus 192 ~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 192 ESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp SCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred cCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 246999999999999997753 68999998864
No 405
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=98.94 E-value=1.1e-08 Score=112.06 Aligned_cols=248 Identities=13% Similarity=0.070 Sum_probs=114.3
Q ss_pred hhccCCCCCEEecCCCCCCCCCchhhhhCCCCCCEEEccCCCCCccCCcccCCCCCCcEEEeecCc--------------
Q 004248 112 ALVNLTHLASFNASRFLLPGSIPDWLGQQLPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNG-------------- 177 (766)
Q Consensus 112 ~l~~l~~L~~L~ls~n~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~-------------- 177 (766)
++.++++|+.+.+..+ + ..|++.-+.++++|+.++|.++ ++..-...|.++++|+.+.+..+-
T Consensus 66 AF~~c~~L~~i~lp~~-i-~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~l~~i~~~aF~~~~~~ 142 (394)
T 4fs7_A 66 AFQGCRKVTEIKIPST-V-REIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLMLKSIGVEAFKGCDFK 142 (394)
T ss_dssp TTTTCTTEEEEECCTT-C-CEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTTCCEECTTTTTTCCCS
T ss_pred HhhCCCCceEEEeCCC-c-cCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCceeeecceeeeccccc
Confidence 4556666666666533 2 2344443444667777777544 443344456666666555544321
Q ss_pred -------CCCCCCccccCCCCCCEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCCCCCCCccEEEccCCCC
Q 004248 178 -------LTGTIPSSLGQLSVLSVLDLSRNSLTGNIPTSFGLLKNLSSLDISSNYLTGSIPPGLGTLSKLQYLNVSNNSL 250 (766)
Q Consensus 178 -------l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l 250 (766)
....-...|.++++|+.+.+..+. ...-...|.++++|+.+++..| ++..-...+.++..|+.+.+..+..
T Consensus 143 ~~~~~~~~~~i~~~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~ 220 (394)
T 4fs7_A 143 EITIPEGVTVIGDEAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLY 220 (394)
T ss_dssp EEECCTTCCEECTTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCC
T ss_pred ccccCccccccchhhhcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCCce
Confidence 000112345556666666665443 2233445666666666666554 2222233445555555554443322
Q ss_pred CCCCccccCCCCCCCEEEccCCcCCccCCcccCCCCCCCEEEccCccCc-------------------cccCCCccCCCC
Q 004248 251 ASSIPAQLGDLDSLVDLDLSMNSLSGSVPSELRGLRSLQKFVIGNNFLS-------------------GNLSVNLFPTVS 311 (766)
Q Consensus 251 ~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~-------------------g~~~~~~~~~l~ 311 (766)
. +........+|+.+.+..+ ++..-...+.++..|+.+.+..+... ..++...|..+.
T Consensus 221 ~--i~~~~~~~~~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~i~~~~F~~~~~l~~~~~~~~~i~~~~F~~~~ 297 (394)
T 4fs7_A 221 Y--LGDFALSKTGVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLRIGGSLFYNCSGLKKVIYGSVIVPEKTFYGCS 297 (394)
T ss_dssp E--ECTTTTTTCCCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCEECSCTTTTCTTCCEEEECSSEECTTTTTTCT
T ss_pred E--eehhhcccCCCceEEECCC-ceecccccccccccceeEEcCCCcceeeccccccccccceeccCceeeccccccccc
Confidence 1 1111222234444444322 11122233444445555554443321 012333445555
Q ss_pred cccEEEccCCCCCCCCCcccCCCCCCCEEEccCCCCCCCCCcccccCCCCCcEEEccCC
Q 004248 312 QLQIIVLRQNGFTGPPPDVLWSMPQLRLLDISRNNFTGPLPNSRSNVNTSTVELNISQN 370 (766)
Q Consensus 312 ~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~L~ls~N 370 (766)
+|+.+.+..+ ++.....+|.++.+|+.++|.++ ++ .|+...+..+.+|+.+++..|
T Consensus 298 ~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~-~I~~~aF~~c~~L~~i~lp~~ 353 (394)
T 4fs7_A 298 SLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VE-EIGKRSFRGCTSLSNINFPLS 353 (394)
T ss_dssp TCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CC-EECTTTTTTCTTCCEECCCTT
T ss_pred cccccccccc-cceechhhhcCCCCCCEEEeCCc-cc-EEhHHhccCCCCCCEEEECcc
Confidence 5555555433 44444445555556666655432 33 344344444455555555443
No 406
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.84 E-value=6.2e-10 Score=120.17 Aligned_cols=135 Identities=17% Similarity=0.223 Sum_probs=60.4
Q ss_pred cCCCCCCcEEEeecCcCCCCCCccccCCCCCCEEEccCCCCCCCCCcccC--CCCCCCEEeccC--CcCCCC-----CCC
Q 004248 162 LGNLTNLTSLYLSDNGLTGTIPSSLGQLSVLSVLDLSRNSLTGNIPTSFG--LLKNLSSLDISS--NYLTGS-----IPP 232 (766)
Q Consensus 162 l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~Ls~--N~l~~~-----~p~ 232 (766)
+..+++|+.|+|++|.-. .++. +. +++|+.|+|..|.++......+. .+++|+.|+|+. |...+. +..
T Consensus 168 l~~~P~L~~L~L~g~~~l-~l~~-~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~ 244 (362)
T 2ra8_A 168 LDAMPLLNNLKIKGTNNL-SIGK-KP-RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRP 244 (362)
T ss_dssp HHTCTTCCEEEEECCBTC-BCCS-CB-CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGG
T ss_pred HhcCCCCcEEEEeCCCCc-eecc-cc-CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHH
Confidence 344555555555554211 1222 22 55566666655554322212222 456666666542 111111 000
Q ss_pred CC--CCCCCccEEEccCCCCCCCCcccc---CCCCCCCEEEccCCcCCcc----CCcccCCCCCCCEEEccCccCc
Q 004248 233 GL--GTLSKLQYLNVSNNSLASSIPAQL---GDLDSLVDLDLSMNSLSGS----VPSELRGLRSLQKFVIGNNFLS 299 (766)
Q Consensus 233 ~l--~~l~~L~~L~Ls~N~l~~~~p~~l---~~l~~L~~L~Ls~N~l~g~----~p~~l~~l~~L~~L~ls~N~l~ 299 (766)
.+ ..+++|++|+|++|.+....+..+ ..+++|++|+|+.|.+.+. ++..+.++++|+.|++++|.++
T Consensus 245 ~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~ 320 (362)
T 2ra8_A 245 LFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLS 320 (362)
T ss_dssp GSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCC
T ss_pred HHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCC
Confidence 11 235566666666666543222211 2345666666666666542 2222334455555555555543
No 407
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.83 E-value=9.5e-10 Score=116.19 Aligned_cols=193 Identities=11% Similarity=0.018 Sum_probs=119.0
Q ss_pred cceeecCCcceEEEEEEcCCcEEEEEEeeccccCHHHHHHHHHHHhhcC-CCCc--ccceeEEEecC--CcEEEEEeeCC
Q 004248 539 ANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVS-HARL--VPLLGHCMERE--NEKFLVYKYMP 613 (766)
Q Consensus 539 ~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~-H~ni--v~l~~~~~~~~--~~~~lV~Ey~~ 613 (766)
.+.++.|....||+.. ..+++|.-... .....+.+|.++|+.+. +..+ .+.+......+ ...|+||||++
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~-~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~ 99 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS-RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIK 99 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH-HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc-chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccC
Confidence 4678999999999853 56889986432 22467899999999884 3332 23333221111 13489999999
Q ss_pred CCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccC-------------------------------------
Q 004248 614 NGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHE------------------------------------- 656 (766)
Q Consensus 614 ~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~------------------------------------- 656 (766)
|.+|.+.... .++..++..++.++++.++.||+.
T Consensus 100 G~~l~~~~~~---------~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (304)
T 3sg8_A 100 GVPLTPLLLN---------NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQM 170 (304)
T ss_dssp CEECCHHHHH---------TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHH
T ss_pred CeECCccccc---------cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccH
Confidence 9888653321 266677777777888777777751
Q ss_pred ------------------CCCCeEecCCCCCCeeeCC--CCcEEeccchhhhhcCCCCccceeeecc---cCCCCCCC--
Q 004248 657 ------------------CTLPFVHRDVQASSILLDD--KFEVRLGSLSEVCAQGGDAHQSRITRLL---RLPQSSEQ-- 711 (766)
Q Consensus 657 ------------------~~~~iiHrDlKp~NILl~~--~~~~kl~DFG~a~~~~~~~~~~~~t~~y---~aPe~~~~-- 711 (766)
..+.++|+|++|.||++++ ...+.|.||+.+..-+. .........+ ..|+....
T Consensus 171 ~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~-~~Dl~~~~~~~~~~~~~~~~~~l 249 (304)
T 3sg8_A 171 KKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDP-DNDFISLMEDDEEYGMEFVSKIL 249 (304)
T ss_dssp HHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECT-THHHHTTCCTTTSCCHHHHHHHH
T ss_pred HHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCCh-HHHHHHHHhhccccCHHHHHHHH
Confidence 1245899999999999998 45688999998764321 1000000000 01110000
Q ss_pred Cceee---eeeeeecccccceecchHHHHHHhcCCCCC
Q 004248 712 GSSGM---VIYLFIIFTIFHIYFHGNPLFSAIFNNHLN 746 (766)
Q Consensus 712 ~~~g~---~~~~~~~~~~~Dv~s~Gvvl~elltG~~p~ 746 (766)
..||. ..+..+.....+.|++|++++++.+|+.||
T Consensus 250 ~~Y~~~~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 250 NHYKHKDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp HHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHH
Confidence 00111 000111233358899999999999999887
No 408
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.79 E-value=1.1e-09 Score=118.31 Aligned_cols=190 Identities=15% Similarity=0.194 Sum_probs=82.8
Q ss_pred CCCCCEEEccCCCCCc-cC-------CcccCCCCCCcEEEeecCcCCCCCCccccCCCCCCEEEccCCCCCCCCCcccCC
Q 004248 141 LPTLQALDLRSCSISG-VI-------PFSLGNLTNLTSLYLSDNGLTGTIPSSLGQLSVLSVLDLSRNSLTGNIPTSFGL 212 (766)
Q Consensus 141 l~~L~~L~Ls~N~l~g-~~-------p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~ 212 (766)
...++.|.+....+.| .. ..++..+++|+.|.+.++..... +++... .+.++..+..
T Consensus 106 ~~~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~~~e~~--------------~is~~~-~~~L~~ll~~ 170 (362)
T 2ra8_A 106 LPSLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDIDFEEQ--------------EISWIE-QVDLSPVLDA 170 (362)
T ss_dssp GGGCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCCCTTTC--------------CGGGCB-CCBCHHHHHT
T ss_pred chhcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCcchhhc--------------cccccc-ccCHHHHHhc
Confidence 4457788887666543 11 22345667888887765432100 000000 0112222333
Q ss_pred CCCCCEEeccCCcCCCCCCCCCCCCCCccEEEccCCCCCCCCccccC--CCCCCCEEEccC--CcCCcc-----CCccc-
Q 004248 213 LKNLSSLDISSNYLTGSIPPGLGTLSKLQYLNVSNNSLASSIPAQLG--DLDSLVDLDLSM--NSLSGS-----VPSEL- 282 (766)
Q Consensus 213 l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~--~l~~L~~L~Ls~--N~l~g~-----~p~~l- 282 (766)
+++|+.|+|++|.-. .++. + .+++|+.|+|..|.++......+. .+++|++|+|+. |...+. +...+
T Consensus 171 ~P~L~~L~L~g~~~l-~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~ 247 (362)
T 2ra8_A 171 MPLLNNLKIKGTNNL-SIGK-K-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFS 247 (362)
T ss_dssp CTTCCEEEEECCBTC-BCCS-C-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSC
T ss_pred CCCCcEEEEeCCCCc-eecc-c-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHh
Confidence 444444444444200 1222 2 245555555555544322111222 455555555532 111111 00111
Q ss_pred -CCCCCCCEEEccCccCccccCCCcc--CCCCcccEEEccCCCCCCC----CCcccCCCCCCCEEEccCCCCC
Q 004248 283 -RGLRSLQKFVIGNNFLSGNLSVNLF--PTVSQLQIIVLRQNGFTGP----PPDVLWSMPQLRLLDISRNNFT 348 (766)
Q Consensus 283 -~~l~~L~~L~ls~N~l~g~~~~~~~--~~l~~L~~L~L~~N~l~~~----~p~~l~~l~~L~~L~Ls~N~l~ 348 (766)
..+++|++|+|.+|.+.+.....++ +.+++|+.|+|+.|.++.. ++..+..+++|+.|+|++|.++
T Consensus 248 ~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~ 320 (362)
T 2ra8_A 248 KDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLS 320 (362)
T ss_dssp TTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCC
T ss_pred cCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCC
Confidence 2355666666666655432211111 2345566666666665542 2222234566666666666554
No 409
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=98.73 E-value=1.2e-07 Score=103.92 Aligned_cols=246 Identities=12% Similarity=0.054 Sum_probs=152.5
Q ss_pred hhhccCCCCCEEecCCCCCCCCCchhhhhCCCCCCEEEccCC---------------------CCCccCCcccCCCCCCc
Q 004248 111 DALVNLTHLASFNASRFLLPGSIPDWLGQQLPTLQALDLRSC---------------------SISGVIPFSLGNLTNLT 169 (766)
Q Consensus 111 ~~l~~l~~L~~L~ls~n~l~g~ip~~~~~~l~~L~~L~Ls~N---------------------~l~g~~p~~l~~l~~L~ 169 (766)
.++.++++|+.+++..+ + -.|+...+..+++|+.+.+..+ .....-...|.++++|+
T Consensus 88 ~aF~~c~~L~~i~lp~~-l-~~I~~~aF~~c~~L~~i~~p~~l~~i~~~aF~~~~~~~~~~~~~~~~i~~~aF~~c~~L~ 165 (394)
T 4fs7_A 88 FAFENCSKLEIINIPDS-V-KMIGRCTFSGCYALKSILLPLMLKSIGVEAFKGCDFKEITIPEGVTVIGDEAFATCESLE 165 (394)
T ss_dssp TTTTTCTTCCEECCCTT-C-CEECTTTTTTCTTCCCCCCCTTCCEECTTTTTTCCCSEEECCTTCCEECTTTTTTCTTCC
T ss_pred hHhhCCCCCcEEEeCCC-c-eEccchhhcccccchhhcccCceeeecceeeecccccccccCccccccchhhhcccCCCc
Confidence 46778888888888654 2 2344433344555555554332 11112234577888899
Q ss_pred EEEeecCcCCCCCCccccCCCCCCEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCC---------------------C
Q 004248 170 SLYLSDNGLTGTIPSSLGQLSVLSVLDLSRNSLTGNIPTSFGLLKNLSSLDISSNYLT---------------------G 228 (766)
Q Consensus 170 ~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~---------------------~ 228 (766)
.+.+.++. ...-...|.++.+|+.+++..| ++..-...|.++..|+.+.+..+... .
T Consensus 166 ~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~i~~~~~~~~~l~~i~ip~~~~~ 243 (394)
T 4fs7_A 166 YVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLYYLGDFALSKTGVKNIIIPDSFTE 243 (394)
T ss_dssp EEECCTTC-CEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCEECTTTTTTCCCCEEEECTTCCE
T ss_pred EEecCCcc-ceeccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCCceEeehhhcccCCCceEEECCCcee
Confidence 99887654 3244566788888888888766 44444556777777777766554321 0
Q ss_pred CCCCCCCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCcCCccCCcccCCCCCCCEEEccCccCccccCCCccC
Q 004248 229 SIPPGLGTLSKLQYLNVSNNSLASSIPAQLGDLDSLVDLDLSMNSLSGSVPSELRGLRSLQKFVIGNNFLSGNLSVNLFP 308 (766)
Q Consensus 229 ~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~~~~~~~~ 308 (766)
.-...+..+.+|+.+.+..+... .....|.++..|+.+....+.+ ....|..+.+|+.+.+.++ ++ .++...|.
T Consensus 244 i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i---~~~~F~~~~~L~~i~l~~~-i~-~I~~~aF~ 317 (394)
T 4fs7_A 244 LGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIV---PEKTFYGCSSLTEVKLLDS-VK-FIGEEAFE 317 (394)
T ss_dssp ECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEE---CTTTTTTCTTCCEEEECTT-CC-EECTTTTT
T ss_pred cccccccccccceeEEcCCCcce-eeccccccccccceeccCceee---ccccccccccccccccccc-cc-eechhhhc
Confidence 01122334445555555444321 2233445555555555544432 2245778888999988765 33 57777889
Q ss_pred CCCcccEEEccCCCCCCCCCcccCCCCCCCEEEccCCCCCCCCCcccccCCCCCcEEEccC
Q 004248 309 TVSQLQIIVLRQNGFTGPPPDVLWSMPQLRLLDISRNNFTGPLPNSRSNVNTSTVELNISQ 369 (766)
Q Consensus 309 ~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~l~~L~ls~ 369 (766)
++.+|+.++|.++ ++.....+|.++.+|+.+++..| ++ .++...+..+.+|+.+++..
T Consensus 318 ~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~-~I~~~aF~~C~~L~~i~lp~ 375 (394)
T 4fs7_A 318 SCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LR-KIGANAFQGCINLKKVELPK 375 (394)
T ss_dssp TCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CC-EECTTTBTTCTTCCEEEEEG
T ss_pred CCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-cc-EehHHHhhCCCCCCEEEECC
Confidence 9999999999754 77777788999999999999876 54 45555555566666666544
No 410
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=98.73 E-value=2.5e-07 Score=101.36 Aligned_cols=107 Identities=14% Similarity=0.165 Sum_probs=56.8
Q ss_pred ccCCCCCCCEEEccCccCccccCCCccCCCCcccEEEccCCCCCCCCCcccCCCCCCCEEEccCCCCCCCCCcccccCCC
Q 004248 281 ELRGLRSLQKFVIGNNFLSGNLSVNLFPTVSQLQIIVLRQNGFTGPPPDVLWSMPQLRLLDISRNNFTGPLPNSRSNVNT 360 (766)
Q Consensus 281 ~l~~l~~L~~L~ls~N~l~g~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~ 360 (766)
.|.++.+|+.+.+.++.. .+....|.+++.|+.+.+. +.++......|.++.+|+.++|..+ ++ .|....+..+.
T Consensus 260 aF~~c~~L~~i~lp~~~~--~I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~-~I~~~aF~~C~ 334 (394)
T 4gt6_A 260 AFDSCAYLASVKMPDSVV--SIGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-IT-QILDDAFAGCE 334 (394)
T ss_dssp TTTTCSSCCEEECCTTCC--EECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCT
T ss_pred eeeecccccEEecccccc--eecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-cc-EehHhHhhCCC
Confidence 455566666666655433 2444555566666666664 3444445555666666666666543 33 34444445556
Q ss_pred CCcEEEccCCc--CccCCCcCCCCCCEEeccCCc
Q 004248 361 STVELNISQNM--FYGGLTPVLGRFRLVDLSGNY 392 (766)
Q Consensus 361 ~l~~L~ls~N~--l~g~~~~~l~~l~~ldLs~N~ 392 (766)
+|+.+.+..+- +....+....+|+.+++.+|.
T Consensus 335 ~L~~i~ip~sv~~I~~~aF~~C~~L~~i~~~~~~ 368 (394)
T 4gt6_A 335 QLERIAIPSSVTKIPESAFSNCTALNNIEYSGSR 368 (394)
T ss_dssp TCCEEEECTTCCBCCGGGGTTCTTCCEEEESSCH
T ss_pred CCCEEEECcccCEEhHhHhhCCCCCCEEEECCce
Confidence 66666665431 111222345566666666554
No 411
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.68 E-value=7.6e-11 Score=121.10 Aligned_cols=15 Identities=13% Similarity=-0.141 Sum_probs=10.3
Q ss_pred CccceeecCC--CEEEE
Q 004248 77 VWNGVRCQNG--SVVGI 91 (766)
Q Consensus 77 ~W~gv~C~~~--~v~~l 91 (766)
.|.|+.|+.+ +|+.+
T Consensus 79 ~~~g~i~~~~~~ki~~~ 95 (267)
T 3rw6_A 79 AVNYKILDRENRRISII 95 (267)
T ss_dssp HTTSSCBCTTSCBCCCE
T ss_pred hcCcEEECCCCCEEEEE
Confidence 7999999732 55443
No 412
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.59 E-value=1.4e-07 Score=100.24 Aligned_cols=136 Identities=17% Similarity=0.236 Sum_probs=97.9
Q ss_pred CCCccceeecCCcceEEEEEEcCCcEEEEEEeeccccCHHHHHHHHHHHhhcCC---CC-cccceeEEEecCCcEEEEEe
Q 004248 535 DFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSH---AR-LVPLLGHCMERENEKFLVYK 610 (766)
Q Consensus 535 ~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~H---~n-iv~l~~~~~~~~~~~~lV~E 610 (766)
.....+.++.|....||+. |..+++|...... ....+.+|.++++.+.+ +- +.+++++ +..|+|||
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~~-~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~-----~~~~lvme 107 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKRDS-VRISQKRELELYRFLENCKLSYQIPAVVYQ-----SDRFNIMK 107 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESSHH-HHHHHHHHHHHHHHHTTSCCSSBCCCEEEE-----CSSCEEEE
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCcHH-HHHHHHHHHHHHHHHHhcCCCCCcceEEec-----CCcEEEEe
Confidence 5667889999999999997 6778888764322 24568999999999876 22 2333332 35689999
Q ss_pred eCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCC---------------------------------
Q 004248 611 YMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHEC--------------------------------- 657 (766)
Q Consensus 611 y~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~--------------------------------- 657 (766)
|++|.++.+... ..++..++..++.++++.++.||+..
T Consensus 108 ~i~G~~l~~~~~---------~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (320)
T 3r70_A 108 YIKGERITYEQY---------HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKE 178 (320)
T ss_dssp CCCCBCCCHHHH---------TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHT
T ss_pred ecCCcccccccc---------ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhc
Confidence 999988864321 12556666667777777777777421
Q ss_pred ---------------------------CCCeEecCCCCCCeeeCCCCcEEeccchhhhh
Q 004248 658 ---------------------------TLPFVHRDVQASSILLDDKFEVRLGSLSEVCA 689 (766)
Q Consensus 658 ---------------------------~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~ 689 (766)
.+.++|+|++|.||+++.+..+.|.||+.+..
T Consensus 179 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~ 237 (320)
T 3r70_A 179 QLLTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNV 237 (320)
T ss_dssp TCCCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEE
T ss_pred ccccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCccccc
Confidence 13459999999999999866679999998754
No 413
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=98.58 E-value=1.9e-06 Score=94.22 Aligned_cols=261 Identities=13% Similarity=0.135 Sum_probs=112.2
Q ss_pred CCCEEecCCCCCCCCCchhhhhCCCCCCEEEccCCC---CCccCCcccCCCCCCcEEEeecCcCCCCCCccccCCCCCCE
Q 004248 118 HLASFNASRFLLPGSIPDWLGQQLPTLQALDLRSCS---ISGVIPFSLGNLTNLTSLYLSDNGLTGTIPSSLGQLSVLSV 194 (766)
Q Consensus 118 ~L~~L~ls~n~l~g~ip~~~~~~l~~L~~L~Ls~N~---l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~ 194 (766)
.|+.+.+..+ + -.|.+.-+.++++|+.+.++.|. ++..-..+|.++.+|+.+.+..+ ++..-...|.++.+|+.
T Consensus 65 ~L~sI~iP~s-v-t~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~~c~~L~~ 141 (394)
T 4gt6_A 65 VLTSVQIPDT-V-TEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAFHHCEELDT 141 (394)
T ss_dssp CCCEEEECTT-C-CEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTTTTCTTCCE
T ss_pred cCEEEEECCC-e-eEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhhhhhccccc
Confidence 3555555432 1 12333333346666666665543 43333445566666665555433 33233344556666666
Q ss_pred EEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCCCCCCCccEEEccCCCCCCCCccccCCCCCCCEEEccCCcC
Q 004248 195 LDLSRNSLTGNIPTSFGLLKNLSSLDISSNYLTGSIPPGLGTLSKLQYLNVSNNSLASSIPAQLGDLDSLVDLDLSMNSL 274 (766)
Q Consensus 195 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l 274 (766)
+.+..+ +...-...|..+.+|+.+.+..+ ++ .+........+|+.+.+..+-. ..-...+.++.+|+......+..
T Consensus 142 i~lp~~-~~~I~~~~F~~c~~L~~i~~~~~-~~-~I~~~aF~~~~l~~i~ip~~~~-~i~~~af~~c~~l~~~~~~~~~~ 217 (394)
T 4gt6_A 142 VTIPEG-VTSVADGMFSYCYSLHTVTLPDS-VT-AIEERAFTGTALTQIHIPAKVT-RIGTNAFSECFALSTITSDSESY 217 (394)
T ss_dssp EECCTT-CCEECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCCCSEEEECTTCC-EECTTTTTTCTTCCEEEECCSSS
T ss_pred ccccce-eeeecccceecccccccccccce-ee-EeccccccccceeEEEECCccc-ccccchhhhccccceeccccccc
Confidence 666433 22233345555666666665543 22 1111111223455555433221 11222344444444444333322
Q ss_pred CccCCc-------------ccCCCCCCCEEEccCccCccccCCCccCCCCcccEEEccCCCCCCCCCcccCCCCCCCEEE
Q 004248 275 SGSVPS-------------ELRGLRSLQKFVIGNNFLSGNLSVNLFPTVSQLQIIVLRQNGFTGPPPDVLWSMPQLRLLD 341 (766)
Q Consensus 275 ~g~~p~-------------~l~~l~~L~~L~ls~N~l~g~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ 341 (766)
...--. .+.....+..+.+.++ +. .+....|..+..|+.+.+.++. .......|.++++|+.++
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~-v~-~i~~~aF~~c~~L~~i~lp~~~-~~I~~~aF~~c~~L~~i~ 294 (394)
T 4gt6_A 218 PAIDNVLYEKSANGDYALIRYPSQREDPAFKIPNG-VA-RIETHAFDSCAYLASVKMPDSV-VSIGTGAFMNCPALQDIE 294 (394)
T ss_dssp CBSSSCEEEECTTSCEEEEECCTTCCCSEEECCTT-EE-EECTTTTTTCSSCCEEECCTTC-CEECTTTTTTCTTCCEEE
T ss_pred ccccceeecccccccccccccccccccceEEcCCc-ce-EcccceeeecccccEEeccccc-ceecCccccccccccccc
Confidence 110000 0011112222222111 10 1233345555666666654332 223344555666666666
Q ss_pred ccCCCCCCCCCcccccCCCCCcEEEccCCc--CccCCCcCCCCCCEEeccC
Q 004248 342 ISRNNFTGPLPNSRSNVNTSTVELNISQNM--FYGGLTPVLGRFRLVDLSG 390 (766)
Q Consensus 342 Ls~N~l~g~~p~~~~~~~~~l~~L~ls~N~--l~g~~~~~l~~l~~ldLs~ 390 (766)
+. +.++ .++...+..+.+|+.+++..+- +....+....+|+.+.+..
T Consensus 295 l~-~~i~-~I~~~aF~~c~~L~~i~lp~~v~~I~~~aF~~C~~L~~i~ip~ 343 (394)
T 4gt6_A 295 FS-SRIT-ELPESVFAGCISLKSIDIPEGITQILDDAFAGCEQLERIAIPS 343 (394)
T ss_dssp CC-TTCC-EECTTTTTTCTTCCEEECCTTCCEECTTTTTTCTTCCEEEECT
T ss_pred CC-Cccc-ccCceeecCCCCcCEEEeCCcccEehHhHhhCCCCCCEEEECc
Confidence 64 2333 3444455555566666665441 1112223345566665543
No 414
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.49 E-value=6.1e-07 Score=94.62 Aligned_cols=137 Identities=11% Similarity=0.073 Sum_probs=90.6
Q ss_pred cceeecCCcceEEEEEEcCCcEEEEEEeeccccCHHHHHHHHHHHhhcCCC---CcccceeEEEecCCcEEEEEeeCCCC
Q 004248 539 ANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHA---RLVPLLGHCMERENEKFLVYKYMPNG 615 (766)
Q Consensus 539 ~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~H~---niv~l~~~~~~~~~~~~lV~Ey~~~G 615 (766)
.+.++.|....||+. |..+++|.-. .......+.+|.++|+.+++. .+.+.+.++....+..++||||++|.
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~-~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~ 98 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPK-SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQ 98 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEES-SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSE
T ss_pred eeecCCCcceeEEEE----CCEEEEEecC-CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCe
Confidence 467888988899987 5678888742 222246789999999999753 24455555543345679999999998
Q ss_pred ChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccC---------------------------------------
Q 004248 616 DLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHE--------------------------------------- 656 (766)
Q Consensus 616 sL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~--------------------------------------- 656 (766)
.+.+.... .++..++..++.++++.|+.||+.
T Consensus 99 ~l~~~~~~---------~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~ 169 (306)
T 3tdw_A 99 ILGEDGMA---------VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLR 169 (306)
T ss_dssp ECHHHHHT---------TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHH
T ss_pred ECchhhhh---------hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhH
Confidence 77653211 123333333444444444433321
Q ss_pred ------------------CCCCeEecCCCCCCeeeCC---CCc-EEeccchhhhh
Q 004248 657 ------------------CTLPFVHRDVQASSILLDD---KFE-VRLGSLSEVCA 689 (766)
Q Consensus 657 ------------------~~~~iiHrDlKp~NILl~~---~~~-~kl~DFG~a~~ 689 (766)
..+.++|+|++|.||+++. ++. +.|.||+.+..
T Consensus 170 ~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 170 DYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 2346799999999999997 455 48999998754
No 415
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.46 E-value=1.1e-06 Score=91.75 Aligned_cols=145 Identities=11% Similarity=0.103 Sum_probs=94.2
Q ss_pred CccceeecCCcceEEEEEEcCCcEEEEEEeecccc-CHHHHHHHHHHHhhcCCC---CcccceeEEEecCCcEEEEEeeC
Q 004248 537 SDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSV-KTEAYLLELDFFSKVSHA---RLVPLLGHCMERENEKFLVYKYM 612 (766)
Q Consensus 537 ~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~-~~~~~~~E~~~l~~l~H~---niv~l~~~~~~~~~~~~lV~Ey~ 612 (766)
...+.|+.|.++.||++...+|+.++||+...... ....|.+|++.|+.++|. .+.+++++. ..++||||+
T Consensus 18 ~~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~-----~~~lvme~l 92 (288)
T 3d1u_A 18 AAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD-----DRTLAMEWV 92 (288)
T ss_dssp EEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE-----TTEEEEECC
T ss_pred cceeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec-----CcEEEEEec
Confidence 44678999999999999988999999999654322 246799999999999875 466666532 359999999
Q ss_pred CCCChhh-----------hhhccCCC----CC-c---------CCCCCHHHHH-----------------------HHHH
Q 004248 613 PNGDLSS-----------SLYRKTNT----ED-D---------LQSLDWITRL-----------------------KIAI 644 (766)
Q Consensus 613 ~~GsL~~-----------~l~~~~~~----~~-~---------~~~l~~~~~~-----------------------~i~~ 644 (766)
+++++.. .||..... .. . .-.-+|.+.. ....
T Consensus 93 ~g~~~~~~~~~~lg~~LA~LH~~~~~~fG~~~~~~~G~~~q~~~w~~~W~~f~~~~rl~~~l~~a~~~~~~~~~~~~~~~ 172 (288)
T 3d1u_A 93 DERPPTPEAAERFGHQLAAMHLAGAESFGATWDGYIGPLPMDNTPRSTWPEFYAEQRILPYLRRAADRGALTPGDVRLVE 172 (288)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHTCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHHTHHHHHHHHHTTSSCHHHHHHHH
T ss_pred ccCCCChHHHHHHHHHHHHHHcCCCCccCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHH
Confidence 9987531 23432110 00 0 0012454321 1111
Q ss_pred HHHHHhh-hhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhh
Q 004248 645 GAAEGLS-YLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVC 688 (766)
Q Consensus 645 ~ia~gL~-yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~ 688 (766)
.++..+. .+-....+.++|+|+.+.||+++. +.+.|.|| .+.
T Consensus 173 ~l~~~l~~~l~~~~~~~l~HgD~~~~N~l~~~-~~~~~iD~-~~~ 215 (288)
T 3d1u_A 173 KVLDALDHLAGDPEPPARIHGDLWNGNVLWQD-DGAVVIDP-AAH 215 (288)
T ss_dssp HHHHTHHHHTCSCCCCEEECSCCSGGGEEEET-TEEEECSC-CCE
T ss_pred HHHHHHHHHhcCCCCCcceECCCCcCcEEEeC-CCeEEEcC-CcC
Confidence 1222222 111233578999999999999998 45889999 553
No 416
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.38 E-value=3.3e-08 Score=101.37 Aligned_cols=66 Identities=30% Similarity=0.399 Sum_probs=28.7
Q ss_pred CCCCCcEEEeecCcCCC--CCCccccCCCCCCEEEccCCCCCCCCCcccCCCC--CCCEEeccCCcCCCCCC
Q 004248 164 NLTNLTSLYLSDNGLTG--TIPSSLGQLSVLSVLDLSRNSLTGNIPTSFGLLK--NLSSLDISSNYLTGSIP 231 (766)
Q Consensus 164 ~l~~L~~L~Ls~N~l~~--~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~--~L~~L~Ls~N~l~~~~p 231 (766)
++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..++ +|+.|+|++|.+.+.+|
T Consensus 168 ~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~ 237 (267)
T 3rw6_A 168 NIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFR 237 (267)
T ss_dssp HCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCS
T ss_pred hCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccC
Confidence 34444444444444443 2233344444444444444444432 1222222 45555555555544333
No 417
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.30 E-value=2.8e-06 Score=87.58 Aligned_cols=135 Identities=14% Similarity=0.056 Sum_probs=91.7
Q ss_pred ceeecCCcc-eEEEEEE-cCCcEEEEEEeeccccCHHHHHHHHHHHhhcC-CCCcccceeEEEecCCcEEEEEeeCCCCC
Q 004248 540 NLIKNGHSG-DLFRGIL-EGGIPVVIKRIDLQSVKTEAYLLELDFFSKVS-HARLVPLLGHCMERENEKFLVYKYMPNGD 616 (766)
Q Consensus 540 ~~ig~G~~g-~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~~lV~Ey~~~Gs 616 (766)
+.+..|..| .||+... .++..+++|+-... ....+.+|.++|+.+. +--+-++++++.+ ++..|+|||+++|.+
T Consensus 30 ~~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~--~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~-~~~~~lvme~l~G~~ 106 (272)
T 4gkh_A 30 ARDNVGQSGATIYRLYGKPNAPELFLKHGKGS--VANDVTDEMVRLNWLTAFMPLPTIKHFIRT-PDDAWLLTTAIPGKT 106 (272)
T ss_dssp EEEECSSSSCEEEEEECCTTCCCEEEEEEETH--HHHHHHHHHHHHHHHTTTSCCCCEEEEEEE-TTEEEEEEECCCSEE
T ss_pred EEccCCCcCCeEEEEEecCCCeEEEEEECCCC--CHhHHHHHHHHHHHhccCCCcCeEEEEEEE-CCeEEEEEEeeCCcc
Confidence 455666665 6998874 45678999986533 2456889999999885 2235567776655 567899999999987
Q ss_pred hhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccC----------------------------------------
Q 004248 617 LSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHE---------------------------------------- 656 (766)
Q Consensus 617 L~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~---------------------------------------- 656 (766)
+.+..... ...+..++.++++.|+-||..
T Consensus 107 ~~~~~~~~-----------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (272)
T 4gkh_A 107 AFQVLEEY-----------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWP 175 (272)
T ss_dssp HHHHHHHC-----------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCC
T ss_pred ccccccCC-----------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchH
Confidence 76654321 112233445555555555531
Q ss_pred ---------------CCCCeEecCCCCCCeeeCCCCcEEeccchhhh
Q 004248 657 ---------------CTLPFVHRDVQASSILLDDKFEVRLGSLSEVC 688 (766)
Q Consensus 657 ---------------~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~ 688 (766)
..+.++|+|+.+.||++++++.+-|.||+.+.
T Consensus 176 ~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~ 222 (272)
T 4gkh_A 176 VEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG 222 (272)
T ss_dssp HHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence 11237899999999999987777899999875
No 418
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.29 E-value=2.4e-06 Score=92.29 Aligned_cols=148 Identities=14% Similarity=0.099 Sum_probs=91.8
Q ss_pred CCCccceeecCCcceEEEEEEcCCcEEEEEEeeccccCHHHHHHHHHHHhhcCCCC--cccceeEEEecCCcEEEEEeeC
Q 004248 535 DFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHAR--LVPLLGHCMERENEKFLVYKYM 612 (766)
Q Consensus 535 ~~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~H~n--iv~l~~~~~~~~~~~~lV~Ey~ 612 (766)
.....+.++.|....+|+... +|..+++|.-... ..+.+|..+++.+.... +.++++++....+..|+||||+
T Consensus 42 ~~~~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l 116 (362)
T 3ovc_A 42 SVSDLMQLSEGEESRAFSFDV-GGRGYVLRVNSCA----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRA 116 (362)
T ss_dssp CCEEEEEEEECSSEEEEEEEE-TTEEEEEEEESCC----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECC
T ss_pred CCceEEECCCCCcceEEEEEE-CCcEEEEEeCCch----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEec
Confidence 344567789999999999875 5778999976432 36889999999987544 3456665554335689999999
Q ss_pred CCCChhhh------------------hhccCCCC----------Cc---------------CCCCCHHHH---------H
Q 004248 613 PNGDLSSS------------------LYRKTNTE----------DD---------------LQSLDWITR---------L 640 (766)
Q Consensus 613 ~~GsL~~~------------------l~~~~~~~----------~~---------------~~~l~~~~~---------~ 640 (766)
+|.++.+. ||...... .. ...-.|... .
T Consensus 117 ~G~~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 196 (362)
T 3ovc_A 117 QGVTLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVSASVA 196 (362)
T ss_dssp CSEETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTHHHHH
T ss_pred CCCCcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhcccccch
Confidence 98665421 12211000 00 000122211 0
Q ss_pred HHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhh
Q 004248 641 KIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCA 689 (766)
Q Consensus 641 ~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~ 689 (766)
..+..+...+..+-. .+.++|+|++|.||++++++.+.|.||+.+..
T Consensus 197 ~~~~~l~~~l~~lp~--~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~ 243 (362)
T 3ovc_A 197 QALDELMLWAEDCPE--VRHLVHADFGSNNVLTDNGRITAVIDWSEAMF 243 (362)
T ss_dssp HHHHHHHHHGGGCCC--CCEEECSSCSSTTEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHHHHhhCCC--CcEEEeCCCCCCeEEEeCCCEEEEECCccccc
Confidence 111222222222221 25789999999999998877788999998754
No 419
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.25 E-value=3.7e-08 Score=95.83 Aligned_cols=39 Identities=15% Similarity=0.151 Sum_probs=19.5
Q ss_pred CCCCCEEEccCC-CCCcc----CCcccCCCCCCcEEEeecCcCC
Q 004248 141 LPTLQALDLRSC-SISGV----IPFSLGNLTNLTSLYLSDNGLT 179 (766)
Q Consensus 141 l~~L~~L~Ls~N-~l~g~----~p~~l~~l~~L~~L~Ls~N~l~ 179 (766)
.++|++|+|++| .+... +...+...++|++|+|++|.+.
T Consensus 35 ~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~ 78 (185)
T 1io0_A 35 DPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSN 78 (185)
T ss_dssp CTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCC
T ss_pred CCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCC
Confidence 556666666666 55421 2223344445555555555543
No 420
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.24 E-value=5e-08 Score=94.93 Aligned_cols=91 Identities=16% Similarity=0.155 Sum_probs=46.7
Q ss_pred hhccCCCCCEEecCCC-CCCCC----CchhhhhCCCCCCEEEccCCCCCcc----CCcccCCCCCCcEEEeecCcCCCC-
Q 004248 112 ALVNLTHLASFNASRF-LLPGS----IPDWLGQQLPTLQALDLRSCSISGV----IPFSLGNLTNLTSLYLSDNGLTGT- 181 (766)
Q Consensus 112 ~l~~l~~L~~L~ls~n-~l~g~----ip~~~~~~l~~L~~L~Ls~N~l~g~----~p~~l~~l~~L~~L~Ls~N~l~~~- 181 (766)
.+...+.|+.|++++| .+... +...+. ..++|++|+|++|.|... +...+...++|++|+|++|.++..
T Consensus 31 ~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~-~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g 109 (185)
T 1io0_A 31 IQNNDPDLEEVNLNNIMNIPVPTLKACAEALK-TNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSG 109 (185)
T ss_dssp HHTTCTTCCEEECTTCTTCCHHHHHHHHHHHT-TCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHH
T ss_pred HHhcCCCCCEEEecCCCCCCHHHHHHHHHHHH-hCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHH
Confidence 3455666777777766 55422 222222 256677777777766532 222333445566666666665532
Q ss_pred ---CCccccCCCCCCEEEc--cCCCCC
Q 004248 182 ---IPSSLGQLSVLSVLDL--SRNSLT 203 (766)
Q Consensus 182 ---~p~~l~~L~~L~~L~L--s~N~l~ 203 (766)
+...+...++|++|+| ++|.+.
T Consensus 110 ~~~l~~~L~~n~~L~~L~L~~~~N~i~ 136 (185)
T 1io0_A 110 ILALVEALQSNTSLIELRIDNQSQPLG 136 (185)
T ss_dssp HHHHHHGGGGCSSCCEEECCCCSSCCC
T ss_pred HHHHHHHHHhCCCceEEEecCCCCCCC
Confidence 2333444445555555 445443
No 421
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.23 E-value=4.5e-05 Score=82.64 Aligned_cols=245 Identities=11% Similarity=0.066 Sum_probs=109.5
Q ss_pred hhhccCCCCCEEecCCCCCCCCCchhhhhCCCCCCEEEccCCCCCccCCcccCCCCCCcEEEeecCcCCCCCCccccCCC
Q 004248 111 DALVNLTHLASFNASRFLLPGSIPDWLGQQLPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPSSLGQLS 190 (766)
Q Consensus 111 ~~l~~l~~L~~L~ls~n~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~ 190 (766)
.++.++++|+.+++..+ + -.|+...+..+ +|+.+.+..+ ++..-...|.+ .+|+.+.+..+- +..-...|.+ .
T Consensus 63 ~aF~~C~~L~~I~lp~~-v-~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~-~~L~~i~lp~~~-~~i~~~~F~~-~ 135 (379)
T 4h09_A 63 ANFNSCYNMTKVTVAST-V-TSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQG-TDLDDFEFPGAT-TEIGNYIFYN-S 135 (379)
T ss_dssp TTTTTCTTCCEEEECTT-C-CEECTTTTTTC-CCCEEEECTT-CCEECTTTTTT-CCCSEEECCTTC-CEECTTTTTT-C
T ss_pred HHhhCCCCCCEEEeCCc-c-eEechhhhcCC-CCceEECCce-eeEeccceecc-CCcccccCCCcc-cccccccccc-c
Confidence 35667777777777543 2 23444433334 5666665533 33333334444 367777776542 2122223333 2
Q ss_pred CCCEEEccCCCCCCCCCcccCCCCCCCEEeccCCcCCC------------CCCCCCCCCCCccEEEccCCCCCCCCcccc
Q 004248 191 VLSVLDLSRNSLTGNIPTSFGLLKNLSSLDISSNYLTG------------SIPPGLGTLSKLQYLNVSNNSLASSIPAQL 258 (766)
Q Consensus 191 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~------------~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l 258 (766)
+|+.+.+..+ ++..-...|..+.+|+.+.+..+.... .....+....++..+.+..+.- ......+
T Consensus 136 ~l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~f 213 (379)
T 4h09_A 136 SVKRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAAKTGTEFTIPSTVK-TVTAYGF 213 (379)
T ss_dssp CCCEEEECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTTCCCSEEECCTTCC-EECTTTT
T ss_pred eeeeeeccce-eeccccchhcccccccccccccccceeecccceecccccceecccccccccccccccccee-EEeeccc
Confidence 4555544332 333334456667777776665433210 1111222333344333322211 1122233
Q ss_pred CCCCCCCEEEccCCcCCccCCcccCCCCCCCEEEccCccCccccCCCccCCCCcccEEEccCCCCCCCCCcccCCCCCCC
Q 004248 259 GDLDSLVDLDLSMNSLSGSVPSELRGLRSLQKFVIGNNFLSGNLSVNLFPTVSQLQIIVLRQNGFTGPPPDVLWSMPQLR 338 (766)
Q Consensus 259 ~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~ 338 (766)
....+|+.+.+..+ +.......+.++..|+.+.+..+ ++ .+....|....+|+.+.+.. .++......|.++++|+
T Consensus 214 ~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~-~I~~~aF~~~~~l~~i~l~~-~i~~i~~~aF~~c~~L~ 289 (379)
T 4h09_A 214 SYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VT-SIGSFLLQNCTALKTLNFYA-KVKTVPYLLCSGCSNLT 289 (379)
T ss_dssp TTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CC-EECTTTTTTCTTCCEEEECC-CCSEECTTTTTTCTTCC
T ss_pred ccccccceeeeccc-eeEEccccccCCccceEEEcCCC-cc-EeCccccceeehhccccccc-cceeccccccccccccc
Confidence 44445555554433 22222334445555555555443 21 23334444455555555432 23333344455555555
Q ss_pred EEEccCCCCCCCCCcccccCCCCCcEEEccC
Q 004248 339 LLDISRNNFTGPLPNSRSNVNTSTVELNISQ 369 (766)
Q Consensus 339 ~L~Ls~N~l~g~~p~~~~~~~~~l~~L~ls~ 369 (766)
.+++.++.++ .|+...+..+.+|+.+++..
T Consensus 290 ~i~l~~~~i~-~I~~~aF~~c~~L~~i~lp~ 319 (379)
T 4h09_A 290 KVVMDNSAIE-TLEPRVFMDCVKLSSVTLPT 319 (379)
T ss_dssp EEEECCTTCC-EECTTTTTTCTTCCEEECCT
T ss_pred cccccccccc-eehhhhhcCCCCCCEEEcCc
Confidence 5555554444 33333444445555555543
No 422
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.13 E-value=3.3e-06 Score=90.92 Aligned_cols=81 Identities=10% Similarity=0.021 Sum_probs=55.4
Q ss_pred ccee-ecCCcceEEEEEEc-------CCcEEEEEEeeccc---c-CHHHHHHHHHHHhhcCC---CCcccceeEEEecC-
Q 004248 539 ANLI-KNGHSGDLFRGILE-------GGIPVVIKRIDLQS---V-KTEAYLLELDFFSKVSH---ARLVPLLGHCMERE- 602 (766)
Q Consensus 539 ~~~i-g~G~~g~Vy~~~~~-------~g~~vavK~l~~~~---~-~~~~~~~E~~~l~~l~H---~niv~l~~~~~~~~- 602 (766)
.+.| +.|....+|+.... ++..+++|.-.... . ....+.+|+++++.++. -.+.++++++.+..
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~ 104 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV 104 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence 3567 88888999998754 26788999765433 1 13467889999988842 24566776554321
Q ss_pred -CcEEEEEeeCCCCChhh
Q 004248 603 -NEKFLVYKYMPNGDLSS 619 (766)
Q Consensus 603 -~~~~lV~Ey~~~GsL~~ 619 (766)
+..|+||||++|..+.+
T Consensus 105 ~g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 105 LGTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp TSSCEEEEECCCCBCCCB
T ss_pred cCCceEEEEecCCCChhh
Confidence 34689999999877654
No 423
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.07 E-value=0.00015 Score=78.48 Aligned_cols=274 Identities=12% Similarity=0.061 Sum_probs=167.2
Q ss_pred cCCCCCEEecCCCCCCCCCchhhhhCCCCCCEEEccCCCCCccCCcccCCCCCCcEEEeecCcCCCCCCccccCCCCCCE
Q 004248 115 NLTHLASFNASRFLLPGSIPDWLGQQLPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPSSLGQLSVLSV 194 (766)
Q Consensus 115 ~l~~L~~L~ls~n~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~ 194 (766)
.-.+|+.+.+... + -.|++.-+.++.+|+.++|..+ ++.+-..+|.++ +|+.+.+..+ ++..-...|.+ .+|+.
T Consensus 44 ~~~~i~~v~ip~~-v-t~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~-~~L~~ 117 (379)
T 4h09_A 44 DRDRISEVRVNSG-I-TSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQG-TDLDD 117 (379)
T ss_dssp GGGGCSEEEECTT-E-EEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTT-CCCSE
T ss_pred cccCCEEEEeCCC-c-cChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEeccceecc-CCccc
Confidence 3445555555432 1 2344444455788888888644 555555667665 5777776543 44222333433 47888
Q ss_pred EEccCCCCCCCCCcccCCCCCCCEEeccCCcCCCCCCCCCCCCCCccEEEccCCCCCC------------CCccccCCCC
Q 004248 195 LDLSRNSLTGNIPTSFGLLKNLSSLDISSNYLTGSIPPGLGTLSKLQYLNVSNNSLAS------------SIPAQLGDLD 262 (766)
Q Consensus 195 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~------------~~p~~l~~l~ 262 (766)
+++..+ ++..-...|.+. +|+.+.+..+ ++..-...+..+.+++.+.+..+.... .....+....
T Consensus 118 i~lp~~-~~~i~~~~F~~~-~l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (379)
T 4h09_A 118 FEFPGA-TTEIGNYIFYNS-SVKRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAAK 194 (379)
T ss_dssp EECCTT-CCEECTTTTTTC-CCCEEEECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTTC
T ss_pred ccCCCc-cccccccccccc-eeeeeeccce-eeccccchhcccccccccccccccceeecccceecccccceeccccccc
Confidence 887654 332333344443 5666555433 332334456677778777766554321 1222344455
Q ss_pred CCCEEEccCCcCCccCCcccCCCCCCCEEEccCccCccccCCCccCCCCcccEEEccCCCCCCCCCcccCCCCCCCEEEc
Q 004248 263 SLVDLDLSMNSLSGSVPSELRGLRSLQKFVIGNNFLSGNLSVNLFPTVSQLQIIVLRQNGFTGPPPDVLWSMPQLRLLDI 342 (766)
Q Consensus 263 ~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~ls~N~l~g~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L 342 (766)
.+..+.+..+. .......+....+|+.+.+..+-- .+....|.....|+.+.+..+ ++......|.++.+|+.+++
T Consensus 195 ~~~~~~~~~~~-~~i~~~~f~~~~~l~~i~~~~~~~--~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l 270 (379)
T 4h09_A 195 TGTEFTIPSTV-KTVTAYGFSYGKNLKKITITSGVT--TLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNF 270 (379)
T ss_dssp CCSEEECCTTC-CEECTTTTTTCSSCSEEECCTTCC--EECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEE
T ss_pred cccccccccce-eEEeecccccccccceeeecccee--EEccccccCCccceEEEcCCC-ccEeCccccceeehhccccc
Confidence 56666554432 223445677788999999876632 456667788899999999765 66666778999999999999
Q ss_pred cCCCCCCCCCcccccCCCCCcEEEccCCcCc---cCCCcCCCCCCEEeccCCcCccccChhhhhcc
Q 004248 343 SRNNFTGPLPNSRSNVNTSTVELNISQNMFY---GGLTPVLGRFRLVDLSGNYFEGRVPEYVHSNA 405 (766)
Q Consensus 343 s~N~l~g~~p~~~~~~~~~l~~L~ls~N~l~---g~~~~~l~~l~~ldLs~N~l~g~~p~~~~~~~ 405 (766)
..+ ++ .++...+..+.+|+.+++.++.+. ........+|+.++|..+ ++ .|++..+.++
T Consensus 271 ~~~-i~-~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~-~I~~~aF~~C 332 (379)
T 4h09_A 271 YAK-VK-TVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LK-TIQVYAFKNC 332 (379)
T ss_dssp CCC-CS-EECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTC
T ss_pred ccc-ce-eccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-cc-EEHHHHhhCC
Confidence 755 44 566666777899999999887654 234455678999999755 33 3444433333
No 424
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=98.04 E-value=1.5e-05 Score=84.99 Aligned_cols=146 Identities=14% Similarity=0.204 Sum_probs=82.5
Q ss_pred cceeecCCcceEEEEEEcCCcEEEEEEeeccccCHHHHHHHHHHHhhcC-----CCCcccce-e-EEEecCCcEEEEEee
Q 004248 539 ANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVS-----HARLVPLL-G-HCMERENEKFLVYKY 611 (766)
Q Consensus 539 ~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~-----H~niv~l~-~-~~~~~~~~~~lV~Ey 611 (766)
.+.|+.|..+.||+....+| .+++|+.... .+++..|.++++.++ .|.++... | .+....+..++||||
T Consensus 37 ~~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~---~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~ 112 (346)
T 2q83_A 37 IDVIQGNQMALVWKVHTDSG-AVCLKRIHRP---EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDW 112 (346)
T ss_dssp EEECC----CEEEEEEETTE-EEEEEEECSC---HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEEC
T ss_pred eeeccccccCcEEEEEeCCC-CEEEEecCCC---HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEe
Confidence 34566677899999987665 4899988652 234445666665553 34444311 1 111224568999999
Q ss_pred CCCCChh--------------hhhhccCCC---CCc----CCCCCHHHHH------------------------------
Q 004248 612 MPNGDLS--------------SSLYRKTNT---EDD----LQSLDWITRL------------------------------ 640 (766)
Q Consensus 612 ~~~GsL~--------------~~l~~~~~~---~~~----~~~l~~~~~~------------------------------ 640 (766)
++|.++. ..+|..... ... ...-.|....
T Consensus 113 i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 192 (346)
T 2q83_A 113 IEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEI 192 (346)
T ss_dssp CCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHH
T ss_pred ecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHH
Confidence 9986552 112321110 000 0112343211
Q ss_pred -HHHHHHHHHhhhhcc----------CCCCCeEecCCCCCCeeeCCCCcEEeccchhhh
Q 004248 641 -KIAIGAAEGLSYLHH----------ECTLPFVHRDVQASSILLDDKFEVRLGSLSEVC 688 (766)
Q Consensus 641 -~i~~~ia~gL~yLH~----------~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~ 688 (766)
.+...+.+++++|+. ...+.++|+|+++.||+++.++.+.|.||+.+.
T Consensus 193 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 193 DGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 011123445666653 123589999999999999888899999999874
No 425
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.90 E-value=2.6e-05 Score=85.26 Aligned_cols=74 Identities=12% Similarity=0.114 Sum_probs=50.2
Q ss_pred cceeecCCcceEEEEEEc-CCcEEEEEEeeccc--------cCHHHHHHHHHHHhhcCC--CCcc-cceeEEEecCCcEE
Q 004248 539 ANLIKNGHSGDLFRGILE-GGIPVVIKRIDLQS--------VKTEAYLLELDFFSKVSH--ARLV-PLLGHCMERENEKF 606 (766)
Q Consensus 539 ~~~ig~G~~g~Vy~~~~~-~g~~vavK~l~~~~--------~~~~~~~~E~~~l~~l~H--~niv-~l~~~~~~~~~~~~ 606 (766)
.+.+|.|.++.||++... +++.|+||...... ...+++.+|.++++.++. |..+ +++. + + ++..+
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~-~-d-~~~~~ 111 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFY-S-D-TEMAV 111 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEE-E-E-TTTTE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEE-E-c-CCccE
Confidence 568999999999999754 56889999864321 123467889999988743 4444 4443 2 3 34568
Q ss_pred EEEeeCCCC
Q 004248 607 LVYKYMPNG 615 (766)
Q Consensus 607 lV~Ey~~~G 615 (766)
+||||+++.
T Consensus 112 lvmE~l~g~ 120 (397)
T 2olc_A 112 TVMEDLSHL 120 (397)
T ss_dssp EEECCCTTS
T ss_pred EEEEeCCCc
Confidence 999999864
No 426
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.71 E-value=0.00015 Score=75.22 Aligned_cols=77 Identities=13% Similarity=0.188 Sum_probs=56.3
Q ss_pred CCccceeecCCcceEEEEEEcCCcEEEEEEeeccccC-HHHHHHHHHHHhhcCCC---CcccceeEEEecCCcEEEEEee
Q 004248 536 FSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVK-TEAYLLELDFFSKVSHA---RLVPLLGHCMERENEKFLVYKY 611 (766)
Q Consensus 536 ~~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~-~~~~~~E~~~l~~l~H~---niv~l~~~~~~~~~~~~lV~Ey 611 (766)
...++.+|.|..+.||+..+.+|+.|++|+-...... ...|.+|++.|+.+.-. -+.+.++ .. .-++||||
T Consensus 17 v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~--~~---~~~lv~e~ 91 (288)
T 3f7w_A 17 VAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAG--WD---DRTLAMEW 91 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEE--EE---TTEEEEEC
T ss_pred eEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEe--cc---CceEEEEe
Confidence 4556789999999999999999999999986543322 45688999999988422 2333443 22 24899999
Q ss_pred CCCCCh
Q 004248 612 MPNGDL 617 (766)
Q Consensus 612 ~~~GsL 617 (766)
++++..
T Consensus 92 l~~~~~ 97 (288)
T 3f7w_A 92 VDERPP 97 (288)
T ss_dssp CCCCCC
T ss_pred ecccCC
Confidence 987654
No 427
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.46 E-value=0.0011 Score=69.96 Aligned_cols=163 Identities=11% Similarity=0.086 Sum_probs=90.6
Q ss_pred ccHHHHHHHhCCCC-----ccceeecCCcceEEEEEEcCCcEEEEEEeeccccCHHHHHHHHHHHhhcCCC--Cccccee
Q 004248 524 FTYQQLLAATGDFS-----DANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHA--RLVPLLG 596 (766)
Q Consensus 524 ~~~~~l~~~~~~~~-----~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~H~--niv~l~~ 596 (766)
++.+++......|. ....++ |....||+....+|+.+++|.........+.+..|.++++.++.. .+.+.+.
T Consensus 11 l~~~~i~~~l~~~g~~~~~~~~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~~~~~~~~E~~~~~~L~~~g~~vp~~~~ 89 (328)
T 1zyl_A 11 LHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDEDRRRFVVKFYRPERWTADQILEEHQFALQLVNDEVPVAAPVA 89 (328)
T ss_dssp CCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCTTCCCEEEEEECTTTSCHHHHHHHHHHHHHHHHTTCSBCCCCC
T ss_pred CCHHHHHHHHHHcCCCCCceEEeec-CcccceEEEEcCCCCEEEEEEcCCCCCCHHHHHHHHHHHHHHHHcCCeecceee
Confidence 44445544443332 234566 888899998877787899999864433456778888888887422 2344443
Q ss_pred E----EEecCCcEEEEEeeCCCCChhh-----------h---hhccCC--CCCcCCCCCHHHH-----------------
Q 004248 597 H----CMERENEKFLVYKYMPNGDLSS-----------S---LYRKTN--TEDDLQSLDWITR----------------- 639 (766)
Q Consensus 597 ~----~~~~~~~~~lV~Ey~~~GsL~~-----------~---l~~~~~--~~~~~~~l~~~~~----------------- 639 (766)
. ....++..++||||++|..+.. . +|.... .......+++...
T Consensus 90 ~~g~~~~~~~g~~~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 169 (328)
T 1zyl_A 90 FNGQTLLNHQGFYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSG 169 (328)
T ss_dssp BTTBSCEEETTEEEEEEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTT
T ss_pred cCCcEEEEECCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHH
Confidence 2 1111345688999999754321 1 222110 0000112233211
Q ss_pred -----HHHHHHHHHHhhhhc-cCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhh
Q 004248 640 -----LKIAIGAAEGLSYLH-HECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCA 689 (766)
Q Consensus 640 -----~~i~~~ia~gL~yLH-~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~ 689 (766)
...+.+++..++-.. ......++|+|+++.||+++ + .+.|.||+.+..
T Consensus 170 ~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 170 LKAAFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp THHHHHHHHHHHHHHHHHHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred HHHHHHHHHHHHHHHHHHHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 011111122222111 11234678999999999999 4 899999987653
No 428
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.42 E-value=0.0013 Score=68.88 Aligned_cols=144 Identities=11% Similarity=0.133 Sum_probs=92.5
Q ss_pred CccceeecCCcceEEEEEEcCCcEEEEEEeeccccCHHHHHHHHHHHhhcC---CCCcccceeEEEecCCcEEEEEeeCC
Q 004248 537 SDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVS---HARLVPLLGHCMERENEKFLVYKYMP 613 (766)
Q Consensus 537 ~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~---H~niv~l~~~~~~~~~~~~lV~Ey~~ 613 (766)
...+.|+.|....+|+... ++..+++|+-... ....|.+|.+.|+.+. ...+.+.++++.. ++..++||||++
T Consensus 39 ~~~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~--~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~-~g~~~lvme~l~ 114 (312)
T 3jr1_A 39 KHKEKLYSGEMNEIWLIND-EVQTVFVKINERS--YRSMFRAEADQLALLAKTNSINVPLVYGIGNS-QGHSFLLLEALN 114 (312)
T ss_dssp CEEEEECCSSSSEEEEEES-SSCEEEEEEEEGG--GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEEC-SSEEEEEEECCC
T ss_pred eeeEEeCCccceeeeEEEE-CCCeEEEEeCCcc--cHHHHHHHHHHHHHHHhhCCCCcceEEEEeec-CCceEEEEEecc
Confidence 3456799999999999875 4668889987543 3567899999998884 3557778776654 457899999999
Q ss_pred CCChhh-----------hhhccCCCC------C---------cCCCCCHHHHH---HHH--HH--------------HHH
Q 004248 614 NGDLSS-----------SLYRKTNTE------D---------DLQSLDWITRL---KIA--IG--------------AAE 648 (766)
Q Consensus 614 ~GsL~~-----------~l~~~~~~~------~---------~~~~l~~~~~~---~i~--~~--------------ia~ 648 (766)
+..+.. .||...... . ..-.-+|.+.. ++. .+ ++.
T Consensus 115 G~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~ 194 (312)
T 3jr1_A 115 KSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQ 194 (312)
T ss_dssp CCCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHH
T ss_pred CCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHH
Confidence 876521 234322100 0 00012565421 111 11 111
Q ss_pred H-hhhhc-cCCCCCeEecCCCCCCeeeCCCCcEEeccch
Q 004248 649 G-LSYLH-HECTLPFVHRDVQASSILLDDKFEVRLGSLS 685 (766)
Q Consensus 649 g-L~yLH-~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG 685 (766)
. ...|. ....+.+||+|+.+.||+++.++ +.|.||.
T Consensus 195 ~l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 195 IVADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 1 12332 12357899999999999999887 8899984
No 429
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.38 E-value=3.1e-05 Score=73.76 Aligned_cols=83 Identities=17% Similarity=0.147 Sum_probs=50.1
Q ss_pred CCCEEEccCCCCCccCCcccCCCCCCcEEEeecCc-CCCCCCccccCC----CCCCEEEccCCC-CCCCCCcccCCCCCC
Q 004248 143 TLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNG-LTGTIPSSLGQL----SVLSVLDLSRNS-LTGNIPTSFGLLKNL 216 (766)
Q Consensus 143 ~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~-l~~~~p~~l~~L----~~L~~L~Ls~N~-l~~~~p~~~~~l~~L 216 (766)
.|+.|||+++.++..--..+.++++|++|+|++|. ++..--..+..+ ++|++|+|++|. ++..--..+..+++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 57888888887765444456777888888888774 543222234443 257777777764 543222234556666
Q ss_pred CEEeccCCc
Q 004248 217 SSLDISSNY 225 (766)
Q Consensus 217 ~~L~Ls~N~ 225 (766)
++|+|+++.
T Consensus 142 ~~L~L~~c~ 150 (176)
T 3e4g_A 142 KYLFLSDLP 150 (176)
T ss_dssp CEEEEESCT
T ss_pred CEEECCCCC
Confidence 666666653
No 430
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.30 E-value=0.00045 Score=72.82 Aligned_cols=164 Identities=12% Similarity=0.107 Sum_probs=90.5
Q ss_pred cccHHHHHHHhCCCCc-----cceeecCCcceEEEEEEcCCcEEEEEEeeccccCHHHHHHHHHHHhhcCCCC--cccce
Q 004248 523 SFTYQQLLAATGDFSD-----ANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHAR--LVPLL 595 (766)
Q Consensus 523 ~~~~~~l~~~~~~~~~-----~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~H~n--iv~l~ 595 (766)
.++.+++......|.. .+.|+.|....+|+....+| .+++|..... ...+++..|++++..++... +.+++
T Consensus 6 ~~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~-~~~~~l~~e~~~l~~L~~~g~~vP~~~ 83 (322)
T 2ppq_A 6 DITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKR-VEKNDLPFFLGLMQHLAAKGLSCPLPL 83 (322)
T ss_dssp CCCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC----CCHHHHHHHHHHHHHHTTCCCCCBC
T ss_pred cCCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCC-CCHHHHHHHHHHHHHHHHCCCCCCccc
Confidence 3566677777666754 34567788889999987666 6889987642 12345667888887774222 22333
Q ss_pred eE-----EEecCCcEEEEEeeCCCCChhh--------------hhhccCCC-C-Cc---CCCCCHHHHHHH---------
Q 004248 596 GH-----CMERENEKFLVYKYMPNGDLSS--------------SLYRKTNT-E-DD---LQSLDWITRLKI--------- 642 (766)
Q Consensus 596 ~~-----~~~~~~~~~lV~Ey~~~GsL~~--------------~l~~~~~~-~-~~---~~~l~~~~~~~i--------- 642 (766)
.. +....+..++||||++|..+.. .+|..... . .. .....|.....-
T Consensus 84 ~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 163 (322)
T 2ppq_A 84 PRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVE 163 (322)
T ss_dssp CBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTS
T ss_pred CCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhh
Confidence 21 1111345789999999865421 12221110 0 00 001124331110
Q ss_pred ---HHHHHHHhhhhcc----CCCCCeEecCCCCCCeeeCCCCcEEeccchhhh
Q 004248 643 ---AIGAAEGLSYLHH----ECTLPFVHRDVQASSILLDDKFEVRLGSLSEVC 688 (766)
Q Consensus 643 ---~~~ia~gL~yLH~----~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~ 688 (766)
...+.+.++++++ .....++|+|+.+.||+++++..+.|.||+.+.
T Consensus 164 ~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 164 KGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp TTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred hhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 0113333444432 123478999999999999987666899998764
No 431
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.25 E-value=0.00088 Score=73.56 Aligned_cols=73 Identities=11% Similarity=0.066 Sum_probs=44.1
Q ss_pred ccceeecCCcceEEEEEEcCCcEEEEEEeec-------c-cc--CHHHHHHHHHHHhh-cCCCCcccceeEEEecCCcEE
Q 004248 538 DANLIKNGHSGDLFRGILEGGIPVVIKRIDL-------Q-SV--KTEAYLLELDFFSK-VSHARLVPLLGHCMERENEKF 606 (766)
Q Consensus 538 ~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~-------~-~~--~~~~~~~E~~~l~~-l~H~niv~l~~~~~~~~~~~~ 606 (766)
..+.+|.|..+.||++.. +++.++||.... . .. .+..+..|+..+.. ..+..+.+++.+. ++..+
T Consensus 38 ~i~~l~~G~~n~vyrv~~-~~~~~vvK~~~p~~~~~~~~~~~~~~~~~~E~e~l~~~~~~~~~~vP~v~~~~---~~~~~ 113 (420)
T 2pyw_A 38 VIKEVGDGNLNFVFIVVG-SSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFD---RTMAL 113 (420)
T ss_dssp EEEECCCSSSCEEEEEEC-SSCEEEEEECCSBCTTTCTTSBCCTTHHHHHHHHHHHHHHHSGGGSCCEEEEE---TTTTE
T ss_pred EEEEccCCCcEEEEEEEc-CCceEEEEECchhhcccCcccccchhHHHHHHHHHHHHHhhCCCCCCeEEEEC---CCccE
Confidence 357789999999999864 467899994321 1 11 22334444433322 2234455566533 34679
Q ss_pred EEEeeC-CC
Q 004248 607 LVYKYM-PN 614 (766)
Q Consensus 607 lV~Ey~-~~ 614 (766)
+||||+ ++
T Consensus 114 lv~e~l~~g 122 (420)
T 2pyw_A 114 IGMRYLEPP 122 (420)
T ss_dssp EEECCCCTT
T ss_pred EEEeecCCc
Confidence 999999 76
No 432
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.20 E-value=5e-05 Score=72.29 Aligned_cols=83 Identities=16% Similarity=0.176 Sum_probs=42.9
Q ss_pred CCCcEEEeecCcCCCCCCccccCCCCCCEEEccCCC-CCCCCCcccCCC----CCCCEEeccCCc-CCCCCCCCCCCCCC
Q 004248 166 TNLTSLYLSDNGLTGTIPSSLGQLSVLSVLDLSRNS-LTGNIPTSFGLL----KNLSSLDISSNY-LTGSIPPGLGTLSK 239 (766)
Q Consensus 166 ~~L~~L~Ls~N~l~~~~p~~l~~L~~L~~L~Ls~N~-l~~~~p~~~~~l----~~L~~L~Ls~N~-l~~~~p~~l~~l~~ 239 (766)
.+|++|||+++.++..--..+.++++|+.|+|++|. ++..--..++.+ ++|++|+|++|. ++..--..+.++++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 467888888887765434456677777777777764 442211223332 245666665553 33211112334444
Q ss_pred ccEEEccCC
Q 004248 240 LQYLNVSNN 248 (766)
Q Consensus 240 L~~L~Ls~N 248 (766)
|++|+|+++
T Consensus 141 L~~L~L~~c 149 (176)
T 3e4g_A 141 LKYLFLSDL 149 (176)
T ss_dssp CCEEEEESC
T ss_pred CCEEECCCC
Confidence 555554444
No 433
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.11 E-value=0.001 Score=69.39 Aligned_cols=73 Identities=11% Similarity=0.059 Sum_probs=45.4
Q ss_pred CccceeecCCcceEEEEEEcCCcEEEEEEeeccccCHHHHHHHHHHHhhcCCCCcc-cceeEEEecCCcEEEEEeeC-CC
Q 004248 537 SDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLV-PLLGHCMERENEKFLVYKYM-PN 614 (766)
Q Consensus 537 ~~~~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~H~niv-~l~~~~~~~~~~~~lV~Ey~-~~ 614 (766)
...+.|+.|....+|+. ..+++|.-...........+|+++++.+....+. +++++ . .+.-++|+||+ ++
T Consensus 21 ~~i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~~~~--~-~~~~~~v~e~i~~g 92 (301)
T 3dxq_A 21 TGPLERLGGLTNLVFRA-----GDLCLRIPGKGTEEYINRANEAVAAREAAKAGVSPEVLHV--D-PATGVMVTRYIAGA 92 (301)
T ss_dssp CSCEEEESCSSEEEEEE-----TTEEEEEECC----CCCHHHHHHHHHHHHHTTSSCCEEEE--C-TTTCCEEEECCTTC
T ss_pred cceeEcCCcccccccee-----eeEEEECCCCCccceeCHHHHHHHHHHHHHcCCCCceEEE--E-CCCCEEEEeecCCC
Confidence 33688999999999998 5688887754321111235688888777533343 44432 2 23457999999 65
Q ss_pred CCh
Q 004248 615 GDL 617 (766)
Q Consensus 615 GsL 617 (766)
.++
T Consensus 93 ~~l 95 (301)
T 3dxq_A 93 QTM 95 (301)
T ss_dssp EEC
T ss_pred ccC
Confidence 444
No 434
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.78 E-value=0.0032 Score=67.91 Aligned_cols=143 Identities=18% Similarity=0.168 Sum_probs=82.4
Q ss_pred cceeecCCcceEEEEEEc--------CCcEEEEEEeeccccCHHHHHHHHHHHhhcCCCCc-ccceeEEEecCCcEEEEE
Q 004248 539 ANLIKNGHSGDLFRGILE--------GGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARL-VPLLGHCMERENEKFLVY 609 (766)
Q Consensus 539 ~~~ig~G~~g~Vy~~~~~--------~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~~~~~~~~~~~~lV~ 609 (766)
.+.+..|-...+|+.... +++.+++|+-.........+.+|.++++.+.-..+ .++++++ + + .+||
T Consensus 55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~-~--~--g~v~ 129 (379)
T 3feg_A 55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAILQGVDSLVLESVMFAILAERSLGPQLYGVF-P--E--GRLE 129 (379)
T ss_dssp CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC---CCHHHHHHHHHHHHHHHHTTSSCCEEEEE-T--T--EEEE
T ss_pred EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCccchHHHHHHHHHHHHHHHhcCCCCeEEEEc-C--C--ccEE
Confidence 356777888899998864 24789999853322235567799999988853334 3455433 2 2 3999
Q ss_pred eeCCCCChhhh-----------------hhccCCCCCcCCCC--CHHHHHHHHHHHHHH-------------------hh
Q 004248 610 KYMPNGDLSSS-----------------LYRKTNTEDDLQSL--DWITRLKIAIGAAEG-------------------LS 651 (766)
Q Consensus 610 Ey~~~GsL~~~-----------------l~~~~~~~~~~~~l--~~~~~~~i~~~ia~g-------------------L~ 651 (766)
||++|.+|..- ||..... ..... -|.+..++..++... ++
T Consensus 130 e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~--~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 207 (379)
T 3feg_A 130 QYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMP--FTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMG 207 (379)
T ss_dssp ECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCS--SCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHH
T ss_pred EEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCC--CCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHH
Confidence 99998655311 1221110 01112 245555555443221 22
Q ss_pred hh----cc-CCCCCeEecCCCCCCeeeCCC----CcEEeccchhhh
Q 004248 652 YL----HH-ECTLPFVHRDVQASSILLDDK----FEVRLGSLSEVC 688 (766)
Q Consensus 652 yL----H~-~~~~~iiHrDlKp~NILl~~~----~~~kl~DFG~a~ 688 (766)
.| .. .....++|+|+.+.||+++.+ +.+.+.||..|.
T Consensus 208 ~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~ 253 (379)
T 3feg_A 208 NLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS 253 (379)
T ss_dssp HHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred HHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence 22 11 123468899999999999876 789999998775
No 435
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.70 E-value=0.0064 Score=64.25 Aligned_cols=146 Identities=13% Similarity=0.079 Sum_probs=72.1
Q ss_pred cceeecCCcce-EEEEEEcCCcEEEEEEeeccccCHHHHHHHHHHHhhcCC--CCcccceeEEEecCCcEEEEEeeCCCC
Q 004248 539 ANLIKNGHSGD-LFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSH--ARLVPLLGHCMERENEKFLVYKYMPNG 615 (766)
Q Consensus 539 ~~~ig~G~~g~-Vy~~~~~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~H--~niv~l~~~~~~~~~~~~lV~Ey~~~G 615 (766)
.+.++.|.... +|+....+|..+++|...... .+++..|+++++.+.. -.+.+++.+. . ++. ++|||++.+.
T Consensus 23 ~~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~--~~~~~~e~~~l~~L~~~g~~vP~v~~~d-~-~~g-~ll~e~l~~~ 97 (333)
T 3csv_A 23 RTPLAGDASSRRYQRLRSPTGAKAVLMDWSPEE--GGDTQPFVDLAQYLRNLDISAPEIYAEE-H-ARG-LLLIEDLGDA 97 (333)
T ss_dssp ECC--------CCEEEECTTCCEEEEEECCTTT--TCCSHHHHHHHHHHHHTTCBCCCEEEEE-T-TTT-EEEECCCCSC
T ss_pred eeECCCCCCCceEEEEEcCCCCeEEEEECCCCC--CccccHHHHHHHHHHhCCCCCCceeeec-C-CCC-EEEEeeCCCc
Confidence 34565554444 667765446677777654322 1334567777776642 2244555532 2 222 7899999876
Q ss_pred ChhhhhhccCC-------------------CCCcCCCCCHHHHH------------H--------HHHHHHHHhhhhc--
Q 004248 616 DLSSSLYRKTN-------------------TEDDLQSLDWITRL------------K--------IAIGAAEGLSYLH-- 654 (766)
Q Consensus 616 sL~~~l~~~~~-------------------~~~~~~~l~~~~~~------------~--------i~~~ia~gL~yLH-- 654 (766)
.+.+++..... .......++..... . ....+.+.++.+.
T Consensus 98 ~l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~ 177 (333)
T 3csv_A 98 LFTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSA 177 (333)
T ss_dssp BHHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHH
T ss_pred chHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHh
Confidence 66544321100 00000112111000 0 0001111122221
Q ss_pred -cCCCCCeEecCCCCCCeeeCCC----CcEEeccchhhhh
Q 004248 655 -HECTLPFVHRDVQASSILLDDK----FEVRLGSLSEVCA 689 (766)
Q Consensus 655 -~~~~~~iiHrDlKp~NILl~~~----~~~kl~DFG~a~~ 689 (766)
....+.++|+|+.+.||+++.+ ..+.|.||+.+..
T Consensus 178 ~~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 178 QLEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp HCCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred cccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 1123478999999999999875 6799999998753
No 436
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.49 E-value=0.0054 Score=67.85 Aligned_cols=74 Identities=11% Similarity=0.017 Sum_probs=47.3
Q ss_pred cceeecCCcceEEEEEEcC-CcEEEEEEeeccccCHHHHHHHHHHHhhcCCCCcc-cceeEEEecCCcEEEEEeeCCCCC
Q 004248 539 ANLIKNGHSGDLFRGILEG-GIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLV-PLLGHCMERENEKFLVYKYMPNGD 616 (766)
Q Consensus 539 ~~~ig~G~~g~Vy~~~~~~-g~~vavK~l~~~~~~~~~~~~E~~~l~~l~H~niv-~l~~~~~~~~~~~~lV~Ey~~~Gs 616 (766)
.+.|+.|-...+|+....+ +..+++|+-.......-.-.+|..+++.+...+++ ++++.+ . + ..||||++|.+
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~idR~~E~~vl~~L~~~gl~P~ll~~~-~--~--G~v~e~I~G~~ 187 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEIINREREKKISCILYNKNIAKKIYVFF-T--N--GRIEEFMDGYA 187 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCSCSCHHHHHHHHHHHTTSSSBCCEEEEE-T--T--EEEEECCCSEE
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhhhcCHHHHHHHHHHHHhcCCCCCEEEEe-C--C--eEEEEeeCCcc
Confidence 4678888889999998765 57888887643221111125799999999766664 455533 2 2 35999999755
Q ss_pred h
Q 004248 617 L 617 (766)
Q Consensus 617 L 617 (766)
|
T Consensus 188 l 188 (458)
T 2qg7_A 188 L 188 (458)
T ss_dssp C
T ss_pred C
Confidence 4
No 437
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.49 E-value=0.0019 Score=69.49 Aligned_cols=74 Identities=15% Similarity=0.178 Sum_probs=43.9
Q ss_pred cceeecCCcceEEEEEEcC---------CcEEEEEEeeccccCHHHHHHHHHHHhhcCCCCcc-cceeEEEecCCcEEEE
Q 004248 539 ANLIKNGHSGDLFRGILEG---------GIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLV-PLLGHCMERENEKFLV 608 (766)
Q Consensus 539 ~~~ig~G~~g~Vy~~~~~~---------g~~vavK~l~~~~~~~~~~~~E~~~l~~l~H~niv-~l~~~~~~~~~~~~lV 608 (766)
.+.++.|....+|+....+ +..+++|.-........+..+|.++++.+....++ ++++. . + -++|
T Consensus 38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~~~~~~~E~~~l~~L~~~g~~P~~~~~--~-~--~~~v 112 (369)
T 3c5i_A 38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDELYNTISEFEVYKTMSKYKIAPQLLNT--F-N--GGRI 112 (369)
T ss_dssp EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGGTSCHHHHHHHHHHHHHTTSSCCEEEE--E-T--TEEE
T ss_pred EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccceecHHHHHHHHHHHHhcCCCCceEEe--c-C--CcEE
Confidence 3567788888999988654 26788887643321111235788888888544444 55542 2 2 2789
Q ss_pred EeeCCCCCh
Q 004248 609 YKYMPNGDL 617 (766)
Q Consensus 609 ~Ey~~~GsL 617 (766)
|||++|..+
T Consensus 113 ~e~i~G~~l 121 (369)
T 3c5i_A 113 EEWLYGDPL 121 (369)
T ss_dssp EECCCSEEC
T ss_pred EEEecCCcC
Confidence 999997544
No 438
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.42 E-value=0.0072 Score=66.42 Aligned_cols=73 Identities=23% Similarity=0.211 Sum_probs=49.7
Q ss_pred cceeecCCcceEEEEEEcC--------CcEEEEEEeeccccCHHHHHHHHHHHhhcCCCCc-ccceeEEEecCCcEEEEE
Q 004248 539 ANLIKNGHSGDLFRGILEG--------GIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARL-VPLLGHCMERENEKFLVY 609 (766)
Q Consensus 539 ~~~ig~G~~g~Vy~~~~~~--------g~~vavK~l~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~~~~~~~~~~~~lV~ 609 (766)
.+.|+.|....||+....+ +..+++|+-... ...+.+.+|..+++.+...++ .++++.+ . + .+|+
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~-~~~~~li~E~~~l~~L~~~g~~P~l~~~~-~--~--g~v~ 151 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP-ETESHLVAESVIFTLLSERHLGPKLYGIF-S--G--GRLE 151 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC-CCHHHHHHHHHHHHHHHHTTSSSCEEEEE-T--T--EEEE
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC-CcHHHHHHHHHHHHHHHhCCCCCcEEEEe-C--C--CEEE
Confidence 4568888889999998653 478889887321 112567789999998854444 4555532 2 2 3899
Q ss_pred eeCCCCCh
Q 004248 610 KYMPNGDL 617 (766)
Q Consensus 610 Ey~~~GsL 617 (766)
||++|.++
T Consensus 152 e~l~G~~l 159 (429)
T 1nw1_A 152 EYIPSRPL 159 (429)
T ss_dssp CCCCEEEC
T ss_pred EEeCCccc
Confidence 99986444
No 439
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.34 E-value=0.0044 Score=55.89 Aligned_cols=37 Identities=22% Similarity=0.203 Sum_probs=25.1
Q ss_pred CCCEEEccCCCCCccCCcccCCCCCCcEEEeecCcCC
Q 004248 143 TLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLT 179 (766)
Q Consensus 143 ~L~~L~Ls~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~ 179 (766)
+|++|+|++|.|+...+..|..+++|++|+|++|.+.
T Consensus 32 ~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 32 DTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 5677777777777666666666677777777766553
No 440
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.19 E-value=0.0072 Score=54.45 Aligned_cols=33 Identities=27% Similarity=0.315 Sum_probs=13.2
Q ss_pred CCEEEccCCCCCCCCCcccCCCCCCCEEeccCC
Q 004248 192 LSVLDLSRNSLTGNIPTSFGLLKNLSSLDISSN 224 (766)
Q Consensus 192 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 224 (766)
|++|+|++|+|+...+..|..+++|+.|+|++|
T Consensus 33 l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 65 (130)
T 3rfe_A 33 TTELVLTGNNLTALPPGLLDALPALRTAHLGAN 65 (130)
T ss_dssp CSEEECTTSCCSSCCTTTGGGCTTCCEEECCSS
T ss_pred CCEEECCCCcCCccChhhhhhccccCEEEecCC
Confidence 344444444444333333333444444444443
No 441
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.15 E-value=0.00054 Score=66.39 Aligned_cols=7 Identities=29% Similarity=0.620 Sum_probs=0.0
Q ss_pred Cccceee
Q 004248 77 VWNGVRC 83 (766)
Q Consensus 77 ~W~gv~C 83 (766)
.|.+|..
T Consensus 6 ~~~~~~k 12 (197)
T 1pgv_A 6 TFNGIMQ 12 (197)
T ss_dssp -------
T ss_pred cccceec
Confidence 4666554
No 442
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.12 E-value=0.00063 Score=65.90 Aligned_cols=65 Identities=14% Similarity=0.246 Sum_probs=31.5
Q ss_pred CCCCCCcEEEeecC-cCCCC----CCccccCCCCCCEEEccCCCCCCC----CCcccCCCCCCCEEeccCCcCC
Q 004248 163 GNLTNLTSLYLSDN-GLTGT----IPSSLGQLSVLSVLDLSRNSLTGN----IPTSFGLLKNLSSLDISSNYLT 227 (766)
Q Consensus 163 ~~l~~L~~L~Ls~N-~l~~~----~p~~l~~L~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~ 227 (766)
.+-+.|++|+|++| .+... +-..+..-+.|+.|+|++|++... +...+..-+.|+.|+|++|.+.
T Consensus 38 ~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig 111 (197)
T 1pgv_A 38 EDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLT 111 (197)
T ss_dssp TTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCC
T ss_pred hcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCC
Confidence 44456666777664 54311 223344445566666666665421 1122223344555555555554
No 443
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.06 E-value=0.019 Score=60.88 Aligned_cols=31 Identities=16% Similarity=0.292 Sum_probs=27.3
Q ss_pred CCeEecCCCCCCeeeCCCCcEEeccchhhhh
Q 004248 659 LPFVHRDVQASSILLDDKFEVRLGSLSEVCA 689 (766)
Q Consensus 659 ~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~ 689 (766)
..++|+|+.+.||++++++.+.|.||+.+..
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 4789999999999999888899999987653
No 444
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=94.63 E-value=0.061 Score=58.10 Aligned_cols=143 Identities=21% Similarity=0.211 Sum_probs=81.2
Q ss_pred cceeecCCcceEEEEEEcC--------CcEEEEEEeeccc------------cCHH-------HHHHHHHHHhhcCCCCc
Q 004248 539 ANLIKNGHSGDLFRGILEG--------GIPVVIKRIDLQS------------VKTE-------AYLLELDFFSKVSHARL 591 (766)
Q Consensus 539 ~~~ig~G~~g~Vy~~~~~~--------g~~vavK~l~~~~------------~~~~-------~~~~E~~~l~~l~H~ni 591 (766)
.+.|..|-...+|+...++ ++.|.++.--... ..++ ....|.++++.+....+
T Consensus 57 v~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi 136 (401)
T 3f2s_A 57 ISVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSL 136 (401)
T ss_dssp EEEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTS
T ss_pred EEEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCC
Confidence 3567678888999988654 3678888763321 1111 23358999888864444
Q ss_pred c-cceeEEEecCCcEEEEEeeCCCCChhh--h---------------hhccCCCCCcCCCCC--HHHHHHHHHHHHH---
Q 004248 592 V-PLLGHCMERENEKFLVYKYMPNGDLSS--S---------------LYRKTNTEDDLQSLD--WITRLKIAIGAAE--- 648 (766)
Q Consensus 592 v-~l~~~~~~~~~~~~lV~Ey~~~GsL~~--~---------------l~~~~~~~~~~~~l~--~~~~~~i~~~ia~--- 648 (766)
. +++++ ++ . .+|+||++|-+|.. + +|..... ...... |.+..++..++..
T Consensus 137 ~Pkl~~~-~~-~---G~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~--~~~~~~~l~~~i~~~~~~l~~~~~ 209 (401)
T 3f2s_A 137 GPKLYGI-FP-Q---GRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMP--FNKEPKWLFGTMEKYLKEVLRIKF 209 (401)
T ss_dssp SCCEEEE-ET-T---EEEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCS--SCCSCCHHHHHHHHHHHHHHHCCC
T ss_pred CCeEEEE-eC-C---CeEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCC--CCCCcchHHHHHHHHHHHHHhccC
Confidence 4 45553 32 2 28999999755521 1 1111110 111223 3344444433211
Q ss_pred -------------------Hh----hhhcc-CCCCCeEecCCCCCCeeeCCC------CcEEeccchhhh
Q 004248 649 -------------------GL----SYLHH-ECTLPFVHRDVQASSILLDDK------FEVRLGSLSEVC 688 (766)
Q Consensus 649 -------------------gL----~yLH~-~~~~~iiHrDlKp~NILl~~~------~~~kl~DFG~a~ 688 (766)
-+ ++|.. .....++|+|+.+.||+++.+ +.+.+.||..|.
T Consensus 210 ~~~~~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 210 TEESRIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp CSHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred cchhhhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 11 12222 223467899999999999887 789999998765
No 445
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=93.52 E-value=0.22 Score=54.29 Aligned_cols=74 Identities=15% Similarity=0.149 Sum_probs=47.6
Q ss_pred cceeecCCcceEEEEEEcC--------CcEEEEEEeeccccCHHHHHHHHHHHhhcCCCCcc-cceeEEEecCCcEEEEE
Q 004248 539 ANLIKNGHSGDLFRGILEG--------GIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLV-PLLGHCMERENEKFLVY 609 (766)
Q Consensus 539 ~~~ig~G~~g~Vy~~~~~~--------g~~vavK~l~~~~~~~~~~~~E~~~l~~l~H~niv-~l~~~~~~~~~~~~lV~ 609 (766)
.+.+..|-...+|+....+ ++.+++|+-.......-+-.+|.++++.+.-..++ ++++ .. . -+.||
T Consensus 75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~~idR~~E~~~l~~L~~~gi~P~l~~--~~-~--~~~I~ 149 (424)
T 3mes_A 75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGKFYDSKVELDVFRYLSNINIAPNIIA--DF-P--EGRIE 149 (424)
T ss_dssp EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-CCCCHHHHHHHHHHHHHTTSSCCEEE--EE-T--TEEEE
T ss_pred EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcchhcCHHHHHHHHHHHHhcCCCCCEEE--Ec-C--CCEEE
Confidence 4567778888999998653 57899988643221111235788888888533444 4443 22 2 27899
Q ss_pred eeCCCCCh
Q 004248 610 KYMPNGDL 617 (766)
Q Consensus 610 Ey~~~GsL 617 (766)
||++|.+|
T Consensus 150 efI~G~~l 157 (424)
T 3mes_A 150 EFIDGEPL 157 (424)
T ss_dssp ECCCSEEC
T ss_pred EEeCCccC
Confidence 99998654
No 446
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=89.43 E-value=0.34 Score=47.19 Aligned_cols=99 Identities=14% Similarity=-0.030 Sum_probs=63.1
Q ss_pred CChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecCCCCCCeeeCCCCcEEeccchhhhhcCCCC
Q 004248 615 GDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDA 694 (766)
Q Consensus 615 GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG~a~~~~~~~ 694 (766)
-+|.++|...+ .++++++.+.++.|.+++|.-+-.+.. + ..+=+-|..|++..+|.+...+ ..+.
T Consensus 33 vSL~eIL~~~~------~PlsEEqaWALc~Qc~~~L~~~~~~~~-~-~~~i~~~~~i~l~~dG~V~f~~-~~s~------ 97 (229)
T 2yle_A 33 LSLEEILRLYN------QPINEEQAWAVCYQCCGSLRAAARRRQ-P-RHRVRSAAQIRVWRDGAVTLAP-AADD------ 97 (229)
T ss_dssp EEHHHHHHHHT------SCCCHHHHHHHHHHHHHHHHHHHHTTC-C-CCCCCSGGGEEEETTSCEEECC-C---------
T ss_pred ccHHHHHHHcC------CCcCHHHHHHHHHHHHHHHHhhhhccc-C-CceecCCcceEEecCCceeccc-cccc------
Confidence 37889997654 469999999999999999876611100 1 1222346889999999988874 2211
Q ss_pred ccceeeecccCCCCCCCCceeeeeeeeecccccceecchHHHHHHhc
Q 004248 695 HQSRITRLLRLPQSSEQGSSGMVIYLFIIFTIFHIYFHGNPLFSAIF 741 (766)
Q Consensus 695 ~~~~~t~~y~aPe~~~~~~~g~~~~~~~~~~~~Dv~s~Gvvl~ellt 741 (766)
.....+.+||..... .+++.=|||+|+++|..+-
T Consensus 98 ---~~~~~~~~pe~~~~~----------~te~~~IysLG~tLY~ALD 131 (229)
T 2yle_A 98 ---AGEPPPVAGKLGYSQ----------CMETEVIESLGIIIYKALD 131 (229)
T ss_dssp ------------CCSSSS----------SCHHHHHHHHHHHHHHHHT
T ss_pred ---ccccCCCChhhcccc----------chHHHHHHHHHHHHHHHhh
Confidence 112345677765311 4689999999999998775
No 447
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=86.55 E-value=0.096 Score=57.92 Aligned_cols=58 Identities=9% Similarity=0.017 Sum_probs=17.5
Q ss_pred cceeecCCcceEEEEEEcC-CcEEEE------EEeeccccC---HHHHHHHHHHHhhcCCCCcccceeEEE
Q 004248 539 ANLIKNGHSGDLFRGILEG-GIPVVI------KRIDLQSVK---TEAYLLELDFFSKVSHARLVPLLGHCM 599 (766)
Q Consensus 539 ~~~ig~G~~g~Vy~~~~~~-g~~vav------K~l~~~~~~---~~~~~~E~~~l~~l~H~niv~l~~~~~ 599 (766)
.+.+| ||.||+|.+.. ..+||| |........ .+.|.+|..++++.+|||+++.+++..
T Consensus 147 ~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 147 YEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp TTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEE
T ss_pred cccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence 45566 99999999754 468999 766543322 346899999999999999999998754
No 448
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=84.91 E-value=1.5 Score=47.19 Aligned_cols=28 Identities=32% Similarity=0.450 Sum_probs=23.8
Q ss_pred eEecCCCCCCeee------CCCCcEEeccchhhh
Q 004248 661 FVHRDVQASSILL------DDKFEVRLGSLSEVC 688 (766)
Q Consensus 661 iiHrDlKp~NILl------~~~~~~kl~DFG~a~ 688 (766)
++|.|+.+.||++ +++..+++.||-.|.
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~ 279 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhcc
Confidence 5699999999999 456779999998775
No 449
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=78.14 E-value=6.4 Score=38.06 Aligned_cols=86 Identities=5% Similarity=-0.082 Sum_probs=61.0
Q ss_pred cCCCCcccceeEEEecCCcEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCCCCeEecC
Q 004248 586 VSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRD 665 (766)
Q Consensus 586 l~H~niv~l~~~~~~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrD 665 (766)
-.||+.++. . ....++.+.+.|+.-+ +..++-. ...++...+++++..|+...++++.. +|==
T Consensus 42 ~~~~~Fl~~-~-I~e~eD~v~~~y~~~~--~~~~f~~--------ik~~~~~eKlr~l~ni~~l~~~~~~r-----~tf~ 104 (215)
T 4ann_A 42 QHSPYFIDA-E-LTELRDSFQIHYDIND--NHTPFDN--------IKSFTKNEKLRYLLNIKNLEEVNRTR-----YTFV 104 (215)
T ss_dssp SCCTTBCCE-E-EEECSSEEEEEECCCT--TSEEGGG--------GGGSCHHHHHHHHHHGGGGGGGGGSS-----EECC
T ss_pred ccCCcccce-E-EEEcccEEEEEEEcCc--ccCCHHH--------HHhcCHHHHHHHHHHHHHHHHHhcCc-----eEEE
Confidence 468888875 3 2333455555555443 3332221 12378899999999999988888754 7888
Q ss_pred CCCCCeeeCCCCcEEeccchhhh
Q 004248 666 VQASSILLDDKFEVRLGSLSEVC 688 (766)
Q Consensus 666 lKp~NILl~~~~~~kl~DFG~a~ 688 (766)
+.|+||.+|.++.+++.-.|+..
T Consensus 105 L~P~NL~f~~~~~p~i~~RGik~ 127 (215)
T 4ann_A 105 LAPDELFFTRDGLPIAKTRGLQN 127 (215)
T ss_dssp CSGGGEEECTTSCEEESCCEETT
T ss_pred EecceEEEcCCCCEEEEEccCcc
Confidence 99999999999999999888743
No 450
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=75.84 E-value=8.7 Score=37.25 Aligned_cols=85 Identities=11% Similarity=-0.012 Sum_probs=60.5
Q ss_pred cCCCCcccceeEEEecCCcEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhh-hhccCCCCCeEec
Q 004248 586 VSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLS-YLHHECTLPFVHR 664 (766)
Q Consensus 586 l~H~niv~l~~~~~~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~-yLH~~~~~~iiHr 664 (766)
-.||+. .. . ....++.+.+.|+--+++.=+..++ .++...+++++..++.... +++.. +|=
T Consensus 47 ~~~~~f-~~-~-I~~~eD~~~i~y~~~~~~~~f~~i~----------~~~~~eKlrll~nl~~L~~~~~~~r-----~tf 108 (219)
T 4ano_A 47 EVDPCI-VR-D-IDVSEDEVKVVIKPPSSFLTFAAIR----------KTTLLSRIRAAIHLVSKVKHHSARR-----LIF 108 (219)
T ss_dssp GSCSSS-EE-E-EEECSSEEEEEEECCTTCEEHHHHH----------TSCHHHHHHHHHHHHHHHSSCCSSS-----EEC
T ss_pred ccCCCC-Ce-E-EEEeCCEEEEEEEcCcccCcHHHHH----------hcCHHHHHHHHHHHHHHHHHhhhCc-----eeE
Confidence 367877 32 2 2233556666666554433333342 3788999999999999888 77754 677
Q ss_pred CCCCCCeeeCCCCcEEeccchhhh
Q 004248 665 DVQASSILLDDKFEVRLGSLSEVC 688 (766)
Q Consensus 665 DlKp~NILl~~~~~~kl~DFG~a~ 688 (766)
-+.|+||++|.++.+++.-.|+-.
T Consensus 109 ~l~P~NL~f~~~~~p~i~hRGi~~ 132 (219)
T 4ano_A 109 IVCPENLMFNRALEPFFLHVGVKE 132 (219)
T ss_dssp CCCGGGEEECTTCCEEESCCEETT
T ss_pred EEeCceEEEeCCCcEEEEEcCCcc
Confidence 899999999999999999888743
No 451
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=72.01 E-value=1.1 Score=31.35 Aligned_cols=17 Identities=29% Similarity=0.667 Sum_probs=7.6
Q ss_pred EEeeeehhhHHHHHHHH
Q 004248 462 VLSAVLGGFGLIVLLVL 478 (766)
Q Consensus 462 ii~~vv~~~~~lv~~~~ 478 (766)
+.+.|+++++++++++.
T Consensus 12 IA~gVVgGv~~v~ii~~ 28 (44)
T 2l2t_A 12 IAAGVIGGLFILVIVGL 28 (44)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred EEEeehHHHHHHHHHHH
Confidence 34445554444444433
No 452
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=71.71 E-value=1.5 Score=30.73 Aligned_cols=16 Identities=13% Similarity=0.507 Sum_probs=7.1
Q ss_pred EEeeeehhhHHHHHHH
Q 004248 462 VLSAVLGGFGLIVLLV 477 (766)
Q Consensus 462 ii~~vv~~~~~lv~~~ 477 (766)
+.++|+++++++++++
T Consensus 13 IA~gVVgGv~~~~ii~ 28 (44)
T 2ks1_B 13 IATGMVGALLLLLVVA 28 (44)
T ss_dssp STHHHHHHHHHHHHHH
T ss_pred EEeehhHHHHHHHHHH
Confidence 3344555444444333
No 453
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=27.21 E-value=2.5e+02 Score=31.49 Aligned_cols=76 Identities=9% Similarity=0.069 Sum_probs=48.0
Q ss_pred EEEEeeCCCCChhhhhh----------ccCCCCCcCCCCCHHHHHHHHHHHHH--HhhhhccCCCCCeEecCCCCCCeee
Q 004248 606 FLVYKYMPNGDLSSSLY----------RKTNTEDDLQSLDWITRLKIAIGAAE--GLSYLHHECTLPFVHRDVQASSILL 673 (766)
Q Consensus 606 ~lV~Ey~~~GsL~~~l~----------~~~~~~~~~~~l~~~~~~~i~~~ia~--gL~yLH~~~~~~iiHrDlKp~NILl 673 (766)
.=+.|++++-++.+.+. +............|..+..++...|- -+.|+=. | +|=.++||||
T Consensus 414 ~GlIE~V~~~tl~~il~~~~~l~~~f~~~~~~~~~~~~~~~~a~~nF~~S~A~ySvv~YILG-----i--gDRH~~NILl 486 (614)
T 3ls8_A 414 HGFMQFIQSVPVAEVLDTEGSIQNFFRKYAPSENGPNGISAEVMDTYVKSCAGYCVITYILG-----V--GDRHLDNLLL 486 (614)
T ss_dssp EEEEECCCCEEHHHHHHHTSSHHHHHHHHSBCTTSGGGBCHHHHHHHHHHHHHHHHHHHHHT-----C--CCCCTTSEEE
T ss_pred CceEEEeCCccHHHHHHccChHHHHHHHhCCCccccccccHHHHHHHHHHHHHHhHhheeee-----c--cCCCCcceeE
Confidence 33567887655555443 22111111112346777777776553 4667653 2 5778899999
Q ss_pred CCCCcEEeccchhhh
Q 004248 674 DDKFEVRLGSLSEVC 688 (766)
Q Consensus 674 ~~~~~~kl~DFG~a~ 688 (766)
|.+|++-=+|||.+-
T Consensus 487 d~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 487 TKTGKLFHIDFGYIL 501 (614)
T ss_dssp CTTSCEEECCCSSCT
T ss_pred cCCCCEeeeehHHhh
Confidence 999999999999874
No 454
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=26.74 E-value=44 Score=23.32 Aligned_cols=26 Identities=23% Similarity=0.355 Sum_probs=10.3
Q ss_pred eeeehhhHH-HHHHHHHHHHHHhhccc
Q 004248 464 SAVLGGFGL-IVLLVLLALLALCFCKK 489 (766)
Q Consensus 464 ~~vv~~~~~-lv~~~~l~~~~~~~~~~ 489 (766)
.++.++++. +++++++++.++++.||
T Consensus 11 ~~IA~gVVgGv~~~~ii~~~~~~~~RR 37 (44)
T 2ks1_B 11 PSIATGMVGALLLLLVVALGIGLFMRR 37 (44)
T ss_dssp SSSTHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ceEEeehhHHHHHHHHHHHHHHHHhhh
Confidence 444333333 33334445444444333
No 455
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=26.10 E-value=1.9e+02 Score=29.74 Aligned_cols=139 Identities=13% Similarity=0.120 Sum_probs=68.1
Q ss_pred ceeecCCcceEEEEEEcCCcEEEEEEeeccccCHHHHHHHHHHHhhcCCCCcccceeEE--------------E------
Q 004248 540 NLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHC--------------M------ 599 (766)
Q Consensus 540 ~~ig~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~--------------~------ 599 (766)
+..-.|.. -||.+.. ++..|+||-. .....|-|-.++...-.+.-|+. +++.+. .
T Consensus 75 ~~s~~Gst-gvff~~t-d~~~~VVK~s--~~l~~E~l~s~LA~~LGlpiP~~-Riv~~~~~E~~e~~~~L~~~~~~~~~l 149 (342)
T 1cja_A 75 ERSEKGTE-GLFFVET-ESGVFIVKRS--TNIESETFCSLLCMRLGLHAPKV-RVVSSNSEEGTNMLECLAAIDKSFRVI 149 (342)
T ss_dssp EECCSTTS-CEEEEEE-SSCEEEEECC--TTHHHHHHHHHHHHHHTCCCCCE-EEEESSSHHHHHHHHHHHHHCSSSCHH
T ss_pred EeccCCCC-CeEEEEe-CCCEEEEeCc--HHHHHHHHHHHHHHHhCCCCCCe-eEEeeCcHHHHHHHHHHHHhhhhhHHH
Confidence 44455554 4555544 4778999954 22234444445444444554442 111100 0
Q ss_pred --ecCCcEEEEEeeCCCCChhhhhhccCCCCCcCCCCCHHHHHHHHHHHHHHhhhhccCCC-CCeEe-cCCCCCCeeeCC
Q 004248 600 --ERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECT-LPFVH-RDVQASSILLDD 675 (766)
Q Consensus 600 --~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~-~~iiH-rDlKp~NILl~~ 675 (766)
..++..+++|||.+|-.|.+.=+..- ...+..+... ..+-+-++++...+.. .+.+. .---++|||+++
T Consensus 150 ~~l~~~~~~l~meyv~G~~L~e~~~~~~-----~~~f~~~~~k--~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~ 222 (342)
T 1cja_A 150 TTLANQANILLMELVRGITLNKLTTTSA-----PEVLTKSTMQ--QLGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSE 222 (342)
T ss_dssp HHHTTCSEEEEEECCCEEESTTCCSSSH-----HHHSCHHHHH--HHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEES
T ss_pred HHhhcccceehhhhcCCCccccchhhhh-----hhhcCHHHHH--hhchhheehhhhcCCccCcccccCCCChhheEEeC
Confidence 00224679999999755544221100 0012222211 1122344555554321 22222 235789999987
Q ss_pred CCc-EEeccchhhhhc
Q 004248 676 KFE-VRLGSLSEVCAQ 690 (766)
Q Consensus 676 ~~~-~kl~DFG~a~~~ 690 (766)
+.. +.+.|-+.+...
T Consensus 223 ~n~~~~~IDhn~af~~ 238 (342)
T 1cja_A 223 RGATVVPIDSKIIPLD 238 (342)
T ss_dssp BTTCEEECSCCCCCCC
T ss_pred CCCeEEEEcCCccccC
Confidence 554 888999888543
No 456
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=23.86 E-value=25 Score=25.66 Aligned_cols=10 Identities=20% Similarity=0.421 Sum_probs=3.9
Q ss_pred eeeehhhHHH
Q 004248 464 SAVLGGFGLI 473 (766)
Q Consensus 464 ~~vv~~~~~l 473 (766)
.++++++.++
T Consensus 14 ~svl~GLLLL 23 (54)
T 2l8s_A 14 LSAFAGLLLL 23 (54)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3344444333
Done!