Your job contains 1 sequence.
>004249
MEDEECLEYEALAERKRKAALQNHNDCTEGEAKKKKMAMESQDNDDERRRFEAIIFGFGS
RKRSREASKKYPSLKKRGRPEGSKKKVCPEIRRMLGDASLHYALGRYEEAISVLHEVIRL
EEELPNSYHILGLVHDALGNTAKAMGCYWLAACYKQKDSSLWKLIFPWLIEQGDTTWAMS
CLSEAVKADPNDFKLKFHLASLYVELGNFQRAADVYRQMVQLCPENIEALKMGAKLYQKS
GQIESSVDILEDYLKGHPTEADFGVIDLLASMLVQMNAYDRVLKHIELVDLVYYSGKELL
LALKIKAGICHIQLGNTDKAEILLTAIHWENVSDHAESINEIADLFKNRELYSTALKYYH
MLEANAGVHNDGCLHLKIAECSLALKEREKSIIYFYKALQILEDNIDARLTLASLLLEDA
KDEEAISLLTPPMSLENKYVNSDKTHAWWLNIRIKIKLCRIYKAKGMIEGFVDMLLPLVC
ESSHQEETFNHEEHRLLIIDLCKTLASLHRYEDAIKIINLILKLGYGKFPVEKEELYFLG
AQIPCNTTDPKLWFDGVRFMVKLHPHRLTTWNRYYKLVSRFEKIFSKHAKLLRNVRAKYR
DFVPPIIISGHQFTMISHHQDAAREYLEAYKLLPENPLINLCVGTALINLALGVRLQNKH
QCVAQGLAFLYNNLRLAENSQEALYNIARAYHHVGLVSLAASYYEKVLAMYQKDCIIPGF
PDHMEDWKPGHSDLRREAAYNLHLIYKKSGAVDLARQVLRDHCTF
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 004249
(765 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2007928 - symbol:AT1G17680 species:3702 "Arabi... 959 7.8e-183 3
UNIPROTKB|I3LAX1 - symbol:GTF3C3 "Uncharacterized protein... 295 2.1e-49 3
DICTYBASE|DDB_G0278321 - symbol:gtf3C3 "transcription fac... 352 2.1e-48 2
UNIPROTKB|F1NEE6 - symbol:GTF3C3 "Uncharacterized protein... 280 1.1e-43 3
RGD|1309185 - symbol:Gtf3c3 "general transcription factor... 291 3.4e-39 2
UNIPROTKB|E1BPR9 - symbol:GTF3C3 "Uncharacterized protein... 274 6.0e-38 2
UNIPROTKB|E2QYG3 - symbol:GTF3C3 "Uncharacterized protein... 282 1.3e-37 3
UNIPROTKB|Q9Y5Q9 - symbol:GTF3C3 "General transcription f... 272 6.9e-37 2
POMBASE|SPCC16C4.14c - symbol:sfc4 "transcription factor ... 206 2.2e-27 3
ZFIN|ZDB-GENE-040914-80 - symbol:gtf3c3 "general transcri... 293 3.5e-26 2
ASPGD|ASPL0000055827 - symbol:AN0407 species:162425 "Emer... 188 7.3e-24 3
CGD|CAL0004061 - symbol:TFC4 species:5476 "Candida albica... 184 3.7e-23 3
UNIPROTKB|G4N851 - symbol:MGG_06314 "Uncharacterized prot... 159 2.5e-20 3
SGD|S000003279 - symbol:TFC4 "Subunit of TFIIIC RNA pol I... 157 3.2e-19 4
WB|WBGene00014114 - symbol:tftc-3 species:6239 "Caenorhab... 189 4.5e-18 3
UNIPROTKB|Q233J3 - symbol:TTHERM_00391570 "DNA polymerase... 179 2.5e-09 1
MGI|MGI:2143311 - symbol:Bbs4 "Bardet-Biedl syndrome 4 (h... 131 1.1e-06 2
UNIPROTKB|Q74D87 - symbol:GSU1432 "TPR domain protein" sp... 147 1.2e-06 1
TIGR_CMR|GSU_1432 - symbol:GSU_1432 "TPR domain protein" ... 147 1.2e-06 1
UNIPROTKB|Q96RK4 - symbol:BBS4 "Bardet-Biedl syndrome 4 p... 135 1.7e-06 2
UNIPROTKB|Q74DZ8 - symbol:GSU1166 "TPR domain protein" sp... 137 3.1e-06 1
TIGR_CMR|GSU_1166 - symbol:GSU_1166 "TPR domain protein" ... 137 3.1e-06 1
RGD|1309134 - symbol:Bbs4 "Bardet-Biedl syndrome 4" speci... 125 7.8e-06 2
UNIPROTKB|Q747S4 - symbol:GSU3191 "TPR domain protein" sp... 140 8.2e-06 1
TIGR_CMR|GSU_3191 - symbol:GSU_3191 "TPR domain protein" ... 140 8.2e-06 1
DICTYBASE|DDB_G0286251 - symbol:dnajc3 "TPR repeat-contai... 109 2.2e-05 2
TAIR|locus:2103025 - symbol:SEC "secret agent" species:37... 132 2.9e-05 2
UNIPROTKB|F1SI91 - symbol:BBS4 "Uncharacterized protein" ... 119 0.00011 2
TAIR|locus:2080722 - symbol:SPY "SPINDLY" species:3702 "A... 93 0.00012 3
UNIPROTKB|Q1JQ97 - symbol:BBS4 "Bardet-Biedl syndrome 4 p... 118 0.00014 2
TIGR_CMR|GSU_3023 - symbol:GSU_3023 "glycosyl transferase... 133 0.00023 1
UNIPROTKB|Q81SV4 - symbol:BAS1429 "TPR domain protein" sp... 121 0.00050 1
TIGR_CMR|BA_1541 - symbol:BA_1541 "TPR domain protein" sp... 121 0.00050 1
>TAIR|locus:2007928 [details] [associations]
symbol:AT1G17680 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0000278 "mitotic cell
cycle" evidence=RCA] [GO:0000956 "nuclear-transcribed mRNA
catabolic process" evidence=RCA] [GO:0006396 "RNA processing"
evidence=RCA] [GO:0006944 "cellular membrane fusion" evidence=RCA]
[GO:0009410 "response to xenobiotic stimulus" evidence=RCA]
[GO:0016192 "vesicle-mediated transport" evidence=RCA] [GO:0048522
"positive regulation of cellular process" evidence=RCA] [GO:0048573
"photoperiodism, flowering" evidence=RCA] InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF13181 PROSITE:PS50293
SMART:SM00028 EMBL:CP002684 Gene3D:1.25.40.10 KO:K15201 OMA:ASILEDH
EMBL:BT002323 IPI:IPI00526440 RefSeq:NP_173210.3 RefSeq:NP_850945.1
UniGene:At.16020 ProteinModelPortal:Q8GUP0 SMR:Q8GUP0 STRING:Q8GUP0
PRIDE:Q8GUP0 EnsemblPlants:AT1G17680.1 EnsemblPlants:AT1G17680.2
GeneID:838344 KEGG:ath:AT1G17680 TAIR:At1g17680
HOGENOM:HOG000029453 InParanoid:Q8GUP0 PhylomeDB:Q8GUP0
ProtClustDB:CLSN2679985 ArrayExpress:Q8GUP0 Genevestigator:Q8GUP0
Uniprot:Q8GUP0
Length = 896
Score = 959 (342.6 bits), Expect = 7.8e-183, Sum P(3) = 7.8e-183
Identities = 189/322 (58%), Positives = 236/322 (73%)
Query: 449 WLNIRIKIKLCRIYKAKGMIEGFVDMLLPLVCESSHQEETFNHEEHRLLIIDLCKTLASL 508
W IR + R + + I+ + VC S +EE EE+ L +DLCK LASL
Sbjct: 580 WRKIRATLNETRRIRERAAIKAHNED----VCSES-EEEVIKDEEYHRLFVDLCKALASL 634
Query: 509 HRYEDAIKIINLILKLGYGKFPVE-KEELYFLGAQIPCNTTDPKLWFDGVRFMVKLHPHR 567
RY +A++I+NL +L PVE K+EL LGA+I C+T DPK WFD VR +++ HP+R
Sbjct: 635 QRYWEALEIVNLARRLDAKMLPVETKKELQSLGAKISCDTMDPKQWFDCVRSVIQQHPYR 694
Query: 568 LTTWNRYYKLVSRFEKIFSKHAKLLRNVRAKYRDFVPPIIISGHQFTMISHHQDAAREYL 627
L WN YY ++SR K S AK + ++R+KYRD VPPI+I+GH FT+ S HQDAAREYL
Sbjct: 695 LNAWNCYYSVISRLGKRASTEAKFMHHLRSKYRDCVPPILIAGHHFTVTSRHQDAAREYL 754
Query: 628 EAYKLLPENPLINLCVGTALINLALGVRLQNKHQCVAQGLAFLYNNLRLAENSQEALYNI 687
EAYKL+PE+PLINLCVG ALINLALG RL+N+H+C+AQG AFLYNNLR+ NSQEALYN+
Sbjct: 755 EAYKLMPESPLINLCVGAALINLALGFRLKNRHECLAQGFAFLYNNLRICSNSQEALYNV 814
Query: 688 ARAYHHVGLVSLAASYYEKVLAMYQKDCIIPGFPDH----MEDWKPGHSDLRREAAYNLH 743
ARAY HVGLV+LAASYYEKVLA+Y+KD +P P+ E+ KP + DLR+EAA+NLH
Sbjct: 815 ARAYQHVGLVTLAASYYEKVLAIYEKDYTMPKLPNEDPIVAEERKPVNCDLRKEAAHNLH 874
Query: 744 LIYKKSGAVDLARQVLRDHCTF 765
LIYK SGA DLARQVL+DHCTF
Sbjct: 875 LIYKHSGAFDLARQVLKDHCTF 896
Score = 793 (284.2 bits), Expect = 7.8e-183, Sum P(3) = 7.8e-183
Identities = 176/423 (41%), Positives = 265/423 (62%)
Query: 58 FGSRKRSREASKKYPSLKKRGRPEGSKKKVCPEIRRMLGDASLHYALGRYEEAISVLHEV 117
F S R R+ S+KY KK+GR GSKK+V P+I + +A +A GR EA+ +L EV
Sbjct: 123 FMSSGRRRK-SRKY---KKKGRRPGSKKEVAPDILKRFREALFLHAHGRDIEALPILVEV 178
Query: 118 IRLEEELPNSYHILGLVHDALGNT-AKAMGCYWLAACYKQKDSSLWKLIFPWLIEQGDTT 176
I+ +Y+ L V + LG T + + +AA K S WKL++ EQ + +
Sbjct: 179 IKQAPAFDIAYYYLSRVSEQLGKTESSSTEALKIAANIKGSKSPFWKLLYERFKEQENIS 238
Query: 177 WAMSCLSEAVKADPNDFKLKFHLASLYVELGNFQRAADVYRQMVQLCPENIEALKMGAKL 236
A S S+A++ADP+D LK+ A + + G ++ AA+ + Q+ + CPE IEALK G +
Sbjct: 239 VARSYASKAIQADPDDIPLKYEYADICLNTGKYREAAETFEQIFRRCPERIEALKWGVQY 298
Query: 237 YQKSGQIESSVDILEDYLKGHPTEADFGVIDLLASMLVQMNAYDRVLKHIELVDLVYYSG 296
+ KSG+ E + ILED++K H +E V+DLLAS+ +++NA+DR LK+I V +Y G
Sbjct: 299 FLKSGEGERAASILEDHIKSHSSEVGHDVLDLLASVFMKINAHDRALKYIHDVRQIYNVG 358
Query: 297 KELLLALKIKAGICHIQLGNTDKAEILLTAIHWENVSDHAESINEIADLFKNRELYSTAL 356
KEL +LKI+ ICH+ L ++AE +L+ + E VS+H E I +AD N + +AL
Sbjct: 359 KELSSSLKIRQAICHVHLEEMEQAESVLSILPQEAVSEHPELITNLADELTNIGNFHSAL 418
Query: 357 KYYHMLEANAGVHNDGCLHLKIAECSLALKEREKSIIYFYKALQILEDNIDARLTLASLL 416
KYY +EA + N G L +KIA C ++L+ER+++I+++YKAL L D +D R+TLASLL
Sbjct: 419 KYY--IEAISEPVN-GNLFVKIARCYMSLEERKQAIVFYYKALNELSDTVDVRITLASLL 475
Query: 417 LEDAKDEEAISLLTPPMSLENKYVNSDKTHAWWLNIRIKIKLCRIYKAKGMIEGFVDMLL 476
LED K +EA+ +L+PP EN ++ K AWW N +I++ LC+IY ++GM+E F + L
Sbjct: 476 LEDGKRDEAVLVLSPP---ENPDPDTAKLKAWWKNRKIRMNLCQIYHSEGMLEDFANTAL 532
Query: 477 PLV 479
LV
Sbjct: 533 QLV 535
Score = 60 (26.2 bits), Expect = 7.8e-183, Sum P(3) = 7.8e-183
Identities = 24/74 (32%), Positives = 30/74 (40%)
Query: 8 EYEALAERKRKAALQNHNDCTEGXXXXXXXXXXSQDNDDERRRFEAIIFGFGSRKRSREA 67
EYEALAERKRKA + + + + RRR +K R
Sbjct: 88 EYEALAERKRKALADSQRNPSNISNSTSGVEGFMEFMSSGRRRKSRKY----KKKGRRPG 143
Query: 68 SKKY--PSLKKRGR 79
SKK P + KR R
Sbjct: 144 SKKEVAPDILKRFR 157
>UNIPROTKB|I3LAX1 [details] [associations]
symbol:GTF3C3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0000127 "transcription factor TFIIIC complex"
evidence=IEA] InterPro:IPR001440 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF00515 Pfam:PF13181
PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028 Gene3D:1.25.40.10
GO:GO:0000127 OMA:IHLAIHY GeneTree:ENSGT00390000016929
EMBL:CU466965 Ensembl:ENSSSCT00000031776 Uniprot:I3LAX1
Length = 916
Score = 295 (108.9 bits), Expect = 2.1e-49, Sum P(3) = 2.1e-49
Identities = 72/269 (26%), Positives = 136/269 (50%)
Query: 497 LIIDLCKTLASLHRYEDAIKIINLILKL-GYGKFPVEKEELYFLGAQIPCNTTDPKLWFD 555
L++ +L L R+++A +++ L+ + + +++EL + G + ++
Sbjct: 658 LLLKAIYSLCDLSRFQEAELLVDSSLEYYSFYEDRQKRKELEYFGLSAAILDKNFGKAYN 717
Query: 556 GVRFMVKLHPHRLTTWNRYYKLVSRFEKIFSKHAKLLRNVRAKYRDFVPPIIISGHQFTM 615
+R MV H ++ WN + ++ + + +H + + K D +++GH +
Sbjct: 718 YIRLMVMEHVNKPQLWNIFNQITMHSQDV--RHHRFCLRLMLKNPDSHALCVLNGHNAFV 775
Query: 616 ISHHQDAAREYLEAYKLLPENPLINLCVGTALINLALGVRLQNKHQCVAQGLAFLYNNLR 675
+ A +Y++A++ P PL +LC+G I++A + +H V QG +FL L
Sbjct: 776 SGSFKHALGQYVQAFRTYPHEPLYSLCIGLTFIHMASQKYVLRRHALVVQGFSFLNRYLS 835
Query: 676 LAENSQEALYNIARAYHHVGLVSLAASYYEKVLAMYQKDCIIPGFPDHMEDWKPGHSDLR 735
+ QE+ YN+ R H +GLV LA YY+K L + P P +E + DLR
Sbjct: 836 IRGPCQESFYNLGRGLHQLGLVHLAIHYYQKALEL-------P--PLEIEGIEVDQLDLR 886
Query: 736 REAAYNLHLIYKKSGAVDLARQVLRDHCT 764
R+ AYNL LIY+ SG + +A+++L +C+
Sbjct: 887 RDIAYNLSLIYQSSGNIGMAQKLLYTYCS 915
Score = 230 (86.0 bits), Expect = 2.1e-49, Sum P(3) = 2.1e-49
Identities = 58/276 (21%), Positives = 132/276 (47%)
Query: 75 KKRGRPEGSKKKVCPEIRRMLGDASLHYALGRYEEAISVLHEVIRLEEELPNSYHILGLV 134
KK + + + K+ +R ++G+A++ +A G EEAI + E+IR + L ++
Sbjct: 129 KKMMKEKRPRSKLPRALRGLMGEANIRFARGEREEAILMCMEIIRQAPLAYEPFSTLAMI 188
Query: 135 HDALGNTAKAMGCYWLAACYKQKDSSLWKLIFPWLIEQGDTTWAMSCLSEAVKADPNDFK 194
++ G+ K++ +AA D+ W + +EQ + A+ C ++A+K +P + +
Sbjct: 189 YEDQGDMEKSLQFELIAAHLNPSDTEEWVRLAEMSLEQDNIKQAIFCYTKALKYEPTNVR 248
Query: 195 LKFHLASLYVELGNFQRAADVYRQMVQL-CPEN----IEALKMGAKLYQKSGQIESSVDI 249
+ +SLY ++G+ + A D YR+++ L P + ++ + AK Y ++ + S++++
Sbjct: 249 YLWERSSLYEQMGDHKMAMDGYRRILNLLAPSDGDRFMQLARDMAKSYYEASDVISAINV 308
Query: 250 LEDYLKGHPTEADFGVIDLLASMLVQMNAYDRVLKHIELVDLVYYSGKELLLALKIKAGI 309
+E+ HP +++ + + YD+ L+ I + + + G
Sbjct: 309 IEEAFSKHPGLVSMEDVNIAGELYISNKQYDKALEVIADFSGIVLEKRSTEEGTEENTGC 368
Query: 310 CHIQLGNTD-KAEILLTAIHWENVSDHAESINEIAD 344
+++G + K I+ T W V + + + + D
Sbjct: 369 SFLRIGIWERKGRIIATRGRWNEVHEPSTRVGQTDD 404
Score = 124 (48.7 bits), Expect = 2.1e-49, Sum P(3) = 2.1e-49
Identities = 39/177 (22%), Positives = 86/177 (48%)
Query: 303 LKIKAGICHIQLGNTDKAEILLTAIHWENVSDHAESINEIADLFKNRELYSTALKYYHML 362
+ +K +C + L + LLT + +N D + ++A+ F + Y++AL L
Sbjct: 418 ITVKLMVCLVHLNILEPLNPLLTTLVEQNPEDMGDLYLDVAEAFLDVGEYNSALPLLSAL 477
Query: 363 EANAGVHNDGCLHLKIAECSLALKEREKSIIYFYKALQILEDNIDARLTLASLLLEDAKD 422
+ +N + L+ AEC AL E++ + K + + ++DAR++L++L + +
Sbjct: 478 VCSER-YNLAVVWLRHAECLKALGYMERAAESYGKVVDLAPLHLDARISLSTLQQQLGRP 536
Query: 423 EEAISLLTPPMSLENKYVNSDKTHAWWLNIRIKIKLCRIYKAKGMIEGFVDMLLPLV 479
E+A+ L P + + +A +++ + + ++G + G+VD LL ++
Sbjct: 537 EKALEALEPMYDPDTL---AQDANAAQQELKLLLHRSTLLFSQGKMYGYVDTLLTML 590
Score = 76 (31.8 bits), Expect = 4.0e-25, Sum P(2) = 4.0e-25
Identities = 36/169 (21%), Positives = 72/169 (42%)
Query: 170 IEQGDTTWAMSCLSEAVKADPNDFKLKF--HLASLYVELGNFQRAADVYRQMVQLCPENI 227
++ G+ A+ LS V ++ + + + H L LG +RAA+ Y ++V L P ++
Sbjct: 462 LDVGEYNSALPLLSALVCSERYNLAVVWLRHAECLKA-LGYMERAAESYGKVVDLAPLHL 520
Query: 228 EALKMGAKLYQKSGQIESSVDILEDYLKGHPTEADFGVIDLLASMLVQMNA--YDRVLKH 285
+A + L Q+ G+ E +++ LE D +L+ + + + K
Sbjct: 521 DARISLSTLQQQLGRPEKALEALEPMYDPDTLAQDANAAQQELKLLLHRSTLLFSQG-KM 579
Query: 286 IELVDLVYYSGKELLLALKIKAGICHIQLGNTDKAEILLTAIHWENVSD 334
VD + LL +A +C I + + + L + + +SD
Sbjct: 580 YGYVDTLLTMLAMLLKVAMNRAQVCLISSSKSGERHLYLIKVSRDKISD 628
Score = 43 (20.2 bits), Expect = 1.1e-21, Sum P(2) = 1.1e-21
Identities = 21/106 (19%), Positives = 52/106 (49%)
Query: 302 ALKIKAGICHIQLGNTDKAEILLTAIHWENVSDHA-ESINEIADLFKNRELYSTALKYYH 360
AL+ G +I+ ++ E +L + + A E + +A +++++ +L++
Sbjct: 144 ALRGLMGEANIRFARGEREEAILMCMEIIRQAPLAYEPFSTLAMIYEDQGDMEKSLQF-E 202
Query: 361 MLEANAGVHNDGCLHLKIAECSLALKEREKSIIYFYKALQILEDNI 406
++ A+ +D +++AE SL +++I + KAL+ N+
Sbjct: 203 LIAAHLNP-SDTEEWVRLAEMSLEQDNIKQAIFCYTKALKYEPTNV 247
Score = 37 (18.1 bits), Expect = 4.7e-21, Sum P(2) = 4.7e-21
Identities = 12/50 (24%), Positives = 23/50 (46%)
Query: 387 EREKSIIYFYKALQILEDNIDARLTLASLLLEDAKDEEAISLLTPPMSLE 436
+ EKS+ + A + + + + LA + LE ++AI T + E
Sbjct: 194 DMEKSLQFELIAAHLNPSDTEEWVRLAEMSLEQDNIKQAIFCYTKALKYE 243
>DICTYBASE|DDB_G0278321 [details] [associations]
symbol:gtf3C3 "transcription factor IIIC-gamma
subunit" species:44689 "Dictyostelium discoideum" [GO:0000127
"transcription factor TFIIIC complex" evidence=ISS] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR001440
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF00515 Pfam:PF13181 PROSITE:PS50005 PROSITE:PS50293
SMART:SM00028 dictyBase:DDB_G0278321 GenomeReviews:CM000152_GR
EMBL:AAFI02000023 Gene3D:1.25.40.10 GO:GO:0000127 eggNOG:NOG275814
KO:K15201 RefSeq:XP_642287.1 ProteinModelPortal:Q54YB5 PRIDE:Q54YB5
EnsemblProtists:DDB0231090 GeneID:8621494 KEGG:ddi:DDB_G0278321
InParanoid:Q54YB5 OMA:ASILEDH ProtClustDB:CLSZ2846841
Uniprot:Q54YB5
Length = 997
Score = 352 (129.0 bits), Expect = 2.1e-48, Sum P(2) = 2.1e-48
Identities = 81/284 (28%), Positives = 149/284 (52%)
Query: 481 ESSHQ-EETFNHEEHRLLIIDLCKTLASLHRYEDAIKIINLILKLGYGKFPVEKEELYFL 539
+S H E + E++ L++D K L+R ++A + + L+ + + + +L FL
Sbjct: 719 QSEHPYAELLDEEDYFNLLLDSSKIFVHLNRQQEASQYLRYALRNIHFENGLFSHQLKFL 778
Query: 540 GAQIPCNTTDPKLWFDGVRFMVKLHPHRLTTWNRYYKLVSRFEKIFSKHAKLLRNVRAKY 599
+ N + L + V+++ P+ WN + K++ + + + L + KY
Sbjct: 779 TVAVAFNDKNYYLAYKHVKYVCSKKPYSNRVWNLFNKIIVNYGNRSTVQNRFLTKINEKY 838
Query: 600 RDFVPPIIISGHQFTMISHHQDAAREYLEAYKLLPENPLINLCVGTALINLALGVRLQNK 659
D +P +I+ G+Q + + A EY++AY+L P++PLINL + +++ +G + N+
Sbjct: 839 SDSIPVLIMLGNQNKQTDNARGALFEYIKAYRLCPDDPLINLLISVLILSQVMGRKQANR 898
Query: 660 HQCVAQGLAFLYNNLRLAENSQEALYNIARAYHHVGLVSLAASYYEKVLAMYQKDCIIPG 719
H+ +FLY L SQE+LYN+ R YH +G+ ++A +YY+ VL Y+ +
Sbjct: 899 HRIAITSYSFLYKYYNLRGKSQESLYNLGRGYHQLGIYNMAINYYDMVLN-YEDEI---- 953
Query: 720 FPDHMEDWKPGHSD-LRREAAYNLHLIYKKSGAVDLARQVLRDH 762
D E + +D L+ EAA+NL LIYK G LA ++L+ +
Sbjct: 954 --DE-ETGEINKNDSLKCEAAFNLSLIYKSKGNTSLANEILKKY 994
Score = 239 (89.2 bits), Expect = 2.1e-48, Sum P(2) = 2.1e-48
Identities = 83/389 (21%), Positives = 175/389 (44%)
Query: 68 SKKYPSLKKRGRPEGSKK-KVCPEIRRMLGDASLHYALGRYEEAISVLHEVIRLEEELPN 126
+ K P KK+ R ++ ++ E+R++L + Y G ++ A S EV+R+ L
Sbjct: 207 TNKIPKKKKKKRFYSQQEIRIPKEVRKLLVGGNEQYTKGNFDLAFSTYAEVVRMLPRLSI 266
Query: 127 SYHILGLVHDALGNTAKAMGCYWLAACYKQKDSSLWKLIFPWLIEQGDTTWAMSCLSEAV 186
Y+ILG + ++ G A+G Y A Q + W I E G A+ C S A
Sbjct: 267 PYNILGKIKESQGEMEAALGFYVYGA-QMQGSNGDWSSIGVRAKEAGQMETALYCFSRAC 325
Query: 187 KADPNDFKLKFHLASLYVELGNFQRAADVYRQMVQLCPENIEALKMGAKLYQKSGQI-ES 245
+ D D + + + ++ G ++RA + ++ + + + L+ A++Y Q ++
Sbjct: 326 RNDETDLDSFWEKSLILIQKGFYKRALKILTKLSKYTNGSPQVLQELARVYSHLSQYHDA 385
Query: 246 SV---DILEDYLKGHPTEADFGV--IDLLASMLVQMNAYDRVLKHIELVDLVYYSGKELL 300
S +++++ L + + D + ++L+ + + Y + + Y + E+
Sbjct: 386 SAMISEVVDEQLLSNKSLDDVSLDSVNLMMELKNKTRNYQDTITIFNKITAKYGNDSEVP 445
Query: 301 LALKIKAGICHIQLG----NTDKAEILLTAIHWENVSDHAESINEIAD-LFKNRELYSTA 355
L A + LG N +++L + + S++ + +AD LF +
Sbjct: 446 FDLVFNACQAYYSLGTDFGNERGSKLLHLRLLPLDPSEYGDLFTSLADELFALGKYQDAL 505
Query: 356 LKYYHMLEANAGVHNDGCLHLKIAECSLALKEREKSIIYFYKALQILEDNIDARLTLASL 415
+ Y H+ + + + ++ +KIA+ + K E +I YF KA + + N+ L ++ +
Sbjct: 506 VVYLHLKDTDFDIPSNW---VKIADIHRSTKNYEVAIEYFSKANERVPGNVHTTLAMSEI 562
Query: 416 LLEDAKDEEAISLLTPPMSLENKYVNSDK 444
E DE+A+ +L ++ N+ S+K
Sbjct: 563 YKEMGDDEKALQILNQSSTISNRNDQSEK 591
Score = 39 (18.8 bits), Expect = 4.9e-15, Sum P(2) = 4.9e-15
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 682 EALYNIARAYHHVGLVSLAASYYEKVLAM 710
EA +N++ Y G SLA +K + +
Sbjct: 969 EAAFNLSLIYKSKGNTSLANEILKKYIVV 997
>UNIPROTKB|F1NEE6 [details] [associations]
symbol:GTF3C3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000127 "transcription factor TFIIIC complex"
evidence=IEA] InterPro:IPR001440 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF00515 PROSITE:PS50005
PROSITE:PS50293 SMART:SM00028 Gene3D:1.25.40.10 GO:GO:0000127
OMA:IHLAIHY GeneTree:ENSGT00390000016929 EMBL:AADN02019803
IPI:IPI00820400 Ensembl:ENSGALT00000039376 ArrayExpress:F1NEE6
Uniprot:F1NEE6
Length = 913
Score = 280 (103.6 bits), Expect = 1.1e-43, Sum P(3) = 1.1e-43
Identities = 71/265 (26%), Positives = 136/265 (51%)
Query: 497 LIIDLCKTLASLHRYEDAIKIINLILKLGYGKFP--VEKEELYFLGAQIPCNTTDPKLWF 554
L++ +L L RY++A +++ L+ Y + +++EL + G + + +
Sbjct: 655 LLLKAIYSLCDLSRYKEAELLVDSSLEY-YSFYDDRQKRKELEYFGLSAAILDKNFRKAY 713
Query: 555 DGVRFMVKLHPHRLTTWNRYYKLVSRFEKIFSKHAKLLRNVRAKYRDFVPPIIISGHQFT 614
+ +R MV + ++ WN + ++ + + + +H + + K D +++GH
Sbjct: 714 NYIRIMVMENVNKPQLWNIFNQVTMQSQDV--RHHRFCLRLMLKNPDNHALCVLNGHNAF 771
Query: 615 MISHHQDAAREYLEAYKLLPENPLINLCVGTALINLALGVRLQNKHQCVAQGLAFLYNNL 674
+ + A +Y++A++ P+ PL +LC+G I++A + +H + QG +FL+ L
Sbjct: 772 VSGSFKHALGQYVQAFRANPDEPLYSLCIGLTFIHMASQKYVLKRHALLVQGFSFLHRYL 831
Query: 675 RLAENSQEALYNIARAYHHVGLVSLAASYYEKVLAMYQKDCIIPGFPDHMEDWKPGHSDL 734
L QE YN+ R H +GL+ LA YY+KVL + P P +E + +DL
Sbjct: 832 DLRGPCQETFYNLGRGLHQLGLLHLAIHYYQKVLEL-------P--PLTLEGIETDQTDL 882
Query: 735 RREAAYNLHLIYKKSGAVDLARQVL 759
RR+ A+NL LIY SG +A+++L
Sbjct: 883 RRDTAFNLSLIYHSSGNTRMAQKML 907
Score = 213 (80.0 bits), Expect = 1.1e-43, Sum P(3) = 1.1e-43
Identities = 52/214 (24%), Positives = 110/214 (51%)
Query: 75 KKRGRPEGSKKKVCPEIRRMLGDASLHYALGRYEEAISVLHEVIRLEEELPNSYHILGLV 134
KK + + + K+ +R ++G+A++ +A G EEAI + E+IR + L ++
Sbjct: 127 KKMMKEKRPRSKLPRALRGLMGEANIRFARGEREEAILMCMEIIRQAPLAHEPFSTLAMI 186
Query: 135 HDALGNTAKAMGCYWLAACYKQKDSSLWKLIFPWLIEQGDTTWAMSCLSEAVKADPNDFK 194
++ G+ K++ +AA ++ W + +EQ + A+ C ++A+K DP + +
Sbjct: 187 YEDQGDMEKSLQFELIAAHLNPSNTEEWVRLAEMSLEQDNIKQAIFCYAKALKYDPTNVR 246
Query: 195 LKFHLASLYVELGNFQRAADVYRQMVQLC-PENIEA-LKMG---AKLYQKSGQIESSVDI 249
+ +SLY +LG + A D YR+++ L P + E +++ AK Y ++ S+++I
Sbjct: 247 YLWERSSLYEQLGEHKLAMDGYRRILNLLSPSDGERFMQLARDMAKSYYEANDAASAIEI 306
Query: 250 LEDYLKGHPTEADFGVIDLLASMLVQMNAYDRVL 283
+E+ H + +++ A + + YD+ L
Sbjct: 307 IEEAFTKHQSLVSMEDVNIAAELYISSKQYDKAL 340
Score = 102 (41.0 bits), Expect = 1.1e-43, Sum P(3) = 1.1e-43
Identities = 37/180 (20%), Positives = 85/180 (47%)
Query: 303 LKIKAGICHIQLGNTDKAEILLTAIHWENVSDHAESINEIADLFKNRELYSTALKYYHML 362
+ +K +C + L + LLT + +N + + ++A+ F + Y++AL L
Sbjct: 412 ITVKLMVCLVHLNILEPLNPLLTTLVEQNPEEMGDLYLDVAEAFLDVGEYNSALPLLSAL 471
Query: 363 EANAGVHNDGCLHLKIA---ECSLALKEREKSIIYFYKALQILEDNIDARLTLASLLLED 419
+ +N + L+ A EC AL E++ + K + + ++DAR++L++L +
Sbjct: 472 VCSER-YNLAVVWLRHAVYLECLKALGHMERAAESYTKVVDLAPLHLDARISLSTLQQQL 530
Query: 420 AKDEEAISLLTPPMSLENKYVNSDKTHAWWLNIRIKIKLCRIYKAKGMIEGFVDMLLPLV 479
+ E+A+ L + + + +A +++ + + ++G G+VD LL ++
Sbjct: 531 GRPEKALEALE---QMYDPDTLAQDANAAQQELKLLLHRSTLLYSQGKTYGYVDTLLTML 587
Score = 90 (36.7 bits), Expect = 6.0e-25, Sum P(2) = 6.0e-25
Identities = 37/172 (21%), Positives = 76/172 (44%)
Query: 170 IEQGDTTWAMSCLSEAVKADPNDFKLKFHLASLYVE----LGNFQRAADVYRQMVQLCPE 225
++ G+ A+ LS V ++ + + + ++Y+E LG+ +RAA+ Y ++V L P
Sbjct: 456 LDVGEYNSALPLLSALVCSERYNLAVVWLRHAVYLECLKALGHMERAAESYTKVVDLAPL 515
Query: 226 NIEALKMGAKLYQKSGQIESSVDILEDYLKGHPTEADFGVIDLLASMLVQMNA--YDRVL 283
+++A + L Q+ G+ E +++ LE D +L+ + Y +
Sbjct: 516 HLDARISLSTLQQQLGRPEKALEALEQMYDPDTLAQDANAAQQELKLLLHRSTLLYSQG- 574
Query: 284 KHIELVDLVYYSGKELLLALKIKAGICHIQLGNTDKAEILLTAIHWENVSDH 335
K VD + LL +A +C I + + + L + +SD+
Sbjct: 575 KTYGYVDTLLTMLAMLLKVAMSRAQVCLISSSKSGERHLYLIKVPRNKISDN 626
Score = 57 (25.1 bits), Expect = 1.7e-21, Sum P(2) = 1.7e-21
Identities = 52/242 (21%), Positives = 97/242 (40%)
Query: 140 NTAKAMGCYWLAACYKQKDSS-LWKLIFPWLIEQ-GDTTWAMSCLSEAVKA-DPND---- 192
N +A+ CY A Y + LW+ L EQ G+ AM + P+D
Sbjct: 226 NIKQAIFCYAKALKYDPTNVRYLWERSS--LYEQLGEHKLAMDGYRRILNLLSPSDGERF 283
Query: 193 FKLKFHLASLYVELGNFQRAADVYRQMVQLCPE--NIEALKMGAKLYQKSGQIESSVDIL 250
+L +A Y E + A ++ + ++E + + A+LY S Q + ++ ++
Sbjct: 284 MQLARDMAKSYYEANDAASAIEIIEEAFTKHQSLVSMEDVNIAAELYISSKQYDKALAVI 343
Query: 251 EDYL---------KGHPTEAD----FGVIDLLASM-LVQMNAYDRVLKH-IELVDLVYYS 295
DY + P E V++ S V N D V + V+ V
Sbjct: 344 TDYAGIVLERKASEKSPAEEKKDDAAAVVETQESREAVTDNQSDPVAESSAAAVEKVSCC 403
Query: 296 GKE-LLLALKIKAGICHIQLGNTDKAEILLTAIHWENVSDHAESINEIADLFKNRELYST 354
E + + + +K +C + L + LLT + +N + + ++A+ F + Y++
Sbjct: 404 IPEGVPIDITVKLMVCLVHLNILEPLNPLLTTLVEQNPEEMGDLYLDVAEAFLDVGEYNS 463
Query: 355 AL 356
AL
Sbjct: 464 AL 465
Score = 43 (20.2 bits), Expect = 4.9e-20, Sum P(2) = 4.9e-20
Identities = 21/106 (19%), Positives = 51/106 (48%)
Query: 302 ALKIKAGICHIQLGNTDKAEILLTAIHWENVSDHA-ESINEIADLFKNRELYSTALKYYH 360
AL+ G +I+ ++ E +L + + A E + +A +++++ +L++
Sbjct: 142 ALRGLMGEANIRFARGEREEAILMCMEIIRQAPLAHEPFSTLAMIYEDQGDMEKSLQF-E 200
Query: 361 MLEANAGVHNDGCLHLKIAECSLALKEREKSIIYFYKALQILEDNI 406
++ A+ N +++AE SL +++I + KAL+ N+
Sbjct: 201 LIAAHLNPSNTE-EWVRLAEMSLEQDNIKQAIFCYAKALKYDPTNV 245
Score = 39 (18.8 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 16/59 (27%), Positives = 26/59 (44%)
Query: 324 LTAIHWEN----VSDHAESINEIADLFKNRELYSTALKYYHMLEANAGVHNDGCLHLKI 378
LT IH + + HA + + L + +L + ++ L G+H G LHL I
Sbjct: 802 LTFIHMASQKYVLKRHALLVQGFSFLHRYLDLRGPCQETFYNL--GRGLHQLGLLHLAI 858
Score = 37 (18.1 bits), Expect = 2.1e-19, Sum P(2) = 2.1e-19
Identities = 11/40 (27%), Positives = 20/40 (50%)
Query: 387 EREKSIIYFYKALQILEDNIDARLTLASLLLEDAKDEEAI 426
+ EKS+ + A + N + + LA + LE ++AI
Sbjct: 192 DMEKSLQFELIAAHLNPSNTEEWVRLAEMSLEQDNIKQAI 231
>RGD|1309185 [details] [associations]
symbol:Gtf3c3 "general transcription factor IIIC, polypeptide 3"
species:10116 "Rattus norvegicus" [GO:0000127 "transcription factor
TFIIIC complex" evidence=IEA;ISO] InterPro:IPR001440
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF00515 Pfam:PF13181 PROSITE:PS50005 PROSITE:PS50293
SMART:SM00028 RGD:1309185 Gene3D:1.25.40.10 EMBL:CH473965
GO:GO:0000127 KO:K15201 CTD:9330 OMA:IHLAIHY OrthoDB:EOG4CJVGH
GeneTree:ENSGT00390000016929 IPI:IPI00363793 RefSeq:NP_001101709.1
UniGene:Rn.6721 Ensembl:ENSRNOT00000002864 GeneID:316810
KEGG:rno:316810 UCSC:RGD:1309185 NextBio:671246 Uniprot:D4A7Q9
Length = 883
Score = 291 (107.5 bits), Expect = 3.4e-39, Sum P(2) = 3.4e-39
Identities = 73/269 (27%), Positives = 135/269 (50%)
Query: 497 LIIDLCKTLASLHRYEDAIKIINLILKLGYGKFP--VEKEELYFLGAQIPCNTTDPKLWF 554
L++ TL+ L R+++A +++ L+ Y + +++EL + G + + +
Sbjct: 625 LLLKAIYTLSDLSRFQEAELLVDSSLEY-YSFYDDRQKRKELEYFGLSAAILDKNFRKAY 683
Query: 555 DGVRFMVKLHPHRLTTWNRYYKLVSRFEKIFSKHAKLLRNVRAKYRDFVPPIIISGHQFT 614
D +R MV + ++ WN + ++ + + +H + + K D +++GH
Sbjct: 684 DYIRVMVMENVNKPQLWNIFNQVTMHSQDV--RHHRFCLRLMLKNPDNHALCVLNGHNAF 741
Query: 615 MISHHQDAAREYLEAYKLLPENPLINLCVGTALINLALGVRLQNKHQCVAQGLAFLYNNL 674
+ + A +Y++A++ P PL NLC+G I++A + +H QG +FL L
Sbjct: 742 VSGSFKHALGQYVQAFRAYPSEPLYNLCIGLTFIHMASQKYVLKRHALTVQGFSFLNRYL 801
Query: 675 RLAENSQEALYNIARAYHHVGLVSLAASYYEKVLAMYQKDCIIPGFPDHMEDWKPGHSDL 734
+ QE+ YN+ R H +GL LA YY+K LA+ P P +E + DL
Sbjct: 802 SIRGPCQESFYNLGRGLHQLGLTHLAIHYYQKALAL-------P--PIVVEGIEVDQLDL 852
Query: 735 RREAAYNLHLIYKKSGAVDLARQVLRDHC 763
RR+ AYN+ LIY+ SG +A+++L +C
Sbjct: 853 RRDIAYNMSLIYQSSGNTAMAQKLLYTYC 881
Score = 214 (80.4 bits), Expect = 3.4e-39, Sum P(2) = 3.4e-39
Identities = 52/217 (23%), Positives = 113/217 (52%)
Query: 75 KKRGRPEGSKKKVCPEIRRMLGDASLHYALGRYEEAISVLHEVIRLEEELPNSYHILGLV 134
KK + + + K+ +R ++G+A++ +A G +EEAI + E+IR + L ++
Sbjct: 130 KKMMKEKRPRSKLPRALRGLMGEANIRFARGEHEEAILMCMEIIRQAPLAYEPFSTLAMI 189
Query: 135 HDALGNTAKAMGCYWLAACYKQKDSSLWKLIFPWLIEQGDTTWAMSCLSEAVKADPNDFK 194
++ G+ K++ +AA D+ W + +EQ + A+ C ++A+K +P + +
Sbjct: 190 YEDQGDMEKSLQFELIAAHLNPSDTEEWVRLAEMSLEQDNIKQAIFCYTKALKYEPTNVR 249
Query: 195 LKFHLASLYVELGNFQRAADVYRQMVQLC-PENIEA-LKMG---AKLYQKSGQIESSVDI 249
+ +SLY ++G+ + A D YR+++ L P + E +++ AK Y ++ S+++I
Sbjct: 250 YLWERSSLYEQMGDHKMAMDGYRRILNLLSPSDGERFMQLARDMAKSYYEANDSTSAINI 309
Query: 250 LEDYLKGHPTEADFGVIDLLASMLVQMNAYDRVLKHI 286
+E+ H +++ A + + YD+ L+ I
Sbjct: 310 IEEAFSKHQGLVSMEDVNIAAELYISNKQYDKALEVI 346
Score = 134 (52.2 bits), Expect = 8.2e-31, Sum P(2) = 8.2e-31
Identities = 73/349 (20%), Positives = 152/349 (43%)
Query: 140 NTAKAMGCYWLAACYKQKDSS-LWKLIFPWLIEQ-GDTTWAMSCLSEAVKA-DPND---- 192
N +A+ CY A Y+ + LW+ L EQ GD AM + P+D
Sbjct: 229 NIKQAIFCYTKALKYEPTNVRYLWERSS--LYEQMGDHKMAMDGYRRILNLLSPSDGERF 286
Query: 193 FKLKFHLASLYVELGNFQRAADVYRQMVQLCPE--NIEALKMGAKLYQKSGQIESSVDIL 250
+L +A Y E + A ++ + ++E + + A+LY + Q + +++++
Sbjct: 287 MQLARDMAKSYYEANDSTSAINIIEEAFSKHQGLVSMEDVNIAAELYISNKQYDKALEVI 346
Query: 251 EDYLKGHPTEADFGVIDLLASMLVQMNAYDRVLKHIELVDLVYYSGKELLLALKIKAGIC 310
D+ G+I L L + + + K E V + + +K+ +C
Sbjct: 347 TDFS---------GII-LEKETLEEGTSEEN--KAAETVTCSIPDSVPIDITVKLM--VC 392
Query: 311 HIQLGNTDKAEILLTAIHWENVSDHAESINEIADLFKNRELYSTALKYYHMLEANAGVHN 370
+ L + LLT + +N D + ++A+ F + Y++AL L + +N
Sbjct: 393 LVHLNILEPLNPLLTTLVEQNPEDMGDLYLDVAEAFLDVGEYNSALPLLSALVCSER-YN 451
Query: 371 DGCLHLKIAECSLALKEREKSIIYFYKALQILEDNIDARLTLASLLLEDAKDEEAISLLT 430
+ L+ AEC AL E++ + K + + ++DAR++L+ L + + E+A+ L
Sbjct: 452 LAVVWLRHAECLKALGYMERAAESYSKVVDLAPLHLDARISLSILQQQLGRPEKALEALE 511
Query: 431 PPMSLENKYVNSDKTHAWWLNIRIKIKLCRIYKAKGMIEGFVDMLLPLV 479
P + + +A +++ + + ++G + G++D LL ++
Sbjct: 512 PMYDPDTL---AQDANAAQQELKLLLHRSTLLFSQGKMYGYLDTLLTML 557
Score = 78 (32.5 bits), Expect = 6.0e-25, Sum P(2) = 6.0e-25
Identities = 35/171 (20%), Positives = 75/171 (43%)
Query: 170 IEQGDTTWAMSCLSEAVKADPNDFKLKF-HLASLYVELGNFQRAADVYRQMVQLCPENIE 228
++ G+ A+ LS V ++ + + + A LG +RAA+ Y ++V L P +++
Sbjct: 429 LDVGEYNSALPLLSALVCSERYNLAVVWLRHAECLKALGYMERAAESYSKVVDLAPLHLD 488
Query: 229 ALKMGAKLYQKSGQIESSVDILEDYLKGHPTEADFGVIDLLASMLVQMNA--YDRVLKHI 286
A + L Q+ G+ E +++ LE D +L+ + + + +
Sbjct: 489 ARISLSILQQQLGRPEKALEALEPMYDPDTLAQDANAAQQELKLLLHRSTLLFSQGKMYG 548
Query: 287 ELVDLVYYSGKELLLALKIKAGICHIQLGNTDKAEILLTAIHWENVSDHAE 337
L L+ L +A+ +A +C I + + + L + + +SD+ E
Sbjct: 549 YLDTLLTMLAMLLKVAMN-RAQVCLISSSKSGERHLYLIKVSRDKISDNNE 598
Score = 40 (19.1 bits), Expect = 5.5e-21, Sum P(2) = 5.5e-21
Identities = 21/106 (19%), Positives = 51/106 (48%)
Query: 302 ALKIKAGICHIQLGNTDKAEILLTAIHWENVSDHA-ESINEIADLFKNRELYSTALKYYH 360
AL+ G +I+ + E +L + + A E + +A +++++ +L++
Sbjct: 145 ALRGLMGEANIRFARGEHEEAILMCMEIIRQAPLAYEPFSTLAMIYEDQGDMEKSLQF-E 203
Query: 361 MLEANAGVHNDGCLHLKIAECSLALKEREKSIIYFYKALQILEDNI 406
++ A+ +D +++AE SL +++I + KAL+ N+
Sbjct: 204 LIAAHLNP-SDTEEWVRLAEMSLEQDNIKQAIFCYTKALKYEPTNV 248
Score = 37 (18.1 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
Identities = 12/50 (24%), Positives = 23/50 (46%)
Query: 387 EREKSIIYFYKALQILEDNIDARLTLASLLLEDAKDEEAISLLTPPMSLE 436
+ EKS+ + A + + + + LA + LE ++AI T + E
Sbjct: 195 DMEKSLQFELIAAHLNPSDTEEWVRLAEMSLEQDNIKQAIFCYTKALKYE 244
>UNIPROTKB|E1BPR9 [details] [associations]
symbol:GTF3C3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0000127 "transcription factor TFIIIC complex"
evidence=IEA] InterPro:IPR001440 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF00515 Pfam:PF13181
PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028 Gene3D:1.25.40.10
GO:GO:0000127 OMA:IHLAIHY GeneTree:ENSGT00390000016929
EMBL:DAAA02005500 EMBL:DAAA02005501 IPI:IPI00699952
Ensembl:ENSBTAT00000010228 Uniprot:E1BPR9
Length = 886
Score = 274 (101.5 bits), Expect = 6.0e-38, Sum P(2) = 6.0e-38
Identities = 78/271 (28%), Positives = 132/271 (48%)
Query: 497 LIIDLCKTLASLHRYEDAIKIINLILKLG--YGKFPVEKEELYF-LGAQIPCNTTDPKLW 553
L++ +L L R+++A +++ L+ Y P KE YF L A I
Sbjct: 627 LLLKAIYSLCDLSRFQEAELLVDSSLEYCSFYEDKPKRKELEYFGLSAAILDKNFRKAYN 686
Query: 554 FDGVRFMVKLHPHRLTTWNRYYKLVSRFEKIFSKHAKLLRNVRAKYRDFVPPIIISGHQF 613
+ R MV + ++ WN + ++ +++ +H + + K D +++GH
Sbjct: 687 YISFRIMVMENVNKPQLWNIFNQVTMHSQEV--RHHRFCLRLMLKNPDNHALCVLNGHNA 744
Query: 614 TMISHHQDAAREYLEAYKLLPENPLINLCVGTALINLALGVRLQNKHQCVAQGLAFLYNN 673
+ + R+Y++A++ P+ PL NLC T I++A + +H + QG +FL
Sbjct: 745 FVSGSFKHVIRQYVQAFRTHPQEPLYNLCAKT-FIHMASQKYVFKRHALIVQGFSFLNRY 803
Query: 674 LRLAENSQEALYNIARAYHHVGLVSLAASYYEKVLAMYQKDCIIPGFPDHMEDWKPGHSD 733
L L QE YN+ RA H +GL LA YY+K L + P P +E + D
Sbjct: 804 LSLRGPCQETFYNLGRALHQLGLQHLAIHYYQKALEL-------P--PLVVEGIEIDQID 854
Query: 734 LRREAAYNLHLIYKKSGAVDLARQVLRDHCT 764
LRR+ AYNL LIY+ SG +A+++L +C+
Sbjct: 855 LRRDIAYNLSLIYQNSGNTGMAQKLLFTYCS 885
Score = 220 (82.5 bits), Expect = 6.0e-38, Sum P(2) = 6.0e-38
Identities = 53/217 (24%), Positives = 112/217 (51%)
Query: 75 KKRGRPEGSKKKVCPEIRRMLGDASLHYALGRYEEAISVLHEVIRLEEELPNSYHILGLV 134
KK + + + K+ +R ++G+A++ +A G EEAI + E+IR + L ++
Sbjct: 132 KKMMKEKRPRSKLPRALRGLMGEANIRFARGEREEAILMCMEIIRQAPLAYEPFSTLAMI 191
Query: 135 HDALGNTAKAMGCYWLAACYKQKDSSLWKLIFPWLIEQGDTTWAMSCLSEAVKADPNDFK 194
++ G+ K++ +AA D+ W + +EQ + A+ C ++A+K +P + +
Sbjct: 192 YEDQGDMEKSLQFELIAAHLNPSDTEEWVRLAEMSLEQDNIKQAIFCYTKALKYEPTNVR 251
Query: 195 LKFHLASLYVELGNFQRAADVYRQMVQLC-PEN----IEALKMGAKLYQKSGQIESSVDI 249
+ +SLY ++G+ + A D YR+++ L P + ++ + AK Y ++ + S++ I
Sbjct: 252 YLWERSSLYEQMGDHKMAMDGYRRILNLLSPSDGERFMQLTRDMAKSYYEANDVTSAISI 311
Query: 250 LEDYLKGHPTEADFGVIDLLASMLVQMNAYDRVLKHI 286
+E+ L H +++ A + + YDR L+ I
Sbjct: 312 IEEALSKHQGLVSMEDVNIAAELYISNKQYDRALEVI 348
Score = 137 (53.3 bits), Expect = 3.0e-29, Sum P(2) = 3.0e-29
Identities = 72/349 (20%), Positives = 153/349 (43%)
Query: 140 NTAKAMGCYWLAACYKQKDSS-LWKLIFPWLIEQ-GDTTWAMSCLSEAVKA-DPND---- 192
N +A+ CY A Y+ + LW+ L EQ GD AM + P+D
Sbjct: 231 NIKQAIFCYTKALKYEPTNVRYLWERSS--LYEQMGDHKMAMDGYRRILNLLSPSDGERF 288
Query: 193 FKLKFHLASLYVELGNFQRAADVYRQMVQLCPE--NIEALKMGAKLYQKSGQIESSVDIL 250
+L +A Y E + A + + + ++E + + A+LY + Q + +++++
Sbjct: 289 MQLTRDMAKSYYEANDVTSAISIIEEALSKHQGLVSMEDVNIAAELYISNKQYDRALEVI 348
Query: 251 EDYLKGHPTEADFGVIDLLASMLVQMNAYDRVLKHIELVDLVYYSGKELLLALKIKAGIC 310
D+ G++ L + + K + V G + + +K+ +C
Sbjct: 349 TDFS---------GIV--LEKRTTEEGTSEEN-KGGDNVICAIPDGVPIDITVKLM--VC 394
Query: 311 HIQLGNTDKAEILLTAIHWENVSDHAESINEIADLFKNRELYSTALKYYHMLEANAGVHN 370
+ L + LLT + +N D + ++A+ F + Y++AL L + +N
Sbjct: 395 LVHLNILEPLNPLLTTLVEQNPEDMGDLYLDVAEAFLDVGEYNSALPLLSALVCSER-YN 453
Query: 371 DGCLHLKIAECSLALKEREKSIIYFYKALQILEDNIDARLTLASLLLEDAKDEEAISLLT 430
+ L+ AEC AL E++ + K + + ++DAR++L++L + + E+A+ L
Sbjct: 454 LAVVWLRHAECLKALGYMERAAESYSKVVDLAPLHLDARISLSTLQQQLGRPEKALEALE 513
Query: 431 PPMSLENKYVNSDKTHAWWLNIRIKIKLCRIYKAKGMIEGFVDMLLPLV 479
P + + +A +++ ++ + ++G + G+VD LL ++
Sbjct: 514 PMYDPDTL---AQDANAAQQELKLLLQRSTLLFSQGKMYGYVDTLLTML 559
Score = 43 (20.2 bits), Expect = 2.0e-19, Sum P(2) = 2.0e-19
Identities = 21/106 (19%), Positives = 52/106 (49%)
Query: 302 ALKIKAGICHIQLGNTDKAEILLTAIHWENVSDHA-ESINEIADLFKNRELYSTALKYYH 360
AL+ G +I+ ++ E +L + + A E + +A +++++ +L++
Sbjct: 147 ALRGLMGEANIRFARGEREEAILMCMEIIRQAPLAYEPFSTLAMIYEDQGDMEKSLQF-E 205
Query: 361 MLEANAGVHNDGCLHLKIAECSLALKEREKSIIYFYKALQILEDNI 406
++ A+ +D +++AE SL +++I + KAL+ N+
Sbjct: 206 LIAAHLNP-SDTEEWVRLAEMSLEQDNIKQAIFCYTKALKYEPTNV 250
Score = 37 (18.1 bits), Expect = 8.4e-19, Sum P(2) = 8.4e-19
Identities = 12/50 (24%), Positives = 23/50 (46%)
Query: 387 EREKSIIYFYKALQILEDNIDARLTLASLLLEDAKDEEAISLLTPPMSLE 436
+ EKS+ + A + + + + LA + LE ++AI T + E
Sbjct: 197 DMEKSLQFELIAAHLNPSDTEEWVRLAEMSLEQDNIKQAIFCYTKALKYE 246
>UNIPROTKB|E2QYG3 [details] [associations]
symbol:GTF3C3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0000127 "transcription factor TFIIIC complex"
evidence=IEA] InterPro:IPR001440 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF00515 Pfam:PF13181
PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028 Gene3D:1.25.40.10
GO:GO:0000127 KO:K15201 CTD:9330 OMA:IHLAIHY
GeneTree:ENSGT00390000016929 EMBL:AAEX03017978 EMBL:AAEX03017979
RefSeq:XP_536013.2 ProteinModelPortal:E2QYG3
Ensembl:ENSCAFT00000017063 GeneID:478851 KEGG:cfa:478851
NextBio:20854125 Uniprot:E2QYG3
Length = 883
Score = 282 (104.3 bits), Expect = 1.3e-37, Sum P(3) = 1.3e-37
Identities = 73/271 (26%), Positives = 137/271 (50%)
Query: 497 LIIDLCKTLASLHRYEDAIKIINLILKLGYGKFPVEKE---ELYFLGAQIPCNTTDPKLW 553
L++ L L R+++A +++ L+ Y F +K+ EL + G + +
Sbjct: 625 LLLKAIYCLCDLSRFQEAELLVDSSLE--YYSFYDDKQKRKELEYFGLSAAILDKNFRKA 682
Query: 554 FDGVRFMVKLHPHRLTTWNRYYKLVSRFEKIFSKHAKLLRNVRAKYRDFVPPIIISGHQF 613
++ +R MV + ++ WN + ++ +++ +H + + K + +++GH
Sbjct: 683 YNYIRVMVMENVNKPQLWNIFNQVTMHSQEV--RHHRFCLRLMLKNPENHALCVLNGHNA 740
Query: 614 TMISHHQDAAREYLEAYKLLPENPLINLCVGTALINLALGVRLQNKHQCVAQGLAFLYNN 673
+ + A +Y++A++ P PL +LC+G I++A + +H QG +FL
Sbjct: 741 FVSGSFKHALGQYVQAFRTHPHEPLYSLCIGLTFIHMASQKYVLRRHALTVQGFSFLNRY 800
Query: 674 LRLAENSQEALYNIARAYHHVGLVSLAASYYEKVLAMYQKDCIIPGFPDHMEDWKPGHSD 733
L + QE+ YN+ R H +GL+ LA YY+K L D +P P +E + D
Sbjct: 801 LSIRGPCQESFYNLGRGLHQLGLIHLAIHYYQKAL-----D--LP--PLVVEGMEVDQLD 851
Query: 734 LRREAAYNLHLIYKKSGAVDLARQVLRDHCT 764
LRR+ AYNL LIY+ SG + +A+++L +CT
Sbjct: 852 LRRDIAYNLSLIYQSSGNIGMAQKLLYTYCT 882
Score = 215 (80.7 bits), Expect = 1.3e-37, Sum P(3) = 1.3e-37
Identities = 73/321 (22%), Positives = 150/321 (46%)
Query: 75 KKRGRPEGSKKKVCPEIRRMLGDASLHYALGRYEEAISVLHEVIRLEEELPNSYHILGLV 134
KK + + + K+ +R ++G+A++ +A G EEAI + E+IR + L ++
Sbjct: 131 KKMMKEKRPRSKLPRALRGLMGEANIRFARGEREEAILMCMEIIRQAPLAYEPFSTLAMI 190
Query: 135 HDALGNTAKAMGCYWLAACYKQKDSSLWKLIFPWLIEQGDTTWAMSCLSEAVKADPNDFK 194
++ G+ K++ +AA D+ W + +EQ + A+ C ++A+K +P + +
Sbjct: 191 YEDQGDMEKSLQFELIAAHLNPSDTEEWVRLAEMSLEQDNIKQAIFCYTKALKYEPTNVR 250
Query: 195 LKFHLASLYVELGNFQRAADVYRQMVQLC-PENIEA-LKMG---AKLYQKSGQIESSVDI 249
+ +SLY ++G+ + A D YR+++ L P + E +++ AK Y ++ + S+++I
Sbjct: 251 YLWERSSLYEQMGDHKMAMDGYRRILNLLSPSDGERFMQLARDMAKSYYEANDVTSAINI 310
Query: 250 LEDYLKGHPTEADFGVIDLLASMLVQMNAYDRVLKHI-ELVDLVYYSGKELLLALKIKAG 308
+E+ H +++ A + + YD+ L+ I + +V E + + KAG
Sbjct: 311 IEEAFSKHQGLVSMEDVNIAAELYISNKHYDKALEVITDFSGIVLEKNAEEGTSEENKAG 370
Query: 309 ---ICHIQLG-NTD-KAEILLTAIHWENVSDHAESINEIADLFKNRELYSTALKYYHMLE 363
C I G D ++++ +H N+ E +N + + Y + E
Sbjct: 371 ENVTCSIPDGVPIDITVKLMVCLVHL-NI---LEPLNPLLTTLVEQNPEDMGDLYLDVAE 426
Query: 364 A--NAGVHNDGCLHLKIAECS 382
A + G +N L CS
Sbjct: 427 AFLDVGEYNSALPLLSALVCS 447
Score = 132 (51.5 bits), Expect = 1.3e-29, Sum P(2) = 1.3e-29
Identities = 71/350 (20%), Positives = 155/350 (44%)
Query: 140 NTAKAMGCYWLAACYKQKDSS-LWKLIFPWLIEQ-GDTTWAMSCLSEAVKA-DPND---- 192
N +A+ CY A Y+ + LW+ L EQ GD AM + P+D
Sbjct: 230 NIKQAIFCYTKALKYEPTNVRYLWERSS--LYEQMGDHKMAMDGYRRILNLLSPSDGERF 287
Query: 193 FKLKFHLASLYVELGNFQRAADVYRQMVQLCPE--NIEALKMGAKLYQKSGQIESSVDIL 250
+L +A Y E + A ++ + ++E + + A+LY + + +++++
Sbjct: 288 MQLARDMAKSYYEANDVTSAINIIEEAFSKHQGLVSMEDVNIAAELYISNKHYDKALEVI 347
Query: 251 EDYLKGHPTEADFGVIDLLASMLVQMNAYDRVLKHIELVDLVYYSGKE-LLLALKIKAGI 309
D+ G++ ++ NA + + + + V S + + + + +K +
Sbjct: 348 TDFS---------GIV-------LEKNAEEGTSEENKAGENVTCSIPDGVPIDITVKLMV 391
Query: 310 CHIQLGNTDKAEILLTAIHWENVSDHAESINEIADLFKNRELYSTALKYYHMLEANAGVH 369
C + L + LLT + +N D + ++A+ F + Y++AL L + +
Sbjct: 392 CLVHLNILEPLNPLLTTLVEQNPEDMGDLYLDVAEAFLDVGEYNSALPLLSALVCSER-Y 450
Query: 370 NDGCLHLKIAECSLALKEREKSIIYFYKALQILEDNIDARLTLASLLLEDAKDEEAISLL 429
N + L+ AEC AL E++ + K + + ++DAR++L++L + + E+A+ L
Sbjct: 451 NLAVVWLRHAECLKALGYMERAAESYGKVVDLAPLHLDARISLSTLQQQLGRPEKALEAL 510
Query: 430 TPPMSLENKYVNSDKTHAWWLNIRIKIKLCRIYKAKGMIEGFVDMLLPLV 479
P + + +A +++ + + ++G + G+VD LL ++
Sbjct: 511 EPMYDPDTL---AQDANAAQQELKLLLHRSTLLFSQGKMCGYVDTLLTML 557
Score = 80 (33.2 bits), Expect = 3.6e-24, Sum P(2) = 3.6e-24
Identities = 35/171 (20%), Positives = 74/171 (43%)
Query: 170 IEQGDTTWAMSCLSEAVKADPNDFKLKF-HLASLYVELGNFQRAADVYRQMVQLCPENIE 228
++ G+ A+ LS V ++ + + + A LG +RAA+ Y ++V L P +++
Sbjct: 429 LDVGEYNSALPLLSALVCSERYNLAVVWLRHAECLKALGYMERAAESYGKVVDLAPLHLD 488
Query: 229 ALKMGAKLYQKSGQIESSVDILEDYLKGHPTEADFGVIDLLASMLVQMNA--YDRVLKHI 286
A + L Q+ G+ E +++ LE D +L+ + + + K
Sbjct: 489 ARISLSTLQQQLGRPEKALEALEPMYDPDTLAQDANAAQQELKLLLHRSTLLFSQG-KMC 547
Query: 287 ELVDLVYYSGKELLLALKIKAGICHIQLGNTDKAEILLTAIHWENVSDHAE 337
VD + LL +A +C I + + + L + + +SD+++
Sbjct: 548 GYVDTLLTMLAMLLKVAMNRAQVCLISSSKSGERHLYLIKVSRDKISDNSD 598
Score = 43 (20.2 bits), Expect = 8.0e-20, Sum P(3) = 8.0e-20
Identities = 21/106 (19%), Positives = 52/106 (49%)
Query: 302 ALKIKAGICHIQLGNTDKAEILLTAIHWENVSDHA-ESINEIADLFKNRELYSTALKYYH 360
AL+ G +I+ ++ E +L + + A E + +A +++++ +L++
Sbjct: 146 ALRGLMGEANIRFARGEREEAILMCMEIIRQAPLAYEPFSTLAMIYEDQGDMEKSLQF-E 204
Query: 361 MLEANAGVHNDGCLHLKIAECSLALKEREKSIIYFYKALQILEDNI 406
++ A+ +D +++AE SL +++I + KAL+ N+
Sbjct: 205 LIAAHLNP-SDTEEWVRLAEMSLEQDNIKQAIFCYTKALKYEPTNV 249
Score = 39 (18.8 bits), Expect = 1.3e-37, Sum P(3) = 1.3e-37
Identities = 9/31 (29%), Positives = 18/31 (58%)
Query: 406 IDARLTLASLLLEDAKDEEAISLLTPPMSLE 436
+D LT+ ++LL+ A + + L++ S E
Sbjct: 550 VDTLLTMLAMLLKVAMNRAQVCLISSSKSGE 580
Score = 37 (18.1 bits), Expect = 1.1e-19, Sum P(2) = 1.1e-19
Identities = 12/50 (24%), Positives = 23/50 (46%)
Query: 387 EREKSIIYFYKALQILEDNIDARLTLASLLLEDAKDEEAISLLTPPMSLE 436
+ EKS+ + A + + + + LA + LE ++AI T + E
Sbjct: 196 DMEKSLQFELIAAHLNPSDTEEWVRLAEMSLEQDNIKQAIFCYTKALKYE 245
>UNIPROTKB|Q9Y5Q9 [details] [associations]
symbol:GTF3C3 "General transcription factor 3C polypeptide
3" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IC] [GO:0000127 "transcription factor
TFIIIC complex" evidence=IDA] [GO:0003677 "DNA binding"
evidence=IC] [GO:0006383 "transcription from RNA polymerase III
promoter" evidence=IC;TAS] [GO:0042791 "5S class rRNA transcription
from RNA polymerase III type 1 promoter" evidence=IC] [GO:0042797
"tRNA transcription from RNA polymerase III promoter" evidence=IC]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] Reactome:REACT_71 InterPro:IPR001440
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF00515 Pfam:PF13181 PROSITE:PS50005 PROSITE:PS50293
SMART:SM00028 GO:GO:0003677 EMBL:CH471063 Gene3D:1.25.40.10
Reactome:REACT_1788 EMBL:AC012486 GO:GO:0042797 GO:GO:0000127
eggNOG:NOG275814 KO:K15201 GO:GO:0042791 EMBL:AF133123
EMBL:AF465407 EMBL:AK027050 EMBL:AK314718 EMBL:BC015995
EMBL:BC043347 EMBL:AL137453 IPI:IPI00015806 IPI:IPI00411594
PIR:T46268 RefSeq:NP_001193703.1 RefSeq:NP_036218.1
UniGene:Hs.470996 UniGene:Hs.737375 ProteinModelPortal:Q9Y5Q9
SMR:Q9Y5Q9 IntAct:Q9Y5Q9 STRING:Q9Y5Q9 PhosphoSite:Q9Y5Q9
DMDM:47606223 PaxDb:Q9Y5Q9 PeptideAtlas:Q9Y5Q9 PRIDE:Q9Y5Q9
Ensembl:ENST00000263956 Ensembl:ENST00000409364 GeneID:9330
KEGG:hsa:9330 UCSC:uc002uts.3 UCSC:uc002utu.3 CTD:9330
GeneCards:GC02M197592 HGNC:HGNC:4666 MIM:604888 neXtProt:NX_Q9Y5Q9
PharmGKB:PA29054 HOVERGEN:HBG057124 InParanoid:Q9Y5Q9 OMA:IHLAIHY
OrthoDB:EOG4CJVGH PhylomeDB:Q9Y5Q9 GenomeRNAi:9330 NextBio:34947
ArrayExpress:Q9Y5Q9 Bgee:Q9Y5Q9 CleanEx:HS_GTF3C3
Genevestigator:Q9Y5Q9 GermOnline:ENSG00000119041 Uniprot:Q9Y5Q9
Length = 886
Score = 272 (100.8 bits), Expect = 6.9e-37, Sum P(2) = 6.9e-37
Identities = 68/271 (25%), Positives = 135/271 (49%)
Query: 497 LIIDLCKTLASLHRYEDAIKIINLILKLGYGKFP--VEKEELYFLGAQIPCNTTDPKLWF 554
L++ +L L R+++A +++ L+ Y + +++EL + G + + +
Sbjct: 628 LLLKAIYSLCDLSRFQEAELLVDSSLEY-YSFYDDRQKRKELEYFGLSAAILDKNFRKAY 686
Query: 555 DGVRFMVKLHPHRLTTWNRYYKLVSRFEKIFSKHAKLLRNVRAKYRDFVPPIIISGHQFT 614
+ +R MV + ++ WN + ++ + + +H + + K + +++GH
Sbjct: 687 NYIRIMVMENVNKPQLWNIFNQVTMHSQDV--RHHRFCLRLMLKNPENHALCVLNGHNAF 744
Query: 615 MISHHQDAAREYLEAYKLLPENPLINLCVGTALINLALGVRLQNKHQCVAQGLAFLYNNL 674
+ + A +Y++A++ P+ PL + C+G I++A + +H + QG +FL L
Sbjct: 745 VSGSFKHALGQYVQAFRTHPDEPLYSFCIGLTFIHMASQKYVLRRHALIVQGFSFLNRYL 804
Query: 675 RLAENSQEALYNIARAYHHVGLVSLAASYYEKVLAMYQKDCIIPGFP-DHMEDWKPGHSD 733
L QE+ YN+ R H +GL+ LA YY+K L + ++ G D + D
Sbjct: 805 SLRGPCQESFYNLGRGLHQLGLIHLAIHYYQKALEL--PPLVVEGIELDQL--------D 854
Query: 734 LRREAAYNLHLIYKKSGAVDLARQVLRDHCT 764
LRR+ AYNL LIY+ SG +A+ +L +C+
Sbjct: 855 LRRDIAYNLSLIYQSSGNTGMAQTLLYTYCS 885
Score = 212 (79.7 bits), Expect = 6.9e-37, Sum P(2) = 6.9e-37
Identities = 51/217 (23%), Positives = 113/217 (52%)
Query: 75 KKRGRPEGSKKKVCPEIRRMLGDASLHYALGRYEEAISVLHEVIRLEEELPNSYHILGLV 134
KK + + + K+ +R ++G+A++ +A G EEAI + E+IR + L ++
Sbjct: 133 KKMMKEKRPRSKLPRALRGLMGEANIRFARGEREEAILMCMEIIRQAPLAYEPFSTLAMI 192
Query: 135 HDALGNTAKAMGCYWLAACYKQKDSSLWKLIFPWLIEQGDTTWAMSCLSEAVKADPNDFK 194
++ G+ K++ +AA D+ W + +EQ + A+ C ++A+K +P + +
Sbjct: 193 YEDQGDMEKSLQFELIAAHLNPSDTEEWVRLAEMSLEQDNIKQAIFCYTKALKYEPTNVR 252
Query: 195 LKFHLASLYVELGNFQRAADVYRQMVQLC-PENIEA-LKMG---AKLYQKSGQIESSVDI 249
+ +SLY ++G+ + A D YR+++ L P + E +++ AK Y ++ + S+++I
Sbjct: 253 YLWERSSLYEQMGDHKMAMDGYRRILNLLSPSDGERFMQLARDMAKSYYEANDVTSAINI 312
Query: 250 LEDYLKGHPTEADFGVIDLLASMLVQMNAYDRVLKHI 286
+++ H +++ A + + YD+ L+ I
Sbjct: 313 IDEAFSKHQGLVSMEDVNIAAELYISNKQYDKALEII 349
Score = 136 (52.9 bits), Expect = 6.4e-29, Sum P(2) = 6.4e-29
Identities = 74/349 (21%), Positives = 152/349 (43%)
Query: 140 NTAKAMGCYWLAACYKQKDSS-LWKLIFPWLIEQ-GDTTWAMSCLSEAVKA-DPND---- 192
N +A+ CY A Y+ + LW+ L EQ GD AM + P+D
Sbjct: 232 NIKQAIFCYTKALKYEPTNVRYLWERSS--LYEQMGDHKMAMDGYRRILNLLSPSDGERF 289
Query: 193 FKLKFHLASLYVELGNFQRAADVYRQMVQLCPE--NIEALKMGAKLYQKSGQIESSVDIL 250
+L +A Y E + A ++ + ++E + + A+LY + Q + +++I+
Sbjct: 290 MQLARDMAKSYYEANDVTSAINIIDEAFSKHQGLVSMEDVNIAAELYISNKQYDKALEII 349
Query: 251 EDYLKGHPTEADFGVIDLLASMLVQMNAYDRVLKHIELVDLVYYSGKELLLALKIKAGIC 310
D+ G++ L + + K E V G + + +K+ +C
Sbjct: 350 TDFS---------GIV--LEKKTSEEGTSEEN-KAPENVTCTIPDGVPIDITVKLM--VC 395
Query: 311 HIQLGNTDKAEILLTAIHWENVSDHAESINEIADLFKNRELYSTALKYYHMLEANAGVHN 370
+ L + LLT + +N D + ++A+ F + Y++AL L + +N
Sbjct: 396 LVHLNILEPLNPLLTTLVEQNPEDMGDLYLDVAEAFLDVGEYNSALPLLSALVCSER-YN 454
Query: 371 DGCLHLKIAECSLALKEREKSIIYFYKALQILEDNIDARLTLASLLLEDAKDEEAISLLT 430
+ L+ AEC AL E++ + K + + ++DAR++L++L + + E+A+ L
Sbjct: 455 LAVVWLRHAECLKALGYMERAAESYGKVVDLAPLHLDARISLSTLQQQLGQPEKALEALE 514
Query: 431 PPMSLENKYVNSDKTHAWWLNIRIKIKLCRIYKAKGMIEGFVDMLLPLV 479
P + + +A +++ + + ++G + G+VD LL ++
Sbjct: 515 PMYDPDTL---AQDANAAQQELKLLLHRSTLLFSQGKMYGYVDTLLTML 560
Score = 81 (33.6 bits), Expect = 3.6e-23, Sum P(2) = 3.6e-23
Identities = 40/177 (22%), Positives = 75/177 (42%)
Query: 170 IEQGDTTWAMSCLSEAVKADPNDFKLKF--HLASLYVELGNFQRAADVYRQMVQLCPENI 227
++ G+ A+ LS V ++ + + + H L LG +RAA+ Y ++V L P ++
Sbjct: 432 LDVGEYNSALPLLSALVCSERYNLAVVWLRHAECLKA-LGYMERAAESYGKVVDLAPLHL 490
Query: 228 EALKMGAKLYQKSGQIESSVDILEDYLKGHPTEADFGVIDLLASMLVQMNA--YDRVLKH 285
+A + L Q+ GQ E +++ LE D +L+ + + + K
Sbjct: 491 DARISLSTLQQQLGQPEKALEALEPMYDPDTLAQDANAAQQELKLLLHRSTLLFSQG-KM 549
Query: 286 IELVDLVYYSGKELLLALKIKAGICHIQLGNTDKAEILLTAIHWENVSDH--AESIN 340
VD + LL +A +C I + + + L + + +SD ES N
Sbjct: 550 YGYVDTLLTMLAMLLKVAMNRAQVCLISSSKSGERHLYLIKVSRDKISDSNDQESAN 606
Score = 43 (20.2 bits), Expect = 3.3e-19, Sum P(2) = 3.3e-19
Identities = 21/106 (19%), Positives = 52/106 (49%)
Query: 302 ALKIKAGICHIQLGNTDKAEILLTAIHWENVSDHA-ESINEIADLFKNRELYSTALKYYH 360
AL+ G +I+ ++ E +L + + A E + +A +++++ +L++
Sbjct: 148 ALRGLMGEANIRFARGEREEAILMCMEIIRQAPLAYEPFSTLAMIYEDQGDMEKSLQF-E 206
Query: 361 MLEANAGVHNDGCLHLKIAECSLALKEREKSIIYFYKALQILEDNI 406
++ A+ +D +++AE SL +++I + KAL+ N+
Sbjct: 207 LIAAHLNP-SDTEEWVRLAEMSLEQDNIKQAIFCYTKALKYEPTNV 251
Score = 37 (18.1 bits), Expect = 1.4e-18, Sum P(2) = 1.4e-18
Identities = 12/50 (24%), Positives = 23/50 (46%)
Query: 387 EREKSIIYFYKALQILEDNIDARLTLASLLLEDAKDEEAISLLTPPMSLE 436
+ EKS+ + A + + + + LA + LE ++AI T + E
Sbjct: 198 DMEKSLQFELIAAHLNPSDTEEWVRLAEMSLEQDNIKQAIFCYTKALKYE 247
>POMBASE|SPCC16C4.14c [details] [associations]
symbol:sfc4 "transcription factor TFIIIC complex
subunit Sfc4" species:4896 "Schizosaccharomyces pombe" [GO:0000127
"transcription factor TFIIIC complex" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006384 "transcription initiation from RNA
polymerase III promoter" evidence=IDA] [GO:0000995 "core RNA
polymerase III binding transcription factor activity" evidence=IDA]
[GO:0043035 "chromatin insulator sequence binding" evidence=IDA]
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF13181 PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028
PomBase:SPCC16C4.14c GO:GO:0005829 GO:GO:0006355 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0003677 Gene3D:1.25.40.10
InterPro:IPR013105 Pfam:PF07719 GO:GO:0006384 GO:GO:0000127
PIR:T41104 RefSeq:NP_587924.1 ProteinModelPortal:O74458
IntAct:O74458 STRING:O74458 EnsemblFungi:SPCC16C4.14c.1
GeneID:2539187 KEGG:spo:SPCC16C4.14c eggNOG:NOG275814 KO:K15201
OMA:KFFLRQL OrthoDB:EOG4R539Z NextBio:20800358 Uniprot:O74458
Length = 1006
Score = 206 (77.6 bits), Expect = 2.2e-27, Sum P(3) = 2.2e-27
Identities = 59/168 (35%), Positives = 81/168 (48%)
Query: 606 IIISGHQFTMISHHQDAAREYLEAYKLLPENPLINLCVGTALINLALGVRLQNKHQCVAQ 665
+++ GH A Y A+ + P+ P+ NL +G A ++ A+ N+H + Q
Sbjct: 844 VLLYGHIMARNRSWIPAINYYSRAFAINPDCPITNLSLGLAYLHRAMQRLSDNRHYQILQ 903
Query: 666 GLAFLYN--NLRLAEN---SQEALYNIARAYHHVGLVSLAASYYEKVLA---MYQKDCII 717
G FLY +LR+ E QEALYN+ +AYH +GL A YYE VL M Q D +
Sbjct: 904 GFTFLYRYYDLRVNEGLGEKQEALYNLGKAYHFIGLEHYAVKYYEAVLGLSPMSQGDKMT 963
Query: 718 PGFPDHMEDWKPGHSDLRREAAYNLHLIYKKSGAVDLARQVLRDHCTF 765
E D EAAYNL LIY SG + LA Q+ + F
Sbjct: 964 SS-----ESTVSTTYDFGFEAAYNLRLIYICSGNIKLAFQISSKYLIF 1006
Score = 151 (58.2 bits), Expect = 2.2e-27, Sum P(3) = 2.2e-27
Identities = 53/190 (27%), Positives = 96/190 (50%)
Query: 77 RGRPEGSKKKVCP--EIRRMLGDASLHYAL-GRYEEAISVLHEVIRLEEELPNSYHILGL 133
+GR S+ + P E+++ML A+ +A G ++EA + E++R++ + ++ +LG
Sbjct: 116 KGRGRVSRADMLPSVEVQQMLSLANHLFAQEGNFDEAQKLAEEIVRIDNNVIAAWKMLGE 175
Query: 134 VHDALGN-TAKAMGCY--WLAACY-KQKDSSLWKLIFPWLIEQGDTTWAMS--CLSEAVK 187
H GN C W+AA + K KD LW + + W + C + AV
Sbjct: 176 CHRQRGNGRVNIEKCLIAWMAAAHLKPKDHELWFTCAK--LSESLEFWDQADYCYNRAVS 233
Query: 188 ADP-NDFKLKFHL---ASLYVELGNFQRAADVYRQMVQLCPENIEALKMGAKLYQKSGQI 243
A P N +LK ++ + L E G+ ++AA+ ++ ++Q P N LK A++Y K I
Sbjct: 234 AKPPNKSELKKYIWNRSVLNKEHGSLKKAAEGFKFLLQSSPYNASILKNLAEIYIK---I 290
Query: 244 ESSVDILEDY 253
+ +IL+ +
Sbjct: 291 HAPREILKQF 300
Score = 88 (36.0 bits), Expect = 2.2e-27, Sum P(3) = 2.2e-27
Identities = 38/143 (26%), Positives = 69/143 (48%)
Query: 294 YSGKELLLA---LKIKAGICHIQLGNTDKAEILLTAIHWENVS-DHAES-INEIADLFKN 348
++ KE L + K GI ++ G +AE+ + I +N+ D+A + +IA + +
Sbjct: 386 HTNKEAYLLPHLFRTKLGIARLKTGELPEAELHFSVI--KNLPPDYAWGMLYDIAKAYMD 443
Query: 349 RELYSTALKYYHMLEANAGVHNDGCLHLKIAECSLALKEREKSIIYFYKALQILEDNIDA 408
E AL+Y+ ++ + N G L + C L LKE E + L + N +A
Sbjct: 444 IERLDLALEYFVLICNHEPAQNIG-LWYNMGVCYLELKEYEHAQQCMEAILIVDNSNTNA 502
Query: 409 RLTLASLL-LEDAKDEEAISLLT 430
+ LA + L+D +D A+ ++T
Sbjct: 503 LIKLAEINELQDNRDA-ALEIVT 524
Score = 74 (31.1 bits), Expect = 3.1e-14, Sum P(3) = 3.1e-14
Identities = 37/152 (24%), Positives = 63/152 (41%)
Query: 185 AVKADPNDFKLKFHLASLYVELGNFQRAADVYRQMVQLCPENIEALKM----GAKLYQKS 240
A P D +L F A L L + +A Y + V P N LK + L ++
Sbjct: 197 AAHLKPKDHELWFTCAKLSESLEFWDQADYCYNRAVSAKPPNKSELKKYIWNRSVLNKEH 256
Query: 241 GQIESSVDILEDYLKGHPTEADFGVIDLLASMLVQMNAYDRVLKHIELVDLVYYSGKELL 300
G ++ + + + L+ P A ++ LA + ++++A +LK E+ +Y
Sbjct: 257 GSLKKAAEGFKFLLQSSPYNAS--ILKNLAEIYIKIHAPREILKQFEIAWKYFYQYP--- 311
Query: 301 LALKIKAGICHIQLGNTDKAEILLTAIHWENV 332
A I I + N AE+LL W N+
Sbjct: 312 -APPIGNDIFDLPTLNL-YAELLLLDHQWSNL 341
Score = 68 (29.0 bits), Expect = 2.5e-25, Sum P(3) = 2.5e-25
Identities = 34/135 (25%), Positives = 61/135 (45%)
Query: 304 KIKAGICHIQLGNTDKAEILLTAIHWENVSDHAES-INEIADLFKNRELYSTALKYY--- 359
+ K GI ++ G +AE+ + I D+A + +IA + + E AL+Y+
Sbjct: 399 RTKLGIARLKTGELPEAELHFSVIK-NLPPDYAWGMLYDIAKAYMDIERLDLALEYFVLI 457
Query: 360 --HMLEANAGV-HNDGCLHLKIAECSLALKEREKSIIY-------FYKALQI--LEDNID 407
H N G+ +N G +L++ E A + E +I K +I L+DN D
Sbjct: 458 CNHEPAQNIGLWYNMGVCYLELKEYEHAQQCMEAILIVDNSNTNALIKLAEINELQDNRD 517
Query: 408 ARLTLASLLLEDAKD 422
A L + + + E ++
Sbjct: 518 AALEIVTNIFEQRRN 532
Score = 57 (25.1 bits), Expect = 1.4e-23, Sum P(4) = 1.4e-23
Identities = 27/123 (21%), Positives = 62/123 (50%)
Query: 231 KMG-AKLYQKSGQIESSVDILEDYLKGHPTEADFGVIDLLASMLVQMNAYDRVLKHIELV 289
K+G A+L K+G++ + ++ +K P + +G++ +A + + D L++ L+
Sbjct: 401 KLGIARL--KTGELPEA-ELHFSVIKNLPPDYAWGMLYDIAKAYMDIERLDLALEYFVLI 457
Query: 290 DLVYYSGKELLLALKIKAGICHIQLGNTDKAEILLTAIHW-ENVSDHAE-SINEIADLFK 347
+ + + L G+C+++L + A+ + AI +N + +A + EI +L
Sbjct: 458 -CNHEPAQNI--GLWYNMGVCYLELKEYEHAQQCMEAILIVDNSNTNALIKLAEINELQD 514
Query: 348 NRE 350
NR+
Sbjct: 515 NRD 517
Score = 47 (21.6 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 684 LYNIARAYHHVGLVSLAASYY 704
LY+IA+AY + + LA Y+
Sbjct: 434 LYDIAKAYMDIERLDLALEYF 454
Score = 37 (18.1 bits), Expect = 1.4e-23, Sum P(4) = 1.4e-23
Identities = 14/57 (24%), Positives = 27/57 (47%)
Query: 398 ALQILEDNIDARLTLASLLLEDAKDEEAISLLTPPMSLENKYVNSDKTHAWWLNIRI 454
AL+I+ + + R + L E +++E+ + + + N+ V DK W RI
Sbjct: 519 ALEIVTNIFEQRRNINELEREQSQNEDHEKNVGSQLFVGNQKVPQDK---WEKRARI 572
Score = 37 (18.1 bits), Expect = 1.7e-10, Sum P(3) = 1.7e-10
Identities = 10/56 (17%), Positives = 28/56 (50%)
Query: 195 LKFHLASLYVELGNFQRAADVYRQMVQLCPENIEALKMGAKLYQKSGQIESSVDIL 250
L +++ Y+EL ++ A ++ + N AL A++ + +++++I+
Sbjct: 468 LWYNMGVCYLELKEYEHAQQCMEAILIVDNSNTNALIKLAEINELQDNRDAALEIV 523
>ZFIN|ZDB-GENE-040914-80 [details] [associations]
symbol:gtf3c3 "general transcription factor IIIC,
polypeptide 3" species:7955 "Danio rerio" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF13181 PROSITE:PS50005
PROSITE:PS50293 ZFIN:ZDB-GENE-040914-80 Gene3D:1.25.40.10
GeneTree:ENSGT00390000016929 EMBL:CABZ01062045 EMBL:CABZ01062046
IPI:IPI00555472 Ensembl:ENSDART00000127329 ArrayExpress:F1RDA7
Bgee:F1RDA7 Uniprot:F1RDA7
Length = 334
Score = 293 (108.2 bits), Expect = 3.5e-26, Sum P(2) = 3.5e-26
Identities = 74/257 (28%), Positives = 131/257 (50%)
Query: 510 RYEDAIKIINLILKLGYGKFP--VEKEELYFLGAQIPCNTTDPKLWFDGVRFMVKLHPHR 567
R+ +A +++ L+ Y + V+++EL +LG + + ++ +R M+ R
Sbjct: 89 RFAEAELLVDSTLEY-YSFYDDRVKRKELEYLGLSAAFLDHNFRTAYNYIRLMLMDSVER 147
Query: 568 LTTWNRYYKLVSRFEKIFSKHAKLLRNVRAKYRDFVPPIIISGHQFTMISHHQDAAREYL 627
WN + ++ + ++H + + K+ D +++GH + + A +Y+
Sbjct: 148 PQLWNVFNQITLHSQD--ARHHRFCLRLMLKHPDNHALYLLNGHTSLVSGTFKHALGQYM 205
Query: 628 EAYKLLPENPLINLCVGTALINLALGVRLQNKHQCVAQGLAFLYNNLRLAENSQEALYNI 687
+A++ P++PL +L +G ++A + +H QG +FL+ + L QE+LYN+
Sbjct: 206 QAFRNEPDHPLHSLAIGLTFFHMACQKFVMKRHSLTVQGFSFLWRYVDLRGQCQESLYNL 265
Query: 688 ARAYHHVGLVSLAASYYEKVLAMYQKDCIIPGFPDHMEDWKPGHSDLRREAAYNLHLIYK 747
RA H +GL LA YYEK L + P P ME + DLRRE AYNL LIY+
Sbjct: 266 GRALHQLGLTHLAIHYYEKALTL-------P--PLKMEGIEDDQVDLRREIAYNLSLIYQ 316
Query: 748 KSGAVDLARQVLRDHCT 764
SG D+AR ++ +CT
Sbjct: 317 SSGNKDMARHIIYTYCT 333
Score = 37 (18.1 bits), Expect = 3.5e-26, Sum P(2) = 3.5e-26
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 402 LEDNIDARLTLASLLLEDA 420
++D ID LT+ S+ L+ A
Sbjct: 1 MDDYIDTVLTMLSMFLKVA 19
>ASPGD|ASPL0000055827 [details] [associations]
symbol:AN0407 species:162425 "Emericella nidulans"
[GO:0006384 "transcription initiation from RNA polymerase III
promoter" evidence=IEA] [GO:0043035 "chromatin insulator sequence
binding" evidence=IEA] [GO:0000995 "core RNA polymerase III binding
transcription factor activity" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0000127 "transcription factor TFIIIC complex"
evidence=IEA] InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028
EMBL:BN001308 EMBL:AACD01000007 Gene3D:1.25.40.10 eggNOG:NOG275814
KO:K15201 OMA:KFFLRQL RefSeq:XP_658011.1 ProteinModelPortal:Q5BGC3
EnsemblFungi:CADANIAT00002292 GeneID:2876183 KEGG:ani:AN0407.2
HOGENOM:HOG000211033 OrthoDB:EOG441TKZ Uniprot:Q5BGC3
Length = 1077
Score = 188 (71.2 bits), Expect = 7.3e-24, Sum P(3) = 7.3e-24
Identities = 57/237 (24%), Positives = 114/237 (48%)
Query: 57 GFGSRKRSR-EASKKYPSLKKRGRPEGSKKKV--CPEIRRMLGDASLHYALGRYEEAISV 113
G R+R R S ++ + +G G +K V PE + + +A+ + G Y+ AI +
Sbjct: 116 GLRRRRRRRGRFSGRFGARGGKGIKRGPRKPVEPSPEFKLLHSEATSAFIDGDYDRAIDL 175
Query: 114 LHEVIRLEEELPNSYHILGLVHDALGNTAKAMGCYWLAACYKQKDSSLWKLIFPWLIEQ- 172
+ I++ E+ ++ +L + A G KA+ + A + +D+++W + + EQ
Sbjct: 176 VRRAIQVNPEMFAAHSLLSEIFLAQGEKEKAVTALFSGAHTRPRDTTVWLKVARMITEQA 235
Query: 173 GDTTWA-----MSCLSEAVKADPNDFKLKFHLASLYVELGNFQRAADVYRQMVQLCPENI 227
GD A + C S ++ DP + +F A+LY LG+ RA Y ++++ P N+
Sbjct: 236 GDDRQAVLNDVLYCYSRVLEIDPQNHNTRFQRAALYRGLGHNGRAVTEYERILRDLPHNV 295
Query: 228 EALKMGAKLYQKSGQIESSVDI----LEDYLKGHPTEA-DFGVIDLLASMLVQMNAY 279
AL++ + Q + ++D ++ Y+ P E +F D A++ +++ Y
Sbjct: 296 RALRLLTDTLSEQNQYQKALDYWSESIQHYMAQEPEETPEFTWSD--ANIYIELYTY 350
Score = 131 (51.2 bits), Expect = 7.3e-24, Sum P(3) = 7.3e-24
Identities = 33/110 (30%), Positives = 55/110 (50%)
Query: 606 IIISGHQFTMISHHQDAAREYLEAYKLLPENPLINLCVGTALINLALGVRLQNKHQCVAQ 665
+++ GH + A + AY L +NP + L +G I+ ++ + +N+H + Q
Sbjct: 867 LVLYGHILYSGNSFYPALNYFFRAYALDDKNPAVLLSIGLCYIHHSMKRQSENRHFQIMQ 926
Query: 666 GLAFLYNNLRLAENS-------QEALYNIARAYHHVGLVSLAASYYEKVL 708
GL+F+ RL E QE +N AR +H +GL LA Y++VL
Sbjct: 927 GLSFMNEYKRLRERKGTPLVERQEMEFNFARVWHTLGLAHLAVEGYQRVL 976
Score = 94 (38.1 bits), Expect = 7.3e-24, Sum P(3) = 7.3e-24
Identities = 41/184 (22%), Positives = 80/184 (43%)
Query: 296 GKELLLALKIKAGICHIQLGNTDKAEILLTAIHW---ENVSD------HAESINEIADLF 346
G L L +IK G+ ++L E L W E+ SD + + E AD
Sbjct: 412 GPGLPLEFRIKLGLFRLKLPERHINEAL-HHFRWLKPEDTSDGSLVYDYGDLFREAADAL 470
Query: 347 KNRELYSTALKYYHMLEANAGVHNDGCLHLKIAECSLALKEREKSIIYFYKALQILEDNI 406
K+ E++ AL++Y ++ + D + + +C +L E E + + + NI
Sbjct: 471 KDAEMFEDALRFYRPIQKTE--YADVSFFMAMGDCFKSLGELEDAENCYLTVAEHDTSNI 528
Query: 407 DARLTLASLLLEDAKDEEAISLLTPPMSLENKYVNSDKTHAWWLNIRIKIKLCRIYKAKG 466
++R+ LA L E+A+ + + L + S++ + R++ +L R +K+
Sbjct: 529 ESRVQLAKLYESIGMTEQALRYVNDAVLLGRQEHRSNRRRK---DTRLE-ELAREFKSVN 584
Query: 467 MIEG 470
+ G
Sbjct: 585 VAAG 588
Score = 61 (26.5 bits), Expect = 6.9e-05, Sum P(3) = 6.9e-05
Identities = 16/66 (24%), Positives = 28/66 (42%)
Query: 187 KADPNDFKLKFHLASLYVELGNFQRAADVYRQMVQLCPENIEALKMGAKLYQKSGQIESS 246
K + D + + LG + A + Y + + NIE+ AKLY+ G E +
Sbjct: 488 KTEYADVSFFMAMGDCFKSLGELEDAENCYLTVAEHDTSNIESRVQLAKLYESIGMTEQA 547
Query: 247 VDILED 252
+ + D
Sbjct: 548 LRYVND 553
Score = 48 (22.0 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 12/49 (24%), Positives = 23/49 (46%)
Query: 375 HLKIAECSLALKEREKSIIYFYKALQILEDNIDARLTLASLLLEDAKDE 423
H ++E LA E+EK++ + + L +A ++ E A D+
Sbjct: 190 HSLLSEIFLAQGEKEKAVTALFSGAHTRPRDTTVWLKVARMITEQAGDD 238
Score = 37 (18.1 bits), Expect = 6.9e-05, Sum P(3) = 6.9e-05
Identities = 13/34 (38%), Positives = 16/34 (47%)
Query: 254 LKGHPTEADFGVIDLLASMLVQMNAYDRVLK-HI 286
L G P + F L+ ML Q+ A D L HI
Sbjct: 794 LSGDPHRSLFHSSPLMKFMLRQIKAIDFTLPDHI 827
>CGD|CAL0004061 [details] [associations]
symbol:TFC4 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0000127 "transcription factor TFIIIC
complex" evidence=IEA] [GO:0001041 "transcription from a RNA
polymerase III hybrid type promoter" evidence=IEA] [GO:0042791 "5S
class rRNA transcription from RNA polymerase III type 1 promoter"
evidence=IEA] [GO:0006384 "transcription initiation from RNA
polymerase III promoter" evidence=IEA] [GO:0001009 "transcription
from RNA polymerase III type 2 promoter" evidence=IEA] [GO:0001005
"RNA polymerase III type 1 promoter sequence-specific DNA binding
TFIIIB recruiting transcription factor activity" evidence=IEA]
[GO:0001002 "RNA polymerase III type 1 promoter sequence-specific
DNA binding" evidence=IEA] [GO:0043035 "chromatin insulator
sequence binding" evidence=IEA] [GO:0001008 "RNA polymerase III
type 2 promoter sequence-specific DNA binding TFIIIB recruiting
transcription factor activity" evidence=IEA] [GO:0001003 "RNA
polymerase III type 2 promoter sequence-specific DNA binding"
evidence=IEA] [GO:0000995 "core RNA polymerase III binding
transcription factor activity" evidence=IEA] [GO:0008301 "DNA
binding, bending" evidence=IEA] InterPro:IPR001440
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF00515 Pfam:PF13176 PROSITE:PS50005 PROSITE:PS50293
SMART:SM00028 CGD:CAL0004061 Gene3D:1.25.40.10 InterPro:IPR013105
Pfam:PF07719 EMBL:AACQ01000027 eggNOG:NOG275814 KO:K15201
RefSeq:XP_719972.1 ProteinModelPortal:Q5AEJ4 STRING:Q5AEJ4
GeneID:3638420 KEGG:cal:CaO19.274 Uniprot:Q5AEJ4
Length = 1057
Score = 184 (69.8 bits), Expect = 3.7e-23, Sum P(3) = 3.7e-23
Identities = 49/146 (33%), Positives = 83/146 (56%)
Query: 626 YLE-AYKLLPENPLINLCVGTALINLALGVRLQNKHQCVAQGLAFL--YNNLRLAENS-- 680
YL AYK ++P++ L +G ++ ++ N+H + QG++++ Y LR +
Sbjct: 915 YLNRAYKQYNQDPMLCLILGLGHLHRSMQRLSANRHIQLLQGISYILEYKKLRQLNATIY 974
Query: 681 --QEALYNIARAYHHVGLVSLAASYYEKVLAMYQKDCIIPGFPDHMEDWKPGHSDLRREA 738
QE YN+ R +H +GL +LA +YE+VLAM KD I+ D+ ++++ D+ EA
Sbjct: 975 ELQEIEYNLGRLFHTLGLFTLAVRHYEQVLAM--KDDIVNSSKDNNDNYE---YDMSWEA 1029
Query: 739 AYNLHLIYKKSGAVDLARQVLRDHCT 764
AYNL LIY G LA++++ + T
Sbjct: 1030 AYNLSLIYNIDGNPKLAKEIIDKYLT 1055
Score = 159 (61.0 bits), Expect = 3.7e-23, Sum P(3) = 3.7e-23
Identities = 55/224 (24%), Positives = 97/224 (43%)
Query: 42 QDNDDERRRFEAIIFG---FGSRKRSREASKKYPSLKKRGRPEGSKKKVCPEIRRMLGDA 98
+D+ DE F+ + G F R R + SK S KR +++ PE+R L A
Sbjct: 136 EDDYDEDYNFKDALKGASNFRVRNRREKISKNSRSYYKRKMMRADNRELDPEVRSNLSQA 195
Query: 99 SLHYALGRYEEAISVLHEVIRLEEELPNSYHILGLVHDALGNTAKAMGCYWL-AACYKQK 157
+ + + A + EVI+ + + ++Y LG + A G + YWL AA
Sbjct: 196 NEAFVRKDLQVAQQLYLEVIKKDPKNFSAYKALGEISKAQGQLNECCN-YWLLAANIHPW 254
Query: 158 DSSLWKLIFPWLIEQGDTTWAMSCLSEAVKAD-PNDFKLKFHLASLYVELGNFQRAADVY 216
D+ W + E G A+ C A+ D + A LY E + +A D +
Sbjct: 255 DTEFWGQVAQLSAELGHIDQAVYCYGRAITPDIAKSCEFILQRAILYQERKQYGKALDGF 314
Query: 217 RQMVQLCPENIEALKMGAKLYQKSGQIESSVDILEDYLKG--HP 258
+++ QL P++ +K A +Y + ++ ++++ L HP
Sbjct: 315 QKVRQLYPKDSNIIKYLASVYSEQKRLNDAINLYMKVLDSNIHP 358
Score = 69 (29.3 bits), Expect = 3.7e-12, Sum P(2) = 3.7e-12
Identities = 20/74 (27%), Positives = 36/74 (48%)
Query: 169 LIEQGDTTWAMSCLSEAVKADPNDFKLKFHLASL----YVELGNFQRAADVYRQMVQLCP 224
L E G A+ LS+A ++ +F + L L Y E+G++ + Y ++Q P
Sbjct: 491 LEEHGHYEDALKFLSKA--SEDEEFTISLELVQLLAKCYFEVGDYHESKQAYETLLQHDP 548
Query: 225 ENIE-ALKMGAKLY 237
+N++ L + LY
Sbjct: 549 DNLDFKLSLAENLY 562
Score = 63 (27.2 bits), Expect = 3.7e-23, Sum P(3) = 3.7e-23
Identities = 36/144 (25%), Positives = 65/144 (45%)
Query: 289 VDLVYYSGKELLLALKIKAGICHIQLGNTDKA-EILLTAIHWENVSD-HAESINEIADLF 346
+DL +L + ++ K G + L D A + + ++VSD H E+ L
Sbjct: 436 IDLAENKPFDLPIDIRFKLGCLRLGLQQKDVAVQHFDYLLEEQDVSDLHFEA----GKLL 491
Query: 347 KNRELYSTALKYYHMLEANAGVHNDGCLHLK--IAECSLALKEREKSIIYFYKALQILED 404
+ Y ALK+ + +A+ L L +A+C + + +S + LQ D
Sbjct: 492 EEHGHYEDALKF--LSKASEDEEFTISLELVQLLAKCYFEVGDYHESKQAYETLLQHDPD 549
Query: 405 NIDARLTLASLL--LEDAKDEEAI 426
N+D +L+LA L LED+ +++
Sbjct: 550 NLDFKLSLAENLYYLEDSAGAQSL 573
Score = 52 (23.4 bits), Expect = 3.4e-12, Sum P(3) = 3.4e-12
Identities = 15/67 (22%), Positives = 32/67 (47%)
Query: 208 NFQRAADVYRQMVQLCPENIEALKMGAKLYQKSGQIESSVDILEDYLKGHPTEADF-GVI 266
+ Q A +Y ++++ P+N A K ++ + GQ+ + HP + +F G +
Sbjct: 203 DLQVAQQLYLEVIKKDPKNFSAYKALGEISKAQGQLNECCNYWLLAANIHPWDTEFWGQV 262
Query: 267 DLLASML 273
L++ L
Sbjct: 263 AQLSAEL 269
Score = 48 (22.0 bits), Expect = 2.0e-07, Sum P(3) = 2.0e-07
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 729 PGHSDLRREAAYNLHLIYKKSGAVDLARQV 758
P + D + A NL+ + +GA L RQV
Sbjct: 548 PDNLDFKLSLAENLYYLEDSAGAQSLIRQV 577
Score = 46 (21.3 bits), Expect = 2.1e-21, Sum P(3) = 2.1e-21
Identities = 25/118 (21%), Positives = 54/118 (45%)
Query: 244 ESSVDILEDYLKGHPTEADF--GVIDL-LASMLVQMNAYDRVLKHIELVDLVYYSGKELL 300
+ +D+ E+ P + F G + L L V + +D +L+ ++ DL + +GK L
Sbjct: 433 QDQIDLAENKPFDLPIDIRFKLGCLRLGLQQKDVAVQHFDYLLEEQDVSDLHFEAGKLLE 492
Query: 301 LALKIKAGICHIQLGNTDKAEILLTAIHWENVSDHAESINEIADLFKNRELYSTALKY 358
+ + + + D+ E ++ E V A+ E+ D ++++ Y T L++
Sbjct: 493 EHGHYEDALKFLSKASEDE-EFTISL---ELVQLLAKCYFEVGDYHESKQAYETLLQH 546
Score = 45 (20.9 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 11/38 (28%), Positives = 18/38 (47%)
Query: 226 NIEALKMGAKLYQKSGQIESSVDILEDYLKGHPTEADF 263
++E +++ AK Y + G S E L+ P DF
Sbjct: 516 SLELVQLLAKCYFEVGDYHESKQAYETLLQHDPDNLDF 553
Score = 42 (19.8 bits), Expect = 1.5e-08, Sum P(3) = 1.5e-08
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 680 SQEALYNIARAYHHVGLVSLAASYYEKVLAM 710
S EA YN++ Y+ G LA +K L +
Sbjct: 1026 SWEAAYNLSLIYNIDGNPKLAKEIIDKYLTI 1056
Score = 41 (19.5 bits), Expect = 1.2e-09, Sum P(4) = 1.2e-09
Identities = 12/44 (27%), Positives = 22/44 (50%)
Query: 313 QLGNTDKAEILLTAIHWENVSDHAESINEIADLFKNRELYSTAL 356
+LG+ D+A +++ E I + A L++ R+ Y AL
Sbjct: 268 ELGHIDQAVYCYGRAITPDIAKSCEFILQRAILYQERKQYGKAL 311
Score = 39 (18.8 bits), Expect = 4.7e-09, Sum P(2) = 4.7e-09
Identities = 19/86 (22%), Positives = 34/86 (39%)
Query: 195 LKFHLASLYVELGNFQRAADVYRQMVQLCPENIEALKMGA-KLYQKSGQIESSVDILEDY 253
++F L L LG Q+ V L +++ L A KL ++ G E ++ L
Sbjct: 450 IRFKLGCL--RLGLQQKDVAVQHFDYLLEEQDVSDLHFEAGKLLEEHGHYEDALKFLSKA 507
Query: 254 LKGHPTEADFGVIDLLASMLVQMNAY 279
+ ++ LLA ++ Y
Sbjct: 508 SEDEEFTISLELVQLLAKCYFEVGDY 533
Score = 38 (18.4 bits), Expect = 1.4e-20, Sum P(3) = 1.4e-20
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 608 ISGHQFTMISHHQDAAREYLEAYKLLPEN 636
++ F + QD + + EA KLL E+
Sbjct: 466 VAVQHFDYLLEEQDVSDLHFEAGKLLEEH 494
>UNIPROTKB|G4N851 [details] [associations]
symbol:MGG_06314 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001440 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF00515 PROSITE:PS50005 PROSITE:PS50293
SMART:SM00028 Gene3D:1.25.40.10 EMBL:CM001234 KO:K15201
RefSeq:XP_003717271.1 ProteinModelPortal:G4N851
EnsemblFungi:MGG_06314T0 GeneID:2684469 KEGG:mgr:MGG_06314
Uniprot:G4N851
Length = 1071
Score = 159 (61.0 bits), Expect = 2.5e-20, Sum P(3) = 2.5e-20
Identities = 49/149 (32%), Positives = 75/149 (50%)
Query: 619 HQDAAREYLEAYKLLPENPLINLCVGTALINLALGVRLQNKHQCVAQGLAFLY----NNL 674
+Q A +L A + P+NP INL +G A I+ AL + N+ + QG ++++ +
Sbjct: 919 YQYALAYFLRARTVDPDNPAINLVIGLAYIHWALKRQSHNRQYTLMQGFSYIFKYYEDRT 978
Query: 675 RLA---ENSQEALYNIARAYHHVGLVSLAASYYEKVL--AMYQKDCIIPGFPDHMEDWKP 729
R A E QEA YN+AR YH +G+ LA YY KVL A + ++ G +
Sbjct: 979 RGAAAPEERQEAHYNVARTYHLLGIHDLALEYYHKVLVEARAARTEVLRGKDVSVRR--- 1035
Query: 730 GHSDLRREAAYNLHLIYKKSGAVDLARQV 758
DL E+A N+ +G ++ AR V
Sbjct: 1036 -REDLSLESAMNIRTYCLSTGDLEGARAV 1063
Score = 112 (44.5 bits), Expect = 2.5e-20, Sum P(3) = 2.5e-20
Identities = 50/207 (24%), Positives = 91/207 (43%)
Query: 42 QDNDDERRRFEAIIFGFGSRKRSREASKKYPSLKKRGRP--EGSKK-KVCPEIRRMLGDA 98
Q++DDE I G ++ R+ K+ P ++K G P + +K K P ++L DA
Sbjct: 87 QEDDDED-----IYDGLPTKPPPRKKVKRGPVVRK-GPPIKKAPRKAKELPTEIKVLVDA 140
Query: 99 SLH-YALGRYEEAISVLHEVIRLEEELPNSYHILGLVHDALGNTAKAMGCYWLAACYKQK 157
+ + + RY+EA+ E IRL E+ ++ IL V++ + A+ + A +
Sbjct: 141 ATNAFIANRYDEALQAARETIRLNAEVAPAWGILAAVYEEREDWRHALEAKRIQASLTKG 200
Query: 158 DSSLW----KLIFPWLI-------EQGDTTW--AMSCLSEAVKADPNDFKLKFHLASLYV 204
D+ LW L + E+ D T AM C ++ D + + A +
Sbjct: 201 DTQLWLGTADLALHMVDGAYQDSPEEIDKTLKVAMDCYRSVLQIDKTNPVARLGKADILA 260
Query: 205 ELGNFQRAADVYRQMVQLCPENIEALK 231
+LG +A Y ++ P N+ ++
Sbjct: 261 DLGQSSKAVAAYLDYLKQKPYNLRVVR 287
Score = 109 (43.4 bits), Expect = 2.5e-20, Sum P(3) = 2.5e-20
Identities = 34/113 (30%), Positives = 53/113 (46%)
Query: 337 ESINEIADLFKNRELYSTALKYYHMLEANAGVHNDGCLHLKIAECSLALKEREKSIIYFY 396
E E+AD A+ YY + G D ++K A+C + L + + F
Sbjct: 450 EIAKEVADQLCESGKPERAILYYDLYRDLVGEALDAEYYVKRAKCHVQLADGPAAEDCFI 509
Query: 397 KALQILEDNIDARLTLASLLLEDAKDEEAISLLTPPMSLE-NKYVNSDKTHAW 448
AL++ EDNI+AR LA + E + +EA L+ +SLE + V TH +
Sbjct: 510 YALEVDEDNIEARYELAKMYEEAQERDEAFRLVGEALSLEAGQSVYDGLTHRY 562
Score = 68 (29.0 bits), Expect = 4.0e-16, Sum P(3) = 4.0e-16
Identities = 29/117 (24%), Positives = 53/117 (45%)
Query: 269 LASMLVQMNAYDRVLKHIELV-DLVYYSGKELLLALKIKAGICHIQLGNTDKAE-ILLTA 326
+A L + +R + + +L DLV G+ L +K CH+QL + AE + A
Sbjct: 455 VADQLCESGKPERAILYYDLYRDLV---GEALDAEYYVKRAKCHVQLADGPAAEDCFIYA 511
Query: 327 IHWENVSDHAESINEIADLFKNRELYSTALKYYH---MLEANAGVHNDGCLHLKIAE 380
+ + D+ E+ E+A +++ + A + LEA V+ DG H + +
Sbjct: 512 LEVDE--DNIEARYELAKMYEEAQERDEAFRLVGEALSLEAGQSVY-DGLTHRYVVD 565
Score = 54 (24.1 bits), Expect = 2.2e-14, Sum P(3) = 2.2e-14
Identities = 17/48 (35%), Positives = 24/48 (50%)
Query: 212 AADVYRQMVQLCPENIEALKMG-AKLYQKSGQIESSVDILEDYLKGHP 258
A D YR ++Q+ N A ++G A + GQ +V DYLK P
Sbjct: 234 AMDCYRSVLQIDKTNPVA-RLGKADILADLGQSSKAVAAYLDYLKQKP 280
Score = 53 (23.7 bits), Expect = 3.2e-07, Sum P(3) = 3.2e-07
Identities = 19/75 (25%), Positives = 37/75 (49%)
Query: 200 ASLYVELGNFQRAADVYRQMVQLCPENIEALKMGAKLYQKSGQIESSVDILEDYLKGHPT 259
A +V+L + A D + +++ +NIEA AK+Y+++ + + + ++ + L
Sbjct: 492 AKCHVQLADGPAAEDCFIYALEVDEDNIEARYELAKMYEEAQERDEAFRLVGEALS---L 548
Query: 260 EADFGVIDLLASMLV 274
EA V D L V
Sbjct: 549 EAGQSVYDGLTHRYV 563
Score = 40 (19.1 bits), Expect = 6.4e-06, Sum P(3) = 6.4e-06
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 102 YALGRYEEAISVLHEVIRLEEELPNSYHILGLVHDAL 138
YAL E+ I +E+ ++ EE LV +AL
Sbjct: 510 YALEVDEDNIEARYELAKMYEEAQERDEAFRLVGEAL 546
Score = 39 (18.8 bits), Expect = 3.6e-13, Sum P(3) = 3.6e-13
Identities = 7/28 (25%), Positives = 15/28 (53%)
Query: 291 LVYYSGKELLLALKIKAGICHIQLGNTD 318
+VY K+ L+ + + C +Q G+ +
Sbjct: 772 IVYGKAKDSLMLIHLAWASCAVQAGDEE 799
>SGD|S000003279 [details] [associations]
symbol:TFC4 "Subunit of TFIIIC RNA pol III transcription
initiation factor complex" species:4932 "Saccharomyces cerevisiae"
[GO:0001002 "RNA polymerase III type 1 promoter sequence-specific
DNA binding" evidence=IDA] [GO:0001005 "RNA polymerase III type 1
promoter sequence-specific DNA binding TFIIIB recruiting
transcription factor activity" evidence=IDA] [GO:0001009
"transcription from RNA polymerase III type 2 promoter"
evidence=IMP;IDA] [GO:0000127 "transcription factor TFIIIC complex"
evidence=IDA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0001041
"transcription from a RNA polymerase III hybrid type promoter"
evidence=IDA] [GO:0042791 "5S class rRNA transcription from RNA
polymerase III type 1 promoter" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008301 "DNA binding, bending"
evidence=IDA] [GO:0001003 "RNA polymerase III type 2 promoter
sequence-specific DNA binding" evidence=IDA] [GO:0001008 "RNA
polymerase III type 2 promoter sequence-specific DNA binding TFIIIB
recruiting transcription factor activity" evidence=IDA]
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF13174 PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028
SGD:S000003279 GO:GO:0006355 EMBL:BK006941 GO:GO:0003677
Gene3D:1.25.40.10 RefSeq:NP_011561.3 GeneID:852938 KEGG:sce:YGR047C
KO:K15026 EMBL:DQ115391 RefSeq:NP_011568.3 GeneID:852945
KEGG:sce:YGR054W Reactome:REACT_83470 Reactome:REACT_87991
GO:GO:0000127 eggNOG:NOG275814 KO:K15201 OMA:KFFLRQL
OrthoDB:EOG4R539Z GO:GO:0000999 GO:GO:0001021 GO:GO:0001041
EMBL:L12722 EMBL:Z72832 EMBL:Z72833 PIR:A47453
ProteinModelPortal:P33339 SMR:P33339 DIP:DIP-230N IntAct:P33339
MINT:MINT-402608 STRING:P33339 PaxDb:P33339 PRIDE:P33339
EnsemblFungi:YGR047C CYGD:YGR047c GeneTree:ENSGT00390000016929
HOGENOM:HOG000248222 NextBio:972675 Genevestigator:P33339
GermOnline:YGR047C Uniprot:P33339
Length = 1025
Score = 157 (60.3 bits), Expect = 3.2e-19, Sum P(4) = 3.2e-19
Identities = 48/197 (24%), Positives = 91/197 (46%)
Query: 65 REASK-KYPSLKK--RGRPEGSKKK---VCPEIRRMLGDASLHYALGRYEEAISVLHEVI 118
REAS K KK +G+ G ++K + PE+ ++L A+ + + A + +EVI
Sbjct: 96 REASNFKVKKKKKNDKGKSYGRQRKERVLDPEVAQLLSQANEAFVRNDLQVAERLFNEVI 155
Query: 119 RLEEELPNSYHILGLVHDALGNTAKAMGCYWLAACYKQKDSSLWKLIFPWLIEQGDTTWA 178
+ + +Y LG ++ G ++LAA D WK++ + A
Sbjct: 156 KKDARNFAAYETLGDIYQLQGRLNDCCNSWFLAAHLNASDWEFWKIVAILSADLDHVRQA 215
Query: 179 MSCLSEAVKADPNDFKLKFHLASLYVELGNFQRAADVYRQMVQLCPENIEALKMGAKLYQ 238
+ C S + +P +++ + + LY + G RA D ++++ P + L+ A LY
Sbjct: 216 IYCFSRVISLNPMEWESIYRRSMLYKKTGQLARALDGFQRLYMYNPYDANILRELAILYV 275
Query: 239 KSGQIESSVDILEDYLK 255
+IE S+++ Y+K
Sbjct: 276 DYDRIEDSIEL---YMK 289
Score = 144 (55.7 bits), Expect = 3.2e-19, Sum P(4) = 3.2e-19
Identities = 33/97 (34%), Positives = 57/97 (58%)
Query: 622 AAREYLEAYKL-LPENPLINLCVGTALINLALGVRLQNKHQCVAQGLAFLYNNLRLAEN- 679
+A +YL + +P++P++NL +G + I+ A+ +H + GL +LY ++ ++
Sbjct: 893 SALQYLTRLEEDIPDDPMVNLLMGLSHIHRAMQRLTAQRHFQIFHGLRYLYRYHKIRKSL 952
Query: 680 -----SQEALYNIARAYHHVGLVSLAASYYEKVLAMY 711
QEA YN+ RA+H +GLVS+A YY +VL Y
Sbjct: 953 YTDLEKQEADYNLGRAFHLIGLVSIAIEYYNRVLENY 989
Score = 85 (35.0 bits), Expect = 6.6e-12, Sum P(4) = 6.6e-12
Identities = 28/114 (24%), Positives = 59/114 (51%)
Query: 185 AVKADPNDFKLKFHLASLYVELGNFQRAADVYRQMVQLCPENIEALKMGAKLYQKSGQIE 244
A + +D++ +A L +L + ++A + +++ L P E++ + LY+K+GQ+
Sbjct: 188 AAHLNASDWEFWKIVAILSADLDHVRQAIYCFSRVISLNPMEWESIYRRSMLYKKTGQLA 247
Query: 245 SSVDILEDYLKGHPTEADFGVIDLLASMLVQMNAYDRVLKHIELVDLVYYSGKE 298
++D + +P +A+ ++ LA + V YDR+ IEL V+ + E
Sbjct: 248 RALDGFQRLYMYNPYDAN--ILRELAILYVD---YDRIEDSIELYMKVFNANVE 296
Score = 68 (29.0 bits), Expect = 3.2e-19, Sum P(4) = 3.2e-19
Identities = 23/114 (20%), Positives = 51/114 (44%)
Query: 303 LKIKAGICHIQLGNTDKAEILLTAIHWENVSDHAESINEIADLFKNRELYSTALKYYH-M 361
++++ G+ + N +A ++ E SD A+ E A E Y A+ ++ +
Sbjct: 434 IRVRLGLLRLNTDNLVEALNHFQCLYDETFSDVADLYFEAATALTRAEKYKEAIDFFTPL 493
Query: 362 LEANAGVHNDGCLHLKIAECSLALKEREKSIIYFYKALQILEDNIDARLTLASL 415
L D + +A C ++ E + ++ A++ D++D R++LA +
Sbjct: 494 LSLEEWRTTD--VFKPLARCYKEIESYETAKEFYELAIKSEPDDLDIRVSLAEV 545
Score = 52 (23.4 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 18/71 (25%), Positives = 34/71 (47%)
Query: 185 AVKADPNDFKLKFHLASLYVELGNFQRAADVYRQMVQLCPENI-EALKM--GAKLYQKSG 241
A+K++P+D ++ LA +Y L + + + +V++ + E L K +
Sbjct: 528 AIKSEPDDLDIRVSLAEVYYRLNDPETFKHMLVDVVEMRKHQVDETLHRISNEKSSNDTS 587
Query: 242 QIESSVDILED 252
I SS +LED
Sbjct: 588 DI-SSKPLLED 597
Score = 43 (20.2 bits), Expect = 3.2e-19, Sum P(4) = 3.2e-19
Identities = 12/41 (29%), Positives = 21/41 (51%)
Query: 451 NIRIKIKLCRIYKAKGMIEGFVDMLLPLVCESSHQ-EETFN 490
++ I++ L +Y E F ML+ +V HQ +ET +
Sbjct: 535 DLDIRVSLAEVYYRLNDPETFKHMLVDVVEMRKHQVDETLH 575
Score = 43 (20.2 bits), Expect = 4.0e-09, Sum P(4) = 4.0e-09
Identities = 14/37 (37%), Positives = 23/37 (62%)
Query: 731 HSDL-RREAAYNL----HLIYKKSGAVDLARQVLRDH 762
++DL ++EA YNL HLI S A++ +VL ++
Sbjct: 953 YTDLEKQEADYNLGRAFHLIGLVSIAIEYYNRVLENY 989
Score = 42 (19.8 bits), Expect = 5.0e-09, Sum P(4) = 5.0e-09
Identities = 17/50 (34%), Positives = 22/50 (44%)
Query: 667 LAFLYNNLRLAEN------SQEALYNIARAYHHVGLVSLAASYYEKVLAM 710
+A Y N R+ EN + A YN Y G V LA EK L++
Sbjct: 977 IAIEYYN-RVLENYDDGKLKKHAAYNSIIIYQQSGNVELADHLMEKYLSI 1025
Score = 40 (19.1 bits), Expect = 3.5e-06, Sum P(3) = 3.5e-06
Identities = 19/92 (20%), Positives = 35/92 (38%)
Query: 338 SINEIADLFKNRELYSTALKYYHMLEANAGVHNDGCLHLKIAECSLALKEREKSIIYFYK 397
S+N ++ + + + LK + N V+ + K E K+ + Y Y
Sbjct: 826 SLNILSSTIQQK-FFLRQLKAFDSCRYNTEVNGQASITNK--EVYNPNKKSSPYLYYIYA 882
Query: 398 ALQILEDNIDARLTLASLLLEDAKDEEAISLL 429
L + L + L ED D+ ++LL
Sbjct: 883 VLLYSSRGFLSALQYLTRLEEDIPDDPMVNLL 914
>WB|WBGene00014114 [details] [associations]
symbol:tftc-3 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0040027 "negative regulation of vulval development"
evidence=IMP] InterPro:IPR001440 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF00515 PROSITE:PS50005
PROSITE:PS50293 SMART:SM00028 GO:GO:0006898 GO:GO:0040010
Gene3D:1.25.40.10 InterPro:IPR013105 Pfam:PF07719 GO:GO:0040027
EMBL:Z70783 eggNOG:NOG275814 KO:K15201 GeneTree:ENSGT00390000016929
RefSeq:NP_505626.1 ProteinModelPortal:Q95PV7 SMR:Q95PV7
STRING:Q95PV7 PaxDb:Q95PV7 EnsemblMetazoa:ZK856.13 GeneID:179419
KEGG:cel:CELE_ZK856.13 UCSC:ZK856.13 CTD:179419 WormBase:ZK856.13
HOGENOM:HOG000018900 InParanoid:Q95PV7 OMA:MRNEYDY NextBio:905306
Uniprot:Q95PV7
Length = 1037
Score = 189 (71.6 bits), Expect = 4.5e-18, Sum P(3) = 4.5e-18
Identities = 50/154 (32%), Positives = 80/154 (51%)
Query: 608 ISGHQFTMISHHQDAAREYLEAYKLLPENPLINLCVGTALINLALGVRLQNKHQCVAQGL 667
ISG+ + ++ A EYL + NPLI + + +++ L ++H +G+
Sbjct: 880 ISGNNSLITGTYRHAMGEYLRVWVANKRNPLICMLLALTFTHMSCKKDLSSRHLIGIRGI 939
Query: 668 AFL--YNNLRLAENSQEALYNIARAYHHVGLVSLAASYYEKVLAMYQKDCIIPGFPDHME 725
AF+ Y+ R + QE YNIAR +H + ++ LA +Y+KVL + C+ D E
Sbjct: 940 AFMKKYSKARACQ--QEVFYNIARMFHQMSILPLAKHFYDKVLEV-DPPCVFDFDEDGNE 996
Query: 726 DWKPGHS-DLRREAAYNLHLIYKKSGAVDLARQV 758
P DLR+ AA+NL LIY+ SG AR++
Sbjct: 997 VIIPAMKYDLRKMAAHNLALIYRTSGNNFAARKI 1030
Score = 90 (36.7 bits), Expect = 4.5e-18, Sum P(3) = 4.5e-18
Identities = 32/137 (23%), Positives = 58/137 (42%)
Query: 9 YEALAERKRKAALQNHNDCTEGXXXXXXXXXXSQDNDDERRRFEAIIFGFGSRKRSREAS 68
Y+AL E R Q + EG + + E R + +++ S
Sbjct: 174 YDALPEEARYIMTQMMSGKDEGQVNHSDEMEVEYEVETEEREPPPLKQVKIEGQKADSTS 233
Query: 69 KKYPSLKKRGRPEGSKKKVCPEIRRMLGDASLHYALGRYEEAISVLHEVIRLEEELPNSY 128
+ P+ R G K+ + MLG A++ A G +A+ +L EVI+ + + +Y
Sbjct: 234 TETPATNAEPRDRGKLKR----LDAMLGQANVLAARGNITDAMEILREVIKQDHKHAIAY 289
Query: 129 HILGLVHDALGNTAKAM 145
+ V++ LG+ KA+
Sbjct: 290 QQIATVYEQLGDHQKAL 306
Score = 77 (32.2 bits), Expect = 4.5e-18, Sum P(3) = 4.5e-18
Identities = 32/133 (24%), Positives = 58/133 (43%)
Query: 309 ICHIQLGNTDKAEILLTAIHWEN--VSDHAESINEIADLFKNRELYSTALKYYHMLEANA 366
IC L +++ +L + N V + I ++ L+KNR A+ + L N
Sbjct: 518 ICLFSLDEVEQSSVLEHKLLKRNFNVEEDEGFILDVPRLYKNRGHPKLAMNFLDQLTKNP 577
Query: 367 GVHNDGCLHLKIAECSLALKEREKSIIY--FYKALQILEDNIDARLTLASLLLEDAKDEE 424
+N+ + SL + ++ + F K L + D+ID R+ L++L + E+
Sbjct: 578 CYNNEASGAYWYLKGSLEMMQKHDDLAMEAFNKVLILQPDHIDNRIHLSTLQQKSGFFEK 637
Query: 425 AISLLTPPMSLEN 437
A+ L LEN
Sbjct: 638 ALETLEN-YDLEN 649
Score = 61 (26.5 bits), Expect = 4.1e-15, Sum P(3) = 4.1e-15
Identities = 15/44 (34%), Positives = 24/44 (54%)
Query: 169 LIEQGDTTWAMSCLSEAVKADPNDFKLKFHLASLYVELGNFQRA 212
L +G+ T AM L E +K D +A++Y +LG+ Q+A
Sbjct: 262 LAARGNITDAMEILREVIKQDHKHAIAYQQIATVYEQLGDHQKA 305
Score = 58 (25.5 bits), Expect = 3.9e-16, Sum P(3) = 3.9e-16
Identities = 39/190 (20%), Positives = 82/190 (43%)
Query: 212 AADVYRQMVQLCPENIEALKMGAKLYQKSGQIESSVDILEDY-LKGHPTEADFGVIDLLA 270
A + + +++ L P++I+ + L QKSG E +++ LE+Y L+ + D ++ A
Sbjct: 604 AMEAFNKVLILQPDHIDNRIHLSTLQQKSGFFEKALETLENYDLENCSSMPDERLLARRA 663
Query: 271 SMLVQMNAYDRVLK--HIELVDLVY--YSGKELLLALKIKAGICHIQ-LGNTDKAEILLT 325
+L + ++ ++ + L Y Y ++L ++ G L NT K
Sbjct: 664 DVLFEAGDSEQFVRITRMMLAPHFYKVYISPDILKKRRVTKGKTTTPALSNTLKTCAFGV 723
Query: 326 AIH--WENVSDHAESINEIADLFKNRELYSTALKYYHMLEANAGVHNDGCLHLKIAECSL 383
H WE + + + + + T+L + +H D CL K+ EC
Sbjct: 724 VKHTNWERL------VKRLGATVEANGTFQTSL-------SGTDIH-DYCL--KLIECLN 767
Query: 384 ALKEREKSII 393
+++ + ++I
Sbjct: 768 KMEKHQDALI 777
Score = 56 (24.8 bits), Expect = 6.3e-16, Sum P(3) = 6.3e-16
Identities = 25/110 (22%), Positives = 45/110 (40%)
Query: 153 CYKQKDS-SLWKLIFPWLIEQGDTTWAMSCLSEAVKADPNDFKLKFHLASLYVELGNFQR 211
CY + S + W L + Q AM ++ + P+ + HL++L + G F++
Sbjct: 578 CYNNEASGAYWYLKGSLEMMQKHDDLAMEAFNKVLILQPDHIDNRIHLSTLQQKSGFFEK 637
Query: 212 AADVYRQM-VQLC---PENIEALKMGAKLYQKSGQIESSVDILEDYLKGH 257
A + ++ C P+ L A + ++G E V I L H
Sbjct: 638 ALETLENYDLENCSSMPDE-RLLARRADVLFEAGDSEQFVRITRMMLAPH 686
Score = 56 (24.8 bits), Expect = 1.3e-14, Sum P(3) = 1.3e-14
Identities = 38/173 (21%), Positives = 74/173 (42%)
Query: 172 QGDTTWAMSCLSEAVKADPNDF-KLK-----FHLASLYVELGNFQRAADVYRQMVQLCPE 225
+G + S + A A+P D KLK A++ GN A ++ R++++ +
Sbjct: 225 EGQKADSTSTETPATNAEPRDRGKLKRLDAMLGQANVLAARGNITDAMEILREVIKQDHK 284
Query: 226 NIEALKMGAKLYQKSGQIESSVD--ILEDYL--KGHPTE-ADFGVIDLLASMLVQMNA-Y 279
+ A + A +Y++ G + ++ +L +L K P + +G M+ + Y
Sbjct: 285 HAIAYQQIATVYEQLGDHQKALQFGLLASHLDPKTPPDDWVHWGDEAEKFGMIEEAAVCY 344
Query: 280 DRVLKHIELVDLVYYSGK-ELLLALKIK--AGICHIQLGNTDKAEILLTAIHW 329
DR + H+ + +Y + E+L L ++ A +Q EIL W
Sbjct: 345 DRAI-HLNNENWKFYEKRIEMLDRLNLRPLAMRTRLQAAQLINNEILQVDFEW 396
>UNIPROTKB|Q233J3 [details] [associations]
symbol:TTHERM_00391570 "DNA polymerase" species:312017
"Tetrahymena thermophila SB210" [GO:0003887 "DNA-directed DNA
polymerase activity" evidence=IBA] [GO:0005634 "nucleus"
evidence=IBA] [GO:0005694 "chromosome" evidence=IBA] [GO:0016035
"zeta DNA polymerase complex" evidence=IBA] [GO:0019985
"translesion synthesis" evidence=IBA] [GO:0006297
"nucleotide-excision repair, DNA gap filling" evidence=IBA]
[GO:0008408 "3'-5' exonuclease activity" evidence=IBA]
InterPro:IPR001440 InterPro:IPR006133 InterPro:IPR006134
InterPro:IPR006172 InterPro:IPR011990 InterPro:IPR012337
InterPro:IPR013026 InterPro:IPR017964 InterPro:IPR019734
Pfam:PF00136 Pfam:PF00515 Pfam:PF03104 PRINTS:PR00106
PROSITE:PS00116 PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028
SMART:SM00486 GO:GO:0005634 GO:GO:0005694 GO:GO:0000166
GO:GO:0003677 GO:GO:0006260 Gene3D:1.25.40.10 InterPro:IPR006597
SMART:SM00671 SUPFAM:SSF53098 InterPro:IPR013105 Pfam:PF07719
GO:GO:0003887 GO:GO:0019985 Gene3D:3.90.1600.10 InterPro:IPR023211
InterPro:IPR025687 Pfam:PF14260 KO:K02350 GO:GO:0016035
EMBL:GG662770 RefSeq:XP_001011832.1 ProteinModelPortal:Q233J3
EnsemblProtists:EAR91587 GeneID:7847176 KEGG:tet:TTHERM_00391570
ProtClustDB:CLSZ2498360 Uniprot:Q233J3
Length = 2315
Score = 179 (68.1 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 78/386 (20%), Positives = 169/386 (43%)
Query: 89 PEIRRMLGDASL-HYALGRYEEAISVLHEVIRLEEELPNSYHILGL---VHDALGNTAKA 144
P ++L A+L +Y+ +++EAI + + ++ P Y I G V+ +GN KA
Sbjct: 1924 PNSLQVLKRAALFYYSNNQFQEAIQNYEKALSID---PQDYEIFGCLAQVYHQIGNIQKA 1980
Query: 145 MGCYWLAACYKQKDSSLWKLIFPWLIEQGDTTWAMSCLSEAVKADPNDFKLKFHLASLYV 204
+ A ++ + + E G A+ C A++ +P ++ +L Y+
Sbjct: 1981 IKILEKAIKQNPRNHQFHYDLGNYSSEVGLKNEAIQCYLNALEINPEFYQALNNLGGEYI 2040
Query: 205 ELGNFQRAADVYRQMVQLCPENIEALKMGAKLYQKSGQIESSVDILEDYLKGHPTEADFG 264
+ + A + ++++ P++ AL L + G IE + D L+ L + D+
Sbjct: 2041 FMERLEEAQSCFLKILETYPQDFNALIQLVVLCIERGMIEEAKDYLQKCLLNN--NLDYD 2098
Query: 265 VIDLLASMLVQMNAYDRVLKHIELVDLVYYSGKELLLALKIKAGICHIQLGNTDKAEILL 324
+ +A + + + E + + ++L + + H GNT++++I
Sbjct: 2099 ACNGIAQCYEALGMIEEAIFWCEKALKINPNSVDVLSNI----ALLHFMNGNTEESKICF 2154
Query: 325 TAIHWENVSDHAESINEIADLFKNRELYSTALKYYHM-LEANAGVHNDGCLHLKIAECSL 383
+ DH+ ++ + ++ + YS A+ +Y +E + +H+ G +L +
Sbjct: 2155 EKT-LKIKPDHSYALTNLGFIYYLQGDYSKAISFYQQSIEIDPSMHH-GFNNLGLIYQHQ 2212
Query: 384 ALKEREKSIIYFYKALQILEDNIDARLTLASLLLEDAKDEEAISLLTPPMSLENKYVNSD 443
L E+ K + KALQIL + A L S+ ++ K E+AI ++ +++
Sbjct: 2213 GLAEQAKQ--QYEKALQILPNFAQALNNLGSIYYKNGKIEDAIEYYKKAQQVDPQFLEPY 2270
Query: 444 KTHAWWLNIRIKIKLCRIYKAKGMIE 469
K+ + I K+ + +AK M++
Sbjct: 2271 KSLGY-----IYQKIGMVVEAKNMLD 2291
Score = 167 (63.8 bits), Expect = 3.8e-09, Sum P(2) = 3.8e-09
Identities = 71/329 (21%), Positives = 141/329 (42%)
Query: 102 YALGRYEEAISVLHEVIRLEEELPNSYHILGLVHDALGNTAKAMGCYWLAA----CYKQK 157
Y G++++A+ +E +++ + Y+ +G ++D +A+ Y A Y
Sbjct: 1835 YQQGKFQDALQKFNESLQINPLQVDIYNTIGSIYDQQNMKDQAIKQYQKALEIQPSYYTA 1894
Query: 158 DSSLWKLIFPWLIEQGDTTWAMSCLSEAVKADPNDFKLKFHLASLYVELGNFQRAADVYR 217
+L L F W ++ A C +A+ +PN ++ A Y FQ A Y
Sbjct: 1895 LLNLGNLYF-W--DKNMVKEANECFQKALDINPNSLQVLKRAALFYYSNNQFQEAIQNYE 1951
Query: 218 QMVQLCPENIEALKMGAKLYQKSGQIESSVDILEDYLKGHPTEADFGVIDLLASMLVQMN 277
+ + + P++ E A++Y + G I+ ++ ILE +K +P F DL + ++
Sbjct: 1952 KALSIDPQDYEIFGCLAQVYHQIGNIQKAIKILEKAIKQNPRNHQFHY-DL-GNYSSEVG 2009
Query: 278 AYDRVLK-HIELVDLVYYSGKELLLALKIKAGICHIQLGNTDKAEILLTAIHWENVSDHA 336
+ ++ ++ +++ E AL G +I + ++A+ I E
Sbjct: 2010 LKNEAIQCYLNALEI----NPEFYQALNNLGGE-YIFMERLEEAQSCFLKI-LETYPQDF 2063
Query: 337 ESINEIADLFKNRELYSTALKYYHMLEANAGVHNDGCLHLKIAECSLALKEREKSIIYFY 396
++ ++ L R + A Y N + D C IA+C AL E++I +
Sbjct: 2064 NALIQLVVLCIERGMIEEAKDYLQKCLLNNNLDYDACNG--IAQCYEALGMIEEAIFWCE 2121
Query: 397 KALQILEDNIDARLTLASLLLEDAKDEEA 425
KAL+I +++D +A L + EE+
Sbjct: 2122 KALKINPNSVDVLSNIALLHFMNGNTEES 2150
Score = 128 (50.1 bits), Expect = 0.00075, P = 0.00075
Identities = 84/402 (20%), Positives = 174/402 (43%)
Query: 125 PNSYHIL---GLVHDALGNTAKAMGCYWLAACYKQKDSSLWKLIFPWLIEQGDTTWAMSC 181
PNS +L L + + +A+ Y A +D ++ + + G+ A+
Sbjct: 1924 PNSLQVLKRAALFYYSNNQFQEAIQNYEKALSIDPQDYEIFGCLAQVYHQIGNIQKAIKI 1983
Query: 182 LSEAVKADPNDFKLKFHLASLYVELGNFQRAADVYRQMVQLCPENIEALK-MGAK--LYQ 238
L +A+K +P + + + L + E+G A Y +++ PE +AL +G + +
Sbjct: 1984 LEKAIKQNPRNHQFHYDLGNYSSEVGLKNEAIQCYLNALEINPEFYQALNNLGGEYIFME 2043
Query: 239 KSGQIESS-VDILEDYLKGHPTEADF-------GVI----DLLASMLVQMNA-YDR---V 282
+ + +S + ILE Y + G+I D L L+ N YD +
Sbjct: 2044 RLEEAQSCFLKILETYPQDFNALIQLVVLCIERGMIEEAKDYLQKCLLNNNLDYDACNGI 2103
Query: 283 LKHIELVDLV----YYSGKELLL---ALKIKAGIC--HIQLGNTDKAEILLTAIHWENVS 333
+ E + ++ ++ K L + ++ + + I H GNT++++I +
Sbjct: 2104 AQCYEALGMIEEAIFWCEKALKINPNSVDVLSNIALLHFMNGNTEESKICFEKT-LKIKP 2162
Query: 334 DHAESINEIADLFKNRELYSTALKYYHM-LEANAGVHNDGCLHLKIAECSLALKEREKSI 392
DH+ ++ + ++ + YS A+ +Y +E + +H+ G +L + L E+ K
Sbjct: 2163 DHSYALTNLGFIYYLQGDYSKAISFYQQSIEIDPSMHH-GFNNLGLIYQHQGLAEQAKQ- 2220
Query: 393 IYFYKALQILEDNIDARLTLASLLLEDAKDEEAISLLTPPMSLENKYVNSDKTHAWWLNI 452
+ KALQIL + A L S+ ++ K E+AI ++ +++ K+ +
Sbjct: 2221 -QYEKALQILPNFAQALNNLGSIYYKNGKIEDAIEYYKKAQQVDPQFLEPYKSLGY---- 2275
Query: 453 RIKIKLCRIYKAKGMIEGFVDMLLPLVCESSHQEETFNHEEH 494
I K+ + +AK M+ D L L +Q++ F+ + +
Sbjct: 2276 -IYQKIGMVVEAKNML----DQLTQL---KQNQQKIFDFKNY 2309
Score = 65 (27.9 bits), Expect = 3.8e-09, Sum P(2) = 3.8e-09
Identities = 17/63 (26%), Positives = 27/63 (42%)
Query: 646 ALINLALGVRLQNKHQCVAQGLAFLYNNLRLAENSQEALYNIARAYHHVGLVSLAASYYE 705
AL NL LQ + ++ ++F ++ + + N+ Y H GL A YE
Sbjct: 2167 ALTNLGFIYYLQGDY---SKAISFYQQSIEIDPSMHHGFNNLGLIYQHQGLAEQAKQQYE 2223
Query: 706 KVL 708
K L
Sbjct: 2224 KAL 2226
Score = 60 (26.2 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 15/49 (30%), Positives = 25/49 (51%)
Query: 659 KHQCVAQGLAFLYNN-LRLAENSQEALYNIARAYHHVGLVSLAASYYEK 706
+HQ +A+ Y L++ N +AL N+ Y+ G + A YY+K
Sbjct: 2210 QHQGLAEQAKQQYEKALQILPNFAQALNNLGSIYYKNGKIEDAIEYYKK 2258
>MGI|MGI:2143311 [details] [associations]
symbol:Bbs4 "Bardet-Biedl syndrome 4 (human)" species:10090
"Mus musculus" [GO:0000226 "microtubule cytoskeleton organization"
evidence=IMP] [GO:0000242 "pericentriolar material" evidence=ISO]
[GO:0001843 "neural tube closure" evidence=IMP] [GO:0001895 "retina
homeostasis" evidence=IMP] [GO:0003085 "negative regulation of
systemic arterial blood pressure" evidence=IMP] [GO:0003777
"microtubule motor activity" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO;IDA]
[GO:0005814 "centriole" evidence=ISO] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005929 "cilium" evidence=IEA] [GO:0005932 "microtubule basal
body" evidence=ISO] [GO:0007286 "spermatid development"
evidence=IMP] [GO:0007608 "sensory perception of smell"
evidence=IMP] [GO:0008104 "protein localization" evidence=IMP]
[GO:0010629 "negative regulation of gene expression" evidence=IMP]
[GO:0016020 "membrane" evidence=IEA] [GO:0016358 "dendrite
development" evidence=IMP] [GO:0019216 "regulation of lipid
metabolic process" evidence=IMP] [GO:0021756 "striatum development"
evidence=IMP] [GO:0021766 "hippocampus development" evidence=IMP]
[GO:0021987 "cerebral cortex development" evidence=IMP] [GO:0030534
"adult behavior" evidence=IMP] [GO:0031513 "nonmotile primary
cilium" evidence=ISO] [GO:0031514 "motile cilium" evidence=ISO;IMP]
[GO:0032465 "regulation of cytokinesis" evidence=ISO] [GO:0033205
"cell cycle cytokinesis" evidence=ISO] [GO:0033210 "leptin-mediated
signaling pathway" evidence=IMP] [GO:0033365 "protein localization
to organelle" evidence=IDA] [GO:0034451 "centriolar satellite"
evidence=ISO] [GO:0034452 "dynactin binding" evidence=ISO]
[GO:0034454 "microtubule anchoring at centrosome" evidence=ISO]
[GO:0034464 "BBSome" evidence=ISO;IDA] [GO:0035058 "nonmotile
primary cilium assembly" evidence=IMP] [GO:0038108 "negative
regulation of appetite by leptin-mediated signaling pathway"
evidence=IMP] [GO:0040018 "positive regulation of multicellular
organism growth" evidence=IMP] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0042995 "cell projection" evidence=IEA]
[GO:0043014 "alpha-tubulin binding" evidence=ISO] [GO:0044321
"response to leptin stimulus" evidence=IMP] [GO:0045494
"photoreceptor cell maintenance" evidence=IMP] [GO:0045724
"positive regulation of cilium assembly" evidence=IMP] [GO:0046548
"retinal rod cell development" evidence=IMP] [GO:0048487
"beta-tubulin binding" evidence=ISO] [GO:0048854 "brain
morphogenesis" evidence=IMP] [GO:0051297 "centrosome organization"
evidence=ISO] [GO:0051457 "maintenance of protein location in
nucleus" evidence=ISO] [GO:0060170 "cilium membrane" evidence=ISO]
[GO:0060271 "cilium morphogenesis" evidence=IMP] [GO:0060296
"regulation of cilium beat frequency involved in ciliary motility"
evidence=IMP] InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028
MGI:MGI:2143311 GO:GO:0005634 GO:GO:0021987 GO:GO:0021766
GO:GO:0005814 GO:GO:0051297 GO:GO:0007286 GO:GO:0016358
GO:GO:0040018 GO:GO:0019216 GO:GO:0045494 eggNOG:COG0457
Gene3D:1.25.40.10 GO:GO:0007608 GO:GO:0030534 GO:GO:0001843
GO:GO:0010629 GO:GO:0033365 GO:GO:0005932 InterPro:IPR013105
Pfam:PF07719 GO:GO:0001895 GO:GO:0031514 GO:GO:0000242
GO:GO:0045444 GO:GO:0034451 GO:GO:0033205 GO:GO:0046548
GO:GO:0003777 GO:GO:0051457 GO:GO:0060170 GO:GO:0034464
GO:GO:0035058 GO:GO:0048854 GO:GO:0038108 GO:GO:0060296
GO:GO:0021756 CTD:585 GeneTree:ENSGT00530000063455
HOGENOM:HOG000261391 HOVERGEN:HBG024456 KO:K16531 OMA:YNQGEKR
OrthoDB:EOG4GF3DX GO:GO:0031513 GO:GO:0034454 GO:GO:0003085
GO:GO:0045724 GO:GO:0032465 EMBL:AK039560 EMBL:AK089970
EMBL:AK134734 EMBL:BC055797 EMBL:BC089507 EMBL:BC092531
IPI:IPI00224571 RefSeq:NP_780534.1 UniGene:Mm.200714
ProteinModelPortal:Q8C1Z7 SMR:Q8C1Z7 IntAct:Q8C1Z7 STRING:Q8C1Z7
PhosphoSite:Q8C1Z7 PRIDE:Q8C1Z7 Ensembl:ENSMUST00000026265
GeneID:102774 KEGG:mmu:102774 InParanoid:Q8C1Z7 NextBio:355647
Bgee:Q8C1Z7 CleanEx:MM_BBS4 Genevestigator:Q8C1Z7
GermOnline:ENSMUSG00000025235 Uniprot:Q8C1Z7
Length = 520
Score = 131 (51.2 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 41/216 (18%), Positives = 93/216 (43%)
Query: 72 PSLKKRGRPEGSKKKVCPEIRRMLGDASLHYALGRYEEAISVLHEVIRLEEELPN-SYHI 130
P+ + +P K P + + LHY YE +V+ E ++ + L + ++
Sbjct: 13 PASVESQKPRSKKAPDFPIVEKQNWLIHLHYIRKDYEACKAVIKEQLQETQGLCEYAIYV 72
Query: 131 LGLVHDALGNTAKAMGCYWLAACYKQKDSSLWKLIFPWLIEQGDTTWAMSCLSEAVKADP 190
L+ GN +++ + A + + K + L G A +EA K +
Sbjct: 73 QALIFRLEGNIQESLELFQTCAVLSPQCADNLKQVARSLFLLGKHKAATEVYNEAAKLNQ 132
Query: 191 NDFKLKFHLASLYVELGNFQRAADVYRQMVQLCPENIEALKMGAKLYQKSGQIESSVDIL 250
D+++ +L Y L F +A D +QL ++ + +G K++ G ++ +++I
Sbjct: 133 KDWEICHNLGVCYTYLKQFNKAQDQLHSALQLNKHDLTYIMLG-KIHLLQGDLDKAIEIY 191
Query: 251 EDYLKGHPTEADFGVIDLLASMLVQMNAYDRVLKHI 286
+ ++ P + ++ L + +Q+ Y + +H+
Sbjct: 192 KKAVEFSPENTE--LLTTLGLLYLQLGVYQKAFEHL 225
Score = 105 (42.0 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 36/143 (25%), Positives = 64/143 (44%)
Query: 102 YALGRYEEAISVLHEVIRLEEELPNSYHILGLVHDALGNTAKAMGCYWLAACYKQKDSSL 161
+ LG+++ A V +E +L ++ H LG+ + L KA A + D +
Sbjct: 112 FLLGKHKAATEVYNEAAKLNQKDWEICHNLGVCYTYLKQFNKAQDQLHSALQLNKHDLTY 171
Query: 162 WKLIFPWLIEQGDTTWAMSCLSEAVKADPNDFKLKFHLASLYVELGNFQRAADVYRQMVQ 221
L L+ QGD A+ +AV+ P + +L L LY++LG +Q+A + +
Sbjct: 172 IMLGKIHLL-QGDLDKAIEIYKKAVEFSPENTELLTTLGLLYLQLGVYQKAFEHLGNALT 230
Query: 222 LCPENIEALKMGAKLYQKSGQIE 244
P N +A+ + Q G +
Sbjct: 231 YDPANYKAILAAGSMMQTHGDFD 253
Score = 63 (27.2 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 20/68 (29%), Positives = 34/68 (50%)
Query: 614 TMISHHQDAAREYLEAYKLLPENPLINLCVGTALINLALGVRLQNKHQCVAQGLAFLYNN 673
T + ++A R Y+EA +L NPL+NL L N ++Q + + + FL +N
Sbjct: 349 TNLEDIENARRAYVEAVRLDKCNPLVNLNYAVLLYNQGEKKSALAQYQEMEKKVNFLKDN 408
Query: 674 LRLAENSQ 681
L +S+
Sbjct: 409 SPLEFDSE 416
>UNIPROTKB|Q74D87 [details] [associations]
symbol:GSU1432 "TPR domain protein" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001440 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF00515 PROSITE:PS50005 PROSITE:PS50293
SMART:SM00028 EMBL:AE017180 GenomeReviews:AE017180_GR
Gene3D:1.25.40.10 RefSeq:NP_952483.1 ProteinModelPortal:Q74D87
GeneID:2687801 KEGG:gsu:GSU1432 PATRIC:22025707
HOGENOM:HOG000134346 OMA:NGAIEAD ProtClustDB:CLSK924505
BioCyc:GSUL243231:GH27-1411-MONOMER Uniprot:Q74D87
Length = 573
Score = 147 (56.8 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 81/380 (21%), Positives = 158/380 (41%)
Query: 60 SRKRSREASKKYPSLKKRGRPEGSKKKVCPEIRRMLGDASLHYALGRYEEAISVLHEVIR 119
S KR R+A P L+K + S+++ + A + L YE+A++ L +++
Sbjct: 126 SLKRDRDA---VPHLEKAIELDPSREEAYIHL------AVSYLKLFEYEKAVNTLKSLVK 176
Query: 120 LEEELPNSYHILGLVHDALGNTAKAMGCYWLAACYKQKDSSLWKLIFPWLIEQGDTTW-- 177
++ E Y+ LG +D + K Y+ A + D +I ++++G
Sbjct: 177 VKPESSLGYYYLGKAYDQM-KLQKEAANYYKKAIELKPDFEQ-AIIELGIVQEGMGLHDE 234
Query: 178 AMSCLSEAVKADPNDFKLKFHLASLYVELGNFQRAADVYRQMVQLCPENIEALKMGAKLY 237
A++ + +P + + HL +Y++ + A + + + + +E + +Y
Sbjct: 235 AVATYKSLLDINPYNLNVLQHLVQIYLQQQEYDEALPLLKGLKEKGIGGLETSRKIGLIY 294
Query: 238 QKSGQIESSVDILEDYLKGHPTEADFGVIDLLASMLVQMNAYDRVLKHIELVDLVYYSGK 297
+S + + ++ D L+ P V LA+ + YDR L+ + ++
Sbjct: 295 MESERYDEAIAEFRDILEREPNALQ--VRFYLATAFEEKEEYDRALEEFGRIPPGSFNYF 352
Query: 298 ELLLALKIKAGICHIQLGNTDKA-EILLTAIHWENVSDHAESINEIADLFKNRELYSTAL 356
E A+ A I H +GN +K +L AI H E +A L+++ + Y+ L
Sbjct: 353 E---AVGHMAFI-HKDMGNPEKGIAVLKDAI--AAYPSHLELHLYLAGLYESLDHYTEGL 406
Query: 357 KYYHMLEANAGVHNDGCLHLKIAECSLALKEREKSIIYFYKALQILEDNIDARLTLASLL 416
+E + G D LH ++ + +++SI K L I D+ A L
Sbjct: 407 AVLKAVEGDFG--GDPRLHFRMGTLYDKMGNKDESIARMKKVLTIAPDDAQALNYLGYTY 464
Query: 417 LE-DAKDEEAISLLTPPMSL 435
E K +EA+ L + L
Sbjct: 465 AELGIKLDEALQYLRKAVEL 484
>TIGR_CMR|GSU_1432 [details] [associations]
symbol:GSU_1432 "TPR domain protein" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001440 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF00515 PROSITE:PS50005 PROSITE:PS50293
SMART:SM00028 EMBL:AE017180 GenomeReviews:AE017180_GR
Gene3D:1.25.40.10 RefSeq:NP_952483.1 ProteinModelPortal:Q74D87
GeneID:2687801 KEGG:gsu:GSU1432 PATRIC:22025707
HOGENOM:HOG000134346 OMA:NGAIEAD ProtClustDB:CLSK924505
BioCyc:GSUL243231:GH27-1411-MONOMER Uniprot:Q74D87
Length = 573
Score = 147 (56.8 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 81/380 (21%), Positives = 158/380 (41%)
Query: 60 SRKRSREASKKYPSLKKRGRPEGSKKKVCPEIRRMLGDASLHYALGRYEEAISVLHEVIR 119
S KR R+A P L+K + S+++ + A + L YE+A++ L +++
Sbjct: 126 SLKRDRDA---VPHLEKAIELDPSREEAYIHL------AVSYLKLFEYEKAVNTLKSLVK 176
Query: 120 LEEELPNSYHILGLVHDALGNTAKAMGCYWLAACYKQKDSSLWKLIFPWLIEQGDTTW-- 177
++ E Y+ LG +D + K Y+ A + D +I ++++G
Sbjct: 177 VKPESSLGYYYLGKAYDQM-KLQKEAANYYKKAIELKPDFEQ-AIIELGIVQEGMGLHDE 234
Query: 178 AMSCLSEAVKADPNDFKLKFHLASLYVELGNFQRAADVYRQMVQLCPENIEALKMGAKLY 237
A++ + +P + + HL +Y++ + A + + + + +E + +Y
Sbjct: 235 AVATYKSLLDINPYNLNVLQHLVQIYLQQQEYDEALPLLKGLKEKGIGGLETSRKIGLIY 294
Query: 238 QKSGQIESSVDILEDYLKGHPTEADFGVIDLLASMLVQMNAYDRVLKHIELVDLVYYSGK 297
+S + + ++ D L+ P V LA+ + YDR L+ + ++
Sbjct: 295 MESERYDEAIAEFRDILEREPNALQ--VRFYLATAFEEKEEYDRALEEFGRIPPGSFNYF 352
Query: 298 ELLLALKIKAGICHIQLGNTDKA-EILLTAIHWENVSDHAESINEIADLFKNRELYSTAL 356
E A+ A I H +GN +K +L AI H E +A L+++ + Y+ L
Sbjct: 353 E---AVGHMAFI-HKDMGNPEKGIAVLKDAI--AAYPSHLELHLYLAGLYESLDHYTEGL 406
Query: 357 KYYHMLEANAGVHNDGCLHLKIAECSLALKEREKSIIYFYKALQILEDNIDARLTLASLL 416
+E + G D LH ++ + +++SI K L I D+ A L
Sbjct: 407 AVLKAVEGDFG--GDPRLHFRMGTLYDKMGNKDESIARMKKVLTIAPDDAQALNYLGYTY 464
Query: 417 LE-DAKDEEAISLLTPPMSL 435
E K +EA+ L + L
Sbjct: 465 AELGIKLDEALQYLRKAVEL 484
>UNIPROTKB|Q96RK4 [details] [associations]
symbol:BBS4 "Bardet-Biedl syndrome 4 protein" species:9606
"Homo sapiens" [GO:0003085 "negative regulation of systemic
arterial blood pressure" evidence=IEA] [GO:0010629 "negative
regulation of gene expression" evidence=IEA] [GO:0040018 "positive
regulation of multicellular organism growth" evidence=IEA]
[GO:0051297 "centrosome organization" evidence=IMP] [GO:0000242
"pericentriolar material" evidence=IDA] [GO:0003777 "microtubule
motor activity" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0034464 "BBSome" evidence=IDA] [GO:0045444 "fat
cell differentiation" evidence=ISS] [GO:0060271 "cilium
morphogenesis" evidence=ISS] [GO:0060296 "regulation of cilium beat
frequency involved in ciliary motility" evidence=ISS] [GO:0001947
"heart looping" evidence=ISS] [GO:0032402 "melanosome transport"
evidence=ISS] [GO:0000226 "microtubule cytoskeleton organization"
evidence=ISS] [GO:0001843 "neural tube closure" evidence=ISS]
[GO:0001895 "retina homeostasis" evidence=ISS] [GO:0007286
"spermatid development" evidence=ISS] [GO:0007608 "sensory
perception of smell" evidence=ISS] [GO:0016358 "dendrite
development" evidence=ISS] [GO:0019216 "regulation of lipid
metabolic process" evidence=ISS] [GO:0021756 "striatum development"
evidence=ISS] [GO:0021766 "hippocampus development" evidence=ISS]
[GO:0021987 "cerebral cortex development" evidence=ISS] [GO:0030534
"adult behavior" evidence=ISS] [GO:0035058 "nonmotile primary
cilium assembly" evidence=ISS] [GO:0045494 "photoreceptor cell
maintenance" evidence=ISS] [GO:0045724 "positive regulation of
cilium assembly" evidence=ISS] [GO:0046548 "retinal rod cell
development" evidence=ISS] [GO:0048854 "brain morphogenesis"
evidence=ISS] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0046907 "intracellular transport" evidence=ISS] [GO:0051877
"pigment granule aggregation in cell center" evidence=ISS]
[GO:0060027 "convergent extension involved in gastrulation"
evidence=ISS] [GO:0005813 "centrosome" evidence=IDA] [GO:0050893
"sensory processing" evidence=TAS] [GO:0034451 "centriolar
satellite" evidence=IDA] [GO:0034452 "dynactin binding"
evidence=IDA] [GO:0034454 "microtubule anchoring at centrosome"
evidence=IMP] [GO:0033365 "protein localization to organelle"
evidence=ISS] [GO:0005932 "microtubule basal body" evidence=IDA]
[GO:0031514 "motile cilium" evidence=IDA] [GO:0005814 "centriole"
evidence=IDA] [GO:0032465 "regulation of cytokinesis" evidence=IMP]
[GO:0033205 "cell cycle cytokinesis" evidence=IMP] [GO:0051457
"maintenance of protein location in nucleus" evidence=IGI]
[GO:0031513 "nonmotile primary cilium" evidence=IDA] [GO:0043014
"alpha-tubulin binding" evidence=IDA] [GO:0048487 "beta-tubulin
binding" evidence=IDA] [GO:0060170 "cilium membrane" evidence=IDA]
[GO:0038108 "negative regulation of appetite by leptin-mediated
signaling pathway" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF13181 PROSITE:PS50005 PROSITE:PS50293
SMART:SM00028 GO:GO:0005634 GO:GO:0021987 GO:GO:0021766
GO:GO:0005814 GO:GO:0051297 GO:GO:0007286 GO:GO:0016358
GO:GO:0040018 GO:GO:0019216 GO:GO:0045494 eggNOG:COG0457
Gene3D:1.25.40.10 GO:GO:0007608 GO:GO:0030534 GO:GO:0001843
GO:GO:0010629 GO:GO:0005932 GO:GO:0001947 GO:GO:0001895
GO:GO:0048487 GO:GO:0031514 GO:GO:0000242 GO:GO:0045444
GO:GO:0034451 GO:GO:0033205 GO:GO:0046548 GO:GO:0046907
GO:GO:0003777 GO:GO:0051457 GO:GO:0043014 GO:GO:0060170
GO:GO:0032402 MIM:209900 Orphanet:110 GO:GO:0060027 GO:GO:0034464
GO:GO:0035058 GO:GO:0051877 GO:GO:0048854 GO:GO:0038108
GO:GO:0060296 GO:GO:0021756 CTD:585 HOGENOM:HOG000261391
HOVERGEN:HBG024456 KO:K16531 OMA:YNQGEKR OrthoDB:EOG4GF3DX
GO:GO:0031513 GO:GO:0034454 GO:GO:0003085 GO:GO:0045724
GO:GO:0032465 EMBL:AF359281 EMBL:AY457143 EMBL:AK075321
EMBL:BC008923 EMBL:BC027624 IPI:IPI00290189 IPI:IPI00798373
RefSeq:NP_149017.2 UniGene:Hs.208681 ProteinModelPortal:Q96RK4
SMR:Q96RK4 IntAct:Q96RK4 STRING:Q96RK4 PhosphoSite:Q96RK4
DMDM:160359000 PRIDE:Q96RK4 DNASU:585 Ensembl:ENST00000268057
Ensembl:ENST00000395205 GeneID:585 KEGG:hsa:585 UCSC:uc002avb.3
UCSC:uc002avd.3 GeneCards:GC15P072978 H-InvDB:HIX0012411
HGNC:HGNC:969 HPA:HPA039418 MIM:600374 neXtProt:NX_Q96RK4
PharmGKB:PA25278 InParanoid:Q96RK4 PhylomeDB:Q96RK4 GenomeRNAi:585
NextBio:2391 ArrayExpress:Q96RK4 Bgee:Q96RK4 CleanEx:HS_BBS4
Genevestigator:Q96RK4 GermOnline:ENSG00000140463 GO:GO:0034452
GO:GO:0050893 Uniprot:Q96RK4
Length = 519
Score = 135 (52.6 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 41/224 (18%), Positives = 99/224 (44%)
Query: 65 REASK-KYPSLKKRGRPEGSKKKVCPEIRRMLGDASLHYALGRYEEAISVLHEVIRLEEE 123
R A++ ++P + +P K P + + LHY YE +V+ E ++ +
Sbjct: 5 RVATRTQFPVSTESQKPRQKKAPEFPILEKQNWLIHLHYIRKDYEACKAVIKEQLQETQG 64
Query: 124 LPN-SYHILGLVHDALGNTAKAMGCYWLAACYKQKDSSLWKLIFPWLIEQGDTTWAMSCL 182
L + ++ L+ GN +++ + A + + K + L G A+
Sbjct: 65 LCEYAIYVQALIFRLEGNIQESLELFQTCAVLSPQSADNLKQVARSLFLLGKHKAAIEVY 124
Query: 183 SEAVKADPNDFKLKFHLASLYVELGNFQRAADVYRQMVQLCPENIEALKMGAKLYQKSGQ 242
+EA K + D+++ +L Y+ L F +A D + L ++ + +G K++ G
Sbjct: 125 NEAAKLNQKDWEISHNLGVCYIYLKQFNKAQDQLHNALNLNRHDLTYIMLG-KIHLLEGD 183
Query: 243 IESSVDILEDYLKGHPTEADFGVIDLLASMLVQMNAYDRVLKHI 286
++ ++++ + ++ P + ++ L + +Q+ Y + +H+
Sbjct: 184 LDKAIEVYKKAVEFSPENTE--LLTTLGLLYLQLGIYQKAFEHL 225
Score = 57 (25.1 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 19/68 (27%), Positives = 32/68 (47%)
Query: 614 TMISHHQDAAREYLEAYKLLPENPLINLCVGTALINLALGVRLQNKHQCVAQGLAFLYNN 673
T + ++A R Y EA L NPL+NL L N ++Q + + ++ L +N
Sbjct: 349 TNLEDIENAKRAYAEAVHLDKCNPLVNLNYAVLLYNQGEKKNALAQYQEMEKKVSLLKDN 408
Query: 674 LRLAENSQ 681
L +S+
Sbjct: 409 SSLEFDSE 416
>UNIPROTKB|Q74DZ8 [details] [associations]
symbol:GSU1166 "TPR domain protein" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:1.25.40.10 RefSeq:NP_952219.1
ProteinModelPortal:Q74DZ8 GeneID:2688393 KEGG:gsu:GSU1166
PATRIC:22025104 HOGENOM:HOG000133252 OMA:NERESAC
ProtClustDB:CLSK828223 BioCyc:GSUL243231:GH27-1145-MONOMER
Uniprot:Q74DZ8
Length = 266
Score = 137 (53.3 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 43/185 (23%), Positives = 85/185 (45%)
Query: 95 LGDASLHYALGRYEEAISVLHEVIRLEEELPNSYHILGLVHDALGNTAKAMGCYWLAACY 154
LGD L L +E A++ + L+ + Y +GLV+++L T+KA+ + A
Sbjct: 79 LGDICLE--LAEHEAALAAYRRAVELDPRNADGYVNIGLVYNSLEETSKAIEAFEKALEI 136
Query: 155 KQKDSSLWKLIFPWLIEQGDTTWAMSCLSEAVKADPNDFKLKFHLASLYVELGNFQRAAD 214
+ + + G+ A+ + ++ DP D F+L LY +LG + A
Sbjct: 137 DPANVFAYNGLGDAWYGLGEREKAIDAFRKGIELDPTDAAAHFNLGELYYDLGETEEAEK 196
Query: 215 VYRQMVQLCPE-NIEALKMGAKLYQKSGQIESSVDILEDYLKGHPTEADFGVIDLLASML 273
+ V+L P+ + L +G+ LY +++ ++ LE YL+ + +D + ++L
Sbjct: 197 ECLEAVRLDPDFTMSYLTLGS-LYMDDERVKDAIRYLELYLQKEKSPQARETVDEVKAVL 255
Query: 274 VQMNA 278
+ A
Sbjct: 256 EGLRA 260
>TIGR_CMR|GSU_1166 [details] [associations]
symbol:GSU_1166 "TPR domain protein" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:1.25.40.10 RefSeq:NP_952219.1
ProteinModelPortal:Q74DZ8 GeneID:2688393 KEGG:gsu:GSU1166
PATRIC:22025104 HOGENOM:HOG000133252 OMA:NERESAC
ProtClustDB:CLSK828223 BioCyc:GSUL243231:GH27-1145-MONOMER
Uniprot:Q74DZ8
Length = 266
Score = 137 (53.3 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 43/185 (23%), Positives = 85/185 (45%)
Query: 95 LGDASLHYALGRYEEAISVLHEVIRLEEELPNSYHILGLVHDALGNTAKAMGCYWLAACY 154
LGD L L +E A++ + L+ + Y +GLV+++L T+KA+ + A
Sbjct: 79 LGDICLE--LAEHEAALAAYRRAVELDPRNADGYVNIGLVYNSLEETSKAIEAFEKALEI 136
Query: 155 KQKDSSLWKLIFPWLIEQGDTTWAMSCLSEAVKADPNDFKLKFHLASLYVELGNFQRAAD 214
+ + + G+ A+ + ++ DP D F+L LY +LG + A
Sbjct: 137 DPANVFAYNGLGDAWYGLGEREKAIDAFRKGIELDPTDAAAHFNLGELYYDLGETEEAEK 196
Query: 215 VYRQMVQLCPE-NIEALKMGAKLYQKSGQIESSVDILEDYLKGHPTEADFGVIDLLASML 273
+ V+L P+ + L +G+ LY +++ ++ LE YL+ + +D + ++L
Sbjct: 197 ECLEAVRLDPDFTMSYLTLGS-LYMDDERVKDAIRYLELYLQKEKSPQARETVDEVKAVL 255
Query: 274 VQMNA 278
+ A
Sbjct: 256 EGLRA 260
>RGD|1309134 [details] [associations]
symbol:Bbs4 "Bardet-Biedl syndrome 4" species:10116 "Rattus
norvegicus" [GO:0000226 "microtubule cytoskeleton organization"
evidence=ISO] [GO:0000242 "pericentriolar material"
evidence=IEA;ISO] [GO:0001843 "neural tube closure"
evidence=IEA;ISO] [GO:0001895 "retina homeostasis"
evidence=IEA;ISO] [GO:0003085 "negative regulation of systemic
arterial blood pressure" evidence=IEA;ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0003777 "microtubule motor
activity" evidence=IEA;ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005813 "centrosome" evidence=ISO]
[GO:0005814 "centriole" evidence=IEA;ISO] [GO:0005932 "microtubule
basal body" evidence=IEA;ISO] [GO:0007286 "spermatid development"
evidence=IEA;ISO] [GO:0007608 "sensory perception of smell"
evidence=IEA;ISO] [GO:0008104 "protein localization" evidence=ISO]
[GO:0008150 "biological_process" evidence=ND] [GO:0010629 "negative
regulation of gene expression" evidence=IEA;ISO] [GO:0016358
"dendrite development" evidence=IEA;ISO] [GO:0019216 "regulation of
lipid metabolic process" evidence=IEA;ISO] [GO:0021756 "striatum
development" evidence=IEA;ISO] [GO:0021766 "hippocampus
development" evidence=IEA;ISO] [GO:0021987 "cerebral cortex
development" evidence=IEA;ISO] [GO:0030534 "adult behavior"
evidence=IEA;ISO] [GO:0031513 "nonmotile primary cilium"
evidence=IEA;ISO] [GO:0031514 "motile cilium" evidence=ISO]
[GO:0032465 "regulation of cytokinesis" evidence=IEA;ISO]
[GO:0033205 "cell cycle cytokinesis" evidence=IEA;ISO] [GO:0033210
"leptin-mediated signaling pathway" evidence=ISO] [GO:0033365
"protein localization to organelle" evidence=ISO] [GO:0034451
"centriolar satellite" evidence=IEA;ISO] [GO:0034452 "dynactin
binding" evidence=IEA;ISO] [GO:0034454 "microtubule anchoring at
centrosome" evidence=IEA;ISO] [GO:0034464 "BBSome"
evidence=IEA;ISO] [GO:0035058 "nonmotile primary cilium assembly"
evidence=IEA;ISO] [GO:0038108 "negative regulation of appetite by
leptin-mediated signaling pathway" evidence=IEA;ISO] [GO:0040018
"positive regulation of multicellular organism growth"
evidence=IEA;ISO] [GO:0043014 "alpha-tubulin binding"
evidence=IEA;ISO] [GO:0044321 "response to leptin stimulus"
evidence=ISO] [GO:0045444 "fat cell differentiation" evidence=IEA]
[GO:0045494 "photoreceptor cell maintenance" evidence=IEA;ISO]
[GO:0045724 "positive regulation of cilium assembly"
evidence=IEA;ISO] [GO:0046548 "retinal rod cell development"
evidence=IEA;ISO] [GO:0048487 "beta-tubulin binding"
evidence=IEA;ISO] [GO:0048854 "brain morphogenesis"
evidence=IEA;ISO] [GO:0051297 "centrosome organization"
evidence=IEA;ISO] [GO:0051457 "maintenance of protein location in
nucleus" evidence=IEA;ISO] [GO:0060170 "cilium membrane"
evidence=IEA;ISO] [GO:0060271 "cilium morphogenesis" evidence=ISO]
[GO:0060296 "regulation of cilium beat frequency involved in
ciliary motility" evidence=IEA;ISO] [GO:0042384 "cilium assembly"
evidence=ISO] InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028
RGD:1309134 GO:GO:0005634 GO:GO:0021987 GO:GO:0021766 GO:GO:0005814
GO:GO:0051297 GO:GO:0007286 GO:GO:0016358 GO:GO:0040018
GO:GO:0019216 GO:GO:0045494 Gene3D:1.25.40.10 GO:GO:0007608
GO:GO:0030534 GO:GO:0001843 GO:GO:0010629 GO:GO:0005932
InterPro:IPR013105 Pfam:PF07719 GO:GO:0001895 GO:GO:0000242
GO:GO:0045444 GO:GO:0034451 GO:GO:0033205 GO:GO:0046548
GO:GO:0003777 GO:GO:0051457 GO:GO:0060170 EMBL:CH473975
GO:GO:0034464 GO:GO:0035058 GO:GO:0048854 GO:GO:0038108
GO:GO:0060296 GO:GO:0021756 CTD:585 GeneTree:ENSGT00530000063455
KO:K16531 OrthoDB:EOG4GF3DX GO:GO:0031513 GO:GO:0034454
GO:GO:0003085 GO:GO:0045724 GO:GO:0032465 IPI:IPI00869681
RefSeq:NP_001100296.1 UniGene:Rn.25002 Ensembl:ENSRNOT00000031262
GeneID:300754 KEGG:rno:300754 UCSC:RGD:1309134 NextBio:647438
Uniprot:D4A8B1
Length = 520
Score = 125 (49.1 bits), Expect = 7.8e-06, Sum P(2) = 7.8e-06
Identities = 40/216 (18%), Positives = 94/216 (43%)
Query: 72 PSLKKRGRPEGSKKKVCPEIRRMLGDASLHYALGRYEEAISVLHEVIRLEEELPN-SYHI 130
P+ + +P K P + ++ L+Y YE +V+ E ++ + L + ++
Sbjct: 13 PASIESQKPRPKKAPEFPIVEKLNWLIHLYYIRKDYEACKAVIKEQLQETQGLCEYAIYV 72
Query: 131 LGLVHDALGNTAKAMGCYWLAACYKQKDSSLWKLIFPWLIEQGDTTWAMSCLSEAVKADP 190
L+ GN +++ + A + + K + L G A +EA K +
Sbjct: 73 QALIFRLEGNIQESLELFQTCAVLSPQCADNLKQVARSLFLLGKHKAATEVYNEAAKLNQ 132
Query: 191 NDFKLKFHLASLYVELGNFQRAADVYRQMVQLCPENIEALKMGAKLYQKSGQIESSVDIL 250
D+++ +L Y L F +A D +QL ++ + +G K++ G ++ +++I
Sbjct: 133 KDWEICHNLGVCYTYLKQFSKAQDQLHSALQLNKHDLTYIMLG-KIHLLQGDLDKAIEIY 191
Query: 251 EDYLKGHPTEADFGVIDLLASMLVQMNAYDRVLKHI 286
+ ++ P + ++ L + +Q+ Y + +H+
Sbjct: 192 KKAVEFSPENTE--LLTTLGLLYLQLGVYQKAFEHL 225
Score = 108 (43.1 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 36/143 (25%), Positives = 65/143 (45%)
Query: 102 YALGRYEEAISVLHEVIRLEEELPNSYHILGLVHDALGNTAKAMGCYWLAACYKQKDSSL 161
+ LG+++ A V +E +L ++ H LG+ + L +KA A + D +
Sbjct: 112 FLLGKHKAATEVYNEAAKLNQKDWEICHNLGVCYTYLKQFSKAQDQLHSALQLNKHDLTY 171
Query: 162 WKLIFPWLIEQGDTTWAMSCLSEAVKADPNDFKLKFHLASLYVELGNFQRAADVYRQMVQ 221
L L+ QGD A+ +AV+ P + +L L LY++LG +Q+A + +
Sbjct: 172 IMLGKIHLL-QGDLDKAIEIYKKAVEFSPENTELLTTLGLLYLQLGVYQKAFEHLGNALT 230
Query: 222 LCPENIEALKMGAKLYQKSGQIE 244
P N +A+ + Q G +
Sbjct: 231 YDPANYKAILAAGSMMQTHGDFD 253
Score = 61 (26.5 bits), Expect = 7.8e-06, Sum P(2) = 7.8e-06
Identities = 20/68 (29%), Positives = 34/68 (50%)
Query: 614 TMISHHQDAAREYLEAYKLLPENPLINLCVGTALINLALGVRLQNKHQCVAQGLAFLYNN 673
T + ++A R Y+EA +L NPL+NL L N ++Q + + + FL +N
Sbjct: 349 TNLEDIENAKRAYVEAVRLDKCNPLVNLNYAVLLYNQGEKKGALAQYQEMEKKVHFLKDN 408
Query: 674 LRLAENSQ 681
L +S+
Sbjct: 409 NPLEFDSE 416
>UNIPROTKB|Q747S4 [details] [associations]
symbol:GSU3191 "TPR domain protein" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:1.25.40.10 RefSeq:NP_954232.1
ProteinModelPortal:Q747S4 GeneID:2688377 KEGG:gsu:GSU3191
PATRIC:22029237 HOGENOM:HOG000129399 OMA:THTRAWI
ProtClustDB:CLSK829148 BioCyc:GSUL243231:GH27-3141-MONOMER
Uniprot:Q747S4
Length = 638
Score = 140 (54.3 bits), Expect = 8.2e-06, P = 8.2e-06
Identities = 65/289 (22%), Positives = 130/289 (44%)
Query: 61 RKRSREASKKYPSLKKRGRPEGSKKKVCPEIRRMLGDASLHYALGRYEEAISVLHEVIRL 120
R R A+K++P + R ++ E+ L A A G ++AI+ E++R+
Sbjct: 271 RGDERMAAKEFPKAVEEYRAALKERPGSAEVLHKLSGAQA--AAGLDDDAIASYRELLRV 328
Query: 121 EEELPNSYHILGLVHDALGNTAKAMGCYWLAACYKQKDSSLWKLIFPWLIEQGDTTWAMS 180
+ +++ LG++++ G +A+ Y A + + + +G A+
Sbjct: 329 KPGNAANHYNLGIIYERKGLIDEAVVEYKQAVRLSAEHGDARRRLADIYTLRGSHPQAIE 388
Query: 181 CLSEAVKADPNDFKLKFHLASLYVELGNFQRAADVYRQMVQLCPENIEALKMGAKLYQKS 240
E +K ++ L LA ++ N + A Y + ++L P+N+EA + A +Y+K
Sbjct: 389 QYRELLKRGDSNPVLHLKLARGFMSSKNTKDAIASYNEALKLDPDNLEAHRELAAVYRKL 448
Query: 241 GQIESSVDILEDYLKGHPTEADFGVIDLLASMLVQMNAYDRVLKHIELVDLVYYSGKELL 300
Q++ + + L+ +A+ ++L ++ V+ YD ELV L+ G EL
Sbjct: 449 NQMDDASKQYREVLRIKKDDAE--ARNILTAIYVKEKKYD------ELVPLLQ-EGVELA 499
Query: 301 L--ALK-IKAGICHIQLGNTDKAEILLTAIHWENVSDHAESINEIADLF 346
A+ K G+ H + D AE+ E DHA+++N + ++
Sbjct: 500 PNDAMSHYKLGLIHEFRKDYDSAEVSYRKAT-ELKDDHAKALNALGRIY 547
Score = 132 (51.5 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 84/346 (24%), Positives = 149/346 (43%)
Query: 77 RGRPEGSKKKVCPEIRRMLGDASLH-YALGRYEEAISVLHEVIRLEEELPNSYHILGLVH 135
R E SK + + ++ + SL+ AL Y EA+ L + + +L Y G
Sbjct: 121 RALAEDSKPRYHQGLGKIFAERSLYSLALYHYAEALRELPDDPSIRVDLAQVYRQAGKKE 180
Query: 136 DALGNTAKAMGCYWLAACYKQKDSSLWKLIFPWLIEQGDTTWAMSCLSEAVKADPNDFKL 195
+A KA+ +A + +L L + G T A+ L +A A+P + +
Sbjct: 181 EAEKELKKALT---VAPANENARLALASLY----LADGRTEGAVQELKQAQLANPGNRGI 233
Query: 196 KFHLASLYVELGNFQRAADVY----RQMVQLCPENIEALKMGAKLYQKSGQIESSVDILE 251
LA Y +LG+ + A Y RQ L PE E L+ G + + + +V+
Sbjct: 234 HLLLAEAYEKLGDRKAAEYEYTLSGRQRGVL-PE--EYLRRGDER-MAAKEFPKAVEEYR 289
Query: 252 DYLKGHPTEADFGVIDLLASMLVQMNAYD-RVLKHIELVDLVYYSGKELLLALKIKAGIC 310
LK P A+ V+ L+ D + + EL+ + K A GI
Sbjct: 290 AALKERPGSAE--VLHKLSGAQAAAGLDDDAIASYRELLRV-----KPGNAANHYNLGII 342
Query: 311 HIQLGNTDKAEI-LLTAIHWENVSDHAESINEIADLFKNRELYSTALKYYHMLEANAGVH 369
+ + G D+A + A+ ++H ++ +AD++ R + A++ Y L G
Sbjct: 343 YERKGLIDEAVVEYKQAVRLS--AEHGDARRRLADIYTLRGSHPQAIEQYREL-LKRGDS 399
Query: 370 NDGCLHLKIAECSLALKEREKSIIYFYKALQILEDNIDARLTLASL 415
N LHLK+A ++ K + +I + +AL++ DN++A LA++
Sbjct: 400 NP-VLHLKLARGFMSSKNTKDAIASYNEALKLDPDNLEAHRELAAV 444
Score = 120 (47.3 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 38/123 (30%), Positives = 64/123 (52%)
Query: 308 GICHIQLGNTDKAEILLT-AIHWENVSDHAESINEIADLFKNRELYSTALKYYHMLEANA 366
G+ + G+ D+A + LT A+ ++ + + + +I F R LYS AL YH EA
Sbjct: 103 GLALLAKGSADEAVVELTRALAEDSKPRYHQGLGKI---FAERSLYSLAL--YHYAEALR 157
Query: 367 GVHNDGCLHLKIAECSLALKEREKSIIYFYKALQILEDNIDARLTLASLLLEDAKDEEAI 426
+ +D + + +A+ ++E++ KAL + N +ARL LASL L D + E A+
Sbjct: 158 ELPDDPSIRVDLAQVYRQAGKKEEAEKELKKALTVAPANENARLALASLYLADGRTEGAV 217
Query: 427 SLL 429
L
Sbjct: 218 QEL 220
Score = 112 (44.5 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 55/222 (24%), Positives = 98/222 (44%)
Query: 60 SRKRSREASKKYPSLKKRGRPEGSKKKVCPEIRRMLGD-ASLHYALG-------RYEEAI 111
+++R EA + SL G E ++ I D A+ H+ G R+++A+
Sbjct: 25 AQERCWEAKRLVKSLS--GEDEDARANTEKRILEYCSDGAAGHFVKGLRAEREKRFDQAV 82
Query: 112 SVLHEVIRLEEELPNSYHILGLVHDALGNTAKAMGCYWLAACYKQKD---SSLWKLIFPW 168
+ E +R++ P++ LGL A G+ +A+ A K L K IF
Sbjct: 83 TEYRETLRMDPSFPDAQGSLGLALLAKGSADEAVVELTRALAEDSKPRYHQGLGK-IFA- 140
Query: 169 LIEQGDTTWAMSCLSEAVKADPNDFKLKFHLASLYVELGNFQRAADVYRQMVQLCPENIE 228
E+ + A+ +EA++ P+D ++ LA +Y + G + A ++ + + P N
Sbjct: 141 --ERSLYSLALYHYAEALRELPDDPSIRVDLAQVYRQAGKKEEAEKELKKALTVAPANEN 198
Query: 229 ALKMGAKLYQKSGQIESSVDILEDYLKGHPTEADFGVIDLLA 270
A A LY G+ E +V L+ +P + G+ LLA
Sbjct: 199 ARLALASLYLADGRTEGAVQELKQAQLANP--GNRGIHLLLA 238
Score = 66 (28.3 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 27/104 (25%), Positives = 46/104 (44%)
Query: 613 FTMISHHQDAAREYLEAYKLLPENPLINLCVGTALINLALG-VRLQNKHQCVAQGLAFLY 671
+T+ H A +Y E K NP+++L LA G + +N +A Y
Sbjct: 377 YTLRGSHPQAIEQYRELLKRGDSNPVLHL-------KLARGFMSSKNTKDAIAS-----Y 424
Query: 672 NN-LRLAENSQEALYNIARAYHHVGLVSLAASYYEKVLAMYQKD 714
N L+L ++ EA +A Y + + A+ Y +VL + + D
Sbjct: 425 NEALKLDPDNLEAHRELAAVYRKLNQMDDASKQYREVLRIKKDD 468
Score = 58 (25.5 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 14/61 (22%), Positives = 33/61 (54%)
Query: 375 HLKIAECSLALKEREKSIIYFYKALQILEDNIDARLTLASLLLEDAKDEEAISLLTPPMS 434
H ++A L + + + + + L+I +D+ +AR L ++ +++ K +E + LL +
Sbjct: 438 HRELAAVYRKLNQMDDASKQYREVLRIKKDDAEARNILTAIYVKEKKYDELVPLLQEGVE 497
Query: 435 L 435
L
Sbjct: 498 L 498
>TIGR_CMR|GSU_3191 [details] [associations]
symbol:GSU_3191 "TPR domain protein" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:1.25.40.10 RefSeq:NP_954232.1
ProteinModelPortal:Q747S4 GeneID:2688377 KEGG:gsu:GSU3191
PATRIC:22029237 HOGENOM:HOG000129399 OMA:THTRAWI
ProtClustDB:CLSK829148 BioCyc:GSUL243231:GH27-3141-MONOMER
Uniprot:Q747S4
Length = 638
Score = 140 (54.3 bits), Expect = 8.2e-06, P = 8.2e-06
Identities = 65/289 (22%), Positives = 130/289 (44%)
Query: 61 RKRSREASKKYPSLKKRGRPEGSKKKVCPEIRRMLGDASLHYALGRYEEAISVLHEVIRL 120
R R A+K++P + R ++ E+ L A A G ++AI+ E++R+
Sbjct: 271 RGDERMAAKEFPKAVEEYRAALKERPGSAEVLHKLSGAQA--AAGLDDDAIASYRELLRV 328
Query: 121 EEELPNSYHILGLVHDALGNTAKAMGCYWLAACYKQKDSSLWKLIFPWLIEQGDTTWAMS 180
+ +++ LG++++ G +A+ Y A + + + +G A+
Sbjct: 329 KPGNAANHYNLGIIYERKGLIDEAVVEYKQAVRLSAEHGDARRRLADIYTLRGSHPQAIE 388
Query: 181 CLSEAVKADPNDFKLKFHLASLYVELGNFQRAADVYRQMVQLCPENIEALKMGAKLYQKS 240
E +K ++ L LA ++ N + A Y + ++L P+N+EA + A +Y+K
Sbjct: 389 QYRELLKRGDSNPVLHLKLARGFMSSKNTKDAIASYNEALKLDPDNLEAHRELAAVYRKL 448
Query: 241 GQIESSVDILEDYLKGHPTEADFGVIDLLASMLVQMNAYDRVLKHIELVDLVYYSGKELL 300
Q++ + + L+ +A+ ++L ++ V+ YD ELV L+ G EL
Sbjct: 449 NQMDDASKQYREVLRIKKDDAE--ARNILTAIYVKEKKYD------ELVPLLQ-EGVELA 499
Query: 301 L--ALK-IKAGICHIQLGNTDKAEILLTAIHWENVSDHAESINEIADLF 346
A+ K G+ H + D AE+ E DHA+++N + ++
Sbjct: 500 PNDAMSHYKLGLIHEFRKDYDSAEVSYRKAT-ELKDDHAKALNALGRIY 547
Score = 132 (51.5 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 84/346 (24%), Positives = 149/346 (43%)
Query: 77 RGRPEGSKKKVCPEIRRMLGDASLH-YALGRYEEAISVLHEVIRLEEELPNSYHILGLVH 135
R E SK + + ++ + SL+ AL Y EA+ L + + +L Y G
Sbjct: 121 RALAEDSKPRYHQGLGKIFAERSLYSLALYHYAEALRELPDDPSIRVDLAQVYRQAGKKE 180
Query: 136 DALGNTAKAMGCYWLAACYKQKDSSLWKLIFPWLIEQGDTTWAMSCLSEAVKADPNDFKL 195
+A KA+ +A + +L L + G T A+ L +A A+P + +
Sbjct: 181 EAEKELKKALT---VAPANENARLALASLY----LADGRTEGAVQELKQAQLANPGNRGI 233
Query: 196 KFHLASLYVELGNFQRAADVY----RQMVQLCPENIEALKMGAKLYQKSGQIESSVDILE 251
LA Y +LG+ + A Y RQ L PE E L+ G + + + +V+
Sbjct: 234 HLLLAEAYEKLGDRKAAEYEYTLSGRQRGVL-PE--EYLRRGDER-MAAKEFPKAVEEYR 289
Query: 252 DYLKGHPTEADFGVIDLLASMLVQMNAYD-RVLKHIELVDLVYYSGKELLLALKIKAGIC 310
LK P A+ V+ L+ D + + EL+ + K A GI
Sbjct: 290 AALKERPGSAE--VLHKLSGAQAAAGLDDDAIASYRELLRV-----KPGNAANHYNLGII 342
Query: 311 HIQLGNTDKAEI-LLTAIHWENVSDHAESINEIADLFKNRELYSTALKYYHMLEANAGVH 369
+ + G D+A + A+ ++H ++ +AD++ R + A++ Y L G
Sbjct: 343 YERKGLIDEAVVEYKQAVRLS--AEHGDARRRLADIYTLRGSHPQAIEQYREL-LKRGDS 399
Query: 370 NDGCLHLKIAECSLALKEREKSIIYFYKALQILEDNIDARLTLASL 415
N LHLK+A ++ K + +I + +AL++ DN++A LA++
Sbjct: 400 NP-VLHLKLARGFMSSKNTKDAIASYNEALKLDPDNLEAHRELAAV 444
Score = 120 (47.3 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 38/123 (30%), Positives = 64/123 (52%)
Query: 308 GICHIQLGNTDKAEILLT-AIHWENVSDHAESINEIADLFKNRELYSTALKYYHMLEANA 366
G+ + G+ D+A + LT A+ ++ + + + +I F R LYS AL YH EA
Sbjct: 103 GLALLAKGSADEAVVELTRALAEDSKPRYHQGLGKI---FAERSLYSLAL--YHYAEALR 157
Query: 367 GVHNDGCLHLKIAECSLALKEREKSIIYFYKALQILEDNIDARLTLASLLLEDAKDEEAI 426
+ +D + + +A+ ++E++ KAL + N +ARL LASL L D + E A+
Sbjct: 158 ELPDDPSIRVDLAQVYRQAGKKEEAEKELKKALTVAPANENARLALASLYLADGRTEGAV 217
Query: 427 SLL 429
L
Sbjct: 218 QEL 220
Score = 112 (44.5 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 55/222 (24%), Positives = 98/222 (44%)
Query: 60 SRKRSREASKKYPSLKKRGRPEGSKKKVCPEIRRMLGD-ASLHYALG-------RYEEAI 111
+++R EA + SL G E ++ I D A+ H+ G R+++A+
Sbjct: 25 AQERCWEAKRLVKSLS--GEDEDARANTEKRILEYCSDGAAGHFVKGLRAEREKRFDQAV 82
Query: 112 SVLHEVIRLEEELPNSYHILGLVHDALGNTAKAMGCYWLAACYKQKD---SSLWKLIFPW 168
+ E +R++ P++ LGL A G+ +A+ A K L K IF
Sbjct: 83 TEYRETLRMDPSFPDAQGSLGLALLAKGSADEAVVELTRALAEDSKPRYHQGLGK-IFA- 140
Query: 169 LIEQGDTTWAMSCLSEAVKADPNDFKLKFHLASLYVELGNFQRAADVYRQMVQLCPENIE 228
E+ + A+ +EA++ P+D ++ LA +Y + G + A ++ + + P N
Sbjct: 141 --ERSLYSLALYHYAEALRELPDDPSIRVDLAQVYRQAGKKEEAEKELKKALTVAPANEN 198
Query: 229 ALKMGAKLYQKSGQIESSVDILEDYLKGHPTEADFGVIDLLA 270
A A LY G+ E +V L+ +P + G+ LLA
Sbjct: 199 ARLALASLYLADGRTEGAVQELKQAQLANP--GNRGIHLLLA 238
Score = 66 (28.3 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 27/104 (25%), Positives = 46/104 (44%)
Query: 613 FTMISHHQDAAREYLEAYKLLPENPLINLCVGTALINLALG-VRLQNKHQCVAQGLAFLY 671
+T+ H A +Y E K NP+++L LA G + +N +A Y
Sbjct: 377 YTLRGSHPQAIEQYRELLKRGDSNPVLHL-------KLARGFMSSKNTKDAIAS-----Y 424
Query: 672 NN-LRLAENSQEALYNIARAYHHVGLVSLAASYYEKVLAMYQKD 714
N L+L ++ EA +A Y + + A+ Y +VL + + D
Sbjct: 425 NEALKLDPDNLEAHRELAAVYRKLNQMDDASKQYREVLRIKKDD 468
Score = 58 (25.5 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 14/61 (22%), Positives = 33/61 (54%)
Query: 375 HLKIAECSLALKEREKSIIYFYKALQILEDNIDARLTLASLLLEDAKDEEAISLLTPPMS 434
H ++A L + + + + + L+I +D+ +AR L ++ +++ K +E + LL +
Sbjct: 438 HRELAAVYRKLNQMDDASKQYREVLRIKKDDAEARNILTAIYVKEKKYDELVPLLQEGVE 497
Query: 435 L 435
L
Sbjct: 498 L 498
>DICTYBASE|DDB_G0286251 [details] [associations]
symbol:dnajc3 "TPR repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0006469 "negative
regulation of protein kinase activity" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0004860 "protein kinase inhibitor
activity" evidence=ISS] [GO:0006986 "response to unfolded protein"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005788
"endoplasmic reticulum lumen" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR001440
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF00515 PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028
InterPro:IPR001623 InterPro:IPR018253 dictyBase:DDB_G0286251
Pfam:PF00226 GO:GO:0005737 GO:GO:0005576 GO:GO:0006457
GenomeReviews:CM000153_GR GO:GO:0004860 GO:GO:0005788
Gene3D:1.25.40.10 EMBL:AAFI02000085 eggNOG:COG0484
Gene3D:1.10.287.110 PRINTS:PR00625 SMART:SM00271 SUPFAM:SSF46565
PROSITE:PS00636 PROSITE:PS50076 GO:GO:0006986 HSSP:P08622 KO:K09523
RefSeq:XP_637810.1 ProteinModelPortal:Q54M21
EnsemblProtists:DDB0233602 GeneID:8625524 KEGG:ddi:DDB_G0286251
OMA:RESEHAN ProtClustDB:CLSZ2846697 Uniprot:Q54M21
Length = 502
Score = 109 (43.4 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 22/81 (27%), Positives = 48/81 (59%)
Query: 171 EQGDTTWAMSCLSEAVKADPNDFKLKFHLASLYVELGNFQRAADVYRQMVQLCPENIEAL 230
++G A+S L+ A++A+P++ + A + LG F+ A D Y++++++ P+N +A
Sbjct: 81 QKGKNILALSDLNRAIEANPDNIHARLKRAKIQSSLGRFEEAMDEYKRVLKIRPDNSQAK 140
Query: 231 KMGAKLYQKSGQIESSVDILE 251
+ KL + Q+E D+++
Sbjct: 141 QQIEKLKKVEQQLEKVRDMVK 161
Score = 73 (30.8 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 35/139 (25%), Positives = 69/139 (49%)
Query: 293 YYSGKELLLALK-IKAGICHIQLGNTDKAEILLTAIHWENVSDHAESINEIADLFKNREL 351
++S E +A+K +K G+ NT+ ++ T +E + +A+ +LF N++
Sbjct: 228 FFSMGEKEIAMKFLKEGL-KFDPDNTNCRAMIKTINKFEKSTANAQ------ELF-NQQK 279
Query: 352 YSTALKYYH---MLEANAGVHNDGCLHLKIAECSLALKEREKSIIYFYKALQILEDNIDA 408
Y AL +E N+ H+ L+L +C L +K+ ++SI +AL++ E N DA
Sbjct: 280 YQDALGQIEDALEIEPNSPTHSTP-LYLLKCKCLLKVKKGKESIEACNRALELDELNADA 338
Query: 409 RLTLASLLLEDAKDEEAIS 427
A + + ++A++
Sbjct: 339 LYNRAEAYMYEEDYQKALN 357
>TAIR|locus:2103025 [details] [associations]
symbol:SEC "secret agent" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM] [GO:0006493 "protein
O-linked glycosylation" evidence=ISS;IDA] [GO:0016757 "transferase
activity, transferring glycosyl groups" evidence=ISS;IDA]
InterPro:IPR001440 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF00515 PROSITE:PS50005 PROSITE:PS50293
SMART:SM00028 UniPathway:UPA00378 GO:GO:0007275 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0016757 GO:GO:0006493
Gene3D:1.25.40.10 EMBL:AC016829 CAZy:GT41 eggNOG:COG3914
HOGENOM:HOG000003765 KO:K09667 OMA:LAYMPNT EMBL:AF441079
EMBL:AY090938 EMBL:AY117340 IPI:IPI00524518 RefSeq:NP_187074.1
UniGene:At.27850 UniGene:At.71305 ProteinModelPortal:Q9M8Y0
SMR:Q9M8Y0 IntAct:Q9M8Y0 STRING:Q9M8Y0 PaxDb:Q9M8Y0 PRIDE:Q9M8Y0
EnsemblPlants:AT3G04240.1 GeneID:819579 KEGG:ath:AT3G04240
TAIR:At3g04240 InParanoid:Q9M8Y0 PhylomeDB:Q9M8Y0
ProtClustDB:CLSN2684273 Genevestigator:Q9M8Y0 GermOnline:AT3G04240
Uniprot:Q9M8Y0
Length = 977
Score = 132 (51.5 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 41/161 (25%), Positives = 68/161 (42%)
Query: 98 ASLHYALGRYEEAISVLHEVIRLEEELPNSYHILGLVHDALGNTAKAMGCYWLAACYKQK 157
AS + GR EA + + L L +++ LG + A G +A CY A +
Sbjct: 162 ASAYMRKGRLSEATQCCQQALSLNPLLVDAHSNLGNLMKAQGLIHEAYSCYLEAVRIQPT 221
Query: 158 DSSLWKLIFPWLIEQGDTTWAMSCLSEAVKADPNDFKLKFHLASLYVELGNFQRAADVYR 217
+ W + +E GD A+ EAVK P +L ++Y LG A Y+
Sbjct: 222 FAIAWSNLAGLFMESGDLNRALQYYKEAVKLKPAFPDAYLNLGNVYKALGRPTEAIMCYQ 281
Query: 218 QMVQLCPENIEALKMGAKLYQKSGQIESSVDILEDYLKGHP 258
+Q+ P + A A +Y + GQ++ ++ + L P
Sbjct: 282 HALQMRPNSAMAFGNIASIYYEQGQLDLAIRHYKQALSRDP 322
Score = 108 (43.1 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 33/164 (20%), Positives = 69/164 (42%)
Query: 99 SLHYALGRYEEAISVLHEVIRLEEELPNSYHILGLVHDALGNTAKAMGCYWLAACYKQKD 158
+++Y L Y+ I+ E +R++ + Y + G+T +A+ Y +A +
Sbjct: 95 AIYYQLQEYDMCIARNEEALRIQPQFAECYGNMANAWKEKGDTDRAIRYYLIAIELRPNF 154
Query: 159 SSLWKLIFPWLIEQGDTTWAMSCLSEAVKADPNDFKLKFHLASLYVELGNFQRAADVYRQ 218
+ W + + +G + A C +A+ +P +L +L G A Y +
Sbjct: 155 ADAWSNLASAYMRKGRLSEATQCCQQALSLNPLLVDAHSNLGNLMKAQGLIHEAYSCYLE 214
Query: 219 MVQLCPENIEALKMGAKLYQKSGQIESSVDILEDYLKGHPTEAD 262
V++ P A A L+ +SG + ++ ++ +K P D
Sbjct: 215 AVRIQPTFAIAWSNLAGLFMESGDLNRALQYYKEAVKLKPAFPD 258
Score = 68 (29.0 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 28/88 (31%), Positives = 39/88 (44%)
Query: 622 AAREYLEAYKLLPENPLINLCVGTALINLALGVRLQNKHQCVAQGLAFLYNNLRLAENSQ 681
A + Y EA KL P P L +G + ALG R C L ++ NS
Sbjct: 242 ALQYYKEAVKLKPAFPDAYLNLGN--VYKALG-RPTEAIMCYQHAL-------QMRPNSA 291
Query: 682 EALYNIARAYHHVGLVSLAASYYEKVLA 709
A NIA Y+ G + LA +Y++ L+
Sbjct: 292 MAFGNIASIYYEQGQLDLAIRHYKQALS 319
Score = 55 (24.4 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 36/153 (23%), Positives = 58/153 (37%)
Query: 610 GHQFTMISHHQDAAREYLEAYKLLPENPLINLCVGTALIN---LALGVRLQNKHQCVAQG 666
G+ I +A R Y + L P +P +G + + L V G
Sbjct: 332 GNALKDIGRVDEAVRCYNQCLALQPNHPQAMANLGNIYMEWNMMGPASSLFKATLAVTTG 391
Query: 667 LAFLYNNLRLAENSQEALYNIARAYHHVGLVS-LAASYYEKVLAMYQK-DCIIPGFPDHM 724
L+ +NNL + Q + Y+ V + LAA Y++ + D+M
Sbjct: 392 LSAPFNNLAIIYKQQGNYSDAISCYNEVLRIDPLAADALVNRGNTYKEIGRVTEAIQDYM 451
Query: 725 E--DWKPGHSDLRREAAYNLHLIYKKSGAVDLA 755
+++P + EA NL YK SG V+ A
Sbjct: 452 HAINFRPTMA----EAHANLASAYKDSGHVEAA 480
Score = 44 (20.5 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 682 EALYNIARAYHHVGLVSLAASYYEKVLAM 710
EA N+A AY G V A + Y++ L +
Sbjct: 462 EAHANLASAYKDSGHVEAAITSYKQALLL 490
>UNIPROTKB|F1SI91 [details] [associations]
symbol:BBS4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060296 "regulation of cilium beat frequency involved
in ciliary motility" evidence=IEA] [GO:0060170 "cilium membrane"
evidence=IEA] [GO:0051457 "maintenance of protein location in
nucleus" evidence=IEA] [GO:0051297 "centrosome organization"
evidence=IEA] [GO:0048854 "brain morphogenesis" evidence=IEA]
[GO:0048487 "beta-tubulin binding" evidence=IEA] [GO:0046548
"retinal rod cell development" evidence=IEA] [GO:0045724 "positive
regulation of cilium assembly" evidence=IEA] [GO:0045494
"photoreceptor cell maintenance" evidence=IEA] [GO:0045444 "fat
cell differentiation" evidence=IEA] [GO:0043014 "alpha-tubulin
binding" evidence=IEA] [GO:0040018 "positive regulation of
multicellular organism growth" evidence=IEA] [GO:0038108 "negative
regulation of appetite by leptin-mediated signaling pathway"
evidence=IEA] [GO:0035058 "nonmotile primary cilium assembly"
evidence=IEA] [GO:0034464 "BBSome" evidence=IEA] [GO:0034454
"microtubule anchoring at centrosome" evidence=IEA] [GO:0034452
"dynactin binding" evidence=IEA] [GO:0034451 "centriolar satellite"
evidence=IEA] [GO:0033205 "cell cycle cytokinesis" evidence=IEA]
[GO:0032465 "regulation of cytokinesis" evidence=IEA] [GO:0031513
"nonmotile primary cilium" evidence=IEA] [GO:0030534 "adult
behavior" evidence=IEA] [GO:0021987 "cerebral cortex development"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021756 "striatum development" evidence=IEA] [GO:0019216
"regulation of lipid metabolic process" evidence=IEA] [GO:0016358
"dendrite development" evidence=IEA] [GO:0010629 "negative
regulation of gene expression" evidence=IEA] [GO:0007608 "sensory
perception of smell" evidence=IEA] [GO:0007286 "spermatid
development" evidence=IEA] [GO:0005932 "microtubule basal body"
evidence=IEA] [GO:0005814 "centriole" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003777 "microtubule motor activity"
evidence=IEA] [GO:0003085 "negative regulation of systemic arterial
blood pressure" evidence=IEA] [GO:0001895 "retina homeostasis"
evidence=IEA] [GO:0001843 "neural tube closure" evidence=IEA]
[GO:0000242 "pericentriolar material" evidence=IEA]
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028 GO:GO:0005634
GO:GO:0021987 GO:GO:0021766 GO:GO:0005814 GO:GO:0051297
GO:GO:0007286 GO:GO:0016358 GO:GO:0040018 GO:GO:0019216
GO:GO:0045494 Gene3D:1.25.40.10 GO:GO:0007608 GO:GO:0030534
GO:GO:0001843 GO:GO:0010629 GO:GO:0005932 InterPro:IPR013105
Pfam:PF07719 GO:GO:0001895 GO:GO:0000242 GO:GO:0045444
GO:GO:0034451 GO:GO:0033205 GO:GO:0046548 GO:GO:0003777
GO:GO:0051457 GO:GO:0060170 GO:GO:0034464 GO:GO:0035058
GO:GO:0048854 GO:GO:0038108 GO:GO:0060296 GO:GO:0021756
GeneTree:ENSGT00530000063455 OMA:YNQGEKR GO:GO:0031513
GO:GO:0034454 GO:GO:0003085 GO:GO:0045724 GO:GO:0032465
EMBL:CU571030 Ensembl:ENSSSCT00000002153 Uniprot:F1SI91
Length = 512
Score = 119 (46.9 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 35/188 (18%), Positives = 84/188 (44%)
Query: 100 LHYALGRYEEAISVLHEVIRLEEELPN-SYHILGLVHDALGNTAKAMGCYWLAACYKQKD 158
LHY YE +++ E ++ + L + ++ L+ GN +++ + A +
Sbjct: 32 LHYIRKDYEACKAIIXEQLQETQGLCEYAIYVQALIFRLEGNIQESLELFQTCAILSPQC 91
Query: 159 SSLWKLIFPWLIEQGDTTWAMSCLSEAVKADPNDFKLKFHLASLYVELGNFQRAADVYRQ 218
+ K + L G A +EA K + D+++ +L Y+ L F +A D
Sbjct: 92 ADNLKQVARSLFLLGKHKAATEVYNEAAKLNQKDWEICHNLGVCYIYLKQFDKAQDQLHN 151
Query: 219 MVQLCPENIEALKMGAKLYQKSGQIESSVDILEDYLKGHPTEADFGVIDLLASMLVQMNA 278
+ L ++ + +G K++ G ++ +++I + ++ P + ++ L + +Q+
Sbjct: 152 ALHLNRHDLTYIMLG-KIHLLEGDLDKAIEIYKKAVEFSPENTE--LLTTLGLLYLQLGI 208
Query: 279 YDRVLKHI 286
Y + +H+
Sbjct: 209 YQKAFEHL 216
Score = 56 (24.8 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 14/36 (38%), Positives = 19/36 (52%)
Query: 614 TMISHHQDAAREYLEAYKLLPENPLINLCVGTALIN 649
T + ++A R Y EA +L NPL+NL L N
Sbjct: 340 TNLEDLENAKRAYAEAVRLDKCNPLVNLNYAVLLYN 375
>TAIR|locus:2080722 [details] [associations]
symbol:SPY "SPINDLY" species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0016757
"transferase activity, transferring glycosyl groups" evidence=ISS]
[GO:0016262 "protein N-acetylglucosaminyltransferase activity"
evidence=TAS] [GO:0009938 "negative regulation of gibberellic acid
mediated signaling pathway" evidence=IGI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009736 "cytokinin mediated signaling pathway" evidence=IMP]
[GO:0005829 "cytosol" evidence=IDA] [GO:2000377 "regulation of
reactive oxygen species metabolic process" evidence=IMP]
[GO:0000278 "mitotic cell cycle" evidence=RCA] [GO:0000956
"nuclear-transcribed mRNA catabolic process" evidence=RCA]
[GO:0006346 "methylation-dependent chromatin silencing"
evidence=RCA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0006396 "RNA processing"
evidence=RCA] [GO:0016246 "RNA interference" evidence=RCA]
[GO:0043687 "post-translational protein modification" evidence=RCA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA] InterPro:IPR001440 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF00515 PROSITE:PS50005
PROSITE:PS50293 SMART:SM00028 UniPathway:UPA00378 GO:GO:0005829
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0030154
GO:GO:0006486 GO:GO:0048511 GO:GO:0009736 Gene3D:1.25.40.10
InterPro:IPR006597 SMART:SM00671 GO:GO:0009908 GO:GO:0016262
EMBL:AC008153 GO:GO:2000377 GO:GO:0009740 GO:GO:0009938 CAZy:GT41
eggNOG:COG3914 EMBL:U62135 EMBL:AK220931 EMBL:AK221192
EMBL:AK221314 IPI:IPI00544177 RefSeq:NP_187761.1 UniGene:At.17656
ProteinModelPortal:Q96301 SMR:Q96301 IntAct:Q96301 STRING:Q96301
PaxDb:Q96301 PRIDE:Q96301 ProMEX:Q96301 EnsemblPlants:AT3G11540.1
GeneID:820327 KEGG:ath:AT3G11540 GeneFarm:5156 TAIR:At3g11540
HOGENOM:HOG000030819 InParanoid:Q96301 OMA:GVPCVTM PhylomeDB:Q96301
ProtClustDB:CLSN2684418 Genevestigator:Q96301 Uniprot:Q96301
Length = 914
Score = 93 (37.8 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 33/144 (22%), Positives = 64/144 (44%)
Query: 66 EASKKYPSLKKRGRPEGSKKKVCPEIRRMLGDASLHYAL-GRYEEAISVLHEVIRLEEEL 124
EA++ Y +K + S K + +L D L G +E I +E ++++
Sbjct: 129 EAAESY---QKALMADASYKPAAECLAIVLTDLGTSLKLAGNTQEGIQKYYEALKIDPHY 185
Query: 125 PNSYHILGLVHDALGNTAKAMGCYWLAACYKQKDSSLWKLIFPWLIEQGDTTWAMSCLSE 184
+Y+ LG+V+ + A+ CY AA + + + + +GD A++C
Sbjct: 186 APAYYNLGVVYSEMMQYDNALSCYEKAALERPMYAEAYCNMGVIYKNRGDLEMAITCYER 245
Query: 185 AVKADPNDFKL-KFHLASLYVELG 207
+ PN F++ K ++A +LG
Sbjct: 246 CLAVSPN-FEIAKNNMAIALTDLG 268
Score = 91 (37.1 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 54/241 (22%), Positives = 112/241 (46%)
Query: 198 HLASLYVELGNFQRAADVYRQMVQLCPENIEALKMGAKLYQKSGQIESSVDILEDYLKGH 257
+L LY + N +A + Y+ + + P ++L +Y G+++++ ++E + +
Sbjct: 334 NLGVLYKDRDNLDKAVECYQMALSIKPNFAQSLNNLGVVYTVQGKMDAAASMIEKAILAN 393
Query: 258 PTEAD-FGVIDLL----ASMLVQMNAYDRVLKHIELVDLVYYSGKELLLALK-IKAGICH 311
PT A+ F + +L ++ + ++AY+ LK I+ D +G+ LLA+ I G+
Sbjct: 394 PTYAEAFNNLGVLYRDAGNITMAIDAYEECLK-ID-PDS-RNAGQNRLLAMNYINEGLDD 450
Query: 312 IQLGNTDKAEILLTAIH-----WENVSDHAESINEIADLFKNRELYSTALKYYHMLEANA 366
T +H W+N+ D I I + + + ++ ++ Y+ +EA
Sbjct: 451 KLFEAHRDWGWRFTRLHPQYTSWDNLKDPERPIT-IG--YISPDFFTHSVSYF--IEAPL 505
Query: 367 GVHNDGCLHLKIAECSLALKEREKSIIYFYKALQ---ILED--NIDARLTLASLLLEDAK 421
H+D + K+ S +K K+ + K L+ + +D ID + +AS++ ED
Sbjct: 506 -THHDYTKY-KVVVYSAVVKADAKTYRFRDKVLKKGGVWKDIYGIDEK-KIASMVREDKI 562
Query: 422 D 422
D
Sbjct: 563 D 563
Score = 42 (19.8 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 502 CKTLA-SLHRYEDAIKIINLILKLGYGKFPVEKEELY 537
C T+A S+H + + +L+ K+G G + E+ Y
Sbjct: 760 CVTMAGSVHAHNVGV---SLLTKVGLGHLVAKNEDEY 793
>UNIPROTKB|Q1JQ97 [details] [associations]
symbol:BBS4 "Bardet-Biedl syndrome 4 protein homolog"
species:9913 "Bos taurus" [GO:0051297 "centrosome organization"
evidence=ISS] [GO:0003777 "microtubule motor activity"
evidence=ISS] [GO:0000242 "pericentriolar material" evidence=ISS]
[GO:0060170 "cilium membrane" evidence=IEA] [GO:0060296 "regulation
of cilium beat frequency involved in ciliary motility"
evidence=IEA] [GO:0051457 "maintenance of protein location in
nucleus" evidence=IEA] [GO:0048854 "brain morphogenesis"
evidence=IEA] [GO:0048487 "beta-tubulin binding" evidence=IEA]
[GO:0046548 "retinal rod cell development" evidence=IEA]
[GO:0045724 "positive regulation of cilium assembly" evidence=IEA]
[GO:0045494 "photoreceptor cell maintenance" evidence=IEA]
[GO:0045444 "fat cell differentiation" evidence=IEA] [GO:0043014
"alpha-tubulin binding" evidence=IEA] [GO:0040018 "positive
regulation of multicellular organism growth" evidence=IEA]
[GO:0038108 "negative regulation of appetite by leptin-mediated
signaling pathway" evidence=IEA] [GO:0035058 "nonmotile primary
cilium assembly" evidence=IEA] [GO:0034464 "BBSome" evidence=IEA]
[GO:0034454 "microtubule anchoring at centrosome" evidence=IEA]
[GO:0034452 "dynactin binding" evidence=IEA] [GO:0034451
"centriolar satellite" evidence=IEA] [GO:0033205 "cell cycle
cytokinesis" evidence=IEA] [GO:0032465 "regulation of cytokinesis"
evidence=IEA] [GO:0031513 "nonmotile primary cilium" evidence=IEA]
[GO:0030534 "adult behavior" evidence=IEA] [GO:0021987 "cerebral
cortex development" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021756 "striatum development"
evidence=IEA] [GO:0019216 "regulation of lipid metabolic process"
evidence=IEA] [GO:0016358 "dendrite development" evidence=IEA]
[GO:0010629 "negative regulation of gene expression" evidence=IEA]
[GO:0007608 "sensory perception of smell" evidence=IEA] [GO:0007286
"spermatid development" evidence=IEA] [GO:0005932 "microtubule
basal body" evidence=IEA] [GO:0005814 "centriole" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003085 "negative
regulation of systemic arterial blood pressure" evidence=IEA]
[GO:0001895 "retina homeostasis" evidence=IEA] [GO:0001843 "neural
tube closure" evidence=IEA] InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF13181 PROSITE:PS50005 PROSITE:PS50293
SMART:SM00028 GO:GO:0005634 GO:GO:0021987 GO:GO:0021766
GO:GO:0005814 GO:GO:0051297 GO:GO:0007286 GO:GO:0016358
GO:GO:0040018 GO:GO:0019216 GO:GO:0045494 eggNOG:COG0457
Gene3D:1.25.40.10 GO:GO:0007608 GO:GO:0030534 GO:GO:0001843
GO:GO:0010629 GO:GO:0005932 GO:GO:0001895 GO:GO:0000242
GO:GO:0045444 GO:GO:0034451 GO:GO:0033205 GO:GO:0046548
GO:GO:0003777 GO:GO:0051457 GO:GO:0060170 GO:GO:0034464
GO:GO:0035058 GO:GO:0048854 GO:GO:0038108 GO:GO:0060296
GO:GO:0021756 EMBL:BC116137 IPI:IPI00712192 RefSeq:NP_001069424.1
UniGene:Bt.7716 ProteinModelPortal:Q1JQ97 IntAct:Q1JQ97
STRING:Q1JQ97 PRIDE:Q1JQ97 Ensembl:ENSBTAT00000010013 GeneID:532120
KEGG:bta:532120 CTD:585 GeneTree:ENSGT00530000063455
HOGENOM:HOG000261391 HOVERGEN:HBG024456 InParanoid:Q1JQ97 KO:K16531
OMA:YNQGEKR OrthoDB:EOG4GF3DX NextBio:20875615 GO:GO:0031513
GO:GO:0034454 GO:GO:0003085 GO:GO:0045724 GO:GO:0032465
Uniprot:Q1JQ97
Length = 519
Score = 118 (46.6 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 40/221 (18%), Positives = 95/221 (42%)
Query: 67 ASKKYPSLKKRGRPEGSKKKVCPEIRRMLGDASLHYALGRYEEAISVLHEVIRLEEELPN 126
A + P + +P K P + + L+Y YE +V+ E ++ L
Sbjct: 8 ARTQLPVSAESQKPVLKKAPEFPILEKQNWLIHLYYIQKDYEACKAVIKEQLQETHGLCE 67
Query: 127 -SYHILGLVHDALGNTAKAMGCYWLAACYKQKDSSLWKLIFPWLIEQGDTTWAMSCLSEA 185
+ ++ L+ GN +++ + + A + + K + L G A+ +EA
Sbjct: 68 YAIYVQALIFRLEGNIQESLRLFQMCAFLSPQCADNLKQVARSLFLLGKHKAAIEVYNEA 127
Query: 186 VKADPNDFKLKFHLASLYVELGNFQRAADVYRQMVQLCPENIEALKMGAKLYQKSGQIES 245
K + D+++ +L Y+ L F +A D + L ++ + +G K++ G ++
Sbjct: 128 AKLNQKDWEICHNLGVCYIYLKQFDKAQDQLHNALHLNRHDLTYIMLG-KIFLLKGDLDK 186
Query: 246 SVDILEDYLKGHPTEADFGVIDLLASMLVQMNAYDRVLKHI 286
+++I + ++ P + ++ L + +Q+ Y + +H+
Sbjct: 187 AIEIYKKAVEFSPENTE--LLTTLGLLYLQLGIYQKAFEHL 225
Score = 56 (24.8 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 14/36 (38%), Positives = 19/36 (52%)
Query: 614 TMISHHQDAAREYLEAYKLLPENPLINLCVGTALIN 649
T + ++A R Y EA +L NPL+NL L N
Sbjct: 349 TNLEDSENAKRAYEEAVRLDKCNPLVNLNYAVLLYN 384
>TIGR_CMR|GSU_3023 [details] [associations]
symbol:GSU_3023 "glycosyl transferase, group 1/2 family
protein" species:243231 "Geobacter sulfurreducens PCA" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0016757
"transferase activity, transferring glycosyl groups" evidence=ISS]
InterPro:IPR001296 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF00534 PROSITE:PS50005 PROSITE:PS50293
SMART:SM00028 Pfam:PF00535 INTERPRO:IPR001173 GO:GO:0009058
GO:GO:0016740 EMBL:AE017180 GenomeReviews:AE017180_GR
Gene3D:1.25.40.10 InterPro:IPR013105 Pfam:PF07719
RefSeq:NP_954065.1 ProteinModelPortal:Q748H9 GeneID:2686804
KEGG:gsu:GSU3023 PATRIC:22028901
BioCyc:GSUL243231:GH27-3026-MONOMER Uniprot:Q748H9
Length = 2401
Score = 133 (51.9 bits), Expect = 0.00023, P = 0.00023
Identities = 89/345 (25%), Positives = 146/345 (42%)
Query: 103 ALGRYEEAISVLHEVIRLEEELPNSYHILGLVHDALGNTAK---AMGCYW--LAACYKQK 157
A GRY EAI L +++ + NS +L + D L + K A+ Y LA C
Sbjct: 1978 AEGRYVEAIEHLVKIVTAGD---NS--VLVDLGDCLASLEKYDDALALYEESLALCPTNG 2032
Query: 158 DSSLWKLIFPWLIEQGDTTWAMSCLSEAVKADPNDFKLKFHLASLYVELGNFQRAADVYR 217
+ + + ++ + A S A++ DP D K L G ++Y
Sbjct: 2033 RALVGVGVVRYMTRR--IAEAADAFSRALETDPADPKALCGLGMARCAQGRNAEGFELYG 2090
Query: 218 QMVQLCPENIEALKMGAKLYQKSGQIESSVDILEDYLKGHPTEAD--FGVIDLLASMLVQ 275
+ ++ PEN+ A+ +L + G+ + LE YL+ HP + D F LL +
Sbjct: 2091 RALEAEPENLTAVHESVRLAYELGRFSEAAKRLESYLRHHPGDIDILFASAGLLH--MAG 2148
Query: 276 MNAYDR-VLKHIELVDLVYYSGK-ELLLALKI-------KAGICHIQ-LGNTDKAEILLT 325
NA R L+ + LV YSG ELL L+ +A + L K E LT
Sbjct: 2149 RNAEARDALERL-LVFSPDYSGAMELLAKLEEQDQEPGERATEAEARRLKEDGKYEEALT 2207
Query: 326 AIHWENVSDHAESINEIAD-LFKNRELYSTALKYYHMLEANAGVHNDGCLHLKIAECSLA 384
A + + ++ ++ D L + L A +Y L+A+ G + + L + SL
Sbjct: 2208 AFSRVAEAGDSSALADMGDCLAQLGRLDEAAARYLEALDAD-GANLKALVGLGVV--SLV 2264
Query: 385 LKEREKSIIYFYKALQILEDNIDARLTLASLLLEDAKDEEAISLL 429
++ K++ +F +AL+ N A L + K +EA SLL
Sbjct: 2265 QGKQVKAVTWFNRALKADPANAKALCGLGMVRNMQNKHDEAFSLL 2309
>UNIPROTKB|Q81SV4 [details] [associations]
symbol:BAS1429 "TPR domain protein" species:1392 "Bacillus
anthracis" [GO:0003674 "molecular_function" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF13176 Pfam:PF13181
PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR
Gene3D:1.25.40.10 HOGENOM:HOG000043381 RefSeq:NP_843991.1
RefSeq:YP_018163.1 RefSeq:YP_027698.1 ProteinModelPortal:Q81SV4
DNASU:1086326 EnsemblBacteria:EBBACT00000012094
EnsemblBacteria:EBBACT00000014596 EnsemblBacteria:EBBACT00000021266
GeneID:1086326 GeneID:2816012 GeneID:2852692 KEGG:ban:BA_1541
KEGG:bar:GBAA_1541 KEGG:bat:BAS1429 OMA:AMADGEY
ProtClustDB:CLSK887498 BioCyc:BANT260799:GJAJ-1503-MONOMER
BioCyc:BANT261594:GJ7F-1565-MONOMER Uniprot:Q81SV4
Length = 420
Score = 121 (47.7 bits), Expect = 0.00050, P = 0.00050
Identities = 54/246 (21%), Positives = 109/246 (44%)
Query: 196 KFHLASLYVELGNFQRAADVYRQMVQLCPENIEALKMGAKLYQKSGQIESSVDILEDYLK 255
KF A Y+E G ++ + ++ +++ + E + A+ Y G + ++ I ED
Sbjct: 3 KFEQAVSYIENGEAEKGLQLLKEQLKIANDE-EKYDI-ARYYHTLGFTDEALSITEDLRL 60
Query: 256 GHPTEADFGVIDLLASMLVQMNAYDRVLKHIELVDLVYYSGKELLLALKIKAGICHIQLG 315
+P E++F V LA + + ++ D IE++ + + + +L + A + +Q G
Sbjct: 61 LYPEESEFTVF--LAELYIDLDKEDEA---IEVLHDIPENDDLYVQSLLLVADLFQMQ-G 114
Query: 316 NTDKAEILLTAIHWENVSDHAESINEIADLFKNRELYSTALKYYHMLEANAGVHNDGCLH 375
D AE L E + D +A+L+ ++ A+ YY L + V +
Sbjct: 115 FDDVAEQKLLKAK-EMMPDEPVITFGLAELYSSKGEEQKAITYYESLLSEHKVMGGVVIA 173
Query: 376 LKIAECSLALKEREKSIIYFYKALQILEDNIDARLTLASLLLEDAKDEEAISLLTPPMSL 435
L++ E A+ E++I Y+ L+ +D I + A L + + + AI L
Sbjct: 174 LRLGETLSAIGNWEEAISYYEAGLEEQKD-IHSLFGYAFTLYQGEEYQRAIGAWQELKEL 232
Query: 436 ENKYVN 441
+ +Y +
Sbjct: 233 DPEYAS 238
>TIGR_CMR|BA_1541 [details] [associations]
symbol:BA_1541 "TPR domain protein" species:198094
"Bacillus anthracis str. Ames" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF13176 Pfam:PF13181 PROSITE:PS50005 PROSITE:PS50293
SMART:SM00028 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR Gene3D:1.25.40.10 HOGENOM:HOG000043381
RefSeq:NP_843991.1 RefSeq:YP_018163.1 RefSeq:YP_027698.1
ProteinModelPortal:Q81SV4 DNASU:1086326
EnsemblBacteria:EBBACT00000012094 EnsemblBacteria:EBBACT00000014596
EnsemblBacteria:EBBACT00000021266 GeneID:1086326 GeneID:2816012
GeneID:2852692 KEGG:ban:BA_1541 KEGG:bar:GBAA_1541 KEGG:bat:BAS1429
OMA:AMADGEY ProtClustDB:CLSK887498
BioCyc:BANT260799:GJAJ-1503-MONOMER
BioCyc:BANT261594:GJ7F-1565-MONOMER Uniprot:Q81SV4
Length = 420
Score = 121 (47.7 bits), Expect = 0.00050, P = 0.00050
Identities = 54/246 (21%), Positives = 109/246 (44%)
Query: 196 KFHLASLYVELGNFQRAADVYRQMVQLCPENIEALKMGAKLYQKSGQIESSVDILEDYLK 255
KF A Y+E G ++ + ++ +++ + E + A+ Y G + ++ I ED
Sbjct: 3 KFEQAVSYIENGEAEKGLQLLKEQLKIANDE-EKYDI-ARYYHTLGFTDEALSITEDLRL 60
Query: 256 GHPTEADFGVIDLLASMLVQMNAYDRVLKHIELVDLVYYSGKELLLALKIKAGICHIQLG 315
+P E++F V LA + + ++ D IE++ + + + +L + A + +Q G
Sbjct: 61 LYPEESEFTVF--LAELYIDLDKEDEA---IEVLHDIPENDDLYVQSLLLVADLFQMQ-G 114
Query: 316 NTDKAEILLTAIHWENVSDHAESINEIADLFKNRELYSTALKYYHMLEANAGVHNDGCLH 375
D AE L E + D +A+L+ ++ A+ YY L + V +
Sbjct: 115 FDDVAEQKLLKAK-EMMPDEPVITFGLAELYSSKGEEQKAITYYESLLSEHKVMGGVVIA 173
Query: 376 LKIAECSLALKEREKSIIYFYKALQILEDNIDARLTLASLLLEDAKDEEAISLLTPPMSL 435
L++ E A+ E++I Y+ L+ +D I + A L + + + AI L
Sbjct: 174 LRLGETLSAIGNWEEAISYYEAGLEEQKD-IHSLFGYAFTLYQGEEYQRAIGAWQELKEL 232
Query: 436 ENKYVN 441
+ +Y +
Sbjct: 233 DPEYAS 238
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.137 0.411 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 765 755 0.00090 121 3 11 22 0.37 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 33
No. of states in DFA: 629 (67 KB)
Total size of DFA: 419 KB (2201 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 65.21u 0.11s 65.32t Elapsed: 00:00:03
Total cpu time: 65.22u 0.11s 65.33t Elapsed: 00:00:03
Start: Mon May 20 18:32:24 2013 End: Mon May 20 18:32:27 2013