Query 004261
Match_columns 765
No_of_seqs 487 out of 3218
Neff 8.3
Searched_HMMs 29240
Date Mon Mar 25 19:29:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004261.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004261hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3i6s_A Subtilisin-like proteas 100.0 6E-127 2E-131 1108.4 53.2 633 104-761 1-645 (649)
2 3vta_A Cucumisin; subtilisin-l 100.0 1E-113 4E-118 1000.8 49.2 611 104-760 1-619 (621)
3 1xf1_A C5A peptidase, SCP; hyd 100.0 4.1E-83 1.4E-87 773.3 44.1 539 120-761 4-606 (926)
4 3afg_A Subtilisin-like serine 100.0 1.9E-61 6.6E-66 551.4 40.6 368 23-615 33-418 (539)
5 2z2z_A TK-subtilisin precursor 100.0 2.3E-59 7.9E-64 517.8 22.1 344 25-615 2-392 (395)
6 3t41_A Epidermin leader peptid 100.0 4.4E-57 1.5E-61 512.4 26.6 357 25-615 44-465 (471)
7 2p4e_P Proprotein convertase s 100.0 2.8E-59 9.5E-64 535.4 6.9 339 26-581 76-422 (692)
8 1y9z_A Alkaline serine proteas 100.0 1.2E-55 3.9E-60 495.2 27.7 387 110-636 5-437 (441)
9 1r6v_A Subtilisin-like serine 100.0 3.1E-55 1.1E-59 505.6 24.0 376 22-626 28-450 (671)
10 1dbi_A AK.1 serine protease; h 100.0 6E-52 2E-56 436.9 24.4 267 110-614 12-279 (280)
11 1gci_A Subtilisin; hydrolase, 100.0 4E-52 1.4E-56 435.3 21.8 264 110-614 5-269 (269)
12 1r0r_E Subtilisin carlsberg; h 100.0 3.5E-52 1.2E-56 437.5 20.4 265 110-614 5-274 (274)
13 1to2_E Subtilisin BPN'; serine 100.0 8.5E-52 2.9E-56 435.9 21.3 267 110-615 5-276 (281)
14 1thm_A Thermitase; hydrolase(s 100.0 3.3E-51 1.1E-55 431.2 23.2 266 110-614 12-278 (279)
15 2x8j_A Intracellular subtilisi 100.0 1.7E-51 5.8E-56 442.8 18.8 273 109-614 21-310 (327)
16 4h6x_A Thiazoline oxidase/subt 100.0 4.5E-53 1.6E-57 460.9 6.1 301 123-614 21-337 (357)
17 2ixt_A 36KDA protease; serine 100.0 3.5E-50 1.2E-54 430.8 25.8 290 109-609 6-309 (310)
18 3zxy_A Subtilisin-like protein 100.0 3.7E-51 1.3E-55 432.4 16.7 264 129-614 3-274 (282)
19 2z30_A TK-subtilisin; thermoco 100.0 1.2E-50 4.2E-55 435.6 18.4 273 109-614 8-316 (320)
20 2iy9_A SUBA; toxin, shiga, pla 100.0 2.4E-50 8.3E-55 438.8 17.3 280 109-615 23-329 (347)
21 4h6w_A N-terminal cyanobactin 100.0 2.5E-50 8.4E-55 431.5 14.9 270 123-614 11-287 (306)
22 1sh7_A Extracellular subtilisi 100.0 2.2E-48 7.5E-53 410.0 24.5 250 108-582 3-257 (284)
23 3lpc_A APRB2; protease, subtil 100.0 4.9E-49 1.7E-53 427.7 19.4 305 110-615 10-337 (340)
24 1wmd_A Protease; alpha-beta hy 100.0 7.3E-49 2.5E-53 439.7 21.0 294 120-616 8-319 (434)
25 3lxu_X Tripeptidyl-peptidase 2 100.0 3.1E-48 1E-52 464.6 24.9 359 210-761 267-653 (1354)
26 2b6n_A Proteinase K; S binding 100.0 5.3E-48 1.8E-52 406.6 21.6 251 108-581 5-260 (278)
27 4dzt_A Aqualysin-1, aqualysin- 100.0 7.2E-48 2.4E-52 405.7 21.9 252 106-582 3-259 (276)
28 2pwa_A Proteinase K; structure 100.0 7.7E-48 2.6E-52 404.8 19.7 259 107-611 4-273 (279)
29 2oxa_A Extracellular serine pr 100.0 8.5E-47 2.9E-51 438.9 21.6 299 119-617 56-427 (600)
30 1p8j_A Furin precursor; prohor 100.0 1.1E-46 3.6E-51 425.7 20.6 304 109-616 13-331 (471)
31 2qtw_B Proprotein convertase s 100.0 1.8E-46 6.3E-51 418.9 21.3 293 110-614 3-313 (546)
32 2id4_A Kexin; KEX2, kexin, fur 100.0 2.2E-46 7.6E-51 425.8 18.2 296 109-616 27-343 (503)
33 3f7m_A Alkaline serine proteas 100.0 6.8E-46 2.3E-50 391.2 18.2 243 110-582 8-261 (279)
34 3hjr_A Extracellular serine pr 100.0 3.8E-43 1.3E-47 409.8 25.5 319 119-615 56-425 (600)
35 1t1e_A Kumamolisin; proenzyme, 99.9 1.6E-25 5.4E-30 254.9 7.4 96 241-340 274-383 (552)
36 1ga6_A Serine-carboxyl protein 99.9 2.6E-22 8.9E-27 217.8 12.5 99 242-340 90-206 (372)
37 2w2n_P Proprotein convertase s 99.1 9.3E-11 3.2E-15 104.7 6.4 80 22-102 34-113 (114)
38 3edy_A Tripeptidyl-peptidase 1 99.1 3E-10 1E-14 128.3 10.2 97 243-340 263-374 (544)
39 3cnq_P Subtilisin BPN'; unclea 99.0 1.3E-09 4.3E-14 91.1 8.2 75 22-106 5-79 (80)
40 2qtw_A Proprotein convertase s 98.8 2.8E-09 9.4E-14 96.2 6.2 79 23-102 45-123 (124)
41 1v5i_B POIA1, IA-1=serine prot 98.7 2.9E-08 9.8E-13 81.7 7.3 70 26-102 3-75 (76)
42 3icu_A E3 ubiquitin-protein li 98.7 1.3E-07 4.3E-12 91.6 11.7 94 385-478 82-187 (194)
43 2z30_B TK-subtilisin; thermoco 97.8 4.2E-05 1.4E-09 60.5 6.1 63 26-102 2-64 (65)
44 2ek8_A Aminopeptidase; metallo 96.5 0.017 5.7E-07 63.5 12.9 70 396-465 110-182 (421)
45 3iib_A Peptidase M28; YP_92679 95.6 0.044 1.5E-06 60.5 10.7 104 367-478 103-227 (444)
46 3kas_A Transferrin receptor pr 95.4 0.027 9.2E-07 64.8 8.2 69 397-465 128-230 (640)
47 2ys4_A Hydrocephalus-inducing 95.4 0.077 2.6E-06 47.3 9.6 74 673-756 40-114 (122)
48 3fed_A Glutamate carboxypeptid 94.7 0.029 1E-06 65.2 6.0 71 396-466 150-268 (707)
49 3qbt_B Inositol polyphosphate 91.8 1.6 5.4E-05 39.6 11.6 87 674-761 43-138 (140)
50 3lxu_X Tripeptidyl-peptidase 2 88.3 0.35 1.2E-05 59.4 5.0 25 128-152 31-55 (1354)
51 2e6j_A Hydin protein; PAPD, st 86.5 0.75 2.6E-05 39.8 5.0 67 674-746 26-93 (112)
52 2r39_A FIXG-related protein; s 85.0 3.3 0.00011 36.2 8.4 56 674-731 31-86 (118)
53 1y9z_A Alkaline serine proteas 84.2 0.64 2.2E-05 51.1 4.1 30 486-523 183-212 (441)
54 3qis_A Inositol polyphosphate 80.9 14 0.00047 39.2 12.8 87 674-761 46-141 (366)
55 2qsv_A Uncharacterized protein 78.0 6.6 0.00023 38.4 8.6 80 674-759 19-104 (220)
56 3idu_A Uncharacterized protein 66.7 19 0.00064 31.9 7.9 51 673-727 32-83 (127)
57 1wic_A Hypothetical protein ri 58.0 29 0.001 31.6 7.8 53 674-729 35-87 (152)
58 1m1s_A WR4; structural genomic 56.4 40 0.0014 29.2 7.9 50 677-729 26-75 (116)
59 1z9l_A Vesicle-associated memb 56.1 34 0.0012 30.1 7.7 53 674-729 27-79 (128)
60 1row_A SSP-19, MSP-domain prot 55.6 46 0.0016 28.4 8.2 49 677-728 18-66 (109)
61 1w8o_A Bacterial sialidase; 3D 55.5 56 0.0019 36.7 11.5 65 662-731 363-428 (601)
62 2kq1_A BH0266 protein; solutio 55.1 4.1 0.00014 35.7 1.4 55 677-731 56-112 (119)
63 2cri_A Vesicle-associated memb 48.8 48 0.0016 29.9 7.7 53 674-729 31-83 (147)
64 1msp_A MSP, major sperm protei 47.8 58 0.002 28.5 7.8 51 675-728 26-76 (126)
65 3abz_A Beta-glucosidase I; gly 45.4 2.1E+02 0.0072 33.7 14.3 161 537-727 618-795 (845)
66 2qsv_A Uncharacterized protein 43.6 56 0.0019 31.6 7.8 54 674-730 134-187 (220)
67 1wgl_A TOLL-interacting protei 38.3 22 0.00075 26.8 2.9 36 545-580 3-38 (59)
68 3q48_A Chaperone CUPB2; IG fol 34.9 3.4E+02 0.012 26.7 12.3 53 674-729 42-104 (257)
69 2x41_A Beta-glucosidase; hydro 34.0 36 0.0012 39.5 5.3 68 660-729 597-677 (721)
70 3lyw_A YBBR family protein; st 33.6 33 0.0011 28.2 3.5 38 676-713 43-81 (90)
71 3zyz_A Beta-D-glucoside glucoh 32.1 92 0.0032 36.0 8.3 53 674-729 613-674 (713)
72 2l0d_A Cell surface protein; s 30.0 1.5E+02 0.0052 25.4 7.3 25 673-697 18-43 (114)
73 3sd2_A Putative member of DUF3 28.4 2.1E+02 0.0072 23.9 7.5 66 665-745 35-100 (101)
74 4ep8_B Urease subunit beta; al 24.0 73 0.0025 26.5 3.9 17 674-690 18-34 (101)
75 3isy_A Bsupi, intracellular pr 24.0 2.9E+02 0.0098 23.9 8.0 54 673-727 17-87 (120)
76 1ni7_A ER75, hypothetical prot 23.9 50 0.0017 30.2 3.3 29 543-572 81-109 (155)
77 1yew_A Particulate methane mon 22.3 87 0.003 32.5 4.9 54 673-728 263-336 (382)
78 3hrz_B Cobra venom factor; ser 20.9 2.1E+02 0.0071 28.2 7.5 65 660-728 85-154 (252)
79 2hr0_B Complement C3 alpha' ch 20.4 1.4E+02 0.0048 35.6 7.2 66 659-728 83-154 (915)
80 3g0m_A Cysteine desulfuration 20.3 48 0.0016 29.8 2.3 33 539-572 70-102 (141)
81 2l04_A Major tail protein V; b 20.2 74 0.0025 26.2 3.3 27 703-730 8-34 (91)
No 1
>3i6s_A Subtilisin-like protease; PA-domain, FN3-domain, hydrolase; HET: NAG FUC; 2.50A {Solanum lycopersicum} PDB: 3i74_A*
Probab=100.00 E-value=6.1e-127 Score=1108.39 Aligned_cols=633 Identities=40% Similarity=0.702 Sum_probs=574.6
Q ss_pred cCCCCcccccccCCCCCCCccccccCCCCCCcEEEEeccCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCceeE
Q 004261 104 TTRSPQFLGISSDFGLSAGYSKLDFDKASLDVIIGVLDTGVWPESKSFDDSAMPEVPTKWRGQCESGPDFSPKLCNKKLI 183 (765)
Q Consensus 104 ~~~s~~~~g~~~~~~~~~~~~~~~~~~~G~gV~VaVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~~~~~~~n~kii 183 (765)
++++|+|+|+....+ +|..+.+|+||+|||||||||++||+|.+.+++|+|.+|+|.|+.|.+|+...||+|++
T Consensus 1 Tt~s~~flgl~~~~~------~w~~~~~G~gViVaViDTGId~~Hp~f~d~g~~p~p~~wkg~c~~g~~f~~~~cN~kii 74 (649)
T 3i6s_A 1 TTHTSDFLKLNPSSG------LWPASGLGQDVIVAVLDSGIWPESASFQDDGMPEIPKRWKGICKPGTQFNASMCNRKLI 74 (649)
T ss_dssp CCSHHHHTTCCSSSS------HHHHHGGGTTCEEEEEESCBCTTSGGGCCTTCCCCCTTCCCCBCCBTTBCTTSCCSSEE
T ss_pred CCCChHHcCCCCchh------hHhccCCCCCCEEEEEccCCCCCChhhccCCCCCCccccccccccCcccccccccccee
Confidence 578999999986544 99999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeccccccccCCCCCCCCCCCCCCCCCCCCchhhHHhhccCCCCccCcccccCcceeeecCCCeEEEEEeeccCCCCh
Q 004261 184 GARFFSKGYHMAGGSFSKKPNEPESPRDYDGHGTHTASTAAGVPVANASLLGYASGVARGMATHARVATYKVCWKTGCFG 263 (765)
Q Consensus 184 g~~~~~~g~~~~~~~~~~~~~~~~~~~d~~gHGThVAgi~Ag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g~~~ 263 (765)
++++|.+++..... + ...+..+++|.+||||||||||||+.+++.+.+|++.|+++||||+|+|++||+|+..|+..
T Consensus 75 g~~~f~~~~~~~~~--~-~~~~~~~~~D~~GHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g~~~ 151 (649)
T 3i6s_A 75 GANYFNKGILANDP--T-VNITMNSARDTDGHGTHCASITAGNFAKGVSHFGYAPGTARGVAPRARLAVYKFSFNEGTFT 151 (649)
T ss_dssp EEEECCHHHHHHCT--T-CCCTTCSSBCSSSHHHHHHHHHHCCCEEEEEETTEEEEEECCSSTTCEEEEEECEETTEECH
T ss_pred eeEeccCccccccc--c-cccCCCCCCCCCCcHHHHHHHHhCCCCcCccccccccCceeEECCCCEEEEEeccCCCCCCH
Confidence 99999987654321 1 12345678999999999999999999999999999999999999999999999999888999
Q ss_pred HHHHHHHHHHHhCCCcEEEeccCCCCCCCcccHHHHHHHHHHhCCcEEEEecCCCCCCCCCcccCCCceEEEccCCCCCc
Q 004261 264 SDILAGIDRAIQDGVDVLSMSLGGGSAPYYRDTIAVGAFAAMEKGIVVSCSAGNSGPTKASLANVAPWILTVGAGTLDRD 343 (765)
Q Consensus 264 ~~i~~ai~~a~~~g~dVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~ap~vitVgAst~d~~ 343 (765)
+++++||+||+++|+||||||||+...++..+++.+++++|.++||+||+||||+|+...++++.+||+|+|||++.||.
T Consensus 152 ~~i~~Ai~~A~~~gvdVIn~SlG~~~~~~~~~~i~~a~~~A~~~Gi~vV~AAGN~G~~~~t~~~~ap~vitVgAst~dr~ 231 (649)
T 3i6s_A 152 SDLIAAMDQAVADGVDMISISYGYRFIPLYEDAISIASFGAMMKGVLVSASAGNRGPGIGSLNNGSPWILCVASGHTDRT 231 (649)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCCCCSCCGGGCHHHHHHHHHHHTTCEEEEECCSCTTSTTCCSCCCTTSEEEEEEECSCE
T ss_pred HHHHHHHHHHHHcCCCEEEeCCccCCcccchhHHHHHHHHHHhCCcEEEEeCCCCCCCCCccCCCCCceEEEeeeecccc
Confidence 99999999999999999999999987777889999999999999999999999999999999999999999999999999
Q ss_pred eeEEEEeCCceeEEeEeeccCCCCCCeeEEEEEecCCCCCCCCCCCCCCCCCCCcc--cCeEEEEeCCCcchhhhhHHHh
Q 004261 344 FPAYVFLGNKKKATGVSLYSGNGMGNKPVSLVYNKGSNGSSSSNLCLPGSLQPELV--RGKVVICDRGINARVEKGAVVR 421 (765)
Q Consensus 344 ~~~~~~~~~g~~~~~~s~~~~~~~~~~~~~~v~~~~~~~~~~~~~c~~~~~~~~~~--~gkivl~~~g~~~~~~~~~~~~ 421 (765)
|+..+.+++++++.|.++++.... ...+|++|.. ....|....+++..+ +||||+|++|.|.+.+|..+++
T Consensus 232 f~~~~~lgng~~~~g~sl~~~~~~-~~~~plv~~~------~~~~C~~~~l~~~~vdl~GkIvlc~~g~~~~~~k~~~~~ 304 (649)
T 3i6s_A 232 FAGTLTLGNGLKIRGWSLFPARAF-VRDSPVIYNK------TLSDCSSEELLSQVENPENTIVICDDNGDFSDQMRIITR 304 (649)
T ss_dssp EEEEEEETTSCEEEEECCCSSCBC-EEEEEEECCT------TTTTCCCHHHHTTSSSGGGCEEEECCCSCHHHHHHHHHH
T ss_pred eeeEEEeCCCcEEeeeecccCccc-CcceeeEecc------cccccccccccccccccCCcEEEEeCCCccHHHHHHHHH
Confidence 999999999999999999887644 6789999965 456899888887777 9999999999999999999999
Q ss_pred hcCccEEEEeecCCCCccccccCccccEEEEchhhHHHHHHHHhcCCCceEEEEecceEecccCCCeeeeccCCCCCCCC
Q 004261 422 DAGGVGMILANTAASGEELVADSHLLPAVAIGRKMGDIVREYAKTVPNPTALLTFGGTVLNVRPSPVVAAFSSRGPNMVT 501 (765)
Q Consensus 422 ~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~v~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~ 501 (765)
++|+.|+|++|+. .......+.+|+++|+..+++.|++|++++.+++++|.+..+..+..+++.++.||||||+.+.
T Consensus 305 ~~Ga~g~i~~n~~---~~~~~~~~~~P~~~v~~~~g~~i~~yi~s~~~~~a~i~~~~t~~~~~~~~~va~FSSrGP~~~~ 381 (649)
T 3i6s_A 305 ARLKAAIFISEDP---GVFRSATFPNPGVVVNKKEGKQVINYVKNSVTPTATITFQETYLDTKPAPVVAASSARGPSRSY 381 (649)
T ss_dssp HTCSEEEEECCCG---GGGGCCCCCSCEEEECHHHHHHHHHHHHTCSSCEEEEEEEEEECCCSSCCEECTTSCCSSCTTC
T ss_pred hcCceEEEEecCc---cccccccCcCCEEEEcHHHHHHHHHHHhcCCCceEEEeecceeeccCCCCcccccCCCCCCCCC
Confidence 9999999999987 4556777899999999999999999999999999999999999988899999999999999998
Q ss_pred CCCcCCceeecCCcEEeeecCCCCCCCcccCc-cceeeEEeccccchhhhhhhHHHHHHhhCCCCCHHHHHHHHHhccee
Q 004261 502 PQILKPDVIGPGVNILAAWTEASGPTELEKDT-RRTKFNIMSGTSMSCPHLSGVAALLKAAHPDWSPSAIKSALMTTAYV 580 (765)
Q Consensus 502 ~~~lKPDi~APG~~I~sa~~~~~~~~~~~~~~-~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~sp~~ik~~L~~TA~~ 580 (765)
+++|||||+|||++|+++|+....+.....+. +...|..+||||||||||||+||||||+||+|+|++||++||+||++
T Consensus 382 ~~ilKPDI~APG~~Ilsa~~~~~~~~~~~~d~~~~~~y~~~SGTSMAaPhVAGvaALlks~~P~~Spa~IksaLmtTA~~ 461 (649)
T 3i6s_A 382 LGISKPDILAPGVLILAAYPPNVFATSIGTNILLSTDYILESGTSMAAPHAAGIAAMLKAAHPEWSPSAIRSAMMTTADP 461 (649)
T ss_dssp TTSCSCCEEEECSSEEEECCTTSCCEEETTTEEECCSEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTCBC
T ss_pred CCccCCeEEeCCCCeEeecCCCCCccccccccccccceecccccccccHHHHHHHHHHHHhCCCCCHHHHHHHHhccccc
Confidence 99999999999999999999865544443333 34589999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCCCCCCCCCCCcCCCcccCccccCCCCccccCChhhHHHhhhccCCChheeeeeccCCccc--ccCCCCCC
Q 004261 581 VDNTKSPLHDAADGRLSTPWAHGSGHVNPQKAISPGLVYDASTEDYVAFLCSLGYTIEHVQAIVKRPNIT--CTRKFNTP 658 (765)
Q Consensus 581 ~~~~~~~~~~~~~~~~~~~~~~G~G~vd~~~Al~~glv~~~~~~d~~~~l~~~~~~~~~~~~~~~~~~~~--c~~~~~~~ 658 (765)
+++.+.++.++..+.++++++||+|+||+.+|++||||||++.+||+.|||++||+.++|+.|++. +++ |+. .+
T Consensus 462 ~~~~g~~i~~~~~~~~a~~~~~GaG~vn~~~A~~pGLvyd~~~~dy~~flc~~~y~~~~i~~~~~~-~~~~~C~~---~~ 537 (649)
T 3i6s_A 462 LDNTRKPIKDSDNNKAATPLDMGAGHVDPNRALDPGLVYDATPQDYVNLLCSLNFTEEQFKTIARS-SASHNCSN---PS 537 (649)
T ss_dssp BCTTSSBCEETTTSSBCCHHHHTTCBCCHHHHTCCSEECCCCHHHHHHHHHTTCCCHHHHHHHHTT-TSCC-CCC---CC
T ss_pred ccCCCCcccccccCCcCCcCCCCeeeeCHHHhcCccccccCCchhHHHhhhcCCCCcccceeeecC-CCcCCCCC---ch
Confidence 999999998876778899999999999999999999999999999999999999999999999987 566 975 56
Q ss_pred CCCCCCceeeeccCcce-----EEEEEEEEecCCCceeEEEEEeCCCCceEEEEcCeEEEeecCeeEEEEEEEEEecCCC
Q 004261 659 GELNYPSFSVLFGDQRV-----VRYTRELTNVGPARSLYNVTADGPSTVGISVRPKRLLFRTVGEKKRYTVTFVAKNGDQ 733 (765)
Q Consensus 659 ~~ln~ps~~~~~~~~~~-----~~~~rtvtn~g~~~~ty~~~~~~~~g~~v~v~p~~l~~~~~~~~~~~~vt~~~~~~~~ 733 (765)
.+||||||++.+..... ++|+|||||||+..++|+++++.|+|++|+|+|++|+|++.+|+++|+|||+......
T Consensus 538 ~~lNyPs~~~~~~~~~~~~~~~~~~~Rtvtnvg~~~~~y~~~v~~p~g~~v~v~P~~l~f~~~~~~~~f~v~~~~~~~~~ 617 (649)
T 3i6s_A 538 ADLNYPSFIALYSIEGNFTLLEQKFKRTVTNVGKGAATYKAKLKAPKNSTISVSPQILVFKNKNEKQSYTLTIRYIGDEG 617 (649)
T ss_dssp CCCCCSSEEEEECCSSCCCCEEEEEEEEEEECC--CEEEEEEEECCTTEEEEEESSEEEECC-CCEEEEEEEEEECCC--
T ss_pred hhcCCCcEEeecccCCCCccceEEEEEEEEEeCCCCcEEEEEEecCCCCEEEEECCEEEEecCCCEEEEEEEEEecccCC
Confidence 79999999998622234 8999999999999999999999999999999999999988999999999999865433
Q ss_pred CCCCcEEEEEEEEC--CccEEEEEEEEEec
Q 004261 734 KMGGAAFGSIVWGN--AQHQVRSPVAFSWT 761 (765)
Q Consensus 734 ~~~~~~~G~~~~~~--~~~~v~~P~~~~~~ 761 (765)
+.|.||+|+|++ +.|.||+||+|++.
T Consensus 618 --~~~~fg~l~w~~~~~~h~vrsPi~v~~~ 645 (649)
T 3i6s_A 618 --QSRNVGSITWVEQNGNHSVRSPIVTSPI 645 (649)
T ss_dssp ---CCCEEEEEEEETTSCCEEEEEEEEEEC
T ss_pred --CceEEEEEEEEcCCCCeEEEEeEEEEEc
Confidence 568999999999 99999999999976
No 2
>3vta_A Cucumisin; subtilisin-like fold, serine protease, hydrolase; HET: DFP NAG FUC BMA MAN; 2.75A {Cucumis melo}
Probab=100.00 E-value=1.2e-113 Score=1000.79 Aligned_cols=611 Identities=42% Similarity=0.714 Sum_probs=512.5
Q ss_pred cCCCCcccccccCCCCCCCccccccCCCCCCcEEEEeccCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCceeE
Q 004261 104 TTRSPQFLGISSDFGLSAGYSKLDFDKASLDVIIGVLDTGVWPESKSFDDSAMPEVPTKWRGQCESGPDFSPKLCNKKLI 183 (765)
Q Consensus 104 ~~~s~~~~g~~~~~~~~~~~~~~~~~~~G~gV~VaVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~~~~~~~n~kii 183 (765)
++++|+|+|++. . +|....+|+||+|||||||||++||+|+|+++++++.+|+|.|+.+.+| .||+|++
T Consensus 1 tt~s~~flGl~~--~------~~~~~~~G~gViVgViDTGId~~Hp~f~d~g~~~~~~~w~g~~~~~~~~---~~n~k~i 69 (621)
T 3vta_A 1 TTRSWDFLGFPL--T------VPRRSQVESNIVVGVLDTGIWPESPSFDDEGFSPPPPKWKGTCETSNNF---RCNRKII 69 (621)
T ss_dssp CCSHHHHTTCCT--T------CCCCHHHHTTCEEEEEESCBCTTSGGGCCTTCCCCCTTCCCCBCCSSSC---CCCSSEE
T ss_pred CCCChhHcCCCc--c------ccccCCCCCCCEEEEEecCCCCCChhhcCCCCCCcccccccccccCCCc---ccCccee
Confidence 578999999974 2 7888889999999999999999999999999999999999999999887 4999999
Q ss_pred eeeeccccccccCCCCCCCCCCCCCCCCCCCCchhhHHhhccCCCCccCcccccCcceeeecCCCeEEEEEeeccCCCCh
Q 004261 184 GARFFSKGYHMAGGSFSKKPNEPESPRDYDGHGTHTASTAAGVPVANASLLGYASGVARGMATHARVATYKVCWKTGCFG 263 (765)
Q Consensus 184 g~~~~~~g~~~~~~~~~~~~~~~~~~~d~~gHGThVAgi~Ag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g~~~ 263 (765)
++++|..++.... .+..+++|++||||||||||||+.+.+.+.+|++.|.++||||+|+|++||+|++.||..
T Consensus 70 g~~~~~~~~~~~~-------~~~~~p~D~~GHGTHvAgi~AG~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~g~~~ 142 (621)
T 3vta_A 70 GARSYHIGRPISP-------GDVNGPRDTNGHGTHTASTAAGGLVSQANLYGLGLGTARGGVPLARIAAYKVCWNDGCSD 142 (621)
T ss_dssp EEEECCCSSSCCT-------TCCSSSBCSSSHHHHHHHHHHCCCEEEEEETTEEEEEECCSCTTSEEEEEECEETTEECH
T ss_pred eeeecccCCccCC-------CCCCCCCCCCcCHHHHHHHHhCcCCCCccccccccccEEEECCCCEEEEEEeecCCCCCH
Confidence 9999988654432 344678999999999999999999988888899899999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCcEEEeccCCCC-CCCcccHHHHHHHHHHhCCcEEEEecCCCCCCCCCcccCCCceEEEccCCCCC
Q 004261 264 SDILAGIDRAIQDGVDVLSMSLGGGS-APYYRDTIAVGAFAAMEKGIVVSCSAGNSGPTKASLANVAPWILTVGAGTLDR 342 (765)
Q Consensus 264 ~~i~~ai~~a~~~g~dVIn~SlG~~~-~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~ap~vitVgAst~d~ 342 (765)
+++++||++|+++|+||||||||+.. ..+..+++++++++|.++||+||+||||+|+...++++.+||+++|++++.+|
T Consensus 143 ~di~~a~~~a~~~g~dVin~SlG~~~~~~~~~~~~~~~~~~a~~~Gi~vv~aAGN~g~~~~t~~~~a~~~~~v~ast~d~ 222 (621)
T 3vta_A 143 TDILAAYDDAIADGVDIISLSVGGANPRHYFVDAIAIGSFHAVERGILTSNSAGNGGPNFFTTASLSPWLLSVAASTMDR 222 (621)
T ss_dssp HHHHHHHHHHHHHTCSEEEECCCCCCGGGGGGCTHHHHHHHHHTTTCEEEEECCSCCSSTTCCCCCCTTSEEEEEECCSE
T ss_pred HHHHHHHHHHHHhCCCEEEecCCCCCCCCcCCcHHHHHHHHHHHCCCEEEEeCCCCCCCCcccCCCCCCceeEEEeeccc
Confidence 99999999999999999999999864 34567889999999999999999999999999999999999999999999999
Q ss_pred ceeEEEEeCCceeEEeEeeccCCCCCCeeEEEEEecCCC----CCCCCCCCCCCCCCCCcccCeEEEEeCCCcchhhhhH
Q 004261 343 DFPAYVFLGNKKKATGVSLYSGNGMGNKPVSLVYNKGSN----GSSSSNLCLPGSLQPELVRGKVVICDRGINARVEKGA 418 (765)
Q Consensus 343 ~~~~~~~~~~g~~~~~~s~~~~~~~~~~~~~~v~~~~~~----~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~ 418 (765)
.|...+.++++..+.+.+++... ...+++++..... .......|....+++.+++|||++|.++ +..+..
T Consensus 223 ~~~~~~~~~~~~~~~~~s~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~gkivl~~~~---~~~~~~ 296 (621)
T 3vta_A 223 KFVTQVQIGNGQSFQGVSINTFD---NQYYPLVSGRDIPNTGFDKSTSRFCTDKSVNPNLLKGKIVVCEAS---FGPHEF 296 (621)
T ss_dssp EEEEEEEETTSCEEEEBCCCCSC---CEEECEEETTTSCCTTCCHHHHTTTCTTCSCGGGTTTSEEECSSC---CCHHHH
T ss_pred cceeeEEeccCceeeeeecccCC---CcccccccccccccccccccccccccccccccccccceEEEEecC---CChhHH
Confidence 99999999999999888876533 4567777665543 1123567888999999999999999865 345667
Q ss_pred HHhhcCccEEEEeecCCCCccccccCccccEEEEchhhHHHHHHHHhcCCCceEEEEecceEecccCCCeeeeccCCCCC
Q 004261 419 VVRDAGGVGMILANTAASGEELVADSHLLPAVAIGRKMGDIVREYAKTVPNPTALLTFGGTVLNVRPSPVVAAFSSRGPN 498 (765)
Q Consensus 419 ~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~v~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~ 498 (765)
.....|+.+++++++... ..+.+.+|...++..++..++.|+.....+.+.+....+. ....++.++.||||||+
T Consensus 297 ~~~~~Ga~gvi~~~~~~~----~~~~~~lP~~~v~~~~g~~i~~~~~~~~~~~a~~~~~~~~-~~~~~~~va~FSSrGP~ 371 (621)
T 3vta_A 297 FKSLDGAAGVLMTSNTRD----YADSYPLPSSVLDPNDLLATLRYIYSIRSPGATIFKSTTI-LNASAPVVVSFSSRGPN 371 (621)
T ss_dssp HHHHTTCSEEEEECSCCS----SCCCCSSSEEEECHHHHHHHHHHHHHHSSCCEEECCCEEE-ECTTCCCBCTTSCCCSC
T ss_pred hhhhcceeEEEEEecCCC----cccccccceEEECHHHHHHHHHHHhccCCcceEEecceEe-ccCCCCceeeecCCCCC
Confidence 778899999999987654 2456789999999999999999999999888887555444 34568899999999999
Q ss_pred CCCCCCcCCceeecCCcEEeeecCCCCCCCcccCccceeeEEeccccchhhhhhhHHHHHHhhCCCCCHHHHHHHHHhcc
Q 004261 499 MVTPQILKPDVIGPGVNILAAWTEASGPTELEKDTRRTKFNIMSGTSMSCPHLSGVAALLKAAHPDWSPSAIKSALMTTA 578 (765)
Q Consensus 499 ~~~~~~lKPDi~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~sp~~ik~~L~~TA 578 (765)
...++++||||+|||++|+|+|+....... +.+...|..+||||||||||||+||||||+||+|+|++||++||+||
T Consensus 372 ~~~~~ilKPDI~APG~~Ilsa~~~~~~~~~---~~~~~~y~~~SGTSMAaPhVAGvaALl~q~~P~~spa~IksaLmtTA 448 (621)
T 3vta_A 372 RATKDVIKPDISGPGVEILAAWPSVAPVGG---IRRNTLFNIISGTSMSCPHITGIATYVKTYNPTWSPAAIKSALMTTA 448 (621)
T ss_dssp TTCTTSCSCCEEEECSSEEEECCSSSCBTT---BCCCCSEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHTC
T ss_pred CCCCCeeccccccCCcceEeecCccccccC---cCCCCcceEecCccccchhhhhHHHHHHHHCCCCCHHHHHHHHHhcC
Confidence 887899999999999999999986543222 22345799999999999999999999999999999999999999999
Q ss_pred eeccCCCCCCCCCCCCCCCCCCcCCCcccCccccCCCCccccCChhhHHHhhhccCCChheeeeeccCCcccccC-CCCC
Q 004261 579 YVVDNTKSPLHDAADGRLSTPWAHGSGHVNPQKAISPGLVYDASTEDYVAFLCSLGYTIEHVQAIVKRPNITCTR-KFNT 657 (765)
Q Consensus 579 ~~~~~~~~~~~~~~~~~~~~~~~~G~G~vd~~~Al~~glv~~~~~~d~~~~l~~~~~~~~~~~~~~~~~~~~c~~-~~~~ 657 (765)
++++.. ..++.+|+||+|+|||.+|++||||||++.+||+.|||++||+.++++.+++. ...|.. ....
T Consensus 449 ~~~~~~---------~~~~~~~~~GaG~v~~~~A~~pGLvyd~~~~dy~~~lc~~~~~~~~~~~~~~~-~~~~~~~~~~~ 518 (621)
T 3vta_A 449 SPMNAR---------FNPQAEFAYGSGHVNPLKAVRPGLVYDANESDYVKFLCGQGYNTQAVRRITGD-YSACTSGNTGR 518 (621)
T ss_dssp BCCCTT---------TCTTTHHHHTTCBCCHHHHSCCSEECCCCGGGCC------------------------------C
T ss_pred Cccccc---------CCCCCchhcCCCccCHHHhcCCCeEeecccchhhhhhcccCCCchhheeeecc-ccccCCCCcCc
Confidence 987653 34567799999999999999999999999999999999999999999999987 566764 3345
Q ss_pred CCCCCCCceeeeccC--cceEEEEEEEEecCCCceeEEEEEeCCCCceEEEEcCeEEEeecCeeEEEEEEEEEecCCCCC
Q 004261 658 PGELNYPSFSVLFGD--QRVVRYTRELTNVGPARSLYNVTADGPSTVGISVRPKRLLFRTVGEKKRYTVTFVAKNGDQKM 735 (765)
Q Consensus 658 ~~~ln~ps~~~~~~~--~~~~~~~rtvtn~g~~~~ty~~~~~~~~g~~v~v~p~~l~~~~~~~~~~~~vt~~~~~~~~~~ 735 (765)
..+||||||++.+.. ..+++|+|||||||....+|+++++.|+|++|+|+|++|+|++.+|+++|+|||+... .
T Consensus 519 ~~~lN~pS~~v~~~~~~~~~~t~~rtvtnvg~~~~ty~~~v~~p~gv~v~V~P~~l~f~~~~~~~~~~vt~~~~~--~-- 594 (621)
T 3vta_A 519 VWDLNYPSFGLSVSPSQTFNQYFNRTLTSVAPQASTYRAMISAPQGLTISVNPNVLSFNGLGDRKSFTLTVRGSI--K-- 594 (621)
T ss_dssp GGGSCCSSEEEECCSSCCEEEEEEEEEEECSSSCEEEEEEEECCSSEEEEEESSEEEECSTTCEEEEEEEEEECC--C--
T ss_pred ccccccccEEEEccCCCceEEEEEEEEEccCCCCeEEEEEEECCCCcEEEEecCEEEEcCCCcEEEEEEEEEecC--C--
Confidence 789999999987543 4789999999999999999999999999999999999999998999999999998642 3
Q ss_pred CCcEEEEEEEECCccEEEEEEEEEe
Q 004261 736 GGAAFGSIVWGNAQHQVRSPVAFSW 760 (765)
Q Consensus 736 ~~~~~G~~~~~~~~~~v~~P~~~~~ 760 (765)
+.|.||+|+|+|+.|.||+||+|+.
T Consensus 595 ~~~~~g~l~w~d~~h~Vr~Pi~v~~ 619 (621)
T 3vta_A 595 GFVVSASLVWSDGVHYVRSPITITS 619 (621)
T ss_dssp SSEEEEEEEEECSSCCCEEEEEEEC
T ss_pred CceEEEEEEEEcCCEEEEeCEEEEE
Confidence 6799999999999999999999985
No 3
>1xf1_A C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {Streptococcus pyogenes} PDB: 3eif_A*
Probab=100.00 E-value=4.1e-83 Score=773.26 Aligned_cols=539 Identities=23% Similarity=0.288 Sum_probs=427.2
Q ss_pred CCCccccccCCCCCCcEEEEeccCCCCCCCCCCCCCCCCCCcccccccccCCCC----------CCCCCCceeEeeeecc
Q 004261 120 SAGYSKLDFDKASLDVIIGVLDTGVWPESKSFDDSAMPEVPTKWRGQCESGPDF----------SPKLCNKKLIGARFFS 189 (765)
Q Consensus 120 ~~~~~~~~~~~~G~gV~VaVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~~----------~~~~~n~kiig~~~~~ 189 (765)
++...+|..+.+|+||+|||||||||++||+|.+ +..|++.|..+..| ...+||+|++++++|.
T Consensus 4 i~~~~~w~~~~~G~GV~VaVIDTGId~~Hp~f~~------~~~~~~~~~~~~~~~~~~~~~g~~~g~~~n~Kii~~~~~~ 77 (926)
T 1xf1_A 4 SQVKTLQEKAGKGAGTVVAVIDAGFDKNHEAWRL------TDKTKARYQSKEDLEKAKKEHGITYGEWVNDKVAYYHDYS 77 (926)
T ss_dssp TCCHHHHHHHCSCTTCEEEEEESCCTTCCCCCSC------CSCCCSSCCHHHHHHHHHHTTTCCCCBCCSSSCCEEEESC
T ss_pred cccHHHHhccCCCCCcEEEEEecCCCCCCHhHcC------CCCCcccccchhhhcccccccCcccccccCcccceeeccc
Confidence 3456699999999999999999999999999984 34677776543221 2347999999999987
Q ss_pred ccccccCCCCCCCCCCCCCCCCCCCCchhhHHhhccCCCCccCcccccCcceeeecCCCeEEEEEeeccCC--CChHHHH
Q 004261 190 KGYHMAGGSFSKKPNEPESPRDYDGHGTHTASTAAGVPVANASLLGYASGVARGMATHARVATYKVCWKTG--CFGSDIL 267 (765)
Q Consensus 190 ~g~~~~~~~~~~~~~~~~~~~d~~gHGThVAgi~Ag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g--~~~~~i~ 267 (765)
++. . ..|..||||||||||||+...+.+. .+.+.||||+|+|++||+|++.+ +..++++
T Consensus 78 ~~~--------------~-~~D~~gHGThVAgiiAg~~~~~~~~----~~~~~GvAP~A~l~~~kv~~~~g~~~~~~~i~ 138 (926)
T 1xf1_A 78 KDG--------------K-TAVDQEHGTHVSGILSGNAPSETKE----PYRLEGAMPEAQLLLMRVEIVNGLADYARNYA 138 (926)
T ss_dssp CCS--------------C-CCCSSTTTTHHHHSSCCCCCCCCSC----SCCTTTTCTTSEEEEEECCCCSCHHHHHHHHH
T ss_pred cCC--------------C-CCCCCCcHHHHHHHHhCCCccCccc----CCceEEECCCCEEEEEEeecCCCCCCcHHHHH
Confidence 621 1 2288999999999999987654332 23468999999999999998876 5667899
Q ss_pred HHHHHHHhCCCcEEEeccCCCC--CCCcccHHHHHHHHHHhCCcEEEEecCCCCCCC-------------C--CcccCCC
Q 004261 268 AGIDRAIQDGVDVLSMSLGGGS--APYYRDTIAVGAFAAMEKGIVVSCSAGNSGPTK-------------A--SLANVAP 330 (765)
Q Consensus 268 ~ai~~a~~~g~dVIn~SlG~~~--~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~-------------~--~~~~~ap 330 (765)
+||+||+++|+||||||||+.. .....+.+..++++|.++||+||+||||+|+.. . ..++.+|
T Consensus 139 ~Ai~~Ai~~gvdVIn~SlG~~~~~~~~~~~~~~~ai~~A~~~GilvV~AAGN~G~~g~~~~~~~~~~p~~~tv~~PA~~~ 218 (926)
T 1xf1_A 139 QAIRDAINLGAKVINMSFGNAALAYANLPDETKKAFDYAKSKGVSIVTSAGNDSSFGGKTRLPLADHPDYGVVGTPAAAD 218 (926)
T ss_dssp HHHHHHHHTTCEEEEECCSSCCCTTCCCCHHHHHHHHHHHHTTCEEEEECCSCCBTTCTTSCCBTTCCCCBCCCSCTTTC
T ss_pred HHHHHHHHhCCcEEEECCCCCCCCccccccHHHHHHHHHHhCCcEEEEeCCCCCCcCCccccccccCCCcceecCcccCC
Confidence 9999999999999999999863 234567788889999999999999999999632 1 2334589
Q ss_pred ceEEEccCCCCCceeEEEEe-CCceeEEeEeeccCCCC-CCeeEEEEEecCCCCCCCCCCCCCCCCCCCcccCeEEEEeC
Q 004261 331 WILTVGAGTLDRDFPAYVFL-GNKKKATGVSLYSGNGM-GNKPVSLVYNKGSNGSSSSNLCLPGSLQPELVRGKVVICDR 408 (765)
Q Consensus 331 ~vitVgAst~d~~~~~~~~~-~~g~~~~~~s~~~~~~~-~~~~~~~v~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~ 408 (765)
|+|+|||++.++.+...+.+ +++....+.+++....+ ....+++++... .|....+ .+++|||++|+|
T Consensus 219 ~vitVgA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~--------g~~~~~~--~~v~Gkivl~~r 288 (926)
T 1xf1_A 219 STLTVASYSPDKQLTETVRVKTADQQDKEMPVLSTNRFEPNKAYDYAYANR--------GTKEDDF--KDVKGKIALIER 288 (926)
T ss_dssp CSEEEEEEBCSEEEEEEEEEECTTSCEEEEEEEEESCCCTTCCEEEEECTT--------SCSTTTT--TTCTTSEEEEEC
T ss_pred ceEEEeccccccccccceEEEcCCCcceeeEEEecCCCCCCceEEEEECCC--------CCCccch--hhcCCeEEEEEC
Confidence 99999999999999988887 66655555555443333 357899999754 3776655 689999999999
Q ss_pred CCcchhhhhHHHhhcCccEEEEeecCCCCcc-ccccCccccEEEEchhhHHHHHHHHhcCCCceEEEEecceE--ecccC
Q 004261 409 GINARVEKGAVVRDAGGVGMILANTAASGEE-LVADSHLLPAVAIGRKMGDIVREYAKTVPNPTALLTFGGTV--LNVRP 485 (765)
Q Consensus 409 g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~-~~~~~~~~p~~~v~~~~~~~l~~~~~~~~~~~~~i~~~~~~--~~~~~ 485 (765)
|.|.+.+|..+++++|+.|+|++|+...... .......+|+.+|+..++..|+. ++..+|.+..+. .....
T Consensus 289 g~~~~~~k~~~~~~~Ga~gvi~~n~~~~~~~~~~~~~~~iP~~~i~~~~g~~l~~------~~~~ti~~~~~~~~~~~~~ 362 (926)
T 1xf1_A 289 GDIDFKDKIAKAKKAGAVGVLIYDNQDKGFPIELPNVDQMPAAFISRKDGLLLKD------NPQKTITFNATPKVLPTAS 362 (926)
T ss_dssp CSSCHHHHHHHHHHTTCSEEEEECSSTTCCCEECCCSTTCCEEEECHHHHHHHHH------CSSCEEEECSSCEEEECSS
T ss_pred CCCCHHHHHHHHHhCCCcEEEEEecCCCCcccccCccccccEEEEeHHHHHHHHh------CCceEEEecccceecccCC
Confidence 9999999999999999999999998754332 23456789999999999988763 345566665543 45566
Q ss_pred CCeeeeccCCCCCCCCCCCcCCceeecCCcEEeeecCCCCCCCcccCccceeeEEeccccchhhhhhhHHHHHH----hh
Q 004261 486 SPVVAAFSSRGPNMVTPQILKPDVIGPGVNILAAWTEASGPTELEKDTRRTKFNIMSGTSMSCPHLSGVAALLK----AA 561 (765)
Q Consensus 486 ~~~~a~fSS~Gp~~~~~~~lKPDi~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~----~~ 561 (765)
.+.++.||||||+.+ +++||||+|||++|+++++.+ .|..+||||||||||||+||||+ +.
T Consensus 363 ~~~~a~FSSrGp~~~--~~lKPDI~APG~~I~sa~~~~-------------~y~~~SGTSMAaPhVAG~aALl~q~~k~~ 427 (926)
T 1xf1_A 363 GTKLSRFSSWGLTAD--GNIKPDIAAPGQDILSSVANN-------------KYAKLSGTSMSAPLVAGIMGLLQKQYETQ 427 (926)
T ss_dssp CSBCCTTSCCCBCTT--SCBSCCEEEECCCEEESSSCS-------------SSCEEESCTTHHHHHHHHHHHHHHHHHHS
T ss_pred cceeccccCCCCCCC--CccCceEECCCCCEEeeccCC-------------cceecCccchhHHHHHHHHHHHHHHHhcc
Confidence 789999999999965 899999999999999999864 79999999999999999999996 45
Q ss_pred CCCCCHHH----HHHHHHhcceeccCCCCCCCCCCCCCCCCCCcCCCcccCccccCCCCccccCChhhHHHhhhccCCCh
Q 004261 562 HPDWSPSA----IKSALMTTAYVVDNTKSPLHDAADGRLSTPWAHGSGHVNPQKAISPGLVYDASTEDYVAFLCSLGYTI 637 (765)
Q Consensus 562 ~P~~sp~~----ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~G~G~vd~~~Al~~glv~~~~~~d~~~~l~~~~~~~ 637 (765)
||+|+|+| ||++||+||+++...+ ...++++++||+|+||+.+|++|.+ |||..++..
T Consensus 428 ~P~~sp~~~~~~Iks~L~~TA~~~~~~~-------~~~~~~~~~~G~G~vn~~~A~~~~~-----------~l~~~~~~~ 489 (926)
T 1xf1_A 428 YPDMTPSERLDLAKKVLMSSATALYDED-------EKAYFSPRQQGAGAVDAKKASAATM-----------YVTDKDNTS 489 (926)
T ss_dssp SSSSHHHHHHHHHHHHHHHHSBCCEEGG-------GTEECCHHHHTTCBCCHHHHHHCSE-----------EEEESSSSC
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCcccCC-------CCccCChhccCCCccCHHHhcCCCe-----------EEEcCCCCc
Confidence 99999997 9999999999875421 1234678899999999999999865 678766543
Q ss_pred heeeeeccCCcccccCCCCCCCCCCCCceeeeccCcceEEEEEEEEecCCC--ceeEEEEEeC--CCCceEEEEcCeEEE
Q 004261 638 EHVQAIVKRPNITCTRKFNTPGELNYPSFSVLFGDQRVVRYTRELTNVGPA--RSLYNVTADG--PSTVGISVRPKRLLF 713 (765)
Q Consensus 638 ~~~~~~~~~~~~~c~~~~~~~~~ln~ps~~~~~~~~~~~~~~rtvtn~g~~--~~ty~~~~~~--~~g~~v~v~p~~l~~ 713 (765)
.+ |.+... ....+++|||||+|+. ..+|++.+.. |.+..++|+|..|.|
T Consensus 490 ~~--------------------------i~l~~~-~~~~~~~~tv~N~g~~~~~~~y~~~v~~~~~~~~~~~v~p~~l~~ 542 (926)
T 1xf1_A 490 SK--------------------------VHLNNV-SDKFEVTVNVHNKSDKPQELYYQATVQTDKVDGKHFALAPKVLYE 542 (926)
T ss_dssp SC--------------------------EEEEEE-CSEEEEEEEEEECSSSCEEEEEEEEEEEEEEETTEEEEEEEEEEE
T ss_pred ce--------------------------eecccc-CccEEEEEEEEEeCCCceeEEEEEEEEeccCCCceEEeccceeEe
Confidence 22 222211 2577899999999985 4678887765 778899998887766
Q ss_pred ee-------cCeeEEEEEEEEEec--------CCCCCCCcEEEEEEEE--CCcc-EEEEEEEEEec
Q 004261 714 RT-------VGEKKRYTVTFVAKN--------GDQKMGGAAFGSIVWG--NAQH-QVRSPVAFSWT 761 (765)
Q Consensus 714 ~~-------~~~~~~~~vt~~~~~--------~~~~~~~~~~G~~~~~--~~~~-~v~~P~~~~~~ 761 (765)
.. +||+++|+|||++.. .+. +.++||+|+|+ ++.| .||+||+++..
T Consensus 543 ~~~~~vtv~ag~~~~~~vt~~~~~~~~~~~~~~~~--~~~~~G~i~~~~~~~~~~~v~~P~~~~~g 606 (926)
T 1xf1_A 543 TSWQKITIPANSSKQVTVPIDASRFSKDLLAQMKN--GYFLEGFVRFKQDPTKEELMSIPYIGFRG 606 (926)
T ss_dssp CCCEEEEECTTEEEEEEEEEECHHHHHHHHHHSTT--CEEEEEEEEEESSTTSCCCEEEEEEEEES
T ss_pred ccCCeEEECCCCEEEEEEEEEcCccchhhcccccC--CcEEEEEEEEEeCCCCCCEEEeeeEEEec
Confidence 44 599999999999751 122 56899999999 4555 49999999865
No 4
>3afg_A Subtilisin-like serine protease; propeptide, thermococcus kodakaraensis, hydrolas protease; 2.00A {Thermococcus kodakarensis}
Probab=100.00 E-value=1.9e-61 Score=551.44 Aligned_cols=368 Identities=32% Similarity=0.462 Sum_probs=290.8
Q ss_pred CCCceEEEEecCCCCCCcccchhHHHHHhhccccCCCCceEEEEcceeeEEEEEcCHHHHHHH-----------HcCCCe
Q 004261 23 AAKQTYIVHMKHQAKPSTFSTHNDWYASSVQSLSSSTDSLLYTYNTAYNGFAASLDPDQAQAL-----------RQSDAV 91 (765)
Q Consensus 23 ~~~~~yIV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~l~~~~~~~L-----------~~~p~V 91 (765)
....+|||+|++..... ...+.+++. +.+++++|+ .|+||+++++++++++| +++|+|
T Consensus 33 ~~~~~~iV~~~~~~~~~-------~~~~~~~~~---g~~v~~~~~-~~~g~~~~l~~~~~~~l~~~~~~~~~~~~~~~~V 101 (539)
T 3afg_A 33 DQEVSTIIMFDNQADKE-------KAVEILDFL---GAKIKYNYH-IIPALAVKIKVKDLLIIAGLMDTGYFGNAQLSGV 101 (539)
T ss_dssp TCEEEEEEEESSHHHHH-------HHHHHHHHH---TCEEEEECS-SSSEEEEEEEHHHHHHHTTCSCCC---CCCCTTE
T ss_pred cCceEEEEEECCCCCHH-------HHHHHHHhc---CCeEEEEee-eeeEEEEEeCHHHHHHHHhhccccccccccCCCe
Confidence 34557999999764321 122233333 268899997 69999999999999999 889999
Q ss_pred EEEEEcceeccccCCCCcccccccCCCCCCCccccccCCCCCCcEEEEeccCCCCCCCCCCCCCCCCCCcccccccccCC
Q 004261 92 LGVYEDTLYTLHTTRSPQFLGISSDFGLSAGYSKLDFDKASLDVIIGVLDTGVWPESKSFDDSAMPEVPTKWRGQCESGP 171 (765)
Q Consensus 92 ~~v~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~G~gV~VaVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~ 171 (765)
++|++++.+++... .+++......++...+|..+.+|+||+|||||||||++||+|.+
T Consensus 102 ~~v~~d~~~~~~~~----~~~~~~~~~~~~~~~~~~~g~~G~gv~VaViDtGid~~Hpdl~~------------------ 159 (539)
T 3afg_A 102 QFIQEDYVVKVAVE----TEGLDESAAQVMATNMWNLGYDGSGITIGIIDTGIDASHPDLQG------------------ 159 (539)
T ss_dssp EEEEECCEEECC---------------CCBCSCCBCCSCCCTTCEEEEEESBCCTTSGGGTT------------------
T ss_pred eEEEecccccccCc----cccCCccccccCcHhHHhcCCCCCCcEEEEEecCCCCCChHHhC------------------
Confidence 99999999887532 22333222334456799999999999999999999999999963
Q ss_pred CCCCCCCCceeEeeeeccccccccCCCCCCCCCCCCCCCCCCCCchhhHHhhccCCCCccCcccccCcceeeecCCCeEE
Q 004261 172 DFSPKLCNKKLIGARFFSKGYHMAGGSFSKKPNEPESPRDYDGHGTHTASTAAGVPVANASLLGYASGVARGMATHARVA 251 (765)
Q Consensus 172 ~~~~~~~n~kiig~~~~~~g~~~~~~~~~~~~~~~~~~~d~~gHGThVAgi~Ag~~~~~~~~~G~~~g~~~GvAP~A~l~ 251 (765)
++++.++|.++ ...+.|++||||||||||||+..+. .|.+.||||+|+|+
T Consensus 160 ---------~i~~~~d~~~~--------------~~~~~D~~gHGThVAgiiag~~~~~-------~g~~~GvAp~A~l~ 209 (539)
T 3afg_A 160 ---------KVIGWVDFVNG--------------KTTPYDDNGHGTHVASIAAGTGAAS-------NGKYKGMAPGAKLV 209 (539)
T ss_dssp ---------TEEEEEETTTC--------------CSSCCBSSSHHHHHHHHHHCCCGGG-------TTTTCCSCTTCEEE
T ss_pred ---------CEeeeEECCCC--------------CCCCCCCCCCHHHHHHHHhCcCccC-------CCCEEEECCCCEEE
Confidence 46667777652 1346788999999999999985432 23358999999999
Q ss_pred EEEeeccCC-CChHHHHHHHHHHHhC----CCcEEEeccCCCCCCCcccHHHHHHHHHHhCCcEEEEecCCCCCCCC--C
Q 004261 252 TYKVCWKTG-CFGSDILAGIDRAIQD----GVDVLSMSLGGGSAPYYRDTIAVGAFAAMEKGIVVSCSAGNSGPTKA--S 324 (765)
Q Consensus 252 ~~kv~~~~g-~~~~~i~~ai~~a~~~----g~dVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~--~ 324 (765)
.+|++++.| +..+++++||+||+++ |++|||||||........+.+..++.+|.++|++||+||||+|+... .
T Consensus 210 ~~kv~~~~g~~~~~~i~~ai~~a~~~~~~~g~~Vin~SlG~~~~~~~~~~l~~ai~~a~~~GvlvV~AAGN~g~~~~~~~ 289 (539)
T 3afg_A 210 GIKVLNGQGSGSISDIINGVDWAVQNKDKYGIKVINLSLGSSQSSDGTDSLSQAVNNAWDAGLVVVVAAGNSGPNKYTVG 289 (539)
T ss_dssp EEECSCTTSEEEHHHHHHHHHHHHHTHHHHTEEEEEECCCCCSCCCSCSHHHHHHHHHHHTTCEEEEECCSCCSSSSCCC
T ss_pred EEEeecCCCCcCHHHHHHHHHHHHhhhhhcCCcEEEeCCCCCCCCccchHHHHHHHHHHhcCCEEEEECCCCCCCCCccc
Confidence 999999877 7889999999999986 99999999998755445678888999999999999999999998644 4
Q ss_pred cccCCCceEEEccCCCCCceeEEEEeCCceeEEeEeeccCCCCCCeeEEEEEecCCCCCCCCCCCCCCCCCCCcccCeEE
Q 004261 325 LANVAPWILTVGAGTLDRDFPAYVFLGNKKKATGVSLYSGNGMGNKPVSLVYNKGSNGSSSSNLCLPGSLQPELVRGKVV 404 (765)
Q Consensus 325 ~~~~ap~vitVgAst~d~~~~~~~~~~~g~~~~~~s~~~~~~~~~~~~~~v~~~~~~~~~~~~~c~~~~~~~~~~~gkiv 404 (765)
.++.++++|+|||++.
T Consensus 290 ~Pa~~~~vitVgA~~~---------------------------------------------------------------- 305 (539)
T 3afg_A 290 SPAAASKVITVGAVDK---------------------------------------------------------------- 305 (539)
T ss_dssp TTTTCSSSEEEEEECT----------------------------------------------------------------
T ss_pred CCccCCceEEEeeecC----------------------------------------------------------------
Confidence 5678899999998321
Q ss_pred EEeCCCcchhhhhHHHhhcCccEEEEeecCCCCccccccCccccEEEEchhhHHHHHHHHhcCCCceEEEEecceEeccc
Q 004261 405 ICDRGINARVEKGAVVRDAGGVGMILANTAASGEELVADSHLLPAVAIGRKMGDIVREYAKTVPNPTALLTFGGTVLNVR 484 (765)
Q Consensus 405 l~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~v~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~ 484 (765)
T Consensus 306 -------------------------------------------------------------------------------- 305 (539)
T 3afg_A 306 -------------------------------------------------------------------------------- 305 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCeeeeccCCCCCCCCCCCcCCceeecCCcEEeeecCCCCCCCcccCccceeeEEeccccchhhhhhhHHHHHHhhCCC
Q 004261 485 PSPVVAAFSSRGPNMVTPQILKPDVIGPGVNILAAWTEASGPTELEKDTRRTKFNIMSGTSMSCPHLSGVAALLKAAHPD 564 (765)
Q Consensus 485 ~~~~~a~fSS~Gp~~~~~~~lKPDi~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~ 564 (765)
.+.++.||||||+.+ +++||||+|||++|+++++...... +.....|..++|||||||||||++|||+|+||+
T Consensus 306 -~~~~a~fSs~Gp~~~--~~~kpdi~APG~~I~s~~~~~~~~~----~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~p~ 378 (539)
T 3afg_A 306 -YDVITDFSSRGPTAD--NRLKPEVVAPGNWIIAARASGTSMG----QPINDYYTAAPGTAMATPHVAGIAALLLQAHPS 378 (539)
T ss_dssp -TSCBCSSSCCCCCTT--CBCCCSEEEECSSEEEECCTTCCCS----EECSSSEEEECSHHHHHHHHHHHHHHHHHHCTT
T ss_pred -CcccccccCCCCCCC--CCCcccEecCcCCEEeeccCCCCCC----CCCcccccccCchHHHHHHHHHHHHHHHHHCCC
Confidence 125789999999986 8999999999999999987542110 111125999999999999999999999999999
Q ss_pred CCHHHHHHHHHhcceeccCCCCCCCCCCCCCCCCCCcCCCcccCccccCCC
Q 004261 565 WSPSAIKSALMTTAYVVDNTKSPLHDAADGRLSTPWAHGSGHVNPQKAISP 615 (765)
Q Consensus 565 ~sp~~ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~G~G~vd~~~Al~~ 615 (765)
|+|++||++|++||+++...+ .+++.||+|+||+.+|++.
T Consensus 379 ~s~~~vk~~L~~tA~~~~~~~-----------~~~~~~G~G~vn~~~Al~~ 418 (539)
T 3afg_A 379 WTPDKVKTALIETADIVKPDE-----------IADIAYGAGRVNAYKAAYY 418 (539)
T ss_dssp CCHHHHHHHHHHHSBCSSGGG-----------CSBTTTBTCBCCHHHHHTG
T ss_pred CCHHHHHHHHHhhCccCCCCC-----------CCccCccCCccCHHHHhhh
Confidence 999999999999999764211 2456899999999999984
No 5
>2z2z_A TK-subtilisin precursor; thermococcus kodakaraensis, hydrolase; 1.87A {Thermococcus kodakarensis} PDB: 2e1p_A 2zwp_A 2zwo_A
Probab=100.00 E-value=2.3e-59 Score=517.80 Aligned_cols=344 Identities=26% Similarity=0.345 Sum_probs=278.8
Q ss_pred CceEEEEecCCCCCCcccchhHHHHHhhccccCCCCceEEEEcceeeEEEEEcCHHHHHHHHcCCCeEEEEEcceecccc
Q 004261 25 KQTYIVHMKHQAKPSTFSTHNDWYASSVQSLSSSTDSLLYTYNTAYNGFAASLDPDQAQALRQSDAVLGVYEDTLYTLHT 104 (765)
Q Consensus 25 ~~~yIV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~l~~~~~~~L~~~p~V~~v~~~~~~~~~~ 104 (765)
+.+|||+||++... ++++++. +.+++++|. .+++|+++++++++++|+++|+|++|++++.++++.
T Consensus 2 ~~~~iV~~~~~~~~----------~~~~~~~---g~~v~~~~~-~~~~~~~~~~~~~~~~L~~~p~V~~v~~~~~~~~~~ 67 (395)
T 2z2z_A 2 TIRVIVSVDKAKFN----------PHEVLGI---GGHIVYQFK-LIPAVVVDVPANAVGKLKKMPGVEKVEFDHQAVLLG 67 (395)
T ss_dssp EEEEEEEECTTTCC----------HHHHHHT---TCEEEEECS-SSSEEEEEEEGGGHHHHHTSTTEEEEEECCEEEECC
T ss_pred cEEEEEEECCCccH----------HHHHHHc---CCEEEEEec-cCCEEEEEECHHHHHHHHcCCCceEEEEeeeecccC
Confidence 46899999987431 1233332 378999998 499999999999999999999999999999998754
Q ss_pred CCC-----------CcccccccCCCCCCCccccccCCCCCC--cEEEEeccCCCCCCCCCCCCCCCCCCcccccccccCC
Q 004261 105 TRS-----------PQFLGISSDFGLSAGYSKLDFDKASLD--VIIGVLDTGVWPESKSFDDSAMPEVPTKWRGQCESGP 171 (765)
Q Consensus 105 ~~s-----------~~~~g~~~~~~~~~~~~~~~~~~~G~g--V~VaVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~ 171 (765)
... ...|++..+ +.+.+|..+ +|+| |+|||||||||++||+|.+
T Consensus 68 ~~~~~~~~~~~~~~~~~w~~~~i----~~~~~w~~~-~G~g~~v~VaViDtGid~~Hp~l~~------------------ 124 (395)
T 2z2z_A 68 KPSWLGGGSTQPAQTIPWGIERV----KAPSVWSIT-DGSVSVIQVAVLDTGVDYDHPDLAA------------------ 124 (395)
T ss_dssp EECC------CCSCCCCHHHHHT----TCGGGGGTC-SSCCTTCEEEEEESCBCTTCTTTGG------------------
T ss_pred CCCcccccccCccccCCcchhhc----CHHHHHhhc-CCCCCcEEEEEEcCCCCCCChhHhh------------------
Confidence 322 123555443 346789988 9999 9999999999999999964
Q ss_pred CCCCCCCCceeEeeeeccccccccCCCCCCCCCCCCCCCCCCCCchhhHHhhccCCCCccCcccccCcceeeecCCCeEE
Q 004261 172 DFSPKLCNKKLIGARFFSKGYHMAGGSFSKKPNEPESPRDYDGHGTHTASTAAGVPVANASLLGYASGVARGMATHARVA 251 (765)
Q Consensus 172 ~~~~~~~n~kiig~~~~~~g~~~~~~~~~~~~~~~~~~~d~~gHGThVAgi~Ag~~~~~~~~~G~~~g~~~GvAP~A~l~ 251 (765)
++...++|..+... .+..++.|.+||||||||||||.. ++ .| +.||||+|+|+
T Consensus 125 ---------~~~~~~~~~~~~~~---------~~~~~~~d~~gHGT~vAgiia~~~-n~---~g-----~~GvAp~a~l~ 177 (395)
T 2z2z_A 125 ---------NIAWCVSTLRGKVS---------TKLRDCADQNGHGTHVIGTIAALN-ND---IG-----VVGVAPGVQIY 177 (395)
T ss_dssp ---------GEEEEEECGGGCCB---------CCHHHHBCSSSHHHHHHHHHHCCC-SS---SS-----CCCSSTTCEEE
T ss_pred ---------ccccCccccCCccc---------CCCCCCCCCCCCHHHHHHHHHeec-CC---Cc-----eEEECCCCEEE
Confidence 34555555542110 001124678999999999999973 22 12 37999999999
Q ss_pred EEEeeccCC-CChHHHHHHHHHHHhC--------------------CCcEEEeccCCCCCCCcccHHHHHHHHHHhCCcE
Q 004261 252 TYKVCWKTG-CFGSDILAGIDRAIQD--------------------GVDVLSMSLGGGSAPYYRDTIAVGAFAAMEKGIV 310 (765)
Q Consensus 252 ~~kv~~~~g-~~~~~i~~ai~~a~~~--------------------g~dVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~ 310 (765)
.+|++++.| +..+++++||+||+++ +++|||||||.... ...+..++.++.++|++
T Consensus 178 ~~kv~~~~g~~~~~~i~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~Vin~S~G~~~~---~~~~~~ai~~a~~~gv~ 254 (395)
T 2z2z_A 178 SVRVLDARGSGSYSDIAIGIEQAILGPDGVADKDGDGIIAGDPDDDAAEVISMSLGGPAD---DSYLYDMIIQAYNAGIV 254 (395)
T ss_dssp EEECSCTTSEEEHHHHHHHHHHHHHTTTTCSSTTCSSCCTTCTTSCCCSEEEECEEBSCC---CHHHHHHHHHHHHTTCE
T ss_pred EEEEecCCCCccHHHHHHHHHHHHhCccccccccccccccccccCCCCeEEEecCCCCCC---CHHHHHHHHHHHHCCCE
Confidence 999998877 7888999999999988 99999999998532 34667777788999999
Q ss_pred EEEecCCCCCCCCCcccCCCceEEEccCCCCCceeEEEEeCCceeEEeEeeccCCCCCCeeEEEEEecCCCCCCCCCCCC
Q 004261 311 VSCSAGNSGPTKASLANVAPWILTVGAGTLDRDFPAYVFLGNKKKATGVSLYSGNGMGNKPVSLVYNKGSNGSSSSNLCL 390 (765)
Q Consensus 311 vV~AAGN~G~~~~~~~~~ap~vitVgAst~d~~~~~~~~~~~g~~~~~~s~~~~~~~~~~~~~~v~~~~~~~~~~~~~c~ 390 (765)
||+||||+|.....+++..|++|+|||++.
T Consensus 255 vV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~-------------------------------------------------- 284 (395)
T 2z2z_A 255 IVAASGNEGAPSPSYPAAYPEVIAVGAIDS-------------------------------------------------- 284 (395)
T ss_dssp EEEECCSSCCSSCCBTTTSTTEEEEEEECT--------------------------------------------------
T ss_pred EEEECCCCCCCCCCCccCCCCEEEEEEecC--------------------------------------------------
Confidence 999999999887888999999999998321
Q ss_pred CCCCCCCcccCeEEEEeCCCcchhhhhHHHhhcCccEEEEeecCCCCccccccCccccEEEEchhhHHHHHHHHhcCCCc
Q 004261 391 PGSLQPELVRGKVVICDRGINARVEKGAVVRDAGGVGMILANTAASGEELVADSHLLPAVAIGRKMGDIVREYAKTVPNP 470 (765)
Q Consensus 391 ~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~v~~~~~~~l~~~~~~~~~~ 470 (765)
T Consensus 285 -------------------------------------------------------------------------------- 284 (395)
T 2z2z_A 285 -------------------------------------------------------------------------------- 284 (395)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eEEEEecceEecccCCCeeeeccCCCCCCCCCCCcCCceeecCCcEEeeecCCCCCCCcccCccceeeEEeccccchhhh
Q 004261 471 TALLTFGGTVLNVRPSPVVAAFSSRGPNMVTPQILKPDVIGPGVNILAAWTEASGPTELEKDTRRTKFNIMSGTSMSCPH 550 (765)
Q Consensus 471 ~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~lKPDi~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~ 550 (765)
.+.++.||++|| +|+|||++|+++++.+ .|..++||||||||
T Consensus 285 ---------------~~~~a~fS~~G~----------~v~APG~~i~s~~~~~-------------~y~~~sGTS~AaP~ 326 (395)
T 2z2z_A 285 ---------------NDNIASFSNRQP----------EVSAPGVDILSTYPDD-------------SYETLMGTAMATPH 326 (395)
T ss_dssp ---------------TSCBCTTSCSSC----------SEEEECSSEEEEETTT-------------EEEEEESHHHHHHH
T ss_pred ---------------CCCCCcccCCCC----------CEEeCCCCeeeecCCC-------------ceEecCCHHHHHHH
Confidence 125789999997 6799999999999875 89999999999999
Q ss_pred hhhHHHHHHhhCC-------------CCCHHHHHHHHHhcceeccCCCCCCCCCCCCCCCCCCcCCCcccCccccCCC
Q 004261 551 LSGVAALLKAAHP-------------DWSPSAIKSALMTTAYVVDNTKSPLHDAADGRLSTPWAHGSGHVNPQKAISP 615 (765)
Q Consensus 551 VAG~aALl~~~~P-------------~~sp~~ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~G~G~vd~~~Al~~ 615 (765)
|||++|||+|++| .|++.+||++|++||+++.. +..+..||||+||+.+|++.
T Consensus 327 VaG~aAll~~~~p~~~~~~~~~~~~~~ls~~~v~~~L~~tA~~~~~------------~g~~~~~G~G~vd~~~A~~~ 392 (395)
T 2z2z_A 327 VSGVVALIQAAYYQKYGKILPVGTFDDISKNTVRGILHITADDLGP------------TGWDADYGYGVVRAALAVQA 392 (395)
T ss_dssp HHHHHHHHHHHHHHHHSSCCCCCCTTCCSSSSHHHHHHHHSBCCSS------------SSSBTTTBTCBCCHHHHHHH
T ss_pred HHHHHHHHHHhCccccccccccccccCCCHHHHHHHHHhhccccCC------------CCCCCCccCceeCHHHHHHH
Confidence 9999999999999 99999999999999998742 22346899999999999873
No 6
>3t41_A Epidermin leader peptide processing serine protea; structural genomics, center for structural genomics of infec diseases, csgid; 1.95A {Staphylococcus aureus} PDB: 3qfh_A
Probab=100.00 E-value=4.4e-57 Score=512.35 Aligned_cols=357 Identities=18% Similarity=0.219 Sum_probs=276.4
Q ss_pred CceEEEEecCCCCCCcccchhHHHHHhhccccCCCCceEEEEcceeeEEEEEcCHHHHHHHHc-CCCeEEEEEcceeccc
Q 004261 25 KQTYIVHMKHQAKPSTFSTHNDWYASSVQSLSSSTDSLLYTYNTAYNGFAASLDPDQAQALRQ-SDAVLGVYEDTLYTLH 103 (765)
Q Consensus 25 ~~~yIV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~l~~~~~~~L~~-~p~V~~v~~~~~~~~~ 103 (765)
.+.|||++++.. .+.+++++. +.++++.|. .+++|+++++++++++|++ +|+|++|++++.++++
T Consensus 44 ~~~yiv~~~~~~----------~~~~~~~~~---g~~v~~~~~-~~~~~~~~~~~~~~~~L~~~~p~V~~v~~~~~~~~~ 109 (471)
T 3t41_A 44 ELYYSVEYKNTA----------TFNKLVKKK---SLNVVYNIP-ELHVAQIKMTKMHANALANYKNDIKYINATCSTCIT 109 (471)
T ss_dssp CEEEEEEESCHH----------HHHHHHHHH---TCEEEEEEG-GGTEEEEEECHHHHHHHHTCTTTEEEEEECCSSCBC
T ss_pred ceEEEEEcCCHH----------HHHHHHHhC---CCEEEEecC-CccEEEEEeCHHHHHHHHhcCCCCcEEEecceeccc
Confidence 457888776533 123334433 367888886 5999999999999999999 9999999999988876
Q ss_pred cCCCC----------cccccccCCCCCCCccccccCCCCCCcEEEEeccCCCCCCCCCCCCCCCCCCcccccccccCCCC
Q 004261 104 TTRSP----------QFLGISSDFGLSAGYSKLDFDKASLDVIIGVLDTGVWPESKSFDDSAMPEVPTKWRGQCESGPDF 173 (765)
Q Consensus 104 ~~~s~----------~~~g~~~~~~~~~~~~~~~~~~~G~gV~VaVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~~ 173 (765)
..... ..|++..+.. ...+|..+.+|+||+|||||||||++||+|.+.- |.+
T Consensus 110 ~~~~~~~~~~~~~~~~~w~l~~i~~---~~~~~~~~~~G~gv~VaViDtGid~~Hp~~~~~~-------~~~-------- 171 (471)
T 3t41_A 110 SEKTIDRTSNESLFSRQWDMNKITN---NGASYDDLPKHANTKIAIIDTGVMKNHDDLKNNF-------STD-------- 171 (471)
T ss_dssp CCCCCCC---CCSCCCCHHHHTTTT---TTGGGGGCCSSCCCCEEEEESCCCTTCTTTTTTB-------CTT--------
T ss_pred cccccccCCCCccccccccHhhccC---cHHHHhccCCCCCcEEEEEeCCCCCCChhHhcCc-------ccC--------
Confidence 54321 2355554433 1258999999999999999999999999998541 111
Q ss_pred CCCCCCceeEeeeeccccccccCCCCCCCCCCCCCCCCCCCCchhhHHhhccCCCCccCcccccCcceeeecCCCeEEEE
Q 004261 174 SPKLCNKKLIGARFFSKGYHMAGGSFSKKPNEPESPRDYDGHGTHTASTAAGVPVANASLLGYASGVARGMATHARVATY 253 (765)
Q Consensus 174 ~~~~~n~kiig~~~~~~g~~~~~~~~~~~~~~~~~~~d~~gHGThVAgi~Ag~~~~~~~~~G~~~g~~~GvAP~A~l~~~ 253 (765)
.+.|..+........+ ...+...+.|.+||||||||||||++. +.||||+|+|+.+
T Consensus 172 -----------~~~~~~~~~~~~~~~~-~~~~~~~~~d~~gHGT~vAgiiaa~g~------------~~GvAp~a~l~~~ 227 (471)
T 3t41_A 172 -----------SKNLVPLNGFRGTEPE-ETGDVHDVNDRKGHGTMVSGQTSANGK------------LIGVAPNNKFTMY 227 (471)
T ss_dssp -----------CEECCCTTCGGGCCTT-CCCCTTCCCCSSSHHHHHHHHHHCBSS------------SBCSSTTSCEEEE
T ss_pred -----------CcccccCCCccCCCcc-cCCCCCCCcCCCCccchhhheeecCCc------------eeEECCCCeEEEE
Confidence 1112111100000000 112234678899999999999998632 3799999999999
Q ss_pred EeeccCCCChHHHHHHHHHHHhCCCcEEEeccCCCCC-------------CCcccHHHHHHHHHHhCCcEEEEecCCCCC
Q 004261 254 KVCWKTGCFGSDILAGIDRAIQDGVDVLSMSLGGGSA-------------PYYRDTIAVGAFAAMEKGIVVSCSAGNSGP 320 (765)
Q Consensus 254 kv~~~~g~~~~~i~~ai~~a~~~g~dVIn~SlG~~~~-------------~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~ 320 (765)
|++++.++..+++++||+||++++++|||||||.... ....+.+..++..+.++|++||+||||+|.
T Consensus 228 kv~~~~~~~~~~i~~ai~~a~~~g~~Vin~S~G~~~~~~~~~~~~~~~~~~~~~~~~~~ai~~a~~~Gi~vV~AAGN~g~ 307 (471)
T 3t41_A 228 RVFGSKKTELLWVSKAIVQAANDGNQVINISVGSYIILDKNDHQTFRKDEKVEYDALQKAINYAKKKKSIVVAAAGNDGI 307 (471)
T ss_dssp ECCSSSCCCHHHHHHHHHHHHHTTCSEEEECCCEEEEECTTCCCSEESSCHHHHHHHHHHHHHHHHTTCEEEEECCSSCC
T ss_pred EeccCCCCcHHHHHHHHHHHHhCCCCEEEeCCCCCCCCccccccccccccchhHHHHHHHHHHHHhCCCEEEEEcCCCCc
Confidence 9998866899999999999999999999999997310 022356778888899999999999999997
Q ss_pred CCC------------------CcccCCCceEEEccCCCCCceeEEEEeCCceeEEeEeeccCCCCCCeeEEEEEecCCCC
Q 004261 321 TKA------------------SLANVAPWILTVGAGTLDRDFPAYVFLGNKKKATGVSLYSGNGMGNKPVSLVYNKGSNG 382 (765)
Q Consensus 321 ~~~------------------~~~~~ap~vitVgAst~d~~~~~~~~~~~g~~~~~~s~~~~~~~~~~~~~~v~~~~~~~ 382 (765)
... ..++.+|++|+|||++.
T Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~Pa~~~~vitVgA~~~------------------------------------------ 345 (471)
T 3t41_A 308 DVNDKQKLKLQREYQGNGEVKDVPASMDNVVTVGSTDQ------------------------------------------ 345 (471)
T ss_dssp BTTCHHHHHHTTTCCSSSEEEEETTTSTTEEEEEEECT------------------------------------------
T ss_pred CCCcccccccccccccCCceeeccccCCCeEEEEeeCC------------------------------------------
Confidence 654 26678899999998431
Q ss_pred CCCCCCCCCCCCCCCcccCeEEEEeCCCcchhhhhHHHhhcCccEEEEeecCCCCccccccCccccEEEEchhhHHHHHH
Q 004261 383 SSSSNLCLPGSLQPELVRGKVVICDRGINARVEKGAVVRDAGGVGMILANTAASGEELVADSHLLPAVAIGRKMGDIVRE 462 (765)
Q Consensus 383 ~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~v~~~~~~~l~~ 462 (765)
T Consensus 346 -------------------------------------------------------------------------------- 345 (471)
T 3t41_A 346 -------------------------------------------------------------------------------- 345 (471)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhcCCCceEEEEecceEecccCCCeeeeccCCCCCCCCCCCcCCceeecCCc----------------------EEeee
Q 004261 463 YAKTVPNPTALLTFGGTVLNVRPSPVVAAFSSRGPNMVTPQILKPDVIGPGVN----------------------ILAAW 520 (765)
Q Consensus 463 ~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~lKPDi~APG~~----------------------I~sa~ 520 (765)
.+.++.||++||+. |||+|||++ |++++
T Consensus 346 -----------------------~~~~a~fS~~G~~~-------~di~APG~~i~~~~~~g~~~~~~~~~~~~~~i~s~~ 395 (471)
T 3t41_A 346 -----------------------KSNLSEFSNFGMNY-------TDIAAPGGSFAYLNQFGVDKWMNEGYMHKENILTTA 395 (471)
T ss_dssp -----------------------TSSBCTTCCBCTTT-------CCEEEECCCCHHHHHHHHHHHHHTTTHHHHSEEEEC
T ss_pred -----------------------CCCCCCccCCCCCC-------CeEEecCCCcccccccccccccccccccCceeEecC
Confidence 12578999999964 599999987 88888
Q ss_pred cCCCCCCCcccCccceeeEEeccccchhhhhhhHHHHHHhhCC-CCCHHHHHHHHHhcceeccCCCCCCCCCCCCCCCCC
Q 004261 521 TEASGPTELEKDTRRTKFNIMSGTSMSCPHLSGVAALLKAAHP-DWSPSAIKSALMTTAYVVDNTKSPLHDAADGRLSTP 599 (765)
Q Consensus 521 ~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P-~~sp~~ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~ 599 (765)
+.+ .|..++|||||||||||++|||+|++| .++|++||++|++||++... .++
T Consensus 396 ~~~-------------~~~~~sGTS~AaP~VAG~aAll~~~~p~~~~~~~v~~~L~~tA~~~~~-------------~~~ 449 (471)
T 3t41_A 396 NNG-------------RYIYQAGTALATPKVSGALALIIDKYHLEKHPDKAIELLYQHGTSKNN-------------KPF 449 (471)
T ss_dssp TTS-------------SEEEECSHHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHSBCCSC-------------CCH
T ss_pred CCC-------------CEEeecchHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhCCCCCC-------------CCc
Confidence 765 799999999999999999999999999 89999999999999987532 345
Q ss_pred CcCCCcccCccccCCC
Q 004261 600 WAHGSGHVNPQKAISP 615 (765)
Q Consensus 600 ~~~G~G~vd~~~Al~~ 615 (765)
..||||+||+.+|++.
T Consensus 450 ~~~G~G~vd~~~Al~~ 465 (471)
T 3t41_A 450 SRYGHGELDVYKALNV 465 (471)
T ss_dssp HHHTTCBBCHHHHTTT
T ss_pred CccccChhCHHHHHHH
Confidence 6899999999999984
No 7
>2p4e_P Proprotein convertase subtilisin/kexin type 9; protease, LDL receptor, LDL, endocytosis, hydrol; 1.98A {Homo sapiens}
Probab=100.00 E-value=2.8e-59 Score=535.38 Aligned_cols=339 Identities=21% Similarity=0.238 Sum_probs=61.3
Q ss_pred ceEEEEecCCCCCCcccchhHHHHHhhccccCCCCceEEEEcceeeEEEEEcCHHHHHHHHcCCCeEEEEEcceeccccC
Q 004261 26 QTYIVHMKHQAKPSTFSTHNDWYASSVQSLSSSTDSLLYTYNTAYNGFAASLDPDQAQALRQSDAVLGVYEDTLYTLHTT 105 (765)
Q Consensus 26 ~~yIV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~l~~~~~~~L~~~p~V~~v~~~~~~~~~~~ 105 (765)
++|||+||++........+.+++...+++.. ...++++.|++.|+||+++++++++++|+++|+|++||+++.++.+
T Consensus 76 g~YIV~lk~~~~~~~~~~~~~~l~a~~~~~g-~~~~v~~~y~~~~~Gfsv~l~~~~l~~L~~~P~V~~Vepd~~v~~~-- 152 (692)
T 2p4e_P 76 GTYVVVLKEETHLSQSERTARRLQAQAARRG-YLTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIEEDSSVFAQ-- 152 (692)
T ss_dssp EEEEEEECTTCCHHHHHHHHHHHHHHHHHTT-CCCEEEEEECSSSCEEEEECCGGGHHHHHTSTTEEEEEEEEEEEEC--
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHHHHhhcc-cccceeeEeeccccEEEEEeCHHHHHHHHcCCCceEEEeccccccC--
Confidence 4899999998876555555555554433322 2368999999999999999999999999999999999999988652
Q ss_pred CCCcccccccCCCCCCCccccccCCCCCCcEEEEeccCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCceeEee
Q 004261 106 RSPQFLGISSDFGLSAGYSKLDFDKASLDVIIGVLDTGVWPESKSFDDSAMPEVPTKWRGQCESGPDFSPKLCNKKLIGA 185 (765)
Q Consensus 106 ~s~~~~g~~~~~~~~~~~~~~~~~~~G~gV~VaVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~~~~~~~n~kiig~ 185 (765)
...|++.++.........|..+.+|+||+|||||||||++||+|.+... |. +|
T Consensus 153 --~~pWgL~~i~~~~~~~~~w~~~~~G~GV~VaVIDTGId~~HpdL~gr~~------~~-------~~------------ 205 (692)
T 2p4e_P 153 --SIPWNLERITPPRYRADEYQPPDGGSLVEVYLLDTSIQSDHREIEGRVM------VT-------DF------------ 205 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --CCCcchhhcccccccccccccCCCCCCcEEEEEcCCCCCCChhhcCceE------ec-------cc------------
Confidence 2236776654321122368888999999999999999999999975410 10 01
Q ss_pred eeccccccccCCCCCCCCCCCCCCCCCCCCchhhHHhhccCCCCccCcccccCcceeeecCCCeEEEEEeeccCC-CChH
Q 004261 186 RFFSKGYHMAGGSFSKKPNEPESPRDYDGHGTHTASTAAGVPVANASLLGYASGVARGMATHARVATYKVCWKTG-CFGS 264 (765)
Q Consensus 186 ~~~~~g~~~~~~~~~~~~~~~~~~~d~~gHGThVAgi~Ag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~ 264 (765)
++... .++ ......+.|.+||||||||||+|+. .||||+|+|+++|++++.| ++.+
T Consensus 206 -~~~~d---~dg-----~~~~~~~~D~~GHGTHVAGiIAg~~--------------~GVAP~A~L~~vKVl~~~G~g~~s 262 (692)
T 2p4e_P 206 -ENVPE---EDG-----TRFHRQASKCDSHGTHLAGVVSGRD--------------AGVAKGASMRSLRVLNCQGKGTVS 262 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -ccccC---CCC-----CcccCCCCCCCCcHHHhhhHhhcCC--------------CccCCCCEEEEEEeecCCCCCCHH
Confidence 00000 000 0001346789999999999999873 6999999999999998877 7888
Q ss_pred HHHHHHHHHHhC------CCcEEEeccCCCCCCCcccHHHHHHHHHHhCCcEEEEecCCCCCCCC-CcccCCCceEEEcc
Q 004261 265 DILAGIDRAIQD------GVDVLSMSLGGGSAPYYRDTIAVGAFAAMEKGIVVSCSAGNSGPTKA-SLANVAPWILTVGA 337 (765)
Q Consensus 265 ~i~~ai~~a~~~------g~dVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~-~~~~~ap~vitVgA 337 (765)
++++||+|++++ +++|||||||+... +.+..++.++.++|++||+||||+|.... ..++.+|++|+|||
T Consensus 263 ~ii~aI~~a~~~~~~~~~g~~VINmSlGg~~s----~~l~~Ai~~A~~~GVlvVaAAGN~G~~~~~~sPA~~~~vItVGA 338 (692)
T 2p4e_P 263 GTLIGLEFIRKSQLVQPVGPLVVLLPLAGGYS----RVLNAACQRLARAGVVLVTAAGNFRDDACLYSPASAPEVITVGA 338 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHhhhhcccCCceEEEecCCCCCc----HHHHHHHHHHHHCCCEEEEECCCCCCCCCccCcccCCCEEEEEE
Confidence 999999999986 89999999997533 34555666888999999999999998764 34788999999999
Q ss_pred CCCCCceeEEEEeCCceeEEeEeeccCCCCCCeeEEEEEecCCCCCCCCCCCCCCCCCCCcccCeEEEEeCCCcchhhhh
Q 004261 338 GTLDRDFPAYVFLGNKKKATGVSLYSGNGMGNKPVSLVYNKGSNGSSSSNLCLPGSLQPELVRGKVVICDRGINARVEKG 417 (765)
Q Consensus 338 st~d~~~~~~~~~~~g~~~~~~s~~~~~~~~~~~~~~v~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~ 417 (765)
++.+...
T Consensus 339 ~d~~~~~------------------------------------------------------------------------- 345 (692)
T 2p4e_P 339 TNAQDQP------------------------------------------------------------------------- 345 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EcCCCCc-------------------------------------------------------------------------
Confidence 5432110
Q ss_pred HHHhhcCccEEEEeecCCCCccccccCccccEEEEchhhHHHHHHHHhcCCCceEEEEecceEecccCCCeeeeccCCCC
Q 004261 418 AVVRDAGGVGMILANTAASGEELVADSHLLPAVAIGRKMGDIVREYAKTVPNPTALLTFGGTVLNVRPSPVVAAFSSRGP 497 (765)
Q Consensus 418 ~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~v~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp 497 (765)
...-+.||++||
T Consensus 346 --------------------------------------------------------------------a~~ss~fSn~G~ 357 (692)
T 2p4e_P 346 --------------------------------------------------------------------VTLGTLGTNFGR 357 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------cccccccCCCCC
Confidence 000123899998
Q ss_pred CCCCCCCcCCceeecCCcEEeeecCCCCCCCcccCccceeeEEeccccchhhhhhhHHHHHHhhCCCCCHHHHHHHHHhc
Q 004261 498 NMVTPQILKPDVIGPGVNILAAWTEASGPTELEKDTRRTKFNIMSGTSMSCPHLSGVAALLKAAHPDWSPSAIKSALMTT 577 (765)
Q Consensus 498 ~~~~~~~lKPDi~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~sp~~ik~~L~~T 577 (765)
||||+|||++|+++++.... .|..++|||||||||||++|||++++|+|+|+|||++|++|
T Consensus 358 --------~vDI~APG~~I~St~~~~~~-----------~y~~~SGTSmAAPhVAG~aALlls~~P~ltp~qVk~~L~~t 418 (692)
T 2p4e_P 358 --------CVDLFAPGEDIIGASSDCST-----------CFVSQSGTSQAAAHVAGIAAMMLSAEPELTLAELRQRLIHF 418 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------ceeEEecCCcEEeeccCCCC-----------ceEeccchHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHh
Confidence 46999999999999886422 78999999999999999999999999999999999999999
Q ss_pred ceec
Q 004261 578 AYVV 581 (765)
Q Consensus 578 A~~~ 581 (765)
|.+.
T Consensus 419 A~~~ 422 (692)
T 2p4e_P 419 SAKD 422 (692)
T ss_dssp ----
T ss_pred cccc
Confidence 9764
No 8
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=100.00 E-value=1.2e-55 Score=495.18 Aligned_cols=387 Identities=22% Similarity=0.300 Sum_probs=278.3
Q ss_pred ccccccCCCCCCCccccccCCCCCCcEEEEeccCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCceeEeeeecc
Q 004261 110 FLGISSDFGLSAGYSKLDFDKASLDVIIGVLDTGVWPESKSFDDSAMPEVPTKWRGQCESGPDFSPKLCNKKLIGARFFS 189 (765)
Q Consensus 110 ~~g~~~~~~~~~~~~~~~~~~~G~gV~VaVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~~~~~~~n~kiig~~~~~ 189 (765)
.|+++.+.. +.+|..+ |+||+|||||||||++||+|.+. ++..+++.
T Consensus 5 ~W~l~~i~~----~~~w~~~--g~gv~VaViDtGvd~~Hp~l~~~---------------------------~~~~~~~~ 51 (441)
T 1y9z_A 5 PWGQTFVGA----TVLSDSQ--AGNRTICIIDSGYDRSHNDLNAN---------------------------NVTGTNNS 51 (441)
T ss_dssp CHHHHHTTC----SSSCCTT--GGGCEEEEEESCCCTTSTTTTTS---------------------------EEEECCCT
T ss_pred CCChhhcCh----hhhhhcC--CCCcEEEEEcCCCCCCChhHhcC---------------------------cccCcccC
Confidence 467766544 6689764 77999999999999999999742 12222221
Q ss_pred ccccccCCCCCCCCCCCCCCCCCCCCchhhHHhhccCCCCccCcccccCcceeeecCCC--eEEEEEeeccCC-CChHHH
Q 004261 190 KGYHMAGGSFSKKPNEPESPRDYDGHGTHTASTAAGVPVANASLLGYASGVARGMATHA--RVATYKVCWKTG-CFGSDI 266 (765)
Q Consensus 190 ~g~~~~~~~~~~~~~~~~~~~d~~gHGThVAgi~Ag~~~~~~~~~G~~~g~~~GvAP~A--~l~~~kv~~~~g-~~~~~i 266 (765)
. ..++..+.|..||||||||||+|..++ .| +.||||+| +|+.+|++++.| +..+++
T Consensus 52 ~------------~~~~~~~~d~~gHGT~vAgiia~~~~~----~g-----~~GvAP~a~~~l~~~kv~~~~g~~~~~~~ 110 (441)
T 1y9z_A 52 G------------TGNWYQPGNNNAHGTHVAGTIAAIANN----EG-----VVGVMPNQNANIHIVKVFNEAGWGYSSSL 110 (441)
T ss_dssp T------------SCCTTCCCSSCCHHHHHHHHHHCCCSS----SB-----CCCSSCSSCSEEEEEECEETTEECCSSCH
T ss_pred C------------CCCCCCCCCCCCcHHHHHHHHhcccCC----CC-----ceEecCCCCCEEEEEEEeCCCCCcCHHHH
Confidence 1 011234678899999999999997532 12 38999995 999999999887 888999
Q ss_pred HHHHHHHHhC-CCcEEEeccCCCCCCCcccHHHHHHHHHHhCCcEEEEecCCCCCCCCCcccCCCceEEEccCCCCCcee
Q 004261 267 LAGIDRAIQD-GVDVLSMSLGGGSAPYYRDTIAVGAFAAMEKGIVVSCSAGNSGPTKASLANVAPWILTVGAGTLDRDFP 345 (765)
Q Consensus 267 ~~ai~~a~~~-g~dVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~ap~vitVgAst~d~~~~ 345 (765)
++||+||+++ |+||||||||.... ...+..++.+|.++|++||+||||+|.....+++..+++|+|||++.+....
T Consensus 111 ~~ai~~a~~~~g~~Vin~S~G~~~~---~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~VgA~~~~~~~~ 187 (441)
T 1y9z_A 111 VAAIDTCVNSGGANVVTMSLGGSGS---TTTERNALNTHYNNGVLLIAAAGNAGDSSYSYPASYDSVMSVAAVDSNLDHA 187 (441)
T ss_dssp HHHHHHHHHTTCCSEEEECCCBSCC---BHHHHHHHHHHHHTTCEEEEECCSSSSSBCCBTTTSTTEEEEEEECTTCCBC
T ss_pred HHHHHHHHHhcCCcEEEeCCCCCCC---CHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCCCCCCCeEEEEEECCCCCCC
Confidence 9999999999 99999999998532 2356667778999999999999999998888899999999999987764321
Q ss_pred E-------------------EEEeCCce----eEEeEeeccCCCCCC-eeEE--EEEecCCC---CCCCCCCCCCC--CC
Q 004261 346 A-------------------YVFLGNKK----KATGVSLYSGNGMGN-KPVS--LVYNKGSN---GSSSSNLCLPG--SL 394 (765)
Q Consensus 346 ~-------------------~~~~~~g~----~~~~~s~~~~~~~~~-~~~~--~v~~~~~~---~~~~~~~c~~~--~~ 394 (765)
. ....+++. ++.+.+++....... ..++ +.|..... .......|... .+
T Consensus 188 ~~S~~g~~vdv~ApG~~i~s~~~~g~g~~~~~~~~G~s~~~~~~~p~~~~~~~~~~~~~~~~~g~~~~~~~~C~~~~~~~ 267 (441)
T 1y9z_A 188 AFSQYTDQVEISGPGEAILSTVTVGEGRLADITIGGQSYFSNGVVPHNRLTPSGTSYAPAPINASATGALAECTVNGTSF 267 (441)
T ss_dssp TTSCCCTTEEEEEECSSEEEECSTTCEEEEEEEETTEECGGGCCEECEEEEEETTEEEECCCCCEEEEEEEEEEEETTEE
T ss_pred ccccCCCceEEEeccCCeeccccCCCcccceeecccccccccccCcccccccCCccccccccccccccchhccccccccc
Confidence 1 11112221 122233322110000 0000 01111100 00112347643 44
Q ss_pred CCCcccCeEEEEeCCCc-----chhhhhHHHhhcCccEEEEeecCCCCcc------ccccCccccEEEEchhhHHHHHHH
Q 004261 395 QPELVRGKVVICDRGIN-----ARVEKGAVVRDAGGVGMILANTAASGEE------LVADSHLLPAVAIGRKMGDIVREY 463 (765)
Q Consensus 395 ~~~~~~gkivl~~~g~~-----~~~~~~~~~~~~Ga~g~i~~n~~~~~~~------~~~~~~~~p~~~v~~~~~~~l~~~ 463 (765)
+..+++|||++|+|+.| .+.+|..+++++|+.|+|++|+...... .......+|.+.|+..+|..|++|
T Consensus 268 ~~~~~~gkivl~~rg~~~~~~~~~~~~~~~~~~aGa~gvii~~~~~~~g~~~~~~~~~~~~~~~p~~~v~~~~g~~l~~~ 347 (441)
T 1y9z_A 268 SCGNMANKICLVERVGNQGSSYPEINSTKACKTAGAKGIIVYSNSALPGLQNPFLVDANSDITVPSVSVDRATGLALKAK 347 (441)
T ss_dssp ECCCCTTEEEEEECCSCSSSSCTHHHHHHHHHHTTCSEEEEECCTTSCSCCCCEEECTTCCCCSCEEEECHHHHHHHHTT
T ss_pred cCCCccccEEEEeccccCcccccHHHHHHHHHhcCCeEEEEEeCCCccccccccccccccCccccEEEEeHHHHHHHHHH
Confidence 67889999999999876 6788999999999999999987653111 123446799999999999999887
Q ss_pred HhcCCCceEEEEecceEecccCCCeeeeccCCCCCCCCCCCcCCceeecCCcEEeeecCCCCCCCcccCccceeeEEecc
Q 004261 464 AKTVPNPTALLTFGGTVLNVRPSPVVAAFSSRGPNMVTPQILKPDVIGPGVNILAAWTEASGPTELEKDTRRTKFNIMSG 543 (765)
Q Consensus 464 ~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~lKPDi~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sG 543 (765)
+.+. ++ + ++... ..|..+||
T Consensus 348 ~~~~----~t-----------------------------------~--------~~~~~-------------~~y~~~sG 367 (441)
T 1y9z_A 348 LGQS----TT-----------------------------------V--------SNQGN-------------QDYEYYNG 367 (441)
T ss_dssp TTSE----EE-----------------------------------E--------EEEEE-------------ESEEEECS
T ss_pred hcCC----cc-----------------------------------c--------ccccC-------------CCceeecc
Confidence 6321 10 0 11111 27999999
Q ss_pred ccchhhhhhhHHHHHHhhCCCCCHHHHHHHHHhcceeccCCCCCCCCCCCCCCCCCCcCCCcccCccccCCCCccccCCh
Q 004261 544 TSMSCPHLSGVAALLKAAHPDWSPSAIKSALMTTAYVVDNTKSPLHDAADGRLSTPWAHGSGHVNPQKAISPGLVYDAST 623 (765)
Q Consensus 544 TSmAaP~VAG~aALl~~~~P~~sp~~ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~G~G~vd~~~Al~~glv~~~~~ 623 (765)
||||||||||++|||+|+||+|+|++||++||+||++++..+ .+.+||+|+||+.+|+
T Consensus 368 TSmAaP~VAG~aALl~~~~p~~sp~~ik~~L~~TA~~~~~~g------------~~~~~G~G~vn~~~A~---------- 425 (441)
T 1y9z_A 368 TSMATPHVSGVATLVWSYHPECSASQVRAALNATADDLSVAG------------RDNQTGYGMINAVAAK---------- 425 (441)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHSBCCSSSS------------CBTTTBTCBCCHHHHH----------
T ss_pred cccCCcccchHHHHHHHHCCCCCHHHHHHHHHhhchhhccCC------------CcccccccccCHHHHH----------
Confidence 999999999999999999999999999999999999875432 3458999999999995
Q ss_pred hhHHHhhhccCCC
Q 004261 624 EDYVAFLCSLGYT 636 (765)
Q Consensus 624 ~d~~~~l~~~~~~ 636 (765)
||+.|||+++++
T Consensus 426 -~~~~~lc~~~~~ 437 (441)
T 1y9z_A 426 -AYLDESCTGPTD 437 (441)
T ss_dssp -HHHHHCTTCC--
T ss_pred -HHHHhhhcCCCC
Confidence 599999998764
No 9
>1r6v_A Subtilisin-like serine protease; sandwich domain, propeptide, hydrolase; 1.70A {Fervidobacterium pennivorans} SCOP: c.41.1.1
Probab=100.00 E-value=3.1e-55 Score=505.61 Aligned_cols=376 Identities=22% Similarity=0.261 Sum_probs=274.4
Q ss_pred cCCCceEEEEecCCCCCCcccchhHHHHHhhccccCCCCceEEEEcceeeEEEEEcCH----HHHHHHHc--CCCeEEEE
Q 004261 22 TAAKQTYIVHMKHQAKPSTFSTHNDWYASSVQSLSSSTDSLLYTYNTAYNGFAASLDP----DQAQALRQ--SDAVLGVY 95 (765)
Q Consensus 22 ~~~~~~yIV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~l~~----~~~~~L~~--~p~V~~v~ 95 (765)
+..+++|||+||+... .+++++... .++.+++. .+++++++++. +.+++|++ +|+|++||
T Consensus 28 ~~~~~~~IV~~k~~~~----------~~~~~~~~g---~~v~~~~~-~i~~~~~~~~~~~~~~~~~~l~~~~~~~V~~ve 93 (671)
T 1r6v_A 28 EYTEGKILVGYNDRSE----------VDKIVKAVN---GKVVLELP-QIKVVSIKLNGMTVKQAYDKIKALALKGIRYVE 93 (671)
T ss_dssp SBCTTEEEEEESSHHH----------HHHHHHHHT---CEEEEEEG-GGTEEEEECSSCCHHHHHHHHTTSCCSSEEEEE
T ss_pred ccCCccEEEEECCCcC----------HHHHHHhcC---CeEEEEcC-CCcEEEEEeCCcCHHHHHHHHHhccCCCceEEe
Confidence 4468999999997532 122233222 57778887 58999999864 33567764 89999999
Q ss_pred EcceeccccC----C-----------------------CCcccccccCCCCCCCccc-cccCCCCCCcEEEEeccCCCCC
Q 004261 96 EDTLYTLHTT----R-----------------------SPQFLGISSDFGLSAGYSK-LDFDKASLDVIIGVLDTGVWPE 147 (765)
Q Consensus 96 ~~~~~~~~~~----~-----------------------s~~~~g~~~~~~~~~~~~~-~~~~~~G~gV~VaVIDtGid~~ 147 (765)
|+..+++... . ....|++.. ++...+ |.. .+|+||+|||||||||++
T Consensus 94 pd~~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~l~~----I~~~~a~w~~-~tG~gV~VAVIDTGVd~~ 168 (671)
T 1r6v_A 94 PSYKRELIKPTVVKPNPDMYKIRKPGLNSTARDYGEELSNELWGLEA----IGVTQQLWEE-ASGTNIIVAVVDTGVDGT 168 (671)
T ss_dssp CCBCCEECCCEECCCCTTTTCSSSSCCSSSTTCCSSTTGGGCHHHHH----TTCCHHHHHH-CSCTTCEEEEEESCCBTT
T ss_pred cCeEEEeccccccCcccccccccccccccccccccccccccCCchhc----cCCchhhhhc-cCCCCCEEEEEeCCCCCC
Confidence 9987665310 0 001233333 334567 888 889999999999999999
Q ss_pred CCCCCCCCCCCCCcccccccccCCCCCCCCCCceeEeeeeccccccccCCCCCCCCCCCCCCCCCCCCchhhHHhhccCC
Q 004261 148 SKSFDDSAMPEVPTKWRGQCESGPDFSPKLCNKKLIGARFFSKGYHMAGGSFSKKPNEPESPRDYDGHGTHTASTAAGVP 227 (765)
Q Consensus 148 Hp~f~~~~~~~~~~~w~g~~~~g~~~~~~~~n~kiig~~~~~~g~~~~~~~~~~~~~~~~~~~d~~gHGThVAgi~Ag~~ 227 (765)
||+|.+. ++..+.+..+.... ...+..|.+||||||||||||..
T Consensus 169 HpdL~~~---------------------------~~~g~~~~~~~~~p---------~~~d~~d~~gHGThVAGiIAa~~ 212 (671)
T 1r6v_A 169 HPDLEGQ---------------------------VIAGYRPAFDEELP---------AGTDSSYGGSAGTHVAGTIAAKK 212 (671)
T ss_dssp SGGGTTT---------------------------BCCEEEGGGTEEEC---------TTCBCCTTCSHHHHHHHHHHCCC
T ss_pred Ccccccc---------------------------EEecccccCCCcCC---------CCCCCccCCCcchhhhhhhhccC
Confidence 9999753 11111111110000 01234567899999999999974
Q ss_pred CCccCcccccCcceeeecCCCeEEEEEeecc------CC-CChHHHHHHHHHHHhCCCcEEEeccCCCCCCCcccHHHHH
Q 004261 228 VANASLLGYASGVARGMATHARVATYKVCWK------TG-CFGSDILAGIDRAIQDGVDVLSMSLGGGSAPYYRDTIAVG 300 (765)
Q Consensus 228 ~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~------~g-~~~~~i~~ai~~a~~~g~dVIn~SlG~~~~~~~~~~~~~a 300 (765)
+ + .| +.||||+|+|+++|++++ .+ .....+++||+||+++|++|||||||+.. ....+..+
T Consensus 213 n-g---~g-----v~GVAP~A~I~~vkv~~~~~~~~g~g~~s~~~i~~ai~~A~~~gadVIN~SlG~~~---~s~~l~~A 280 (671)
T 1r6v_A 213 D-G---KG-----IVGVAPGAKIMPIVIFDDPALVGGNGYVGDDYVAAGIIWATDHGAKVMNHSWGGWG---YSYTMKEA 280 (671)
T ss_dssp S-S---SS-----CCCSCTTSEEEEEESBCCHHHHCTTSBCCHHHHHHHHHHHHHTTCSEEEECEEBSC---CCHHHHHH
T ss_pred C-C---Cc-----eEEECCCCEEEEEEeccCccccCCCCccCHHHHHHHHHHHHHcCCCEEEeCCCCCC---CCHHHHHH
Confidence 2 2 12 379999999999999976 23 34567899999999999999999999853 24567778
Q ss_pred HHHHHhCCcEEEEecCCCCCCC-CCcccCCCceEEEccCCCCCceeEEEEeCCceeEEeEeeccCCCCCCeeEEEEEecC
Q 004261 301 AFAAMEKGIVVSCSAGNSGPTK-ASLANVAPWILTVGAGTLDRDFPAYVFLGNKKKATGVSLYSGNGMGNKPVSLVYNKG 379 (765)
Q Consensus 301 ~~~a~~~Gi~vV~AAGN~G~~~-~~~~~~ap~vitVgAst~d~~~~~~~~~~~g~~~~~~s~~~~~~~~~~~~~~v~~~~ 379 (765)
+.+|.++|++||+||||+|... ..+++..|++|+|||.+.+..
T Consensus 281 i~~A~~~GvlvVaAAGN~g~~~~~~yPA~~~~VItVgA~d~~g~------------------------------------ 324 (671)
T 1r6v_A 281 FDYAMEHGVVMVVSAGNNTSDSHHQYPAGYPGVIQVAALDYYGG------------------------------------ 324 (671)
T ss_dssp HHHHHHTTCEEEEECCSCSSSCCCCBTTTSTTCEEEEEEEEETT------------------------------------
T ss_pred HHHHHhCCCEEEEeCCCCCCCCCccCcccCCCeEEEEEEcCCCC------------------------------------
Confidence 8899999999999999999765 567788999999998421110
Q ss_pred CCCCCCCCCCCCCCCCCCcccCeEEEEeCCCcchhhhhHHHhhcCccEEEEeecCCCCccccccCccccEEEEchhhHHH
Q 004261 380 SNGSSSSNLCLPGSLQPELVRGKVVICDRGINARVEKGAVVRDAGGVGMILANTAASGEELVADSHLLPAVAIGRKMGDI 459 (765)
Q Consensus 380 ~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~v~~~~~~~ 459 (765)
T Consensus 325 -------------------------------------------------------------------------------- 324 (671)
T 1r6v_A 325 -------------------------------------------------------------------------------- 324 (671)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhcCCCceEEEEecceEecccCCCeeeeccCCCCCCCCCCCcCCceeecCCcEEeeecCCCCCCC-----cccCcc
Q 004261 460 VREYAKTVPNPTALLTFGGTVLNVRPSPVVAAFSSRGPNMVTPQILKPDVIGPGVNILAAWTEASGPTE-----LEKDTR 534 (765)
Q Consensus 460 l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~lKPDi~APG~~I~sa~~~~~~~~~-----~~~~~~ 534 (765)
...++.|||+||.. ||+|||++|+++++....... ......
T Consensus 325 --------------------------~~~~a~fSn~G~~v--------dv~APG~~I~St~p~~~~~g~~~~~~~~~~~~ 370 (671)
T 1r6v_A 325 --------------------------TFRVAGFSSRSDGV--------SVGAPGVTILSTVPGEDSIGYEGHNENVPATN 370 (671)
T ss_dssp --------------------------EEEECSSSCCCTTE--------EEEEECSSEEEECCCTTSTTCCCCCTTCCCSS
T ss_pred --------------------------ceeeccccCCCCCe--------eEEecCCCEEeecCCCCccccccccccccccC
Confidence 01478999999965 999999999999876421100 000112
Q ss_pred ceeeEEeccccchhhhhhhHHHHHHhhCCCCCHHHHHHHHHhcceeccCCCCCCCCCCCCCCCCCCcCCCcccCccccCC
Q 004261 535 RTKFNIMSGTSMSCPHLSGVAALLKAAHPDWSPSAIKSALMTTAYVVDNTKSPLHDAADGRLSTPWAHGSGHVNPQKAIS 614 (765)
Q Consensus 535 ~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~sp~~ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~G~G~vd~~~Al~ 614 (765)
...|..++|||||||||||++|||+|++|+|+|.+||++|++||+++... ..+..||||+||+.+|++
T Consensus 371 ~~~y~~~sGTSmAAP~VAGvaALl~s~~P~lt~~~Vr~~L~~TA~~~~~~------------g~d~~~G~G~vna~~Al~ 438 (671)
T 1r6v_A 371 GGTYDYYQGTSMAAPHVTGVVAVLLQKFPNAKPWQIRKLLENTAFDFNGN------------GWDHDTGYGLVKLDAALQ 438 (671)
T ss_dssp SCCEEEEESHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBCSSSS------------SCBTTTBTCBCCHHHHHH
T ss_pred CCceEEecCccHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhCcCCCCC------------CCCCCcccceeCHHHHhh
Confidence 33799999999999999999999999999999999999999999976432 234589999999999999
Q ss_pred CCccccCChhhH
Q 004261 615 PGLVYDASTEDY 626 (765)
Q Consensus 615 ~glv~~~~~~d~ 626 (765)
..|..+....+|
T Consensus 439 ~~l~~~~~~~~~ 450 (671)
T 1r6v_A 439 GPLPTQGGVEEF 450 (671)
T ss_dssp CCCCSSSEEEEE
T ss_pred hhcCCCCCccce
Confidence 877766554333
No 10
>1dbi_A AK.1 serine protease; hydrolase; 1.80A {Bacillus SP} SCOP: c.41.1.1
Probab=100.00 E-value=6e-52 Score=436.86 Aligned_cols=267 Identities=31% Similarity=0.383 Sum_probs=216.0
Q ss_pred ccccccCCCCCCCccccccCCCCCCcEEEEeccCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCceeEeeeecc
Q 004261 110 FLGISSDFGLSAGYSKLDFDKASLDVIIGVLDTGVWPESKSFDDSAMPEVPTKWRGQCESGPDFSPKLCNKKLIGARFFS 189 (765)
Q Consensus 110 ~~g~~~~~~~~~~~~~~~~~~~G~gV~VaVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~~~~~~~n~kiig~~~~~ 189 (765)
.|++..+ +...+|..+..|+||+|||||||||++||+|.+ +++..++|.
T Consensus 12 ~w~l~~i----~~~~aw~~~~g~~gv~VaViDtGvd~~hp~l~~---------------------------~~~~~~~~~ 60 (280)
T 1dbi_A 12 QYGPQNT----YTDYAWDVTKGSSGQEIAVIDTGVDYTHPDLDG---------------------------KVIKGYDFV 60 (280)
T ss_dssp CCTTGGG----THHHHTTTCCCCTTCEEEEEESCCCTTSTTTTT---------------------------TEEEEEETT
T ss_pred CCChhhc----CcHHHHhhcCCCCCCEEEEEeCCcCCCChhhcc---------------------------Ccccceecc
Confidence 3666554 346799998888899999999999999999964 345555665
Q ss_pred ccccccCCCCCCCCCCCCCCCCCCCCchhhHHhhccCCCCccCcccccCcceeeecCCCeEEEEEeeccCC-CChHHHHH
Q 004261 190 KGYHMAGGSFSKKPNEPESPRDYDGHGTHTASTAAGVPVANASLLGYASGVARGMATHARVATYKVCWKTG-CFGSDILA 268 (765)
Q Consensus 190 ~g~~~~~~~~~~~~~~~~~~~d~~gHGThVAgi~Ag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ 268 (765)
+. ...+.|..||||||||||+|...+... +.||||+|+|+.+|+++..+ +..+++++
T Consensus 61 ~~--------------~~~~~d~~gHGT~vAgiia~~~~~~~g--------~~GvAp~a~l~~~kv~~~~g~~~~~~i~~ 118 (280)
T 1dbi_A 61 DN--------------DYDPMDLNNHGTHVAGIAAAETNNATG--------IAGMAPNTRILAVRALDRNGSGTLSDIAD 118 (280)
T ss_dssp TT--------------BSCCCCSSSHHHHHHHHHHCCCSSSSS--------CCCSSSSCEEEEEECCCTTSCCCHHHHHH
T ss_pred CC--------------CCCCCCCCCcHHHHHHHHhCcCCCCCc--------ceEeCCCCEEEEEEEECCCCCcCHHHHHH
Confidence 41 123568899999999999998654322 37999999999999998877 78899999
Q ss_pred HHHHHHhCCCcEEEeccCCCCCCCcccHHHHHHHHHHhCCcEEEEecCCCCCCCCCcccCCCceEEEccCCCCCceeEEE
Q 004261 269 GIDRAIQDGVDVLSMSLGGGSAPYYRDTIAVGAFAAMEKGIVVSCSAGNSGPTKASLANVAPWILTVGAGTLDRDFPAYV 348 (765)
Q Consensus 269 ai~~a~~~g~dVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~ap~vitVgAst~d~~~~~~~ 348 (765)
||+||++++++|||||||... ..+.+..++.++.++|++||+||||+|.....+++..+++|+|||.+.
T Consensus 119 ai~~a~~~g~~Vin~S~G~~~---~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~-------- 187 (280)
T 1dbi_A 119 AIIYAADSGAEVINLSLGCDC---HTTTLENAVNYAWNKGSVVVAAAGNNGSSTTFEPASYENVIAVGAVDQ-------- 187 (280)
T ss_dssp HHHHHHHTTCSEEEECCSSCC---CCHHHHHHHHHHHHTTCEEEEECCBC---------CCTTSEEEEEECT--------
T ss_pred HHHHHHHCCCCEEEeCCCCCC---CCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCccccCCeEEEEeeCC--------
Confidence 999999999999999999853 235677778889999999999999999887778889999999998321
Q ss_pred EeCCceeEEeEeeccCCCCCCeeEEEEEecCCCCCCCCCCCCCCCCCCCcccCeEEEEeCCCcchhhhhHHHhhcCccEE
Q 004261 349 FLGNKKKATGVSLYSGNGMGNKPVSLVYNKGSNGSSSSNLCLPGSLQPELVRGKVVICDRGINARVEKGAVVRDAGGVGM 428 (765)
Q Consensus 349 ~~~~g~~~~~~s~~~~~~~~~~~~~~v~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~ 428 (765)
T Consensus 188 -------------------------------------------------------------------------------- 187 (280)
T 1dbi_A 188 -------------------------------------------------------------------------------- 187 (280)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEeecCCCCccccccCccccEEEEchhhHHHHHHHHhcCCCceEEEEecceEecccCCCeeeeccCCCCCCCCCCCcCCc
Q 004261 429 ILANTAASGEELVADSHLLPAVAIGRKMGDIVREYAKTVPNPTALLTFGGTVLNVRPSPVVAAFSSRGPNMVTPQILKPD 508 (765)
Q Consensus 429 i~~n~~~~~~~~~~~~~~~p~~~v~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~lKPD 508 (765)
.+.++.||++||. ||
T Consensus 188 ---------------------------------------------------------~~~~~~~S~~G~~--------~d 202 (280)
T 1dbi_A 188 ---------------------------------------------------------YDRLASFSNYGTW--------VD 202 (280)
T ss_dssp ---------------------------------------------------------TSCBCTTBCCSTT--------CC
T ss_pred ---------------------------------------------------------CCCcCCCCCCCCC--------ce
Confidence 1257889999985 49
Q ss_pred eeecCCcEEeeecCCCCCCCcccCccceeeEEeccccchhhhhhhHHHHHHhhCCCCCHHHHHHHHHhcceeccCCCCCC
Q 004261 509 VIGPGVNILAAWTEASGPTELEKDTRRTKFNIMSGTSMSCPHLSGVAALLKAAHPDWSPSAIKSALMTTAYVVDNTKSPL 588 (765)
Q Consensus 509 i~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~sp~~ik~~L~~TA~~~~~~~~~~ 588 (765)
|+|||++|+++++.+ .|..++|||||||||||++|||++ |++++.|||++|++||+++..
T Consensus 203 v~ApG~~i~s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~--p~~t~~~v~~~L~~ta~~~~~----- 262 (280)
T 1dbi_A 203 VVAPGVDIVSTITGN-------------RYAYMSGTSMASPHVAGLAALLAS--QGRNNIEIRQAIEQTADKISG----- 262 (280)
T ss_dssp EEEECSSEEEEETTT-------------EEEEECSHHHHHHHHHHHHHHHHH--TTCCHHHHHHHHHHTSBCCTT-----
T ss_pred EEEecCCeEeecCCC-------------CEEEccCHHHHHHHHHHHHHHHHC--CCCCHHHHHHHHHHhCccCCC-----
Confidence 999999999998765 899999999999999999999987 899999999999999998642
Q ss_pred CCCCCCCCCCCCcCCCcccCccccCC
Q 004261 589 HDAADGRLSTPWAHGSGHVNPQKAIS 614 (765)
Q Consensus 589 ~~~~~~~~~~~~~~G~G~vd~~~Al~ 614 (765)
....||+|+||+.+|++
T Consensus 263 ---------~~~~~G~G~vn~~~A~~ 279 (280)
T 1dbi_A 263 ---------TGTYFKYGRINSYNAVT 279 (280)
T ss_dssp ---------BTTTBSSEECCHHHHHT
T ss_pred ---------CCCcccCCEECHHHHhc
Confidence 12479999999999986
No 11
>1gci_A Subtilisin; hydrolase, serine protease; 0.78A {Bacillus lentus} SCOP: c.41.1.1 PDB: 1jea_A 1ndq_A 1svn_A 1tk2_A* 3bx1_A 1ah2_A 1iav_A* 1c9m_A* 1wsd_A 1mpt_A 1ndu_A 1c9j_A 1q5p_A* 1st3_A 1c9n_A*
Probab=100.00 E-value=4e-52 Score=435.35 Aligned_cols=264 Identities=32% Similarity=0.469 Sum_probs=222.0
Q ss_pred ccccccCCCCCCCccccccCCCCCCcEEEEeccCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCceeEeeeecc
Q 004261 110 FLGISSDFGLSAGYSKLDFDKASLDVIIGVLDTGVWPESKSFDDSAMPEVPTKWRGQCESGPDFSPKLCNKKLIGARFFS 189 (765)
Q Consensus 110 ~~g~~~~~~~~~~~~~~~~~~~G~gV~VaVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~~~~~~~n~kiig~~~~~ 189 (765)
.|++..+. .+.+|..+++|+||+|+|||||| .+||+|+ +...++|.
T Consensus 5 ~W~l~~i~----~~~a~~~g~~G~gv~VaViDtGi-~~h~~l~-----------------------------~~~~~~~~ 50 (269)
T 1gci_A 5 PWGISRVQ----APAAHNRGLTGSGVKVAVLDTGI-STHPDLN-----------------------------IRGGASFV 50 (269)
T ss_dssp CHHHHHTT----HHHHHHTTCSCTTCEEEEEESCC-CCCTTCC-----------------------------EEEEEECS
T ss_pred CcChhhcC----cHHHHhcCCCCCCCEEEEECCCC-CCCHhhc-----------------------------ccCCcccC
Confidence 36666543 36799999999999999999999 8999984 23344444
Q ss_pred ccccccCCCCCCCCCCCCCCCCCCCCchhhHHhhccCCCCccCcccccCcceeeecCCCeEEEEEeeccCC-CChHHHHH
Q 004261 190 KGYHMAGGSFSKKPNEPESPRDYDGHGTHTASTAAGVPVANASLLGYASGVARGMATHARVATYKVCWKTG-CFGSDILA 268 (765)
Q Consensus 190 ~g~~~~~~~~~~~~~~~~~~~d~~gHGThVAgi~Ag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ 268 (765)
.+ ...+.|..||||||||||+|..+ + .| +.||||+|+|+.+|+++..+ +..+++++
T Consensus 51 ~~--------------~~~~~d~~gHGT~vAgiia~~~~-~---~~-----~~GvAp~a~l~~~~v~~~~g~~~~~~~~~ 107 (269)
T 1gci_A 51 PG--------------EPSTQDGNGHGTHVAGTIAALNN-S---IG-----VLGVAPSAELYAVKVLGASGSGSVSSIAQ 107 (269)
T ss_dssp TT--------------CCSCSCSSSHHHHHHHHHHCCCS-S---SB-----CCCSSTTCEEEEEECBCTTSCBCHHHHHH
T ss_pred CC--------------CCCCCCCCCChHHHHHHHhcCcC-C---CC-----cEEeCCCCEEEEEEeECCCCCcCHHHHHH
Confidence 31 12356789999999999999732 1 12 37999999999999998776 77889999
Q ss_pred HHHHHHhCCCcEEEeccCCCCCCCcccHHHHHHHHHHhCCcEEEEecCCCCCCCCCcccCCCceEEEccCCCCCceeEEE
Q 004261 269 GIDRAIQDGVDVLSMSLGGGSAPYYRDTIAVGAFAAMEKGIVVSCSAGNSGPTKASLANVAPWILTVGAGTLDRDFPAYV 348 (765)
Q Consensus 269 ai~~a~~~g~dVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~ap~vitVgAst~d~~~~~~~ 348 (765)
||+|+++++++|||||||.... ...+..++.++.++|++||+||||+|.....+++..+++|+|||.+.
T Consensus 108 ai~~a~~~~~~Vin~S~G~~~~---~~~~~~ai~~a~~~gv~vV~AaGN~g~~~~~~Pa~~~~vi~Vga~~~-------- 176 (269)
T 1gci_A 108 GLEWAGNNGMHVANLSLGSPSP---SATLEQAVNSATSRGVLVVAASGNSGAGSISYPARYANAMAVGATDQ-------- 176 (269)
T ss_dssp HHHHHHHTTCSEEEECCCBSSC---CHHHHHHHHHHHHTTCEEEEECCSSCCSSCCBTTTSTTEEEEEEECT--------
T ss_pred HHHHHHHCCCeEEEeCCCCCCC---CHHHHHHHHHHHHCCCEEEEecCCCCCCCCcCCccCCCeEEEEeecC--------
Confidence 9999999999999999998532 35677777889999999999999999888888899999999998321
Q ss_pred EeCCceeEEeEeeccCCCCCCeeEEEEEecCCCCCCCCCCCCCCCCCCCcccCeEEEEeCCCcchhhhhHHHhhcCccEE
Q 004261 349 FLGNKKKATGVSLYSGNGMGNKPVSLVYNKGSNGSSSSNLCLPGSLQPELVRGKVVICDRGINARVEKGAVVRDAGGVGM 428 (765)
Q Consensus 349 ~~~~g~~~~~~s~~~~~~~~~~~~~~v~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~ 428 (765)
T Consensus 177 -------------------------------------------------------------------------------- 176 (269)
T 1gci_A 177 -------------------------------------------------------------------------------- 176 (269)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEeecCCCCccccccCccccEEEEchhhHHHHHHHHhcCCCceEEEEecceEecccCCCeeeeccCCCCCCCCCCCcCCc
Q 004261 429 ILANTAASGEELVADSHLLPAVAIGRKMGDIVREYAKTVPNPTALLTFGGTVLNVRPSPVVAAFSSRGPNMVTPQILKPD 508 (765)
Q Consensus 429 i~~n~~~~~~~~~~~~~~~p~~~v~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~lKPD 508 (765)
.+.++.||++||.. |
T Consensus 177 ---------------------------------------------------------~~~~~~~S~~G~~~--------d 191 (269)
T 1gci_A 177 ---------------------------------------------------------NNNRASFSQYGAGL--------D 191 (269)
T ss_dssp ---------------------------------------------------------TSCBCTTCCCSTTE--------E
T ss_pred ---------------------------------------------------------CCCCCCCCCCCCCc--------c
Confidence 12568899999864 9
Q ss_pred eeecCCcEEeeecCCCCCCCcccCccceeeEEeccccchhhhhhhHHHHHHhhCCCCCHHHHHHHHHhcceeccCCCCCC
Q 004261 509 VIGPGVNILAAWTEASGPTELEKDTRRTKFNIMSGTSMSCPHLSGVAALLKAAHPDWSPSAIKSALMTTAYVVDNTKSPL 588 (765)
Q Consensus 509 i~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~sp~~ik~~L~~TA~~~~~~~~~~ 588 (765)
|+|||++|+++++.+ .|..++|||||||||||++|||+|++|+|++.|||++|++||+++.
T Consensus 192 i~APG~~i~s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~~~p~~t~~~v~~~L~~tA~~~g------ 252 (269)
T 1gci_A 192 IVAPGVNVQSTYPGS-------------TYASLNGTSMATPHVAGAAALVKQKNPSWSNVQIRNHLKNTATSLG------ 252 (269)
T ss_dssp EEEECSSEEEEETTT-------------EEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHTSBCCS------
T ss_pred eEecCCCeEeecCCC-------------CEEEcCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccCC------
Confidence 999999999998765 7999999999999999999999999999999999999999999762
Q ss_pred CCCCCCCCCCCCcCCCcccCccccCC
Q 004261 589 HDAADGRLSTPWAHGSGHVNPQKAIS 614 (765)
Q Consensus 589 ~~~~~~~~~~~~~~G~G~vd~~~Al~ 614 (765)
+++.||||+||+.+|++
T Consensus 253 ---------~~~~~G~G~vn~~~A~~ 269 (269)
T 1gci_A 253 ---------STNLYGSGLVNAEAATR 269 (269)
T ss_dssp ---------CHHHHTTCBCCHHHHTC
T ss_pred ---------CCCCcccCccCHHHHcC
Confidence 24589999999999985
No 12
>1r0r_E Subtilisin carlsberg; high resolution, serine protease, protein inhibitor, hydrolase; 1.10A {Bacillus licheniformis} SCOP: c.41.1.1 PDB: 1af4_A* 1be8_A* 1bfk_A 1bfu_A 1be6_A 1oyv_A 1cse_E 1sbc_A 1sca_A 1scb_A 1scd_A 2sec_E 2wuv_A 2wuw_E 1yu6_A 1scn_E* 1c3l_A 1avt_A* 1av7_A* 1sel_A ...
Probab=100.00 E-value=3.5e-52 Score=437.48 Aligned_cols=265 Identities=31% Similarity=0.460 Sum_probs=220.3
Q ss_pred ccccccCCCCCCCccccccCCCCCCcEEEEeccCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCceeEeeeecc
Q 004261 110 FLGISSDFGLSAGYSKLDFDKASLDVIIGVLDTGVWPESKSFDDSAMPEVPTKWRGQCESGPDFSPKLCNKKLIGARFFS 189 (765)
Q Consensus 110 ~~g~~~~~~~~~~~~~~~~~~~G~gV~VaVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~~~~~~~n~kiig~~~~~ 189 (765)
.|+++.+. .+.+|..+++|+||+|+|||||||++||+|+ +...++|.
T Consensus 5 ~w~l~~i~----~~~~~~~g~~G~gv~VaViDtGid~~h~~l~-----------------------------~~~g~~~~ 51 (274)
T 1r0r_E 5 PYGIPLIK----ADKVQAQGFKGANVKVAVLDTGIQASHPDLN-----------------------------VVGGASFV 51 (274)
T ss_dssp CTHHHHTT----HHHHHHHTCSCTTCEEEEEESCCCTTCTTCC-----------------------------EEEEEECS
T ss_pred CCchhhcC----CHHHHhcCCCCCCCEEEEEcCCCCCCCHhHc-----------------------------CCCCcccc
Confidence 36666543 3679999999999999999999999999994 23344444
Q ss_pred ccccccCCCCCCCCCCCCCCCCCCCCchhhHHhhccCCCCccCcccccCcceeeecCCCeEEEEEeeccCC-CChHHHHH
Q 004261 190 KGYHMAGGSFSKKPNEPESPRDYDGHGTHTASTAAGVPVANASLLGYASGVARGMATHARVATYKVCWKTG-CFGSDILA 268 (765)
Q Consensus 190 ~g~~~~~~~~~~~~~~~~~~~d~~gHGThVAgi~Ag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ 268 (765)
.+ ...+.|..||||||||||+|..+ + .| +.||||+|+|+.+|+++..+ +..+++++
T Consensus 52 ~~--------------~~~~~d~~gHGT~vAgiia~~~~-~---~g-----~~GvAp~a~l~~~~v~~~~g~~~~~~i~~ 108 (274)
T 1r0r_E 52 AG--------------EAYNTDGNGHGTHVAGTVAALDN-T---TG-----VLGVAPSVSLYAVKVLNSSGSGSYSGIVS 108 (274)
T ss_dssp TT--------------CCTTCCSSSHHHHHHHHHHCCSS-S---SB-----CCCSSTTSEEEEEECSCTTSEECHHHHHH
T ss_pred CC--------------CCCCCCCCCCHHHHHHHHHccCC-C---Cc-----eEEECCCCEEEEEEEECCCCCccHHHHHH
Confidence 31 12246788999999999999732 1 12 37999999999999998877 78889999
Q ss_pred HHHHHHhCCCcEEEeccCCCCCCCcccHHHHHHHHHHhCCcEEEEecCCCCCCC----CCcccCCCceEEEccCCCCCce
Q 004261 269 GIDRAIQDGVDVLSMSLGGGSAPYYRDTIAVGAFAAMEKGIVVSCSAGNSGPTK----ASLANVAPWILTVGAGTLDRDF 344 (765)
Q Consensus 269 ai~~a~~~g~dVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~----~~~~~~ap~vitVgAst~d~~~ 344 (765)
||+||++++++|||||||.... .+.+..++.++.++|++||+||||+|... ..+++..|++|+|||.+.
T Consensus 109 ai~~a~~~~~~Vin~S~G~~~~---~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~Pa~~~~vi~Vga~~~---- 181 (274)
T 1r0r_E 109 GIEWATTNGMDVINMSLGGASG---STAMKQAVDNAYARGVVVVAAAGNSGNSGSTNTIGYPAKYDSVIAVGAVDS---- 181 (274)
T ss_dssp HHHHHHHTTCSEEEECEEBSSC---CHHHHHHHHHHHHTTCEEEEECCSCCCCTTCCCCCBTTTSTTSEEEEEECT----
T ss_pred HHHHHHHcCCCEEEeCCCCCCC---cHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCccccCCCCCCcEEEEEEecC----
Confidence 9999999999999999998642 35677788889999999999999999763 355678889999998321
Q ss_pred eEEEEeCCceeEEeEeeccCCCCCCeeEEEEEecCCCCCCCCCCCCCCCCCCCcccCeEEEEeCCCcchhhhhHHHhhcC
Q 004261 345 PAYVFLGNKKKATGVSLYSGNGMGNKPVSLVYNKGSNGSSSSNLCLPGSLQPELVRGKVVICDRGINARVEKGAVVRDAG 424 (765)
Q Consensus 345 ~~~~~~~~g~~~~~~s~~~~~~~~~~~~~~v~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~G 424 (765)
T Consensus 182 -------------------------------------------------------------------------------- 181 (274)
T 1r0r_E 182 -------------------------------------------------------------------------------- 181 (274)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccEEEEeecCCCCccccccCccccEEEEchhhHHHHHHHHhcCCCceEEEEecceEecccCCCeeeeccCCCCCCCCCCC
Q 004261 425 GVGMILANTAASGEELVADSHLLPAVAIGRKMGDIVREYAKTVPNPTALLTFGGTVLNVRPSPVVAAFSSRGPNMVTPQI 504 (765)
Q Consensus 425 a~g~i~~n~~~~~~~~~~~~~~~p~~~v~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~ 504 (765)
.+.++.||++||.
T Consensus 182 -------------------------------------------------------------~~~~~~~S~~G~~------ 194 (274)
T 1r0r_E 182 -------------------------------------------------------------NSNRASFSSVGAE------ 194 (274)
T ss_dssp -------------------------------------------------------------TSCBCTTCCCSTT------
T ss_pred -------------------------------------------------------------CCCcCccCCCCCC------
Confidence 1256889999984
Q ss_pred cCCceeecCCcEEeeecCCCCCCCcccCccceeeEEeccccchhhhhhhHHHHHHhhCCCCCHHHHHHHHHhcceeccCC
Q 004261 505 LKPDVIGPGVNILAAWTEASGPTELEKDTRRTKFNIMSGTSMSCPHLSGVAALLKAAHPDWSPSAIKSALMTTAYVVDNT 584 (765)
Q Consensus 505 lKPDi~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~sp~~ik~~L~~TA~~~~~~ 584 (765)
|||+|||++|+++++.+ .|..++|||||||||||++|||+|++|+|++.|||++|++||+++.
T Consensus 195 --~di~APG~~i~s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~g-- 257 (274)
T 1r0r_E 195 --LEVMAPGAGVYSTYPTN-------------TYATLNGTSMASPHVAGAAALILSKHPNLSASQVRNRLSSTATYLG-- 257 (274)
T ss_dssp --EEEEEECSSEEEEETTT-------------EEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTCBCCS--
T ss_pred --ceEEeCCCCeEeecCCC-------------CEEEeccHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhCcccC--
Confidence 59999999999998865 8999999999999999999999999999999999999999999762
Q ss_pred CCCCCCCCCCCCCCCCcCCCcccCccccCC
Q 004261 585 KSPLHDAADGRLSTPWAHGSGHVNPQKAIS 614 (765)
Q Consensus 585 ~~~~~~~~~~~~~~~~~~G~G~vd~~~Al~ 614 (765)
+++.||||+||+.+|++
T Consensus 258 -------------~~~~~G~G~~~~~~A~~ 274 (274)
T 1r0r_E 258 -------------SSFYYGKGLINVEAAAQ 274 (274)
T ss_dssp -------------CHHHHTTCBCCHHHHTC
T ss_pred -------------CCCCcccCccCHHHHhC
Confidence 34589999999999985
No 13
>1to2_E Subtilisin BPN'; serine protease, hydrolase; HET: CIT 15P; 1.30A {Bacillus amyloliquefaciens} SCOP: c.41.1.1 PDB: 1tm1_E* 1tm3_E* 1tm4_E* 1lw6_E* 1tm7_E* 1tmg_E* 1to1_E* 1tm5_E* 1y1k_E* 1y33_E* 1y34_E* 1y3b_E* 1y3c_E* 1y3d_E* 1y3f_E* 1y48_E* 1y4a_E* 1y4d_E 1sup_A* 1sib_E ...
Probab=100.00 E-value=8.5e-52 Score=435.92 Aligned_cols=267 Identities=31% Similarity=0.467 Sum_probs=221.0
Q ss_pred ccccccCCCCCCCccccccCCCCCCcEEEEeccCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCceeEeeeecc
Q 004261 110 FLGISSDFGLSAGYSKLDFDKASLDVIIGVLDTGVWPESKSFDDSAMPEVPTKWRGQCESGPDFSPKLCNKKLIGARFFS 189 (765)
Q Consensus 110 ~~g~~~~~~~~~~~~~~~~~~~G~gV~VaVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~~~~~~~n~kiig~~~~~ 189 (765)
.|+++.+. ...+|..+++|+||+|||||||||++||+|+ +...++|.
T Consensus 5 ~w~l~~i~----~~~~~~~g~~G~gv~VaViDtGid~~h~~l~-----------------------------~~~g~~~~ 51 (281)
T 1to2_E 5 PYGVSQIK----APALHSQGYTGSNVKVAVIDSGIDSSHPDLK-----------------------------VAGGASMV 51 (281)
T ss_dssp CHHHHHTT----HHHHHHHTCSCTTCEEEEEESCCCTTCTTCC-----------------------------EEEEEECC
T ss_pred CcchhhcC----hHHHHhcCCCCCCCEEEEEcCCCCCCCHHHc-----------------------------CcCCcccc
Confidence 36666543 3679999999999999999999999999994 22333443
Q ss_pred ccccccCCCCCCCCCCCCCCCCCCCCchhhHHhhccCCCCccCcccccCcceeeecCCCeEEEEEeeccCC-CChHHHHH
Q 004261 190 KGYHMAGGSFSKKPNEPESPRDYDGHGTHTASTAAGVPVANASLLGYASGVARGMATHARVATYKVCWKTG-CFGSDILA 268 (765)
Q Consensus 190 ~g~~~~~~~~~~~~~~~~~~~d~~gHGThVAgi~Ag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ 268 (765)
.+ +.....|..||||||||||+|..+ + .| +.||||+|+|+.+|+++..+ +..+++++
T Consensus 52 ~~-------------~~~~~~d~~gHGT~vAgiia~~~~-~---~g-----~~GvAp~a~l~~~kv~~~~g~~~~~~i~~ 109 (281)
T 1to2_E 52 PS-------------ETNPFQDNNSHGTHVAGTVAALNN-S---IG-----VLGVAPSASLYAVKVLGADGSGQYSWIIN 109 (281)
T ss_dssp TT-------------CCCTTCCSSSHHHHHHHHHHCCSS-S---SS-----BCCSSTTSEEEEEECSCTTSEECHHHHHH
T ss_pred CC-------------CCCCCCCCCCcHHHHHHHHhccCC-C---Cc-----ceeeCCCCEEEEEEEeCCCCCccHHHHHH
Confidence 21 111236788999999999999732 1 12 37999999999999998777 77889999
Q ss_pred HHHHHHhCCCcEEEeccCCCCCCCcccHHHHHHHHHHhCCcEEEEecCCCCCCC----CCcccCCCceEEEccCCCCCce
Q 004261 269 GIDRAIQDGVDVLSMSLGGGSAPYYRDTIAVGAFAAMEKGIVVSCSAGNSGPTK----ASLANVAPWILTVGAGTLDRDF 344 (765)
Q Consensus 269 ai~~a~~~g~dVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~----~~~~~~ap~vitVgAst~d~~~ 344 (765)
||+|+++++++|||||||.... .+.+..++.++.++|++||+||||+|... ..+++..|++|+|||.+.
T Consensus 110 ai~~a~~~~~~Vin~S~G~~~~---~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~Pa~~~~vi~Vga~~~---- 182 (281)
T 1to2_E 110 GIEWAIANNMDVINMSLGGPSG---SAALKAAVDKAVASGVVVVAAAGNEGTSGSSSTVGYPGKYPSVIAVGAVDS---- 182 (281)
T ss_dssp HHHHHHHTTCSEEEECEEBSCC---CHHHHHHHHHHHHTTCEEEEECCSCCCCTTSCCCCBTTTSTTSEEEEEECT----
T ss_pred HHHHHHHCCCcEEEECCcCCCC---CHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCccccCcCCCCEEEEEEecC----
Confidence 9999999999999999998532 35677788889999999999999999763 356778899999998321
Q ss_pred eEEEEeCCceeEEeEeeccCCCCCCeeEEEEEecCCCCCCCCCCCCCCCCCCCcccCeEEEEeCCCcchhhhhHHHhhcC
Q 004261 345 PAYVFLGNKKKATGVSLYSGNGMGNKPVSLVYNKGSNGSSSSNLCLPGSLQPELVRGKVVICDRGINARVEKGAVVRDAG 424 (765)
Q Consensus 345 ~~~~~~~~g~~~~~~s~~~~~~~~~~~~~~v~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~G 424 (765)
T Consensus 183 -------------------------------------------------------------------------------- 182 (281)
T 1to2_E 183 -------------------------------------------------------------------------------- 182 (281)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccEEEEeecCCCCccccccCccccEEEEchhhHHHHHHHHhcCCCceEEEEecceEecccCCCeeeeccCCCCCCCCCCC
Q 004261 425 GVGMILANTAASGEELVADSHLLPAVAIGRKMGDIVREYAKTVPNPTALLTFGGTVLNVRPSPVVAAFSSRGPNMVTPQI 504 (765)
Q Consensus 425 a~g~i~~n~~~~~~~~~~~~~~~p~~~v~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~ 504 (765)
.+.++.||++||.
T Consensus 183 -------------------------------------------------------------~~~~~~fS~~G~~------ 195 (281)
T 1to2_E 183 -------------------------------------------------------------SNQRASFSSVGPE------ 195 (281)
T ss_dssp -------------------------------------------------------------TSCBCTTCCCSTT------
T ss_pred -------------------------------------------------------------CCCcCCcCCCCCC------
Confidence 1257889999985
Q ss_pred cCCceeecCCcEEeeecCCCCCCCcccCccceeeEEeccccchhhhhhhHHHHHHhhCCCCCHHHHHHHHHhcceeccCC
Q 004261 505 LKPDVIGPGVNILAAWTEASGPTELEKDTRRTKFNIMSGTSMSCPHLSGVAALLKAAHPDWSPSAIKSALMTTAYVVDNT 584 (765)
Q Consensus 505 lKPDi~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~sp~~ik~~L~~TA~~~~~~ 584 (765)
|||+|||++|+++++.+ .|..++|||||||||||++|||+|++|+|+++|||++|++||+++.
T Consensus 196 --~di~APG~~i~s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~g-- 258 (281)
T 1to2_E 196 --LDVMAPGVSIQSTLPGN-------------KYGAYNGTSMASPHVAGAAALILSKHPNWTNTQVRSSLENTTTKLG-- 258 (281)
T ss_dssp --CCEEEECSSEEEEETTT-------------EEEEECBHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHTTCBCCS--
T ss_pred --ceEEecCCCeEeecCCC-------------CEEecCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHhhCcccC--
Confidence 49999999999998765 7999999999999999999999999999999999999999999762
Q ss_pred CCCCCCCCCCCCCCCCcCCCcccCccccCCC
Q 004261 585 KSPLHDAADGRLSTPWAHGSGHVNPQKAISP 615 (765)
Q Consensus 585 ~~~~~~~~~~~~~~~~~~G~G~vd~~~Al~~ 615 (765)
+++.||||+||+.+|+++
T Consensus 259 -------------~~~~~G~G~v~~~~a~~~ 276 (281)
T 1to2_E 259 -------------DSFYYGKGLINVQAAAQH 276 (281)
T ss_dssp -------------CHHHHTTCBCCHHHHTSS
T ss_pred -------------CCCCcccceecHHHHhhh
Confidence 345899999999999874
No 14
>1thm_A Thermitase; hydrolase(serine protease); 1.37A {Thermoactinomyces vulgaris} SCOP: c.41.1.1 PDB: 2tec_E 1tec_E 3tec_E
Probab=100.00 E-value=3.3e-51 Score=431.20 Aligned_cols=266 Identities=30% Similarity=0.410 Sum_probs=222.2
Q ss_pred ccccccCCCCCCCccccccCCCCCCcEEEEeccCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCceeEeeeecc
Q 004261 110 FLGISSDFGLSAGYSKLDFDKASLDVIIGVLDTGVWPESKSFDDSAMPEVPTKWRGQCESGPDFSPKLCNKKLIGARFFS 189 (765)
Q Consensus 110 ~~g~~~~~~~~~~~~~~~~~~~G~gV~VaVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~~~~~~~n~kiig~~~~~ 189 (765)
.|+++.+ +...+|... +|+||+|||||||||++||+|.+ +++..++|.
T Consensus 12 ~w~l~~i----~~~~aw~~~-~G~gv~VaViDtGvd~~h~~l~~---------------------------~~~~~~~~~ 59 (279)
T 1thm_A 12 QYGPQKI----QAPQAWDIA-EGSGAKIAIVDTGVQSNHPDLAG---------------------------KVVGGWDFV 59 (279)
T ss_dssp CCHHHHT----THHHHHTTC-CCTTCEEEEEESCCCTTCTTTTT---------------------------TEEEEEETT
T ss_pred ccChhhC----ChHHHHhcC-CCCCCEEEEEccCCCCCCcchhc---------------------------Ccccccccc
Confidence 3556543 336789876 69999999999999999999964 355556665
Q ss_pred ccccccCCCCCCCCCCCCCCCCCCCCchhhHHhhccCCCCccCcccccCcceeeecCCCeEEEEEeeccCC-CChHHHHH
Q 004261 190 KGYHMAGGSFSKKPNEPESPRDYDGHGTHTASTAAGVPVANASLLGYASGVARGMATHARVATYKVCWKTG-CFGSDILA 268 (765)
Q Consensus 190 ~g~~~~~~~~~~~~~~~~~~~d~~gHGThVAgi~Ag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ 268 (765)
++ ...+.|..||||||||||+|...++.. +.||||+|+|+.+|+++..| +..+++++
T Consensus 60 ~~--------------~~~~~d~~gHGT~vAgiia~~~~n~~g--------~~GvAp~a~l~~~~v~~~~g~~~~~~~~~ 117 (279)
T 1thm_A 60 DN--------------DSTPQNGNGHGTHCAGIAAAVTNNSTG--------IAGTAPKASILAVRVLDNSGSGTWTAVAN 117 (279)
T ss_dssp TT--------------BSCCCCSSSHHHHHHHHHHCCCSSSSS--------CCCSSTTCEEEEEECSCTTSCCCHHHHHH
T ss_pred CC--------------CCCCCCCCCcHHHHHHHHhCccCCCCc--------cEEeCCCCEEEEEEeeCCCCCccHHHHHH
Confidence 42 123577899999999999998654322 37999999999999998876 78889999
Q ss_pred HHHHHHhCCCcEEEeccCCCCCCCcccHHHHHHHHHHhCCcEEEEecCCCCCCCCCcccCCCceEEEccCCCCCceeEEE
Q 004261 269 GIDRAIQDGVDVLSMSLGGGSAPYYRDTIAVGAFAAMEKGIVVSCSAGNSGPTKASLANVAPWILTVGAGTLDRDFPAYV 348 (765)
Q Consensus 269 ai~~a~~~g~dVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~ap~vitVgAst~d~~~~~~~ 348 (765)
||+||++++++|||||||.... .+.+..++.++.++|+++|+||||+|.....+++..+++|+|||++.
T Consensus 118 ai~~a~~~g~~Vin~S~G~~~~---~~~l~~ai~~a~~~gvlvV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~-------- 186 (279)
T 1thm_A 118 GITYAADQGAKVISLSLGGTVG---NSGLQQAVNYAWNKGSVVVAAAGNAGNTAPNYPAYYSNAIAVASTDQ-------- 186 (279)
T ss_dssp HHHHHHHTTCSEEEECCCBSSC---CHHHHHHHHHHHHTTCEEEEECCSSSSCCCCBTTTSTTEEEEEEECT--------
T ss_pred HHHHHHHCCCCEEEEecCCCCC---CHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCcccCCCeEEEEEeCC--------
Confidence 9999999999999999998632 35677778889999999999999999888888889999999998321
Q ss_pred EeCCceeEEeEeeccCCCCCCeeEEEEEecCCCCCCCCCCCCCCCCCCCcccCeEEEEeCCCcchhhhhHHHhhcCccEE
Q 004261 349 FLGNKKKATGVSLYSGNGMGNKPVSLVYNKGSNGSSSSNLCLPGSLQPELVRGKVVICDRGINARVEKGAVVRDAGGVGM 428 (765)
Q Consensus 349 ~~~~g~~~~~~s~~~~~~~~~~~~~~v~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~ 428 (765)
T Consensus 187 -------------------------------------------------------------------------------- 186 (279)
T 1thm_A 187 -------------------------------------------------------------------------------- 186 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEeecCCCCccccccCccccEEEEchhhHHHHHHHHhcCCCceEEEEecceEecccCCCeeeeccCCCCCCCCCCCcCCc
Q 004261 429 ILANTAASGEELVADSHLLPAVAIGRKMGDIVREYAKTVPNPTALLTFGGTVLNVRPSPVVAAFSSRGPNMVTPQILKPD 508 (765)
Q Consensus 429 i~~n~~~~~~~~~~~~~~~p~~~v~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~lKPD 508 (765)
.+.++.||++||. ||
T Consensus 187 ---------------------------------------------------------~~~~~~fS~~G~~--------~d 201 (279)
T 1thm_A 187 ---------------------------------------------------------NDNKSSFSTYGSW--------VD 201 (279)
T ss_dssp ---------------------------------------------------------TSCBCTTCCCCTT--------CC
T ss_pred ---------------------------------------------------------CCCcCCcCCCCCc--------eE
Confidence 1256889999985 49
Q ss_pred eeecCCcEEeeecCCCCCCCcccCccceeeEEeccccchhhhhhhHHHHHHhhCCCCCHHHHHHHHHhcceeccCCCCCC
Q 004261 509 VIGPGVNILAAWTEASGPTELEKDTRRTKFNIMSGTSMSCPHLSGVAALLKAAHPDWSPSAIKSALMTTAYVVDNTKSPL 588 (765)
Q Consensus 509 i~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~sp~~ik~~L~~TA~~~~~~~~~~ 588 (765)
|+|||++|+++++.+ .|..++|||||||||||++||| ++|.+++++||++|++||+++...+
T Consensus 202 v~APG~~i~s~~~~~-------------~~~~~sGTS~AaP~VaG~aAll--~~p~~t~~~v~~~L~~ta~~~~~~~--- 263 (279)
T 1thm_A 202 VAAPGSSIYSTYPTS-------------TYASLSGTSMATPHVAGVAGLL--ASQGRSASNIRAAIENTADKISGTG--- 263 (279)
T ss_dssp EEEECSSEEEEETTT-------------EEEEECSHHHHHHHHHHHHHHH--HTTTCCHHHHHHHHHHTCBCCTTBT---
T ss_pred EEEcCCCeEEEeCCC-------------CEEEcccHHHHHHHHHHHHHHH--HCCCcCHHHHHHHHHHhCccCCCCC---
Confidence 999999999998865 8999999999999999999999 5899999999999999999874321
Q ss_pred CCCCCCCCCCCCcCCCcccCccccCC
Q 004261 589 HDAADGRLSTPWAHGSGHVNPQKAIS 614 (765)
Q Consensus 589 ~~~~~~~~~~~~~~G~G~vd~~~Al~ 614 (765)
..||+|+||+.+|++
T Consensus 264 -----------~~~G~G~vn~~~A~~ 278 (279)
T 1thm_A 264 -----------TYWAKGRVNAYKAVQ 278 (279)
T ss_dssp -----------TTBSSEECCHHHHHH
T ss_pred -----------ccccCCeeCHHHHhc
Confidence 379999999999975
No 15
>2x8j_A Intracellular subtilisin protease; hydrolase, serine protease, intracellular proteinase regulat; HET: CSX 1PE; 1.56A {Bacillus clausii} PDB: 2wv7_A 2wwt_A 2xrm_A*
Probab=100.00 E-value=1.7e-51 Score=442.83 Aligned_cols=273 Identities=25% Similarity=0.373 Sum_probs=221.3
Q ss_pred cccccccCCCCCCCccccccCCCCCCcEEEEeccCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCceeEeeeec
Q 004261 109 QFLGISSDFGLSAGYSKLDFDKASLDVIIGVLDTGVWPESKSFDDSAMPEVPTKWRGQCESGPDFSPKLCNKKLIGARFF 188 (765)
Q Consensus 109 ~~~g~~~~~~~~~~~~~~~~~~~G~gV~VaVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~~~~~~~n~kiig~~~~ 188 (765)
..|+++.+. .+.+|..+++|+||+|||||||||++||+|.+ +++..++|
T Consensus 21 ~~w~l~~i~----~~~aw~~~~~G~gv~VaViDtGid~~Hp~l~~---------------------------~~~~~~~~ 69 (327)
T 2x8j_A 21 VPMGVEIVE----APAVWRASAKGAGQIIGVIDTGCQVDHPDLAE---------------------------RIIGGVNL 69 (327)
T ss_dssp CCHHHHHTT----HHHHHHHHGGGTTCEEEEEESCCCTTCTTTGG---------------------------GEEEEEEC
T ss_pred cCcchhhcC----hHHHHhcCCCCCCCEEEEEcCCCCCCChhHhh---------------------------cccCCccc
Confidence 347776543 36799999999999999999999999999963 35666666
Q ss_pred cccccccCCCCCCCCCCCCCCCCCCCCchhhHHhhccCCCCccCcccccCcceeeecCCCeEEEEEeeccCC-CChHHHH
Q 004261 189 SKGYHMAGGSFSKKPNEPESPRDYDGHGTHTASTAAGVPVANASLLGYASGVARGMATHARVATYKVCWKTG-CFGSDIL 267 (765)
Q Consensus 189 ~~g~~~~~~~~~~~~~~~~~~~d~~gHGThVAgi~Ag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~ 267 (765)
...+.. +.....|..||||||||||+|..+ +. | +.||||+|+|+.+|+++..| +..++++
T Consensus 70 ~~~~~~----------~~~~~~d~~gHGT~VAgiia~~~~-~~---g-----~~GvAp~a~l~~~kv~~~~g~~~~~~i~ 130 (327)
T 2x8j_A 70 TTDYGG----------DETNFSDNNGHGTHVAGTVAAAET-GS---G-----VVGVAPKADLFIIKALSGDGSGEMGWIA 130 (327)
T ss_dssp SSGGGG----------CTTCCCCSSSHHHHHHHHHHCCCC-SS---B-----CCCSSTTCEEEEEECSCTTSEECHHHHH
T ss_pred cCCCCC----------CCCCCCCCCCchHHHHHHHhccCC-CC---C-----cEeeCCCCEEEEEEeECCCCCcCHHHHH
Confidence 654321 112356889999999999999742 11 2 37999999999999998877 7888999
Q ss_pred HHHHHHHh------CCCcEEEeccCCCCCCCcccHHHHHHHHHHhCCcEEEEecCCCCCCC-----CCcccCCCceEEEc
Q 004261 268 AGIDRAIQ------DGVDVLSMSLGGGSAPYYRDTIAVGAFAAMEKGIVVSCSAGNSGPTK-----ASLANVAPWILTVG 336 (765)
Q Consensus 268 ~ai~~a~~------~g~dVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~-----~~~~~~ap~vitVg 336 (765)
+||+||++ ++++|||||||.... .+.+..++.++.++|++||+||||+|... ..+++..+++|+||
T Consensus 131 ~ai~~a~~~~~~~~~~~~Vin~S~G~~~~---~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~~Pa~~~~vi~Vg 207 (327)
T 2x8j_A 131 KAIRYAVDWRGPKGEQMRIITMSLGGPTD---SEELHDAVKYAVSNNVSVVCAAGNEGDGREDTNEFAYPAAYNEVIAVG 207 (327)
T ss_dssp HHHHHHHHCCCTTSCCCSEEEECEEBSCC---CHHHHHHHHHHHHTTCEEEEECCCT---------TCBTTTSTTSEEEE
T ss_pred HHHHHHHhhcccccCCceEEEECCCcCCC---CHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCceeccccCCCEEEEE
Confidence 99999999 899999999998532 35677777889999999999999999752 45677889999999
Q ss_pred cCCCCCceeEEEEeCCceeEEeEeeccCCCCCCeeEEEEEecCCCCCCCCCCCCCCCCCCCcccCeEEEEeCCCcchhhh
Q 004261 337 AGTLDRDFPAYVFLGNKKKATGVSLYSGNGMGNKPVSLVYNKGSNGSSSSNLCLPGSLQPELVRGKVVICDRGINARVEK 416 (765)
Q Consensus 337 Ast~d~~~~~~~~~~~g~~~~~~s~~~~~~~~~~~~~~v~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~ 416 (765)
|++.
T Consensus 208 a~~~---------------------------------------------------------------------------- 211 (327)
T 2x8j_A 208 AVDF---------------------------------------------------------------------------- 211 (327)
T ss_dssp EECT----------------------------------------------------------------------------
T ss_pred EECC----------------------------------------------------------------------------
Confidence 8421
Q ss_pred hHHHhhcCccEEEEeecCCCCccccccCccccEEEEchhhHHHHHHHHhcCCCceEEEEecceEecccCCCeeeeccCCC
Q 004261 417 GAVVRDAGGVGMILANTAASGEELVADSHLLPAVAIGRKMGDIVREYAKTVPNPTALLTFGGTVLNVRPSPVVAAFSSRG 496 (765)
Q Consensus 417 ~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~v~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~G 496 (765)
.+.++.||++|
T Consensus 212 ---------------------------------------------------------------------~~~~~~fS~~G 222 (327)
T 2x8j_A 212 ---------------------------------------------------------------------DLRLSDFTNTN 222 (327)
T ss_dssp ---------------------------------------------------------------------TCCBSCC---C
T ss_pred ---------------------------------------------------------------------CCCCCCccCCC
Confidence 12578999999
Q ss_pred CCCCCCCCcCCceeecCCcEEeeecCCCCCCCcccCccceeeEEeccccchhhhhhhHHHHHHhh-----CCCCCHHHHH
Q 004261 497 PNMVTPQILKPDVIGPGVNILAAWTEASGPTELEKDTRRTKFNIMSGTSMSCPHLSGVAALLKAA-----HPDWSPSAIK 571 (765)
Q Consensus 497 p~~~~~~~lKPDi~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~-----~P~~sp~~ik 571 (765)
|. |||+|||++|+++++.+ .|..++|||||||||||++|||+|+ +|.+++.+||
T Consensus 223 ~~--------~di~APG~~i~s~~~~~-------------~~~~~sGTS~AaP~VaG~aAll~~~~~~~~~p~ls~~~v~ 281 (327)
T 2x8j_A 223 EE--------IDIVAPGVGIKSTYLDS-------------GYAELSGTAMAAPHVAGALALIINLAEDAFKRSLSETEIY 281 (327)
T ss_dssp CC--------CSEEEECSSEEEECSTT-------------CEEEEESGGGTHHHHHHHHHHHHHHHHHHHTSCCCHHHHH
T ss_pred CC--------ceEecCcCceEeecCCC-------------CEEeecCHHHHHHHHHHHHHHHHHhhhhhcCCCCCHHHHH
Confidence 84 59999999999998765 7999999999999999999999999 9999999999
Q ss_pred HHHHhcceeccCCCCCCCCCCCCCCCCCCcCCCcccCccccCC
Q 004261 572 SALMTTAYVVDNTKSPLHDAADGRLSTPWAHGSGHVNPQKAIS 614 (765)
Q Consensus 572 ~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~G~G~vd~~~Al~ 614 (765)
++|++||+++. .++..+|+|+||+.+|++
T Consensus 282 ~~L~~tA~~~g--------------~~~~~~G~G~vd~~~A~~ 310 (327)
T 2x8j_A 282 AQLVRRATPIG--------------FTAQAEGNGFLTLDLVER 310 (327)
T ss_dssp HHHHTTEECCS--------------SCHHHHTTCEECTTHHHH
T ss_pred HHHHHhCccCC--------------CCCCceeeeEECHHHHHH
Confidence 99999999763 234589999999999987
No 16
>4h6x_A Thiazoline oxidase/subtilisin-like protease; hydrolase; 2.00A {Prochloron didemni} PDB: 4aks_A 4akt_A
Probab=100.00 E-value=4.5e-53 Score=460.89 Aligned_cols=301 Identities=19% Similarity=0.226 Sum_probs=197.0
Q ss_pred ccccccCCCCCCcEEEEeccCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCcee----Eeeeecc-ccccccCC
Q 004261 123 YSKLDFDKASLDVIIGVLDTGVWPESKSFDDSAMPEVPTKWRGQCESGPDFSPKLCNKKL----IGARFFS-KGYHMAGG 197 (765)
Q Consensus 123 ~~~~~~~~~G~gV~VaVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~~~~~~~n~ki----ig~~~~~-~g~~~~~~ 197 (765)
.++|..+..|++|+|||||||||++||+|++..+.+....|...++....... ..+..+ ...+.+. ..+...
T Consensus 21 ~~~w~~~~g~~~V~VaViDtGiD~~Hpdf~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-- 97 (357)
T 4h6x_A 21 ADLHNQTLGDPQITIVIIDGDPDYTLSCFEGAEVSKVFPYWHEPAEPITPEDY-AAFQSIRDQGLKGKEKEEALEAVI-- 97 (357)
T ss_dssp HHHHHHCSCCTTSEEEEEESCCCTTSGGGTTCEEEECCCTTSCCCCCCCHHHH-HHHHHHHHHTCCSHHHHHHHHHHC--
T ss_pred HHHHHhcCCCCCCEEEEEcCCCCCCChhHcCCCcccccccccccccccCcccc-cccccccCcccccccccccccccc--
Confidence 45899999999999999999999999999987666666677665442110000 000000 0000000 000000
Q ss_pred CCCCCCCCCCCCCCCCCCchhhHHhhccCCCCccCcccccCcceeeecCCCeEEEEEeeccC-----C-CChHHHHHHHH
Q 004261 198 SFSKKPNEPESPRDYDGHGTHTASTAAGVPVANASLLGYASGVARGMATHARVATYKVCWKT-----G-CFGSDILAGID 271 (765)
Q Consensus 198 ~~~~~~~~~~~~~d~~gHGThVAgi~Ag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~-----g-~~~~~i~~ai~ 271 (765)
.+..++.|.+||||||||||||+..+ .+.||||+|+|+.+|++... + ....++++||+
T Consensus 98 ------~~~~~~~D~~gHGThVAGiiag~~~~----------g~~GvAp~a~l~~~k~~~~~~~~~~~~~~~~~~~~ai~ 161 (357)
T 4h6x_A 98 ------PDTKDRIVLNDHACHVTSTIVGQEHS----------PVFGIAPNCRVINMPQDAVIRGNYDDVMSPLNLARAID 161 (357)
T ss_dssp ------TTTHHHHHHHHHHHHHHHHHHCCTTS----------SCCCSCTTSEEEEEECTTC----------CHHHHHHHH
T ss_pred ------CCCCCCcCCCCcHHHHHHHHhccCCC----------CceEeeccceEEeeeecccCCCCccccccHHHHHHHHH
Confidence 11234567789999999999997532 14799999999999997542 1 44567889999
Q ss_pred HHHhCCCcEEEeccCCCC-CCCcccHHHHHHHHHHhCCcEEEEecCCCCCCCCCcccCCCceEEEccCCCCCceeEEEEe
Q 004261 272 RAIQDGVDVLSMSLGGGS-APYYRDTIAVGAFAAMEKGIVVSCSAGNSGPTKASLANVAPWILTVGAGTLDRDFPAYVFL 350 (765)
Q Consensus 272 ~a~~~g~dVIn~SlG~~~-~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~ap~vitVgAst~d~~~~~~~~~ 350 (765)
||+++|++|||||||... .....+.+..++.++.++|++||+||||+|.....+++..|++|+|||++.
T Consensus 162 ~a~~~g~~Vin~S~G~~~~~~~~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~---------- 231 (357)
T 4h6x_A 162 LALELGANIIHCAFCRPTQTSEGEEILVQAIKKCQDNNVLIVSPTGNNSNESWCLPAVLPGTLAVGAAKV---------- 231 (357)
T ss_dssp HHHHTTCSEEEEC-----------CHHHHHHHHHHHTTCEEEEECC---------------CEEEEEECT----------
T ss_pred HHHHcCCCEEeeccccCCccccchhHHHHHHHHHhhCCeEEEecccCCCCCcCcCcccCCCCceEEEecc----------
Confidence 999999999999999763 233456778888899999999999999999888888899999999998321
Q ss_pred CCceeEEeEeeccCCCCCCeeEEEEEecCCCCCCCCCCCCCCCCCCCcccCeEEEEeCCCcchhhhhHHHhhcCccEEEE
Q 004261 351 GNKKKATGVSLYSGNGMGNKPVSLVYNKGSNGSSSSNLCLPGSLQPELVRGKVVICDRGINARVEKGAVVRDAGGVGMIL 430 (765)
Q Consensus 351 ~~g~~~~~~s~~~~~~~~~~~~~~v~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~i~ 430 (765)
T Consensus 232 -------------------------------------------------------------------------------- 231 (357)
T 4h6x_A 232 -------------------------------------------------------------------------------- 231 (357)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eecCCCCccccccCccccEEEEchhhHHHHHHHHhcCCCceEEEEecceEecccCCCeeeeccCCCCCCCCCCCcCCcee
Q 004261 431 ANTAASGEELVADSHLLPAVAIGRKMGDIVREYAKTVPNPTALLTFGGTVLNVRPSPVVAAFSSRGPNMVTPQILKPDVI 510 (765)
Q Consensus 431 ~n~~~~~~~~~~~~~~~p~~~v~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~lKPDi~ 510 (765)
.+.++.|||||+. ..||||+
T Consensus 232 -------------------------------------------------------~~~~~~fSn~G~~-----~~~~di~ 251 (357)
T 4h6x_A 232 -------------------------------------------------------DGTPCHFSNWGGN-----NTKEGIL 251 (357)
T ss_dssp -------------------------------------------------------TSSBCTTCC---C-----TTTTEEE
T ss_pred -------------------------------------------------------CCcccccccCCCC-----CCcccee
Confidence 1357899999975 3589999
Q ss_pred ecCCcEEeeecCCCCCCCcccCccceeeEEeccccchhhhhhhHHHHHHhh----CCCCCHHHHHHHHHhcceeccCCCC
Q 004261 511 GPGVNILAAWTEASGPTELEKDTRRTKFNIMSGTSMSCPHLSGVAALLKAA----HPDWSPSAIKSALMTTAYVVDNTKS 586 (765)
Q Consensus 511 APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~----~P~~sp~~ik~~L~~TA~~~~~~~~ 586 (765)
|||++|+++++.+. .|..++|||||||||||++|||+++ +|.|+++|||++|++||++++..
T Consensus 252 APG~~i~s~~~~~~------------~~~~~sGTS~AaP~vaG~~All~s~~~~~~~~lt~~~v~~~L~~tA~~~~~~-- 317 (357)
T 4h6x_A 252 APGEEILGAQPCTE------------EPVRLTGTSMAAPVMTGISALLMSLQVQQGKPVDAEAVRTALLKTAIPCDPE-- 317 (357)
T ss_dssp EECSSEEECCTTCS------------CCEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHC---------
T ss_pred ecCCCeEeccCCCC------------cccccCcHHHHHHHHHHHHHHHHHhhHhhCCCCCHHHHHHHHHhhCccCCCC--
Confidence 99999999987642 5778999999999999999999964 66899999999999999987532
Q ss_pred CCCCCCCCCCCCCCcCCCcccCccccCC
Q 004261 587 PLHDAADGRLSTPWAHGSGHVNPQKAIS 614 (765)
Q Consensus 587 ~~~~~~~~~~~~~~~~G~G~vd~~~Al~ 614 (765)
....+.+||+|+||+.+|++
T Consensus 318 --------~~~~~~~~G~G~vn~~~A~~ 337 (357)
T 4h6x_A 318 --------VVEEPERCLRGFVNIPGAMK 337 (357)
T ss_dssp ---------------CTTCBCCHHHHHH
T ss_pred --------CCCCcccceeEEecHHHHHH
Confidence 22344689999999999987
No 17
>2ixt_A 36KDA protease; serine protease, sphericase, subtilisin like protease, hydrolase; 0.8A {Bacillus sphaericus} SCOP: c.41.1.1 PDB: 3d43_A 1ea7_A* 2gko_A*
Probab=100.00 E-value=3.5e-50 Score=430.84 Aligned_cols=290 Identities=29% Similarity=0.391 Sum_probs=228.6
Q ss_pred cccccccCCCCCCCccccccCCCCCCcEEEEeccCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCceeEeeeec
Q 004261 109 QFLGISSDFGLSAGYSKLDFDKASLDVIIGVLDTGVWPESKSFDDSAMPEVPTKWRGQCESGPDFSPKLCNKKLIGARFF 188 (765)
Q Consensus 109 ~~~g~~~~~~~~~~~~~~~~~~~G~gV~VaVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~~~~~~~n~kiig~~~~ 188 (765)
..|+++.+.. +++|..+.+|+||+|||||||||++||+|.+ ++...++|
T Consensus 6 ~~W~l~~i~~----~~~w~~~~~G~gv~VaViDtGvd~~H~~l~~---------------------------~~~~~~~~ 54 (310)
T 2ixt_A 6 IPWGIKAIYN----NDTLTSTTGGSGINIAVLDTGVNTSHPDLVN---------------------------NVEQCKDF 54 (310)
T ss_dssp SCHHHHHHHT----CTTCCCCCCCTTCEEEEEESCCCTTCTTTTT---------------------------TEEEEEES
T ss_pred CCCchhhcCc----hhhhhccCCCCCcEEEEEecCCCCCCHHHhh---------------------------cccccccc
Confidence 3466665443 6799999999999999999999999999974 24455555
Q ss_pred cccccccCCCCCCCCCCCCCCCCCCCCchhhHHhhccCCCCccCcccccCcceeeecCCCeEEEEEeeccCC-CChHHHH
Q 004261 189 SKGYHMAGGSFSKKPNEPESPRDYDGHGTHTASTAAGVPVANASLLGYASGVARGMATHARVATYKVCWKTG-CFGSDIL 267 (765)
Q Consensus 189 ~~g~~~~~~~~~~~~~~~~~~~d~~gHGThVAgi~Ag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~ 267 (765)
..... .......|..||||||||||+|....+. .| +.||||+|+|+.+|++++.+ +..++++
T Consensus 55 ~~~~~----------~~~~~~~d~~gHGT~vAgiia~~~~~n~--~g-----~~GvAp~a~l~~~~v~~~~g~~~~~~~~ 117 (310)
T 2ixt_A 55 TGATT----------PINNSCTDRNGHGTHVAGTALADGGSDQ--AG-----IYGVAPDADLWAYKVLLDSGSGYSDDIA 117 (310)
T ss_dssp SSSSS----------CEETCCCCSSSHHHHHHHHHHCBCCTTS--CS-----CBCSCTTSEEEEEECSCTTSCCCHHHHH
T ss_pred cCCCC----------CCCCCCCCCCCCHHHHHHHHhccCCCCC--Cc-----eEEECCCCEEEEEEEEcCCCCCcHHHHH
Confidence 54210 0112346789999999999999853221 11 48999999999999998877 6888999
Q ss_pred HHHHHHHhCCC-----cEEEeccCCCCCCCcccHHHHHHHHHHhCCcEEEEecCCCCCC--CCCcccCCCceEEEccCCC
Q 004261 268 AGIDRAIQDGV-----DVLSMSLGGGSAPYYRDTIAVGAFAAMEKGIVVSCSAGNSGPT--KASLANVAPWILTVGAGTL 340 (765)
Q Consensus 268 ~ai~~a~~~g~-----dVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~--~~~~~~~ap~vitVgAst~ 340 (765)
+||+|++++++ +|||||||.... ...+..++.++.++|++||+||||+|.. ...+++..|++|+|||.+.
T Consensus 118 ~ai~~a~~~~~~~~~~~Vin~S~G~~~~---~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~~~Pa~~~~vi~Vga~~~ 194 (310)
T 2ixt_A 118 AAIRHAADQATATGTKTIISMSLGSSAN---NSLISSAVNYAYSKGVLIVAAAGNSGYSQGTIGYPGALPNAIAVAALEN 194 (310)
T ss_dssp HHHHHHHHHHHHHTCCEEEEECCCBSSC---CHHHHHHHHHHHHTTCEEEEECCSCCSSTTCCCBTTTSTTSEEEEEEEE
T ss_pred HHHHHHHHhhhccCCCeEEEEcCCCCCC---CHHHHHHHHHHHhCCcEEEEcCCCCCCCCCCCCCcccCCCeeEEEeccc
Confidence 99999999988 999999998632 3567777788999999999999999976 3456788899999998321
Q ss_pred CCceeEEEEeCCceeEEeEeeccCCCCCCeeEEEEEecCCCCCCCCCCCCCCCCCCCcccCeEEEEeCCCcchhhhhHHH
Q 004261 341 DRDFPAYVFLGNKKKATGVSLYSGNGMGNKPVSLVYNKGSNGSSSSNLCLPGSLQPELVRGKVVICDRGINARVEKGAVV 420 (765)
Q Consensus 341 d~~~~~~~~~~~g~~~~~~s~~~~~~~~~~~~~~v~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~ 420 (765)
..
T Consensus 195 ~~------------------------------------------------------------------------------ 196 (310)
T 2ixt_A 195 VQ------------------------------------------------------------------------------ 196 (310)
T ss_dssp EE------------------------------------------------------------------------------
T ss_pred cc------------------------------------------------------------------------------
Confidence 00
Q ss_pred hhcCccEEEEeecCCCCccccccCccccEEEEchhhHHHHHHHHhcCCCceEEEEecceEecccCCC--eeeeccCCCCC
Q 004261 421 RDAGGVGMILANTAASGEELVADSHLLPAVAIGRKMGDIVREYAKTVPNPTALLTFGGTVLNVRPSP--VVAAFSSRGPN 498 (765)
Q Consensus 421 ~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~v~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~--~~a~fSS~Gp~ 498 (765)
..+ .++.||++||.
T Consensus 197 ----------------------------------------------------------------~~g~~~~~~~S~~G~~ 212 (310)
T 2ixt_A 197 ----------------------------------------------------------------QNGTYRVADYSSRGYI 212 (310)
T ss_dssp ----------------------------------------------------------------ETTEEEECTTSCCCCT
T ss_pred ----------------------------------------------------------------cCCCeeeccccCCCCc
Confidence 001 57889999995
Q ss_pred CCC----CCCcCCceeecCCcEEeeecCCCCCCCcccCccceeeEEeccccchhhhhhhHHHHHHhhCCCCCHHHHHHHH
Q 004261 499 MVT----PQILKPDVIGPGVNILAAWTEASGPTELEKDTRRTKFNIMSGTSMSCPHLSGVAALLKAAHPDWSPSAIKSAL 574 (765)
Q Consensus 499 ~~~----~~~lKPDi~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~sp~~ik~~L 574 (765)
... ..+.||||+|||++|+++++.+ .|..++|||||||||||++|||+|++|+|++.+||++|
T Consensus 213 ~~~g~~~~~~~~~di~ApG~~i~s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L 279 (310)
T 2ixt_A 213 STAGDYVIQEGDIEISAPGSSVYSTWYNG-------------GYNTISGTSMATPHVSGLAAKIWAENPSLSNTQLRSNL 279 (310)
T ss_dssp TTTTSSSCCTTCCCEEEECSSEEEECTTS-------------SEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHH
T ss_pred cCCccccccCCCeeEECCCCCEeeecCCC-------------CEEeeccHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHH
Confidence 321 1235999999999999998764 79999999999999999999999999999999999999
Q ss_pred HhcceeccCCCCCCCCCCCCCCCCCCcCCCcccCc
Q 004261 575 MTTAYVVDNTKSPLHDAADGRLSTPWAHGSGHVNP 609 (765)
Q Consensus 575 ~~TA~~~~~~~~~~~~~~~~~~~~~~~~G~G~vd~ 609 (765)
++||++++..+. ....+..++.+|||++|+
T Consensus 280 ~~tA~~~~~~~~-----~~a~~g~d~~~G~G~~~v 309 (310)
T 2ixt_A 280 QERAKSVDIKGG-----YGAAIGDDYASGFGFARV 309 (310)
T ss_dssp HHHHHTSCCCBS-----TTCCSSSBTTTBTCBCCC
T ss_pred HhhCcccCCCCC-----cccccCCccccccceeec
Confidence 999998764321 112456778999999986
No 18
>3zxy_A Subtilisin-like protein; hydrolase; 1.58A {Prochloron didemni} PDB: 3zxx_A
Probab=100.00 E-value=3.7e-51 Score=432.35 Aligned_cols=264 Identities=22% Similarity=0.274 Sum_probs=210.0
Q ss_pred CCCC-CCcEEEEeccCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCceeEeeeeccccccccCCCCCCCCCCCC
Q 004261 129 DKAS-LDVIIGVLDTGVWPESKSFDDSAMPEVPTKWRGQCESGPDFSPKLCNKKLIGARFFSKGYHMAGGSFSKKPNEPE 207 (765)
Q Consensus 129 ~~~G-~gV~VaVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~~~~~~~n~kiig~~~~~~g~~~~~~~~~~~~~~~~ 207 (765)
.++| +||+|||||||||++||+|.+. ++..+++... ....
T Consensus 3 ~l~G~~gV~VaViDtGid~~Hpdl~g~---------------------------~~~~~~~~~~------------~~~~ 43 (282)
T 3zxy_A 3 SLKGDHNIRVAILDGPVDIAHPCFQGA---------------------------DLTVLPTLAP------------TAAR 43 (282)
T ss_dssp TCCCCTTSEEEEEESCCCTTSGGGTTC---------------------------EEEECCCSSC------------CCCC
T ss_pred CCcCCCCCEEEEEcCCCCCCChhHCCC---------------------------eeecCcCCCC------------CCCC
Confidence 3567 7999999999999999999743 1111222110 1112
Q ss_pred CCCCCCCCchhhHHhhccCCCCccCcccccCcceeeecCCCeEEEEEeeccCC--CChHHHHHHHHHHHhCCCcEEEecc
Q 004261 208 SPRDYDGHGTHTASTAAGVPVANASLLGYASGVARGMATHARVATYKVCWKTG--CFGSDILAGIDRAIQDGVDVLSMSL 285 (765)
Q Consensus 208 ~~~d~~gHGThVAgi~Ag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g--~~~~~i~~ai~~a~~~g~dVIn~Sl 285 (765)
...|.+||||||||||+|+..++ +.||||+|+|+.+|++.+.+ ....++++||+||++++++||||||
T Consensus 44 ~d~~~~gHGT~VAGiiag~~~~~----------~~GvAp~a~l~~~kv~~~~~~~~~~~~i~~ai~~a~~~~~~Vin~S~ 113 (282)
T 3zxy_A 44 SDGFMSAHGTHVASIIFGQPETS----------VPGIAPQCRGLIVPIFSDDRRRITQLDLARGIERAVNAGAHIINISG 113 (282)
T ss_dssp TTCHHHHHHHHHHHHHHCCTTSS----------SCCSSTTSEEEEEECSCSSSSCCCHHHHHHHHHHHHHTTCSEEEECC
T ss_pred CCCCCCCcccceeehhhccCCce----------eeeeccccceEeeEeeccccccchHHHHHHHHHHhhccCCeEEeccC
Confidence 23456799999999999975321 47999999999999986553 6777899999999999999999999
Q ss_pred CCCC-CCCcccHHHHHHHHHHhCCcEEEEecCCCCCCCCCcccCCCceEEEccCCCCCceeEEEEeCCceeEEeEeeccC
Q 004261 286 GGGS-APYYRDTIAVGAFAAMEKGIVVSCSAGNSGPTKASLANVAPWILTVGAGTLDRDFPAYVFLGNKKKATGVSLYSG 364 (765)
Q Consensus 286 G~~~-~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~ap~vitVgAst~d~~~~~~~~~~~g~~~~~~s~~~~ 364 (765)
|... .......+..++.++.++|+++|+||||+|......++..|++|+|||.+.
T Consensus 114 G~~~~~~~~~~~~~~ai~~a~~~gi~vV~AaGN~g~~~~~~Pa~~~~vi~Vga~~~------------------------ 169 (282)
T 3zxy_A 114 GELTDFGEADGWLENAVSLCRQNNVLLVAAAGNNGCDCLHVPAALPAVLAVGAMDD------------------------ 169 (282)
T ss_dssp CEEESSSCCCHHHHHHHHHHHHTTCEEEEECCSSCSSCEEETTTSTTCEEEEEECT------------------------
T ss_pred ccccccccccHHHHHHHHHHhhcCceEEEecccCCCccccCccccceeEEEEEEcC------------------------
Confidence 9753 223345677778889999999999999999888888889999999998321
Q ss_pred CCCCCeeEEEEEecCCCCCCCCCCCCCCCCCCCcccCeEEEEeCCCcchhhhhHHHhhcCccEEEEeecCCCCccccccC
Q 004261 365 NGMGNKPVSLVYNKGSNGSSSSNLCLPGSLQPELVRGKVVICDRGINARVEKGAVVRDAGGVGMILANTAASGEELVADS 444 (765)
Q Consensus 365 ~~~~~~~~~~v~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~ 444 (765)
T Consensus 170 -------------------------------------------------------------------------------- 169 (282)
T 3zxy_A 170 -------------------------------------------------------------------------------- 169 (282)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccEEEEchhhHHHHHHHHhcCCCceEEEEecceEecccCCCeeeeccCCCCCCCCCCCcCCceeecCCcEEeeecCCC
Q 004261 445 HLLPAVAIGRKMGDIVREYAKTVPNPTALLTFGGTVLNVRPSPVVAAFSSRGPNMVTPQILKPDVIGPGVNILAAWTEAS 524 (765)
Q Consensus 445 ~~~p~~~v~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~lKPDi~APG~~I~sa~~~~~ 524 (765)
.+.++.||+||+. ..||||+|||++|+++++.+
T Consensus 170 -----------------------------------------~~~~~~~S~~~~~-----~~~~di~ApG~~i~s~~~~~- 202 (282)
T 3zxy_A 170 -----------------------------------------HGHPLDFSNWGST-----YEQQGILAPGEDILGAKPGG- 202 (282)
T ss_dssp -----------------------------------------TSCBCSSSCCCHH-----HHHHEEEEECSSEEEECTTS-
T ss_pred -----------------------------------------CCccccccCCCCC-----ccccceeccCcceeeecCCC-
Confidence 1256789999874 45889999999999998875
Q ss_pred CCCCcccCccceeeEEeccccchhhhhhhHHHHHHhhC----CCCCHHHHHHHHHhcceeccCCCCCCCCCCCCCCCCCC
Q 004261 525 GPTELEKDTRRTKFNIMSGTSMSCPHLSGVAALLKAAH----PDWSPSAIKSALMTTAYVVDNTKSPLHDAADGRLSTPW 600 (765)
Q Consensus 525 ~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~----P~~sp~~ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~ 600 (765)
.|..++|||||||||||++|||++++ |.++|+|||++|++||++++. ..+....
T Consensus 203 ------------~~~~~sGTS~AaP~vaG~aAll~~~~~~~~~~~~~~~vk~~L~~tA~~~~~----------~~~~~~~ 260 (282)
T 3zxy_A 203 ------------GTERLSGTAFATPIVSGVAALLLSEQVRRGETPDPQKVRQLLLQSALPCDD----------DAPEQAR 260 (282)
T ss_dssp ------------CEEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHCBCC-----------------CG
T ss_pred ------------ceeecCCCcccchHHHHHHHHHHHHhHhhCCCCCHHHHHHHHHhhCeeCCC----------CCCCccC
Confidence 79999999999999999999999874 789999999999999987643 1233456
Q ss_pred cCCCcccCccccCC
Q 004261 601 AHGSGHVNPQKAIS 614 (765)
Q Consensus 601 ~~G~G~vd~~~Al~ 614 (765)
.+|+|+||+.+|++
T Consensus 261 ~~G~G~ln~~~A~~ 274 (282)
T 3zxy_A 261 RCLAGRLNVSGAFT 274 (282)
T ss_dssp GGTTCBCCHHHHHH
T ss_pred ceeeeEeCHHHHHH
Confidence 89999999999986
No 19
>2z30_A TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 3a3o_A 3a3n_A 2zrq_A 2z57_A 2z56_A 2z58_A 3a3p_A 2z2x_A* 2z2y_A
Probab=100.00 E-value=1.2e-50 Score=435.61 Aligned_cols=273 Identities=30% Similarity=0.395 Sum_probs=223.8
Q ss_pred cccccccCCCCCCCccccccCCCCC--CcEEEEeccCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCceeEeee
Q 004261 109 QFLGISSDFGLSAGYSKLDFDKASL--DVIIGVLDTGVWPESKSFDDSAMPEVPTKWRGQCESGPDFSPKLCNKKLIGAR 186 (765)
Q Consensus 109 ~~~g~~~~~~~~~~~~~~~~~~~G~--gV~VaVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~~~~~~~n~kiig~~ 186 (765)
..|+++.+.. +.+|..+ +|+ ||+|||||||||++||+|.+ ++...+
T Consensus 8 ~~W~l~~i~~----~~aw~~~-~G~~~gv~VaViDtGid~~Hp~l~~---------------------------~~~~~~ 55 (320)
T 2z30_A 8 IPWGIERVKA----PSVWSIT-DGSVSVIQVAVLDTGVDYDHPDLAA---------------------------NIAWCV 55 (320)
T ss_dssp CCHHHHHTTC----GGGTTTC-CSCCTTCEEEEEESCBCTTCTTTGG---------------------------GEEEEE
T ss_pred CCCChhhcCh----HHHHHhc-CCCcCCeEEEEECCCCCCCChhHhc---------------------------ccccCc
Confidence 3477765543 7799988 899 99999999999999999963 344455
Q ss_pred eccccccccCCCCCCCCCCCCCCCCCCCCchhhHHhhccCCCCccCcccccCcceeeecCCCeEEEEEeeccCC-CChHH
Q 004261 187 FFSKGYHMAGGSFSKKPNEPESPRDYDGHGTHTASTAAGVPVANASLLGYASGVARGMATHARVATYKVCWKTG-CFGSD 265 (765)
Q Consensus 187 ~~~~g~~~~~~~~~~~~~~~~~~~d~~gHGThVAgi~Ag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~ 265 (765)
+|..+... .......|..||||||||||+|.. ++ .| +.||||+|+|+.+|+++..| +..++
T Consensus 56 ~~~~~~~~---------~~~~~~~d~~gHGT~vAgiia~~~-n~---~g-----~~GvAp~a~l~~~~v~~~~g~~~~~~ 117 (320)
T 2z30_A 56 STLRGKVS---------TKLRDCADQNGHGTHVIGTIAALN-ND---IG-----VVGVAPGVQIYSVRVLDARGSGSYSD 117 (320)
T ss_dssp ECGGGCCB---------CCHHHHBCSSSHHHHHHHHHHCCS-SS---BS-----CCCSSTTCEEEEEECSCTTSEEEHHH
T ss_pred cccCCccC---------CCCCCCCCCCCCHHHHHHHHHccc-CC---Cc-----eEeeCCCCEEEEEEeeCCCCCccHHH
Confidence 55442110 001123678999999999999973 21 12 37999999999999998877 78889
Q ss_pred HHHHHHHHHhC--------------------CCcEEEeccCCCCCCCcccHHHHHHHHHHhCCcEEEEecCCCCCCCCCc
Q 004261 266 ILAGIDRAIQD--------------------GVDVLSMSLGGGSAPYYRDTIAVGAFAAMEKGIVVSCSAGNSGPTKASL 325 (765)
Q Consensus 266 i~~ai~~a~~~--------------------g~dVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~ 325 (765)
+++||+||+++ +++|||||||.... ...+..++.++.++|++||+||||+|.....+
T Consensus 118 i~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~Vin~S~G~~~~---~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~ 194 (320)
T 2z30_A 118 IAIGIEQAILGPDGVADKDGDGIIAGDPDDDAAEVISMSLGGPAD---DSYLYDMIIQAYNAGIVIVAASGNEGAPSPSY 194 (320)
T ss_dssp HHHHHHHHHHTTTTCSCTTSSSCCTTCTTSCCCSEEEECEEBSCC---CHHHHHHHHHHHHTTCEEEEECCSSCCSSCCB
T ss_pred HHHHHHHHHhCcccccccccccccccccccCCceEEEecCCCCCC---CHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCC
Confidence 99999999987 99999999998642 34567777788999999999999999888888
Q ss_pred ccCCCceEEEccCCCCCceeEEEEeCCceeEEeEeeccCCCCCCeeEEEEEecCCCCCCCCCCCCCCCCCCCcccCeEEE
Q 004261 326 ANVAPWILTVGAGTLDRDFPAYVFLGNKKKATGVSLYSGNGMGNKPVSLVYNKGSNGSSSSNLCLPGSLQPELVRGKVVI 405 (765)
Q Consensus 326 ~~~ap~vitVgAst~d~~~~~~~~~~~g~~~~~~s~~~~~~~~~~~~~~v~~~~~~~~~~~~~c~~~~~~~~~~~gkivl 405 (765)
++..|++|+|||.+.
T Consensus 195 Pa~~~~vi~Vga~~~----------------------------------------------------------------- 209 (320)
T 2z30_A 195 PAAYPEVIAVGAIDS----------------------------------------------------------------- 209 (320)
T ss_dssp TTTSTTEEEEEEECT-----------------------------------------------------------------
T ss_pred cccCCCeEEEEeeCC-----------------------------------------------------------------
Confidence 899999999998321
Q ss_pred EeCCCcchhhhhHHHhhcCccEEEEeecCCCCccccccCccccEEEEchhhHHHHHHHHhcCCCceEEEEecceEecccC
Q 004261 406 CDRGINARVEKGAVVRDAGGVGMILANTAASGEELVADSHLLPAVAIGRKMGDIVREYAKTVPNPTALLTFGGTVLNVRP 485 (765)
Q Consensus 406 ~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~v~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~ 485 (765)
T Consensus 210 -------------------------------------------------------------------------------- 209 (320)
T 2z30_A 210 -------------------------------------------------------------------------------- 209 (320)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCeeeeccCCCCCCCCCCCcCCceeecCCcEEeeecCCCCCCCcccCccceeeEEeccccchhhhhhhHHHHHHhhC---
Q 004261 486 SPVVAAFSSRGPNMVTPQILKPDVIGPGVNILAAWTEASGPTELEKDTRRTKFNIMSGTSMSCPHLSGVAALLKAAH--- 562 (765)
Q Consensus 486 ~~~~a~fSS~Gp~~~~~~~lKPDi~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~--- 562 (765)
.+.++.||++|| +|+|||++|+++++.+ .|..++|||||||||||++|||+|++
T Consensus 210 ~~~~~~~S~~g~----------~v~APG~~i~s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~~~~~~ 266 (320)
T 2z30_A 210 NDNIASFSNRQP----------EVSAPGVDILSTYPDD-------------SYETLMGTAMATPHVSGVVALIQAAYYQK 266 (320)
T ss_dssp TSCBCTTSCSSC----------SEEEECSSEEEEETTT-------------EEEEECSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcCcccCCCC----------CEEeCCCCeEEeccCC-------------CeEeccCHHHHHHHHHHHHHHHHHhchhh
Confidence 125788999997 7899999999998865 89999999999999999999999999
Q ss_pred ----------CCCCHHHHHHHHHhcceeccCCCCCCCCCCCCCCCCCCcCCCcccCccccCC
Q 004261 563 ----------PDWSPSAIKSALMTTAYVVDNTKSPLHDAADGRLSTPWAHGSGHVNPQKAIS 614 (765)
Q Consensus 563 ----------P~~sp~~ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~G~G~vd~~~Al~ 614 (765)
|+|++.+||++|++||+++.. +..+..||||+||+.+|++
T Consensus 267 ~~~~~~~~~~p~lt~~~v~~~L~~ta~~~~~------------~g~~~~~G~G~vd~~~A~~ 316 (320)
T 2z30_A 267 YGKILPVGTFDDISKNTVRGILHITADDLGP------------TGWDADYGYGVVRAALAVQ 316 (320)
T ss_dssp HSSCCCCCCTTCCSTTSHHHHHHHHSBCCSS------------SSSBTTTBTCBCCHHHHHH
T ss_pred cccccccccCCCCCHHHHHHHHHhhCccCCC------------CCCCCCcCCceeCHHHHHH
Confidence 999999999999999997632 2234589999999999986
No 20
>2iy9_A SUBA; toxin, shiga, plasmid; 1.8A {Escherichia coli}
Probab=100.00 E-value=2.4e-50 Score=438.84 Aligned_cols=280 Identities=20% Similarity=0.141 Sum_probs=223.7
Q ss_pred cccccccCCCCCCCccccccCCCCC--CcEEEEeccCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCceeEeee
Q 004261 109 QFLGISSDFGLSAGYSKLDFDKASL--DVIIGVLDTGVWPESKSFDDSAMPEVPTKWRGQCESGPDFSPKLCNKKLIGAR 186 (765)
Q Consensus 109 ~~~g~~~~~~~~~~~~~~~~~~~G~--gV~VaVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~~~~~~~n~kiig~~ 186 (765)
..|++..+. ...+|.. .+|+ ||+||||||||| +||+|.+ +++..+
T Consensus 23 ~~W~l~~i~----~~~aw~~-~~G~~~gv~VaViDsGid-~Hp~l~~---------------------------~~~~~~ 69 (347)
T 2iy9_A 23 KPWYFDAIG----LTETTMS-LTDKNTPVVVSVVDSGVA-FIGGLSD---------------------------SEFAKF 69 (347)
T ss_dssp CCHHHHHHT----CCHHHHH-TSCTTSCCEEEEEESCCC-CCGGGTT---------------------------CEEEEE
T ss_pred cCcchhhCC----hHHHHHH-hcCCCCCCEEEEEcCCCc-CChhhhc---------------------------CcccCC
Confidence 346666543 3678988 8899 999999999999 9999964 345555
Q ss_pred eccccccccCCCCCCCCCCCCCCCCCCCCchhhHHhhccCCCCccCcccccCcceeeecCCCeEEEEEeeccCCCChHHH
Q 004261 187 FFSKGYHMAGGSFSKKPNEPESPRDYDGHGTHTASTAAGVPVANASLLGYASGVARGMATHARVATYKVCWKTGCFGSDI 266 (765)
Q Consensus 187 ~~~~g~~~~~~~~~~~~~~~~~~~d~~gHGThVAgi~Ag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g~~~~~i 266 (765)
+|...-. +.+...+.|..||||||||||+|+ .| +.||||+|+|+.+|++++.+.. ++
T Consensus 70 ~~~~~~~---------~~~~~~~~d~~gHGT~vAgiia~~-------~g-----~~GvAp~a~l~~~~v~~~~~~~--~~ 126 (347)
T 2iy9_A 70 SFTQDGS---------PFPVKKSEALYIHGTAMASLIASR-------YG-----IYGVYPHALISSRRVIPDGVQD--SW 126 (347)
T ss_dssp ECBTTCC---------SSCCSSSHHHHHHHHHHHHHHHCS-------SS-----SCCSSTTCEEEEEECCSSBCTT--HH
T ss_pred cccCCCC---------CCCCCCCCCCCCcHHHHHHHHhcc-------cC-----CcccCCCCEEEEEEEecCCCHH--HH
Confidence 5554210 011234577899999999999997 12 2799999999999999775533 99
Q ss_pred HHHHHHHHhC------CCcEEEeccCCCCCCCcccHHHHHHHHHHhCCcEEEEecCCCCCC-------CCCcccCCC---
Q 004261 267 LAGIDRAIQD------GVDVLSMSLGGGSAPYYRDTIAVGAFAAMEKGIVVSCSAGNSGPT-------KASLANVAP--- 330 (765)
Q Consensus 267 ~~ai~~a~~~------g~dVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~-------~~~~~~~ap--- 330 (765)
++||+||+++ +++|||||||........+.+..++.++.++|++||+||||+|.. ...+++..+
T Consensus 127 ~~ai~~a~~~~~~~~~~~~Vin~S~G~~~~~~~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~~~~~~~~Pa~~~~~~ 206 (347)
T 2iy9_A 127 IRAIESIMSNVFLAPGEEKIINISGGQKGVASASVWTELLSRMGRNNDRLIVAAVGNDGADIRKLSAQQRIWPAAYHPVS 206 (347)
T ss_dssp HHHHHHHHTCTTSCTTEEEEEEESSCBCCC-CCHHHHHHHHHHHHHTSCEEEEECCBSCCBTTTSCTTTSCBTTTCCCCS
T ss_pred HHHHHHHHhhhhcccCCceEEEeccccCCCCCcCHHHHHHHHHHHhCCeEEEEeCCCCCCCCCCcccccccCCCcCcccc
Confidence 9999999999 999999999976444456778888889999999999999999975 346777888
Q ss_pred -------ceEEEccCCC--CCceeEEEEeCCceeEEeEeeccCCCCCCeeEEEEEecCCCCCCCCCCCCCCCCCCCcccC
Q 004261 331 -------WILTVGAGTL--DRDFPAYVFLGNKKKATGVSLYSGNGMGNKPVSLVYNKGSNGSSSSNLCLPGSLQPELVRG 401 (765)
Q Consensus 331 -------~vitVgAst~--d~~~~~~~~~~~g~~~~~~s~~~~~~~~~~~~~~v~~~~~~~~~~~~~c~~~~~~~~~~~g 401 (765)
++|+|||.+. +....
T Consensus 207 ~~~~~~~~vi~Vga~~~~~~g~~~-------------------------------------------------------- 230 (347)
T 2iy9_A 207 SVNKKQDPVIRVAALAQYRKGETP-------------------------------------------------------- 230 (347)
T ss_dssp HHHHHTCCEEEEEEECCCCTTSCC--------------------------------------------------------
T ss_pred ccccccCCEEEEEEcccCCCCcee--------------------------------------------------------
Confidence 9999998543 11000
Q ss_pred eEEEEeCCCcchhhhhHHHhhcCccEEEEeecCCCCccccccCccccEEEEchhhHHHHHHHHhcCCCceEEEEecceEe
Q 004261 402 KVVICDRGINARVEKGAVVRDAGGVGMILANTAASGEELVADSHLLPAVAIGRKMGDIVREYAKTVPNPTALLTFGGTVL 481 (765)
Q Consensus 402 kivl~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~v~~~~~~~l~~~~~~~~~~~~~i~~~~~~~ 481 (765)
T Consensus 231 -------------------------------------------------------------------------------- 230 (347)
T 2iy9_A 231 -------------------------------------------------------------------------------- 230 (347)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccCCCeeeeccCCCCCCCCCCCcCCceeecCCcEEeeecCCCCCCCcccCccceeeEEeccccchhhhhhhHHHHHHhh
Q 004261 482 NVRPSPVVAAFSSRGPNMVTPQILKPDVIGPGVNILAAWTEASGPTELEKDTRRTKFNIMSGTSMSCPHLSGVAALLKAA 561 (765)
Q Consensus 482 ~~~~~~~~a~fSS~Gp~~~~~~~lKPDi~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~ 561 (765)
...+.++.||++||+ ||||+|||++|+++++.+ .|..++|||||||||||++|||+|+
T Consensus 231 --~~~~~~~~fS~~G~~-------~~di~APG~~i~s~~~~~-------------~~~~~sGTS~AaP~VaG~aAll~~~ 288 (347)
T 2iy9_A 231 --VLHGGGITGSRFGNN-------WVDIAAPGQNITFLRPDA-------------KTGTGSGTSEATAIVSGVLAAMTSC 288 (347)
T ss_dssp --CBCCCSSSCBCBCTT-------TCSEEEECSSEEEECTTS-------------CEEEECSHHHHHHHHHHHHHHHHHH
T ss_pred --cccCCCCCCCCCCCC-------CCEEEeCCCCeEeecCCC-------------CeEeccchHHHHHHHHHHHHHHHHh
Confidence 000245799999995 679999999999998865 7999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcceeccCCCCCCCCCCCCCCCCCCcCCCcccCccccCCC
Q 004261 562 HPDWSPSAIKSALMTTAYVVDNTKSPLHDAADGRLSTPWAHGSGHVNPQKAISP 615 (765)
Q Consensus 562 ~P~~sp~~ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~G~G~vd~~~Al~~ 615 (765)
+|+|++.|||++|++||+++... ....+|+|+||+.+|++.
T Consensus 289 ~p~lt~~~v~~~L~~tA~~~~~~-------------~~~~~G~G~ld~~~A~~~ 329 (347)
T 2iy9_A 289 NPRATATELKRTLLESADKYPSL-------------VDKVTEGRVLNAEKAISM 329 (347)
T ss_dssp CTTSCHHHHHHHHHHHSEECGGG-------------TTTSGGGEECCHHHHHHH
T ss_pred CCCCCHHHHHHHHHHhCccCCCC-------------CCccccCCEecHHHHHHH
Confidence 99999999999999999987532 125899999999999983
No 21
>4h6w_A N-terminal cyanobactin protease; hydrolase; 2.45A {Planktothrix agardhii nies-596}
Probab=100.00 E-value=2.5e-50 Score=431.53 Aligned_cols=270 Identities=24% Similarity=0.270 Sum_probs=216.5
Q ss_pred ccccccCCCCCCcEEEEeccCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCceeEeeeeccccccccCCCCCCC
Q 004261 123 YSKLDFDKASLDVIIGVLDTGVWPESKSFDDSAMPEVPTKWRGQCESGPDFSPKLCNKKLIGARFFSKGYHMAGGSFSKK 202 (765)
Q Consensus 123 ~~~~~~~~~G~gV~VaVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~~~~~~~n~kiig~~~~~~g~~~~~~~~~~~ 202 (765)
+++|+....++||+|||||||||++||+|.+. .+.+..+|..+
T Consensus 11 ~~aW~~~~G~~gV~VaViDtGid~~Hpdl~g~--------------------------~~~~~~~~~~~----------- 53 (306)
T 4h6w_A 11 KKLWSETRGDPKICVAVLDGIVDQNHPCFIGA--------------------------DLTRLPSLVSG----------- 53 (306)
T ss_dssp HHHHHHCSCCTTCEEEEESSCCCTTSGGGTTC--------------------------EEEECC----------------
T ss_pred HHHHhhhCCCCCCEEEEEcCCCCCCChhHcCC--------------------------cccCCCcccCC-----------
Confidence 45899988779999999999999999999753 22222223221
Q ss_pred CCCCCCCCCCCCCchhhHHhhccCCCCccCcccccCcceeeecCCCeEEEEEeeccCC--CChHHHHHHHHHHHhCCCcE
Q 004261 203 PNEPESPRDYDGHGTHTASTAAGVPVANASLLGYASGVARGMATHARVATYKVCWKTG--CFGSDILAGIDRAIQDGVDV 280 (765)
Q Consensus 203 ~~~~~~~~d~~gHGThVAgi~Ag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g--~~~~~i~~ai~~a~~~g~dV 280 (765)
+.....|.+||||||||||||+..+ .+.||||+|+|+.+|++.+.+ +...++++||+||++++++|
T Consensus 54 --~~~~~~d~~gHGThVAGiiag~~~~----------~~~GVAp~a~l~~~kv~~~~~~~~~~~~i~~ai~~a~~~g~~v 121 (306)
T 4h6w_A 54 --EANANGSMSTHGTHVASIIFGQHDS----------PVTGIAPQCRGLIVPVFADESLKLSQLDLSRAIEQAVNNGANI 121 (306)
T ss_dssp -------CCCCHHHHHHHHHHHCCTTS----------SSCCSSTTSEEEECCCCCSSSCCCCHHHHHHHHHHHHHTTCSE
T ss_pred --CCCCCCCCCCchHHHHHHHHccccC----------CcceeccccccceeeccccccccchHHHHHHHHHHhhccccee
Confidence 1123356789999999999997532 247999999999999987653 67788999999999999999
Q ss_pred EEeccCCCC-CCCcccHHHHHHHHHHhCCcEEEEecCCCCCCCCCcccCCCceEEEccCCCCCceeEEEEeCCceeEEeE
Q 004261 281 LSMSLGGGS-APYYRDTIAVGAFAAMEKGIVVSCSAGNSGPTKASLANVAPWILTVGAGTLDRDFPAYVFLGNKKKATGV 359 (765)
Q Consensus 281 In~SlG~~~-~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~ap~vitVgAst~d~~~~~~~~~~~g~~~~~~ 359 (765)
||+|||... .......+..++.++.++|+++|+||||+|.....+++..+++|+|||.+.
T Consensus 122 i~~s~g~~~~~~~~~~~~~~ai~~a~~~gi~vvaaagn~g~~~~~~Pa~~~~vi~Vga~~~------------------- 182 (306)
T 4h6w_A 122 INVSAGQLTDAGEADTWLEKAIQLCQENNVLLIAATGNDGCECLHVPASLPTVLAVGAMDD------------------- 182 (306)
T ss_dssp EEECCCEEESSSCCCHHHHHHHHHHHHTTCEEEEECCSSSSBCEEETTTSTTCEEEEEECT-------------------
T ss_pred eeccccccccCCCccHHHHHHHHHHHHcCCeEEEecCCCCcccccccccCCcceEEEEecC-------------------
Confidence 999999742 233445677788899999999999999999888888888999999998321
Q ss_pred eeccCCCCCCeeEEEEEecCCCCCCCCCCCCCCCCCCCcccCeEEEEeCCCcchhhhhHHHhhcCccEEEEeecCCCCcc
Q 004261 360 SLYSGNGMGNKPVSLVYNKGSNGSSSSNLCLPGSLQPELVRGKVVICDRGINARVEKGAVVRDAGGVGMILANTAASGEE 439 (765)
Q Consensus 360 s~~~~~~~~~~~~~~v~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~ 439 (765)
T Consensus 183 -------------------------------------------------------------------------------- 182 (306)
T 4h6w_A 183 -------------------------------------------------------------------------------- 182 (306)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccCccccEEEEchhhHHHHHHHHhcCCCceEEEEecceEecccCCCeeeeccCCCCCCCCCCCcCCceeecCCcEEee
Q 004261 440 LVADSHLLPAVAIGRKMGDIVREYAKTVPNPTALLTFGGTVLNVRPSPVVAAFSSRGPNMVTPQILKPDVIGPGVNILAA 519 (765)
Q Consensus 440 ~~~~~~~~p~~~v~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~lKPDi~APG~~I~sa 519 (765)
.+.++.||++|+. ..||||+|||++|+++
T Consensus 183 ----------------------------------------------~~~~~~~s~~g~~-----~~~~di~APG~~i~s~ 211 (306)
T 4h6w_A 183 ----------------------------------------------QGKPVDFSNWGDA-----YQKQGILAPGKDILGA 211 (306)
T ss_dssp ----------------------------------------------TSCBCSSSCBCHH-----HHHHEEEEECSSEEEE
T ss_pred ----------------------------------------------CCCccccccccCC-----cCcceeecCCcCcccc
Confidence 1256788999874 4589999999999999
Q ss_pred ecCCCCCCCcccCccceeeEEeccccchhhhhhhHHHHHHhh----CCCCCHHHHHHHHHhcceeccCCCCCCCCCCCCC
Q 004261 520 WTEASGPTELEKDTRRTKFNIMSGTSMSCPHLSGVAALLKAA----HPDWSPSAIKSALMTTAYVVDNTKSPLHDAADGR 595 (765)
Q Consensus 520 ~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~----~P~~sp~~ik~~L~~TA~~~~~~~~~~~~~~~~~ 595 (765)
++.+ .|..++|||||||||||++|||+++ +|.|+|+|||++|++||+++...+
T Consensus 212 ~~~~-------------~~~~~sGTS~AaP~VaG~~All~s~~~~~~p~~t~~~v~~~L~~tA~~~~~~~---------- 268 (306)
T 4h6w_A 212 KPNG-------------GTIRLSGTSFATPIVSGVAALLLSLQIKRGEKPDPQKVKNALLASATPCNPKD---------- 268 (306)
T ss_dssp CTTS-------------CEEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHTCBCCCTTT----------
T ss_pred cCCC-------------ceeccCCCcchhHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHhhCccCCCCC----------
Confidence 8875 7999999999999999999999865 699999999999999999875432
Q ss_pred CCCCCcCCCcccCccccCC
Q 004261 596 LSTPWAHGSGHVNPQKAIS 614 (765)
Q Consensus 596 ~~~~~~~G~G~vd~~~Al~ 614 (765)
......||+|+||+.+|++
T Consensus 269 ~~~~~~~G~G~ln~~~Av~ 287 (306)
T 4h6w_A 269 TDDQSRCLMGKLNILDAIE 287 (306)
T ss_dssp CSCGGGGTTCBCCHHHHHH
T ss_pred CCCCCCcceeecCHHHHHH
Confidence 1233479999999999987
No 22
>1sh7_A Extracellular subtilisin-like serine proteinase; cold adaptation, psychrotrophic, subtilisin-like proteinase, depentent, hydrolase; HET: PMS; 1.84A {Vibrio SP} PDB: 1s2n_A*
Probab=100.00 E-value=2.2e-48 Score=409.97 Aligned_cols=250 Identities=28% Similarity=0.415 Sum_probs=209.4
Q ss_pred CcccccccCCC-CCCCccccccCCCCCCcEEEEeccCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCceeEeee
Q 004261 108 PQFLGISSDFG-LSAGYSKLDFDKASLDVIIGVLDTGVWPESKSFDDSAMPEVPTKWRGQCESGPDFSPKLCNKKLIGAR 186 (765)
Q Consensus 108 ~~~~g~~~~~~-~~~~~~~~~~~~~G~gV~VaVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~~~~~~~n~kiig~~ 186 (765)
...|++.++.. .++...+|..+.+|+||+|||||||||++||+|.+ +++..+
T Consensus 3 ~~~W~l~~i~~~~~~~~~aw~~~~~G~gv~VaViDtGvd~~h~~l~~---------------------------~~~~~~ 55 (284)
T 1sh7_A 3 NAIWGLDRIDQRNLPLDRNYNANFDGFGVTAYVIDTGVNNNHEEFGG---------------------------RSVSGY 55 (284)
T ss_dssp SCCHHHHHHTCSSSSCCSBCCCSCCCTTCEEEEEESCCCTTCTTTTT---------------------------CEEEEE
T ss_pred CCCcChhhcCCcccCchhhhhcCCCCCCCEEEEEcCCCCCCChhHcC---------------------------Cccccc
Confidence 34577766543 23456789999999999999999999999999964 244455
Q ss_pred eccccccccCCCCCCCCCCCCCCCCCCCCchhhHHhhccCCCCccCcccccCcceeeecCCCeEEEEEeeccCC-CChHH
Q 004261 187 FFSKGYHMAGGSFSKKPNEPESPRDYDGHGTHTASTAAGVPVANASLLGYASGVARGMATHARVATYKVCWKTG-CFGSD 265 (765)
Q Consensus 187 ~~~~g~~~~~~~~~~~~~~~~~~~d~~gHGThVAgi~Ag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~ 265 (765)
+|.+. ...+.|..||||||||||+|.. .||||+|+|+.+|++++.| +..++
T Consensus 56 ~~~~~--------------~~~~~d~~gHGT~vAgiia~~~--------------~GvAp~a~l~~~kv~~~~g~~~~~~ 107 (284)
T 1sh7_A 56 DFVDN--------------DADSSDCNGHGTHVAGTIGGSQ--------------YGVAKNVNIVGVRVLSCSGSGTTSG 107 (284)
T ss_dssp ETTTT--------------BSCCCCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECBCTTSCBCHHH
T ss_pred cccCC--------------CCCCCCCCCcHHHHHHHHhccc--------------CCcCCCCEEEEEEeeCCCCCcCHHH
Confidence 55441 1245678999999999999863 5999999999999998876 78889
Q ss_pred HHHHHHHHHhC--CCcEEEeccCCCCCCCcccHHHHHHHHHHhCCcEEEEecCCCCCCCC-CcccCCCceEEEccCCCCC
Q 004261 266 ILAGIDRAIQD--GVDVLSMSLGGGSAPYYRDTIAVGAFAAMEKGIVVSCSAGNSGPTKA-SLANVAPWILTVGAGTLDR 342 (765)
Q Consensus 266 i~~ai~~a~~~--g~dVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~-~~~~~ap~vitVgAst~d~ 342 (765)
+++||+|++++ +++|||||||... .+.+..++.++.++|++||+||||+|.... .+++..|++|+|||++.
T Consensus 108 ~~~ai~~a~~~~~~~~Vin~S~G~~~----~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~-- 181 (284)
T 1sh7_A 108 VISGVDWVAQNASGPSVANMSLGGGQ----STALDSAVQGAIQSGVSFMLAAGNSNADACNTSPARVPSGVTVGSTTS-- 181 (284)
T ss_dssp HHHHHHHHHHHCCSSEEEEECCCBSC----CHHHHHHHHHHHHTTCEEEEECCSSSSBGGGSBTTTCTTSEEEEEECT--
T ss_pred HHHHHHHHHhCCCCCcEEEeCCCCCC----CHHHHHHHHHHHHCCCEEEEECCcCCCCCCccccccCCCeEEEEEecC--
Confidence 99999999984 7999999999863 356777778899999999999999997653 55788899999998321
Q ss_pred ceeEEEEeCCceeEEeEeeccCCCCCCeeEEEEEecCCCCCCCCCCCCCCCCCCCcccCeEEEEeCCCcchhhhhHHHhh
Q 004261 343 DFPAYVFLGNKKKATGVSLYSGNGMGNKPVSLVYNKGSNGSSSSNLCLPGSLQPELVRGKVVICDRGINARVEKGAVVRD 422 (765)
Q Consensus 343 ~~~~~~~~~~g~~~~~~s~~~~~~~~~~~~~~v~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~ 422 (765)
T Consensus 182 -------------------------------------------------------------------------------- 181 (284)
T 1sh7_A 182 -------------------------------------------------------------------------------- 181 (284)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCccEEEEeecCCCCccccccCccccEEEEchhhHHHHHHHHhcCCCceEEEEecceEecccCCCeeeeccCCCCCCCCC
Q 004261 423 AGGVGMILANTAASGEELVADSHLLPAVAIGRKMGDIVREYAKTVPNPTALLTFGGTVLNVRPSPVVAAFSSRGPNMVTP 502 (765)
Q Consensus 423 ~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~v~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~ 502 (765)
.+.++.||++||..
T Consensus 182 ---------------------------------------------------------------~~~~~~~S~~G~~~--- 195 (284)
T 1sh7_A 182 ---------------------------------------------------------------SDSRSSFSNWGSCV--- 195 (284)
T ss_dssp ---------------------------------------------------------------TSBBCTTCCBSTTC---
T ss_pred ---------------------------------------------------------------CCCcCcccCCCCcc---
Confidence 12578899999864
Q ss_pred CCcCCceeecCCcEEeeecCCCCCCCcccCccceeeEEeccccchhhhhhhHHHHHHhhCCCCCHHHHHHHHHhcceecc
Q 004261 503 QILKPDVIGPGVNILAAWTEASGPTELEKDTRRTKFNIMSGTSMSCPHLSGVAALLKAAHPDWSPSAIKSALMTTAYVVD 582 (765)
Q Consensus 503 ~~lKPDi~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~sp~~ik~~L~~TA~~~~ 582 (765)
||+|||++|+++++.+ .|..++|||||||||||++|||+|++|+|+++|||++|++||++..
T Consensus 196 -----di~ApG~~i~s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~ 257 (284)
T 1sh7_A 196 -----DLFAPGSQIKSAWYDG-------------GYKTISGTSMATPHVAGVAALYLQENNGLTPLQLTGLLNSRASENK 257 (284)
T ss_dssp -----CEEEECSSEEEECTTS-------------SEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEESC
T ss_pred -----EEEeccCCeEEecCCC-------------CEEEccChHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCccCC
Confidence 9999999999998765 7999999999999999999999999999999999999999999764
No 23
>3lpc_A APRB2; protease, subtilase, virulence factor, hydrolase; 1.70A {Dichelobacter nodosus} PDB: 3lpa_A 3lpd_A 3ti9_A 3ti7_A
Probab=100.00 E-value=4.9e-49 Score=427.67 Aligned_cols=305 Identities=26% Similarity=0.370 Sum_probs=225.6
Q ss_pred ccccccCCCCCCCccccccCCCCCCcEEEEeccCCCCCCCCCCCCCCCCCCcccccccccCCCCCCC-----CCCcee--
Q 004261 110 FLGISSDFGLSAGYSKLDFDKASLDVIIGVLDTGVWPESKSFDDSAMPEVPTKWRGQCESGPDFSPK-----LCNKKL-- 182 (765)
Q Consensus 110 ~~g~~~~~~~~~~~~~~~~~~~G~gV~VaVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~~~~~-----~~n~ki-- 182 (765)
+|.+.. ...++..++|..+++|+||+||||||||+ +||+|.+.-.. + .+|... ..+.+.
T Consensus 10 qW~l~~-~~~i~~~~aw~~g~~G~gV~VaViDtGi~-~hp~l~~~~~~-------~-----~~~~~~~~~~~d~~~~~~~ 75 (340)
T 3lpc_A 10 QWHYFD-RYGVKADKVWDMGFTGQNVVVAVVDTGIL-HHRDLNANVLP-------G-----YDFISNSQISLDGDGRDAD 75 (340)
T ss_dssp CHHHHS-TTSCCHHHHHHHTCSCTTCEEEEEESCBC-CCTTTGGGBCC-------C-----EECCCCHHHHCSSSSSBSC
T ss_pred ccCCCC-cCCCCHHHHHHhcCCCCCeEEEEEcCCCC-CChhhhccccc-------C-----ccccCCccccccCCCccCC
Confidence 354443 12355678999999999999999999998 99999753111 1 111000 000000
Q ss_pred -EeeeeccccccccCCCCCCCCCCCCCCCCCCCCchhhHHhhccCCCCccCcccccCcceeeecCCCeEEEEEeeccCCC
Q 004261 183 -IGARFFSKGYHMAGGSFSKKPNEPESPRDYDGHGTHTASTAAGVPVANASLLGYASGVARGMATHARVATYKVCWKTGC 261 (765)
Q Consensus 183 -ig~~~~~~g~~~~~~~~~~~~~~~~~~~d~~gHGThVAgi~Ag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g~ 261 (765)
.....+.+.+.... .+.+.....|..||||||||||+|...+... +.||||+|+|+.+|+++..++
T Consensus 76 ~~~~~~~~~~~~~~~-----~~~~~~~~~d~~gHGT~vAgiia~~~~~~~g--------~~GvAp~a~l~~~~v~~~~~~ 142 (340)
T 3lpc_A 76 PFDEGDWFDNWACGG-----RPDPRKERSDSSWHGSHVAGTIAAVTNNRIG--------VAGVAYGAKVVPVRALGRCGG 142 (340)
T ss_dssp CBCCCCCBCTTTTSC-----TTCGGGSCBCCCCHHHHHHHHHHCCCSSSSS--------CCCTTTTSEEEEEECCBTTBC
T ss_pred ccccccccccccccC-----CCCcccCCCCCCCCHHHHHHHHHccCCCCCc--------ceeecCCCEEEEEEEecCCCC
Confidence 00000000000000 0122234678899999999999998655432 379999999999999988888
Q ss_pred ChHHHHHHHHHHHh----------CCCcEEEeccCCCCCCCcccHHHHHHHHHHhCCcEEEEecCCCCCCCC-CcccCCC
Q 004261 262 FGSDILAGIDRAIQ----------DGVDVLSMSLGGGSAPYYRDTIAVGAFAAMEKGIVVSCSAGNSGPTKA-SLANVAP 330 (765)
Q Consensus 262 ~~~~i~~ai~~a~~----------~g~dVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~-~~~~~ap 330 (765)
..+++++||+||++ .+++|||||||.... ....+..++.++.++|++||+||||+|.... .+++..+
T Consensus 143 ~~~~~~~ai~~a~~~~~~~~~~~~~~~~Vin~S~G~~~~--~~~~~~~~~~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~ 220 (340)
T 3lpc_A 143 YDSDISDGLYWAAGGRIAGIPENRNPAKVINMSLGSDGQ--CSYNAQTMIDRATRLGALVVVAAGNENQNASNTWPTSCN 220 (340)
T ss_dssp CHHHHHHHHHHHHTCCCTTSCCCSSCCSEEEECCCEESC--CCHHHHHHHHHHHHHTCEEEEECCSSSSBGGGEETTTSS
T ss_pred cHHHHHHHHHHHhcccccccccccCCCeEEEeCcCCCCC--cchhHHHHHHHHHhCCcEEEEeCCCCCCCCCCcCCccCC
Confidence 89999999999998 899999999997532 2345666777889999999999999997654 4678889
Q ss_pred ceEEEccCCCCCceeEEEEeCCceeEEeEeeccCCCCCCeeEEEEEecCCCCCCCCCCCCCCCCCCCcccCeEEEEeCCC
Q 004261 331 WILTVGAGTLDRDFPAYVFLGNKKKATGVSLYSGNGMGNKPVSLVYNKGSNGSSSSNLCLPGSLQPELVRGKVVICDRGI 410 (765)
Q Consensus 331 ~vitVgAst~d~~~~~~~~~~~g~~~~~~s~~~~~~~~~~~~~~v~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~ 410 (765)
++|+|||++.
T Consensus 221 ~vi~Vga~~~---------------------------------------------------------------------- 230 (340)
T 3lpc_A 221 NVLSVGATTS---------------------------------------------------------------------- 230 (340)
T ss_dssp SCEEEEEECT----------------------------------------------------------------------
T ss_pred ceEEEecCCC----------------------------------------------------------------------
Confidence 9999998321
Q ss_pred cchhhhhHHHhhcCccEEEEeecCCCCccccccCccccEEEEchhhHHHHHHHHhcCCCceEEEEecceEecccCCCeee
Q 004261 411 NARVEKGAVVRDAGGVGMILANTAASGEELVADSHLLPAVAIGRKMGDIVREYAKTVPNPTALLTFGGTVLNVRPSPVVA 490 (765)
Q Consensus 411 ~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~v~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a 490 (765)
.+.++
T Consensus 231 ---------------------------------------------------------------------------~~~~~ 235 (340)
T 3lpc_A 231 ---------------------------------------------------------------------------RGIRA 235 (340)
T ss_dssp ---------------------------------------------------------------------------TSSBC
T ss_pred ---------------------------------------------------------------------------CCCcC
Confidence 12578
Q ss_pred eccCCCCCCCCCCCcCCceeecCCcEEeeecCCCCCCCcccCccceeeEEeccccchhhhhhhHHHHHHhh-C---CCCC
Q 004261 491 AFSSRGPNMVTPQILKPDVIGPGVNILAAWTEASGPTELEKDTRRTKFNIMSGTSMSCPHLSGVAALLKAA-H---PDWS 566 (765)
Q Consensus 491 ~fSS~Gp~~~~~~~lKPDi~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~-~---P~~s 566 (765)
.||++|| ||||+|||++|+++++.+... .....|..++|||||||||||++|||+|+ + |.++
T Consensus 236 ~~S~~g~--------~~di~ApG~~i~s~~~~~~~~------~~~~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~p~lt 301 (340)
T 3lpc_A 236 SFSNYGV--------DVDLAAPGQDILSTVDSGTRR------PVSDAYSFMAGTSMATPHVSGVAALVISAANSVNKNLT 301 (340)
T ss_dssp TTCCBST--------TCCEEEECSSEEEEEESCSSS------CCSEEEEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred CCCCCCC--------CceEEecCCCeecccCCCCcC------CCCCcceecccHhHHHHHHHHHHHHHHHhhhhhCCCCC
Confidence 8999997 569999999999998865321 12236999999999999999999999998 5 9999
Q ss_pred HHHHHHHHHhcceeccCCCCCCCCCCCCCCCCCCcCCCcccCccccCCC
Q 004261 567 PSAIKSALMTTAYVVDNTKSPLHDAADGRLSTPWAHGSGHVNPQKAISP 615 (765)
Q Consensus 567 p~~ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~G~G~vd~~~Al~~ 615 (765)
+++||++|++||+++.. .....+|||+||+.+|++.
T Consensus 302 ~~~v~~~L~~tA~~~~~-------------~~~~~~G~G~vd~~~Av~~ 337 (340)
T 3lpc_A 302 PAELKDVLVSTTSPFNG-------------RLDRALGSGIVDAEAAVNS 337 (340)
T ss_dssp HHHHHHHHHHTCBCCSS-------------CCSSCCCSSBCCHHHHHHH
T ss_pred HHHHHHHHHhcCCcCCC-------------CCCCCcccceecHHHHHHH
Confidence 99999999999997631 2345899999999999874
No 24
>1wmd_A Protease; alpha-beta hydrolase fold, jelly-roll beta-barrel, hydrolase; 1.30A {Bacillus SP} SCOP: b.18.1.20 c.41.1.1 PDB: 1wme_A 1wmf_A
Probab=100.00 E-value=7.3e-49 Score=439.66 Aligned_cols=294 Identities=26% Similarity=0.326 Sum_probs=224.9
Q ss_pred CCCccccc-cCCCCCCcEEEEeccCCCC------CCCCCCCCCCCCCCcccccccccCCCCCCCCCCceeEeeeeccccc
Q 004261 120 SAGYSKLD-FDKASLDVIIGVLDTGVWP------ESKSFDDSAMPEVPTKWRGQCESGPDFSPKLCNKKLIGARFFSKGY 192 (765)
Q Consensus 120 ~~~~~~~~-~~~~G~gV~VaVIDtGid~------~Hp~f~~~~~~~~~~~w~g~~~~g~~~~~~~~n~kiig~~~~~~g~ 192 (765)
++.+.+|. .+++|+||+|||||||||+ .||+|.+ +++..++|.+.
T Consensus 8 i~~~~~~~~~g~~G~gv~VaViDtGvd~~~~~~~~hp~l~~---------------------------~i~~~~~~~~~- 59 (434)
T 1wmd_A 8 VKADVAQSSYGLYGQGQIVAVADTGLDTGRNDSSMHEAFRG---------------------------KITALYALGRT- 59 (434)
T ss_dssp TTHHHHHHHHCCSCTTCEEEEEESCCTTSCSSTTSCTTTTT---------------------------CEEEEEETTTT-
T ss_pred hCchhhhhccCCCCcccEEEEEecCcCCCCCCcccCcccCC---------------------------CEeeeccccCC-
Confidence 34456887 7999999999999999999 7999863 34555555431
Q ss_pred cccCCCCCCCCCCCCCCCCCCCCchhhHHhhccCCCCccCcccccCcceeeecCCCeEEEEEeeccCCC---ChHHHHHH
Q 004261 193 HMAGGSFSKKPNEPESPRDYDGHGTHTASTAAGVPVANASLLGYASGVARGMATHARVATYKVCWKTGC---FGSDILAG 269 (765)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~d~~gHGThVAgi~Ag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g~---~~~~i~~a 269 (765)
..+.|..||||||||||+|++.. +.||||+|+|+.+|+++..|. ..+++.++
T Consensus 60 --------------~~~~d~~gHGT~VAgiiag~g~~-----------~~GvAp~a~l~~~~v~~~~g~~~~~~~~~~~a 114 (434)
T 1wmd_A 60 --------------NNANDTNGHGTHVAGSVLGNGST-----------NKGMAPQANLVFQSIMDSGGGLGGLPSNLQTL 114 (434)
T ss_dssp --------------TCCCCSSSHHHHHHHHHHCCSSS-----------SCCSSTTSEEEEEECCCTTSSCTTSCSSHHHH
T ss_pred --------------CCCCCCCCcHHHHHHHHHcCCCC-----------ceeeCCCCEEEEEEeecCCCccccccHHHHHH
Confidence 24567899999999999996421 379999999999999987663 45689999
Q ss_pred HHHHHhCCCcEEEeccCCCCCCCcccHHHHHHHHH-HhCCcEEEEecCCCCCCC--CCcccCCCceEEEccCCCCCceeE
Q 004261 270 IDRAIQDGVDVLSMSLGGGSAPYYRDTIAVGAFAA-MEKGIVVSCSAGNSGPTK--ASLANVAPWILTVGAGTLDRDFPA 346 (765)
Q Consensus 270 i~~a~~~g~dVIn~SlG~~~~~~~~~~~~~a~~~a-~~~Gi~vV~AAGN~G~~~--~~~~~~ap~vitVgAst~d~~~~~ 346 (765)
|++|+++|++|||||||......+ +....++.++ .++|++||+||||+|... ...++.++++|+|||++..+...
T Consensus 115 i~~a~~~g~~Vin~S~G~~~~~~~-~~~~~~id~~~~~~gvlvV~AAGN~g~~~~~~~~Pa~~~~vitVga~~~~~~~~- 192 (434)
T 1wmd_A 115 FSQAYSAGARIHTNSWGAAVNGAY-TTDSRNVDDYVRKNDMTILFAAGNEGPNGGTISAPGTAKNAITVGATENLRPSF- 192 (434)
T ss_dssp HHHHHHTTCSEEEECCCBCCTTCC-CHHHHHHHHHHHHSSCEEEEECCSCTTSSSCCCBSTTCSSSEEEEEECCSCGGG-
T ss_pred HHHHHhcCCeEEEecCCCCcCCcC-CHHHHHHHHHHhCCCeEEEEECCCCCCCCcccCCcccCCccEEEecccccCccc-
Confidence 999999999999999998642222 2344444444 589999999999999764 35677899999999964322100
Q ss_pred EEEeCCceeEEeEeeccCCCCCCeeEEEEEecCCCCCCCCCCCCCCCCCCCcccCeEEEEeCCCcchhhhhHHHhhcCcc
Q 004261 347 YVFLGNKKKATGVSLYSGNGMGNKPVSLVYNKGSNGSSSSNLCLPGSLQPELVRGKVVICDRGINARVEKGAVVRDAGGV 426 (765)
Q Consensus 347 ~~~~~~g~~~~~~s~~~~~~~~~~~~~~v~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~ 426 (765)
+ .
T Consensus 193 ------------------------------------------------------~-----------------------~- 194 (434)
T 1wmd_A 193 ------------------------------------------------------G-----------------------S- 194 (434)
T ss_dssp ------------------------------------------------------C-----------------------G-
T ss_pred ------------------------------------------------------C-----------------------c-
Confidence 0 0
Q ss_pred EEEEeecCCCCccccccCccccEEEEchhhHHHHHHHHhcCCCceEEEEecceEecccCCCeeeeccCCCCCCCCCCCcC
Q 004261 427 GMILANTAASGEELVADSHLLPAVAIGRKMGDIVREYAKTVPNPTALLTFGGTVLNVRPSPVVAAFSSRGPNMVTPQILK 506 (765)
Q Consensus 427 g~i~~n~~~~~~~~~~~~~~~p~~~v~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~lK 506 (765)
.....+.++.|||+||+.+ +++|
T Consensus 195 -------------------------------------------------------~~~~~~~~a~fS~~G~~~~--g~~k 217 (434)
T 1wmd_A 195 -------------------------------------------------------YADNINHVAQFSSRGPTKD--GRIK 217 (434)
T ss_dssp -------------------------------------------------------GGSCTTSBCTTSCCCCCTT--SCCC
T ss_pred -------------------------------------------------------ccCCCCccccccCCCCCCC--CCCC
Confidence 0001247899999999986 8999
Q ss_pred CceeecCCcEEeeecCCCCCCCcccCccceeeEEeccccchhhhhhhHHHHHHhhCCCC-----CHHHHHHHHHhcceec
Q 004261 507 PDVIGPGVNILAAWTEASGPTELEKDTRRTKFNIMSGTSMSCPHLSGVAALLKAAHPDW-----SPSAIKSALMTTAYVV 581 (765)
Q Consensus 507 PDi~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~-----sp~~ik~~L~~TA~~~ 581 (765)
|||+|||++|+++++........ .......|..++|||||||||||++|||+|++|++ ++++||++|++||+++
T Consensus 218 pdi~ApG~~i~s~~~~~~~~~~~-~~~~~~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~~~~~s~~~vk~~L~~tA~~~ 296 (434)
T 1wmd_A 218 PDVMAPGTFILSARSSLAPDSSF-WANHDSKYAYMGGTSMATPIVAGNVAQLREHFVKNRGITPKPSLLKAALIAGAADI 296 (434)
T ss_dssp CCEEEECSSEEEECCTTCCGGGS-SEEEETTEEEECSHHHHHHHHHHHHHHHHHHHHHHSSSCCCHHHHHHHHHHHCBCC
T ss_pred ceEEcCCCCeEecCCCCCCCccc-ccCCCCceEeecchhHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHcCCccc
Confidence 99999999999998653210000 00012379999999999999999999999999875 8999999999999875
Q ss_pred cCCCCCCCCCCCCCCCCCCcCCCcccCccccCCCC
Q 004261 582 DNTKSPLHDAADGRLSTPWAHGSGHVNPQKAISPG 616 (765)
Q Consensus 582 ~~~~~~~~~~~~~~~~~~~~~G~G~vd~~~Al~~g 616 (765)
. ...+.+.||||+||+.+|++..
T Consensus 297 ~------------~~~~~~~~G~G~vd~~~a~~~~ 319 (434)
T 1wmd_A 297 G------------LGYPNGNQGWGRVTLDKSLNVA 319 (434)
T ss_dssp S------------SCSSCTTTTTCBCCHHHHHTCE
T ss_pred C------------CCCCCccCCcCeEeHHHhcccc
Confidence 2 1245679999999999999754
No 25
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=100.00 E-value=3.1e-48 Score=464.59 Aligned_cols=359 Identities=21% Similarity=0.230 Sum_probs=247.2
Q ss_pred CCCCCCchhhHHhhccCCCCccCcccccCcceeeecCCCeEEEEEeeccCC---CChHHHHHHHHHHHh-----CCCcEE
Q 004261 210 RDYDGHGTHTASTAAGVPVANASLLGYASGVARGMATHARVATYKVCWKTG---CFGSDILAGIDRAIQ-----DGVDVL 281 (765)
Q Consensus 210 ~d~~gHGThVAgi~Ag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g---~~~~~i~~ai~~a~~-----~g~dVI 281 (765)
.|++||||||||||||.. ++.. +.||||+|+|+.+|+++..+ ...++++.+|.+|++ .|++||
T Consensus 267 ~D~~GHGThVAGIIAa~~-N~~g--------~~GVAP~AkI~~vKVld~~~g~~~t~s~l~~AI~~Aid~a~~~~gadVI 337 (1354)
T 3lxu_X 267 GMSSPHGTHVSSIASGNH-SSRD--------VDGVAPNAKIVSMTIGDGRLGSMETGTALVRAMTKVMELCRDGRRIDVI 337 (1354)
T ss_dssp ECCCHHHHHHHHHHCCCC-SSSS--------SCCSCTTCEEEEEECBCTTTSSCBCHHHHHHHHHHHHHHHHTTCCCCEE
T ss_pred CCCCCcHHHHHHHHhcCC-CCCC--------ceeecCCCEEEEEEeccCCCCcccChHHHHHHHHHHHHHHhhcCCceEE
Confidence 578899999999999986 3221 37999999999999997653 355678888888887 799999
Q ss_pred EeccCCCCCCCcccHHHHHHHHHH-hCCcEEEEecCCCCCCCCC--ccc--CCCceEEEccCCCCCceeEEEEeCCceeE
Q 004261 282 SMSLGGGSAPYYRDTIAVGAFAAM-EKGIVVSCSAGNSGPTKAS--LAN--VAPWILTVGAGTLDRDFPAYVFLGNKKKA 356 (765)
Q Consensus 282 n~SlG~~~~~~~~~~~~~a~~~a~-~~Gi~vV~AAGN~G~~~~~--~~~--~ap~vitVgAst~d~~~~~~~~~~~g~~~ 356 (765)
|||||........+.+..++.++. ++|++||+||||+|+...+ .++ .++++|+|||++.+.........
T Consensus 338 NmS~G~~~~~~~~~~l~~aI~~A~~~~GVlVVaAAGN~G~~~~ti~~PA~~ss~~VItVGAtd~~~~~~a~ys~------ 411 (1354)
T 3lxu_X 338 NMSYGEHANWSNSGRIGELMNEVVNKYGVVWVASAGNHGPALCTVGTPPDISQPSLIGVGAYVSPQMMEAEYAM------ 411 (1354)
T ss_dssp EECCCCCCSCSSCCHHHHHHHHHHHTSCCEEEEECCSCCSSSSCCCTTTCSSSSCEEEEEEECCTTCCCC----------
T ss_pred EcCCccCCCCCccHHHHHHHHHHHHhCCcEEEEeCCCCCCCCCccCCcccccCCceEEEEeecCCCCccccccc------
Confidence 999999754334556777777775 8999999999999986543 455 48999999996543221000000
Q ss_pred EeEeeccCCCCCCeeEEEEEecCCCCCCCCCCCCCCCCCCCcccCeEEEEeCCCcchhhhhHHHhhcCccEEEEeecCCC
Q 004261 357 TGVSLYSGNGMGNKPVSLVYNKGSNGSSSSNLCLPGSLQPELVRGKVVICDRGINARVEKGAVVRDAGGVGMILANTAAS 436 (765)
Q Consensus 357 ~~~s~~~~~~~~~~~~~~v~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~ 436 (765)
T Consensus 412 -------------------------------------------------------------------------------- 411 (1354)
T 3lxu_X 412 -------------------------------------------------------------------------------- 411 (1354)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CccccccCccccEEEEchhhHHHHHHHHhcCCCceEEEEecceEecccCCCeeeeccCCCCCCCCCCCcCCceeecCCcE
Q 004261 437 GEELVADSHLLPAVAIGRKMGDIVREYAKTVPNPTALLTFGGTVLNVRPSPVVAAFSSRGPNMVTPQILKPDVIGPGVNI 516 (765)
Q Consensus 437 ~~~~~~~~~~~p~~~v~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~lKPDi~APG~~I 516 (765)
.....+.++.|||+||+.+ +.+||||+|||++|
T Consensus 412 ---------------------------------------------~~~~~g~~asFSS~GPt~d--g~~KpDIaAPG~~I 444 (1354)
T 3lxu_X 412 ---------------------------------------------REKLPGNVYTWTSRDPCID--GGQGVTVCAPGGAI 444 (1354)
T ss_dssp ---------------------------------------------------CCCCCCCCSCCSS--SSCCEEEEEEC---
T ss_pred ---------------------------------------------ccCCCCccccccCCCCCcc--CCCcceEEecCceE
Confidence 0001136899999999986 89999999999999
Q ss_pred EeeecCCCCCCCcccCccceeeEEeccccchhhhhhhHHHHHHh----hCCCCCHHHHHHHHHhcceeccCCCCCCCCCC
Q 004261 517 LAAWTEASGPTELEKDTRRTKFNIMSGTSMSCPHLSGVAALLKA----AHPDWSPSAIKSALMTTAYVVDNTKSPLHDAA 592 (765)
Q Consensus 517 ~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~----~~P~~sp~~ik~~L~~TA~~~~~~~~~~~~~~ 592 (765)
+++.....+ .|..++|||||||||||++|||++ .+|+|++.+||++|++||+++..
T Consensus 445 ~St~~~~~~-----------~y~~~SGTSmAAP~VAGvAALLLSalkq~~P~LTp~qVk~lL~~TA~~~~~--------- 504 (1354)
T 3lxu_X 445 ASVPQFTMS-----------KSQLMNGTSMAAPHVAGAVALLISGLKQQNIEYSPYSIKRAISVTATKLGY--------- 504 (1354)
T ss_dssp -----------------------CCCCGGGCHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHTTSBCCTT---------
T ss_pred EEeecCCCC-----------ceecCCCCCHHHHHHHHHHHHHHHhhHhhCCCCCHHHHHHHHHHhCccCCC---------
Confidence 998654322 789999999999999999999987 79999999999999999998642
Q ss_pred CCCCCCCCcCCCcccCccccCCCCccccCChhhHHHhhhccCCChheeeeeccCCcccccCCCCCCCCCCCCceeeeccC
Q 004261 593 DGRLSTPWAHGSGHVNPQKAISPGLVYDASTEDYVAFLCSLGYTIEHVQAIVKRPNITCTRKFNTPGELNYPSFSVLFGD 672 (765)
Q Consensus 593 ~~~~~~~~~~G~G~vd~~~Al~~glv~~~~~~d~~~~l~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~ln~ps~~~~~~~ 672 (765)
.+++.||||+||+.+|++..+.++..+.+++.|+|..++.... .+..+. + .+ +...
T Consensus 505 ----~~~~~~G~GlLDa~~AV~~a~~~~~~p~~~v~f~~~v~~~~~r-gIylR~-----~-------~~--~~~~----- 560 (1354)
T 3lxu_X 505 ----VDPFAQGHGLLNVEKAFEHLTEHRQSKDNMLRFSVRVGNNADK-GIHLRQ-----G-------VQ--RNSI----- 560 (1354)
T ss_dssp ----SCTTTSSSSBCCHHHHHHHHHTTTTCGGGGEEEEEEETTTTBS-SEEECS-----S-------CC--CSCE-----
T ss_pred ----CCcccccCCEeCHHHHHHHHHhcCCCCccceEEEEEecCCCCC-ceEEec-----c-------cc--CCce-----
Confidence 3446899999999999999999999999999999998753221 111111 0 00 1100
Q ss_pred cceEEEEEEEEecC---CC-ceeE--EEEEeCCCCceEEEEcCeEEEeecCeeEEEEEEEEEecCCCCCCCcEEEEEEEE
Q 004261 673 QRVVRYTRELTNVG---PA-RSLY--NVTADGPSTVGISVRPKRLLFRTVGEKKRYTVTFVAKNGDQKMGGAAFGSIVWG 746 (765)
Q Consensus 673 ~~~~~~~rtvtn~g---~~-~~ty--~~~~~~~~g~~v~v~p~~l~~~~~~~~~~~~vt~~~~~~~~~~~~~~~G~~~~~ 746 (765)
....+++-++.|.. .. ...| ++.+...+ --|. -|+.|.+ .++.++|.|.|+...... +..+++|..-
T Consensus 561 ~~tv~V~p~f~~~~~~~~~~~i~f~~~l~L~~t~-~wv~-~p~~l~l--~~~~r~~~v~vDp~~L~~---G~h~~~v~~~ 633 (1354)
T 3lxu_X 561 DYNVYIEPIFYNDKEADPKDKFNFNVRLNLIASQ-PWVQ-CGAFLDL--SYGTRSIAVRVDPTGLQP---GVHSAVIRAY 633 (1354)
T ss_dssp EEEEEEEEEESSCSCSSSTTCSCCCCEEEEEESS-TTEE-ECSCEEC--TTSCEEEEEEECGGGCCS---EEEEEEEEEE
T ss_pred EEEEEEeeeecCcccCChhhccceEEEEEEecCC-Ccee-cccceee--cCCCceEEEEECCCCCCC---cceeEEEEEE
Confidence 12333333342211 11 1112 22332221 1233 3778876 688899999998776433 5789999876
Q ss_pred C-----CccEEEEEEEEEec
Q 004261 747 N-----AQHQVRSPVAFSWT 761 (765)
Q Consensus 747 ~-----~~~~v~~P~~~~~~ 761 (765)
| .+...|+||.|...
T Consensus 634 D~~~~~~gp~f~ipvTv~~P 653 (1354)
T 3lxu_X 634 DTDCVQKGSLFEIPVTVVQP 653 (1354)
T ss_dssp ESSCTTSCCSEEEEEEEEEC
T ss_pred EcCCcccCceEEeeEEEEee
Confidence 5 45899999988754
No 26
>2b6n_A Proteinase K; S binding, substrate specificity, proteinase K, subtilase, psychrotrophic, psychrophilic, hydrolase; 1.80A {Serratia SP}
Probab=100.00 E-value=5.3e-48 Score=406.57 Aligned_cols=251 Identities=30% Similarity=0.391 Sum_probs=208.2
Q ss_pred CcccccccCCC-CCCCccccccCCCCCCcEEEEeccCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCceeEeee
Q 004261 108 PQFLGISSDFG-LSAGYSKLDFDKASLDVIIGVLDTGVWPESKSFDDSAMPEVPTKWRGQCESGPDFSPKLCNKKLIGAR 186 (765)
Q Consensus 108 ~~~~g~~~~~~-~~~~~~~~~~~~~G~gV~VaVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~~~~~~~n~kiig~~ 186 (765)
...|+++++.. .++...+|..+++|+||+|+|||||||++||+|.+. +...+
T Consensus 5 ~~~W~l~~i~~~~~~~~~~~~~~~~G~gv~VaViDtGid~~Hpdl~~~---------------------------~~~~~ 57 (278)
T 2b6n_A 5 SPTWGIDRIDQRNLPLDNNYHTDYDGSGVTAFVIDTGVLNTHNEFGGR---------------------------ASSGY 57 (278)
T ss_dssp SCCHHHHHHTCSSSSCCSEEECSCCCTTCEEEEEESCCCTTCGGGTTC---------------------------EEEEE
T ss_pred CCCCCccccCCccCCcchhcccCCCCCCCEEEEEeCCCCCCChhHhcc---------------------------cccCe
Confidence 34577766543 244566899999999999999999999999999642 34445
Q ss_pred eccccccccCCCCCCCCCCCCCCCCCCCCchhhHHhhccCCCCccCcccccCcceeeecCCCeEEEEEeeccCC-CChHH
Q 004261 187 FFSKGYHMAGGSFSKKPNEPESPRDYDGHGTHTASTAAGVPVANASLLGYASGVARGMATHARVATYKVCWKTG-CFGSD 265 (765)
Q Consensus 187 ~~~~g~~~~~~~~~~~~~~~~~~~d~~gHGThVAgi~Ag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~ 265 (765)
+|.++ ...+.|..||||||||||+|.. .||||+|+|+.+|++++.+ +..++
T Consensus 58 d~~~~--------------~~~~~d~~gHGT~vAgiia~~~--------------~GvAp~a~i~~~~v~~~~g~~~~~~ 109 (278)
T 2b6n_A 58 DFIDN--------------DYDATDCNGHGTHVAGTIGGST--------------YGVAKNVNVVGVRVLNCSGSGSNSG 109 (278)
T ss_dssp ETTTT--------------BSCCCCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTSCCCHHH
T ss_pred ecCCC--------------CCCCCCCCCcHHHHHHHHHCCC--------------cCCCCCCeEEEEEEECCCCCccHHH
Confidence 55441 1235678999999999999862 5999999999999998876 78889
Q ss_pred HHHHHHHHHh--CCCcEEEeccCCCCCCCcccHHHHHHHHHHhCCcEEEEecCCCCCCCC-CcccCCCceEEEccCCCCC
Q 004261 266 ILAGIDRAIQ--DGVDVLSMSLGGGSAPYYRDTIAVGAFAAMEKGIVVSCSAGNSGPTKA-SLANVAPWILTVGAGTLDR 342 (765)
Q Consensus 266 i~~ai~~a~~--~g~dVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~-~~~~~ap~vitVgAst~d~ 342 (765)
+++||+|+++ .+++|||||||... .+.+..++.++.++|++||+||||+|.... ..++..+++|+|||.+.
T Consensus 110 ~~~ai~~a~~~~~g~~Vin~S~G~~~----~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~-- 183 (278)
T 2b6n_A 110 VIAGINWVKNNASGPAVANMSLGGGA----SQATDDAVNAAVAAGITFVVAAGNDNSNACNYSPARAADAITVGSTTS-- 183 (278)
T ss_dssp HHHHHHHHHHHCCSSEEEEECCCEEC----CHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECT--
T ss_pred HHHHHHHHHhCCCCCeEEEECCCCCc----CHHHHHHHHHHHHCCCEEEEEeCCCCCCCCCcCcccCCCeEEEEeeCC--
Confidence 9999999997 59999999999854 356677777889999999999999997654 35778899999998321
Q ss_pred ceeEEEEeCCceeEEeEeeccCCCCCCeeEEEEEecCCCCCCCCCCCCCCCCCCCcccCeEEEEeCCCcchhhhhHHHhh
Q 004261 343 DFPAYVFLGNKKKATGVSLYSGNGMGNKPVSLVYNKGSNGSSSSNLCLPGSLQPELVRGKVVICDRGINARVEKGAVVRD 422 (765)
Q Consensus 343 ~~~~~~~~~~g~~~~~~s~~~~~~~~~~~~~~v~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~ 422 (765)
T Consensus 184 -------------------------------------------------------------------------------- 183 (278)
T 2b6n_A 184 -------------------------------------------------------------------------------- 183 (278)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCccEEEEeecCCCCccccccCccccEEEEchhhHHHHHHHHhcCCCceEEEEecceEecccCCCeeeeccCCCCCCCCC
Q 004261 423 AGGVGMILANTAASGEELVADSHLLPAVAIGRKMGDIVREYAKTVPNPTALLTFGGTVLNVRPSPVVAAFSSRGPNMVTP 502 (765)
Q Consensus 423 ~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~v~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~ 502 (765)
.+.++.||++||.
T Consensus 184 ---------------------------------------------------------------~~~~~~~S~~G~~---- 196 (278)
T 2b6n_A 184 ---------------------------------------------------------------NDSRSSFSNYGTC---- 196 (278)
T ss_dssp ---------------------------------------------------------------TSBBCTTCCBSTT----
T ss_pred ---------------------------------------------------------------CCCcCCcCCCCCC----
Confidence 1256889999985
Q ss_pred CCcCCceeecCCcEEeeecCCCCCCCcccCccceeeEEeccccchhhhhhhHHHHHHhhCCCCCHHHHHHHHHhcceec
Q 004261 503 QILKPDVIGPGVNILAAWTEASGPTELEKDTRRTKFNIMSGTSMSCPHLSGVAALLKAAHPDWSPSAIKSALMTTAYVV 581 (765)
Q Consensus 503 ~~lKPDi~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~sp~~ik~~L~~TA~~~ 581 (765)
|||+|||++|++++..... .|..++|||||||||||++|||+|++|+|++.|||++|++||++.
T Consensus 197 ----~di~ApG~~i~s~~~~~~~-----------~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~ 260 (278)
T 2b6n_A 197 ----LDIYAPGSSITSSWYTSNS-----------ATNTISGTSMASPHVAGVAALYLDENPNLSPAQVTNLLKTRATAD 260 (278)
T ss_dssp ----CCEEEECSSEEEECTTSTT-----------CEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEES
T ss_pred ----CeEEeCCCCeECcccCCCC-----------CEEEeCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccC
Confidence 4999999999999875322 799999999999999999999999999999999999999999875
No 27
>4dzt_A Aqualysin-1, aqualysin-I; serine protease, calcium binding, inhibitor, hydrolase-hydro inhibitor complex; HET: PMS; 1.95A {Thermus aquaticus}
Probab=100.00 E-value=7.2e-48 Score=405.71 Aligned_cols=252 Identities=29% Similarity=0.400 Sum_probs=211.3
Q ss_pred CCCcccccccCCC-CCCCccccccCCCCCCcEEEEeccCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCceeEe
Q 004261 106 RSPQFLGISSDFG-LSAGYSKLDFDKASLDVIIGVLDTGVWPESKSFDDSAMPEVPTKWRGQCESGPDFSPKLCNKKLIG 184 (765)
Q Consensus 106 ~s~~~~g~~~~~~-~~~~~~~~~~~~~G~gV~VaVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~~~~~~~n~kiig 184 (765)
+.+..|++.+... .++...+|..+.+|+||+|||||||||++||+|.+ ++..
T Consensus 3 q~~~~W~l~~i~~~~~~~~~a~~~~~~G~gv~VaViDtGvd~~h~~l~~---------------------------~~~~ 55 (276)
T 4dzt_A 3 QSPAPWGLDRIDQRDLPLSNSYTYTATGRGVNVYVIDTGIRTTHREFGG---------------------------RARV 55 (276)
T ss_dssp ESSCCHHHHHHTSSSSSCCSCEECSCCCTTCEEEEEESCCCTTCGGGTT---------------------------CEEE
T ss_pred cCCCCCChhhcCCccCCcccceecCCCCCCcEEEEEccCCCCCChhHcc---------------------------Ceec
Confidence 3445577766543 35567789999999999999999999999999964 2344
Q ss_pred eeeccccccccCCCCCCCCCCCCCCCCCCCCchhhHHhhccCCCCccCcccccCcceeeecCCCeEEEEEeeccCC-CCh
Q 004261 185 ARFFSKGYHMAGGSFSKKPNEPESPRDYDGHGTHTASTAAGVPVANASLLGYASGVARGMATHARVATYKVCWKTG-CFG 263 (765)
Q Consensus 185 ~~~~~~g~~~~~~~~~~~~~~~~~~~d~~gHGThVAgi~Ag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~ 263 (765)
.++|.. ..+.|.+||||||||||+|.. .||||+|+|+.+|++++.+ +..
T Consensus 56 ~~~~~~----------------~~~~d~~gHGT~vAgiiag~~--------------~GvAp~a~l~~~~v~~~~~~~~~ 105 (276)
T 4dzt_A 56 GYDALG----------------GNGQDCNGHGTHVAGTIGGVT--------------YGVAKAVNLYAVRVLDCNGSGST 105 (276)
T ss_dssp EEETTS----------------SCSCCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTSCCCH
T ss_pred cccCCC----------------CCCCCCCCCHHHHHHHHHccc--------------cCCCCCCEEEEEEEeCCCCCcCH
Confidence 444443 234678899999999999872 6999999999999998877 888
Q ss_pred HHHHHHHHHHHhC--CCcEEEeccCCCCCCCcccHHHHHHHHHHhCCcEEEEecCCCCCCCCC-cccCCCceEEEccCCC
Q 004261 264 SDILAGIDRAIQD--GVDVLSMSLGGGSAPYYRDTIAVGAFAAMEKGIVVSCSAGNSGPTKAS-LANVAPWILTVGAGTL 340 (765)
Q Consensus 264 ~~i~~ai~~a~~~--g~dVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~-~~~~ap~vitVgAst~ 340 (765)
+++++||+|++++ +++|||||||... ...+..++.++.++|+++|+||||+|..... .++..+++|+|||.+.
T Consensus 106 ~~~~~ai~~~~~~~~~~~vin~S~g~~~----~~~~~~a~~~a~~~gvlvv~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~ 181 (276)
T 4dzt_A 106 SGVIAGVDWVTRNHRRPAVANMSLGGGV----STALDNAVKNSIAAGVVYAVAAGNDNANACNYSPARVAEALTVGATTS 181 (276)
T ss_dssp HHHHHHHHHHHHHCCSSEEEEECCCEEC----CHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECT
T ss_pred HHHHHHHHHHHhcCCCCeEEEECCCCCC----CHHHHHHHHHHHhCCCEEEEECCCCCCCCCCcCcccCCCEEEEEEECC
Confidence 8999999999987 9999999999753 3567777788999999999999999976554 3788899999998321
Q ss_pred CCceeEEEEeCCceeEEeEeeccCCCCCCeeEEEEEecCCCCCCCCCCCCCCCCCCCcccCeEEEEeCCCcchhhhhHHH
Q 004261 341 DRDFPAYVFLGNKKKATGVSLYSGNGMGNKPVSLVYNKGSNGSSSSNLCLPGSLQPELVRGKVVICDRGINARVEKGAVV 420 (765)
Q Consensus 341 d~~~~~~~~~~~g~~~~~~s~~~~~~~~~~~~~~v~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~ 420 (765)
T Consensus 182 -------------------------------------------------------------------------------- 181 (276)
T 4dzt_A 182 -------------------------------------------------------------------------------- 181 (276)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhcCccEEEEeecCCCCccccccCccccEEEEchhhHHHHHHHHhcCCCceEEEEecceEecccCCCeeeeccCCCCCCC
Q 004261 421 RDAGGVGMILANTAASGEELVADSHLLPAVAIGRKMGDIVREYAKTVPNPTALLTFGGTVLNVRPSPVVAAFSSRGPNMV 500 (765)
Q Consensus 421 ~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~v~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~ 500 (765)
.+.++.||++||..
T Consensus 182 -----------------------------------------------------------------~~~~~~~S~~g~~~- 195 (276)
T 4dzt_A 182 -----------------------------------------------------------------SDARASFSNYGSCV- 195 (276)
T ss_dssp -----------------------------------------------------------------TSBBCTTCCBSTTC-
T ss_pred -----------------------------------------------------------------CCCcCCcCCCCCCc-
Confidence 12578999999965
Q ss_pred CCCCcCCceeecCCcEEeeecCCCCCCCcccCccceeeEEeccccchhhhhhhHHHHHHhhCCCCCHHHHHHHHHhccee
Q 004261 501 TPQILKPDVIGPGVNILAAWTEASGPTELEKDTRRTKFNIMSGTSMSCPHLSGVAALLKAAHPDWSPSAIKSALMTTAYV 580 (765)
Q Consensus 501 ~~~~lKPDi~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~sp~~ik~~L~~TA~~ 580 (765)
||+|||++|++++..... .|..++|||||||+|||++|||+|++|+++++|||++|++||++
T Consensus 196 -------dv~ApG~~i~s~~~~~~~-----------~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~ 257 (276)
T 4dzt_A 196 -------DLFAPGASIPSAWYTSDT-----------ATQTLNGTSMATPHVAGVAALYLEQNPSATPASVASAILNGATT 257 (276)
T ss_dssp -------CEEEECSSEEEECTTSSS-----------CEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEE
T ss_pred -------eEEeCCCCeEccccCCCC-----------ceEEeeEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCcC
Confidence 999999999999876533 79999999999999999999999999999999999999999998
Q ss_pred cc
Q 004261 581 VD 582 (765)
Q Consensus 581 ~~ 582 (765)
..
T Consensus 258 ~~ 259 (276)
T 4dzt_A 258 GR 259 (276)
T ss_dssp SC
T ss_pred Cc
Confidence 64
No 28
>2pwa_A Proteinase K; structure, alanine boronic acid, hydrolase; 0.83A {Engyodontium album} SCOP: c.41.1.1 PDB: 1p7v_A 1p7w_A 2dqk_A 2duj_A 2g4v_A 2hd4_A 2hpz_A 2id8_A 2pq2_A 1ic6_A 2pwb_A* 2pyz_A* 2v8b_A 3aj8_A 3aj9_A 3dyb_A* 3gt3_A* 3gt4_A* 3l1k_A 3osz_A ...
Probab=100.00 E-value=7.7e-48 Score=404.78 Aligned_cols=259 Identities=29% Similarity=0.358 Sum_probs=210.4
Q ss_pred CCcccccccCCCCC--CCccccccCCCCCCcEEEEeccCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCceeEe
Q 004261 107 SPQFLGISSDFGLS--AGYSKLDFDKASLDVIIGVLDTGVWPESKSFDDSAMPEVPTKWRGQCESGPDFSPKLCNKKLIG 184 (765)
Q Consensus 107 s~~~~g~~~~~~~~--~~~~~~~~~~~G~gV~VaVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~~~~~~~n~kiig 184 (765)
....|++.++.... .....|. ..+|+||+|+|||||||++||+|.+. +..
T Consensus 4 ~~~~W~l~~i~~~~~~~~~~~~~-~~~G~gv~VaViDsGvd~~H~~l~~~---------------------------~~~ 55 (279)
T 2pwa_A 4 TNAPWGLARISSTSPGTSTYYYD-ESAGQGSCVYVIDTGIEASHPEFEGR---------------------------AQM 55 (279)
T ss_dssp TTCCHHHHHHTCSSTTCCCEECC-TTTTTTEEEEEEESCCCTTCGGGTTC---------------------------EEE
T ss_pred CCCCcChhhcCCCCccccccccc-CCCCCCCEEEEEeCCCCCCChhHhCc---------------------------ccc
Confidence 34557776654411 1122454 37899999999999999999999742 344
Q ss_pred eeeccccccccCCCCCCCCCCCCCCCCCCCCchhhHHhhccCCCCccCcccccCcceeeecCCCeEEEEEeeccCC-CCh
Q 004261 185 ARFFSKGYHMAGGSFSKKPNEPESPRDYDGHGTHTASTAAGVPVANASLLGYASGVARGMATHARVATYKVCWKTG-CFG 263 (765)
Q Consensus 185 ~~~~~~g~~~~~~~~~~~~~~~~~~~d~~gHGThVAgi~Ag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~ 263 (765)
.++|.+ .+.|..||||||||||+|+. .||||+|+|+.+|++++.+ +..
T Consensus 56 ~~~~~~-----------------~~~d~~gHGT~vAgiia~~~--------------~GvAp~a~i~~~~v~~~~g~~~~ 104 (279)
T 2pwa_A 56 VKTYYY-----------------SSRDGNGHGTHCAGTVGSRT--------------YGVAKKTQLFGVKVLDDNGSGQY 104 (279)
T ss_dssp EEESSS-----------------CSSCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTSCCCH
T ss_pred ccCCCC-----------------CCCCCCCCHHHHHHHHHhcc--------------cccCCCCEEEEEEeEcCCCCcCH
Confidence 444431 24568899999999999862 6999999999999998877 888
Q ss_pred HHHHHHHHHHHhCCC-------cEEEeccCCCCCCCcccHHHHHHHHHHhCCcEEEEecCCCCCCCC-CcccCCCceEEE
Q 004261 264 SDILAGIDRAIQDGV-------DVLSMSLGGGSAPYYRDTIAVGAFAAMEKGIVVSCSAGNSGPTKA-SLANVAPWILTV 335 (765)
Q Consensus 264 ~~i~~ai~~a~~~g~-------dVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~-~~~~~ap~vitV 335 (765)
+++++||+|++++++ +|||||||... .+.+..++.++.++|++||+||||+|.... .+++..|++|+|
T Consensus 105 ~~~~~ai~~a~~~~~~~~~~~~~Vin~S~G~~~----~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~V 180 (279)
T 2pwa_A 105 STIIAGMDFVASDKNNRNCPKGVVASLSLGGGY----SSSVNSAAARLQSSGVMVAVAAGNNNADARNYSPASEPSVCTV 180 (279)
T ss_dssp HHHHHHHHHHHHHGGGSCCTTEEEEEECCCEEC----CHHHHHHHHHHHHTTEEEEEECCSSSSBGGGEETTTCTTSEEE
T ss_pred HHHHHHHHHHHhcCccccCCCccEEEecCCCCC----CHHHHHHHHHHHHCCCEEEEECCCCCCcCCCcCcccCCcEEEE
Confidence 999999999999887 99999999752 356777778899999999999999997654 457888999999
Q ss_pred ccCCCCCceeEEEEeCCceeEEeEeeccCCCCCCeeEEEEEecCCCCCCCCCCCCCCCCCCCcccCeEEEEeCCCcchhh
Q 004261 336 GAGTLDRDFPAYVFLGNKKKATGVSLYSGNGMGNKPVSLVYNKGSNGSSSSNLCLPGSLQPELVRGKVVICDRGINARVE 415 (765)
Q Consensus 336 gAst~d~~~~~~~~~~~g~~~~~~s~~~~~~~~~~~~~~v~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~ 415 (765)
||.+.
T Consensus 181 ga~~~--------------------------------------------------------------------------- 185 (279)
T 2pwa_A 181 GASDR--------------------------------------------------------------------------- 185 (279)
T ss_dssp EEECT---------------------------------------------------------------------------
T ss_pred EEecC---------------------------------------------------------------------------
Confidence 98321
Q ss_pred hhHHHhhcCccEEEEeecCCCCccccccCccccEEEEchhhHHHHHHHHhcCCCceEEEEecceEecccCCCeeeeccCC
Q 004261 416 KGAVVRDAGGVGMILANTAASGEELVADSHLLPAVAIGRKMGDIVREYAKTVPNPTALLTFGGTVLNVRPSPVVAAFSSR 495 (765)
Q Consensus 416 ~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~v~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~ 495 (765)
.+.++.||++
T Consensus 186 ----------------------------------------------------------------------~~~~~~~S~~ 195 (279)
T 2pwa_A 186 ----------------------------------------------------------------------YDRRSSFSNY 195 (279)
T ss_dssp ----------------------------------------------------------------------TSBBCTTCCB
T ss_pred ----------------------------------------------------------------------CCCcCCcCCC
Confidence 1257899999
Q ss_pred CCCCCCCCCcCCceeecCCcEEeeecCCCCCCCcccCccceeeEEeccccchhhhhhhHHHHHHhhCCCCCHHHHHHHHH
Q 004261 496 GPNMVTPQILKPDVIGPGVNILAAWTEASGPTELEKDTRRTKFNIMSGTSMSCPHLSGVAALLKAAHPDWSPSAIKSALM 575 (765)
Q Consensus 496 Gp~~~~~~~lKPDi~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~sp~~ik~~L~ 575 (765)
||. |||+|||++|+++++.+ .|..++|||||||||||++|||+|+ |++++.|||++|+
T Consensus 196 G~~--------~di~APG~~i~s~~~~~-------------~~~~~sGTS~AaP~VaG~aAll~~~-p~lt~~~v~~~L~ 253 (279)
T 2pwa_A 196 GSV--------LDIFGPGTDILSTWIGG-------------STRSISGTSMATPHVAGLAAYLMTL-GKTTAASACRYIA 253 (279)
T ss_dssp STT--------CCEEEECSSEEEEETTT-------------EEEEECSHHHHHHHHHHHHHHHHHT-TSCCTTTHHHHHH
T ss_pred CCc--------ceEEEecCCeEEeecCC-------------CEEEcCChHHHHHHHHHHHHHHHhC-CCCCHHHHHHHHH
Confidence 985 49999999999999875 7999999999999999999999999 9999999999999
Q ss_pred hcceeccCCCCCCCCCCCCCCCCCCcCCCcccCccc
Q 004261 576 TTAYVVDNTKSPLHDAADGRLSTPWAHGSGHVNPQK 611 (765)
Q Consensus 576 ~TA~~~~~~~~~~~~~~~~~~~~~~~~G~G~vd~~~ 611 (765)
+||++... ..+|+|..|+..
T Consensus 254 ~tA~~~~~----------------~~~~~g~~n~l~ 273 (279)
T 2pwa_A 254 DTANKGDL----------------SNIPFGTVNLLA 273 (279)
T ss_dssp HHSEESCC----------------BSCCTTSCCEEC
T ss_pred HhCccccc----------------CCCCCCCccEee
Confidence 99997531 146778777643
No 29
>2oxa_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria} PDB: 3hjr_A
Probab=100.00 E-value=8.5e-47 Score=438.86 Aligned_cols=299 Identities=22% Similarity=0.211 Sum_probs=203.9
Q ss_pred CCCCccccccCCCCCCcEEEEeccCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCceeEeeeeccccccccCCC
Q 004261 119 LSAGYSKLDFDKASLDVIIGVLDTGVWPESKSFDDSAMPEVPTKWRGQCESGPDFSPKLCNKKLIGARFFSKGYHMAGGS 198 (765)
Q Consensus 119 ~~~~~~~~~~~~~G~gV~VaVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~~~~~~~n~kiig~~~~~~g~~~~~~~ 198 (765)
.++...+|..+++|+||+|||||||||++||+|.+. .+.+.++|..+.
T Consensus 56 din~~~aw~~g~~G~gV~VaViDtGid~~Hpdl~~~--------------------------~~~~~~~~~~~~------ 103 (600)
T 2oxa_A 56 DLNLWWAHRTGVLGHGVNVAVVDDGLAIAHPDLADN--------------------------VRPGSKNVVTGS------ 103 (600)
T ss_dssp SCCCHHHHHTTCSCTTCEEEEESSCCCTTCTTTGGG--------------------------BCSCCBCTTTCS------
T ss_pred CcChHHHHhcCCCCCCcEEEEecCCcCCCCcchhhc--------------------------cccCceeccCCC------
Confidence 466788999999999999999999999999999743 011223333321
Q ss_pred CCCCCCCCCCCCC-CCCCchhhHHhhccCCCCccCcccccCcceeeecCCCeEEEEEeeccCCCCh--HHHHHHHHHHHh
Q 004261 199 FSKKPNEPESPRD-YDGHGTHTASTAAGVPVANASLLGYASGVARGMATHARVATYKVCWKTGCFG--SDILAGIDRAIQ 275 (765)
Q Consensus 199 ~~~~~~~~~~~~d-~~gHGThVAgi~Ag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g~~~--~~i~~ai~~a~~ 275 (765)
....|.| .+||||||||||||. .++.. +.||||+|+|+.+|+++..+... ..+++....+..
T Consensus 104 ------~d~~p~d~~~gHGT~vAGiiaa~-~n~~g--------~~GVAp~A~l~~vkv~~~~~~~~~~~~~~~~~~~a~~ 168 (600)
T 2oxa_A 104 ------DDPTPTDPDTGHGTSVSGIIAAV-DNAIG--------TKGIAPRAQLQGFNLLDDNSQQLQKDWLYALGDSNAS 168 (600)
T ss_dssp ------SCCCCCSTTCCHHHHHHHHHHCC-SSSSS--------CCCSSTTCEEEEECTTSTTCCCCHHHHHHHTTTSHHH
T ss_pred ------CCCCCCCCCCCCccHHHHHhhcc-cCCCc--------ceEEccCCceEEEeeecCcccchHHHHHHHHhhhhcc
Confidence 1122344 789999999999998 33322 37999999999999998776332 334444444777
Q ss_pred CCCcEEEeccCCCCC-CCcc----cHHHHHHHH---HHhCCcEEEEecCCCCCCCC----------------------Cc
Q 004261 276 DGVDVLSMSLGGGSA-PYYR----DTIAVGAFA---AMEKGIVVSCSAGNSGPTKA----------------------SL 325 (765)
Q Consensus 276 ~g~dVIn~SlG~~~~-~~~~----~~~~~a~~~---a~~~Gi~vV~AAGN~G~~~~----------------------~~ 325 (765)
++++|||||||.... .... ..+..++.. +.++|++||+||||+|.... ..
T Consensus 169 ~~~~Vin~S~G~~~~~~~~~~~~~~~~~~~~~~~~~a~~~GilvV~AAGN~g~~~~~~~~~~~Pa~~~~~~p~~~~n~~~ 248 (600)
T 2oxa_A 169 RDNRVFNHSYRMSVVDPRSANSLDQSQLDRLFEQQTLKAQGAAYIKAAGNGFNKIAAGGYVLNRTGNGPKLPFENSNLDP 248 (600)
T ss_dssp HTCSEEEECCCCCCSSCCCSCSHHHHHHHHHHHHHHHSTTCCEEEEECCSCSSEEEETTEEEEEESCSSCCCSSBTTSSG
T ss_pred cCCeEEEEeccCCCCCccccCchhHHHHHHHHHHHHhccCCcEEEEecCCCCccCCCCcceecCccccccccccccccCC
Confidence 899999999998642 1111 222222222 45789999999999986421 11
Q ss_pred ccCCCceEEEccCCCCCceeEEEEeCCceeEEeEeeccCCCCCCeeEEEEEecCCCCCCCCCCCCCCCCCCCcccCeEEE
Q 004261 326 ANVAPWILTVGAGTLDRDFPAYVFLGNKKKATGVSLYSGNGMGNKPVSLVYNKGSNGSSSSNLCLPGSLQPELVRGKVVI 405 (765)
Q Consensus 326 ~~~ap~vitVgAst~d~~~~~~~~~~~g~~~~~~s~~~~~~~~~~~~~~v~~~~~~~~~~~~~c~~~~~~~~~~~gkivl 405 (765)
.+.++|+|+|||.+
T Consensus 249 ~~~s~~vItVgA~~------------------------------------------------------------------ 262 (600)
T 2oxa_A 249 SNSNFWNLVVSALN------------------------------------------------------------------ 262 (600)
T ss_dssp GGGSSSEEEEEEEC------------------------------------------------------------------
T ss_pred cccCceeEEEeccc------------------------------------------------------------------
Confidence 12233455555421
Q ss_pred EeCCCcchhhhhHHHhhcCccEEEEeecCCCCccccccCccccEEEEchhhHHHHHHHHhcCCCceEEEEecceEecccC
Q 004261 406 CDRGINARVEKGAVVRDAGGVGMILANTAASGEELVADSHLLPAVAIGRKMGDIVREYAKTVPNPTALLTFGGTVLNVRP 485 (765)
Q Consensus 406 ~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~v~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~ 485 (765)
.
T Consensus 263 -------------------------------------------------------------------------------~ 263 (600)
T 2oxa_A 263 -------------------------------------------------------------------------------A 263 (600)
T ss_dssp -------------------------------------------------------------------------------T
T ss_pred -------------------------------------------------------------------------------C
Confidence 1
Q ss_pred CCeeeeccCCCCCCCCCCCcCCceeecCCcEEeeecC-------CC--CCC------------CcccCccceeeEEeccc
Q 004261 486 SPVVAAFSSRGPNMVTPQILKPDVIGPGVNILAAWTE-------AS--GPT------------ELEKDTRRTKFNIMSGT 544 (765)
Q Consensus 486 ~~~~a~fSS~Gp~~~~~~~lKPDi~APG~~I~sa~~~-------~~--~~~------------~~~~~~~~~~y~~~sGT 544 (765)
.+.++.||++||+. ||+|||++|.+..+. +. +.. ....+.....|..++||
T Consensus 264 ~g~~a~fS~~G~~v--------dv~APG~~i~~~~p~i~ttd~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~sGT 335 (600)
T 2oxa_A 264 DGVRSSYSSVGSNI--------FLSATGGEYGTDTPAMVTTDLPGCDMGYNRTDDPSTNRLHGNSQLDASCDYNGVMNGT 335 (600)
T ss_dssp TSSBCTTCCBCTTE--------EEEEECCSCSSSSCCEEEECCSSTTSSSSSTTSCCSSTTTTCTTTCTTCCEEEEECSH
T ss_pred CCCcCCcCCCCCCe--------EEEeccCCCCcCCCceEeccccccccccccccccccccccccccccCCcccccccccc
Confidence 24678999999986 999999996443221 10 000 00011122358999999
Q ss_pred cchhhhhhhHHHHHHhhCCCCCHHHHHHHHHhcceeccCCCCCCC-------------------CCCCCCCCCCCcCCCc
Q 004261 545 SMSCPHLSGVAALLKAAHPDWSPSAIKSALMTTAYVVDNTKSPLH-------------------DAADGRLSTPWAHGSG 605 (765)
Q Consensus 545 SmAaP~VAG~aALl~~~~P~~sp~~ik~~L~~TA~~~~~~~~~~~-------------------~~~~~~~~~~~~~G~G 605 (765)
|||||||||++|||+|++|+|+|++||++|++||++++..+.++. ..........+.||||
T Consensus 336 S~AaP~VAGvaALl~s~~P~lt~~~vk~~L~~tA~~~~~~~~~~~~~~~~~~G~~~~~~~~~~w~~n~~g~~~~~~~G~G 415 (600)
T 2oxa_A 336 SSATPSTSGAMALLMSAYPDLSVRDLRDLLARSATRVDAKHQPVMVSYTSSTGKVRDVKGLEGWERNAAGMWFSPTYGFG 415 (600)
T ss_dssp HHHHHHHHHHHHHHHHHSTTSCHHHHHHHHHHHCBCCSTTCCCEEEEEECTTSCEEEEEEECCSEECTTSCEEBTTTBTC
T ss_pred hHHhHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccCCcccccccccccccccccccccccccccccCCCccccccCCCc
Confidence 999999999999999999999999999999999999865432211 0001122245789999
Q ss_pred ccCccccCCCCc
Q 004261 606 HVNPQKAISPGL 617 (765)
Q Consensus 606 ~vd~~~Al~~gl 617 (765)
+||+.+|++...
T Consensus 416 ~vda~~Av~~A~ 427 (600)
T 2oxa_A 416 LIDVNKALELAA 427 (600)
T ss_dssp BCCHHHHHHHHT
T ss_pred hhhHHHHHHHHH
Confidence 999999998544
No 30
>1p8j_A Furin precursor; prohormone convertase, SPC1, PACE, P-domain; HET: DKA AR7 NAG FUL BMA MAN GAL FUC; 2.60A {Mus musculus} SCOP: b.18.1.20 c.41.1.1
Probab=100.00 E-value=1.1e-46 Score=425.70 Aligned_cols=304 Identities=14% Similarity=0.099 Sum_probs=221.8
Q ss_pred cccccccC-CCCCCCccccccCCCCCCcEEEEeccCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCceeEeeee
Q 004261 109 QFLGISSD-FGLSAGYSKLDFDKASLDVIIGVLDTGVWPESKSFDDSAMPEVPTKWRGQCESGPDFSPKLCNKKLIGARF 187 (765)
Q Consensus 109 ~~~g~~~~-~~~~~~~~~~~~~~~G~gV~VaVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~~~~~~~n~kiig~~~ 187 (765)
..|++... ...++...+|..+++|+||+|||||||||++||+|.+.- .. ...++
T Consensus 13 ~qW~l~~~~~~~i~~~~aw~~g~~G~gv~VaViDtGvd~~Hpdl~~~~------------~~-------------~~~~d 67 (471)
T 1p8j_A 13 QQWYLSGVTQRDLNVKEAWAQGFTGHGIVVSILDDGIEKNHPDLAGNY------------DP-------------GASFD 67 (471)
T ss_dssp GCTTTSCTTSCSCCCHHHHHTTCSCTTCEEEEEEBCCCTTCTTTGGGB------------CG-------------GGCEE
T ss_pred hCcCCCCCCccCCChHHHHhcCCCCCCCEEEEEeCCcCCCChhHhhcc------------Cc-------------cCccc
Confidence 44666652 224667889999999999999999999999999997430 00 01223
Q ss_pred ccccccccCCCCCCCCCCCCCCCCCCCCchhhHHhhccCCCCccCcccccCcceeeecCCCeEEEEEeeccCCCChHHHH
Q 004261 188 FSKGYHMAGGSFSKKPNEPESPRDYDGHGTHTASTAAGVPVANASLLGYASGVARGMATHARVATYKVCWKTGCFGSDIL 267 (765)
Q Consensus 188 ~~~g~~~~~~~~~~~~~~~~~~~d~~gHGThVAgi~Ag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g~~~~~i~ 267 (765)
|.++. .+ +.+...+.|.+||||||||||||...++.. +.||||+|+|+.+|+++ +..++++
T Consensus 68 ~~~~~------~~--p~~~~~~~d~~gHGT~vAGiiaa~~~n~~g--------~~GvAp~a~i~~~rv~~---g~~~~~~ 128 (471)
T 1p8j_A 68 VNDQD------PD--PQPRYTQMNDNRHGTRCAGEVAAVANNGVC--------GVGVAYNARIGGVRMLD---GEVTDAV 128 (471)
T ss_dssp TTTTB------SC--CCCCCCTTCTTCHHHHHHHHHHCCSSSSSS--------CCCTTTTSEEEEEECSS---SCCCHHH
T ss_pred ccCCC------CC--CCCccCCCCCCCcHHHHHHHHHeeccCCCC--------CEEECCCCeEEEEEccC---CchhHHH
Confidence 33211 00 111124568899999999999997654332 37999999999999985 4567899
Q ss_pred HHHHHHHh-CCCcEEEeccCCCCCC----CcccHHHHHHHHHH-----hCCcEEEEecCCCCCCCCC----cccCCCceE
Q 004261 268 AGIDRAIQ-DGVDVLSMSLGGGSAP----YYRDTIAVGAFAAM-----EKGIVVSCSAGNSGPTKAS----LANVAPWIL 333 (765)
Q Consensus 268 ~ai~~a~~-~g~dVIn~SlG~~~~~----~~~~~~~~a~~~a~-----~~Gi~vV~AAGN~G~~~~~----~~~~ap~vi 333 (765)
+|++++++ ++++|||||||..... .....+..++.++. .+|++||+||||+|..... ....++++|
T Consensus 129 ~ai~~a~~~~~~~Vin~S~G~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~GvlvV~AAGN~g~~~~~~~~~~~~~~~~vI 208 (471)
T 1p8j_A 129 EARSLGLNPNHIHIYSASWGPEDDGKTVDGPARLAEEAFFRGVSQGRGGLGSIFVWASGNGGREHDSCNCDGYTNSIYTL 208 (471)
T ss_dssp HHHHHTSCTTTCCEEEECCBSCCSSSCCBCCCHHHHHHHHHHHHHHHHHTCCEEEEECCSCGGGTCBGGGBTTTTSTTEE
T ss_pred HHHHhhhccCCCeEEEeccCcCCCCCcccCcHHHHHHHHHHHHHhhccCCCeEEEEeCCCCCCCCCCcCcCcccCCCceE
Confidence 99999999 9999999999985321 11223444444444 3799999999999975321 123458999
Q ss_pred EEccCCCCCceeEEEEeCCceeEEeEeeccCCCCCCeeEEEEEecCCCCCCCCCCCCCCCCCCCcccCeEEEEeCCCcch
Q 004261 334 TVGAGTLDRDFPAYVFLGNKKKATGVSLYSGNGMGNKPVSLVYNKGSNGSSSSNLCLPGSLQPELVRGKVVICDRGINAR 413 (765)
Q Consensus 334 tVgAst~d~~~~~~~~~~~g~~~~~~s~~~~~~~~~~~~~~v~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~ 413 (765)
+|||.+.
T Consensus 209 tVgA~~~------------------------------------------------------------------------- 215 (471)
T 1p8j_A 209 SISSATQ------------------------------------------------------------------------- 215 (471)
T ss_dssp EEEEECT-------------------------------------------------------------------------
T ss_pred EEecccC-------------------------------------------------------------------------
Confidence 9998321
Q ss_pred hhhhHHHhhcCccEEEEeecCCCCccccccCccccEEEEchhhHHHHHHHHhcCCCceEEEEecceEecccCCCeeeecc
Q 004261 414 VEKGAVVRDAGGVGMILANTAASGEELVADSHLLPAVAIGRKMGDIVREYAKTVPNPTALLTFGGTVLNVRPSPVVAAFS 493 (765)
Q Consensus 414 ~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~v~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fS 493 (765)
.+.++.||
T Consensus 216 ------------------------------------------------------------------------~g~~a~~S 223 (471)
T 1p8j_A 216 ------------------------------------------------------------------------FGNVPWYS 223 (471)
T ss_dssp ------------------------------------------------------------------------TSCCCTTC
T ss_pred ------------------------------------------------------------------------CCCccccc
Confidence 12578899
Q ss_pred CCCCCCCCCCCcCCceeecCCcEEeeecCCCCCCCcccCccceeeEEeccccchhhhhhhHHHHHHhhCCCCCHHHHHHH
Q 004261 494 SRGPNMVTPQILKPDVIGPGVNILAAWTEASGPTELEKDTRRTKFNIMSGTSMSCPHLSGVAALLKAAHPDWSPSAIKSA 573 (765)
Q Consensus 494 S~Gp~~~~~~~lKPDi~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~sp~~ik~~ 573 (765)
++||... ...+|...+||.+|+++...+ ..|..++|||||||||||++|||+|++|+|++++||++
T Consensus 224 ~~g~~~~--~~~~~~~~~~g~~i~st~~~~------------~~~~~~sGTS~AaP~VAG~aALl~~~~p~lt~~~v~~~ 289 (471)
T 1p8j_A 224 EACSSTL--ATTYSSGNQNEKQIVTTDLRQ------------KCTESHTGTSASAPLAAGIIALTLEANKNLTWRDMQHL 289 (471)
T ss_dssp CBCTTCC--EEEECCCSTTSCCEEEEETTT------------EEEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHH
T ss_pred CCCCcce--EEeCCCCCCCCCCEEEeeCCC------------CccccCCCcccccchhhhHHHHHHhhCCCCCHHHHHHH
Confidence 9999875 344556666678999987643 26899999999999999999999999999999999999
Q ss_pred HHhcceeccCCCCCCCCCCCCCCCCCCcCCCcccCccccCCCC
Q 004261 574 LMTTAYVVDNTKSPLHDAADGRLSTPWAHGSGHVNPQKAISPG 616 (765)
Q Consensus 574 L~~TA~~~~~~~~~~~~~~~~~~~~~~~~G~G~vd~~~Al~~g 616 (765)
|++||++++.....+.... ........||||+||+.+|++..
T Consensus 290 L~~tA~~~~~~~~~~~~n~-~g~~~~~~~G~G~vda~~Av~~a 331 (471)
T 1p8j_A 290 VVQTSKPAHLNADDWATNG-VGRKVSHSYGYGLLDAGAMVALA 331 (471)
T ss_dssp HHHHCBCTTCCCSCCEECT-TSCEEBTTTBTCBCCHHHHHHHH
T ss_pred HHhcCccCCCCCCCceecC-CCcccCCCCCCEEEcHhHHHHHh
Confidence 9999998765432222211 11123468999999999999843
No 31
>2qtw_B Proprotein convertase subtilisin/kexin type 9; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_B 3bps_A 3gcw_A 3gcx_A 3p5b_A 3p5c_A 2pmw_B 3h42_B 2w2n_A 2w2m_A 2w2p_A 2w2q_A 2xtj_A 2w2o_A
Probab=100.00 E-value=1.8e-46 Score=418.94 Aligned_cols=293 Identities=20% Similarity=0.211 Sum_probs=208.4
Q ss_pred ccccccCCCCCCCccccccCCCCCCcEEEEeccCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCceeEeeeecc
Q 004261 110 FLGISSDFGLSAGYSKLDFDKASLDVIIGVLDTGVWPESKSFDDSAMPEVPTKWRGQCESGPDFSPKLCNKKLIGARFFS 189 (765)
Q Consensus 110 ~~g~~~~~~~~~~~~~~~~~~~G~gV~VaVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~~~~~~~n~kiig~~~~~ 189 (765)
.|+|+++.........|..+.+|+||+|+|||||||++||+|.+. .+...+.+.
T Consensus 3 ~WgL~rI~~~~~~~~aw~~~~tG~GV~VaVIDTGId~~HpdL~gr--------------------------~~~~~~~~v 56 (546)
T 2qtw_B 3 PWNLERITPPRYRADEYQPPDGGSLVEVYLLDTSIQSDHREIEGR--------------------------VMVTDFENV 56 (546)
T ss_dssp CHHHHHTSCSSCC--------CCTTSEEEEEESCCCTTSTTTTTT--------------------------EEEEEEECC
T ss_pred CCChhhcCCCcccchhcccCCCCCCcEEEEECCCCCCCChHHccc--------------------------ccccCcccc
Confidence 377776654222233788899999999999999999999999753 111111111
Q ss_pred ccccccCCCCCCCCCCCCCCCCCCCCchhhHHhhccCCCCccCcccccCcceeeecCCCeEEEEEeeccCC-CChHHHHH
Q 004261 190 KGYHMAGGSFSKKPNEPESPRDYDGHGTHTASTAAGVPVANASLLGYASGVARGMATHARVATYKVCWKTG-CFGSDILA 268 (765)
Q Consensus 190 ~g~~~~~~~~~~~~~~~~~~~d~~gHGThVAgi~Ag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ 268 (765)
.. .++. .....+.|.+||||||||||+|+. .||||+|+|+.+|++++.| +..+++++
T Consensus 57 ~~---~dg~-----~f~~~~~D~~GHGThVAGIIag~~--------------~GVAP~A~L~~vkVl~~~G~g~~s~ii~ 114 (546)
T 2qtw_B 57 PE---EDGT-----RFHRQASKCDSHGTHLAGVVSGRD--------------AGVAKGASMRSLRVLNCQGKGTVSGTLI 114 (546)
T ss_dssp CC---CC------------CTTTTHHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTSEEEHHHHHH
T ss_pred cC---CCCc-----cccCCCCCCCChHHHHHHHHhccC--------------CCcCCCCEEEEEEEECCCCCcCHHHHHH
Confidence 10 0000 001245688999999999999873 5999999999999998877 78889999
Q ss_pred HHHHHHhC------CCcEEEeccCCCCCCCcccHHHHHHHHHHhCCcEEEEecCCCCCCCC-CcccCCCceEEEccCCCC
Q 004261 269 GIDRAIQD------GVDVLSMSLGGGSAPYYRDTIAVGAFAAMEKGIVVSCSAGNSGPTKA-SLANVAPWILTVGAGTLD 341 (765)
Q Consensus 269 ai~~a~~~------g~dVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~-~~~~~ap~vitVgAst~d 341 (765)
||+|++++ +++|||||||+.. ...+..++.++.++|++||+||||+|.... .+++..|++|+|||++.+
T Consensus 115 ai~~a~~~~~~~~~g~~VINmSlGg~~----s~~l~~Ai~~A~~~GvlvVaAAGN~g~d~~~~sPAs~~~VItVGA~d~~ 190 (546)
T 2qtw_B 115 GLEFIRKSQLVQPVGPLVVLLPLAGGY----SRVLNAACQRLARAGVVLVTAAGNFRDDACLYSPASAPEVITVGATNAQ 190 (546)
T ss_dssp HHHHHHHHHHHSCCSCEEEEECEEEEC----CHHHHHHHHHHHHTTCEEEEECCSBSSBGGGEETTTCTTSEEEEEECTT
T ss_pred HHHHHHHhhhhccCCCeEEEecCCCCC----cHHHHHHHHHHHhCCCEEEEECCCCCCCCCccCcccCCCEEEEEEecCC
Confidence 99999984 8999999999752 356777788899999999999999997653 457889999999995422
Q ss_pred CceeEEEEeCCceeEEeEeeccCCCCCCeeEEEEEecCCCCCCCCCCCCCCCCCCCcccCeEEEEeCCCcchhhhhHHHh
Q 004261 342 RDFPAYVFLGNKKKATGVSLYSGNGMGNKPVSLVYNKGSNGSSSSNLCLPGSLQPELVRGKVVICDRGINARVEKGAVVR 421 (765)
Q Consensus 342 ~~~~~~~~~~~g~~~~~~s~~~~~~~~~~~~~~v~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~ 421 (765)
...
T Consensus 191 g~~----------------------------------------------------------------------------- 193 (546)
T 2qtw_B 191 DQP----------------------------------------------------------------------------- 193 (546)
T ss_dssp SCB-----------------------------------------------------------------------------
T ss_pred CCc-----------------------------------------------------------------------------
Confidence 110
Q ss_pred hcCccEEEEeecCCCCccccccCccccEEEEchhhHHHHHHHHhcCCCceEEEEecceEecccCCCeeeeccCCCCCCCC
Q 004261 422 DAGGVGMILANTAASGEELVADSHLLPAVAIGRKMGDIVREYAKTVPNPTALLTFGGTVLNVRPSPVVAAFSSRGPNMVT 501 (765)
Q Consensus 422 ~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~v~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~ 501 (765)
...-..||++||
T Consensus 194 ----------------------------------------------------------------a~~s~~fSn~G~---- 205 (546)
T 2qtw_B 194 ----------------------------------------------------------------VTLGTLGTNFGR---- 205 (546)
T ss_dssp ----------------------------------------------------------------CEETTEECCBST----
T ss_pred ----------------------------------------------------------------ccccCCcCCCCC----
Confidence 000013899997
Q ss_pred CCCcCCceeecCCcEEeeecCCCCCCCcccCccceeeEEeccccchhhhhhhHHHHHHhhCCCCCHHHHHHHHHhcceec
Q 004261 502 PQILKPDVIGPGVNILAAWTEASGPTELEKDTRRTKFNIMSGTSMSCPHLSGVAALLKAAHPDWSPSAIKSALMTTAYVV 581 (765)
Q Consensus 502 ~~~lKPDi~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~sp~~ik~~L~~TA~~~ 581 (765)
||||+|||++|+++++.... .|..++|||||||||||++|||+|++|+|+|+|||++|++||.+.
T Consensus 206 ----~vDI~APG~~I~St~~~~~~-----------~y~~~SGTSmAAP~VAG~aALlls~~P~ltp~qVr~~L~~tAt~~ 270 (546)
T 2qtw_B 206 ----CVDLFAPGEDIIGASSDCST-----------CFVSQSGTSQAAAHVAGIAAMMLSAEPELTLAELRQRLIHFSAKD 270 (546)
T ss_dssp ----TCCEEEECSSEEEECTTSTT-----------CEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTSEES
T ss_pred ----cceEEecCccEEeeccCCCC-----------cEeeeCcCcHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhcccc
Confidence 45999999999999886432 799999999999999999999999999999999999999999864
Q ss_pred cCCCCCCC--------CCCCCCCCCCCcCCCcc--cCccccCC
Q 004261 582 DNTKSPLH--------DAADGRLSTPWAHGSGH--VNPQKAIS 614 (765)
Q Consensus 582 ~~~~~~~~--------~~~~~~~~~~~~~G~G~--vd~~~Al~ 614 (765)
......+. +.-...+...+.+|+|+ .++..+..
T Consensus 271 ~i~~~~~p~~~~~~tpN~l~~~~~~~~~~G~~l~~~~~w~a~s 313 (546)
T 2qtw_B 271 VINEAWFPEDQRVLTPNLVAALPPSTHGAGWQLFCRTVWSAHS 313 (546)
T ss_dssp CSCGGGSCHHHHTTSCCEECCCCCTTCC--CCCEEEEEECCCC
T ss_pred ccCCccCccccCCCCccchhccCCcccccCCCcchhchhccCC
Confidence 32110000 00011222456788888 77777765
No 32
>2id4_A Kexin; KEX2, kexin, furin, proprotein, prohormone, convertase, SUBT like protease, serine protease; HET: NDG; 1.90A {Saccharomyces cerevisiae} SCOP: b.18.1.20 c.41.1.1 PDB: 1r64_A* 1ot5_A*
Probab=100.00 E-value=2.2e-46 Score=425.80 Aligned_cols=296 Identities=18% Similarity=0.191 Sum_probs=218.8
Q ss_pred cccccccCC---CCCCCccccccCCCCCCcEEEEeccCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCceeEee
Q 004261 109 QFLGISSDF---GLSAGYSKLDFDKASLDVIIGVLDTGVWPESKSFDDSAMPEVPTKWRGQCESGPDFSPKLCNKKLIGA 185 (765)
Q Consensus 109 ~~~g~~~~~---~~~~~~~~~~~~~~G~gV~VaVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~~~~~~~n~kiig~ 185 (765)
..|++.... ..++...+|..+++|+||+|||||||||++||+|.+.- +. .+.
T Consensus 27 ~qW~l~~~~~~g~~i~~~~aw~~g~tG~gv~VaViDtGvd~~Hpdl~~~~-------~~------------------~~~ 81 (503)
T 2id4_A 27 RQWHLVNPSFPGSDINVLDLWYNNITGAGVVAAIVDDGLDYENEDLKDNF-------CA------------------EGS 81 (503)
T ss_dssp GCTTTSCSSSTTCSCCCHHHHHTTCSCTTCEEEEEESCCCTTSTTTTTTB-------CG------------------GGC
T ss_pred hccCcCCCCCcccccChHHHHhcCCCCCCeEEEEEeCCCCCCChhHhhcc-------cc------------------cCc
Confidence 345555322 25677889999999999999999999999999997531 00 012
Q ss_pred eeccccccccCCCCCCCCCCCCCCCCCCCCchhhHHhhccCCCCccCcccccCcceeeecCCCeEEEEEeeccCCCChHH
Q 004261 186 RFFSKGYHMAGGSFSKKPNEPESPRDYDGHGTHTASTAAGVPVANASLLGYASGVARGMATHARVATYKVCWKTGCFGSD 265 (765)
Q Consensus 186 ~~~~~g~~~~~~~~~~~~~~~~~~~d~~gHGThVAgi~Ag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g~~~~~ 265 (765)
++|.++ . .++....|.+||||||||||||...++.. +.||||+|+|+.+|+++.. +...+
T Consensus 82 ~d~~~~------~-----~~~~p~~d~~gHGT~vAGiiaa~~~n~~~--------~~GvAp~a~i~~~rv~~~~-~~~~~ 141 (503)
T 2id4_A 82 WDFNDN------T-----NLPKPRLSDDYHGTRCAGEIAAKKGNNFC--------GVGVGYNAKISGIRILSGD-ITTED 141 (503)
T ss_dssp EETTTT------B-----SCCCCCSTTTTHHHHHHHHHHCCSSSSSS--------CCCTTTTSEEEEEECTTSC-CCHHH
T ss_pred ccCCCC------C-----CCCCCCCCCCChHHHHHHHHHhccCCCCC--------cEEECCCCEEEEEEeeCCC-CChHH
Confidence 333331 0 01122357889999999999998644322 2799999999999999643 67888
Q ss_pred HHHHHHHHHhCCCcEEEeccCCCCCC----CcccHHHHHHHHHH-----hCCcEEEEecCCCCCCCC--Ccc--cCCCce
Q 004261 266 ILAGIDRAIQDGVDVLSMSLGGGSAP----YYRDTIAVGAFAAM-----EKGIVVSCSAGNSGPTKA--SLA--NVAPWI 332 (765)
Q Consensus 266 i~~ai~~a~~~g~dVIn~SlG~~~~~----~~~~~~~~a~~~a~-----~~Gi~vV~AAGN~G~~~~--~~~--~~ap~v 332 (765)
+++||+|+++++ +|||||||..... .....+..++.++. .+|++||+||||+|.... .++ ..++++
T Consensus 142 ~~~ai~~a~~~~-~Iin~S~G~~~~~~~~~~~~~~~~~a~~~a~~~~r~~~GvlvV~AAGN~g~~~~~~~~~~~~~~~~v 220 (503)
T 2id4_A 142 EAASLIYGLDVN-DIYSCSWGPADDGRHLQGPSDLVKKALVKGVTEGRDSKGAIYVFASGNGGTRGDNCNYDGYTNSIYS 220 (503)
T ss_dssp HHHHTTTTTTTC-SEEEECEESCCSSSCCBCCCHHHHHHHHHHHHHHHHHTCCEEEEECCSCGGGTCCGGGBTTTTCTTE
T ss_pred HHHHHHhHhhcC-CEEEeCCCcCCCCccccCchHHHHHHHHHHHHhcccCCCcEEEEecCCCCCcCCCCCCCcccCCCCE
Confidence 999999999998 9999999975321 11234555555665 479999999999996533 222 256789
Q ss_pred EEEccCCCCCceeEEEEeCCceeEEeEeeccCCCCCCeeEEEEEecCCCCCCCCCCCCCCCCCCCcccCeEEEEeCCCcc
Q 004261 333 LTVGAGTLDRDFPAYVFLGNKKKATGVSLYSGNGMGNKPVSLVYNKGSNGSSSSNLCLPGSLQPELVRGKVVICDRGINA 412 (765)
Q Consensus 333 itVgAst~d~~~~~~~~~~~g~~~~~~s~~~~~~~~~~~~~~v~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~ 412 (765)
|+|||.+.
T Consensus 221 I~VgA~~~------------------------------------------------------------------------ 228 (503)
T 2id4_A 221 ITIGAIDH------------------------------------------------------------------------ 228 (503)
T ss_dssp EEEEEECT------------------------------------------------------------------------
T ss_pred EEEEeeCC------------------------------------------------------------------------
Confidence 99998321
Q ss_pred hhhhhHHHhhcCccEEEEeecCCCCccccccCccccEEEEchhhHHHHHHHHhcCCCceEEEEecceEecccCCCeeeec
Q 004261 413 RVEKGAVVRDAGGVGMILANTAASGEELVADSHLLPAVAIGRKMGDIVREYAKTVPNPTALLTFGGTVLNVRPSPVVAAF 492 (765)
Q Consensus 413 ~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~v~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~f 492 (765)
.+.++.|
T Consensus 229 -------------------------------------------------------------------------~~~~a~~ 235 (503)
T 2id4_A 229 -------------------------------------------------------------------------KDLHPPY 235 (503)
T ss_dssp -------------------------------------------------------------------------TSCCCTT
T ss_pred -------------------------------------------------------------------------CCCcCCc
Confidence 1256889
Q ss_pred cCCCCCCCCCCCcCCceee----cCCcEEeeecCCCCCCCcccCccceeeEEeccccchhhhhhhHHHHHHhhCCCCCHH
Q 004261 493 SSRGPNMVTPQILKPDVIG----PGVNILAAWTEASGPTELEKDTRRTKFNIMSGTSMSCPHLSGVAALLKAAHPDWSPS 568 (765)
Q Consensus 493 SS~Gp~~~~~~~lKPDi~A----PG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~sp~ 568 (765)
|++||.. |++| ||.+|+++...+ ..|..++|||||||||||++|||+|++|+|+++
T Consensus 236 S~~g~~~--------~~~a~~~gpG~~I~st~~~~------------~~~~~~sGTS~AaP~VAG~aALl~~~~p~lt~~ 295 (503)
T 2id4_A 236 SEGCSAV--------MAVTYSSGSGEYIHSSDING------------RCSNSHGGTSAAAPLAAGVYTLLLEANPNLTWR 295 (503)
T ss_dssp CCCCTTE--------EEEEECSBTTBCEEEECSTT------------CEEEEECSHHHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred CCCCCcc--------eEeecCCCCCCceEeecCCC------------CceecCCCccccchhhhHHHHHHHHhCCCCCHH
Confidence 9999986 7777 899999985432 179999999999999999999999999999999
Q ss_pred HHHHHHHhcceeccCC-CCCCCCCCCCCCCCCCcCCCcccCccccCCCC
Q 004261 569 AIKSALMTTAYVVDNT-KSPLHDAADGRLSTPWAHGSGHVNPQKAISPG 616 (765)
Q Consensus 569 ~ik~~L~~TA~~~~~~-~~~~~~~~~~~~~~~~~~G~G~vd~~~Al~~g 616 (765)
+||++|++||+++... ...+.... ........||||+||+.+|++..
T Consensus 296 ~v~~~L~~tA~~~~~~~~~~~~~~~-~g~~~~~~~G~G~vda~~Av~~a 343 (503)
T 2id4_A 296 DVQYLSILSAVGLEKNADGDWRDSA-MGKKYSHRYGFGKIDAHKLIEMS 343 (503)
T ss_dssp HHHHHHHHHCBCCTTCGGGCCEECS-SSSEEBTTTBTCBCCHHHHHHHH
T ss_pred HHHHHHHhccccCCCCcCCCceecC-CCCccCcccCCcEecHHHHHHHH
Confidence 9999999999987643 11111111 11223458999999999999843
No 33
>3f7m_A Alkaline serine protease VER112; verticillium psalliotae, cuticle- degrading protease, nematodes, hydrolase, secreted, zymogen; 1.60A {Lecanicillium psalliotae} SCOP: c.41.1.1 PDB: 3f7o_A
Probab=100.00 E-value=6.8e-46 Score=391.24 Aligned_cols=243 Identities=30% Similarity=0.412 Sum_probs=200.9
Q ss_pred ccccccCCCC--CCCccccccCCCCCCcEEEEeccCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCceeEeeee
Q 004261 110 FLGISSDFGL--SAGYSKLDFDKASLDVIIGVLDTGVWPESKSFDDSAMPEVPTKWRGQCESGPDFSPKLCNKKLIGARF 187 (765)
Q Consensus 110 ~~g~~~~~~~--~~~~~~~~~~~~G~gV~VaVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~~~~~~~n~kiig~~~ 187 (765)
.|+++++... ......|... +|+||+|||||||||++||+|.+ ++...++
T Consensus 8 ~W~l~~i~~~~~~~~~~~~~~~-~G~gv~VaViDtGvd~~h~~l~~---------------------------~~~~~~~ 59 (279)
T 3f7m_A 8 TWGLTRISHRARGSTAYAYDTS-AGAGACVYVIDTGVEDTHPDFEG---------------------------RAKQIKS 59 (279)
T ss_dssp CHHHHHHTCSSSCCCSEEECTT-TTTTEEEEEEESCCCTTCGGGTT---------------------------CEEEEEE
T ss_pred CCCHhhcCCCCCCCcceeecCC-CCCCCEEEEEcCCCCCCChhhcc---------------------------ccccccC
Confidence 3666655431 1223466665 89999999999999999999974 2444444
Q ss_pred ccccccccCCCCCCCCCCCCCCCCCCCCchhhHHhhccCCCCccCcccccCcceeeecCCCeEEEEEeeccCC-CChHHH
Q 004261 188 FSKGYHMAGGSFSKKPNEPESPRDYDGHGTHTASTAAGVPVANASLLGYASGVARGMATHARVATYKVCWKTG-CFGSDI 266 (765)
Q Consensus 188 ~~~g~~~~~~~~~~~~~~~~~~~d~~gHGThVAgi~Ag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i 266 (765)
|.. ...|.+||||||||||+|+. .||||+|+|+.+|+++..+ +..+++
T Consensus 60 ~~~-----------------~~~d~~gHGT~vAgii~~~~--------------~GvAp~a~l~~~~v~~~~~~~~~~~~ 108 (279)
T 3f7m_A 60 YAS-----------------TARDGHGHGTHCAGTIGSKT--------------WGVAKKVSIFGVKVLDDSGSGSLSNI 108 (279)
T ss_dssp CSS-----------------SSSCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTSCCCHHHH
T ss_pred CCC-----------------CCCCCCCcHHHHHHHHhcCc--------------cccCCCCEEEEEEeeCCCCCcCHHHH
Confidence 443 12378899999999999862 6999999999999998876 888999
Q ss_pred HHHHHHHHhCC-------CcEEEeccCCCCCCCcccHHHHHHHHHHhCCcEEEEecCCCCCCCCC-cccCCCceEEEccC
Q 004261 267 LAGIDRAIQDG-------VDVLSMSLGGGSAPYYRDTIAVGAFAAMEKGIVVSCSAGNSGPTKAS-LANVAPWILTVGAG 338 (765)
Q Consensus 267 ~~ai~~a~~~g-------~dVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~-~~~~ap~vitVgAs 338 (765)
++||+|+++++ ++|||||||.. ..+.+..++.++.++|++||+||||+|..... .++..+++|+|||.
T Consensus 109 ~~ai~~~~~~~~~~~~~~~~Vin~S~g~~----~~~~~~~a~~~a~~~gv~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~ 184 (279)
T 3f7m_A 109 IAGMDFVASDRQSRNCPRRTVASMSLGGG----YSAALNQAAARLQSSGVFVAVAAGNDNRDAANTSPASEPTVCTVGAT 184 (279)
T ss_dssp HHHHHHHHHHGGGSCCTTEEEEEECCCEE----CCHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEE
T ss_pred HHHHHHHHhccccccCCCCeEEEeCCCcC----ccHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCcCCCCCCCEEEEeec
Confidence 99999999876 89999999974 34567778889999999999999999976543 47788999999983
Q ss_pred CCCCceeEEEEeCCceeEEeEeeccCCCCCCeeEEEEEecCCCCCCCCCCCCCCCCCCCcccCeEEEEeCCCcchhhhhH
Q 004261 339 TLDRDFPAYVFLGNKKKATGVSLYSGNGMGNKPVSLVYNKGSNGSSSSNLCLPGSLQPELVRGKVVICDRGINARVEKGA 418 (765)
Q Consensus 339 t~d~~~~~~~~~~~g~~~~~~s~~~~~~~~~~~~~~v~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~ 418 (765)
+.
T Consensus 185 ~~------------------------------------------------------------------------------ 186 (279)
T 3f7m_A 185 DS------------------------------------------------------------------------------ 186 (279)
T ss_dssp CT------------------------------------------------------------------------------
T ss_pred CC------------------------------------------------------------------------------
Confidence 21
Q ss_pred HHhhcCccEEEEeecCCCCccccccCccccEEEEchhhHHHHHHHHhcCCCceEEEEecceEecccCCCeeeeccCCCCC
Q 004261 419 VVRDAGGVGMILANTAASGEELVADSHLLPAVAIGRKMGDIVREYAKTVPNPTALLTFGGTVLNVRPSPVVAAFSSRGPN 498 (765)
Q Consensus 419 ~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~v~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~ 498 (765)
.+.++.||++||.
T Consensus 187 -------------------------------------------------------------------~~~~~~~S~~g~~ 199 (279)
T 3f7m_A 187 -------------------------------------------------------------------NDVRSTFSNYGRV 199 (279)
T ss_dssp -------------------------------------------------------------------TSBBCTTCCBSTT
T ss_pred -------------------------------------------------------------------CCCCCCCCCCCCC
Confidence 1257889999995
Q ss_pred CCCCCCcCCceeecCCcEEeeecCCCCCCCcccCccceeeEEeccccchhhhhhhHHHHHHhhCCCCCHHHHHHHHHhcc
Q 004261 499 MVTPQILKPDVIGPGVNILAAWTEASGPTELEKDTRRTKFNIMSGTSMSCPHLSGVAALLKAAHPDWSPSAIKSALMTTA 578 (765)
Q Consensus 499 ~~~~~~lKPDi~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~sp~~ik~~L~~TA 578 (765)
. ||+|||++|+++++.+ .|..++|||||||+|||++|||+|++|+ ++++||++|++||
T Consensus 200 ~--------di~ApG~~i~s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~~~p~-t~~~v~~~L~~tA 257 (279)
T 3f7m_A 200 V--------DIFAPGTSITSTWIGG-------------RTNTISGTSMATPHIAGLAAYLFGLEGG-SAGAMCGRIQTLS 257 (279)
T ss_dssp C--------CEEEECSSEEEECGGG-------------CEEEECSHHHHHHHHHHHHHHHHHHTCC-CTTTHHHHHHHHS
T ss_pred C--------eEEECCCCeEeecCCC-------------CEEEeeEHHHHHHHHHHHHHHHHHhCCC-CHHHHHHHHHHhc
Confidence 4 9999999999998765 7899999999999999999999999999 9999999999999
Q ss_pred eecc
Q 004261 579 YVVD 582 (765)
Q Consensus 579 ~~~~ 582 (765)
++..
T Consensus 258 ~~~~ 261 (279)
T 3f7m_A 258 TKNV 261 (279)
T ss_dssp EESC
T ss_pred cccc
Confidence 9753
No 34
>3hjr_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria}
Probab=100.00 E-value=3.8e-43 Score=409.83 Aligned_cols=319 Identities=20% Similarity=0.206 Sum_probs=201.2
Q ss_pred CCCCccccccCCCCCCcEEEEeccCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCceeEeeeeccccccccCCC
Q 004261 119 LSAGYSKLDFDKASLDVIIGVLDTGVWPESKSFDDSAMPEVPTKWRGQCESGPDFSPKLCNKKLIGARFFSKGYHMAGGS 198 (765)
Q Consensus 119 ~~~~~~~~~~~~~G~gV~VaVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~~~~~~~n~kiig~~~~~~g~~~~~~~ 198 (765)
.+++..+|..+++|+||+|||||||||++||||.+. . ..+.++|.++.
T Consensus 56 Dinv~~aw~~g~tG~GV~VaViDtGid~~HpDL~~n------------~--------------~~~~~~~~~~~------ 103 (600)
T 3hjr_A 56 DLNLWWAHRTGVLGQGVNVAVVDDGLAIAHPDLADN------------V--------------RPGSKNVVTGS------ 103 (600)
T ss_dssp SCCCHHHHHHTCSCTTCEEEEESSCCCTTCTTTGGG------------B--------------CSCCBCTTTSS------
T ss_pred ccCHHHHHHcCCCCCCeEEEEEcCCCCCCChhHhhc------------c--------------ccCcceeecCC------
Confidence 467788999999999999999999999999999742 0 11222333221
Q ss_pred CCCCCCCCCCCCCCCCCchhhHHhhccCCCCccCcccccCcceeeecCCCeEEEEEeeccCC-CChHHHHHHH-HHHHhC
Q 004261 199 FSKKPNEPESPRDYDGHGTHTASTAAGVPVANASLLGYASGVARGMATHARVATYKVCWKTG-CFGSDILAGI-DRAIQD 276 (765)
Q Consensus 199 ~~~~~~~~~~~~d~~gHGThVAgi~Ag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai-~~a~~~ 276 (765)
.++....|.+||||||||||||.. ++ .| +.||||+|+|+.+|++++.+ +..++++.|+ +++..+
T Consensus 104 -----~dp~p~~~~~gHGThVAGiIAa~~-n~---~g-----~~GVAp~A~l~~~rvl~~~~~~~~~~~~~a~~~~~~~~ 169 (600)
T 3hjr_A 104 -----DDPTPTDPDTAHGTSVSGIIAAVD-NA---IG-----TKGIAPRAQLQGFNLLDDNSQQLQKDWLYALGDSNASR 169 (600)
T ss_dssp -----SCCCCCSTTCCHHHHHHHHHHCCS-SS---SS-----CCCSSTTCEEEEECTTSTTCCCCHHHHHHHTTSSHHHH
T ss_pred -----CCCCCCCCCCChHHHHHHHHhEeC-CC---CC-----cEEeCCCCEEEEEEeecCCCCccHHHHHHHhhhhhhhc
Confidence 112234467899999999999863 22 22 27999999999999998876 6777887766 677788
Q ss_pred CCcEEEeccCCCCC-CCccc-----HHHHHHHH--HHhCCcEEEEecCCCCCCCCCcccCCCceEEEccCCCCCceeEEE
Q 004261 277 GVDVLSMSLGGGSA-PYYRD-----TIAVGAFA--AMEKGIVVSCSAGNSGPTKASLANVAPWILTVGAGTLDRDFPAYV 348 (765)
Q Consensus 277 g~dVIn~SlG~~~~-~~~~~-----~~~~a~~~--a~~~Gi~vV~AAGN~G~~~~~~~~~ap~vitVgAst~d~~~~~~~ 348 (765)
+++|||+|||.... +...+ .+..++.. ...+|+++|+||||.+...... ... +.+
T Consensus 170 ~~~I~n~S~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~AaGNg~~~~~~~-----~~~-~~~----------- 232 (600)
T 3hjr_A 170 DNRVFNQSYGMSVVDPRSANSLDQSQLDRLFEQQTLKAQGAAYIKAAGNGFNKIAAG-----GYV-LNR----------- 232 (600)
T ss_dssp TCSEEEECCCCCCSSCCCSCSHHHHHHHHHHHHHHHSTTCCEEEEECCSCSSEEEET-----TEE-EEE-----------
T ss_pred CCCEEecccCccccCCccCCcchhhhHHHHHHHhhhccCCcEEEEeccCcccccccc-----ccc-ccc-----------
Confidence 99999999997521 11111 12222222 2368999999999976432100 000 000
Q ss_pred EeCCceeEEeEeeccCCCCCCeeEEEEEecCCCCCCCCCCCCCCCCCCCcccCeEEEEeCCCcchhhhhHHHhhcCccEE
Q 004261 349 FLGNKKKATGVSLYSGNGMGNKPVSLVYNKGSNGSSSSNLCLPGSLQPELVRGKVVICDRGINARVEKGAVVRDAGGVGM 428 (765)
Q Consensus 349 ~~~~g~~~~~~s~~~~~~~~~~~~~~v~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~ 428 (765)
.+++. ....+.|.. ++.
T Consensus 233 -~g~~~----------------------------~~~~~~~~~---d~~------------------------------- 249 (600)
T 3hjr_A 233 -TGNGP----------------------------KLPFENSNL---DPS------------------------------- 249 (600)
T ss_dssp -ESSCC----------------------------CCCSSBTTS---SGG-------------------------------
T ss_pred -CCCCC----------------------------CCCcccccc---cCc-------------------------------
Confidence 00000 000000110 000
Q ss_pred EEeecCCCCccccccCccccEEEEchhhHHHHHHHHhcCCCceEEEEecceEecccCCCeeeeccCCCCCCCCCCCcCCc
Q 004261 429 ILANTAASGEELVADSHLLPAVAIGRKMGDIVREYAKTVPNPTALLTFGGTVLNVRPSPVVAAFSSRGPNMVTPQILKPD 508 (765)
Q Consensus 429 i~~n~~~~~~~~~~~~~~~p~~~v~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~lKPD 508 (765)
.....++.|... ...+.++.||++|+.. +
T Consensus 250 ---------------~~~~~~IsVgA~----------------------------~~~g~~a~yS~~G~~v--------~ 278 (600)
T 3hjr_A 250 ---------------NSNFWNLVVSAL----------------------------NADGVRSSYSSVGSNI--------F 278 (600)
T ss_dssp ---------------GGSSSEEEEEEE----------------------------CTTSSBCTTCCBCTTC--------C
T ss_pred ---------------cccCcceEEeee----------------------------cCCCCEeecccCCcce--------e
Confidence 000001111111 1234788999999976 7
Q ss_pred eeecCCcE--------EeeecCCCCC-------------CCcccCccceeeEEeccccchhhhhhhHHHHHHhhCCCCCH
Q 004261 509 VIGPGVNI--------LAAWTEASGP-------------TELEKDTRRTKFNIMSGTSMSCPHLSGVAALLKAAHPDWSP 567 (765)
Q Consensus 509 i~APG~~I--------~sa~~~~~~~-------------~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~sp 567 (765)
++|||.++ ....++.... ...........|..++|||||||||||++|||+|+||+||+
T Consensus 279 ~~apg~~~~~~~~~~vt~~~pG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sGTSmAaP~VAGvaALll~a~P~lt~ 358 (600)
T 3hjr_A 279 LSATGGEYGTDTPAMVTTDLPGCDMGYNRTDDPSTNRLHGNSQLDASCDYNGVMNGTSSATPSTSGAMALLMSAYPDLSV 358 (600)
T ss_dssp EEEECCSCSSSSCCEEEECCSSTTSSSSSTTSCCSSTTTTCTTTCTTCCEEEEECSHHHHHHHHHHHHHHHHHHSTTSCH
T ss_pred eccCCCCCCCCCcceeeecCCCccccccccCCccccccccccccCCCCCceeccccccccchhHHHHHHHHHHHCCCCCH
Confidence 89998762 2222211000 00011123347899999999999999999999999999999
Q ss_pred HHHHHHHHhcceeccCCCCCCC--------------------CCCCCCCCCCCcCCCcccCccccCCC
Q 004261 568 SAIKSALMTTAYVVDNTKSPLH--------------------DAADGRLSTPWAHGSGHVNPQKAISP 615 (765)
Q Consensus 568 ~~ik~~L~~TA~~~~~~~~~~~--------------------~~~~~~~~~~~~~G~G~vd~~~Al~~ 615 (765)
+|||++|++||++++....|+. .+..+. .....||||+||+.+|++.
T Consensus 359 ~~v~~~L~~TA~~~d~~~~p~~~~~~~~~~~~~~~~~~~~w~~N~aG~-~~s~~yGfG~vDA~~aV~~ 425 (600)
T 3hjr_A 359 RDLRDLLARSATRVDAKHQPVMVSYTSSTGKVRDVKGLEGWERNAAGM-WFSPTYGFGLIDVNKALEL 425 (600)
T ss_dssp HHHHHHHHHHCBCCSTTCCCEEEEEECTTSCEEEEEEECCSEECTTSC-EEBTTTBTCBCCHHHHHHH
T ss_pred HHHHHHHHhhCccCCCCCCcccccccccccccccccccCCcccccCCc-eEccccCCceecHHHHHHH
Confidence 9999999999999886654421 111111 1234799999999999874
No 35
>1t1e_A Kumamolisin; proenzyme, prosubtilase, activation mechanism, sedolisin, serine-carboxyl proteinase, hydrolase; 1.18A {Bacillus SP} SCOP: c.41.1.2 d.58.3.2 PDB: 1t1g_A 1t1i_A 1gt9_1 1gtg_1 1gtj_1* 1gtl_1* 1sio_A* 1sn7_A 1zvj_A 1siu_A 1zvk_A
Probab=99.91 E-value=1.6e-25 Score=254.93 Aligned_cols=96 Identities=25% Similarity=0.420 Sum_probs=78.1
Q ss_pred eeeecCCCeEEEEEeeccCCCChHHHHHHHHHHHh---CCCcEEEeccCCCCCCC---cccHHHHHHHHHHhCCcEEEEe
Q 004261 241 ARGMATHARVATYKVCWKTGCFGSDILAGIDRAIQ---DGVDVLSMSLGGGSAPY---YRDTIAVGAFAAMEKGIVVSCS 314 (765)
Q Consensus 241 ~~GvAP~A~l~~~kv~~~~g~~~~~i~~ai~~a~~---~g~dVIn~SlG~~~~~~---~~~~~~~a~~~a~~~Gi~vV~A 314 (765)
+.||||+|+|+.|++. ...++++++|+||++ ++++|||||||...... +.+.+..++.+|..+||+||+|
T Consensus 274 ~~gvAp~a~i~~~~~~----~~~~~~~~ai~~av~~~~~~~~VIS~S~G~~e~~~~~~~~~~~~~~~~~a~~~Gi~vv~A 349 (552)
T 1t1e_A 274 AGALAPGAKIAVYFAP----NTDAGFLNAITTAVHDPTHKPSIVSISWGGPEDSWAPASIAAMNRAFLDAAALGVTVLAA 349 (552)
T ss_dssp HHHHCTTSEEEEEECC----SSHHHHHHHHHHHHTCTTTCCSEEEECEEEEGGGSCHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred hhccCCCCeEEEEEcC----CCCchHHHHHHHHHhcccCCCCEEEecccCCcccCCHHHHHHHHHHHHHHHhCCeEEEEe
Confidence 4799999999999974 246789999999998 79999999999864321 2345667777888999999999
Q ss_pred cCCCCCCC--------CCcccCCCceEEEccCCC
Q 004261 315 AGNSGPTK--------ASLANVAPWILTVGAGTL 340 (765)
Q Consensus 315 AGN~G~~~--------~~~~~~ap~vitVgAst~ 340 (765)
|||+|... ..+++.+|+|++||+++.
T Consensus 350 sGd~G~~~~~~~~~~~~~~PAs~P~V~aVGat~~ 383 (552)
T 1t1e_A 350 AGDSGSTDGEQDGLYHVDFPAASPYVLACGGTRL 383 (552)
T ss_dssp CCSBGGGTTCCSSSCCCEETTTSTTSEEEEEEEE
T ss_pred cCCCCCCCCCCCCcccccCcccCCCEEEEecccc
Confidence 99999653 356688999999999654
No 36
>1ga6_A Serine-carboxyl proteinase; serine-carboxyl proteinase, hydrolase-hydrolase inhibitor CO; 1.00A {Pseudomonas SP} SCOP: c.41.1.2 PDB: 1ga4_A* 1ga1_A 1kdv_A* 1kdy_A* 1kdz_A* 1ke1_A* 1ke2_A* 1nlu_A*
Probab=99.87 E-value=2.6e-22 Score=217.76 Aligned_cols=99 Identities=18% Similarity=0.202 Sum_probs=81.1
Q ss_pred eeecCCCeEEEEEeeccCCCChHHHHHHHHHHHh-CCCcEEEeccCCCCC----CCcccHHHHHHHHHHhCCcEEEEecC
Q 004261 242 RGMATHARVATYKVCWKTGCFGSDILAGIDRAIQ-DGVDVLSMSLGGGSA----PYYRDTIAVGAFAAMEKGIVVSCSAG 316 (765)
Q Consensus 242 ~GvAP~A~l~~~kv~~~~g~~~~~i~~ai~~a~~-~g~dVIn~SlG~~~~----~~~~~~~~~a~~~a~~~Gi~vV~AAG 316 (765)
..+||+|+++.|++.+..++..++++++|+||++ ++++|||||||.... ..+.+.+..++.+|..+||+||+|||
T Consensus 90 g~~aP~a~~~~~~~~~~~~~~~~~~~~ai~~av~~~~~~ViS~S~G~~e~~~~~~~~~~~~~~~~~~a~~~Gitvv~AsG 169 (372)
T 1ga6_A 90 GSAGGAVQQLLFYMADQSASGNTGLTQAFNQAVSDNVAKVINVSLGWCEADANADGTLQAEDRIFATAAAQGQTFSVSSG 169 (372)
T ss_dssp HHTTSCEEEEEEEEECTTSSTTHHHHHHHHHHHHHCCCSEEEECCCEEHHHHHHTTHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred hhcCCCCcEEEEEeCCCCCcccHHHHHHHHHHHhcCCCCEEEeCCCCCCCCCchHHHHHHHHHHHHHHHhCCcEEEEEEC
Confidence 3578999999999986655778899999999998 899999999998531 12335677777788899999999999
Q ss_pred CCCCCCC-------------CcccCCCceEEEccCCC
Q 004261 317 NSGPTKA-------------SLANVAPWILTVGAGTL 340 (765)
Q Consensus 317 N~G~~~~-------------~~~~~ap~vitVgAst~ 340 (765)
|+|...+ .+++.+|+|++||+++.
T Consensus 170 d~G~~~~~~~g~~~~~~~~~~~PAs~P~V~aVGat~~ 206 (372)
T 1ga6_A 170 DEGVYECNNRGYPDGSTYSVSWPASSPNVIAVGGTTL 206 (372)
T ss_dssp SBTTBTTTTTTCCCTTCCBCEETTTCTTSEEEEEEEE
T ss_pred CCCCccccccCccCCccCCcCCCCCCCCeEEEEeeec
Confidence 9997542 45678999999999754
No 37
>2w2n_P Proprotein convertase subtilisin/kexin type 9; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2m_P 2w2o_P 2w2p_P 2w2q_P 2xtj_P
Probab=99.09 E-value=9.3e-11 Score=104.66 Aligned_cols=80 Identities=15% Similarity=0.117 Sum_probs=69.4
Q ss_pred cCCCceEEEEecCCCCCCcccchhHHHHHhhccccCCCCceEEEEcceeeEEEEEcCHHHHHHHHcCCCeEEEEEcceec
Q 004261 22 TAAKQTYIVHMKHQAKPSTFSTHNDWYASSVQSLSSSTDSLLYTYNTAYNGFAASLDPDQAQALRQSDAVLGVYEDTLYT 101 (765)
Q Consensus 22 ~~~~~~yIV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~l~~~~~~~L~~~p~V~~v~~~~~~~ 101 (765)
...+++|||+|++......+..|++|+.+++++ .....+++|+|++.|+||+++|+++++++|+++|+|.+||+|+.++
T Consensus 34 ~~ip~~YIV~lk~~~~~~~~~~h~~~l~s~~~~-~~~~~~i~~sY~~~~~GFaa~Lt~~~~~~L~~~P~V~~VE~D~~v~ 112 (114)
T 2w2n_P 34 WRLPGTYVVVLKEETHLSQSERTARRLQAQAAR-RGYLTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIEEDSSVF 112 (114)
T ss_dssp GEEEEEEEEEECTTCCHHHHHHHHHHHHHHHHH-TTCCCEEEEEECSSSSEEEEECCGGGHHHHHTSTTEEEEEEEEEEE
T ss_pred cCCCCcEEEEECCCCCHHHHHHHHHHHHHHhhh-cccCCceEEEecccceEEEEEcCHHHHHHHHcCCCccEEEeCceEe
Confidence 345789999999987666667889999988776 2245799999999999999999999999999999999999999876
Q ss_pred c
Q 004261 102 L 102 (765)
Q Consensus 102 ~ 102 (765)
.
T Consensus 113 ~ 113 (114)
T 2w2n_P 113 A 113 (114)
T ss_dssp E
T ss_pred c
Confidence 5
No 38
>3edy_A Tripeptidyl-peptidase 1; protease, TPP1, sedolisin, batten disease, lincl, zymogen, P exopeptidase, endopeptidase, S53 family, CLN2; HET: NAG; 1.85A {Homo sapiens} PDB: 3ee6_A*
Probab=99.05 E-value=3e-10 Score=128.32 Aligned_cols=97 Identities=15% Similarity=0.207 Sum_probs=63.2
Q ss_pred eecCCCeEEEEEeeccCCCChHHHHHHHHHHH--hCCCcEEEeccCCCCCC---CcccHHHHHHHHHHhCCcEEEEecCC
Q 004261 243 GMATHARVATYKVCWKTGCFGSDILAGIDRAI--QDGVDVLSMSLGGGSAP---YYRDTIAVGAFAAMEKGIVVSCSAGN 317 (765)
Q Consensus 243 GvAP~A~l~~~kv~~~~g~~~~~i~~ai~~a~--~~g~dVIn~SlG~~~~~---~~~~~~~~a~~~a~~~Gi~vV~AAGN 317 (765)
+++++..++.|-.-+. ......++..+++.. .+.++|||+|||..... .+.+.+...+..+..+||.|++|+||
T Consensus 263 a~~~~i~~~~~~~~g~-~~~~e~~l~~l~~l~~~~~~~~ViS~S~G~~e~~~~~~y~~~~~~~~~~~~~~Gitv~~ASGD 341 (544)
T 3edy_A 263 SAGANISTWVYSSPGR-HEGQEPFLQWLMLLSNESALPHVHTVSYGDDEDSLSSAYIQRVNTELMKAAARGLTLLFASGD 341 (544)
T ss_dssp HHSTTSEEEEECCCSC-CTTCCHHHHHHHHHTTCSSCCSEEEEECCEEGGGSCHHHHHHHHHHHHHHHHTTCEEEEECCS
T ss_pred ccCCCceEEEEecCCc-ccccccHHHHHHHHhccCCCCcEEEecCCCcccccCHHHHHHHHHHHHHHHhCCeEEEEecCC
Confidence 4445555554432111 112234555555444 35689999999986432 22344566667888999999999999
Q ss_pred CCCCC----------CCcccCCCceEEEccCCC
Q 004261 318 SGPTK----------ASLANVAPWILTVGAGTL 340 (765)
Q Consensus 318 ~G~~~----------~~~~~~ap~vitVgAst~ 340 (765)
+|... ...++++|||++||+++.
T Consensus 342 ~G~~~~~~~~~~~~~~~~Pas~P~VtaVGgT~l 374 (544)
T 3edy_A 342 SGAGCWSVSGRHQFRPTFPASSPYVTTVGGTSF 374 (544)
T ss_dssp STTBCEEETTEEECCCEETTTCTTSEEEEEEEE
T ss_pred CCccccCCCCCccccCCCcCCCCcEEEEeeeec
Confidence 99642 245688999999999764
No 39
>3cnq_P Subtilisin BPN'; uncleaved, proenzyme, substrate complex, hydrolase, metal- binding, protease, secreted, serine protease, sporulation; 1.71A {Bacillus amyloliquefaciens} PDB: 3bgo_P 3co0_P 1spb_P 1scj_B
Probab=98.97 E-value=1.3e-09 Score=91.09 Aligned_cols=75 Identities=20% Similarity=0.290 Sum_probs=58.6
Q ss_pred cCCCceEEEEecCCCCCCcccchhHHHHHhhccccCCCCceEEEEcceeeEEEEEcCHHHHHHHHcCCCeEEEEEcceec
Q 004261 22 TAAKQTYIVHMKHQAKPSTFSTHNDWYASSVQSLSSSTDSLLYTYNTAYNGFAASLDPDQAQALRQSDAVLGVYEDTLYT 101 (765)
Q Consensus 22 ~~~~~~yIV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~l~~~~~~~L~~~p~V~~v~~~~~~~ 101 (765)
+..+++|||+||++.....+ ..+++++ .+.++.++|++ |+||+++++++++++|+++|+|.+||+|+.++
T Consensus 5 ~~i~~~YIV~~k~~~~~~~~------~~~~~~~---~g~~i~~~y~~-~~Gfaa~l~~~~~~~L~~~p~V~~Ve~D~~v~ 74 (80)
T 3cnq_P 5 SNGEKKYIVGFKQGFKSCAK------KEDVISE---KGGKLQKCFKY-VDAASATLNEKAVEELKKDPSVAYVEEDKLYR 74 (80)
T ss_dssp ---CCEEEEEECTTCCSHHH------HHHHHHT---TTCEEEEECSS-SSEEEEECCHHHHHHHHTCTTEEEEEECCEEE
T ss_pred ccCCCCEEEEECCCCChHHH------HHHHHHH---cCCcceEEEcc-cEEEEEEcCHHHHHHHHhCCCccEEEeCcEEE
Confidence 45689999999988764321 1223332 34789999998 99999999999999999999999999999999
Q ss_pred cccCC
Q 004261 102 LHTTR 106 (765)
Q Consensus 102 ~~~~~ 106 (765)
++++.
T Consensus 75 ~~tt~ 79 (80)
T 3cnq_P 75 ALSAT 79 (80)
T ss_dssp ECCC-
T ss_pred Eeeec
Confidence 87764
No 40
>2qtw_A Proprotein convertase subtilisin/kexin type 9 Pro; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_A 2pmw_A 3h42_A 3bps_P 3gcw_P 3gcx_P 3p5b_P 3p5c_P
Probab=98.84 E-value=2.8e-09 Score=96.22 Aligned_cols=79 Identities=15% Similarity=0.125 Sum_probs=63.9
Q ss_pred CCCceEEEEecCCCCCCcccchhHHHHHhhccccCCCCceEEEEcceeeEEEEEcCHHHHHHHHcCCCeEEEEEcceecc
Q 004261 23 AAKQTYIVHMKHQAKPSTFSTHNDWYASSVQSLSSSTDSLLYTYNTAYNGFAASLDPDQAQALRQSDAVLGVYEDTLYTL 102 (765)
Q Consensus 23 ~~~~~yIV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~l~~~~~~~L~~~p~V~~v~~~~~~~~ 102 (765)
..+++|||+||++.....+..+.+++.+++++.. .+.++.|+|++.|+||+++++++++++|+++|+|.+|++|+.++.
T Consensus 45 ~Ip~~YIV~~K~~~~~~~~~~~~~~l~~~~~~r~-~g~~i~~~Y~~~~~GFaa~l~~~~~~~L~~~p~V~~VE~D~~v~a 123 (124)
T 2qtw_A 45 RLPGTYVVVLKEETHLSQSERTARRLQAQAARRG-YLTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIEEDSSVFA 123 (124)
T ss_dssp EEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTT-CCCEEEEEECSSSCEEEEECCGGGHHHHHTSTTEEEEEEEEEEEE
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHHHHHHHhhcc-cCCceEEEecccceEEEEEcCHHHHHHHHcCCCCcEEEeCceEec
Confidence 4579999999998876555555556555443311 347899999999999999999999999999999999999998764
No 41
>1v5i_B POIA1, IA-1=serine proteinase inhibitor; protease-inhibitor complex, subtilisin, hydrolase-Pro binding complex; 1.50A {Pleurotus ostreatus} SCOP: d.58.3.2 PDB: 1itp_A
Probab=98.70 E-value=2.9e-08 Score=81.67 Aligned_cols=70 Identities=20% Similarity=0.328 Sum_probs=57.4
Q ss_pred ceEEEEecCCCCCCcccchhHHHHHhhccccCCCCceEEEEc-ceeeEEEEEcCHHHHHHHHcC--CCeEEEEEcceecc
Q 004261 26 QTYIVHMKHQAKPSTFSTHNDWYASSVQSLSSSTDSLLYTYN-TAYNGFAASLDPDQAQALRQS--DAVLGVYEDTLYTL 102 (765)
Q Consensus 26 ~~yIV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~-~~~~g~s~~l~~~~~~~L~~~--p~V~~v~~~~~~~~ 102 (765)
+.|||.||++........+.+++... +.++.+.|+ ..|+||+++++++++++|+++ |.|.+||+|+.+++
T Consensus 3 ~sYIV~lk~~~~~~~~~~~~~~~~~~-------gg~i~~~y~~~~~~Gfa~~~~~~~l~~l~~~~~p~V~~VE~D~~v~~ 75 (76)
T 1v5i_B 3 GKFIVIFKNDVSEDKIRETKDEVIAE-------GGTITNEYNMPGMKGFAGELTPQSLTKFQGLQGDLIDSIEEDHVAHA 75 (76)
T ss_dssp EEEEEEECTTCCHHHHHHHHHHHHHH-------TCCCCEEEEETTEEEEEEEECHHHHHHHHHTBTTTEEEEEECCEEEC
T ss_pred ceEEEEECCCCCHHHHHHHHHHHHhh-------CCceEEEEEcCceeEEEEEcCHHHHHHHHhcCCCCCcEEcCCcEEeC
Confidence 68999999987655555555554432 357889994 799999999999999999999 89999999998764
No 42
>3icu_A E3 ubiquitin-protein ligase RNF128; E3 ligase, energy, PA domain, transmembrane,protein turnover conjugation pathway; HET: NAG; 2.10A {Homo sapiens}
Probab=98.66 E-value=1.3e-07 Score=91.63 Aligned_cols=94 Identities=16% Similarity=0.180 Sum_probs=74.5
Q ss_pred CCCCCCCCCCCCCc-------ccCeEEEEeCCC-cchhhhhHHHhhcCccEEEEeecCCCCc---cc-cccCccccEEEE
Q 004261 385 SSNLCLPGSLQPEL-------VRGKVVICDRGI-NARVEKGAVVRDAGGVGMILANTAASGE---EL-VADSHLLPAVAI 452 (765)
Q Consensus 385 ~~~~c~~~~~~~~~-------~~gkivl~~~g~-~~~~~~~~~~~~~Ga~g~i~~n~~~~~~---~~-~~~~~~~p~~~v 452 (765)
...+|.+....... .++||+|++||. |.|.+|..+++++||.++|++|+...+. .+ ......||+++|
T Consensus 82 ~~~GC~~~~~~~~~~~~~~~~~~gkIaLV~RG~~CsF~~Kv~nAq~aGA~avIIyNn~~~g~~~~~m~~~~~~~IPsv~I 161 (194)
T 3icu_A 82 ALNACNPHTNFTVPTVWGSTVQVSWLALIQRGGGCTFADKIHLAYERGASGAVIFNFPGTRNEVIPMSHPGAVDIVAIMI 161 (194)
T ss_dssp CTTCCSTTCCBCCCBCTTSSCBCCEEEEEESCTTCCHHHHHHHHHHTTCSEEEEECCTTCTTCCCCCCCTTCCSSEEEEE
T ss_pred CcCCCCCCccccCCcccccccCCCeEEEEECCCCcCHHHHHHHHHHCCCcEEEEEeCCCCCCceeeecCCCCCceeEEEE
Confidence 56789886643222 478999999999 9999999999999999999999853221 11 122347999999
Q ss_pred chhhHHHHHHHHhcCCCceEEEEecc
Q 004261 453 GRKMGDIVREYAKTVPNPTALLTFGG 478 (765)
Q Consensus 453 ~~~~~~~l~~~~~~~~~~~~~i~~~~ 478 (765)
+..+|+.|+++++.+...+++|.+..
T Consensus 162 s~~~G~~L~~~L~~G~~Vtvti~vg~ 187 (194)
T 3icu_A 162 GNLKGTKILQSIQRGIQVTMVIEVGK 187 (194)
T ss_dssp CHHHHHHHHHHHHTTCCEEEEEEEEE
T ss_pred CHHHHHHHHHHHHCCCeEEEEEECCC
Confidence 99999999999999988777776543
No 43
>2z30_B TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 2z2y_B 3a3p_B 2z56_B 2z58_B 2z57_B 3a3n_B 3a3o_B
Probab=97.75 E-value=4.2e-05 Score=60.50 Aligned_cols=63 Identities=13% Similarity=0.145 Sum_probs=50.7
Q ss_pred ceEEEEecCCCCCCcccchhHHHHHhhccccCCCCceEEEEcceeeEEEEEcCHHHHHHHHcCCCeEEEEEcceecc
Q 004261 26 QTYIVHMKHQAKPSTFSTHNDWYASSVQSLSSSTDSLLYTYNTAYNGFAASLDPDQAQALRQSDAVLGVYEDTLYTL 102 (765)
Q Consensus 26 ~~yIV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~l~~~~~~~L~~~p~V~~v~~~~~~~~ 102 (765)
.+|||.|+++... . +.+...++++.++|. .+++++++|+++.+++|+++|+|.+|++|...+.
T Consensus 2 ~~~IV~f~~~~~~----------~---~~i~~~gG~i~~~~~-~I~a~~~~lp~~~~~~L~~~p~V~yVE~D~~v~a 64 (65)
T 2z30_B 2 IRVIVSVDKAKFN----------P---HEVLGIGGHIVYQFK-LIPAVVVDVPANAVGKLKKMPGVEKVEFDHQAVL 64 (65)
T ss_dssp EEEEEEECGGGCC----------G---GGGGGGTCEEEEECS-SSSEEEEEECGGGHHHHHTSTTEEEEEECCEEEE
T ss_pred eeEEEEEcCcchh----------H---HHHHHCCCEEEEEec-CCcEEEEEeCHHHHHHHhcCCCceEEecCcEEEc
Confidence 4899999875221 1 123334589999998 6999999999999999999999999999987653
No 44
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=96.50 E-value=0.017 Score=63.53 Aligned_cols=70 Identities=21% Similarity=0.308 Sum_probs=58.0
Q ss_pred CCcccCeEEEEeCCCcchhhhhHHHhhcCccEEEEeecCCCCc--ccc-ccCccccEEEEchhhHHHHHHHHh
Q 004261 396 PELVRGKVVICDRGINARVEKGAVVRDAGGVGMILANTAASGE--ELV-ADSHLLPAVAIGRKMGDIVREYAK 465 (765)
Q Consensus 396 ~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~--~~~-~~~~~~p~~~v~~~~~~~l~~~~~ 465 (765)
..+++|||+++.+|.|.+..|..+++++||.|+|++++..... .+. .....+|.+.++..+++.|.+++.
T Consensus 110 ~~dv~GkIvlv~~g~~~~~~k~~~A~~~GA~gvIi~~~~~~~~~g~~~~~~~~~IP~~~Is~~~a~~L~~~l~ 182 (421)
T 2ek8_A 110 GKDLNGKIALIQRGNISFADKVRNAAKQGAKAVIIYNNTDGKLNGTLGGSDASFVAAVGITKQEGDALAANLR 182 (421)
T ss_dssp TSCCTTSEEEEECCSSCHHHHHHHHHHTTCSEEEEECSSSSCCCCBCSSCCTTCCEEEEECHHHHHHHHHHHH
T ss_pred CCCcCceEEEEeCCCCCHHHHHHHHHHCCCeEEEEEeCCCcccccccCCCCCCCccEEEeCHHHHHHHHHHhh
Confidence 3479999999999999999999999999999999999864211 111 134678999999999999999984
No 45
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=95.58 E-value=0.044 Score=60.53 Aligned_cols=104 Identities=14% Similarity=0.188 Sum_probs=71.7
Q ss_pred CCCeeEEEEEecCCCCCCCCCCCCCCCCCCCcccCeEEEEeCCCcc---------hhhh----hHHHhhcCccEEEEeec
Q 004261 367 MGNKPVSLVYNKGSNGSSSSNLCLPGSLQPELVRGKVVICDRGINA---------RVEK----GAVVRDAGGVGMILANT 433 (765)
Q Consensus 367 ~~~~~~~~v~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~---------~~~~----~~~~~~~Ga~g~i~~n~ 433 (765)
.....-++|+..+ ...|.. ....+++|||||+.++.|. +..+ ..++.++||+|+|++|.
T Consensus 103 ~~~vta~lV~v~~------~~~~~~--~~~~dvkGKIVlv~~~~~~~~~~~~y~~~~~kr~~~a~~A~~aGA~avIi~~~ 174 (444)
T 3iib_A 103 AQGLSATIVRFDT------LQDLQN--AEAGSLNDKIAFIDAKTERHRDGKGYGQTASGRSRGAVAAAEKGAVGIIIRSI 174 (444)
T ss_dssp TTCEEEEEEEESS------HHHHHT--SCTTTTTTCEEEECCCCCCCTTCHHHHHHHHHHHHHHHHHHHTTCSEEEEECS
T ss_pred CCCeEEEEEecCC------HHHHhh--ccccccCccEEEEeCCCCCCcccccccchhhhhhhHHHHHHHCCCeEEEEEcc
Confidence 3456778888642 112322 2346899999999998884 3333 35689999999999987
Q ss_pred CCCCc-------c-ccccCccccEEEEchhhHHHHHHHHhcCCCceEEEEecc
Q 004261 434 AASGE-------E-LVADSHLLPAVAIGRKMGDIVREYAKTVPNPTALLTFGG 478 (765)
Q Consensus 434 ~~~~~-------~-~~~~~~~~p~~~v~~~~~~~l~~~~~~~~~~~~~i~~~~ 478 (765)
..... . .......+|++.|+..+++.|.+.+..+....+++....
T Consensus 175 ~~~~~~~~~tg~~~~~~~~~~IP~~~Is~~da~~L~~~l~~g~~~~v~l~~~~ 227 (444)
T 3iib_A 175 GTDHDRMAHTGMMRYEEGVTAIPAAAISNPDADLINAMLKRDKEVVISLELGS 227 (444)
T ss_dssp CSCCSSCCCCCBCCCCTTSCCCCEEEECHHHHHHHHHHHTTTCCCEEEEEEEE
T ss_pred CCcccccccCCccccCCCCCCCCeEEecHHHHHHHHHHHhCCCCeEEEEEEee
Confidence 54221 0 111235799999999999999999988766666665544
No 46
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=95.36 E-value=0.027 Score=64.79 Aligned_cols=69 Identities=17% Similarity=0.188 Sum_probs=55.4
Q ss_pred CcccCeEEEEeCCCcchhhhhHHHhhcCccEEEEeecCCCCc------------------ccc----------------c
Q 004261 397 ELVRGKVVICDRGINARVEKGAVVRDAGGVGMILANTAASGE------------------ELV----------------A 442 (765)
Q Consensus 397 ~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~------------------~~~----------------~ 442 (765)
.+++|||+|+.+|.|.+..|..+++++||.|+|++++..... ... .
T Consensus 128 vdv~GkIvlv~~g~~~~~~K~~~A~~~GA~gvii~~~~~~~~~~~~~~~~~G~~~~~~Gdp~tpg~ps~~~~~~~~~~~~ 207 (640)
T 3kas_A 128 TPVNGSIVIVRAGKITFAEKVANAESLNAIGVLIYMDQTKFPIVNAELSFFGHAHLGTGDPYTPGFPSFNHTQFPPSRSS 207 (640)
T ss_dssp SCCTTSEEEEESCSSCHHHHHHHHHTTTCSEEEEECCTTTCCCSCTTCCCCEECCSSSSCSCCCSSCC---CCCCCCSSC
T ss_pred cccCCcEEEEecCCCCHHHHHHHHHHCCCeEEEEEeccccccccccccccccccccCCCCCCCCCccccccccccccccc
Confidence 479999999999999999999999999999999998764210 000 0
Q ss_pred cCccccEEEEchhhHHHHHHHHh
Q 004261 443 DSHLLPAVAIGRKMGDIVREYAK 465 (765)
Q Consensus 443 ~~~~~p~~~v~~~~~~~l~~~~~ 465 (765)
....||++.|+..++..|++.+.
T Consensus 208 ~~p~IP~~~Is~~~a~~Ll~~l~ 230 (640)
T 3kas_A 208 GLPNIPVQTISRAAAEKLFGNME 230 (640)
T ss_dssp CCCSSCEEECCHHHHHHHHTTEE
T ss_pred CCCCCCEEecCHHHHHHHHHHcc
Confidence 12368999999999999987654
No 47
>2ys4_A Hydrocephalus-inducing protein homolog; hydin, PAPD-like, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.35 E-value=0.077 Score=47.26 Aligned_cols=74 Identities=18% Similarity=0.309 Sum_probs=54.0
Q ss_pred cceEEEEEEEEecCCCceeEEEEEeCCCCceEEEEcCeEEEeecCeeEEEEEEEEEecCCCCCCCcEEEEEEEE-CCccE
Q 004261 673 QRVVRYTRELTNVGPARSLYNVTADGPSTVGISVRPKRLLFRTVGEKKRYTVTFVAKNGDQKMGGAAFGSIVWG-NAQHQ 751 (765)
Q Consensus 673 ~~~~~~~rtvtn~g~~~~ty~~~~~~~~g~~v~v~p~~l~~~~~~~~~~~~vt~~~~~~~~~~~~~~~G~~~~~-~~~~~ 751 (765)
+.+.+.+.+|+|+|+.+..|+.....| .+++|..-.+ ++|+++.++|+|.+... ..+.+.|... ++...
T Consensus 40 ~~~~~~~~~l~N~g~~~~~f~~~~~~~----F~i~P~~g~L-~pg~~~~i~V~F~P~~~-----g~~~~~l~v~~~~g~~ 109 (122)
T 2ys4_A 40 KYSTQKILLVRNIGNKNAVFHIKTCRP----FSIEPAIGTL-NVGESMQLEVEFEPQSV-----GDHSGRLIVCYDTGEK 109 (122)
T ss_dssp SSCEEEEEEEECCSSSCEEEEEECCTT----EEEESSEEEE-CTTCEEEEEEEECCSSS-----BCCCCBCEEEESSSCE
T ss_pred CCeEEEEEEEEECCCCCEEEEEecCCC----eEEECCcCEE-CCCCEEEEEEEEEcCCC-----ccEEEEEEEEECCCCE
Confidence 367788889999999999898876543 6778999998 79999999999997642 2345555443 44444
Q ss_pred EEEEE
Q 004261 752 VRSPV 756 (765)
Q Consensus 752 v~~P~ 756 (765)
+.+++
T Consensus 110 ~~v~L 114 (122)
T 2ys4_A 110 VFVSL 114 (122)
T ss_dssp ECCEE
T ss_pred EEEEE
Confidence 44443
No 48
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=94.65 E-value=0.029 Score=65.17 Aligned_cols=71 Identities=28% Similarity=0.335 Sum_probs=56.4
Q ss_pred CCcccCeEEEEeCCCcchhhhhHHHhhcCccEEEEeecCCC-------------------------------Ccccc---
Q 004261 396 PELVRGKVVICDRGINARVEKGAVVRDAGGVGMILANTAAS-------------------------------GEELV--- 441 (765)
Q Consensus 396 ~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~-------------------------------~~~~~--- 441 (765)
..+++|||+|+++|.|.+..|..+++++||+|+|+++++.+ |....
T Consensus 150 ~~~v~GkIvlv~~G~~~~~~Kv~~A~~~GA~gviiy~dp~d~~~~g~~~yP~~~~~p~~~vqrGsv~~~~~~GDp~TPG~ 229 (707)
T 3fed_A 150 GINCTGKIVIARYGKIFRGNKVKNAMLAGAIGIILYSDPADYFAPEVQPYPKGWNLPGTAAQRGNVLNLNGAGDPLTPGY 229 (707)
T ss_dssp CCCCTTCEEEEECCSSCHHHHHHHHHHTTCSEEEEECCHHHHCCTTCCBTTTSSBCCTTCCCCCCCCCCTTCCSTTCTTS
T ss_pred CCCCCCeEEEEECCCCCHhHHHHHHHHCCCEEEEEEcCchhccccccccCCCCccCCCccccccceecccCCCCCCCCCC
Confidence 35799999999999999999999999999999999986320 00000
Q ss_pred --------------ccCccccEEEEchhhHHHHHHHHhc
Q 004261 442 --------------ADSHLLPAVAIGRKMGDIVREYAKT 466 (765)
Q Consensus 442 --------------~~~~~~p~~~v~~~~~~~l~~~~~~ 466 (765)
.....||++-|+..++..|++.+..
T Consensus 230 ps~~~~~r~~~~~~~~~p~IP~~pIS~~da~~Ll~~l~g 268 (707)
T 3fed_A 230 PAKEYTFRLDVEEGVGIPRIPVHPIGYNDAEILLRYLGG 268 (707)
T ss_dssp CCCTTCCCCCGGGCTTCCSSCEEEECHHHHHHHHHTBCB
T ss_pred cccCCCcccChhhccCCCCCCeEecCHHHHHHHHHHhcC
Confidence 0125789999999999999987754
No 49
>3qbt_B Inositol polyphosphate 5-phosphatase OCRL-1; protein transport, vesicular trafficking, GTPase, LOWE syndr immunoglobulin fold, RAB8A, endocytosis; HET: GNP; 2.00A {Homo sapiens}
Probab=91.83 E-value=1.6 Score=39.64 Aligned_cols=87 Identities=7% Similarity=0.059 Sum_probs=61.5
Q ss_pred ceEEEEEEEEecCCCceeEEEEEeCC----CCceEEEEcCeEEEeecCeeEEEEEEEEEecCCC---CCC-CcEEEEEEE
Q 004261 674 RVVRYTRELTNVGPARSLYNVTADGP----STVGISVRPKRLLFRTVGEKKRYTVTFVAKNGDQ---KMG-GAAFGSIVW 745 (765)
Q Consensus 674 ~~~~~~rtvtn~g~~~~ty~~~~~~~----~g~~v~v~p~~l~~~~~~~~~~~~vt~~~~~~~~---~~~-~~~~G~~~~ 745 (765)
...+-+.+++|+|..+.+|++..... ..--++|+|..-++ ++|++..++|++.+..... ..+ .-..--|++
T Consensus 43 ~~~~~~l~I~Ntg~vpa~F~f~~~~~~~~~~~~wl~v~P~~G~L-~Pge~~~I~v~~~v~~~~~~~ln~g~~~l~diLvL 121 (140)
T 3qbt_B 43 QLQKEKFQISNNGQVPCHFSFIPKLNDSQYCKPWLRAEPFEGYL-EPNETVDISLDVYVSKDSVTILNSGEDKIEDILVL 121 (140)
T ss_dssp CCEEEEEEEEECSSSCEEEEEECCTTCSSSSCTTEEEESCEEEE-CTTCEEEEEEEECBCHHHHHHHHHSSSCSCEEEEE
T ss_pred eeeeeEEEEEcCCccceEEEEecCCCchhhhhHhhhcCCccccc-CCCCeeEEEEEEEEccCcccccccchhhhheeEEE
Confidence 45677788999999999999975321 11236778999988 7999999999999754100 001 234566777
Q ss_pred E-CCccEEEEEEEEEec
Q 004261 746 G-NAQHQVRSPVAFSWT 761 (765)
Q Consensus 746 ~-~~~~~v~~P~~~~~~ 761 (765)
. .++.+..+|+...+-
T Consensus 122 ~Ve~G~d~fI~v~g~~~ 138 (140)
T 3qbt_B 122 HLDRGKDYFLTISGNYL 138 (140)
T ss_dssp EETTSCEEEEEEEEEEC
T ss_pred EeecCCcEEEEEecccc
Confidence 6 577888888877654
No 50
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=88.31 E-value=0.35 Score=59.38 Aligned_cols=25 Identities=28% Similarity=0.496 Sum_probs=22.9
Q ss_pred cCCCCCCcEEEEeccCCCCCCCCCC
Q 004261 128 FDKASLDVIIGVLDTGVWPESKSFD 152 (765)
Q Consensus 128 ~~~~G~gV~VaVIDtGid~~Hp~f~ 152 (765)
..+.|+||+|||+|||||+.+|-|.
T Consensus 31 P~ydGrgv~iai~DtGVDP~a~glq 55 (1354)
T 3lxu_X 31 PEYDGRDVTIAIFDSGVDPRATGLE 55 (1354)
T ss_dssp TTCSSTTCEEEEEESCCCTTSTTSS
T ss_pred CCCCCCccEEEEEeCCCCCCCCcce
Confidence 3678999999999999999999985
No 51
>2e6j_A Hydin protein; PAPD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=86.54 E-value=0.75 Score=39.79 Aligned_cols=67 Identities=16% Similarity=0.157 Sum_probs=48.2
Q ss_pred ceEEEEEEEEecCCCceeEEEEEeC-CCCceEEEEcCeEEEeecCeeEEEEEEEEEecCCCCCCCcEEEEEEEE
Q 004261 674 RVVRYTRELTNVGPARSLYNVTADG-PSTVGISVRPKRLLFRTVGEKKRYTVTFVAKNGDQKMGGAAFGSIVWG 746 (765)
Q Consensus 674 ~~~~~~rtvtn~g~~~~ty~~~~~~-~~g~~v~v~p~~l~~~~~~~~~~~~vt~~~~~~~~~~~~~~~G~~~~~ 746 (765)
...+.+.+++|+|+.+..|+..... +.+...+++|..-.+ ++|++++++|+|.+... + ...-.|++.
T Consensus 26 ~~~~~~~~l~N~g~~p~~~~~~~~~~~~~~~f~v~p~~g~i-~pg~~~~i~V~f~~~~~----g-~f~~~i~v~ 93 (112)
T 2e6j_A 26 SAHCYEAILYNKGSIDALFNMTPPTSALGACFVFSPKEGII-EPSGVQAIQISFSSIIL----G-NFEEEFLVN 93 (112)
T ss_dssp CCEEEEEEEEECCSSCEEEEECCCSSHHHHHCEEESSEEEE-CTTBCCEEEEEECCCCC----E-EEEEEECEE
T ss_pred CEEEEEEEEEECCcceEEEEEecCCccccCcEEEECCcCEE-CCCCEEEEEEEEECCCc----c-eEEEEEEEE
Confidence 5667788999999999999984321 123346778999988 79999999999997541 2 233456654
No 52
>2r39_A FIXG-related protein; structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, iron, iron-sulfur; 2.02A {Vibrio parahaemolyticus}
Probab=84.98 E-value=3.3 Score=36.21 Aligned_cols=56 Identities=18% Similarity=0.176 Sum_probs=45.8
Q ss_pred ceEEEEEEEEecCCCceeEEEEEeCCCCceEEEEcCeEEEeecCeeEEEEEEEEEecC
Q 004261 674 RVVRYTRELTNVGPARSLYNVTADGPSTVGISVRPKRLLFRTVGEKKRYTVTFVAKNG 731 (765)
Q Consensus 674 ~~~~~~rtvtn~g~~~~ty~~~~~~~~g~~v~v~p~~l~~~~~~~~~~~~vt~~~~~~ 731 (765)
-.-.++..+.|....+.+|.+++...+|+++. .|..+++ ++++..++.|.+.++..
T Consensus 31 I~N~Ytlki~Nkt~~~~~~~l~v~g~~~l~~~-g~~~i~v-~~g~~~~~~v~v~~~~~ 86 (118)
T 2r39_A 31 VENTYTLKVINKTQQVQEYNLDVKGLNDVSWY-GKQTIQV-EPGEVLNLPMSLGADPD 86 (118)
T ss_dssp EEEEEEEEEEECSSSCEEEEEEEESCSSCEEE-SCCEEEE-CTTCEEEEEEEEEECGG
T ss_pred EEEEEEEEEEECCCCCEEEEEEEeCCcccEEe-CCCcEEE-CCCCEEEEEEEEEEChH
Confidence 35567889999999999999999987776653 3566888 79999999999998754
No 53
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=84.18 E-value=0.64 Score=51.09 Aligned_cols=30 Identities=33% Similarity=0.417 Sum_probs=25.7
Q ss_pred CCeeeeccCCCCCCCCCCCcCCceeecCCcEEeeecCC
Q 004261 486 SPVVAAFSSRGPNMVTPQILKPDVIGPGVNILAAWTEA 523 (765)
Q Consensus 486 ~~~~a~fSS~Gp~~~~~~~lKPDi~APG~~I~sa~~~~ 523 (765)
.+.++.||++||.. ||+|||++|+++++.+
T Consensus 183 ~~~~~~~S~~g~~v--------dv~ApG~~i~s~~~~g 212 (441)
T 1y9z_A 183 NLDHAAFSQYTDQV--------EISGPGEAILSTVTVG 212 (441)
T ss_dssp TCCBCTTSCCCTTE--------EEEEECSSEEEECSTT
T ss_pred CCCCCccccCCCce--------EEEeccCCeeccccCC
Confidence 35789999999854 9999999999998754
No 54
>3qis_A Inositol polyphosphate 5-phosphatase OCRL-1; DENT disease, RAC1, RAB gtpases, APPL1, endocytic PATH golgi complex, hydrolase-protein binding complex; 2.30A {Homo sapiens} PDB: 2qv2_A
Probab=80.86 E-value=14 Score=39.24 Aligned_cols=87 Identities=6% Similarity=0.036 Sum_probs=59.9
Q ss_pred ceEEEEEEEEecCCCceeEEEEEeCCCCce----EEEEcCeEEEeecCeeEEEEEEEEEecCCCC---C-CCcEEEEEEE
Q 004261 674 RVVRYTRELTNVGPARSLYNVTADGPSTVG----ISVRPKRLLFRTVGEKKRYTVTFVAKNGDQK---M-GGAAFGSIVW 745 (765)
Q Consensus 674 ~~~~~~rtvtn~g~~~~ty~~~~~~~~g~~----v~v~p~~l~~~~~~~~~~~~vt~~~~~~~~~---~-~~~~~G~~~~ 745 (765)
...+-+.|++|+|..+.+|++.-....... ++|+|..-++ .+|++.+++|++.+...... . .....--|++
T Consensus 46 ~~~~~~l~i~N~g~~pa~f~f~~~~~~~~~~~~wl~v~p~~g~l-~Pge~~~i~l~~~v~~~~~~~ln~g~~~l~diLvL 124 (366)
T 3qis_A 46 QLQKEKFQISNNGQVPCHFSFIPKLNDSQYCKPWLRAEPFEGYL-EPNETVDISLDVYVSKDSVTILNSGEDKIEDILVL 124 (366)
T ss_dssp CCEEEEEEEEECSSSCEEEEEECCTTCSSSSCTTEEEESCEEEE-CTTCEEEEEEEECBCTTTHHHHHHTSSCSCEEEEE
T ss_pred CeEEEEEEEEecCCceEEEEEEeCCCCCCCCCCcEEEeCCccEE-CCCCEEEEEEEEEECHHHHHHHhcCccccceEEEE
Confidence 567777889999999999999654322222 7789999888 79999999999988752100 0 1123445666
Q ss_pred E-CCccEEEEEEEEEec
Q 004261 746 G-NAQHQVRSPVAFSWT 761 (765)
Q Consensus 746 ~-~~~~~v~~P~~~~~~ 761 (765)
. .+++...+|+-..+.
T Consensus 125 ~ve~G~d~FI~v~~~~~ 141 (366)
T 3qis_A 125 HLDRGKDYFLTISGNYL 141 (366)
T ss_dssp EETTSCEEEEEEEEEEC
T ss_pred EEeCCCcEEEEeccccC
Confidence 5 466677777766654
No 55
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=78.00 E-value=6.6 Score=38.39 Aligned_cols=80 Identities=15% Similarity=0.096 Sum_probs=52.0
Q ss_pred ceEEEEEEEEecCCCceeEEEEEeCCCCceEEEEcCeEEEeecCeeEEEEEEEEEecCCCCCCCcEEEEEEEE--C--Cc
Q 004261 674 RVVRYTRELTNVGPARSLYNVTADGPSTVGISVRPKRLLFRTVGEKKRYTVTFVAKNGDQKMGGAAFGSIVWG--N--AQ 749 (765)
Q Consensus 674 ~~~~~~rtvtn~g~~~~ty~~~~~~~~g~~v~v~p~~l~~~~~~~~~~~~vt~~~~~~~~~~~~~~~G~~~~~--~--~~ 749 (765)
...+.+.+++|.|+.+.+++... .|+-+++...|..| ++|++.+++|+++...... -+...+.|+.. + +.
T Consensus 19 ~~~~~~~~i~N~g~~pl~i~~~~-~p~~~~~~~~~~~I---~PG~~g~I~vt~~~~~~~~--~G~~~~~i~v~~~~~~~~ 92 (220)
T 2qsv_A 19 DEGVVRLVVNNTDESDLQVAVVS-LPSFVSLDDRAFRL---QAREPRELNLSLAVPRNMP--PGMKDEPLVLEVTSPETG 92 (220)
T ss_dssp CCCEEEEEEEECSSSCEEEEEEE-CCTTEECSCCEEEE---CSSSCEEEEEEECCCTTCC--SEEEEEEEEEEEECTTTC
T ss_pred CcceEEEEEEeCCCCceEEEecc-CCCceEeeeCccee---CCCCceEEEEEEcchhccc--CCceeeEEEEEEEcCCCC
Confidence 45566788999999988887643 36666554445444 8999999999998765422 23445667664 2 22
Q ss_pred c--EEEEEEEEE
Q 004261 750 H--QVRSPVAFS 759 (765)
Q Consensus 750 ~--~v~~P~~~~ 759 (765)
. ..++||...
T Consensus 93 ~~~~~~i~v~g~ 104 (220)
T 2qsv_A 93 KKAVDSVMVSLP 104 (220)
T ss_dssp CEEEEEEEEEEE
T ss_pred cccccEEEEEEE
Confidence 2 446666553
No 56
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=66.65 E-value=19 Score=31.86 Aligned_cols=51 Identities=14% Similarity=0.113 Sum_probs=36.8
Q ss_pred cceEEEEEEEEecCCCc-eeEEEEEeCCCCceEEEEcCeEEEeecCeeEEEEEEEE
Q 004261 673 QRVVRYTRELTNVGPAR-SLYNVTADGPSTVGISVRPKRLLFRTVGEKKRYTVTFV 727 (765)
Q Consensus 673 ~~~~~~~rtvtn~g~~~-~ty~~~~~~~~g~~v~v~p~~l~~~~~~~~~~~~vt~~ 727 (765)
+...+++.||+|.|..+ ..|++.+.. .|-.+.-. .+.+ ++|+++++++++.
T Consensus 32 G~~~ti~vtV~N~G~~~a~~~~V~lyv-ng~~v~t~--~v~L-a~G~s~tv~f~~~ 83 (127)
T 3idu_A 32 NKLAEYEVHVKNLGGIGVPSTKVRVYI-NGTLYKNW--TVSL-GPKEEKVLTFNWT 83 (127)
T ss_dssp TCCEEEEEEEEECSSSCEEEEEEEEEE-TTEEEEEE--EEEE-CTTCEEEEEEEEC
T ss_pred CCEEEEEEEEEECCCCccCCcEEEEEE-CCEEEeeE--Eecc-CCCCeEEEEEEEE
Confidence 47899999999999865 568887765 34444433 3345 7999998887775
No 57
>1wic_A Hypothetical protein riken cDNA 6030424E15; beta sandwich fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.11.2
Probab=57.95 E-value=29 Score=31.63 Aligned_cols=53 Identities=19% Similarity=0.151 Sum_probs=43.6
Q ss_pred ceEEEEEEEEecCCCceeEEEEEeCCCCceEEEEcCeEEEeecCeeEEEEEEEEEe
Q 004261 674 RVVRYTRELTNVGPARSLYNVTADGPSTVGISVRPKRLLFRTVGEKKRYTVTFVAK 729 (765)
Q Consensus 674 ~~~~~~rtvtn~g~~~~ty~~~~~~~~g~~v~v~p~~l~~~~~~~~~~~~vt~~~~ 729 (765)
..++-..+|+|.++....|++...+|.- ..|.|..=.+ ++|++.+++|++...
T Consensus 35 ~~~~~~l~L~N~s~~~VaFKVKTT~p~~--y~VrP~~GiI-~P~~s~~V~V~lq~~ 87 (152)
T 1wic_A 35 GEKKTLIVLTNVTKNIVAFKVRTTAPEK--YRVKPSNSSC-DPGASIDIIVSPHGG 87 (152)
T ss_dssp SCCCEEEEEEBCSSSCEEEEEEESCTTT--EEEESSEEEE-CTTCEEEEEEEECSS
T ss_pred ceEEEEEEEEcCCCCeEEEEEECCCCCc--eeecCCCcEE-CCCCeEEEEEEecCc
Confidence 3445678999999999999999988865 4668988777 799999999998764
No 58
>1m1s_A WR4; structural genomics, major sperm protein, bioinformatics, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=56.40 E-value=40 Score=29.24 Aligned_cols=50 Identities=16% Similarity=0.225 Sum_probs=41.0
Q ss_pred EEEEEEEecCCCceeEEEEEeCCCCceEEEEcCeEEEeecCeeEEEEEEEEEe
Q 004261 677 RYTRELTNVGPARSLYNVTADGPSTVGISVRPKRLLFRTVGEKKRYTVTFVAK 729 (765)
Q Consensus 677 ~~~rtvtn~g~~~~ty~~~~~~~~g~~v~v~p~~l~~~~~~~~~~~~vt~~~~ 729 (765)
+.+.+|+|.++....|+++...|.-. .|.|..=.+ ++|++.+++|+....
T Consensus 26 ~~~l~L~N~t~~~vAFKVKtT~p~~Y--rVrP~~G~I-~Pg~~~~I~I~~q~~ 75 (116)
T 1m1s_A 26 NSTHNITSESDSRLAFKVKSSNNEHY--RVRPVYGFV-DAKGKSKLDINRLPG 75 (116)
T ss_dssp EEEEEEEECSSSEEEEEEEESCTTTE--EEECSEEEE-CTTCEEEEEEEECSC
T ss_pred EEEEEEECCCCCeEEEEEEecCCCce--EEcCCceEE-CCCCeEEEEEEeCCC
Confidence 55678999999999999998888654 567887666 799999999988764
No 59
>1z9l_A Vesicle-associated membrane protein-associated protein A; VAP-A, cytoplasmic domain, protein binding; HET: MSE; 1.70A {Rattus norvegicus} PDB: 1z9o_A 2rr3_A 3ikk_A
Probab=56.06 E-value=34 Score=30.07 Aligned_cols=53 Identities=21% Similarity=0.270 Sum_probs=43.9
Q ss_pred ceEEEEEEEEecCCCceeEEEEEeCCCCceEEEEcCeEEEeecCeeEEEEEEEEEe
Q 004261 674 RVVRYTRELTNVGPARSLYNVTADGPSTVGISVRPKRLLFRTVGEKKRYTVTFVAK 729 (765)
Q Consensus 674 ~~~~~~rtvtn~g~~~~ty~~~~~~~~g~~v~v~p~~l~~~~~~~~~~~~vt~~~~ 729 (765)
..++-..+|+|.++...-|++...+|.- ..|.|..=.+ ++|++..++|++...
T Consensus 27 ~~~~~~l~L~N~s~~~vaFKVKTT~p~~--y~VrP~~G~i-~P~~s~~v~V~~~~~ 79 (128)
T 1z9l_A 27 DVVTTNLKLQNPSDRKVCFKVKTTAPRR--YCVRPNSGVI-DPGSIVTVSVMLQPF 79 (128)
T ss_dssp SCEEEEEEEECCSSSCEEEEEEESCGGG--EEEESCEEEE-CTTCEEEEEEEECCC
T ss_pred ceEEEEEEEECCCCCeEEEEEECCCCCc--eEEeCCCcEE-CCCCeEEEEEEECcC
Confidence 4567778999999999999999988864 5668988766 799999999998764
No 60
>1row_A SSP-19, MSP-domain protein like family member; beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=55.55 E-value=46 Score=28.40 Aligned_cols=49 Identities=16% Similarity=0.229 Sum_probs=40.6
Q ss_pred EEEEEEEecCCCceeEEEEEeCCCCceEEEEcCeEEEeecCeeEEEEEEEEE
Q 004261 677 RYTRELTNVGPARSLYNVTADGPSTVGISVRPKRLLFRTVGEKKRYTVTFVA 728 (765)
Q Consensus 677 ~~~rtvtn~g~~~~ty~~~~~~~~g~~v~v~p~~l~~~~~~~~~~~~vt~~~ 728 (765)
+.+.+++|.++....|+++..+|.-. .|.|..=.+ ++|++.+++|+...
T Consensus 18 ~~~l~L~N~t~~~vaFKVKtT~p~~y--~VrP~~G~I-~P~~~~~i~I~~q~ 66 (109)
T 1row_A 18 SSTHKLVNGGAEKIVFKIKSSNNNEY--RIAPVFGFV-DPSGSKDVVITRTA 66 (109)
T ss_dssp EEEEEEEECSSSCEEEEEEESCSSSE--EEECSEEEE-CTTEEEEEEEEECS
T ss_pred eEEEEEEcCCCCeEEEEEEeCCCCce--EEcCCceEE-CCCCeEEEEEEeCC
Confidence 35678999999999999999888654 567887766 79999999988776
No 61
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A*
Probab=55.46 E-value=56 Score=36.74 Aligned_cols=65 Identities=14% Similarity=0.095 Sum_probs=44.6
Q ss_pred CCCceeeeccCcceEEEEEEEEecCCCceeE-EEEEeCCCCceEEEEcCeEEEeecCeeEEEEEEEEEecC
Q 004261 662 NYPSFSVLFGDQRVVRYTRELTNVGPARSLY-NVTADGPSTVGISVRPKRLLFRTVGEKKRYTVTFVAKNG 731 (765)
Q Consensus 662 n~ps~~~~~~~~~~~~~~rtvtn~g~~~~ty-~~~~~~~~g~~v~v~p~~l~~~~~~~~~~~~vt~~~~~~ 731 (765)
..|.+++.. +++.+++.+|+|-+..+..- ++++..|.+.+++. ....+ ++|++.+++|+|+++..
T Consensus 363 ~~~~~~~~~--g~~~~~~~~vtn~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~g~~~t~~~~vt~~~~ 428 (601)
T 1w8o_A 363 TIPDVALEP--GQQVTVPVAVTNQSGIAVPKPSLQLDASPDWQVQG--SVEPL-MPGRQAKGQVTITVPAG 428 (601)
T ss_dssp ECCCEEECT--TCEEEEEEEEECCSSSCBSSCEEEEECCTTSEEEE--EECCB-CTTCEEEEEEEEECCTT
T ss_pred cCccceecC--CceeEEEEEEECCCceeccCceEEEecCCCcEEec--ccccc-CCCCceEEEEEEecCCC
Confidence 346666553 36888999999976543322 44466688888876 23444 68999999888888654
No 62
>2kq1_A BH0266 protein; solution NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; NMR {Bacillus halodurans}
Probab=55.07 E-value=4.1 Score=35.73 Aligned_cols=55 Identities=18% Similarity=0.186 Sum_probs=35.7
Q ss_pred EEEEEEEecCCCceeEEEEEe-CCCCceEEEEcCeEEEe-ecCeeEEEEEEEEEecC
Q 004261 677 RYTRELTNVGPARSLYNVTAD-GPSTVGISVRPKRLLFR-TVGEKKRYTVTFVAKNG 731 (765)
Q Consensus 677 ~~~rtvtn~g~~~~ty~~~~~-~~~g~~v~v~p~~l~~~-~~~~~~~~~vt~~~~~~ 731 (765)
.+..-++|.+.+..+..+.+. .|.|+++++.|++++++ ..-.+++|.|+++....
T Consensus 56 ~~~vDLs~l~~G~~~vpv~v~~lp~~v~v~v~P~~V~V~i~~~~~k~~pV~v~~~g~ 112 (119)
T 2kq1_A 56 EVFVDLTEAGEGSHTVDVEHRGFPGDLAVTVEPRMARVQLEERQTVSVPVTVEMINL 112 (119)
T ss_dssp EEEEECTTCCBEEEEEECEEESSCTTSEEEESCCEEEEEEESCCCCCCCCCCCCCCC
T ss_pred EEEEECccCCCCeEEEEEEEecCCCCeEEEEcCCEEEEEEEEEEEEEEEEEEEECCC
Confidence 344455666654444455566 68999999999998774 34455677776665543
No 63
>2cri_A Vesicle-associated membrane protein-associated protein A; VAP-A, VAP-33, beta sandwitch fold, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=48.82 E-value=48 Score=29.90 Aligned_cols=53 Identities=21% Similarity=0.274 Sum_probs=43.5
Q ss_pred ceEEEEEEEEecCCCceeEEEEEeCCCCceEEEEcCeEEEeecCeeEEEEEEEEEe
Q 004261 674 RVVRYTRELTNVGPARSLYNVTADGPSTVGISVRPKRLLFRTVGEKKRYTVTFVAK 729 (765)
Q Consensus 674 ~~~~~~rtvtn~g~~~~ty~~~~~~~~g~~v~v~p~~l~~~~~~~~~~~~vt~~~~ 729 (765)
..++-..+|+|.++...-|++...+|.-. .|.|..=.+ +++++..++|++...
T Consensus 31 ~~~~~~l~L~N~s~~~VaFKVKTT~p~~y--~VrP~~GiI-~P~~s~~v~V~l~~~ 83 (147)
T 2cri_A 31 DVVTTNLKLQNPSDRKVCFKVKTTAPRRY--CVRPNSGII-DPGSIVTVSVMLQPF 83 (147)
T ss_dssp SCCCEEEEEECCSSSCEEEEEEESCTTSE--EEESSEEEC-CTTCEEEEEEEECCC
T ss_pred ceEEEEEEEECCCCCcEEEEEECCCCccE--EEcCCCcEE-CCCCeEEEEEEECCC
Confidence 45556788999999999999999988754 567988666 799999999998764
No 64
>1msp_A MSP, major sperm protein; cytoskeletal protein, cell motility protein; 2.50A {Ascaris suum} SCOP: b.1.11.2 PDB: 3msp_A 2bvu_A 2msp_A 1grw_A
Probab=47.78 E-value=58 Score=28.50 Aligned_cols=51 Identities=22% Similarity=0.219 Sum_probs=42.4
Q ss_pred eEEEEEEEEecCCCceeEEEEEeCCCCceEEEEcCeEEEeecCeeEEEEEEEEE
Q 004261 675 VVRYTRELTNVGPARSLYNVTADGPSTVGISVRPKRLLFRTVGEKKRYTVTFVA 728 (765)
Q Consensus 675 ~~~~~rtvtn~g~~~~ty~~~~~~~~g~~v~v~p~~l~~~~~~~~~~~~vt~~~ 728 (765)
..+-..+|+|.++...-|+++..+|.-. .|.|..=.+ ++|++..++|++..
T Consensus 26 ~~~~~l~l~N~s~~~vaFKVKTT~p~~y--~VrP~~Gii-~P~~s~~v~V~~q~ 76 (126)
T 1msp_A 26 KHTYHIKITNAGGRRIGWAIKTTNMRRL--SVDPPCGVL-DPKEKVLMAVSCDT 76 (126)
T ss_dssp CCCEEEEEEECSSSCEEEEEEESCTTTE--EEESCEEEE-CTTCEEEEEEEECC
T ss_pred ceEEEEEEECCCCCeEEEEEEcCCCCcE--EEECCCeEE-CCCCEEEEEEEecC
Confidence 4455678999999999999999888754 667988777 79999999998876
No 65
>3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A*
Probab=45.45 E-value=2.1e+02 Score=33.69 Aligned_cols=161 Identities=17% Similarity=0.144 Sum_probs=84.4
Q ss_pred eeEEeccccchhhhhhhHHHHHHhhCCCCC-HHHHHHHHHhcceeccCCCCCCCCCCCCCCCCCCcCCCcccCccccCCC
Q 004261 537 KFNIMSGTSMSCPHLSGVAALLKAAHPDWS-PSAIKSALMTTAYVVDNTKSPLHDAADGRLSTPWAHGSGHVNPQKAISP 615 (765)
Q Consensus 537 ~y~~~sGTSmAaP~VAG~aALl~~~~P~~s-p~~ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~G~G~vd~~~Al~~ 615 (765)
-...++|..++-|.+.-+.|+|..++|.-- ...|-++|.--..|-...-..+.......|... .|. . ..
T Consensus 618 VVVl~sG~pv~m~w~~~v~AIL~aw~pGqegG~AiAdVLfG~vNPSGkLP~T~p~~~~d~P~~~-~~~--~-------~~ 687 (845)
T 3abz_A 618 VIVNQSGTPVEFPWLEDANALVQAWYGGNELGNAIADVLYGDVVPNGKLSLSWPFKLQDNPAFL-NFK--T-------EF 687 (845)
T ss_dssp EEEEECSSCCCCTTGGGCSEEEECCCCCTTHHHHHHHHHTTSSCCCCCCSSCBCSSGGGSTTTT-SCS--C-------BT
T ss_pred EEEEeCCCcccCcchhccCeEEEcCCCcHHHHHHHHHHhcCCcCCCCCCceeeeCchhhCCccc-cCC--C-------CC
Confidence 456789999999999999999999999875 567777776655442111000000000011100 111 0 01
Q ss_pred C-ccccCCh-hhHHHhhhccCCChheeeeeccCCcccccCCCCCCCCCCCCceeee--ccC--cceEEEEEEEEecC-CC
Q 004261 616 G-LVYDAST-EDYVAFLCSLGYTIEHVQAIVKRPNITCTRKFNTPGELNYPSFSVL--FGD--QRVVRYTRELTNVG-PA 688 (765)
Q Consensus 616 g-lv~~~~~-~d~~~~l~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~ln~ps~~~~--~~~--~~~~~~~rtvtn~g-~~ 688 (765)
+ ..|.++. -+|.-|.- . .+...-.-..-|.|-+|... ... ....+++.+|||+| +.
T Consensus 688 g~~~y~eg~~vgYR~y~~------~-----------~~~plfPFG~GLSYTtF~ys~~~l~v~~~~~~v~v~V~NtG~~~ 750 (845)
T 3abz_A 688 GRVIYGEDIFVGYRYYEK------L-----------QRKVAFPFGYGLSYTTFELDISDFKVTDDKIAISVDVKNTGDKF 750 (845)
T ss_dssp TEEECTTTTCCTHHHHHH------H-----------TCCCSBCTTCCBCSSCEEEEEEEEEECSSEEEEEEEEEECCSSC
T ss_pred CceeccCCccCCCcchhc------C-----------CCceeecccCCCcceeEEEecccccccCCeEEEEEEEEECCcCC
Confidence 1 2233321 12332210 0 01111123345677777655 321 35788999999999 76
Q ss_pred ceeEEEEE--eCCCCceEEEEcC-------eEEEeecCeeEEEEEEEE
Q 004261 689 RSLYNVTA--DGPSTVGISVRPK-------RLLFRTVGEKKRYTVTFV 727 (765)
Q Consensus 689 ~~ty~~~~--~~~~g~~v~v~p~-------~l~~~~~~~~~~~~vt~~ 727 (765)
+..-.+.+ ..|.+- +. .|. ++.+ ++||+++++++++
T Consensus 751 ~G~eVvQlYv~~~~~~-~~-~P~k~L~gF~kv~L-~pGes~~V~~~l~ 795 (845)
T 3abz_A 751 AGSEVVQVYFSALNSK-VS-RPVKELKGFEKVHL-EPGEKKTVNIDLE 795 (845)
T ss_dssp CEEEEEEEEEEESSCS-SC-CCSCEEEEEEEEEE-CTTCEEEEEEEEE
T ss_pred CcceeeeeeEeCCCCC-cc-hhhheeccceeEEE-CCCCEEEEEEEeC
Confidence 55444333 333221 11 222 2334 7999999999998
No 66
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=43.63 E-value=56 Score=31.59 Aligned_cols=54 Identities=13% Similarity=0.134 Sum_probs=35.4
Q ss_pred ceEEEEEEEEecCCCceeEEEEEeCCCCceEEEEcCeEEEeecCeeEEEEEEEEEec
Q 004261 674 RVVRYTRELTNVGPARSLYNVTADGPSTVGISVRPKRLLFRTVGEKKRYTVTFVAKN 730 (765)
Q Consensus 674 ~~~~~~rtvtn~g~~~~ty~~~~~~~~g~~v~v~p~~l~~~~~~~~~~~~vt~~~~~ 730 (765)
...+.+.+++|+|+.+...+- +...-|-. ++++..-.+ ++||+.+++|+++...
T Consensus 134 ~~~~~~f~i~N~G~~pL~I~~-v~~scgct-~~~~~~~~i-~PGe~~~i~v~~~~~~ 187 (220)
T 2qsv_A 134 ETTKAAIEIRNVGAGPLRLHS-VTTRNPAL-TAVPDRTEI-KPGGSTLLRIAVDPQV 187 (220)
T ss_dssp SCEEEEEEEEECSSSCEEEEE-EEECSTTE-EEEESCSEE-CTTCEEEEEEEECHHH
T ss_pred CeEEEEEEEEECCCCCEEEEE-EEeCCCCE-eeecCCccC-CCCCEEEEEEEEecCC
Confidence 566778899999998776542 22233332 223333344 7999999999998754
No 67
>1wgl_A TOLL-interacting protein; CUE domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, immune system; NMR {Homo sapiens} SCOP: a.5.2.4
Probab=38.29 E-value=22 Score=26.82 Aligned_cols=36 Identities=17% Similarity=0.068 Sum_probs=27.4
Q ss_pred cchhhhhhhHHHHHHhhCCCCCHHHHHHHHHhccee
Q 004261 545 SMSCPHLSGVAALLKAAHPDWSPSAIKSALMTTAYV 580 (765)
Q Consensus 545 SmAaP~VAG~aALl~~~~P~~sp~~ik~~L~~TA~~ 580 (765)
|-..|..--....|++.||+++...|+.+|...-..
T Consensus 3 ~~~~~~~ee~l~~L~emFP~ld~~~I~~vL~a~~gd 38 (59)
T 1wgl_A 3 SGSSGCSEEDLKAIQDMFPNMDQEVIRSVLEAQRGN 38 (59)
T ss_dssp SCSSSSCHHHHHHHHHHCSSSCHHHHHHHHTTTTTC
T ss_pred CCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHcCCC
Confidence 333444555678899999999999999999876544
No 68
>3q48_A Chaperone CUPB2; IG fold, periplasmic chaperone; 2.50A {Pseudomonas aeruginosa}
Probab=34.94 E-value=3.4e+02 Score=26.75 Aligned_cols=53 Identities=13% Similarity=0.081 Sum_probs=36.9
Q ss_pred ceEEEEEEEEecCCCceeEEEE--EeCC------C--CceEEEEcCeEEEeecCeeEEEEEEEEEe
Q 004261 674 RVVRYTRELTNVGPARSLYNVT--ADGP------S--TVGISVRPKRLLFRTVGEKKRYTVTFVAK 729 (765)
Q Consensus 674 ~~~~~~rtvtn~g~~~~ty~~~--~~~~------~--g~~v~v~p~~l~~~~~~~~~~~~vt~~~~ 729 (765)
.....+.+|+|.++. .|.+. ++.- + ...+.|+|..+.+ ++|+++.+.|.....
T Consensus 42 ~~k~~sl~l~N~~~~--P~LvQsWid~~~~~~~p~~~~~pfivtPPl~rl-~pg~~q~lRI~~~~~ 104 (257)
T 3q48_A 42 SEREVTLRVSNTSGT--PVLAQAWIDDGRQDVPPEELQVPFSVTPAVTRV-EPNGGAVLRIAYLKA 104 (257)
T ss_dssp TCSEEEEEEEECSSS--CEEEEEEEESSCCSSCGGGGCCSEEEESSEEEE-CTTEEEEEEEEECCC
T ss_pred CCcEEEEEEEeCCCC--eEEEEEEEEcCCCccCcccccCCEEEcCCEEEE-CCCCceEEEEEECCC
Confidence 445577889998865 45443 3321 1 2347889999999 799999999975543
No 69
>2x41_A Beta-glucosidase; hydrolase, TIM barrel fold, fibronectin type III fold; HET: BGC; 2.05A {Thermotoga neapolitana} PDB: 2x40_A* 2x42_A*
Probab=34.05 E-value=36 Score=39.52 Aligned_cols=68 Identities=18% Similarity=0.241 Sum_probs=40.3
Q ss_pred CCCCCceeeeccC----cceEEEEEEEEecCCCceeE--EEEEeCCCCceEEEEcC-e------EEEeecCeeEEEEEEE
Q 004261 660 ELNYPSFSVLFGD----QRVVRYTRELTNVGPARSLY--NVTADGPSTVGISVRPK-R------LLFRTVGEKKRYTVTF 726 (765)
Q Consensus 660 ~ln~ps~~~~~~~----~~~~~~~rtvtn~g~~~~ty--~~~~~~~~g~~v~v~p~-~------l~~~~~~~~~~~~vt~ 726 (765)
-|.|-+|...... ....+++.+|||+|+.+..- .+-+..|.+- +. .|. + +...++||++++++++
T Consensus 597 GLSYTtF~ys~~~~~~~~~~~~v~v~VtNtG~~~G~eVvQlYv~~~~~~-~~-~P~k~L~gF~kv~~L~pGes~~V~~~l 674 (721)
T 2x41_A 597 GLSYTTFEYSDLNVSFDGETLRVQYRIENTGGRAGKEVSQVYIKAPKGK-ID-KPFQELKAFHKTRLLNPGESEEVVLEI 674 (721)
T ss_dssp CBCSSCEEEEEEEEEECSSEEEEEEEEEECSSSCBCCEEEEEEECCCSS-SC-CCSCEEEEEEECCCBCTTCEEEEEEEE
T ss_pred CCCcceeEeeceEeecCCCeEEEEEEEEECCCCCCcEEeeEEEccCCCC-CC-CchHHhhcccccccCCCCCeEEEEEEE
Confidence 4556555544321 35788999999999865443 3334444321 11 232 1 2023799999999988
Q ss_pred EEe
Q 004261 727 VAK 729 (765)
Q Consensus 727 ~~~ 729 (765)
+..
T Consensus 675 ~~~ 677 (721)
T 2x41_A 675 PVR 677 (721)
T ss_dssp EGG
T ss_pred CHH
Confidence 864
No 70
>3lyw_A YBBR family protein; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 1.90A {Desulfitobacterium hafniense} PDB: 2kpu_A 2l5n_A
Probab=33.62 E-value=33 Score=28.25 Aligned_cols=38 Identities=16% Similarity=0.310 Sum_probs=29.5
Q ss_pred EEEEEEEEecCCCceeEEEEEeCCCCceE-EEEcCeEEE
Q 004261 676 VRYTRELTNVGPARSLYNVTADGPSTVGI-SVRPKRLLF 713 (765)
Q Consensus 676 ~~~~rtvtn~g~~~~ty~~~~~~~~g~~v-~v~p~~l~~ 713 (765)
.....-+.++.++..+|.+++..|+|+++ .++|+++++
T Consensus 43 i~A~VDLsg~~~G~~~~~V~v~~P~G~~lv~vsP~~V~~ 81 (90)
T 3lyw_A 43 LFAYVDLSGSEPGEHDYEVKVEPIPNIKIVEISPRVVTL 81 (90)
T ss_dssp CEEEEECTTCCSEEEEEECEECCCTTEEEEEEESSEEEE
T ss_pred EEEEEECcCCCCCcEeEEEEEECCCCCEEEEEccceEEE
Confidence 34445677777777889999999999865 788998876
No 71
>3zyz_A Beta-D-glucoside glucohydrolase; HET: NAG BGC; 2.10A {Hypocrea jecorina} PDB: 3zz1_A* 4i8d_A*
Probab=32.12 E-value=92 Score=35.98 Aligned_cols=53 Identities=21% Similarity=0.231 Sum_probs=34.4
Q ss_pred ceEEEEEEEEecCCCceeEEEEE--eCCCCceEEEEcC-------eEEEeecCeeEEEEEEEEEe
Q 004261 674 RVVRYTRELTNVGPARSLYNVTA--DGPSTVGISVRPK-------RLLFRTVGEKKRYTVTFVAK 729 (765)
Q Consensus 674 ~~~~~~rtvtn~g~~~~ty~~~~--~~~~g~~v~v~p~-------~l~~~~~~~~~~~~vt~~~~ 729 (765)
...+++.+|||+|+....-.+.+ ..|.+. + ..|. ++.+ ++||+++++++++..
T Consensus 613 ~~~~vsv~VtNtG~~~G~EVvQlYv~~~~~~-~-~~P~k~L~gF~kv~L-~pGes~~V~~~l~~~ 674 (713)
T 3zyz_A 613 NVATVTVDIANSGQVTGAEVAQLYITYPSSA-P-RTPPKQLRGFAKLNL-TPGQSGTATFNIRRR 674 (713)
T ss_dssp EEEEEEEEEEECSSSCEEEEEEEEEECCTTS-S-SCCSCEEEEEEEEEE-CTTCEEEEEEEEEGG
T ss_pred CeEEEEEEEEeCCCCccceeeeeeeecCCCC-C-CchhHHhhhccccee-CCCCeEEEEEEEcHH
Confidence 46788999999998765544443 344321 1 1221 2334 799999999998864
No 72
>2l0d_A Cell surface protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Methanosarcina acetivorans}
Probab=30.01 E-value=1.5e+02 Score=25.37 Aligned_cols=25 Identities=24% Similarity=0.283 Sum_probs=18.0
Q ss_pred cceEEEEEEEEecCCCc-eeEEEEEe
Q 004261 673 QRVVRYTRELTNVGPAR-SLYNVTAD 697 (765)
Q Consensus 673 ~~~~~~~rtvtn~g~~~-~ty~~~~~ 697 (765)
+...+++.+|+|.|... ..+++.+.
T Consensus 18 ~~~~ti~atVkN~G~~~a~~~~V~ly 43 (114)
T 2l0d_A 18 NTVNTMTATIENQGNKDSTSFNVSLL 43 (114)
T ss_dssp TSEEEEEEEEEECSSSCBCCEEEEEE
T ss_pred CCeEEEEEEEEECCCCCCCCEEEEEE
Confidence 47889999999999753 34555443
No 73
>3sd2_A Putative member of DUF3244 protein family; immunoglobulin-like beta-sandwich, structural genomics, JOIN for structural genomics; HET: MSE; 1.40A {Bacteroides thetaiotaomicron}
Probab=28.39 E-value=2.1e+02 Score=23.94 Aligned_cols=66 Identities=18% Similarity=0.168 Sum_probs=43.3
Q ss_pred ceeeeccCcceEEEEEEEEecCCCceeEEEEEeCCCCceEEEEcCeEEEeecCeeEEEEEEEEEecCCCCCCCcEEEEEE
Q 004261 665 SFSVLFGDQRVVRYTRELTNVGPARSLYNVTADGPSTVGISVRPKRLLFRTVGEKKRYTVTFVAKNGDQKMGGAAFGSIV 744 (765)
Q Consensus 665 s~~~~~~~~~~~~~~rtvtn~g~~~~ty~~~~~~~~g~~v~v~p~~l~~~~~~~~~~~~vt~~~~~~~~~~~~~~~G~~~ 744 (765)
.+++.|.+ ....+++||+|-......|.=.+..|.- ++ +.+ ...++-.|+|.+... ..++.|..+
T Consensus 35 vlsV~F~~-~~~~vTItItNe~TG~~VYs~~~s~p~~--i~-----IdL-nge~sG~Y~IeI~~~------~~~LtG~F~ 99 (101)
T 3sd2_A 35 ILNVSFGR-AKDYAIITVTNKATGEIVHSKTYHNTSI--VM-----IDM-SSCEKGEYTIHIILN------DCLLEGTFT 99 (101)
T ss_dssp EEEEEESS-CCSCEEEEEEETTTCCEEEEEEESSCSE--EE-----EEC-TTSCSEEEEEEEEET------TEEEEEEEE
T ss_pred EEEEEecc-CCCcEEEEEEECCCCcEEEEEeccCCcE--EE-----EEc-CCCcCceEEEEEEeC------CcEEEEEEE
Confidence 56666653 4556788999987778888887766542 22 223 345578888888754 346778765
Q ss_pred E
Q 004261 745 W 745 (765)
Q Consensus 745 ~ 745 (765)
.
T Consensus 100 i 100 (101)
T 3sd2_A 100 V 100 (101)
T ss_dssp E
T ss_pred e
Confidence 3
No 74
>4ep8_B Urease subunit beta; alpha-beta barrel, nickel metalloenzyme, hydrolase, radiatio; HET: KCX; 1.55A {Enterobacter aerogenes} PDB: 1a5l_B 1a5k_B 1a5n_B 1a5o_B 1ef2_B* 1ejr_B* 1ejs_B* 1ejt_B* 1eju_B* 1ejv_B* 1a5m_B* 1ejw_B* 1ejx_B* 4epb_B* 4epd_B* 4epe_B* 1fwa_B* 1fwb_B* 1fwc_B* 1fwd_B* ...
Probab=23.95 E-value=73 Score=26.54 Aligned_cols=17 Identities=12% Similarity=-0.029 Sum_probs=13.6
Q ss_pred ceEEEEEEEEecCCCce
Q 004261 674 RVVRYTRELTNVGPARS 690 (765)
Q Consensus 674 ~~~~~~rtvtn~g~~~~ 690 (765)
+..+++.+|+|+|+.+.
T Consensus 18 gr~~~~l~V~NtGDRPI 34 (101)
T 4ep8_B 18 GRATCRVVVENHGDRPI 34 (101)
T ss_dssp TCCEEEEEEEECSSSCE
T ss_pred CCCEEEEEEEeCCCcce
Confidence 55677889999999764
No 75
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=23.95 E-value=2.9e+02 Score=23.89 Aligned_cols=54 Identities=9% Similarity=0.135 Sum_probs=36.4
Q ss_pred cceEEEEEEEEecCCCce--------eEEEEEeCCCCceEE---------EEcCeEEEeecCeeEEEEEEEE
Q 004261 673 QRVVRYTRELTNVGPARS--------LYNVTADGPSTVGIS---------VRPKRLLFRTVGEKKRYTVTFV 727 (765)
Q Consensus 673 ~~~~~~~rtvtn~g~~~~--------ty~~~~~~~~g~~v~---------v~p~~l~~~~~~~~~~~~vt~~ 727 (765)
+....++.+|+|.++.+. .|.+.+....|-.|- -.....++ ++||+++|+.++.
T Consensus 17 g~~v~~~ltv~N~s~~~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl-~pGE~~~f~~~w~ 87 (120)
T 3isy_A 17 PEQIKFNMSLKNQSERAIEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTL-ESGETYDFSDVWK 87 (120)
T ss_dssp SSCEEEEEEEEECSSSCEEEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEE-CTTCEEEEEEEES
T ss_pred CCeEEEEEEEEcCCCCcEEEEeCCCCEEEEEEECCCCCEEEEccccchhhhhhceEEE-CCCCEEEEEEEeC
Confidence 468888999999998654 345556555554332 01223456 7999999999887
No 76
>1ni7_A ER75, hypothetical protein YGDK; RD-structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Escherichia coli} SCOP: d.224.1.1
Probab=23.94 E-value=50 Score=30.18 Aligned_cols=29 Identities=21% Similarity=0.280 Sum_probs=25.4
Q ss_pred cccchhhhhhhHHHHHHhhCCCCCHHHHHH
Q 004261 543 GTSMSCPHLSGVAALLKAAHPDWSPSAIKS 572 (765)
Q Consensus 543 GTSmAaP~VAG~aALl~~~~P~~sp~~ik~ 572 (765)
|-| =|+.|-|++|||.+.+-..||+||.+
T Consensus 81 adS-DA~IvkGL~AlL~~~~~G~tp~eIl~ 109 (155)
T 1ni7_A 81 GDS-EGRIVRGLLAVLLTAVEGKTAAELQA 109 (155)
T ss_dssp EEE-SSHHHHHHHHHHHHHTTTCCHHHHHH
T ss_pred eCC-ccHHHHHHHHHHHHHHcCCCHHHHHh
Confidence 444 47999999999999999999999964
No 77
>1yew_A Particulate methane monooxygenase, B subunit; membrane protein, beta barrel, oxidoreductase; 2.80A {Methylococcus capsulatus} PDB: 3rgb_A
Probab=22.28 E-value=87 Score=32.52 Aligned_cols=54 Identities=24% Similarity=0.338 Sum_probs=33.7
Q ss_pred cceEEEEEEEEecCCCcee---EE-EEEe------------CCCCc----eEEEEcCeEEEeecCeeEEEEEEEEE
Q 004261 673 QRVVRYTRELTNVGPARSL---YN-VTAD------------GPSTV----GISVRPKRLLFRTVGEKKRYTVTFVA 728 (765)
Q Consensus 673 ~~~~~~~rtvtn~g~~~~t---y~-~~~~------------~~~g~----~v~v~p~~l~~~~~~~~~~~~vt~~~ 728 (765)
+.+.+++.+|||.|+.+.. |+ +.+. -|..+ .++|+|++- + .+||+++++|+++-
T Consensus 263 gR~l~~~~~VtN~g~~pvrlgeF~tA~vrFln~~~~~~~~~~P~~lla~~gL~vsd~~p-I-~PGETr~~~v~a~d 336 (382)
T 1yew_A 263 GRAMRMKLTITNHGNSPIRLGEFYTASVRFLDSDVYKDTTGYPEDLLAEDGLSVSDNSP-L-APGETRTVDVTASD 336 (382)
T ss_dssp CSEEEEEEEEEECSSSCEEEEEEECSSCEEECTTTCCCCSCCCGGGEETTCEEESCCSC-B-CTTCEEEEEEEEEC
T ss_pred CcEEEEEEEEEcCCCCceEeeeEEeccEEEeCCcccccCCCChHHhhccCCceeCCCCC-c-CCCceeEEEEEeeh
Confidence 4788999999999987642 21 2211 12100 135555552 1 79999999988774
No 78
>3hrz_B Cobra venom factor; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Naja kaouthia} PDB: 3frp_G* 3hs0_B*
Probab=20.89 E-value=2.1e+02 Score=28.19 Aligned_cols=65 Identities=12% Similarity=0.023 Sum_probs=42.5
Q ss_pred CCCCCceeeeccCcceEEEEEEEEecCCCceeEEEEEeCCCCceEEEE-----cCeEEEeecCeeEEEEEEEEE
Q 004261 660 ELNYPSFSVLFGDQRVVRYTRELTNVGPARSLYNVTADGPSTVGISVR-----PKRLLFRTVGEKKRYTVTFVA 728 (765)
Q Consensus 660 ~ln~ps~~~~~~~~~~~~~~rtvtn~g~~~~ty~~~~~~~~g~~v~v~-----p~~l~~~~~~~~~~~~vt~~~ 728 (765)
++|+|...+. +....+..+|-|..+.....++.+...+++..... ..++.+ ++++.+++...+.+
T Consensus 85 ~~~LP~sv~r---GE~~~l~~~V~Ny~~~~~~v~V~l~~~~~~~~~~~~~~~~~~~v~v-~a~~~~~v~f~i~p 154 (252)
T 3hrz_B 85 DLQMPYSVVK---NEQVEIRAILHNYVNEDIYVRVELLYNPAFCSASTKGQRYRQQFPI-KALSSRAVPFVIVP 154 (252)
T ss_dssp EECCCSCEET---TCCEEEEEEEEECSSSCEEEEEEECCCTTEEESCCSSCCEEEEEEE-CTTEEEEEEEEEEE
T ss_pred EcCCCcEEee---CCEEEEEEEEEcccCceEEEEEEEEcCCceEeecCCCCceEEEEEE-CCCCeEEEEEEEEe
Confidence 5788876543 46788888999998887777777766555433211 123555 67777776666654
No 79
>2hr0_B Complement C3 alpha' chain; complement component C3B, immune system; HET: THC; 2.26A {Homo sapiens} PDB: 2icf_B* 2wii_B* 2win_B* 3g6j_B 3l5n_B* 2a73_B* 2i07_B* 2xwj_B* 2xwb_B* 2a74_C* 2ice_C* 2qki_C* 3l3o_F* 3nms_C* 3nsa_C* 3ohx_C* 3t4a_C 2ice_B* 3l3o_B* 3nms_B* ...
Probab=20.36 E-value=1.4e+02 Score=35.59 Aligned_cols=66 Identities=12% Similarity=-0.015 Sum_probs=48.7
Q ss_pred CCCCCCceeeeccCcceEEEEEEEEecCC-CceeEEEEEeCCCCceEEE-----EcCeEEEeecCeeEEEEEEEEE
Q 004261 659 GELNYPSFSVLFGDQRVVRYTRELTNVGP-ARSLYNVTADGPSTVGISV-----RPKRLLFRTVGEKKRYTVTFVA 728 (765)
Q Consensus 659 ~~ln~ps~~~~~~~~~~~~~~rtvtn~g~-~~~ty~~~~~~~~g~~v~v-----~p~~l~~~~~~~~~~~~vt~~~ 728 (765)
.++|+|.+... +....+..+|.|..+ ...++++.+...+++.+.- .+.++++ ++++++++.+.+.+
T Consensus 83 v~~~LP~~v~~---GD~~~i~~~v~N~~~~~~~~v~v~l~~~~~~~~~~~~~~~~~~~v~l-~~~~~~~v~f~i~~ 154 (915)
T 2hr0_B 83 IDLRLPYSVVR---NEQVEIRAVLYNYRQNQELKVRVELLHNPAFCSLATTKRRHQQTVTI-PPKSSLSVPYVIVP 154 (915)
T ss_dssp EEEECCSEEET---TCCEEEEEEEEECCSSCCEEEEEEECCCTTEECSCCSSSCEEEEEEE-CTTEEEEEEEEEEE
T ss_pred EEccCCCEEec---CcEEEEEEEEEcCCCCeeEEEEEEEecCCceEeecCCCCcceeEEEE-CCCCeEEEEEEEEE
Confidence 36788876543 468888899999999 8889999988776655421 1346777 68888888887775
No 80
>3g0m_A Cysteine desulfuration protein SUFE; YNHA, csgid, national I of allergy and infectious diseases, niaid, hydrolase, struc genomics; 1.76A {Salmonella typhimurium LT2} SCOP: d.224.1.1 PDB: 1mzg_A
Probab=20.29 E-value=48 Score=29.80 Aligned_cols=33 Identities=15% Similarity=0.165 Sum_probs=27.4
Q ss_pred EEeccccchhhhhhhHHHHHHhhCCCCCHHHHHH
Q 004261 539 NIMSGTSMSCPHLSGVAALLKAAHPDWSPSAIKS 572 (765)
Q Consensus 539 ~~~sGTSmAaP~VAG~aALl~~~~P~~sp~~ik~ 572 (765)
..+.|-| =|+.|-|++|||.+.+-..||+||.+
T Consensus 70 l~f~adS-DA~IvkGl~alL~~~~~G~tp~eIl~ 102 (141)
T 3g0m_A 70 IELQGDS-DAAIVKGLMAVVFILYHQMTAQDIVH 102 (141)
T ss_dssp EEEEEEE-SSHHHHHHHHHHHHHHTTCBHHHHHH
T ss_pred EEEEecC-ccHHHHHHHHHHHHHHcCCCHHHHHh
Confidence 3445666 47999999999999999999999864
No 81
>2l04_A Major tail protein V; bacteriophage lambda, phage tail, GPV, IG-like domain, viral; NMR {Enterobacteria phage lambda}
Probab=20.16 E-value=74 Score=26.16 Aligned_cols=27 Identities=26% Similarity=0.470 Sum_probs=20.4
Q ss_pred eEEEEcCeEEEeecCeeEEEEEEEEEec
Q 004261 703 GISVRPKRLLFRTVGEKKRYTVTFVAKN 730 (765)
Q Consensus 703 ~v~v~p~~l~~~~~~~~~~~~vt~~~~~ 730 (765)
.|++.|..+++ ..|++..++.++.+..
T Consensus 8 ~i~l~~~~~~l-~vG~t~~L~atv~P~~ 34 (91)
T 2l04_A 8 GMTVTPASTSV-VKGQSTTLTVAFQPEG 34 (91)
T ss_dssp CEEEECCCEEE-ETTCEEEEEEEECCSS
T ss_pred EEEEeCCceEE-EcCCEEEEEEEEeccc
Confidence 35677888888 6888888888777544
Done!