Query 004259
Match_columns 765
No_of_seqs 550 out of 3518
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 19:25:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004259.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004259hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3j09_A COPA, copper-exporting 100.0 1.3E-83 4.3E-88 757.0 21.5 491 129-762 3-493 (723)
2 3rfu_A Copper efflux ATPase; a 100.0 8E-80 2.7E-84 719.3 39.4 434 282-762 73-513 (736)
3 3j08_A COPA, copper-exporting 100.0 2.8E-74 9.7E-79 668.5 10.2 411 289-762 5-415 (645)
4 1mhs_A Proton pump, plasma mem 100.0 2.6E-51 8.7E-56 487.3 19.8 329 396-761 140-480 (920)
5 2zxe_A Na, K-ATPase alpha subu 100.0 5.8E-46 2E-50 452.4 31.1 252 400-671 137-399 (1028)
6 3b8c_A ATPase 2, plasma membra 100.0 1.6E-49 5.4E-54 472.5 -7.5 286 396-703 92-383 (885)
7 3ar4_A Sarcoplasmic/endoplasmi 100.0 1.9E-44 6.5E-49 439.4 28.9 265 396-671 88-370 (995)
8 3ixz_A Potassium-transporting 100.0 1.2E-43 4E-48 432.9 31.4 255 397-671 139-404 (1034)
9 2hc8_A PACS, cation-transporti 99.9 5.7E-28 1.9E-32 214.2 10.9 111 425-541 2-112 (113)
10 2kij_A Copper-transporting ATP 99.9 7.7E-28 2.6E-32 217.3 8.4 123 419-541 2-124 (124)
11 2ew9_A Copper-transporting ATP 99.8 2.1E-20 7E-25 176.2 15.2 145 45-195 3-147 (149)
12 1p6t_A Potential copper-transp 99.8 2E-19 7E-24 169.9 16.9 140 45-198 5-144 (151)
13 2ew9_A Copper-transporting ATP 99.8 4.5E-19 1.5E-23 167.0 16.3 141 128-271 4-146 (149)
14 2rop_A Copper-transporting ATP 99.8 2E-18 6.9E-23 171.6 16.5 156 42-197 16-191 (202)
15 1p6t_A Potential copper-transp 99.8 4.5E-18 1.5E-22 160.6 16.1 137 128-273 6-142 (151)
16 2rop_A Copper-transporting ATP 99.7 5.3E-17 1.8E-21 161.3 16.2 143 127-272 19-189 (202)
17 2yj3_A Copper-transporting ATP 99.6 5.2E-19 1.8E-23 183.4 0.0 111 623-759 4-114 (263)
18 2kmv_A Copper-transporting ATP 99.6 6.2E-16 2.1E-20 149.6 10.4 76 656-750 1-79 (185)
19 2arf_A Wilson disease ATPase; 99.5 1.2E-14 3.9E-19 138.6 8.3 85 658-762 1-124 (165)
20 3a1c_A Probable copper-exporti 99.5 3.4E-14 1.1E-18 149.2 10.8 113 623-761 8-120 (287)
21 1svj_A Potassium-transporting 99.4 2.9E-13 1E-17 126.6 7.5 86 654-762 13-111 (156)
22 3dxs_X Copper-transporting ATP 99.3 9.6E-12 3.3E-16 101.5 8.9 70 128-197 2-71 (74)
23 3skx_A Copper-exporting P-type 99.2 2.7E-11 9.3E-16 125.8 11.7 106 635-762 1-106 (280)
24 4a4j_A Pacszia, cation-transpo 99.2 4.2E-11 1.4E-15 96.1 8.5 66 129-195 3-68 (69)
25 3dxs_X Copper-transporting ATP 99.2 1E-10 3.6E-15 95.3 9.0 70 45-114 1-70 (74)
26 2ofg_X Zinc-transporting ATPas 99.1 7.2E-11 2.5E-15 104.7 8.2 81 127-213 7-87 (111)
27 2ofg_X Zinc-transporting ATPas 99.1 2.8E-10 9.4E-15 100.9 10.1 83 43-139 5-87 (111)
28 3fry_A Probable copper-exporti 99.1 1.3E-10 4.4E-15 94.5 6.7 66 127-197 4-69 (73)
29 3iwl_A Copper transport protei 99.1 2.2E-10 7.6E-15 91.7 7.3 64 129-197 3-66 (68)
30 1osd_A MERP, hypothetical prot 99.0 4.4E-10 1.5E-14 90.5 8.3 68 128-195 3-70 (72)
31 4a4j_A Pacszia, cation-transpo 99.0 6E-10 2E-14 89.3 8.9 67 46-113 2-68 (69)
32 2l3m_A Copper-ION-binding prot 99.0 4.5E-10 1.5E-14 90.2 8.1 67 127-193 4-70 (71)
33 1y3j_A Copper-transporting ATP 99.0 4.3E-10 1.5E-14 92.2 7.9 70 127-196 2-71 (77)
34 3cjk_B Copper-transporting ATP 99.0 8E-10 2.7E-14 89.9 9.1 69 129-197 3-71 (75)
35 1kvi_A Copper-transporting ATP 99.0 6.3E-10 2.2E-14 91.6 8.1 69 127-195 7-75 (79)
36 2g9o_A Copper-transporting ATP 99.0 6.4E-10 2.2E-14 94.5 8.0 71 128-198 3-76 (90)
37 1cpz_A Protein (COPZ); copper 99.0 8.4E-10 2.9E-14 87.6 8.2 65 131-195 3-67 (68)
38 1aw0_A Menkes copper-transport 99.0 6.9E-10 2.4E-14 89.3 7.8 67 129-195 4-70 (72)
39 2xmw_A PACS-N, cation-transpor 99.0 8.3E-10 2.8E-14 88.5 8.2 66 129-195 4-69 (71)
40 1q8l_A Copper-transporting ATP 99.0 8.7E-10 3E-14 92.2 8.4 70 128-197 9-78 (84)
41 3fry_A Probable copper-exporti 99.0 4.5E-10 1.5E-14 91.3 6.2 67 43-114 2-68 (73)
42 2kt2_A Mercuric reductase; nme 99.0 8.4E-10 2.9E-14 88.1 7.3 64 131-195 3-66 (69)
43 1yg0_A COP associated protein; 99.0 9.9E-10 3.4E-14 86.6 7.7 64 129-193 2-65 (66)
44 2qif_A Copper chaperone COPZ; 99.0 1.4E-09 4.7E-14 86.2 8.2 65 129-193 3-67 (69)
45 3iwl_A Copper transport protei 99.0 1.1E-09 3.8E-14 87.6 7.3 65 45-114 1-65 (68)
46 2ldi_A Zinc-transporting ATPas 99.0 1.5E-09 5.1E-14 86.8 8.0 67 128-194 3-69 (71)
47 1mwy_A ZNTA; open-faced beta-s 98.9 1.9E-09 6.5E-14 87.2 8.3 66 128-195 3-68 (73)
48 1opz_A Potential copper-transp 98.9 2E-09 6.8E-14 87.5 8.4 69 127-195 5-73 (76)
49 1fvq_A Copper-transporting ATP 98.9 1.8E-09 6.1E-14 86.9 8.0 67 129-196 3-69 (72)
50 2l3m_A Copper-ION-binding prot 98.9 3.5E-09 1.2E-13 84.9 9.2 68 44-111 3-70 (71)
51 1yjr_A Copper-transporting ATP 98.9 1.7E-09 5.7E-14 87.8 7.0 67 129-195 5-71 (75)
52 1jww_A Potential copper-transp 98.9 2.5E-09 8.5E-14 88.0 7.4 69 128-196 3-71 (80)
53 1osd_A MERP, hypothetical prot 98.9 7E-09 2.4E-13 83.3 8.8 68 45-112 2-69 (72)
54 2roe_A Heavy metal binding pro 98.9 3.6E-09 1.2E-13 83.7 6.8 62 131-195 3-64 (66)
55 2qif_A Copper chaperone COPZ; 98.9 9.5E-09 3.3E-13 81.3 9.3 67 45-111 1-67 (69)
56 1y3j_A Copper-transporting ATP 98.9 2.9E-09 9.8E-14 87.2 6.3 70 44-113 1-70 (77)
57 1cc8_A Protein (metallochapero 98.9 7E-09 2.4E-13 84.1 8.5 65 128-196 5-70 (73)
58 1kvi_A Copper-transporting ATP 98.8 6.4E-09 2.2E-13 85.4 8.0 70 44-113 6-75 (79)
59 1q8l_A Copper-transporting ATP 98.8 7.6E-09 2.6E-13 86.4 8.4 70 45-114 8-77 (84)
60 2g9o_A Copper-transporting ATP 98.8 9.1E-09 3.1E-13 87.2 8.7 70 46-115 3-75 (90)
61 3cjk_B Copper-transporting ATP 98.8 1.3E-08 4.5E-13 82.5 9.3 67 47-113 3-69 (75)
62 2kkh_A Putative heavy metal tr 98.8 9.5E-09 3.3E-13 88.0 8.7 71 127-197 15-85 (95)
63 1mwy_A ZNTA; open-faced beta-s 98.8 1.2E-08 4.1E-13 82.4 8.8 67 44-112 1-67 (73)
64 2kyz_A Heavy metal binding pro 98.8 2.7E-09 9.2E-14 84.8 4.7 61 130-195 3-63 (67)
65 1aw0_A Menkes copper-transport 98.8 8.4E-09 2.9E-13 82.8 7.6 67 46-112 3-69 (72)
66 1opz_A Potential copper-transp 98.8 1.6E-08 5.5E-13 81.9 9.3 69 44-112 4-72 (76)
67 2xmw_A PACS-N, cation-transpor 98.8 1.3E-08 4.3E-13 81.4 8.5 66 46-112 3-68 (71)
68 1yg0_A COP associated protein; 98.8 1.3E-08 4.4E-13 80.1 8.2 64 47-111 2-65 (66)
69 2xmm_A SSR2857 protein, ATX1; 98.8 5.9E-09 2E-13 81.5 5.7 61 130-193 3-63 (64)
70 2k2p_A Uncharacterized protein 98.8 4.8E-09 1.7E-13 87.9 5.5 64 127-193 21-84 (85)
71 1cpz_A Protein (COPZ); copper 98.8 1.6E-08 5.6E-13 80.0 8.3 64 49-112 3-66 (68)
72 2ldi_A Zinc-transporting ATPas 98.8 1.5E-08 5.1E-13 80.8 7.8 67 45-111 2-68 (71)
73 2crl_A Copper chaperone for su 98.7 4.3E-08 1.5E-12 84.5 10.2 68 127-198 18-85 (98)
74 1fvq_A Copper-transporting ATP 98.7 2.1E-08 7.1E-13 80.5 7.5 66 47-113 3-68 (72)
75 1jww_A Potential copper-transp 98.7 1.6E-08 5.6E-13 83.0 6.8 69 45-113 2-70 (80)
76 2kt2_A Mercuric reductase; nme 98.7 2.4E-08 8.4E-13 79.4 7.4 64 49-113 3-66 (69)
77 2kkh_A Putative heavy metal tr 98.7 5.1E-08 1.7E-12 83.4 9.8 72 42-113 12-83 (95)
78 1yjr_A Copper-transporting ATP 98.7 2.2E-08 7.4E-13 81.1 7.1 66 47-112 5-70 (75)
79 1cc8_A Protein (metallochapero 98.7 4.7E-08 1.6E-12 79.0 8.9 65 45-113 4-69 (73)
80 2roe_A Heavy metal binding pro 98.6 2.9E-08 9.9E-13 78.4 5.2 61 49-112 3-63 (66)
81 2xmm_A SSR2857 protein, ATX1; 98.6 4.8E-08 1.6E-12 76.2 6.3 62 47-111 2-63 (64)
82 2k2p_A Uncharacterized protein 98.6 4.3E-08 1.5E-12 82.0 6.1 65 44-111 20-84 (85)
83 2kyz_A Heavy metal binding pro 98.6 3.3E-08 1.1E-12 78.4 5.1 61 47-112 2-62 (67)
84 2crl_A Copper chaperone for su 98.6 2.6E-07 9E-12 79.5 10.2 67 45-115 18-84 (98)
85 2aj0_A Probable cadmium-transp 98.5 1.1E-07 3.8E-12 76.2 5.1 60 129-195 4-63 (71)
86 2aj0_A Probable cadmium-transp 98.4 5.9E-07 2E-11 71.9 6.9 60 47-113 4-63 (71)
87 1qup_A Superoxide dismutase 1 98.3 1.2E-06 4.1E-11 87.0 9.0 68 128-199 6-73 (222)
88 1jk9_B CCS, copper chaperone f 98.2 2.3E-06 7.7E-11 86.3 8.3 68 128-199 7-74 (249)
89 3j09_A COPA, copper-exporting 98.2 3.4E-06 1.2E-10 99.1 10.1 67 47-113 3-69 (723)
90 1qup_A Superoxide dismutase 1 98.0 9.7E-06 3.3E-10 80.4 8.9 65 46-114 6-70 (222)
91 1jk9_B CCS, copper chaperone f 98.0 1.3E-05 4.4E-10 80.8 9.5 89 45-142 6-94 (249)
92 4fe3_A Cytosolic 5'-nucleotida 94.6 0.0055 1.9E-07 63.6 -0.2 40 628-668 16-64 (297)
93 4gwb_A Peptide methionine sulf 86.7 1.1 3.9E-05 41.3 6.4 49 140-188 9-72 (168)
94 2v50_A Multidrug resistance pr 84.2 48 0.0016 40.2 21.1 144 45-189 42-210 (1052)
95 1fvg_A Peptide methionine sulf 83.1 1.8 6.1E-05 41.1 6.0 49 140-188 50-117 (199)
96 2j89_A Methionine sulfoxide re 80.9 2.3 7.9E-05 41.7 6.0 49 140-188 101-168 (261)
97 3bqh_A PILB, peptide methionin 80.8 2.1 7.3E-05 40.4 5.6 49 140-188 9-76 (193)
98 1nwa_A Peptide methionine sulf 80.6 2.5 8.7E-05 40.1 6.1 49 140-188 32-95 (203)
99 1ff3_A Peptide methionine sulf 80.0 2.5 8.5E-05 40.5 5.8 49 140-188 49-116 (211)
100 4dx5_A Acriflavine resistance 78.5 1E+02 0.0035 37.3 21.3 142 45-189 42-210 (1057)
101 2z51_A NIFU-like protein 2, ch 74.5 19 0.00063 32.7 9.8 118 99-234 15-152 (154)
102 3e0m_A Peptide methionine sulf 73.7 4.7 0.00016 40.9 6.2 49 140-188 9-74 (313)
103 4gwb_A Peptide methionine sulf 69.4 6.4 0.00022 36.3 5.5 49 211-262 9-72 (168)
104 3ixz_A Potassium-transporting 66.9 68 0.0023 38.8 15.5 197 409-627 155-364 (1034)
105 3pim_A Peptide methionine sulf 65.2 4.3 0.00015 38.1 3.5 48 140-187 26-100 (187)
106 1fvg_A Peptide methionine sulf 61.0 10 0.00034 36.0 5.2 50 210-262 49-117 (199)
107 1jdq_A TM006 protein, hypothet 60.8 38 0.0013 28.1 8.3 69 130-208 27-95 (98)
108 1nwa_A Peptide methionine sulf 57.6 12 0.00041 35.4 5.1 50 210-262 31-95 (203)
109 3bqh_A PILB, peptide methionin 56.3 12 0.00042 35.2 4.9 49 210-261 8-75 (193)
110 2j89_A Methionine sulfoxide re 55.0 14 0.00048 36.2 5.2 51 209-262 99-168 (261)
111 3lvj_C Sulfurtransferase TUSA; 54.4 57 0.0019 25.9 8.1 68 130-208 11-78 (82)
112 1ff3_A Peptide methionine sulf 53.6 16 0.00053 35.0 5.2 51 210-263 48-117 (211)
113 3lvj_C Sulfurtransferase TUSA; 53.5 35 0.0012 27.2 6.6 56 47-112 10-65 (82)
114 4dx5_A Acriflavine resistance 52.2 58 0.002 39.5 11.5 119 143-262 62-209 (1057)
115 2v50_A Multidrug resistance pr 52.1 45 0.0015 40.5 10.4 120 143-262 62-209 (1052)
116 3ne5_A Cation efflux system pr 48.2 4.3E+02 0.015 31.7 27.1 144 45-191 53-222 (1054)
117 1jdq_A TM006 protein, hypothet 47.3 47 0.0016 27.5 6.6 56 48-113 27-82 (98)
118 3e0m_A Peptide methionine sulf 45.8 23 0.00078 36.0 5.2 50 210-262 8-74 (313)
119 2x3d_A SSO6206; unknown functi 45.0 53 0.0018 26.8 6.2 53 143-195 20-77 (96)
120 2raq_A Conserved protein MTH88 44.7 53 0.0018 26.9 6.2 68 127-195 6-78 (97)
121 3bpd_A Uncharacterized protein 43.6 22 0.00076 29.2 3.8 67 128-195 7-78 (100)
122 1je3_A EC005, hypothetical 8.6 42.7 71 0.0024 26.3 7.0 68 130-208 28-95 (97)
123 1je3_A EC005, hypothetical 8.6 41.2 42 0.0014 27.8 5.4 56 47-112 27-82 (97)
124 2l69_A Rossmann 2X3 fold prote 35.5 1.1E+02 0.0037 24.6 6.6 83 168-264 4-101 (134)
125 3ne5_A Cation efflux system pr 34.3 6.2E+02 0.021 30.3 16.7 130 60-189 595-757 (1054)
126 2jsx_A Protein NAPD; TAT, proo 33.7 1.6E+02 0.0055 24.0 7.8 33 203-236 43-75 (95)
127 3pim_A Peptide methionine sulf 33.3 22 0.00076 33.2 2.7 51 209-262 24-101 (187)
128 3rfu_A Copper efflux ATPase; a 30.6 39 0.0013 39.1 4.8 87 529-627 317-404 (736)
129 2jmz_A Hypothetical protein MJ 30.4 40 0.0014 31.5 4.1 27 450-476 112-138 (186)
130 1pav_A Hypothetical protein TA 30.4 51 0.0017 25.7 4.1 55 131-195 8-62 (78)
131 3ewi_A N-acylneuraminate cytid 27.4 23 0.00079 32.5 1.8 24 642-665 4-27 (168)
132 3hz7_A Uncharacterized protein 27.3 1E+02 0.0036 24.7 5.5 67 131-209 3-71 (87)
133 1pav_A Hypothetical protein TA 25.5 38 0.0013 26.5 2.4 54 49-112 8-61 (78)
134 2x3d_A SSO6206; unknown functi 25.4 1E+02 0.0035 25.2 4.9 52 61-112 20-76 (96)
135 2f40_A Hypothetical protein PF 24.8 68 0.0023 25.6 3.6 50 212-261 18-67 (96)
136 2raq_A Conserved protein MTH88 23.7 1.1E+02 0.0037 25.1 4.7 68 44-112 5-77 (97)
137 1xhj_A Nitrogen fixation prote 23.6 57 0.0019 26.4 3.1 53 99-161 18-78 (88)
138 1gtd_A MTH169; synthetase, FGA 23.5 2.8E+02 0.0095 22.0 7.4 68 167-236 6-78 (85)
139 3mn1_A Probable YRBI family ph 23.1 48 0.0016 30.8 3.1 26 639-664 11-36 (189)
140 3bpd_A Uncharacterized protein 23.0 73 0.0025 26.2 3.6 66 45-111 6-76 (100)
141 3hz7_A Uncharacterized protein 22.8 1E+02 0.0034 24.8 4.6 53 49-112 3-57 (87)
142 2lcj_A PAB POLC intein; hydrol 22.4 88 0.003 29.0 4.8 25 450-474 102-126 (185)
143 2lqj_A Mg2+ transport protein; 21.8 96 0.0033 25.4 4.3 58 181-238 26-88 (94)
144 3cq1_A Putative uncharacterize 20.6 61 0.0021 26.9 3.0 35 130-164 45-82 (103)
No 1
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=100.00 E-value=1.3e-83 Score=757.00 Aligned_cols=491 Identities=39% Similarity=0.593 Sum_probs=428.7
Q ss_pred eceeecccccchhhHHHHHhhhcCCCCeeeEEeeeccCeEEEEeCCCCCCHHHHHHHHHhcCCceeEeecCCcceeEEEE
Q 004259 129 VGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASFVQSSGQDKILLQV 208 (765)
Q Consensus 129 ~~~~~i~gm~C~~C~~~Ie~~l~~~~GV~~~~vn~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~~~~~~~~~~i 208 (765)
+..+.|+||+|++|+++||+.+++++||.++++|+.++++.|.|++...+.+++.++++++||++........
T Consensus 3 ~~~l~V~GM~Ca~Ca~~Ie~~L~~~~GV~~v~Vnl~~~~~~V~~d~~~~~~~~i~~ai~~~Gy~~~~~~~~~~------- 75 (723)
T 3j09_A 3 ERTVRVTGMTCAMCVKSIETAVGSLEGVEEVRVNLATETAFIRFDEKRIDFETIKRVIEDLGYGVVDEQAAVS------- 75 (723)
T ss_dssp CEEEEEETCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHCCEESSCCCCCC-------
T ss_pred eEEEEeCCCCchHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEeCCCcCCHHHHHHHHHhcCCcccccccccc-------
Confidence 4679999999999999999999999999999999999999999999888999999999999998743111000
Q ss_pred ecccchhhhHHHHhhhccCCCceEEEeecCCCeEEEEecCCCCChhhHHHhhhhcCCCcceeEecCccccccccchhhHH
Q 004259 209 TGVLCELDAHFLEGILSNFKGVRQFRFDKISGELEVLFDPEALSSRSLVDGIAGRSNGKFQIRVMNPFARMTSRDSEETS 288 (765)
Q Consensus 209 ~gm~c~~ca~~ie~~l~~~~GV~~v~vn~~~~~~~V~ydp~~i~~~~i~~~i~~~g~~~~~~~~~~~~~~~~~~~~~e~~ 288 (765)
. +. ++.+
T Consensus 76 -------------------------------~------~~------------------------------------~~~~ 82 (723)
T 3j09_A 76 -------------------------------A------EV------------------------------------EHLS 82 (723)
T ss_dssp -------------------------------C------CC------------------------------------CCCC
T ss_pred -------------------------------h------hh------------------------------------HHHH
Confidence 0 00 0001
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCchhhHHHHhhhccCCcchHHHHHHHHHHHHhhhcCHHHHHHHHHHHHcCCCChhHH
Q 004259 289 NMFRLFISSLFLSIPVFFIRVICPHIPLVYALLLWRCGPFLMGDWLNWALVSVVQFVIGKRFYTAAGRALRNGSTNMDVL 368 (765)
Q Consensus 289 ~~~~~~~~~lllai~v~i~~m~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~g~~~~~~a~~~l~~~~~~md~l 368 (765)
+++++++.++++++|++++++. .. ++...|++++|++|+++|+|+|||++||+++++|++|||+|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~-~~--------------~~~~~~~~~~l~~~~~~~~g~~~~~~a~~~l~~~~~~md~l 147 (723)
T 3j09_A 83 RMKRKLYVAAFAGVLLLFLAHF-IS--------------LPYEDFVQLLIALPAIFYSGSSIFKAAFSALRRRTLNMDVM 147 (723)
T ss_dssp CSCCCSSSTTTTHHHHHHHTTS-SC--------------SSSSCCSCCSTHHHHHHHHHHHHHHHTCCTTTTCSTTSCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-hc--------------cchHHHHHHHHHHHHHHHhHHHHHHHHHHHHHcCCCChHHH
Confidence 1122334455667776655431 11 11123667789999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCCcchhhhhHHHHHHHHHHHHHHHHHhchHHHHHHHHHhcCCCeEEEEEecCCCce
Q 004259 369 VALGTSAAYFYSVGALLYGVVTGFWSPTYFETSAMLITFVLFGKYLEILAKGKTSDAIKKLVELAPATALLVVKDKVGKC 448 (765)
Q Consensus 369 ~~l~~~~a~~~s~~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~le~~~~~k~~~~l~~l~~~~~~~~~v~~~~~~g~~ 448 (765)
+++|+++||+||+++++.... ....||++++++++++++|+++|.++++|+++.+++|.++.|++++++ |||
T Consensus 148 ~~l~~~~a~~~s~~~~~~~~~---~~~~~~~~~~~i~~~~~ig~~le~~~~~~~~~~i~~l~~l~~~~a~v~---r~g-- 219 (723)
T 3j09_A 148 YSMGVGAAFLASVLSTAGVLP---REYSFYETSVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVI---RDG-- 219 (723)
T ss_dssp CSCHHHHHHHHHHHHHHTTTT---CCCCCCTTHHHHHHHHHHHHHHHHHHHTTCCCTTHHHHHTSCSEEEEE---ETT--
T ss_pred HHHHHHHHHHHHHHHHHhhcc---cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeEEE---ECC--
Confidence 999999999999998875321 122389999999999999999999999999999999999999999999 788
Q ss_pred eeeEEeeccCcCCCCEEEEcCCCccCccEEEEeccceeeccccCCCcceeccCCCCceeeeeeeecceEEEEEEEeCCcc
Q 004259 449 IEEREIDALLIQSGDTLKVLPGTKLPADGIVVWGTSYVNESMVTGEAVPVLKEINSPVIGGTINLHGVLHIQATKVGSDA 528 (765)
Q Consensus 449 ~~~~~i~~~~l~~GDiv~v~~Ge~iP~Dg~vl~g~~~Vdes~LTGEs~pv~k~~g~~v~aGt~~~~g~~~~~v~~~g~~t 528 (765)
++++|++++|+|||+|+|++||+|||||+|++|++.||||+|||||.|+.|++||.||+||++.+|.++++|+++|.+|
T Consensus 220 -~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~G~~~VdeS~LTGES~pv~K~~g~~v~~Gt~~~~g~~~~~v~~~g~~T 298 (723)
T 3j09_A 220 -KEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGESYVDESMISGEPVPVLKSKGDEVFGATINNTGVLKIRATRVGGET 298 (723)
T ss_dssp -EEEEEEGGGCCTTCEEEECTTCBCCSEEEEEECCEEEECHHHHCCSSCEEECTTCEECTTCEECSSCEEEEEEECGGGS
T ss_pred -EEEEEEHHHCCCCCEEEECCCCEEeeEEEEEECCeEEecccccCCCcceeecCCCeeccceEEecCcEEEEEEEecCcc
Confidence 7899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCcchHHHHHHHHhheeeec
Q 004259 529 VLSQIISLVETAQMSKAPIQKFADFVASIFVPIVVTLALFTWLCWYVAGVLGAYPEQWLPENGTHFVFALMFSISVVVIA 608 (765)
Q Consensus 529 ~~~~i~~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vlv~~ 608 (765)
.+++|.+++++++.+|+|+|+++|+++.+|+|++++++++++++|++.. +.++..++.+++++++++
T Consensus 299 ~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~vl~~a~~~~~~~~~~~-------------~~~~~~~~~~~i~vlvia 365 (723)
T 3j09_A 299 LLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPTVLLVAISAFIYWYFIA-------------HAPLLFAFTTLIAVLVVA 365 (723)
T ss_dssp HHHHHHHHHSSSCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSST-------------TCTTCCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-------------CCcHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999999888775432 123445678899999999
Q ss_pred ccchhhhhHHHHHHHHHHHHhhcceEEecchHHhhhcCCcEEEecCCCccccCceEEEEEEecCCCCHHHHHHHHHHHHc
Q 004259 609 CPCALGLATPTAVMVATGVGANNGVLIKGGDALERAQKIKYVIFDKTGTLTQGRATVTTAKVFTKMDRGEFLTLVASAEA 688 (765)
Q Consensus 609 ~P~al~la~p~~~~~~~~~~~~~gilik~~~~le~lg~v~~i~fDKTGTLT~g~~~v~~~~~~~~~~~~~~l~~a~~~e~ 688 (765)
|||+|++++|+++..++++++|+|+++|+++++|.+|++|+||||||||||+|+|+|.++.+. +.++++++++++++|.
T Consensus 366 ~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~g~~~v~~~~~~-~~~~~~~l~~aa~~e~ 444 (723)
T 3j09_A 366 CPCAFGLATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPL-NGDERELLRLAAIAER 444 (723)
T ss_dssp SCTTHHHHHHHHHHHHHHHHHTTTCEESSTTHHHHGGGCCEEEEEHHHHTSCSCCEEEEEEES-SSCHHHHHHHHHHHHT
T ss_pred hhHHHHHHHHHHHHHHHHHHHHCCeEEeChHHHHHhhcCCEEEEcCCCccccCceEEEEEEeC-CCCHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999999999999999999987 4578899999999999
Q ss_pred cCCChHHHHHHHHHHhccCCCCCCCCCCCCCCCcCcCCCCcccCCCceeeecCCeeEEEEcCeEEEeecccccc
Q 004259 689 SSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVSFRFHRT 762 (765)
Q Consensus 689 ~s~hPia~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~Gv~~~~~g~~~~vG~~~~~~ 762 (765)
.|+||+++||++++++. +..+.+++++++++|+|+.+ +++.+|+++|++
T Consensus 445 ~s~hP~~~Ai~~~a~~~---------------------~~~~~~~~~~~~~~g~g~~~----~~~~~g~~~~~~ 493 (723)
T 3j09_A 445 RSEHPIAEAIVKKALEH---------------------GIELGEPEKVEVIAGEGVVA----DGILVGNKRLME 493 (723)
T ss_dssp TCCSHHHHHHHHHHHHT---------------------TCCCCSCCCCEEETTTEEEE----TTEEEECHHHHH
T ss_pred cCCCchhHHHHHHHHhc---------------------CCCcCCccceEEecCCceEE----EEEEECCHHHHH
Confidence 99999999999999876 22335667899999999998 789999998874
No 2
>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp}
Probab=100.00 E-value=8e-80 Score=719.28 Aligned_cols=434 Identities=38% Similarity=0.583 Sum_probs=393.7
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHhhcCchhhHHHHhhhccCCcchHHHHHHHHHHHHhhhcCHHHHHHHHHHHHcC
Q 004259 282 RDSEETSNMFRLFISSLFLSIPVFFIRVICPHIPLVYALLLWRCGPFLMGDWLNWALVSVVQFVIGKRFYTAAGRALRNG 361 (765)
Q Consensus 282 ~~~~e~~~~~~~~~~~lllai~v~i~~m~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~g~~~~~~a~~~l~~~ 361 (765)
...++.+.+++++++++++++|+++++|..++++. + ..+....|++++|++|++||+|||||++||++|++|
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-----~~~~~~~~~~~~l~~~v~~~~g~~f~~~a~~~l~~~ 144 (736)
T 3rfu_A 73 VVSPEYLDMRRRFWIALMLTIPVVILEMGGHGLKH---F-----ISGNGSSWIQLLLATPVVLWGGWPFFKRGWQSLKTG 144 (736)
T ss_dssp -CCHHHHHHHHHHHHHHHHHHHHHHHHHSCCCTTS---S-----CSTTHHHHHHHHHHHHHHHTTTHHHHHHHHHHHTTS
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh---h-----ccccHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhc
Confidence 34567788999999999999999988775332110 0 113456799999999999999999999999999999
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHhhhcC-------CCCcchhhhhHHHHHHHHHHHHHHHHHhchHHHHHHHHHhcCC
Q 004259 362 STNMDVLVALGTSAAYFYSVGALLYGVVTG-------FWSPTYFETSAMLITFVLFGKYLEILAKGKTSDAIKKLVELAP 434 (765)
Q Consensus 362 ~~~md~l~~l~~~~a~~~s~~~~~~~~~~~-------~~~~~~~~~~~~li~~~~~~~~le~~~~~k~~~~l~~l~~~~~ 434 (765)
.+|||+|+++|+++||+||+++++.+.+.+ .....||++++++++++++|+++|.++++|+++.+++|.++.|
T Consensus 145 ~~~md~Lv~l~~~~a~~~S~~~~~~~~~~~~~~~~~~~~~~~yfe~a~~ii~~~llg~~le~~a~~~~~~ai~~L~~l~p 224 (736)
T 3rfu_A 145 QLNMFTLIAMGIGVAWIYSMVAVLWPGVFPHAFRSQEGVVAVYFEAAAVITTLVLLGQVLELKAREQTGSAIRALLKLVP 224 (736)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHCGGGSCSSSSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCSSHHHHHTCCCC
T ss_pred CCChHHHHHHHHHHHHHHHHHHHhcccccccccccccCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 999999999999999999999988643322 1135799999999999999999999999999999999999999
Q ss_pred CeEEEEEecCCCceeeeEEeeccCcCCCCEEEEcCCCccCccEEEEeccceeeccccCCCcceeccCCCCceeeeeeeec
Q 004259 435 ATALLVVKDKVGKCIEEREIDALLIQSGDTLKVLPGTKLPADGIVVWGTSYVNESMVTGEAVPVLKEINSPVIGGTINLH 514 (765)
Q Consensus 435 ~~~~v~~~~~~g~~~~~~~i~~~~l~~GDiv~v~~Ge~iP~Dg~vl~g~~~Vdes~LTGEs~pv~k~~g~~v~aGt~~~~ 514 (765)
+++++++ +|| ++++|++++|+|||+|+|++||+|||||+|++|++.||||+|||||.|+.|++|+.|++||+|.+
T Consensus 225 ~~a~vv~--~dg---~~~~v~~~~l~~GDiv~v~~Ge~IPaDg~vl~G~~~VDES~LTGES~Pv~K~~gd~v~~Gt~~~~ 299 (736)
T 3rfu_A 225 ESAHRIK--EDG---SEEEVSLDNVAVGDLLRVRPGEKIPVDGEVQEGRSFVDESMVTGEPIPVAKEASAKVIGATINQT 299 (736)
T ss_dssp CEEEEEE--TTE---EEEEEETTTCCTTCEECCCSSEECCSCEEECSSCEEEECSSSTTCSSCEEECTTCEECTTCEEES
T ss_pred CEEEEEe--cCC---EEEEEEHhhCCCCCEEEECCCCcccccEEEEECceEeeecccCCccccEEeccCCcCCCceEecc
Confidence 9999883 377 78999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEEEEeCCcchHHHHHHHHHHhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCcchH
Q 004259 515 GVLHIQATKVGSDAVLSQIISLVETAQMSKAPIQKFADFVASIFVPIVVTLALFTWLCWYVAGVLGAYPEQWLPENGTHF 594 (765)
Q Consensus 515 g~~~~~v~~~g~~t~~~~i~~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (765)
|.++++|+++|.+|.+++|++++++++.+|+|+|+++|+++.+|+|+++++++++|++|++.+. ...|
T Consensus 300 G~~~~~v~~~G~~T~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~v~~vl~ia~~~~~~w~~~~~------------~~~~ 367 (736)
T 3rfu_A 300 GSFVMKALHVGSDTMLARIVQMVSDAQRSRAPIQRLADTVSGWFVPAVILVAVLSFIVWALLGP------------QPAL 367 (736)
T ss_dssp CCCCEEECCCSTTSHHHHHHHHHHHHHSSCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCS------------SSST
T ss_pred ceEEEEEEEechhhHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC------------CchH
Confidence 9999999999999999999999999999999999999999999999999999999999987642 1235
Q ss_pred HHHHHHHhheeeecccchhhhhHHHHHHHHHHHHhhcceEEecchHHhhhcCCcEEEecCCCccccCceEEEEEEecCCC
Q 004259 595 VFALMFSISVVVIACPCALGLATPTAVMVATGVGANNGVLIKGGDALERAQKIKYVIFDKTGTLTQGRATVTTAKVFTKM 674 (765)
Q Consensus 595 ~~~~~~~i~vlv~~~P~al~la~p~~~~~~~~~~~~~gilik~~~~le~lg~v~~i~fDKTGTLT~g~~~v~~~~~~~~~ 674 (765)
..++.+++++++++|||+|++++|++++.++++++|+|+++|+++++|.++++|+||||||||||+|+|+|.++. .++.
T Consensus 368 ~~~l~~ai~vlviacPcaL~la~p~a~~~~~~~~a~~gilvk~~~alE~l~~v~~i~fDKTGTLT~g~~~v~~i~-~~~~ 446 (736)
T 3rfu_A 368 SYGLIAAVSVLIIACPCALGLATPMSIMVGVGKGAQSGVLIKNAEALERMEKVNTLVVDKTGTLTEGHPKLTRIV-TDDF 446 (736)
T ss_dssp THHHHHHHHHHHHHCCSTHHHHHHHHHHHHHHHHHHTTEEESCHHHHHHHTSCCEEEECCBTTTBCSSCEEEEEE-ESSS
T ss_pred HHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHHhhcceeechHHHHHHhcCCCEEEEeCCCCCcCCceEEEEEE-ecCC
Confidence 678899999999999999999999999999999999999999999999999999999999999999999999998 6678
Q ss_pred CHHHHHHHHHHHHccCCChHHHHHHHHHHhccCCCCCCCCCCCCCCCcCcCCCCcccCCCceeeecCCeeEEEEcCeEEE
Q 004259 675 DRGEFLTLVASAEASSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVL 754 (765)
Q Consensus 675 ~~~~~l~~a~~~e~~s~hPia~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~Gv~~~~~g~~~~ 754 (765)
++++++++++++|+.|+||+++||++++++. +..+.++++|++.+|+|+.+.++|+++.
T Consensus 447 ~~~~~l~~aa~le~~s~hPla~Aiv~~a~~~---------------------~~~~~~~~~f~~~~g~gv~~~~~g~~~~ 505 (736)
T 3rfu_A 447 VEDNALALAAALEHQSEHPLANAIVHAAKEK---------------------GLSLGSVEAFEAPTGKGVVGQVDGHHVA 505 (736)
T ss_dssp CHHHHHHHHHHHHHSSCCHHHHHHHHHHHTT---------------------CCCCCCCSCCCCCTTTEEEECSSSSCEE
T ss_pred CHHHHHHHHHHHhhcCCChHHHHHHHHHHhc---------------------CCCccCcccccccCCceEEEEECCEEEE
Confidence 8899999999999999999999999999876 2334567889999999999999999999
Q ss_pred eecccccc
Q 004259 755 VSFRFHRT 762 (765)
Q Consensus 755 vG~~~~~~ 762 (765)
+||++||+
T Consensus 506 ~G~~~~~~ 513 (736)
T 3rfu_A 506 IGNARLMQ 513 (736)
T ss_dssp EESHHHHH
T ss_pred EcCHHHHH
Confidence 99999875
No 3
>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=100.00 E-value=2.8e-74 Score=668.49 Aligned_cols=411 Identities=41% Similarity=0.618 Sum_probs=368.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCchhhHHHHhhhccCCcchHHHHHHHHHHHHhhhcCHHHHHHHHHHHHcCCCChhHH
Q 004259 289 NMFRLFISSLFLSIPVFFIRVICPHIPLVYALLLWRCGPFLMGDWLNWALVSVVQFVIGKRFYTAAGRALRNGSTNMDVL 368 (765)
Q Consensus 289 ~~~~~~~~~lllai~v~i~~m~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~g~~~~~~a~~~l~~~~~~md~l 368 (765)
.++++++.++++++|+++++|. ++ ++...|++++|++|+++|+|+|||++||+++++|++|||+|
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~-~~--------------~~~~~~~~~~l~~~~~~~~g~~~~~~a~~~l~~~~~~md~L 69 (645)
T 3j08_A 5 RMKRKLYVAAFAGVLLLFLAHF-IS--------------LPYEDFVQLLIALPAIFYSGSSIFKAAFSALRRRTLNMDVM 69 (645)
T ss_dssp SSSSSSSSSSCSHHHHHHHTTT-CC--------------SCCCSSSCCCTHHHHHHHHHHHHHHHTCCTTTTCSGGGCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-hh--------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHH
Confidence 3445666788888998776552 11 11234677889999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCCcchhhhhHHHHHHHHHHHHHHHHHhchHHHHHHHHHhcCCCeEEEEEecCCCce
Q 004259 369 VALGTSAAYFYSVGALLYGVVTGFWSPTYFETSAMLITFVLFGKYLEILAKGKTSDAIKKLVELAPATALLVVKDKVGKC 448 (765)
Q Consensus 369 ~~l~~~~a~~~s~~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~le~~~~~k~~~~l~~l~~~~~~~~~v~~~~~~g~~ 448 (765)
+++|+++||+||+++++.... ....||++++++++++++|+++|.++++|+++.+++|.++.|++++++ |||
T Consensus 70 ~~l~~~~a~~~s~~~~~~~~~---~~~~~~~~~~~i~~~~~ig~~le~~~~~~~~~~l~~l~~l~~~~a~v~---r~g-- 141 (645)
T 3j08_A 70 YSMGVGAAFLASVLSTAGVLP---REYSFYETSVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVI---RDG-- 141 (645)
T ss_dssp CSCHHHHHHHHHHHHHHHHCC---SCSSCCCSHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHTSCSEEEEE---ETT--
T ss_pred HHHHHHHHHHHHHHHHHhhcc---cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEE---ECC--
Confidence 999999999999998876421 122489999999999999999999999999999999999999999999 788
Q ss_pred eeeEEeeccCcCCCCEEEEcCCCccCccEEEEeccceeeccccCCCcceeccCCCCceeeeeeeecceEEEEEEEeCCcc
Q 004259 449 IEEREIDALLIQSGDTLKVLPGTKLPADGIVVWGTSYVNESMVTGEAVPVLKEINSPVIGGTINLHGVLHIQATKVGSDA 528 (765)
Q Consensus 449 ~~~~~i~~~~l~~GDiv~v~~Ge~iP~Dg~vl~g~~~Vdes~LTGEs~pv~k~~g~~v~aGt~~~~g~~~~~v~~~g~~t 528 (765)
++++|++++|+|||+|+|++||+|||||+|++|++.||||+|||||.|+.|++||.||+||++.+|.++++|+++|.+|
T Consensus 142 -~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~G~~~VdeS~LTGES~Pv~K~~g~~v~~Gt~~~~g~~~~~v~~~G~~T 220 (645)
T 3j08_A 142 -KEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGESYVDESMISGEPVPVLKSKGDEVFGATINNTGVLKIRATRVGGET 220 (645)
T ss_dssp -EEEEEEGGGCCTTCEEEECTTCBCCSEEEEEECCEEEECHHHHCCSSCEEECTTCEECTTCEECSSCEEEEEEECGGGS
T ss_pred -EEEEEEHHHCCCCCEEEECCCCEEeeEEEEEECcEEEEcccccCCCCceecCCCCEeeccEEEecCcEEEEEEEcCCcc
Confidence 7899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCcchHHHHHHHHhheeeec
Q 004259 529 VLSQIISLVETAQMSKAPIQKFADFVASIFVPIVVTLALFTWLCWYVAGVLGAYPEQWLPENGTHFVFALMFSISVVVIA 608 (765)
Q Consensus 529 ~~~~i~~~~~~~~~~k~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vlv~~ 608 (765)
.++++.+++++++.+|+|+|+.+|+++.+|+|++++++++++++|++.. +.++..++.+++++++++
T Consensus 221 ~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~vl~~a~~~~~~~~~~~-------------~~~~~~~~~~~i~vlvia 287 (645)
T 3j08_A 221 LLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPTVLLVAISAFIYWYFIA-------------HAPLLFAFTTLIAVLVVA 287 (645)
T ss_dssp HHHHHHHHHSCCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCC-------------SCSCCCTTTTTHHHHHHH
T ss_pred HHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-------------CCcHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999988775431 112334567889999999
Q ss_pred ccchhhhhHHHHHHHHHHHHhhcceEEecchHHhhhcCCcEEEecCCCccccCceEEEEEEecCCCCHHHHHHHHHHHHc
Q 004259 609 CPCALGLATPTAVMVATGVGANNGVLIKGGDALERAQKIKYVIFDKTGTLTQGRATVTTAKVFTKMDRGEFLTLVASAEA 688 (765)
Q Consensus 609 ~P~al~la~p~~~~~~~~~~~~~gilik~~~~le~lg~v~~i~fDKTGTLT~g~~~v~~~~~~~~~~~~~~l~~a~~~e~ 688 (765)
|||+|++++|+++..++++++|+|+++|+++++|.+|++|++|||||||||+|+|+|.++.+. +.++++++++++++|.
T Consensus 288 ~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~~~~~-~~~~~~~l~~aa~~e~ 366 (645)
T 3j08_A 288 CPCAFGLATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPL-NGDERELLRLAAIAER 366 (645)
T ss_dssp SCTTHHHHHHHHHHHHHHHHHTTCCCCSSTTHHHHGGGCCEEEEEGGGTSSSSCCEEEEEEES-SSCHHHHHHHHHHHHT
T ss_pred hhhHHHHHHHHHHHHHHHHHHHCCeEecCchHHHHhhCCCEEEEcCcccccCCCeEEEEEEeC-CCCHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999999999999999999999987 4578899999999999
Q ss_pred cCCChHHHHHHHHHHhccCCCCCCCCCCCCCCCcCcCCCCcccCCCceeeecCCeeEEEEcCeEEEeecccccc
Q 004259 689 SSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVSFRFHRT 762 (765)
Q Consensus 689 ~s~hPia~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~Gv~~~~~g~~~~vG~~~~~~ 762 (765)
.|+||+++||++++++. +....+.+++++++|+|+.+ +++.+|+++|++
T Consensus 367 ~s~hPla~Aiv~~a~~~---------------------g~~~~~~~~~~~~~g~g~~~----~~v~~g~~~~~~ 415 (645)
T 3j08_A 367 RSEHPIAEAIVKKALEH---------------------GIELGEPEKVEVIAGEGVVA----DGILVGNKRLME 415 (645)
T ss_dssp TCCSHHHHHHHHHHHHT---------------------TCCCCSCCCCEEETTTEEEE----TTEEEECHHHHH
T ss_pred cCCChhHHHHHHHHHhc---------------------CCCcCCccceEEecCCceEE----EEEEECCHHHHH
Confidence 99999999999999876 22335667899999999998 789999998874
No 4
>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1
Probab=100.00 E-value=2.6e-51 Score=487.27 Aligned_cols=329 Identities=19% Similarity=0.306 Sum_probs=275.6
Q ss_pred chhhhhHHHHHHHHHHHHHHHHHhchHHHHHHHHHhcCCCeEEEEEecCCCceeeeEEeeccCcCCCCEEEEcCCCccCc
Q 004259 396 TYFETSAMLITFVLFGKYLEILAKGKTSDAIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQSGDTLKVLPGTKLPA 475 (765)
Q Consensus 396 ~~~~~~~~li~~~~~~~~le~~~~~k~~~~l~~l~~~~~~~~~v~~~~~~g~~~~~~~i~~~~l~~GDiv~v~~Ge~iP~ 475 (765)
.|++. ++++++++++..++.++++|+.+++++|.++.|.+++|+ ||| ++++|++++|+|||+|.|++||+|||
T Consensus 140 ~~~~~-~~i~~vv~i~~~i~~~qe~~a~~a~~~L~~l~~~~a~V~---RdG---~~~~I~~~eLv~GDiV~l~~Gd~VPa 212 (920)
T 1mhs_A 140 DWVDF-GVICGLLLLNAVVGFVQEFQAGSIVDELKKTLALKAVVL---RDG---TLKEIEAPEVVPGDILQVEEGTIIPA 212 (920)
T ss_dssp CSSHH-HHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCSSCEEE---CSS---SEEECCTTTSCTTSEEEECTTCBCSS
T ss_pred hHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEE---ECC---EEEEEEHHHcCCCCEEEeCCCCcccc
Confidence 35543 456667788889999999999999999999999999999 888 78999999999999999999999999
Q ss_pred cEEEEeccc--eeeccccCCCcceeccCCCCceeeeeeeecceEEEEEEEeCCcchHHHHHHHHHHhccCCChhHHHHHH
Q 004259 476 DGIVVWGTS--YVNESMVTGEAVPVLKEINSPVIGGTINLHGVLHIQATKVGSDAVLSQIISLVETAQMSKAPIQKFADF 553 (765)
Q Consensus 476 Dg~vl~g~~--~Vdes~LTGEs~pv~k~~g~~v~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~~~~~~~~k~~~~~~~~~ 553 (765)
||+|++|++ .||||+|||||.|+.|.+||.+|+||.+.+|.++++|+++|.+|.+|+|.+++++++.+++|+++.+++
T Consensus 213 Dg~ll~g~~~l~VDES~LTGES~PV~K~~gd~v~sGT~v~~G~~~~~V~~tG~~T~~g~I~~lv~~a~~~~~~l~~~~~~ 292 (920)
T 1mhs_A 213 DGRIVTDDAFLQVDQSALTGESLAVDKHKGDQVFASSAVKRGEAFVVITATGDNTFVGRAAALVNAASGGSGHFTEVLNG 292 (920)
T ss_dssp EEEEEEESSCCEEBCTTTSSCCCCEECCSSCEECSCBCCSCCCEEEEEEECSTTCSTTTTTSSCCCCCCCCCHHHHHHHH
T ss_pred ceEEEecCceeeeeccccCCCCcceEecCCCeeecCceEecceEEEEEEEeCCcCHHHHHHHHHhhcccCCchHHHHHHH
Confidence 999999986 799999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCcchHHHHHHHHhheeeecccchhhhhHHHHHHHHHHHHhhcce
Q 004259 554 VASIFVPIVVTLALFTWLCWYVAGVLGAYPEQWLPENGTHFVFALMFSISVVVIACPCALGLATPTAVMVATGVGANNGV 633 (765)
Q Consensus 554 ~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vlv~~~P~al~la~p~~~~~~~~~~~~~gi 633 (765)
+..+++++++++++++++.|++. ..++..++.+++++++++|||+|++++|++++.+..+++|+|+
T Consensus 293 i~~~l~~~~~~~~~i~~~~~~~~--------------~~~~~~~l~~av~llV~aiP~aLp~~vti~la~g~~~mak~~i 358 (920)
T 1mhs_A 293 IGTILLILVIFTLLIVWVSSFYR--------------SNPIVQILEFTLAITIIGVPVGLPAVVTTTMAVGAAYLAKKKA 358 (920)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTTT--------------TCCHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc--------------CCcHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHhCCe
Confidence 99999988877776555433211 2357888999999999999999999999999999999999999
Q ss_pred EEecchHHhhhcCCcEEEecCCCccccCceEEEEEEecCCCCHHHHHHHHH-HHHccCC--ChHHHHHHHHHHhccCCCC
Q 004259 634 LIKGGDALERAQKIKYVIFDKTGTLTQGRATVTTAKVFTKMDRGEFLTLVA-SAEASSE--HPLAKAVVEYARHFHFFDD 710 (765)
Q Consensus 634 lik~~~~le~lg~v~~i~fDKTGTLT~g~~~v~~~~~~~~~~~~~~l~~a~-~~e~~s~--hPia~Ai~~~~~~~~~~~~ 710 (765)
++|+++++|.||++++||||||||||+|+|+|.+++..++.++++++..++ +.+..++ ||+++|+++++++...
T Consensus 359 lvk~~~aiE~Lg~v~vIc~DKTGTLT~n~m~v~~~~~~~g~~~~~ll~~a~l~~~~~~~~~~P~e~Al~~~~~~~~~--- 435 (920)
T 1mhs_A 359 IVQKLSAIESLAGVEILCSDKTGTLTKNKLSLHDPYTVAGVDPEDLMLTACLAASRKKKGIDAIDKAFLKSLKYYPR--- 435 (920)
T ss_dssp CCCCTTTHHHHHTCCEEEEETBTTTBSSCSCCCCCBCCSCCCCTHHHHHHHHSCCCSSCSCCSHHHHHHHHHHHSSS---
T ss_pred EEecCchhhhhccCcEEEECCCCCccccceeEEEEeecCCCCHHHHHHHHHHhcCCcccCCChHHHHHHHHHHhccc---
Confidence 999999999999999999999999999999999998777666666654433 2244566 9999999999876410
Q ss_pred CCCCCCCCCCCcCcCCCCcccCCCceee--ecCCeeEEEE---cCeEEE--eeccccc
Q 004259 711 PSLNPDGQSHSKESTGSGWLLDVSDFSA--LPGRGIQCFI---SGKQVL--VSFRFHR 761 (765)
Q Consensus 711 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~G~Gv~~~~---~g~~~~--vG~~~~~ 761 (765)
.+ . .....+..+... ..++|+++.+ +|+.+. .|+++++
T Consensus 436 ---~~------~----~~~~~~~~~~~pF~s~~k~ms~iv~~~~g~~~~~~KGape~i 480 (920)
T 1mhs_A 436 ---AK------S----VLSKYKVLQFHPFDPVSKKVVAVVESPQGERITCVKGAPLFV 480 (920)
T ss_dssp ---CC------G----GGSCCCEEEEEEEETTTTEEEEEECCSSSSCEEEEEECHHHH
T ss_pred ---ch------h----hccccceeEEeeccCCCCeEEEEEEeCCCcEEEEEeCCHHHH
Confidence 00 0 000012222222 2589999998 465544 5998875
No 5
>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A
Probab=100.00 E-value=5.8e-46 Score=452.42 Aligned_cols=252 Identities=23% Similarity=0.321 Sum_probs=233.6
Q ss_pred hhHHHHHHHHHHHHHHHHHhchHHHHHHHHHhcCCCeEEEEEecCCCceeeeEEeeccCcCCCCEEEEcCCCccCccEEE
Q 004259 400 TSAMLITFVLFGKYLEILAKGKTSDAIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQSGDTLKVLPGTKLPADGIV 479 (765)
Q Consensus 400 ~~~~li~~~~~~~~le~~~~~k~~~~l~~l~~~~~~~~~v~~~~~~g~~~~~~~i~~~~l~~GDiv~v~~Ge~iP~Dg~v 479 (765)
.++++++++++...++.++++|+.+.+++|.++.|.+++|+ ||| ++++|++++|+|||+|.|++||+|||||+|
T Consensus 137 ~~~~i~~vv~i~~~~~~~qe~ka~~~~~~L~~l~~~~a~V~---Rdg---~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~l 210 (1028)
T 2zxe_A 137 LGVVLSTVVIVTGCFSYYQEAKSSRIMDSFKNMVPQQALVI---RDG---EKSTINAEFVVAGDLVEVKGGDRIPADLRI 210 (1028)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCCCCHHHHHHTTSCSEEEEE---ETT---EEEEEEGGGCCTTCEEEEETTCBCCSEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEE---ECC---EEEEEEHHHCCcCCEEEECCCCEeeceEEE
Confidence 45566677778888999999999999999999999999999 788 789999999999999999999999999999
Q ss_pred Eecc-ceeeccccCCCcceeccCCCC----------ceeeeeeeecceEEEEEEEeCCcchHHHHHHHHHHhccCCChhH
Q 004259 480 VWGT-SYVNESMVTGEAVPVLKEINS----------PVIGGTINLHGVLHIQATKVGSDAVLSQIISLVETAQMSKAPIQ 548 (765)
Q Consensus 480 l~g~-~~Vdes~LTGEs~pv~k~~g~----------~v~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~~~~~~~~k~~~~ 548 (765)
++|+ +.||||+|||||.|+.|.+++ .+|+||.+.+|.++++|++||.+|.+|+|.+++++++.+++|+|
T Consensus 211 l~g~~~~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~t~lq 290 (1028)
T 2zxe_A 211 ISAHGCKVDNSSLTGESEPQTRSPEFSSENPLETRNIAFFSTNCVEGTARGVVVYTGDRTVMGRIATLASGLEVGRTPIA 290 (1028)
T ss_dssp EEEEEEEEECHHHHSCCSCEECCSSCCCSSTTTCSSEECTTCEEEEEEEEEEEEECGGGSHHHHHHHHHHHSCCCCCHHH
T ss_pred EeeCcEEEEcCccCCCCcceecccCCCCCCcccccceEEeCceEEcceEEEEEEEeccccHHHHHHHhccCCCCCCCcHH
Confidence 9996 589999999999999999886 49999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCcchHHHHHHHHhheeeecccchhhhhHHHHHHHHHHHH
Q 004259 549 KFADFVASIFVPIVVTLALFTWLCWYVAGVLGAYPEQWLPENGTHFVFALMFSISVVVIACPCALGLATPTAVMVATGVG 628 (765)
Q Consensus 549 ~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vlv~~~P~al~la~p~~~~~~~~~~ 628 (765)
+.+++++.+++++++++++++++++++.+ .+|..++.+++++++++|||+|++++|+++..+..++
T Consensus 291 ~~~~~~~~~l~~~~l~~~~~~~~~~~~~~--------------~~~~~~~~~~i~llv~~iP~~Lp~~vti~l~~~~~~m 356 (1028)
T 2zxe_A 291 IEIEHFIHIITGVAVFLGVSFFILSLILG--------------YSWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRM 356 (1028)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTT--------------CCHHHHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcc--------------CcHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHH
Confidence 99999999999999988888887755432 2477788899999999999999999999999999999
Q ss_pred hhcceEEecchHHhhhcCCcEEEecCCCccccCceEEEEEEec
Q 004259 629 ANNGVLIKGGDALERAQKIKYVIFDKTGTLTQGRATVTTAKVF 671 (765)
Q Consensus 629 ~~~gilik~~~~le~lg~v~~i~fDKTGTLT~g~~~v~~~~~~ 671 (765)
+|+|+++|+++++|+||++++||||||||||+|+|+|.+++..
T Consensus 357 ak~~ilvk~~~avE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~ 399 (1028)
T 2zxe_A 357 ARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFD 399 (1028)
T ss_dssp HTTTEEESSTTHHHHHHHCCEEEECCCCCCBCSSCEEEEEEET
T ss_pred hhCCceeccchHhhhhcCceEEeccCCCCCCCCeEEEEEEEEC
Confidence 9999999999999999999999999999999999999998764
No 6
>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana}
Probab=100.00 E-value=1.6e-49 Score=472.46 Aligned_cols=286 Identities=17% Similarity=0.281 Sum_probs=248.4
Q ss_pred chhhhhHHHHHHHHHHHHHHHHHhchHHHHHHHHHhcCCCeEEEEEecCCCceeeeEEeeccCcCCCCEEEEcCCCccCc
Q 004259 396 TYFETSAMLITFVLFGKYLEILAKGKTSDAIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQSGDTLKVLPGTKLPA 475 (765)
Q Consensus 396 ~~~~~~~~li~~~~~~~~le~~~~~k~~~~l~~l~~~~~~~~~v~~~~~~g~~~~~~~i~~~~l~~GDiv~v~~Ge~iP~ 475 (765)
.|++. ++++++++++.+++.++++|+++++++|.++.|.+++|+ ||| ++++|++++|+|||+|.|++||+|||
T Consensus 92 ~~~~~-~~I~~~v~i~~~l~~~qe~ka~~al~~L~~~~~~~a~V~---RdG---~~~~I~~~~Lv~GDiV~l~~Gd~IPa 164 (885)
T 3b8c_A 92 DWQDF-VGIICLLVINSTISFIEENNAGNAAAALMAGLAPKTKVL---RDG---KWSEQEAAILVPGDIVSIKLGDIIPA 164 (885)
T ss_dssp CCTTH-HHHHHHTTTTTTTTTTTTTTTTTHHHHTTTSCSCCCCCC---CSS---CSCCCCTTTTCTTSBCCCCSSCCCSS
T ss_pred cHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEE---ECC---EEEEEEHHHCCCCCEEEECCCCEEee
Confidence 46654 466677788999999999999999999999999999998 888 67899999999999999999999999
Q ss_pred cEEEEeccc-eeeccccCCCcceeccCCCCceeeeeeeecceEEEEEEEeCCcchHHHHHHHHHHhccCCChhHHHHHHH
Q 004259 476 DGIVVWGTS-YVNESMVTGEAVPVLKEINSPVIGGTINLHGVLHIQATKVGSDAVLSQIISLVETAQMSKAPIQKFADFV 554 (765)
Q Consensus 476 Dg~vl~g~~-~Vdes~LTGEs~pv~k~~g~~v~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~~~~~~~~k~~~~~~~~~~ 554 (765)
||+|++|++ .||||+|||||.|+.|.+||.+|+||.+.+|.++++|+++|.+|.+|++.+++++ +.+++|+|+.++++
T Consensus 165 Dg~ll~g~~l~VdES~LTGES~Pv~K~~g~~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~-~~~~~~lq~~~~~i 243 (885)
T 3b8c_A 165 DARLLEGDPLKVDQSALTGESLPVTKHPGQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDS-TNQVGHFQKVLTAI 243 (885)
T ss_dssp CCCCCCSSCBCCCCCSTTCCSSCCCBSSCCCCCSCCCCCSCCCCCBCCSCTTTTTSTTCCCSCCS-CSCCSTTTTTTHHH
T ss_pred ceEEEEcCcccccccccCCCCcceEecCCCccccCeEEeeeEEEEEEEEcCcccHHHHHHHHHhc-ccccChHHHHHHHH
Confidence 999999997 6999999999999999999999999999999999999999999999999998877 67899999999999
Q ss_pred HHHHHHHHH-HHHHHHHHHHHHHhhcCCCCCcccCCCcchHHHHHHHHhheeeecccchhhhhHHHHHHHHHHHHhhcce
Q 004259 555 ASIFVPIVV-TLALFTWLCWYVAGVLGAYPEQWLPENGTHFVFALMFSISVVVIACPCALGLATPTAVMVATGVGANNGV 633 (765)
Q Consensus 555 ~~~~~~~~l-~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vlv~~~P~al~la~p~~~~~~~~~~~~~gi 633 (765)
+.++++.++ ++++++++.|++. ..+|..++.+++++++++|||+|++++++++..+..+++|+|+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~v~llv~aiP~aLp~~vti~la~g~~r~ak~~i 309 (885)
T 3b8c_A 244 GNFCICSIAIGMVIEIIVMYPIQ--------------RRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGA 309 (885)
T ss_dssp HHHHHHHHHHHHHHHSTTTTTTT--------------CSCSTTHHHHHHHHTTTTCCSSTTTHHHHTTTHHHHHHTTTSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHc--------------cCcHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhCCe
Confidence 988655333 2333333322211 1234457888999999999999999999999999999999999
Q ss_pred EEecchHHhhhcCCcEEEecCCCccccCceEEEEEE--ec-CCCCHHHHHHHHHHHHcc-CCChHHHHHHHHHH
Q 004259 634 LIKGGDALERAQKIKYVIFDKTGTLTQGRATVTTAK--VF-TKMDRGEFLTLVASAEAS-SEHPLAKAVVEYAR 703 (765)
Q Consensus 634 lik~~~~le~lg~v~~i~fDKTGTLT~g~~~v~~~~--~~-~~~~~~~~l~~a~~~e~~-s~hPia~Ai~~~~~ 703 (765)
++|+++++|+||++|+||||||||||+|+|+|.+.. .. ++.++++++.+++.++.. +.||+++||++++.
T Consensus 310 lvk~~~aiE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~ll~~aa~~~~~~~~~p~~~Al~~~~~ 383 (885)
T 3b8c_A 310 ITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFCKGVEKDQVLLFAAMASRVENQDAIDAAMVGMLA 383 (885)
T ss_dssp CCSSGGGHHHHTTCCCCEEECCCCCSCCCCCCCSCCCCSSCSSTTHHHHHHHHHHHCCSSSCCSHHHHHHHTTC
T ss_pred EeCCchHHHHHhCCCEEEECCCCCcccCceEEEEEEEeccCCCCCHHHHHHHHHHHhCCCCCCchHHHHHHHhh
Confidence 999999999999999999999999999999997432 22 345778899998888874 89999999999875
No 7
>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ...
Probab=100.00 E-value=1.9e-44 Score=439.35 Aligned_cols=265 Identities=20% Similarity=0.293 Sum_probs=227.1
Q ss_pred chhhhhHHHHHHHHHHHHHHHHHhchHHHHHHHHHhcCCCeEEEEEecCCCceee-eEEeeccCcCCCCEEEEcCCCccC
Q 004259 396 TYFETSAMLITFVLFGKYLEILAKGKTSDAIKKLVELAPATALLVVKDKVGKCIE-EREIDALLIQSGDTLKVLPGTKLP 474 (765)
Q Consensus 396 ~~~~~~~~li~~~~~~~~le~~~~~k~~~~l~~l~~~~~~~~~v~~~~~~g~~~~-~~~i~~~~l~~GDiv~v~~Ge~iP 474 (765)
.|+++. +++++++++..+..++++|+++++++|.++.|.+++|+ |||+ + +++|++++|+|||+|.|++||+||
T Consensus 88 ~~~~~~-~i~~~~~~~~~i~~~qe~~a~~al~~L~~~~~~~a~V~---R~g~--~~~~~I~~~~lv~GDiV~l~~Gd~IP 161 (995)
T 3ar4_A 88 AFVEPF-VILLILIANAIVGVWQERNAENAIEALKEYEPEMGKVY---RADR--KSVQRIKARDIVPGDIVEVAVGDKVP 161 (995)
T ss_dssp SSHHHH-HHHHHHHHHHHHHHHHHHHCCCHHHHHGGGSCSEEEEE---BTTC--SSCEEEEGGGCCTTCEEEEETTCBCC
T ss_pred hHHHhH-HhhHHHHHHHHHHHHHHHHHHHHHHHHHccCCCeEEEE---eCCC--ceEEEEEHHHCCCCCEEEECCCCccc
Confidence 566654 44455567777888888888899999999999999999 7762 2 589999999999999999999999
Q ss_pred ccEEEEecc---ceeeccccCCCcceeccCCC-------------CceeeeeeeecceEEEEEEEeCCcchHHHHHHHHH
Q 004259 475 ADGIVVWGT---SYVNESMVTGEAVPVLKEIN-------------SPVIGGTINLHGVLHIQATKVGSDAVLSQIISLVE 538 (765)
Q Consensus 475 ~Dg~vl~g~---~~Vdes~LTGEs~pv~k~~g-------------~~v~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~~~ 538 (765)
|||+|++|+ +.||||+|||||.|+.|.++ +.+|+||.+.+|.++++|++||.+|.+|+|.++++
T Consensus 162 aD~~ll~~~s~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~~~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~~~~ 241 (995)
T 3ar4_A 162 ADIRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQMA 241 (995)
T ss_dssp SEEEEEEECSSCEEEECHHHHCCCSCEEECCSCCCCTTCCGGGCTTEECTTCEEEECEEEEEEEECGGGSHHHHHHHHHH
T ss_pred ccEEEEEEeeceEEEEcccccCCCcceeccccccCCcccCcccccceEecCCEEEcceEEEEEEEcCcchHHHHHHHHhh
Confidence 999998754 47999999999999999887 68999999999999999999999999999999999
Q ss_pred HhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC-CCcccCCCcchHHHHHHHHhheeeecccchhhhhH
Q 004259 539 TAQMSKAPIQKFADFVASIFVPIVVTLALFTWLCWYVAGVLGAY-PEQWLPENGTHFVFALMFSISVVVIACPCALGLAT 617 (765)
Q Consensus 539 ~~~~~k~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~vlv~~~P~al~la~ 617 (765)
+++.+++|+|+.+|+++.++++++++++++++++|+.... ... ...|+ ..+...+..++++++++|||+|++++
T Consensus 242 ~~~~~~tplq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~----~~~~~~~~~ai~l~v~aiP~~Lp~~v 316 (995)
T 3ar4_A 242 ATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFN-DPVHGGSWI----RGAIYYFKIAVALAVAAIPEGLPAVI 316 (995)
T ss_dssp TCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGGG-SCSSSSCHH----HHHHHHHHHHHHHHHHHSCTTHHHHH
T ss_pred cCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cccccchHH----HHHHHHHHHHHHHHHHhcCcchHHHH
Confidence 9999999999999999999999988888776655432110 000 00011 12334567889999999999999999
Q ss_pred HHHHHHHHHHHhhcceEEecchHHhhhcCCcEEEecCCCccccCceEEEEEEec
Q 004259 618 PTAVMVATGVGANNGVLIKGGDALERAQKIKYVIFDKTGTLTQGRATVTTAKVF 671 (765)
Q Consensus 618 p~~~~~~~~~~~~~gilik~~~~le~lg~v~~i~fDKTGTLT~g~~~v~~~~~~ 671 (765)
|++++.+..+++++|+++|+++++|+||++++||||||||||+|+|+|.+++..
T Consensus 317 t~~la~~~~~ma~~~~lvr~~~~iE~Lg~v~~ic~DKTGTLT~n~m~v~~~~~~ 370 (995)
T 3ar4_A 317 TTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCKMFII 370 (995)
T ss_dssp HHHHHHHHHHHHHTTEEESCTTHHHHHHTCCEEEEESTTTTBCCCCEEEEEEEE
T ss_pred HHHHHHHHHHhccCCcEeccchhhhhhcCceEEEecCCCCcccCceEEEEEEec
Confidence 999999999999999999999999999999999999999999999999998753
No 8
>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A
Probab=100.00 E-value=1.2e-43 Score=432.94 Aligned_cols=255 Identities=22% Similarity=0.298 Sum_probs=235.3
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHhchHHHHHHHHHhcCCCeEEEEEecCCCceeeeEEeeccCcCCCCEEEEcCCCccCcc
Q 004259 397 YFETSAMLITFVLFGKYLEILAKGKTSDAIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQSGDTLKVLPGTKLPAD 476 (765)
Q Consensus 397 ~~~~~~~li~~~~~~~~le~~~~~k~~~~l~~l~~~~~~~~~v~~~~~~g~~~~~~~i~~~~l~~GDiv~v~~Ge~iP~D 476 (765)
++..+++++++++++..+..++++|+.+++++|.++.|.+++|+ ||| ++++|++++|+|||+|.|++||+||||
T Consensus 139 ~~~~~~~i~~vv~i~~~~~~~qe~ka~~al~~L~~l~~~~a~Vi---RdG---~~~~I~~~eLv~GDiV~l~~Gd~VPAD 212 (1034)
T 3ixz_A 139 NLYLALALIAVVVVTGCFGYYQEFKSTNIIASFKNLVPQQATVI---RDG---DKFQINADQLVVGDLVEMKGGDRVPAD 212 (1034)
T ss_pred chhhhhhhheeeeHHHHHHHHHHHHHHHHHHHHhccCCCeeEEE---ECC---EEEEEEHHHCCCCcEEEEcCCceecCC
Confidence 33345666777788888999999999999999999999999999 888 789999999999999999999999999
Q ss_pred EEEEeccc-eeeccccCCCcceeccCCC----------CceeeeeeeecceEEEEEEEeCCcchHHHHHHHHHHhccCCC
Q 004259 477 GIVVWGTS-YVNESMVTGEAVPVLKEIN----------SPVIGGTINLHGVLHIQATKVGSDAVLSQIISLVETAQMSKA 545 (765)
Q Consensus 477 g~vl~g~~-~Vdes~LTGEs~pv~k~~g----------~~v~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~~~~~~~~k~ 545 (765)
|+|++|.. .||||+|||||.|+.|.++ +.+|+||.+.+|.++++|++||.+|.+|+|.+++++.+..++
T Consensus 213 ~~ll~~~~l~VdES~LTGES~pv~K~~~~~~~~~~~~~n~~f~GT~v~~G~~~~vVv~tG~~T~~GkI~~~~~~~~~~~t 292 (1034)
T 3ixz_A 213 IRILQAQGRKVDNSSLTGESEPQTRSPECTHESPLETRNIAFFSTMCLEGTAQGLVVNTGDRTIIGRIASLASGVENEKT 292 (1034)
T ss_pred eEEEEeCCceEEecccCCCCCCeeccCCCccccccccccceecceeEEeecceEEEEeehhhhHhhHHHHhhcccccCCC
Confidence 99999885 6999999999999999765 558999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCcchHHHHHHHHhheeeecccchhhhhHHHHHHHHH
Q 004259 546 PIQKFADFVASIFVPIVVTLALFTWLCWYVAGVLGAYPEQWLPENGTHFVFALMFSISVVVIACPCALGLATPTAVMVAT 625 (765)
Q Consensus 546 ~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vlv~~~P~al~la~p~~~~~~~ 625 (765)
|+++.++++..++.+++++++++.+++|++.+ .+|..++.+++++++++|||+|+++++++++.+.
T Consensus 293 pl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~i~l~v~~iPe~Lp~~vti~la~~~ 358 (1034)
T 3ixz_A 293 PIAIEIEHFVDIIAGLAILFGATFFIVAMCIG--------------YTFLRAMVFFMAIVVAYVPEGLLATVTVCLSLTA 358 (1034)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--------------chHHHHHHHHHHHHHheeccccHHHHHHHHHHHH
Confidence 99999999999999998888888887776543 3678889999999999999999999999999999
Q ss_pred HHHhhcceEEecchHHhhhcCCcEEEecCCCccccCceEEEEEEec
Q 004259 626 GVGANNGVLIKGGDALERAQKIKYVIFDKTGTLTQGRATVTTAKVF 671 (765)
Q Consensus 626 ~~~~~~gilik~~~~le~lg~v~~i~fDKTGTLT~g~~~v~~~~~~ 671 (765)
.+++++|+++|+++++|+||++++||||||||||+|+|+|.+++..
T Consensus 359 ~rmak~~~lvr~l~avE~LG~v~~IcsDKTGTLT~n~m~v~~~~~~ 404 (1034)
T 3ixz_A 359 KRLASKNCVVKNLEAVETLGSTSVICSDKTGTLTQNRMTVSHLWFD 404 (1034)
T ss_pred HHHhhCCeEecChHHHHhhcCCcEEEcCCCCCcccCeEEEEEEEEC
Confidence 9999999999999999999999999999999999999999998764
No 9
>2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F
Probab=99.95 E-value=5.7e-28 Score=214.22 Aligned_cols=111 Identities=50% Similarity=0.766 Sum_probs=106.5
Q ss_pred HHHHHHhcCCCeEEEEEecCCCceeeeEEeeccCcCCCCEEEEcCCCccCccEEEEeccceeeccccCCCcceeccCCCC
Q 004259 425 AIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQSGDTLKVLPGTKLPADGIVVWGTSYVNESMVTGEAVPVLKEINS 504 (765)
Q Consensus 425 ~l~~l~~~~~~~~~v~~~~~~g~~~~~~~i~~~~l~~GDiv~v~~Ge~iP~Dg~vl~g~~~Vdes~LTGEs~pv~k~~g~ 504 (765)
++++|.++.|.+++++ |+| ++++|++++|+|||+|.|++||+|||||+|++|.+.||||+|||||.|+.|.+|+
T Consensus 2 al~~L~~l~p~~a~v~---r~g---~~~~i~~~~l~~GDiv~v~~G~~iPaDg~v~~g~~~vdeS~LTGEs~pv~k~~g~ 75 (113)
T 2hc8_A 2 AIKKLVGLQAKTAVVI---RDG---KEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGESYVDESMISGEPVPVLKSKGD 75 (113)
T ss_dssp HHHHHHHHSCSEEEEE---ETT---EEEEEEGGGCCTTCEEEECTTCBCCSEEEEEECCEEEECHHHHCCSSCEEECTTC
T ss_pred HHHHHhcCCCCEEEEE---ECC---EEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEceEEEEccccCCCCccEEECCCC
Confidence 5778889999999999 777 7889999999999999999999999999999999999999999999999999999
Q ss_pred ceeeeeeeecceEEEEEEEeCCcchHHHHHHHHHHhc
Q 004259 505 PVIGGTINLHGVLHIQATKVGSDAVLSQIISLVETAQ 541 (765)
Q Consensus 505 ~v~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~~~~~~ 541 (765)
.+|+||+|.+|.++++|+++|.+|++++|.+++++++
T Consensus 76 ~v~aGt~~~~G~~~~~V~~~g~~T~~~~i~~lv~~a~ 112 (113)
T 2hc8_A 76 EVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAM 112 (113)
T ss_dssp EECTTCEECSSCEEEEEEECGGGSHHHHHHHHHHHHH
T ss_pred EEEeCCEEeeceEEEEEEEecCcCHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999998875
No 10
>2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens}
Probab=99.94 E-value=7.7e-28 Score=217.33 Aligned_cols=123 Identities=47% Similarity=0.675 Sum_probs=107.9
Q ss_pred hchHHHHHHHHHhcCCCeEEEEEecCCCceeeeEEeeccCcCCCCEEEEcCCCccCccEEEEeccceeeccccCCCccee
Q 004259 419 KGKTSDAIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQSGDTLKVLPGTKLPADGIVVWGTSYVNESMVTGEAVPV 498 (765)
Q Consensus 419 ~~k~~~~l~~l~~~~~~~~~v~~~~~~g~~~~~~~i~~~~l~~GDiv~v~~Ge~iP~Dg~vl~g~~~Vdes~LTGEs~pv 498 (765)
++|+.+++++|.++.|.++++++.++++....+++|++++|+|||+|.|++||+|||||+|++|.+.||||+|||||.|+
T Consensus 2 ~~ka~~~l~~L~~l~p~~a~v~r~g~~~~~~~~~~v~~~~l~~GDiv~v~~G~~iPaDg~vi~g~~~vdeS~LTGEs~pv 81 (124)
T 2kij_A 2 SFTMSEALAKLISLQATEATIVTLDSDNILLSEEQVDVELVQRGDIIKVVPGGKFPVDGRVIEGHSMVDESLITGEAMPV 81 (124)
T ss_dssp ----CCHHHHHHHTCCSEEEEEECSSSTTCCEEEEEETTTCCTTCEEECCTTCBCSSCEEECSCCCEEECTTTTCCSSCE
T ss_pred hHHHHHHHHHHhccCCCEEEEEECCCCCceeEEEEEeHHHCCCCCEEEECCCCEEEeeEEEEEccEEEEeccccCCCccE
Confidence 45788899999999999999994322331112578999999999999999999999999999999999999999999999
Q ss_pred ccCCCCceeeeeeeecceEEEEEEEeCCcchHHHHHHHHHHhc
Q 004259 499 LKEINSPVIGGTINLHGVLHIQATKVGSDAVLSQIISLVETAQ 541 (765)
Q Consensus 499 ~k~~g~~v~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~~~~~~ 541 (765)
.|.+|+.||+||+|.+|.+.++|+++|.+|++++|++++++++
T Consensus 82 ~k~~g~~v~aGt~~~~G~~~~~v~~~g~~T~~~~I~~lv~~a~ 124 (124)
T 2kij_A 82 AKKPGSTVIAGSINQNGSLLICATHVGADTTLSQIVKLVEEAQ 124 (124)
T ss_dssp ECCTTEEECTTCEEESSCCEEEECSCTTTCHHHHHHHHTTTTC
T ss_pred EeCCCCEEEcCCEEeeeEEEEEEEEecccCHHHHHHHHHHhhC
Confidence 9999999999999999999999999999999999999987754
No 11
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}
Probab=99.84 E-value=2.1e-20 Score=176.22 Aligned_cols=145 Identities=38% Similarity=0.631 Sum_probs=128.3
Q ss_pred ceEEEEEeCCCCChhhHHHHHHhhhCCCCeeEEEEEeccCEEEEEECCCCCCHHHHHHHhHhcCcchhhhcccCCCCCCC
Q 004259 45 MRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEILAESSTSGPKP 124 (765)
Q Consensus 45 ~~~~~~~i~gm~C~~C~~~Ie~~l~~~~Gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~~~~~~~~~ 124 (765)
|.+..|.|+||+|++|++++++++++++||..+.+++.++++.+.+++...+.+++.+.+++.||.+...... .
T Consensus 3 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~~~~------~ 76 (149)
T 2ew9_A 3 PQKCFLQIKGMTCASCVSNIERNLQKEAGVLSVLVALMAGKAEIKYDPEVIQPLEIAQFIQDLGFEAAVMEDY------A 76 (149)
T ss_dssp CEEEEEEEECCCSSSHHHHHHHHHHTTSSCCCEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCEEEECSCS------C
T ss_pred cEEEEEEECCeecHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEEcCCCCCHHHHHHHHhcCCCceEeeccc------c
Confidence 6678999999999999999999999999999999999999999999876677889999999999986432210 1
Q ss_pred CcceeceeecccccchhhHHHHHhhhcCCCCeeeEEeeeccCeEEEEeCCCCCCHHHHHHHHHhcCCceeE
Q 004259 125 QGTIVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASF 195 (765)
Q Consensus 125 ~~~~~~~~~i~gm~C~~C~~~Ie~~l~~~~GV~~~~vn~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~ 195 (765)
....+..|.|+||+|++|+++|+++|++++||.++++|+.++++.|.|++..++.++|.++++++||++.+
T Consensus 77 ~~~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~ 147 (149)
T 2ew9_A 77 GSDGNIELTITGMTCASCVHNIESKLTRTNGITYASVALATSKALVKFDPEIIGPRDIIKIIEEIGFHASL 147 (149)
T ss_dssp CSSSEEEEEEESCCSHHHHHHHHHHHHHSSSCCEEEEETTTTEEEEECCTTTSCHHHHHHHHHHHTCEEEC
T ss_pred cccceeEEEEEeccCHHHHHHHHHHHhcCCCeEEEEEEcCCCEEEEEECCCCCCHHHHHHHHHhCCCceEe
Confidence 11235679999999999999999999999999999999999999999999888999999999999998764
No 12
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A
Probab=99.82 E-value=2e-19 Score=169.86 Aligned_cols=140 Identities=34% Similarity=0.604 Sum_probs=126.6
Q ss_pred ceEEEEEeCCCCChhhHHHHHHhhhCCCCeeEEEEEeccCEEEEEECCCCCCHHHHHHHhHhcCcchhhhcccCCCCCCC
Q 004259 45 MRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEILAESSTSGPKP 124 (765)
Q Consensus 45 ~~~~~~~i~gm~C~~C~~~Ie~~l~~~~Gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~~~~~~~~~ 124 (765)
+++..+.|+||+|++|++++++.+++++||..+.+++.++++.+.+++...+.+.+.+.+++.||.+.
T Consensus 5 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~------------ 72 (151)
T 1p6t_A 5 QKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLGYHVV------------ 72 (151)
T ss_dssp CEEEEEEEESCCSSHHHHHHHHHHTTSSSEEEEEEEGGGTEEEEEECTTTSCHHHHHHHHHHHTCEEC------------
T ss_pred ceEEEEEECCCcCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEEcCCcCCHHHHHHHHHHcCCccc------------
Confidence 45678999999999999999999999999999999999999999888766677888899999999652
Q ss_pred CcceeceeecccccchhhHHHHHhhhcCCCCeeeEEeeeccCeEEEEeCCCCCCHHHHHHHHHhcCCceeEeec
Q 004259 125 QGTIVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASFVQS 198 (765)
Q Consensus 125 ~~~~~~~~~i~gm~C~~C~~~Ie~~l~~~~GV~~~~vn~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~ 198 (765)
..++.|.|+||+|++|+++||+.|++++||.++++|+.++++.|.|+|..+++++|.+.++++||.+.+..+
T Consensus 73 --~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~ 144 (151)
T 1p6t_A 73 --TEKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDKLGYKLKLKGE 144 (151)
T ss_dssp --CEEEEEEESSCCSSSHHHHHHHHHTTSSSEEECCEETTTTEEEEEECTTTCCHHHHHHHHHHHTCCEEESCS
T ss_pred --ccccEEEecCCCCHHHHHHHHHHHhcCCCceEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCCeEEcCc
Confidence 134679999999999999999999999999999999999999999999888999999999999999876543
No 13
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}
Probab=99.81 E-value=4.5e-19 Score=167.01 Aligned_cols=141 Identities=33% Similarity=0.515 Sum_probs=128.3
Q ss_pred eeceeecccccchhhHHHHHhhhcCCCCeeeEEeeeccCeEEEEeCCCCCCHHHHHHHHHhcCCceeEeec--CCcceeE
Q 004259 128 IVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASFVQS--SGQDKIL 205 (765)
Q Consensus 128 ~~~~~~i~gm~C~~C~~~Ie~~l~~~~GV~~~~vn~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~--~~~~~~~ 205 (765)
.+..|.|+||+|++|+.+|++.|++++||.++.+|+.++++.+.|++...+.+++.+.+++.||.+..... ....++.
T Consensus 4 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~~~~~~~~~~~~ 83 (149)
T 2ew9_A 4 QKCFLQIKGMTCASCVSNIERNLQKEAGVLSVLVALMAGKAEIKYDPEVIQPLEIAQFIQDLGFEAAVMEDYAGSDGNIE 83 (149)
T ss_dssp EEEEEEEECCCSSSHHHHHHHHHHTTSSCCCEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCEEEECSCSCCSSSEEE
T ss_pred EEEEEEECCeecHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEEcCCCCCHHHHHHHHhcCCCceEeecccccccceeE
Confidence 45679999999999999999999999999999999999999999998878889999999999998875432 1235788
Q ss_pred EEEecccchhhhHHHHhhhccCCCceEEEeecCCCeEEEEecCCCCChhhHHHhhhhcCCCcceeE
Q 004259 206 LQVTGVLCELDAHFLEGILSNFKGVRQFRFDKISGELEVLFDPEALSSRSLVDGIAGRSNGKFQIR 271 (765)
Q Consensus 206 ~~i~gm~c~~ca~~ie~~l~~~~GV~~v~vn~~~~~~~V~ydp~~i~~~~i~~~i~~~g~~~~~~~ 271 (765)
|+|.||+|.+|+.+|++.|+.++||.++++|+.++.+.|.|||..++.+++.+.|++.| |+..
T Consensus 84 ~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G---y~~~ 146 (149)
T 2ew9_A 84 LTITGMTCASCVHNIESKLTRTNGITYASVALATSKALVKFDPEIIGPRDIIKIIEEIG---FHAS 146 (149)
T ss_dssp EEEESCCSHHHHHHHHHHHHHSSSCCEEEEETTTTEEEEECCTTTSCHHHHHHHHHHHT---CEEE
T ss_pred EEEEeccCHHHHHHHHHHHhcCCCeEEEEEEcCCCEEEEEECCCCCCHHHHHHHHHhCC---CceE
Confidence 99999999999999999999999999999999999999999999999999999999999 6543
No 14
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}
Probab=99.78 E-value=2e-18 Score=171.59 Aligned_cols=156 Identities=34% Similarity=0.575 Sum_probs=125.9
Q ss_pred CCCceEEEEEeCCCCChhhHHHHHHhhhCCCCeeEEEEEeccCEEEEEECCCCCCHHHHHHHhHhc---CcchhhhcccC
Q 004259 42 GDGMRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDA---GFEAEILAESS 118 (765)
Q Consensus 42 ~~~~~~~~~~i~gm~C~~C~~~Ie~~l~~~~Gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~---Gy~~~~~~~~~ 118 (765)
+..+.+..|.|+||+|++|+++|+++|.+++||..+.+++.++++.+.+++...+.+++.+++++. ||.+.+.....
T Consensus 16 ~~~~~~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~~~gg~~v~~~~~~~ 95 (202)
T 2rop_A 16 GSHVVTLQLRIDGMHCKSCVLNIEENIGQLLGVQSIQVSLENKTAQVKYDPSCTSPVALQRAIEALPPGNFKVSLPDGAE 95 (202)
T ss_dssp ----CEEEEEEESGGGSTHHHHHHHHTTSBTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHTTSSSSCSEEEC-----
T ss_pred CCccEEEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHhccCCeEEEeccccc
Confidence 335677889999999999999999999999999999999999999999987767788899999988 36542211000
Q ss_pred ----------------C-CCCCCCcceeceeecccccchhhHHHHHhhhcCCCCeeeEEeeeccCeEEEEeCCCCCCHHH
Q 004259 119 ----------------T-SGPKPQGTIVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDD 181 (765)
Q Consensus 119 ----------------~-~~~~~~~~~~~~~~i~gm~C~~C~~~Ie~~l~~~~GV~~~~vn~~~~~~~v~~~~~~~~~~~ 181 (765)
. .........+..|.|+||+|++|+.+|+++|++++||.++.+|+.++++.|.|++..++.++
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~ 175 (202)
T 2rop_A 96 GSGTDHRSSSSHSPGSPPRNQVQGTCSTTLIAIAGMTCASCVHSIEGMISQLEGVQQISVSLAEGTATVLYNPAVISPEE 175 (202)
T ss_dssp ------------------------CCEEEEEEESCCCSTHHHHHHHHHGGGSSSEEEEEEETTTTEEEEEECTTTCCHHH
T ss_pred cccccccccccccccccccccccccceEEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEccCCEEEEEECCCCCCHHH
Confidence 0 00000112457899999999999999999999999999999999999999999998889999
Q ss_pred HHHHHHhcCCceeEee
Q 004259 182 IANAIEDAGFEASFVQ 197 (765)
Q Consensus 182 i~~~i~~~Gy~~~~~~ 197 (765)
|.+.|+++||.+.+..
T Consensus 176 i~~~i~~~Gy~~~~~~ 191 (202)
T 2rop_A 176 LRAAIEDMGFEASVVS 191 (202)
T ss_dssp HHHHHHHHTSCEEEC-
T ss_pred HHHHHHHcCCceEEcC
Confidence 9999999999987643
No 15
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A
Probab=99.77 E-value=4.5e-18 Score=160.57 Aligned_cols=137 Identities=27% Similarity=0.450 Sum_probs=126.0
Q ss_pred eeceeecccccchhhHHHHHhhhcCCCCeeeEEeeeccCeEEEEeCCCCCCHHHHHHHHHhcCCceeEeecCCcceeEEE
Q 004259 128 IVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASFVQSSGQDKILLQ 207 (765)
Q Consensus 128 ~~~~~~i~gm~C~~C~~~Ie~~l~~~~GV~~~~vn~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~~~~~~~~~~ 207 (765)
++..+.|+||+|++|+.++++.+++++||.++.+|+.++++.+.|++...+.+++.+.+++.||.+. ..++.|.
T Consensus 6 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~------~~~~~~~ 79 (151)
T 1p6t_A 6 KEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLGYHVV------TEKAEFD 79 (151)
T ss_dssp EEEEEEEESCCSSHHHHHHHHHHTTSSSEEEEEEEGGGTEEEEEECTTTSCHHHHHHHHHHHTCEEC------CEEEEEE
T ss_pred eEEEEEECCCcCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEEcCCcCCHHHHHHHHHHcCCccc------ccccEEE
Confidence 4567999999999999999999999999999999999999999999877788999999999999763 2467899
Q ss_pred EecccchhhhHHHHhhhccCCCceEEEeecCCCeEEEEecCCCCChhhHHHhhhhcCCCcceeEec
Q 004259 208 VTGVLCELDAHFLEGILSNFKGVRQFRFDKISGELEVLFDPEALSSRSLVDGIAGRSNGKFQIRVM 273 (765)
Q Consensus 208 i~gm~c~~ca~~ie~~l~~~~GV~~v~vn~~~~~~~V~ydp~~i~~~~i~~~i~~~g~~~~~~~~~ 273 (765)
+.||+|.+|+.+||+.|..++||.++++|+.++++.|.|||..++.+++.+.|+..| |+....
T Consensus 80 v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G---y~~~~~ 142 (151)
T 1p6t_A 80 IEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDKLG---YKLKLK 142 (151)
T ss_dssp ESSCCSSSHHHHHHHHHTTSSSEEECCEETTTTEEEEEECTTTCCHHHHHHHHHHHT---CCEEES
T ss_pred ecCCCCHHHHHHHHHHHhcCCCceEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcC---CCeEEc
Confidence 999999999999999999999999999999999999999999999999999999999 766543
No 16
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}
Probab=99.72 E-value=5.3e-17 Score=161.29 Aligned_cols=143 Identities=29% Similarity=0.523 Sum_probs=125.1
Q ss_pred ceeceeecccccchhhHHHHHhhhcCCCCeeeEEeeeccCeEEEEeCCCCCCHHHHHHHHHhc---CCceeEeec-----
Q 004259 127 TIVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDA---GFEASFVQS----- 198 (765)
Q Consensus 127 ~~~~~~~i~gm~C~~C~~~Ie~~l~~~~GV~~~~vn~~~~~~~v~~~~~~~~~~~i~~~i~~~---Gy~~~~~~~----- 198 (765)
..+..|.|+||+|++|+.+|++.|.+++||.++.+|+.++++.|.|++...+.+++.+.++++ ||.+.....
T Consensus 19 ~~~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~~~gg~~v~~~~~~~~~~ 98 (202)
T 2rop_A 19 VVTLQLRIDGMHCKSCVLNIEENIGQLLGVQSIQVSLENKTAQVKYDPSCTSPVALQRAIEALPPGNFKVSLPDGAEGSG 98 (202)
T ss_dssp -CEEEEEEESGGGSTHHHHHHHHTTSBTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHTTSSSSCSEEEC--------
T ss_pred cEEEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHhccCCeEEEecccccccc
Confidence 345679999999999999999999999999999999999999999998878899999999998 366532110
Q ss_pred --------------------CCcceeEEEEecccchhhhHHHHhhhccCCCceEEEeecCCCeEEEEecCCCCChhhHHH
Q 004259 199 --------------------SGQDKILLQVTGVLCELDAHFLEGILSNFKGVRQFRFDKISGELEVLFDPEALSSRSLVD 258 (765)
Q Consensus 199 --------------------~~~~~~~~~i~gm~c~~ca~~ie~~l~~~~GV~~v~vn~~~~~~~V~ydp~~i~~~~i~~ 258 (765)
....+..|+|.||+|.+|+..|++.|..++||.++++|+.++.+.|.|+|..++.+++.+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~ 178 (202)
T 2rop_A 99 TDHRSSSSHSPGSPPRNQVQGTCSTTLIAIAGMTCASCVHSIEGMISQLEGVQQISVSLAEGTATVLYNPAVISPEELRA 178 (202)
T ss_dssp ---------------------CCEEEEEEESCCCSTHHHHHHHHHGGGSSSEEEEEEETTTTEEEEEECTTTCCHHHHHH
T ss_pred ccccccccccccccccccccccceEEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEccCCEEEEEECCCCCCHHHHHH
Confidence 011457899999999999999999999999999999999999999999999899999999
Q ss_pred hhhhcCCCcceeEe
Q 004259 259 GIAGRSNGKFQIRV 272 (765)
Q Consensus 259 ~i~~~g~~~~~~~~ 272 (765)
.|+..| |....
T Consensus 179 ~i~~~G---y~~~~ 189 (202)
T 2rop_A 179 AIEDMG---FEASV 189 (202)
T ss_dssp HHHHHT---SCEEE
T ss_pred HHHHcC---CceEE
Confidence 999999 76554
No 17
>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*
Probab=99.55 E-value=5.2e-19 Score=183.40 Aligned_cols=111 Identities=36% Similarity=0.467 Sum_probs=99.0
Q ss_pred HHHHHHhhcceEEecchHHhhhcCCcEEEecCCCccccCceEEEEEEecCCCCHHHHHHHHHHHHccCCChHHHHHHHHH
Q 004259 623 VATGVGANNGVLIKGGDALERAQKIKYVIFDKTGTLTQGRATVTTAKVFTKMDRGEFLTLVASAEASSEHPLAKAVVEYA 702 (765)
Q Consensus 623 ~~~~~~~~~gilik~~~~le~lg~v~~i~fDKTGTLT~g~~~v~~~~~~~~~~~~~~l~~a~~~e~~s~hPia~Ai~~~~ 702 (765)
.++++++|+||++|+++++|.++++++|+||||||||+|+|.+.++. ++++++++++++|..|+||+++|+.+++
T Consensus 4 ~a~~~~~~~gil~k~~~~le~l~~i~~v~fDktGTLT~g~~~v~~~~-----~~~~~l~~~~~~e~~s~hp~a~ai~~~~ 78 (263)
T 2yj3_A 4 SLYEKMLHKGMIIKNSNVYEKIKEIDTIIFEKTGTLTYGTPIVTQFI-----GDSLSLAYAASVEALSSHPIAKAIVKYA 78 (263)
Confidence 56789999999999999999999999999999999999999999885 4678999999999999999999999988
Q ss_pred HhccCCCCCCCCCCCCCCCcCcCCCCcccCCCceeeecCCeeEEEEcCeEEEeeccc
Q 004259 703 RHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVSFRF 759 (765)
Q Consensus 703 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~Gv~~~~~g~~~~vG~~~ 759 (765)
++. +....+.+++++++|+|+.+.+++..+.+|+++
T Consensus 79 ~~~---------------------g~~~~~~~~~~~~~G~g~~~~~~~~~~~~G~~~ 114 (263)
T 2yj3_A 79 KEQ---------------------GVKILEVKDFKEISGIGVRGKISDKIIEVKKAE 114 (263)
Confidence 665 222345678999999999999999999999764
No 18
>2kmv_A Copper-transporting ATPase 1; menkes, nucleotide binding protein, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} PDB: 2kmx_A*
Probab=99.63 E-value=6.2e-16 Score=149.57 Aligned_cols=76 Identities=32% Similarity=0.567 Sum_probs=64.8
Q ss_pred CccccCceEEEEEEecC---CCCHHHHHHHHHHHHccCCChHHHHHHHHHHhccCCCCCCCCCCCCCCCcCcCCCCcccC
Q 004259 656 GTLTQGRATVTTAKVFT---KMDRGEFLTLVASAEASSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLD 732 (765)
Q Consensus 656 GTLT~g~~~v~~~~~~~---~~~~~~~l~~a~~~e~~s~hPia~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 732 (765)
||||+|+|.|+++..+. +++++++|++++++|++|+||+|+||++++++.. + ...+..
T Consensus 1 GTLT~G~p~V~~v~~~~~~~~~~~~~lL~laaa~E~~SeHPlA~AIv~~a~~~~----------~---------~~~~~~ 61 (185)
T 2kmv_A 1 SFTMHGTPVVNQVKVLTESNRISHHKILAIVGTAESNSEHPLGTAITKYCKQEL----------D---------TETLGT 61 (185)
T ss_dssp CCCCSCCCEEEEEEECSCTTTSCHHHHHHHHHHGGGSSSCHHHHHHHHHHHHHH----------T---------CSCCCC
T ss_pred CCCcCCcEEEEEEEecCCcCCCCHHHHHHHHHHHHccCCCHHHHHHHHHHHhhc----------C---------CCCCCC
Confidence 89999999999998874 4578899999999999999999999999997641 0 011345
Q ss_pred CCceeeecCCeeEEEEcC
Q 004259 733 VSDFSALPGRGIQCFISG 750 (765)
Q Consensus 733 ~~~~~~~~G~Gv~~~~~g 750 (765)
+++|+++||+||+|+|+|
T Consensus 62 ~~~f~~i~G~Gv~~~V~g 79 (185)
T 2kmv_A 62 CIDFQVVPGCGISCKVTN 79 (185)
T ss_dssp CBCCEEETTTEEEEEECC
T ss_pred ccceEEeccceEEEEECC
Confidence 789999999999999999
No 19
>2arf_A Wilson disease ATPase; P-type ATPase,ATP7B, copper transport, nucleotide binding, ATP binding, hydrolase; NMR {Homo sapiens} PDB: 2koy_A
Probab=99.53 E-value=1.2e-14 Score=138.61 Aligned_cols=85 Identities=33% Similarity=0.407 Sum_probs=73.2
Q ss_pred cccCceEEEEEEecCC---CCHHHHHHHHHHHHccCCChHHHHHHHHHHhccCCCCCCCCCCCCCCCcCcCCCCc-ccCC
Q 004259 658 LTQGRATVTTAKVFTK---MDRGEFLTLVASAEASSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGW-LLDV 733 (765)
Q Consensus 658 LT~g~~~v~~~~~~~~---~~~~~~l~~a~~~e~~s~hPia~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 733 (765)
||+|+|+|+++..+.+ .+.+++|++++++|++|+||||+||+++++++. +.. +..+
T Consensus 1 LT~G~p~V~~v~~~~~~~~~~~~~lL~laaslE~~SeHPlA~AIv~~a~~~~--------------------~~~~~~~~ 60 (165)
T 2arf_A 1 AGHMVPRVMRVLLLGDVATLPLRKVLAVVGTAEASSEHPLGVAVTKYCKEEL--------------------GTETLGYC 60 (165)
T ss_dssp CCCCCCCEEEEEECCCTTTSCHHHHHHHHHHHHTTSCSTTHHHHHHHHHHHH--------------------TCCCCCCE
T ss_pred CCCceeEEEEEEeeCCcCCCCHHHHHHHHHHHHccCCChHHHHHHHHHHHhc--------------------CCCCCCCc
Confidence 8999999999987753 578899999999999999999999999997641 011 2456
Q ss_pred CceeeecCCeeEEEEcCe-----------------------------------EEEeecccccc
Q 004259 734 SDFSALPGRGIQCFISGK-----------------------------------QVLVSFRFHRT 762 (765)
Q Consensus 734 ~~~~~~~G~Gv~~~~~g~-----------------------------------~~~vG~~~~~~ 762 (765)
++|+++||+||+|+|+|+ +|+|||++||+
T Consensus 61 ~~f~~i~G~Gv~a~v~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~iGn~~~m~ 124 (165)
T 2arf_A 61 TDFQAVPGCGIGCKVSNVEGILAHSERPLSAPASHLNEAGSLPAEKDAVPQTFSVLIGNREWLR 124 (165)
T ss_dssp EEEEEETTTEEEEEEECHHHHHSCCCCCCCCCCCCSSSSCCCCCCCCCCCCEEEEEEECHHHHH
T ss_pred CceEEecCccEEEEEcCcccccccccccccccccccccccccccccccCCCceEEEEcCHHHHH
Confidence 899999999999999997 99999999985
No 20
>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I
Probab=99.51 E-value=3.4e-14 Score=149.15 Aligned_cols=113 Identities=40% Similarity=0.514 Sum_probs=94.1
Q ss_pred HHHHHHhhcceEEecchHHhhhcCCcEEEecCCCccccCceEEEEEEecCCCCHHHHHHHHHHHHccCCChHHHHHHHHH
Q 004259 623 VATGVGANNGVLIKGGDALERAQKIKYVIFDKTGTLTQGRATVTTAKVFTKMDRGEFLTLVASAEASSEHPLAKAVVEYA 702 (765)
Q Consensus 623 ~~~~~~~~~gilik~~~~le~lg~v~~i~fDKTGTLT~g~~~v~~~~~~~~~~~~~~l~~a~~~e~~s~hPia~Ai~~~~ 702 (765)
.+.++++|+||++|+++++|.++++++|+||||||||.+.+.+.+++..++ ++++++++++++|+.|.||+++|+.+++
T Consensus 8 ~~~~~~~~~gilik~~~~le~l~~i~~viFD~dGTL~ds~~~~~~~~~~~~-~~~~~l~~~~~~e~~s~hp~~~a~~~~~ 86 (287)
T 3a1c_A 8 HGSRKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNG-DERELLRLAAIAERRSEHPIAEAIVKKA 86 (287)
T ss_dssp ------CCCCEEECSTTHHHHHHHCCEEEEECCCCCBCSCCEEEEEEESSS-CHHHHHHHHHHHTTTCCSHHHHHHHHHH
T ss_pred hhHHHHHHCCEEEeCcHHHHHhhcCCEEEEeCCCCCcCCCEEEEEEEeCCC-CHHHHHHHHHHHhhcCCCHHHHHHHHHH
Confidence 356789999999999999999999999999999999999999999998887 8899999999999999999999999998
Q ss_pred HhccCCCCCCCCCCCCCCCcCcCCCCcccCCCceeeecCCeeEEEEcCeEEEeeccccc
Q 004259 703 RHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVSFRFHR 761 (765)
Q Consensus 703 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~Gv~~~~~g~~~~vG~~~~~ 761 (765)
++. +......++++..+|.|+.+ .++.+|+.+|+
T Consensus 87 ~~~---------------------g~~~~~~~~~~~~~G~~~~~----~~~~~g~~~~~ 120 (287)
T 3a1c_A 87 LEH---------------------GIELGEPEKVEVIAGEGVVA----DGILVGNKRLM 120 (287)
T ss_dssp HHT---------------------TCCCCCCSCEEEETTTEEEE----TTEEEECHHHH
T ss_pred Hhc---------------------CCCccccccceeecCCCeEE----EEEEECCHHHH
Confidence 775 22223456788999999988 56777876553
No 21
>1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A*
Probab=99.40 E-value=2.9e-13 Score=126.65 Aligned_cols=86 Identities=17% Similarity=0.147 Sum_probs=67.2
Q ss_pred CCCccccCceEEEEEEecCCCCHHHHHHHHHHHHccCCChHHHHHHHHHHhc-cCCCCCCCCCCCCCCCcCcCCCCcccC
Q 004259 654 KTGTLTQGRATVTTAKVFTKMDRGEFLTLVASAEASSEHPLAKAVVEYARHF-HFFDDPSLNPDGQSHSKESTGSGWLLD 732 (765)
Q Consensus 654 KTGTLT~g~~~v~~~~~~~~~~~~~~l~~a~~~e~~s~hPia~Ai~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 732 (765)
..||+|-|+++++++.+.+++++++++++|+++|+.|+||+|+||+++|+++ + ..+++
T Consensus 13 ~~~tit~gnr~vt~v~~~~g~~e~elL~lAAs~E~~SeHPla~AIv~~A~~~~~---------------------l~~~~ 71 (156)
T 1svj_A 13 SSGHGGRHNRQASEFIPAQGVDEKTLADAAQLASLADETPEGRSIVILAKQRFN---------------------LRERD 71 (156)
T ss_dssp --------CEEEEEEEECTTSCHHHHHHHHHHTTSSCCSHHHHHHHHHHHHHTT---------------------CCCCC
T ss_pred CCCceecCCCeEEEEEecCCCCHHHHHHHHHHHhCcCCCHHHHHHHHHHHHhcC---------------------CCccc
Confidence 4799999999999999988899999999999999999999999999999875 2 11222
Q ss_pred -------CCceeeecC-CeeEEEEcCeEEEeec----ccccc
Q 004259 733 -------VSDFSALPG-RGIQCFISGKQVLVSF----RFHRT 762 (765)
Q Consensus 733 -------~~~~~~~~G-~Gv~~~~~g~~~~vG~----~~~~~ 762 (765)
+.+|+.++| +|| .++|++|++|| ++||+
T Consensus 72 ~~~~~~~~~~F~a~~G~~Gv--~v~G~~v~vGn~~~i~~l~~ 111 (156)
T 1svj_A 72 VQSLHATFVPFTAQSRMSGI--NIDNRMIRKGSVDAIRRHVE 111 (156)
T ss_dssp HHHHTCEEEEEETTTTEEEE--EETTEEEEEEEHHHHHHHHH
T ss_pred ccccccceeeccccCCCCeE--EECCEEEEEeCcHHHHHHHH
Confidence 368899999 999 67999999999 66774
No 22
>3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} SCOP: d.58.17.0
Probab=99.28 E-value=9.6e-12 Score=101.50 Aligned_cols=70 Identities=46% Similarity=0.697 Sum_probs=65.5
Q ss_pred eeceeecccccchhhHHHHHhhhcCCCCeeeEEeeeccCeEEEEeCCCCCCHHHHHHHHHhcCCceeEee
Q 004259 128 IVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASFVQ 197 (765)
Q Consensus 128 ~~~~~~i~gm~C~~C~~~Ie~~l~~~~GV~~~~vn~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 197 (765)
++..+.|+||+|++|+.+|+++|++++||.++++|+.++++.|.|++..++.++|.++|+++||++.+.+
T Consensus 2 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 71 (74)
T 3dxs_X 2 RKIQVGVTGMTCAACSNSVEAALMNVNGVFKASVALLQNRADVVFDPNLVKEEDIKEEIEDAGFEAEILA 71 (74)
T ss_dssp EEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHTCEEEEEE
T ss_pred cEEEEEECCcCCHHHHHHHHHHHhcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHCCCceEEcc
Confidence 3567999999999999999999999999999999999999999999988899999999999999998654
No 23
>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A*
Probab=99.23 E-value=2.7e-11 Score=125.83 Aligned_cols=106 Identities=41% Similarity=0.588 Sum_probs=92.2
Q ss_pred EecchHHhhhcCCcEEEecCCCccccCceEEEEEEecCCCCHHHHHHHHHHHHccCCChHHHHHHHHHHhccCCCCCCCC
Q 004259 635 IKGGDALERAQKIKYVIFDKTGTLTQGRATVTTAKVFTKMDRGEFLTLVASAEASSEHPLAKAVVEYARHFHFFDDPSLN 714 (765)
Q Consensus 635 ik~~~~le~lg~v~~i~fDKTGTLT~g~~~v~~~~~~~~~~~~~~l~~a~~~e~~s~hPia~Ai~~~~~~~~~~~~~~~~ 714 (765)
+|+++++|.+++++.|+||++||||.|+++|.++...++ +.++++.++++++..+.||+.+++.+++++.
T Consensus 1 ~k~~~~~e~~~~ik~i~FD~DGTL~d~~~~v~~~~~~~~-~~~~~~~~~~~~~~~s~~~~~~a~~~~~~~~--------- 70 (280)
T 3skx_A 1 MRDRQAFERAKDLQAVIFDKTGTLTEGRFGVTDIVGFNH-SEDELLQIAASLEARSEHPIAAAIVEEAEKR--------- 70 (280)
T ss_dssp ----CHHHHGGGCCEEEEECCCCCEEEEEEEEEEEESSS-CHHHHHHHHHHHHTTCCSHHHHHHHHHHHHT---------
T ss_pred CCChHHHHHhcCCCEEEEeCCCcCCCCcEEEEEEEecCC-CHHHHHHHHHHhhccCCCHHHHHHHHHHHhc---------
Confidence 588999999999999999999999999999999999888 8899999999999999999999999998876
Q ss_pred CCCCCCCcCcCCCCcccCCCceeeecCCeeEEEEcCeEEEeecccccc
Q 004259 715 PDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVSFRFHRT 762 (765)
Q Consensus 715 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~Gv~~~~~g~~~~vG~~~~~~ 762 (765)
+......+++...+|.|+.+.++|.++.+|+..+++
T Consensus 71 ------------g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 106 (280)
T 3skx_A 71 ------------GFGLTEVEEFRAIPGKGVEGIVNGRRYMVVSPGYIR 106 (280)
T ss_dssp ------------TCCCCCCEEEEEETTTEEEEEETTEEEEEECHHHHH
T ss_pred ------------CCCCCCccceeecCCCEEEEEECCEEEEEecHHHHH
Confidence 222345678899999999999999999999987754
No 24
>4a4j_A Pacszia, cation-transporting ATPase PACS; hydrolase, copper homeostasis, zinc homeostasis, ATX1, metal-transporting atpases; 1.25A {Synechocystis} PDB: 4a48_A 2gcf_A 2xmw_A
Probab=99.20 E-value=4.2e-11 Score=96.15 Aligned_cols=66 Identities=27% Similarity=0.516 Sum_probs=62.1
Q ss_pred eceeecccccchhhHHHHHhhhcCCCCeeeEEeeeccCeEEEEeCCCCCCHHHHHHHHHhcCCceeE
Q 004259 129 VGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASF 195 (765)
Q Consensus 129 ~~~~~i~gm~C~~C~~~Ie~~l~~~~GV~~~~vn~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~ 195 (765)
+..+.|+||+|++|+.+|+++|++++||.++++|+.++++.|.| +...++++|.++|+++||++.+
T Consensus 3 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~-~~~~~~~~i~~~i~~~Gy~~~~ 68 (69)
T 4a4j_A 3 TINLQLEGMDCTSCASSIERAIAKVPGVQSCQVNFALEQAVVSY-HGETTPQILTDAVERAGYHARV 68 (69)
T ss_dssp EEEEEEESCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEE-CTTCCHHHHHHHHHHTTCEEEE
T ss_pred EEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEE-CCCCCHHHHHHHHHHcCCceEe
Confidence 46799999999999999999999999999999999999999999 6778999999999999999864
No 25
>3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} SCOP: d.58.17.0
Probab=99.15 E-value=1e-10 Score=95.26 Aligned_cols=70 Identities=84% Similarity=1.210 Sum_probs=65.2
Q ss_pred ceEEEEEeCCCCChhhHHHHHHhhhCCCCeeEEEEEeccCEEEEEECCCCCCHHHHHHHhHhcCcchhhh
Q 004259 45 MRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEIL 114 (765)
Q Consensus 45 ~~~~~~~i~gm~C~~C~~~Ie~~l~~~~Gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~ 114 (765)
|++.+|.|+||+|++|+++|+++|++++||.++.+|+.++++.+.+++...+.+++.+++++.||++.+.
T Consensus 1 M~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~ 70 (74)
T 3dxs_X 1 MRKIQVGVTGMTCAACSNSVEAALMNVNGVFKASVALLQNRADVVFDPNLVKEEDIKEEIEDAGFEAEIL 70 (74)
T ss_dssp CEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHTCEEEEE
T ss_pred CcEEEEEECCcCCHHHHHHHHHHHhcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHCCCceEEc
Confidence 5678999999999999999999999999999999999999999999887788999999999999987653
No 26
>2ofg_X Zinc-transporting ATPase; ferredoxin-like fold, beta-alpha-beta-BETA-alpha-beta, struc genomics, hydrolase, membrane protein; NMR {Synechocystis SP} PDB: 2ofh_X
Probab=99.14 E-value=7.2e-11 Score=104.71 Aligned_cols=81 Identities=32% Similarity=0.473 Sum_probs=73.7
Q ss_pred ceeceeecccccchhhHHHHHhhhcCCCCeeeEEeeeccCeEEEEeCCCCCCHHHHHHHHHhcCCceeEeecCCcceeEE
Q 004259 127 TIVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASFVQSSGQDKILL 206 (765)
Q Consensus 127 ~~~~~~~i~gm~C~~C~~~Ie~~l~~~~GV~~~~vn~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~~~~~~~~~ 206 (765)
+.+..|.|+||+|++|+.+|++.|++++||.++++|+.++++.|.|++...+.++|.+.++++||.+... ...+
T Consensus 7 ~~~~~l~v~Gm~C~~Ca~~Ie~~L~~~~GV~~v~v~~~~~~~~V~~~~~~~~~~~i~~~i~~~Gy~~~~~------~~~l 80 (111)
T 2ofg_X 7 LKTQQMQVGGMDCTSCKLKIEGSLERLKGVAEASVTVATGRLTVTYDPKQVSEITIQERIAALGYTLAEP------KSSV 80 (111)
T ss_dssp CEEEEEEESCCCGGGTHHHHHHHHTTSSSEEEEEEETTTTEEEEEECTTTCSHHHHHHHHHTTTCCEECC------CCCC
T ss_pred ceEEEEEECCcCCHHHHHHHHHHHHcCCCeeEEEEECCCCEEEEEECCCCCCHHHHHHHHHHcCCeeeec------ceee
Confidence 4567899999999999999999999999999999999999999999988788899999999999987642 3568
Q ss_pred EEecccc
Q 004259 207 QVTGVLC 213 (765)
Q Consensus 207 ~i~gm~c 213 (765)
.|.||.|
T Consensus 81 ~V~G~~~ 87 (111)
T 2ofg_X 81 TLNGHKH 87 (111)
T ss_dssp CCCCCCC
T ss_pred eccCccC
Confidence 9999999
No 27
>2ofg_X Zinc-transporting ATPase; ferredoxin-like fold, beta-alpha-beta-BETA-alpha-beta, struc genomics, hydrolase, membrane protein; NMR {Synechocystis SP} PDB: 2ofh_X
Probab=99.10 E-value=2.8e-10 Score=100.91 Aligned_cols=83 Identities=31% Similarity=0.532 Sum_probs=73.2
Q ss_pred CCceEEEEEeCCCCChhhHHHHHHhhhCCCCeeEEEEEeccCEEEEEECCCCCCHHHHHHHhHhcCcchhhhcccCCCCC
Q 004259 43 DGMRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEILAESSTSGP 122 (765)
Q Consensus 43 ~~~~~~~~~i~gm~C~~C~~~Ie~~l~~~~Gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~~~~~~~ 122 (765)
..|++..|.|+||+|++|+++|+++|++++||..+.+|+.++++.+.+++...+.+++.+++++.||.+..
T Consensus 5 ~~~~~~~l~v~Gm~C~~Ca~~Ie~~L~~~~GV~~v~v~~~~~~~~V~~~~~~~~~~~i~~~i~~~Gy~~~~--------- 75 (111)
T 2ofg_X 5 SPLKTQQMQVGGMDCTSCKLKIEGSLERLKGVAEASVTVATGRLTVTYDPKQVSEITIQERIAALGYTLAE--------- 75 (111)
T ss_dssp -CCEEEEEEESCCCGGGTHHHHHHHHTTSSSEEEEEEETTTTEEEEEECTTTCSHHHHHHHHHTTTCCEEC---------
T ss_pred CcceEEEEEECCcCCHHHHHHHHHHHHcCCCeeEEEEECCCCEEEEEECCCCCCHHHHHHHHHHcCCeeee---------
Confidence 35778899999999999999999999999999999999999999999987767788999999999997632
Q ss_pred CCCcceeceeecccccc
Q 004259 123 KPQGTIVGQYTIGGMTC 139 (765)
Q Consensus 123 ~~~~~~~~~~~i~gm~C 139 (765)
....+.|+||+|
T Consensus 76 -----~~~~l~V~G~~~ 87 (111)
T 2ofg_X 76 -----PKSSVTLNGHKH 87 (111)
T ss_dssp -----CCCCCCCCCCCC
T ss_pred -----cceeeeccCccC
Confidence 124699999999
No 28
>3fry_A Probable copper-exporting P-type ATPase A; transport protein, metal binding domain, domain SWAP, ATP-BI cell membrane, copper transport; HET: CIT; 2.00A {Archaeoglobus fulgidus}
Probab=99.09 E-value=1.3e-10 Score=94.54 Aligned_cols=66 Identities=24% Similarity=0.384 Sum_probs=61.3
Q ss_pred ceeceeecccccchhhHHHHHhhhcCCCCeeeEEeeeccCeEEEEeCCCCCCHHHHHHHHHhcCCceeEee
Q 004259 127 TIVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASFVQ 197 (765)
Q Consensus 127 ~~~~~~~i~gm~C~~C~~~Ie~~l~~~~GV~~~~vn~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 197 (765)
+++..|.|+||+|++|+.+|+++|++ +||..+++|+.++++.|.|+ ++++|.++|+++||++.+.+
T Consensus 4 m~~~~~~v~gm~C~~C~~~ie~~l~~-~gv~~~~v~~~~~~~~v~~~----~~~~i~~~i~~~Gy~~~~~~ 69 (73)
T 3fry_A 4 VEKIVLELSGLSCHHCVARVKKALEE-AGAKVEKVDLNEAVVAGNKE----DVDKYIKAVEAAGYQAKLRS 69 (73)
T ss_dssp CEEEEEEEESSBCGGGHHHHHHHHHH-TTCEEEEECSSEEEEEEEGG----GHHHHHHHHHHTTCEEEECC
T ss_pred cEEEEEEECCCCCHHHHHHHHHHhcc-CCcEEEEEEccCCEEEEEEC----CHHHHHHHHHHcCCceEecC
Confidence 45678999999999999999999999 99999999999999999987 68999999999999998754
No 29
>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} SCOP: d.58.17.1 PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A
Probab=99.07 E-value=2.2e-10 Score=91.72 Aligned_cols=64 Identities=23% Similarity=0.463 Sum_probs=59.0
Q ss_pred eceeecccccchhhHHHHHhhhcCCCCeeeEEeeeccCeEEEEeCCCCCCHHHHHHHHHhcCCceeEee
Q 004259 129 VGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASFVQ 197 (765)
Q Consensus 129 ~~~~~i~gm~C~~C~~~Ie~~l~~~~GV~~~~vn~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 197 (765)
+..|.| ||+|++|+.+|+++|++++|| ++++|+.++++.|.++ .++++|.++|+++||++.+.+
T Consensus 3 ~~~~~v-gm~C~~C~~~i~~~l~~~~gV-~v~v~~~~~~~~v~~~---~~~~~i~~~i~~~Gy~~~~~~ 66 (68)
T 3iwl_A 3 KHEFSV-DMTCGGCAEAVSRVLNKLGGV-KYDIDLPNKKVCIESE---HSMDTLLATLKKTGKTVSYLG 66 (68)
T ss_dssp EEEEEE-CCCSHHHHHHHHHHHHHHCSE-EEEEETTTTEEEEEES---SCHHHHHHHHHTTCSCEEEEE
T ss_pred eEEEEE-CcCcHHHHHHHHHHHHcCCCe-EEEEEcCCCEEEEEec---CCHHHHHHHHHHcCCceEecC
Confidence 567999 999999999999999999999 9999999999999973 578999999999999998754
No 30
>1osd_A MERP, hypothetical protein MERP; mercury resistance, metal binding protein, perisplasm, structural genomics; 2.00A {Cupriavidus metallidurans} SCOP: d.58.17.1 PDB: 1afi_A 1afj_A 2hqi_A
Probab=99.05 E-value=4.4e-10 Score=90.50 Aligned_cols=68 Identities=28% Similarity=0.470 Sum_probs=63.3
Q ss_pred eeceeecccccchhhHHHHHhhhcCCCCeeeEEeeeccCeEEEEeCCCCCCHHHHHHHHHhcCCceeE
Q 004259 128 IVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASF 195 (765)
Q Consensus 128 ~~~~~~i~gm~C~~C~~~Ie~~l~~~~GV~~~~vn~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~ 195 (765)
.+..+.|+||+|++|+.+|++.|++++||.++++|+.++++.+.|++...+.++|.+.++++||.+.+
T Consensus 3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~ 70 (72)
T 1osd_A 3 QTVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKATADAGYPSSV 70 (72)
T ss_dssp EEEEEECTTCCSTTHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTCCHHHHHHHHHHTTCCCEE
T ss_pred eEEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHhcCCCeEe
Confidence 34679999999999999999999999999999999999999999998878899999999999998764
No 31
>4a4j_A Pacszia, cation-transporting ATPase PACS; hydrolase, copper homeostasis, zinc homeostasis, ATX1, metal-transporting atpases; 1.25A {Synechocystis} PDB: 4a48_A 2gcf_A 2xmw_A
Probab=99.04 E-value=6e-10 Score=89.28 Aligned_cols=67 Identities=27% Similarity=0.542 Sum_probs=61.6
Q ss_pred eEEEEEeCCCCChhhHHHHHHhhhCCCCeeEEEEEeccCEEEEEECCCCCCHHHHHHHhHhcCcchhh
Q 004259 46 RRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEI 113 (765)
Q Consensus 46 ~~~~~~i~gm~C~~C~~~Ie~~l~~~~Gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~ 113 (765)
++++|.|+||+|++|+++|+++|++++||.++.+|+.++++.+.+ +...+++++.+++++.||++.+
T Consensus 2 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~-~~~~~~~~i~~~i~~~Gy~~~~ 68 (69)
T 4a4j_A 2 QTINLQLEGMDCTSCASSIERAIAKVPGVQSCQVNFALEQAVVSY-HGETTPQILTDAVERAGYHARV 68 (69)
T ss_dssp EEEEEEEESCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEE-CTTCCHHHHHHHHHHTTCEEEE
T ss_pred CEEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEE-CCCCCHHHHHHHHHHcCCceEe
Confidence 357899999999999999999999999999999999999999999 5668899999999999998643
No 32
>2l3m_A Copper-ION-binding protein; structural genomics, center for structural genomics of infec diseases, csgid, metal binding protein; NMR {Bacillus anthracis}
Probab=99.04 E-value=4.5e-10 Score=90.22 Aligned_cols=67 Identities=34% Similarity=0.595 Sum_probs=62.7
Q ss_pred ceeceeecccccchhhHHHHHhhhcCCCCeeeEEeeeccCeEEEEeCCCCCCHHHHHHHHHhcCCce
Q 004259 127 TIVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEA 193 (765)
Q Consensus 127 ~~~~~~~i~gm~C~~C~~~Ie~~l~~~~GV~~~~vn~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~ 193 (765)
+.+..+.|+||+|++|+..|++.|++++||.++.+|+.++++.+.|++...+.++|.+.++++||.+
T Consensus 4 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~ 70 (71)
T 2l3m_A 4 MEQLTLQVEGMSCGHCVNAIESSVKELNGVEQVKVQLAEGTVEVTIDSSVVTLKDIVAVIEDQGYDV 70 (71)
T ss_dssp EEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTSCHHHHHHHHHHTTCEE
T ss_pred cEEEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCC
Confidence 4566899999999999999999999999999999999999999999988788999999999999975
No 33
>1y3j_A Copper-transporting ATPase 1; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta structure, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1y3k_A
Probab=99.04 E-value=4.3e-10 Score=92.15 Aligned_cols=70 Identities=37% Similarity=0.588 Sum_probs=64.7
Q ss_pred ceeceeecccccchhhHHHHHhhhcCCCCeeeEEeeeccCeEEEEeCCCCCCHHHHHHHHHhcCCceeEe
Q 004259 127 TIVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASFV 196 (765)
Q Consensus 127 ~~~~~~~i~gm~C~~C~~~Ie~~l~~~~GV~~~~vn~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~ 196 (765)
+++..+.|+||+|++|+.+|++.|.+++||.++++|+.++++.+.|++...+.++|.+.++++||.+...
T Consensus 2 m~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~ 71 (77)
T 1y3j_A 2 SSKCYIQVTGMTCASCVANIERNLRREEGIYSILVALMAGKAEVRYNPAVIQPPMIAEFIRELGFGATVI 71 (77)
T ss_dssp CEEEEEEESCGGGCSHHHHHHHHHTTSSSEEECCCBTTTTBEEEEECTTTSCHHHHHHHHHHHTSCEEEE
T ss_pred CEEEEEEECCeeCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEEC
Confidence 4566899999999999999999999999999999999999999999988788899999999999998654
No 34
>3cjk_B Copper-transporting ATPase 1; HAH1, ATP7B, menkes disease, metal homeostasis, chaperone, ION transport, metal- binding, alternative splicing; 1.80A {Homo sapiens} PDB: 2k1r_A
Probab=99.03 E-value=8e-10 Score=89.93 Aligned_cols=69 Identities=29% Similarity=0.548 Sum_probs=63.7
Q ss_pred eceeecccccchhhHHHHHhhhcCCCCeeeEEeeeccCeEEEEeCCCCCCHHHHHHHHHhcCCceeEee
Q 004259 129 VGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASFVQ 197 (765)
Q Consensus 129 ~~~~~i~gm~C~~C~~~Ie~~l~~~~GV~~~~vn~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 197 (765)
+..+.|+||+|++|+.+|++.|++++||.++.+|+.++++.+.|++...+.++|.+.++++||.+.+.+
T Consensus 3 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 71 (75)
T 3cjk_B 3 SVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDAVIHN 71 (75)
T ss_dssp EEEEEECCCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHTTCCEEEEE
T ss_pred EEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEeec
Confidence 357899999999999999999999999999999999999999999987889999999999999987643
No 35
>1kvi_A Copper-transporting ATPase 1; menkes, Cu-protein, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1kvj_A
Probab=99.02 E-value=6.3e-10 Score=91.62 Aligned_cols=69 Identities=29% Similarity=0.540 Sum_probs=64.4
Q ss_pred ceeceeecccccchhhHHHHHhhhcCCCCeeeEEeeeccCeEEEEeCCCCCCHHHHHHHHHhcCCceeE
Q 004259 127 TIVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASF 195 (765)
Q Consensus 127 ~~~~~~~i~gm~C~~C~~~Ie~~l~~~~GV~~~~vn~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~ 195 (765)
..+..+.|+||+|++|+.+|+++|++++||.++++|+.++++.+.|++...+.+++.+.++++||.+.+
T Consensus 7 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~ 75 (79)
T 1kvi_A 7 VNSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDAVI 75 (79)
T ss_dssp CEEEEEEECCCCSTTTHHHHHHHHHHSSSCCCEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHCCCEEE
T ss_pred cEEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCCCCHHHHHHHHHHCCCceEe
Confidence 456789999999999999999999999999999999999999999998878889999999999998765
No 36
>2g9o_A Copper-transporting ATPase 1; menkes disease, solution structure, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} PDB: 2ga7_A
Probab=99.01 E-value=6.4e-10 Score=94.45 Aligned_cols=71 Identities=27% Similarity=0.493 Sum_probs=64.8
Q ss_pred eeceeecccccchhhHHHHHhhhcCCCCeeeEEeeeccCeEEEEeCCCCCCHHHHHHHHHhc---CCceeEeec
Q 004259 128 IVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDA---GFEASFVQS 198 (765)
Q Consensus 128 ~~~~~~i~gm~C~~C~~~Ie~~l~~~~GV~~~~vn~~~~~~~v~~~~~~~~~~~i~~~i~~~---Gy~~~~~~~ 198 (765)
++..|.|+||+|++|+.+|+++|++++||.++++|+.++++.|.|++..++.++|.++++++ ||++.+..+
T Consensus 3 ~~~~l~v~Gm~C~~C~~~Ie~~L~~~~GV~~v~v~l~~~~~~V~~~~~~~~~~~i~~~i~~~g~Ggy~~~~~~~ 76 (90)
T 2g9o_A 3 STATFIIDGMHCKSCVSNIESTLSALQYVSSIVVSLENRSAIVVYNASSVTPESLRKAIEAVSPGLYRVSITSE 76 (90)
T ss_dssp EEEEEEEESCCHHHHHHHHHHHHTTCTTEEEEEEETTTTEEEEEECCSSCCTHHHHHHHHTTSTTTCEEECCCC
T ss_pred cEEEEEECCcCCHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCCCCCHHHHHHHHHhccCCCeEEEEeCC
Confidence 35679999999999999999999999999999999999999999998878889999999999 598876544
No 37
>1cpz_A Protein (COPZ); copper chaperone, metal transport, gene regulation; NMR {Enterococcus hirae} SCOP: d.58.17.1
Probab=99.01 E-value=8.4e-10 Score=87.63 Aligned_cols=65 Identities=28% Similarity=0.624 Sum_probs=61.1
Q ss_pred eeecccccchhhHHHHHhhhcCCCCeeeEEeeeccCeEEEEeCCCCCCHHHHHHHHHhcCCceeE
Q 004259 131 QYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASF 195 (765)
Q Consensus 131 ~~~i~gm~C~~C~~~Ie~~l~~~~GV~~~~vn~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~ 195 (765)
.+.|+||+|++|+..|++.|++++||.++++|+.++++.+.|++...+.+++.+.++++||++..
T Consensus 3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~ 67 (68)
T 1cpz_A 3 EFSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQATEICQAINELGYQAEV 67 (68)
T ss_dssp EEEESCCCSSSHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHTTSSCEEE
T ss_pred EEEECCeeCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCccc
Confidence 58899999999999999999999999999999999999999998878899999999999998753
No 38
>1aw0_A Menkes copper-transporting ATPase; copper-binding domain, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 2aw0_A
Probab=99.00 E-value=6.9e-10 Score=89.31 Aligned_cols=67 Identities=48% Similarity=0.814 Sum_probs=62.6
Q ss_pred eceeecccccchhhHHHHHhhhcCCCCeeeEEeeeccCeEEEEeCCCCCCHHHHHHHHHhcCCceeE
Q 004259 129 VGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASF 195 (765)
Q Consensus 129 ~~~~~i~gm~C~~C~~~Ie~~l~~~~GV~~~~vn~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~ 195 (765)
+..+.|+||+|++|+.+|++.|++++||.++.+|+.++++.+.|++...+.+++.+.++++||.+.+
T Consensus 4 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~ 70 (72)
T 1aw0_A 4 ETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIEDMGFDATL 70 (72)
T ss_dssp EEEEEEECCCHHHHHHHHHHHHHTSTTCCCEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCEEEE
T ss_pred EEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCcCCHHHHHHHHHHCCCCcEe
Confidence 4579999999999999999999999999999999999999999998878899999999999998754
No 39
>2xmw_A PACS-N, cation-transporting ATPase PACS; hydrolase, Cu(I)-binding, trafficking; 1.80A {Synechocystis SP} PDB: 2gcf_A
Probab=99.00 E-value=8.3e-10 Score=88.50 Aligned_cols=66 Identities=30% Similarity=0.545 Sum_probs=59.3
Q ss_pred eceeecccccchhhHHHHHhhhcCCCCeeeEEeeeccCeEEEEeCCCCCCHHHHHHHHHhcCCceeE
Q 004259 129 VGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASF 195 (765)
Q Consensus 129 ~~~~~i~gm~C~~C~~~Ie~~l~~~~GV~~~~vn~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~ 195 (765)
+..+.|+||+|++|+..|++.|++++||.++.+|+.++++.+.|++. .+.+++.+.++++||.+.+
T Consensus 4 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~-~~~~~i~~~i~~~G~~~~~ 69 (71)
T 2xmw_A 4 TINLQLEGMRCAACASSIERAIAKVPGVQSCQVNFALEQAVVSYHGE-TTPQILTDAVERAGYHARV 69 (71)
T ss_dssp EEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEC----CHHHHHHHHHHHTCEEEE
T ss_pred EEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCC-CCHHHHHHHHHHcCCCcee
Confidence 45799999999999999999999999999999999999999999976 7889999999999998764
No 40
>1q8l_A Copper-transporting ATPase 1; metal binding protein; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1s6o_A 1s6u_A
Probab=99.00 E-value=8.7e-10 Score=92.19 Aligned_cols=70 Identities=33% Similarity=0.627 Sum_probs=64.9
Q ss_pred eeceeecccccchhhHHHHHhhhcCCCCeeeEEeeeccCeEEEEeCCCCCCHHHHHHHHHhcCCceeEee
Q 004259 128 IVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASFVQ 197 (765)
Q Consensus 128 ~~~~~~i~gm~C~~C~~~Ie~~l~~~~GV~~~~vn~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 197 (765)
.+..|.|+||+|++|+.+|++.|++++||.++++|+.++++.|.|++...+.++|.+.++++||.+.+..
T Consensus 9 ~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 78 (84)
T 1q8l_A 9 VVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVEEMKKQIEAMGFPAFVKK 78 (84)
T ss_dssp EEEEEEECCTTTCSSCHHHHHHHHTCTTEEEEEECSTTTEEEEEECTTTCCHHHHHHHHHHTTCCEECSC
T ss_pred eEEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEecC
Confidence 4678999999999999999999999999999999999999999999887889999999999999987543
No 41
>3fry_A Probable copper-exporting P-type ATPase A; transport protein, metal binding domain, domain SWAP, ATP-BI cell membrane, copper transport; HET: CIT; 2.00A {Archaeoglobus fulgidus}
Probab=98.99 E-value=4.5e-10 Score=91.27 Aligned_cols=67 Identities=24% Similarity=0.419 Sum_probs=61.5
Q ss_pred CCceEEEEEeCCCCChhhHHHHHHhhhCCCCeeEEEEEeccCEEEEEECCCCCCHHHHHHHhHhcCcchhhh
Q 004259 43 DGMRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEIL 114 (765)
Q Consensus 43 ~~~~~~~~~i~gm~C~~C~~~Ie~~l~~~~Gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~ 114 (765)
+.|++.+|.|+||+|++|+++|+++|++ +||..+.+|+.++++.+.++ +++++.+++++.||.+.+.
T Consensus 2 ~~m~~~~~~v~gm~C~~C~~~ie~~l~~-~gv~~~~v~~~~~~~~v~~~----~~~~i~~~i~~~Gy~~~~~ 68 (73)
T 3fry_A 2 DSVEKIVLELSGLSCHHCVARVKKALEE-AGAKVEKVDLNEAVVAGNKE----DVDKYIKAVEAAGYQAKLR 68 (73)
T ss_dssp CCCEEEEEEEESSBCGGGHHHHHHHHHH-TTCEEEEECSSEEEEEEEGG----GHHHHHHHHHHTTCEEEEC
T ss_pred CccEEEEEEECCCCCHHHHHHHHHHhcc-CCcEEEEEEccCCEEEEEEC----CHHHHHHHHHHcCCceEec
Confidence 4678899999999999999999999999 99999999999999999876 6889999999999987653
No 42
>2kt2_A Mercuric reductase; nmera, MERA, HMA domain, mercuric resist metal-binding, oxidoreductase; NMR {Pseudomonas aeruginosa} PDB: 2kt3_A
Probab=98.98 E-value=8.4e-10 Score=88.10 Aligned_cols=64 Identities=30% Similarity=0.598 Sum_probs=60.2
Q ss_pred eeecccccchhhHHHHHhhhcCCCCeeeEEeeeccCeEEEEeCCCCCCHHHHHHHHHhcCCceeE
Q 004259 131 QYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASF 195 (765)
Q Consensus 131 ~~~i~gm~C~~C~~~Ie~~l~~~~GV~~~~vn~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~ 195 (765)
.+.|+||+|++|+.+|+++|++++||.++++|+.++++.+.|++. .+.++|.+.++++||.+.+
T Consensus 3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~-~~~~~i~~~i~~~Gy~~~~ 66 (69)
T 2kt2_A 3 HLKITGMTCDSCAAHVKEALEKVPGVQSALVSYPKGTAQLAIVPG-TSPDALTAAVAGLGYKATL 66 (69)
T ss_dssp CEEEESSCSTHHHHHHHHHHHHSTTEEEEEEETTTTEEEEEECTT-SCHHHHHHHHHTTTSEEEC
T ss_pred EEEECCcccHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCC-CCHHHHHHHHHHCCCceEe
Confidence 588999999999999999999999999999999999999999986 6889999999999998764
No 43
>1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, Met transport; NMR {Helicobacter pylori}
Probab=98.98 E-value=9.9e-10 Score=86.63 Aligned_cols=64 Identities=28% Similarity=0.482 Sum_probs=59.3
Q ss_pred eceeecccccchhhHHHHHhhhcCCCCeeeEEeeeccCeEEEEeCCCCCCHHHHHHHHHhcCCce
Q 004259 129 VGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEA 193 (765)
Q Consensus 129 ~~~~~i~gm~C~~C~~~Ie~~l~~~~GV~~~~vn~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~ 193 (765)
+..+.|+||+|++|+.+|++.|++++||.++++|+.++++.+.|++.. +.++|.+.++++||.+
T Consensus 2 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~-~~~~i~~~i~~~G~~~ 65 (66)
T 1yg0_A 2 KATFQVPSITCNHCVDKIEKFVGEIEGVSFIDVSVEKKSVVVEFDAPA-TQDLIKEALLDAGQEV 65 (66)
T ss_dssp EEEECCTTCSCSHHHHHHHHHHTTSSSEEEEEEETTTTEEEEEECTTC-CHHHHHHHHHHHTCCC
T ss_pred eEEEEECCcccHHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEECCCC-CHHHHHHHHHHcCCCc
Confidence 346899999999999999999999999999999999999999999864 8899999999999975
No 44
>2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} SCOP: d.58.17.1 PDB: 3i9z_A 1k0v_A 1p8g_A
Probab=98.97 E-value=1.4e-09 Score=86.23 Aligned_cols=65 Identities=35% Similarity=0.607 Sum_probs=61.1
Q ss_pred eceeecccccchhhHHHHHhhhcCCCCeeeEEeeeccCeEEEEeCCCCCCHHHHHHHHHhcCCce
Q 004259 129 VGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEA 193 (765)
Q Consensus 129 ~~~~~i~gm~C~~C~~~Ie~~l~~~~GV~~~~vn~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~ 193 (765)
+..+.|+||+|++|+..|++.|++++||.++.+|+.++++.+.|++...+.+++.+.++++||.+
T Consensus 3 ~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~ 67 (69)
T 2qif_A 3 QKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAIEDQGYDV 67 (69)
T ss_dssp EEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHTTCEE
T ss_pred EEEEEECCcccHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCc
Confidence 35699999999999999999999999999999999999999999988788999999999999975
No 45
>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} SCOP: d.58.17.1 PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A
Probab=98.96 E-value=1.1e-09 Score=87.59 Aligned_cols=65 Identities=25% Similarity=0.407 Sum_probs=58.5
Q ss_pred ceEEEEEeCCCCChhhHHHHHHhhhCCCCeeEEEEEeccCEEEEEECCCCCCHHHHHHHhHhcCcchhhh
Q 004259 45 MRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEIL 114 (765)
Q Consensus 45 ~~~~~~~i~gm~C~~C~~~Ie~~l~~~~Gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~ 114 (765)
|++.+|.| ||+|++|+++|+++|++++|| ++.+|+.++++.+.++ .+++++.+++++.||.+.+.
T Consensus 1 m~~~~~~v-gm~C~~C~~~i~~~l~~~~gV-~v~v~~~~~~~~v~~~---~~~~~i~~~i~~~Gy~~~~~ 65 (68)
T 3iwl_A 1 MPKHEFSV-DMTCGGCAEAVSRVLNKLGGV-KYDIDLPNKKVCIESE---HSMDTLLATLKKTGKTVSYL 65 (68)
T ss_dssp -CEEEEEE-CCCSHHHHHHHHHHHHHHCSE-EEEEETTTTEEEEEES---SCHHHHHHHHHTTCSCEEEE
T ss_pred CceEEEEE-CcCcHHHHHHHHHHHHcCCCe-EEEEEcCCCEEEEEec---CCHHHHHHHHHHcCCceEec
Confidence 45789999 999999999999999999999 9999999999999863 56899999999999987653
No 46
>2ldi_A Zinc-transporting ATPase; metal homeostasis, metallochaperones, hydrolase; NMR {Synechocystis SP}
Probab=98.96 E-value=1.5e-09 Score=86.77 Aligned_cols=67 Identities=39% Similarity=0.603 Sum_probs=62.0
Q ss_pred eeceeecccccchhhHHHHHhhhcCCCCeeeEEeeeccCeEEEEeCCCCCCHHHHHHHHHhcCCcee
Q 004259 128 IVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEAS 194 (765)
Q Consensus 128 ~~~~~~i~gm~C~~C~~~Ie~~l~~~~GV~~~~vn~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~ 194 (765)
++..+.|+||+|++|+.+|++.|++++||.++.+|+.++++.+.|++...+.+++.+.++++||.+.
T Consensus 3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~ 69 (71)
T 2ldi_A 3 KTQQMQVGGMRCAACASSIERALERLKGVAEASVTVATGRLTVTYDPKQVSEITIQERIAALGYTLA 69 (71)
T ss_dssp EEEEEEEETCTTSGGGHHHHTGGGGCSSEEEEEEETTTTEEEEEECTTTCCTHHHHHHHHTTTCEEE
T ss_pred EEEEEEECCccCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCcc
Confidence 3457999999999999999999999999999999999999999999877888999999999999764
No 47
>1mwy_A ZNTA; open-faced beta-sandwich fold, beta-alpha-beta-BETA-alpha- beta, hydrolase; NMR {Escherichia coli} SCOP: d.58.17.1 PDB: 1mwz_A
Probab=98.95 E-value=1.9e-09 Score=87.25 Aligned_cols=66 Identities=30% Similarity=0.494 Sum_probs=60.6
Q ss_pred eeceeecccccchhhHHHHHhhhcCCCCeeeEEeeeccCeEEEEeCCCCCCHHHHHHHHHhcCCceeE
Q 004259 128 IVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASF 195 (765)
Q Consensus 128 ~~~~~~i~gm~C~~C~~~Ie~~l~~~~GV~~~~vn~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~ 195 (765)
++..|.|+||+|++|+.+|++.|++++||.++.+|+.++++.|.|++. ..++|.+.++++||.+..
T Consensus 3 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gV~~~~v~~~~~~~~v~~~~~--~~~~i~~~i~~~Gy~~~~ 68 (73)
T 1mwy_A 3 TRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADND--IRAQVESALQKAGYSLRD 68 (73)
T ss_dssp EEEEEEEESCCSTTHHHHHHHHHHTSSSEEEEEEETTTTEEEEEESSC--CHHHHHHHHHHHTCEEEE
T ss_pred eEEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCC--CHHHHHHHHHHcCCcccc
Confidence 456899999999999999999999999999999999999999999984 378899999999998764
No 48
>1opz_A Potential copper-transporting ATPase; mutation, folding, abbab fold, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 1oq3_A 1oq6_A
Probab=98.95 E-value=2e-09 Score=87.45 Aligned_cols=69 Identities=36% Similarity=0.548 Sum_probs=63.6
Q ss_pred ceeceeecccccchhhHHHHHhhhcCCCCeeeEEeeeccCeEEEEeCCCCCCHHHHHHHHHhcCCceeE
Q 004259 127 TIVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASF 195 (765)
Q Consensus 127 ~~~~~~~i~gm~C~~C~~~Ie~~l~~~~GV~~~~vn~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~ 195 (765)
..+..+.|+||+|++|+..|++.|.+++||.++.+|+.++++.+.|++...+.+++.+.++++||.+..
T Consensus 5 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~ 73 (76)
T 1opz_A 5 QKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLGYHVVI 73 (76)
T ss_dssp CEEEEEEEESCCSTTHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHTCEEEC
T ss_pred ceEEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHCCCceec
Confidence 345679999999999999999999999999999999999999999998878899999999999998753
No 49
>1fvq_A Copper-transporting ATPase; APO-CCC2A, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1fvs_A 2ggp_B
Probab=98.95 E-value=1.8e-09 Score=86.86 Aligned_cols=67 Identities=36% Similarity=0.662 Sum_probs=62.1
Q ss_pred eceeecccccchhhHHHHHhhhcCCCCeeeEEeeeccCeEEEEeCCCCCCHHHHHHHHHhcCCceeEe
Q 004259 129 VGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASFV 196 (765)
Q Consensus 129 ~~~~~i~gm~C~~C~~~Ie~~l~~~~GV~~~~vn~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~ 196 (765)
+..+.|+||+|++|+.+|++.|++++||.++++|+.++++.+.|+ ...+.+++.+.++++||.+.+.
T Consensus 3 ~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~-~~~~~~~i~~~i~~~G~~~~~~ 69 (72)
T 1fvq_A 3 EVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYD-NEVTADSIKEIIEDCGFDCEIL 69 (72)
T ss_dssp EEEEEECSCCSHHHHHHHHHHHHTSSSEEEECCBTTTTEEEEEEC-TTSCHHHHHHHHHHHTCCEEEE
T ss_pred EEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEEC-CCCCHHHHHHHHHHCCCceEEc
Confidence 457999999999999999999999999999999999999999999 6678899999999999988754
No 50
>2l3m_A Copper-ION-binding protein; structural genomics, center for structural genomics of infec diseases, csgid, metal binding protein; NMR {Bacillus anthracis}
Probab=98.93 E-value=3.5e-09 Score=84.87 Aligned_cols=68 Identities=32% Similarity=0.656 Sum_probs=62.8
Q ss_pred CceEEEEEeCCCCChhhHHHHHHhhhCCCCeeEEEEEeccCEEEEEECCCCCCHHHHHHHhHhcCcch
Q 004259 44 GMRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEA 111 (765)
Q Consensus 44 ~~~~~~~~i~gm~C~~C~~~Ie~~l~~~~Gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~ 111 (765)
.|.+..|.|+||+|++|+++|++++++++||..+.+++.++++.+.+++...+.+++.+.+++.||.+
T Consensus 3 ~~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~ 70 (71)
T 2l3m_A 3 AMEQLTLQVEGMSCGHCVNAIESSVKELNGVEQVKVQLAEGTVEVTIDSSVVTLKDIVAVIEDQGYDV 70 (71)
T ss_dssp SEEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTSCHHHHHHHHHHTTCEE
T ss_pred CcEEEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCC
Confidence 46778999999999999999999999999999999999999999999877778889999999999964
No 51
>1yjr_A Copper-transporting ATPase 1; metallochaperone, protein-protein interaction, copper(I), metal homeostasis, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1yjt_A 1yju_A 1yjv_A
Probab=98.92 E-value=1.7e-09 Score=87.83 Aligned_cols=67 Identities=42% Similarity=0.704 Sum_probs=62.2
Q ss_pred eceeecccccchhhHHHHHhhhcCCCCeeeEEeeeccCeEEEEeCCCCCCHHHHHHHHHhcCCceeE
Q 004259 129 VGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASF 195 (765)
Q Consensus 129 ~~~~~i~gm~C~~C~~~Ie~~l~~~~GV~~~~vn~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~ 195 (765)
+..|.|+||+|++|+.+|++.|++++||.++.+|+.++++.+.|++...+.+++.+.++++||.+..
T Consensus 5 ~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~ 71 (75)
T 1yjr_A 5 VLELVVRGMTCASCVHKIESSLTKHRGILYCSVALATNKAHIKYDPEIIGPRDIIHTIESLGFEPSL 71 (75)
T ss_dssp CEEEEEETCCTTTHHHHHHHHHTTSTTEEEEEEETTTTEEEEEECTTTTHHHHHHHHHHHHHCEEEE
T ss_pred EEEEEECCcccHHHHHHHHHHHHcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCcee
Confidence 4579999999999999999999999999999999999999999998777788999999999998754
No 52
>1jww_A Potential copper-transporting ATPase; beta-alpha-beta-BETA-alpha-beta, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 2voy_A 1kqk_A
Probab=98.90 E-value=2.5e-09 Score=88.05 Aligned_cols=69 Identities=35% Similarity=0.592 Sum_probs=63.7
Q ss_pred eeceeecccccchhhHHHHHhhhcCCCCeeeEEeeeccCeEEEEeCCCCCCHHHHHHHHHhcCCceeEe
Q 004259 128 IVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASFV 196 (765)
Q Consensus 128 ~~~~~~i~gm~C~~C~~~Ie~~l~~~~GV~~~~vn~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~ 196 (765)
++..|.|+||+|++|+..|++.|++++||.++.+|+.++++.+.|++...+.+++.+.++++||.+...
T Consensus 3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~ 71 (80)
T 1jww_A 3 EKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDKLGYKLKLK 71 (80)
T ss_dssp EEEEEEEESCCCHHHHHHHHHHHHTSTTEEECCCCSSSSEEEEEECTTTCCHHHHHHHHHHHTSEEEEC
T ss_pred eEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCeEEec
Confidence 345799999999999999999999999999999999999999999988788999999999999988653
No 53
>1osd_A MERP, hypothetical protein MERP; mercury resistance, metal binding protein, perisplasm, structural genomics; 2.00A {Cupriavidus metallidurans} SCOP: d.58.17.1 PDB: 1afi_A 1afj_A 2hqi_A
Probab=98.86 E-value=7e-09 Score=83.28 Aligned_cols=68 Identities=31% Similarity=0.558 Sum_probs=62.2
Q ss_pred ceEEEEEeCCCCChhhHHHHHHhhhCCCCeeEEEEEeccCEEEEEECCCCCCHHHHHHHhHhcCcchh
Q 004259 45 MRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAE 112 (765)
Q Consensus 45 ~~~~~~~i~gm~C~~C~~~Ie~~l~~~~Gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~ 112 (765)
+++..|.|+||+|++|+++|++++++++||.++.+|+.++++.+.+++...+.+++.+.+++.||.+.
T Consensus 2 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~ 69 (72)
T 1osd_A 2 TQTVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKATADAGYPSS 69 (72)
T ss_dssp EEEEEEECTTCCSTTHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTCCHHHHHHHHHHTTCCCE
T ss_pred ceEEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHhcCCCeE
Confidence 34678999999999999999999999999999999999999999998776788899999999999764
No 54
>2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A
Probab=98.86 E-value=3.6e-09 Score=83.73 Aligned_cols=62 Identities=29% Similarity=0.588 Sum_probs=56.9
Q ss_pred eeecccccchhhHHHHHhhhcCCCCeeeEEeeeccCeEEEEeCCCCCCHHHHHHHHHhcCCceeE
Q 004259 131 QYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASF 195 (765)
Q Consensus 131 ~~~i~gm~C~~C~~~Ie~~l~~~~GV~~~~vn~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~ 195 (765)
.|.|+||+|++|+.+|+++|++++||.++++|+.++++.+ + ...+.++|.+.++++||.+..
T Consensus 3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v--~-~~~~~~~i~~~i~~~Gy~~~~ 64 (66)
T 2roe_A 3 KLKVEGMTCNHCVMAVTKALKKVPGVEKVEVSLEKGEALV--E-GTADPKALVQAVEEEGYKAEV 64 (66)
T ss_dssp CEEEECCCSHHHHHHHHHHHHTSTTCCCEEECSSSCBEEE--C-SCCCHHHHHHHHHTTTCEEEE
T ss_pred EEEECCeEcHHHHHHHHHHHHcCCCeEEEEEEeCCCEEEE--C-CCCCHHHHHHHHHHcCCCcEe
Confidence 5889999999999999999999999999999999999999 3 447889999999999998754
No 55
>2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} SCOP: d.58.17.1 PDB: 3i9z_A 1k0v_A 1p8g_A
Probab=98.86 E-value=9.5e-09 Score=81.26 Aligned_cols=67 Identities=40% Similarity=0.666 Sum_probs=61.5
Q ss_pred ceEEEEEeCCCCChhhHHHHHHhhhCCCCeeEEEEEeccCEEEEEECCCCCCHHHHHHHhHhcCcch
Q 004259 45 MRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEA 111 (765)
Q Consensus 45 ~~~~~~~i~gm~C~~C~~~Ie~~l~~~~Gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~ 111 (765)
|++..+.|+||+|++|++++++++.+++||.++.+++.++++.+.+++...+.+++.+.+++.||.+
T Consensus 1 m~~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~ 67 (69)
T 2qif_A 1 MEQKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAIEDQGYDV 67 (69)
T ss_dssp CEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHTTCEE
T ss_pred CeEEEEEECCcccHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCc
Confidence 4567899999999999999999999999999999999999999999877778889999999999964
No 56
>1y3j_A Copper-transporting ATPase 1; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta structure, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1y3k_A
Probab=98.86 E-value=2.9e-09 Score=87.16 Aligned_cols=70 Identities=33% Similarity=0.580 Sum_probs=64.2
Q ss_pred CceEEEEEeCCCCChhhHHHHHHhhhCCCCeeEEEEEeccCEEEEEECCCCCCHHHHHHHhHhcCcchhh
Q 004259 44 GMRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEI 113 (765)
Q Consensus 44 ~~~~~~~~i~gm~C~~C~~~Ie~~l~~~~Gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~ 113 (765)
+|++..|.|+||+|++|+++|++++.+++||..+.+++.++++.+.+++...+.+++.+++++.||.+.+
T Consensus 1 ~m~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~ 70 (77)
T 1y3j_A 1 NSSKCYIQVTGMTCASCVANIERNLRREEGIYSILVALMAGKAEVRYNPAVIQPPMIAEFIRELGFGATV 70 (77)
T ss_dssp CCEEEEEEESCGGGCSHHHHHHHHHTTSSSEEECCCBTTTTBEEEEECTTTSCHHHHHHHHHHHTSCEEE
T ss_pred CCEEEEEEECCeeCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEE
Confidence 4778899999999999999999999999999999999999999999987767788999999999998644
No 57
>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A
Probab=98.85 E-value=7e-09 Score=84.06 Aligned_cols=65 Identities=26% Similarity=0.357 Sum_probs=59.1
Q ss_pred eeceeecccccchhhHHHHHhhhcCCC-CeeeEEeeeccCeEEEEeCCCCCCHHHHHHHHHhcCCceeEe
Q 004259 128 IVGQYTIGGMTCAACVNSVEGILRGLP-GVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASFV 196 (765)
Q Consensus 128 ~~~~~~i~gm~C~~C~~~Ie~~l~~~~-GV~~~~vn~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~ 196 (765)
.+..|.|+ |+|++|+.+|+++|++++ ||.++++|+.++++.|.++ .+.+++.+.++++||++...
T Consensus 5 ~~~~~~v~-m~C~~C~~~ie~~l~~~~~GV~~~~v~~~~~~~~v~~~---~~~~~i~~~i~~~Gy~~~~~ 70 (73)
T 1cc8_A 5 KHYQFNVV-MTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTT---LPYDFILEKIKKTGKEVRSG 70 (73)
T ss_dssp EEEEEEEC-CCSHHHHHHHHHHHHTTTTSEEEEEEETTTTEEEEEES---SCHHHHHHHHHTTSSCEEEE
T ss_pred eEEEEEEe-eECHHHHHHHHHHHHhCCCCceEEEEECCCCEEEEEEe---CCHHHHHHHHHHhCCCceee
Confidence 45679999 999999999999999999 9999999999999999973 57899999999999998653
No 58
>1kvi_A Copper-transporting ATPase 1; menkes, Cu-protein, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1kvj_A
Probab=98.84 E-value=6.4e-09 Score=85.44 Aligned_cols=70 Identities=33% Similarity=0.693 Sum_probs=63.8
Q ss_pred CceEEEEEeCCCCChhhHHHHHHhhhCCCCeeEEEEEeccCEEEEEECCCCCCHHHHHHHhHhcCcchhh
Q 004259 44 GMRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEI 113 (765)
Q Consensus 44 ~~~~~~~~i~gm~C~~C~~~Ie~~l~~~~Gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~ 113 (765)
++.+..|.|+||+|++|+++|++++++++||.++.+++.++++.+.+++...+.+++.+++++.||.+.+
T Consensus 6 ~~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~ 75 (79)
T 1kvi_A 6 GVNSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDAVI 75 (79)
T ss_dssp TCEEEEEEECCCCSTTTHHHHHHHHHHSSSCCCEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHCCCEEE
T ss_pred CcEEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCCCCHHHHHHHHHHCCCceEe
Confidence 4567889999999999999999999999999999999999999999987767788999999999998643
No 59
>1q8l_A Copper-transporting ATPase 1; metal binding protein; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1s6o_A 1s6u_A
Probab=98.84 E-value=7.6e-09 Score=86.36 Aligned_cols=70 Identities=34% Similarity=0.654 Sum_probs=63.7
Q ss_pred ceEEEEEeCCCCChhhHHHHHHhhhCCCCeeEEEEEeccCEEEEEECCCCCCHHHHHHHhHhcCcchhhh
Q 004259 45 MRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEIL 114 (765)
Q Consensus 45 ~~~~~~~i~gm~C~~C~~~Ie~~l~~~~Gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~ 114 (765)
..+..|.|+||+|++|+++|++++.+++||.++++|+.++++.+.+++...+.+++.+.+++.||.+.+.
T Consensus 8 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~ 77 (84)
T 1q8l_A 8 EVVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVEEMKKQIEAMGFPAFVK 77 (84)
T ss_dssp CEEEEEEECCTTTCSSCHHHHHHHHTCTTEEEEEECSTTTEEEEEECTTTCCHHHHHHHHHHTTCCEECS
T ss_pred ceEEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEec
Confidence 4568899999999999999999999999999999999999999999877678889999999999987543
No 60
>2g9o_A Copper-transporting ATPase 1; menkes disease, solution structure, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} PDB: 2ga7_A
Probab=98.83 E-value=9.1e-09 Score=87.24 Aligned_cols=70 Identities=27% Similarity=0.449 Sum_probs=62.9
Q ss_pred eEEEEEeCCCCChhhHHHHHHhhhCCCCeeEEEEEeccCEEEEEECCCCCCHHHHHHHhHhc---Ccchhhhc
Q 004259 46 RRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDA---GFEAEILA 115 (765)
Q Consensus 46 ~~~~~~i~gm~C~~C~~~Ie~~l~~~~Gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~---Gy~~~~~~ 115 (765)
++..|.|+||+|++|+++|+++|++++||.++.+|+.++++.+.+++...+.+++.++++++ ||.+.+..
T Consensus 3 ~~~~l~v~Gm~C~~C~~~Ie~~L~~~~GV~~v~v~l~~~~~~V~~~~~~~~~~~i~~~i~~~g~Ggy~~~~~~ 75 (90)
T 2g9o_A 3 STATFIIDGMHCKSCVSNIESTLSALQYVSSIVVSLENRSAIVVYNASSVTPESLRKAIEAVSPGLYRVSITS 75 (90)
T ss_dssp EEEEEEEESCCHHHHHHHHHHHHTTCTTEEEEEEETTTTEEEEEECCSSCCTHHHHHHHHTTSTTTCEEECCC
T ss_pred cEEEEEECCcCCHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCCCCCHHHHHHHHHhccCCCeEEEEeC
Confidence 45789999999999999999999999999999999999999999987767788999999999 59876543
No 61
>3cjk_B Copper-transporting ATPase 1; HAH1, ATP7B, menkes disease, metal homeostasis, chaperone, ION transport, metal- binding, alternative splicing; 1.80A {Homo sapiens} PDB: 2k1r_A
Probab=98.83 E-value=1.3e-08 Score=82.55 Aligned_cols=67 Identities=33% Similarity=0.681 Sum_probs=61.7
Q ss_pred EEEEEeCCCCChhhHHHHHHhhhCCCCeeEEEEEeccCEEEEEECCCCCCHHHHHHHhHhcCcchhh
Q 004259 47 RIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEI 113 (765)
Q Consensus 47 ~~~~~i~gm~C~~C~~~Ie~~l~~~~Gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~ 113 (765)
+..|.|+||+|++|+++|++++.+++||.++.+++.++++.+.+++...+.+++.+.+++.||.+.+
T Consensus 3 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~ 69 (75)
T 3cjk_B 3 SVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDAVI 69 (75)
T ss_dssp EEEEEECCCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHTTCCEEE
T ss_pred EEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEe
Confidence 4679999999999999999999999999999999999999999987767888999999999998654
No 62
>2kkh_A Putative heavy metal transporter; zinc transport, metal binding, metal selectivity, ferredoxin fold, ATP-binding, hydrolase; NMR {Arabidopsis thaliana}
Probab=98.82 E-value=9.5e-09 Score=88.03 Aligned_cols=71 Identities=30% Similarity=0.365 Sum_probs=65.1
Q ss_pred ceeceeecccccchhhHHHHHhhhcCCCCeeeEEeeeccCeEEEEeCCCCCCHHHHHHHHHhcCCceeEee
Q 004259 127 TIVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASFVQ 197 (765)
Q Consensus 127 ~~~~~~~i~gm~C~~C~~~Ie~~l~~~~GV~~~~vn~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 197 (765)
+.+..|.|+||+|++|+..|++.|.+++||..+.+|+.++++.+.|++..++.+.|.+.++++||.+.+..
T Consensus 15 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 85 (95)
T 2kkh_A 15 LQKSYFDVLGICCTSEVPIIENILKSLDGVKEYSVIVPSRTVIVVHDSLLISPFQIAKALNEARLEANVRV 85 (95)
T ss_dssp SEEEEEEETTCCTTTTHHHHHHHHHHSSSEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCCEEESC
T ss_pred eEEEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCceEEec
Confidence 45678999999999999999999999999999999999999999999877788999999999999887643
No 63
>1mwy_A ZNTA; open-faced beta-sandwich fold, beta-alpha-beta-BETA-alpha- beta, hydrolase; NMR {Escherichia coli} SCOP: d.58.17.1 PDB: 1mwz_A
Probab=98.82 E-value=1.2e-08 Score=82.42 Aligned_cols=67 Identities=33% Similarity=0.501 Sum_probs=60.8
Q ss_pred CceEEEEEeCCCCChhhHHHHHHhhhCCCCeeEEEEEeccCEEEEEECCCCCCHHHHHHHhHhcCcchh
Q 004259 44 GMRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAE 112 (765)
Q Consensus 44 ~~~~~~~~i~gm~C~~C~~~Ie~~l~~~~Gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~ 112 (765)
+|++..|.|+||+|++|+++|+++|++++||.++.+|+.++++.+.+++. ..+++.+++++.||.+.
T Consensus 1 ~m~~~~~~v~gm~C~~C~~~ie~~l~~~~gV~~~~v~~~~~~~~v~~~~~--~~~~i~~~i~~~Gy~~~ 67 (73)
T 1mwy_A 1 SGTRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADND--IRAQVESALQKAGYSLR 67 (73)
T ss_dssp CCEEEEEEEESCCSTTHHHHHHHHHHTSSSEEEEEEETTTTEEEEEESSC--CHHHHHHHHHHHTCEEE
T ss_pred CCeEEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCC--CHHHHHHHHHHcCCccc
Confidence 36788999999999999999999999999999999999999999998864 36788999999999864
No 64
>2kyz_A Heavy metal binding protein; structural genomics, PSI-biology, protein structure initiative, joint for structural genomics, JCSG; NMR {Thermotoga maritima}
Probab=98.82 E-value=2.7e-09 Score=84.79 Aligned_cols=61 Identities=20% Similarity=0.313 Sum_probs=56.4
Q ss_pred ceeecccccchhhHHHHHhhhcCCCCeeeEEeeeccCeEEEEeCCCCCCHHHHHHHHHhcCCceeE
Q 004259 130 GQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASF 195 (765)
Q Consensus 130 ~~~~i~gm~C~~C~~~Ie~~l~~~~GV~~~~vn~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~ 195 (765)
..+.|+||+|++|+.+|+++|+++ ||.++.+|+.++++.+.+++. +++.++++++||++..
T Consensus 3 ~~~~v~gm~C~~C~~~i~~~l~~~-gv~~~~v~~~~~~~~v~~~~~----~~i~~~i~~~Gy~~~~ 63 (67)
T 2kyz_A 3 YVLYVPDISCNHCKMRISKALEEL-GVKNYEVSVEEKKVVVETENL----DSVLKKLEEIDYPVES 63 (67)
T ss_dssp EEEECGGGGSHHHHHHHHHHHHHH-TCSEEEEETTTTEEEEECSCH----HHHHHHHHTTTCCCCB
T ss_pred EEEEECCcCcHHHHHHHHHHHHHc-CCeEEEEECCCCEEEEEECCH----HHHHHHHHHcCCceee
Confidence 468999999999999999999999 999999999999999999864 7899999999998754
No 65
>1aw0_A Menkes copper-transporting ATPase; copper-binding domain, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 2aw0_A
Probab=98.81 E-value=8.4e-09 Score=82.80 Aligned_cols=67 Identities=36% Similarity=0.676 Sum_probs=61.3
Q ss_pred eEEEEEeCCCCChhhHHHHHHhhhCCCCeeEEEEEeccCEEEEEECCCCCCHHHHHHHhHhcCcchh
Q 004259 46 RRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAE 112 (765)
Q Consensus 46 ~~~~~~i~gm~C~~C~~~Ie~~l~~~~Gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~ 112 (765)
++..|.|+||+|++|+++|++++++++||.++.+++.++++.+.+++...+.+++.+.+++.||.+.
T Consensus 3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~ 69 (72)
T 1aw0_A 3 QETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIEDMGFDAT 69 (72)
T ss_dssp EEEEEEEECCCHHHHHHHHHHHHHTSTTCCCEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCEEE
T ss_pred eEEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCcCCHHHHHHHHHHCCCCcE
Confidence 3568999999999999999999999999999999999999999998776778899999999999764
No 66
>1opz_A Potential copper-transporting ATPase; mutation, folding, abbab fold, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 1oq3_A 1oq6_A
Probab=98.81 E-value=1.6e-08 Score=81.93 Aligned_cols=69 Identities=33% Similarity=0.621 Sum_probs=63.4
Q ss_pred CceEEEEEeCCCCChhhHHHHHHhhhCCCCeeEEEEEeccCEEEEEECCCCCCHHHHHHHhHhcCcchh
Q 004259 44 GMRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAE 112 (765)
Q Consensus 44 ~~~~~~~~i~gm~C~~C~~~Ie~~l~~~~Gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~ 112 (765)
.+.+..+.|.||+|++|++++++++.+++||.++.+++.++++.+.+++...+.+++.+.+++.||.+.
T Consensus 4 ~~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~ 72 (76)
T 1opz_A 4 EQKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLGYHVV 72 (76)
T ss_dssp CCEEEEEEEESCCSTTHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHTCEEE
T ss_pred cceEEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHCCCcee
Confidence 467788999999999999999999999999999999999999999998776788899999999999764
No 67
>2xmw_A PACS-N, cation-transporting ATPase PACS; hydrolase, Cu(I)-binding, trafficking; 1.80A {Synechocystis SP} PDB: 2gcf_A
Probab=98.81 E-value=1.3e-08 Score=81.43 Aligned_cols=66 Identities=30% Similarity=0.575 Sum_probs=58.3
Q ss_pred eEEEEEeCCCCChhhHHHHHHhhhCCCCeeEEEEEeccCEEEEEECCCCCCHHHHHHHhHhcCcchh
Q 004259 46 RRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAE 112 (765)
Q Consensus 46 ~~~~~~i~gm~C~~C~~~Ie~~l~~~~Gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~ 112 (765)
.+..|.|+||+|++|+++|++++++++||.++.+|+.++++.+.+++. .+.+++.+++++.||.+.
T Consensus 3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~-~~~~~i~~~i~~~G~~~~ 68 (71)
T 2xmw_A 3 QTINLQLEGMRCAACASSIERAIAKVPGVQSCQVNFALEQAVVSYHGE-TTPQILTDAVERAGYHAR 68 (71)
T ss_dssp EEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEC----CHHHHHHHHHHHTCEEE
T ss_pred cEEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCC-CCHHHHHHHHHHcCCCce
Confidence 456899999999999999999999999999999999999999999865 778899999999999763
No 68
>1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, Met transport; NMR {Helicobacter pylori}
Probab=98.80 E-value=1.3e-08 Score=80.10 Aligned_cols=64 Identities=28% Similarity=0.444 Sum_probs=58.6
Q ss_pred EEEEEeCCCCChhhHHHHHHhhhCCCCeeEEEEEeccCEEEEEECCCCCCHHHHHHHhHhcCcch
Q 004259 47 RIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEA 111 (765)
Q Consensus 47 ~~~~~i~gm~C~~C~~~Ie~~l~~~~Gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~ 111 (765)
+..|.|+||+|++|++++++++++++||.++.+++.++++.+.+++.. +.+++.+++++.||.+
T Consensus 2 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~-~~~~i~~~i~~~G~~~ 65 (66)
T 1yg0_A 2 KATFQVPSITCNHCVDKIEKFVGEIEGVSFIDVSVEKKSVVVEFDAPA-TQDLIKEALLDAGQEV 65 (66)
T ss_dssp EEEECCTTCSCSHHHHHHHHHHTTSSSEEEEEEETTTTEEEEEECTTC-CHHHHHHHHHHHTCCC
T ss_pred eEEEEECCcccHHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEECCCC-CHHHHHHHHHHcCCCc
Confidence 467999999999999999999999999999999999999999988654 7888999999999964
No 69
>2xmm_A SSR2857 protein, ATX1; metal transport, copper homeostasis, chaperone, P-type atpas; 1.65A {Synechocystis SP} PDB: 2xmv_A 1sb6_A 2xmj_A 2xmk_A 2xmt_A 2xmu_A
Probab=98.79 E-value=5.9e-09 Score=81.51 Aligned_cols=61 Identities=21% Similarity=0.388 Sum_probs=56.2
Q ss_pred ceeecccccchhhHHHHHhhhcCCCCeeeEEeeeccCeEEEEeCCCCCCHHHHHHHHHhcCCce
Q 004259 130 GQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEA 193 (765)
Q Consensus 130 ~~~~i~gm~C~~C~~~Ie~~l~~~~GV~~~~vn~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~ 193 (765)
..+.|+||+|++|+.+|++.|++++||.++++|+.++++.+.+ ..+.+++.+.++++||.+
T Consensus 3 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~---~~~~~~i~~~i~~~G~~~ 63 (64)
T 2xmm_A 3 IQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITS---ALGEEQLRTAIASAGYEV 63 (64)
T ss_dssp EEEECTTCCSHHHHHHHHHHHHHHCTTCEEEECTTTCEEEEEC---SSCHHHHHHHHHHTTCCC
T ss_pred EEEEECCcCcHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEe---cCCHHHHHHHHHHcCCCC
Confidence 4689999999999999999999999999999999999999984 357899999999999975
No 70
>2k2p_A Uncharacterized protein ATU1203; putative metal-binding domain ATU1203, ontario centre for ST proteomics, structural genomics; NMR {Agrobacterium tumefaciens str}
Probab=98.79 E-value=4.8e-09 Score=87.89 Aligned_cols=64 Identities=19% Similarity=0.217 Sum_probs=58.3
Q ss_pred ceeceeecccccchhhHHHHHhhhcCCCCeeeEEeeeccCeEEEEeCCCCCCHHHHHHHHHhcCCce
Q 004259 127 TIVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEA 193 (765)
Q Consensus 127 ~~~~~~~i~gm~C~~C~~~Ie~~l~~~~GV~~~~vn~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~ 193 (765)
..+..|.|+||+|++|+.+|+++|++++||.++++|+.++++.|.++ .++++|.++|+++||++
T Consensus 21 ~~~~~l~V~Gm~C~~C~~~Ie~aL~~~~GV~~v~v~l~~~~~~V~~~---~~~~~i~~~i~~~Gy~~ 84 (85)
T 2k2p_A 21 GAGLSFHVEDMTCGHCAGVIKGAIEKTVPGAAVHADPASRTVVVGGV---SDAAHIAEIITAAGYTP 84 (85)
T ss_dssp -CEEEEECTTCCHHHHHHHHHHHHHHHSTTCEEEEETTTTEEEEESC---CCHHHHHHHHHHTTCCC
T ss_pred ccEEEEEECCCCCHHHHHHHHHHHhcCCCeeEEEEECCCCEEEEEec---CCHHHHHHHHHHcCCCC
Confidence 34568999999999999999999999999999999999999999964 57899999999999975
No 71
>1cpz_A Protein (COPZ); copper chaperone, metal transport, gene regulation; NMR {Enterococcus hirae} SCOP: d.58.17.1
Probab=98.78 E-value=1.6e-08 Score=79.97 Aligned_cols=64 Identities=38% Similarity=0.610 Sum_probs=59.3
Q ss_pred EEEeCCCCChhhHHHHHHhhhCCCCeeEEEEEeccCEEEEEECCCCCCHHHHHHHhHhcCcchh
Q 004259 49 QVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAE 112 (765)
Q Consensus 49 ~~~i~gm~C~~C~~~Ie~~l~~~~Gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~ 112 (765)
.+.|+||+|++|++++++++++++||.++.+++.++++.+.+++...+.+++.+.+++.||.+.
T Consensus 3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~ 66 (68)
T 1cpz_A 3 EFSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQATEICQAINELGYQAE 66 (68)
T ss_dssp EEEESCCCSSSHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHTTSSCEE
T ss_pred EEEECCeeCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCcc
Confidence 5889999999999999999999999999999999999999998776788899999999999753
No 72
>2ldi_A Zinc-transporting ATPase; metal homeostasis, metallochaperones, hydrolase; NMR {Synechocystis SP}
Probab=98.77 E-value=1.5e-08 Score=80.78 Aligned_cols=67 Identities=40% Similarity=0.670 Sum_probs=61.3
Q ss_pred ceEEEEEeCCCCChhhHHHHHHhhhCCCCeeEEEEEeccCEEEEEECCCCCCHHHHHHHhHhcCcch
Q 004259 45 MRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEA 111 (765)
Q Consensus 45 ~~~~~~~i~gm~C~~C~~~Ie~~l~~~~Gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~ 111 (765)
+++..+.|+||+|++|++++++++++++||..+.+++.++++.+.+++...+.+++.+.+++.||.+
T Consensus 2 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~ 68 (71)
T 2ldi_A 2 LKTQQMQVGGMRCAACASSIERALERLKGVAEASVTVATGRLTVTYDPKQVSEITIQERIAALGYTL 68 (71)
T ss_dssp CEEEEEEEETCTTSGGGHHHHTGGGGCSSEEEEEEETTTTEEEEEECTTTCCTHHHHHHHHTTTCEE
T ss_pred cEEEEEEECCccCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCc
Confidence 4567899999999999999999999999999999999999999999876677888999999999975
No 73
>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.74 E-value=4.3e-08 Score=84.47 Aligned_cols=68 Identities=24% Similarity=0.441 Sum_probs=61.5
Q ss_pred ceeceeecccccchhhHHHHHhhhcCCCCeeeEEeeeccCeEEEEeCCCCCCHHHHHHHHHhcCCceeEeec
Q 004259 127 TIVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASFVQS 198 (765)
Q Consensus 127 ~~~~~~~i~gm~C~~C~~~Ie~~l~~~~GV~~~~vn~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~ 198 (765)
..+..|.|+ |+|++|+.+|+++|++++||.++++|+.++++.|.++ .+.++|.++|+++||.+.+...
T Consensus 18 ~~~~~l~V~-m~C~~C~~~Ie~aL~~l~GV~~v~vdl~~~~~~V~~~---~~~~~i~~~i~~~Gy~~~~~~~ 85 (98)
T 2crl_A 18 LCTLEFAVQ-MTCQSCVDAVRKSLQGVAGVQDVEVHLEDQMVLVHTT---LPSQEVQALLEGTGRQAVLKGM 85 (98)
T ss_dssp CEEEEEEEC-CCSHHHHHHHHHTTTTCTTCCEEEEETTTTEEEEEES---SCHHHHHHHHHTTTSCEEEEES
T ss_pred ceEEEEEEe-eECHHHHHHHHHHHHcCCCceEEEEECCCCEEEEEEe---CCHHHHHHHHHHhCCceEEccC
Confidence 345689999 9999999999999999999999999999999999984 5789999999999999887554
No 74
>1fvq_A Copper-transporting ATPase; APO-CCC2A, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1fvs_A 2ggp_B
Probab=98.73 E-value=2.1e-08 Score=80.46 Aligned_cols=66 Identities=42% Similarity=0.813 Sum_probs=60.5
Q ss_pred EEEEEeCCCCChhhHHHHHHhhhCCCCeeEEEEEeccCEEEEEECCCCCCHHHHHHHhHhcCcchhh
Q 004259 47 RIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEI 113 (765)
Q Consensus 47 ~~~~~i~gm~C~~C~~~Ie~~l~~~~Gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~ 113 (765)
+..+.|+||+|++|++++++++.+++||.++.+++.++++.+.++ ...+.+++.+.+++.||.+.+
T Consensus 3 ~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~-~~~~~~~i~~~i~~~G~~~~~ 68 (72)
T 1fvq_A 3 EVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYD-NEVTADSIKEIIEDCGFDCEI 68 (72)
T ss_dssp EEEEEECSCCSHHHHHHHHHHHHTSSSEEEECCBTTTTEEEEEEC-TTSCHHHHHHHHHHHTCCEEE
T ss_pred EEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEEC-CCCCHHHHHHHHHHCCCceEE
Confidence 578999999999999999999999999999999999999999988 667788999999999998644
No 75
>1jww_A Potential copper-transporting ATPase; beta-alpha-beta-BETA-alpha-beta, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 2voy_A 1kqk_A
Probab=98.73 E-value=1.6e-08 Score=83.03 Aligned_cols=69 Identities=30% Similarity=0.619 Sum_probs=63.0
Q ss_pred ceEEEEEeCCCCChhhHHHHHHhhhCCCCeeEEEEEeccCEEEEEECCCCCCHHHHHHHhHhcCcchhh
Q 004259 45 MRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEI 113 (765)
Q Consensus 45 ~~~~~~~i~gm~C~~C~~~Ie~~l~~~~Gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~ 113 (765)
|++..|.|+||+|++|++++++++++++||..+.+|+.++++.+.+++...+.+++.+.+++.||.+..
T Consensus 2 m~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~ 70 (80)
T 1jww_A 2 TEKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDKLGYKLKL 70 (80)
T ss_dssp CEEEEEEEESCCCHHHHHHHHHHHHTSTTEEECCCCSSSSEEEEEECTTTCCHHHHHHHHHHHTSEEEE
T ss_pred ceEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCeEEe
Confidence 567889999999999999999999999999999999999999999987767788899999999998644
No 76
>2kt2_A Mercuric reductase; nmera, MERA, HMA domain, mercuric resist metal-binding, oxidoreductase; NMR {Pseudomonas aeruginosa} PDB: 2kt3_A
Probab=98.72 E-value=2.4e-08 Score=79.40 Aligned_cols=64 Identities=28% Similarity=0.552 Sum_probs=58.6
Q ss_pred EEEeCCCCChhhHHHHHHhhhCCCCeeEEEEEeccCEEEEEECCCCCCHHHHHHHhHhcCcchhh
Q 004259 49 QVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEI 113 (765)
Q Consensus 49 ~~~i~gm~C~~C~~~Ie~~l~~~~Gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~ 113 (765)
.|.|+||+|++|+++|++++++++||.++.+|+.++++.+.+++. .+.+++.+++++.||.+.+
T Consensus 3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~-~~~~~i~~~i~~~Gy~~~~ 66 (69)
T 2kt2_A 3 HLKITGMTCDSCAAHVKEALEKVPGVQSALVSYPKGTAQLAIVPG-TSPDALTAAVAGLGYKATL 66 (69)
T ss_dssp CEEEESSCSTHHHHHHHHHHHHSTTEEEEEEETTTTEEEEEECTT-SCHHHHHHHHHTTTSEEEC
T ss_pred EEEECCcccHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCC-CCHHHHHHHHHHCCCceEe
Confidence 578999999999999999999999999999999999999998875 5788999999999998643
No 77
>2kkh_A Putative heavy metal transporter; zinc transport, metal binding, metal selectivity, ferredoxin fold, ATP-binding, hydrolase; NMR {Arabidopsis thaliana}
Probab=98.71 E-value=5.1e-08 Score=83.41 Aligned_cols=72 Identities=26% Similarity=0.365 Sum_probs=65.0
Q ss_pred CCCceEEEEEeCCCCChhhHHHHHHhhhCCCCeeEEEEEeccCEEEEEECCCCCCHHHHHHHhHhcCcchhh
Q 004259 42 GDGMRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEI 113 (765)
Q Consensus 42 ~~~~~~~~~~i~gm~C~~C~~~Ie~~l~~~~Gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~ 113 (765)
...|.+..|.|.||+|++|+.+|++++.+++||..+.+++..+++.+.+++...+.+.+.+++++.||.+.+
T Consensus 12 ~~~~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~ 83 (95)
T 2kkh_A 12 VKKLQKSYFDVLGICCTSEVPIIENILKSLDGVKEYSVIVPSRTVIVVHDSLLISPFQIAKALNEARLEANV 83 (95)
T ss_dssp SSCSEEEEEEETTCCTTTTHHHHHHHHHHSSSEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCCEEE
T ss_pred ccceEEEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCceEE
Confidence 345778899999999999999999999999999999999999999999987666788899999999998654
No 78
>1yjr_A Copper-transporting ATPase 1; metallochaperone, protein-protein interaction, copper(I), metal homeostasis, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1yjt_A 1yju_A 1yjv_A
Probab=98.71 E-value=2.2e-08 Score=81.08 Aligned_cols=66 Identities=39% Similarity=0.718 Sum_probs=60.3
Q ss_pred EEEEEeCCCCChhhHHHHHHhhhCCCCeeEEEEEeccCEEEEEECCCCCCHHHHHHHhHhcCcchh
Q 004259 47 RIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAE 112 (765)
Q Consensus 47 ~~~~~i~gm~C~~C~~~Ie~~l~~~~Gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~ 112 (765)
+..|.|+||+|++|+++|++++.+++||.++.+++.++++.+.+++...+.+++.+++++.||.+.
T Consensus 5 ~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~ 70 (75)
T 1yjr_A 5 VLELVVRGMTCASCVHKIESSLTKHRGILYCSVALATNKAHIKYDPEIIGPRDIIHTIESLGFEPS 70 (75)
T ss_dssp CEEEEEETCCTTTHHHHHHHHHTTSTTEEEEEEETTTTEEEEEECTTTTHHHHHHHHHHHHHCEEE
T ss_pred EEEEEECCcccHHHHHHHHHHHHcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCce
Confidence 467999999999999999999999999999999999999999998766677889999999999764
No 79
>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A
Probab=98.71 E-value=4.7e-08 Score=79.05 Aligned_cols=65 Identities=29% Similarity=0.444 Sum_probs=58.8
Q ss_pred ceEEEEEeCCCCChhhHHHHHHhhhCCC-CeeEEEEEeccCEEEEEECCCCCCHHHHHHHhHhcCcchhh
Q 004259 45 MRRIQVGVTGMTCAACSNSVEGALMGLK-GVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEI 113 (765)
Q Consensus 45 ~~~~~~~i~gm~C~~C~~~Ie~~l~~~~-Gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~ 113 (765)
|.+..|.|+ |+|++|+++|+++|++++ ||.++.+|+.++++.+.++ .+.+++.+++++.||.+..
T Consensus 4 m~~~~~~v~-m~C~~C~~~ie~~l~~~~~GV~~~~v~~~~~~~~v~~~---~~~~~i~~~i~~~Gy~~~~ 69 (73)
T 1cc8_A 4 IKHYQFNVV-MTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTT---LPYDFILEKIKKTGKEVRS 69 (73)
T ss_dssp CEEEEEEEC-CCSHHHHHHHHHHHHTTTTSEEEEEEETTTTEEEEEES---SCHHHHHHHHHTTSSCEEE
T ss_pred ceEEEEEEe-eECHHHHHHHHHHHHhCCCCceEEEEECCCCEEEEEEe---CCHHHHHHHHHHhCCCcee
Confidence 567889999 999999999999999999 9999999999999999863 5688999999999998643
No 80
>2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A
Probab=98.62 E-value=2.9e-08 Score=78.39 Aligned_cols=61 Identities=34% Similarity=0.574 Sum_probs=55.3
Q ss_pred EEEeCCCCChhhHHHHHHhhhCCCCeeEEEEEeccCEEEEEECCCCCCHHHHHHHhHhcCcchh
Q 004259 49 QVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAE 112 (765)
Q Consensus 49 ~~~i~gm~C~~C~~~Ie~~l~~~~Gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~ 112 (765)
.|.|+||+|++|+++|++++++++||.++.+|+.++++.+ + ...+.+++.+++++.||.+.
T Consensus 3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v--~-~~~~~~~i~~~i~~~Gy~~~ 63 (66)
T 2roe_A 3 KLKVEGMTCNHCVMAVTKALKKVPGVEKVEVSLEKGEALV--E-GTADPKALVQAVEEEGYKAE 63 (66)
T ss_dssp CEEEECCCSHHHHHHHHHHHHTSTTCCCEEECSSSCBEEE--C-SCCCHHHHHHHHHTTTCEEE
T ss_pred EEEECCeEcHHHHHHHHHHHHcCCCeEEEEEEeCCCEEEE--C-CCCCHHHHHHHHHHcCCCcE
Confidence 5789999999999999999999999999999999999998 3 34678899999999999764
No 81
>2xmm_A SSR2857 protein, ATX1; metal transport, copper homeostasis, chaperone, P-type atpas; 1.65A {Synechocystis SP} PDB: 2xmv_A 1sb6_A 2xmj_A 2xmk_A 2xmt_A 2xmu_A
Probab=98.62 E-value=4.8e-08 Score=76.17 Aligned_cols=62 Identities=29% Similarity=0.508 Sum_probs=55.8
Q ss_pred EEEEEeCCCCChhhHHHHHHhhhCCCCeeEEEEEeccCEEEEEECCCCCCHHHHHHHhHhcCcch
Q 004259 47 RIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEA 111 (765)
Q Consensus 47 ~~~~~i~gm~C~~C~~~Ie~~l~~~~Gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~ 111 (765)
+..|.|+||+|++|++++++++++++||.++.+|+.++++.+.. ..+.+++.+++++.||.+
T Consensus 2 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~---~~~~~~i~~~i~~~G~~~ 63 (64)
T 2xmm_A 2 TIQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITS---ALGEEQLRTAIASAGYEV 63 (64)
T ss_dssp CEEEECTTCCSHHHHHHHHHHHHHHCTTCEEEECTTTCEEEEEC---SSCHHHHHHHHHHTTCCC
T ss_pred eEEEEECCcCcHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEe---cCCHHHHHHHHHHcCCCC
Confidence 46799999999999999999999999999999999999999873 356788999999999964
No 82
>2k2p_A Uncharacterized protein ATU1203; putative metal-binding domain ATU1203, ontario centre for ST proteomics, structural genomics; NMR {Agrobacterium tumefaciens str}
Probab=98.61 E-value=4.3e-08 Score=82.02 Aligned_cols=65 Identities=20% Similarity=0.224 Sum_probs=57.8
Q ss_pred CceEEEEEeCCCCChhhHHHHHHhhhCCCCeeEEEEEeccCEEEEEECCCCCCHHHHHHHhHhcCcch
Q 004259 44 GMRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEA 111 (765)
Q Consensus 44 ~~~~~~~~i~gm~C~~C~~~Ie~~l~~~~Gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~ 111 (765)
++.+..|.|+||+|++|+++|+++|++++||.++.+|+.++++.+.++ .+++++.++++++||.+
T Consensus 20 ~~~~~~l~V~Gm~C~~C~~~Ie~aL~~~~GV~~v~v~l~~~~~~V~~~---~~~~~i~~~i~~~Gy~~ 84 (85)
T 2k2p_A 20 QGAGLSFHVEDMTCGHCAGVIKGAIEKTVPGAAVHADPASRTVVVGGV---SDAAHIAEIITAAGYTP 84 (85)
T ss_dssp --CEEEEECTTCCHHHHHHHHHHHHHHHSTTCEEEEETTTTEEEEESC---CCHHHHHHHHHHTTCCC
T ss_pred cccEEEEEECCCCCHHHHHHHHHHHhcCCCeeEEEEECCCCEEEEEec---CCHHHHHHHHHHcCCCC
Confidence 466788999999999999999999999999999999999999999753 56889999999999974
No 83
>2kyz_A Heavy metal binding protein; structural genomics, PSI-biology, protein structure initiative, joint for structural genomics, JCSG; NMR {Thermotoga maritima}
Probab=98.61 E-value=3.3e-08 Score=78.38 Aligned_cols=61 Identities=23% Similarity=0.387 Sum_probs=55.3
Q ss_pred EEEEEeCCCCChhhHHHHHHhhhCCCCeeEEEEEeccCEEEEEECCCCCCHHHHHHHhHhcCcchh
Q 004259 47 RIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAE 112 (765)
Q Consensus 47 ~~~~~i~gm~C~~C~~~Ie~~l~~~~Gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~ 112 (765)
+..+.|+||+|++|+++|+++++++ ||..+.+|+.++++.+.+++. +++.+++++.||.+.
T Consensus 2 ~~~~~v~gm~C~~C~~~i~~~l~~~-gv~~~~v~~~~~~~~v~~~~~----~~i~~~i~~~Gy~~~ 62 (67)
T 2kyz_A 2 RYVLYVPDISCNHCKMRISKALEEL-GVKNYEVSVEEKKVVVETENL----DSVLKKLEEIDYPVE 62 (67)
T ss_dssp EEEEECGGGGSHHHHHHHHHHHHHH-TCSEEEEETTTTEEEEECSCH----HHHHHHHHTTTCCCC
T ss_pred eEEEEECCcCcHHHHHHHHHHHHHc-CCeEEEEECCCCEEEEEECCH----HHHHHHHHHcCCcee
Confidence 4679999999999999999999999 999999999999999987643 788899999999764
No 84
>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.57 E-value=2.6e-07 Score=79.47 Aligned_cols=67 Identities=24% Similarity=0.447 Sum_probs=60.2
Q ss_pred ceEEEEEeCCCCChhhHHHHHHhhhCCCCeeEEEEEeccCEEEEEECCCCCCHHHHHHHhHhcCcchhhhc
Q 004259 45 MRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEILA 115 (765)
Q Consensus 45 ~~~~~~~i~gm~C~~C~~~Ie~~l~~~~Gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 115 (765)
+.+..|.|+ |+|++|+++|+++|++++||.++.+|+.++++.+.++ .+.+++.+++++.||.+.+..
T Consensus 18 ~~~~~l~V~-m~C~~C~~~Ie~aL~~l~GV~~v~vdl~~~~~~V~~~---~~~~~i~~~i~~~Gy~~~~~~ 84 (98)
T 2crl_A 18 LCTLEFAVQ-MTCQSCVDAVRKSLQGVAGVQDVEVHLEDQMVLVHTT---LPSQEVQALLEGTGRQAVLKG 84 (98)
T ss_dssp CEEEEEEEC-CCSHHHHHHHHHTTTTCTTCCEEEEETTTTEEEEEES---SCHHHHHHHHHTTTSCEEEEE
T ss_pred ceEEEEEEe-eECHHHHHHHHHHHHcCCCceEEEEECCCCEEEEEEe---CCHHHHHHHHHHhCCceEEcc
Confidence 566789999 9999999999999999999999999999999999873 467899999999999876543
No 85
>2aj0_A Probable cadmium-transporting ATPase; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta, metal binding protein, hydrolase; NMR {Listeria monocytogenes} PDB: 2aj1_A
Probab=98.49 E-value=1.1e-07 Score=76.17 Aligned_cols=60 Identities=23% Similarity=0.445 Sum_probs=53.3
Q ss_pred eceeecccccchhhHHHHHhhhcCCCCeeeEEeeeccCeEEEEeCCCCCCHHHHHHHHHhcCCceeE
Q 004259 129 VGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASF 195 (765)
Q Consensus 129 ~~~~~i~gm~C~~C~~~Ie~~l~~~~GV~~~~vn~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~ 195 (765)
+..+.|+||+|++|+.+|++.|++++||.++++|+.++++.+.+++. .+.++++||.+.+
T Consensus 4 ~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~-------~~~i~~~Gy~~~~ 63 (71)
T 2aj0_A 4 KTVYRVDGLSCTNCAAKFERNVKEIEGVTEAIVNFGASKITVTGEAS-------IQQVEQAGAFEHL 63 (71)
T ss_dssp EEEEEEESCCCHHHHHHHHHHHHHSTTEEEEEECCSSEEEEEEESCC-------HHHHHHHHTTTTC
T ss_pred EEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEECCCCEEEEEecCc-------HHHHHHhCCCccc
Confidence 45799999999999999999999999999999999999999998762 3577899998654
No 86
>2aj0_A Probable cadmium-transporting ATPase; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta, metal binding protein, hydrolase; NMR {Listeria monocytogenes} PDB: 2aj1_A
Probab=98.38 E-value=5.9e-07 Score=71.86 Aligned_cols=60 Identities=23% Similarity=0.406 Sum_probs=52.5
Q ss_pred EEEEEeCCCCChhhHHHHHHhhhCCCCeeEEEEEeccCEEEEEECCCCCCHHHHHHHhHhcCcchhh
Q 004259 47 RIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEI 113 (765)
Q Consensus 47 ~~~~~i~gm~C~~C~~~Ie~~l~~~~Gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~ 113 (765)
+..|.|.||+|++|+++|++++++++||.++.+++..+++.+.++.. .+.++++||.+.+
T Consensus 4 ~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~-------~~~i~~~Gy~~~~ 63 (71)
T 2aj0_A 4 KTVYRVDGLSCTNCAAKFERNVKEIEGVTEAIVNFGASKITVTGEAS-------IQQVEQAGAFEHL 63 (71)
T ss_dssp EEEEEEESCCCHHHHHHHHHHHHHSTTEEEEEECCSSEEEEEEESCC-------HHHHHHHHTTTTC
T ss_pred EEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEECCCCEEEEEecCc-------HHHHHHhCCCccc
Confidence 56899999999999999999999999999999999999999987642 3467888997654
No 87
>1qup_A Superoxide dismutase 1 copper chaperone; two domains, beta-alpha-beta-BETA-alpha-beta and beta barrel; 1.80A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1
Probab=98.32 E-value=1.2e-06 Score=86.99 Aligned_cols=68 Identities=24% Similarity=0.500 Sum_probs=60.9
Q ss_pred eeceeecccccchhhHHHHHhhhcCCCCeeeEEeeeccCeEEEEeCCCCCCHHHHHHHHHhcCCceeEeecC
Q 004259 128 IVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASFVQSS 199 (765)
Q Consensus 128 ~~~~~~i~gm~C~~C~~~Ie~~l~~~~GV~~~~vn~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~~ 199 (765)
.+..|.|+ |+|++|+.+||++|++++||.++++|+.++++.|.++ .++++|.++|+++||++.+....
T Consensus 6 ~~~~l~V~-MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~---~~~~~I~~aI~~~Gy~a~~~~~~ 73 (222)
T 1qup_A 6 YEATYAIP-MHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESS---VAPSTIINTLRNCGKDAIIRGAG 73 (222)
T ss_dssp EEEEEECC-CCSTTHHHHHHHHHTTCTTEEEEEEETTTTEEEEEES---SCHHHHHHHHHHTTCCCEEECCS
T ss_pred eEEEEEEc-cccHHHHHHHHHHHhcCCCeeEEEEEcCCCEEEEecc---CCHHHHHHHHHHcCCccccccCC
Confidence 45679999 9999999999999999999999999999999999853 57899999999999998775543
No 88
>1jk9_B CCS, copper chaperone for superoxide dismutase; protein-protein complex, heterodimer, metallochaperone, amyotrophic lateral sclerosis; 2.90A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1
Probab=98.21 E-value=2.3e-06 Score=86.34 Aligned_cols=68 Identities=24% Similarity=0.493 Sum_probs=61.1
Q ss_pred eeceeecccccchhhHHHHHhhhcCCCCeeeEEeeeccCeEEEEeCCCCCCHHHHHHHHHhcCCceeEeecC
Q 004259 128 IVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASFVQSS 199 (765)
Q Consensus 128 ~~~~~~i~gm~C~~C~~~Ie~~l~~~~GV~~~~vn~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~~ 199 (765)
.+..|.|+ |+|++|+.+||++|++++||.++++|+.++++.|.. ..++++|.++|+++||++.+....
T Consensus 7 ~~~~l~V~-MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~---~~~~~~I~~aIe~~Gy~a~~~~~~ 74 (249)
T 1jk9_B 7 YEATYAIP-MHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVES---SVAPSTIINTLRNCGKDAIIRGAG 74 (249)
T ss_dssp EEEEEECC-CCSSSHHHHHHHHHTTCTTEEEEEEETTTTEEEEEE---SSCHHHHHHHHHTTTCCCEEEEES
T ss_pred eeEEEEEe-eccHHHHHHHHHHHhccCCeeEEEEEcCCCeEEEec---CCCHHHHHHHHHHhCCCcccccCC
Confidence 45689999 999999999999999999999999999999999984 357899999999999998876544
No 89
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=98.18 E-value=3.4e-06 Score=99.07 Aligned_cols=67 Identities=40% Similarity=0.555 Sum_probs=63.2
Q ss_pred EEEEEeCCCCChhhHHHHHHhhhCCCCeeEEEEEeccCEEEEEECCCCCCHHHHHHHhHhcCcchhh
Q 004259 47 RIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEI 113 (765)
Q Consensus 47 ~~~~~i~gm~C~~C~~~Ie~~l~~~~Gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~ 113 (765)
+.++.|+||+|++|+++||+++++++||.++++|+.++++.+.+++...+.+++.+++++.||++..
T Consensus 3 ~~~l~V~GM~Ca~Ca~~Ie~~L~~~~GV~~v~Vnl~~~~~~V~~d~~~~~~~~i~~ai~~~Gy~~~~ 69 (723)
T 3j09_A 3 ERTVRVTGMTCAMCVKSIETAVGSLEGVEEVRVNLATETAFIRFDEKRIDFETIKRVIEDLGYGVVD 69 (723)
T ss_dssp CEEEEEETCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHCCEESS
T ss_pred eEEEEeCCCCchHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEeCCCcCCHHHHHHHHHhcCCcccc
Confidence 5789999999999999999999999999999999999999999998878899999999999998754
No 90
>1qup_A Superoxide dismutase 1 copper chaperone; two domains, beta-alpha-beta-BETA-alpha-beta and beta barrel; 1.80A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1
Probab=98.04 E-value=9.7e-06 Score=80.39 Aligned_cols=65 Identities=22% Similarity=0.367 Sum_probs=58.5
Q ss_pred eEEEEEeCCCCChhhHHHHHHhhhCCCCeeEEEEEeccCEEEEEECCCCCCHHHHHHHhHhcCcchhhh
Q 004259 46 RRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEIL 114 (765)
Q Consensus 46 ~~~~~~i~gm~C~~C~~~Ie~~l~~~~Gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~ 114 (765)
++.+|.|+ |+|++|+++|+++|++++||.++.+|+.++++.+..+ .+++++.++++++||++.+.
T Consensus 6 ~~~~l~V~-MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~---~~~~~I~~aI~~~Gy~a~~~ 70 (222)
T 1qup_A 6 YEATYAIP-MHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESS---VAPSTIINTLRNCGKDAIIR 70 (222)
T ss_dssp EEEEEECC-CCSTTHHHHHHHHHTTCTTEEEEEEETTTTEEEEEES---SCHHHHHHHHHHTTCCCEEE
T ss_pred eEEEEEEc-cccHHHHHHHHHHHhcCCCeeEEEEEcCCCEEEEecc---CCHHHHHHHHHHcCCccccc
Confidence 46789999 9999999999999999999999999999999999753 56789999999999987553
No 91
>1jk9_B CCS, copper chaperone for superoxide dismutase; protein-protein complex, heterodimer, metallochaperone, amyotrophic lateral sclerosis; 2.90A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1
Probab=98.03 E-value=1.3e-05 Score=80.78 Aligned_cols=89 Identities=17% Similarity=0.232 Sum_probs=68.2
Q ss_pred ceEEEEEeCCCCChhhHHHHHHhhhCCCCeeEEEEEeccCEEEEEECCCCCCHHHHHHHhHhcCcchhhhcccCCCCCCC
Q 004259 45 MRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEILAESSTSGPKP 124 (765)
Q Consensus 45 ~~~~~~~i~gm~C~~C~~~Ie~~l~~~~Gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~~~~~~~~~ 124 (765)
.++.+|.|+ |+|++|+++|+++|++++||.++.+|+.++++.+... .+++++.++++++||.+.+......
T Consensus 6 ~~~~~l~V~-MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~---~~~~~I~~aIe~~Gy~a~~~~~~~~----- 76 (249)
T 1jk9_B 6 TYEATYAIP-MHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESS---VAPSTIINTLRNCGKDAIIRGAGKP----- 76 (249)
T ss_dssp CEEEEEECC-CCSSSHHHHHHHHHTTCTTEEEEEEETTTTEEEEEES---SCHHHHHHHHHTTTCCCEEEEESST-----
T ss_pred ceeEEEEEe-eccHHHHHHHHHHHhccCCeeEEEEEcCCCeEEEecC---CCHHHHHHHHHHhCCCcccccCCcc-----
Confidence 356789999 9999999999999999999999999999999999742 5678999999999998765433211
Q ss_pred Ccceeceeecccccchhh
Q 004259 125 QGTIVGQYTIGGMTCAAC 142 (765)
Q Consensus 125 ~~~~~~~~~i~gm~C~~C 142 (765)
.......+.-.++.|.+|
T Consensus 77 ~~~Av~~l~~~~~~~~~~ 94 (249)
T 1jk9_B 77 NSSAVAILETFQKYTIDQ 94 (249)
T ss_dssp TSEEEEEEEESSCCTTSC
T ss_pred cceeEEEecccccccccc
Confidence 112223344445567766
No 92
>4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A
Probab=94.64 E-value=0.0055 Score=63.63 Aligned_cols=40 Identities=23% Similarity=0.155 Sum_probs=30.9
Q ss_pred HhhcceEEecchHHhhh---------cCCcEEEecCCCccccCceEEEEE
Q 004259 628 GANNGVLIKGGDALERA---------QKIKYVIFDKTGTLTQGRATVTTA 668 (765)
Q Consensus 628 ~~~~gilik~~~~le~l---------g~v~~i~fDKTGTLT~g~~~v~~~ 668 (765)
+.|.++++|+++.+|+. .++. |+||||||||++......+
T Consensus 16 l~k~~v~ikd~~~~e~~i~~~~kgg~~kL~-VV~DfdgTLT~~~~~g~~~ 64 (297)
T 4fe3_A 16 FQKSSVRIKNPTRVEEIICGLIKGGAAKLQ-IITDFNMTLSRFSYNGKRC 64 (297)
T ss_dssp GTSTTEECSCHHHHHHHHHHHHHHHHHHEE-EEECCTTTTBCSEETTEEC
T ss_pred HhcCCeEEcChHHHHHHHHHHHhCcchhEE-EEEcCCCCceeeccCCeEe
Confidence 47899999999999873 2333 7889999999977655444
No 93
>4gwb_A Peptide methionine sulfoxide reductase MSRA 3; structural genomics, protein structure initiative, nysgrc, R PSI-biology; 1.20A {Sinorhizobium meliloti}
Probab=86.75 E-value=1.1 Score=41.28 Aligned_cols=49 Identities=27% Similarity=0.401 Sum_probs=42.9
Q ss_pred hhhHHHHHhhhcCCCCeeeEEeeeccC---------------eEEEEeCCCCCCHHHHHHHHHh
Q 004259 140 AACVNSVEGILRGLPGVKRAVVALATS---------------LGEVEYDPTVISKDDIANAIED 188 (765)
Q Consensus 140 ~~C~~~Ie~~l~~~~GV~~~~vn~~~~---------------~~~v~~~~~~~~~~~i~~~i~~ 188 (765)
.+|=|-+|..+++++||.++.+-++.+ .+.|.|||..++.++|++..=+
T Consensus 9 gGCFWg~E~~f~~l~GV~~t~~GYagG~~~nPtY~~v~~HaE~V~V~yDp~~isy~~LL~~F~~ 72 (168)
T 4gwb_A 9 GGCFWGMQDLIRKLPGVIETRVGYTGGDVPNATYRNHGTHAEGIEIIFDPERISYRRILELFFQ 72 (168)
T ss_dssp ESCHHHHHHHHTTSTTEEEEEEEEESSSCTTCBTTBCTTCEEEEEEEECTTTCCHHHHHHHHHH
T ss_pred ccCccchHHHHhcCCCeEEEEEEcCCCcCCCCcccccCceEEEEEEEECCCCCCHHHHHHHHHh
Confidence 468888999999999999999988765 7899999999999999987644
No 94
>2v50_A Multidrug resistance protein MEXB; DDM, RND, membrane, detergent, transport, cell membrane, transmembrane, membrane protein; HET: LMT; 3.00A {Pseudomonas aeruginosa PA01}
Probab=84.18 E-value=48 Score=40.24 Aligned_cols=144 Identities=15% Similarity=0.164 Sum_probs=82.4
Q ss_pred ceEEEEEeCCCCChh----hHHHHHHhhhCCCCeeEEEEEec---cCEEEEEECCCCC---CHHHHHHHhHhc--Ccchh
Q 004259 45 MRRIQVGVTGMTCAA----CSNSVEGALMGLKGVAKASVALL---QNKADVVFDPDLV---KDEDIKNAIEDA--GFEAE 112 (765)
Q Consensus 45 ~~~~~~~i~gm~C~~----C~~~Ie~~l~~~~Gv~~~~v~~~---~~~~~v~~~~~~~---~~~~i~~~i~~~--Gy~~~ 112 (765)
.-.+...-+|.+=.. -...+|+.+++.+||.++..... .....+.+++... ...++.+.+.+. .++..
T Consensus 42 ~v~v~~~~pg~s~~~~~~~v~~~iE~~l~~~~~v~~v~s~sg~~~~~~i~v~~~~~~~~~~~~~~v~~~l~~~~~~lP~~ 121 (1052)
T 2v50_A 42 AIAVQVSYPGASAETVQDTVVQVIEQQMNGIDNLRYISSESNSDGSMTITVTFEQGTDPDIAQVQVQNKLQLATPLLPQE 121 (1052)
T ss_dssp EEEEEEECTTCCHHHHHHHTHHHHHTTCCSCTTEEEEECCEETTSEEEEEEEECSSCCHHHHHHHHHHHHHHHGGGSCHH
T ss_pred eEEEEEEeCCCCHHHHHHHHHHHHHHHHcCCCCceEEEEEecCCCeEEEEEEEECCCCHHHHHHHHHHHHHHHHhhCCCC
Confidence 334556667765433 45788889999999988876542 2334555654321 123455555432 12211
Q ss_pred hhcccCCCCCCCCcceeceeeccccc-------chh-hHHHHHhhhcCCCCeeeEEeeeccCeEEEEeCCC-----CCCH
Q 004259 113 ILAESSTSGPKPQGTIVGQYTIGGMT-------CAA-CVNSVEGILRGLPGVKRAVVALATSLGEVEYDPT-----VISK 179 (765)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~i~gm~-------C~~-C~~~Ie~~l~~~~GV~~~~vn~~~~~~~v~~~~~-----~~~~ 179 (765)
. ..+............+.+.+.|-+ -.. -.+.+++.|+++|||.+++++-....+.|..|+. .++.
T Consensus 122 ~-~~p~i~~~~~~~~~~~~~~l~g~~~~~~~~~L~~~a~~~i~~~L~~i~gv~~v~~~g~~~~i~i~id~~kl~~~Gls~ 200 (1052)
T 2v50_A 122 V-QRQGIRVTKAVKNFLMVVGVVSTDGSMTKEDLSNYIVSNIQDPLSRTKGVGDFQVFGSQYSMRIWLDPAKLNSYQLTP 200 (1052)
T ss_dssp H-HTTCCEEECEEEEEEEEEEEEESSTTSCHHHHHHHHHHHTHHHHHTSTTEEEEEESSCCEEEEEEECHHHHTTTTCCH
T ss_pred C-CCCeeEecCCCCcceEEEEEEcCCCCCCHHHHHHHHHHHHHHHHhCCCCceEEEecCCcEEEEEEeCHHHHHHcCCCH
Confidence 1 000000000001123455665532 112 2357999999999999999875456678888774 3688
Q ss_pred HHHHHHHHhc
Q 004259 180 DDIANAIEDA 189 (765)
Q Consensus 180 ~~i~~~i~~~ 189 (765)
+++.++++..
T Consensus 201 ~~v~~~l~~~ 210 (1052)
T 2v50_A 201 GDVSSAIQAQ 210 (1052)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhc
Confidence 9999999764
No 95
>1fvg_A Peptide methionine sulfoxide reductase; oxidoreductase; 1.60A {Bos taurus} SCOP: d.58.28.1 PDB: 1fva_A 2l90_A*
Probab=83.08 E-value=1.8 Score=41.06 Aligned_cols=49 Identities=22% Similarity=0.316 Sum_probs=42.1
Q ss_pred hhhHHHHHhhhcCCCCeeeEEeeeccCe-------------------EEEEeCCCCCCHHHHHHHHHh
Q 004259 140 AACVNSVEGILRGLPGVKRAVVALATSL-------------------GEVEYDPTVISKDDIANAIED 188 (765)
Q Consensus 140 ~~C~~~Ie~~l~~~~GV~~~~vn~~~~~-------------------~~v~~~~~~~~~~~i~~~i~~ 188 (765)
.+|=|-+|+.+.+++||.++.+-++.+. +.|.|||..++.++|++..=+
T Consensus 50 gGCFWg~E~~F~~l~GV~~t~vGYagG~~~nPtY~~Vcsg~TGHaEaV~V~yDp~~isy~~LL~~F~~ 117 (199)
T 1fvg_A 50 MGCFWGAERKFWTLKGVYSTQVGFAGGYTPNPTYKEVCSGKTGHAEVVRVVFQPEHISFEELLKVFWE 117 (199)
T ss_dssp ESSHHHHHHHHHTSTTEEEEEEEEESSSCSSCCHHHHHHTCSCCEEEEEEEECTTTSCHHHHHHHHHH
T ss_pred cCCeeeeHHHHhhCCCeEEEEeeccCCCCCCCChhheecCCCCCeEEEEEEECCCcCCHHHHHHHHHH
Confidence 4688888999999999999999887654 899999999999999987643
No 96
>2j89_A Methionine sulfoxide reductase A; MSRA, poplar, oxidoreductase; 1.7A {Populus trichocarpa}
Probab=80.89 E-value=2.3 Score=41.70 Aligned_cols=49 Identities=31% Similarity=0.483 Sum_probs=42.1
Q ss_pred hhhHHHHHhhhcCCCCeeeEEeeeccCe-------------------EEEEeCCCCCCHHHHHHHHHh
Q 004259 140 AACVNSVEGILRGLPGVKRAVVALATSL-------------------GEVEYDPTVISKDDIANAIED 188 (765)
Q Consensus 140 ~~C~~~Ie~~l~~~~GV~~~~vn~~~~~-------------------~~v~~~~~~~~~~~i~~~i~~ 188 (765)
.+|=|-+|+.+.+++||.++.+-++.+. +.|.|||..++.++|++..=+
T Consensus 101 gGCFWgvE~~F~~l~GV~~t~vGYaGG~t~nPTYeeVcsG~TGHaEaV~V~YDP~~ISy~~LL~~Fw~ 168 (261)
T 2j89_A 101 AGCFWGVELAFQRVPGVTKTEVGYTQGLLHNPTYEDVCTGTTNHNEVVRVQYDPKECSFDTLIDVLWA 168 (261)
T ss_dssp ESSHHHHHHHHHTSTTEEEEEEEEESSSCSSCCHHHHHTTCSCCEEEEEEEECTTTSCHHHHHHHHHH
T ss_pred cCCeeeeHHHHhhCCCeEEEEeeecCCCCCCCChhhcccCCCCCeEEEEEEECCCcCCHHHHHHHHHH
Confidence 4688889999999999999999887654 899999999999999886643
No 97
>3bqh_A PILB, peptide methionine sulfoxide reductase MSRA/MSRB; methionine sulfoxide reductase A, oxidized form, elect transport; 1.95A {Neisseria meningitidis} PDB: 3bqe_A 3bqf_A* 3bqg_A
Probab=80.75 E-value=2.1 Score=40.39 Aligned_cols=49 Identities=29% Similarity=0.379 Sum_probs=41.8
Q ss_pred hhhHHHHHhhhcCCCCeeeEEeeeccCe-------------------EEEEeCCCCCCHHHHHHHHHh
Q 004259 140 AACVNSVEGILRGLPGVKRAVVALATSL-------------------GEVEYDPTVISKDDIANAIED 188 (765)
Q Consensus 140 ~~C~~~Ie~~l~~~~GV~~~~vn~~~~~-------------------~~v~~~~~~~~~~~i~~~i~~ 188 (765)
.+|=|-+|..+.+++||.++.+-++.+. +.|.|||..++.++|++..=+
T Consensus 9 gGCFWg~E~~F~~~~GV~~t~vGYagG~~~nPtY~~Vc~g~tGHaEaV~V~yDp~~isy~~LL~~f~~ 76 (193)
T 3bqh_A 9 GGCFWGLEAYFQRIDGVVDAVSGYANGNTKNPSYEDVSYRHTGHAETVKVTYDADKLSLDDILQYFFR 76 (193)
T ss_dssp ESCHHHHHHHHHTSTTEEEEEEEEESCSSSSCCHHHHHHSCCCCEEEEEEEEETTTCCHHHHHHHHHH
T ss_pred cCCeeehHHHHhcCCCEEEEEEeccCCcCCCCChheeecCCCCCeEEEEEEECCCcCCHHHHHHHHHH
Confidence 4688889999999999999998876653 789999999999999886643
No 98
>1nwa_A Peptide methionine sulfoxide reductase MSRA; oxidoreductase, product complex, structural genomics, PSI, protein structure initiative; 1.50A {Mycobacterium tuberculosis} SCOP: d.58.28.1
Probab=80.62 E-value=2.5 Score=40.08 Aligned_cols=49 Identities=22% Similarity=0.403 Sum_probs=41.7
Q ss_pred hhhHHHHHhhhcCCCCeeeEEeeecc---------------CeEEEEeCCCCCCHHHHHHHHHh
Q 004259 140 AACVNSVEGILRGLPGVKRAVVALAT---------------SLGEVEYDPTVISKDDIANAIED 188 (765)
Q Consensus 140 ~~C~~~Ie~~l~~~~GV~~~~vn~~~---------------~~~~v~~~~~~~~~~~i~~~i~~ 188 (765)
.+|=|-+|..+.+++||.++.+-++. +.+.|.|||..++.++|++..=+
T Consensus 32 gGCFWg~E~~F~~l~GV~~t~vGYaGG~~~nPtYe~~G~HaEaV~V~yDp~~iSy~~LL~~Ff~ 95 (203)
T 1nwa_A 32 GGCFWGLQDLIRNQPGVVSTRVGYSGGNIPNATYRNHGTHAEAVEIIFDPTVTDYRTLLEFFFQ 95 (203)
T ss_dssp ESCHHHHHHHHTTSTTEEEEEEEEESSSCSSCCSSCCTTCEEEEEEEECTTTCCHHHHHHHHHH
T ss_pred cCCeeeeHHHHhcCCCeEEEEeeecCCCCCCCChhhcCCceEEEEEEECCCcCCHHHHHHHHHH
Confidence 46888889999999999999988765 45789999999999999887643
No 99
>1ff3_A Peptide methionine sulfoxide reductase; alpha beta roll, PMSR, MSRA, oxidoreductase; 1.90A {Escherichia coli} SCOP: d.58.28.1 PDB: 2gt3_A 2iem_A
Probab=80.01 E-value=2.5 Score=40.49 Aligned_cols=49 Identities=24% Similarity=0.386 Sum_probs=41.8
Q ss_pred hhhHHHHHhhhcCCCCeeeEEeeecc-------------------CeEEEEeCCCCCCHHHHHHHHHh
Q 004259 140 AACVNSVEGILRGLPGVKRAVVALAT-------------------SLGEVEYDPTVISKDDIANAIED 188 (765)
Q Consensus 140 ~~C~~~Ie~~l~~~~GV~~~~vn~~~-------------------~~~~v~~~~~~~~~~~i~~~i~~ 188 (765)
.+|=|-+|+.+.+++||.++.+-++. +.+.|.|||..++.++|++..=+
T Consensus 49 gGCFWg~E~~F~~l~GV~~t~vGYaGG~~~nPtY~~VcsG~TGHaEaV~V~yDp~~isy~~LL~~F~~ 116 (211)
T 1ff3_A 49 MGXFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYDPSVISYEQLLQVFWE 116 (211)
T ss_dssp CSSHHHHHHHHHTSTTEEEEEEEEESSSCSSCCHHHHHHTCSCCEEEEEEEECTTTSCHHHHHHHHHH
T ss_pred cCCeEEehhhHhcCCCeEEEEeeecCCCCCCCChhhccCCCCCceEEEEEEECCCcCCHHHHHHHHHH
Confidence 46888889999999999999998874 35899999999999999987644
No 100
>4dx5_A Acriflavine resistance protein B; multidrug efflux protein, membrane protein, transpor; HET: LMT OCT D10 HEX D12 MIY C14 LMU DD9 UND GOL; 1.90A {Escherichia coli} PDB: 2hrt_A* 2gif_A* 4dx7_A* 4dx6_A* 3noc_A* 1oy6_A* 1oy9_A* 1oyd_A* 1oy8_A* 1oye_A 2rdd_A* 2w1b_A* 3d9b_A 2i6w_A* 3nog_A* 1t9x_A* 1t9t_A* 1t9v_A* 1t9w_A* 1t9u_A* ...
Probab=78.52 E-value=1e+02 Score=37.28 Aligned_cols=142 Identities=11% Similarity=0.148 Sum_probs=79.5
Q ss_pred ceEEEEEeCCCCChh----hHHHHHHhhhCCCCeeEEEEEe-ccCE--EEEEECCCCCCHH----HHHHHhHhc--Ccch
Q 004259 45 MRRIQVGVTGMTCAA----CSNSVEGALMGLKGVAKASVAL-LQNK--ADVVFDPDLVKDE----DIKNAIEDA--GFEA 111 (765)
Q Consensus 45 ~~~~~~~i~gm~C~~----C~~~Ie~~l~~~~Gv~~~~v~~-~~~~--~~v~~~~~~~~~~----~i~~~i~~~--Gy~~ 111 (765)
.-.+...-+|.+=.. -...+|++++.++||.++...- ..+. ..+.+++. .+.+ ++.+.+.+. .++.
T Consensus 42 ~v~V~~~~pgas~~~ve~~vt~~iE~~l~~~~~v~~i~s~s~~~g~~~i~v~~~~~-~d~~~a~~~v~~~~~~~~~~lP~ 120 (1057)
T 4dx5_A 42 AVTISASYPGADAKTVQDTVTQVIEQNMNGIDNLMYMSSNSDSTGTVQITLTFESG-TDADIAQVQVQNKLQLAMPLLPQ 120 (1057)
T ss_dssp EEEEEEECTTCCHHHHHHHTHHHHHHTCCSCTTEEEEEEEEETTSEEEEEEEECTT-CCHHHHHHHHHHHHHHHGGGSCH
T ss_pred eEEEEEEeCCCCHHHHHHHHHHHHHHHHcCCCCcEEEEEEecCCCeEEEEEEEeCC-CCHHHHHHHHHHHHHHHHhhCCC
Confidence 334566667765332 3467899999999999876654 2243 45556554 3333 344444332 1221
Q ss_pred hhhcccCC-CCCCCCcceeceeecccc----cc---hhh-HHHHHhhhcCCCCeeeEEeeeccCeEEEEeCCCC-----C
Q 004259 112 EILAESST-SGPKPQGTIVGQYTIGGM----TC---AAC-VNSVEGILRGLPGVKRAVVALATSLGEVEYDPTV-----I 177 (765)
Q Consensus 112 ~~~~~~~~-~~~~~~~~~~~~~~i~gm----~C---~~C-~~~Ie~~l~~~~GV~~~~vn~~~~~~~v~~~~~~-----~ 177 (765)
....+... ....... ...+.+.+- +- ..- .+.+++.|+++|||.++++.-....+.|..|++. +
T Consensus 121 ~~~~p~~~~~~~~~~~--~~~~~l~~~~~~~~~~~L~~~a~~~i~~~l~~i~gv~~v~~~g~~~~i~i~~d~~~l~~~gl 198 (1057)
T 4dx5_A 121 EVQQQGVSVEKSSSSF--LMVVGVINTDGTMTQEDISDYVAANMKDAISRTSGVGDVQLFGSQYAMRIWMNPNELNKFQL 198 (1057)
T ss_dssp HHHHHCCEEEEBCSSC--SEEEEEEETTSCSCHHHHHHHHHHHTHHHHHTSTTEEEEEESSCCEEEEEEECHHHHHHTTC
T ss_pred ccCCCcceeccCCCcc--eEEEEEEeCCCCCCHHHHHHHHHHHHHHHHhCCCCceEEEecCCcEEEEEEeCHHHHHHcCC
Confidence 11100000 0000111 123334332 11 112 3679999999999999988544567788888743 6
Q ss_pred CHHHHHHHHHhc
Q 004259 178 SKDDIANAIEDA 189 (765)
Q Consensus 178 ~~~~i~~~i~~~ 189 (765)
+.+++.++++..
T Consensus 199 t~~~v~~~l~~~ 210 (1057)
T 4dx5_A 199 TPVDVITAIKAQ 210 (1057)
T ss_dssp CHHHHHHHHHHH
T ss_pred CHHHHHHHHHHh
Confidence 788999999863
No 101
>2z51_A NIFU-like protein 2, chloroplast; CNFU, iron-sulfur cluster biosynthesis, metal transport; 1.35A {Arabidopsis thaliana} PDB: 2jnv_A
Probab=74.48 E-value=19 Score=32.74 Aligned_cols=118 Identities=13% Similarity=0.209 Sum_probs=67.7
Q ss_pred HHHHHhHhcCcchhhhcccCCCCCCCCcceeceeecccccchhhHH-------HHHhhhc-CCCCeeeEEeeeccCeEEE
Q 004259 99 DIKNAIEDAGFEAEILAESSTSGPKPQGTIVGQYTIGGMTCAACVN-------SVEGILR-GLPGVKRAVVALATSLGEV 170 (765)
Q Consensus 99 ~i~~~i~~~Gy~~~~~~~~~~~~~~~~~~~~~~~~i~gm~C~~C~~-------~Ie~~l~-~~~GV~~~~vn~~~~~~~v 170 (765)
+++-.+...|-++++.+-. + ..+.++..| .|.+|.. .||+.|+ .+|.+..+........
T Consensus 15 ~iRP~l~~dGGdvelv~v~-------~--~~V~v~l~G-aC~gC~ss~~Tlk~~Ie~~L~~~vpev~~V~~v~~~~e--- 81 (154)
T 2z51_A 15 EIRPYLMSDGGNVALHEID-------G--NVVRVKLQG-ACGSCPSSTMTMKMGIERRLMEKIPEIVAVEALPDEET--- 81 (154)
T ss_dssp HHHHHHHHTTEEEEEEEEE-------T--TEEEEEEEH-HHHTCHHHHHHHHHHHHHHHHHHCTTCCEEEECCSSCC---
T ss_pred HhChHHHhcCCeEEEEEEE-------C--CEEEEEEEC-CCCCCCccHhHHHHHHHHHHHHhCCCceEEEEccCchh---
Confidence 4555666667666654432 1 245666667 6888854 4667766 5788876654321110
Q ss_pred EeCCCCCCHHHHHHHHHhc--------CCceeEeecCCcceeEEEEecccchhhh---HHHHhhhc-cCCCceEEE
Q 004259 171 EYDPTVISKDDIANAIEDA--------GFEASFVQSSGQDKILLQVTGVLCELDA---HFLEGILS-NFKGVRQFR 234 (765)
Q Consensus 171 ~~~~~~~~~~~i~~~i~~~--------Gy~~~~~~~~~~~~~~~~i~gm~c~~ca---~~ie~~l~-~~~GV~~v~ 234 (765)
.-..+.+++.+.|+++ |=++++..- +.+.+.+++.|- |.+|. ..||..|. ..|+|..|.
T Consensus 82 ---~l~L~~~~v~~~L~~iRP~L~~~dGGdvelv~v-~~~~v~v~l~Ga-c~~~~Tlk~~Ie~~l~e~vP~i~~V~ 152 (154)
T 2z51_A 82 ---GLELNEENIEKVLEEIRPYLIGTADGSLDLVEI-EDPIVKIRITGP-AAGVMTVRVAVTQKLREKIPSIAAVQ 152 (154)
T ss_dssp ---SCCSSHHHHHHHHHHHGGGCCGGGCCEEEEEEE-ETTEEEEEEESG-GGGCHHHHHHHHHHHHHHCTTCCEEE
T ss_pred ---hhHHHHHHHHHHHHHHHHHhhhcCCCCeEEEEE-ECCEEEEEEecC-CcccHhHHHHHHHHHHHHCCCccEEE
Confidence 0123556676666642 334444333 235677888875 76674 35776766 468887765
No 102
>3e0m_A Peptide methionine sulfoxide reductase MSRA/MSRB 1; fusion, msrab, linker, hinge, cell membrane, membrane, multifunctional enzyme, oxidoreductase; 2.40A {Streptococcus pneumoniae}
Probab=73.72 E-value=4.7 Score=40.93 Aligned_cols=49 Identities=22% Similarity=0.263 Sum_probs=42.3
Q ss_pred hhhHHHHHhhhcCCCCeeeEEeeeccCe-----------------EEEEeCCCCCCHHHHHHHHHh
Q 004259 140 AACVNSVEGILRGLPGVKRAVVALATSL-----------------GEVEYDPTVISKDDIANAIED 188 (765)
Q Consensus 140 ~~C~~~Ie~~l~~~~GV~~~~vn~~~~~-----------------~~v~~~~~~~~~~~i~~~i~~ 188 (765)
.+|=|-+|..+.+++||.++.+-++.+. +.|.|||..++.++|++..=+
T Consensus 9 gGCFWg~E~~F~~l~GV~~t~~GYagG~~~nPtY~~Vc~TGHaEaV~V~yDp~~isy~~LL~~f~~ 74 (313)
T 3e0m_A 9 GGCFWGLEEYFSRISGVLETSVGYANGQVETTNYQLLKETDHAETVQVIYDEKEVSLREILLYYFR 74 (313)
T ss_dssp CSCHHHHHHHHTTSTTEEEEEEEEESCSSSCCCTTTHHHHTCEEEEEEEECTTTSCHHHHHHHHHH
T ss_pred cCCchhhHHHHhhCCCeEEeecccCCCCCCCCChhhhccCCCeEEEEEEECCCcCCHHHHHHHHHh
Confidence 4688889999999999999999887654 889999999999999886643
No 103
>4gwb_A Peptide methionine sulfoxide reductase MSRA 3; structural genomics, protein structure initiative, nysgrc, R PSI-biology; 1.20A {Sinorhizobium meliloti}
Probab=69.37 E-value=6.4 Score=36.26 Aligned_cols=49 Identities=22% Similarity=0.426 Sum_probs=39.0
Q ss_pred ccchhhhHHHHhhhccCCCceEEEeecCC---------------CeEEEEecCCCCChhhHHHhhhh
Q 004259 211 VLCELDAHFLEGILSNFKGVRQFRFDKIS---------------GELEVLFDPEALSSRSLVDGIAG 262 (765)
Q Consensus 211 m~c~~ca~~ie~~l~~~~GV~~v~vn~~~---------------~~~~V~ydp~~i~~~~i~~~i~~ 262 (765)
+-|=.| +|..+..++||.++.+-.++ +.+.|.|||..++.++|++..=.
T Consensus 9 gGCFWg---~E~~f~~l~GV~~t~~GYagG~~~nPtY~~v~~HaE~V~V~yDp~~isy~~LL~~F~~ 72 (168)
T 4gwb_A 9 GGCFWG---MQDLIRKLPGVIETRVGYTGGDVPNATYRNHGTHAEGIEIIFDPERISYRRILELFFQ 72 (168)
T ss_dssp ESCHHH---HHHHHTTSTTEEEEEEEEESSSCTTCBTTBCTTCEEEEEEEECTTTCCHHHHHHHHHH
T ss_pred ccCccc---hHHHHhcCCCeEEEEEEcCCCcCCCCcccccCceEEEEEEEECCCCCCHHHHHHHHHh
Confidence 345444 67888999999999986654 47899999999999999987543
No 104
>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A
Probab=66.92 E-value=68 Score=38.80 Aligned_cols=197 Identities=16% Similarity=0.146 Sum_probs=92.8
Q ss_pred HHHHHHHHHHhchHHHHHHHHHhcCCC-----eEEEEEe-c-CCCceeeeEEeeccCcCCCCEEEEcCCCccCccEEEEe
Q 004259 409 LFGKYLEILAKGKTSDAIKKLVELAPA-----TALLVVK-D-KVGKCIEEREIDALLIQSGDTLKVLPGTKLPADGIVVW 481 (765)
Q Consensus 409 ~~~~~le~~~~~k~~~~l~~l~~~~~~-----~~~v~~~-~-~~g~~~~~~~i~~~~l~~GDiv~v~~Ge~iP~Dg~vl~ 481 (765)
.++ +++.+...++.++++++...... ....+.- + .-| ....+...+.+|-|.++++.++. -+|=-.+.
T Consensus 155 ~~~-~~qe~ka~~al~~L~~l~~~~a~ViRdG~~~~I~~~eLv~G---DiV~l~~Gd~VPAD~~ll~~~~l-~VdES~LT 229 (1034)
T 3ixz_A 155 CFG-YYQEFKSTNIIASFKNLVPQQATVIRDGDKFQINADQLVVG---DLVEMKGGDRVPADIRILQAQGR-KVDNSSLT 229 (1034)
T ss_pred HHH-HHHHHHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCCCC---cEEEEcCCceecCCeEEEEeCCc-eEEecccC
Confidence 344 44555566788888887542221 1111100 0 113 45677888889999888876542 25555555
Q ss_pred ccce-eeccccCCCcceec----cCCCCceeeeeeeecceEEEEEEEeCCcchHHHHHHHHHHhccC-CChhHHHHHHHH
Q 004259 482 GTSY-VNESMVTGEAVPVL----KEINSPVIGGTINLHGVLHIQATKVGSDAVLSQIISLVETAQMS-KAPIQKFADFVA 555 (765)
Q Consensus 482 g~~~-Vdes~LTGEs~pv~----k~~g~~v~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~~~~~~~~-k~~~~~~~~~~~ 555 (765)
|++. |.-..-.-+..|.. .-.|..+..|+...-=...+.=+..| .+.+..+..+....+ ...++++...+.
T Consensus 230 GES~pv~K~~~~~~~~~~~~~n~~f~GT~v~~G~~~~vVv~tG~~T~~G---kI~~~~~~~~~~~tpl~~~~~~~~~~l~ 306 (1034)
T 3ixz_A 230 GESEPQTRSPECTHESPLETRNIAFFSTMCLEGTAQGLVVNTGDRTIIG---RIASLASGVENEKTPIAIEIEHFVDIIA 306 (1034)
T ss_pred CCCCCeeccCCCccccccccccceecceeEEeecceEEEEeehhhhHhh---HHHHhhcccccCCCcHHHHHHHHHHHHH
Confidence 6654 32221111111221 14577777776332111111111111 111121111111111 123455666666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCcchHHHHHHHHhheeeecccchhhhhHHHHHHHHHHH
Q 004259 556 SIFVPIVVTLALFTWLCWYVAGVLGAYPEQWLPENGTHFVFALMFSISVVVIACPCALGLATPTAVMVATGV 627 (765)
Q Consensus 556 ~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vlv~~~P~al~la~p~~~~~~~~~ 627 (765)
.+.+.+.+++.++.++...-+. ..+..++...++.+-.+.|.++.++.-++.....++
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~i~l~v~~iPe~Lp~~vti~la~~~~rmak~ 364 (1034)
T 3ixz_A 307 GLAILFGATFFIVAMCIGYTFL--------------RAMVFFMAIVVAYVPEGLLATVTVCLSLTAKRLASK 364 (1034)
T ss_pred HHHHHHHHHHHHHHHHhcchHH--------------HHHHHHHHHHHheeccccHHHHHHHHHHHHHHHhhC
Confidence 5555544444443333211111 123445566777778888888888887776554433
No 105
>3pim_A Peptide methionine sulfoxide reductase; methionine-S-sulfoxide reductase, oxidoreductase; 1.90A {Saccharomyces cerevisiae} PDB: 3pil_A 3pin_B
Probab=65.16 E-value=4.3 Score=38.05 Aligned_cols=48 Identities=21% Similarity=0.370 Sum_probs=40.0
Q ss_pred hhhHHHHHhhhcCC--CCeeeEEeeeccC-------------------------eEEEEeCCCCCCHHHHHHHHH
Q 004259 140 AACVNSVEGILRGL--PGVKRAVVALATS-------------------------LGEVEYDPTVISKDDIANAIE 187 (765)
Q Consensus 140 ~~C~~~Ie~~l~~~--~GV~~~~vn~~~~-------------------------~~~v~~~~~~~~~~~i~~~i~ 187 (765)
.+|=|-+|..++++ +||.++.+-++.+ .+.|.|||..++.++|++..=
T Consensus 26 gGCFWg~E~~F~~l~g~GV~~t~~GYagG~~~~~n~~~~PtY~~Vc~g~TGHaEaV~V~yDp~~isy~~LL~~Ff 100 (187)
T 3pim_A 26 CGCFWGTEHMYRKYLNDRIVDCKVGYANGEESKKDSPSSVSYKRVCGGDTDFAEVLQVSYNPKVITLRELTDFFF 100 (187)
T ss_dssp SSCHHHHHHHHHHHHGGGSSEEEEEEEEECCC---------CSCBTTBCTTCEEEEEEEECTTTSCHHHHHHHHT
T ss_pred cCCchhhHHHHHHhcCCCeEEEEeeecCCcccCCCCCCCCchhhhccCCCCCeEEEEEEECCccCCHHHHHHHHH
Confidence 46788888889999 9999988877666 278999999999999988763
No 106
>1fvg_A Peptide methionine sulfoxide reductase; oxidoreductase; 1.60A {Bos taurus} SCOP: d.58.28.1 PDB: 1fva_A 2l90_A*
Probab=60.97 E-value=10 Score=35.95 Aligned_cols=50 Identities=24% Similarity=0.295 Sum_probs=39.2
Q ss_pred cccchhhhHHHHhhhccCCCceEEEeecCC-------------------CeEEEEecCCCCChhhHHHhhhh
Q 004259 210 GVLCELDAHFLEGILSNFKGVRQFRFDKIS-------------------GELEVLFDPEALSSRSLVDGIAG 262 (765)
Q Consensus 210 gm~c~~ca~~ie~~l~~~~GV~~v~vn~~~-------------------~~~~V~ydp~~i~~~~i~~~i~~ 262 (765)
++-|=.| +|..+..++||.++.+-..+ +.+.|.|||..++.++|++..=.
T Consensus 49 agGCFWg---~E~~F~~l~GV~~t~vGYagG~~~nPtY~~Vcsg~TGHaEaV~V~yDp~~isy~~LL~~F~~ 117 (199)
T 1fvg_A 49 GMGCFWG---AERKFWTLKGVYSTQVGFAGGYTPNPTYKEVCSGKTGHAEVVRVVFQPEHISFEELLKVFWE 117 (199)
T ss_dssp EESSHHH---HHHHHHTSTTEEEEEEEEESSSCSSCCHHHHHHTCSCCEEEEEEEECTTTSCHHHHHHHHHH
T ss_pred ecCCeee---eHHHHhhCCCeEEEEeeccCCCCCCCChhheecCCCCCeEEEEEEECCCcCCHHHHHHHHHH
Confidence 4455555 56778899999999976554 35899999999999999987544
No 107
>1jdq_A TM006 protein, hypothetical protein TM0983; structural genomics; NMR {Thermotoga maritima} SCOP: d.68.3.3
Probab=60.84 E-value=38 Score=28.07 Aligned_cols=69 Identities=17% Similarity=0.257 Sum_probs=48.1
Q ss_pred ceeecccccchhhHHHHHhhhcCCCCeeeEEeeeccCeEEEEeCCCCCCHHHHHHHHHhcCCceeEeecCCcceeEEEE
Q 004259 130 GQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASFVQSSGQDKILLQV 208 (765)
Q Consensus 130 ~~~~i~gm~C~~C~~~Ie~~l~~~~GV~~~~vn~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~~~~~~~~~~i 208 (765)
..+...|+.|+.-.-+..++|++++. .+.+.|..|.. ...++|.+.+++.||.+......+.+..++.|
T Consensus 27 ~~LD~rGl~CP~Pvl~tkkaL~~l~~---------Ge~L~Vl~dd~-~a~~dI~~~~~~~G~~v~~~e~~~~g~~~i~I 95 (98)
T 1jdq_A 27 KTLDVRGEVCPVPDVETKRALQNMKP---------GEILEVWIDYP-MSKERIPETVKKLGHEVLEIEEVGPSEWKIYI 95 (98)
T ss_dssp EEEECSSCCSSHHHHHHHHHHHTCCT---------TCEEEEEESSC-THHHHHHHHHHHSSCCEEEEEECSSSCEEEEE
T ss_pred EEEeCCCCCCCHHHHHHHHHHHhCCC---------CCEEEEEECCc-cHHHHHHHHHHHCCCEEEEEEEecCCEEEEEE
Confidence 46889999999999999999998752 22334444432 35789999999999998765432124445544
No 108
>1nwa_A Peptide methionine sulfoxide reductase MSRA; oxidoreductase, product complex, structural genomics, PSI, protein structure initiative; 1.50A {Mycobacterium tuberculosis} SCOP: d.58.28.1
Probab=57.57 E-value=12 Score=35.45 Aligned_cols=50 Identities=24% Similarity=0.357 Sum_probs=39.1
Q ss_pred cccchhhhHHHHhhhccCCCceEEEeecCC---------------CeEEEEecCCCCChhhHHHhhhh
Q 004259 210 GVLCELDAHFLEGILSNFKGVRQFRFDKIS---------------GELEVLFDPEALSSRSLVDGIAG 262 (765)
Q Consensus 210 gm~c~~ca~~ie~~l~~~~GV~~v~vn~~~---------------~~~~V~ydp~~i~~~~i~~~i~~ 262 (765)
++-|=.| +|..+..++||.++.+-.++ +.+.|.|||..++.++|++..=.
T Consensus 31 agGCFWg---~E~~F~~l~GV~~t~vGYaGG~~~nPtYe~~G~HaEaV~V~yDp~~iSy~~LL~~Ff~ 95 (203)
T 1nwa_A 31 AGGCFWG---LQDLIRNQPGVVSTRVGYSGGNIPNATYRNHGTHAEAVEIIFDPTVTDYRTLLEFFFQ 95 (203)
T ss_dssp EESCHHH---HHHHHTTSTTEEEEEEEEESSSCSSCCSSCCTTCEEEEEEEECTTTCCHHHHHHHHHH
T ss_pred ecCCeee---eHHHHhcCCCeEEEEeeecCCCCCCCChhhcCCceEEEEEEECCCcCCHHHHHHHHHH
Confidence 4455555 57778899999999975543 56889999999999999987543
No 109
>3bqh_A PILB, peptide methionine sulfoxide reductase MSRA/MSRB; methionine sulfoxide reductase A, oxidized form, elect transport; 1.95A {Neisseria meningitidis} PDB: 3bqe_A 3bqf_A* 3bqg_A
Probab=56.32 E-value=12 Score=35.17 Aligned_cols=49 Identities=18% Similarity=0.221 Sum_probs=38.0
Q ss_pred cccchhhhHHHHhhhccCCCceEEEeecCC-------------------CeEEEEecCCCCChhhHHHhhh
Q 004259 210 GVLCELDAHFLEGILSNFKGVRQFRFDKIS-------------------GELEVLFDPEALSSRSLVDGIA 261 (765)
Q Consensus 210 gm~c~~ca~~ie~~l~~~~GV~~v~vn~~~-------------------~~~~V~ydp~~i~~~~i~~~i~ 261 (765)
++-|=.| +|..+..++||.++.+-.++ +.+.|.|||..++.++|++..=
T Consensus 8 agGCFWg---~E~~F~~~~GV~~t~vGYagG~~~nPtY~~Vc~g~tGHaEaV~V~yDp~~isy~~LL~~f~ 75 (193)
T 3bqh_A 8 AGGCFWG---LEAYFQRIDGVVDAVSGYANGNTKNPSYEDVSYRHTGHAETVKVTYDADKLSLDDILQYFF 75 (193)
T ss_dssp EESCHHH---HHHHHHTSTTEEEEEEEEESCSSSSCCHHHHHHSCCCCEEEEEEEEETTTCCHHHHHHHHH
T ss_pred ecCCeee---hHHHHhcCCCEEEEEEeccCCcCCCCChheeecCCCCCeEEEEEEECCCcCCHHHHHHHHH
Confidence 4445555 56778899999999975544 3588999999999999998654
No 110
>2j89_A Methionine sulfoxide reductase A; MSRA, poplar, oxidoreductase; 1.7A {Populus trichocarpa}
Probab=55.02 E-value=14 Score=36.24 Aligned_cols=51 Identities=22% Similarity=0.287 Sum_probs=39.5
Q ss_pred ecccchhhhHHHHhhhccCCCceEEEeecCC-------------------CeEEEEecCCCCChhhHHHhhhh
Q 004259 209 TGVLCELDAHFLEGILSNFKGVRQFRFDKIS-------------------GELEVLFDPEALSSRSLVDGIAG 262 (765)
Q Consensus 209 ~gm~c~~ca~~ie~~l~~~~GV~~v~vn~~~-------------------~~~~V~ydp~~i~~~~i~~~i~~ 262 (765)
-++-|=.| +|..+..++||.++.+-.++ +.+.|.|||..++-++|++..=.
T Consensus 99 fAgGCFWg---vE~~F~~l~GV~~t~vGYaGG~t~nPTYeeVcsG~TGHaEaV~V~YDP~~ISy~~LL~~Fw~ 168 (261)
T 2j89_A 99 FGAGCFWG---VELAFQRVPGVTKTEVGYTQGLLHNPTYEDVCTGTTNHNEVVRVQYDPKECSFDTLIDVLWA 168 (261)
T ss_dssp EEESSHHH---HHHHHHTSTTEEEEEEEEESSSCSSCCHHHHHTTCSCCEEEEEEEECTTTSCHHHHHHHHHH
T ss_pred EecCCeee---eHHHHhhCCCeEEEEeeecCCCCCCCChhhcccCCCCCeEEEEEEECCCcCCHHHHHHHHHH
Confidence 35556555 56778889999999986554 35899999999999999987543
No 111
>3lvj_C Sulfurtransferase TUSA; protein-protein complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PLP; 2.44A {Escherichia coli} SCOP: d.68.3.3 PDB: 3lvk_B* 1dcj_A
Probab=54.37 E-value=57 Score=25.86 Aligned_cols=68 Identities=13% Similarity=0.042 Sum_probs=47.2
Q ss_pred ceeecccccchhhHHHHHhhhcCCCCeeeEEeeeccCeEEEEeCCCCCCHHHHHHHHHhcCCceeEeecCCcceeEEEE
Q 004259 130 GQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASFVQSSGQDKILLQV 208 (765)
Q Consensus 130 ~~~~i~gm~C~~C~~~Ie~~l~~~~GV~~~~vn~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~~~~~~~~~~i 208 (765)
..+...|+.|+.-.-+..++|++++. .+.+.|..|.. ...++|.+..++.||....... +.+..++.|
T Consensus 11 ~~lD~rGl~CP~Pvl~~kkal~~l~~---------G~~l~V~~dd~-~a~~di~~~~~~~G~~~~~~~~-~~~~~~i~I 78 (82)
T 3lvj_C 11 HTLDALGLRCPEPVMMVRKTVRNMQP---------GETLLIIADDP-ATTRDIPGFCTFMEHELVAKET-DGLPYRYLI 78 (82)
T ss_dssp EEEECTTCCTTHHHHHHHHHHHTSCT---------TCEEEEEECCT-THHHHHHHHHHHTTCEEEEEEC-SSSSEEEEE
T ss_pred EEEECCCCCCCHHHHHHHHHHHhCCC---------CCEEEEEECCc-cHHHHHHHHHHHCCCEEEEEEe-cCCEEEEEE
Confidence 46888899999999999999998752 12333444332 3568899999999998865432 334455554
No 112
>1ff3_A Peptide methionine sulfoxide reductase; alpha beta roll, PMSR, MSRA, oxidoreductase; 1.90A {Escherichia coli} SCOP: d.58.28.1 PDB: 2gt3_A 2iem_A
Probab=53.62 E-value=16 Score=34.99 Aligned_cols=51 Identities=14% Similarity=0.199 Sum_probs=39.9
Q ss_pred cccchhhhHHHHhhhccCCCceEEEeecCC-------------------CeEEEEecCCCCChhhHHHhhhhc
Q 004259 210 GVLCELDAHFLEGILSNFKGVRQFRFDKIS-------------------GELEVLFDPEALSSRSLVDGIAGR 263 (765)
Q Consensus 210 gm~c~~ca~~ie~~l~~~~GV~~v~vn~~~-------------------~~~~V~ydp~~i~~~~i~~~i~~~ 263 (765)
++-|=.| +|..+..++||.++.+-.+. +.+.|.|||..++.++|++..=..
T Consensus 48 agGCFWg---~E~~F~~l~GV~~t~vGYaGG~~~nPtY~~VcsG~TGHaEaV~V~yDp~~isy~~LL~~F~~~ 117 (211)
T 1ff3_A 48 AMGXFWG---VERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYDPSVISYEQLLQVFWEN 117 (211)
T ss_dssp ECSSHHH---HHHHHHTSTTEEEEEEEEESSSCSSCCHHHHHHTCSCCEEEEEEEECTTTSCHHHHHHHHHHS
T ss_pred ecCCeEE---ehhhHhcCCCeEEEEeeecCCCCCCCChhhccCCCCCceEEEEEEECCCcCCHHHHHHHHHHh
Confidence 4556555 56778889999999986653 468999999999999999876443
No 113
>3lvj_C Sulfurtransferase TUSA; protein-protein complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PLP; 2.44A {Escherichia coli} SCOP: d.68.3.3 PDB: 3lvk_B* 1dcj_A
Probab=53.53 E-value=35 Score=27.16 Aligned_cols=56 Identities=13% Similarity=0.121 Sum_probs=42.8
Q ss_pred EEEEEeCCCCChhhHHHHHHhhhCCCCeeEEEEEeccCEEEEEECCCCCCHHHHHHHhHhcCcchh
Q 004259 47 RIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAE 112 (765)
Q Consensus 47 ~~~~~i~gm~C~~C~~~Ie~~l~~~~Gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~ 112 (765)
..++...|+.|+.-.-+..+++++++. ...+.+..+++ .....+.......||...
T Consensus 10 ~~~lD~rGl~CP~Pvl~~kkal~~l~~---------G~~l~V~~dd~-~a~~di~~~~~~~G~~~~ 65 (82)
T 3lvj_C 10 DHTLDALGLRCPEPVMMVRKTVRNMQP---------GETLLIIADDP-ATTRDIPGFCTFMEHELV 65 (82)
T ss_dssp SEEEECTTCCTTHHHHHHHHHHHTSCT---------TCEEEEEECCT-THHHHHHHHHHHTTCEEE
T ss_pred CEEEECCCCCCCHHHHHHHHHHHhCCC---------CCEEEEEECCc-cHHHHHHHHHHHCCCEEE
Confidence 367899999999999999999998752 23445555544 446788888899999864
No 114
>4dx5_A Acriflavine resistance protein B; multidrug efflux protein, membrane protein, transpor; HET: LMT OCT D10 HEX D12 MIY C14 LMU DD9 UND GOL; 1.90A {Escherichia coli} PDB: 2hrt_A* 2gif_A* 4dx7_A* 4dx6_A* 3noc_A* 1oy6_A* 1oy9_A* 1oyd_A* 1oy8_A* 1oye_A 2rdd_A* 2w1b_A* 3d9b_A 2i6w_A* 3nog_A* 1t9x_A* 1t9t_A* 1t9v_A* 1t9w_A* 1t9u_A* ...
Probab=52.24 E-value=58 Score=39.51 Aligned_cols=119 Identities=13% Similarity=0.160 Sum_probs=76.6
Q ss_pred HHHHHhhhcCCCCeeeEEeee---ccCeEEEEeCCCCCCHH----HHHHHHHhc--CCce-------eEeecCCcceeEE
Q 004259 143 VNSVEGILRGLPGVKRAVVAL---ATSLGEVEYDPTVISKD----DIANAIEDA--GFEA-------SFVQSSGQDKILL 206 (765)
Q Consensus 143 ~~~Ie~~l~~~~GV~~~~vn~---~~~~~~v~~~~~~~~~~----~i~~~i~~~--Gy~~-------~~~~~~~~~~~~~ 206 (765)
...+|+.++.++||+++.-.. ....+.++++++ .+.+ ++.+.+++. .++. ............+
T Consensus 62 t~~iE~~l~~~~~v~~i~s~s~~~g~~~i~v~~~~~-~d~~~a~~~v~~~~~~~~~~lP~~~~~p~~~~~~~~~~~~~~~ 140 (1057)
T 4dx5_A 62 TQVIEQNMNGIDNLMYMSSNSDSTGTVQITLTFESG-TDADIAQVQVQNKLQLAMPLLPQEVQQQGVSVEKSSSSFLMVV 140 (1057)
T ss_dssp HHHHHHTCCSCTTEEEEEEEEETTSEEEEEEEECTT-CCHHHHHHHHHHHHHHHGGGSCHHHHHHCCEEEEBCSSCSEEE
T ss_pred HHHHHHHHcCCCCcEEEEEEecCCCeEEEEEEEeCC-CCHHHHHHHHHHHHHHHHhhCCCccCCCcceeccCCCcceEEE
Confidence 467999999999999876554 233556777765 3433 445555432 2321 1111122223456
Q ss_pred EEeccc----c---hhhh-HHHHhhhccCCCceEEEeecCCCeEEEEecCCC-----CChhhHHHhhhh
Q 004259 207 QVTGVL----C---ELDA-HFLEGILSNFKGVRQFRFDKISGELEVLFDPEA-----LSSRSLVDGIAG 262 (765)
Q Consensus 207 ~i~gm~----c---~~ca-~~ie~~l~~~~GV~~v~vn~~~~~~~V~ydp~~-----i~~~~i~~~i~~ 262 (765)
.+.|-+ - ...+ ..++..|+..|||.++++......+.|+.||.. ++..++.+.++.
T Consensus 141 ~l~~~~~~~~~~~L~~~a~~~i~~~l~~i~gv~~v~~~g~~~~i~i~~d~~~l~~~glt~~~v~~~l~~ 209 (1057)
T 4dx5_A 141 GVINTDGTMTQEDISDYVAANMKDAISRTSGVGDVQLFGSQYAMRIWMNPNELNKFQLTPVDVITAIKA 209 (1057)
T ss_dssp EEEETTSCSCHHHHHHHHHHHTHHHHHTSTTEEEEEESSCCEEEEEEECHHHHHHTTCCHHHHHHHHHH
T ss_pred EEEeCCCCCCHHHHHHHHHHHHHHHHhCCCCceEEEecCCcEEEEEEeCHHHHHHcCCCHHHHHHHHHH
Confidence 665432 1 1233 588999999999999998666567789999864 888999888875
No 115
>2v50_A Multidrug resistance protein MEXB; DDM, RND, membrane, detergent, transport, cell membrane, transmembrane, membrane protein; HET: LMT; 3.00A {Pseudomonas aeruginosa PA01}
Probab=52.12 E-value=45 Score=40.46 Aligned_cols=120 Identities=14% Similarity=0.163 Sum_probs=77.7
Q ss_pred HHHHHhhhcCCCCeeeEEeee---ccCeEEEEeCCCCC---CHHHHHHHHHhc--CCcee-----Eee--cCCcceeEEE
Q 004259 143 VNSVEGILRGLPGVKRAVVAL---ATSLGEVEYDPTVI---SKDDIANAIEDA--GFEAS-----FVQ--SSGQDKILLQ 207 (765)
Q Consensus 143 ~~~Ie~~l~~~~GV~~~~vn~---~~~~~~v~~~~~~~---~~~~i~~~i~~~--Gy~~~-----~~~--~~~~~~~~~~ 207 (765)
...+|+.++++|||+++.... ....+.+++++... ...++.+.+++. .++.. +.. ......+.+.
T Consensus 62 ~~~iE~~l~~~~~v~~v~s~sg~~~~~~i~v~~~~~~~~~~~~~~v~~~l~~~~~~lP~~~~~p~i~~~~~~~~~~~~~~ 141 (1052)
T 2v50_A 62 VQVIEQQMNGIDNLRYISSESNSDGSMTITVTFEQGTDPDIAQVQVQNKLQLATPLLPQEVQRQGIRVTKAVKNFLMVVG 141 (1052)
T ss_dssp HHHHHTTCCSCTTEEEEECCEETTSEEEEEEEECSSCCHHHHHHHHHHHHHHHGGGSCHHHHTTCCEEECEEEEEEEEEE
T ss_pred HHHHHHHHcCCCCceEEEEEecCCCeEEEEEEEECCCCHHHHHHHHHHHHHHHHhhCCCCCCCCeeEecCCCCcceEEEE
Confidence 467899999999999887654 22455677776431 123566666642 23211 111 1112245677
Q ss_pred Eeccc--ch-----hh-hHHHHhhhccCCCceEEEeecCCCeEEEEecCCC-----CChhhHHHhhhh
Q 004259 208 VTGVL--CE-----LD-AHFLEGILSNFKGVRQFRFDKISGELEVLFDPEA-----LSSRSLVDGIAG 262 (765)
Q Consensus 208 i~gm~--c~-----~c-a~~ie~~l~~~~GV~~v~vn~~~~~~~V~ydp~~-----i~~~~i~~~i~~ 262 (765)
+.|-+ -. .. ...++..|+..|||.+++.+.....+.|+.||.+ ++..++.+.++.
T Consensus 142 l~g~~~~~~~~~L~~~a~~~i~~~L~~i~gv~~v~~~g~~~~i~i~id~~kl~~~Gls~~~v~~~l~~ 209 (1052)
T 2v50_A 142 VVSTDGSMTKEDLSNYIVSNIQDPLSRTKGVGDFQVFGSQYSMRIWLDPAKLNSYQLTPGDVSSAIQA 209 (1052)
T ss_dssp EEESSTTSCHHHHHHHHHHHTHHHHHTSTTEEEEEESSCCEEEEEEECHHHHTTTTCCHHHHHHHHHH
T ss_pred EEcCCCCCCHHHHHHHHHHHHHHHHhCCCCceEEEecCCcEEEEEEeCHHHHHHcCCCHHHHHHHHHh
Confidence 76643 11 22 3579999999999999999866677889999863 788888888763
No 116
>3ne5_A Cation efflux system protein CUSA; transmembrane helix, metal transport; 2.90A {Escherichia coli} PDB: 3k07_A 3k0i_A 3kso_A 3kss_A 3t53_A 3t51_A 3t56_A 4dop_A 4dnt_A
Probab=48.19 E-value=4.3e+02 Score=31.72 Aligned_cols=144 Identities=12% Similarity=0.126 Sum_probs=78.1
Q ss_pred ceEEEEEeCCCCChh----hHHHHHHhhhCCCCeeEEEEEeccC--EEEEEECCCCCCH----HHHHHHhHhc--Ccchh
Q 004259 45 MRRIQVGVTGMTCAA----CSNSVEGALMGLKGVAKASVALLQN--KADVVFDPDLVKD----EDIKNAIEDA--GFEAE 112 (765)
Q Consensus 45 ~~~~~~~i~gm~C~~----C~~~Ie~~l~~~~Gv~~~~v~~~~~--~~~v~~~~~~~~~----~~i~~~i~~~--Gy~~~ 112 (765)
.-.+...-+|.+=.. -...+|+.+++.+||.++...-..+ ...+.+++. .+. .++.+.+.+. .++..
T Consensus 53 ~v~V~~~~pg~s~~~~~~~v~~~iE~~l~~~~~v~~v~s~s~~g~~~i~v~~~~~-~d~~~~~~~v~~~~~~~~~~lP~~ 131 (1054)
T 3ne5_A 53 QVIIKTSYPGQAPQIVENQVTYPLTTTMLSVPGAKTVRGFSQFGDSYVYVIFEDG-TDPYWARSRVLEYLNQVQGKLPAG 131 (1054)
T ss_dssp EEEEEEECTTCCHHHHHHHTHHHHHHHHTTSTTEEEEEEEEETTEEEEEEEECTT-CCHHHHHHHHHHHHHTTSTTSCSS
T ss_pred EEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCceEEEEEEeCCeEEEEEEEECC-CCHHHHHHHHHHHHHHHHhcCCCc
Confidence 334556666755332 3467899999999999885433333 445566654 232 2344444432 11100
Q ss_pred hhcccCCCCCCCCcceeceeeccc----ccch---hhHH-HHHhhhcCCCCeeeEEeeec-cCeEEEEeCCC-----CCC
Q 004259 113 ILAESSTSGPKPQGTIVGQYTIGG----MTCA---ACVN-SVEGILRGLPGVKRAVVALA-TSLGEVEYDPT-----VIS 178 (765)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~i~g----m~C~---~C~~-~Ie~~l~~~~GV~~~~vn~~-~~~~~v~~~~~-----~~~ 178 (765)
. .+.- .....+......+.+.+ .+=. .-+. .++..|+++|||.++++.-. ...+.|..|++ .++
T Consensus 132 ~-~~~~-~~~~~~~~~~~~~~l~~~~g~~~~~~L~~~a~~~~~~~l~~~pgv~~V~~~g~~~~~i~i~id~~kl~~~gls 209 (1054)
T 3ne5_A 132 V-SAEL-GPDATGVGWIYEYALVDRSGKHDLADLRSLQDWFLKYELKTIPDVAEVASVGGVVKEYQVVIDPQRLAQYGIS 209 (1054)
T ss_dssp C-CEEE-CCSSCGGGEEEEEEEEESSSSSCHHHHHHHHHHTHHHHHTTSTTEEEEEEEESCCEEEEEEECHHHHHHTTCC
T ss_pred C-CCCC-CCCCCCccceEEEEEEcCCCCCCHHHHHHHHHHHHHHHHhcCCCeEEEEEeCCCcEEEEEEECHHHHHHcCCC
Confidence 0 0000 00001111123344432 2211 1233 47778999999999987543 35778888874 367
Q ss_pred HHHHHHHHHhcCC
Q 004259 179 KDDIANAIEDAGF 191 (765)
Q Consensus 179 ~~~i~~~i~~~Gy 191 (765)
.+++.++++....
T Consensus 210 ~~~v~~~l~~~~~ 222 (1054)
T 3ne5_A 210 LAEVKSALDASNQ 222 (1054)
T ss_dssp HHHHHHHHHTSSC
T ss_pred HHHHHHHHHHhcC
Confidence 8899999987643
No 117
>1jdq_A TM006 protein, hypothetical protein TM0983; structural genomics; NMR {Thermotoga maritima} SCOP: d.68.3.3
Probab=47.26 E-value=47 Score=27.50 Aligned_cols=56 Identities=21% Similarity=0.275 Sum_probs=43.6
Q ss_pred EEEEeCCCCChhhHHHHHHhhhCCCCeeEEEEEeccCEEEEEECCCCCCHHHHHHHhHhcCcchhh
Q 004259 48 IQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEI 113 (765)
Q Consensus 48 ~~~~i~gm~C~~C~~~Ie~~l~~~~Gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~ 113 (765)
.++...|+.|+.-.-+..+++++++. .+.+.+..+++ .....+....+..||....
T Consensus 27 ~~LD~rGl~CP~Pvl~tkkaL~~l~~---------Ge~L~Vl~dd~-~a~~dI~~~~~~~G~~v~~ 82 (98)
T 1jdq_A 27 KTLDVRGEVCPVPDVETKRALQNMKP---------GEILEVWIDYP-MSKERIPETVKKLGHEVLE 82 (98)
T ss_dssp EEEECSSCCSSHHHHHHHHHHHTCCT---------TCEEEEEESSC-THHHHHHHHHHHSSCCEEE
T ss_pred EEEeCCCCCCCHHHHHHHHHHHhCCC---------CCEEEEEECCc-cHHHHHHHHHHHCCCEEEE
Confidence 57999999999999999999999762 33455555554 4467888889999998643
No 118
>3e0m_A Peptide methionine sulfoxide reductase MSRA/MSRB 1; fusion, msrab, linker, hinge, cell membrane, membrane, multifunctional enzyme, oxidoreductase; 2.40A {Streptococcus pneumoniae}
Probab=45.77 E-value=23 Score=35.96 Aligned_cols=50 Identities=20% Similarity=0.238 Sum_probs=38.6
Q ss_pred cccchhhhHHHHhhhccCCCceEEEeecCC-----------------CeEEEEecCCCCChhhHHHhhhh
Q 004259 210 GVLCELDAHFLEGILSNFKGVRQFRFDKIS-----------------GELEVLFDPEALSSRSLVDGIAG 262 (765)
Q Consensus 210 gm~c~~ca~~ie~~l~~~~GV~~v~vn~~~-----------------~~~~V~ydp~~i~~~~i~~~i~~ 262 (765)
++-|=.| +|..+..++||.++.+-.++ +.+.|.|||..++.++|++..=.
T Consensus 8 agGCFWg---~E~~F~~l~GV~~t~~GYagG~~~nPtY~~Vc~TGHaEaV~V~yDp~~isy~~LL~~f~~ 74 (313)
T 3e0m_A 8 AGGCFWG---LEEYFSRISGVLETSVGYANGQVETTNYQLLKETDHAETVQVIYDEKEVSLREILLYYFR 74 (313)
T ss_dssp ECSCHHH---HHHHHTTSTTEEEEEEEEESCSSSCCCTTTHHHHTCEEEEEEEECTTTSCHHHHHHHHHH
T ss_pred ecCCchh---hHHHHhhCCCeEEeecccCCCCCCCCChhhhccCCCeEEEEEEECCCcCCHHHHHHHHHh
Confidence 3444444 67788899999999976554 35899999999999999986543
No 119
>2x3d_A SSO6206; unknown function; 2.70A {Sulfolobus solfataricus}
Probab=44.98 E-value=53 Score=26.81 Aligned_cols=53 Identities=19% Similarity=0.228 Sum_probs=41.8
Q ss_pred HHHHHhhhcCCCCeeeEEee-----eccCeEEEEeCCCCCCHHHHHHHHHhcCCceeE
Q 004259 143 VNSVEGILRGLPGVKRAVVA-----LATSLGEVEYDPTVISKDDIANAIEDAGFEASF 195 (765)
Q Consensus 143 ~~~Ie~~l~~~~GV~~~~vn-----~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~ 195 (765)
.-.+-+.|.+++||..+++. -.+..+.++.....++.+++.++|++.|-.++-
T Consensus 20 ivd~A~~l~~~~gV~gVnItv~EvD~eTe~lkItIEG~~idfd~I~~~IE~~Gg~IHS 77 (96)
T 2x3d_A 20 IVDLAERISKLDGVEGVNISVTDMDVETMGLMIIIEGTSLNFDDIRKMLEEEGCAIHS 77 (96)
T ss_dssp HHHHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEESSCCHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcCCeEEe
Confidence 34567788999999887754 466677777777779999999999999987664
No 120
>2raq_A Conserved protein MTH889; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 3.11A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: d.58.61.1
Probab=44.70 E-value=53 Score=26.89 Aligned_cols=68 Identities=21% Similarity=0.084 Sum_probs=48.7
Q ss_pred ceeceeecccccchhhHHHHHhhhcCCCCeeeEEee-----eccCeEEEEeCCCCCCHHHHHHHHHhcCCceeE
Q 004259 127 TIVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVA-----LATSLGEVEYDPTVISKDDIANAIEDAGFEASF 195 (765)
Q Consensus 127 ~~~~~~~i~gm~C~~C~~~Ie~~l~~~~GV~~~~vn-----~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~ 195 (765)
.+++.+.+-..+-++ .-.+-+.|.+++||..+++. -.+..+.++.....++.++|.++|+++|-.++-
T Consensus 6 irRlVLDVlKPh~p~-i~d~A~~l~~~~gV~gVnItv~EvD~eTe~lkitiEG~~id~d~I~~~IE~~Gg~IHS 78 (97)
T 2raq_A 6 LIRIVLDILKPHEPI-IPEYAKYLSELRGVEGVNITLMEIDKETENIKVTIQGNDLDFDEITRAIESYGGSIHS 78 (97)
T ss_dssp EEEEEEEEECCSCSC-HHHHHHHHHHSTTCCEEEEEEEEECSSCEEEEEEEECSSCCHHHHHHHHHHTTCEEEE
T ss_pred ceEEEEEecCCCCCC-HHHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcCCeEEe
Confidence 344455554443333 34566778889998877644 467778888877889999999999999987664
No 121
>3bpd_A Uncharacterized protein; heptamer, Mg+2 ION, PSI-2, NYSGXRC, structural genom protein structure initiative; 2.80A {Archaeoglobus fulgidus dsm 4304} SCOP: d.58.61.1
Probab=43.61 E-value=22 Score=29.18 Aligned_cols=67 Identities=15% Similarity=-0.049 Sum_probs=47.0
Q ss_pred eeceeecccccchhhHHHHHhhhcCCCCeeeEEee-----eccCeEEEEeCCCCCCHHHHHHHHHhcCCceeE
Q 004259 128 IVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVA-----LATSLGEVEYDPTVISKDDIANAIEDAGFEASF 195 (765)
Q Consensus 128 ~~~~~~i~gm~C~~C~~~Ie~~l~~~~GV~~~~vn-----~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~ 195 (765)
+++.+.+-..+-++ .-.+-+.|.+++||..+++. -.+..+.++.....++.++|.++|+++|-.++-
T Consensus 7 RRlVLDVlKPh~P~-ivdlA~~l~~~~gV~gVnItV~EvD~eTe~lkItIEG~dIdfd~I~~~IE~~GgvIHS 78 (100)
T 3bpd_A 7 RRLVLDVLKPHEPK-TIVFALKLSELENVDGVNIHLSEIDQATENIKITILGNNLDYEQIKGVIEDMGGVIHS 78 (100)
T ss_dssp EEEEEEEEEESCSC-HHHHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEEEEECHHHHHHHHHTTTCEEEE
T ss_pred eEEEEEecCCCCCC-HHHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcCCeEEe
Confidence 44444444433332 34567888999999887754 456677777766678999999999999977653
No 122
>1je3_A EC005, hypothetical 8.6 kDa protein in AMYA-FLIE intergenic region; mixed alpha-beta structure, structural genomics; NMR {Escherichia coli} SCOP: d.68.3.3
Probab=42.70 E-value=71 Score=26.34 Aligned_cols=68 Identities=16% Similarity=0.129 Sum_probs=46.3
Q ss_pred ceeecccccchhhHHHHHhhhcCCCCeeeEEeeeccCeEEEEeCCCCCCHHHHHHHHHhcCCceeEeecCCcceeEEEE
Q 004259 130 GQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASFVQSSGQDKILLQV 208 (765)
Q Consensus 130 ~~~~i~gm~C~~C~~~Ie~~l~~~~GV~~~~vn~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~~~~~~~~~~i 208 (765)
..+...|+.|+.-.-+..++|++++. .+.+.|..|.. ...++|.+.++..||........ .+.+++.|
T Consensus 28 ~~LD~rGl~CP~PvlktkkaL~~l~~---------Ge~L~Vl~dd~-~a~~dIp~~~~~~G~~v~~~e~~-~~~~~i~I 95 (97)
T 1je3_A 28 YRLDMVGEPCPYPAVATLEAMPQLKK---------GEILEVVSDCP-QSINNIPLDARNHGYTVLDIQQD-GPTIRYLI 95 (97)
T ss_dssp EEECSBCCSSSSSTHHHHHHTTTCCS---------SCEEEEEEBCS-SSSCHHHHHHHHHTCSEEEEEEC-SSSEEEEE
T ss_pred eEEeCCCCCCCHHHHHHHHHHHcCCC---------CCEEEEEECCc-chHHHHHHHHHHCCCEEEEEEee-CCEEEEEE
Confidence 46889999999999999999998753 22233343332 34578889999999998653332 33444444
No 123
>1je3_A EC005, hypothetical 8.6 kDa protein in AMYA-FLIE intergenic region; mixed alpha-beta structure, structural genomics; NMR {Escherichia coli} SCOP: d.68.3.3
Probab=41.22 E-value=42 Score=27.77 Aligned_cols=56 Identities=18% Similarity=0.190 Sum_probs=42.5
Q ss_pred EEEEEeCCCCChhhHHHHHHhhhCCCCeeEEEEEeccCEEEEEECCCCCCHHHHHHHhHhcCcchh
Q 004259 47 RIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAE 112 (765)
Q Consensus 47 ~~~~~i~gm~C~~C~~~Ie~~l~~~~Gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~ 112 (765)
..++...|+.|+.-.-+..+++++++. .+.+.+..+++ .....+....+..||...
T Consensus 27 ~~~LD~rGl~CP~PvlktkkaL~~l~~---------Ge~L~Vl~dd~-~a~~dIp~~~~~~G~~v~ 82 (97)
T 1je3_A 27 DYRLDMVGEPCPYPAVATLEAMPQLKK---------GEILEVVSDCP-QSINNIPLDARNHGYTVL 82 (97)
T ss_dssp EEEECSBCCSSSSSTHHHHHHTTTCCS---------SCEEEEEEBCS-SSSCHHHHHHHHHTCSEE
T ss_pred CeEEeCCCCCCCHHHHHHHHHHHcCCC---------CCEEEEEECCc-chHHHHHHHHHHCCCEEE
Confidence 357999999999999999999999762 33455555544 345678888889999864
No 124
>2l69_A Rossmann 2X3 fold protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=35.45 E-value=1.1e+02 Score=24.58 Aligned_cols=83 Identities=12% Similarity=0.165 Sum_probs=49.2
Q ss_pred EEEEeCCCCCCHHHHHHHHHhcCCceeEeecCCcceeEEEEecccchhhhHHHHhhhccCCCceEEEe------------
Q 004259 168 GEVEYDPTVISKDDIANAIEDAGFEASFVQSSGQDKILLQVTGVLCELDAHFLEGILSNFKGVRQFRF------------ 235 (765)
Q Consensus 168 ~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~~~~~~~~~~i~gm~c~~ca~~ie~~l~~~~GV~~v~v------------ 235 (765)
+.+.|..+..+.+++.+.|++.||++....+. ......||+.+...+.-.-+.+
T Consensus 4 vivvfstdeetlrkfkdiikkngfkvrtvrsp--------------qelkdsieelvkkynativvvvvddkewaekair 69 (134)
T 2l69_A 4 VIVVFSTDEETLRKFKDIIKKNGFKVRTVRSP--------------QELKDSIEELVKKYNATIVVVVVDDKEWAEKAIR 69 (134)
T ss_dssp EEEECCCCHHHHHHHHHHHHHTTCEEEEECSH--------------HHHHHHHHHHTTCCCCEEEEEECSSHHHHHHHHH
T ss_pred EEEEEeCCHHHHHHHHHHHHhcCceEEEecCH--------------HHHHHHHHHHHHHhCCeEEEEEEccHHHHHHHHH
Confidence 34555555556778888999999998764431 1222334444433332211111
Q ss_pred ---ecCCCeEEEEecCCCCChhhHHHhhhhcC
Q 004259 236 ---DKISGELEVLFDPEALSSRSLVDGIAGRS 264 (765)
Q Consensus 236 ---n~~~~~~~V~ydp~~i~~~~i~~~i~~~g 264 (765)
++...-+.+-||...-..+++-+.+.+.|
T Consensus 70 fvkslgaqvliiiydqdqnrleefsrevrrrg 101 (134)
T 2l69_A 70 FVKSLGAQVLIIIYDQDQNRLEEFSREVRRRG 101 (134)
T ss_dssp HHHHHCCCCEEEEECSCHHHHHHHHHHHHHTT
T ss_pred HHHhcCCeEEEEEEeCchhHHHHHHHHHHhcC
Confidence 23345677888888777777888888877
No 125
>3ne5_A Cation efflux system protein CUSA; transmembrane helix, metal transport; 2.90A {Escherichia coli} PDB: 3k07_A 3k0i_A 3kso_A 3kss_A 3t53_A 3t51_A 3t56_A 4dop_A 4dnt_A
Probab=34.27 E-value=6.2e+02 Score=30.28 Aligned_cols=130 Identities=13% Similarity=0.131 Sum_probs=72.0
Q ss_pred hHHHHHHhhhCCCCeeEEEEEecc------------CEEEEEECCCC-----CCHHHHHHHhHhc-Ccchhhhc--cc--
Q 004259 60 CSNSVEGALMGLKGVAKASVALLQ------------NKADVVFDPDL-----VKDEDIKNAIEDA-GFEAEILA--ES-- 117 (765)
Q Consensus 60 C~~~Ie~~l~~~~Gv~~~~v~~~~------------~~~~v~~~~~~-----~~~~~i~~~i~~~-Gy~~~~~~--~~-- 117 (765)
-..++|+.+++.|+|.++...... ....+..++.. .+.+++.+.+++. .+.-.... .+
T Consensus 595 ~~~~ie~~l~~~p~V~~v~s~~G~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~l~~~lr~~~~~p~~~~~~~~~~~ 674 (1054)
T 3ne5_A 595 MLQKTDKLIMSVPEVARVFGKTGKAETATDSAPLEMVETTIQLKPQEQWRPGMTMDKIIEELDNTVRLPGLANLWVPPIR 674 (1054)
T ss_dssp HHHHHHHHHHTSTTEEEEEEEEECCSSTTCCCCTTCBCEEEEECCTTTSCSSCCHHHHHHHHHHHSCCTTCBCCEECHHH
T ss_pred HHHHHHHHHhcCCCeEEEEEEecCCCCCCCCCCcceEEEEEEecchhhccccCCHHHHHHHHHHHcCCCCceeeeccccc
Confidence 457899999999999988765432 23445544321 2456666665543 11100000 00
Q ss_pred -CCCCCCCCcceeceeecccccchh---hHHHHHhhhcCCCCeeeEEeeeccCeE--EEEeCCC-----CCCHHHHHHHH
Q 004259 118 -STSGPKPQGTIVGQYTIGGMTCAA---CVNSVEGILRGLPGVKRAVVALATSLG--EVEYDPT-----VISKDDIANAI 186 (765)
Q Consensus 118 -~~~~~~~~~~~~~~~~i~gm~C~~---C~~~Ie~~l~~~~GV~~~~vn~~~~~~--~v~~~~~-----~~~~~~i~~~i 186 (765)
.......+....+.+.+.|-+=.. =+..+++.+++.||+.++..+...+.- .+..|+. .++.+++.+.+
T Consensus 675 ~~~~~~~~g~~~~i~i~l~G~d~~~L~~~a~~l~~~l~~~~gv~~v~~~~~~~~~~l~i~id~~~a~~~Gls~~~v~~~l 754 (1054)
T 3ne5_A 675 NRIDMLSTGIKSPIGIKVSGTVLADIDAMAEQIEEVARTVPGVASALAERLEGGRYINVEINREKAARYGMTVADVQLFV 754 (1054)
T ss_dssp HHHHHHHTSCSSSEEEEEECSCHHHHHHHHHHHHHHHHHSTTCSEEEECCSSCEEEEEEEECHHHHHTTTCCHHHHHHHH
T ss_pred cccccccCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHhcCCCceEeeccccCCCeeEEEEECHHHHHHcCCCHHHHHHHH
Confidence 000000000122455666643332 256788899999999999887665554 4444442 26788888888
Q ss_pred Hhc
Q 004259 187 EDA 189 (765)
Q Consensus 187 ~~~ 189 (765)
+..
T Consensus 755 ~~~ 757 (1054)
T 3ne5_A 755 TSA 757 (1054)
T ss_dssp HTT
T ss_pred HHH
Confidence 865
No 126
>2jsx_A Protein NAPD; TAT, proofreading, cytoplasm, chaperone; NMR {Escherichia coli K12} PDB: 2pq4_A
Probab=33.65 E-value=1.6e+02 Score=24.04 Aligned_cols=33 Identities=15% Similarity=0.158 Sum_probs=18.8
Q ss_pred eeEEEEecccchhhhHHHHhhhccCCCceEEEee
Q 004259 203 KILLQVTGVLCELDAHFLEGILSNFKGVRQFRFD 236 (765)
Q Consensus 203 ~~~~~i~gm~c~~ca~~ie~~l~~~~GV~~v~vn 236 (765)
++-+.+++-+...-.+.+ +.++++|||.++..-
T Consensus 43 kiVV~iEa~~~~~l~~~i-~~I~~i~GVlst~lv 75 (95)
T 2jsx_A 43 QLIVVVEAEDSETLIQTI-ESVRNVEGVLAVSLV 75 (95)
T ss_dssp EEEEEEEESSHHHHHHHH-HHHTTSTTEEEEEES
T ss_pred CEEEEEEeCCHHHHHHHH-HHHhcCCCccEEeEE
Confidence 333334433333333444 567889999888753
No 127
>3pim_A Peptide methionine sulfoxide reductase; methionine-S-sulfoxide reductase, oxidoreductase; 1.90A {Saccharomyces cerevisiae} PDB: 3pil_A 3pin_B
Probab=33.34 E-value=22 Score=33.22 Aligned_cols=51 Identities=16% Similarity=0.272 Sum_probs=36.5
Q ss_pred ecccchhhhHHHHhhhccC--CCceEEEeecCC-------------------------CeEEEEecCCCCChhhHHHhhh
Q 004259 209 TGVLCELDAHFLEGILSNF--KGVRQFRFDKIS-------------------------GELEVLFDPEALSSRSLVDGIA 261 (765)
Q Consensus 209 ~gm~c~~ca~~ie~~l~~~--~GV~~v~vn~~~-------------------------~~~~V~ydp~~i~~~~i~~~i~ 261 (765)
-++-|=.| +|..+..+ +||.++.+-.++ +.+.|.|||..++.++|++..=
T Consensus 24 fagGCFWg---~E~~F~~l~g~GV~~t~~GYagG~~~~~n~~~~PtY~~Vc~g~TGHaEaV~V~yDp~~isy~~LL~~Ff 100 (187)
T 3pim_A 24 LACGCFWG---TEHMYRKYLNDRIVDCKVGYANGEESKKDSPSSVSYKRVCGGDTDFAEVLQVSYNPKVITLRELTDFFF 100 (187)
T ss_dssp EESSCHHH---HHHHHHHHHGGGSSEEEEEEEEECCC---------CSCBTTBCTTCEEEEEEEECTTTSCHHHHHHHHT
T ss_pred EecCCchh---hHHHHHHhcCCCeEEEEeeecCCcccCCCCCCCCchhhhccCCCCCeEEEEEEECCccCCHHHHHHHHH
Confidence 35556666 45566666 889888764332 3488999999999999998764
Q ss_pred h
Q 004259 262 G 262 (765)
Q Consensus 262 ~ 262 (765)
.
T Consensus 101 ~ 101 (187)
T 3pim_A 101 R 101 (187)
T ss_dssp T
T ss_pred H
Confidence 4
No 128
>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp}
Probab=30.56 E-value=39 Score=39.11 Aligned_cols=87 Identities=13% Similarity=0.121 Sum_probs=45.9
Q ss_pred hHHHHHHHHHHhccCCCh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCcchHHHHHHHHhheeee
Q 004259 529 VLSQIISLVETAQMSKAP-IQKFADFVASIFVPIVVTLALFTWLCWYVAGVLGAYPEQWLPENGTHFVFALMFSISVVVI 607 (765)
Q Consensus 529 ~~~~i~~~~~~~~~~k~~-~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vlv~ 607 (765)
.+.++++..+..+.+-.. ..+....+....+.+.+ ++++.+.++...... ...+..++...+...-.
T Consensus 317 ~I~~lv~~a~~~k~~~q~~~d~~a~~~v~~vl~ia~-~~~~~w~~~~~~~~~-----------~~~l~~ai~vlviacPc 384 (736)
T 3rfu_A 317 RIVQMVSDAQRSRAPIQRLADTVSGWFVPAVILVAV-LSFIVWALLGPQPAL-----------SYGLIAAVSVLIIACPC 384 (736)
T ss_dssp HHHHHHHHHHSSCCCCCCHHHHHHHHHHHHHHHHHH-HHHHHHHHHCSSSST-----------THHHHHHHHHHHHHCCS
T ss_pred HHHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCCCchH-----------HHHHHHHHHhHHHhhhh
Confidence 345666666655555433 44555555554444444 444444443210000 01234455555666677
Q ss_pred cccchhhhhHHHHHHHHHHH
Q 004259 608 ACPCALGLATPTAVMVATGV 627 (765)
Q Consensus 608 ~~P~al~la~p~~~~~~~~~ 627 (765)
+.|.+.++++-.+...+.++
T Consensus 385 aL~la~p~a~~~~~~~~a~~ 404 (736)
T 3rfu_A 385 ALGLATPMSIMVGVGKGAQS 404 (736)
T ss_dssp THHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHhhc
Confidence 78888888888877766554
No 129
>2jmz_A Hypothetical protein MJ0781; unknown function; NMR {Methanocaldococcus jannaschii} PDB: 2jnq_A
Probab=30.44 E-value=40 Score=31.47 Aligned_cols=27 Identities=26% Similarity=0.396 Sum_probs=21.9
Q ss_pred eeEEeeccCcCCCCEEEEcCCCccCcc
Q 004259 450 EEREIDALLIQSGDTLKVLPGTKLPAD 476 (765)
Q Consensus 450 ~~~~i~~~~l~~GDiv~v~~Ge~iP~D 476 (765)
+..++++++|++||.|.+..|..++.|
T Consensus 112 ~~~w~~A~eLk~GD~v~~~~~~~~~~~ 138 (186)
T 2jmz_A 112 EVLEINAEMVKVGDYIYIPKNNTINLD 138 (186)
T ss_dssp EEEEEEGGGCCTTSEEEEECSSSEEEE
T ss_pred eEEEEEhhcCCCCCEEEecccCCccce
Confidence 567899999999999999876655544
No 130
>1pav_A Hypothetical protein TA1170/TA1414; structural genomics, structure, fast NMR, semiautomated analysis; NMR {Thermoplasma acidophilum} SCOP: d.68.3.3
Probab=30.39 E-value=51 Score=25.74 Aligned_cols=55 Identities=15% Similarity=0.025 Sum_probs=40.5
Q ss_pred eeecccccchhhHHHHHhhhcCCCCeeeEEeeeccCeEEEEeCCCCCCHHHHHHHHHhcCCceeE
Q 004259 131 QYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASF 195 (765)
Q Consensus 131 ~~~i~gm~C~~C~~~Ie~~l~~~~GV~~~~vn~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~ 195 (765)
.+...|+.|+.=.-+..++|++++.- +.+.|..|.. ...++|.+.+++.||....
T Consensus 8 ~lD~rGl~CP~Pvl~~k~al~~l~~G---------~~L~V~~dd~-~a~~di~~~~~~~G~~~~~ 62 (78)
T 1pav_A 8 VIDARGSYCPGPLMELIKAYKQAKVG---------EVISVYSTDA-GTKKDAPAWIQKSGQELVG 62 (78)
T ss_dssp CCCBSSCSSCTTHHHHHHHHTTSCTT---------CCEECCBSSS-CHHHHHHHHHHHHTEEECC
T ss_pred EEECCCCCCCHHHHHHHHHHHcCCCC---------CEEEEEECCc-cHHHHHHHHHHHCCCEEEE
Confidence 57888999999999999999987532 2233333322 3468899999999998754
No 131
>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}
Probab=27.35 E-value=23 Score=32.53 Aligned_cols=24 Identities=33% Similarity=0.562 Sum_probs=18.8
Q ss_pred hhhcCCcEEEecCCCccccCceEE
Q 004259 642 ERAQKIKYVIFDKTGTLTQGRATV 665 (765)
Q Consensus 642 e~lg~v~~i~fDKTGTLT~g~~~v 665 (765)
|++.+++.|+||--||||.+...+
T Consensus 4 ~~~~~ikliv~D~DGtL~d~~~~~ 27 (168)
T 3ewi_A 4 EKLKEIKLLVCNIDGCLTNGHIYV 27 (168)
T ss_dssp ---CCCCEEEEECCCCCSCSCCBC
T ss_pred hhHhcCcEEEEeCccceECCcEEE
Confidence 677889999999999999997643
No 132
>3hz7_A Uncharacterized protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Desulfitobacterium hafniense}
Probab=27.31 E-value=1e+02 Score=24.66 Aligned_cols=67 Identities=19% Similarity=0.333 Sum_probs=46.9
Q ss_pred eeecccccchhhHHHHHhhhcCCC--CeeeEEeeeccCeEEEEeCCCCCCHHHHHHHHHhcCCceeEeecCCcceeEEEE
Q 004259 131 QYTIGGMTCAACVNSVEGILRGLP--GVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASFVQSSGQDKILLQV 208 (765)
Q Consensus 131 ~~~i~gm~C~~C~~~Ie~~l~~~~--GV~~~~vn~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~~~~~~~~~~i 208 (765)
.+...|+.|+.-.-+..++|++++ | +.+.|..|.. ...++|.+..++.||.+.... .+.+.+++.|
T Consensus 3 ~lD~rGl~CP~Pvl~~kkal~~l~~~G----------~~L~V~~dd~-~a~~dI~~~~~~~G~~v~~~~-~~~g~~~i~I 70 (87)
T 3hz7_A 3 TIDALGQVCPIPVIRAKKALAELGEAG----------GVVTVLVDND-ISRQNLQKMAEGMGYQSEYLE-KDNGVIEVTI 70 (87)
T ss_dssp EEECTTCCTTHHHHHHHHHHHTTGGGC----------CEEEEEESSH-HHHHHHHHHHHHHTCEEEEEE-CGGGCEEEEE
T ss_pred EEEcCCCCCCHHHHHHHHHHHhccCCC----------CEEEEEECCc-cHHHHHHHHHHHCCCEEEEEE-ecCCEEEEEE
Confidence 366789999999999999999883 4 2233343322 356789999999999986543 2345566666
Q ss_pred e
Q 004259 209 T 209 (765)
Q Consensus 209 ~ 209 (765)
.
T Consensus 71 ~ 71 (87)
T 3hz7_A 71 V 71 (87)
T ss_dssp E
T ss_pred E
Confidence 4
No 133
>1pav_A Hypothetical protein TA1170/TA1414; structural genomics, structure, fast NMR, semiautomated analysis; NMR {Thermoplasma acidophilum} SCOP: d.68.3.3
Probab=25.46 E-value=38 Score=26.53 Aligned_cols=54 Identities=17% Similarity=0.081 Sum_probs=40.5
Q ss_pred EEEeCCCCChhhHHHHHHhhhCCCCeeEEEEEeccCEEEEEECCCCCCHHHHHHHhHhcCcchh
Q 004259 49 QVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAE 112 (765)
Q Consensus 49 ~~~i~gm~C~~C~~~Ie~~l~~~~Gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~ 112 (765)
++...|+.|+.-.-+..+++++++. .+.+.+..+++ .....+.......||...
T Consensus 8 ~lD~rGl~CP~Pvl~~k~al~~l~~---------G~~L~V~~dd~-~a~~di~~~~~~~G~~~~ 61 (78)
T 1pav_A 8 VIDARGSYCPGPLMELIKAYKQAKV---------GEVISVYSTDA-GTKKDAPAWIQKSGQELV 61 (78)
T ss_dssp CCCBSSCSSCTTHHHHHHHHTTSCT---------TCCEECCBSSS-CHHHHHHHHHHHHTEEEC
T ss_pred EEECCCCCCCHHHHHHHHHHHcCCC---------CCEEEEEECCc-cHHHHHHHHHHHCCCEEE
Confidence 5788999999999999999998752 23344444443 346788888899999863
No 134
>2x3d_A SSO6206; unknown function; 2.70A {Sulfolobus solfataricus}
Probab=25.41 E-value=1e+02 Score=25.17 Aligned_cols=52 Identities=13% Similarity=0.260 Sum_probs=39.8
Q ss_pred HHHHHHhhhCCCCeeEEEEE-----eccCEEEEEECCCCCCHHHHHHHhHhcCcchh
Q 004259 61 SNSVEGALMGLKGVAKASVA-----LLQNKADVVFDPDLVKDEDIKNAIEDAGFEAE 112 (765)
Q Consensus 61 ~~~Ie~~l~~~~Gv~~~~v~-----~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~ 112 (765)
.-.+.+.+.+++||..+++. ..+....+.......+.+++.+++++.|....
T Consensus 20 ivd~A~~l~~~~gV~gVnItv~EvD~eTe~lkItIEG~~idfd~I~~~IE~~Gg~IH 76 (96)
T 2x3d_A 20 IVDLAERISKLDGVEGVNISVTDMDVETMGLMIIIEGTSLNFDDIRKMLEEEGCAIH 76 (96)
T ss_dssp HHHHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEESSCCHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcCCeEE
Confidence 34567789999999998764 45556666666666889999999999997653
No 135
>2f40_A Hypothetical protein PF1455; protein structure prediction, residual dipolar couplings, PY furious, simulated annealing, structural genomics; NMR {Pyrococcus furiosus} SCOP: i.11.1.1
Probab=24.78 E-value=68 Score=25.60 Aligned_cols=50 Identities=16% Similarity=0.161 Sum_probs=43.9
Q ss_pred cchhhhHHHHhhhccCCCceEEEeecCCCeEEEEecCCCCChhhHHHhhh
Q 004259 212 LCELDAHFLEGILSNFKGVRQFRFDKISGELEVLFDPEALSSRSLVDGIA 261 (765)
Q Consensus 212 ~c~~ca~~ie~~l~~~~GV~~v~vn~~~~~~~V~ydp~~i~~~~i~~~i~ 261 (765)
-....|...+..|..-++|..+=+|.-.....|.||++..+.+++++.++
T Consensus 18 It~EeA~~~QYeL~k~~avyRvFiNgYAk~g~ViFDe~kl~~e~lLeelk 67 (96)
T 2f40_A 18 LTPEEAKIVQYELSTRDEFYRVFINPYAKVAEVVIDDSKVNIEELKEKLK 67 (96)
T ss_dssp CTTTTTHHHHHTTTTTTTBCCCCCCTTTTCCEEECCBCSCSHHHHHHHTT
T ss_pred CCHHHHHHHHHHhhcchhhhhheeccccccceEEECcccCCHHHHHHHcC
Confidence 34556788889999999999999999999999999999999999999554
No 136
>2raq_A Conserved protein MTH889; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 3.11A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: d.58.61.1
Probab=23.66 E-value=1.1e+02 Score=25.11 Aligned_cols=68 Identities=19% Similarity=0.218 Sum_probs=48.4
Q ss_pred CceEEEEEeCCCCChhhHHHHHHhhhCCCCeeEEEEE-----eccCEEEEEECCCCCCHHHHHHHhHhcCcchh
Q 004259 44 GMRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVA-----LLQNKADVVFDPDLVKDEDIKNAIEDAGFEAE 112 (765)
Q Consensus 44 ~~~~~~~~i~gm~C~~C~~~Ie~~l~~~~Gv~~~~v~-----~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~ 112 (765)
+.+++.+.+--.+ ..-.-.+.+.|.+++||..+++. ..+....+.......+.+++.+++++.|....
T Consensus 5 ~irRlVLDVlKPh-~p~i~d~A~~l~~~~gV~gVnItv~EvD~eTe~lkitiEG~~id~d~I~~~IE~~Gg~IH 77 (97)
T 2raq_A 5 GLIRIVLDILKPH-EPIIPEYAKYLSELRGVEGVNITLMEIDKETENIKVTIQGNDLDFDEITRAIESYGGSIH 77 (97)
T ss_dssp SEEEEEEEEECCS-CSCHHHHHHHHHHSTTCCEEEEEEEEECSSCEEEEEEEECSSCCHHHHHHHHHHTTCEEE
T ss_pred CceEEEEEecCCC-CCCHHHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcCCeEE
Confidence 3455666665332 23334567788899999888764 46666777777777899999999999997653
No 137
>1xhj_A Nitrogen fixation protein NIFU; alpha-beta, NIFU-like, structural genomics, protein structur initiative, NESG, PSI; NMR {Staphylococcus epidermidis} SCOP: d.52.8.1
Probab=23.62 E-value=57 Score=26.45 Aligned_cols=53 Identities=17% Similarity=0.388 Sum_probs=32.3
Q ss_pred HHHHHhHhcCcchhhhcccCCCCCCCCcceeceeecccccchhhHH-------HHHhhhc-CCCCeeeEEe
Q 004259 99 DIKNAIEDAGFEAEILAESSTSGPKPQGTIVGQYTIGGMTCAACVN-------SVEGILR-GLPGVKRAVV 161 (765)
Q Consensus 99 ~i~~~i~~~Gy~~~~~~~~~~~~~~~~~~~~~~~~i~gm~C~~C~~-------~Ie~~l~-~~~GV~~~~v 161 (765)
+++-.+...|-++++.+-. . ..+.++..| .|.+|.. -||+.|+ .+|.|..+..
T Consensus 18 ~IRP~L~~dGGdvelv~v~-------~--g~V~V~L~G-aC~gCpss~~TLk~gIE~~L~~~vPev~~V~~ 78 (88)
T 1xhj_A 18 RLRPFLLRDGGDCTLVDVE-------D--GIVKLQLHG-ACGTCPSSTITLKAGIERALHEEVPGVIEVEQ 78 (88)
T ss_dssp HHHHHHHHHSCEEEEEECC-------S--SEEEEEEES-SCCSSCHHHHHHHHHHHHHHHHHSTTCCEEEE
T ss_pred HhcHHHHhcCCeEEEEEEE-------C--CEEEEEEee-cCCCCcchHHHHHHHHHHHHHHhCCCceEEEe
Confidence 3555556666666654431 1 245677777 6888842 4777776 4788877654
No 138
>1gtd_A MTH169; synthetase, FGAM synthetase, purine synthesis pathway, PSI, protein structure initiative, NESG; 2.56A {Methanobacterium thermoautotrophicum} SCOP: d.284.1.1
Probab=23.53 E-value=2.8e+02 Score=21.99 Aligned_cols=68 Identities=12% Similarity=0.117 Sum_probs=40.8
Q ss_pred eEEEEeCCCCCCHH--HHHHHHHhcCCceeEeecCCcceeEEEEecccch---hhhHHHHhhhccCCCceEEEee
Q 004259 167 LGEVEYDPTVISKD--DIANAIEDAGFEASFVQSSGQDKILLQVTGVLCE---LDAHFLEGILSNFKGVRQFRFD 236 (765)
Q Consensus 167 ~~~v~~~~~~~~~~--~i~~~i~~~Gy~~~~~~~~~~~~~~~~i~gm~c~---~ca~~ie~~l~~~~GV~~v~vn 236 (765)
++.|.+.|+..+++ .+..++..+||.+.-... ...+.+.+++-+.. .....+-+.|..-|-+.+.+++
T Consensus 6 ~V~V~lK~gVlDpqG~av~~al~~LG~~v~~VR~--gK~~~l~~~~~~~~~a~~~v~~~~~~LLaNpVie~~~~~ 78 (85)
T 1gtd_A 6 EVRIRLKKGMLNPEAATIERALALLGYEVEDTDT--TDVITFTMDEDSLEAVEREVEDMCQRLLCNPVIHDYDVS 78 (85)
T ss_dssp EEEEEECTTSCCHHHHHHHHHHHHHTCCCEEEEE--EEEEEEEECCSCHHHHHHHHHHHHHHTTCCTTTEEEEEE
T ss_pred EEEEEECCCCcCcHHHHHHHHHHHcCCChheEEE--EEEEEEEecCCCHHHHHHHHHHHHHHhcCCCcceEEEEE
Confidence 56788888888775 688899999995543322 23344555544332 3344555555555666665543
No 139
>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A
Probab=23.13 E-value=48 Score=30.76 Aligned_cols=26 Identities=42% Similarity=0.730 Sum_probs=21.5
Q ss_pred hHHhhhcCCcEEEecCCCccccCceE
Q 004259 639 DALERAQKIKYVIFDKTGTLTQGRAT 664 (765)
Q Consensus 639 ~~le~lg~v~~i~fDKTGTLT~g~~~ 664 (765)
+..+.+.+++.|+||--|||+.+...
T Consensus 11 ~~~~~~~~ik~vifD~DGTL~d~~~~ 36 (189)
T 3mn1_A 11 DLMQRGKAIKLAVFDVDGVLTDGRLY 36 (189)
T ss_dssp HHHHHHHTCCEEEECSTTTTSCSEEE
T ss_pred HHHHHHHhCCEEEEcCCCCcCCccEe
Confidence 45567788999999999999998543
No 140
>3bpd_A Uncharacterized protein; heptamer, Mg+2 ION, PSI-2, NYSGXRC, structural genom protein structure initiative; 2.80A {Archaeoglobus fulgidus dsm 4304} SCOP: d.58.61.1
Probab=23.05 E-value=73 Score=26.15 Aligned_cols=66 Identities=20% Similarity=0.175 Sum_probs=44.8
Q ss_pred ceEEEEEeCCCCChhhHHHHHHhhhCCCCeeEEEEE-----eccCEEEEEECCCCCCHHHHHHHhHhcCcch
Q 004259 45 MRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVA-----LLQNKADVVFDPDLVKDEDIKNAIEDAGFEA 111 (765)
Q Consensus 45 ~~~~~~~i~gm~C~~C~~~Ie~~l~~~~Gv~~~~v~-----~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~ 111 (765)
.+++.+.+--. -..-.-.+.+.|.+++||..+++. ..+....+.......+.+++.+++++.|...
T Consensus 6 iRRlVLDVlKP-h~P~ivdlA~~l~~~~gV~gVnItV~EvD~eTe~lkItIEG~dIdfd~I~~~IE~~GgvI 76 (100)
T 3bpd_A 6 LRRLVLDVLKP-HEPKTIVFALKLSELENVDGVNIHLSEIDQATENIKITILGNNLDYEQIKGVIEDMGGVI 76 (100)
T ss_dssp EEEEEEEEEEE-SCSCHHHHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEEEEECHHHHHHHHHTTTCEE
T ss_pred ceEEEEEecCC-CCCCHHHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcCCeE
Confidence 34454544422 222334567789999999998764 3555566666555688999999999999765
No 141
>3hz7_A Uncharacterized protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Desulfitobacterium hafniense}
Probab=22.83 E-value=1e+02 Score=24.78 Aligned_cols=53 Identities=23% Similarity=0.443 Sum_probs=40.4
Q ss_pred EEEeCCCCChhhHHHHHHhhhCCC--CeeEEEEEeccCEEEEEECCCCCCHHHHHHHhHhcCcchh
Q 004259 49 QVGVTGMTCAACSNSVEGALMGLK--GVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAE 112 (765)
Q Consensus 49 ~~~i~gm~C~~C~~~Ie~~l~~~~--Gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~ 112 (765)
++...|+.|+.-.-+..+++++++ | ..+.+..+++ .....+.......||...
T Consensus 3 ~lD~rGl~CP~Pvl~~kkal~~l~~~G----------~~L~V~~dd~-~a~~dI~~~~~~~G~~v~ 57 (87)
T 3hz7_A 3 TIDALGQVCPIPVIRAKKALAELGEAG----------GVVTVLVDND-ISRQNLQKMAEGMGYQSE 57 (87)
T ss_dssp EEECTTCCTTHHHHHHHHHHHTTGGGC----------CEEEEEESSH-HHHHHHHHHHHHHTCEEE
T ss_pred EEEcCCCCCCHHHHHHHHHHHhccCCC----------CEEEEEECCc-cHHHHHHHHHHHCCCEEE
Confidence 578899999999999999999973 3 2344444443 446788888899999864
No 142
>2lcj_A PAB POLC intein; hydrolase; NMR {Pyrococcus abyssi}
Probab=22.36 E-value=88 Score=29.03 Aligned_cols=25 Identities=20% Similarity=0.113 Sum_probs=20.7
Q ss_pred eeEEeeccCcCCCCEEEEcCCCccC
Q 004259 450 EEREIDALLIQSGDTLKVLPGTKLP 474 (765)
Q Consensus 450 ~~~~i~~~~l~~GDiv~v~~Ge~iP 474 (765)
....+++++|++||.|.+..++..|
T Consensus 102 ~~~~~~A~eLk~GD~v~v~~~~~~~ 126 (185)
T 2lcj_A 102 RFIEKRAFEVKEGDKVLVSELELVE 126 (185)
T ss_dssp EEEEEEGGGCCTTCEEEECCCCCSC
T ss_pred eEEEEEHHHCCCCCEEEEccccccc
Confidence 4578999999999999998876444
No 143
>2lqj_A Mg2+ transport protein; ACT domain, membrane protein, regulation, HYDR; NMR {Mycobacterium tuberculosis}
Probab=21.78 E-value=96 Score=25.37 Aligned_cols=58 Identities=16% Similarity=0.093 Sum_probs=37.3
Q ss_pred HHHHHHHhcCCceeEeecCC--cceeEEEEecccch---hhhHHHHhhhccCCCceEEEeecC
Q 004259 181 DIANAIEDAGFEASFVQSSG--QDKILLQVTGVLCE---LDAHFLEGILSNFKGVRQFRFDKI 238 (765)
Q Consensus 181 ~i~~~i~~~Gy~~~~~~~~~--~~~~~~~i~gm~c~---~ca~~ie~~l~~~~GV~~v~vn~~ 238 (765)
.+.+.++..+|+..-..+.+ .+++.+...-+... ..-..+-..|...|||.++.++..
T Consensus 26 lL~~~L~~~~~~l~~l~s~~~~~~~veI~A~L~at~~~~~~Le~iv~rLs~ep~V~~a~W~~~ 88 (94)
T 2lqj_A 26 HIVQRTSSNDITLRGIRTGPAGDDNITLTAHLLMVGHTPAKLERLVAELSLQPGVYAVHWYAG 88 (94)
T ss_dssp HHHHHHHHHTEEEEEEEEEECSSSCEEEEEEEEEESCCHHHHHHHHHHHHHSTTEEEEEEEES
T ss_pred HHHHHHhcCCCceeEeeeecCCCCeEEEEEEEEecCCCHHHHHHHHHHHhCCCCeEEEEEEec
Confidence 46778888999887665433 44454444433333 334555566777899999998763
No 144
>3cq1_A Putative uncharacterized protein TTHB138; DTDP-4-keto-L-rhamnose reductase, plasmid, oxidoreductase, structural genomics, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2cu6_A 3cq2_A 3cq3_A*
Probab=20.59 E-value=61 Score=26.87 Aligned_cols=35 Identities=26% Similarity=0.359 Sum_probs=24.0
Q ss_pred ceeecccccchhh---HHHHHhhhcCCCCeeeEEeeec
Q 004259 130 GQYTIGGMTCAAC---VNSVEGILRGLPGVKRAVVALA 164 (765)
Q Consensus 130 ~~~~i~gm~C~~C---~~~Ie~~l~~~~GV~~~~vn~~ 164 (765)
+.+...-..|+.- ...++++|++++||.++++++.
T Consensus 45 v~l~lt~~~cp~~~~l~~~i~~al~~l~gv~~V~V~l~ 82 (103)
T 3cq1_A 45 VRMTLTTPGCPLHDSLGEAVRQALSRLPGVEEVEVEVT 82 (103)
T ss_dssp EEECCSSSSCCSSCHHHHHHHHHHHTSTTCCEEEEEEC
T ss_pred EEEEECCCCCcHHHHHHHHHHHHHHhCCCceeEEEEEe
Confidence 4444444444432 4678999999999999988754
Done!