BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 004268
(764 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 87/220 (39%), Positives = 123/220 (55%), Gaps = 4/220 (1%)
Query: 497 RITFEEMIEATEDFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQT 556
R + E+ A+++F K +G GG+G VY+ +L+ G LVA+K+L + E + L+ FQT
Sbjct: 27 RFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRL-KEERXQGGELQ-FQT 84
Query: 557 EARLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVE-LDWTKRVNI 615
E ++S HRN+++L GFC+ L+Y YM GS+ LR E+ LDW KR I
Sbjct: 85 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRI 144
Query: 616 VKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLL-HPDSSNRTLVV 674
A L+YLH C P I+HRD EA V DFGLA+L+ + D V
Sbjct: 145 ALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVR 204
Query: 675 GTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTD 714
GT G+IAPE T +EK DV+ +GV+ LE++ G D
Sbjct: 205 GTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFD 244
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 85/220 (38%), Positives = 119/220 (54%), Gaps = 4/220 (1%)
Query: 497 RITFEEMIEATEDFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQT 556
R + E+ A+++F K +G GG+G VY+ +L+ G LVA+K+L T+ FQT
Sbjct: 19 RFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGEL--QFQT 76
Query: 557 EARLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVE-LDWTKRVNI 615
E ++S HRN+++L GFC+ L+Y YM GS+ LR E+ LDW KR I
Sbjct: 77 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRI 136
Query: 616 VKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLL-HPDSSNRTLVV 674
A L+YLH C P I+HRD EA V DFGLA+L+ + D V
Sbjct: 137 ALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVR 196
Query: 675 GTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTD 714
G G+IAPE T +EK DV+ +GV+ LE++ G D
Sbjct: 197 GXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFD 236
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 121/368 (32%), Positives = 171/368 (46%), Gaps = 31/368 (8%)
Query: 39 IGALSKLEKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTGTIPSEXXXXXXXXXXXX 98
+G S L+ L +S N L+G I + LK+L++S N+ G IP
Sbjct: 216 LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIP-------------- 261
Query: 99 XXXXXXXXXPLEFGNLKDLDQLRLQGNKLDGLIPSSI-GNLTNLTYLDLSLNQLSGRLPQ 157
PL LK L L L NK G IP + G LT LDLS N G +P
Sbjct: 262 ---------PLP---LKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPP 309
Query: 158 EVGNLKNLKSLFLDNNHLSGPIP-STLYHLNQLATLCLGYNKLVGPVTKEVGNMK-NLDR 215
G+ L+SL L +N+ SG +P TL + L L L +N+ G + + + N+ +L
Sbjct: 310 FFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLT 369
Query: 216 LHLNGNNLTGSIPSTIGY--LNLLDELHLSHNRLDGPIPPTIGNLTNLIALDLSSNQLSG 273
L L+ NN +G I + N L EL+L +N G IPPT+ N + L++L LS N LSG
Sbjct: 370 LDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSG 429
Query: 274 LLPREVGNLKYLASLSLNGNILIGPIPPTIXXXXXXXXXXXXXXRLSSSIPPELMNCXXX 333
+P +G+L L L L N+L G IP + L+ IP L NC
Sbjct: 430 TIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNL 489
Query: 334 XXXXXXXXXXXXXIPSEIGNLIFFRQLDLSRNFINGTIPSQLGKIPNISAVDLSKNNLSG 393
IP IG L L LS N +G IP++LG ++ +DL+ N +G
Sbjct: 490 NWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNG 549
Query: 394 VIPASVRR 401
IPA++ +
Sbjct: 550 TIPAAMFK 557
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 114/392 (29%), Positives = 170/392 (43%), Gaps = 26/392 (6%)
Query: 31 LSGRMPSE-IGALSKLEKLVLSHNSLTGRIPSEIGALS-RLKVLDLSYNRLTGTIPSEXX 88
SG +P + + + L+ L LS N +G +P + LS L LDLS N +G I
Sbjct: 327 FSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLC 386
Query: 89 X--XXXXXXXXXXXXXXXXXXPLEFGNLKDLDQLRLQGNKLDGLIPSSIGNLTNLTYLDL 146
P N +L L L N L G IPSS+G+L+ L L L
Sbjct: 387 QNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKL 446
Query: 147 SLNQLSGRLPQEVGNLKNLKSLFLDNNHLSGPIPSTLYHLNQLATLCLGYNKLVGPVTKE 206
LN L G +PQE+ +K L++L LD N L+G IPS L + L + L N+L G + K
Sbjct: 447 WLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKW 506
Query: 207 VGNMKNLDRLHLNGNNLTGSIPSTIGYLNLLDELHLSHNRLDGPIPPTIGNLTNLIALDL 266
+G ++NL L L+ N+ +G+IP+ +G L L L+ N +G IP + + IA +
Sbjct: 507 IGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANF 566
Query: 267 SSN----------------------QLSGLLPREVGNLKYLASLSLNGNILIGPIPPTIX 304
+ + G+ ++ L ++ + G PT
Sbjct: 567 IAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFD 626
Query: 305 XXXXXXXXXXXXXRLSSSIPPELMNCXXXXXXXXXXXXXXXXIPSEIGNLIFFRQLDLSR 364
LS IP E+ + IP E+G+L LDLS
Sbjct: 627 NNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSS 686
Query: 365 NFINGTIPSQLGKIPNISAVDLSKNNLSGVIP 396
N ++G IP + + ++ +DLS NNLSG IP
Sbjct: 687 NKLDGRIPQAMSALTMLTEIDLSNNNLSGPIP 718
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 112/348 (32%), Positives = 156/348 (44%), Gaps = 78/348 (22%)
Query: 2 DNNFTGAELSQLNFTCFPNLVTFRIWGTLLSGRMPSEIGALSKLEKLVLSHNSLTGRIPS 61
+N FTG L+ C LV+ + LSG +PS +G+LSKL L L N L G IP
Sbjct: 400 NNGFTGKIPPTLS-NC-SELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQ 457
Query: 62 EIGALSRLKVLDLSYNRLTGTIPSEXXXXXXXXXXXXXXXXXXXXXPLEFGNLKDLDQLR 121
E+ + L+ L L +N LTG IPS N +L+ +
Sbjct: 458 ELMYVKTLETLILDFNDLTGEIPS------------------------GLSNCTNLNWIS 493
Query: 122 LQGNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNLKSLFLDNNHLSGPIPS 181
L N+L G IP IG L NL L LS N SG +P E+G+ ++L L L+ N +G IP+
Sbjct: 494 LSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPA 553
Query: 182 TLY-------------------------------------------HLNQLATL--CLGY 196
++ LN+L+T C
Sbjct: 554 AMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNIT 613
Query: 197 NKLVG----PVTKEVGNMKNLDRLHLNGNNLTGSIPSTIGYLNLLDELHLSHNRLDGPIP 252
+++ G P G+M LD + N L+G IP IG + L L+L HN + G IP
Sbjct: 614 SRVYGGHTSPTFDNNGSMMFLDMSY---NMLSGYIPKEIGSMPYLFILNLGHNDISGSIP 670
Query: 253 PTIGNLTNLIALDLSSNQLSGLLPREVGNLKYLASLSLNGNILIGPIP 300
+G+L L LDLSSN+L G +P+ + L L + L+ N L GPIP
Sbjct: 671 DEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIP 718
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/309 (30%), Positives = 138/309 (44%), Gaps = 71/309 (22%)
Query: 21 LVTFRIWGTLLSGRMPSEIGALSKLEKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLT 80
L ++W +L G +P E+ + LE L+L N LTG IPS + + L + LS NRLT
Sbjct: 441 LRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLT 500
Query: 81 GTIPSEXXXXXXXXXXXXXXXXXXXXXPLEFGNLKDLDQLRLQGNKLDGLIPSSIGNLTN 140
G IP G L++L L+L N G IP+ +G+ +
Sbjct: 501 GEIPK------------------------WIGRLENLAILKLSNNSFSGNIPAELGDCRS 536
Query: 141 LTYLDLSLNQLSGRLPQEV--------------------------------GNLKNLKSL 168
L +LDL+ N +G +P + GNL + +
Sbjct: 537 LIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGI 596
Query: 169 FLDN-NHLS-------------GPIPSTLYHLNQLATLCLGYNKLVGPVTKEVGNMKNLD 214
+ N LS G T + + L + YN L G + KE+G+M L
Sbjct: 597 RSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLF 656
Query: 215 RLHLNGNNLTGSIPSTIGYLNLLDELHLSHNRLDGPIPPTIGNLTNLIALDLSSNQLSGL 274
L+L N+++GSIP +G L L+ L LS N+LDG IP + LT L +DLS+N LSG
Sbjct: 657 ILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGP 716
Query: 275 LPREVGNLK 283
+P E+G +
Sbjct: 717 IP-EMGQFE 724
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 89/180 (49%), Gaps = 33/180 (18%)
Query: 5 FTGAELSQLN--FTCFPNLVTFRIWGTLLSGRMPSEIGALSKLEKLVLSHNSLTGRIPSE 62
F G QLN T P +T R++G G + L +S+N L+G IP E
Sbjct: 593 FQGIRSEQLNRLSTRNPCNITSRVYG----GHTSPTFDNNGSMMFLDMSYNMLSGYIPKE 648
Query: 63 IGALSRLKVLDLSYNRLTGTIPSEXXXXXXXXXXXXXXXXXXXXXPLEFGNLKDLDQLRL 122
IG++ L +L+L +N ++G+IP E G+L+ L+ L L
Sbjct: 649 IGSMPYLFILNLGHNDISGSIPDE------------------------VGDLRGLNILDL 684
Query: 123 QGNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNL-KSLFLDNNHLSG-PIP 180
NKLDG IP ++ LT LT +DLS N LSG +P E+G + + FL+N L G P+P
Sbjct: 685 SSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIP-EMGQFETFPPAKFLNNPGLCGYPLP 743
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 132/318 (41%), Gaps = 36/318 (11%)
Query: 139 TNLTYLDLSLNQLSGRLP--QEVGNLKNLKSLFLDNNHLSGPIP-STLYHLNQLATLCLG 195
+LT LDLS N LSG + +G+ LK L + +N L P S LN L L L
Sbjct: 97 ASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLS 156
Query: 196 YNKLVGP------VTKEVGNMK-------------------NLDRLHLNGNNLTGSIPST 230
N + G ++ G +K NL+ L ++ NN + IP
Sbjct: 157 ANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIP-F 215
Query: 231 IGYLNLLDELHLSHNRLDGPIPPTIGNLTNLIALDLSSNQLSGLLPREVGNLKYLASLSL 290
+G + L L +S N+L G I T L L++SSNQ G +P LK L LSL
Sbjct: 216 LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLP--LKSLQYLSL 273
Query: 291 NGNILIGPIPPTIXXXXXX-XXXXXXXXRLSSSIPPELMNCXXXXXXXXXXXXXXXXIPS 349
N G IP + ++PP +C +P
Sbjct: 274 AENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPM 333
Query: 350 E-IGNLIFFRQLDLSRNFINGTIPSQLGKI-PNISAVDLSKNNLSGVIPASVRRIPKLIV 407
+ + + + LDLS N +G +P L + ++ +DLS NN SG I ++ + PK +
Sbjct: 334 DTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTL 393
Query: 408 SENNLELENSTSSENAPP 425
E L L+N+ + PP
Sbjct: 394 QE--LYLQNNGFTGKIPP 409
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 6/65 (9%)
Query: 352 GNLIFFRQLDLSRNFINGTIPSQLGKIPNISAVDLSKNNLSGVIPASV---RRIPKLIVS 408
G+++F LD+S N ++G IP ++G +P + ++L N++SG IP V R + L +S
Sbjct: 629 GSMMF---LDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLS 685
Query: 409 ENNLE 413
N L+
Sbjct: 686 SNKLD 690
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 132 bits (331), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 121/368 (32%), Positives = 171/368 (46%), Gaps = 31/368 (8%)
Query: 39 IGALSKLEKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTGTIPSEXXXXXXXXXXXX 98
+G S L+ L +S N L+G I + LK+L++S N+ G IP
Sbjct: 219 LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIP-------------- 264
Query: 99 XXXXXXXXXPLEFGNLKDLDQLRLQGNKLDGLIPSSI-GNLTNLTYLDLSLNQLSGRLPQ 157
PL LK L L L NK G IP + G LT LDLS N G +P
Sbjct: 265 ---------PLP---LKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPP 312
Query: 158 EVGNLKNLKSLFLDNNHLSGPIP-STLYHLNQLATLCLGYNKLVGPVTKEVGNMK-NLDR 215
G+ L+SL L +N+ SG +P TL + L L L +N+ G + + + N+ +L
Sbjct: 313 FFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLT 372
Query: 216 LHLNGNNLTGSIPSTIGY--LNLLDELHLSHNRLDGPIPPTIGNLTNLIALDLSSNQLSG 273
L L+ NN +G I + N L EL+L +N G IPPT+ N + L++L LS N LSG
Sbjct: 373 LDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSG 432
Query: 274 LLPREVGNLKYLASLSLNGNILIGPIPPTIXXXXXXXXXXXXXXRLSSSIPPELMNCXXX 333
+P +G+L L L L N+L G IP + L+ IP L NC
Sbjct: 433 TIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNL 492
Query: 334 XXXXXXXXXXXXXIPSEIGNLIFFRQLDLSRNFINGTIPSQLGKIPNISAVDLSKNNLSG 393
IP IG L L LS N +G IP++LG ++ +DL+ N +G
Sbjct: 493 NWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNG 552
Query: 394 VIPASVRR 401
IPA++ +
Sbjct: 553 TIPAAMFK 560
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 114/392 (29%), Positives = 170/392 (43%), Gaps = 26/392 (6%)
Query: 31 LSGRMPSE-IGALSKLEKLVLSHNSLTGRIPSEIGALS-RLKVLDLSYNRLTGTIPSEXX 88
SG +P + + + L+ L LS N +G +P + LS L LDLS N +G I
Sbjct: 330 FSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLC 389
Query: 89 X--XXXXXXXXXXXXXXXXXXPLEFGNLKDLDQLRLQGNKLDGLIPSSIGNLTNLTYLDL 146
P N +L L L N L G IPSS+G+L+ L L L
Sbjct: 390 QNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKL 449
Query: 147 SLNQLSGRLPQEVGNLKNLKSLFLDNNHLSGPIPSTLYHLNQLATLCLGYNKLVGPVTKE 206
LN L G +PQE+ +K L++L LD N L+G IPS L + L + L N+L G + K
Sbjct: 450 WLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKW 509
Query: 207 VGNMKNLDRLHLNGNNLTGSIPSTIGYLNLLDELHLSHNRLDGPIPPTIGNLTNLIALDL 266
+G ++NL L L+ N+ +G+IP+ +G L L L+ N +G IP + + IA +
Sbjct: 510 IGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANF 569
Query: 267 SSN----------------------QLSGLLPREVGNLKYLASLSLNGNILIGPIPPTIX 304
+ + G+ ++ L ++ + G PT
Sbjct: 570 IAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFD 629
Query: 305 XXXXXXXXXXXXXRLSSSIPPELMNCXXXXXXXXXXXXXXXXIPSEIGNLIFFRQLDLSR 364
LS IP E+ + IP E+G+L LDLS
Sbjct: 630 NNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSS 689
Query: 365 NFINGTIPSQLGKIPNISAVDLSKNNLSGVIP 396
N ++G IP + + ++ +DLS NNLSG IP
Sbjct: 690 NKLDGRIPQAMSALTMLTEIDLSNNNLSGPIP 721
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 106/329 (32%), Positives = 148/329 (44%), Gaps = 76/329 (23%)
Query: 21 LVTFRIWGTLLSGRMPSEIGALSKLEKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLT 80
LV+ + LSG +PS +G+LSKL L L N L G IP E+ + L+ L L +N LT
Sbjct: 420 LVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLT 479
Query: 81 GTIPSEXXXXXXXXXXXXXXXXXXXXXPLEFGNLKDLDQLRLQGNKLDGLIPSSIGNLTN 140
G IPS N +L+ + L N+L G IP IG L N
Sbjct: 480 GEIPS------------------------GLSNCTNLNWISLSNNRLTGEIPKWIGRLEN 515
Query: 141 LTYLDLSLNQLSGRLPQEVGNLKNLKSLFLDNNHLSGPIPSTLY---------------- 184
L L LS N SG +P E+G+ ++L L L+ N +G IP+ ++
Sbjct: 516 LAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRY 575
Query: 185 ---------------------------HLNQLATL--CLGYNKLVG----PVTKEVGNMK 211
LN+L+T C +++ G P G+M
Sbjct: 576 VYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMM 635
Query: 212 NLDRLHLNGNNLTGSIPSTIGYLNLLDELHLSHNRLDGPIPPTIGNLTNLIALDLSSNQL 271
LD + N L+G IP IG + L L+L HN + G IP +G+L L LDLSSN+L
Sbjct: 636 FLDMSY---NMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKL 692
Query: 272 SGLLPREVGNLKYLASLSLNGNILIGPIP 300
G +P+ + L L + L+ N L GPIP
Sbjct: 693 DGRIPQAMSALTMLTEIDLSNNNLSGPIP 721
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 94/309 (30%), Positives = 138/309 (44%), Gaps = 71/309 (22%)
Query: 21 LVTFRIWGTLLSGRMPSEIGALSKLEKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLT 80
L ++W +L G +P E+ + LE L+L N LTG IPS + + L + LS NRLT
Sbjct: 444 LRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLT 503
Query: 81 GTIPSEXXXXXXXXXXXXXXXXXXXXXPLEFGNLKDLDQLRLQGNKLDGLIPSSIGNLTN 140
G IP G L++L L+L N G IP+ +G+ +
Sbjct: 504 GEIPK------------------------WIGRLENLAILKLSNNSFSGNIPAELGDCRS 539
Query: 141 LTYLDLSLNQLSGRLPQEV--------------------------------GNLKNLKSL 168
L +LDL+ N +G +P + GNL + +
Sbjct: 540 LIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGI 599
Query: 169 FLDN-NHLS-------------GPIPSTLYHLNQLATLCLGYNKLVGPVTKEVGNMKNLD 214
+ N LS G T + + L + YN L G + KE+G+M L
Sbjct: 600 RSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLF 659
Query: 215 RLHLNGNNLTGSIPSTIGYLNLLDELHLSHNRLDGPIPPTIGNLTNLIALDLSSNQLSGL 274
L+L N+++GSIP +G L L+ L LS N+LDG IP + LT L +DLS+N LSG
Sbjct: 660 ILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGP 719
Query: 275 LPREVGNLK 283
+P E+G +
Sbjct: 720 IP-EMGQFE 727
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 89/180 (49%), Gaps = 33/180 (18%)
Query: 5 FTGAELSQLN--FTCFPNLVTFRIWGTLLSGRMPSEIGALSKLEKLVLSHNSLTGRIPSE 62
F G QLN T P +T R++G G + L +S+N L+G IP E
Sbjct: 596 FQGIRSEQLNRLSTRNPCNITSRVYG----GHTSPTFDNNGSMMFLDMSYNMLSGYIPKE 651
Query: 63 IGALSRLKVLDLSYNRLTGTIPSEXXXXXXXXXXXXXXXXXXXXXPLEFGNLKDLDQLRL 122
IG++ L +L+L +N ++G+IP E G+L+ L+ L L
Sbjct: 652 IGSMPYLFILNLGHNDISGSIPDE------------------------VGDLRGLNILDL 687
Query: 123 QGNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNL-KSLFLDNNHLSG-PIP 180
NKLDG IP ++ LT LT +DLS N LSG +P E+G + + FL+N L G P+P
Sbjct: 688 SSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIP-EMGQFETFPPAKFLNNPGLCGYPLP 746
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 117/275 (42%), Gaps = 19/275 (6%)
Query: 139 TNLTYLDLSLNQLSGRLP--QEVGNLKNLKSLFLDNNHLSGPIP-STLYHLNQLATLCLG 195
+LT LDLS N LSG + +G+ LK L + +N L P S LN L L L
Sbjct: 100 ASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLS 159
Query: 196 YNKLVGP------VTKEVGNMKNLDRLHLNGNNLTGSIPSTIGYLNLLDELHLSHNRLDG 249
N + G ++ G +K L ++GN ++G + + L+ L +S N
Sbjct: 160 ANSISGANVVGWVLSDGCGELK---HLAISGNKISGDV--DVSRCVNLEFLDVSSNNFST 214
Query: 250 PIPPTIGNLTNLIALDLSSNQLSGLLPREVGNLKYLASLSLNGNILIGPIPPTIXXXXXX 309
I P +G+ + L LD+S N+LSG R + L L+++ N +GPIPP
Sbjct: 215 GI-PFLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPP--LPLKSL 271
Query: 310 XXXXXXXXRLSSSIPPELMN-CXXXXXXXXXXXXXXXXIPSEIGNLIFFRQLDLSRNFIN 368
+ + IP L C +P G+ L LS N +
Sbjct: 272 QYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFS 331
Query: 369 GTIP-SQLGKIPNISAVDLSKNNLSGVIPASVRRI 402
G +P L K+ + +DLS N SG +P S+ +
Sbjct: 332 GELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNL 366
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 6/65 (9%)
Query: 352 GNLIFFRQLDLSRNFINGTIPSQLGKIPNISAVDLSKNNLSGVIPASV---RRIPKLIVS 408
G+++F LD+S N ++G IP ++G +P + ++L N++SG IP V R + L +S
Sbjct: 632 GSMMF---LDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLS 688
Query: 409 ENNLE 413
N L+
Sbjct: 689 SNKLD 693
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/214 (38%), Positives = 111/214 (51%), Gaps = 9/214 (4%)
Query: 497 RITFEEMIEATEDFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQT 556
R+ ++ EAT +F K+ IG G +G VY+ L G VALK R E +E F+T
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALK---RRTPESSQGIEEFET 84
Query: 557 EARLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLR-NDVEAVELDWTKRVNI 615
E LS RH ++V L GFC M LIY+YME G+L L +D+ + + W +R+ I
Sbjct: 85 EIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEI 144
Query: 616 VKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARL-LHPDSSNRTLVV 674
A L YLH +I+HRD + DFG+++ D ++ VV
Sbjct: 145 CIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVV 201
Query: 675 -GTYGYIAPELAYTMAVTEKCDVYSFGVVALEVL 707
GT GYI PE +TEK DVYSFGVV EVL
Sbjct: 202 KGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVL 235
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 81/214 (37%), Positives = 109/214 (50%), Gaps = 9/214 (4%)
Query: 497 RITFEEMIEATEDFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQT 556
R+ ++ EAT +F K+ IG G +G VY+ L G VALK R E +E F+T
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALK---RRTPESSQGIEEFET 84
Query: 557 EARLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLR-NDVEAVELDWTKRVNI 615
E LS RH ++V L GFC M LIY+YME G+L L +D+ + + W +R+ I
Sbjct: 85 EIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEI 144
Query: 616 VKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHP--DSSNRTLV 673
A L YLH +I+HRD + DFG+++ + +V
Sbjct: 145 CIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVV 201
Query: 674 VGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVL 707
GT GYI PE +TEK DVYSFGVV EVL
Sbjct: 202 KGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVL 235
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 106/208 (50%), Gaps = 9/208 (4%)
Query: 506 ATEDFHIKYCIGTGGYGSVYRAQLSSGKLV-ALKKLHRSETEEPAFLESFQTEARLLSQI 564
A EDF I +G G +G+VY A+ K + ALK L +++ E+ + E + S +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 565 RHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALS 624
RH NI++LYG+ ++LI EY RG ++ L+ + + D + + +A+ALS
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQ---KLSKFDEQRTATYITELANALS 127
Query: 625 YLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPEL 684
Y H ++HRD E +ADFG + +H SS RT + GT Y+ PE+
Sbjct: 128 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEM 182
Query: 685 AYTMAVTEKCDVYSFGVVALEVLMGSHP 712
EK D++S GV+ E L+G P
Sbjct: 183 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 106/208 (50%), Gaps = 9/208 (4%)
Query: 506 ATEDFHIKYCIGTGGYGSVYRAQLSSGKLV-ALKKLHRSETEEPAFLESFQTEARLLSQI 564
A EDF I +G G +G+VY A+ K + ALK L +++ E+ + E + S +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 565 RHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALS 624
RH NI++LYG+ ++LI EY G+++ L+ + + D + + +A+ALS
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ---KLSKFDEQRTATYITELANALS 148
Query: 625 YLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPEL 684
Y H ++HRD E +ADFG + +H SS RT + GT Y+ PE+
Sbjct: 149 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEM 203
Query: 685 AYTMAVTEKCDVYSFGVVALEVLMGSHP 712
EK D++S GV+ E L+G P
Sbjct: 204 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 231
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 106/210 (50%), Gaps = 9/210 (4%)
Query: 506 ATEDFHIKYCIGTGGYGSVYRAQLSSGKLV-ALKKLHRSETEEPAFLESFQTEARLLSQI 564
A EDF I +G G +G+VY A+ K + ALK L +++ E+ + E + S +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 565 RHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALS 624
RH NI++LYG+ ++LI EY RG ++ L+ + + D + + +A+ALS
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQ---KLSKFDEQRTATYITELANALS 127
Query: 625 YLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPEL 684
Y H ++HRD E +ADFG + +H SS R + GT Y+ PE+
Sbjct: 128 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLXGTLDYLPPEM 182
Query: 685 AYTMAVTEKCDVYSFGVVALEVLMGSHPTD 714
EK D++S GV+ E L+G P +
Sbjct: 183 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 106/208 (50%), Gaps = 9/208 (4%)
Query: 506 ATEDFHIKYCIGTGGYGSVYRAQLSSGKLV-ALKKLHRSETEEPAFLESFQTEARLLSQI 564
A EDF I +G G +G+VY A+ K + ALK L +++ E+ + E + S +
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 565 RHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALS 624
RH NI++LYG+ ++LI EY G+++ L+ + + D + + +A+ALS
Sbjct: 83 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ---KLSKFDEQRTATYITELANALS 139
Query: 625 YLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPEL 684
Y H ++HRD E +ADFG + +H SS RT + GT Y+ PE+
Sbjct: 140 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEM 194
Query: 685 AYTMAVTEKCDVYSFGVVALEVLMGSHP 712
EK D++S GV+ E L+G P
Sbjct: 195 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 222
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 105/208 (50%), Gaps = 9/208 (4%)
Query: 506 ATEDFHIKYCIGTGGYGSVYRAQLSSGKLV-ALKKLHRSETEEPAFLESFQTEARLLSQI 564
A EDF I +G G +G+VY A+ K + ALK L +++ E+ + E + S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 565 RHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALS 624
RH NI++LYG+ ++LI EY G+++ R + + D + + +A+ALS
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 122
Query: 625 YLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPEL 684
Y H ++HRD E +ADFG + +H SS RT + GT Y+ PE+
Sbjct: 123 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEM 177
Query: 685 AYTMAVTEKCDVYSFGVVALEVLMGSHP 712
EK D++S GV+ E L+G P
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 106/210 (50%), Gaps = 9/210 (4%)
Query: 506 ATEDFHIKYCIGTGGYGSVYRAQLSSGKLV-ALKKLHRSETEEPAFLESFQTEARLLSQI 564
A EDF I +G G +G+VY A+ K + ALK L +++ E+ + E + S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 565 RHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALS 624
RH NI++LYG+ ++LI EY G+++ R + + D + + +A+ALS
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 122
Query: 625 YLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPEL 684
Y H ++HRD E +ADFG + +H SS RT + GT Y+ PE+
Sbjct: 123 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTXLCGTLDYLPPEM 177
Query: 685 AYTMAVTEKCDVYSFGVVALEVLMGSHPTD 714
EK D++S GV+ E L+G P +
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 105/208 (50%), Gaps = 9/208 (4%)
Query: 506 ATEDFHIKYCIGTGGYGSVYRAQLSSGKLV-ALKKLHRSETEEPAFLESFQTEARLLSQI 564
A EDF I +G G +G+VY A+ K + ALK L +++ E+ + E + S +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 565 RHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALS 624
RH NI++LYG+ ++LI EY G+++ R + + D + + +A+ALS
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 127
Query: 625 YLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPEL 684
Y H ++HRD E +ADFG + +H SS RT + GT Y+ PE+
Sbjct: 128 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEM 182
Query: 685 AYTMAVTEKCDVYSFGVVALEVLMGSHP 712
EK D++S GV+ E L+G P
Sbjct: 183 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 106/210 (50%), Gaps = 9/210 (4%)
Query: 506 ATEDFHIKYCIGTGGYGSVYRAQLSSGKLV-ALKKLHRSETEEPAFLESFQTEARLLSQI 564
A EDF I +G G +G+VY A+ K + ALK L +++ E+ + E + S +
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 565 RHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALS 624
RH NI++LYG+ ++LI EY G+++ R + + D + + +A+ALS
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 121
Query: 625 YLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPEL 684
Y H ++HRD E +ADFG + +H SS RT + GT Y+ PE+
Sbjct: 122 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEM 176
Query: 685 AYTMAVTEKCDVYSFGVVALEVLMGSHPTD 714
EK D++S GV+ E L+G P +
Sbjct: 177 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 206
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 105/208 (50%), Gaps = 9/208 (4%)
Query: 506 ATEDFHIKYCIGTGGYGSVYRAQLSSGKLV-ALKKLHRSETEEPAFLESFQTEARLLSQI 564
A EDF I +G G +G+VY A+ K + ALK L +++ E+ + E + S +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 565 RHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALS 624
RH NI++LYG+ ++LI EY G+++ R + + D + + +A+ALS
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 125
Query: 625 YLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPEL 684
Y H ++HRD E +ADFG + +H SS RT + GT Y+ PE+
Sbjct: 126 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEM 180
Query: 685 AYTMAVTEKCDVYSFGVVALEVLMGSHP 712
EK D++S GV+ E L+G P
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 106/210 (50%), Gaps = 9/210 (4%)
Query: 506 ATEDFHIKYCIGTGGYGSVYRAQLSSGKLV-ALKKLHRSETEEPAFLESFQTEARLLSQI 564
A EDF I +G G +G+VY A+ K + ALK L +++ E+ + E + S +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 565 RHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALS 624
RH NI++LYG+ ++LI EY G+++ R + + D + + +A+ALS
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 125
Query: 625 YLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPEL 684
Y H ++HRD E +ADFG + +H SS RT + GT Y+ PE+
Sbjct: 126 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEM 180
Query: 685 AYTMAVTEKCDVYSFGVVALEVLMGSHPTD 714
EK D++S GV+ E L+G P +
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 106/210 (50%), Gaps = 9/210 (4%)
Query: 506 ATEDFHIKYCIGTGGYGSVYRAQLSSGKLV-ALKKLHRSETEEPAFLESFQTEARLLSQI 564
A EDF I +G G +G+VY A+ K + ALK L +++ E+ + E + S +
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 565 RHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALS 624
RH NI++LYG+ ++LI EY G+++ R + + D + + +A+ALS
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 126
Query: 625 YLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPEL 684
Y H ++HRD E +ADFG + +H SS RT + GT Y+ PE+
Sbjct: 127 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEM 181
Query: 685 AYTMAVTEKCDVYSFGVVALEVLMGSHPTD 714
EK D++S GV+ E L+G P +
Sbjct: 182 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 211
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 105/208 (50%), Gaps = 9/208 (4%)
Query: 506 ATEDFHIKYCIGTGGYGSVYRAQLSSGKLV-ALKKLHRSETEEPAFLESFQTEARLLSQI 564
A EDF I +G G +G+VY A+ K + ALK L +++ E+ + E + S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 565 RHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALS 624
RH NI++LYG+ ++LI EY G+++ R + + D + + +A+ALS
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 122
Query: 625 YLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPEL 684
Y H ++HRD E +ADFG + +H SS RT + GT Y+ PE+
Sbjct: 123 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTELCGTLDYLPPEM 177
Query: 685 AYTMAVTEKCDVYSFGVVALEVLMGSHP 712
EK D++S GV+ E L+G P
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 105/208 (50%), Gaps = 9/208 (4%)
Query: 506 ATEDFHIKYCIGTGGYGSVYRAQLSSGKLV-ALKKLHRSETEEPAFLESFQTEARLLSQI 564
A EDF I +G G +G+VY A+ K + ALK L +++ E+ + E + S +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 565 RHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALS 624
RH NI++LYG+ ++LI EY G+++ L+ + + D + + +A+ALS
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ---KLSKFDEQRTATYITELANALS 123
Query: 625 YLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPEL 684
Y H ++HRD E +ADFG + H SS RT + GT Y+ PE+
Sbjct: 124 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--CHAPSSRRTTLSGTLDYLPPEM 178
Query: 685 AYTMAVTEKCDVYSFGVVALEVLMGSHP 712
EK D++S GV+ E L+G P
Sbjct: 179 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 105/208 (50%), Gaps = 9/208 (4%)
Query: 506 ATEDFHIKYCIGTGGYGSVYRAQLSSGKLV-ALKKLHRSETEEPAFLESFQTEARLLSQI 564
A EDF I +G G +G+VY A+ K + ALK L +++ E+ + E + S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 565 RHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALS 624
RH NI++LYG+ ++LI EY G+++ R + + D + + +A+ALS
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 122
Query: 625 YLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPEL 684
Y H ++HRD E +ADFG + +H SS RT + GT Y+ PE+
Sbjct: 123 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPPEM 177
Query: 685 AYTMAVTEKCDVYSFGVVALEVLMGSHP 712
EK D++S GV+ E L+G P
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 105/208 (50%), Gaps = 9/208 (4%)
Query: 506 ATEDFHIKYCIGTGGYGSVYRAQLSSGKLV-ALKKLHRSETEEPAFLESFQTEARLLSQI 564
A EDF I +G G +G+VY A+ K + ALK L +++ E+ + E + S +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 565 RHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALS 624
RH NI++LYG+ ++LI EY G+++ R + + D + + +A+ALS
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 127
Query: 625 YLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPEL 684
Y H ++HRD E +ADFG + +H SS RT + GT Y+ PE+
Sbjct: 128 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPPEM 182
Query: 685 AYTMAVTEKCDVYSFGVVALEVLMGSHP 712
EK D++S GV+ E L+G P
Sbjct: 183 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 106/208 (50%), Gaps = 9/208 (4%)
Query: 506 ATEDFHIKYCIGTGGYGSVYRAQLSSGKLV-ALKKLHRSETEEPAFLESFQTEARLLSQI 564
A EDF I +G G +G+VY A+ K + ALK L +++ E+ + E + S +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 565 RHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALS 624
RH NI++LYG+ ++LI EY G+++ L+ + + D + + +A+ALS
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ---KLSKFDEQRTATYITELANALS 123
Query: 625 YLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPEL 684
Y H ++HRD E +ADFG + +H SS RT + GT Y+ PE+
Sbjct: 124 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPPEM 178
Query: 685 AYTMAVTEKCDVYSFGVVALEVLMGSHP 712
EK D++S GV+ E L+G P
Sbjct: 179 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 107/208 (51%), Gaps = 9/208 (4%)
Query: 506 ATEDFHIKYCIGTGGYGSVYRAQLSSGKLV-ALKKLHRSETEEPAFLESFQTEARLLSQI 564
A EDF I +G G +G+VY A+ + K + ALK L +++ E+ + E + S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 565 RHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALS 624
RH NI++LYG+ + ++LI EY G+++ L+ + + D + + +A+ALS
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQ---KLSKFDEQRTATYITELANALS 122
Query: 625 YLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPEL 684
Y H ++HRD E +ADFG + +H SS R + GT Y+ PE+
Sbjct: 123 YCH---SKKVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRAALCGTLDYLPPEM 177
Query: 685 AYTMAVTEKCDVYSFGVVALEVLMGSHP 712
EK D++S GV+ E L+G P
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 106/210 (50%), Gaps = 9/210 (4%)
Query: 506 ATEDFHIKYCIGTGGYGSVYRAQLSSGKLV-ALKKLHRSETEEPAFLESFQTEARLLSQI 564
A EDF I +G G +G+VY A+ K + ALK L +++ E+ + E + S +
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 565 RHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALS 624
RH NI++LYG+ ++LI EY G+++ R + + D + + +A+ALS
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 119
Query: 625 YLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPEL 684
Y H ++HRD E +ADFG + +H SS RT + GT Y+ PE+
Sbjct: 120 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEM 174
Query: 685 AYTMAVTEKCDVYSFGVVALEVLMGSHPTD 714
EK D++S GV+ E L+G P +
Sbjct: 175 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 204
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 105/208 (50%), Gaps = 9/208 (4%)
Query: 506 ATEDFHIKYCIGTGGYGSVYRAQLSSGKLV-ALKKLHRSETEEPAFLESFQTEARLLSQI 564
A EDF I +G G +G+VY A+ K + ALK L +++ E+ + E + S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 565 RHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALS 624
RH NI++LYG+ ++LI EY G+++ R + + D + + +A+ALS
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 122
Query: 625 YLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPEL 684
Y H ++HRD E +ADFG + +H SS RT + GT Y+ PE+
Sbjct: 123 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPPEM 177
Query: 685 AYTMAVTEKCDVYSFGVVALEVLMGSHP 712
EK D++S GV+ E L+G P
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 105/208 (50%), Gaps = 9/208 (4%)
Query: 506 ATEDFHIKYCIGTGGYGSVYRAQLSSGKLV-ALKKLHRSETEEPAFLESFQTEARLLSQI 564
A EDF I +G G +G+VY A+ K + ALK L +++ E+ + E + S +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 565 RHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALS 624
RH NI++LYG+ ++LI EY G+++ L+ + + D + + +A+ALS
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ---KLSKFDEQRTATYITELANALS 127
Query: 625 YLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPEL 684
Y H ++HRD E +ADFG + +H SS RT + GT Y+ PE
Sbjct: 128 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEX 182
Query: 685 AYTMAVTEKCDVYSFGVVALEVLMGSHP 712
EK D++S GV+ E L+G P
Sbjct: 183 IEGRXHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 105/208 (50%), Gaps = 9/208 (4%)
Query: 506 ATEDFHIKYCIGTGGYGSVYRAQLSSGKLV-ALKKLHRSETEEPAFLESFQTEARLLSQI 564
A EDF I +G G +G+VY A+ K + ALK L +++ E+ + E + S +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 565 RHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALS 624
RH NI++LYG+ ++LI EY G+++ L+ + + D + + +A+ALS
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ---KLSKFDEQRTATYITELANALS 148
Query: 625 YLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPEL 684
Y H ++HRD E +ADFG + +H SS R + GT Y+ PE+
Sbjct: 149 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDDLCGTLDYLPPEM 203
Query: 685 AYTMAVTEKCDVYSFGVVALEVLMGSHP 712
EK D++S GV+ E L+G P
Sbjct: 204 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 231
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 105/210 (50%), Gaps = 9/210 (4%)
Query: 506 ATEDFHIKYCIGTGGYGSVYRAQLSSGKLV-ALKKLHRSETEEPAFLESFQTEARLLSQI 564
A EDF I +G G +G+VY A+ K + ALK L +++ E+ + E + S +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 565 RHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALS 624
RH NI++LYG+ ++LI EY G+++ R + + D + + +A+ALS
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 125
Query: 625 YLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPEL 684
Y H ++HRD E +ADFG + +H SS R + GT Y+ PE+
Sbjct: 126 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRAALCGTLDYLPPEM 180
Query: 685 AYTMAVTEKCDVYSFGVVALEVLMGSHPTD 714
EK D++S GV+ E L+G P +
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 106/210 (50%), Gaps = 9/210 (4%)
Query: 506 ATEDFHIKYCIGTGGYGSVYRAQLSSGKLV-ALKKLHRSETEEPAFLESFQTEARLLSQI 564
A EDF I +G G +G+VY A+ K + ALK L +++ E+ + E + S +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 565 RHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALS 624
RH NI++LYG+ ++LI EY G+++ R + + D + + +A+ALS
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 125
Query: 625 YLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPEL 684
Y H ++HRD E +A+FG + +H SS RT + GT Y+ PE+
Sbjct: 126 YCH---SKRVIHRDIKPENLLLGSAGELKIANFGWS--VHAPSSRRTTLCGTLDYLPPEM 180
Query: 685 AYTMAVTEKCDVYSFGVVALEVLMGSHPTD 714
EK D++S GV+ E L+G P +
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 105/210 (50%), Gaps = 9/210 (4%)
Query: 506 ATEDFHIKYCIGTGGYGSVYRAQLSSGKLV-ALKKLHRSETEEPAFLESFQTEARLLSQI 564
A EDF I +G G +G+VY A+ K + ALK L +++ E+ + E + S +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 565 RHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALS 624
RH NI++LYG+ ++LI EY G+++ R + + D + + +A+ALS
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 124
Query: 625 YLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPEL 684
Y H ++HRD E +ADFG + +H SS R + GT Y+ PE+
Sbjct: 125 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLCGTLDYLPPEM 179
Query: 685 AYTMAVTEKCDVYSFGVVALEVLMGSHPTD 714
EK D++S GV+ E L+G P +
Sbjct: 180 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 209
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 105/210 (50%), Gaps = 9/210 (4%)
Query: 506 ATEDFHIKYCIGTGGYGSVYRAQLSSGKLV-ALKKLHRSETEEPAFLESFQTEARLLSQI 564
A EDF I +G G +G+VY A+ K + ALK L +++ E+ + E + S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 565 RHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALS 624
RH NI++LYG+ ++LI EY G+++ R + + D + + +A+ALS
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 122
Query: 625 YLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPEL 684
Y H ++HRD E +ADFG + +H SS R + GT Y+ PE+
Sbjct: 123 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRAALCGTLDYLPPEM 177
Query: 685 AYTMAVTEKCDVYSFGVVALEVLMGSHPTD 714
EK D++S GV+ E L+G P +
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 105/210 (50%), Gaps = 9/210 (4%)
Query: 506 ATEDFHIKYCIGTGGYGSVYRAQLSSGKLV-ALKKLHRSETEEPAFLESFQTEARLLSQI 564
A EDF I +G G +G+VY A+ K + ALK L +++ E+ + E + S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 565 RHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALS 624
RH NI++LYG+ ++LI EY G+++ R + + D + + +A+ALS
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 122
Query: 625 YLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPEL 684
Y H ++HRD E +ADFG + +H SS R + GT Y+ PE+
Sbjct: 123 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLCGTLDYLPPEM 177
Query: 685 AYTMAVTEKCDVYSFGVVALEVLMGSHPTD 714
EK D++S GV+ E L+G P +
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 105/208 (50%), Gaps = 9/208 (4%)
Query: 506 ATEDFHIKYCIGTGGYGSVYRAQLSSGKLV-ALKKLHRSETEEPAFLESFQTEARLLSQI 564
A EDF I +G G +G+VY A+ K + ALK L +++ E+ + E + S +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 565 RHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALS 624
RH NI++LYG+ ++LI EY G+++ L+ + + D + + +A+ALS
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ---KLSKFDEQRTATYITELANALS 123
Query: 625 YLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPEL 684
Y H ++HRD E +ADFG + +H SS R + GT Y+ PE+
Sbjct: 124 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDTLCGTLDYLPPEM 178
Query: 685 AYTMAVTEKCDVYSFGVVALEVLMGSHP 712
EK D++S GV+ E L+G P
Sbjct: 179 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 105/208 (50%), Gaps = 9/208 (4%)
Query: 506 ATEDFHIKYCIGTGGYGSVYRAQLSSGKLV-ALKKLHRSETEEPAFLESFQTEARLLSQI 564
A EDF I +G G +G+VY A+ K + ALK L +++ E+ + E + S +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 565 RHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALS 624
RH NI++LYG+ ++LI EY G+++ R + + D + + +A+ALS
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 124
Query: 625 YLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPEL 684
Y H ++HRD E +A+FG + +H SS RT + GT Y+ PE+
Sbjct: 125 YCH---SKRVIHRDIKPENLLLGSAGELKIANFGWS--VHAPSSRRTTLCGTLDYLPPEM 179
Query: 685 AYTMAVTEKCDVYSFGVVALEVLMGSHP 712
EK D++S GV+ E L+G P
Sbjct: 180 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 207
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 105/210 (50%), Gaps = 9/210 (4%)
Query: 506 ATEDFHIKYCIGTGGYGSVYRAQLSSGKLV-ALKKLHRSETEEPAFLESFQTEARLLSQI 564
A EDF I +G G +G+VY A+ K + ALK L +++ E+ + E + S +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 565 RHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALS 624
RH NI++LYG+ ++LI EY G+++ R + + D + + +A+ALS
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 125
Query: 625 YLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPEL 684
Y H ++HRD E +ADFG + +H SS R + GT Y+ PE+
Sbjct: 126 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLCGTLDYLPPEM 180
Query: 685 AYTMAVTEKCDVYSFGVVALEVLMGSHPTD 714
EK D++S GV+ E L+G P +
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 105/208 (50%), Gaps = 9/208 (4%)
Query: 506 ATEDFHIKYCIGTGGYGSVYRAQLSSGKLV-ALKKLHRSETEEPAFLESFQTEARLLSQI 564
A EDF I +G G +G+VY A+ K + ALK L +++ E+ + E + S +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 565 RHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALS 624
RH NI++LYG+ ++LI EY G+++ L+ + + D + + +A+ALS
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ---KLSKFDEQRTATYITELANALS 125
Query: 625 YLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPEL 684
Y H ++HRD E +ADFG + +H SS R + GT Y+ PE+
Sbjct: 126 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDDLCGTLDYLPPEM 180
Query: 685 AYTMAVTEKCDVYSFGVVALEVLMGSHP 712
EK D++S GV+ E L+G P
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 105/219 (47%), Gaps = 3/219 (1%)
Query: 494 YDGRITFEEMIEATEDFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLES 553
+ G + ++M D +IK IG G +G+V+RA+ G VA+K L + E
Sbjct: 23 FQGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNE- 80
Query: 554 FQTEARLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRV 613
F E ++ ++RH NIV G + ++ EY+ RGSL+ +L +LD +R+
Sbjct: 81 FLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRL 140
Query: 614 NIVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLV 673
++ +A ++YLH + P IVHRD V DFGL+RL
Sbjct: 141 SMAYDVAKGMNYLH-NRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXA 199
Query: 674 VGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHP 712
GT ++APE+ EK DVYSFGV+ E+ P
Sbjct: 200 AGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQP 238
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 103/206 (50%), Gaps = 9/206 (4%)
Query: 508 EDFHIKYCIGTGGYGSVYRAQLSSGKLV-ALKKLHRSETEEPAFLESFQTEARLLSQIRH 566
EDF I +G G +G+VY A+ K + ALK L +++ E+ + E + S +RH
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 567 RNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYL 626
NI++LYG+ ++LI EY G+++ R + D + + +A+ALSY
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSRFDEQRTATYITELANALSYC 128
Query: 627 HYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAY 686
H ++HRD E +ADFG + +H SS RT + GT Y+ PE+
Sbjct: 129 H---SKRVIHRDIKPENLLLGSNGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIE 183
Query: 687 TMAVTEKCDVYSFGVVALEVLMGSHP 712
EK D++S GV+ E L+G P
Sbjct: 184 GRMHDEKVDLWSLGVLCYEFLVGMPP 209
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 106/219 (48%), Gaps = 3/219 (1%)
Query: 494 YDGRITFEEMIEATEDFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLES 553
+ G + ++M D +IK IG G +G+V+RA+ G VA+K L + E
Sbjct: 23 FQGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNE- 80
Query: 554 FQTEARLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRV 613
F E ++ ++RH NIV G + ++ EY+ RGSL+ +L +LD +R+
Sbjct: 81 FLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRL 140
Query: 614 NIVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLV 673
++ +A ++YLH + P IVHR+ V DFGL+RL +
Sbjct: 141 SMAYDVAKGMNYLH-NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSA 199
Query: 674 VGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHP 712
GT ++APE+ EK DVYSFGV+ E+ P
Sbjct: 200 AGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQP 238
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 103/206 (50%), Gaps = 9/206 (4%)
Query: 508 EDFHIKYCIGTGGYGSVYRAQLSSGKLV-ALKKLHRSETEEPAFLESFQTEARLLSQIRH 566
EDF I +G G +G+VY A+ K + ALK L +++ E+ + E + S +RH
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 567 RNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYL 626
NI++LYG+ ++LI EY G+++ L+ + D + + +A+ALSY
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQ---KLSRFDEQRTATYITELANALSYC 128
Query: 627 HYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAY 686
H ++HRD E +ADFG + +H SS R + GT Y+ PE+
Sbjct: 129 H---SKRVIHRDIKPENLLLGSNGELKIADFGWS--VHAPSSRRDTLCGTLDYLPPEMIE 183
Query: 687 TMAVTEKCDVYSFGVVALEVLMGSHP 712
EK D++S GV+ E L+G P
Sbjct: 184 GRMHDEKVDLWSLGVLCYEFLVGMPP 209
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 104/206 (50%), Gaps = 9/206 (4%)
Query: 508 EDFHIKYCIGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRH 566
+DF I +G G +G+VY A + S +VALK L +S+ E+ + E + + + H
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHH 82
Query: 567 RNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYL 626
NI++LY + + ++LI EY RG L+ L+ ++ D + I++ +A AL Y
Sbjct: 83 PNILRLYNYFYDRRRIYLILEYAPRGELYKELQ---KSCTFDEQRTATIMEELADALMYC 139
Query: 627 HYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAY 686
H ++HRD E +ADFG + +H S R + GT Y+ PE+
Sbjct: 140 H---GKKVIHRDIKPENLLLGLKGELKIADFGWS--VHAPSLRRKTMCGTLDYLPPEMIE 194
Query: 687 TMAVTEKCDVYSFGVVALEVLMGSHP 712
EK D++ GV+ E+L+G+ P
Sbjct: 195 GRMHNEKVDLWCIGVLCYELLVGNPP 220
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 102/208 (49%), Gaps = 9/208 (4%)
Query: 508 EDFHIKYCIGTGGYGSVYRAQLSSGKLV-ALKKLHRSETEEPAFLESFQTEARLLSQIRH 566
+DF I +G G +G+VY A+ K + ALK L +S+ E+ + E + S +RH
Sbjct: 15 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 74
Query: 567 RNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYL 626
NI+++Y + K ++L+ E+ RG L+ L+ + D + ++ +A AL Y
Sbjct: 75 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQ---KHGRFDEQRSATFMEELADALHYC 131
Query: 627 HYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAY 686
H + ++HRD E +ADFG + +H S R + GT Y+ PE+
Sbjct: 132 H---ERKVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRXMCGTLDYLPPEMIE 186
Query: 687 TMAVTEKCDVYSFGVVALEVLMGSHPTD 714
EK D++ GV+ E L+G P D
Sbjct: 187 GKTHDEKVDLWCAGVLCYEFLVGMPPFD 214
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 102/208 (49%), Gaps = 9/208 (4%)
Query: 508 EDFHIKYCIGTGGYGSVYRAQLSSGKLV-ALKKLHRSETEEPAFLESFQTEARLLSQIRH 566
+DF I +G G +G+VY A+ K + ALK L +S+ E+ + E + S +RH
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 567 RNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYL 626
NI+++Y + K ++L+ E+ RG L+ L+ + D + ++ +A AL Y
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQ---KHGRFDEQRSATFMEELADALHYC 130
Query: 627 HYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAY 686
H + ++HRD E +ADFG + +H S R + GT Y+ PE+
Sbjct: 131 H---ERKVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRXMCGTLDYLPPEMIE 185
Query: 687 TMAVTEKCDVYSFGVVALEVLMGSHPTD 714
EK D++ GV+ E L+G P D
Sbjct: 186 GKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 102/199 (51%), Gaps = 12/199 (6%)
Query: 516 IGTGGYGSVYRAQLSSGKLVALKKLHRS---ETEEPAFLESFQTEARLLSQIRHRNIVKL 572
+G GG+G VY+ +++ VA+KKL TEE + F E +++++ +H N+V+L
Sbjct: 39 MGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEE--LKQQFDQEIKVMAKCQHENLVEL 95
Query: 573 YGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKP 632
GF + L+Y YM GSL L L W R I + A+ +++LH +
Sbjct: 96 LGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH- 154
Query: 633 SIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSN--RTLVVGTYGYIAPELAYTMAV 690
+HRD A ++DFGLAR + + +VGT Y+APE A +
Sbjct: 155 --IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPE-ALRGEI 211
Query: 691 TEKCDVYSFGVVALEVLMG 709
T K D+YSFGVV LE++ G
Sbjct: 212 TPKSDIYSFGVVLLEIITG 230
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 102/208 (49%), Gaps = 9/208 (4%)
Query: 508 EDFHIKYCIGTGGYGSVYRAQLSSGKLV-ALKKLHRSETEEPAFLESFQTEARLLSQIRH 566
+DF I +G G +G+VY A+ K + ALK L +S+ E+ + E + S +RH
Sbjct: 14 DDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 567 RNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYL 626
NI+++Y + K ++L+ E+ RG L+ L+ + D + ++ +A AL Y
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQ---KHGRFDEQRSATFMEELADALHYC 130
Query: 627 HYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAY 686
H + ++HRD E +ADFG + +H S R + GT Y+ PE+
Sbjct: 131 H---ERKVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRXMCGTLDYLPPEMIE 185
Query: 687 TMAVTEKCDVYSFGVVALEVLMGSHPTD 714
EK D++ GV+ E L+G P D
Sbjct: 186 GKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 101/199 (50%), Gaps = 12/199 (6%)
Query: 516 IGTGGYGSVYRAQLSSGKLVALKKLHRS---ETEEPAFLESFQTEARLLSQIRHRNIVKL 572
+G GG+G VY+ +++ VA+KKL TEE + F E +++++ +H N+V+L
Sbjct: 39 MGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEE--LKQQFDQEIKVMAKCQHENLVEL 95
Query: 573 YGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKP 632
GF + L+Y YM GSL L L W R I + A+ +++LH +
Sbjct: 96 LGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH- 154
Query: 633 SIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSN--RTLVVGTYGYIAPELAYTMAV 690
+HRD A ++DFGLAR + +VGT Y+APE A +
Sbjct: 155 --IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPE-ALRGEI 211
Query: 691 TEKCDVYSFGVVALEVLMG 709
T K D+YSFGVV LE++ G
Sbjct: 212 TPKSDIYSFGVVLLEIITG 230
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 101/199 (50%), Gaps = 12/199 (6%)
Query: 516 IGTGGYGSVYRAQLSSGKLVALKKLHRS---ETEEPAFLESFQTEARLLSQIRHRNIVKL 572
+G GG+G VY+ +++ VA+KKL TEE + F E +++++ +H N+V+L
Sbjct: 33 MGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEE--LKQQFDQEIKVMAKCQHENLVEL 89
Query: 573 YGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKP 632
GF + L+Y YM GSL L L W R I + A+ +++LH +
Sbjct: 90 LGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH- 148
Query: 633 SIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSN--RTLVVGTYGYIAPELAYTMAV 690
+HRD A ++DFGLAR + +VGT Y+APE A +
Sbjct: 149 --IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPE-ALRGEI 205
Query: 691 TEKCDVYSFGVVALEVLMG 709
T K D+YSFGVV LE++ G
Sbjct: 206 TPKSDIYSFGVVLLEIITG 224
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 14/212 (6%)
Query: 509 DFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRN 568
+ ++ IG GG+G VYRA ++ H + + +E+ + EA+L + ++H N
Sbjct: 8 ELTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPN 67
Query: 569 IVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHY 628
I+ L G CL + L+ E+ G L VL ++ VN +A ++YLH
Sbjct: 68 IIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDI----LVNWAVQIARGMNYLHD 123
Query: 629 DCKPSIVHRDXXXXXXXXXXXXE--------AFVADFGLARLLHPDSSNRTLVVGTYGYI 680
+ I+HRD E + DFGLAR H + + G Y ++
Sbjct: 124 EAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWH--RTTKMSAAGAYAWM 181
Query: 681 APELAYTMAVTEKCDVYSFGVVALEVLMGSHP 712
APE+ ++ DV+S+GV+ E+L G P
Sbjct: 182 APEVIRASMFSKGSDVWSYGVLLWELLTGEVP 213
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 103/207 (49%), Gaps = 23/207 (11%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
+G G +G + +G+++ +K+L R + E +F E +++ + H N++K G
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQ---RTFLKEVKVMRCLEHPNVLKFIG 74
Query: 575 FCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSI 634
+K + I EY++ G+L ++++ + W++RV+ K +A ++YLH +I
Sbjct: 75 VLYKDKRLNFITEYIKGGTLRGIIKS--MDSQYPWSQRVSFAKDIASGMAYLH---SMNI 129
Query: 635 VHRDXXXXXXXXXXXXEAFVADFGLARLL--------------HPDSSNRTLVVGTYGYI 680
+HRD VADFGLARL+ PD R VVG ++
Sbjct: 130 IHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWM 189
Query: 681 APELAYTMAVTEKCDVYSFGVVALEVL 707
APE+ + EK DV+SFG+V E++
Sbjct: 190 APEMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 104/208 (50%), Gaps = 12/208 (5%)
Query: 508 EDFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHR 567
++ ++ +G G +G V +A+ + K VA+K++ SE+E AF+ E R LS++ H
Sbjct: 9 KEIEVEEVVGRGAFGVVCKAKWRA-KDVAIKQI-ESESERKAFI----VELRQLSRVNHP 62
Query: 568 NIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLH 627
NIVKLYG CL+ C L+ EY E GSL+ VL ++ + ++YLH
Sbjct: 63 NIVKLYGACLNPVC--LVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLH 120
Query: 628 YDCKPSIVHRDXXXXXXXXXXXXEAF-VADFGLARLLHPDSSNRTLVVGTYGYIAPELAY 686
+++HRD + DFG A + +N G+ ++APE+
Sbjct: 121 SMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNK---GSAAWMAPEVFE 177
Query: 687 TMAVTEKCDVYSFGVVALEVLMGSHPTD 714
+EKCDV+S+G++ EV+ P D
Sbjct: 178 GSNYSEKCDVFSWGIILWEVITRRKPFD 205
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 97/198 (48%), Gaps = 12/198 (6%)
Query: 517 GTGGYGSVYRAQLSSGKLVALKKLHRS---ETEEPAFLESFQTEARLLSQIRHRNIVKLY 573
G GG+G VY+ +++ VA+KKL TEE + F E ++ ++ +H N+V+L
Sbjct: 31 GEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEE--LKQQFDQEIKVXAKCQHENLVELL 87
Query: 574 GFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPS 633
GF + L+Y Y GSL L L W R I + A+ +++LH +
Sbjct: 88 GFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFLHENHH-- 145
Query: 634 IVHRDXXXXXXXXXXXXEAFVADFGLARLLH--PDSSNRTLVVGTYGYIAPELAYTMAVT 691
+HRD A ++DFGLAR + +VGT Y APE A +T
Sbjct: 146 -IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPE-ALRGEIT 203
Query: 692 EKCDVYSFGVVALEVLMG 709
K D+YSFGVV LE++ G
Sbjct: 204 PKSDIYSFGVVLLEIITG 221
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 104/208 (50%), Gaps = 12/208 (5%)
Query: 508 EDFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHR 567
++ ++ +G G +G V +A+ + K VA+K++ SE+E AF+ E R LS++ H
Sbjct: 8 KEIEVEEVVGRGAFGVVCKAKWRA-KDVAIKQI-ESESERKAFI----VELRQLSRVNHP 61
Query: 568 NIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLH 627
NIVKLYG CL+ C L+ EY E GSL+ VL ++ + ++YLH
Sbjct: 62 NIVKLYGACLNPVC--LVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLH 119
Query: 628 YDCKPSIVHRDXXXXXXXXXXXXEAF-VADFGLARLLHPDSSNRTLVVGTYGYIAPELAY 686
+++HRD + DFG A + +N G+ ++APE+
Sbjct: 120 SMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNK---GSAAWMAPEVFE 176
Query: 687 TMAVTEKCDVYSFGVVALEVLMGSHPTD 714
+EKCDV+S+G++ EV+ P D
Sbjct: 177 GSNYSEKCDVFSWGIILWEVITRRKPFD 204
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 7/210 (3%)
Query: 503 MIEATEDFHIKYCIGTGGYGSVYRAQL-SSGKLVALKKLHRSETEEPAFLESFQTEARLL 561
M ED+ + Y IGTG YG + + S GK++ K+L E A + +E LL
Sbjct: 1 MPSRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTE-AEKQMLVSEVNLL 59
Query: 562 SQIRHRNIVKLYGFCLH--NKCMFLIYEYMERGSLFCVL-RNDVEAVELDWTKRVNIVKS 618
+++H NIV+ Y + N ++++ EY E G L V+ + E LD + ++
Sbjct: 60 RELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQ 119
Query: 619 MAHALSYLHY--DCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGT 676
+ AL H D +++HRD + DFGLAR+L+ D+S VGT
Sbjct: 120 LTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGT 179
Query: 677 YGYIAPELAYTMAVTEKCDVYSFGVVALEV 706
Y++PE M+ EK D++S G + E+
Sbjct: 180 PYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 7/210 (3%)
Query: 503 MIEATEDFHIKYCIGTGGYGSVYRAQL-SSGKLVALKKLHRSETEEPAFLESFQTEARLL 561
M ED+ + Y IGTG YG + + S GK++ K+L E A + +E LL
Sbjct: 1 MPSRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTE-AEKQMLVSEVNLL 59
Query: 562 SQIRHRNIVKLYGFCLH--NKCMFLIYEYMERGSLFCVL-RNDVEAVELDWTKRVNIVKS 618
+++H NIV+ Y + N ++++ EY E G L V+ + E LD + ++
Sbjct: 60 RELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQ 119
Query: 619 MAHALSYLHY--DCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGT 676
+ AL H D +++HRD + DFGLAR+L+ D+S VGT
Sbjct: 120 LTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGT 179
Query: 677 YGYIAPELAYTMAVTEKCDVYSFGVVALEV 706
Y++PE M+ EK D++S G + E+
Sbjct: 180 PYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 91/174 (52%), Gaps = 12/174 (6%)
Query: 111 FGNLKDLDQLRLQGNKLD--GL-------IPSSIGNLTNLTYLDLS-LNQLSGRLPQEVG 160
G L D D + N LD GL IPSS+ NL L +L + +N L G +P +
Sbjct: 39 LGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIA 98
Query: 161 NLKNLKSLFLDNNHLSGPIPSTLYHLNQLATLCLGYNKLVGPVTKEVGNMKNLDRLHLNG 220
L L L++ + ++SG IP L + L TL YN L G + + ++ NL + +G
Sbjct: 99 KLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDG 158
Query: 221 NNLTGSIPSTIG-YLNLLDELHLSHNRLDGPIPPTIGNLTNLIALDLSSNQLSG 273
N ++G+IP + G + L + +S NRL G IPPT NL NL +DLS N L G
Sbjct: 159 NRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANL-NLAFVDLSRNMLEG 211
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 103/223 (46%), Gaps = 27/223 (12%)
Query: 31 LSGRMPSEIGALSKLEKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTGTIPSEXXXX 90
L G +P I L++L L ++H +++G IP + + L LD SYN L+GT+P
Sbjct: 89 LVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPP----- 143
Query: 91 XXXXXXXXXXXXXXXXXPLEFGNLKDLDQLRLQGNKLDGLIPSSIGNLTNL-TYLDLSLN 149
+L +L + GN++ G IP S G+ + L T + +S N
Sbjct: 144 -------------------SISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRN 184
Query: 150 QLSGRLPQEVGNLKNLKSLFLDNNHLSGPIPSTLYHLNQLATLCLGYNKLVGPVTKEVGN 209
+L+G++P NL NL + L N L G + L N L + K VG
Sbjct: 185 RLTGKIPPTFANL-NLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGL 242
Query: 210 MKNLDRLHLNGNNLTGSIPSTIGYLNLLDELHLSHNRLDGPIP 252
KNL+ L L N + G++P + L L L++S N L G IP
Sbjct: 243 SKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP 285
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 102/221 (46%), Gaps = 4/221 (1%)
Query: 178 PIPSTLYHLNQLATLCLG-YNKLVGPVTKEVGNMKNLDRLHLNGNNLTGSIPSTIGYLNL 236
PIPS+L +L L L +G N LVGP+ + + L L++ N++G+IP + +
Sbjct: 67 PIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKT 126
Query: 237 LDELHLSHNRLDGPIPPTIGNLTNLIALDLSSNQLSGLLPREVGNL-KYLASLSLNGNIL 295
L L S+N L G +PP+I +L NL+ + N++SG +P G+ K S++++ N L
Sbjct: 127 LVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRL 186
Query: 296 IGPIPPTIXXXXXXXXXXXXXXRLSSSIPPELMNCXXXXXXXXXXXXXXXXIPSEIGNLI 355
G IPPT + L ++G
Sbjct: 187 TGKIPPTF--ANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSK 244
Query: 356 FFRQLDLSRNFINGTIPSQLGKIPNISAVDLSKNNLSGVIP 396
LDL N I GT+P L ++ + ++++S NNL G IP
Sbjct: 245 NLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP 285
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 95/194 (48%), Gaps = 3/194 (1%)
Query: 108 PLEFGNLKDLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNLKS 167
P L L L + + G IP + + L LD S N LSG LP + +L NL
Sbjct: 94 PPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVG 153
Query: 168 LFLDNNHLSGPIPSTLYHLNQLAT-LCLGYNKLVGPVTKEVGNMKNLDRLHLNGNNLTGS 226
+ D N +SG IP + ++L T + + N+L G + N+ NL + L+ N L G
Sbjct: 154 ITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANL-NLAFVDLSRNMLEGD 212
Query: 227 IPSTIGYLNLLDELHLSHNRLDGPIPPTIGNLTNLIALDLSSNQLSGLLPREVGNLKYLA 286
G ++HL+ N L + +G NL LDL +N++ G LP+ + LK+L
Sbjct: 213 ASVLFGSDKNTQKIHLAKNSLAFDL-GKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLH 271
Query: 287 SLSLNGNILIGPIP 300
SL+++ N L G IP
Sbjct: 272 SLNVSFNNLCGEIP 285
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 95/209 (45%), Gaps = 30/209 (14%)
Query: 213 LDRLHLNGNNLTGS--IPSTIGYLNLLDELHLSH-NRLDGPIPPTIGNLTNLIALDLSSN 269
++ L L+G NL IPS++ L L+ L++ N L GPIPP I LT L L ++
Sbjct: 52 VNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHT 111
Query: 270 QLSGLLPREVGNLKYLASLSLNGNILIGPIPPTIXXXXXXXXXXXXXXRLSSSIPPELMN 329
+SG +P + +K L +L + N L G +PP+I R+S +IP +
Sbjct: 112 NVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGS 171
Query: 330 CXXXXXXXXXXXXXXXXIPSEIGNLIFFRQLDLSRNFINGTIPSQLGKIPNISAVDLSKN 389
F + +SRN + G IP + N++ VDLS+N
Sbjct: 172 FSK-----------------------LFTSMTISRNRLTGKIPPTFANL-NLAFVDLSRN 207
Query: 390 NLSG---VIPASVRRIPKLIVSENNLELE 415
L G V+ S + K+ +++N+L +
Sbjct: 208 MLEGDASVLFGSDKNTQKIHLAKNSLAFD 236
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 111/222 (50%), Gaps = 22/222 (9%)
Query: 506 ATEDFHIKYCIGTGGYGSVYRAQLSSGK-LVALKKL----HRSETEEPAFLESFQTEARL 560
A + + IG GG+G V++ +L K +VA+K L ETE + FQ E +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 561 LSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMA 620
+S + H NIVKLYG +HN ++ E++ G L+ L + ++ W+ ++ ++ +A
Sbjct: 77 MSNLNHPNIVKLYGL-MHNPPR-MVMEFVPCGDLYHRLLDKAHPIK--WSVKLRLMLDIA 132
Query: 621 HALSYLHYDCKPSIVHRDXXXXXXXXXXXXE-----AFVADFGLARL-LHPDSSNRTLVV 674
+ Y+ + P IVHRD E A VADFGL++ +H S ++
Sbjct: 133 LGIEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSG----LL 187
Query: 675 GTYGYIAPEL--AYTMAVTEKCDVYSFGVVALEVLMGSHPTD 714
G + ++APE A + TEK D YSF ++ +L G P D
Sbjct: 188 GNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 101/209 (48%), Gaps = 11/209 (5%)
Query: 505 EATEDFHIKYCIGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQ 563
+ E F + +G G YGSVY+A +G++VA+K++ L+ E ++ Q
Sbjct: 26 QPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESD-----LQEIIKEISIMQQ 80
Query: 564 IRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHAL 623
++VK YG N ++++ EY GS+ ++R + + D + I++S L
Sbjct: 81 CDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTED--EIATILQSTLKGL 138
Query: 624 SYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPE 683
YLH+ K +HRD A +ADFG+A L + R V+GT ++APE
Sbjct: 139 EYLHFMRK---IHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPE 195
Query: 684 LAYTMAVTEKCDVYSFGVVALEVLMGSHP 712
+ + D++S G+ A+E+ G P
Sbjct: 196 VIQEIGYNCVADIWSLGITAIEMAEGKPP 224
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 100/210 (47%), Gaps = 7/210 (3%)
Query: 503 MIEATEDFHIKYCIGTGGYGSVYRAQL-SSGKLVALKKLHRSETEEPAFLESFQTEARLL 561
M ED+ + Y IGTG YG + + S GK++ K+L E A + +E LL
Sbjct: 1 MPSRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTE-AEKQMLVSEVNLL 59
Query: 562 SQIRHRNIVKLYGFCLH--NKCMFLIYEYMERGSLFCVL-RNDVEAVELDWTKRVNIVKS 618
+++H NIV+ Y + N ++++ EY E G L V+ + E LD + ++
Sbjct: 60 RELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQ 119
Query: 619 MAHALSYLHY--DCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGT 676
+ AL H D +++HRD + DFGLAR+L+ D VGT
Sbjct: 120 LTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVGT 179
Query: 677 YGYIAPELAYTMAVTEKCDVYSFGVVALEV 706
Y++PE M+ EK D++S G + E+
Sbjct: 180 PYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 100/211 (47%), Gaps = 6/211 (2%)
Query: 505 EATEDFHIKYCIGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQ 563
E EDF + +G G + VYRA+ + +G VA+K + + + ++ Q E ++ Q
Sbjct: 8 EKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQ 67
Query: 564 IRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHAL 623
++H +I++LY + + ++L+ E G + L+N V+ + + + + + +
Sbjct: 68 LKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEAR--HFMHQIITGM 125
Query: 624 SYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPE 683
YLH I+HRD +ADFGLA L + GT YI+PE
Sbjct: 126 LYLH---SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPE 182
Query: 684 LAYTMAVTEKCDVYSFGVVALEVLMGSHPTD 714
+A A + DV+S G + +L+G P D
Sbjct: 183 IATRSAHGLESDVWSLGCMFYTLLIGRPPFD 213
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 110/222 (49%), Gaps = 22/222 (9%)
Query: 506 ATEDFHIKYCIGTGGYGSVYRAQLSSGK-LVALKKL----HRSETEEPAFLESFQTEARL 560
A + + IG GG+G V++ +L K +VA+K L ETE + FQ E +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 561 LSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMA 620
+S + H NIVKLYG +HN ++ E++ G L+ L + ++ W+ ++ ++ +A
Sbjct: 77 MSNLNHPNIVKLYGL-MHNPPR-MVMEFVPCGDLYHRLLDKAHPIK--WSVKLRLMLDIA 132
Query: 621 HALSYLHYDCKPSIVHRDXXXXXXXXXXXXE-----AFVADFGLARL-LHPDSSNRTLVV 674
+ Y+ + P IVHRD E A VADFG ++ +H S ++
Sbjct: 133 LGIEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHSVSG----LL 187
Query: 675 GTYGYIAPEL--AYTMAVTEKCDVYSFGVVALEVLMGSHPTD 714
G + ++APE A + TEK D YSF ++ +L G P D
Sbjct: 188 GNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 105/234 (44%), Gaps = 28/234 (11%)
Query: 499 TFEEMIEATEDF---------HIKYCIGTGGYGSVYRAQLS-SGK---LVALKKLHRSET 545
TFE+ EA +F I+ IG G +G V L GK VA+K L T
Sbjct: 15 TFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYT 74
Query: 546 EEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLR-NDVEA 604
E+ F +EA ++ Q H N++ L G + + +I E+ME GSL LR ND +
Sbjct: 75 EKQR--RDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQF 132
Query: 605 VELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLH 664
+ + V +++ +A + YL + VHRD V+DFGL+R L
Sbjct: 133 TVI---QLVGMLRGIAAGMKYL---ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLE 186
Query: 665 PDSSNRTLVVGTYG-----YIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHP 712
D+S+ T G + APE T DV+S+G+V EV+ G P
Sbjct: 187 DDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 240
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 94/206 (45%), Gaps = 16/206 (7%)
Query: 516 IGTGGYGSVYRAQL--SSGKL---VALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIV 570
IG G +G VY+ L SSGK VA+K L TE+ F EA ++ Q H NI+
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRV--DFLGEAGIMGQFSHHNII 109
Query: 571 KLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDC 630
+L G K M +I EYME G+L LR + E + V +++ +A + YL
Sbjct: 110 RLEGVISKYKPMMIITEYMENGALDKFLRE--KDGEFSVLQLVGMLRGIAAGMKYL---A 164
Query: 631 KPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVG---TYGYIAPELAYT 687
+ VHRD V+DFGL+R+L D G + APE
Sbjct: 165 NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISY 224
Query: 688 MAVTEKCDVYSFGVVALEVLM-GSHP 712
T DV+SFG+V EV+ G P
Sbjct: 225 RKFTSASDVWSFGIVMWEVMTYGERP 250
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 110/222 (49%), Gaps = 22/222 (9%)
Query: 506 ATEDFHIKYCIGTGGYGSVYRAQLSSGK-LVALKKL----HRSETEEPAFLESFQTEARL 560
A + + IG GG+G V++ +L K +VA+K L ETE + FQ E +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 561 LSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMA 620
+S + H NIVKLYG +HN ++ E++ G L+ L + ++ W+ ++ ++ +A
Sbjct: 77 MSNLNHPNIVKLYGL-MHNPPR-MVMEFVPCGDLYHRLLDKAHPIK--WSVKLRLMLDIA 132
Query: 621 HALSYLHYDCKPSIVHRDXXXXXXXXXXXXE-----AFVADFGLARL-LHPDSSNRTLVV 674
+ Y+ + P IVHRD E A VADF L++ +H S ++
Sbjct: 133 LGIEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHSVSG----LL 187
Query: 675 GTYGYIAPEL--AYTMAVTEKCDVYSFGVVALEVLMGSHPTD 714
G + ++APE A + TEK D YSF ++ +L G P D
Sbjct: 188 GNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 95/198 (47%), Gaps = 10/198 (5%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
IG G +G V++ + K+VA+K + E E +E Q E +LSQ + K YG
Sbjct: 30 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAE--DEIEDIQQEITVLSQCDSPYVTKYYG 87
Query: 575 FCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSI 634
L + +++I EY+ GS +L E LD T+ I++ + L YLH + K
Sbjct: 88 SYLKDTKLWIIMEYLGGGSALDLL----EPGPLDETQIATILREILKGLDYLHSEKK--- 140
Query: 635 VHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYTMAVTEKC 694
+HRD E +ADFG+A L R VGT ++APE+ A K
Sbjct: 141 IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKA 200
Query: 695 DVYSFGVVALEVLMGSHP 712
D++S G+ A+E+ G P
Sbjct: 201 DIWSLGITAIELARGEPP 218
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 95/198 (47%), Gaps = 10/198 (5%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
IG G +G V++ + K+VA+K + E E +E Q E +LSQ + K YG
Sbjct: 35 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAE--DEIEDIQQEITVLSQCDSPYVTKYYG 92
Query: 575 FCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSI 634
L + +++I EY+ GS +L E LD T+ I++ + L YLH + K
Sbjct: 93 SYLKDTKLWIIMEYLGGGSALDLL----EPGPLDETQIATILREILKGLDYLHSEKK--- 145
Query: 635 VHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYTMAVTEKC 694
+HRD E +ADFG+A L R VGT ++APE+ A K
Sbjct: 146 IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKA 205
Query: 695 DVYSFGVVALEVLMGSHP 712
D++S G+ A+E+ G P
Sbjct: 206 DIWSLGITAIELARGEPP 223
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 108/228 (47%), Gaps = 20/228 (8%)
Query: 496 GRITFEEMIEATEDFHIKYCIGTGGYGSVYRAQLSS-GK---LVALKKLHRSETEEPAFL 551
G + F + I+ + I+ IG G +G V R +L + GK VA+K L TE
Sbjct: 3 GSMEFAKEIDVSY-VKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQR-- 59
Query: 552 ESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLR-NDVEAVELDWT 610
F +EA ++ Q H NI++L G ++ + ++ E+ME G+L LR ND + +
Sbjct: 60 REFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVI--- 116
Query: 611 KRVNIVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNR 670
+ V +++ +A + YL + S VHRD V+DFGL+R L +SS+
Sbjct: 117 QLVGMLRGIASGMRYL---AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDP 173
Query: 671 TLVVGTYG-----YIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHP 712
T G + APE T D +S+G+V EV+ G P
Sbjct: 174 TYTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERP 221
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 95/198 (47%), Gaps = 10/198 (5%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
IG G +G V++ + K+VA+K + E E +E Q E +LSQ + K YG
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAE--DEIEDIQQEITVLSQCDSPYVTKYYG 72
Query: 575 FCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSI 634
L + +++I EY+ GS +L E LD T+ I++ + L YLH + K
Sbjct: 73 SYLKDTKLWIIMEYLGGGSALDLL----EPGPLDETQIATILREILKGLDYLHSEKK--- 125
Query: 635 VHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYTMAVTEKC 694
+HRD E +ADFG+A L R VGT ++APE+ A K
Sbjct: 126 IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKA 185
Query: 695 DVYSFGVVALEVLMGSHP 712
D++S G+ A+E+ G P
Sbjct: 186 DIWSLGITAIELARGEPP 203
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 95/198 (47%), Gaps = 10/198 (5%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
IG G +G V++ + K+VA+K + E E +E Q E +LSQ + K YG
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAE--DEIEDIQQEITVLSQCDSPYVTKYYG 72
Query: 575 FCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSI 634
L + +++I EY+ GS +L E LD T+ I++ + L YLH + K
Sbjct: 73 SYLKDTKLWIIMEYLGGGSALDLL----EPGPLDETQIATILREILKGLDYLHSEKK--- 125
Query: 635 VHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYTMAVTEKC 694
+HRD E +ADFG+A L R VGT ++APE+ A K
Sbjct: 126 IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKA 185
Query: 695 DVYSFGVVALEVLMGSHP 712
D++S G+ A+E+ G P
Sbjct: 186 DIWSLGITAIELARGEPP 203
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 101/212 (47%), Gaps = 19/212 (8%)
Query: 512 IKYCIGTGGYGSVYRAQLSS-GK---LVALKKLHRSETEEPAFLESFQTEARLLSQIRHR 567
I+ IG G +G V R +L + GK VA+K L TE F +EA ++ Q H
Sbjct: 20 IEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQR--REFLSEASIMGQFEHP 77
Query: 568 NIVKLYGFCLHNKCMFLIYEYMERGSLFCVLR-NDVEAVELDWTKRVNIVKSMAHALSYL 626
NI++L G ++ + ++ E+ME G+L LR ND + + + V +++ +A + YL
Sbjct: 78 NIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVI---QLVGMLRGIASGMRYL 134
Query: 627 HYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYG-----YIA 681
+ S VHRD V+DFGL+R L +SS+ T G + A
Sbjct: 135 ---AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTA 191
Query: 682 PELAYTMAVTEKCDVYSFGVVALEVL-MGSHP 712
PE T D +S+G+V EV+ G P
Sbjct: 192 PEAIAFRKFTSASDAWSYGIVMWEVMSFGERP 223
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 95/193 (49%), Gaps = 10/193 (5%)
Query: 516 IGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGF 575
+G G +G V+ + VA+K L + AFL EA L+ Q++H+ +V+LY
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFL----AEANLMKQLQHQRLVRLYA- 83
Query: 576 CLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIV 635
+ + +++I EYME GSL L+ ++L K +++ +A ++++ + + +
Sbjct: 84 VVTQEPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIE---ERNYI 139
Query: 636 HRDXXXXXXXXXXXXEAFVADFGLARLLHP-DSSNRTLVVGTYGYIAPELAYTMAVTEKC 694
HRD +ADFGLARL+ + + R + APE T K
Sbjct: 140 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 199
Query: 695 DVYSFGVVALEVL 707
DV+SFG++ E++
Sbjct: 200 DVWSFGILLTEIV 212
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 95/193 (49%), Gaps = 10/193 (5%)
Query: 516 IGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGF 575
+G G +G V+ + VA+K L + AFL EA L+ Q++H+ +V+LY
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFL----AEANLMKQLQHQRLVRLYA- 84
Query: 576 CLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIV 635
+ + +++I EYME GSL L+ ++L K +++ +A ++++ + + +
Sbjct: 85 VVTQEPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIE---ERNYI 140
Query: 636 HRDXXXXXXXXXXXXEAFVADFGLARLLHP-DSSNRTLVVGTYGYIAPELAYTMAVTEKC 694
HRD +ADFGLARL+ + + R + APE T K
Sbjct: 141 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 200
Query: 695 DVYSFGVVALEVL 707
DV+SFG++ E++
Sbjct: 201 DVWSFGILLTEIV 213
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 94/193 (48%), Gaps = 9/193 (4%)
Query: 516 IGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGF 575
+G G +G V+ ++ VA+K L AFLE EA L+ ++H +V+LY
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLE----EANLMKTLQHDKLVRLYAV 76
Query: 576 CLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIV 635
+ +++I EYM +GSL L++D E ++ K ++ +A ++Y+ + + +
Sbjct: 77 VTREEPIYIITEYMAKGSLLDFLKSD-EGGKVLLPKLIDFSAQIAEGMAYIE---RKNYI 132
Query: 636 HRDXXXXXXXXXXXXEAFVADFGLARLLHPDS-SNRTLVVGTYGYIAPELAYTMAVTEKC 694
HRD +ADFGLAR++ + + R + APE T K
Sbjct: 133 HRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKS 192
Query: 695 DVYSFGVVALEVL 707
DV+SFG++ E++
Sbjct: 193 DVWSFGILLYEIV 205
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 93/198 (46%), Gaps = 10/198 (5%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
IG G +G V++ + ++VA+K + E E +E Q E +LSQ + K YG
Sbjct: 31 IGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAE--DEIEDIQQEITVLSQCDSSYVTKYYG 88
Query: 575 FCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSI 634
L +++I EY+ GS +LR A D + ++K + L YLH + K
Sbjct: 89 SYLKGSKLWIIMEYLGGGSALDLLR----AGPFDEFQIATMLKEILKGLDYLHSEKK--- 141
Query: 635 VHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYTMAVTEKC 694
+HRD + +ADFG+A L R VGT ++APE+ A K
Sbjct: 142 IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKA 201
Query: 695 DVYSFGVVALEVLMGSHP 712
D++S G+ A+E+ G P
Sbjct: 202 DIWSLGITAIELAKGEPP 219
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 95/193 (49%), Gaps = 10/193 (5%)
Query: 516 IGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGF 575
+G G +G V+ + VA+K L + AFL EA L+ Q++H+ +V+LY
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFL----AEANLMKQLQHQRLVRLYA- 81
Query: 576 CLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIV 635
+ + +++I EYME GSL L+ ++L K +++ +A ++++ + + +
Sbjct: 82 VVTQEPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIE---ERNYI 137
Query: 636 HRDXXXXXXXXXXXXEAFVADFGLARLLHP-DSSNRTLVVGTYGYIAPELAYTMAVTEKC 694
HRD +ADFGLARL+ + + R + APE T K
Sbjct: 138 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 197
Query: 695 DVYSFGVVALEVL 707
DV+SFG++ E++
Sbjct: 198 DVWSFGILLTEIV 210
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 98/206 (47%), Gaps = 22/206 (10%)
Query: 509 DFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRN 568
D +K+ +G G YG VY L K + +T E +E F EA ++ +I+H N
Sbjct: 15 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKHPN 71
Query: 569 IVKLYGFCLHNKCMFLIYEYMERGSLFCVL----RNDVEAVELDWTKRVNIVKSMAHALS 624
+V+L G C ++I E+M G+L L R +V AV L + + ++ A+
Sbjct: 72 LVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAME 126
Query: 625 YLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGT---YGYIA 681
YL K + +HRD VADFGL+RL+ D+ T G + A
Sbjct: 127 YLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX--TAHAGAKFPIKWTA 181
Query: 682 PE-LAYTMAVTEKCDVYSFGVVALEV 706
PE LAY + K DV++FGV+ E+
Sbjct: 182 PESLAYN-KFSIKSDVWAFGVLLWEI 206
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 95/193 (49%), Gaps = 10/193 (5%)
Query: 516 IGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGF 575
+G G +G V+ + VA+K L + AFL EA L+ Q++H+ +V+LY
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFL----AEANLMKQLQHQRLVRLYA- 77
Query: 576 CLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIV 635
+ + +++I EYME GSL L+ ++L K +++ +A ++++ + + +
Sbjct: 78 VVTQEPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIE---ERNYI 133
Query: 636 HRDXXXXXXXXXXXXEAFVADFGLARLLHP-DSSNRTLVVGTYGYIAPELAYTMAVTEKC 694
HRD +ADFGLARL+ + + R + APE T K
Sbjct: 134 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 193
Query: 695 DVYSFGVVALEVL 707
DV+SFG++ E++
Sbjct: 194 DVWSFGILLTEIV 206
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 95/193 (49%), Gaps = 10/193 (5%)
Query: 516 IGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGF 575
+G G +G V+ + VA+K L + AFL EA L+ Q++H+ +V+LY
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFL----AEANLMKQLQHQRLVRLYA- 75
Query: 576 CLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIV 635
+ + +++I EYME GSL L+ ++L K +++ +A ++++ + + +
Sbjct: 76 VVTQEPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIE---ERNYI 131
Query: 636 HRDXXXXXXXXXXXXEAFVADFGLARLLHP-DSSNRTLVVGTYGYIAPELAYTMAVTEKC 694
HRD +ADFGLARL+ + + R + APE T K
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 695 DVYSFGVVALEVL 707
DV+SFG++ E++
Sbjct: 192 DVWSFGILLTEIV 204
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 95/193 (49%), Gaps = 10/193 (5%)
Query: 516 IGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGF 575
+G G +G V+ + VA+K L + AFL EA L+ Q++H+ +V+LY
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFL----AEANLMKQLQHQRLVRLYA- 81
Query: 576 CLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIV 635
+ + +++I EYME GSL L+ ++L K +++ +A ++++ + + +
Sbjct: 82 VVTQEPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIE---ERNYI 137
Query: 636 HRDXXXXXXXXXXXXEAFVADFGLARLLHPDS-SNRTLVVGTYGYIAPELAYTMAVTEKC 694
HRD +ADFGLARL+ + + R + APE T K
Sbjct: 138 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 197
Query: 695 DVYSFGVVALEVL 707
DV+SFG++ E++
Sbjct: 198 DVWSFGILLTEIV 210
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 98/206 (47%), Gaps = 22/206 (10%)
Query: 509 DFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRN 568
D +K+ +G G YG VY L K + +T E +E F EA ++ +I+H N
Sbjct: 12 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKHPN 68
Query: 569 IVKLYGFCLHNKCMFLIYEYMERGSLFCVL----RNDVEAVELDWTKRVNIVKSMAHALS 624
+V+L G C ++I E+M G+L L R +V AV L + + ++ A+
Sbjct: 69 LVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISSAME 123
Query: 625 YLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGT---YGYIA 681
YL K + +HRD VADFGL+RL+ D+ T G + A
Sbjct: 124 YLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX--TAHAGAKFPIKWTA 178
Query: 682 PE-LAYTMAVTEKCDVYSFGVVALEV 706
PE LAY + K DV++FGV+ E+
Sbjct: 179 PESLAYN-KFSIKSDVWAFGVLLWEI 203
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 95/193 (49%), Gaps = 10/193 (5%)
Query: 516 IGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGF 575
+G G +G V+ + VA+K L + AFL EA L+ Q++H+ +V+LY
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFL----AEANLMKQLQHQRLVRLYA- 80
Query: 576 CLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIV 635
+ + +++I EYME GSL L+ ++L K +++ +A ++++ + + +
Sbjct: 81 VVTQEPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIE---ERNYI 136
Query: 636 HRDXXXXXXXXXXXXEAFVADFGLARLLHPDS-SNRTLVVGTYGYIAPELAYTMAVTEKC 694
HRD +ADFGLARL+ + + R + APE T K
Sbjct: 137 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 196
Query: 695 DVYSFGVVALEVL 707
DV+SFG++ E++
Sbjct: 197 DVWSFGILLTEIV 209
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 95/193 (49%), Gaps = 10/193 (5%)
Query: 516 IGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGF 575
+G G +G V+ + VA+K L + AFL EA L+ Q++H+ +V+LY
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFL----AEANLMKQLQHQRLVRLYA- 76
Query: 576 CLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIV 635
+ + +++I EYME GSL L+ ++L K +++ +A ++++ + + +
Sbjct: 77 VVTQEPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIE---ERNYI 132
Query: 636 HRDXXXXXXXXXXXXEAFVADFGLARLLHP-DSSNRTLVVGTYGYIAPELAYTMAVTEKC 694
HRD +ADFGLARL+ + + R + APE T K
Sbjct: 133 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 192
Query: 695 DVYSFGVVALEVL 707
DV+SFG++ E++
Sbjct: 193 DVWSFGILLTEIV 205
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 98/206 (47%), Gaps = 22/206 (10%)
Query: 509 DFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRN 568
D +K+ +G G YG VY L K + +T E +E F EA ++ +I+H N
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKHPN 75
Query: 569 IVKLYGFCLHNKCMFLIYEYMERGSLFCVL----RNDVEAVELDWTKRVNIVKSMAHALS 624
+V+L G C ++I E+M G+L L R +V AV L + + ++ A+
Sbjct: 76 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAME 130
Query: 625 YLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGT---YGYIA 681
YL K + +HRD VADFGL+RL+ D+ T G + A
Sbjct: 131 YLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX--TAHAGAKFPIKWTA 185
Query: 682 PE-LAYTMAVTEKCDVYSFGVVALEV 706
PE LAY + K DV++FGV+ E+
Sbjct: 186 PESLAYN-KFSIKSDVWAFGVLLWEI 210
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 95/193 (49%), Gaps = 10/193 (5%)
Query: 516 IGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGF 575
+G G +G V+ + VA+K L + AFL EA L+ Q++H+ +V+LY
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFL----AEANLMKQLQHQRLVRLYA- 75
Query: 576 CLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIV 635
+ + +++I EYME GSL L+ ++L K +++ +A ++++ + + +
Sbjct: 76 VVTQEPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIE---ERNYI 131
Query: 636 HRDXXXXXXXXXXXXEAFVADFGLARLLHP-DSSNRTLVVGTYGYIAPELAYTMAVTEKC 694
HRD +ADFGLARL+ + + R + APE T K
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 695 DVYSFGVVALEVL 707
DV+SFG++ E++
Sbjct: 192 DVWSFGILLTEIV 204
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 95/193 (49%), Gaps = 10/193 (5%)
Query: 516 IGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGF 575
+G G +G V+ + VA+K L + AFL EA L+ Q++H+ +V+LY
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFL----AEANLMKQLQHQRLVRLYA- 85
Query: 576 CLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIV 635
+ + +++I EYME GSL L+ ++L K +++ +A ++++ + + +
Sbjct: 86 VVTQEPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIE---ERNYI 141
Query: 636 HRDXXXXXXXXXXXXEAFVADFGLARLLHPDS-SNRTLVVGTYGYIAPELAYTMAVTEKC 694
HRD +ADFGLARL+ + + R + APE T K
Sbjct: 142 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 201
Query: 695 DVYSFGVVALEVL 707
DV+SFG++ E++
Sbjct: 202 DVWSFGILLTEIV 214
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 98/206 (47%), Gaps = 22/206 (10%)
Query: 509 DFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRN 568
D +K+ +G G YG VY L K + +T E +E F EA ++ +I+H N
Sbjct: 15 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKHPN 71
Query: 569 IVKLYGFCLHNKCMFLIYEYMERGSLFCVL----RNDVEAVELDWTKRVNIVKSMAHALS 624
+V+L G C ++I E+M G+L L R +V AV L + + ++ A+
Sbjct: 72 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAME 126
Query: 625 YLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGT---YGYIA 681
YL K + +HRD VADFGL+RL+ D+ T G + A
Sbjct: 127 YLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAPAGAKFPIKWTA 181
Query: 682 PE-LAYTMAVTEKCDVYSFGVVALEV 706
PE LAY + K DV++FGV+ E+
Sbjct: 182 PESLAYN-KFSIKSDVWAFGVLLWEI 206
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 98/206 (47%), Gaps = 22/206 (10%)
Query: 509 DFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRN 568
D +K+ +G G YG VY L K + +T E +E F EA ++ +I+H N
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKHPN 75
Query: 569 IVKLYGFCLHNKCMFLIYEYMERGSLFCVL----RNDVEAVELDWTKRVNIVKSMAHALS 624
+V+L G C ++I E+M G+L L R +V AV L + + ++ A+
Sbjct: 76 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISSAME 130
Query: 625 YLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGT---YGYIA 681
YL K + +HRD VADFGL+RL+ D+ T G + A
Sbjct: 131 YLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTA 185
Query: 682 PE-LAYTMAVTEKCDVYSFGVVALEV 706
PE LAY + K DV++FGV+ E+
Sbjct: 186 PESLAYN-KFSIKSDVWAFGVLLWEI 210
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 98/206 (47%), Gaps = 22/206 (10%)
Query: 509 DFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRN 568
D +K+ +G G YG VY L K + +T E +E F EA ++ +I+H N
Sbjct: 16 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKHPN 72
Query: 569 IVKLYGFCLHNKCMFLIYEYMERGSLFCVL----RNDVEAVELDWTKRVNIVKSMAHALS 624
+V+L G C ++I E+M G+L L R +V AV L + + ++ A+
Sbjct: 73 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAME 127
Query: 625 YLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGT---YGYIA 681
YL K + +HRD VADFGL+RL+ D+ T G + A
Sbjct: 128 YLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAPAGAKFPIKWTA 182
Query: 682 PE-LAYTMAVTEKCDVYSFGVVALEV 706
PE LAY + K DV++FGV+ E+
Sbjct: 183 PESLAYN-KFSIKSDVWAFGVLLWEI 207
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 98/206 (47%), Gaps = 22/206 (10%)
Query: 509 DFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRN 568
D +K+ +G G YG VY L K + +T E +E F EA ++ +I+H N
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKHPN 75
Query: 569 IVKLYGFCLHNKCMFLIYEYMERGSLFCVL----RNDVEAVELDWTKRVNIVKSMAHALS 624
+V+L G C ++I E+M G+L L R +V AV L + + ++ A+
Sbjct: 76 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAME 130
Query: 625 YLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGT---YGYIA 681
YL K + +HRD VADFGL+RL+ D+ T G + A
Sbjct: 131 YLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTA 185
Query: 682 PE-LAYTMAVTEKCDVYSFGVVALEV 706
PE LAY + K DV++FGV+ E+
Sbjct: 186 PESLAYN-KFSIKSDVWAFGVLLWEI 210
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 95/193 (49%), Gaps = 10/193 (5%)
Query: 516 IGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGF 575
+G G +G V+ + VA+K L + AFL EA L+ Q++H+ +V+LY
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFL----AEANLMKQLQHQRLVRLYA- 70
Query: 576 CLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIV 635
+ + +++I EYME GSL L+ ++L K +++ +A ++++ + + +
Sbjct: 71 VVTQEPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIE---ERNYI 126
Query: 636 HRDXXXXXXXXXXXXEAFVADFGLARLLHPDS-SNRTLVVGTYGYIAPELAYTMAVTEKC 694
HRD +ADFGLARL+ + + R + APE T K
Sbjct: 127 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 186
Query: 695 DVYSFGVVALEVL 707
DV+SFG++ E++
Sbjct: 187 DVWSFGILLTEIV 199
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 98/206 (47%), Gaps = 22/206 (10%)
Query: 509 DFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRN 568
D +K+ +G G YG VY L K + +T E +E F EA ++ +I+H N
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKHPN 70
Query: 569 IVKLYGFCLHNKCMFLIYEYMERGSLFCVL----RNDVEAVELDWTKRVNIVKSMAHALS 624
+V+L G C ++I E+M G+L L R +V AV L + + ++ A+
Sbjct: 71 LVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISSAME 125
Query: 625 YLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGT---YGYIA 681
YL K + +HRD VADFGL+RL+ D+ T G + A
Sbjct: 126 YLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTA 180
Query: 682 PE-LAYTMAVTEKCDVYSFGVVALEV 706
PE LAY + K DV++FGV+ E+
Sbjct: 181 PESLAYN-KFSIKSDVWAFGVLLWEI 205
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 104/212 (49%), Gaps = 30/212 (14%)
Query: 515 CIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
C+G G YG V+R G+ VA+K + S E+ F E TE +RH NI+
Sbjct: 44 CVGKGRYGEVWRGSWQ-GENVAVK-IFSSRDEKSWFRE---TELYNTVMLRHENILGFIA 98
Query: 575 FCLHNK----CMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDC 630
+ ++ ++LI Y E GSL+ L + LD + IV S+A L++LH +
Sbjct: 99 SDMTSRHSSTQLWLITHYHEMGSLYDYL----QLTTLDTVSCLRIVLSIASGLAHLHIEI 154
Query: 631 -----KPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLV-----VGTYGYI 680
KP+I HRD + +AD GLA ++H S+N+ V VGT Y+
Sbjct: 155 FGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA-VMHSQSTNQLDVGNNPRVGTKRYM 213
Query: 681 APE-LAYTMAVT-----EKCDVYSFGVVALEV 706
APE L T+ V ++ D+++FG+V EV
Sbjct: 214 APEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 95/193 (49%), Gaps = 10/193 (5%)
Query: 516 IGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGF 575
+G G +G V+ + VA+K L + AFL EA L+ Q++H+ +V+LY
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFL----AEANLMKQLQHQRLVRLYA- 75
Query: 576 CLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIV 635
+ + +++I EYME GSL L+ ++L K +++ +A ++++ + + +
Sbjct: 76 VVTQEPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIE---ERNYI 131
Query: 636 HRDXXXXXXXXXXXXEAFVADFGLARLLHPDS-SNRTLVVGTYGYIAPELAYTMAVTEKC 694
HRD +ADFGLARL+ + + R + APE T K
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 695 DVYSFGVVALEVL 707
DV+SFG++ E++
Sbjct: 192 DVWSFGILLTEIV 204
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 106/221 (47%), Gaps = 30/221 (13%)
Query: 506 ATEDFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIR 565
D + C+G G YG V+R G+ VA+K + S E+ F E TE +R
Sbjct: 6 VARDITLLECVGKGRYGEVWRGSWQ-GENVAVK-IFSSRDEKSWFRE---TELYNTVMLR 60
Query: 566 HRNIVKLYGFCLHNK----CMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAH 621
H NI+ + ++ ++LI Y E GSL+ L + LD + IV S+A
Sbjct: 61 HENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL----QLTTLDTVSCLRIVLSIAS 116
Query: 622 ALSYLHYDC-----KPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLV--- 673
L++LH + KP+I HRD + +AD GLA ++H S+N+ V
Sbjct: 117 GLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA-VMHSQSTNQLDVGNN 175
Query: 674 --VGTYGYIAPE-LAYTMAVT-----EKCDVYSFGVVALEV 706
VGT Y+APE L T+ V ++ D+++FG+V EV
Sbjct: 176 PRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 98/206 (47%), Gaps = 22/206 (10%)
Query: 509 DFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRN 568
D +K+ +G G YG VY L K + +T E +E F EA ++ +I+H N
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKHPN 70
Query: 569 IVKLYGFCLHNKCMFLIYEYMERGSLFCVL----RNDVEAVELDWTKRVNIVKSMAHALS 624
+V+L G C ++I E+M G+L L R +V AV L + + ++ A+
Sbjct: 71 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISSAME 125
Query: 625 YLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGT---YGYIA 681
YL K + +HRD VADFGL+RL+ D+ T G + A
Sbjct: 126 YLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY--TAHAGAKFPIKWTA 180
Query: 682 PE-LAYTMAVTEKCDVYSFGVVALEV 706
PE LAY + K DV++FGV+ E+
Sbjct: 181 PESLAYN-KFSIKSDVWAFGVLLWEI 205
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 98/206 (47%), Gaps = 22/206 (10%)
Query: 509 DFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRN 568
D +K+ +G G YG VY L K + +T E +E F EA ++ +I+H N
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKHPN 75
Query: 569 IVKLYGFCLHNKCMFLIYEYMERGSLFCVL----RNDVEAVELDWTKRVNIVKSMAHALS 624
+V+L G C ++I E+M G+L L R +V AV L + + ++ A+
Sbjct: 76 LVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAME 130
Query: 625 YLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGT---YGYIA 681
YL K + +HRD VADFGL+RL+ D+ T G + A
Sbjct: 131 YLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTA 185
Query: 682 PE-LAYTMAVTEKCDVYSFGVVALEV 706
PE LAY + K DV++FGV+ E+
Sbjct: 186 PESLAYN-KFSIKSDVWAFGVLLWEI 210
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 98/206 (47%), Gaps = 22/206 (10%)
Query: 509 DFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRN 568
D +K+ +G G YG VY L K + +T E +E F EA ++ +I+H N
Sbjct: 18 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKHPN 74
Query: 569 IVKLYGFCLHNKCMFLIYEYMERGSLFCVL----RNDVEAVELDWTKRVNIVKSMAHALS 624
+V+L G C ++I E+M G+L L R +V AV L + + ++ A+
Sbjct: 75 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAME 129
Query: 625 YLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGT---YGYIA 681
YL K + +HRD VADFGL+RL+ D+ T G + A
Sbjct: 130 YLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTA 184
Query: 682 PE-LAYTMAVTEKCDVYSFGVVALEV 706
PE LAY + K DV++FGV+ E+
Sbjct: 185 PESLAYN-KFSIKSDVWAFGVLLWEI 209
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 96/222 (43%), Gaps = 16/222 (7%)
Query: 499 TFEEMIEATEDFHIKYCIGTGGYGSVYRAQLS-SGKL---VALKKLHRSETEEPAFLESF 554
+F IEA+ HI+ IG+G G V +L G+ VA+K L TE F
Sbjct: 41 SFTREIEASR-IHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQR--RDF 97
Query: 555 QTEARLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVN 614
+EA ++ Q H NI++L G + ++ EYME GSL LR + + V
Sbjct: 98 LSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRT--HDGQFTIMQLVG 155
Query: 615 IVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVV 674
+++ + + YL VHRD V+DFGL+R+L D
Sbjct: 156 MLRGVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTT 212
Query: 675 G---TYGYIAPELAYTMAVTEKCDVYSFGVVALEVLM-GSHP 712
G + APE + DV+SFGVV EVL G P
Sbjct: 213 GGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERP 254
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 98/206 (47%), Gaps = 22/206 (10%)
Query: 509 DFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRN 568
D +K+ +G G YG VY L K + +T E +E F EA ++ +I+H N
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKHPN 70
Query: 569 IVKLYGFCLHNKCMFLIYEYMERGSLFCVL----RNDVEAVELDWTKRVNIVKSMAHALS 624
+V+L G C ++I E+M G+L L R +V AV L + + ++ A+
Sbjct: 71 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISSAME 125
Query: 625 YLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGT---YGYIA 681
YL K + +HRD VADFGL+RL+ D+ T G + A
Sbjct: 126 YLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTA 180
Query: 682 PE-LAYTMAVTEKCDVYSFGVVALEV 706
PE LAY + K DV++FGV+ E+
Sbjct: 181 PESLAYN-KFSIKSDVWAFGVLLWEI 205
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 98/206 (47%), Gaps = 22/206 (10%)
Query: 509 DFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRN 568
D +K+ +G G YG VY L K + +T E +E F EA ++ +I+H N
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKHPN 75
Query: 569 IVKLYGFCLHNKCMFLIYEYMERGSLFCVL----RNDVEAVELDWTKRVNIVKSMAHALS 624
+V+L G C ++I E+M G+L L R +V AV L + + ++ A+
Sbjct: 76 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAME 130
Query: 625 YLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGT---YGYIA 681
YL K + +HRD VADFGL+RL+ D+ T G + A
Sbjct: 131 YLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTA 185
Query: 682 PE-LAYTMAVTEKCDVYSFGVVALEV 706
PE LAY + K DV++FGV+ E+
Sbjct: 186 PESLAYN-KFSIKSDVWAFGVLLWEI 210
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 97/204 (47%), Gaps = 18/204 (8%)
Query: 509 DFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRN 568
D +K+ +G G YG VY L K + +T E +E F EA ++ +I+H N
Sbjct: 12 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKHPN 68
Query: 569 IVKLYGFCLHNKCMFLIYEYMERGSLFCVL----RNDVEAVELDWTKRVNIVKSMAHALS 624
+V+L G C ++I E+M G+L L R +V AV L + + ++ A+
Sbjct: 69 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISSAME 123
Query: 625 YLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDS-SNRTLVVGTYGYIAPE 683
YL K + +HRD VADFGL+RL+ D+ + + APE
Sbjct: 124 YLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPE 180
Query: 684 -LAYTMAVTEKCDVYSFGVVALEV 706
LAY + K DV++FGV+ E+
Sbjct: 181 SLAYN-KFSIKSDVWAFGVLLWEI 203
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 98/200 (49%), Gaps = 10/200 (5%)
Query: 508 EDFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHR 567
E ++ +G G +G V+ + VA+K L AFL+ EA+++ +IRH
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQ----EAQVMKKIRHE 73
Query: 568 NIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLH 627
+V+LY + + ++++ EYM +GSL L+ ++ L + V++ +A ++Y+
Sbjct: 74 KLVQLYAV-VSEEPIYIVTEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVE 131
Query: 628 YDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDS-SNRTLVVGTYGYIAPELAY 686
+ + VHRD VADFGLARL+ + + R + APE A
Sbjct: 132 ---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAAL 188
Query: 687 TMAVTEKCDVYSFGVVALEV 706
T K DV+SFG++ E+
Sbjct: 189 YGRFTIKSDVWSFGILLTEL 208
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 98/206 (47%), Gaps = 22/206 (10%)
Query: 509 DFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRN 568
D +K+ +G G YG VY L K + +T E +E F EA ++ +I+H N
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKHPN 70
Query: 569 IVKLYGFCLHNKCMFLIYEYMERGSLFCVL----RNDVEAVELDWTKRVNIVKSMAHALS 624
+V+L G C ++I E+M G+L L R +V AV L + + ++ A+
Sbjct: 71 LVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISSAME 125
Query: 625 YLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGT---YGYIA 681
YL K + +HRD VADFGL+RL+ D+ T G + A
Sbjct: 126 YLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTA 180
Query: 682 PE-LAYTMAVTEKCDVYSFGVVALEV 706
PE LAY + K DV++FGV+ E+
Sbjct: 181 PESLAYN-KFSIKSDVWAFGVLLWEI 205
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 98/206 (47%), Gaps = 22/206 (10%)
Query: 509 DFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRN 568
D +K+ +G G YG VY L K + +T E +E F EA ++ +I+H N
Sbjct: 16 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKHPN 72
Query: 569 IVKLYGFCLHNKCMFLIYEYMERGSLFCVL----RNDVEAVELDWTKRVNIVKSMAHALS 624
+V+L G C ++I E+M G+L L R +V AV L + + ++ A+
Sbjct: 73 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAME 127
Query: 625 YLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGT---YGYIA 681
YL K + +HRD VADFGL+RL+ D+ T G + A
Sbjct: 128 YLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTA 182
Query: 682 PE-LAYTMAVTEKCDVYSFGVVALEV 706
PE LAY + K DV++FGV+ E+
Sbjct: 183 PESLAYN-KFSIKSDVWAFGVLLWEI 207
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 98/206 (47%), Gaps = 22/206 (10%)
Query: 509 DFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRN 568
D +K+ +G G YG VY L K + +T E +E F EA ++ +I+H N
Sbjct: 16 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKHPN 72
Query: 569 IVKLYGFCLHNKCMFLIYEYMERGSLFCVL----RNDVEAVELDWTKRVNIVKSMAHALS 624
+V+L G C ++I E+M G+L L R +V AV L + + ++ A+
Sbjct: 73 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAME 127
Query: 625 YLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGT---YGYIA 681
YL K + +HRD VADFGL+RL+ D+ T G + A
Sbjct: 128 YLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTA 182
Query: 682 PE-LAYTMAVTEKCDVYSFGVVALEV 706
PE LAY + K DV++FGV+ E+
Sbjct: 183 PESLAYN-KFSIKSDVWAFGVLLWEI 207
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 98/206 (47%), Gaps = 22/206 (10%)
Query: 509 DFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRN 568
D +K+ +G G YG VY L K + +T E +E F EA ++ +I+H N
Sbjct: 27 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKHPN 83
Query: 569 IVKLYGFCLHNKCMFLIYEYMERGSLFCVL----RNDVEAVELDWTKRVNIVKSMAHALS 624
+V+L G C ++I E+M G+L L R +V AV L + + ++ A+
Sbjct: 84 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAME 138
Query: 625 YLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGT---YGYIA 681
YL K + +HRD VADFGL+RL+ D+ T G + A
Sbjct: 139 YLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTA 193
Query: 682 PE-LAYTMAVTEKCDVYSFGVVALEV 706
PE LAY + K DV++FGV+ E+
Sbjct: 194 PESLAYN-KFSIKSDVWAFGVLLWEI 218
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 104/212 (49%), Gaps = 30/212 (14%)
Query: 515 CIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
C+G G YG V+R G+ VA+K + S E+ F E TE +RH NI+
Sbjct: 15 CVGKGRYGEVWRGSWQ-GENVAVK-IFSSRDEKSWFRE---TELYNTVMLRHENILGFIA 69
Query: 575 FCLHNK----CMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDC 630
+ ++ ++LI Y E GSL+ L + LD + IV S+A L++LH +
Sbjct: 70 SDMTSRHSSTQLWLITHYHEMGSLYDYL----QLTTLDTVSCLRIVLSIASGLAHLHIEI 125
Query: 631 -----KPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLV-----VGTYGYI 680
KP+I HRD + +AD GLA ++H S+N+ V VGT Y+
Sbjct: 126 FGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA-VMHSQSTNQLDVGNNPRVGTKRYM 184
Query: 681 APE-LAYTMAVT-----EKCDVYSFGVVALEV 706
APE L T+ V ++ D+++FG+V EV
Sbjct: 185 APEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 96/212 (45%), Gaps = 19/212 (8%)
Query: 512 IKYCIGTGGYGSVYRAQLS-SGK---LVALKKLHRSETEEPAFLESFQTEARLLSQIRHR 567
I+ IG G +G V L GK VA+K L TE+ F +EA ++ Q H
Sbjct: 11 IEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQR--RDFLSEASIMGQFDHP 68
Query: 568 NIVKLYGFCLHNKCMFLIYEYMERGSLFCVLR-NDVEAVELDWTKRVNIVKSMAHALSYL 626
N++ L G + + +I E+ME GSL LR ND + + + V +++ +A + YL
Sbjct: 69 NVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVI---QLVGMLRGIAAGMKYL 125
Query: 627 HYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYG-----YIA 681
+ VHR V+DFGL+R L D+S+ T G + A
Sbjct: 126 ---ADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTA 182
Query: 682 PELAYTMAVTEKCDVYSFGVVALEVL-MGSHP 712
PE T DV+S+G+V EV+ G P
Sbjct: 183 PEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 214
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 98/206 (47%), Gaps = 22/206 (10%)
Query: 509 DFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRN 568
D +K+ +G G YG VY L K + +T E +E F EA ++ +I+H N
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKHPN 70
Query: 569 IVKLYGFCLHNKCMFLIYEYMERGSLFCVL----RNDVEAVELDWTKRVNIVKSMAHALS 624
+V+L G C ++I E+M G+L L R +V AV L + + ++ A+
Sbjct: 71 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAME 125
Query: 625 YLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGT---YGYIA 681
YL K + +HRD VADFGL+RL+ D+ T G + A
Sbjct: 126 YLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY--TAHAGAKFPIKWTA 180
Query: 682 PE-LAYTMAVTEKCDVYSFGVVALEV 706
PE LAY + K DV++FGV+ E+
Sbjct: 181 PESLAYN-KFSIKSDVWAFGVLLWEI 205
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 98/206 (47%), Gaps = 22/206 (10%)
Query: 509 DFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRN 568
D +K+ +G G YG VY L K + +T E +E F EA ++ +I+H N
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKHPN 70
Query: 569 IVKLYGFCLHNKCMFLIYEYMERGSLFCVL----RNDVEAVELDWTKRVNIVKSMAHALS 624
+V+L G C ++I E+M G+L L R +V AV L + + ++ A+
Sbjct: 71 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAME 125
Query: 625 YLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGT---YGYIA 681
YL K + +HRD VADFGL+RL+ D+ T G + A
Sbjct: 126 YLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY--TAHAGAKFPIKWTA 180
Query: 682 PE-LAYTMAVTEKCDVYSFGVVALEV 706
PE LAY + K DV++FGV+ E+
Sbjct: 181 PESLAYN-KFSIKSDVWAFGVLLWEI 205
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 99/221 (44%), Gaps = 16/221 (7%)
Query: 500 FEEMIEATEDFHIKYCIGTGGYGSVY--RAQLSSGK--LVALKKLHRSETEEPAFLESFQ 555
F + ++AT + I +G G +G V R +L S K VA+K L TE+ F
Sbjct: 38 FAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFL 94
Query: 556 TEARLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNI 615
EA ++ Q H NI++L G +K + ++ EYME GSL LR + + V +
Sbjct: 95 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK--HDAQFTVIQLVGM 152
Query: 616 VKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVG 675
++ +A + YL VHRD V+DFGLAR+L D G
Sbjct: 153 LRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRG 209
Query: 676 ---TYGYIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHP 712
+ +PE T DV+S+G+V EV+ G P
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 98/200 (49%), Gaps = 10/200 (5%)
Query: 508 EDFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHR 567
E ++ +G G +G V+ + VA+K L AFL+ EA+++ ++RH
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQ----EAQVMKKLRHE 73
Query: 568 NIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLH 627
+V+LY + + ++++ EYM +GSL L+ ++ L + V++ +A ++Y+
Sbjct: 74 KLVQLYAV-VSEEPIYIVIEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVE 131
Query: 628 YDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHP-DSSNRTLVVGTYGYIAPELAY 686
+ + VHRD VADFGLARL+ + + R + APE A
Sbjct: 132 ---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAAL 188
Query: 687 TMAVTEKCDVYSFGVVALEV 706
T K DV+SFG++ E+
Sbjct: 189 YGRFTIKSDVWSFGILLTEL 208
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 97/198 (48%), Gaps = 11/198 (5%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
IG G G+VY A +++G+ VA+++++ + + E E ++ + ++ NIV
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK---ELIINEILVMRENKNPNIVNYLD 84
Query: 575 FCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSI 634
L ++++ EY+ GSL V+ +D + + + AL +LH + +
Sbjct: 85 SYLVGDELWVVMEYLAGGSLTDVVTETC----MDEGQIAAVCRECLQALEFLHSN---QV 137
Query: 635 VHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYTMAVTEKC 694
+HRD + DFG + P+ S R+ +VGT ++APE+ A K
Sbjct: 138 IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKV 197
Query: 695 DVYSFGVVALEVLMGSHP 712
D++S G++A+E++ G P
Sbjct: 198 DIWSLGIMAIEMIEGEPP 215
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 98/211 (46%), Gaps = 16/211 (7%)
Query: 508 EDFHIKYCIGTGGYGSVYRAQLSSGKL-VALKKLHRSETEEPAFLESFQTEARLLSQIRH 566
E + I +G GG +VY A+ + + VA+K + E+ L+ F+ E SQ+ H
Sbjct: 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSH 70
Query: 567 RNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVE----LDWTKRVNIVKSMAHA 622
+NIV + + C +L+ EY+E +L E +E L +N +
Sbjct: 71 QNIVSMIDVDEEDDCYYLVMEYIEGPTLS-------EYIESHGPLSVDTAINFTNQILDG 123
Query: 623 LSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRT-LVVGTYGYIA 681
+ + H D + IVHRD + DFG+A+ L S +T V+GT Y +
Sbjct: 124 IKHAH-DMR--IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFS 180
Query: 682 PELAYTMAVTEKCDVYSFGVVALEVLMGSHP 712
PE A A E D+YS G+V E+L+G P
Sbjct: 181 PEQAKGEATDECTDIYSIGIVLYEMLVGEPP 211
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 96/222 (43%), Gaps = 16/222 (7%)
Query: 499 TFEEMIEATEDFHIKYCIGTGGYGSVYRAQLS-SGKL---VALKKLHRSETEEPAFLESF 554
+F IEA+ HI+ IG+G G V +L G+ VA+K L TE F
Sbjct: 41 SFTREIEASR-IHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQR--RDF 97
Query: 555 QTEARLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVN 614
+EA ++ Q H NI++L G + ++ EYME GSL LR + + V
Sbjct: 98 LSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRT--HDGQFTIMQLVG 155
Query: 615 IVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVV 674
+++ + + YL VHRD V+DFGL+R+L D
Sbjct: 156 MLRGVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTT 212
Query: 675 G---TYGYIAPELAYTMAVTEKCDVYSFGVVALEVLM-GSHP 712
G + APE + DV+SFGVV EVL G P
Sbjct: 213 GGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERP 254
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 97/198 (48%), Gaps = 11/198 (5%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
IG G G+VY A +++G+ VA+++++ + + E E ++ + ++ NIV
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK---ELIINEILVMRENKNPNIVNYLD 84
Query: 575 FCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSI 634
L ++++ EY+ GSL V+ +D + + + AL +LH + +
Sbjct: 85 SYLVGDELWVVMEYLAGGSLTDVVTETC----MDEGQIAAVCRECLQALEFLHSN---QV 137
Query: 635 VHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYTMAVTEKC 694
+HRD + DFG + P+ S R+ +VGT ++APE+ A K
Sbjct: 138 IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKV 197
Query: 695 DVYSFGVVALEVLMGSHP 712
D++S G++A+E++ G P
Sbjct: 198 DIWSLGIMAIEMIEGEPP 215
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 97/193 (50%), Gaps = 10/193 (5%)
Query: 516 IGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGF 575
+G G +G V+ + VA+K L + T P ESF EA+++ +++H +V+LY
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTL-KPGTMSP---ESFLEEAQIMKKLKHDKLVQLYA- 71
Query: 576 CLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIV 635
+ + ++++ EYM +GSL L+ D E L V++ +A ++Y+ + + +
Sbjct: 72 VVSEEPIYIVTEYMNKGSLLDFLK-DGEGRALKLPNLVDMAAQVAAGMAYIE---RMNYI 127
Query: 636 HRDXXXXXXXXXXXXEAFVADFGLARLLHP-DSSNRTLVVGTYGYIAPELAYTMAVTEKC 694
HRD +ADFGLARL+ + + R + APE A T K
Sbjct: 128 HRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKS 187
Query: 695 DVYSFGVVALEVL 707
DV+SFG++ E++
Sbjct: 188 DVWSFGILLTELV 200
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 98/206 (47%), Gaps = 22/206 (10%)
Query: 509 DFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRN 568
D +K+ +G G +G VY L K + +T E +E F EA ++ +I+H N
Sbjct: 12 DITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKHPN 68
Query: 569 IVKLYGFCLHNKCMFLIYEYMERGSLFCVL----RNDVEAVELDWTKRVNIVKSMAHALS 624
+V+L G C ++I E+M G+L L R +V AV L + + ++ A+
Sbjct: 69 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISSAME 123
Query: 625 YLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGT---YGYIA 681
YL K + +HRD VADFGL+RL+ D+ T G + A
Sbjct: 124 YLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX--TAHAGAKFPIKWTA 178
Query: 682 PE-LAYTMAVTEKCDVYSFGVVALEV 706
PE LAY + K DV++FGV+ E+
Sbjct: 179 PESLAYN-KFSIKSDVWAFGVLLWEI 203
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 97/200 (48%), Gaps = 10/200 (5%)
Query: 508 EDFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHR 567
E ++ +G G +G V+ + VA+K L AFL+ EA+++ ++RH
Sbjct: 267 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQ----EAQVMKKLRHE 322
Query: 568 NIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLH 627
+V+LY + + ++++ EYM +GSL L+ + L + V++ +A ++Y+
Sbjct: 323 KLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYVE 380
Query: 628 YDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDS-SNRTLVVGTYGYIAPELAY 686
+ + VHRD VADFGLARL+ + + R + APE A
Sbjct: 381 ---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAAL 437
Query: 687 TMAVTEKCDVYSFGVVALEV 706
T K DV+SFG++ E+
Sbjct: 438 YGRFTIKSDVWSFGILLTEL 457
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 101/213 (47%), Gaps = 24/213 (11%)
Query: 508 EDFHIKYCIGTGGYGSVY--RAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIR 565
+DF I +GTG +G V+ R++ +G+ A+K L + +E E +LS +
Sbjct: 6 QDFQILRTLGTGSFGRVHLIRSR-HNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVT 64
Query: 566 HRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRV--NIVKSMAH-- 621
H I++++G + +F+I +Y+E G LF +LR ++R + K A
Sbjct: 65 HPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRK---------SQRFPNPVAKFYAAEV 115
Query: 622 --ALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGY 679
AL YLH I++RD + DFG A+ + PD + + GT Y
Sbjct: 116 CLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYV-PDVT--YXLCGTPDY 169
Query: 680 IAPELAYTMAVTEKCDVYSFGVVALEVLMGSHP 712
IAPE+ T + D +SFG++ E+L G P
Sbjct: 170 IAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTP 202
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 98/206 (47%), Gaps = 22/206 (10%)
Query: 509 DFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRN 568
D +K+ +G G YG VY L K + +T E +E F EA ++ +I+H N
Sbjct: 221 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKHPN 277
Query: 569 IVKLYGFCLHNKCMFLIYEYMERGSLFCVL----RNDVEAVELDWTKRVNIVKSMAHALS 624
+V+L G C ++I E+M G+L L R +V AV L + + ++ A+
Sbjct: 278 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISSAME 332
Query: 625 YLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGT---YGYIA 681
YL K + +HR+ VADFGL+RL+ D+ T G + A
Sbjct: 333 YLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTA 387
Query: 682 PE-LAYTMAVTEKCDVYSFGVVALEV 706
PE LAY + K DV++FGV+ E+
Sbjct: 388 PESLAYN-KFSIKSDVWAFGVLLWEI 412
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 97/198 (48%), Gaps = 11/198 (5%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
IG G G+VY A +++G+ VA+++++ + + E E ++ + ++ NIV
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK---ELIINEILVMRENKNPNIVNYLD 85
Query: 575 FCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSI 634
L ++++ EY+ GSL V+ +D + + + AL +LH + +
Sbjct: 86 SYLVGDELWVVMEYLAGGSLTDVVTETC----MDEGQIAAVCRECLQALEFLHSN---QV 138
Query: 635 VHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYTMAVTEKC 694
+HRD + DFG + P+ S R+ +VGT ++APE+ A K
Sbjct: 139 IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKV 198
Query: 695 DVYSFGVVALEVLMGSHP 712
D++S G++A+E++ G P
Sbjct: 199 DIWSLGIMAIEMIEGEPP 216
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 98/200 (49%), Gaps = 10/200 (5%)
Query: 508 EDFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHR 567
E ++ +G G +G V+ + VA+K L AFL+ EA+++ ++RH
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQ----EAQVMKKLRHE 73
Query: 568 NIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLH 627
+V+LY + + ++++ EYM +GSL L+ ++ L + V++ +A ++Y+
Sbjct: 74 KLVQLYAV-VSEEPIYIVTEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVE 131
Query: 628 YDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDS-SNRTLVVGTYGYIAPELAY 686
+ + VHRD VADFGLARL+ + + R + APE A
Sbjct: 132 ---RMNYVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAAL 188
Query: 687 TMAVTEKCDVYSFGVVALEV 706
T K DV+SFG++ E+
Sbjct: 189 YGRFTIKSDVWSFGILLTEL 208
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 98/206 (47%), Gaps = 12/206 (5%)
Query: 508 EDFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHR 567
E +H IG G YG VY+AQ + G+ ALKK+ R E E+ + E +L +++H
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKI-RLEKEDEGIPSTTIREISILKELKHS 60
Query: 568 NIVKLYGFCLHNKCMFLIYEYMERG--SLFCVLRNDVEAVELDWTKRVNIVKSMAHALSY 625
NIVKLY K + L++E++++ L V +E+V + + + + ++Y
Sbjct: 61 NIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAK-----SFLLQLLNGIAY 115
Query: 626 LHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPE-L 684
H ++HRD E +ADFGLAR T V T Y AP+ L
Sbjct: 116 CH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVL 172
Query: 685 AYTMAVTEKCDVYSFGVVALEVLMGS 710
+ + D++S G + E++ G+
Sbjct: 173 MGSKKYSTTIDIWSVGCIFAEMVNGA 198
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 98/206 (47%), Gaps = 22/206 (10%)
Query: 509 DFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRN 568
D +K+ +G G YG VY L K + +T E +E F EA ++ +I+H N
Sbjct: 218 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKHPN 274
Query: 569 IVKLYGFCLHNKCMFLIYEYMERGSLFCVL----RNDVEAVELDWTKRVNIVKSMAHALS 624
+V+L G C ++I E+M G+L L R +V AV L + + ++ A+
Sbjct: 275 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAME 329
Query: 625 YLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGT---YGYIA 681
YL K + +HR+ VADFGL+RL+ D+ T G + A
Sbjct: 330 YLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTA 384
Query: 682 PE-LAYTMAVTEKCDVYSFGVVALEV 706
PE LAY + K DV++FGV+ E+
Sbjct: 385 PESLAYN-KFSIKSDVWAFGVLLWEI 409
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 98/206 (47%), Gaps = 12/206 (5%)
Query: 508 EDFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHR 567
E +H IG G YG VY+AQ + G+ ALKK+ R E E+ + E +L +++H
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKI-RLEKEDEGIPSTTIREISILKELKHS 60
Query: 568 NIVKLYGFCLHNKCMFLIYEYMERG--SLFCVLRNDVEAVELDWTKRVNIVKSMAHALSY 625
NIVKLY K + L++E++++ L V +E+V + + + + ++Y
Sbjct: 61 NIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAK-----SFLLQLLNGIAY 115
Query: 626 LHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPE-L 684
H ++HRD E +ADFGLAR T V T Y AP+ L
Sbjct: 116 CH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVL 172
Query: 685 AYTMAVTEKCDVYSFGVVALEVLMGS 710
+ + D++S G + E++ G+
Sbjct: 173 MGSKKYSTTIDIWSVGCIFAEMVNGT 198
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 99/221 (44%), Gaps = 16/221 (7%)
Query: 500 FEEMIEATEDFHIKYCIGTGGYGSVY--RAQLSSGK--LVALKKLHRSETEEPAFLESFQ 555
F + ++AT + I +G G +G V R +L S K VA+K L TE+ F
Sbjct: 38 FAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFL 94
Query: 556 TEARLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNI 615
EA ++ Q H NI++L G +K + ++ EYME GSL LR + + V +
Sbjct: 95 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK--HDAQFTVIQLVGM 152
Query: 616 VKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVG 675
++ +A + YL VHRD V+DFGL+R+L D G
Sbjct: 153 LRGIASGMKYL---SDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 209
Query: 676 ---TYGYIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHP 712
+ +PE T DV+S+G+V EV+ G P
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 98/200 (49%), Gaps = 10/200 (5%)
Query: 508 EDFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHR 567
E ++ +G G +G V+ + VA+K L AFL+ EA+++ ++RH
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQ----EAQVMKKLRHE 73
Query: 568 NIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLH 627
+V+LY + + ++++ EYM +GSL L+ ++ L + V++ +A ++Y+
Sbjct: 74 KLVQLYAV-VSEEPIYIVIEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVE 131
Query: 628 YDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDS-SNRTLVVGTYGYIAPELAY 686
+ + VHRD VADFGLARL+ + + R + APE A
Sbjct: 132 ---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAAL 188
Query: 687 TMAVTEKCDVYSFGVVALEV 706
T K DV+SFG++ E+
Sbjct: 189 YGRFTIKSDVWSFGILLTEL 208
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 94/193 (48%), Gaps = 10/193 (5%)
Query: 516 IGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGF 575
+G G G V+ + VA+K L + AFL EA L+ Q++H+ +V+LY
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDAFL----AEANLMKQLQHQRLVRLYA- 75
Query: 576 CLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIV 635
+ + +++I EYME GSL L+ ++L K +++ +A ++++ + + +
Sbjct: 76 VVTQEPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIE---ERNYI 131
Query: 636 HRDXXXXXXXXXXXXEAFVADFGLARLLH-PDSSNRTLVVGTYGYIAPELAYTMAVTEKC 694
HRD +ADFGLARL+ + + R + APE T K
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 695 DVYSFGVVALEVL 707
DV+SFG++ E++
Sbjct: 192 DVWSFGILLTEIV 204
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 98/200 (49%), Gaps = 10/200 (5%)
Query: 508 EDFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHR 567
E ++ +G G +G V+ + VA+K L AFL+ EA+++ ++RH
Sbjct: 9 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQ----EAQVMKKLRHE 64
Query: 568 NIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLH 627
+V+LY + + ++++ EYM +GSL L+ ++ L + V++ +A ++Y+
Sbjct: 65 KLVQLYAV-VSEEPIYIVTEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVE 122
Query: 628 YDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDS-SNRTLVVGTYGYIAPELAY 686
+ + VHRD VADFGLARL+ + + R + APE A
Sbjct: 123 ---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAAL 179
Query: 687 TMAVTEKCDVYSFGVVALEV 706
T K DV+SFG++ E+
Sbjct: 180 YGRFTIKSDVWSFGILLTEL 199
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 98/200 (49%), Gaps = 10/200 (5%)
Query: 508 EDFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHR 567
E ++ +G G +G V+ + VA+K L AFL+ EA+++ ++RH
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQ----EAQVMKKLRHE 73
Query: 568 NIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLH 627
+V+LY + + ++++ EYM +GSL L+ ++ L + V++ +A ++Y+
Sbjct: 74 KLVQLYAV-VSEEPIYIVTEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVE 131
Query: 628 YDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDS-SNRTLVVGTYGYIAPELAY 686
+ + VHRD VADFGLARL+ + + R + APE A
Sbjct: 132 ---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAAL 188
Query: 687 TMAVTEKCDVYSFGVVALEV 706
T K DV+SFG++ E+
Sbjct: 189 YGRFTIKSDVWSFGILLTEL 208
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 100/207 (48%), Gaps = 24/207 (11%)
Query: 509 DFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRN 568
D +K+ +G G YG VY L K + +T E +E F EA ++ +I+H N
Sbjct: 33 DITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKHPN 89
Query: 569 IVKLYGFCLHNKCMFLIYEYMERGSLFCVL----RNDVEAVELDWTKRVNIVKSMAHALS 624
+V+L G C +++ EYM G+L L R +V AV L + + ++ A+
Sbjct: 90 LVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVL-----LYMATQISSAME 144
Query: 625 YLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGT---YGYIA 681
YL K + +HRD VADFGL+RL+ D+ T G + A
Sbjct: 145 YLE---KKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTA 199
Query: 682 PE-LAY-TMAVTEKCDVYSFGVVALEV 706
PE LAY T ++ K DV++FGV+ E+
Sbjct: 200 PESLAYNTFSI--KSDVWAFGVLLWEI 224
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 97/198 (48%), Gaps = 11/198 (5%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
IG G G+VY A +++G+ VA+++++ + + E E ++ + ++ NIV
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK---ELIINEILVMRENKNPNIVNYLD 84
Query: 575 FCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSI 634
L ++++ EY+ GSL V+ +D + + + AL +LH + +
Sbjct: 85 SYLVGDELWVVMEYLAGGSLTDVVTETC----MDEGQIAAVCRECLQALEFLHSN---QV 137
Query: 635 VHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYTMAVTEKC 694
+HRD + DFG + P+ S R+ +VGT ++APE+ A K
Sbjct: 138 IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRKAYGPKV 197
Query: 695 DVYSFGVVALEVLMGSHP 712
D++S G++A+E++ G P
Sbjct: 198 DIWSLGIMAIEMIEGEPP 215
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 98/200 (49%), Gaps = 10/200 (5%)
Query: 508 EDFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHR 567
E ++ +G G +G V+ + VA+K L AFL+ EA+++ ++RH
Sbjct: 7 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQ----EAQVMKKLRHE 62
Query: 568 NIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLH 627
+V+LY + + ++++ EYM +GSL L+ ++ L + V++ +A ++Y+
Sbjct: 63 KLVQLYAV-VSEEPIYIVTEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVE 120
Query: 628 YDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDS-SNRTLVVGTYGYIAPELAY 686
+ + VHRD VADFGLARL+ + + R + APE A
Sbjct: 121 ---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAAL 177
Query: 687 TMAVTEKCDVYSFGVVALEV 706
T K DV+SFG++ E+
Sbjct: 178 YGRFTIKSDVWSFGILLTEL 197
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 98/206 (47%), Gaps = 22/206 (10%)
Query: 509 DFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRN 568
D +K+ +G G YG VY L K + +T E +E F EA ++ +I+H N
Sbjct: 260 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKHPN 316
Query: 569 IVKLYGFCLHNKCMFLIYEYMERGSLFCVL----RNDVEAVELDWTKRVNIVKSMAHALS 624
+V+L G C ++I E+M G+L L R +V AV L + + ++ A+
Sbjct: 317 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAME 371
Query: 625 YLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGT---YGYIA 681
YL K + +HR+ VADFGL+RL+ D+ T G + A
Sbjct: 372 YLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTA 426
Query: 682 PE-LAYTMAVTEKCDVYSFGVVALEV 706
PE LAY + K DV++FGV+ E+
Sbjct: 427 PESLAYN-KFSIKSDVWAFGVLLWEI 451
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 98/200 (49%), Gaps = 10/200 (5%)
Query: 508 EDFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHR 567
E ++ +G G +G V+ + VA+K L AFL+ EA+++ ++RH
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQ----EAQVMKKLRHE 73
Query: 568 NIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLH 627
+V+LY + + ++++ EYM +GSL L+ ++ L + V++ +A ++Y+
Sbjct: 74 KLVQLYAV-VSEEPIYIVCEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVE 131
Query: 628 YDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDS-SNRTLVVGTYGYIAPELAY 686
+ + VHRD VADFGLARL+ + + R + APE A
Sbjct: 132 ---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAAL 188
Query: 687 TMAVTEKCDVYSFGVVALEV 706
T K DV+SFG++ E+
Sbjct: 189 YGRFTIKSDVWSFGILLTEL 208
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 100/231 (43%), Gaps = 24/231 (10%)
Query: 499 TFEEMIEATEDF---------HIKYCIGTGGYGSVYRAQLS-SGK---LVALKKLHRSET 545
TFE+ +A +F I+ IG G +G V +L GK VA+K L T
Sbjct: 11 TFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYT 70
Query: 546 EEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAV 605
++ F +EA ++ Q H NI+ L G K + +I EYME GSL LR +
Sbjct: 71 DKQR--RDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRF 128
Query: 606 ELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHP 665
+ + V +++ + + YL S VHRD V+DFG++R+L
Sbjct: 129 TV--IQLVGMLRGIGSGMKYLS---DMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLED 183
Query: 666 DSSNRTLVVG---TYGYIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHP 712
D G + APE T DV+S+G+V EV+ G P
Sbjct: 184 DPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP 234
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 98/206 (47%), Gaps = 12/206 (5%)
Query: 508 EDFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHR 567
E +H IG G YG VY+AQ + G+ ALKK+ R E E+ + E +L +++H
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKI-RLEKEDEGIPSTTIREISILKELKHS 60
Query: 568 NIVKLYGFCLHNKCMFLIYEYMERG--SLFCVLRNDVEAVELDWTKRVNIVKSMAHALSY 625
NIVKLY K + L++E++++ L V +E+V + + + + ++Y
Sbjct: 61 NIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAK-----SFLLQLLNGIAY 115
Query: 626 LHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPE-L 684
H ++HRD E +ADFGLAR T + T Y AP+ L
Sbjct: 116 CH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVL 172
Query: 685 AYTMAVTEKCDVYSFGVVALEVLMGS 710
+ + D++S G + E++ G+
Sbjct: 173 MGSKKYSTTIDIWSVGCIFAEMVNGT 198
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 97/200 (48%), Gaps = 10/200 (5%)
Query: 508 EDFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHR 567
E ++ +G G +G V+ + VA+K L AFL+ EA+++ ++RH
Sbjct: 11 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQ----EAQVMKKLRHE 66
Query: 568 NIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLH 627
+V+LY + + ++++ EYM +GSL L+ + L + V++ +A ++Y+
Sbjct: 67 KLVQLYAV-VSEEPIYIVTEYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYVE 124
Query: 628 YDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDS-SNRTLVVGTYGYIAPELAY 686
+ + VHRD VADFGLARL+ + + R + APE A
Sbjct: 125 ---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAAL 181
Query: 687 TMAVTEKCDVYSFGVVALEV 706
T K DV+SFG++ E+
Sbjct: 182 YGRFTIKSDVWSFGILLTEL 201
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 99/221 (44%), Gaps = 16/221 (7%)
Query: 500 FEEMIEATEDFHIKYCIGTGGYGSVY--RAQLSSGK--LVALKKLHRSETEEPAFLESFQ 555
F + ++AT + I +G G +G V R +L S K VA+K L TE+ F
Sbjct: 26 FAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFL 82
Query: 556 TEARLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNI 615
EA ++ Q H NI++L G +K + ++ EYME GSL LR + + V +
Sbjct: 83 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK--HDAQFTVIQLVGM 140
Query: 616 VKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVG 675
++ +A + YL VHRD V+DFGL+R+L D G
Sbjct: 141 LRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 197
Query: 676 T---YGYIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHP 712
+ +PE T DV+S+G+V EV+ G P
Sbjct: 198 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 238
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 99/221 (44%), Gaps = 16/221 (7%)
Query: 500 FEEMIEATEDFHIKYCIGTGGYGSVY--RAQLSSGK--LVALKKLHRSETEEPAFLESFQ 555
F + ++AT + I +G G +G V R +L S K VA+K L TE+ F
Sbjct: 38 FAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFL 94
Query: 556 TEARLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNI 615
EA ++ Q H NI++L G +K + ++ EYME GSL LR + + V +
Sbjct: 95 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK--HDAQFTVIQLVGM 152
Query: 616 VKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVG 675
++ +A + YL VHRD V+DFGL+R+L D G
Sbjct: 153 LRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 209
Query: 676 ---TYGYIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHP 712
+ +PE T DV+S+G+V EV+ G P
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 97/200 (48%), Gaps = 10/200 (5%)
Query: 508 EDFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHR 567
E ++ +G G +G V+ + VA+K L AFL+ EA+++ ++RH
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQ----EAQVMKKLRHE 239
Query: 568 NIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLH 627
+V+LY + + ++++ EYM +GSL L+ + L + V++ +A ++Y+
Sbjct: 240 KLVQLYAV-VSEEPIYIVTEYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYVE 297
Query: 628 YDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDS-SNRTLVVGTYGYIAPELAY 686
+ + VHRD VADFGLARL+ + + R + APE A
Sbjct: 298 ---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAAL 354
Query: 687 TMAVTEKCDVYSFGVVALEV 706
T K DV+SFG++ E+
Sbjct: 355 YGRFTIKSDVWSFGILLTEL 374
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 95/193 (49%), Gaps = 10/193 (5%)
Query: 516 IGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGF 575
+G G +G V+ + VA+K L + AFL EA L+ Q++H+ +V+LY
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFL----AEANLMKQLQHQRLVRLYA- 71
Query: 576 CLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIV 635
+ + +++I EYME GSL L+ ++L K +++ +A ++++ + + +
Sbjct: 72 VVTQEPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIE---ERNYI 127
Query: 636 HRDXXXXXXXXXXXXEAFVADFGLARLLHPDS-SNRTLVVGTYGYIAPELAYTMAVTEKC 694
HR+ +ADFGLARL+ + + R + APE T K
Sbjct: 128 HRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 187
Query: 695 DVYSFGVVALEVL 707
DV+SFG++ E++
Sbjct: 188 DVWSFGILLTEIV 200
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 94/211 (44%), Gaps = 22/211 (10%)
Query: 516 IGTGGYGSVYRAQLSSG-KLVALKKLHRSETEE----------PAFLESFQTEARLLSQI 564
+G+G YG V + +G A+K + +S+ ++ F E E LL +
Sbjct: 44 LGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL 103
Query: 565 RHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALS 624
H NI+KL+ K +L+ E+ E G LF + N + E D NI+K + +
Sbjct: 104 DHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECD---AANIMKQILSGIC 160
Query: 625 YLHYDCKPSIVHRDXXXXXXXXXXXXEAF---VADFGLARLLHPDSSNRTLVVGTYGYIA 681
YLH K +IVHRD + DFGL+ D R +GT YIA
Sbjct: 161 YLH---KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDR-LGTAYYIA 216
Query: 682 PELAYTMAVTEKCDVYSFGVVALEVLMGSHP 712
PE+ EKCDV+S GV+ +L G P
Sbjct: 217 PEVL-KKKYNEKCDVWSCGVIMYILLCGYPP 246
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 97/200 (48%), Gaps = 10/200 (5%)
Query: 508 EDFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHR 567
E ++ +G G +G V+ + VA+K L AFL+ EA+++ ++RH
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQ----EAQVMKKLRHE 239
Query: 568 NIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLH 627
+V+LY + + ++++ EYM +GSL L+ + L + V++ +A ++Y+
Sbjct: 240 KLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYVE 297
Query: 628 YDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDS-SNRTLVVGTYGYIAPELAY 686
+ + VHRD VADFGLARL+ + + R + APE A
Sbjct: 298 ---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAAL 354
Query: 687 TMAVTEKCDVYSFGVVALEV 706
T K DV+SFG++ E+
Sbjct: 355 YGRFTIKSDVWSFGILLTEL 374
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 99/221 (44%), Gaps = 16/221 (7%)
Query: 500 FEEMIEATEDFHIKYCIGTGGYGSVY--RAQLSSGK--LVALKKLHRSETEEPAFLESFQ 555
F + ++AT + I +G G +G V R +L S K VA+K L TE+ F
Sbjct: 38 FAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFL 94
Query: 556 TEARLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNI 615
EA ++ Q H NI++L G +K + ++ EYME GSL LR + + V +
Sbjct: 95 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK--HDAQFTVIQLVGM 152
Query: 616 VKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVG 675
++ +A + YL VHRD V+DFGL+R+L D G
Sbjct: 153 LRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 209
Query: 676 ---TYGYIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHP 712
+ +PE T DV+S+G+V EV+ G P
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 99/221 (44%), Gaps = 16/221 (7%)
Query: 500 FEEMIEATEDFHIKYCIGTGGYGSVY--RAQLSSGK--LVALKKLHRSETEEPAFLESFQ 555
F + ++AT + I +G G +G V R +L S K VA+K L TE+ F
Sbjct: 38 FAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFL 94
Query: 556 TEARLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNI 615
EA ++ Q H NI++L G +K + ++ EYME GSL LR + + V +
Sbjct: 95 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK--HDAQFTVIQLVGM 152
Query: 616 VKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVG 675
++ +A + YL VHRD V+DFGL+R+L D G
Sbjct: 153 LRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 209
Query: 676 ---TYGYIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHP 712
+ +PE T DV+S+G+V EV+ G P
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 99/221 (44%), Gaps = 16/221 (7%)
Query: 500 FEEMIEATEDFHIKYCIGTGGYGSVY--RAQLSSGK--LVALKKLHRSETEEPAFLESFQ 555
F + ++AT + I +G G +G V R +L S K VA+K L TE+ F
Sbjct: 38 FAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFL 94
Query: 556 TEARLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNI 615
EA ++ Q H NI++L G +K + ++ EYME GSL LR + + V +
Sbjct: 95 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK--HDAQFTVIQLVGM 152
Query: 616 VKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVG 675
++ +A + YL VHRD V+DFGL+R+L D G
Sbjct: 153 LRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 209
Query: 676 ---TYGYIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHP 712
+ +PE T DV+S+G+V EV+ G P
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 98/221 (44%), Gaps = 16/221 (7%)
Query: 500 FEEMIEATEDFHIKYCIGTGGYGSVY--RAQLSSGK--LVALKKLHRSETEEPAFLESFQ 555
F + ++AT + I +G G +G V R +L S K VA+K L TE+ F
Sbjct: 38 FAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFL 94
Query: 556 TEARLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNI 615
EA ++ Q H NI++L G +K + ++ EYME GSL LR + + V +
Sbjct: 95 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK--HDAQFTVIQLVGM 152
Query: 616 VKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVG 675
++ +A + YL VHRD V+DFGL R+L D G
Sbjct: 153 LRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRG 209
Query: 676 ---TYGYIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHP 712
+ +PE T DV+S+G+V EV+ G P
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 99/221 (44%), Gaps = 16/221 (7%)
Query: 500 FEEMIEATEDFHIKYCIGTGGYGSVY--RAQLSSGK--LVALKKLHRSETEEPAFLESFQ 555
F + ++AT + I +G G +G V R +L S K VA+K L TE+ F
Sbjct: 36 FAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFL 92
Query: 556 TEARLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNI 615
EA ++ Q H NI++L G +K + ++ EYME GSL LR + + V +
Sbjct: 93 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK--HDAQFTVIQLVGM 150
Query: 616 VKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVG 675
++ +A + YL VHRD V+DFGL+R+L D G
Sbjct: 151 LRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 207
Query: 676 ---TYGYIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHP 712
+ +PE T DV+S+G+V EV+ G P
Sbjct: 208 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 248
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 97/200 (48%), Gaps = 10/200 (5%)
Query: 508 EDFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHR 567
E ++ +G G +G V+ + VA+K L AFL+ EA+++ ++RH
Sbjct: 15 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQ----EAQVMKKLRHE 70
Query: 568 NIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLH 627
+V+LY + + ++++ EYM +GSL L+ + L + V++ +A ++Y+
Sbjct: 71 KLVQLYAV-VSEEPIYIVTEYMNKGSLLDFLKGETGKY-LRLPQLVDMSAQIASGMAYVE 128
Query: 628 YDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDS-SNRTLVVGTYGYIAPELAY 686
+ + VHRD VADFGLARL+ + + R + APE A
Sbjct: 129 ---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAAL 185
Query: 687 TMAVTEKCDVYSFGVVALEV 706
T K DV+SFG++ E+
Sbjct: 186 YGRFTIKSDVWSFGILLTEL 205
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 97/200 (48%), Gaps = 10/200 (5%)
Query: 508 EDFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHR 567
E ++ +G G +G V+ + VA+K L AFL+ EA+++ ++RH
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQ----EAQVMKKLRHE 239
Query: 568 NIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLH 627
+V+LY + + ++++ EYM +GSL L+ + L + V++ +A ++Y+
Sbjct: 240 KLVQLYAV-VSEEPIYIVGEYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYVE 297
Query: 628 YDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDS-SNRTLVVGTYGYIAPELAY 686
+ + VHRD VADFGLARL+ + + R + APE A
Sbjct: 298 ---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAAL 354
Query: 687 TMAVTEKCDVYSFGVVALEV 706
T K DV+SFG++ E+
Sbjct: 355 YGRFTIKSDVWSFGILLTEL 374
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 99/221 (44%), Gaps = 16/221 (7%)
Query: 500 FEEMIEATEDFHIKYCIGTGGYGSVY--RAQLSSGK--LVALKKLHRSETEEPAFLESFQ 555
F + ++AT + I +G G +G V R +L S K VA+K L TE+ F
Sbjct: 9 FAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFL 65
Query: 556 TEARLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNI 615
EA ++ Q H NI++L G +K + ++ EYME GSL LR + + V +
Sbjct: 66 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK--HDAQFTVIQLVGM 123
Query: 616 VKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVG 675
++ +A + YL VHRD V+DFGL+R+L D G
Sbjct: 124 LRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 180
Query: 676 T---YGYIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHP 712
+ +PE T DV+S+G+V EV+ G P
Sbjct: 181 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 221
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 97/200 (48%), Gaps = 10/200 (5%)
Query: 508 EDFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHR 567
E ++ +G G +G V+ + VA+K L AFL+ EA+++ ++RH
Sbjct: 15 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQ----EAQVMKKLRHE 70
Query: 568 NIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLH 627
+V+LY + + ++++ EYM +GSL L+ + L + V++ +A ++Y+
Sbjct: 71 KLVQLYAV-VSEEPIYIVTEYMNKGSLLDFLKGETGKY-LRLPQLVDMSAQIASGMAYVE 128
Query: 628 YDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDS-SNRTLVVGTYGYIAPELAY 686
+ + VHRD VADFGLARL+ + + R + APE A
Sbjct: 129 ---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAAL 185
Query: 687 TMAVTEKCDVYSFGVVALEV 706
T K DV+SFG++ E+
Sbjct: 186 YGRFTIKSDVWSFGILLTEL 205
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 97/200 (48%), Gaps = 10/200 (5%)
Query: 508 EDFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHR 567
E ++ +G G +G V+ + VA+K L AFL+ EA+++ ++RH
Sbjct: 185 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEAFLQ----EAQVMKKLRHE 240
Query: 568 NIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLH 627
+V+LY + + ++++ EYM +GSL L+ ++ L + V++ +A ++Y+
Sbjct: 241 KLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVE 298
Query: 628 YDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDS-SNRTLVVGTYGYIAPELAY 686
+ + VHRD VADFGL RL+ + + R + APE A
Sbjct: 299 ---RMNYVHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAAL 355
Query: 687 TMAVTEKCDVYSFGVVALEV 706
T K DV+SFG++ E+
Sbjct: 356 YGRFTIKSDVWSFGILLTEL 375
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 94/193 (48%), Gaps = 9/193 (4%)
Query: 516 IGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGF 575
+G G +G V+ ++ VA+K L AFLE EA L+ ++H +V+LY
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLE----EANLMKTLQHDKLVRLYAV 75
Query: 576 CLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIV 635
+ +++I E+M +GSL L++D E ++ K ++ +A ++Y+ + + +
Sbjct: 76 VTKEEPIYIITEFMAKGSLLDFLKSD-EGGKVLLPKLIDFSAQIAEGMAYIE---RKNYI 131
Query: 636 HRDXXXXXXXXXXXXEAFVADFGLARLLHPDS-SNRTLVVGTYGYIAPELAYTMAVTEKC 694
HRD +ADFGLAR++ + + R + APE T K
Sbjct: 132 HRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKS 191
Query: 695 DVYSFGVVALEVL 707
+V+SFG++ E++
Sbjct: 192 NVWSFGILLYEIV 204
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 96/200 (48%), Gaps = 10/200 (5%)
Query: 508 EDFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHR 567
E ++ +G G +G V+ + VA+K L AFL+ EA+++ ++RH
Sbjct: 8 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQ----EAQVMKKLRHE 63
Query: 568 NIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLH 627
+V+LY + + + ++ EYM +GSL L+ + L + V++ +A ++Y+
Sbjct: 64 KLVQLYAV-VSEEPIXIVTEYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYVE 121
Query: 628 YDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHP-DSSNRTLVVGTYGYIAPELAY 686
+ + VHRD VADFGLARL+ + + R + APE A
Sbjct: 122 ---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAAL 178
Query: 687 TMAVTEKCDVYSFGVVALEV 706
T K DV+SFG++ E+
Sbjct: 179 YGRFTIKSDVWSFGILLTEL 198
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 97/200 (48%), Gaps = 10/200 (5%)
Query: 508 EDFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHR 567
E ++ +G G +G V+ + VA+K L AFL+ EA+++ ++RH
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQ----EAQVMKKLRHE 73
Query: 568 NIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLH 627
+V+LY + + ++++ EYM +G L L+ ++ L + V++ +A ++Y+
Sbjct: 74 KLVQLYAV-VSEEPIYIVMEYMSKGCLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVE 131
Query: 628 YDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDS-SNRTLVVGTYGYIAPELAY 686
+ + VHRD VADFGLARL+ + + R + APE A
Sbjct: 132 ---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAAL 188
Query: 687 TMAVTEKCDVYSFGVVALEV 706
T K DV+SFG++ E+
Sbjct: 189 YGRFTIKSDVWSFGILLTEL 208
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 97/198 (48%), Gaps = 11/198 (5%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
IG G G+VY A +++G+ VA+++++ + + E E ++ + ++ NIV
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK---ELIINEILVMRENKNPNIVNYLD 85
Query: 575 FCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSI 634
L ++++ EY+ GSL V+ +D + + + AL +LH + +
Sbjct: 86 SYLVGDELWVVMEYLAGGSLTDVVTETC----MDEGQIAAVCRECLQALEFLHSN---QV 138
Query: 635 VHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYTMAVTEKC 694
+HR+ + DFG + P+ S R+ +VGT ++APE+ A K
Sbjct: 139 IHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKV 198
Query: 695 DVYSFGVVALEVLMGSHP 712
D++S G++A+E++ G P
Sbjct: 199 DIWSLGIMAIEMIEGEPP 216
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 97/200 (48%), Gaps = 10/200 (5%)
Query: 508 EDFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHR 567
E ++ +G G +G V+ + VA+K L AFL+ EA+++ ++RH
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQ----EAQVMKKLRHE 73
Query: 568 NIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLH 627
+V+LY + + ++++ EYM +G L L+ ++ L + V++ +A ++Y+
Sbjct: 74 KLVQLYAV-VSEEPIYIVTEYMSKGCLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVE 131
Query: 628 YDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDS-SNRTLVVGTYGYIAPELAY 686
+ + VHRD VADFGLARL+ + + R + APE A
Sbjct: 132 ---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAAL 188
Query: 687 TMAVTEKCDVYSFGVVALEV 706
T K DV+SFG++ E+
Sbjct: 189 YGRFTIKSDVWSFGILLTEL 208
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 94/198 (47%), Gaps = 12/198 (6%)
Query: 516 IGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGF 575
+G G YG VY+A+ S G++VALK++ R + E+ + E LL ++ H NIV L
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRI-RLDAEDEGIPSTAIREISLLKELHHPNIVSLIDV 87
Query: 576 CLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTK--RVNIVKSMAHALSYLHYDCKPS 633
+C+ L++E+ME+ L VL + ++ K +++ +AH +
Sbjct: 88 IHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQH-------R 139
Query: 634 IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPE-LAYTMAVTE 692
I+HRD +ADFGLAR + T V T Y AP+ L + +
Sbjct: 140 ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYST 199
Query: 693 KCDVYSFGVVALEVLMGS 710
D++S G + E++ G
Sbjct: 200 SVDIWSIGCIFAEMITGK 217
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 94/198 (47%), Gaps = 12/198 (6%)
Query: 516 IGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGF 575
+G G YG VY+A+ S G++VALK++ R + E+ + E LL ++ H NIV L
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRI-RLDAEDEGIPSTAIREISLLKELHHPNIVSLIDV 87
Query: 576 CLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTK--RVNIVKSMAHALSYLHYDCKPS 633
+C+ L++E+ME+ L VL + ++ K +++ +AH +
Sbjct: 88 IHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQH-------R 139
Query: 634 IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPE-LAYTMAVTE 692
I+HRD +ADFGLAR + T V T Y AP+ L + +
Sbjct: 140 ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYST 199
Query: 693 KCDVYSFGVVALEVLMGS 710
D++S G + E++ G
Sbjct: 200 SVDIWSIGCIFAEMITGK 217
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 100/227 (44%), Gaps = 31/227 (13%)
Query: 509 DFHIKYCIGTGGYGSVYRAQL------SSGKLVALKKLHRSETEEPAFLESFQTEARLLS 562
D +K+ +G G +G V+ A+ LVA+K L E E A + FQ EA LL+
Sbjct: 42 DIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKAL--KEASESA-RQDFQREAELLT 98
Query: 563 QIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRN------------DVEAVELDWT 610
++H++IV+ +G C + + +++EYM G L LR+ DV L
Sbjct: 99 MLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLG 158
Query: 611 KRVNIVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDS--- 667
+ + + +A + YL VHRD + DFG++R ++
Sbjct: 159 QLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYR 215
Query: 668 -SNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLM-GSHP 712
RT++ ++ PE T + DV+SFGVV E+ G P
Sbjct: 216 VGGRTML--PIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 260
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 92/212 (43%), Gaps = 17/212 (8%)
Query: 508 EDFHIKYCIGTGGYGSVYRAQL-SSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRH 566
ED + IG G +G V+ +L + LVA+K ET P F EAR+L Q H
Sbjct: 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCR--ETLPPDLKAKFLQEARILKQYSH 171
Query: 567 RNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYL 626
NIV+L G C + ++++ E ++ G LR E L + +V A + YL
Sbjct: 172 PNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRT--EGARLRVKTLLQMVGDAAAGMEYL 229
Query: 627 HYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLAR-----LLHPDSSNRTLVVGTYGYIA 681
C +HRD ++DFG++R + R + V + A
Sbjct: 230 ESKC---CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPV---KWTA 283
Query: 682 PELAYTMAVTEKCDVYSFGVVALEVL-MGSHP 712
PE + + DV+SFG++ E +G+ P
Sbjct: 284 PEALNYGRYSSESDVWSFGILLWETFSLGASP 315
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 96/200 (48%), Gaps = 15/200 (7%)
Query: 516 IGTGGYGSVYRAQL-SSGKLVALKK--LHRSETEEPAFLESFQTEARLLSQIRHRNIVKL 572
IG G G V A + SSGKLVA+KK L + + E F E ++ +H N+V++
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF-----NEVVIMRDYQHENVVEM 213
Query: 573 YGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKP 632
Y L ++++ E++E G+L + V ++ + + ++ ALS LH
Sbjct: 214 YNSYLVGDELWVVMEFLEGGALTDI----VTHTRMNEEQIAAVCLAVLQALSVLHAQ--- 266
Query: 633 SIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYTMAVTE 692
++HRD ++DFG + + R +VGT ++APEL +
Sbjct: 267 GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGP 326
Query: 693 KCDVYSFGVVALEVLMGSHP 712
+ D++S G++ +E++ G P
Sbjct: 327 EVDIWSLGIMVIEMVDGEPP 346
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 98/221 (44%), Gaps = 16/221 (7%)
Query: 500 FEEMIEATEDFHIKYCIGTGGYGSVYRAQLS-SGK---LVALKKLHRSETEEPAFLESFQ 555
F + I+A+ I+ IG G +G V +L GK VA+K L T++ F
Sbjct: 1 FAKEIDAS-CIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQR--RDFL 57
Query: 556 TEARLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNI 615
+EA ++ Q H NI+ L G K + +I EYME GSL LR + + + V +
Sbjct: 58 SEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTV--IQLVGM 115
Query: 616 VKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVG 675
++ + + YL S VHRD V+DFG++R+L D G
Sbjct: 116 LRGIGSGMKYLS---DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRG 172
Query: 676 ---TYGYIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHP 712
+ APE T DV+S+G+V EV+ G P
Sbjct: 173 GKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP 213
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 98/221 (44%), Gaps = 16/221 (7%)
Query: 500 FEEMIEATEDFHIKYCIGTGGYGSVYRAQLS-SGK---LVALKKLHRSETEEPAFLESFQ 555
F + I+A+ I+ IG G +G V +L GK VA+K L T++ F
Sbjct: 7 FAKEIDAS-CIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQR--RDFL 63
Query: 556 TEARLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNI 615
+EA ++ Q H NI+ L G K + +I EYME GSL LR + + + V +
Sbjct: 64 SEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTV--IQLVGM 121
Query: 616 VKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVG 675
++ + + YL S VHRD V+DFG++R+L D G
Sbjct: 122 LRGIGSGMKYLS---DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRG 178
Query: 676 ---TYGYIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHP 712
+ APE T DV+S+G+V EV+ G P
Sbjct: 179 GKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP 219
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 96/200 (48%), Gaps = 15/200 (7%)
Query: 516 IGTGGYGSVYRAQL-SSGKLVALKK--LHRSETEEPAFLESFQTEARLLSQIRHRNIVKL 572
IG G G V A + SSGKLVA+KK L + + E F E ++ +H N+V++
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF-----NEVVIMRDYQHENVVEM 136
Query: 573 YGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKP 632
Y L ++++ E++E G+L + V ++ + + ++ ALS LH
Sbjct: 137 YNSYLVGDELWVVMEFLEGGALTDI----VTHTRMNEEQIAAVCLAVLQALSVLHAQ--- 189
Query: 633 SIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYTMAVTE 692
++HRD ++DFG + + R +VGT ++APEL +
Sbjct: 190 GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGP 249
Query: 693 KCDVYSFGVVALEVLMGSHP 712
+ D++S G++ +E++ G P
Sbjct: 250 EVDIWSLGIMVIEMVDGEPP 269
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 92/212 (43%), Gaps = 17/212 (8%)
Query: 508 EDFHIKYCIGTGGYGSVYRAQL-SSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRH 566
ED + IG G +G V+ +L + LVA+K ET P F EAR+L Q H
Sbjct: 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCR--ETLPPDLKAKFLQEARILKQYSH 171
Query: 567 RNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYL 626
NIV+L G C + ++++ E ++ G LR E L + +V A + YL
Sbjct: 172 PNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRT--EGARLRVKTLLQMVGDAAAGMEYL 229
Query: 627 HYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLAR-----LLHPDSSNRTLVVGTYGYIA 681
C +HRD ++DFG++R + R + V + A
Sbjct: 230 ESKC---CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPV---KWTA 283
Query: 682 PELAYTMAVTEKCDVYSFGVVALEVL-MGSHP 712
PE + + DV+SFG++ E +G+ P
Sbjct: 284 PEALNYGRYSSESDVWSFGILLWETFSLGASP 315
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 91/203 (44%), Gaps = 15/203 (7%)
Query: 516 IGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGF 575
+GTG +G V + VA+K + E F+E EA+++ + H +V+LYG
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIE----EAKVMMNLSHEKLVQLYGV 87
Query: 576 CLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIV 635
C + +F+I EYM G L LR + + + + K + A+ YL +
Sbjct: 88 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQ--QLLEMCKDVCEAMEYLE---SKQFL 142
Query: 636 HRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGT---YGYIAPELAYTMAVTE 692
HRD V+DFGL+R + D T VG+ + PE+ +
Sbjct: 143 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDD--EETSSVGSKFPVRWSPPEVLMYSKFSS 200
Query: 693 KCDVYSFGVVALEVL-MGSHPTD 714
K D+++FGV+ E+ +G P +
Sbjct: 201 KSDIWAFGVLMWEIYSLGKMPYE 223
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 96/200 (48%), Gaps = 15/200 (7%)
Query: 516 IGTGGYGSVYRAQL-SSGKLVALKK--LHRSETEEPAFLESFQTEARLLSQIRHRNIVKL 572
IG G G V A + SSGKLVA+KK L + + E F E ++ +H N+V++
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF-----NEVVIMRDYQHENVVEM 91
Query: 573 YGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKP 632
Y L ++++ E++E G+L + V ++ + + ++ ALS LH
Sbjct: 92 YNSYLVGDELWVVMEFLEGGALTDI----VTHTRMNEEQIAAVCLAVLQALSVLHAQ--- 144
Query: 633 SIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYTMAVTE 692
++HRD ++DFG + + R +VGT ++APEL +
Sbjct: 145 GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGP 204
Query: 693 KCDVYSFGVVALEVLMGSHP 712
+ D++S G++ +E++ G P
Sbjct: 205 EVDIWSLGIMVIEMVDGEPP 224
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 96/200 (48%), Gaps = 15/200 (7%)
Query: 516 IGTGGYGSVYRAQL-SSGKLVALKK--LHRSETEEPAFLESFQTEARLLSQIRHRNIVKL 572
IG G G V A + SSGKLVA+KK L + + E F E ++ +H N+V++
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF-----NEVVIMRDYQHENVVEM 93
Query: 573 YGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKP 632
Y L ++++ E++E G+L + V ++ + + ++ ALS LH
Sbjct: 94 YNSYLVGDELWVVMEFLEGGALTDI----VTHTRMNEEQIAAVCLAVLQALSVLHAQ--- 146
Query: 633 SIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYTMAVTE 692
++HRD ++DFG + + R +VGT ++APEL +
Sbjct: 147 GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGP 206
Query: 693 KCDVYSFGVVALEVLMGSHP 712
+ D++S G++ +E++ G P
Sbjct: 207 EVDIWSLGIMVIEMVDGEPP 226
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 96/200 (48%), Gaps = 15/200 (7%)
Query: 516 IGTGGYGSVYRAQL-SSGKLVALKK--LHRSETEEPAFLESFQTEARLLSQIRHRNIVKL 572
IG G G V A + SSGKLVA+KK L + + E F E ++ +H N+V++
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF-----NEVVIMRDYQHENVVEM 82
Query: 573 YGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKP 632
Y L ++++ E++E G+L + V ++ + + ++ ALS LH
Sbjct: 83 YNSYLVGDELWVVMEFLEGGALTDI----VTHTRMNEEQIAAVCLAVLQALSVLHAQ--- 135
Query: 633 SIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYTMAVTE 692
++HRD ++DFG + + R +VGT ++APEL +
Sbjct: 136 GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGP 195
Query: 693 KCDVYSFGVVALEVLMGSHP 712
+ D++S G++ +E++ G P
Sbjct: 196 EVDIWSLGIMVIEMVDGEPP 215
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 100/227 (44%), Gaps = 31/227 (13%)
Query: 509 DFHIKYCIGTGGYGSVYRAQL------SSGKLVALKKLHRSETEEPAFLESFQTEARLLS 562
D +K+ +G G +G V+ A+ LVA+K L E E A + FQ EA LL+
Sbjct: 13 DIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKAL--KEASESA-RQDFQREAELLT 69
Query: 563 QIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRN------------DVEAVELDWT 610
++H++IV+ +G C + + +++EYM G L LR+ DV L
Sbjct: 70 MLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLG 129
Query: 611 KRVNIVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDS--- 667
+ + + +A + YL VHRD + DFG++R ++
Sbjct: 130 QLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYR 186
Query: 668 -SNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHP 712
RT++ ++ PE T + DV+SFGVV E+ G P
Sbjct: 187 VGGRTML--PIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 231
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 96/200 (48%), Gaps = 15/200 (7%)
Query: 516 IGTGGYGSVYRAQL-SSGKLVALKK--LHRSETEEPAFLESFQTEARLLSQIRHRNIVKL 572
IG G G V A + SSGKLVA+KK L + + E F E ++ +H N+V++
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF-----NEVVIMRDYQHENVVEM 86
Query: 573 YGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKP 632
Y L ++++ E++E G+L + V ++ + + ++ ALS LH
Sbjct: 87 YNSYLVGDELWVVMEFLEGGALTDI----VTHTRMNEEQIAAVCLAVLQALSVLHAQ--- 139
Query: 633 SIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYTMAVTE 692
++HRD ++DFG + + R +VGT ++APEL +
Sbjct: 140 GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGP 199
Query: 693 KCDVYSFGVVALEVLMGSHP 712
+ D++S G++ +E++ G P
Sbjct: 200 EVDIWSLGIMVIEMVDGEPP 219
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 100/227 (44%), Gaps = 31/227 (13%)
Query: 509 DFHIKYCIGTGGYGSVYRAQL------SSGKLVALKKLHRSETEEPAFLESFQTEARLLS 562
D +K+ +G G +G V+ A+ LVA+K L E E A + FQ EA LL+
Sbjct: 19 DIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKAL--KEASESA-RQDFQREAELLT 75
Query: 563 QIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRN------------DVEAVELDWT 610
++H++IV+ +G C + + +++EYM G L LR+ DV L
Sbjct: 76 MLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLG 135
Query: 611 KRVNIVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDS--- 667
+ + + +A + YL VHRD + DFG++R ++
Sbjct: 136 QLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYR 192
Query: 668 -SNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHP 712
RT++ ++ PE T + DV+SFGVV E+ G P
Sbjct: 193 VGGRTML--PIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 237
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 91/203 (44%), Gaps = 15/203 (7%)
Query: 516 IGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGF 575
+GTG +G V + VA+K + E F+E EA+++ + H +V+LYG
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIE----EAKVMMNLSHEKLVQLYGV 87
Query: 576 CLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIV 635
C + +F+I EYM G L LR + + + + K + A+ YL +
Sbjct: 88 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQ--QLLEMCKDVCEAMEYLE---SKQFL 142
Query: 636 HRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGT---YGYIAPELAYTMAVTE 692
HRD V+DFGL+R + D T VG+ + PE+ +
Sbjct: 143 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDD--EYTSSVGSKFPVRWSPPEVLMYSKFSS 200
Query: 693 KCDVYSFGVVALEVL-MGSHPTD 714
K D+++FGV+ E+ +G P +
Sbjct: 201 KSDIWAFGVLMWEIYSLGKMPYE 223
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 98/221 (44%), Gaps = 16/221 (7%)
Query: 500 FEEMIEATEDFHIKYCIGTGGYGSVY--RAQLSSGK--LVALKKLHRSETEEPAFLESFQ 555
F + ++AT + I +G G +G V R +L S K VA+K L TE+ F
Sbjct: 38 FAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFL 94
Query: 556 TEARLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNI 615
EA ++ Q H NI++L G +K + ++ E ME GSL LR + + V +
Sbjct: 95 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRK--HDAQFTVIQLVGM 152
Query: 616 VKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVG 675
++ +A + YL VHRD V+DFGL+R+L D G
Sbjct: 153 LRGIASGMKYL---SDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 209
Query: 676 ---TYGYIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHP 712
+ +PE T DV+S+G+V EV+ G P
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 91/203 (44%), Gaps = 15/203 (7%)
Query: 516 IGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGF 575
+GTG +G V + VA+K + E F+E EA+++ + H +V+LYG
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIE----EAKVMMNLSHEKLVQLYGV 72
Query: 576 CLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIV 635
C + +F+I EYM G L LR + + + + K + A+ YL +
Sbjct: 73 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQ--QLLEMCKDVCEAMEYLE---SKQFL 127
Query: 636 HRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGT---YGYIAPELAYTMAVTE 692
HRD V+DFGL+R + D T VG+ + PE+ +
Sbjct: 128 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDD--EYTSSVGSKFPVRWSPPEVLMYSKFSS 185
Query: 693 KCDVYSFGVVALEVL-MGSHPTD 714
K D+++FGV+ E+ +G P +
Sbjct: 186 KSDIWAFGVLMWEIYSLGKMPYE 208
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 98/221 (44%), Gaps = 16/221 (7%)
Query: 500 FEEMIEATEDFHIKYCIGTGGYGSVY--RAQLSSGK--LVALKKLHRSETEEPAFLESFQ 555
F + ++AT + I +G G +G V R +L S K VA+K L TE+ F
Sbjct: 38 FAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFL 94
Query: 556 TEARLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNI 615
EA ++ Q H NI++L G +K + ++ E ME GSL LR + + V +
Sbjct: 95 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRK--HDAQFTVIQLVGM 152
Query: 616 VKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVG 675
++ +A + YL VHRD V+DFGL+R+L D G
Sbjct: 153 LRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 209
Query: 676 ---TYGYIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHP 712
+ +PE T DV+S+G+V EV+ G P
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 91/197 (46%), Gaps = 18/197 (9%)
Query: 516 IGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGF 575
IG+G +G V+ + VA+K + E F+E EA ++ ++ H +V+LYG
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSEDDFIE----EAEVMMKLSHPKLVQLYGV 90
Query: 576 CLHNKCMFLIYEYMERGSLFCVLRND--VEAVELDWTKRVNIVKSMAHALSYLHYDCKPS 633
CL + L++E+ME G L LR + A E +++ + MA YL C
Sbjct: 91 CLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMA----YLEEAC--- 143
Query: 634 IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGT---YGYIAPELAYTMAV 690
++HRD V+DFG+ R + D T GT + +PE+
Sbjct: 144 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD--QYTSSTGTKFPVKWASPEVFSFSRY 201
Query: 691 TEKCDVYSFGVVALEVL 707
+ K DV+SFGV+ EV
Sbjct: 202 SSKSDVWSFGVLMWEVF 218
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 91/203 (44%), Gaps = 15/203 (7%)
Query: 516 IGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGF 575
+GTG +G V + VA+K + E F+E EA+++ + H +V+LYG
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIE----EAKVMMNLSHEKLVQLYGV 78
Query: 576 CLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIV 635
C + +F+I EYM G L LR + + + + K + A+ YL +
Sbjct: 79 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQ--QLLEMCKDVCEAMEYLE---SKQFL 133
Query: 636 HRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGT---YGYIAPELAYTMAVTE 692
HRD V+DFGL+R + D T VG+ + PE+ +
Sbjct: 134 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDD--EYTSSVGSKFPVRWSPPEVLMYSKFSS 191
Query: 693 KCDVYSFGVVALEVL-MGSHPTD 714
K D+++FGV+ E+ +G P +
Sbjct: 192 KSDIWAFGVLMWEIYSLGKMPYE 214
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 91/203 (44%), Gaps = 15/203 (7%)
Query: 516 IGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGF 575
+GTG +G V + VA+K + E F+E EA+++ + H +V+LYG
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIE----EAKVMMNLSHEKLVQLYGV 71
Query: 576 CLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIV 635
C + +F+I EYM G L LR + + + + K + A+ YL +
Sbjct: 72 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQ--QLLEMCKDVCEAMEYLE---SKQFL 126
Query: 636 HRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGT---YGYIAPELAYTMAVTE 692
HRD V+DFGL+R + D T VG+ + PE+ +
Sbjct: 127 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDD--EYTSSVGSKFPVRWSPPEVLMYSKFSS 184
Query: 693 KCDVYSFGVVALEVL-MGSHPTD 714
K D+++FGV+ E+ +G P +
Sbjct: 185 KSDIWAFGVLMWEIYSLGKMPYE 207
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 98/221 (44%), Gaps = 16/221 (7%)
Query: 500 FEEMIEATEDFHIKYCIGTGGYGSVY--RAQLSSGK--LVALKKLHRSETEEPAFLESFQ 555
F + ++AT + I +G G +G V R +L S K VA+K L TE+ F
Sbjct: 9 FAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFL 65
Query: 556 TEARLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNI 615
EA ++ Q H NI++L G +K + ++ E ME GSL LR + + V +
Sbjct: 66 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRK--HDAQFTVIQLVGM 123
Query: 616 VKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVG 675
++ +A + YL VHRD V+DFGL+R+L D G
Sbjct: 124 LRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 180
Query: 676 T---YGYIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHP 712
+ +PE T DV+S+G+V EV+ G P
Sbjct: 181 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 221
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 91/203 (44%), Gaps = 15/203 (7%)
Query: 516 IGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGF 575
+GTG +G V + VA+K + E F+E EA+++ + H +V+LYG
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIE----EAKVMMNLSHEKLVQLYGV 67
Query: 576 CLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIV 635
C + +F+I EYM G L LR + + + + K + A+ YL +
Sbjct: 68 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQ--QLLEMCKDVCEAMEYLE---SKQFL 122
Query: 636 HRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGT---YGYIAPELAYTMAVTE 692
HRD V+DFGL+R + D + VG+ + PE+ +
Sbjct: 123 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSS--VGSKFPVRWSPPEVLMYSKFSS 180
Query: 693 KCDVYSFGVVALEVL-MGSHPTD 714
K D+++FGV+ E+ +G P +
Sbjct: 181 KSDIWAFGVLMWEIYSLGKMPYE 203
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 91/197 (46%), Gaps = 18/197 (9%)
Query: 516 IGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGF 575
IG+G +G V+ + VA+K + E F+E EA ++ ++ H +V+LYG
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIE----EAEVMMKLSHPKLVQLYGV 70
Query: 576 CLHNKCMFLIYEYMERGSLFCVLRND--VEAVELDWTKRVNIVKSMAHALSYLHYDCKPS 633
CL + L++E+ME G L LR + A E +++ + MA YL C
Sbjct: 71 CLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMA----YLEEAC--- 123
Query: 634 IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGT---YGYIAPELAYTMAV 690
++HRD V+DFG+ R + D T GT + +PE+
Sbjct: 124 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD--QYTSSTGTKFPVKWASPEVFSFSRY 181
Query: 691 TEKCDVYSFGVVALEVL 707
+ K DV+SFGV+ EV
Sbjct: 182 SSKSDVWSFGVLMWEVF 198
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 94/198 (47%), Gaps = 10/198 (5%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
IG G +G VY+ + ++VA+K + E E +E Q E +LSQ I + +G
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAE--DEIEDIQQEITVLSQCDSPYITRYFG 84
Query: 575 FCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSI 634
L + +++I EY+ GS +L+ L+ T I++ + L YLH + K
Sbjct: 85 SYLKSTKLWIIMEYLGGGSALDLLKPG----PLEETYIATILREILKGLDYLHSERK--- 137
Query: 635 VHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYTMAVTEKC 694
+HRD + +ADFG+A L R VGT ++APE+ A K
Sbjct: 138 IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDFKA 197
Query: 695 DVYSFGVVALEVLMGSHP 712
D++S G+ A+E+ G P
Sbjct: 198 DIWSLGITAIELAKGEPP 215
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 92/197 (46%), Gaps = 18/197 (9%)
Query: 516 IGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGF 575
IG+G +G V+ + VA+K + E F+E EA ++ ++ H +V+LYG
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIE----EAEVMMKLSHPKLVQLYGV 70
Query: 576 CLHNKCMFLIYEYMERGSLFCVLRND--VEAVELDWTKRVNIVKSMAHALSYLHYDCKPS 633
CL + L++E+ME G L LR + A E +++ + MA YL + S
Sbjct: 71 CLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMA----YLE---EAS 123
Query: 634 IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGT---YGYIAPELAYTMAV 690
++HRD V+DFG+ R + D T GT + +PE+
Sbjct: 124 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD--QYTSSTGTKFPVKWASPEVFSFSRY 181
Query: 691 TEKCDVYSFGVVALEVL 707
+ K DV+SFGV+ EV
Sbjct: 182 SSKSDVWSFGVLMWEVF 198
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 91/197 (46%), Gaps = 18/197 (9%)
Query: 516 IGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGF 575
IG+G +G V+ + VA+K + E F+E EA ++ ++ H +V+LYG
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIE----EAEVMMKLSHPKLVQLYGV 73
Query: 576 CLHNKCMFLIYEYMERGSLFCVLRND--VEAVELDWTKRVNIVKSMAHALSYLHYDCKPS 633
CL + L++E+ME G L LR + A E +++ + MA YL C
Sbjct: 74 CLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMA----YLEEAC--- 126
Query: 634 IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGT---YGYIAPELAYTMAV 690
++HRD V+DFG+ R + D T GT + +PE+
Sbjct: 127 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD--QYTSSTGTKFPVKWASPEVFSFSRY 184
Query: 691 TEKCDVYSFGVVALEVL 707
+ K DV+SFGV+ EV
Sbjct: 185 SSKSDVWSFGVLMWEVF 201
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 97/203 (47%), Gaps = 14/203 (6%)
Query: 515 CIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLY 573
+G G +G V + +G+ A+K + + + ++ ES E +LL Q+ H NI+KLY
Sbjct: 33 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 92
Query: 574 GFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPS 633
F +L+ E G LF + + E+D + I++ + ++Y+H K
Sbjct: 93 EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR---IIRQVLSGITYMH---KNK 146
Query: 634 IVHRDXX---XXXXXXXXXXEAFVADFGLARLLHPDSSNRTL-VVGTYGYIAPELAYTMA 689
IVHRD + DFGL+ H ++S + +GT YIAPE+ +
Sbjct: 147 IVHRDLKPENLLLESKSKDANIRIIDFGLS--THFEASKKMKDKIGTAYYIAPEVLHG-T 203
Query: 690 VTEKCDVYSFGVVALEVLMGSHP 712
EKCDV+S GV+ +L G P
Sbjct: 204 YDEKCDVWSTGVILYILLSGCPP 226
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 98/203 (48%), Gaps = 14/203 (6%)
Query: 515 CIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLY 573
+G G +G V + +G+ A+K + + + ++ ES E +LL Q+ H NI+KLY
Sbjct: 57 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 116
Query: 574 GFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPS 633
F +L+ E G LF + + E+D + I++ + ++Y+H K
Sbjct: 117 EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR---IIRQVLSGITYMH---KNK 170
Query: 634 IVHRDXXXXXXXXXXXXEAF---VADFGLARLLHPDSSNRTL-VVGTYGYIAPELAYTMA 689
IVHRD + + DFGL+ H ++S + +GT YIAPE+ +
Sbjct: 171 IVHRDLKPENLLLESKSKDANIRIIDFGLS--THFEASKKMKDKIGTAYYIAPEVLHG-T 227
Query: 690 VTEKCDVYSFGVVALEVLMGSHP 712
EKCDV+S GV+ +L G P
Sbjct: 228 YDEKCDVWSTGVILYILLSGCPP 250
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 91/197 (46%), Gaps = 18/197 (9%)
Query: 516 IGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGF 575
IG+G +G V+ + VA+K + E F+E EA ++ ++ H +V+LYG
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIE----EAEVMMKLSHPKLVQLYGV 68
Query: 576 CLHNKCMFLIYEYMERGSLFCVLRND--VEAVELDWTKRVNIVKSMAHALSYLHYDCKPS 633
CL + L++E+ME G L LR + A E +++ + MA YL C
Sbjct: 69 CLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMA----YLEEAC--- 121
Query: 634 IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGT---YGYIAPELAYTMAV 690
++HRD V+DFG+ R + D T GT + +PE+
Sbjct: 122 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD--QYTSSTGTKFPVKWASPEVFSFSRY 179
Query: 691 TEKCDVYSFGVVALEVL 707
+ K DV+SFGV+ EV
Sbjct: 180 SSKSDVWSFGVLMWEVF 196
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 98/203 (48%), Gaps = 14/203 (6%)
Query: 515 CIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLY 573
+G G +G V + +G+ A+K + + + ++ ES E +LL Q+ H NI+KLY
Sbjct: 56 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 115
Query: 574 GFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPS 633
F +L+ E G LF + + E+D + I++ + ++Y+H K
Sbjct: 116 EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR---IIRQVLSGITYMH---KNK 169
Query: 634 IVHRDXXXXXXXXXXXXEAF---VADFGLARLLHPDSSNRTL-VVGTYGYIAPELAYTMA 689
IVHRD + + DFGL+ H ++S + +GT YIAPE+ +
Sbjct: 170 IVHRDLKPENLLLESKSKDANIRIIDFGLS--THFEASKKMKDKIGTAYYIAPEVLHG-T 226
Query: 690 VTEKCDVYSFGVVALEVLMGSHP 712
EKCDV+S GV+ +L G P
Sbjct: 227 YDEKCDVWSTGVILYILLSGCPP 249
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 99/201 (49%), Gaps = 10/201 (4%)
Query: 508 EDFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHR 567
E ++ +G G +G V+ A + VA+K + +E+F EA ++ ++H
Sbjct: 15 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMS----VEAFLAEANVMKTLQHD 70
Query: 568 NIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLH 627
+VKL+ + + +++I E+M +GSL L++D E + K ++ +A ++++
Sbjct: 71 KLVKLHA-VVTKEPIYIITEFMAKGSLLDFLKSD-EGSKQPLPKLIDFSAQIAEGMAFIE 128
Query: 628 YDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDS-SNRTLVVGTYGYIAPELAY 686
+ + +HRD +ADFGLAR++ + + R + APE
Sbjct: 129 ---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAIN 185
Query: 687 TMAVTEKCDVYSFGVVALEVL 707
+ T K DV+SFG++ +E++
Sbjct: 186 FGSFTIKSDVWSFGILLMEIV 206
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 98/215 (45%), Gaps = 16/215 (7%)
Query: 507 TEDFHIKYCIGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIR 565
++ + + +G GG V+ A+ L + VA+K L +P+F F+ EA+ + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 566 HRNIVKLY----GFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAH 621
H IV +Y +++ EY++ +L ++ + + + + ++
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP---MTPKRAIEVIADACQ 127
Query: 622 ALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNR----TLVVGTY 677
AL++ H + I+HRD V DFG+AR + DS N V+GT
Sbjct: 128 ALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAI-ADSGNSVTQTAAVIGTA 183
Query: 678 GYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHP 712
Y++PE A +V + DVYS G V EVL G P
Sbjct: 184 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 98/202 (48%), Gaps = 14/202 (6%)
Query: 516 IGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
+G G +G V + +G+ A+K + + + ++ ES E +LL Q+ H NI+KLY
Sbjct: 40 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYE 99
Query: 575 FCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSI 634
F +L+ E G LF + + E+D + I++ + ++Y+H K I
Sbjct: 100 FFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR---IIRQVLSGITYMH---KNKI 153
Query: 635 VHRDXXXXXXXXXXXXEAF---VADFGLARLLHPDSSNRTL-VVGTYGYIAPELAYTMAV 690
VHRD + + DFGL+ H ++S + +GT YIAPE+ +
Sbjct: 154 VHRDLKPENLLLESKSKDANIRIIDFGLS--THFEASKKMKDKIGTAYYIAPEVLHG-TY 210
Query: 691 TEKCDVYSFGVVALEVLMGSHP 712
EKCDV+S GV+ +L G P
Sbjct: 211 DEKCDVWSTGVILYILLSGCPP 232
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 98/215 (45%), Gaps = 16/215 (7%)
Query: 507 TEDFHIKYCIGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIR 565
++ + + +G GG V+ A+ L + VA+K L +P+F F+ EA+ + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 566 HRNIVKLY----GFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAH 621
H IV +Y +++ EY++ +L ++ + + + + ++
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP---MTPKRAIEVIADACQ 127
Query: 622 ALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNR----TLVVGTY 677
AL++ H + I+HRD V DFG+AR + DS N V+GT
Sbjct: 128 ALNFSHQN---GIIHRDVKPANILISATNAVKVVDFGIARAI-ADSGNSVXQTAAVIGTA 183
Query: 678 GYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHP 712
Y++PE A +V + DVYS G V EVL G P
Sbjct: 184 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 100/222 (45%), Gaps = 18/222 (8%)
Query: 500 FEEMIEATEDFHIKYCIGTGGYGSVYRAQLS-SGKL---VALKKLHRSETEEPAFLESFQ 555
F + IEA+ I+ IG G +G V +L GK VA+K L TE+ F
Sbjct: 15 FAKEIEAS-CITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQR--RDFL 71
Query: 556 TEARLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVL-RNDVEAVELDWTKRVN 614
EA ++ Q H NI+ L G +K + ++ EYME GSL L +ND + + + V
Sbjct: 72 GEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVI---QLVG 128
Query: 615 IVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVV 674
+++ ++ + YL VHRD V+DFGL+R+L D
Sbjct: 129 MLRGISAGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 185
Query: 675 G---TYGYIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHP 712
G + APE T DV+S+G+V EV+ G P
Sbjct: 186 GGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERP 227
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 98/215 (45%), Gaps = 16/215 (7%)
Query: 507 TEDFHIKYCIGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIR 565
++ + + +G GG V+ A+ L + VA+K L +P+F F+ EA+ + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 566 HRNIVKLY----GFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAH 621
H IV +Y +++ EY++ +L ++ + + + + ++
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP---MTPKRAIEVIADACQ 127
Query: 622 ALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNR----TLVVGTY 677
AL++ H + I+HRD V DFG+AR + DS N V+GT
Sbjct: 128 ALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAI-ADSGNSVTQTAAVIGTA 183
Query: 678 GYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHP 712
Y++PE A +V + DVYS G V EVL G P
Sbjct: 184 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 106/231 (45%), Gaps = 38/231 (16%)
Query: 509 DFHIKYCIGTGGYGSVYRAQ---LSSGK---LVALKKLHRSETEEP--AFLESFQTEARL 560
D +K +G G +G V+ A+ LS K LVA+K L ++P A + FQ EA L
Sbjct: 16 DIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKAL-----KDPTLAARKDFQREAEL 70
Query: 561 LSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLR-NDVEAV------------EL 607
L+ ++H +IVK YG C + +++EYM+ G L LR + +A+ EL
Sbjct: 71 LTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGEL 130
Query: 608 DWTKRVNIVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDS 667
++ ++I +A + YL VHRD + DFG++R ++
Sbjct: 131 GLSQMLHIASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTD 187
Query: 668 SNRTLVVGTYG-----YIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHP 712
R VG + ++ PE T + DV+SFGV+ E+ G P
Sbjct: 188 YYR---VGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQP 235
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 98/202 (48%), Gaps = 14/202 (6%)
Query: 516 IGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGF 575
IG+G +G+VY+ + VA+K L+ + P L++F+ E +L + RH NI+ G+
Sbjct: 20 IGSGSFGTVYKGKWHGD--VAVKMLNVT-APTPQQLQAFKNEVGVLRKTRHVNILLFMGY 76
Query: 576 CLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIV 635
+ + ++ ++ E SL+ L E+ K ++I + A + YLH SI+
Sbjct: 77 STKPQ-LAIVTQWCEGSSLYHHLHASETKFEM--KKLIDIARQTARGMDYLH---AKSII 130
Query: 636 HRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTL--VVGTYGYIAPE---LAYTMAV 690
HRD + DFGLA + S + + G+ ++APE + +
Sbjct: 131 HRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPY 190
Query: 691 TEKCDVYSFGVVALEVLMGSHP 712
+ + DVY+FG+V E++ G P
Sbjct: 191 SFQSDVYAFGIVLYELMTGQLP 212
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 98/202 (48%), Gaps = 14/202 (6%)
Query: 516 IGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGF 575
IG+G +G+VY+ + VA+K L+ + P L++F+ E +L + RH NI+ G+
Sbjct: 16 IGSGSFGTVYKGKWHGD--VAVKMLNVT-APTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 576 CLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIV 635
+ + ++ ++ E SL+ L + + + K ++I + A + YLH SI+
Sbjct: 73 STKPQ-LAIVTQWCEGSSLYHHLH--IIETKFEMIKLIDIARQTAQGMDYLH---AKSII 126
Query: 636 HRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTL--VVGTYGYIAPELAYTM---AV 690
HRD + DFGLA + S + + G+ ++APE+
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 186
Query: 691 TEKCDVYSFGVVALEVLMGSHP 712
+ + DVY+FG+V E++ G P
Sbjct: 187 SFQSDVYAFGIVLYELMTGQLP 208
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 98/202 (48%), Gaps = 14/202 (6%)
Query: 516 IGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGF 575
IG+G +G+VY+ + VA+K L+ + P L++F+ E +L + RH NI+ G+
Sbjct: 21 IGSGSFGTVYKGKWHGD--VAVKMLNVT-APTPQQLQAFKNEVGVLRKTRHVNILLFMGY 77
Query: 576 CLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIV 635
+ + ++ ++ E SL+ L + + + K ++I + A + YLH SI+
Sbjct: 78 STKPQ-LAIVTQWCEGSSLYHHLH--IIETKFEMIKLIDIARQTAQGMDYLH---AKSII 131
Query: 636 HRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTL--VVGTYGYIAPELAYTM---AV 690
HRD + DFGLA + S + + G+ ++APE+
Sbjct: 132 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 191
Query: 691 TEKCDVYSFGVVALEVLMGSHP 712
+ + DVY+FG+V E++ G P
Sbjct: 192 SFQSDVYAFGIVLYELMTGQLP 213
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 98/202 (48%), Gaps = 14/202 (6%)
Query: 516 IGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGF 575
IG+G +G+VY+ + VA+K L+ + P L++F+ E +L + RH NI+ G+
Sbjct: 21 IGSGSFGTVYKGKWHGD--VAVKMLNVT-APTPQQLQAFKNEVGVLRKTRHVNILLFMGY 77
Query: 576 CLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIV 635
+ + ++ ++ E SL+ L + + + K ++I + A + YLH SI+
Sbjct: 78 STKPQ-LAIVTQWCEGSSLYHHLH--IIETKFEMIKLIDIARQTAQGMDYLH---AKSII 131
Query: 636 HRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTL--VVGTYGYIAPELAYTM---AV 690
HRD + DFGLA + S + + G+ ++APE+
Sbjct: 132 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 191
Query: 691 TEKCDVYSFGVVALEVLMGSHP 712
+ + DVY+FG+V E++ G P
Sbjct: 192 SFQSDVYAFGIVLYELMTGQLP 213
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 96/208 (46%), Gaps = 12/208 (5%)
Query: 510 FHIKYCIGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRN 568
F K +G+G +G V+ + SSG +K +++ ++ P +E + E +L + H N
Sbjct: 24 FIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVP--MEQIEAEIEVLKSLDHPN 81
Query: 569 IVKLYGFCLHNKCMFLIYEYMERGSLF-CVLRNDVEAVELDWTKRVNIVKSMAHALSYLH 627
I+K++ M+++ E E G L ++ L ++K M +AL+Y H
Sbjct: 82 IIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH 141
Query: 628 YDCKPSIVHRDXX---XXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPEL 684
+VH+D + DFGLA L D + T GT Y+APE+
Sbjct: 142 ---SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSD-EHSTNAAGTALYMAPEV 197
Query: 685 AYTMAVTEKCDVYSFGVVALEVLMGSHP 712
+ VT KCD++S GVV +L G P
Sbjct: 198 -FKRDVTFKCDIWSAGVVMYFLLTGCLP 224
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 99/225 (44%), Gaps = 21/225 (9%)
Query: 496 GRITFEEMIEAT-EDFHIKYC--IGTGGYGSVYRA-----QLSSGKLVALKKLHRSETEE 547
G + FE+ E+ H+K+ +G G +GSV Q ++G++VA+KKL S TEE
Sbjct: 1 GAMAFEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEE 59
Query: 548 PAFLESFQTEARLLSQIRHRNIVKLYGFCLH--NKCMFLIYEYMERGSLFCVLRNDVEAV 605
L F+ E +L ++H NIVK G C + + LI EY+ GSL L+ E +
Sbjct: 60 --HLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI 117
Query: 606 ELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHP 665
D K + + + YL +HRD + DFGL ++L
Sbjct: 118 --DHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ 172
Query: 666 DSSNRTLVVGTYG---YIAPELAYTMAVTEKCDVYSFGVVALEVL 707
D + + APE + DV+SFGVV E+
Sbjct: 173 DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 217
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 98/202 (48%), Gaps = 14/202 (6%)
Query: 516 IGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGF 575
IG+G +G+VY+ + VA+K L+ + P L++F+ E +L + RH NI+ G+
Sbjct: 43 IGSGSFGTVYKGKWHGD--VAVKMLNVT-APTPQQLQAFKNEVGVLRKTRHVNILLFMGY 99
Query: 576 CLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIV 635
+ + ++ ++ E SL+ L + + + K ++I + A + YLH SI+
Sbjct: 100 STKPQ-LAIVTQWCEGSSLYHHLH--IIETKFEMIKLIDIARQTAQGMDYLH---AKSII 153
Query: 636 HRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTL--VVGTYGYIAPELAYTM---AV 690
HRD + DFGLA + S + + G+ ++APE+
Sbjct: 154 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 213
Query: 691 TEKCDVYSFGVVALEVLMGSHP 712
+ + DVY+FG+V E++ G P
Sbjct: 214 SFQSDVYAFGIVLYELMTGQLP 235
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 94/212 (44%), Gaps = 20/212 (9%)
Query: 508 EDFHIKYC--IGTGGYGSVYRA-----QLSSGKLVALKKLHRSETEEPAFLESFQTEARL 560
E+ H+K+ +G G +GSV Q ++G++VA+KKL S TEE L F+ E +
Sbjct: 26 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEE--HLRDFEREIEI 82
Query: 561 LSQIRHRNIVKLYGFCLH--NKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKS 618
L ++H NIVK G C + + LI EY+ GSL L+ E + D K +
Sbjct: 83 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQ 140
Query: 619 MAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYG 678
+ + YL +HRD + DFGL ++L D +
Sbjct: 141 ICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 197
Query: 679 ---YIAPELAYTMAVTEKCDVYSFGVVALEVL 707
+ APE + DV+SFGVV E+
Sbjct: 198 PIFWYAPESLTESKFSVASDVWSFGVVLYELF 229
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 98/202 (48%), Gaps = 14/202 (6%)
Query: 516 IGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGF 575
IG+G +G+VY+ + VA+K L+ + P L++F+ E +L + RH NI+ G+
Sbjct: 18 IGSGSFGTVYKGKWHGD--VAVKMLNVT-APTPQQLQAFKNEVGVLRKTRHVNILLFMGY 74
Query: 576 CLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIV 635
+ + ++ ++ E SL+ L + + + K ++I + A + YLH SI+
Sbjct: 75 STKPQ-LAIVTQWCEGSSLYHHLH--IIETKFEMIKLIDIARQTAQGMDYLH---AKSII 128
Query: 636 HRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTL--VVGTYGYIAPELAYTM---AV 690
HRD + DFGLA + S + + G+ ++APE+
Sbjct: 129 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 188
Query: 691 TEKCDVYSFGVVALEVLMGSHP 712
+ + DVY+FG+V E++ G P
Sbjct: 189 SFQSDVYAFGIVLYELMTGQLP 210
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 94/212 (44%), Gaps = 20/212 (9%)
Query: 508 EDFHIKYC--IGTGGYGSVYRA-----QLSSGKLVALKKLHRSETEEPAFLESFQTEARL 560
E+ H+K+ +G G +GSV Q ++G++VA+KKL S TEE L F+ E +
Sbjct: 26 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEE--HLRDFEREIEI 82
Query: 561 LSQIRHRNIVKLYGFCLH--NKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKS 618
L ++H NIVK G C + + LI EY+ GSL L+ E + D K +
Sbjct: 83 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQ 140
Query: 619 MAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYG 678
+ + YL +HRD + DFGL ++L D +
Sbjct: 141 ICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 197
Query: 679 ---YIAPELAYTMAVTEKCDVYSFGVVALEVL 707
+ APE + DV+SFGVV E+
Sbjct: 198 PIFWYAPESLTESKFSVASDVWSFGVVLYELF 229
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 91/202 (45%), Gaps = 13/202 (6%)
Query: 516 IGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGF 575
+GTG +G V + VA+K + E F+E EA+++ + H +V+LYG
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIE----EAKVMMNLSHEKLVQLYGV 72
Query: 576 CLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIV 635
C + +F+I EYM G L LR + + + + K + A+ YL +
Sbjct: 73 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQ--QLLEMCKDVCEAMEYLE---SKQFL 127
Query: 636 HRDXXXXXXXXXXXXEAFVADFGLARLLHPD--SSNRTLVVGTYGYIAPELAYTMAVTEK 693
HRD V+DFGL+R + D +S+R + PE+ + K
Sbjct: 128 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPV-RWSPPEVLMYSKFSSK 186
Query: 694 CDVYSFGVVALEVL-MGSHPTD 714
D+++FGV+ E+ +G P +
Sbjct: 187 SDIWAFGVLMWEIYSLGKMPYE 208
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 98/202 (48%), Gaps = 14/202 (6%)
Query: 516 IGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGF 575
IG+G +G+VY+ + VA+K L+ + P L++F+ E +L + RH NI+ G+
Sbjct: 44 IGSGSFGTVYKGKWHGD--VAVKMLNVT-APTPQQLQAFKNEVGVLRKTRHVNILLFMGY 100
Query: 576 CLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIV 635
+ + ++ ++ E SL+ L + + + K ++I + A + YLH SI+
Sbjct: 101 STKPQ-LAIVTQWCEGSSLYHHLH--IIETKFEMIKLIDIARQTAQGMDYLH---AKSII 154
Query: 636 HRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTL--VVGTYGYIAPELAYTM---AV 690
HRD + DFGLA + S + + G+ ++APE+
Sbjct: 155 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 214
Query: 691 TEKCDVYSFGVVALEVLMGSHP 712
+ + DVY+FG+V E++ G P
Sbjct: 215 SFQSDVYAFGIVLYELMTGQLP 236
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 99/201 (49%), Gaps = 10/201 (4%)
Query: 508 EDFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHR 567
E ++ +G G +G V+ A + VA+K + +E+F EA ++ ++H
Sbjct: 188 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMS----VEAFLAEANVMKTLQHD 243
Query: 568 NIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLH 627
+VKL+ + + +++I E+M +GSL L++D E + K ++ +A ++++
Sbjct: 244 KLVKLHA-VVTKEPIYIITEFMAKGSLLDFLKSD-EGSKQPLPKLIDFSAQIAEGMAFIE 301
Query: 628 YDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDS-SNRTLVVGTYGYIAPELAY 686
+ + +HRD +ADFGLAR++ + + R + APE
Sbjct: 302 ---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAIN 358
Query: 687 TMAVTEKCDVYSFGVVALEVL 707
+ T K DV+SFG++ +E++
Sbjct: 359 FGSFTIKSDVWSFGILLMEIV 379
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 94/212 (44%), Gaps = 20/212 (9%)
Query: 508 EDFHIKYC--IGTGGYGSVYRA-----QLSSGKLVALKKLHRSETEEPAFLESFQTEARL 560
E+ H+K+ +G G +GSV Q ++G++VA+KKL S TEE L F+ E +
Sbjct: 12 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEE--HLRDFEREIEI 68
Query: 561 LSQIRHRNIVKLYGFCLH--NKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKS 618
L ++H NIVK G C + + LI EY+ GSL L+ E + D K +
Sbjct: 69 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQ 126
Query: 619 MAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYG 678
+ + YL +HRD + DFGL ++L D +
Sbjct: 127 ICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 183
Query: 679 ---YIAPELAYTMAVTEKCDVYSFGVVALEVL 707
+ APE + DV+SFGVV E+
Sbjct: 184 PIFWYAPESLTESKFSVASDVWSFGVVLYELF 215
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 94/212 (44%), Gaps = 20/212 (9%)
Query: 508 EDFHIKYC--IGTGGYGSVYRA-----QLSSGKLVALKKLHRSETEEPAFLESFQTEARL 560
E+ H+K+ +G G +GSV Q ++G++VA+KKL S TEE L F+ E +
Sbjct: 11 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEE--HLRDFEREIEI 67
Query: 561 LSQIRHRNIVKLYGFCLH--NKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKS 618
L ++H NIVK G C + + LI EY+ GSL L+ E + D K +
Sbjct: 68 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQ 125
Query: 619 MAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYG 678
+ + YL +HRD + DFGL ++L D +
Sbjct: 126 ICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 182
Query: 679 ---YIAPELAYTMAVTEKCDVYSFGVVALEVL 707
+ APE + DV+SFGVV E+
Sbjct: 183 PIFWYAPESLTESKFSVASDVWSFGVVLYELF 214
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 94/212 (44%), Gaps = 20/212 (9%)
Query: 508 EDFHIKYC--IGTGGYGSVYRA-----QLSSGKLVALKKLHRSETEEPAFLESFQTEARL 560
E+ H+K+ +G G +GSV Q ++G++VA+KKL S TEE L F+ E +
Sbjct: 8 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEE--HLRDFEREIEI 64
Query: 561 LSQIRHRNIVKLYGFCLH--NKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKS 618
L ++H NIVK G C + + LI EY+ GSL L+ E + D K +
Sbjct: 65 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQ 122
Query: 619 MAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYG 678
+ + YL +HRD + DFGL ++L D +
Sbjct: 123 ICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 179
Query: 679 ---YIAPELAYTMAVTEKCDVYSFGVVALEVL 707
+ APE + DV+SFGVV E+
Sbjct: 180 PIFWYAPESLTESKFSVASDVWSFGVVLYELF 211
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 98/202 (48%), Gaps = 14/202 (6%)
Query: 516 IGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGF 575
IG+G +G+VY+ + VA+K L+ + P L++F+ E +L + RH NI+ G+
Sbjct: 16 IGSGSFGTVYKGKWHGD--VAVKMLNVT-APTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 576 CLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIV 635
+ + ++ ++ E SL+ L + + + K ++I + A + YLH SI+
Sbjct: 73 STAPQ-LAIVTQWCEGSSLYHHLH--IIETKFEMIKLIDIARQTAQGMDYLH---AKSII 126
Query: 636 HRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTL--VVGTYGYIAPELAYTM---AV 690
HRD + DFGLA + S + + G+ ++APE+
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 186
Query: 691 TEKCDVYSFGVVALEVLMGSHP 712
+ + DVY+FG+V E++ G P
Sbjct: 187 SFQSDVYAFGIVLYELMTGQLP 208
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 94/212 (44%), Gaps = 20/212 (9%)
Query: 508 EDFHIKYC--IGTGGYGSVYRA-----QLSSGKLVALKKLHRSETEEPAFLESFQTEARL 560
E+ H+K+ +G G +GSV Q ++G++VA+KKL S TEE L F+ E +
Sbjct: 39 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEE--HLRDFEREIEI 95
Query: 561 LSQIRHRNIVKLYGFCLH--NKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKS 618
L ++H NIVK G C + + LI EY+ GSL L+ E + D K +
Sbjct: 96 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQ 153
Query: 619 MAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYG 678
+ + YL +HRD + DFGL ++L D +
Sbjct: 154 ICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 210
Query: 679 ---YIAPELAYTMAVTEKCDVYSFGVVALEVL 707
+ APE + DV+SFGVV E+
Sbjct: 211 PIFWYAPESLTESKFSVASDVWSFGVVLYELF 242
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 94/212 (44%), Gaps = 20/212 (9%)
Query: 508 EDFHIKYC--IGTGGYGSVYRA-----QLSSGKLVALKKLHRSETEEPAFLESFQTEARL 560
E+ H+K+ +G G +GSV Q ++G++VA+KKL S TEE L F+ E +
Sbjct: 7 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEE--HLRDFEREIEI 63
Query: 561 LSQIRHRNIVKLYGFCLH--NKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKS 618
L ++H NIVK G C + + LI EY+ GSL L+ E + D K +
Sbjct: 64 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQ 121
Query: 619 MAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYG 678
+ + YL +HRD + DFGL ++L D +
Sbjct: 122 ICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 178
Query: 679 ---YIAPELAYTMAVTEKCDVYSFGVVALEVL 707
+ APE + DV+SFGVV E+
Sbjct: 179 PIFWYAPESLTESKFSVASDVWSFGVVLYELF 210
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 94/212 (44%), Gaps = 20/212 (9%)
Query: 508 EDFHIKYC--IGTGGYGSVYRA-----QLSSGKLVALKKLHRSETEEPAFLESFQTEARL 560
E+ H+K+ +G G +GSV Q ++G++VA+KKL S TEE L F+ E +
Sbjct: 6 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEE--HLRDFEREIEI 62
Query: 561 LSQIRHRNIVKLYGFCLH--NKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKS 618
L ++H NIVK G C + + LI EY+ GSL L+ E + D K +
Sbjct: 63 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQ 120
Query: 619 MAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYG 678
+ + YL +HRD + DFGL ++L D +
Sbjct: 121 ICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 177
Query: 679 ---YIAPELAYTMAVTEKCDVYSFGVVALEVL 707
+ APE + DV+SFGVV E+
Sbjct: 178 PIFWYAPESLTESKFSVASDVWSFGVVLYELF 209
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 94/212 (44%), Gaps = 20/212 (9%)
Query: 508 EDFHIKYC--IGTGGYGSVYRA-----QLSSGKLVALKKLHRSETEEPAFLESFQTEARL 560
E+ H+K+ +G G +GSV Q ++G++VA+KKL S TEE L F+ E +
Sbjct: 13 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEE--HLRDFEREIEI 69
Query: 561 LSQIRHRNIVKLYGFCLH--NKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKS 618
L ++H NIVK G C + + LI EY+ GSL L+ E + D K +
Sbjct: 70 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQ 127
Query: 619 MAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYG 678
+ + YL +HRD + DFGL ++L D +
Sbjct: 128 ICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 184
Query: 679 ---YIAPELAYTMAVTEKCDVYSFGVVALEVL 707
+ APE + DV+SFGVV E+
Sbjct: 185 PIFWYAPESLTESKFSVASDVWSFGVVLYELF 216
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 98/215 (45%), Gaps = 16/215 (7%)
Query: 507 TEDFHIKYCIGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIR 565
++ + + +G GG V+ A+ L + VA+K L +P+F F+ EA+ + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 566 HRNIVKLYGFCLHNKCM----FLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAH 621
H IV +Y +++ EY++ +L ++ + + + + ++
Sbjct: 71 HPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP---MTPKRAIEVIADACQ 127
Query: 622 ALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNR----TLVVGTY 677
AL++ H + I+HRD V DFG+AR + DS N V+GT
Sbjct: 128 ALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAI-ADSGNSVTQTAAVIGTA 183
Query: 678 GYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHP 712
Y++PE A +V + DVYS G V EVL G P
Sbjct: 184 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 94/212 (44%), Gaps = 20/212 (9%)
Query: 508 EDFHIKYC--IGTGGYGSVYRA-----QLSSGKLVALKKLHRSETEEPAFLESFQTEARL 560
E+ H+K+ +G G +GSV Q ++G++VA+KKL S TEE L F+ E +
Sbjct: 15 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEE--HLRDFEREIEI 71
Query: 561 LSQIRHRNIVKLYGFCLH--NKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKS 618
L ++H NIVK G C + + LI EY+ GSL L+ E + D K +
Sbjct: 72 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQ 129
Query: 619 MAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYG 678
+ + YL +HRD + DFGL ++L D +
Sbjct: 130 ICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 186
Query: 679 ---YIAPELAYTMAVTEKCDVYSFGVVALEVL 707
+ APE + DV+SFGVV E+
Sbjct: 187 PIFWYAPESLTESKFSVASDVWSFGVVLYELF 218
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 94/212 (44%), Gaps = 20/212 (9%)
Query: 508 EDFHIKYC--IGTGGYGSVYRA-----QLSSGKLVALKKLHRSETEEPAFLESFQTEARL 560
E+ H+K+ +G G +GSV Q ++G++VA+KKL S TEE L F+ E +
Sbjct: 8 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEE--HLRDFEREIEI 64
Query: 561 LSQIRHRNIVKLYGFCLH--NKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKS 618
L ++H NIVK G C + + LI EY+ GSL L+ E + D K +
Sbjct: 65 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQ 122
Query: 619 MAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYG 678
+ + YL +HRD + DFGL ++L D +
Sbjct: 123 ICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 179
Query: 679 ---YIAPELAYTMAVTEKCDVYSFGVVALEVL 707
+ APE + DV+SFGVV E+
Sbjct: 180 PIFWYAPESLTESKFSVASDVWSFGVVLYELF 211
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 94/212 (44%), Gaps = 20/212 (9%)
Query: 508 EDFHIKYC--IGTGGYGSVYRA-----QLSSGKLVALKKLHRSETEEPAFLESFQTEARL 560
E+ H+K+ +G G +GSV Q ++G++VA+KKL S TEE L F+ E +
Sbjct: 11 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEE--HLRDFEREIEI 67
Query: 561 LSQIRHRNIVKLYGFCLH--NKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKS 618
L ++H NIVK G C + + LI EY+ GSL L+ E + D K +
Sbjct: 68 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERI--DHIKLLQYTSQ 125
Query: 619 MAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYG 678
+ + YL +HRD + DFGL ++L D +
Sbjct: 126 ICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 182
Query: 679 ---YIAPELAYTMAVTEKCDVYSFGVVALEVL 707
+ APE + DV+SFGVV E+
Sbjct: 183 PIFWYAPESLTESKFSVASDVWSFGVVLYELF 214
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 103/220 (46%), Gaps = 29/220 (13%)
Query: 510 FHIKYCIGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQI-RHR 567
F + +G G YG VY+ + + +G+L A+K + + EE E + E +L + HR
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEE----EEIKQEINMLKKYSHHR 81
Query: 568 NIVKLYGFCLH------NKCMFLIYEYMERGSLFCVLRNDV-EAVELDWTKRVNIVKSMA 620
NI YG + + ++L+ E+ GS+ +++N ++ +W I + +
Sbjct: 82 NIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWI--AYICREIL 139
Query: 621 HALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYI 680
LS+LH + ++HRD E + DFG++ L R +GT ++
Sbjct: 140 RGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWM 196
Query: 681 APELAYTMAVTE--------KCDVYSFGVVALEVLMGSHP 712
APE+ +A E K D++S G+ A+E+ G+ P
Sbjct: 197 APEV---IACDENPDATYDFKSDLWSLGITAIEMAEGAPP 233
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 103/228 (45%), Gaps = 38/228 (16%)
Query: 509 DFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHR 567
DF +G G +G V +A+ + + A+KK+ +E + L + +E LL+ + H+
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEK----LSTILSEVMLLASLNHQ 62
Query: 568 NIVKLYGFCLHNK-------------CMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVN 614
+V+ Y L + +F+ EY E G+L+ ++ ++ + D R
Sbjct: 63 YVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWR-- 120
Query: 615 IVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLH---------- 664
+ + + ALSY+H I+HRD + DFGLA+ +H
Sbjct: 121 LFRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDS 177
Query: 665 ---PDSS-NRTLVVGTYGYIAPE-LAYTMAVTEKCDVYSFGVVALEVL 707
P SS N T +GT Y+A E L T EK D+YS G++ E++
Sbjct: 178 QNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 90/209 (43%), Gaps = 15/209 (7%)
Query: 512 IKYCIGTGGYGSVYRAQLS-SGK---LVALKKLHRSETEEPAFLESFQTEARLLSQIRHR 567
I+ IG G +G V +L GK VA+K L TE+ F EA ++ Q H
Sbjct: 47 IERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQR--RDFLCEASIMGQFDHP 104
Query: 568 NIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLH 627
N+V L G K + ++ E+ME G+L LR + + V +++ +A + YL
Sbjct: 105 NVVHLEGVVTRGKPVMIVIEFMENGALDAFLRK--HDGQFTVIQLVGMLRGIAAGMRYL- 161
Query: 628 YDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVG---TYGYIAPEL 684
VHRD V+DFGL+R++ D G + APE
Sbjct: 162 --ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEA 219
Query: 685 AYTMAVTEKCDVYSFGVVALEVL-MGSHP 712
T DV+S+G+V EV+ G P
Sbjct: 220 IQYRKFTSASDVWSYGIVMWEVMSYGERP 248
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 98/215 (45%), Gaps = 16/215 (7%)
Query: 507 TEDFHIKYCIGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIR 565
++ + + +G GG V+ A+ L + VA+K L +P+F F+ EA+ + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 566 HRNIVKLY----GFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAH 621
H IV +Y +++ EY++ +L ++ + + + + ++
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP---MTPKRAIEVIADACQ 127
Query: 622 ALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNR----TLVVGTY 677
AL++ H + I+HRD V DFG+AR + DS N V+GT
Sbjct: 128 ALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAI-ADSGNSVTQTAAVIGTA 183
Query: 678 GYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHP 712
Y++PE A +V + DVYS G V EVL G P
Sbjct: 184 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 97/202 (48%), Gaps = 14/202 (6%)
Query: 516 IGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGF 575
IG+G +G+VY+ + VA+K L+ + P L++F+ E +L + RH NI+ G+
Sbjct: 32 IGSGSFGTVYKGKWHGD--VAVKMLNVT-APTPQQLQAFKNEVGVLRKTRHVNILLFMGY 88
Query: 576 CLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIV 635
+ + ++ ++ E SL+ L E+ K ++I + A + YLH SI+
Sbjct: 89 STKPQ-LAIVTQWCEGSSLYHHLHASETKFEM--KKLIDIARQTARGMDYLH---AKSII 142
Query: 636 HRDXXXXXXXXXXXXEAFVADFGLA--RLLHPDSSNRTLVVGTYGYIAPE---LAYTMAV 690
HRD + DFGLA + S + G+ ++APE + +
Sbjct: 143 HRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPY 202
Query: 691 TEKCDVYSFGVVALEVLMGSHP 712
+ + DVY+FG+V E++ G P
Sbjct: 203 SFQSDVYAFGIVLYELMTGQLP 224
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 95/214 (44%), Gaps = 24/214 (11%)
Query: 508 EDFHIKYC--IGTGGYGSVYRA-----QLSSGKLVALKKLHRSETEEPAFLESFQTEARL 560
E+ H+K+ +G G +GSV Q ++G++VA+KKL S TEE L F+ E +
Sbjct: 8 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEE--HLRDFEREIEI 64
Query: 561 LSQIRHRNIVKLYGFCLH--NKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKS 618
L ++H NIVK G C + + LI EY+ GSL L+ E + D K +
Sbjct: 65 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQ 122
Query: 619 MAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYG 678
+ + YL +HRD + DFGL ++L D V G
Sbjct: 123 ICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE--FFKVKEPG 177
Query: 679 -----YIAPELAYTMAVTEKCDVYSFGVVALEVL 707
+ APE + DV+SFGVV E+
Sbjct: 178 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 211
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 96/203 (47%), Gaps = 14/203 (6%)
Query: 515 CIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLY 573
+G G +G V + +G+ A+K + + + ++ ES E +LL Q+ H NI KLY
Sbjct: 33 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLY 92
Query: 574 GFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPS 633
F +L+ E G LF + + E+D + I++ + ++Y H K
Sbjct: 93 EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR---IIRQVLSGITYXH---KNK 146
Query: 634 IVHRDXXXXXXXXXXXXEAF---VADFGLARLLHPDSSNRTL-VVGTYGYIAPELAYTMA 689
IVHRD + + DFGL+ H ++S + +GT YIAPE+ +
Sbjct: 147 IVHRDLKPENLLLESKSKDANIRIIDFGLS--THFEASKKXKDKIGTAYYIAPEVLHG-T 203
Query: 690 VTEKCDVYSFGVVALEVLMGSHP 712
EKCDV+S GV+ +L G P
Sbjct: 204 YDEKCDVWSTGVILYILLSGCPP 226
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 90/197 (45%), Gaps = 18/197 (9%)
Query: 516 IGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGF 575
IG+G +G V+ + VA+K + E F+E EA ++ ++ H +V+LYG
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIE----EAEVMMKLSHPKLVQLYGV 71
Query: 576 CLHNKCMFLIYEYMERGSLFCVLRND--VEAVELDWTKRVNIVKSMAHALSYLHYDCKPS 633
CL + L+ E+ME G L LR + A E +++ + MA YL C
Sbjct: 72 CLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMA----YLEEAC--- 124
Query: 634 IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGT---YGYIAPELAYTMAV 690
++HRD V+DFG+ R + D T GT + +PE+
Sbjct: 125 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD--QYTSSTGTKFPVKWASPEVFSFSRY 182
Query: 691 TEKCDVYSFGVVALEVL 707
+ K DV+SFGV+ EV
Sbjct: 183 SSKSDVWSFGVLMWEVF 199
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 99/223 (44%), Gaps = 31/223 (13%)
Query: 512 IKYCIGTGGYGSVYRAQL------SSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIR 565
+K +G G +G V+ A+ LVA+K L + + F EA LL+ ++
Sbjct: 17 LKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNAR---KDFHREAELLTNLQ 73
Query: 566 HRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLR-NDVEAV---------ELDWTKRVNI 615
H +IVK YG C+ + +++EYM+ G L LR + +AV EL ++ ++I
Sbjct: 74 HEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHI 133
Query: 616 VKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVG 675
+ +A + YL VHRD + DFG++R ++ R VG
Sbjct: 134 AQQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYR---VG 187
Query: 676 TYG-----YIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHP 712
+ ++ PE T + DV+S GVV E+ G P
Sbjct: 188 GHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQP 230
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 100/207 (48%), Gaps = 17/207 (8%)
Query: 509 DFHIKYCIGTGGYGSVYRA-QLSSGKLVALK--KLHRSETEEPAFLESFQTEARLLSQIR 565
D ++K IG G G V A + SG+ VA+K L + + E F E ++ +
Sbjct: 48 DSYVK--IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLF-----NEVVIMRDYQ 100
Query: 566 HRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSY 625
H N+V++Y L + ++++ E+++ G+L + V V L+ + + +++ AL+Y
Sbjct: 101 HFNVVEMYKSYLVGEELWVLMEFLQGGALTDI----VSQVRLNEEQIATVCEAVLQALAY 156
Query: 626 LHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELA 685
LH ++HRD ++DFG + D R +VGT ++APE+
Sbjct: 157 LHAQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVI 213
Query: 686 YTMAVTEKCDVYSFGVVALEVLMGSHP 712
+ D++S G++ +E++ G P
Sbjct: 214 SRSLYATEVDIWSLGIMVIEMVDGEPP 240
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 97/202 (48%), Gaps = 14/202 (6%)
Query: 516 IGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGF 575
IG+G +G+VY+ + VA+K L+ + P L++F+ E +L + RH NI+ G+
Sbjct: 16 IGSGSFGTVYKGKWHGD--VAVKMLNVT-APTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 576 CLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIV 635
+ + ++ ++ E SL+ L + + + K ++I + A + YLH SI+
Sbjct: 73 STKPQ-LAIVTQWCEGSSLYHHLH--IIETKFEMIKLIDIARQTAQGMDYLH---AKSII 126
Query: 636 HRDXXXXXXXXXXXXEAFVADFGLA--RLLHPDSSNRTLVVGTYGYIAPELAYTM---AV 690
HRD + DFGLA + S + G+ ++APE+
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 186
Query: 691 TEKCDVYSFGVVALEVLMGSHP 712
+ + DVY+FG+V E++ G P
Sbjct: 187 SFQSDVYAFGIVLYELMTGQLP 208
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 98/215 (45%), Gaps = 16/215 (7%)
Query: 507 TEDFHIKYCIGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIR 565
++ + + +G GG V+ A+ L + VA+K L +P+F F+ EA+ + +
Sbjct: 28 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 87
Query: 566 HRNIVKLY----GFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAH 621
H IV +Y +++ EY++ +L D+ E T + ++ +A
Sbjct: 88 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTL-----RDIVHTEGPMTPK-RAIEVIAD 141
Query: 622 ALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNR----TLVVGTY 677
A L++ + I+HRD V DFG+AR + DS N V+GT
Sbjct: 142 ACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAI-ADSGNSVTQTAAVIGTA 200
Query: 678 GYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHP 712
Y++PE A +V + DVYS G V EVL G P
Sbjct: 201 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 235
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 97/202 (48%), Gaps = 14/202 (6%)
Query: 516 IGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGF 575
IG+G +G+VY+ + VA+K L+ + P L++F+ E +L + RH NI+ G+
Sbjct: 44 IGSGSFGTVYKGKWHGD--VAVKMLNVT-APTPQQLQAFKNEVGVLRKTRHVNILLFMGY 100
Query: 576 CLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIV 635
+ + ++ ++ E SL+ L + + + K ++I + A + YLH SI+
Sbjct: 101 STKPQ-LAIVTQWCEGSSLYHHLH--IIETKFEMIKLIDIARQTAQGMDYLH---AKSII 154
Query: 636 HRDXXXXXXXXXXXXEAFVADFGLA--RLLHPDSSNRTLVVGTYGYIAPELAYTM---AV 690
HRD + DFGLA + S + G+ ++APE+
Sbjct: 155 HRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 214
Query: 691 TEKCDVYSFGVVALEVLMGSHP 712
+ + DVY+FG+V E++ G P
Sbjct: 215 SFQSDVYAFGIVLYELMTGQLP 236
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 97/202 (48%), Gaps = 14/202 (6%)
Query: 516 IGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGF 575
IG+G +G+VY+ + VA+K L+ + P L++F+ E +L + RH NI+ G+
Sbjct: 36 IGSGSFGTVYKGKWHGD--VAVKMLNVT-APTPQQLQAFKNEVGVLRKTRHVNILLFMGY 92
Query: 576 CLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIV 635
+ + ++ ++ E SL+ L + + + K ++I + A + YLH SI+
Sbjct: 93 STKPQ-LAIVTQWCEGSSLYHHLH--IIETKFEMIKLIDIARQTAQGMDYLH---AKSII 146
Query: 636 HRDXXXXXXXXXXXXEAFVADFGLA--RLLHPDSSNRTLVVGTYGYIAPELAYTM---AV 690
HRD + DFGLA + S + G+ ++APE+
Sbjct: 147 HRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 206
Query: 691 TEKCDVYSFGVVALEVLMGSHP 712
+ + DVY+FG+V E++ G P
Sbjct: 207 SFQSDVYAFGIVLYELMTGQLP 228
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 96/225 (42%), Gaps = 36/225 (16%)
Query: 516 IGTGGYGSVYRAQL--------SSGKLVALKKLHRSETEEPAFLESFQTEARLLSQI-RH 566
+G G +G V A+ VA+K L TEE L +E ++ I +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEED--LSDLVSEMEMMKMIGKH 100
Query: 567 RNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLR-------------NDVEAVELDWTKRV 613
+NI+ L G C + +++I EY +G+L LR N V ++ + V
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 614 NIVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLL-----HPDSS 668
+ +A + YL +HRD +ADFGLAR + + ++
Sbjct: 161 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 669 NRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHP 712
N L V ++APE + T + DV+SFGV+ E+ +G P
Sbjct: 218 NGRLPV---KWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 97/202 (48%), Gaps = 14/202 (6%)
Query: 516 IGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGF 575
IG+G +G+VY+ + VA+K L+ + P L++F+ E +L + RH NI+ G+
Sbjct: 32 IGSGSFGTVYKGKWHGD--VAVKMLNVT-APTPQQLQAFKNEVGVLRKTRHVNILLFMGY 88
Query: 576 CLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIV 635
+ + ++ ++ E SL+ L E+ K ++I + A + YLH SI+
Sbjct: 89 STAPQ-LAIVTQWCEGSSLYHHLHASETKFEM--KKLIDIARQTARGMDYLH---AKSII 142
Query: 636 HRDXXXXXXXXXXXXEAFVADFGLA--RLLHPDSSNRTLVVGTYGYIAPE---LAYTMAV 690
HRD + DFGLA + S + G+ ++APE + +
Sbjct: 143 HRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPY 202
Query: 691 TEKCDVYSFGVVALEVLMGSHP 712
+ + DVY+FG+V E++ G P
Sbjct: 203 SFQSDVYAFGIVLYELMTGQLP 224
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 89/192 (46%), Gaps = 14/192 (7%)
Query: 516 IGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGF 575
IG G +G V K VA+K + T + +F EA +++Q+RH N+V+L G
Sbjct: 20 IGKGEFGDVMLGDYRGNK-VAVKCIKNDATAQ-----AFLAEASVMTQLRHSNLVQLLGV 73
Query: 576 CLHNK-CMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSI 634
+ K ++++ EYM +GSL LR+ +V L + + A+ YL + +
Sbjct: 74 IVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEGN---NF 129
Query: 635 VHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYTMAVTEKC 694
VHRD A V+DFGL + L V + APE A + K
Sbjct: 130 VHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPV---KWTAPEALREAAFSTKS 186
Query: 695 DVYSFGVVALEV 706
DV+SFG++ E+
Sbjct: 187 DVWSFGILLWEI 198
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 108/224 (48%), Gaps = 24/224 (10%)
Query: 506 ATEDFHIKY----CIGTGGYGSVYRA-QLSSGKLVALKKLH-RSETEEPAFLESFQT--- 556
A ++F+ KY IG G V R ++G A+K + +E P LE +
Sbjct: 88 AAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATR 147
Query: 557 -EARLLSQIR-HRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVN 614
E +L Q+ H +I+ L + MFL+++ M +G LF L E V L + +
Sbjct: 148 RETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYL---TEKVALSEKETRS 204
Query: 615 IVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVV 674
I++S+ A+S+LH + +IVHRD + ++DFG + L P R L
Sbjct: 205 IMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLREL-C 260
Query: 675 GTYGYIAPE-LAYTMAVT-----EKCDVYSFGVVALEVLMGSHP 712
GT GY+APE L +M T ++ D+++ GV+ +L GS P
Sbjct: 261 GTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPP 304
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 94/212 (44%), Gaps = 20/212 (9%)
Query: 508 EDFHIKYC--IGTGGYGSVYRA-----QLSSGKLVALKKLHRSETEEPAFLESFQTEARL 560
E+ H+K+ +G G +GSV Q ++G++VA+KKL S TEE L F+ E +
Sbjct: 11 EERHLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEE--HLRDFEREIEI 67
Query: 561 LSQIRHRNIVKLYGFCLH--NKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKS 618
L ++H NIVK G C + + LI E++ GSL L+ E + D K +
Sbjct: 68 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERI--DHIKLLQYTSQ 125
Query: 619 MAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYG 678
+ + YL +HRD + DFGL ++L D +
Sbjct: 126 ICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 182
Query: 679 ---YIAPELAYTMAVTEKCDVYSFGVVALEVL 707
+ APE + DV+SFGVV E+
Sbjct: 183 PIFWYAPESLTESKFSVASDVWSFGVVLYELF 214
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 97/225 (43%), Gaps = 36/225 (16%)
Query: 516 IGTGGYGSVYRAQL--------SSGKLVALKKLHRSETEEPAFLESFQTEARLLSQI-RH 566
+G G +G V A+ VA+K L TE+ L +E ++ I +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD--LSDLVSEMEMMKMIGKH 100
Query: 567 RNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLR-------------NDVEAVELDWTKRV 613
+NI+ L G C + +++I EY +G+L LR N V ++ + V
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 614 NIVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLL-----HPDSS 668
+ +A + YL +HRD +ADFGLAR + + +++
Sbjct: 161 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTT 217
Query: 669 NRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHP 712
N L V ++APE + T + DV+SFGV+ E+ +G P
Sbjct: 218 NGRLPV---KWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 103/214 (48%), Gaps = 15/214 (7%)
Query: 504 IEATEDFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQ 563
IEA+E + IG+G +G+VY+ + VA+K L + P ++F+ E +L +
Sbjct: 33 IEASE-VMLSTRIGSGSFGTVYKGKWHGD--VAVKIL-KVVDPTPEQFQAFRNEVAVLRK 88
Query: 564 IRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHAL 623
RH NI+ G+ + + ++ ++ E SL+ L V+ + + ++I + A +
Sbjct: 89 TRHVNILLFMGYMTKDN-LAIVTQWCEGSSLYKHLH--VQETKFQMFQLIDIARQTAQGM 145
Query: 624 SYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLV--VGTYGYIA 681
YLH +I+HRD + DFGLA + S ++ + G+ ++A
Sbjct: 146 DYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMA 202
Query: 682 PELAYTM---AVTEKCDVYSFGVVALEVLMGSHP 712
PE+ + + DVYS+G+V E++ G P
Sbjct: 203 PEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELP 236
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 93/222 (41%), Gaps = 30/222 (13%)
Query: 516 IGTGGYGSVYRAQL--------SSGKLVALKKLHRSETEEPAFLESFQTEARLLSQI-RH 566
+G G +G V A+ VA+K L TE+ L +E ++ I +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD--LSDLVSEMEMMKMIGKH 100
Query: 567 RNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLR-------------NDVEAVELDWTKRV 613
+NI+ L G C + +++I EY +G+L LR N V ++ + V
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLV 160
Query: 614 NIVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLV 673
+ +A + YL +HRD +ADFGLAR ++ +
Sbjct: 161 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTT 217
Query: 674 VGT--YGYIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHP 712
G ++APE + T + DV+SFGV+ E+ +G P
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 93/200 (46%), Gaps = 15/200 (7%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVALKK--LHRSETEEPAFLESFQTEARLLSQIRHRNIVKL 572
IG G G V A + +GK VA+KK L + + E F E ++ H N+V +
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLF-----NEVVIMRDYHHDNVVDM 107
Query: 573 YGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKP 632
Y L ++++ E++E G+L + V ++ + + S+ ALSYLH
Sbjct: 108 YSSYLVGDELWVVMEFLEGGALTDI----VTHTRMNEEQIATVCLSVLRALSYLH---NQ 160
Query: 633 SIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYTMAVTE 692
++HRD ++DFG + + R +VGT ++APE+ +
Sbjct: 161 GVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGT 220
Query: 693 KCDVYSFGVVALEVLMGSHP 712
+ D++S G++ +E++ G P
Sbjct: 221 EVDIWSLGIMVIEMIDGEPP 240
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 101/219 (46%), Gaps = 21/219 (9%)
Query: 508 EDFHIKYCIGTGGYGSVYRAQLSSGK-LVALKK--LHRSETEEPAFLESFQTEARLLSQI 564
+D+ ++ IG+G V A + K VA+K+ L + +T L+ Q +SQ
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQA----MSQC 70
Query: 565 RHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVE-----LDWTKRVNIVKSM 619
H NIV Y + ++L+ + + GS+ ++++ V E LD + I++ +
Sbjct: 71 HHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREV 130
Query: 620 AHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPD-----SSNRTLVV 674
L YLH K +HRD +ADFG++ L + R V
Sbjct: 131 LEGLEYLH---KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFV 187
Query: 675 GTYGYIAPELAYTMAVTE-KCDVYSFGVVALEVLMGSHP 712
GT ++APE+ + + K D++SFG+ A+E+ G+ P
Sbjct: 188 GTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAP 226
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 93/222 (41%), Gaps = 30/222 (13%)
Query: 516 IGTGGYGSVYRAQL--------SSGKLVALKKLHRSETEEPAFLESFQTEARLLSQI-RH 566
+G G +G V A+ VA+K L TE+ L +E ++ I +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD--LSDLVSEMEMMKMIGKH 100
Query: 567 RNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLR-------------NDVEAVELDWTKRV 613
+NI+ L G C + +++I EY +G+L LR N V ++ + V
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 614 NIVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLV 673
+ +A + YL +HRD +ADFGLAR ++ +
Sbjct: 161 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTT 217
Query: 674 VGT--YGYIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHP 712
G ++APE + T + DV+SFGV+ E+ +G P
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 96/225 (42%), Gaps = 36/225 (16%)
Query: 516 IGTGGYGSVYRAQL--------SSGKLVALKKLHRSETEEPAFLESFQTEARLLSQI-RH 566
+G G +G V A+ VA+K L TE+ L +E ++ I +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD--LSDLVSEMEMMKMIGKH 100
Query: 567 RNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLR-------------NDVEAVELDWTKRV 613
+NI+ L G C + +++I EY +G+L LR N V ++ + V
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 614 NIVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLL-----HPDSS 668
+ +A + YL +HRD +ADFGLAR + + ++
Sbjct: 161 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTT 217
Query: 669 NRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHP 712
N L V ++APE + T + DV+SFGV+ E+ +G P
Sbjct: 218 NGRLPV---KWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 101/219 (46%), Gaps = 21/219 (9%)
Query: 508 EDFHIKYCIGTGGYGSVYRAQLSSGK-LVALKK--LHRSETEEPAFLESFQTEARLLSQI 564
+D+ ++ IG+G V A + K VA+K+ L + +T L+ Q +SQ
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQA----MSQC 65
Query: 565 RHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVE-----LDWTKRVNIVKSM 619
H NIV Y + ++L+ + + GS+ ++++ V E LD + I++ +
Sbjct: 66 HHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREV 125
Query: 620 AHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPD-----SSNRTLVV 674
L YLH K +HRD +ADFG++ L + R V
Sbjct: 126 LEGLEYLH---KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFV 182
Query: 675 GTYGYIAPELAYTMAVTE-KCDVYSFGVVALEVLMGSHP 712
GT ++APE+ + + K D++SFG+ A+E+ G+ P
Sbjct: 183 GTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAP 221
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 96/225 (42%), Gaps = 36/225 (16%)
Query: 516 IGTGGYGSVYRAQL--------SSGKLVALKKLHRSETEEPAFLESFQTEARLLSQI-RH 566
+G G +G V A+ VA+K L TE+ L +E ++ I +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD--LSDLVSEMEMMKMIGKH 100
Query: 567 RNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLR-------------NDVEAVELDWTKRV 613
+NI+ L G C + +++I EY +G+L LR N V ++ + V
Sbjct: 101 KNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 614 NIVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLL-----HPDSS 668
+ +A + YL +HRD +ADFGLAR + + ++
Sbjct: 161 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 669 NRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHP 712
N L V ++APE + T + DV+SFGV+ E+ +G P
Sbjct: 218 NGRLPV---KWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 96/225 (42%), Gaps = 36/225 (16%)
Query: 516 IGTGGYGSVYRAQL--------SSGKLVALKKLHRSETEEPAFLESFQTEARLLSQI-RH 566
+G G +G V A+ VA+K L TE+ L +E ++ I +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD--LSDLVSEMEMMKMIGKH 100
Query: 567 RNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLR-------------NDVEAVELDWTKRV 613
+NI+ L G C + +++I EY +G+L LR N V ++ + V
Sbjct: 101 KNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 614 NIVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLL-----HPDSS 668
+ +A + YL +HRD +ADFGLAR + + ++
Sbjct: 161 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 669 NRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHP 712
N L V ++APE + T + DV+SFGV+ E+ +G P
Sbjct: 218 NGRLPV---KWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 88/212 (41%), Gaps = 12/212 (5%)
Query: 507 TEDFHIKYCIGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIR 565
ED+ + +G G YG V A + + VA+K + + E+ + E + +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEIXINKMLN 63
Query: 566 HRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSY 625
H N+VK YG +L EY G LF + D+ E D + + + Y
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVY 120
Query: 626 LHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTL--VVGTYGYIAPE 683
LH I HRD ++DFGLA + ++ R L + GT Y+APE
Sbjct: 121 LH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPE 177
Query: 684 LAYTMAV-TEKCDVYSFGVVALEVLMGSHPTD 714
L E DV+S G+V +L G P D
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 101/213 (47%), Gaps = 22/213 (10%)
Query: 504 IEATEDFHIKYCIGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARLLS 562
++ E + I +G G +G VY+A+ +G L A K + EE LE + E +L+
Sbjct: 7 LDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEE---LEDYIVEIEILA 63
Query: 563 QIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELD---WTKRVNIV-KS 618
H IVKL G H+ ++++ E+ G++ ++ +ELD ++ +V +
Sbjct: 64 TCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIM------LELDRGLTEPQIQVVCRQ 117
Query: 619 MAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYG 678
M AL++LH I+HRD + +ADFG++ R +GT
Sbjct: 118 MLEALNFLH---SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPY 174
Query: 679 YIAPE--LAYTMAVTE---KCDVYSFGVVALEV 706
++APE + TM T K D++S G+ +E+
Sbjct: 175 WMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 207
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 94/212 (44%), Gaps = 20/212 (9%)
Query: 508 EDFHIKYC--IGTGGYGSVYRA-----QLSSGKLVALKKLHRSETEEPAFLESFQTEARL 560
E+ H+K+ +G G +GSV Q ++G++VA+KKL S TEE L F+ E +
Sbjct: 9 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEE--HLRDFEREIEI 65
Query: 561 LSQIRHRNIVKLYGFCLH--NKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKS 618
L ++H NIVK G C + + LI EY+ GSL L+ E + D K +
Sbjct: 66 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQ 123
Query: 619 MAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYG 678
+ + YL +HR+ + DFGL ++L D +
Sbjct: 124 ICKGMEYL---GTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGES 180
Query: 679 ---YIAPELAYTMAVTEKCDVYSFGVVALEVL 707
+ APE + DV+SFGVV E+
Sbjct: 181 PIFWYAPESLTESKFSVASDVWSFGVVLYELF 212
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 88/212 (41%), Gaps = 12/212 (5%)
Query: 507 TEDFHIKYCIGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIR 565
ED+ + +G G YG V A + + VA+K + + E+ + E + +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEIXINKMLN 62
Query: 566 HRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSY 625
H N+VK YG +L EY G LF + D+ E D + + + Y
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVY 119
Query: 626 LHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTL--VVGTYGYIAPE 683
LH I HRD ++DFGLA + ++ R L + GT Y+APE
Sbjct: 120 LH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 684 LAYTMAV-TEKCDVYSFGVVALEVLMGSHPTD 714
L E DV+S G+V +L G P D
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 88/212 (41%), Gaps = 12/212 (5%)
Query: 507 TEDFHIKYCIGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIR 565
ED+ + +G G YG V A + + VA+K + + E+ + E + +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEIXINKMLN 62
Query: 566 HRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSY 625
H N+VK YG +L EY G LF + D+ E D + + + Y
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVY 119
Query: 626 LHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTL--VVGTYGYIAPE 683
LH I HRD ++DFGLA + ++ R L + GT Y+APE
Sbjct: 120 LH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPE 176
Query: 684 LAYTMAV-TEKCDVYSFGVVALEVLMGSHPTD 714
L E DV+S G+V +L G P D
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 102/228 (44%), Gaps = 38/228 (16%)
Query: 509 DFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHR 567
DF +G G +G V +A+ + + A+KK+ +E + L + +E LL+ + H+
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEK----LSTILSEVMLLASLNHQ 62
Query: 568 NIVKLYGFCLHNK-------------CMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVN 614
+V+ Y L + +F+ EY E +L+ ++ ++ + D R
Sbjct: 63 YVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWR-- 120
Query: 615 IVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLH---------- 664
+ + + ALSY+H I+HRD + DFGLA+ +H
Sbjct: 121 LFRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDS 177
Query: 665 ---PDSS-NRTLVVGTYGYIAPE-LAYTMAVTEKCDVYSFGVVALEVL 707
P SS N T +GT Y+A E L T EK D+YS G++ E++
Sbjct: 178 QNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 96/225 (42%), Gaps = 36/225 (16%)
Query: 516 IGTGGYGSVYRAQL--------SSGKLVALKKLHRSETEEPAFLESFQTEARLLSQI-RH 566
+G G +G V A+ VA+K L TE+ L +E ++ I +H
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD--LSDLVSEMEMMKMIGKH 146
Query: 567 RNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLR-------------NDVEAVELDWTKRV 613
+NI+ L G C + +++I EY +G+L LR N V ++ + V
Sbjct: 147 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 206
Query: 614 NIVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLL-----HPDSS 668
+ +A + YL +HRD +ADFGLAR + + ++
Sbjct: 207 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 263
Query: 669 NRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHP 712
N L V ++APE + T + DV+SFGV+ E+ +G P
Sbjct: 264 NGRLPV---KWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 305
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 22/201 (10%)
Query: 516 IGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
+G G +G VY+A+ +G L A K + EE LE + E +L+ H IVKL G
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEE---LEDYIVEIEILATCDHPYIVKLLG 83
Query: 575 FCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELD---WTKRVNIV-KSMAHALSYLHYDC 630
H+ ++++ E+ G++ ++ +ELD ++ +V + M AL++LH
Sbjct: 84 AYYHDGKLWIMIEFCPGGAVDAIM------LELDRGLTEPQIQVVCRQMLEALNFLH--- 134
Query: 631 KPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPE--LAYTM 688
I+HRD + +ADFG++ R +GT ++APE + TM
Sbjct: 135 SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETM 194
Query: 689 AVTE---KCDVYSFGVVALEV 706
T K D++S G+ +E+
Sbjct: 195 KDTPYDYKADIWSLGITLIEM 215
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 99/211 (46%), Gaps = 25/211 (11%)
Query: 508 EDF-HIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRH 566
EDF I +G G +G VY+AQ ++A K+ +++EE LE + E +L+ H
Sbjct: 36 EDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEE--LEDYMVEIDILASCDH 93
Query: 567 RNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTK-----RVNIV-KSMA 620
NIVKL + ++++ E+ G+ V+AV L+ + ++ +V K
Sbjct: 94 PNIVKLLDAFYYENNLWILIEFCAGGA--------VDAVMLELERPLTESQIQVVCKQTL 145
Query: 621 HALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYI 680
AL+YLH + I+HRD + +ADFG++ R +GT ++
Sbjct: 146 DALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFIGTPYWM 202
Query: 681 APELAYTMAVTE-----KCDVYSFGVVALEV 706
APE+ + K DV+S G+ +E+
Sbjct: 203 APEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 89/212 (41%), Gaps = 12/212 (5%)
Query: 507 TEDFHIKYCIGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIR 565
ED+ + +G G YG V A + + VA+K + + E+ + E + + +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINAMLN 63
Query: 566 HRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSY 625
H N+VK YG +L EY G LF + D+ E D + + + Y
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVY 120
Query: 626 LHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTL--VVGTYGYIAPE 683
LH I HRD ++DFGLA + ++ R L + GT Y+APE
Sbjct: 121 LH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 684 LAYTMAV-TEKCDVYSFGVVALEVLMGSHPTD 714
L E DV+S G+V +L G P D
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 96/225 (42%), Gaps = 36/225 (16%)
Query: 516 IGTGGYGSVYRAQL--------SSGKLVALKKLHRSETEEPAFLESFQTEARLLSQI-RH 566
+G G +G V A+ VA+K L TE+ L +E ++ I +H
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD--LSDLVSEMEMMKMIGKH 89
Query: 567 RNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLR-------------NDVEAVELDWTKRV 613
+NI+ L G C + +++I EY +G+L LR N V ++ + V
Sbjct: 90 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 149
Query: 614 NIVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLL-----HPDSS 668
+ +A + YL +HRD +ADFGLAR + + ++
Sbjct: 150 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 206
Query: 669 NRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHP 712
N L V ++APE + T + DV+SFGV+ E+ +G P
Sbjct: 207 NGRLPV---KWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 248
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 96/225 (42%), Gaps = 36/225 (16%)
Query: 516 IGTGGYGSVYRAQL--------SSGKLVALKKLHRSETEEPAFLESFQTEARLLSQI-RH 566
+G G +G V A+ VA+K L TE+ L +E ++ I +H
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD--LSDLVSEMEMMKMIGKH 87
Query: 567 RNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLR-------------NDVEAVELDWTKRV 613
+NI+ L G C + +++I EY +G+L LR N V ++ + V
Sbjct: 88 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 147
Query: 614 NIVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLL-----HPDSS 668
+ +A + YL +HRD +ADFGLAR + + ++
Sbjct: 148 SCTYQLARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTT 204
Query: 669 NRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHP 712
N L V ++APE + T + DV+SFGV+ E+ +G P
Sbjct: 205 NGRLPV---KWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 246
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 88/212 (41%), Gaps = 12/212 (5%)
Query: 507 TEDFHIKYCIGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIR 565
ED+ + +G G YG V A + + VA+K + + E+ + E + +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINKMLN 63
Query: 566 HRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSY 625
H N+VK YG +L EY G LF + D+ E D + + + Y
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVY 120
Query: 626 LHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTL--VVGTYGYIAPE 683
LH I HRD ++DFGLA + ++ R L + GT Y+APE
Sbjct: 121 LH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 684 LAYTMAV-TEKCDVYSFGVVALEVLMGSHPTD 714
L E DV+S G+V +L G P D
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 92/200 (46%), Gaps = 17/200 (8%)
Query: 516 IGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
IG G YG V++ + +G++VA+KK SE ++P + E R+L Q++H N+V L
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESE-DDPVIKKIALREIRMLKQLKHPNLVNLLE 69
Query: 575 FCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKR---VNIVKSMA-HALSYLHYDC 630
+ + L++EY + L ELD +R ++VKS+ L +++
Sbjct: 70 VFRRKRRLHLVFEYCDHTVLH----------ELDRYQRGVPEHLVKSITWQTLQAVNFCH 119
Query: 631 KPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAY-TMA 689
K + +HRD + DFG ARLL S V T Y +PEL
Sbjct: 120 KHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQ 179
Query: 690 VTEKCDVYSFGVVALEVLMG 709
DV++ G V E+L G
Sbjct: 180 YGPPVDVWAIGCVFAELLSG 199
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 88/212 (41%), Gaps = 12/212 (5%)
Query: 507 TEDFHIKYCIGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIR 565
ED+ + +G G YG V A + + VA+K + + E+ + E + +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINKMLN 63
Query: 566 HRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSY 625
H N+VK YG +L EY G LF + D+ E D + + + Y
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVY 120
Query: 626 LHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTL--VVGTYGYIAPE 683
LH I HRD ++DFGLA + ++ R L + GT Y+APE
Sbjct: 121 LH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 684 LAYTMAV-TEKCDVYSFGVVALEVLMGSHPTD 714
L E DV+S G+V +L G P D
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 96/225 (42%), Gaps = 36/225 (16%)
Query: 516 IGTGGYGSVYRAQL--------SSGKLVALKKLHRSETEEPAFLESFQTEARLLSQI-RH 566
+G G +G V A+ VA+K L TE+ L +E ++ I +H
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD--LSDLVSEMEMMKMIGKH 92
Query: 567 RNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLR-------------NDVEAVELDWTKRV 613
+NI+ L G C + +++I EY +G+L LR N V ++ + V
Sbjct: 93 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 152
Query: 614 NIVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLL-----HPDSS 668
+ +A + YL +HRD +ADFGLAR + + ++
Sbjct: 153 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 209
Query: 669 NRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHP 712
N L V ++APE + T + DV+SFGV+ E+ +G P
Sbjct: 210 NGRLPV---KWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 251
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 88/212 (41%), Gaps = 12/212 (5%)
Query: 507 TEDFHIKYCIGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIR 565
ED+ + +G G YG V A + + VA+K + + E+ + E + +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINKMLN 63
Query: 566 HRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSY 625
H N+VK YG +L EY G LF + D+ E D + + + Y
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVY 120
Query: 626 LHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTL--VVGTYGYIAPE 683
LH I HRD ++DFGLA + ++ R L + GT Y+APE
Sbjct: 121 LH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 684 LAYTMAV-TEKCDVYSFGVVALEVLMGSHPTD 714
L E DV+S G+V +L G P D
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 88/212 (41%), Gaps = 12/212 (5%)
Query: 507 TEDFHIKYCIGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIR 565
ED+ + +G G YG V A + + VA+K + + E+ + E + +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINKMLN 63
Query: 566 HRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSY 625
H N+VK YG +L EY G LF + D+ E D + + + Y
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVY 120
Query: 626 LHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTL--VVGTYGYIAPE 683
LH I HRD ++DFGLA + ++ R L + GT Y+APE
Sbjct: 121 LH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 684 LAYTMAV-TEKCDVYSFGVVALEVLMGSHPTD 714
L E DV+S G+V +L G P D
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 88/212 (41%), Gaps = 12/212 (5%)
Query: 507 TEDFHIKYCIGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIR 565
ED+ + +G G YG V A + + VA+K + + E+ + E + +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINKMLN 62
Query: 566 HRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSY 625
H N+VK YG +L EY G LF + D+ E D + + + Y
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVY 119
Query: 626 LHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTL--VVGTYGYIAPE 683
LH I HRD ++DFGLA + ++ R L + GT Y+APE
Sbjct: 120 LH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 684 LAYTMAV-TEKCDVYSFGVVALEVLMGSHPTD 714
L E DV+S G+V +L G P D
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2OMU|A Chain A, Crystal Structure Of Inla G194s+s Y369s/hec1 Complex
Length = 462
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 87/266 (32%), Positives = 126/266 (47%), Gaps = 27/266 (10%)
Query: 31 LSGRMPSEIGALS---KLEKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTGTIPSEX 87
LS S+I ALS L++L S N +T P + L+ L+ LD+S N+++ S
Sbjct: 136 LSSNTISDISALSGLTSLQQLSFSSNQVTDLKP--LANLTTLERLDISSNKVSDI--SVL 191
Query: 88 XXXXXXXXXXXXXXXXXXXXPLEFGNLKDLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLS 147
PL G L +LD+L L GN+L + ++ +LTNLT LDL+
Sbjct: 192 AKLTNLESLIATNNQISDITPL--GILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLA 247
Query: 148 LNQLSGRLPQEVGNLKNLKSLFLDNNHLSGPIPSTLYHLNQLATLCLGYNKL--VGPVTK 205
NQ+S P + L L L L N +S P L L L L L N+L + P++
Sbjct: 248 NNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISPIS- 302
Query: 206 EVGNMKNLDRLHLNGNNLTGSIPSTIGYLNLLDELHLSHNRLDGPIPPTIGNLTNLIALD 265
N+KNL L L NN++ P + L L L S+N++ ++ NLTN+ L
Sbjct: 303 ---NLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFSNNKVSDV--SSLANLTNINWLS 355
Query: 266 LSSNQLSGLLPREVGNLKYLASLSLN 291
NQ+S L P + NL + L LN
Sbjct: 356 AGHNQISDLTP--LANLTRITQLGLN 379
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 94/201 (46%), Gaps = 32/201 (15%)
Query: 113 NLKDLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNLKSLFLDN 172
NL L + + N++ + P + NLTNLT L L NQ++ P + NL NL L L +
Sbjct: 83 NLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSS 138
Query: 173 NHLSGPIPSTLYHLNQLATLCLGYNKLVGPVTKEVGNMKNLDRLHLNGN----------- 221
N +S S L L L L N++ K + N+ L+RL ++ N
Sbjct: 139 NTISDI--SALSGLTSLQQLSFSSNQVTD--LKPLANLTTLERLDISSNKVSDISVLAKL 194
Query: 222 -NLTGSIPST--------IGYLNLLDELHLSHNRLDGPIPPTIGNLTNLIALDLSSNQLS 272
NL I + +G L LDEL L+ N+L T+ +LTNL LDL++NQ+S
Sbjct: 195 TNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQIS 252
Query: 273 GLLPREVGNLKYLASLSLNGN 293
L P + L L L L N
Sbjct: 253 NLAP--LSGLTKLTELKLGAN 271
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 83/160 (51%), Gaps = 11/160 (6%)
Query: 116 DLDQLR-LQGNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNLKSLFLDNNH 174
DLDQ+ LQ ++L + L NLT ++ S NQL+ P + NL L + ++NN
Sbjct: 39 DLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQ 96
Query: 175 LSGPIPSTLYHLNQLATLCLGYNKLVGPVTKEVGNMKNLDRLHLNGNNLTGSIPSTIGYL 234
++ P L +L L L L N++ + N+ NL+RL L+ N T S S + L
Sbjct: 97 IADITP--LANLTNLTGLTLFNNQITD--IDPLKNLTNLNRLELSSN--TISDISALSGL 150
Query: 235 NLLDELHLSHNRLDGPIPPTIGNLTNLIALDLSSNQLSGL 274
L +L S N++ P + NLT L LD+SSN++S +
Sbjct: 151 TSLQQLSFSSNQVTDLKP--LANLTTLERLDISSNKVSDI 188
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 98/222 (44%), Gaps = 17/222 (7%)
Query: 516 IGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGF 575
+G+G +G V + VA+K + E F + EA+ + ++ H +VK YG
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQ----EAQTMMKLSHPKLVKFYGV 71
Query: 576 CLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIV 635
C ++++ EY+ G L LR+ + +E ++ + + + +++L +
Sbjct: 72 CSKEYPIYIVTEYISNGCLLNYLRSHGKGLEP--SQLLEMCYDVCEGMAFLE---SHQFI 126
Query: 636 HRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGT---YGYIAPELAYTMAVTE 692
HRD V+DFG+ R + D + VGT + APE+ + +
Sbjct: 127 HRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSS--VGTKFPVKWSAPEVFHYFKYSS 184
Query: 693 KCDVYSFGVVALEVL-MGSHPTDXXXXXXXXXGRKISQNPRL 733
K DV++FG++ EV +G P D K+SQ RL
Sbjct: 185 KSDVWAFGILMWEVFSLGKMPYDLYTNSEVVL--KVSQGHRL 224
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 88/212 (41%), Gaps = 12/212 (5%)
Query: 507 TEDFHIKYCIGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIR 565
ED+ + +G G YG V A + + VA+K + + E+ + E + +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINKMLN 62
Query: 566 HRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSY 625
H N+VK YG +L EY G LF + D+ E D + + + Y
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVY 119
Query: 626 LHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTL--VVGTYGYIAPE 683
LH I HRD ++DFGLA + ++ R L + GT Y+APE
Sbjct: 120 LH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 684 LAYTMAV-TEKCDVYSFGVVALEVLMGSHPTD 714
L E DV+S G+V +L G P D
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 88/212 (41%), Gaps = 12/212 (5%)
Query: 507 TEDFHIKYCIGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIR 565
ED+ + +G G YG V A + + VA+K + + E+ + E + +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINKMLN 62
Query: 566 HRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSY 625
H N+VK YG +L EY G LF + D+ E D + + + Y
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVY 119
Query: 626 LHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTL--VVGTYGYIAPE 683
LH I HRD ++DFGLA + ++ R L + GT Y+APE
Sbjct: 120 LH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 684 LAYTMAV-TEKCDVYSFGVVALEVLMGSHPTD 714
L E DV+S G+V +L G P D
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 91/203 (44%), Gaps = 21/203 (10%)
Query: 516 IGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
+G G YG V + + +G++VA+KK S+ ++ + E +LL Q+RH N+V L
Sbjct: 33 VGEGSYGMVMKCRNKDTGRIVAIKKFLESD-DDKMVKKIAMREIKLLKQLRHENLVNLLE 91
Query: 575 FCLHNKCMFLIYEYMERGSLFCVLRNDVEAVE--LDWTKRVNIVKSMAHALSYLHYDCKP 632
C K +L++E+++ L +D+E LD+ + + + + + H
Sbjct: 92 VCKKKKRWYLVFEFVDHTIL-----DDLELFPNGLDYQVVQKYLFQIINGIGFCH---SH 143
Query: 633 SIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPEL-----AYT 687
+I+HRD + DFG AR L V T Y APEL Y
Sbjct: 144 NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYG 203
Query: 688 MAVTEKCDVYSFGVVALEVLMGS 710
AV DV++ G + E+ MG
Sbjct: 204 KAV----DVWAIGCLVTEMFMGE 222
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 88/212 (41%), Gaps = 12/212 (5%)
Query: 507 TEDFHIKYCIGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIR 565
ED+ + +G G YG V A + + VA+K + + E+ + E + +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINKMLN 63
Query: 566 HRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSY 625
H N+VK YG +L EY G LF + D+ E D + + + Y
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVY 120
Query: 626 LHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTL--VVGTYGYIAPE 683
LH I HRD ++DFGLA + ++ R L + GT Y+APE
Sbjct: 121 LH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 684 LAYTMAV-TEKCDVYSFGVVALEVLMGSHPTD 714
L E DV+S G+V +L G P D
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 88/212 (41%), Gaps = 12/212 (5%)
Query: 507 TEDFHIKYCIGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIR 565
ED+ + +G G YG V A + + VA+K + + E+ + E + +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINKMLN 63
Query: 566 HRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSY 625
H N+VK YG +L EY G LF + D+ E D + + + Y
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVY 120
Query: 626 LHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTL--VVGTYGYIAPE 683
LH I HRD ++DFGLA + ++ R L + GT Y+APE
Sbjct: 121 LH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 684 LAYTMAV-TEKCDVYSFGVVALEVLMGSHPTD 714
L E DV+S G+V +L G P D
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 88/212 (41%), Gaps = 12/212 (5%)
Query: 507 TEDFHIKYCIGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIR 565
ED+ + +G G YG V A + + VA+K + + E+ + E + +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINKMLN 62
Query: 566 HRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSY 625
H N+VK YG +L EY G LF + D+ E D + + + Y
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVY 119
Query: 626 LHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTL--VVGTYGYIAPE 683
LH I HRD ++DFGLA + ++ R L + GT Y+APE
Sbjct: 120 LH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 684 LAYTMAV-TEKCDVYSFGVVALEVLMGSHPTD 714
L E DV+S G+V +L G P D
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 88/212 (41%), Gaps = 12/212 (5%)
Query: 507 TEDFHIKYCIGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIR 565
ED+ + +G G YG V A + + VA+K + + E+ + E + +
Sbjct: 4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINKMLN 61
Query: 566 HRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSY 625
H N+VK YG +L EY G LF + D+ E D + + + Y
Sbjct: 62 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVY 118
Query: 626 LHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTL--VVGTYGYIAPE 683
LH I HRD ++DFGLA + ++ R L + GT Y+APE
Sbjct: 119 LH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 175
Query: 684 LAYTMAV-TEKCDVYSFGVVALEVLMGSHPTD 714
L E DV+S G+V +L G P D
Sbjct: 176 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 207
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 88/212 (41%), Gaps = 12/212 (5%)
Query: 507 TEDFHIKYCIGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIR 565
ED+ + +G G YG V A + + VA+K + + E+ + E + +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINKMLN 62
Query: 566 HRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSY 625
H N+VK YG +L EY G LF + D+ E D + + + Y
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVY 119
Query: 626 LHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTL--VVGTYGYIAPE 683
LH I HRD ++DFGLA + ++ R L + GT Y+APE
Sbjct: 120 LH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 684 LAYTMAV-TEKCDVYSFGVVALEVLMGSHPTD 714
L E DV+S G+V +L G P D
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 99/211 (46%), Gaps = 25/211 (11%)
Query: 508 EDF-HIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRH 566
EDF I +G G +G VY+AQ ++A K+ +++EE LE + E +L+ H
Sbjct: 36 EDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEE--LEDYMVEIDILASCDH 93
Query: 567 RNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTK-----RVNIV-KSMA 620
NIVKL + ++++ E+ G+ V+AV L+ + ++ +V K
Sbjct: 94 PNIVKLLDAFYYENNLWILIEFCAGGA--------VDAVMLELERPLTESQIQVVCKQTL 145
Query: 621 HALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYI 680
AL+YLH + I+HRD + +ADFG++ R +GT ++
Sbjct: 146 DALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFIGTPYWM 202
Query: 681 APELAYTMAVTE-----KCDVYSFGVVALEV 706
APE+ + K DV+S G+ +E+
Sbjct: 203 APEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 88/212 (41%), Gaps = 12/212 (5%)
Query: 507 TEDFHIKYCIGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIR 565
ED+ + +G G YG V A + + VA+K + + E+ + E + +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINKMLN 62
Query: 566 HRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSY 625
H N+VK YG +L EY G LF + D+ E D + + + Y
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVY 119
Query: 626 LHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTL--VVGTYGYIAPE 683
LH I HRD ++DFGLA + ++ R L + GT Y+APE
Sbjct: 120 LH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPE 176
Query: 684 LAYTMAV-TEKCDVYSFGVVALEVLMGSHPTD 714
L E DV+S G+V +L G P D
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 88/212 (41%), Gaps = 12/212 (5%)
Query: 507 TEDFHIKYCIGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIR 565
ED+ + +G G YG V A + + VA+K + + E+ + E + +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINKMLN 62
Query: 566 HRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSY 625
H N+VK YG +L EY G LF + D+ E D + + + Y
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVY 119
Query: 626 LHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTL--VVGTYGYIAPE 683
LH I HRD ++DFGLA + ++ R L + GT Y+APE
Sbjct: 120 LH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPE 176
Query: 684 LAYTMAV-TEKCDVYSFGVVALEVLMGSHPTD 714
L E DV+S G+V +L G P D
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 99/211 (46%), Gaps = 25/211 (11%)
Query: 508 EDF-HIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRH 566
EDF I +G G +G VY+AQ ++A K+ +++EE LE + E +L+ H
Sbjct: 36 EDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEE--LEDYMVEIDILASCDH 93
Query: 567 RNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTK-----RVNIV-KSMA 620
NIVKL + ++++ E+ G+ V+AV L+ + ++ +V K
Sbjct: 94 PNIVKLLDAFYYENNLWILIEFCAGGA--------VDAVMLELERPLTESQIQVVCKQTL 145
Query: 621 HALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYI 680
AL+YLH + I+HRD + +ADFG++ R +GT ++
Sbjct: 146 DALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWM 202
Query: 681 APELAYTMAVTE-----KCDVYSFGVVALEV 706
APE+ + K DV+S G+ +E+
Sbjct: 203 APEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 88/212 (41%), Gaps = 12/212 (5%)
Query: 507 TEDFHIKYCIGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIR 565
ED+ + +G G YG V A + + VA+K + + E+ + E + +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINKMLN 62
Query: 566 HRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSY 625
H N+VK YG +L EY G LF + D+ E D + + + Y
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVY 119
Query: 626 LHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTL--VVGTYGYIAPE 683
LH I HRD ++DFGLA + ++ R L + GT Y+APE
Sbjct: 120 LH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 684 LAYTMAV-TEKCDVYSFGVVALEVLMGSHPTD 714
L E DV+S G+V +L G P D
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 88/192 (45%), Gaps = 14/192 (7%)
Query: 516 IGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGF 575
IG G +G V K VA+K + T + +F EA +++Q+RH N+V+L G
Sbjct: 14 IGKGEFGDVMLGDYRGNK-VAVKCIKNDATAQ-----AFLAEASVMTQLRHSNLVQLLGV 67
Query: 576 CLHNK-CMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSI 634
+ K ++++ EYM +GSL LR+ +V L + + A+ YL + +
Sbjct: 68 IVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEGN---NF 123
Query: 635 VHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYTMAVTEKC 694
VHRD A V+DFGL + L V + APE + K
Sbjct: 124 VHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPV---KWTAPEALREKKFSTKS 180
Query: 695 DVYSFGVVALEV 706
DV+SFG++ E+
Sbjct: 181 DVWSFGILLWEI 192
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 96/203 (47%), Gaps = 24/203 (11%)
Query: 508 EDFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHR 567
E ++ +G G +G V+ A + VA+K + +E+F EA ++ ++H
Sbjct: 182 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMS----VEAFLAEANVMKTLQHD 237
Query: 568 NIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLH 627
+VKL+ + + +++I E+M +GSL L++D E + K ++ +A ++++
Sbjct: 238 KLVKLHA-VVTKEPIYIITEFMAKGSLLDFLKSD-EGSKQPLPKLIDFSAQIAEGMAFIE 295
Query: 628 YDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGT---YGYIAPEL 684
+ + +HRD +ADFGLAR VG + APE
Sbjct: 296 ---QRNYIHRDLRAANILVSASLVCKIADFGLAR------------VGAKFPIKWTAPEA 340
Query: 685 AYTMAVTEKCDVYSFGVVALEVL 707
+ T K DV+SFG++ +E++
Sbjct: 341 INFGSFTIKSDVWSFGILLMEIV 363
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 88/212 (41%), Gaps = 12/212 (5%)
Query: 507 TEDFHIKYCIGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIR 565
ED+ + +G G YG V A + + VA+K + + E+ + E + +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINKMLN 62
Query: 566 HRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSY 625
H N+VK YG +L EY G LF + D+ E D + + + Y
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVY 119
Query: 626 LHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTL--VVGTYGYIAPE 683
LH I HRD ++DFGLA + ++ R L + GT Y+APE
Sbjct: 120 LH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPE 176
Query: 684 LAYTMAV-TEKCDVYSFGVVALEVLMGSHPTD 714
L E DV+S G+V +L G P D
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 87/198 (43%), Gaps = 7/198 (3%)
Query: 516 IGTGGYGSVYR-AQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
+G GG+ + + + ++ A K + +S +P E E + + H+++V +G
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 575 FCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSI 634
F N +F++ E R SL + + E + ++ + YLH + +
Sbjct: 109 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEAR---YYLRQIVLGCQYLHRN---RV 162
Query: 635 VHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYTMAVTEKC 694
+HRD E + DFGLA + D + ++ GT YIAPE+ + +
Sbjct: 163 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEV 222
Query: 695 DVYSFGVVALEVLMGSHP 712
DV+S G + +L+G P
Sbjct: 223 DVWSIGCIMYTLLVGKPP 240
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 88/192 (45%), Gaps = 14/192 (7%)
Query: 516 IGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGF 575
IG G +G V K VA+K + T + +F EA +++Q+RH N+V+L G
Sbjct: 29 IGKGEFGDVMLGDYRGNK-VAVKCIKNDATAQ-----AFLAEASVMTQLRHSNLVQLLGV 82
Query: 576 CLHNK-CMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSI 634
+ K ++++ EYM +GSL LR+ +V L + + A+ YL + +
Sbjct: 83 IVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEGN---NF 138
Query: 635 VHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYTMAVTEKC 694
VHRD A V+DFGL + L V + APE + K
Sbjct: 139 VHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPV---KWTAPEALREKKFSTKS 195
Query: 695 DVYSFGVVALEV 706
DV+SFG++ E+
Sbjct: 196 DVWSFGILLWEI 207
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 87/198 (43%), Gaps = 7/198 (3%)
Query: 516 IGTGGYGSVYR-AQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
+G GG+ + + + ++ A K + +S +P E E + + H+++V +G
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 575 FCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSI 634
F N +F++ E R SL + + E + ++ + YLH + +
Sbjct: 107 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEAR---YYLRQIVLGCQYLHRN---RV 160
Query: 635 VHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYTMAVTEKC 694
+HRD E + DFGLA + D + ++ GT YIAPE+ + +
Sbjct: 161 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEV 220
Query: 695 DVYSFGVVALEVLMGSHP 712
DV+S G + +L+G P
Sbjct: 221 DVWSIGCIMYTLLVGKPP 238
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 105/241 (43%), Gaps = 44/241 (18%)
Query: 496 GRITFEEMIEATEDFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQ 555
G F ++++AT FH+K G GY +V A+K L E P+ L
Sbjct: 32 GEGEFGKVVKATA-FHLK---GRAGYTTV-----------AVKML--KENASPSELRDLL 74
Query: 556 TEARLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLR---------------- 599
+E +L Q+ H +++KLYG C + + LI EY + GSL LR
Sbjct: 75 SEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSR 134
Query: 600 -----NDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFV 654
+ + L ++ ++ + YL + S+VHRD + +
Sbjct: 135 NSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMSLVHRDLAARNILVAEGRKMKI 191
Query: 655 ADFGLARLLHPDSSNRTLVVGT--YGYIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSH 711
+DFGL+R ++ + S G ++A E + T + DV+SFGV+ E++ +G +
Sbjct: 192 SDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGN 251
Query: 712 P 712
P
Sbjct: 252 P 252
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 97/212 (45%), Gaps = 30/212 (14%)
Query: 515 CIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
C+G G YG V+R L G+ VA+K + S E+ F E TE +RH NI+
Sbjct: 15 CVGKGRYGEVWRG-LWHGESVAVK-IFSSRDEQSWFRE---TEIYNTVLLRHDNILGFIA 69
Query: 575 FCLHNK----CMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDC 630
+ ++ ++LI Y E GSL+ L+ L + + S A L++LH +
Sbjct: 70 SDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHL----ALRLAVSAACGLAHLHVEI 125
Query: 631 -----KPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLV-----VGTYGYI 680
KP+I HRD + +AD GLA ++H S+ + VGT Y+
Sbjct: 126 FGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLA-VMHSQGSDYLDIGNNPRVGTKRYM 184
Query: 681 APELAYTMAVTE------KCDVYSFGVVALEV 706
APE+ T+ D+++FG+V E+
Sbjct: 185 APEVLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 90/197 (45%), Gaps = 18/197 (9%)
Query: 516 IGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
IG G +G+VY A+ + + ++VA+KK+ S + + E R L ++RH N ++ G
Sbjct: 62 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 121
Query: 575 FCLHNKCMFLIYEYM--ERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKP 632
L +L+ EY L V + ++ VE+ + L+YLH
Sbjct: 122 CYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEI-----AAVTHGALQGLAYLH---SH 173
Query: 633 SIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYTMAVTE 692
+++HRD + DFG A ++ P + VGT ++APE+ M +
Sbjct: 174 NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANX----FVGTPYWMAPEVILAMDEGQ 229
Query: 693 ---KCDVYSFGVVALEV 706
K DV+S G+ +E+
Sbjct: 230 YDGKVDVWSLGITCIEL 246
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 90/211 (42%), Gaps = 16/211 (7%)
Query: 511 HIKYCIGTGGYGSVYRAQL--SSGKLV--ALKKLHRSETEEPAFLESFQTEARLLSQIRH 566
H IG G +G VY L + GK + A+K L+R + + F TE ++ H
Sbjct: 51 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSH 108
Query: 567 RNIVKLYGFCLHNK-CMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSY 625
N++ L G CL ++ ++ YM+ G L +RN+ + + +A + Y
Sbjct: 109 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKY 166
Query: 626 LHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDS----SNRTLVVGTYGYIA 681
L VHRD VADFGLAR ++ N+T ++A
Sbjct: 167 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 223
Query: 682 PELAYTMAVTEKCDVYSFGVVALEVLMGSHP 712
E T T K DV+SFGV+ E++ P
Sbjct: 224 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 254
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 90/211 (42%), Gaps = 16/211 (7%)
Query: 511 HIKYCIGTGGYGSVYRAQL--SSGKLV--ALKKLHRSETEEPAFLESFQTEARLLSQIRH 566
H IG G +G VY L + GK + A+K L+R + + F TE ++ H
Sbjct: 32 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSH 89
Query: 567 RNIVKLYGFCLHNK-CMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSY 625
N++ L G CL ++ ++ YM+ G L +RN+ + + +A + Y
Sbjct: 90 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKY 147
Query: 626 LHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSS----NRTLVVGTYGYIA 681
L VHRD VADFGLAR ++ N+T ++A
Sbjct: 148 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMA 204
Query: 682 PELAYTMAVTEKCDVYSFGVVALEVLMGSHP 712
E T T K DV+SFGV+ E++ P
Sbjct: 205 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 95/225 (42%), Gaps = 36/225 (16%)
Query: 516 IGTGGYGSVYRAQL--------SSGKLVALKKLHRSETEEPAFLESFQTEARLLSQI-RH 566
+G G +G V A+ VA+K L TE+ L +E ++ I +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD--LSDLVSEMEMMKMIGKH 100
Query: 567 RNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLR-------------NDVEAVELDWTKRV 613
+NI+ L G C + +++I Y +G+L LR N V ++ + V
Sbjct: 101 KNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 614 NIVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLL-----HPDSS 668
+ +A + YL +HRD +ADFGLAR + + ++
Sbjct: 161 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 669 NRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHP 712
N L V ++APE + T + DV+SFGV+ E+ +G P
Sbjct: 218 NGRLPV---KWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 88/192 (45%), Gaps = 14/192 (7%)
Query: 516 IGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGF 575
IG G +G V K VA+K + T + +F EA +++Q+RH N+V+L G
Sbjct: 201 IGKGEFGDVMLGDYRGNK-VAVKCIKNDATAQ-----AFLAEASVMTQLRHSNLVQLLGV 254
Query: 576 CLHNK-CMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSI 634
+ K ++++ EYM +GSL LR+ +V L + + A+ YL + +
Sbjct: 255 IVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEGN---NF 310
Query: 635 VHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYTMAVTEKC 694
VHRD A V+DFGL + L V + APE + K
Sbjct: 311 VHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPV---KWTAPEALREKKFSTKS 367
Query: 695 DVYSFGVVALEV 706
DV+SFG++ E+
Sbjct: 368 DVWSFGILLWEI 379
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 90/211 (42%), Gaps = 16/211 (7%)
Query: 511 HIKYCIGTGGYGSVYRAQL--SSGKLV--ALKKLHRSETEEPAFLESFQTEARLLSQIRH 566
H IG G +G VY L + GK + A+K L+R + + F TE ++ H
Sbjct: 52 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSH 109
Query: 567 RNIVKLYGFCLHNK-CMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSY 625
N++ L G CL ++ ++ YM+ G L +RN+ + + +A + Y
Sbjct: 110 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--DLIGFGLQVAKGMKY 167
Query: 626 LHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDS----SNRTLVVGTYGYIA 681
L VHRD VADFGLAR ++ N+T ++A
Sbjct: 168 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 224
Query: 682 PELAYTMAVTEKCDVYSFGVVALEVLMGSHP 712
E T T K DV+SFGV+ E++ P
Sbjct: 225 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 255
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 101/218 (46%), Gaps = 34/218 (15%)
Query: 519 GGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQ--IRHRNIVKLY--- 573
G +G V++AQL + VA+K + + S+Q+E + S ++H N+++
Sbjct: 26 GRFGCVWKAQLMN-DFVAVKIFPLQDKQ------SWQSEREIFSTPGMKHENLLQFIAAE 78
Query: 574 --GFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDC- 630
G L + ++LI + ++GSL L+ ++ + W + ++ ++M+ LSYLH D
Sbjct: 79 KRGSNLEVE-LWLITAFHDKGSLTDYLKGNI----ITWNELCHVAETMSRGLSYLHEDVP 133
Query: 631 -------KPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDS--SNRTLVVGTYGYIA 681
KPSI HRD A +ADFGLA P + VGT Y+A
Sbjct: 134 WCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMA 193
Query: 682 PE-----LAYTMAVTEKCDVYSFGVVALEVLMGSHPTD 714
PE + + + D+Y+ G+V E++ D
Sbjct: 194 PEVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAAD 231
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 90/197 (45%), Gaps = 18/197 (9%)
Query: 516 IGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
IG G +G+VY A+ + + ++VA+KK+ S + + E R L ++RH N ++ G
Sbjct: 23 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 82
Query: 575 FCLHNKCMFLIYEYM--ERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKP 632
L +L+ EY L V + ++ VE+ + L+YLH
Sbjct: 83 CYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEI-----AAVTHGALQGLAYLH---SH 134
Query: 633 SIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYTMAVTE 692
+++HRD + DFG A ++ P + VGT ++APE+ M +
Sbjct: 135 NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANX----FVGTPYWMAPEVILAMDEGQ 190
Query: 693 ---KCDVYSFGVVALEV 706
K DV+S G+ +E+
Sbjct: 191 YDGKVDVWSLGITCIEL 207
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 95/225 (42%), Gaps = 36/225 (16%)
Query: 516 IGTGGYGSVYRAQL--------SSGKLVALKKLHRSETEEPAFLESFQTEARLLSQI-RH 566
+G G +G V A+ VA+K L TE+ L +E ++ I +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD--LSDLVSEMEMMKMIGKH 100
Query: 567 RNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLR-------------NDVEAVELDWTKRV 613
+NI+ L G C + +++I Y +G+L LR N V ++ + V
Sbjct: 101 KNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 614 NIVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLL-----HPDSS 668
+ +A + YL +HRD +ADFGLAR + + ++
Sbjct: 161 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 669 NRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHP 712
N L V ++APE + T + DV+SFGV+ E+ +G P
Sbjct: 218 NGRLPV---KWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 90/211 (42%), Gaps = 16/211 (7%)
Query: 511 HIKYCIGTGGYGSVYRAQL--SSGKLV--ALKKLHRSETEEPAFLESFQTEARLLSQIRH 566
H IG G +G VY L + GK + A+K L+R + + F TE ++ H
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSH 90
Query: 567 RNIVKLYGFCLHNK-CMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSY 625
N++ L G CL ++ ++ YM+ G L +RN+ + + +A + Y
Sbjct: 91 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKY 148
Query: 626 LHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDS----SNRTLVVGTYGYIA 681
L VHRD VADFGLAR ++ N+T ++A
Sbjct: 149 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 205
Query: 682 PELAYTMAVTEKCDVYSFGVVALEVLMGSHP 712
E T T K DV+SFGV+ E++ P
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 106/237 (44%), Gaps = 31/237 (13%)
Query: 489 FSIWNYDGRITFEEMIEATED-----FHIKYCIGTGGYGSVYR-AQLSSGKLVALKKL-- 540
F IW + + + +E D + I +GTG +G V+R + ++G A K +
Sbjct: 31 FDIW----KQYYPQPVEIKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMT 86
Query: 541 -HRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLR 599
H S+ E + + E + +S +RH +V L+ + M +IYE+M G LF +
Sbjct: 87 PHESDKE------TVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVA 140
Query: 600 ND----VEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVA 655
++ E +++ ++V H +Y+H D KP + E +
Sbjct: 141 DEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENI-------MFTTKRSNELKLI 193
Query: 656 DFGLARLLHPDSSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHP 712
DFGL L P S + + GT + APE+A V D++S GV++ +L G P
Sbjct: 194 DFGLTAHLDPKQSVK-VTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSP 249
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 88/202 (43%), Gaps = 10/202 (4%)
Query: 515 CIGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLY 573
IG G + V A+ + +GK VA+K + +++ + + F+ E R++ + H NIVKL+
Sbjct: 14 TIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLF 72
Query: 574 GFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPS 633
K ++L+ EY G +F L V W K +S + Y +
Sbjct: 73 EVIETEKTLYLVMEYASGGEVFDYL------VAHGWMKEKEARAKFRQIVSAVQYCHQKF 126
Query: 634 IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYTMAVT-E 692
IVHRD +ADFG + + T G+ Y APEL
Sbjct: 127 IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTF-CGSPPYAAPELFQGKKYDGP 185
Query: 693 KCDVYSFGVVALEVLMGSHPTD 714
+ DV+S GV+ ++ GS P D
Sbjct: 186 EVDVWSLGVILYTLVSGSLPFD 207
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 106/237 (44%), Gaps = 31/237 (13%)
Query: 489 FSIWNYDGRITFEEMIEATED-----FHIKYCIGTGGYGSVYR-AQLSSGKLVALKKL-- 540
F IW + + + +E D + I +GTG +G V+R + ++G A K +
Sbjct: 137 FDIW----KQYYPQPVEIKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMT 192
Query: 541 -HRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLR 599
H S+ E + + E + +S +RH +V L+ + M +IYE+M G LF +
Sbjct: 193 PHESDKE------TVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVA 246
Query: 600 ND----VEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVA 655
++ E +++ ++V H +Y+H D KP + E +
Sbjct: 247 DEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENI-------MFTTKRSNELKLI 299
Query: 656 DFGLARLLHPDSSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHP 712
DFGL L P S + + GT + APE+A V D++S GV++ +L G P
Sbjct: 300 DFGLTAHLDPKQSVK-VTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSP 355
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 86/198 (43%), Gaps = 7/198 (3%)
Query: 516 IGTGGYGSVYR-AQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
+G GG+ + + + ++ A K + +S +P E E + + H+++V +G
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 575 FCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSI 634
F N +F++ E R SL + + E + ++ + YLH + +
Sbjct: 89 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEAR---YYLRQIVLGCQYLHRN---RV 142
Query: 635 VHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYTMAVTEKC 694
+HRD E + DFGLA + D + + GT YIAPE+ + +
Sbjct: 143 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEV 202
Query: 695 DVYSFGVVALEVLMGSHP 712
DV+S G + +L+G P
Sbjct: 203 DVWSIGCIMYTLLVGKPP 220
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 94/202 (46%), Gaps = 17/202 (8%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLES-FQTEARLLSQIRHRNIVKLY 573
+G+G + V+ Q +GKL ALK + +S PAF +S + E +L +I+H NIV L
Sbjct: 17 LGSGAFSEVFLVKQRLTGKLFALKCIKKS----PAFRDSSLENEIAVLKKIKHENIVTLE 72
Query: 574 GFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPS 633
+L+ + + G LF + E D + +++ + A+ YLH +
Sbjct: 73 DIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASL---VIQQVLSAVKYLHEN---G 126
Query: 634 IVHRDXXXXXXXXXXXXE---AFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYTMAV 690
IVHRD E + DFGL+++ + + GT GY+APE+
Sbjct: 127 IVHRDLKPENLLYLTPEENSKIMITDFGLSKM--EQNGIMSTACGTPGYVAPEVLAQKPY 184
Query: 691 TEKCDVYSFGVVALEVLMGSHP 712
++ D +S GV+ +L G P
Sbjct: 185 SKAVDCWSIGVITYILLCGYPP 206
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 86/198 (43%), Gaps = 7/198 (3%)
Query: 516 IGTGGYGSVYR-AQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
+G GG+ + + + ++ A K + +S +P E E + + H+++V +G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 575 FCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSI 634
F N +F++ E R SL + + E + ++ + YLH + +
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEAR---YYLRQIVLGCQYLHRN---RV 138
Query: 635 VHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYTMAVTEKC 694
+HRD E + DFGLA + D + + GT YIAPE+ + +
Sbjct: 139 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEV 198
Query: 695 DVYSFGVVALEVLMGSHP 712
DV+S G + +L+G P
Sbjct: 199 DVWSIGCIMYTLLVGKPP 216
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 90/211 (42%), Gaps = 16/211 (7%)
Query: 511 HIKYCIGTGGYGSVYRAQL--SSGKLV--ALKKLHRSETEEPAFLESFQTEARLLSQIRH 566
H IG G +G VY L + GK + A+K L+R + + F TE ++ H
Sbjct: 25 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSH 82
Query: 567 RNIVKLYGFCLHNK-CMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSY 625
N++ L G CL ++ ++ YM+ G L +RN+ + + +A + Y
Sbjct: 83 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--DLIGFGLQVAKGMKY 140
Query: 626 LHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDS----SNRTLVVGTYGYIA 681
L VHRD VADFGLAR ++ N+T ++A
Sbjct: 141 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 197
Query: 682 PELAYTMAVTEKCDVYSFGVVALEVLMGSHP 712
E T T K DV+SFGV+ E++ P
Sbjct: 198 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 228
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 86/198 (43%), Gaps = 7/198 (3%)
Query: 516 IGTGGYGSVYR-AQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
+G GG+ + + + ++ A K + +S +P E E + + H+++V +G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 575 FCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSI 634
F N +F++ E R SL + + E + ++ + YLH + +
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEAR---YYLRQIVLGCQYLHRN---RV 138
Query: 635 VHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYTMAVTEKC 694
+HRD E + DFGLA + D + + GT YIAPE+ + +
Sbjct: 139 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEV 198
Query: 695 DVYSFGVVALEVLMGSHP 712
DV+S G + +L+G P
Sbjct: 199 DVWSIGCIMYTLLVGKPP 216
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 98/211 (46%), Gaps = 13/211 (6%)
Query: 508 EDFHIKYCIGTGGYGSVYRAQ----LSSGKLVALKKLHRSETEEPAFLESF-QTEARLLS 562
E F + +G GGYG V++ + ++GK+ A+K L ++ A + + E +L
Sbjct: 17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILE 76
Query: 563 QIRHRNIVKL-YGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAH 621
+++H IV L Y F K ++LI EY+ G LF L E + ++ T + + ++
Sbjct: 77 EVKHPFIVDLIYAFQTGGK-LYLILEYLSGGELFMQLER--EGIFMEDTACFYLAE-ISM 132
Query: 622 ALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIA 681
AL +LH + I++RD + DFGL + D + GT Y+A
Sbjct: 133 ALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMA 189
Query: 682 PELAYTMAVTEKCDVYSFGVVALEVLMGSHP 712
PE+ D +S G + ++L G+ P
Sbjct: 190 PEILMRSGHNRAVDWWSLGALMYDMLTGAPP 220
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 95/207 (45%), Gaps = 13/207 (6%)
Query: 510 FHIKYCIGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRN 568
F K +GTG + V A+ ++GKL A+K + + + S + E +L +I+H N
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKE--SSIENEIAVLRKIKHEN 81
Query: 569 IVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHY 628
IV L ++L+ + + G LF + E D + +++ + A+ YLH
Sbjct: 82 IVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDAS---TLIRQVLDAVYYLH- 137
Query: 629 DCKPSIVHRDXXXXXXXXXXXXEA---FVADFGLARLLHPDSSNRTLVVGTYGYIAPELA 685
+ IVHRD E ++DFGL+++ T GT GY+APE+
Sbjct: 138 --RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMST-ACGTPGYVAPEVL 194
Query: 686 YTMAVTEKCDVYSFGVVALEVLMGSHP 712
++ D +S GV+A +L G P
Sbjct: 195 AQKPYSKAVDCWSIGVIAYILLCGYPP 221
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 90/211 (42%), Gaps = 16/211 (7%)
Query: 511 HIKYCIGTGGYGSVYRAQL--SSGKLV--ALKKLHRSETEEPAFLESFQTEARLLSQIRH 566
H IG G +G VY L + GK + A+K L+R + + F TE ++ H
Sbjct: 30 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSH 87
Query: 567 RNIVKLYGFCLHNK-CMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSY 625
N++ L G CL ++ ++ YM+ G L +RN+ + + +A + Y
Sbjct: 88 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKY 145
Query: 626 LHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDS----SNRTLVVGTYGYIA 681
L VHRD VADFGLAR ++ N+T ++A
Sbjct: 146 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 202
Query: 682 PELAYTMAVTEKCDVYSFGVVALEVLMGSHP 712
E T T K DV+SFGV+ E++ P
Sbjct: 203 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 233
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 90/211 (42%), Gaps = 16/211 (7%)
Query: 511 HIKYCIGTGGYGSVYRAQL--SSGKLV--ALKKLHRSETEEPAFLESFQTEARLLSQIRH 566
H IG G +G VY L + GK + A+K L+R + + F TE ++ H
Sbjct: 31 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSH 88
Query: 567 RNIVKLYGFCLHNK-CMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSY 625
N++ L G CL ++ ++ YM+ G L +RN+ + + +A + Y
Sbjct: 89 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKY 146
Query: 626 LHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDS----SNRTLVVGTYGYIA 681
L VHRD VADFGLAR ++ N+T ++A
Sbjct: 147 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 203
Query: 682 PELAYTMAVTEKCDVYSFGVVALEVLMGSHP 712
E T T K DV+SFGV+ E++ P
Sbjct: 204 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 98/211 (46%), Gaps = 13/211 (6%)
Query: 508 EDFHIKYCIGTGGYGSVYRAQ----LSSGKLVALKKLHRSETEEPAFLESF-QTEARLLS 562
E F + +G GGYG V++ + ++GK+ A+K L ++ A + + E +L
Sbjct: 17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILE 76
Query: 563 QIRHRNIVKL-YGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAH 621
+++H IV L Y F K ++LI EY+ G LF L E + ++ T + + ++
Sbjct: 77 EVKHPFIVDLIYAFQTGGK-LYLILEYLSGGELFMQLER--EGIFMEDTACFYLAE-ISM 132
Query: 622 ALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIA 681
AL +LH + I++RD + DFGL + D + GT Y+A
Sbjct: 133 ALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCGTIEYMA 189
Query: 682 PELAYTMAVTEKCDVYSFGVVALEVLMGSHP 712
PE+ D +S G + ++L G+ P
Sbjct: 190 PEILMRSGHNRAVDWWSLGALMYDMLTGAPP 220
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 90/211 (42%), Gaps = 16/211 (7%)
Query: 511 HIKYCIGTGGYGSVYRAQL--SSGKLV--ALKKLHRSETEEPAFLESFQTEARLLSQIRH 566
H IG G +G VY L + GK + A+K L+R + + F TE ++ H
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSH 90
Query: 567 RNIVKLYGFCLHNK-CMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSY 625
N++ L G CL ++ ++ YM+ G L +RN+ + + +A + Y
Sbjct: 91 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKY 148
Query: 626 LHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDS----SNRTLVVGTYGYIA 681
L VHRD VADFGLAR ++ N+T ++A
Sbjct: 149 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 205
Query: 682 PELAYTMAVTEKCDVYSFGVVALEVLMGSHP 712
E T T K DV+SFGV+ E++ P
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 95/208 (45%), Gaps = 13/208 (6%)
Query: 510 FHIKYCIGTGGYGSVYRAQLSSG----KLVALKKLHRSETEEPAFLESFQTEARLLSQIR 565
F + +G G +G V+ + SG +L A+K L ++ + + + + E +L ++
Sbjct: 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRT-KMERDILVEVN 84
Query: 566 HRNIVKL-YGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALS 624
H IVKL Y F K ++LI +++ G LF L +V E D + +A AL
Sbjct: 85 HPFIVKLHYAFQTEGK-LYLILDFLRGGDLFTRLSKEVMFTEEDVK---FYLAELALALD 140
Query: 625 YLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPEL 684
+LH I++RD + DFGL++ GT Y+APE+
Sbjct: 141 HLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEV 197
Query: 685 AYTMAVTEKCDVYSFGVVALEVLMGSHP 712
T+ D +SFGV+ E+L G+ P
Sbjct: 198 VNRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 95/208 (45%), Gaps = 13/208 (6%)
Query: 510 FHIKYCIGTGGYGSVYRAQLSSG----KLVALKKLHRSETEEPAFLESFQTEARLLSQIR 565
F + +G G +G V+ + SG +L A+K L ++ + + + + E +L ++
Sbjct: 27 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRT-KMERDILVEVN 85
Query: 566 HRNIVKL-YGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALS 624
H IVKL Y F K ++LI +++ G LF L +V E D + +A AL
Sbjct: 86 HPFIVKLHYAFQTEGK-LYLILDFLRGGDLFTRLSKEVMFTEEDVK---FYLAELALALD 141
Query: 625 YLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPEL 684
+LH I++RD + DFGL++ GT Y+APE+
Sbjct: 142 HLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEV 198
Query: 685 AYTMAVTEKCDVYSFGVVALEVLMGSHP 712
T+ D +SFGV+ E+L G+ P
Sbjct: 199 VNRRGHTQSADWWSFGVLMFEMLTGTLP 226
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 87/198 (43%), Gaps = 7/198 (3%)
Query: 516 IGTGGYGSVYR-AQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
+G GG+ + + + ++ A K + +S +P E E + + H+++V +G
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 575 FCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSI 634
F N +F++ E R SL + + E + ++ + YLH + +
Sbjct: 83 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEAR---YYLRQIVLGCQYLHRN---RV 136
Query: 635 VHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYTMAVTEKC 694
+HRD E + DFGLA + D + ++ GT YIAPE+ + +
Sbjct: 137 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEV 196
Query: 695 DVYSFGVVALEVLMGSHP 712
DV+S G + +L+G P
Sbjct: 197 DVWSIGCIMYTLLVGKPP 214
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 90/211 (42%), Gaps = 16/211 (7%)
Query: 511 HIKYCIGTGGYGSVYRAQL--SSGKLV--ALKKLHRSETEEPAFLESFQTEARLLSQIRH 566
H IG G +G VY L + GK + A+K L+R + + F TE ++ H
Sbjct: 32 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSH 89
Query: 567 RNIVKLYGFCLHNK-CMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSY 625
N++ L G CL ++ ++ YM+ G L +RN+ + + +A + Y
Sbjct: 90 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKY 147
Query: 626 LHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDS----SNRTLVVGTYGYIA 681
L VHRD VADFGLAR ++ N+T ++A
Sbjct: 148 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 204
Query: 682 PELAYTMAVTEKCDVYSFGVVALEVLMGSHP 712
E T T K DV+SFGV+ E++ P
Sbjct: 205 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 95/208 (45%), Gaps = 13/208 (6%)
Query: 510 FHIKYCIGTGGYGSVYRAQLSSG----KLVALKKLHRSETEEPAFLESFQTEARLLSQIR 565
F + +G G +G V+ + SG +L A+K L ++ + + + + E +L ++
Sbjct: 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRT-KMERDILVEVN 84
Query: 566 HRNIVKL-YGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALS 624
H IVKL Y F K ++LI +++ G LF L +V E D + +A AL
Sbjct: 85 HPFIVKLHYAFQTEGK-LYLILDFLRGGDLFTRLSKEVMFTEEDVK---FYLAELALALD 140
Query: 625 YLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPEL 684
+LH I++RD + DFGL++ GT Y+APE+
Sbjct: 141 HLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEV 197
Query: 685 AYTMAVTEKCDVYSFGVVALEVLMGSHP 712
T+ D +SFGV+ E+L G+ P
Sbjct: 198 VNRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 90/211 (42%), Gaps = 16/211 (7%)
Query: 511 HIKYCIGTGGYGSVYRAQL--SSGKLV--ALKKLHRSETEEPAFLESFQTEARLLSQIRH 566
H IG G +G VY L + GK + A+K L+R + + F TE ++ H
Sbjct: 28 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSH 85
Query: 567 RNIVKLYGFCLHNK-CMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSY 625
N++ L G CL ++ ++ YM+ G L +RN+ + + +A + Y
Sbjct: 86 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKY 143
Query: 626 LHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDS----SNRTLVVGTYGYIA 681
L VHRD VADFGLAR ++ N+T ++A
Sbjct: 144 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 200
Query: 682 PELAYTMAVTEKCDVYSFGVVALEVLMGSHP 712
E T T K DV+SFGV+ E++ P
Sbjct: 201 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 231
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 104/241 (43%), Gaps = 44/241 (18%)
Query: 496 GRITFEEMIEATEDFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQ 555
G F ++++AT FH+K G GY +V A+K L E P+ L
Sbjct: 32 GEGEFGKVVKATA-FHLK---GRAGYTTV-----------AVKML--KENASPSELRDLL 74
Query: 556 TEARLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLR---------------- 599
+E +L Q+ H +++KLYG C + + LI EY + GSL LR
Sbjct: 75 SEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSR 134
Query: 600 -----NDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFV 654
+ + L ++ ++ + YL + +VHRD + +
Sbjct: 135 NSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKI 191
Query: 655 ADFGLARLLHPDSSNRTLVVGT--YGYIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSH 711
+DFGL+R ++ + S G ++A E + T + DV+SFGV+ E++ +G +
Sbjct: 192 SDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGN 251
Query: 712 P 712
P
Sbjct: 252 P 252
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 101/228 (44%), Gaps = 38/228 (16%)
Query: 509 DFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHR 567
DF +G G +G V +A+ + + A+KK+ +E + L + +E LL+ + H+
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEK----LSTILSEVXLLASLNHQ 62
Query: 568 NIVKLYGFCLHNK-------------CMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVN 614
+V+ Y L + +F+ EY E +L+ ++ ++ + D R
Sbjct: 63 YVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWR-- 120
Query: 615 IVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLH---------- 664
+ + + ALSY+H I+HR+ + DFGLA+ +H
Sbjct: 121 LFRQILEALSYIH---SQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDS 177
Query: 665 ---PDSS-NRTLVVGTYGYIAPE-LAYTMAVTEKCDVYSFGVVALEVL 707
P SS N T +GT Y+A E L T EK D YS G++ E +
Sbjct: 178 QNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|2OMT|A Chain A, Crystal Structure Of Inla G194s+sHEC1 COMPLEX
Length = 462
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 86/266 (32%), Positives = 125/266 (46%), Gaps = 27/266 (10%)
Query: 31 LSGRMPSEIGALS---KLEKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTGTIPSEX 87
LS S+I ALS L++L S N +T P + L+ L+ LD+S N+++ S
Sbjct: 136 LSSNTISDISALSGLTSLQQLSFSSNQVTDLKP--LANLTTLERLDISSNKVSDI--SVL 191
Query: 88 XXXXXXXXXXXXXXXXXXXXPLEFGNLKDLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLS 147
PL G L +LD+L L GN+L + ++ +LTNLT LDL+
Sbjct: 192 AKLTNLESLIATNNQISDITPL--GILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLA 247
Query: 148 LNQLSGRLPQEVGNLKNLKSLFLDNNHLSGPIPSTLYHLNQLATLCLGYNKL--VGPVTK 205
NQ+S P + L L L L N +S P L L L L L N+L + P++
Sbjct: 248 NNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISPIS- 302
Query: 206 EVGNMKNLDRLHLNGNNLTGSIPSTIGYLNLLDELHLSHNRLDGPIPPTIGNLTNLIALD 265
N+KNL L L NN++ P + L L L +N++ ++ NLTN+ L
Sbjct: 303 ---NLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLS 355
Query: 266 LSSNQLSGLLPREVGNLKYLASLSLN 291
NQ+S L P + NL + L LN
Sbjct: 356 AGHNQISDLTP--LANLTRITQLGLN 379
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 94/201 (46%), Gaps = 32/201 (15%)
Query: 113 NLKDLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNLKSLFLDN 172
NL L + + N++ + P + NLTNLT L L NQ++ P + NL NL L L +
Sbjct: 83 NLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSS 138
Query: 173 NHLSGPIPSTLYHLNQLATLCLGYNKLVGPVTKEVGNMKNLDRLHLNGN----------- 221
N +S S L L L L N++ K + N+ L+RL ++ N
Sbjct: 139 NTISDI--SALSGLTSLQQLSFSSNQVTD--LKPLANLTTLERLDISSNKVSDISVLAKL 194
Query: 222 -NLTGSIPST--------IGYLNLLDELHLSHNRLDGPIPPTIGNLTNLIALDLSSNQLS 272
NL I + +G L LDEL L+ N+L T+ +LTNL LDL++NQ+S
Sbjct: 195 TNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQIS 252
Query: 273 GLLPREVGNLKYLASLSLNGN 293
L P + L L L L N
Sbjct: 253 NLAP--LSGLTKLTELKLGAN 271
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 83/160 (51%), Gaps = 11/160 (6%)
Query: 116 DLDQLR-LQGNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNLKSLFLDNNH 174
DLDQ+ LQ ++L + L NLT ++ S NQL+ P + NL L + ++NN
Sbjct: 39 DLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQ 96
Query: 175 LSGPIPSTLYHLNQLATLCLGYNKLVGPVTKEVGNMKNLDRLHLNGNNLTGSIPSTIGYL 234
++ P L +L L L L N++ + N+ NL+RL L+ N T S S + L
Sbjct: 97 IADITP--LANLTNLTGLTLFNNQITD--IDPLKNLTNLNRLELSSN--TISDISALSGL 150
Query: 235 NLLDELHLSHNRLDGPIPPTIGNLTNLIALDLSSNQLSGL 274
L +L S N++ P + NLT L LD+SSN++S +
Sbjct: 151 TSLQQLSFSSNQVTDLKP--LANLTTLERLDISSNKVSDI 188
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 97/208 (46%), Gaps = 31/208 (14%)
Query: 519 GGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLS--QIRHRNIVKLYGFC 576
G +G V++AQL + + VA+K + + S+Q E + S ++H NI++ G
Sbjct: 35 GRFGCVWKAQLLN-EYVAVKIFPIQDKQ------SWQNEYEVYSLPGMKHENILQFIGAE 87
Query: 577 LHNKC----MFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDC-- 630
++LI + E+GSL L+ +V + W + +I ++MA L+YLH D
Sbjct: 88 KRGTSVDVDLWLITAFHEKGSLSDFLKANV----VSWNELCHIAETMARGLAYLHEDIPG 143
Query: 631 -----KPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSS--NRTLVVGTYGYIAPE 683
KP+I HRD A +ADFGLA S + VGT Y+APE
Sbjct: 144 LKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPE 203
Query: 684 -----LAYTMAVTEKCDVYSFGVVALEV 706
+ + + D+Y+ G+V E+
Sbjct: 204 VLEGAINFQRDAFLRIDMYAMGLVLWEL 231
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 94/210 (44%), Gaps = 14/210 (6%)
Query: 506 ATEDFHIKYCIGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEA--RLLS 562
AT + IG G YG+VY+A+ SG VALK + EE + + + A R L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 563 QIRHRNIVKLYGFCLHNKC-----MFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVK 617
H N+V+L C ++ + L++E++++ + + + + K ++++
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIK--DLMR 119
Query: 618 SMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTY 677
L +LH +C IVHRD +ADFGLAR+ + +VV T
Sbjct: 120 QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVV-TL 175
Query: 678 GYIAPELAYTMAVTEKCDVYSFGVVALEVL 707
Y APE+ D++S G + E+
Sbjct: 176 WYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 94/210 (44%), Gaps = 14/210 (6%)
Query: 506 ATEDFHIKYCIGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEA--RLLS 562
AT + IG G YG+VY+A+ SG VALK + EE + + + A R L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 563 QIRHRNIVKLYGFCLHNKC-----MFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVK 617
H N+V+L C ++ + L++E++++ + + + + K ++++
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIK--DLMR 119
Query: 618 SMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTY 677
L +LH +C IVHRD +ADFGLAR+ + +VV T
Sbjct: 120 QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVVV-TL 175
Query: 678 GYIAPELAYTMAVTEKCDVYSFGVVALEVL 707
Y APE+ D++S G + E+
Sbjct: 176 WYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 95/220 (43%), Gaps = 30/220 (13%)
Query: 516 IGTGGYGSVYRA-QLSSGK-----LVALKKLHRSETEEPAFLESFQTEARLLSQI-RHRN 568
+G G +G V A GK VA+K L + + E+ +E +++S + +H N
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEK--EALMSELKIMSHLGQHEN 111
Query: 569 IVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHY 628
IV L G C H + +I EY G L LR +E D I S A LH+
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETD--PAFAIANSTASTRDLLHF 169
Query: 629 DCK----------PSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSS-----NRTLV 673
+ + +HRD A + DFGLAR + DS+ N L
Sbjct: 170 SSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLP 229
Query: 674 VGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHP 712
V ++APE + T + DV+S+G++ E+ +G +P
Sbjct: 230 V---KWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNP 266
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 95/207 (45%), Gaps = 13/207 (6%)
Query: 510 FHIKYCIGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRN 568
+ + +GTG + V A+ + KLVA+K + + E S + E +L +I+H N
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKE--GSMENEIAVLHKIKHPN 77
Query: 569 IVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHY 628
IV L ++LI + + G LF + E D ++ ++ + A+ YLH
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR---LIFQVLDAVKYLH- 133
Query: 629 DCKPSIVHRDXXXXXXXXXXXXEA---FVADFGLARLLHPDSSNRTLVVGTYGYIAPELA 685
IVHRD E ++DFGL+++ P S T GT GY+APE+
Sbjct: 134 --DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLST-ACGTPGYVAPEVL 190
Query: 686 YTMAVTEKCDVYSFGVVALEVLMGSHP 712
++ D +S GV+A +L G P
Sbjct: 191 AQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 95/207 (45%), Gaps = 13/207 (6%)
Query: 510 FHIKYCIGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRN 568
+ + +GTG + V A+ + KLVA+K + + E S + E +L +I+H N
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKE--GSMENEIAVLHKIKHPN 77
Query: 569 IVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHY 628
IV L ++LI + + G LF + E D ++ ++ + A+ YLH
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR---LIFQVLDAVKYLH- 133
Query: 629 DCKPSIVHRDXXXXXXXXXXXXEA---FVADFGLARLLHPDSSNRTLVVGTYGYIAPELA 685
IVHRD E ++DFGL+++ P S T GT GY+APE+
Sbjct: 134 --DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLST-ACGTPGYVAPEVL 190
Query: 686 YTMAVTEKCDVYSFGVVALEVLMGSHP 712
++ D +S GV+A +L G P
Sbjct: 191 AQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 105/241 (43%), Gaps = 44/241 (18%)
Query: 496 GRITFEEMIEATEDFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQ 555
G F ++++AT FH+K G GY +V A+K L E P+ L
Sbjct: 32 GEGEFGKVVKATA-FHLK---GRAGYTTV-----------AVKML--KENASPSELRDLL 74
Query: 556 TEARLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLR---------------- 599
+E +L Q+ H +++KLYG C + + LI EY + GSL LR
Sbjct: 75 SEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSR 134
Query: 600 -----NDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFV 654
+ + L ++ ++ + YL + +VHRD + +
Sbjct: 135 NSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKI 191
Query: 655 ADFGLARLLHPDSS--NRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSH 711
+DFGL+R ++ + S R+ ++A E + T + DV+SFGV+ E++ +G +
Sbjct: 192 SDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGN 251
Query: 712 P 712
P
Sbjct: 252 P 252
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 92/209 (44%), Gaps = 11/209 (5%)
Query: 508 EDFHIKYCIGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRH 566
EDF +G G + +V A +L++ + A+K L + + + E ++S++ H
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 96
Query: 567 RNIVKLYGFCLHN-KCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSY 625
VKLY FC + + ++ Y + G L +R D T + AL Y
Sbjct: 97 PFFVKLY-FCFQDDEKLYFGLSYAKNGELLKYIRK---IGSFDETCTRFYTAEIVSALEY 152
Query: 626 LHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDS--SNRTLVVGTYGYIAPE 683
LH I+HRD + DFG A++L P+S + VGT Y++PE
Sbjct: 153 LH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 209
Query: 684 LAYTMAVTEKCDVYSFGVVALEVLMGSHP 712
L + + D+++ G + +++ G P
Sbjct: 210 LLTEKSACKSSDLWALGCIIYQLVAGLPP 238
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 92/211 (43%), Gaps = 16/211 (7%)
Query: 511 HIKYCIGTGGYGSVYRAQL--SSGKLV--ALKKLHRSETEEPAFLESFQTEARLLSQIRH 566
H IG G +G VY L + GK + A+K L+R + + F TE ++ H
Sbjct: 34 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSH 91
Query: 567 RNIVKLYGFCLHNK-CMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSY 625
N++ L G CL ++ ++ YM+ G L +RN+ + + +A + +
Sbjct: 92 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKF 149
Query: 626 LHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHP---DS-SNRTLVVGTYGYIA 681
L VHRD VADFGLAR ++ DS N+T ++A
Sbjct: 150 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 206
Query: 682 PELAYTMAVTEKCDVYSFGVVALEVLMGSHP 712
E T T K DV+SFGV+ E++ P
Sbjct: 207 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 92/211 (43%), Gaps = 16/211 (7%)
Query: 511 HIKYCIGTGGYGSVYRAQL--SSGKLV--ALKKLHRSETEEPAFLESFQTEARLLSQIRH 566
H IG G +G VY L + GK + A+K L+R + + F TE ++ H
Sbjct: 92 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSH 149
Query: 567 RNIVKLYGFCLHNK-CMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSY 625
N++ L G CL ++ ++ YM+ G L +RN+ + + +A + +
Sbjct: 150 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKF 207
Query: 626 LHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHP---DS-SNRTLVVGTYGYIA 681
L VHRD VADFGLAR ++ DS N+T ++A
Sbjct: 208 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 264
Query: 682 PELAYTMAVTEKCDVYSFGVVALEVLMGSHP 712
E T T K DV+SFGV+ E++ P
Sbjct: 265 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 295
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 91/203 (44%), Gaps = 16/203 (7%)
Query: 516 IGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
+G+G YG V + +G A+K + +S + + E +L Q+ H NI+KLY
Sbjct: 12 LGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYE 71
Query: 575 FCLHNKCMFLIYEYMERGSLF--CVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKP 632
F + +L+ E G LF +LR V+ I+K + +YLH K
Sbjct: 72 FFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDA-----AVIMKQVLSGTTYLH---KH 123
Query: 633 SIVHRDXX-XXXXXXXXXXEAF--VADFGLARLLHPDSSNRTLVVGTYGYIAPELAYTMA 689
+IVHRD +A + DFGL+ + +GT YIAPE+
Sbjct: 124 NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKER-LGTAYYIAPEV-LRKK 181
Query: 690 VTEKCDVYSFGVVALEVLMGSHP 712
EKCDV+S GV+ +L G P
Sbjct: 182 YDEKCDVWSCGVILYILLCGYPP 204
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 94/209 (44%), Gaps = 16/209 (7%)
Query: 505 EATEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQ 563
E E+F IG G YG VY+A+ +G++VALKK+ R +TE + E LL +
Sbjct: 7 EFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKE 65
Query: 564 IRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHAL 623
+ H NIVKL ++L++E++ + L+ ++A L I + L
Sbjct: 66 LNHPNIVKLLDVIHTENKLYLVFEFLHQD-----LKKFMDASALTGIPLPLIKSYLFQLL 120
Query: 624 SYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPE 683
L + ++HRD +ADFGLAR T V T Y APE
Sbjct: 121 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPE 180
Query: 684 L-----AYTMAVTEKCDVYSFGVVALEVL 707
+ Y+ AV D++S G + E++
Sbjct: 181 ILLGXKYYSTAV----DIWSLGCIFAEMV 205
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 94/209 (44%), Gaps = 16/209 (7%)
Query: 505 EATEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQ 563
E E+F IG G YG VY+A+ +G++VALKK+ R +TE + E LL +
Sbjct: 7 EFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKE 65
Query: 564 IRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHAL 623
+ H NIVKL ++L++E++ + L+ ++A L I + L
Sbjct: 66 LNHPNIVKLLDVIHTENKLYLVFEFLHQD-----LKKFMDASALTGIPLPLIKSYLFQLL 120
Query: 624 SYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPE 683
L + ++HRD +ADFGLAR T V T Y APE
Sbjct: 121 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPE 180
Query: 684 L-----AYTMAVTEKCDVYSFGVVALEVL 707
+ Y+ AV D++S G + E++
Sbjct: 181 ILLGCKYYSTAV----DIWSLGCIFAEMV 205
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 92/211 (43%), Gaps = 16/211 (7%)
Query: 511 HIKYCIGTGGYGSVYRAQL--SSGKLV--ALKKLHRSETEEPAFLESFQTEARLLSQIRH 566
H IG G +G VY L + GK + A+K L+R + + F TE ++ H
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSH 90
Query: 567 RNIVKLYGFCLHNK-CMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSY 625
N++ L G CL ++ ++ YM+ G L +RN+ + + +A + +
Sbjct: 91 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKF 148
Query: 626 LHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHP---DS-SNRTLVVGTYGYIA 681
L VHRD VADFGLAR ++ DS N+T ++A
Sbjct: 149 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 205
Query: 682 PELAYTMAVTEKCDVYSFGVVALEVLMGSHP 712
E T T K DV+SFGV+ E++ P
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 91/203 (44%), Gaps = 16/203 (7%)
Query: 516 IGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
+G+G YG V + +G A+K + +S + + E +L Q+ H NI+KLY
Sbjct: 29 LGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYE 88
Query: 575 FCLHNKCMFLIYEYMERGSLF--CVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKP 632
F + +L+ E G LF +LR V+ I+K + +YLH K
Sbjct: 89 FFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDA-----AVIMKQVLSGTTYLH---KH 140
Query: 633 SIVHRDXX-XXXXXXXXXXEAF--VADFGLARLLHPDSSNRTLVVGTYGYIAPELAYTMA 689
+IVHRD +A + DFGL+ + +GT YIAPE+
Sbjct: 141 NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKER-LGTAYYIAPEVL-RKK 198
Query: 690 VTEKCDVYSFGVVALEVLMGSHP 712
EKCDV+S GV+ +L G P
Sbjct: 199 YDEKCDVWSCGVILYILLCGYPP 221
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 92/211 (43%), Gaps = 16/211 (7%)
Query: 511 HIKYCIGTGGYGSVYRAQL--SSGKLV--ALKKLHRSETEEPAFLESFQTEARLLSQIRH 566
H IG G +G VY L + GK + A+K L+R + + F TE ++ H
Sbjct: 38 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSH 95
Query: 567 RNIVKLYGFCLHNK-CMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSY 625
N++ L G CL ++ ++ YM+ G L +RN+ + + +A + +
Sbjct: 96 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKF 153
Query: 626 LHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHP---DS-SNRTLVVGTYGYIA 681
L VHRD VADFGLAR ++ DS N+T ++A
Sbjct: 154 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 210
Query: 682 PELAYTMAVTEKCDVYSFGVVALEVLMGSHP 712
E T T K DV+SFGV+ E++ P
Sbjct: 211 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 241
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 92/211 (43%), Gaps = 16/211 (7%)
Query: 511 HIKYCIGTGGYGSVYRAQL--SSGKLV--ALKKLHRSETEEPAFLESFQTEARLLSQIRH 566
H IG G +G VY L + GK + A+K L+R + + F TE ++ H
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSH 90
Query: 567 RNIVKLYGFCLHNK-CMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSY 625
N++ L G CL ++ ++ YM+ G L +RN+ + + +A + +
Sbjct: 91 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKF 148
Query: 626 LHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHP---DS-SNRTLVVGTYGYIA 681
L VHRD VADFGLAR ++ DS N+T ++A
Sbjct: 149 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 205
Query: 682 PELAYTMAVTEKCDVYSFGVVALEVLMGSHP 712
E T T K DV+SFGV+ E++ P
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 95/207 (45%), Gaps = 13/207 (6%)
Query: 510 FHIKYCIGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRN 568
+ + +GTG + V A+ + KLVA+K + + E S + E +L +I+H N
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKE--GSMENEIAVLHKIKHPN 77
Query: 569 IVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHY 628
IV L ++LI + + G LF + E D ++ ++ + A+ YLH
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR---LIFQVLDAVKYLH- 133
Query: 629 DCKPSIVHRDXXXXXXXXXXXXEA---FVADFGLARLLHPDSSNRTLVVGTYGYIAPELA 685
IVHRD E ++DFGL+++ P S T GT GY+APE+
Sbjct: 134 --DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLST-ACGTPGYVAPEVL 190
Query: 686 YTMAVTEKCDVYSFGVVALEVLMGSHP 712
++ D +S GV+A +L G P
Sbjct: 191 AQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 92/208 (44%), Gaps = 9/208 (4%)
Query: 508 EDFHIKYCIGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRH 566
EDF +G G + +V A +L++ + A+K L + + + E ++S++ H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 567 RNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYL 626
VKLY ++ ++ Y + G C+L+ + D T + AL YL
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNG---CLLKYIRKIGSFDETCTRFYTAEIVSALEYL 148
Query: 627 HYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTL--VVGTYGYIAPEL 684
H I+HRD + DFG A++L P+S VGT Y++PEL
Sbjct: 149 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPEL 205
Query: 685 AYTMAVTEKCDVYSFGVVALEVLMGSHP 712
+ ++ D+++ G + +++ G P
Sbjct: 206 LTEKSASKSSDLWALGCIIYQLVAGLPP 233
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 93/222 (41%), Gaps = 30/222 (13%)
Query: 516 IGTGGYGSVYRAQ---LSSGK-----LVALKKLHRSETEEPAFLESFQTEARLLSQI-RH 566
+G G +G V A+ L K VA+K L TE+ L +E ++ I +H
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKD--LSDLISEMEMMKMIGKH 78
Query: 567 RNIVKLYGFCLHNKCMFLIYEYMERGSL-------------FCVLRNDVEAVELDWTKRV 613
+NI+ L G C + +++I EY +G+L +C + +L V
Sbjct: 79 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLV 138
Query: 614 NIVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLV 673
+ +A + YL +HRD +ADFGLAR +H +
Sbjct: 139 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 195
Query: 674 VGT--YGYIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHP 712
G ++APE + T + DV+SFGV+ E+ +G P
Sbjct: 196 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 237
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 93/222 (41%), Gaps = 30/222 (13%)
Query: 516 IGTGGYGSVYRAQ---LSSGK-----LVALKKLHRSETEEPAFLESFQTEARLLSQI-RH 566
+G G +G V A+ L K VA+K L TE+ L +E ++ I +H
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKD--LSDLISEMEMMKMIGKH 93
Query: 567 RNIVKLYGFCLHNKCMFLIYEYMERGSL-------------FCVLRNDVEAVELDWTKRV 613
+NI+ L G C + +++I EY +G+L +C + +L V
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLV 153
Query: 614 NIVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLV 673
+ +A + YL +HRD +ADFGLAR +H +
Sbjct: 154 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 210
Query: 674 VGT--YGYIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHP 712
G ++APE + T + DV+SFGV+ E+ +G P
Sbjct: 211 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 252
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 92/211 (43%), Gaps = 16/211 (7%)
Query: 511 HIKYCIGTGGYGSVYRAQL--SSGKLV--ALKKLHRSETEEPAFLESFQTEARLLSQIRH 566
H IG G +G VY L + GK + A+K L+R + + F TE ++ H
Sbjct: 31 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSH 88
Query: 567 RNIVKLYGFCLHNK-CMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSY 625
N++ L G CL ++ ++ YM+ G L +RN+ + + +A + +
Sbjct: 89 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKF 146
Query: 626 LHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHP---DS-SNRTLVVGTYGYIA 681
L VHRD VADFGLAR ++ DS N+T ++A
Sbjct: 147 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 203
Query: 682 PELAYTMAVTEKCDVYSFGVVALEVLMGSHP 712
E T T K DV+SFGV+ E++ P
Sbjct: 204 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 94/210 (44%), Gaps = 14/210 (6%)
Query: 506 ATEDFHIKYCIGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEA--RLLS 562
AT + IG G YG+VY+A+ SG VALK + EE + + + A R L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 563 QIRHRNIVKLYGFCLHNKC-----MFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVK 617
H N+V+L C ++ + L++E++++ + + + + K ++++
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIK--DLMR 119
Query: 618 SMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTY 677
L +LH +C IVHRD +ADFGLAR+ + +VV T
Sbjct: 120 QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVV-TL 175
Query: 678 GYIAPELAYTMAVTEKCDVYSFGVVALEVL 707
Y APE+ D++S G + E+
Sbjct: 176 WYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 95/207 (45%), Gaps = 13/207 (6%)
Query: 510 FHIKYCIGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRN 568
+ + +GTG + V A+ + KLVA+K + + E S + E +L +I+H N
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKE--GSMENEIAVLHKIKHPN 77
Query: 569 IVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHY 628
IV L ++LI + + G LF + E D ++ ++ + A+ YLH
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR---LIFQVLDAVKYLH- 133
Query: 629 DCKPSIVHRDXXXXXXXXXXXXEA---FVADFGLARLLHPDSSNRTLVVGTYGYIAPELA 685
IVHRD E ++DFGL+++ P S T GT GY+APE+
Sbjct: 134 --DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLST-ACGTPGYVAPEVL 190
Query: 686 YTMAVTEKCDVYSFGVVALEVLMGSHP 712
++ D +S GV+A +L G P
Sbjct: 191 AQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|2OMX|A Chain A, Crystal Structure Of Inla S192n G194s+sHEC1 COMPLEX
Length = 462
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 86/266 (32%), Positives = 125/266 (46%), Gaps = 27/266 (10%)
Query: 31 LSGRMPSEIGALS---KLEKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTGTIPSEX 87
LS S+I ALS L++L S N +T P + L+ L+ LD+S N+++ S
Sbjct: 136 LSSNTISDISALSGLTSLQQLNFSSNQVTDLKP--LANLTTLERLDISSNKVSDI--SVL 191
Query: 88 XXXXXXXXXXXXXXXXXXXXPLEFGNLKDLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLS 147
PL G L +LD+L L GN+L + ++ +LTNLT LDL+
Sbjct: 192 AKLTNLESLIATNNQISDITPL--GILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLA 247
Query: 148 LNQLSGRLPQEVGNLKNLKSLFLDNNHLSGPIPSTLYHLNQLATLCLGYNKL--VGPVTK 205
NQ+S P + L L L L N +S P L L L L L N+L + P++
Sbjct: 248 NNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISPIS- 302
Query: 206 EVGNMKNLDRLHLNGNNLTGSIPSTIGYLNLLDELHLSHNRLDGPIPPTIGNLTNLIALD 265
N+KNL L L NN++ P + L L L +N++ ++ NLTN+ L
Sbjct: 303 ---NLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLS 355
Query: 266 LSSNQLSGLLPREVGNLKYLASLSLN 291
NQ+S L P + NL + L LN
Sbjct: 356 AGHNQISDLTP--LANLTRITQLGLN 379
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 84/160 (52%), Gaps = 11/160 (6%)
Query: 116 DLDQLR-LQGNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNLKSLFLDNNH 174
DLDQ+ LQ ++L + L NLT ++ S NQL+ P + NL L + ++NN
Sbjct: 39 DLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQ 96
Query: 175 LSGPIPSTLYHLNQLATLCLGYNKLVGPVTKEVGNMKNLDRLHLNGNNLTGSIPSTIGYL 234
++ P L +L L L L N++ + N+ NL+RL L+ N T S S + L
Sbjct: 97 IADITP--LANLTNLTGLTLFNNQITD--IDPLKNLTNLNRLELSSN--TISDISALSGL 150
Query: 235 NLLDELHLSHNRLDGPIPPTIGNLTNLIALDLSSNQLSGL 274
L +L+ S N++ P + NLT L LD+SSN++S +
Sbjct: 151 TSLQQLNFSSNQVTDLKP--LANLTTLERLDISSNKVSDI 188
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 90/183 (49%), Gaps = 14/183 (7%)
Query: 111 FGNLKDLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNLKSLFL 170
NL +L L L N++ + P + NLTNL L+LS N +S + L +L+ L
Sbjct: 103 LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISDI--SALSGLTSLQQLNF 158
Query: 171 DNNHLSGPIPSTLYHLNQLATLCLGYNKLVGPVTKEVGNMKNLDRLHLNGNNLTGSIPST 230
+N ++ P L +L L L + NK+ + + NL+ L N ++ P
Sbjct: 159 SSNQVTDLKP--LANLTTLERLDISSNKVSD--ISVLAKLTNLESLIATNNQISDITP-- 212
Query: 231 IGYLNLLDELHLSHNRLDGPIPPTIGNLTNLIALDLSSNQLSGLLPREVGNLKYLASLSL 290
+G L LDEL L+ N+L T+ +LTNL LDL++NQ+S L P + L L L L
Sbjct: 213 LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKL 268
Query: 291 NGN 293
N
Sbjct: 269 GAN 271
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 102/239 (42%), Gaps = 23/239 (9%)
Query: 516 IGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGF 575
+G+G YG V + + K+ R + + E +L + H NI+KLY F
Sbjct: 45 LGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDF 104
Query: 576 CLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIV 635
+ +L+ E + G LF + + ++ E+D I+K + ++YLH K +IV
Sbjct: 105 FEDKRNYYLVMECYKGGELFDEIIHRMKFNEVD---AAVIIKQVLSGVTYLH---KHNIV 158
Query: 636 HRDXX-XXXXXXXXXXEAF--VADFGLARLLHPDSSNRTLVVGTYGYIAPELAYTMAVTE 692
HRD +A + DFGL+ + + +GT YIAPE+ E
Sbjct: 159 HRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKER-LGTAYYIAPEV-LRKKYDE 216
Query: 693 KCDVYSFGVVALEVLMGSHP----TDXXXXXXXXXGRKISQNPRLDLQCNAYLKNFSQG 747
KCDV+S GV+ +L G P TD G+ +P KN S+G
Sbjct: 217 KCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPE--------WKNVSEG 267
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 86/207 (41%), Gaps = 8/207 (3%)
Query: 508 EDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLS-QIR 565
EDF + +G G +G V+ A+ + + A+K L + +E E R+LS
Sbjct: 18 EDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWE 77
Query: 566 HRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSY 625
H + ++ + +F + EY+ G L +++ + D ++ + L +
Sbjct: 78 HPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQS---CHKFDLSRATFYAAEIILGLQF 134
Query: 626 LHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELA 685
LH IV+RD +ADFG+ + + GT YIAPE+
Sbjct: 135 LH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEIL 191
Query: 686 YTMAVTEKCDVYSFGVVALEVLMGSHP 712
D +SFGV+ E+L+G P
Sbjct: 192 LGQKYNHSVDWWSFGVLLYEMLIGQSP 218
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 84/196 (42%), Gaps = 9/196 (4%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
+G+G YGSV A SG+ VA+KKL R E F + E LL ++H N++ L
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSE-IFAKRAYRELLLLKHMQHENVIGLLD 108
Query: 575 FCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSI 634
+ Y++ + +E K +V M L Y+H +
Sbjct: 109 VFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIH---SAGV 165
Query: 635 VHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYT-MAVTEK 693
VHRD E + DFGLAR H D+ VV T Y APE+ + M +
Sbjct: 166 VHRDLKPGNLAVNEDCELKILDFGLAR--HADAEMTGYVV-TRWYRAPEVILSWMHYNQT 222
Query: 694 CDVYSFGVVALEVLMG 709
D++S G + E+L G
Sbjct: 223 VDIWSVGCIMAEMLTG 238
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 96/217 (44%), Gaps = 22/217 (10%)
Query: 508 EDFHIKYCIGTGGYGSVYRAQL-SSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRH 566
EDF I IG G +G V +L ++ K+ A+K L++ E + A F+ E +L
Sbjct: 74 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDS 133
Query: 567 RNIVKLYGFCLHNKCMFLIYEYMERGSLFCVL-----RNDVEAVELDWTKRVNIVKSMAH 621
+ I L+ + ++L+ +Y G L +L R E + V + S+ H
Sbjct: 134 KWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSV-H 192
Query: 622 ALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLA-RLLHPDSSNRTLVVGTYGYI 680
L Y+H D KP + D +ADFG +L+ + ++ VGT YI
Sbjct: 193 QLHYVHRDIKPDNILMDMNGHIR---------LADFGSCLKLMEDGTVQSSVAVGTPDYI 243
Query: 681 APELAYTMAVTE-----KCDVYSFGVVALEVLMGSHP 712
+PE+ M + +CD +S GV E+L G P
Sbjct: 244 SPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETP 280
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 97/223 (43%), Gaps = 38/223 (17%)
Query: 516 IGTGGYGSVYRAQ------LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNI 569
IG G +G V++A+ +VA+K L + + FQ EA L+++ + NI
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASAD--MQADFQREAALMAEFDNPNI 112
Query: 570 VKLYGFCLHNKCMFLIYEYMERGSLFCVLRN-------DVEAVELDWTKRVN-------- 614
VKL G C K M L++EYM G L LR+ + +L RV+
Sbjct: 113 VKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLS 172
Query: 615 ------IVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSS 668
I + +A ++YL + VHRD +ADFGL+R ++ S+
Sbjct: 173 CAEQLCIARQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGLSRNIY--SA 227
Query: 669 NRTLVVGTYG----YIAPELAYTMAVTEKCDVYSFGVVALEVL 707
+ G ++ PE + T + DV+++GVV E+
Sbjct: 228 DYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIF 270
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 111/255 (43%), Gaps = 45/255 (17%)
Query: 503 MIEATEDFHIKYCIGTGGYGSVYRAQLSSGKLV-ALKKLHRSETEE--PAFLESFQTEAR 559
++E + +H+K IG G YG V A + + + A+K +++++ + P +E +TE R
Sbjct: 21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVR 80
Query: 560 LLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLF-------------C---VLRNDV- 602
L+ ++ H NI +LY + + L+ E G L C V++ +
Sbjct: 81 LMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQIC 140
Query: 603 -------EAV---------ELDWTKRVNIVKS-MAHALSYLHYDCKPSIVHRDXX--XXX 643
EA+ LD+ +R ++ + M S LHY I HRD
Sbjct: 141 PCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFL 200
Query: 644 XXXXXXXEAFVADFGLARLLHP----DSSNRTLVVGTYGYIAPELAYTM--AVTEKCDVY 697
E + DFGL++ + + T GT ++APE+ T + KCD +
Sbjct: 201 FSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAW 260
Query: 698 SFGVVALEVLMGSHP 712
S GV+ +LMG+ P
Sbjct: 261 SAGVLLHLLLMGAVP 275
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 101/238 (42%), Gaps = 22/238 (9%)
Query: 488 EFSIWNYDGRITFEEMIEATEDFHIKYCIGTGGYGSVYRAQL-SSGKLVALKKLHRSETE 546
+F W + +E+ +DF I IG G + V ++ +G++ A+K +++ +
Sbjct: 41 DFLQWAEPIVVRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDML 100
Query: 547 EPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVE 606
+ + F+ E +L R I +L+ ++L+ EY G L +L E +
Sbjct: 101 KRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIP 160
Query: 607 LDWTK----RVNIVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARL 662
+ + + + H L Y+H D KP + D +ADFG
Sbjct: 161 AEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIR---------LADFGSCLK 211
Query: 663 LHPDSSNRTLV-VGTYGYIAPELAYTMAVTE-------KCDVYSFGVVALEVLMGSHP 712
L D + R+LV VGT Y++PE+ + +CD ++ GV A E+ G P
Sbjct: 212 LRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTP 269
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 97/214 (45%), Gaps = 17/214 (7%)
Query: 507 TEDFHIKYCIGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIR 565
ED+ + IG G +G V + S+ K+ A+K L + E + + F E +++
Sbjct: 68 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN 127
Query: 566 HRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRN-DV-EAVELDWTKRVNIVKSMAHAL 623
+V+L+ ++ ++++ EYM G L ++ N DV E +T V + H++
Sbjct: 128 SPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSM 187
Query: 624 SYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNR-TLVVGTYGYIAP 682
++H D KP + D +ADFG ++ + R VGT YI+P
Sbjct: 188 GFIHRDVKPDNMLLDKSGHLK---------LADFGTCMKMNKEGMVRCDTAVGTPDYISP 238
Query: 683 ELAYTMA----VTEKCDVYSFGVVALEVLMGSHP 712
E+ + +CD +S GV E+L+G P
Sbjct: 239 EVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 272
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 89/202 (44%), Gaps = 10/202 (4%)
Query: 515 CIGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLY 573
IG G + V A+ + +G+ VA+K + +++ P L+ E R++ + H NIVKL+
Sbjct: 19 TIGKGNFAKVKLARHILTGREVAIKIIDKTQLN-PTSLQKLFREVRIMKILNHPNIVKLF 77
Query: 574 GFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPS 633
K ++LI EY G +F L V + + + + + A+ Y H +
Sbjct: 78 EVIETEKTLYLIMEYASGGEVFDYL---VAHGRMKEKEARSKFRQIVSAVQYCH---QKR 131
Query: 634 IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYTMAVT-E 692
IVHRD +ADFG + T G+ Y APEL
Sbjct: 132 IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTF-CGSPPYAAPELFQGKKYDGP 190
Query: 693 KCDVYSFGVVALEVLMGSHPTD 714
+ DV+S GV+ ++ GS P D
Sbjct: 191 EVDVWSLGVILYTLVSGSLPFD 212
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 97/214 (45%), Gaps = 17/214 (7%)
Query: 507 TEDFHIKYCIGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIR 565
ED+ + IG G +G V + S+ K+ A+K L + E + + F E +++
Sbjct: 73 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN 132
Query: 566 HRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRN-DV-EAVELDWTKRVNIVKSMAHAL 623
+V+L+ ++ ++++ EYM G L ++ N DV E +T V + H++
Sbjct: 133 SPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSM 192
Query: 624 SYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRT-LVVGTYGYIAP 682
++H D KP + D +ADFG ++ + R VGT YI+P
Sbjct: 193 GFIHRDVKPDNMLLDKSGHLK---------LADFGTCMKMNKEGMVRCDTAVGTPDYISP 243
Query: 683 ELAYTMA----VTEKCDVYSFGVVALEVLMGSHP 712
E+ + +CD +S GV E+L+G P
Sbjct: 244 EVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 87/212 (41%), Gaps = 12/212 (5%)
Query: 507 TEDFHIKYCIGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIR 565
ED+ + +G G G V A + + VA+K + + E+ + E + +
Sbjct: 5 VEDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINKMLN 62
Query: 566 HRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSY 625
H N+VK YG +L EY G LF + D+ E D + + + Y
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVY 119
Query: 626 LHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTL--VVGTYGYIAPE 683
LH I HRD ++DFGLA + ++ R L + GT Y+APE
Sbjct: 120 LH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 684 LAYTMAV-TEKCDVYSFGVVALEVLMGSHPTD 714
L E DV+S G+V +L G P D
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 92/201 (45%), Gaps = 9/201 (4%)
Query: 516 IGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
+G G +G V + +G VA+K L+R + + + E + L RH +I+KLY
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 575 FCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSI 634
F++ EY+ G LF + E++ + + + + A+ Y H + +
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARR---LFQQILSAVDYCH---RHMV 132
Query: 635 VHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPE-LAYTMAVTEK 693
VHRD A +ADFGL+ ++ RT G+ Y APE ++ + +
Sbjct: 133 VHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRT-SCGSPNYAAPEVISGRLYAGPE 191
Query: 694 CDVYSFGVVALEVLMGSHPTD 714
D++S GV+ +L G+ P D
Sbjct: 192 VDIWSCGVILYALLCGTLPFD 212
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 97/216 (44%), Gaps = 19/216 (8%)
Query: 508 EDFHIKYCIGTGGYGSVYRAQL----SSGKLVALKKLHRSETEEPA-FLESFQTEARLLS 562
E+F + +GTG YG V+ + +GKL A+K L ++ + A E +TE ++L
Sbjct: 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE 113
Query: 563 QIRHRN-IVKL-YGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNI-VKSM 619
IR +V L Y F K + LI +Y+ G LF L E V I V +
Sbjct: 114 HIRQSPFLVTLHYAFQTETK-LHLILDYINGGELFTHLSQRERFTE----HEVQIYVGEI 168
Query: 620 AHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTL-VVGTYG 678
AL +LH K I++RD + DFGL++ D + R GT
Sbjct: 169 VLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIE 225
Query: 679 YIAPELAY--TMAVTEKCDVYSFGVVALEVLMGSHP 712
Y+AP++ + D +S GV+ E+L G+ P
Sbjct: 226 YMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASP 261
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 97/217 (44%), Gaps = 28/217 (12%)
Query: 516 IGTGGYGSVYRA-QLSSGK-----LVALKKLHRSETEEPAFLESFQTEARLLSQI-RHRN 568
+G G +G V A GK VA+K L + + E+ +E +++S + +H N
Sbjct: 46 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEK--EALMSELKIMSHLGQHEN 103
Query: 569 IVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEA-------VELDWTKRVNIVKSMAH 621
IV L G C H + +I EY G L LR EA L+ ++ +A
Sbjct: 104 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQ 163
Query: 622 ALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSS-----NRTLVVGT 676
+++L + +HRD A + DFGLAR + DS+ N L V
Sbjct: 164 GMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV-- 218
Query: 677 YGYIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHP 712
++APE + T + DV+S+G++ E+ +G +P
Sbjct: 219 -KWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNP 254
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 86/207 (41%), Gaps = 8/207 (3%)
Query: 508 EDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLS-QIR 565
EDF + +G G +G V+ A+ + + A+K L + +E E R+LS
Sbjct: 17 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWE 76
Query: 566 HRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSY 625
H + ++ + +F + EY+ G L +++ + D ++ + L +
Sbjct: 77 HPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQS---CHKFDLSRATFYAAEIILGLQF 133
Query: 626 LHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELA 685
LH IV+RD +ADFG+ + + GT YIAPE+
Sbjct: 134 LH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEIL 190
Query: 686 YTMAVTEKCDVYSFGVVALEVLMGSHP 712
D +SFGV+ E+L+G P
Sbjct: 191 LGQKYNHSVDWWSFGVLLYEMLIGQSP 217
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 92/200 (46%), Gaps = 25/200 (12%)
Query: 519 GGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLH 578
G +G VY+AQ ++A K+ +++EE LE + E +L+ H NIVKL +
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVIDTKSEEE--LEDYMVEIDILASCDHPNIVKLLDAFYY 78
Query: 579 NKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVN------IVKSMAHALSYLHYDCKP 632
++++ E+ G+ V+AV L+ + + + K AL+YLH +
Sbjct: 79 ENNLWILIEFCAGGA--------VDAVMLELERPLTESQIQVVCKQTLDALNYLHDN--- 127
Query: 633 SIVHRDXXXXXXXXXXXXEAFVADFGL-ARLLHPDSSNRTLVVGTYGYIAPELAYTMAVT 691
I+HRD + +ADFG+ A+ R +GT ++APE+
Sbjct: 128 KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSK 187
Query: 692 E-----KCDVYSFGVVALEV 706
+ K DV+S G+ +E+
Sbjct: 188 DRPYDYKADVWSLGITLIEM 207
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 93/208 (44%), Gaps = 10/208 (4%)
Query: 509 DFHIKYCIGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHR 567
++ ++ IG G + V A+ + +G+ VA+K + +++ P L+ E R++ + H
Sbjct: 16 NYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLN-PTSLQKLFREVRIMKILNHP 74
Query: 568 NIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLH 627
NIVKL+ K ++L+ EY G +F L E + + + + A+ Y H
Sbjct: 75 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAK---FRQIVSAVQYCH 131
Query: 628 YDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYT 687
+ IVHRD +ADFG + + T G+ Y APEL
Sbjct: 132 ---QKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTF-CGSPPYAAPELFQG 187
Query: 688 MAVT-EKCDVYSFGVVALEVLMGSHPTD 714
+ DV+S GV+ ++ GS P D
Sbjct: 188 KKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 90/208 (43%), Gaps = 9/208 (4%)
Query: 508 EDFHIKYCIGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRH 566
EDF +G G + +V A +L++ + A+K L + + + E ++S++ H
Sbjct: 10 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 69
Query: 567 RNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYL 626
VKLY ++ ++ Y + G L +R D T + AL YL
Sbjct: 70 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK---IGSFDETCTRFYTAEIVSALEYL 126
Query: 627 HYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDS--SNRTLVVGTYGYIAPEL 684
H I+HRD + DFG A++L P+S + VGT Y++PEL
Sbjct: 127 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 183
Query: 685 AYTMAVTEKCDVYSFGVVALEVLMGSHP 712
+ + D+++ G + +++ G P
Sbjct: 184 LTEKSACKSSDLWALGCIIYQLVAGLPP 211
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 93/206 (45%), Gaps = 16/206 (7%)
Query: 508 EDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRH 566
E+F IG G YG VY+A+ +G++VALKK+ R +TE + E LL ++ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNH 61
Query: 567 RNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYL 626
NIVKL ++L++E++ + L+ ++A L I + L L
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQD-----LKKFMDASALTGIPLPLIKSYLFQLLQGL 116
Query: 627 HYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPEL-- 684
+ ++HRD +ADFGLAR T V T Y APE+
Sbjct: 117 SFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 176
Query: 685 ---AYTMAVTEKCDVYSFGVVALEVL 707
Y+ AV D++S G + E++
Sbjct: 177 GCKYYSTAV----DIWSLGCIFAEMV 198
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 97/214 (45%), Gaps = 17/214 (7%)
Query: 507 TEDFHIKYCIGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIR 565
ED+ + IG G +G V + S+ K+ A+K L + E + + F E +++
Sbjct: 73 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN 132
Query: 566 HRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRN-DV-EAVELDWTKRVNIVKSMAHAL 623
+V+L+ ++ ++++ EYM G L ++ N DV E +T V + H++
Sbjct: 133 SPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSM 192
Query: 624 SYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRT-LVVGTYGYIAP 682
++H D KP + D +ADFG ++ + R VGT YI+P
Sbjct: 193 GFIHRDVKPDNMLLDKSGHLK---------LADFGTCMKMNKEGMVRCDTAVGTPDYISP 243
Query: 683 ELAYTMA----VTEKCDVYSFGVVALEVLMGSHP 712
E+ + +CD +S GV E+L+G P
Sbjct: 244 EVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 91/208 (43%), Gaps = 9/208 (4%)
Query: 508 EDFHIKYCIGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRH 566
EDF +G G + +V A +L++ + A+K L + + + E ++S++ H
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 94
Query: 567 RNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYL 626
VKLY ++ ++ Y + G L +R + D T + AL YL
Sbjct: 95 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR---KIGSFDETCTRFYTAEIVSALEYL 151
Query: 627 HYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDS--SNRTLVVGTYGYIAPEL 684
H I+HRD + DFG A++L P+S + VGT Y++PEL
Sbjct: 152 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 208
Query: 685 AYTMAVTEKCDVYSFGVVALEVLMGSHP 712
+ + D+++ G + +++ G P
Sbjct: 209 LTEKSACKSSDLWALGCIIYQLVAGLPP 236
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 102/224 (45%), Gaps = 25/224 (11%)
Query: 503 MIEATEDFHIKYCIGTGGYGSVYRA-QLSSGKLV----ALKKLHRSETEEPAFLESFQTE 557
+++ TE +K +G+G +G+VY+ + G+ V A+K L +ET P F E
Sbjct: 34 ILKETELKRVK-VLGSGAFGTVYKGIWVPEGETVKIPVAIKIL--NETTGPKANVEFMDE 90
Query: 558 ARLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVE----LDWTKRV 613
A +++ + H ++V+L G CL + + L+ + M G L + + + L+W V
Sbjct: 91 ALIMASMDHPHLVRLLGVCL-SPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWC--V 147
Query: 614 NIVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLV 673
I K M YL + +VHRD + DFGLARLL D
Sbjct: 148 QIAKGMM----YLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNAD 200
Query: 674 VGTY--GYIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHPTD 714
G ++A E + T + DV+S+GV E++ G P D
Sbjct: 201 GGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYD 244
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 90/208 (43%), Gaps = 9/208 (4%)
Query: 508 EDFHIKYCIGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRH 566
EDF +G G + +V A +L++ + A+K L + + + E ++S++ H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 567 RNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYL 626
VKLY ++ ++ Y + G L +R D T + AL YL
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK---IGSFDETCTRFYTAEIVSALEYL 148
Query: 627 HYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDS--SNRTLVVGTYGYIAPEL 684
H I+HRD + DFG A++L P+S + VGT Y++PEL
Sbjct: 149 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 205
Query: 685 AYTMAVTEKCDVYSFGVVALEVLMGSHP 712
+ + D+++ G + +++ G P
Sbjct: 206 LTEKSAXKSSDLWALGCIIYQLVAGLPP 233
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 92/222 (41%), Gaps = 30/222 (13%)
Query: 516 IGTGGYGSVYRAQ---LSSGK-----LVALKKLHRSETEEPAFLESFQTEARLLSQI-RH 566
+G G +G V A+ L K VA+K L TE+ L +E ++ I +H
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKD--LSDLISEMEMMKMIGKH 93
Query: 567 RNIVKLYGFCLHNKCMFLIYEYMERGSL-------------FCVLRNDVEAVELDWTKRV 613
+NI+ L G C + +++I EY +G+L F + +L V
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLV 153
Query: 614 NIVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLV 673
+ +A + YL +HRD +ADFGLAR +H +
Sbjct: 154 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTT 210
Query: 674 VGT--YGYIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHP 712
G ++APE + T + DV+SFGV+ E+ +G P
Sbjct: 211 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 252
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 94/215 (43%), Gaps = 27/215 (12%)
Query: 510 FHIKYCIGTGGYGSVYRAQL-SSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRN 568
F I IG G +G V Q + K+ A+K +++ + E + + E +++ + H
Sbjct: 17 FEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPF 76
Query: 569 IVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDV----EAVELDWTKRVNIVKSMAHALS 624
+V L+ + MF++ + + G L L+ +V E V+L + + AL
Sbjct: 77 LVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKL-------FICELVMALD 129
Query: 625 YLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPEL 684
YL I+HRD + DF +A +L P + T + GT Y+APE+
Sbjct: 130 YLQ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAAML-PRETQITTMAGTKPYMAPEM 185
Query: 685 -------AYTMAVTEKCDVYSFGVVALEVLMGSHP 712
Y+ AV D +S GV A E+L G P
Sbjct: 186 FSSRKGAGYSFAV----DWWSLGVTAYELLRGRRP 216
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 97/217 (44%), Gaps = 28/217 (12%)
Query: 516 IGTGGYGSVYRA-QLSSGK-----LVALKKLHRSETEEPAFLESFQTEARLLSQI-RHRN 568
+G G +G V A GK VA+K L + + E+ +E +++S + +H N
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEK--EALMSELKIMSHLGQHEN 111
Query: 569 IVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEA-------VELDWTKRVNIVKSMAH 621
IV L G C H + +I EY G L LR EA L+ ++ +A
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQ 171
Query: 622 ALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSS-----NRTLVVGT 676
+++L + +HRD A + DFGLAR + DS+ N L V
Sbjct: 172 GMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV-- 226
Query: 677 YGYIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHP 712
++APE + T + DV+S+G++ E+ +G +P
Sbjct: 227 -KWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNP 262
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 90/208 (43%), Gaps = 9/208 (4%)
Query: 508 EDFHIKYCIGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRH 566
EDF +G G + +V A +L++ + A+K L + + + E ++S++ H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 567 RNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYL 626
VKLY ++ ++ Y + G L +R D T + AL YL
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK---IGSFDETCTRFYTAEIVSALEYL 148
Query: 627 HYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDS--SNRTLVVGTYGYIAPEL 684
H I+HRD + DFG A++L P+S + VGT Y++PEL
Sbjct: 149 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 205
Query: 685 AYTMAVTEKCDVYSFGVVALEVLMGSHP 712
+ + D+++ G + +++ G P
Sbjct: 206 LTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 94/208 (45%), Gaps = 16/208 (7%)
Query: 506 ATEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQI 564
+ E+F IG G YG VY+A+ +G++VALKK+ R +TE + E LL ++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKEL 60
Query: 565 RHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALS 624
H NIVKL ++L++E++ + L+ ++A L I + L
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLHQD-----LKKFMDASALTGIPLPLIKSYLFQLLQ 115
Query: 625 YLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPEL 684
L + ++HRD +ADFGLAR T V T Y APE+
Sbjct: 116 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI 175
Query: 685 -----AYTMAVTEKCDVYSFGVVALEVL 707
Y+ AV D++S G + E++
Sbjct: 176 LLGCKYYSTAV----DIWSLGCIFAEMV 199
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 91/211 (43%), Gaps = 16/211 (7%)
Query: 511 HIKYCIGTGGYGSVYRAQL--SSGKLV--ALKKLHRSETEEPAFLESFQTEARLLSQIRH 566
H IG G +G VY L + GK + A+K L+R + + F TE ++ H
Sbjct: 34 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSH 91
Query: 567 RNIVKLYGFCLHNK-CMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSY 625
N++ L G CL ++ ++ YM+ G L +RN+ + + +A + +
Sbjct: 92 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKF 149
Query: 626 LHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLL---HPDS-SNRTLVVGTYGYIA 681
L VHRD VADFGLAR + DS N+T ++A
Sbjct: 150 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMA 206
Query: 682 PELAYTMAVTEKCDVYSFGVVALEVLMGSHP 712
E T T K DV+SFGV+ E++ P
Sbjct: 207 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 93/206 (45%), Gaps = 16/206 (7%)
Query: 508 EDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRH 566
E+F IG G YG VY+A+ +G++VALKK+ R +TE + E LL ++ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNH 60
Query: 567 RNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYL 626
NIVKL ++L++E++ + L+ ++A L I + L L
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQD-----LKKFMDASALTGIPLPLIKSYLFQLLQGL 115
Query: 627 HYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPEL-- 684
+ ++HRD +ADFGLAR T V T Y APE+
Sbjct: 116 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 175
Query: 685 ---AYTMAVTEKCDVYSFGVVALEVL 707
Y+ AV D++S G + E++
Sbjct: 176 GCKYYSTAV----DIWSLGCIFAEMV 197
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 90/208 (43%), Gaps = 9/208 (4%)
Query: 508 EDFHIKYCIGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRH 566
EDF +G G + +V A +L++ + A+K L + + + E ++S++ H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 567 RNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYL 626
VKLY ++ ++ Y + G L +R D T + AL YL
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK---IGSFDETCTRFYTAEIVSALEYL 149
Query: 627 HYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDS--SNRTLVVGTYGYIAPEL 684
H I+HRD + DFG A++L P+S + VGT Y++PEL
Sbjct: 150 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 206
Query: 685 AYTMAVTEKCDVYSFGVVALEVLMGSHP 712
+ + D+++ G + +++ G P
Sbjct: 207 LTEKSACKSSDLWALGCIIYQLVAGLPP 234
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 93/206 (45%), Gaps = 16/206 (7%)
Query: 508 EDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRH 566
E+F IG G YG VY+A+ +G++VALKK+ R +TE + E LL ++ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNH 61
Query: 567 RNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYL 626
NIVKL ++L++E++ + L+ ++A L I + L L
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQD-----LKKFMDASALTGIPLPLIKSYLFQLLQGL 116
Query: 627 HYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPEL-- 684
+ ++HRD +ADFGLAR T V T Y APE+
Sbjct: 117 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 176
Query: 685 ---AYTMAVTEKCDVYSFGVVALEVL 707
Y+ AV D++S G + E++
Sbjct: 177 GXKYYSTAV----DIWSLGCIFAEMV 198
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 93/206 (45%), Gaps = 16/206 (7%)
Query: 508 EDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRH 566
E+F IG G YG VY+A+ +G++VALKK+ R +TE + E LL ++ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNH 61
Query: 567 RNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYL 626
NIVKL ++L++E++ + L+ ++A L I + L L
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQD-----LKKFMDASALTGIPLPLIKSYLFQLLQGL 116
Query: 627 HYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPEL-- 684
+ ++HRD +ADFGLAR T V T Y APE+
Sbjct: 117 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 176
Query: 685 ---AYTMAVTEKCDVYSFGVVALEVL 707
Y+ AV D++S G + E++
Sbjct: 177 GCKYYSTAV----DIWSLGCIFAEMV 198
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 93/206 (45%), Gaps = 16/206 (7%)
Query: 508 EDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRH 566
E+F IG G YG VY+A+ +G++VALKK+ R +TE + E LL ++ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNH 61
Query: 567 RNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYL 626
NIVKL ++L++E++ + L+ ++A L I + L L
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQD-----LKKFMDASALTGIPLPLIKSYLFQLLQGL 116
Query: 627 HYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPEL-- 684
+ ++HRD +ADFGLAR T V T Y APE+
Sbjct: 117 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 176
Query: 685 ---AYTMAVTEKCDVYSFGVVALEVL 707
Y+ AV D++S G + E++
Sbjct: 177 GCKYYSTAV----DIWSLGCIFAEMV 198
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 90/208 (43%), Gaps = 9/208 (4%)
Query: 508 EDFHIKYCIGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRH 566
EDF +G G + +V A +L++ + A+K L + + + E ++S++ H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 567 RNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYL 626
VKLY ++ ++ Y + G L +R D T + AL YL
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK---IGSFDETCTRFYTAEIVSALEYL 148
Query: 627 HYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDS--SNRTLVVGTYGYIAPEL 684
H I+HRD + DFG A++L P+S + VGT Y++PEL
Sbjct: 149 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 205
Query: 685 AYTMAVTEKCDVYSFGVVALEVLMGSHP 712
+ + D+++ G + +++ G P
Sbjct: 206 LTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 93/206 (45%), Gaps = 16/206 (7%)
Query: 508 EDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRH 566
E+F IG G YG VY+A+ +G++VALKK+ R +TE + E LL ++ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNH 60
Query: 567 RNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYL 626
NIVKL ++L++E++ + L+ ++A L I + L L
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQD-----LKKFMDASALTGIPLPLIKSYLFQLLQGL 115
Query: 627 HYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPEL-- 684
+ ++HRD +ADFGLAR T V T Y APE+
Sbjct: 116 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 175
Query: 685 ---AYTMAVTEKCDVYSFGVVALEVL 707
Y+ AV D++S G + E++
Sbjct: 176 GCKYYSTAV----DIWSLGCIFAEMV 197
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 90/208 (43%), Gaps = 9/208 (4%)
Query: 508 EDFHIKYCIGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRH 566
EDF +G G + +V A +L++ + A+K L + + + E ++S++ H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 567 RNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYL 626
VKLY ++ ++ Y + G L +R D T + AL YL
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK---IGSFDETCTRFYTAEIVSALEYL 148
Query: 627 HYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDS--SNRTLVVGTYGYIAPEL 684
H I+HRD + DFG A++L P+S + VGT Y++PEL
Sbjct: 149 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 205
Query: 685 AYTMAVTEKCDVYSFGVVALEVLMGSHP 712
+ + D+++ G + +++ G P
Sbjct: 206 LTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 90/208 (43%), Gaps = 9/208 (4%)
Query: 508 EDFHIKYCIGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRH 566
EDF +G G + +V A +L++ + A+K L + + + E ++S++ H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 567 RNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYL 626
VKLY ++ ++ Y + G L +R D T + AL YL
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK---IGSFDETCTRFYTAEIVSALEYL 146
Query: 627 HYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDS--SNRTLVVGTYGYIAPEL 684
H I+HRD + DFG A++L P+S + VGT Y++PEL
Sbjct: 147 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 203
Query: 685 AYTMAVTEKCDVYSFGVVALEVLMGSHP 712
+ + D+++ G + +++ G P
Sbjct: 204 LTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 90/208 (43%), Gaps = 9/208 (4%)
Query: 508 EDFHIKYCIGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRH 566
EDF +G G + +V A +L++ + A+K L + + + E ++S++ H
Sbjct: 9 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 68
Query: 567 RNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYL 626
VKLY ++ ++ Y + G L +R D T + AL YL
Sbjct: 69 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK---IGSFDETCTRFYTAEIVSALEYL 125
Query: 627 HYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDS--SNRTLVVGTYGYIAPEL 684
H I+HRD + DFG A++L P+S + VGT Y++PEL
Sbjct: 126 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 182
Query: 685 AYTMAVTEKCDVYSFGVVALEVLMGSHP 712
+ + D+++ G + +++ G P
Sbjct: 183 LTEKSACKSSDLWALGCIIYQLVAGLPP 210
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 95/211 (45%), Gaps = 24/211 (11%)
Query: 516 IGTGGYGSVYRA-QLSSGKLV----ALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIV 570
+G+G +G+VY+ + G+ V A+K L +ET P F EA +++ + H ++V
Sbjct: 23 LGSGAFGTVYKGIWVPEGETVKIPVAIKIL--NETTGPKANVEFMDEALIMASMDHPHLV 80
Query: 571 KLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVE----LDWTKRVNIVKSMAHALSYL 626
+L G CL + + L+ + M G L + + + L+W V I K M YL
Sbjct: 81 RLLGVCL-SPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWC--VQIAKGMM----YL 133
Query: 627 HYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTY--GYIAPEL 684
+ +VHRD + DFGLARLL D G ++A E
Sbjct: 134 E---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALEC 190
Query: 685 AYTMAVTEKCDVYSFGVVALEVL-MGSHPTD 714
+ T + DV+S+GV E++ G P D
Sbjct: 191 IHYRKFTHQSDVWSYGVTIWELMTFGGKPYD 221
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 93/206 (45%), Gaps = 16/206 (7%)
Query: 508 EDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRH 566
E+F IG G YG VY+A+ +G++VALKK+ R +TE + E LL ++ H
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNH 65
Query: 567 RNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYL 626
NIVKL ++L++E++ + L+ ++A L I + L L
Sbjct: 66 PNIVKLLDVIHTENKLYLVFEFLHQD-----LKKFMDASALTGIPLPLIKSYLFQLLQGL 120
Query: 627 HYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPEL-- 684
+ ++HRD +ADFGLAR T V T Y APE+
Sbjct: 121 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 180
Query: 685 ---AYTMAVTEKCDVYSFGVVALEVL 707
Y+ AV D++S G + E++
Sbjct: 181 GCKYYSTAV----DIWSLGCIFAEMV 202
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 90/208 (43%), Gaps = 9/208 (4%)
Query: 508 EDFHIKYCIGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRH 566
EDF +G G + +V A +L++ + A+K L + + + E ++S++ H
Sbjct: 7 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 66
Query: 567 RNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYL 626
VKLY ++ ++ Y + G L +R D T + AL YL
Sbjct: 67 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK---IGSFDETCTRFYTAEIVSALEYL 123
Query: 627 HYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDS--SNRTLVVGTYGYIAPEL 684
H I+HRD + DFG A++L P+S + VGT Y++PEL
Sbjct: 124 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 180
Query: 685 AYTMAVTEKCDVYSFGVVALEVLMGSHP 712
+ + D+++ G + +++ G P
Sbjct: 181 LTEKSACKSSDLWALGCIIYQLVAGLPP 208
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 90/208 (43%), Gaps = 9/208 (4%)
Query: 508 EDFHIKYCIGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRH 566
EDF +G G + +V A +L++ + A+K L + + + E ++S++ H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 567 RNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYL 626
VKLY ++ ++ Y + G L +R D T + AL YL
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK---IGSFDETCTRFYTAEIVSALEYL 148
Query: 627 HYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDS--SNRTLVVGTYGYIAPEL 684
H I+HRD + DFG A++L P+S + VGT Y++PEL
Sbjct: 149 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 205
Query: 685 AYTMAVTEKCDVYSFGVVALEVLMGSHP 712
+ + D+++ G + +++ G P
Sbjct: 206 LTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 90/208 (43%), Gaps = 9/208 (4%)
Query: 508 EDFHIKYCIGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRH 566
EDF +G G + +V A +L++ + A+K L + + + E ++S++ H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 567 RNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYL 626
VKLY ++ ++ Y + G L +R D T + AL YL
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK---IGSFDETCTRFYTAEIVSALEYL 146
Query: 627 HYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDS--SNRTLVVGTYGYIAPEL 684
H I+HRD + DFG A++L P+S + VGT Y++PEL
Sbjct: 147 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 203
Query: 685 AYTMAVTEKCDVYSFGVVALEVLMGSHP 712
+ + D+++ G + +++ G P
Sbjct: 204 LTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 90/208 (43%), Gaps = 9/208 (4%)
Query: 508 EDFHIKYCIGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRH 566
EDF +G G + +V A +L++ + A+K L + + + E ++S++ H
Sbjct: 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 67
Query: 567 RNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYL 626
VKLY ++ ++ Y + G L +R D T + AL YL
Sbjct: 68 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK---IGSFDETCTRFYTAEIVSALEYL 124
Query: 627 HYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDS--SNRTLVVGTYGYIAPEL 684
H I+HRD + DFG A++L P+S + VGT Y++PEL
Sbjct: 125 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 181
Query: 685 AYTMAVTEKCDVYSFGVVALEVLMGSHP 712
+ + D+++ G + +++ G P
Sbjct: 182 LTEKSACKSSDLWALGCIIYQLVAGLPP 209
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 97/224 (43%), Gaps = 16/224 (7%)
Query: 493 NYDGRITFEEMIEATEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFL 551
+DGR+ I +G G +G V + +G VA+K L+R + +
Sbjct: 8 KHDGRVKIGHYILGD-------TLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVV 60
Query: 552 ESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTK 611
+ E + L RH +I+KLY +F++ EY+ G LF + + LD +
Sbjct: 61 GKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYI---CKNGRLDEKE 117
Query: 612 RVNIVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRT 671
+ + + + Y H + +VHRD A +ADFGL+ ++ D
Sbjct: 118 SRRLFQQILSGVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMM-SDGEFLR 173
Query: 672 LVVGTYGYIAPE-LAYTMAVTEKCDVYSFGVVALEVLMGSHPTD 714
G+ Y APE ++ + + D++S GV+ +L G+ P D
Sbjct: 174 XSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFD 217
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 87/200 (43%), Gaps = 11/200 (5%)
Query: 516 IGTGGYGSVYR-AQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
+G GG+ Y + + ++ A K + +S +P E TE + + + ++V +G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 575 FCLHNKCMFLIYEYMERGSLFCV--LRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKP 632
F + ++++ E R SL + R V E + R I + YLH +
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI-----QGVQYLHNN--- 161
Query: 633 SIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYTMAVTE 692
++HRD + + DFGLA + D + + GT YIAPE+ +
Sbjct: 162 RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLCKKGHSF 221
Query: 693 KCDVYSFGVVALEVLMGSHP 712
+ D++S G + +L+G P
Sbjct: 222 EVDIWSLGCILYTLLVGKPP 241
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 90/208 (43%), Gaps = 9/208 (4%)
Query: 508 EDFHIKYCIGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRH 566
EDF +G G + +V A +L++ + A+K L + + + E ++S++ H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 567 RNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYL 626
VKLY ++ ++ Y + G L +R D T + AL YL
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK---IGSFDETCTRFYTAEIVSALEYL 146
Query: 627 HYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDS--SNRTLVVGTYGYIAPEL 684
H I+HRD + DFG A++L P+S + VGT Y++PEL
Sbjct: 147 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPEL 203
Query: 685 AYTMAVTEKCDVYSFGVVALEVLMGSHP 712
+ + D+++ G + +++ G P
Sbjct: 204 LTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 87/200 (43%), Gaps = 11/200 (5%)
Query: 516 IGTGGYGSVYR-AQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
+G GG+ Y + + ++ A K + +S +P E TE + + + ++V +G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 575 FCLHNKCMFLIYEYMERGSLFCV--LRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKP 632
F + ++++ E R SL + R V E + R I + YLH +
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI-----QGVQYLHNN--- 161
Query: 633 SIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYTMAVTE 692
++HRD + + DFGLA + D + + GT YIAPE+ +
Sbjct: 162 RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVLCKKGHSF 221
Query: 693 KCDVYSFGVVALEVLMGSHP 712
+ D++S G + +L+G P
Sbjct: 222 EVDIWSLGCILYTLLVGKPP 241
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 89/208 (42%), Gaps = 9/208 (4%)
Query: 508 EDFHIKYCIGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRH 566
EDF +G G + +V A +L++ + A+K L + + + E ++S++ H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 567 RNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYL 626
VKLY ++ ++ Y + G L +R D T + AL YL
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK---IGSFDETCTRFYTAEIVSALEYL 149
Query: 627 HYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTL--VVGTYGYIAPEL 684
H I+HRD + DFG A++L P+S VGT Y++PEL
Sbjct: 150 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPEL 206
Query: 685 AYTMAVTEKCDVYSFGVVALEVLMGSHP 712
+ + D+++ G + +++ G P
Sbjct: 207 LTEKSACKSSDLWALGCIIYQLVAGLPP 234
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 99/217 (45%), Gaps = 42/217 (19%)
Query: 516 IGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLES--FQTEARLLSQIRHRNIVKLY 573
IG G +G V+R + G+ VA+K + S E F E+ +QT +RH NI+
Sbjct: 50 IGKGRFGEVWRGKWR-GEEVAVK-IFSSREERSWFREAEIYQT-----VMLRHENIL--- 99
Query: 574 GF-CLHNK------CMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYL 626
GF NK ++L+ +Y E GSLF L VE + + S A L++L
Sbjct: 100 GFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE----GMIKLALSTASGLAHL 155
Query: 627 HYDC-----KPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTL------VVG 675
H + KP+I HRD +AD GLA + DS+ T+ VG
Sbjct: 156 HMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVG 213
Query: 676 TYGYIAPEL---AYTMAVTE---KCDVYSFGVVALEV 706
T Y+APE+ + M E + D+Y+ G+V E+
Sbjct: 214 TKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 94/220 (42%), Gaps = 30/220 (13%)
Query: 516 IGTGGYGSVYRA-QLSSGK-----LVALKKLHRSETEEPAFLESFQTEARLLSQI-RHRN 568
+G G +G V A GK VA+K L + + E+ +E +++S + +H N
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEK--EALMSELKIMSHLGQHEN 111
Query: 569 IVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHY 628
IV L G C H + +I EY G L LR +E D I S LH+
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETD--PAFAIANSTLSTRDLLHF 169
Query: 629 DCK----------PSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSS-----NRTLV 673
+ + +HRD A + DFGLAR + DS+ N L
Sbjct: 170 SSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLP 229
Query: 674 VGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHP 712
V ++APE + T + DV+S+G++ E+ +G +P
Sbjct: 230 V---KWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNP 266
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 97/227 (42%), Gaps = 40/227 (17%)
Query: 516 IGTGGYGSVYRAQ---LSSGK-----LVALKKLHRSETEEPAFLESFQTEARLLSQI-RH 566
+G G +G V A+ L K VA+K L TE+ L +E ++ I +H
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKD--LSDLISEMEMMKMIGKH 134
Query: 567 RNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLR---------------NDVEAVELDWTK 611
+NI+ L G C + +++I EY +G+L L+ N E +L
Sbjct: 135 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEE--QLSSKD 192
Query: 612 RVNIVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLH-----PD 666
V+ +A + YL +HRD +ADFGLAR +H
Sbjct: 193 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 249
Query: 667 SSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHP 712
++N L V ++APE + T + DV+SFGV+ E+ +G P
Sbjct: 250 TTNGRLPV---KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 293
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 99/217 (45%), Gaps = 42/217 (19%)
Query: 516 IGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLES--FQTEARLLSQIRHRNIVKLY 573
IG G +G V+R + G+ VA+K + S E F E+ +QT +RH NI+
Sbjct: 37 IGKGRFGEVWRGKWR-GEEVAVK-IFSSREERSWFREAEIYQT-----VMLRHENIL--- 86
Query: 574 GF-CLHNK------CMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYL 626
GF NK ++L+ +Y E GSLF L VE + + S A L++L
Sbjct: 87 GFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE----GMIKLALSTASGLAHL 142
Query: 627 HYDC-----KPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTL------VVG 675
H + KP+I HRD +AD GLA + DS+ T+ VG
Sbjct: 143 HMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVG 200
Query: 676 TYGYIAPEL---AYTMAVTE---KCDVYSFGVVALEV 706
T Y+APE+ + M E + D+Y+ G+V E+
Sbjct: 201 TKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 90/208 (43%), Gaps = 9/208 (4%)
Query: 508 EDFHIKYCIGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRH 566
EDF +G G + +V A +L++ + A+K L + + + E ++S++ H
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 73
Query: 567 RNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYL 626
VKLY ++ ++ Y + G L +R D T + AL YL
Sbjct: 74 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK---IGSFDETCTRFYTAEIVSALEYL 130
Query: 627 HYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDS--SNRTLVVGTYGYIAPEL 684
H I+HRD + DFG A++L P+S + VGT Y++PEL
Sbjct: 131 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 187
Query: 685 AYTMAVTEKCDVYSFGVVALEVLMGSHP 712
+ + D+++ G + +++ G P
Sbjct: 188 LTEKSACKSSDLWALGCIIYQLVAGLPP 215
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 87/200 (43%), Gaps = 11/200 (5%)
Query: 516 IGTGGYGSVYR-AQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
+G GG+ Y + + ++ A K + +S +P E TE + + + ++V +G
Sbjct: 34 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 93
Query: 575 FCLHNKCMFLIYEYMERGSLFCV--LRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKP 632
F + ++++ E R SL + R V E + R I + YLH +
Sbjct: 94 FFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI-----QGVQYLHNN--- 145
Query: 633 SIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYTMAVTE 692
++HRD + + DFGLA + D + + GT YIAPE+ +
Sbjct: 146 RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSF 205
Query: 693 KCDVYSFGVVALEVLMGSHP 712
+ D++S G + +L+G P
Sbjct: 206 EVDIWSLGCILYTLLVGKPP 225
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 90/208 (43%), Gaps = 9/208 (4%)
Query: 508 EDFHIKYCIGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRH 566
EDF +G G + +V A +L++ + A+K L + + + E ++S++ H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 567 RNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYL 626
VKLY ++ ++ Y + G L +R D T + AL YL
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK---IGSFDETCTRFYTAEIVSALEYL 145
Query: 627 HYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDS--SNRTLVVGTYGYIAPEL 684
H I+HRD + DFG A++L P+S + VGT Y++PEL
Sbjct: 146 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 202
Query: 685 AYTMAVTEKCDVYSFGVVALEVLMGSHP 712
+ + D+++ G + +++ G P
Sbjct: 203 LTEKSACKSSDLWALGCIIYQLVAGLPP 230
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 98/219 (44%), Gaps = 27/219 (12%)
Query: 507 TEDFHIKYCIGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIR 565
ED+ + IG G +G V + +S K+ A+K L + E + + F E +++
Sbjct: 74 AEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN 133
Query: 566 HRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRN-DV-EAVELDWTKRVNIVKSMAHAL 623
+V+L+ +K ++++ EYM G L ++ N DV E +T V + H++
Sbjct: 134 SPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSM 193
Query: 624 SYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLAR------LLHPDSSNRTLVVGTY 677
+H D KP + D +ADFG ++H D++ VGT
Sbjct: 194 GLIHRDVKPDNMLLDKHGHLK---------LADFGTCMKMDETGMVHCDTA-----VGTP 239
Query: 678 GYIAPELAYTMA----VTEKCDVYSFGVVALEVLMGSHP 712
YI+PE+ + +CD +S GV E+L+G P
Sbjct: 240 DYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTP 278
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 91/201 (45%), Gaps = 9/201 (4%)
Query: 516 IGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
+G G +G V + +G VA+K L+R + + + E + L RH +I+KLY
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 575 FCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSI 634
F++ EY+ G LF + E++ + + + + A+ Y H + +
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARR---LFQQILSAVDYCH---RHMV 132
Query: 635 VHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPE-LAYTMAVTEK 693
VHRD A +ADFGL+ ++ D G+ Y APE ++ + +
Sbjct: 133 VHRDLKPENVLLDAHMNAKIADFGLSNMM-SDGEFLRDSCGSPNYAAPEVISGRLYAGPE 191
Query: 694 CDVYSFGVVALEVLMGSHPTD 714
D++S GV+ +L G+ P D
Sbjct: 192 VDIWSCGVILYALLCGTLPFD 212
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 87/200 (43%), Gaps = 11/200 (5%)
Query: 516 IGTGGYGSVYR-AQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
+G GG+ Y + + ++ A K + +S +P E TE + + + ++V +G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 575 FCLHNKCMFLIYEYMERGSLFCV--LRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKP 632
F + ++++ E R SL + R V E + R I + YLH +
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI-----QGVQYLHNN--- 161
Query: 633 SIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYTMAVTE 692
++HRD + + DFGLA + D + + GT YIAPE+ +
Sbjct: 162 RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSF 221
Query: 693 KCDVYSFGVVALEVLMGSHP 712
+ D++S G + +L+G P
Sbjct: 222 EVDIWSLGCILYTLLVGKPP 241
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 84/196 (42%), Gaps = 9/196 (4%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
+G+G YGSV A SG+ VA+KKL R E F + E LL ++H N++ L
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSE-IFAKRAYRELLLLKHMQHENVIGLLD 90
Query: 575 FCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSI 634
+ Y++ + ++ K +V M L Y+H +
Sbjct: 91 VFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIH---SAGV 147
Query: 635 VHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYT-MAVTEK 693
VHRD E + DFGLAR H D+ VV T Y APE+ + M +
Sbjct: 148 VHRDLKPGNLAVNEDCELKILDFGLAR--HADAEMTGYVV-TRWYRAPEVILSWMHYNQT 204
Query: 694 CDVYSFGVVALEVLMG 709
D++S G + E+L G
Sbjct: 205 VDIWSVGCIMAEMLTG 220
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 93/206 (45%), Gaps = 16/206 (7%)
Query: 508 EDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRH 566
E+F IG G YG VY+A+ +G++VALKK+ R +TE + E LL ++ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNH 60
Query: 567 RNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYL 626
NIVKL ++L++E++ + L+ ++A L I + L L
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEHVHQD-----LKTFMDASALTGIPLPLIKSYLFQLLQGL 115
Query: 627 HYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPEL-- 684
+ ++HRD +ADFGLAR T V T Y APE+
Sbjct: 116 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 175
Query: 685 ---AYTMAVTEKCDVYSFGVVALEVL 707
Y+ AV D++S G + E++
Sbjct: 176 GCKYYSTAV----DIWSLGCIFAEMV 197
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 90/209 (43%), Gaps = 24/209 (11%)
Query: 516 IGTGGYGSVYRAQLS------SGKLVALKKLHR--SETEEPAFLESFQTEARLLSQIRHR 567
+G G +G VY Q+S S VA+K L SE +E FL EA ++S++ H+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFL----MEALIISKLNHQ 94
Query: 568 NIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRND----VEAVELDWTKRVNIVKSMAHAL 623
NIV+ G L + F++ E M G L LR + L +++ + +A
Sbjct: 95 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 154
Query: 624 SYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVA---DFGLARLLHPDSSNRT--LVVGTYG 678
YL + +HRD VA DFG+AR ++ S R +
Sbjct: 155 QYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 211
Query: 679 YIAPELAYTMAVTEKCDVYSFGVVALEVL 707
++ PE T K D +SFGV+ E+
Sbjct: 212 WMPPEAFMEGIFTSKTDTWSFGVLLWEIF 240
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 90/209 (43%), Gaps = 24/209 (11%)
Query: 516 IGTGGYGSVYRAQLS------SGKLVALKKLHR--SETEEPAFLESFQTEARLLSQIRHR 567
+G G +G VY Q+S S VA+K L SE +E FL EA ++S++ H+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFL----MEALIISKLNHQ 108
Query: 568 NIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRND----VEAVELDWTKRVNIVKSMAHAL 623
NIV+ G L + F++ E M G L LR + L +++ + +A
Sbjct: 109 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 168
Query: 624 SYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVA---DFGLARLLHPDSSNRT--LVVGTYG 678
YL + +HRD VA DFG+AR ++ S R +
Sbjct: 169 QYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 225
Query: 679 YIAPELAYTMAVTEKCDVYSFGVVALEVL 707
++ PE T K D +SFGV+ E+
Sbjct: 226 WMPPEAFMEGIFTSKTDTWSFGVLLWEIF 254
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 89/208 (42%), Gaps = 9/208 (4%)
Query: 508 EDFHIKYCIGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRH 566
EDF +G G + +V A +L++ + A+K L + + + E ++S++ H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 567 RNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYL 626
VKLY ++ ++ Y + G L +R D T + AL YL
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK---IGSFDETCTRFYTAEIVSALEYL 145
Query: 627 HYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTL--VVGTYGYIAPEL 684
H I+HRD + DFG A++L P+S VGT Y++PEL
Sbjct: 146 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPEL 202
Query: 685 AYTMAVTEKCDVYSFGVVALEVLMGSHP 712
+ + D+++ G + +++ G P
Sbjct: 203 LTEKSACKSSDLWALGCIIYQLVAGLPP 230
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 97/229 (42%), Gaps = 44/229 (19%)
Query: 516 IGTGGYGSVYRAQ---LSSGK-----LVALKKLHRSETEEPAFLESFQTEARLLSQI-RH 566
+G G +G V A+ L K VA+K L TE+ L +E ++ I +H
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKD--LSDLISEMEMMKMIGKH 93
Query: 567 RNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVE-----------------LDW 609
+NI+ L G C + +++I EY +G+ LR ++A E L
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGN----LREYLQAREPPGLEYSYNPSHNPEEQLSS 149
Query: 610 TKRVNIVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLH----- 664
V+ +A + YL +HRD +ADFGLAR +H
Sbjct: 150 KDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 206
Query: 665 PDSSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHP 712
++N L V ++APE + T + DV+SFGV+ E+ +G P
Sbjct: 207 KKTTNGRLPV---KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 252
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 99/217 (45%), Gaps = 42/217 (19%)
Query: 516 IGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLES--FQTEARLLSQIRHRNIVKLY 573
IG G +G V+R + G+ VA+K + S E F E+ +QT +RH NI+
Sbjct: 17 IGKGRFGEVWRGKWR-GEEVAVK-IFSSREERSWFREAEIYQT-----VMLRHENIL--- 66
Query: 574 GF-CLHNK------CMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYL 626
GF NK ++L+ +Y E GSLF L VE + + S A L++L
Sbjct: 67 GFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE----GMIKLALSTASGLAHL 122
Query: 627 HYDC-----KPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTL------VVG 675
H + KP+I HRD +AD GLA + DS+ T+ VG
Sbjct: 123 HMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVG 180
Query: 676 TYGYIAPEL---AYTMAVTE---KCDVYSFGVVALEV 706
T Y+APE+ + M E + D+Y+ G+V E+
Sbjct: 181 TKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 87/201 (43%), Gaps = 10/201 (4%)
Query: 516 IGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
IG G + V A+ + +G+ VA+K + +++ P L+ E R++ + H NIVKL+
Sbjct: 23 IGKGNFAKVKLARHILTGREVAIKIIDKTQLN-PTSLQKLFREVRIMKILNHPNIVKLFE 81
Query: 575 FCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSI 634
K ++LI EY G +F L V + + + + + A+ Y H + I
Sbjct: 82 VIETEKTLYLIMEYASGGEVFDYL---VAHGRMKEKEARSKFRQIVSAVQYCH---QKRI 135
Query: 635 VHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYTMAVT-EK 693
VHRD +ADFG + G Y APEL +
Sbjct: 136 VHRDLKAENLLLDADMNIKIADFGFSNEFTV-GGKLDAFCGAPPYAAPELFQGKKYDGPE 194
Query: 694 CDVYSFGVVALEVLMGSHPTD 714
DV+S GV+ ++ GS P D
Sbjct: 195 VDVWSLGVILYTLVSGSLPFD 215
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 94/208 (45%), Gaps = 16/208 (7%)
Query: 506 ATEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQI 564
+ E+F IG G YG VY+A+ +G++VALKK+ R +TE + E LL ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKEL 59
Query: 565 RHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALS 624
H NIVKL ++L++E++ + L++ ++A L I + L
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQD-----LKDFMDASALTGIPLPLIKSYLFQLLQ 114
Query: 625 YLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPEL 684
L + ++HRD +ADFGLAR V T Y APE+
Sbjct: 115 GLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 174
Query: 685 -----AYTMAVTEKCDVYSFGVVALEVL 707
Y+ AV D++S G + E++
Sbjct: 175 LLGCKYYSTAV----DIWSLGCIFAEMV 198
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 89/216 (41%), Gaps = 22/216 (10%)
Query: 506 ATEDFHIKY-------CIGTGGYGSVYRAQLSS----GKLVALKKLHRSETEEPAFLESF 554
+T D+ I+ CIG G +G V++ S VA+K ++ + E F
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSD--SVREKF 58
Query: 555 QTEARLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVN 614
EA + Q H +IVKL G N +++I E G L L+ V LD +
Sbjct: 59 LQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQ--VRKFSLDLASLIL 115
Query: 615 IVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVV 674
++ AL+YL VHRD + DFGL+R + DS+
Sbjct: 116 YAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTXXKASK 171
Query: 675 GT--YGYIAPELAYTMAVTEKCDVYSFGVVALEVLM 708
G ++APE T DV+ FGV E+LM
Sbjct: 172 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILM 207
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 93/204 (45%), Gaps = 20/204 (9%)
Query: 516 IGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGF 575
+G G +G V++ + ++ L K+ ++ + E + E +++Q+ H N+++LY
Sbjct: 97 LGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDK--EEVKNEISVMNQLDHANLIQLYDA 154
Query: 576 CLHNKCMFLIYEYMERGSLFC-VLRNDVEAVELD---WTKRVNIVKSMAHALSYLHYDCK 631
+ L+ EY++ G LF ++ ELD + K++ H + LH D K
Sbjct: 155 FESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLK 214
Query: 632 PS---IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYTM 688
P V+RD + DFGLAR P + GT ++APE+
Sbjct: 215 PENILCVNRDAKQIK----------IIDFGLARRYKP-REKLKVNFGTPEFLAPEVVNYD 263
Query: 689 AVTEKCDVYSFGVVALEVLMGSHP 712
V+ D++S GV+A +L G P
Sbjct: 264 FVSFPTDMWSVGVIAYMLLSGLSP 287
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 99/217 (45%), Gaps = 42/217 (19%)
Query: 516 IGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLES--FQTEARLLSQIRHRNIVKLY 573
IG G +G V+R + G+ VA+K + S E F E+ +QT +RH NI+
Sbjct: 12 IGKGRFGEVWRGKWR-GEEVAVK-IFSSREERSWFREAEIYQT-----VMLRHENIL--- 61
Query: 574 GF-CLHNK------CMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYL 626
GF NK ++L+ +Y E GSLF L VE + + S A L++L
Sbjct: 62 GFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE----GMIKLALSTASGLAHL 117
Query: 627 HYDC-----KPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTL------VVG 675
H + KP+I HRD +AD GLA + DS+ T+ VG
Sbjct: 118 HMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVG 175
Query: 676 TYGYIAPEL---AYTMAVTE---KCDVYSFGVVALEV 706
T Y+APE+ + M E + D+Y+ G+V E+
Sbjct: 176 TKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 99/217 (45%), Gaps = 42/217 (19%)
Query: 516 IGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLES--FQTEARLLSQIRHRNIVKLY 573
IG G +G V+R + G+ VA+K + S E F E+ +QT +RH NI+
Sbjct: 11 IGKGRFGEVWRGKWR-GEEVAVK-IFSSREERSWFREAEIYQT-----VMLRHENIL--- 60
Query: 574 GF-CLHNK------CMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYL 626
GF NK ++L+ +Y E GSLF L VE + + S A L++L
Sbjct: 61 GFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE----GMIKLALSTASGLAHL 116
Query: 627 HYDC-----KPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTL------VVG 675
H + KP+I HRD +AD GLA + DS+ T+ VG
Sbjct: 117 HMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVG 174
Query: 676 TYGYIAPEL---AYTMAVTE---KCDVYSFGVVALEV 706
T Y+APE+ + M E + D+Y+ G+V E+
Sbjct: 175 TKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 99/217 (45%), Gaps = 42/217 (19%)
Query: 516 IGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLES--FQTEARLLSQIRHRNIVKLY 573
IG G +G V+R + G+ VA+K + S E F E+ +QT +RH NI+
Sbjct: 14 IGKGRFGEVWRGKWR-GEEVAVK-IFSSREERSWFREAEIYQT-----VMLRHENIL--- 63
Query: 574 GF-CLHNK------CMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYL 626
GF NK ++L+ +Y E GSLF L VE + + S A L++L
Sbjct: 64 GFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE----GMIKLALSTASGLAHL 119
Query: 627 HYDC-----KPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTL------VVG 675
H + KP+I HRD +AD GLA + DS+ T+ VG
Sbjct: 120 HMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVG 177
Query: 676 TYGYIAPEL---AYTMAVTE---KCDVYSFGVVALEV 706
T Y+APE+ + M E + D+Y+ G+V E+
Sbjct: 178 TKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 90/202 (44%), Gaps = 10/202 (4%)
Query: 515 CIGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLY 573
IG G + V A+ + +GK VA+K + +++ + + F+ E R++ + H NIVKL+
Sbjct: 21 TIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLF 79
Query: 574 GFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPS 633
K ++L+ EY G +F L E + + + + A+ Y H +
Sbjct: 80 EVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAK---FRQIVSAVQYCH---QKF 133
Query: 634 IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYTMAVT-E 692
IVHRD +ADFG + + T G+ Y APEL
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTF-CGSPPYAAPELFQGKKYDGP 192
Query: 693 KCDVYSFGVVALEVLMGSHPTD 714
+ DV+S GV+ ++ GS P D
Sbjct: 193 EVDVWSLGVILYTLVSGSLPFD 214
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 89/208 (42%), Gaps = 9/208 (4%)
Query: 508 EDFHIKYCIGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRH 566
EDF +G G + + A +L++ + A+K L + + + E ++S++ H
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 567 RNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYL 626
VKLY ++ ++ Y + G L +R D T + AL YL
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK---IGSFDETCTRFYTAEIVSALEYL 146
Query: 627 HYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDS--SNRTLVVGTYGYIAPEL 684
H I+HRD + DFG A++L P+S + VGT Y++PEL
Sbjct: 147 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 203
Query: 685 AYTMAVTEKCDVYSFGVVALEVLMGSHP 712
+ + D+++ G + +++ G P
Sbjct: 204 LTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 97/227 (42%), Gaps = 40/227 (17%)
Query: 516 IGTGGYGSVYRAQ---LSSGK-----LVALKKLHRSETEEPAFLESFQTEARLLSQI-RH 566
+G G +G V A+ L K VA+K L TE+ L +E ++ I +H
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKD--LSDLISEMEMMKMIGKH 82
Query: 567 RNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLR---------------NDVEAVELDWTK 611
+NI+ L G C + +++I EY +G+L L+ N E +L
Sbjct: 83 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEE--QLSSKD 140
Query: 612 RVNIVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLH-----PD 666
V+ +A + YL +HRD +ADFGLAR +H
Sbjct: 141 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 197
Query: 667 SSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHP 712
++N L V ++APE + T + DV+SFGV+ E+ +G P
Sbjct: 198 TTNGRLPV---KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 241
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 89/209 (42%), Gaps = 24/209 (11%)
Query: 516 IGTGGYGSVYRAQLS------SGKLVALKKLHR--SETEEPAFLESFQTEARLLSQIRHR 567
+G G +G VY Q+S S VA+K L SE +E FL EA ++S+ H+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFL----MEALIISKFNHQ 108
Query: 568 NIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRND----VEAVELDWTKRVNIVKSMAHAL 623
NIV+ G L + F++ E M G L LR + L +++ + +A
Sbjct: 109 NIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 168
Query: 624 SYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVA---DFGLARLLHPDSSNRT--LVVGTYG 678
YL + +HRD VA DFG+AR ++ S R +
Sbjct: 169 QYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 225
Query: 679 YIAPELAYTMAVTEKCDVYSFGVVALEVL 707
++ PE T K D +SFGV+ E+
Sbjct: 226 WMPPEAFMEGIFTSKTDTWSFGVLLWEIF 254
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 97/210 (46%), Gaps = 13/210 (6%)
Query: 507 TEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIR 565
E ++I +G G +G V + + + + A+K ++++ + + E LL ++
Sbjct: 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKD-TSTILREVELLKKLD 79
Query: 566 HRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSY 625
H NI+KL+ + +++ E G LF + E D + I+K + ++Y
Sbjct: 80 HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAAR---IIKQVFSGITY 136
Query: 626 LHYDCKPSIVHRDXX---XXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAP 682
+H K +IVHRD + + DFGL+ ++ + +GT YIAP
Sbjct: 137 MH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDR-IGTAYYIAP 192
Query: 683 ELAYTMAVTEKCDVYSFGVVALEVLMGSHP 712
E+ EKCDV+S GV+ +L G+ P
Sbjct: 193 EVLRG-TYDEKCDVWSAGVILYILLSGTPP 221
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 90/202 (44%), Gaps = 10/202 (4%)
Query: 515 CIGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLY 573
IG G + V A+ + +GK VA+K + +++ + + F+ E R++ + H NIVKL+
Sbjct: 21 TIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLF 79
Query: 574 GFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPS 633
K ++L+ EY G +F L E + + + + A+ Y H +
Sbjct: 80 EVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAK---FRQIVSAVQYCH---QKF 133
Query: 634 IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYTMAVT-E 692
IVHRD +ADFG + + T G+ Y APEL
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTF-CGSPPYAAPELFQGKKYDGP 192
Query: 693 KCDVYSFGVVALEVLMGSHPTD 714
+ DV+S GV+ ++ GS P D
Sbjct: 193 EVDVWSLGVILYTLVSGSLPFD 214
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 87/207 (42%), Gaps = 20/207 (9%)
Query: 516 IGTGGYGSVYRAQLS------SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNI 569
+G G +G VY Q+S S VA+K L +E+ F EA ++S+ H+NI
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDEL--DFLMEALIISKFNHQNI 110
Query: 570 VKLYGFCLHNKCMFLIYEYMERGSLFCVLRND----VEAVELDWTKRVNIVKSMAHALSY 625
V+ G L + F++ E M G L LR + L +++ + +A Y
Sbjct: 111 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 170
Query: 626 LHYDCKPSIVHRDXXXXXXXXXXXXEAFVA---DFGLARLLHPDSSNRT--LVVGTYGYI 680
L + +HRD VA DFG+AR ++ S R + ++
Sbjct: 171 LEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 227
Query: 681 APELAYTMAVTEKCDVYSFGVVALEVL 707
PE T K D +SFGV+ E+
Sbjct: 228 PPEAFMEGIFTSKTDTWSFGVLLWEIF 254
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 89/209 (42%), Gaps = 24/209 (11%)
Query: 516 IGTGGYGSVYRAQLS------SGKLVALKKLHR--SETEEPAFLESFQTEARLLSQIRHR 567
+G G +G VY Q+S S VA+K L SE +E FL EA ++S+ H+
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFL----MEALIISKFNHQ 93
Query: 568 NIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRND----VEAVELDWTKRVNIVKSMAHAL 623
NIV+ G L + F++ E M G L LR + L +++ + +A
Sbjct: 94 NIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 153
Query: 624 SYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVA---DFGLARLLHPDSSNRT--LVVGTYG 678
YL + +HRD VA DFG+AR ++ S R +
Sbjct: 154 QYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 210
Query: 679 YIAPELAYTMAVTEKCDVYSFGVVALEVL 707
++ PE T K D +SFGV+ E+
Sbjct: 211 WMPPEAFMEGIFTSKTDTWSFGVLLWEIF 239
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 92/208 (44%), Gaps = 13/208 (6%)
Query: 510 FHIKYCIGTGGYGSVYRAQL----SSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIR 565
F + +G G +G V+ + SG L A+K L ++ + + + + E +L+ +
Sbjct: 30 FELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRT-KMERDILADVN 88
Query: 566 HRNIVKL-YGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALS 624
H +VKL Y F K ++LI +++ G LF L +V E D + +A L
Sbjct: 89 HPFVVKLHYAFQTEGK-LYLILDFLRGGDLFTRLSKEVMFTEEDVK---FYLAELALGLD 144
Query: 625 YLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPEL 684
+LH I++RD + DFGL++ GT Y+APE+
Sbjct: 145 HLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEV 201
Query: 685 AYTMAVTEKCDVYSFGVVALEVLMGSHP 712
+ D +S+GV+ E+L GS P
Sbjct: 202 VNRQGHSHSADWWSYGVLMFEMLTGSLP 229
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 89/209 (42%), Gaps = 24/209 (11%)
Query: 516 IGTGGYGSVYRAQLS------SGKLVALKKLHR--SETEEPAFLESFQTEARLLSQIRHR 567
+G G +G VY Q+S S VA+K L SE +E FL EA ++S+ H+
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFL----MEALIISKFNHQ 93
Query: 568 NIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRND----VEAVELDWTKRVNIVKSMAHAL 623
NIV+ G L + F++ E M G L LR + L +++ + +A
Sbjct: 94 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 153
Query: 624 SYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVA---DFGLARLLHPDSSNRT--LVVGTYG 678
YL + +HRD VA DFG+AR ++ S R +
Sbjct: 154 QYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 210
Query: 679 YIAPELAYTMAVTEKCDVYSFGVVALEVL 707
++ PE T K D +SFGV+ E+
Sbjct: 211 WMPPEAFMEGIFTSKTDTWSFGVLLWEIF 239
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 89/209 (42%), Gaps = 24/209 (11%)
Query: 516 IGTGGYGSVYRAQLS------SGKLVALKKLHR--SETEEPAFLESFQTEARLLSQIRHR 567
+G G +G VY Q+S S VA+K L SE +E FL EA ++S+ H+
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFL----MEALIISKFNHQ 85
Query: 568 NIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRND----VEAVELDWTKRVNIVKSMAHAL 623
NIV+ G L + F++ E M G L LR + L +++ + +A
Sbjct: 86 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 145
Query: 624 SYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVA---DFGLARLLHPDSSNRT--LVVGTYG 678
YL + +HRD VA DFG+AR ++ S R +
Sbjct: 146 QYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 202
Query: 679 YIAPELAYTMAVTEKCDVYSFGVVALEVL 707
++ PE T K D +SFGV+ E+
Sbjct: 203 WMPPEAFMEGIFTSKTDTWSFGVLLWEIF 231
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 110/258 (42%), Gaps = 46/258 (17%)
Query: 488 EFSIWNYDGRITFEEMIEATEDFHIKYCIGTGGYGSVYRA------QLSSGKLVALKKLH 541
+F + YD + F E+ +G+G +G V A + VA+K L
Sbjct: 30 DFREYEYDLKWEF-----PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKML- 83
Query: 542 RSETEEPAFLESFQTEARLLSQI-RHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRN 600
E + + E+ +E ++++Q+ H NIV L G C + ++LI+EY G L LR+
Sbjct: 84 -KEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRS 142
Query: 601 DVEA-----VELDWTKRVN---------------IVKSMAHALSYLHYDCKPSIVHRDXX 640
E +E + KR+ +A + +L + S VHRD
Sbjct: 143 KREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF---KSCVHRDLA 199
Query: 641 XXXXXXXXXXEAFVADFGLARLLHPDSS-----NRTLVVGTYGYIAPELAYTMAVTEKCD 695
+ DFGLAR + DS+ N L V ++APE + T K D
Sbjct: 200 ARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPV---KWMAPESLFEGIYTIKSD 256
Query: 696 VYSFGVVALEVL-MGSHP 712
V+S+G++ E+ +G +P
Sbjct: 257 VWSYGILLWEIFSLGVNP 274
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 93/208 (44%), Gaps = 16/208 (7%)
Query: 506 ATEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQI 564
+ E+F IG G YG VY+A+ +G++VALKK+ R +TE + E LL ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKEL 62
Query: 565 RHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALS 624
H NIVKL ++L++E++ + L+ ++A L I + L
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLHQD-----LKTFMDASALTGIPLPLIKSYLFQLLQ 117
Query: 625 YLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPEL 684
L + ++HRD +ADFGLAR V T Y APE+
Sbjct: 118 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 177
Query: 685 -----AYTMAVTEKCDVYSFGVVALEVL 707
Y+ AV D++S G + E++
Sbjct: 178 LLGCKYYSTAV----DIWSLGCIFAEMV 201
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 93/208 (44%), Gaps = 16/208 (7%)
Query: 506 ATEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQI 564
+ E+F IG G YG VY+A+ +G++VALKK+ R +TE + E LL ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKEL 62
Query: 565 RHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALS 624
H NIVKL ++L++E++ + L+ ++A L I + L
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLHQD-----LKKFMDASALTGIPLPLIKSYLFQLLQ 117
Query: 625 YLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPEL 684
L + ++HRD +ADFGLAR V T Y APE+
Sbjct: 118 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 177
Query: 685 -----AYTMAVTEKCDVYSFGVVALEVL 707
Y+ AV D++S G + E++
Sbjct: 178 LLGCKYYSTAV----DIWSLGCIFAEMV 201
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 89/209 (42%), Gaps = 24/209 (11%)
Query: 516 IGTGGYGSVYRAQLS------SGKLVALKKLHR--SETEEPAFLESFQTEARLLSQIRHR 567
+G G +G VY Q+S S VA+K L SE +E FL EA ++S+ H+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFL----MEALIISKFNHQ 94
Query: 568 NIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRND----VEAVELDWTKRVNIVKSMAHAL 623
NIV+ G L + F++ E M G L LR + L +++ + +A
Sbjct: 95 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 154
Query: 624 SYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVA---DFGLARLLHPDSSNRT--LVVGTYG 678
YL + +HRD VA DFG+AR ++ S R +
Sbjct: 155 QYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 211
Query: 679 YIAPELAYTMAVTEKCDVYSFGVVALEVL 707
++ PE T K D +SFGV+ E+
Sbjct: 212 WMPPEAFMEGIFTSKTDTWSFGVLLWEIF 240
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 101/237 (42%), Gaps = 22/237 (9%)
Query: 488 EFSIWNYDGRITFEEMIEATEDFHIKYCIGTGGYGSVYRAQL-SSGKLVALKKLHRSETE 546
EF W +EM EDF I IG G +G V ++ ++ ++ A+K L++ E
Sbjct: 70 EFLEWAKPFTQLVKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEML 129
Query: 547 EPAFLESFQTEARLLSQIRHRNIVKL-YGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAV 605
+ A F+ E +L + I L Y F N ++L+ +Y G L +L + +
Sbjct: 130 KRAETACFREERDVLVNGDCQWITALHYAFQDENH-LYLVMDYYVGGDLLTLLSKFEDKL 188
Query: 606 ELDWTK----RVNIVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLAR 661
D + + + H L Y+H D KP V D +ADFG
Sbjct: 189 PEDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIR---------LADFGSCL 239
Query: 662 LLHPDSS-NRTLVVGTYGYIAPELAYTM-----AVTEKCDVYSFGVVALEVLMGSHP 712
++ D + ++ VGT YI+PE+ M +CD +S GV E+L G P
Sbjct: 240 KMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 296
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 97/227 (42%), Gaps = 40/227 (17%)
Query: 516 IGTGGYGSVYRAQ---LSSGK-----LVALKKLHRSETEEPAFLESFQTEARLLSQI-RH 566
+G G +G V A+ L K VA+K L TE+ L +E ++ I +H
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKD--LSDLISEMEMMKMIGKH 93
Query: 567 RNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLR---------------NDVEAVELDWTK 611
+NI+ L G C + +++I EY +G+L L+ N E +L
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEE--QLSSKD 151
Query: 612 RVNIVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLH-----PD 666
V+ +A + YL +HRD +ADFGLAR +H
Sbjct: 152 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 208
Query: 667 SSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHP 712
++N L V ++APE + T + DV+SFGV+ E+ +G P
Sbjct: 209 TTNGRLPV---KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 252
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 89/209 (42%), Gaps = 24/209 (11%)
Query: 516 IGTGGYGSVYRAQLS------SGKLVALKKLHR--SETEEPAFLESFQTEARLLSQIRHR 567
+G G +G VY Q+S S VA+K L SE +E FL EA ++S+ H+
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFL----MEALIISKFNHQ 110
Query: 568 NIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRND----VEAVELDWTKRVNIVKSMAHAL 623
NIV+ G L + F++ E M G L LR + L +++ + +A
Sbjct: 111 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 170
Query: 624 SYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVA---DFGLARLLHPDSSNRT--LVVGTYG 678
YL + +HRD VA DFG+AR ++ S R +
Sbjct: 171 QYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 227
Query: 679 YIAPELAYTMAVTEKCDVYSFGVVALEVL 707
++ PE T K D +SFGV+ E+
Sbjct: 228 WMPPEAFMEGIFTSKTDTWSFGVLLWEIF 256
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 93/208 (44%), Gaps = 16/208 (7%)
Query: 506 ATEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQI 564
+ E+F IG G YG VY+A+ +G++VALKK+ R +TE + E LL ++
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKEL 63
Query: 565 RHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALS 624
H NIVKL ++L++E++ + L+ ++A L I + L
Sbjct: 64 NHPNIVKLLDVIHTENKLYLVFEFLHQD-----LKKFMDASALTGIPLPLIKSYLFQLLQ 118
Query: 625 YLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPEL 684
L + ++HRD +ADFGLAR V T Y APE+
Sbjct: 119 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 178
Query: 685 -----AYTMAVTEKCDVYSFGVVALEVL 707
Y+ AV D++S G + E++
Sbjct: 179 LLGCKYYSTAV----DIWSLGCIFAEMV 202
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 93/208 (44%), Gaps = 16/208 (7%)
Query: 506 ATEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQI 564
+ E+F IG G YG VY+A+ +G++VALKK+ R +TE + E LL ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKEL 62
Query: 565 RHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALS 624
H NIVKL ++L++E++ + L+ ++A L I + L
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLHQD-----LKKFMDASALTGIPLPLIKSYLFQLLQ 117
Query: 625 YLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPEL 684
L + ++HRD +ADFGLAR V T Y APE+
Sbjct: 118 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 177
Query: 685 -----AYTMAVTEKCDVYSFGVVALEVL 707
Y+ AV D++S G + E++
Sbjct: 178 LLGCKYYSTAV----DIWSLGCIFAEMV 201
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 93/208 (44%), Gaps = 16/208 (7%)
Query: 506 ATEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQI 564
+ E+F IG G YG VY+A+ +G++VALKK+ R +TE + E LL ++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKEL 61
Query: 565 RHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALS 624
H NIVKL ++L++E++ + L+ ++A L I + L
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFLHQD-----LKKFMDASALTGIPLPLIKSYLFQLLQ 116
Query: 625 YLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPEL 684
L + ++HRD +ADFGLAR V T Y APE+
Sbjct: 117 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 176
Query: 685 -----AYTMAVTEKCDVYSFGVVALEVL 707
Y+ AV D++S G + E++
Sbjct: 177 LLGCKYYSTAV----DIWSLGCIFAEMV 200
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 101/237 (42%), Gaps = 22/237 (9%)
Query: 488 EFSIWNYDGRITFEEMIEATEDFHIKYCIGTGGYGSVYRAQL-SSGKLVALKKLHRSETE 546
EF W +EM EDF I IG G +G V ++ ++ ++ A+K L++ E
Sbjct: 54 EFLEWAKPFTQLVKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEML 113
Query: 547 EPAFLESFQTEARLLSQIRHRNIVKL-YGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAV 605
+ A F+ E +L + I L Y F N ++L+ +Y G L +L + +
Sbjct: 114 KRAETACFREERDVLVNGDCQWITALHYAFQDENH-LYLVMDYYVGGDLLTLLSKFEDKL 172
Query: 606 ELDWTK----RVNIVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLAR 661
D + + + H L Y+H D KP V D +ADFG
Sbjct: 173 PEDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIR---------LADFGSCL 223
Query: 662 LLHPDSS-NRTLVVGTYGYIAPELAYTM-----AVTEKCDVYSFGVVALEVLMGSHP 712
++ D + ++ VGT YI+PE+ M +CD +S GV E+L G P
Sbjct: 224 KMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 280
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 97/227 (42%), Gaps = 40/227 (17%)
Query: 516 IGTGGYGSVYRAQ---LSSGK-----LVALKKLHRSETEEPAFLESFQTEARLLSQI-RH 566
+G G +G V A+ L K VA+K L TE+ L +E ++ I +H
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKD--LSDLISEMEMMKMIGKH 85
Query: 567 RNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLR---------------NDVEAVELDWTK 611
+NI+ L G C + +++I EY +G+L L+ N E +L
Sbjct: 86 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEE--QLSSKD 143
Query: 612 RVNIVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLH-----PD 666
V+ +A + YL +HRD +ADFGLAR +H
Sbjct: 144 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 200
Query: 667 SSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHP 712
++N L V ++APE + T + DV+SFGV+ E+ +G P
Sbjct: 201 TTNGRLPV---KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 244
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 93/208 (44%), Gaps = 16/208 (7%)
Query: 506 ATEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQI 564
+ E+F IG G YG VY+A+ +G++VALKK+ R +TE + E LL ++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKEL 61
Query: 565 RHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALS 624
H NIVKL ++L++E++ + L+ ++A L I + L
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFLHQD-----LKKFMDASALTGIPLPLIKSYLFQLLQ 116
Query: 625 YLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPEL 684
L + ++HRD +ADFGLAR V T Y APE+
Sbjct: 117 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 176
Query: 685 -----AYTMAVTEKCDVYSFGVVALEVL 707
Y+ AV D++S G + E++
Sbjct: 177 LLGCKYYSTAV----DIWSLGCIFAEMV 200
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 93/208 (44%), Gaps = 16/208 (7%)
Query: 506 ATEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQI 564
+ E+F IG G YG VY+A+ +G++VALKK+ R +TE + E LL ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKEL 59
Query: 565 RHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALS 624
H NIVKL ++L++E++ + L+ ++A L I + L
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQD-----LKKFMDASALTGIPLPLIKSYLFQLLQ 114
Query: 625 YLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPEL 684
L + ++HRD +ADFGLAR V T Y APE+
Sbjct: 115 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 174
Query: 685 -----AYTMAVTEKCDVYSFGVVALEVL 707
Y+ AV D++S G + E++
Sbjct: 175 LLGCKYYSTAV----DIWSLGCIFAEMV 198
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 93/208 (44%), Gaps = 16/208 (7%)
Query: 506 ATEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQI 564
+ E+F IG G YG VY+A+ +G++VALKK+ R +TE + E LL ++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKEL 60
Query: 565 RHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALS 624
H NIVKL ++L++E++ + L+ ++A L I + L
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLHQD-----LKKFMDASALTGIPLPLIKSYLFQLLQ 115
Query: 625 YLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPEL 684
L + ++HRD +ADFGLAR V T Y APE+
Sbjct: 116 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 175
Query: 685 -----AYTMAVTEKCDVYSFGVVALEVL 707
Y+ AV D++S G + E++
Sbjct: 176 LLGCKYYSTAV----DIWSLGCIFAEMV 199
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 93/208 (44%), Gaps = 16/208 (7%)
Query: 506 ATEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQI 564
+ E+F IG G YG VY+A+ +G++VALKK+ R +TE + E LL ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKEL 59
Query: 565 RHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALS 624
H NIVKL ++L++E++ + L+ ++A L I + L
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQD-----LKKFMDASALTGIPLPLIKSYLFQLLQ 114
Query: 625 YLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPEL 684
L + ++HRD +ADFGLAR V T Y APE+
Sbjct: 115 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 174
Query: 685 -----AYTMAVTEKCDVYSFGVVALEVL 707
Y+ AV D++S G + E++
Sbjct: 175 LLGCKYYSTAV----DIWSLGCIFAEMV 198
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 91/205 (44%), Gaps = 24/205 (11%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
+G+G YG+V A +G VA+KKL+R E F + E RLL +RH N++ L
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSE-LFAKRAYRELRLLKHMRHENVIGLLD 91
Query: 575 FCLHNKCM------FLIYEYM--ERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYL 626
++ + +L+ +M + G L + + ++ +V M L Y+
Sbjct: 92 VFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQF-------LVYQMLKGLRYI 144
Query: 627 HYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAY 686
H I+HRD E + DFGLAR DS VV T Y APE+
Sbjct: 145 H---AAGIIHRDLKPGNLAVNEDCELKILDFGLAR--QADSEMXGXVV-TRWYRAPEVIL 198
Query: 687 T-MAVTEKCDVYSFGVVALEVLMGS 710
M T+ D++S G + E++ G
Sbjct: 199 NWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|2OMV|A Chain A, Crystal Structure Of Inla S192n Y369s/hec1 Complex
pdb|2OMW|A Chain A, Crystal Structure Of Inla S192n Y369s/mec1 Complex
Length = 461
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 86/265 (32%), Positives = 124/265 (46%), Gaps = 26/265 (9%)
Query: 31 LSGRMPSEIGALSKLEKLVLSH--NSLTGRIPSEIGALSRLKVLDLSYNRLTGTIPSEXX 88
LS S+I ALS L L + N +T P + L+ L+ LD+S N+++ S
Sbjct: 136 LSSNTISDISALSGLTSLQQLNFGNQVTDLKP--LANLTTLERLDISSNKVSDI--SVLA 191
Query: 89 XXXXXXXXXXXXXXXXXXXPLEFGNLKDLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLSL 148
PL G L +LD+L L GN+L + ++ +LTNLT LDL+
Sbjct: 192 KLTNLESLIATNNQISDITPL--GILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLAN 247
Query: 149 NQLSGRLPQEVGNLKNLKSLFLDNNHLSGPIPSTLYHLNQLATLCLGYNKL--VGPVTKE 206
NQ+S P + L L L L N +S P L L L L L N+L + P++
Sbjct: 248 NQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISPIS-- 301
Query: 207 VGNMKNLDRLHLNGNNLTGSIPSTIGYLNLLDELHLSHNRLDGPIPPTIGNLTNLIALDL 266
N+KNL L L NN++ P + L L L S+N++ ++ NLTN+ L
Sbjct: 302 --NLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFSNNKVSDV--SSLANLTNINWLSA 355
Query: 267 SSNQLSGLLPREVGNLKYLASLSLN 291
NQ+S L P + NL + L LN
Sbjct: 356 GHNQISDLTP--LANLTRITQLGLN 378
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 95/201 (47%), Gaps = 33/201 (16%)
Query: 113 NLKDLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNLKSLFLDN 172
NL L + + N++ + P + NLTNLT L L NQ++ P + NL NL L L +
Sbjct: 83 NLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSS 138
Query: 173 NHLSGPIPSTLYHLNQLATLCLGYNKLVGPVTKEVGNMKNLDRLHLNGN----------- 221
N +S S L L L L G N++ K + N+ L+RL ++ N
Sbjct: 139 NTISDI--SALSGLTSLQQLNFG-NQVTD--LKPLANLTTLERLDISSNKVSDISVLAKL 193
Query: 222 -NLTGSIPST--------IGYLNLLDELHLSHNRLDGPIPPTIGNLTNLIALDLSSNQLS 272
NL I + +G L LDEL L+ N+L T+ +LTNL LDL++NQ+S
Sbjct: 194 TNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQIS 251
Query: 273 GLLPREVGNLKYLASLSLNGN 293
L P + L L L L N
Sbjct: 252 NLAP--LSGLTKLTELKLGAN 270
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 95/202 (47%), Gaps = 34/202 (16%)
Query: 116 DLDQLR-LQGNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNLKSLFLDNNH 174
DLDQ+ LQ ++L + L NLT ++ S NQL+ P + NL L + ++NN
Sbjct: 39 DLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQ 96
Query: 175 LSGPIPSTLYHLNQLATLCLGYNKLVGPVTKEVGNMKNLDRLHLN--------------- 219
++ P L +L L L L N++ + N+ NL+RL L+
Sbjct: 97 IADITP--LANLTNLTGLTLFNNQITD--IDPLKNLTNLNRLELSSNTISDISALSGLTS 152
Query: 220 ------GNNLTGSIPSTIGYLNLLDELHLSHNRLDGPIPPTIGNLTNLIALDLSSNQLSG 273
GN +T P + L L+ L +S N++ + LTNL +L ++NQ+S
Sbjct: 153 LQQLNFGNQVTDLKP--LANLTTLERLDISSNKVSD--ISVLAKLTNLESLIATNNQISD 208
Query: 274 LLPREVGNLKYLASLSLNGNIL 295
+ P +G L L LSLNGN L
Sbjct: 209 ITP--LGILTNLDELSLNGNQL 228
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 89/209 (42%), Gaps = 24/209 (11%)
Query: 516 IGTGGYGSVYRAQLS------SGKLVALKKLHR--SETEEPAFLESFQTEARLLSQIRHR 567
+G G +G VY Q+S S VA+K L SE +E FL EA ++S+ H+
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFL----MEALIISKFNHQ 100
Query: 568 NIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRND----VEAVELDWTKRVNIVKSMAHAL 623
NIV+ G L + F++ E M G L LR + L +++ + +A
Sbjct: 101 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 160
Query: 624 SYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVA---DFGLARLLHPDSSNRT--LVVGTYG 678
YL + +HRD VA DFG+AR ++ S R +
Sbjct: 161 QYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 217
Query: 679 YIAPELAYTMAVTEKCDVYSFGVVALEVL 707
++ PE T K D +SFGV+ E+
Sbjct: 218 WMPPEAFMEGIFTSKTDTWSFGVLLWEIF 246
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 89/209 (42%), Gaps = 24/209 (11%)
Query: 516 IGTGGYGSVYRAQLS------SGKLVALKKLHR--SETEEPAFLESFQTEARLLSQIRHR 567
+G G +G VY Q+S S VA+K L SE +E FL EA ++S+ H+
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFL----MEALIISKFNHQ 120
Query: 568 NIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRND----VEAVELDWTKRVNIVKSMAHAL 623
NIV+ G L + F++ E M G L LR + L +++ + +A
Sbjct: 121 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 180
Query: 624 SYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVA---DFGLARLLHPDSSNRT--LVVGTYG 678
YL + +HRD VA DFG+AR ++ S R +
Sbjct: 181 QYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 237
Query: 679 YIAPELAYTMAVTEKCDVYSFGVVALEVL 707
++ PE T K D +SFGV+ E+
Sbjct: 238 WMPPEAFMEGIFTSKTDTWSFGVLLWEIF 266
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 94/208 (45%), Gaps = 16/208 (7%)
Query: 506 ATEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQI 564
+ E+F IG G YG VY+A+ +G++VALKK+ R +TE + E LL ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKEL 62
Query: 565 RHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALS 624
H NIVKL ++L++E++++ L+ ++A L I + L
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEHVDQD-----LKKFMDASALTGIPLPLIKSYLFQLLQ 117
Query: 625 YLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPEL 684
L + ++HRD +ADFGLAR V T Y APE+
Sbjct: 118 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 177
Query: 685 -----AYTMAVTEKCDVYSFGVVALEVL 707
Y+ AV D++S G + E++
Sbjct: 178 LLGCKYYSTAV----DIWSLGCIFAEMV 201
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 94/224 (41%), Gaps = 34/224 (15%)
Query: 516 IGTGGYGSVYRAQ---LSSGK-----LVALKKLHRSETEEPAFLESFQTEARLLSQI-RH 566
+G G +G V A+ L K VA+K L TE+ L +E ++ I +H
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKD--LSDLISEMEMMKMIGKH 86
Query: 567 RNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLR---------------NDVEAVELDWTK 611
+NI+ L G C + +++I EY +G+L L+ N E +L
Sbjct: 87 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEE--QLSSKD 144
Query: 612 RVNIVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRT 671
V+ +A + YL +HRD +ADFGLAR +H +
Sbjct: 145 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 201
Query: 672 LVVGT--YGYIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHP 712
G ++APE + T + DV+SFGV+ E+ +G P
Sbjct: 202 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 245
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 97/214 (45%), Gaps = 15/214 (7%)
Query: 503 MIEATEDFHIKYCIGTGGYGSVYRAQ--LSSGKLVALKKLHRSETEEPAFLESFQTEA-- 558
+ A + + IG G YG V++A+ + G+ VALK++ EE L + + A
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 559 RLLSQIRHRNIVKLYGFCLHNKC-----MFLIYEYMERGSLFCVLRNDVEAVELDWTKRV 613
R L H N+V+L+ C ++ + L++E++++ + + V + K
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIK-- 123
Query: 614 NIVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLV 673
+++ + L +LH +VHRD + +ADFGLAR ++ T V
Sbjct: 124 DMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLAR-IYSFQMALTSV 179
Query: 674 VGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVL 707
V T Y APE+ + D++S G + E+
Sbjct: 180 VVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 93/208 (44%), Gaps = 16/208 (7%)
Query: 506 ATEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQI 564
+ E+F IG G YG VY+A+ +G++VALKK+ R +TE + E LL ++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKEL 61
Query: 565 RHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALS 624
H NIVKL ++L++E++ + L+ ++A L I + L
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFLHQD-----LKKFMDASALTGIPLPLIKSYLFQLLQ 116
Query: 625 YLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPEL 684
L + ++HRD +ADFGLAR V T Y APE+
Sbjct: 117 GLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 176
Query: 685 -----AYTMAVTEKCDVYSFGVVALEVL 707
Y+ AV D++S G + E++
Sbjct: 177 LLGCKYYSTAV----DIWSLGCIFAEMV 200
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 93/208 (44%), Gaps = 16/208 (7%)
Query: 506 ATEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQI 564
+ E+F IG G YG VY+A+ +G++VALKK+ R +TE + E LL ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKEL 62
Query: 565 RHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALS 624
H NIVKL ++L++E++ L++ ++A L I + L
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLSMD-----LKDFMDASALTGIPLPLIKSYLFQLLQ 117
Query: 625 YLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPEL 684
L + ++HRD +ADFGLAR V T Y APE+
Sbjct: 118 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 177
Query: 685 -----AYTMAVTEKCDVYSFGVVALEVL 707
Y+ AV D++S G + E++
Sbjct: 178 LLGCKYYSTAV----DIWSLGCIFAEMV 201
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 93/208 (44%), Gaps = 16/208 (7%)
Query: 506 ATEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQI 564
+ E+F IG G YG VY+A+ +G++VALKK+ R +TE + E LL ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKEL 59
Query: 565 RHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALS 624
H NIVKL ++L++E++ + L+ ++A L I + L
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQD-----LKKFMDASALTGIPLPLIKSYLFQLLQ 114
Query: 625 YLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPEL 684
L + ++HRD +ADFGLAR V T Y APE+
Sbjct: 115 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 174
Query: 685 -----AYTMAVTEKCDVYSFGVVALEVL 707
Y+ AV D++S G + E++
Sbjct: 175 LLGCKYYSTAV----DIWSLGCIFAEMV 198
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 92/206 (44%), Gaps = 16/206 (7%)
Query: 508 EDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRH 566
E+F IG G YG VY+A+ +G++VALKK+ R +TE + E LL ++ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNH 60
Query: 567 RNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYL 626
NIVKL ++L++E++ + L+ ++A L I + L L
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQD-----LKKFMDASALTGIPLPLIKSYLFQLLQGL 115
Query: 627 HYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPEL-- 684
+ ++HRD +ADFGLAR V T Y APE+
Sbjct: 116 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 175
Query: 685 ---AYTMAVTEKCDVYSFGVVALEVL 707
Y+ AV D++S G + E++
Sbjct: 176 GCKYYSTAV----DIWSLGCIFAEMV 197
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 93/208 (44%), Gaps = 16/208 (7%)
Query: 506 ATEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQI 564
+ E+F IG G YG VY+A+ +G++VALKK+ R +TE + E LL ++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKEL 60
Query: 565 RHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALS 624
H NIVKL ++L++E++ + L+ ++A L I + L
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLHQD-----LKKFMDASALTGIPLPLIKSYLFQLLQ 115
Query: 625 YLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPEL 684
L + ++HRD +ADFGLAR V T Y APE+
Sbjct: 116 GLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 175
Query: 685 -----AYTMAVTEKCDVYSFGVVALEVL 707
Y+ AV D++S G + E++
Sbjct: 176 LLGCKYYSTAV----DIWSLGCIFAEMV 199
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 88/213 (41%), Gaps = 16/213 (7%)
Query: 510 FHIKYCIGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRN 568
+ +K +GTGG+G V R +G+ VA+K+ + + P E + E +++ ++ H N
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELS--PKNRERWCLEIQIMKKLNHPN 73
Query: 569 IVKLYGF------CLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHA 622
+V N L EY E G L L L ++ ++ A
Sbjct: 74 VVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSA 133
Query: 623 LSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFV---ADFGLARLLHPDSSNRTLVVGTYGY 679
L YLH + I+HRD + + D G A+ L T VGT Y
Sbjct: 134 LRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELC-TEFVGTLQY 189
Query: 680 IAPELAYTMAVTEKCDVYSFGVVALEVLMGSHP 712
+APEL T D +SFG +A E + G P
Sbjct: 190 LAPELLEQKKYTVTVDYWSFGTLAFECITGFRP 222
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 88/213 (41%), Gaps = 16/213 (7%)
Query: 510 FHIKYCIGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRN 568
+ +K +GTGG+G V R +G+ VA+K+ + + P E + E +++ ++ H N
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELS--PKNRERWCLEIQIMKKLNHPN 74
Query: 569 IVKLYGF------CLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHA 622
+V N L EY E G L L L ++ ++ A
Sbjct: 75 VVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSA 134
Query: 623 LSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFV---ADFGLARLLHPDSSNRTLVVGTYGY 679
L YLH + I+HRD + + D G A+ L T VGT Y
Sbjct: 135 LRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELC-TEFVGTLQY 190
Query: 680 IAPELAYTMAVTEKCDVYSFGVVALEVLMGSHP 712
+APEL T D +SFG +A E + G P
Sbjct: 191 LAPELLEQKKYTVTVDYWSFGTLAFECITGFRP 223
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 92/206 (44%), Gaps = 16/206 (7%)
Query: 508 EDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRH 566
E+F IG G YG VY+A+ +G++VAL K+ R +TE + E LL ++ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKI-RLDTETEGVPSTAIREISLLKELNH 61
Query: 567 RNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYL 626
NIVKL ++L++E++ + L+ ++A L I + L L
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQD-----LKKFMDASALTGIPLPLIKSYLFQLLQGL 116
Query: 627 HYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPEL-- 684
+ ++HRD +ADFGLAR T V T Y APE+
Sbjct: 117 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 176
Query: 685 ---AYTMAVTEKCDVYSFGVVALEVL 707
Y+ AV D++S G + E++
Sbjct: 177 GCKYYSTAV----DIWSLGCIFAEMV 198
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 92/206 (44%), Gaps = 16/206 (7%)
Query: 508 EDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRH 566
E+F IG G YG VY+A+ +G++VALKK+ R +TE + E LL ++ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNH 60
Query: 567 RNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYL 626
NIVKL ++L++E++ + L+ ++A L I + L L
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQD-----LKKFMDASALTGIPLPLIKSYLFQLLQGL 115
Query: 627 HYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPEL-- 684
+ ++HRD +ADFGLAR V T Y APE+
Sbjct: 116 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 175
Query: 685 ---AYTMAVTEKCDVYSFGVVALEVL 707
Y+ AV D++S G + E++
Sbjct: 176 GCKYYSTAV----DIWSLGCIFAEMV 197
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 92/206 (44%), Gaps = 16/206 (7%)
Query: 508 EDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRH 566
E+F IG G YG VY+A+ +G++VAL K+ R +TE + E LL ++ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKI-RLDTETEGVPSTAIREISLLKELNH 60
Query: 567 RNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYL 626
NIVKL ++L++E++ + L+ ++A L I + L L
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQD-----LKKFMDASALTGIPLPLIKSYLFQLLQGL 115
Query: 627 HYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPEL-- 684
+ ++HRD +ADFGLAR T V T Y APE+
Sbjct: 116 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 175
Query: 685 ---AYTMAVTEKCDVYSFGVVALEVL 707
Y+ AV D++S G + E++
Sbjct: 176 GCKYYSTAV----DIWSLGCIFAEMV 197
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 93/208 (44%), Gaps = 16/208 (7%)
Query: 506 ATEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQI 564
+ E+F IG G YG VY+A+ +G++VALKK+ R +TE + E LL ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKEL 59
Query: 565 RHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALS 624
H NIVKL ++L++E++ + L+ ++A L I + L
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQD-----LKKFMDASALTGIPLPLIKSYLFQLLQ 114
Query: 625 YLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPEL 684
L + ++HRD +ADFGLAR V T Y APE+
Sbjct: 115 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 174
Query: 685 -----AYTMAVTEKCDVYSFGVVALEVL 707
Y+ AV D++S G + E++
Sbjct: 175 LLGCKYYSTAV----DIWSLGCIFAEMV 198
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 89/216 (41%), Gaps = 22/216 (10%)
Query: 506 ATEDFHIKY-------CIGTGGYGSVYRAQLSS----GKLVALKKLHRSETEEPAFLESF 554
+T D+ I+ CIG G +G V++ S VA+K ++ + E F
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSD--SVREKF 58
Query: 555 QTEARLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVN 614
EA + Q H +IVKL G N +++I E G L L+ V LD +
Sbjct: 59 LQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQ--VRKFSLDLASLIL 115
Query: 615 IVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVV 674
++ AL+YL VHRD + DFGL+R + DS+
Sbjct: 116 YAYQLSTALAYLE---SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYME-DSTYYKASK 171
Query: 675 GT--YGYIAPELAYTMAVTEKCDVYSFGVVALEVLM 708
G ++APE T DV+ FGV E+LM
Sbjct: 172 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILM 207
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 92/206 (44%), Gaps = 16/206 (7%)
Query: 508 EDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRH 566
E+F IG G YG VY+A+ +G++VALKK+ R +TE + E LL ++ H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNH 62
Query: 567 RNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYL 626
NIVKL ++L++E++ + L+ ++A L I + L L
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFLHQD-----LKKFMDASALTGIPLPLIKSYLFQLLQGL 117
Query: 627 HYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPEL-- 684
+ ++HRD +ADFGLAR V T Y APE+
Sbjct: 118 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 177
Query: 685 ---AYTMAVTEKCDVYSFGVVALEVL 707
Y+ AV D++S G + E++
Sbjct: 178 GCKYYSTAV----DIWSLGCIFAEMV 199
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 93/208 (44%), Gaps = 16/208 (7%)
Query: 506 ATEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQI 564
+ E+F IG G YG VY+A+ +G++VALKK+ R +TE + E LL ++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKEL 61
Query: 565 RHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALS 624
H NIVKL ++L++E++ L++ ++A L I + L
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFLSMD-----LKDFMDASALTGIPLPLIKSYLFQLLQ 116
Query: 625 YLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPEL 684
L + ++HRD +ADFGLAR V T Y APE+
Sbjct: 117 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 176
Query: 685 -----AYTMAVTEKCDVYSFGVVALEVL 707
Y+ AV D++S G + E++
Sbjct: 177 LLGCKYYSTAV----DIWSLGCIFAEMV 200
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 91/219 (41%), Gaps = 22/219 (10%)
Query: 503 MIEATEDFHIKY-------CIGTGGYGSVYRAQLSSGK----LVALKKLHRSETEEPAFL 551
M +T D+ I+ CIG G +G V++ S + VA+K ++ +
Sbjct: 26 MGSSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSD--SVR 83
Query: 552 ESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTK 611
E F EA + Q H +IVKL G N +++I E G L L+ V LD
Sbjct: 84 EKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQ--VRKYSLDLAS 140
Query: 612 RVNIVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRT 671
+ ++ AL+YL VHRD + DFGL+R + DS+
Sbjct: 141 LILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYK 196
Query: 672 LVVGT--YGYIAPELAYTMAVTEKCDVYSFGVVALEVLM 708
G ++APE T DV+ FGV E+LM
Sbjct: 197 ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILM 235
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 89/216 (41%), Gaps = 22/216 (10%)
Query: 506 ATEDFHIKY-------CIGTGGYGSVYRAQLSS----GKLVALKKLHRSETEEPAFLESF 554
+T D+ I+ CIG G +G V++ S VA+K ++ + E F
Sbjct: 381 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSD--SVREKF 438
Query: 555 QTEARLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVN 614
EA + Q H +IVKL G N +++I E G L L+ V LD +
Sbjct: 439 LQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQ--VRKFSLDLASLIL 495
Query: 615 IVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVV 674
++ AL+YL VHRD + DFGL+R + DS+
Sbjct: 496 YAYQLSTALAYLE---SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYME-DSTYYKASK 551
Query: 675 GT--YGYIAPELAYTMAVTEKCDVYSFGVVALEVLM 708
G ++APE T DV+ FGV E+LM
Sbjct: 552 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILM 587
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 89/197 (45%), Gaps = 12/197 (6%)
Query: 516 IGTGGYGSVYRA--QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLY 573
+G+G +G+V + Q+ K+ ++E +PA + EA ++ Q+ + IV++
Sbjct: 377 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 436
Query: 574 GFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPS 633
G C M L+ E E G L L+ + + + + +V ++ + YL + +
Sbjct: 437 GICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKN---IIELVHQVSMGMKYLE---ESN 489
Query: 634 IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSS-NRTLVVGTY--GYIAPELAYTMAV 690
VHRD A ++DFGL++ L D + + G + + APE
Sbjct: 490 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF 549
Query: 691 TEKCDVYSFGVVALEVL 707
+ K DV+SFGV+ E
Sbjct: 550 SSKSDVWSFGVLMWEAF 566
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 94/218 (43%), Gaps = 44/218 (20%)
Query: 516 IGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGF 575
IG G YG V+ + G+ VA+K TEE ++ +TE +RH NI+ GF
Sbjct: 45 IGKGRYGEVWMGKWR-GEKVAVKVFF--TTEEASWFR--ETEIYQTVLMRHENIL---GF 96
Query: 576 CLHN-------KCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHY 628
+ ++LI +Y E GSL+ L+ + LD + + S L +LH
Sbjct: 97 IAADIKGTGSWTQLYLITDYHENGSLYDYLK----STTLDAKSMLKLAYSSVSGLCHLHT 152
Query: 629 DC-----KPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTL----VVGTYGY 679
+ KP+I HRD +AD GLA D++ + VGT Y
Sbjct: 153 EIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRY 212
Query: 680 IAPEL-----------AYTMAVTEKCDVYSFGVVALEV 706
+ PE+ +Y MA D+YSFG++ EV
Sbjct: 213 MPPEVLDESLNRNHFQSYIMA-----DMYSFGLILWEV 245
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 98/214 (45%), Gaps = 15/214 (7%)
Query: 503 MIEATEDFHIKYCIGTGGYGSVYRAQ--LSSGKLVALKKLHRSETEEPAFLESFQTEA-- 558
+ A + + IG G YG V++A+ + G+ VALK++ EE L + + A
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 559 RLLSQIRHRNIVKLYGFCLHNKC-----MFLIYEYMERGSLFCVLRNDVEAVELDWTKRV 613
R L H N+V+L+ C ++ + L++E++++ + + V + K
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIK-- 123
Query: 614 NIVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLV 673
+++ + L +LH +VHRD + +ADFGLAR+ + ++V
Sbjct: 124 DMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVV 180
Query: 674 VGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVL 707
V T Y APE+ + D++S G + E+
Sbjct: 181 V-TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 98/230 (42%), Gaps = 41/230 (17%)
Query: 516 IGTGGYGSVYRA-QLSSGK-----LVALKKLHRSETEEPAFLESFQTEARLLSQI-RHRN 568
+G G +G V A GK VA+K L + + E+ +E +++S + +H N
Sbjct: 39 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEK--EALMSELKIMSHLGQHEN 96
Query: 569 IVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAV--------------------ELD 608
IV L G C H + +I EY G L LR EA+ L+
Sbjct: 97 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLE 156
Query: 609 WTKRVNIVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSS 668
++ +A +++L + +HRD A + DFGLAR + DS+
Sbjct: 157 LRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN 213
Query: 669 -----NRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHP 712
N L V ++APE + T + DV+S+G++ E+ +G +P
Sbjct: 214 YIVKGNARLPV---KWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNP 260
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 89/197 (45%), Gaps = 12/197 (6%)
Query: 516 IGTGGYGSVYRA--QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLY 573
+G+G +G+V + Q+ K+ ++E +PA + EA ++ Q+ + IV++
Sbjct: 378 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 437
Query: 574 GFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPS 633
G C M L+ E E G L L+ + + + + +V ++ + YL + +
Sbjct: 438 GICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKN---IIELVHQVSMGMKYLE---ESN 490
Query: 634 IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSS-NRTLVVGTY--GYIAPELAYTMAV 690
VHRD A ++DFGL++ L D + + G + + APE
Sbjct: 491 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF 550
Query: 691 TEKCDVYSFGVVALEVL 707
+ K DV+SFGV+ E
Sbjct: 551 SSKSDVWSFGVLMWEAF 567
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 94/205 (45%), Gaps = 8/205 (3%)
Query: 508 EDFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHR 567
+DF +G G G V + Q L+ +KL E + PA E ++L +
Sbjct: 16 DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIK-PAIRNQIIRELQVLHECNSP 74
Query: 568 NIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLH 627
IV YG + + + E+M+ GSL VL+ + + + + +V+I ++ L+YL
Sbjct: 75 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLK-EAKRIPEEILGKVSI--AVLRGLAYLR 131
Query: 628 YDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYT 687
K I+HRD E + DFG++ L +N VGT Y+APE
Sbjct: 132 E--KHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS--FVGTRSYMAPERLQG 187
Query: 688 MAVTEKCDVYSFGVVALEVLMGSHP 712
+ + D++S G+ +E+ +G +P
Sbjct: 188 THYSVQSDIWSMGLSLVELAVGRYP 212
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 10/202 (4%)
Query: 515 CIGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLY 573
IG G + V A+ + +GK VA++ + +++ + + F+ E R++ + H NIVKL+
Sbjct: 21 TIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLF 79
Query: 574 GFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPS 633
K ++L+ EY G +F L E + + + + A+ Y H +
Sbjct: 80 EVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAK---FRQIVSAVQYCH---QKF 133
Query: 634 IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYTMAVT-E 692
IVHRD +ADFG + + T G+ Y APEL
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTF-CGSPPYAAPELFQGKKYDGP 192
Query: 693 KCDVYSFGVVALEVLMGSHPTD 714
+ DV+S GV+ ++ GS P D
Sbjct: 193 EVDVWSLGVILYTLVSGSLPFD 214
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 91/219 (41%), Gaps = 22/219 (10%)
Query: 503 MIEATEDFHIKY-------CIGTGGYGSVYRAQLSSGK----LVALKKLHRSETEEPAFL 551
M +T D+ I+ CIG G +G V++ S + VA+K ++ +
Sbjct: 3 MGSSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSD--SVR 60
Query: 552 ESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTK 611
E F EA + Q H +IVKL G N +++I E G L L+ V LD
Sbjct: 61 EKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQ--VRKYSLDLAS 117
Query: 612 RVNIVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRT 671
+ ++ AL+YL VHRD + DFGL+R + DS+
Sbjct: 118 LILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYK 173
Query: 672 LVVGT--YGYIAPELAYTMAVTEKCDVYSFGVVALEVLM 708
G ++APE T DV+ FGV E+LM
Sbjct: 174 ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILM 212
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 90/203 (44%), Gaps = 13/203 (6%)
Query: 516 IGTGGYGSVYRA--QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLY 573
+G+G +G+V + Q+ K+ ++E +PA + EA ++ Q+ + IV++
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 574 GFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPS 633
G C M L+ E E G L L+ + + + +V ++ + YL + +
Sbjct: 79 GICEAESWM-LVMEMAELGPLNKYLQQNRHVKD---KNIIELVHQVSMGMKYLE---ESN 131
Query: 634 IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSN-RTLVVGTY--GYIAPELAYTMAV 690
VHRD A ++DFGL++ L D + + G + + APE
Sbjct: 132 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINYYKF 191
Query: 691 TEKCDVYSFGVVALEVL-MGSHP 712
+ K DV+SFGV+ E G P
Sbjct: 192 SSKSDVWSFGVLMWEAFSYGQKP 214
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 89/216 (41%), Gaps = 22/216 (10%)
Query: 506 ATEDFHIKY-------CIGTGGYGSVYRAQLSS----GKLVALKKLHRSETEEPAFLESF 554
+T D+ I+ CIG G +G V++ S VA+K ++ + E F
Sbjct: 381 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSD--SVREKF 438
Query: 555 QTEARLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVN 614
EA + Q H +IVKL G N +++I E G L L+ V LD +
Sbjct: 439 LQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQ--VRKFSLDLASLIL 495
Query: 615 IVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVV 674
++ AL+YL VHRD + DFGL+R + DS+
Sbjct: 496 YAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASK 551
Query: 675 GT--YGYIAPELAYTMAVTEKCDVYSFGVVALEVLM 708
G ++APE T DV+ FGV E+LM
Sbjct: 552 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILM 587
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 89/216 (41%), Gaps = 22/216 (10%)
Query: 506 ATEDFHIKY-------CIGTGGYGSVYRAQLSS----GKLVALKKLHRSETEEPAFLESF 554
+T D+ I+ CIG G +G V++ S VA+K ++ + E F
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSD--SVREKF 58
Query: 555 QTEARLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVN 614
EA + Q H +IVKL G N +++I E G L L+ V LD +
Sbjct: 59 LQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQ--VRKYSLDLASLIL 115
Query: 615 IVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVV 674
++ AL+YL VHRD + DFGL+R + DS+
Sbjct: 116 YAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASK 171
Query: 675 GT--YGYIAPELAYTMAVTEKCDVYSFGVVALEVLM 708
G ++APE T DV+ FGV E+LM
Sbjct: 172 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILM 207
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 98/214 (45%), Gaps = 15/214 (7%)
Query: 503 MIEATEDFHIKYCIGTGGYGSVYRAQ--LSSGKLVALKKLHRSETEEPAFLESFQTEA-- 558
+ A + + IG G YG V++A+ + G+ VALK++ EE L + + A
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 559 RLLSQIRHRNIVKLYGFCLHNKC-----MFLIYEYMERGSLFCVLRNDVEAVELDWTKRV 613
R L H N+V+L+ C ++ + L++E++++ + + V + K
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIK-- 123
Query: 614 NIVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLV 673
+++ + L +LH +VHRD + +ADFGLAR+ + ++V
Sbjct: 124 DMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVV 180
Query: 674 VGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVL 707
V T Y APE+ + D++S G + E+
Sbjct: 181 V-TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 92/208 (44%), Gaps = 16/208 (7%)
Query: 506 ATEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQI 564
+ E+F IG G YG VY+A+ +G++VALKK+ R +TE + E LL ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKEL 62
Query: 565 RHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALS 624
H NIVKL ++L++E++ L+ ++A L I + L
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLSMD-----LKKFMDASALTGIPLPLIKSYLFQLLQ 117
Query: 625 YLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPEL 684
L + ++HRD +ADFGLAR V T Y APE+
Sbjct: 118 GLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 177
Query: 685 -----AYTMAVTEKCDVYSFGVVALEVL 707
Y+ AV D++S G + E++
Sbjct: 178 LLGCKYYSTAV----DIWSLGCIFAEMV 201
>pdb|2OMZ|A Chain A, Crystal Structure Of Inla Y369a/hec1 Complex
Length = 466
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 87/265 (32%), Positives = 125/265 (47%), Gaps = 26/265 (9%)
Query: 31 LSGRMPSEIGALSKLEKLV-LSH-NSLTGRIPSEIGALSRLKVLDLSYNRLTGTIPSEXX 88
LS S+I ALS L L LS N +T P + L+ L+ LD+S N+++ S
Sbjct: 140 LSSNTISDISALSGLTSLQQLSFGNQVTDLKP--LANLTTLERLDISSNKVSDI--SVLA 195
Query: 89 XXXXXXXXXXXXXXXXXXXPLEFGNLKDLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLSL 148
PL G L +LD+L L GN+L + ++ +LTNLT LDL+
Sbjct: 196 KLTNLESLIATNNQISDITPL--GILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLAN 251
Query: 149 NQLSGRLPQEVGNLKNLKSLFLDNNHLSGPIPSTLYHLNQLATLCLGYNKL--VGPVTKE 206
NQ+S P + L L L L N +S P L L L L L N+L + P++
Sbjct: 252 NQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISPIS-- 305
Query: 207 VGNMKNLDRLHLNGNNLTGSIPSTIGYLNLLDELHLSHNRLDGPIPPTIGNLTNLIALDL 266
N+KNL L L NN++ P + L L L ++N++ ++ NLTN+ L
Sbjct: 306 --NLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFANNKVSDV--SSLANLTNINWLSA 359
Query: 267 SSNQLSGLLPREVGNLKYLASLSLN 291
NQ+S L P + NL + L LN
Sbjct: 360 GHNQISDLTP--LANLTRITQLGLN 382
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 95/201 (47%), Gaps = 33/201 (16%)
Query: 113 NLKDLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNLKSLFLDN 172
NL L + + N++ + P + NLTNLT L L NQ++ P + NL NL L L +
Sbjct: 87 NLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSS 142
Query: 173 NHLSGPIPSTLYHLNQLATLCLGYNKLVGPVTKEVGNMKNLDRLHLNGN----------- 221
N +S S L L L L G N++ K + N+ L+RL ++ N
Sbjct: 143 NTISDI--SALSGLTSLQQLSFG-NQVTD--LKPLANLTTLERLDISSNKVSDISVLAKL 197
Query: 222 -NLTGSIPST--------IGYLNLLDELHLSHNRLDGPIPPTIGNLTNLIALDLSSNQLS 272
NL I + +G L LDEL L+ N+L T+ +LTNL LDL++NQ+S
Sbjct: 198 TNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQIS 255
Query: 273 GLLPREVGNLKYLASLSLNGN 293
L P + L L L L N
Sbjct: 256 NLAP--LSGLTKLTELKLGAN 274
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 95/202 (47%), Gaps = 34/202 (16%)
Query: 116 DLDQLR-LQGNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNLKSLFLDNNH 174
DLDQ+ LQ ++L + L NLT ++ S NQL+ P + NL L + ++NN
Sbjct: 43 DLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQ 100
Query: 175 LSGPIPSTLYHLNQLATLCLGYNKLVGPVTKEVGNMKNLDRLHLN--------------- 219
++ P L +L L L L N++ + N+ NL+RL L+
Sbjct: 101 IADITP--LANLTNLTGLTLFNNQITD--IDPLKNLTNLNRLELSSNTISDISALSGLTS 156
Query: 220 ------GNNLTGSIPSTIGYLNLLDELHLSHNRLDGPIPPTIGNLTNLIALDLSSNQLSG 273
GN +T P + L L+ L +S N++ + LTNL +L ++NQ+S
Sbjct: 157 LQQLSFGNQVTDLKP--LANLTTLERLDISSNKVSD--ISVLAKLTNLESLIATNNQISD 212
Query: 274 LLPREVGNLKYLASLSLNGNIL 295
+ P +G L L LSLNGN L
Sbjct: 213 ITP--LGILTNLDELSLNGNQL 232
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 94/207 (45%), Gaps = 16/207 (7%)
Query: 510 FHIKYCIGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRN 568
F ++ +G G VYR Q + K ALK L ++ ++ +TE +L ++ H N
Sbjct: 55 FEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKK-----IVRTEIGVLLRLSHPN 109
Query: 569 IVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHY 628
I+KL + L+ E + G LF + E D + VK + A++YLH
Sbjct: 110 IIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERD---AADAVKQILEAVAYLHE 166
Query: 629 DCKPSIVHRDXXXXXXXXXXXXEAF---VADFGLARLLHPDSSNRTLVVGTYGYIAPELA 685
+ IVHRD +ADFGL++++ +T V GT GY APE+
Sbjct: 167 N---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKT-VCGTPGYCAPEIL 222
Query: 686 YTMAVTEKCDVYSFGVVALEVLMGSHP 712
A + D++S G++ +L G P
Sbjct: 223 RGCAYGPEVDMWSVGIITYILLCGFEP 249
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 90/216 (41%), Gaps = 22/216 (10%)
Query: 506 ATEDFHIKY-------CIGTGGYGSVYRAQLSSGK----LVALKKLHRSETEEPAFLESF 554
+T D+ I+ CIG G +G V++ S + VA+K ++ + E F
Sbjct: 4 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSD--SVREKF 61
Query: 555 QTEARLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVN 614
EA + Q H +IVKL G N +++I E G L L+ V LD +
Sbjct: 62 LQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQ--VRKYSLDLASLIL 118
Query: 615 IVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVV 674
++ AL+YL VHRD + DFGL+R + DS+
Sbjct: 119 YAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASK 174
Query: 675 GT--YGYIAPELAYTMAVTEKCDVYSFGVVALEVLM 708
G ++APE T DV+ FGV E+LM
Sbjct: 175 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILM 210
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 90/203 (44%), Gaps = 13/203 (6%)
Query: 516 IGTGGYGSVYRA--QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLY 573
+G+G +G+V + Q+ K+ ++E +PA + EA ++ Q+ + IV++
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 574 GFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPS 633
G C M L+ E E G L L+ + + + +V ++ + YL + +
Sbjct: 79 GICEAESWM-LVMEMAELGPLNKYLQQNRHVKD---KNIIELVHQVSMGMKYLE---ESN 131
Query: 634 IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSS-NRTLVVGTY--GYIAPELAYTMAV 690
VHRD A ++DFGL++ L D + + G + + APE
Sbjct: 132 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF 191
Query: 691 TEKCDVYSFGVVALEVL-MGSHP 712
+ K DV+SFGV+ E G P
Sbjct: 192 SSKSDVWSFGVLMWEAFSYGQKP 214
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 90/203 (44%), Gaps = 13/203 (6%)
Query: 516 IGTGGYGSVYRA--QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLY 573
+G+G +G+V + Q+ K+ ++E +PA + EA ++ Q+ + IV++
Sbjct: 13 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 72
Query: 574 GFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPS 633
G C M L+ E E G L L+ + + + +V ++ + YL + +
Sbjct: 73 GICEAESWM-LVMEMAELGPLNKYLQQNRHVKD---KNIIELVHQVSMGMKYLE---ESN 125
Query: 634 IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSS-NRTLVVGTY--GYIAPELAYTMAV 690
VHRD A ++DFGL++ L D + + G + + APE
Sbjct: 126 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF 185
Query: 691 TEKCDVYSFGVVALEVL-MGSHP 712
+ K DV+SFGV+ E G P
Sbjct: 186 SSKSDVWSFGVLMWEAFSYGQKP 208
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 92/208 (44%), Gaps = 16/208 (7%)
Query: 506 ATEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQI 564
+ E+F IG G YG VY+A+ +G++VALKK+ R +TE + E LL ++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKEL 60
Query: 565 RHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALS 624
H NIVKL ++L++E++ L+ ++A L I + L
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLSMD-----LKKFMDASALTGIPLPLIKSYLFQLLQ 115
Query: 625 YLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPEL 684
L + ++HRD +ADFGLAR V T Y APE+
Sbjct: 116 GLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 175
Query: 685 -----AYTMAVTEKCDVYSFGVVALEVL 707
Y+ AV D++S G + E++
Sbjct: 176 LLGCKYYSTAV----DIWSLGCIFAEMV 199
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 88/209 (42%), Gaps = 24/209 (11%)
Query: 516 IGTGGYGSVYRAQLS------SGKLVALKKLHR--SETEEPAFLESFQTEARLLSQIRHR 567
+G G +G VY Q+S S VA+K L SE +E FL EA ++S+ H+
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFL----MEALIISKFNHQ 134
Query: 568 NIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRND----VEAVELDWTKRVNIVKSMAHAL 623
NIV+ G L + F++ E M G L LR + L +++ + +A
Sbjct: 135 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 194
Query: 624 SYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVA---DFGLARLLHPDSSNRT--LVVGTYG 678
YL + +HRD VA DFG+AR ++ R +
Sbjct: 195 QYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVK 251
Query: 679 YIAPELAYTMAVTEKCDVYSFGVVALEVL 707
++ PE T K D +SFGV+ E+
Sbjct: 252 WMPPEAFMEGIFTSKTDTWSFGVLLWEIF 280
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 90/216 (41%), Gaps = 22/216 (10%)
Query: 506 ATEDFHIKY-------CIGTGGYGSVYRAQLSSGK----LVALKKLHRSETEEPAFLESF 554
+T D+ I+ CIG G +G V++ S + VA+K ++ + E F
Sbjct: 3 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSD--SVREKF 60
Query: 555 QTEARLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVN 614
EA + Q H +IVKL G N +++I E G L L+ V LD +
Sbjct: 61 LQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQ--VRKYSLDLASLIL 117
Query: 615 IVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVV 674
++ AL+YL VHRD + DFGL+R + DS+
Sbjct: 118 YAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASK 173
Query: 675 GT--YGYIAPELAYTMAVTEKCDVYSFGVVALEVLM 708
G ++APE T DV+ FGV E+LM
Sbjct: 174 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILM 209
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 90/216 (41%), Gaps = 22/216 (10%)
Query: 506 ATEDFHIKY-------CIGTGGYGSVYRAQLSSGK----LVALKKLHRSETEEPAFLESF 554
+T D+ I+ CIG G +G V++ S + VA+K ++ + E F
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSD--SVREKF 58
Query: 555 QTEARLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVN 614
EA + Q H +IVKL G N +++I E G L L+ V LD +
Sbjct: 59 LQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQ--VRKYSLDLASLIL 115
Query: 615 IVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVV 674
++ AL+YL VHRD + DFGL+R + DS+
Sbjct: 116 YAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASK 171
Query: 675 GT--YGYIAPELAYTMAVTEKCDVYSFGVVALEVLM 708
G ++APE T DV+ FGV E+LM
Sbjct: 172 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILM 207
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 88/207 (42%), Gaps = 8/207 (3%)
Query: 508 EDFHIKYCIGTGGYGSVYRAQL-SSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIR- 565
++F +G G +G V A++ +G L A+K L + + +E TE R+LS R
Sbjct: 23 DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARN 82
Query: 566 HRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSY 625
H + +L+ +F + E++ G L ++ ++ D + + AL +
Sbjct: 83 HPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQ---KSRRFDEARARFYAAEIISALMF 139
Query: 626 LHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELA 685
LH I++RD +ADFG+ + + GT YIAPE+
Sbjct: 140 LH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEIL 196
Query: 686 YTMAVTEKCDVYSFGVVALEVLMGSHP 712
M D ++ GV+ E+L G P
Sbjct: 197 QEMLYGPAVDWWAMGVLLYEMLCGHAP 223
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 90/203 (44%), Gaps = 13/203 (6%)
Query: 516 IGTGGYGSVYRA--QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLY 573
+G+G +G+V + Q+ K+ ++E +PA + EA ++ Q+ + IV++
Sbjct: 33 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 92
Query: 574 GFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPS 633
G C M L+ E E G L L+ + + + +V ++ + YL + +
Sbjct: 93 GICEAESWM-LVMEMAELGPLNKYLQQNRHVKD---KNIIELVHQVSMGMKYLE---ESN 145
Query: 634 IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSS-NRTLVVGTY--GYIAPELAYTMAV 690
VHRD A ++DFGL++ L D + + G + + APE
Sbjct: 146 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF 205
Query: 691 TEKCDVYSFGVVALEVL-MGSHP 712
+ K DV+SFGV+ E G P
Sbjct: 206 SSKSDVWSFGVLMWEAFSYGQKP 228
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 89/209 (42%), Gaps = 24/209 (11%)
Query: 516 IGTGGYGSVYRAQLS------SGKLVALKKLHR--SETEEPAFLESFQTEARLLSQIRHR 567
+G G +G VY Q+S S VA+K L SE +E FL EA ++S+ H+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFL----MEALIISKFNHQ 94
Query: 568 NIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRND----VEAVELDWTKRVNIVKSMAHAL 623
NIV+ G L + F++ E M G L LR + L +++ + +A
Sbjct: 95 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 154
Query: 624 SYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVA---DFGLARLLHPDSSNRT--LVVGTYG 678
YL + +HRD VA DFG+A+ ++ S R +
Sbjct: 155 QYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVK 211
Query: 679 YIAPELAYTMAVTEKCDVYSFGVVALEVL 707
++ PE T K D +SFGV+ E+
Sbjct: 212 WMPPEAFMEGIFTSKTDTWSFGVLLWEIF 240
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 86/207 (41%), Gaps = 15/207 (7%)
Query: 508 EDFHIKYCIGTGGYGSVYRAQLSSGK----LVALKKLHRSETEEPAFLESFQTEARLLSQ 563
E + CIG G +G V++ S + VA+K ++ + E F EA + Q
Sbjct: 7 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSD--SVREKFLQEALTMRQ 64
Query: 564 IRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHAL 623
H +IVKL G N +++I E G L L+ V LD + ++ AL
Sbjct: 65 FDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQ--VRKYSLDLASLILYAYQLSTAL 121
Query: 624 SYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGT--YGYIA 681
+YL VHRD + DFGL+R + DS+ G ++A
Sbjct: 122 AYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMA 177
Query: 682 PELAYTMAVTEKCDVYSFGVVALEVLM 708
PE T DV+ FGV E+LM
Sbjct: 178 PESINFRRFTSASDVWMFGVCMWEILM 204
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 87/197 (44%), Gaps = 6/197 (3%)
Query: 516 IGTGGYG-SVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
IG G +G ++ G+ +K+++ S ES + E +L+ ++H NIV+
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREES-RREVAVLANMKHPNIVQYRE 90
Query: 575 FCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSI 634
N ++++ +Y E G LF + N + V + ++ + AL ++H I
Sbjct: 91 SFEENGSLYIVMDYCEGGDLFKRI-NAQKGVLFQEDQILDWFVQICLALKHVH---DRKI 146
Query: 635 VHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYTMAVTEKC 694
+HRD + DFG+AR+L+ +GT Y++PE+ K
Sbjct: 147 LHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKPYNNKS 206
Query: 695 DVYSFGVVALEVLMGSH 711
D+++ G V E+ H
Sbjct: 207 DIWALGCVLYELCTLKH 223
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 90/203 (44%), Gaps = 13/203 (6%)
Query: 516 IGTGGYGSVYRA--QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLY 573
+G+G +G+V + Q+ K+ ++E +PA + EA ++ Q+ + IV++
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 574 GFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPS 633
G C M L+ E E G L L+ + + + +V ++ + YL + +
Sbjct: 95 GICEAESWM-LVMEMAELGPLNKYLQQNRHVKD---KNIIELVHQVSMGMKYLE---ESN 147
Query: 634 IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSS-NRTLVVGTY--GYIAPELAYTMAV 690
VHRD A ++DFGL++ L D + + G + + APE
Sbjct: 148 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF 207
Query: 691 TEKCDVYSFGVVALEVL-MGSHP 712
+ K DV+SFGV+ E G P
Sbjct: 208 SSKSDVWSFGVLMWEAFSYGQKP 230
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 90/203 (44%), Gaps = 13/203 (6%)
Query: 516 IGTGGYGSVYRA--QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLY 573
+G+G +G+V + Q+ K+ ++E +PA + EA ++ Q+ + IV++
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 574 GFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPS 633
G C M L+ E E G L L+ + + + +V ++ + YL + +
Sbjct: 95 GICEAESWM-LVMEMAELGPLNKYLQQNRHVKD---KNIIELVHQVSMGMKYLE---ESN 147
Query: 634 IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSS-NRTLVVGTY--GYIAPELAYTMAV 690
VHRD A ++DFGL++ L D + + G + + APE
Sbjct: 148 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF 207
Query: 691 TEKCDVYSFGVVALEVL-MGSHP 712
+ K DV+SFGV+ E G P
Sbjct: 208 SSKSDVWSFGVLMWEAFSYGQKP 230
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 88/209 (42%), Gaps = 24/209 (11%)
Query: 516 IGTGGYGSVYRAQLS------SGKLVALKKLHR--SETEEPAFLESFQTEARLLSQIRHR 567
+G G +G VY Q+S S VA+K L SE +E FL EA ++S+ H+
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFL----MEALIISKFNHQ 111
Query: 568 NIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRND----VEAVELDWTKRVNIVKSMAHAL 623
NIV+ G L + F++ E M G L LR + L +++ + +A
Sbjct: 112 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 171
Query: 624 SYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVA---DFGLARLLHPDSSNRT--LVVGTYG 678
YL + +HRD VA DFG+AR ++ R +
Sbjct: 172 QYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVK 228
Query: 679 YIAPELAYTMAVTEKCDVYSFGVVALEVL 707
++ PE T K D +SFGV+ E+
Sbjct: 229 WMPPEAFMEGIFTSKTDTWSFGVLLWEIF 257
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 90/203 (44%), Gaps = 13/203 (6%)
Query: 516 IGTGGYGSVYRA--QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLY 573
+G+G +G+V + Q+ K+ ++E +PA + EA ++ Q+ + IV++
Sbjct: 25 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 84
Query: 574 GFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPS 633
G C M L+ E E G L L+ + + + +V ++ + YL + +
Sbjct: 85 GICEAESWM-LVMEMAELGPLNKYLQQNRHVKD---KNIIELVHQVSMGMKYLE---ESN 137
Query: 634 IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSS-NRTLVVGTY--GYIAPELAYTMAV 690
VHRD A ++DFGL++ L D + + G + + APE
Sbjct: 138 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF 197
Query: 691 TEKCDVYSFGVVALEVL-MGSHP 712
+ K DV+SFGV+ E G P
Sbjct: 198 SSKSDVWSFGVLMWEAFSYGQKP 220
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 90/203 (44%), Gaps = 13/203 (6%)
Query: 516 IGTGGYGSVYRA--QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLY 573
+G+G +G+V + Q+ K+ ++E +PA + EA ++ Q+ + IV++
Sbjct: 15 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 74
Query: 574 GFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPS 633
G C M L+ E E G L L+ + + + +V ++ + YL + +
Sbjct: 75 GICEAESWM-LVMEMAELGPLNKYLQQNRHVKD---KNIIELVHQVSMGMKYLE---ESN 127
Query: 634 IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSS-NRTLVVGTY--GYIAPELAYTMAV 690
VHRD A ++DFGL++ L D + + G + + APE
Sbjct: 128 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF 187
Query: 691 TEKCDVYSFGVVALEVL-MGSHP 712
+ K DV+SFGV+ E G P
Sbjct: 188 SSKSDVWSFGVLMWEAFSYGQKP 210
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 97/210 (46%), Gaps = 13/210 (6%)
Query: 507 TEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIR 565
E ++I +G G +G V + + + + A+K ++++ + + E LL ++
Sbjct: 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKD-TSTILREVELLKKLD 79
Query: 566 HRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSY 625
H NI+KL+ + +++ E G LF + E D + I+K + ++Y
Sbjct: 80 HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAAR---IIKQVFSGITY 136
Query: 626 LHYDCKPSIVHRDXX---XXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAP 682
+H K +IVHRD + + DFGL+ ++ + +GT YIAP
Sbjct: 137 MH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDR-IGTAYYIAP 192
Query: 683 ELAYTMAVTEKCDVYSFGVVALEVLMGSHP 712
E+ EKCDV+S GV+ +L G+ P
Sbjct: 193 EVL-RGTYDEKCDVWSAGVILYILLSGTPP 221
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 97/210 (46%), Gaps = 13/210 (6%)
Query: 507 TEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIR 565
E ++I +G G +G V + + + + A+K ++++ + + E LL ++
Sbjct: 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKD-TSTILREVELLKKLD 79
Query: 566 HRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSY 625
H NI+KL+ + +++ E G LF + E D + I+K + ++Y
Sbjct: 80 HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAAR---IIKQVFSGITY 136
Query: 626 LHYDCKPSIVHRDXX---XXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAP 682
+H K +IVHRD + + DFGL+ ++ + +GT YIAP
Sbjct: 137 MH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDR-IGTAYYIAP 192
Query: 683 ELAYTMAVTEKCDVYSFGVVALEVLMGSHP 712
E+ EKCDV+S GV+ +L G+ P
Sbjct: 193 EVL-RGTYDEKCDVWSAGVILYILLSGTPP 221
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 92/220 (41%), Gaps = 31/220 (14%)
Query: 506 ATEDFHIKYCIGTGGYGSVYRAQ-LSSGKLVALKK------------LHRSETEEPAFLE 552
AT + IG G YG+VY+A+ SG VALK L S E A L
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALL- 65
Query: 553 SFQTEARLLSQIRHRNIVKLYGFCLHNKC-----MFLIYEYMERGSLFCVLRNDVEAVEL 607
R L H N+V+L C ++ + L++E++++ + + +
Sbjct: 66 ------RRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPA 119
Query: 608 DWTKRVNIVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDS 667
+ K ++++ L +LH +C IVHRD +ADFGLAR ++
Sbjct: 120 ETIK--DLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLAR-IYSYQ 173
Query: 668 SNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVL 707
T VV T Y APE+ D++S G + E+
Sbjct: 174 MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 213
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 88/202 (43%), Gaps = 10/202 (4%)
Query: 515 CIGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLY 573
IG G + V A+ + +GK VA+K + +++ + + F+ E R++ + H NIVKL+
Sbjct: 21 TIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLF 79
Query: 574 GFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPS 633
K ++L+ EY G +F L E + + + + A+ Y H +
Sbjct: 80 EVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAK---FRQIVSAVQYCH---QKF 133
Query: 634 IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYTMAVT-E 692
IVHRD +ADFG + + G Y APEL
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEF-TFGNKLDAFCGAPPYAAPELFQGKKYDGP 192
Query: 693 KCDVYSFGVVALEVLMGSHPTD 714
+ DV+S GV+ ++ GS P D
Sbjct: 193 EVDVWSLGVILYTLVSGSLPFD 214
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 97/240 (40%), Gaps = 5/240 (2%)
Query: 509 DFHIKYCIGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHR 567
+F I+ IG G + VYRA L G VALKK+ + + E LL Q+ H
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 568 NIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRV-NIVKSMAHALSYL 626
N++K Y + + + ++ E + G L ++++ + L + V + AL ++
Sbjct: 93 NVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHM 152
Query: 627 HYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAY 686
H ++HRD + D GL R ++ +VGT Y++PE +
Sbjct: 153 H---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIH 209
Query: 687 TMAVTEKCDVYSFGVVALEVLMGSHPTDXXXXXXXXXGRKISQNPRLDLQCNAYLKNFSQ 746
K D++S G + E+ P +KI Q L + Y + Q
Sbjct: 210 ENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQ 269
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 93/217 (42%), Gaps = 31/217 (14%)
Query: 509 DFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHR 567
DF IG+GG+G V++A+ GK +K++ + E + E + L+++ H
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN-------EKAEREVKALAKLDHV 64
Query: 568 NIVKLYGFCL-----------------HNKCMFLIYEYMERGSLFCVLRNDVEAVELDWT 610
NIV Y C KC+F+ E+ ++G+L + +LD
Sbjct: 65 NIVH-YNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEK-RRGEKLDKV 122
Query: 611 KRVNIVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNR 670
+ + + + + Y+H +++RD + + DFGL L D R
Sbjct: 123 LALELFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDG-KR 178
Query: 671 TLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVL 707
GT Y++PE + ++ D+Y+ G++ E+L
Sbjct: 179 XRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 86/214 (40%), Gaps = 16/214 (7%)
Query: 508 EDFHIKYCIGTGGYGSVYRAQLS--SGKLV--ALKKLHRSETEEPAFLESFQTEARLLSQ 563
+D + +G G +G V R + SGK V A+K L +P ++ F E +
Sbjct: 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67
Query: 564 IRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHAL 623
+ HRN+++LYG L M ++ E GSL LR L R + +A +
Sbjct: 68 LDHRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGM 124
Query: 624 SYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVG----TYGY 679
YL +HRD + DFGL R L P + + ++ + +
Sbjct: 125 GYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRAL-PQNDDHXVMQEHRKVPFAW 180
Query: 680 IAPELAYTMAVTEKCDVYSFGVVALEVLM-GSHP 712
APE T + D + FGV E+ G P
Sbjct: 181 CAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 86/214 (40%), Gaps = 16/214 (7%)
Query: 508 EDFHIKYCIGTGGYGSVYRAQLS--SGKLV--ALKKLHRSETEEPAFLESFQTEARLLSQ 563
+D + +G G +G V R + SGK V A+K L +P ++ F E +
Sbjct: 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 77
Query: 564 IRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHAL 623
+ HRN+++LYG L M ++ E GSL LR L R + +A +
Sbjct: 78 LDHRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGM 134
Query: 624 SYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVG----TYGY 679
YL +HRD + DFGL R L P + + ++ + +
Sbjct: 135 GYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRAL-PQNDDHXVMQEHRKVPFAW 190
Query: 680 IAPELAYTMAVTEKCDVYSFGVVALEVLM-GSHP 712
APE T + D + FGV E+ G P
Sbjct: 191 CAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 224
>pdb|1O6S|A Chain A, Internalin (Listeria Monocytogenes) E-Cadherin (Human)
Recognition Complex
pdb|1O6T|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|B Chain B, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
Length = 466
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 87/265 (32%), Positives = 124/265 (46%), Gaps = 26/265 (9%)
Query: 31 LSGRMPSEIGALSKLEKLV-LSH-NSLTGRIPSEIGALSRLKVLDLSYNRLTGTIPSEXX 88
LS S+I ALS L L LS N +T P + L+ L+ LD+S N+++ S
Sbjct: 141 LSSNTISDISALSGLTSLQQLSFGNQVTDLKP--LANLTTLERLDISSNKVSDI--SVLA 196
Query: 89 XXXXXXXXXXXXXXXXXXXPLEFGNLKDLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLSL 148
PL G L +LD+L L GN+L + ++ +LTNLT LDL+
Sbjct: 197 KLTNLESLIATNNQISDITPL--GILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLAN 252
Query: 149 NQLSGRLPQEVGNLKNLKSLFLDNNHLSGPIPSTLYHLNQLATLCLGYNKL--VGPVTKE 206
NQ+S P + L L L L N +S P L L L L L N+L + P++
Sbjct: 253 NQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISPIS-- 306
Query: 207 VGNMKNLDRLHLNGNNLTGSIPSTIGYLNLLDELHLSHNRLDGPIPPTIGNLTNLIALDL 266
N+KNL L L NN++ P + L L L +N++ ++ NLTN+ L
Sbjct: 307 --NLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSA 360
Query: 267 SSNQLSGLLPREVGNLKYLASLSLN 291
NQ+S L P + NL + L LN
Sbjct: 361 GHNQISDLTP--LANLTRITQLGLN 383
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 95/201 (47%), Gaps = 33/201 (16%)
Query: 113 NLKDLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNLKSLFLDN 172
NL L + + N++ + P + NLTNLT L L NQ++ P + NL NL L L +
Sbjct: 88 NLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSS 143
Query: 173 NHLSGPIPSTLYHLNQLATLCLGYNKLVGPVTKEVGNMKNLDRLHLNGN----------- 221
N +S S L L L L G N++ K + N+ L+RL ++ N
Sbjct: 144 NTISDI--SALSGLTSLQQLSFG-NQVTD--LKPLANLTTLERLDISSNKVSDISVLAKL 198
Query: 222 -NLTGSIPST--------IGYLNLLDELHLSHNRLDGPIPPTIGNLTNLIALDLSSNQLS 272
NL I + +G L LDEL L+ N+L T+ +LTNL LDL++NQ+S
Sbjct: 199 TNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQIS 256
Query: 273 GLLPREVGNLKYLASLSLNGN 293
L P + L L L L N
Sbjct: 257 NLAP--LSGLTKLTELKLGAN 275
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 95/202 (47%), Gaps = 34/202 (16%)
Query: 116 DLDQLR-LQGNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNLKSLFLDNNH 174
DLDQ+ LQ ++L + L NLT ++ S NQL+ P + NL L + ++NN
Sbjct: 44 DLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQ 101
Query: 175 LSGPIPSTLYHLNQLATLCLGYNKLVGPVTKEVGNMKNLDRLHLN--------------- 219
++ P L +L L L L N++ + N+ NL+RL L+
Sbjct: 102 IADITP--LANLTNLTGLTLFNNQITD--IDPLKNLTNLNRLELSSNTISDISALSGLTS 157
Query: 220 ------GNNLTGSIPSTIGYLNLLDELHLSHNRLDGPIPPTIGNLTNLIALDLSSNQLSG 273
GN +T P + L L+ L +S N++ + LTNL +L ++NQ+S
Sbjct: 158 LQQLSFGNQVTDLKP--LANLTTLERLDISSNKVSD--ISVLAKLTNLESLIATNNQISD 213
Query: 274 LLPREVGNLKYLASLSLNGNIL 295
+ P +G L L LSLNGN L
Sbjct: 214 ITP--LGILTNLDELSLNGNQL 233
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 90/200 (45%), Gaps = 11/200 (5%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
+G G YG VY+A + + VA+K++ R E EE + E LL +++HRNI++L
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRI-RLEHEEEGVPGTAIREVSLLKELQHRNIIELKS 100
Query: 575 FCLHNKCMFLIYEYMERGSLFCVLRN---DVEAVELDWTKRVNIVKSMAHALSYLHYDCK 631
HN + LI+EY E + +N + ++ + +N V + H+ LH D K
Sbjct: 101 VIHHNHRLHLIFEYAENDLKKYMDKNPDVSMRVIKSFLYQLINGV-NFCHSRRCLHRDLK 159
Query: 632 PSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPE-LAYTMAV 690
P ++ + DFGLAR T + T Y PE L +
Sbjct: 160 P----QNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEILLGSRHY 215
Query: 691 TEKCDVYSFGVVALEVLMGS 710
+ D++S + E+LM +
Sbjct: 216 STSVDIWSIACIWAEMLMKT 235
>pdb|2OMY|A Chain A, Crystal Structure Of Inla S192n/hec1 Complex
Length = 461
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 85/265 (32%), Positives = 123/265 (46%), Gaps = 26/265 (9%)
Query: 31 LSGRMPSEIGALSKLEKLVLSH--NSLTGRIPSEIGALSRLKVLDLSYNRLTGTIPSEXX 88
LS S+I ALS L L + N +T P + L+ L+ LD+S N+++ S
Sbjct: 136 LSSNTISDISALSGLTSLQQLNFGNQVTDLKP--LANLTTLERLDISSNKVSDI--SVLA 191
Query: 89 XXXXXXXXXXXXXXXXXXXPLEFGNLKDLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLSL 148
PL G L +LD+L L GN+L + ++ +LTNLT LDL+
Sbjct: 192 KLTNLESLIATNNQISDITPL--GILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLAN 247
Query: 149 NQLSGRLPQEVGNLKNLKSLFLDNNHLSGPIPSTLYHLNQLATLCLGYNKL--VGPVTKE 206
NQ+S P + L L L L N +S P L L L L L N+L + P++
Sbjct: 248 NQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISPIS-- 301
Query: 207 VGNMKNLDRLHLNGNNLTGSIPSTIGYLNLLDELHLSHNRLDGPIPPTIGNLTNLIALDL 266
N+KNL L L NN++ P + L L L +N++ ++ NLTN+ L
Sbjct: 302 --NLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSA 355
Query: 267 SSNQLSGLLPREVGNLKYLASLSLN 291
NQ+S L P + NL + L LN
Sbjct: 356 GHNQISDLTP--LANLTRITQLGLN 378
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 95/201 (47%), Gaps = 33/201 (16%)
Query: 113 NLKDLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNLKSLFLDN 172
NL L + + N++ + P + NLTNLT L L NQ++ P + NL NL L L +
Sbjct: 83 NLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSS 138
Query: 173 NHLSGPIPSTLYHLNQLATLCLGYNKLVGPVTKEVGNMKNLDRLHLNGN----------- 221
N +S S L L L L G N++ K + N+ L+RL ++ N
Sbjct: 139 NTISDI--SALSGLTSLQQLNFG-NQVTD--LKPLANLTTLERLDISSNKVSDISVLAKL 193
Query: 222 -NLTGSIPST--------IGYLNLLDELHLSHNRLDGPIPPTIGNLTNLIALDLSSNQLS 272
NL I + +G L LDEL L+ N+L T+ +LTNL LDL++NQ+S
Sbjct: 194 TNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQIS 251
Query: 273 GLLPREVGNLKYLASLSLNGN 293
L P + L L L L N
Sbjct: 252 NLAP--LSGLTKLTELKLGAN 270
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 95/202 (47%), Gaps = 34/202 (16%)
Query: 116 DLDQLR-LQGNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNLKSLFLDNNH 174
DLDQ+ LQ ++L + L NLT ++ S NQL+ P + NL L + ++NN
Sbjct: 39 DLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQ 96
Query: 175 LSGPIPSTLYHLNQLATLCLGYNKLVGPVTKEVGNMKNLDRLHLN--------------- 219
++ P L +L L L L N++ + N+ NL+RL L+
Sbjct: 97 IADITP--LANLTNLTGLTLFNNQITD--IDPLKNLTNLNRLELSSNTISDISALSGLTS 152
Query: 220 ------GNNLTGSIPSTIGYLNLLDELHLSHNRLDGPIPPTIGNLTNLIALDLSSNQLSG 273
GN +T P + L L+ L +S N++ + LTNL +L ++NQ+S
Sbjct: 153 LQQLNFGNQVTDLKP--LANLTTLERLDISSNKVSD--ISVLAKLTNLESLIATNNQISD 208
Query: 274 LLPREVGNLKYLASLSLNGNIL 295
+ P +G L L LSLNGN L
Sbjct: 209 ITP--LGILTNLDELSLNGNQL 228
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 65/150 (43%), Gaps = 9/150 (6%)
Query: 566 HRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSY 625
H NIVKL+ FL+ E + G LF ++ E T+ I++ + A+S+
Sbjct: 65 HPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSE---TEASYIMRKLVSAVSH 121
Query: 626 LHYDCKPSIVHRDXXXXX---XXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAP 682
+H +VHRD E + DFG ARL PD+ T Y AP
Sbjct: 122 MH---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAP 178
Query: 683 ELAYTMAVTEKCDVYSFGVVALEVLMGSHP 712
EL E CD++S GV+ +L G P
Sbjct: 179 ELLNQNGYDESCDLWSLGVILYTMLSGQVP 208
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 86/214 (40%), Gaps = 16/214 (7%)
Query: 508 EDFHIKYCIGTGGYGSVYRAQLS--SGKLV--ALKKLHRSETEEPAFLESFQTEARLLSQ 563
+D + +G G +G V R + SGK V A+K L +P ++ F E +
Sbjct: 12 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 71
Query: 564 IRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHAL 623
+ HRN+++LYG L M ++ E GSL LR L R + +A +
Sbjct: 72 LDHRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGM 128
Query: 624 SYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVG----TYGY 679
YL +HRD + DFGL R L P + + ++ + +
Sbjct: 129 GYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRAL-PQNDDHYVMQEHRKVPFAW 184
Query: 680 IAPELAYTMAVTEKCDVYSFGVVALEVLM-GSHP 712
APE T + D + FGV E+ G P
Sbjct: 185 CAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 218
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 85/207 (41%), Gaps = 11/207 (5%)
Query: 509 DFHIKYCIGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHR 567
DF +G G +G V + ++G+ A+K L + + TE+R+L RH
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 65
Query: 568 NIVKL-YGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKS-MAHALSY 625
+ L Y F H++ F++ EY G LF L + E +R + + AL Y
Sbjct: 66 FLTALKYAFQTHDRLCFVM-EYANGGELFFHLSRERVFTE----ERARFYGAEIVSALEY 120
Query: 626 LHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELA 685
LH +V+RD + DFGL + D + GT Y+APE+
Sbjct: 121 LH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVL 177
Query: 686 YTMAVTEKCDVYSFGVVALEVLMGSHP 712
D + GVV E++ G P
Sbjct: 178 EDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 85/207 (41%), Gaps = 11/207 (5%)
Query: 509 DFHIKYCIGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHR 567
DF +G G +G V + ++G+ A+K L + + TE+R+L RH
Sbjct: 11 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 70
Query: 568 NIVKL-YGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKS-MAHALSY 625
+ L Y F H++ F++ EY G LF L + E +R + + AL Y
Sbjct: 71 FLTALKYAFQTHDRLCFVM-EYANGGELFFHLSRERVFTE----ERARFYGAEIVSALEY 125
Query: 626 LHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELA 685
LH +V+RD + DFGL + D + GT Y+APE+
Sbjct: 126 LH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVL 182
Query: 686 YTMAVTEKCDVYSFGVVALEVLMGSHP 712
D + GVV E++ G P
Sbjct: 183 EDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 89/202 (44%), Gaps = 10/202 (4%)
Query: 515 CIGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLY 573
IG G + V A+ + +GK VA++ + +++ + + F+ E R++ + H NIVKL+
Sbjct: 21 TIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLF 79
Query: 574 GFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPS 633
K ++L+ EY G +F L E + + + + A+ Y H +
Sbjct: 80 EVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAK---FRQIVSAVQYCH---QKF 133
Query: 634 IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYTMAVT-E 692
IVHRD +ADFG + + G+ Y APEL
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEF-TFGNKLDEFCGSPPYAAPELFQGKKYDGP 192
Query: 693 KCDVYSFGVVALEVLMGSHPTD 714
+ DV+S GV+ ++ GS P D
Sbjct: 193 EVDVWSLGVILYTLVSGSLPFD 214
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 85/207 (41%), Gaps = 11/207 (5%)
Query: 509 DFHIKYCIGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHR 567
DF +G G +G V + ++G+ A+K L + + TE+R+L RH
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 65
Query: 568 NIVKL-YGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKS-MAHALSY 625
+ L Y F H++ F++ EY G LF L + E +R + + AL Y
Sbjct: 66 FLTALKYAFQTHDRLCFVM-EYANGGELFFHLSRERVFTE----ERARFYGAEIVSALEY 120
Query: 626 LHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELA 685
LH +V+RD + DFGL + D + GT Y+APE+
Sbjct: 121 LH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVL 177
Query: 686 YTMAVTEKCDVYSFGVVALEVLMGSHP 712
D + GVV E++ G P
Sbjct: 178 EDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 88/202 (43%), Gaps = 10/202 (4%)
Query: 515 CIGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLY 573
IG G + V A+ + +GK VA+K + +++ + + F+ E R+ + H NIVKL+
Sbjct: 21 TIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIXKVLNHPNIVKLF 79
Query: 574 GFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPS 633
K ++L+ EY G +F L E + + + + A+ Y H +
Sbjct: 80 EVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAK---FRQIVSAVQYCH---QKF 133
Query: 634 IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYTMAVT-E 692
IVHRD +ADFG + + G Y APEL
Sbjct: 134 IVHRDLKAENLLLDADXNIKIADFGFSNEF-TFGNKLDAFCGAPPYAAPELFQGKKYDGP 192
Query: 693 KCDVYSFGVVALEVLMGSHPTD 714
+ DV+S GV+ ++ GS P D
Sbjct: 193 EVDVWSLGVILYTLVSGSLPFD 214
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 85/207 (41%), Gaps = 11/207 (5%)
Query: 509 DFHIKYCIGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHR 567
DF +G G +G V + ++G+ A+K L + + TE+R+L RH
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 65
Query: 568 NIVKL-YGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKS-MAHALSY 625
+ L Y F H++ F++ EY G LF L + E +R + + AL Y
Sbjct: 66 FLTALKYAFQTHDRLCFVM-EYANGGELFFHLSRERVFTE----ERARFYGAEIVSALEY 120
Query: 626 LHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELA 685
LH +V+RD + DFGL + D + GT Y+APE+
Sbjct: 121 LH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVL 177
Query: 686 YTMAVTEKCDVYSFGVVALEVLMGSHP 712
D + GVV E++ G P
Sbjct: 178 EDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 86/214 (40%), Gaps = 16/214 (7%)
Query: 508 EDFHIKYCIGTGGYGSVYRAQLS--SGKLV--ALKKLHRSETEEPAFLESFQTEARLLSQ 563
+D + +G G +G V R + SGK V A+K L +P ++ F E +
Sbjct: 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67
Query: 564 IRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHAL 623
+ HRN+++LYG L M ++ E GSL LR L R + +A +
Sbjct: 68 LDHRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGM 124
Query: 624 SYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVG----TYGY 679
YL +HRD + DFGL R L P + + ++ + +
Sbjct: 125 GYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRAL-PQNDDHYVMQEHRKVPFAW 180
Query: 680 IAPELAYTMAVTEKCDVYSFGVVALEVLM-GSHP 712
APE T + D + FGV E+ G P
Sbjct: 181 CAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 85/207 (41%), Gaps = 11/207 (5%)
Query: 509 DFHIKYCIGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHR 567
DF +G G +G V + ++G+ A+K L + + TE+R+L RH
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 65
Query: 568 NIVKL-YGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKS-MAHALSY 625
+ L Y F H++ F++ EY G LF L + E +R + + AL Y
Sbjct: 66 FLTALKYAFQTHDRLCFVM-EYANGGELFFHLSRERVFTE----ERARFYGAEIVSALEY 120
Query: 626 LHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELA 685
LH +V+RD + DFGL + D + GT Y+APE+
Sbjct: 121 LH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVL 177
Query: 686 YTMAVTEKCDVYSFGVVALEVLMGSHP 712
D + GVV E++ G P
Sbjct: 178 EDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 97/210 (46%), Gaps = 12/210 (5%)
Query: 507 TEDFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRH 566
++++ +K +G G + V R + L K+ ++ + + EAR+ +++H
Sbjct: 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 87
Query: 567 RNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVEL-DWTKRVNIVKSMAHALSY 625
NIV+L+ +L+++ + G LF D+ A E + ++ + +++Y
Sbjct: 88 PNIVRLHDSIQEESFHYLVFDLVTGGELF----EDIVAREFYSEADASHCIQQILESIAY 143
Query: 626 LHYDCKPSIVHRDXXXXXXXXXXXXEAF---VADFGLARLLHPDSSNRTLVVGTYGYIAP 682
H + IVHR+ + +ADFGLA ++ DS GT GY++P
Sbjct: 144 CHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-DSEAWHGFAGTPGYLSP 199
Query: 683 ELAYTMAVTEKCDVYSFGVVALEVLMGSHP 712
E+ ++ D+++ GV+ +L+G P
Sbjct: 200 EVLKKDPYSKPVDIWACGVILYILLVGYPP 229
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 86/214 (40%), Gaps = 16/214 (7%)
Query: 508 EDFHIKYCIGTGGYGSVYRAQLS--SGKLV--ALKKLHRSETEEPAFLESFQTEARLLSQ 563
+D + +G G +G V R + SGK V A+K L +P ++ F E +
Sbjct: 12 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 71
Query: 564 IRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHAL 623
+ HRN+++LYG L M ++ E GSL LR L R + +A +
Sbjct: 72 LDHRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGM 128
Query: 624 SYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVG----TYGY 679
YL +HRD + DFGL R L P + + ++ + +
Sbjct: 129 GYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRAL-PQNDDHYVMQEHRKVPFAW 184
Query: 680 IAPELAYTMAVTEKCDVYSFGVVALEVLM-GSHP 712
APE T + D + FGV E+ G P
Sbjct: 185 CAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 218
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 86/214 (40%), Gaps = 16/214 (7%)
Query: 508 EDFHIKYCIGTGGYGSVYRAQLS--SGKLV--ALKKLHRSETEEPAFLESFQTEARLLSQ 563
+D + +G G +G V R + SGK V A+K L +P ++ F E +
Sbjct: 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 77
Query: 564 IRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHAL 623
+ HRN+++LYG L M ++ E GSL LR L R + +A +
Sbjct: 78 LDHRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGM 134
Query: 624 SYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVG----TYGY 679
YL +HRD + DFGL R L P + + ++ + +
Sbjct: 135 GYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRAL-PQNDDHYVMQEHRKVPFAW 190
Query: 680 IAPELAYTMAVTEKCDVYSFGVVALEVLM-GSHP 712
APE T + D + FGV E+ G P
Sbjct: 191 CAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 224
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 92/205 (44%), Gaps = 8/205 (3%)
Query: 508 EDFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHR 567
+DF +G G G V++ LV +KL E + PA E ++L +
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK-PAIRNQIIRELQVLHECNSP 67
Query: 568 NIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLH 627
IV YG + + + E+M+ GSL VL+ E +V+I ++ L+YL
Sbjct: 68 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE-QILGKVSI--AVIKGLTYLR 124
Query: 628 YDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYT 687
K I+HRD E + DFG++ L + +N VGT Y++PE
Sbjct: 125 E--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANE--FVGTRSYMSPERLQG 180
Query: 688 MAVTEKCDVYSFGVVALEVLMGSHP 712
+ + D++S G+ +E+ +G +P
Sbjct: 181 THYSVQSDIWSMGLSLVEMAVGRYP 205
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 85/207 (41%), Gaps = 11/207 (5%)
Query: 509 DFHIKYCIGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHR 567
DF +G G +G V + ++G+ A+K L + + TE+R+L RH
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 65
Query: 568 NIVKL-YGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKS-MAHALSY 625
+ L Y F H++ F++ EY G LF L + E +R + + AL Y
Sbjct: 66 FLTALKYAFQTHDRLCFVM-EYANGGELFFHLSRERVFTE----ERARFYGAEIVSALEY 120
Query: 626 LHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELA 685
LH +V+RD + DFGL + D + GT Y+APE+
Sbjct: 121 LH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVL 177
Query: 686 YTMAVTEKCDVYSFGVVALEVLMGSHP 712
D + GVV E++ G P
Sbjct: 178 EDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 97/200 (48%), Gaps = 11/200 (5%)
Query: 516 IGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
IG G YG+V++A+ + ++VALK++ R + ++ S E LL +++H+NIV+L+
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRV-RLDDDDEGVPSSALREICLLKELKHKNIVRLHD 68
Query: 575 FCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKS-MAHALSYLHYDCKPS 633
+K + L++E+ ++ L+ ++ D IVKS + L L + +
Sbjct: 69 VLHSDKKLTLVFEFCDQD-----LKKYFDSCNGDLDP--EIVKSFLFQLLKGLGFCHSRN 121
Query: 634 IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYTMAV-TE 692
++HRD E +ADFGLAR + V T Y P++ + + +
Sbjct: 122 VLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYST 181
Query: 693 KCDVYSFGVVALEVLMGSHP 712
D++S G + E+ + P
Sbjct: 182 SIDMWSAGCIFAELANAARP 201
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 86/197 (43%), Gaps = 10/197 (5%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
+G+G YGSV A +G VA+KKL R +++ E RLL ++H N++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 84
Query: 575 FCLHNKCMFLIYE-YMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPS 633
+ + + Y+ + L N V+ +L ++ + L Y+H
Sbjct: 85 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLIYQILRGLKYIH---SAD 141
Query: 634 IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYT-MAVTE 692
I+HRD E + DFGLAR H D T V T Y APE+ M +
Sbjct: 142 IIHRDLKPSNLAVNEDCELKILDFGLAR--HTD-DEMTGYVATRWYRAPEIMLNWMHYNQ 198
Query: 693 KCDVYSFGVVALEVLMG 709
D++S G + E+L G
Sbjct: 199 TVDIWSVGCIMAELLTG 215
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 86/214 (40%), Gaps = 16/214 (7%)
Query: 508 EDFHIKYCIGTGGYGSVYRAQLS--SGKLV--ALKKLHRSETEEPAFLESFQTEARLLSQ 563
+D + +G G +G V R + SGK V A+K L +P ++ F E +
Sbjct: 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67
Query: 564 IRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHAL 623
+ HRN+++LYG L M ++ E GSL LR L R + +A +
Sbjct: 68 LDHRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGM 124
Query: 624 SYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVG----TYGY 679
YL +HRD + DFGL R L P + + ++ + +
Sbjct: 125 GYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRAL-PQNDDHYVMQEHRKVPFAW 180
Query: 680 IAPELAYTMAVTEKCDVYSFGVVALEVLM-GSHP 712
APE T + D + FGV E+ G P
Sbjct: 181 CAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 94/230 (40%), Gaps = 44/230 (19%)
Query: 509 DFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHR 567
DF IG+GG+G V++A+ GK ++++ + E + E + L+++ H
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNN-------EKAEREVKALAKLDHV 65
Query: 568 NIVKLYGFCL------------------------------HNKCMFLIYEYMERGSLFCV 597
NIV Y C KC+F+ E+ ++G+L
Sbjct: 66 NIVH-YNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQW 124
Query: 598 LRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADF 657
+ +LD + + + + + Y+H ++HRD + + DF
Sbjct: 125 IEK-RRGEKLDKVLALELFEQITKGVDYIH---SKKLIHRDLKPSNIFLVDTKQVKIGDF 180
Query: 658 GLARLLHPDSSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVL 707
GL L D RT GT Y++PE + ++ D+Y+ G++ E+L
Sbjct: 181 GLVTSLKNDG-KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 85/207 (41%), Gaps = 11/207 (5%)
Query: 509 DFHIKYCIGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHR 567
DF +G G +G V + ++G+ A+K L + + TE+R+L RH
Sbjct: 9 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 68
Query: 568 NIVKL-YGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKS-MAHALSY 625
+ L Y F H++ F++ EY G LF L + E +R + + AL Y
Sbjct: 69 FLTALKYAFQTHDRLCFVM-EYANGGELFFHLSRERVFTE----ERARFYGAEIVSALEY 123
Query: 626 LHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELA 685
LH +V+RD + DFGL + D + GT Y+APE+
Sbjct: 124 LH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVL 180
Query: 686 YTMAVTEKCDVYSFGVVALEVLMGSHP 712
D + GVV E++ G P
Sbjct: 181 EDNDYGRAVDWWGLGVVMYEMMCGRLP 207
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 91/205 (44%), Gaps = 8/205 (3%)
Query: 508 EDFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHR 567
+DF +G G G V++ LV +KL E + PA E ++L +
Sbjct: 68 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK-PAIRNQIIRELQVLHECNSP 126
Query: 568 NIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLH 627
IV YG + + + E+M+ GSL VL+ E +V+I ++ L+YL
Sbjct: 127 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE-QILGKVSI--AVIKGLTYLR 183
Query: 628 YDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYT 687
K I+HRD E + DFG++ L +N VGT Y++PE
Sbjct: 184 E--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS--FVGTRSYMSPERLQG 239
Query: 688 MAVTEKCDVYSFGVVALEVLMGSHP 712
+ + D++S G+ +E+ +G +P
Sbjct: 240 THYSVQSDIWSMGLSLVEMAVGRYP 264
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 96/213 (45%), Gaps = 26/213 (12%)
Query: 516 IGTGGYGSVYRAQL------SSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNI 569
+G +G VY+ L + VA+K L + + E P E F+ EA L ++++H N+
Sbjct: 34 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTL-KDKAEGP-LREEFRHEAMLRARLQHPNV 91
Query: 570 VKLYGFCLHNKCMFLIYEYMERGSL--FCVLR---NDVEAVELDWTKR--------VNIV 616
V L G ++ + +I+ Y G L F V+R +DV + + D T + V++V
Sbjct: 92 VCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLV 151
Query: 617 KSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTL--VV 674
+A + YL +VH+D ++D GL R ++ + L +
Sbjct: 152 AQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSL 208
Query: 675 GTYGYIAPELAYTMAVTEKCDVYSFGVVALEVL 707
++APE + D++S+GVV EV
Sbjct: 209 LPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVF 241
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 97/213 (45%), Gaps = 19/213 (8%)
Query: 510 FHIKYCIGTGGYGSVYRAQLSSGKLV-ALKKLHRSETEEPAFLESFQTEARLLSQIRHRN 568
+ ++ IG G +G V A ++ A KK+ + E+ ++ F+ E ++ + H N
Sbjct: 11 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVED---VDRFKQEIEIMKSLDHPN 67
Query: 569 IVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHY 628
I++LY N ++L+ E G LF + + E D + I+K + A++Y H
Sbjct: 68 IIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAAR---IMKDVLSAVAYCH- 123
Query: 629 DCKPSIVHRDXXXX---XXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELA 685
K ++ HRD + DFGLA P RT VGT Y++P++
Sbjct: 124 --KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRT-KVGTPYYVSPQVL 180
Query: 686 YTMAVTEKCDVYSFGVVALEVLMG----SHPTD 714
+ E CD +S GV+ +L G S PTD
Sbjct: 181 EGLYGPE-CDEWSAGVMMYVLLCGYPPFSAPTD 212
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 97/213 (45%), Gaps = 19/213 (8%)
Query: 510 FHIKYCIGTGGYGSVYRAQLSSGKLV-ALKKLHRSETEEPAFLESFQTEARLLSQIRHRN 568
+ ++ IG G +G V A ++ A KK+ + E+ ++ F+ E ++ + H N
Sbjct: 28 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVED---VDRFKQEIEIMKSLDHPN 84
Query: 569 IVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHY 628
I++LY N ++L+ E G LF + + E D + I+K + A++Y H
Sbjct: 85 IIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAAR---IMKDVLSAVAYCH- 140
Query: 629 DCKPSIVHRDXXXX---XXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELA 685
K ++ HRD + DFGLA P RT VGT Y++P++
Sbjct: 141 --KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRT-KVGTPYYVSPQVL 197
Query: 686 YTMAVTEKCDVYSFGVVALEVLMG----SHPTD 714
+ E CD +S GV+ +L G S PTD
Sbjct: 198 EGLYGPE-CDEWSAGVMMYVLLCGYPPFSAPTD 229
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 86/197 (43%), Gaps = 10/197 (5%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
+G+G YGSV A +G VA+KKL R +++ E RLL ++H N++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 84
Query: 575 FCLHNKCMFLIYE-YMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPS 633
+ + + Y+ + L N V+ +L ++ + L Y+H
Sbjct: 85 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SAD 141
Query: 634 IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYT-MAVTE 692
I+HRD E + DFGLAR H D T V T Y APE+ M +
Sbjct: 142 IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE-MTGYVATRWYRAPEIMLNWMHYNQ 198
Query: 693 KCDVYSFGVVALEVLMG 709
D++S G + E+L G
Sbjct: 199 TVDIWSVGCIMAELLTG 215
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 87/197 (44%), Gaps = 10/197 (5%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
IG+G YGSV A +G VA+KKL R +++ E RLL ++H N++ L
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 93
Query: 575 FCLHNKCMFLIYE-YMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPS 633
+ + + Y+ + L N V+ +L ++ + L Y+H
Sbjct: 94 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SAD 150
Query: 634 IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYT-MAVTE 692
I+HRD E + DFGLAR H D T V T Y APE+ M +
Sbjct: 151 IIHRDLKPSNLAVNEDXELKILDFGLAR--HTDDE-MTGYVATRWYRAPEIMLNWMHYNQ 207
Query: 693 KCDVYSFGVVALEVLMG 709
D++S G + E+L G
Sbjct: 208 TVDIWSVGCIMAELLTG 224
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 90/207 (43%), Gaps = 10/207 (4%)
Query: 509 DFHIKYCIGTGGYGSVYRAQLSSGKLV-ALKKLHRSETEEPAFLESFQTEAR-LLSQIRH 566
DFH IG G +G V A+ + ++ A+K L + + + +E LL ++H
Sbjct: 39 DFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKH 98
Query: 567 RNIVKL-YGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSY 625
+V L + F +K F++ +Y+ G LF L+ E L+ R +A AL Y
Sbjct: 99 PFLVGLHFSFQTADKLYFVL-DYINGGELFYHLQR--ERCFLEPRARF-YAAEIASALGY 154
Query: 626 LHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELA 685
LH +IV+RD + DFGL + +S + GT Y+APE+
Sbjct: 155 LH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVL 211
Query: 686 YTMAVTEKCDVYSFGVVALEVLMGSHP 712
+ D + G V E+L G P
Sbjct: 212 HKQPYDRTVDWWCLGAVLYEMLYGLPP 238
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 86/197 (43%), Gaps = 10/197 (5%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
+G+G YGSV A +G VA+KKL R +++ E RLL ++H N++ L
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 107
Query: 575 FCLHNKCMFLIYE-YMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPS 633
+ + + Y+ + L N V+ +L ++ + L Y+H
Sbjct: 108 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SAD 164
Query: 634 IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYT-MAVTE 692
I+HRD E + DFGLAR H D T V T Y APE+ M +
Sbjct: 165 IIHRDLKPSNLAVNEDCELKILDFGLAR--HTD-DEMTGYVATRWYRAPEIMLNWMHYNQ 221
Query: 693 KCDVYSFGVVALEVLMG 709
D++S G + E+L G
Sbjct: 222 TVDIWSVGCIMAELLTG 238
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 86/197 (43%), Gaps = 10/197 (5%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
+G+G YGSV A +G VA+KKL R +++ E RLL ++H N++ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 108
Query: 575 FCLHNKCMFLIYE-YMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPS 633
+ + + Y+ + L N V+ +L ++ + L Y+H
Sbjct: 109 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SAD 165
Query: 634 IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYT-MAVTE 692
I+HRD E + DFGLAR H D T V T Y APE+ M +
Sbjct: 166 IIHRDLKPSNLAVNEDCELKILDFGLAR--HTD-DEMTGYVATRWYRAPEIMLNWMHYNQ 222
Query: 693 KCDVYSFGVVALEVLMG 709
D++S G + E+L G
Sbjct: 223 TVDIWSVGCIMAELLTG 239
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 88/203 (43%), Gaps = 18/203 (8%)
Query: 515 CIGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLY 573
IGTG +G V + + +G A+K L + + + +E E R+L + +VKL
Sbjct: 48 TIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 574 GFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELD---WTKRVNIVKSMAHALSYLHYDC 630
N ++++ EYM G +F LR E + ++ + H+L ++ D
Sbjct: 108 FSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 631 KPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTL-VVGTYGYIAPELAYTMA 689
KP + D VADFG A+ + RT + GT Y+APE+ +
Sbjct: 168 KPENLLIDQQGYIK---------VADFGFAKRV----KGRTWXLCGTPEYLAPEIILSKG 214
Query: 690 VTEKCDVYSFGVVALEVLMGSHP 712
+ D ++ GV+ E+ G P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 91/205 (44%), Gaps = 8/205 (3%)
Query: 508 EDFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHR 567
+DF +G G G V++ LV +KL E + PA E ++L +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK-PAIRNQIIRELQVLHECNSP 64
Query: 568 NIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLH 627
IV YG + + + E+M+ GSL VL+ E +V+I ++ L+YL
Sbjct: 65 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE-QILGKVSI--AVIKGLTYLR 121
Query: 628 YDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYT 687
K I+HRD E + DFG++ L +N VGT Y++PE
Sbjct: 122 E--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS--FVGTRSYMSPERLQG 177
Query: 688 MAVTEKCDVYSFGVVALEVLMGSHP 712
+ + D++S G+ +E+ +G +P
Sbjct: 178 THYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 88/203 (43%), Gaps = 18/203 (8%)
Query: 515 CIGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLY 573
IGTG +G V + + +G A+K L + + + +E E R+L + +VKL
Sbjct: 48 TIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 574 GFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELD---WTKRVNIVKSMAHALSYLHYDC 630
N ++++ EYM G +F LR E + ++ + H+L ++ D
Sbjct: 108 FSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 631 KPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTL-VVGTYGYIAPELAYTMA 689
KP + D VADFG A+ + RT + GT Y+APE+ +
Sbjct: 168 KPENLLIDQQGYIK---------VADFGFAKRV----KGRTWXLCGTPEYLAPEIILSKG 214
Query: 690 VTEKCDVYSFGVVALEVLMGSHP 712
+ D ++ GV+ E+ G P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 101/227 (44%), Gaps = 17/227 (7%)
Query: 496 GRITFEEMIEATEDFHIKYCIGTGGYGSVYRA-QLSSGKLV----ALKKLHRSETEEPAF 550
G + +++ TE IK +G+G +G+VY+ + G+ V A+K+L E P
Sbjct: 1 GAMALLRILKETEFKKIK-VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKA 57
Query: 551 LESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWT 610
+ EA +++ + + ++ +L G CL + LI + M G L +R + + +
Sbjct: 58 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL 116
Query: 611 KRVNIVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNR 670
+N +A ++YL +VHRD + DFGLA+LL +
Sbjct: 117 --LNWCVQIAEGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 171
Query: 671 TLVVGTY--GYIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHPTD 714
G ++A E T + DV+S+GV E++ GS P D
Sbjct: 172 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 218
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 91/205 (44%), Gaps = 8/205 (3%)
Query: 508 EDFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHR 567
+DF +G G G V++ LV +KL E + PA E ++L +
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK-PAIRNQIIRELQVLHECNSP 91
Query: 568 NIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLH 627
IV YG + + + E+M+ GSL VL+ E +V+I ++ L+YL
Sbjct: 92 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE-QILGKVSI--AVIKGLTYLR 148
Query: 628 YDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYT 687
K I+HRD E + DFG++ L +N VGT Y++PE
Sbjct: 149 E--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS--FVGTRSYMSPERLQG 204
Query: 688 MAVTEKCDVYSFGVVALEVLMGSHP 712
+ + D++S G+ +E+ +G +P
Sbjct: 205 THYSVQSDIWSMGLSLVEMAVGRYP 229
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 92/214 (42%), Gaps = 24/214 (11%)
Query: 508 EDFHIKYC--IGTGGYGSVYRAQLS-----SGKLVALKKLHRSETEEPAFLESFQTEARL 560
E+ H+KY +G G +GSV + +G LVA+K+L S ++ FQ E ++
Sbjct: 8 EERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQ---QRDFQREIQI 64
Query: 561 LSQIRHRNIVKLYG--FCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKS 618
L + IVK G + + + L+ EY+ G L L+ LD ++ +
Sbjct: 65 LKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQR--HRARLDASRLLLYSSQ 122
Query: 619 MAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYG 678
+ + YL VHRD +ADFGLA+LL D VV G
Sbjct: 123 ICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKD--YYVVREPG 177
Query: 679 -----YIAPELAYTMAVTEKCDVYSFGVVALEVL 707
+ APE + + DV+SFGVV E+
Sbjct: 178 QSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELF 211
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 86/197 (43%), Gaps = 10/197 (5%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
+G+G YGSV A +G VA+KKL R +++ E RLL ++H N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 90
Query: 575 FCLHNKCMFLIYE-YMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPS 633
+ + + Y+ + L N V+ +L ++ + L Y+H
Sbjct: 91 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SAD 147
Query: 634 IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYT-MAVTE 692
I+HRD E + DFGLAR H D T V T Y APE+ M +
Sbjct: 148 IIHRDLKPSNLAVNEDSELKILDFGLAR--HTD-DEMTGYVATRWYRAPEIMLNWMHYNQ 204
Query: 693 KCDVYSFGVVALEVLMG 709
D++S G + E+L G
Sbjct: 205 TVDIWSVGCIMAELLTG 221
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 86/197 (43%), Gaps = 10/197 (5%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
+G+G YGSV A +G VA+KKL R +++ E RLL ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 575 FCLHNKCMFLIYE-YMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPS 633
+ + + Y+ + L N V+ +L ++ + L Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SAD 145
Query: 634 IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYT-MAVTE 692
I+HRD E + DFGLAR H D T V T Y APE+ M +
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE-MTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 693 KCDVYSFGVVALEVLMG 709
D++S G + E+L G
Sbjct: 203 TVDIWSVGCIMAELLTG 219
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 90/212 (42%), Gaps = 32/212 (15%)
Query: 516 IGTGGYGSVYRAQLSSGKLVAL-------KKLHRSETEEPAFLESFQTEARLLSQIRHRN 568
IG G + +VY+ L + V + +KL +SE + F+ EA L ++H N
Sbjct: 34 IGRGSFKTVYKG-LDTETTVEVAWCELQDRKLTKSERQ------RFKEEAEXLKGLQHPN 86
Query: 569 IVKLY----GFCLHNKCMFLIYEYMERGSLFCVL-RNDVEAVEL--DWTKRVNIVKSMAH 621
IV+ Y KC+ L+ E G+L L R V +++ W +++
Sbjct: 87 IVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQI------LK 140
Query: 622 ALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAF-VADFGLARLLHPDSSNRTLVVGTYGYI 680
L +LH P I+HRD + + D GLA L +S V+GT +
Sbjct: 141 GLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR--ASFAKAVIGTPEFX 197
Query: 681 APELAYTMAVTEKCDVYSFGVVALEVLMGSHP 712
APE Y E DVY+FG LE +P
Sbjct: 198 APE-XYEEKYDESVDVYAFGXCXLEXATSEYP 228
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 86/197 (43%), Gaps = 10/197 (5%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
+G+G YGSV A +G VA+KKL R +++ E RLL ++H N++ L
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 98
Query: 575 FCLHNKCMFLIYE-YMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPS 633
+ + + Y+ + L N V+ +L ++ + L Y+H
Sbjct: 99 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SAD 155
Query: 634 IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYT-MAVTE 692
I+HRD E + DFGLAR H D T V T Y APE+ M +
Sbjct: 156 IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE-MTGYVATRWYRAPEIMLNWMHYNQ 212
Query: 693 KCDVYSFGVVALEVLMG 709
D++S G + E+L G
Sbjct: 213 TVDIWSVGCIMAELLTG 229
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 86/197 (43%), Gaps = 10/197 (5%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
+G+G YGSV A +G VA+KKL R +++ E RLL ++H N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 94
Query: 575 FCLHNKCMFLIYE-YMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPS 633
+ + + Y+ + L N V+ +L ++ + L Y+H
Sbjct: 95 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SAD 151
Query: 634 IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYT-MAVTE 692
I+HRD E + DFGLAR H D T V T Y APE+ M +
Sbjct: 152 IIHRDLKPSNLAVNEDSELKILDFGLAR--HTD-DEMTGYVATRWYRAPEIMLNWMHYNQ 208
Query: 693 KCDVYSFGVVALEVLMG 709
D++S G + E+L G
Sbjct: 209 TVDIWSVGCIMAELLTG 225
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 106/253 (41%), Gaps = 38/253 (15%)
Query: 478 NTREMTEGANEFSIWNYDGRITFEEMIEATEDFHIKYCIGTGGYGSVYRAQLSSGKLVAL 537
+ R A++ SI+ + I FE++ I IG G +G VY + + L
Sbjct: 10 SARSFPRKASQTSIFLQEWDIPFEQL-------EIGELIGKGRFGQVYHGRWHGEVAIRL 62
Query: 538 KKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCV 597
+ R ++ L++F+ E Q RH N+V G C+ + +I + +L+ V
Sbjct: 63 IDIERDNEDQ---LKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSV 119
Query: 598 LRNDVEAVELDWTKRV--NIVKSMA--HALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAF 653
+R+ ++++ T+++ IVK M HA LH D K V D +
Sbjct: 120 VRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYD----------NGKVV 169
Query: 654 VADFGL---ARLLHPDSSNRTLVV--GTYGYIAPELAYTMA---------VTEKCDVYSF 699
+ DFGL + +L L + G ++APE+ ++ ++ DV++
Sbjct: 170 ITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFAL 229
Query: 700 GVVALEVLMGSHP 712
G + E+ P
Sbjct: 230 GTIWYELHAREWP 242
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 92/214 (42%), Gaps = 24/214 (11%)
Query: 508 EDFHIKYC--IGTGGYGSVYRAQLS-----SGKLVALKKLHRSETEEPAFLESFQTEARL 560
E+ H+KY +G G +GSV + +G LVA+K+L S ++ FQ E ++
Sbjct: 9 EERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQ---QRDFQREIQI 65
Query: 561 LSQIRHRNIVKLYG--FCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKS 618
L + IVK G + + + L+ EY+ G L L+ LD ++ +
Sbjct: 66 LKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQR--HRARLDASRLLLYSSQ 123
Query: 619 MAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYG 678
+ + YL VHRD +ADFGLA+LL D VV G
Sbjct: 124 ICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKD--YYVVREPG 178
Query: 679 -----YIAPELAYTMAVTEKCDVYSFGVVALEVL 707
+ APE + + DV+SFGVV E+
Sbjct: 179 QSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELF 212
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 96/213 (45%), Gaps = 26/213 (12%)
Query: 516 IGTGGYGSVYRAQL------SSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNI 569
+G +G VY+ L + VA+K L + + E P E F+ EA L ++++H N+
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTL-KDKAEGP-LREEFRHEAMLRARLQHPNV 74
Query: 570 VKLYGFCLHNKCMFLIYEYMERGSL--FCVLR---NDVEAVELDWTKR--------VNIV 616
V L G ++ + +I+ Y G L F V+R +DV + + D T + V++V
Sbjct: 75 VCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLV 134
Query: 617 KSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTL--VV 674
+A + YL +VH+D ++D GL R ++ + L +
Sbjct: 135 AQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSL 191
Query: 675 GTYGYIAPELAYTMAVTEKCDVYSFGVVALEVL 707
++APE + D++S+GVV EV
Sbjct: 192 LPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVF 224
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 86/197 (43%), Gaps = 10/197 (5%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
+G+G YGSV A +G VA+KKL R +++ E RLL ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 575 FCLHNKCMFLIYE-YMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPS 633
+ + + Y+ + L N V+ +L ++ + L Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SAD 145
Query: 634 IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYT-MAVTE 692
I+HRD E + DFGLAR H D T V T Y APE+ M +
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLAR--HTD-DEMTGXVATRWYRAPEIMLNWMHYNQ 202
Query: 693 KCDVYSFGVVALEVLMG 709
D++S G + E+L G
Sbjct: 203 TVDIWSVGCIMAELLTG 219
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 87/197 (44%), Gaps = 10/197 (5%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
+G+G YGSV A +G VA+KKL R +++ E RLL ++H N++ L
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 99
Query: 575 FCLHNKCMFLIYE-YMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPS 633
+ + + Y+ + L N V+ +L ++ + L Y+H
Sbjct: 100 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SAD 156
Query: 634 IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYT-MAVTE 692
I+HRD E + DFGLAR H D T V T Y APE+ M +
Sbjct: 157 IIHRDLKPSNLAVNEDXELKILDFGLAR--HTD-DEMTGYVATRWYRAPEIMLNWMHYNQ 213
Query: 693 KCDVYSFGVVALEVLMG 709
D++S G + E+L G
Sbjct: 214 TVDIWSVGCIMAELLTG 230
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 86/197 (43%), Gaps = 10/197 (5%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
+G+G YGSV A +G VA+KKL R +++ E RLL ++H N++ L
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 86
Query: 575 FCLHNKCMFLIYE-YMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPS 633
+ + + Y+ + L N V+ +L ++ + L Y+H
Sbjct: 87 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SAD 143
Query: 634 IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYT-MAVTE 692
I+HRD E + DFGLAR H D T V T Y APE+ M +
Sbjct: 144 IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE-MTGYVATRWYRAPEIMLNWMHYNQ 200
Query: 693 KCDVYSFGVVALEVLMG 709
D++S G + E+L G
Sbjct: 201 TVDIWSVGCIMAELLTG 217
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 99/220 (45%), Gaps = 17/220 (7%)
Query: 503 MIEATEDFHIKYCIGTGGYGSVYRA-QLSSGKLV----ALKKLHRSETEEPAFLESFQTE 557
+++ TE IK +G+G +G+VY+ + G+ V A+K+L E P + E
Sbjct: 15 ILKETEFKKIK-VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANKEILDE 71
Query: 558 ARLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVK 617
A +++ + + ++ +L G CL + LI + M G L +R + + + +N
Sbjct: 72 AYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYL--LNWCV 128
Query: 618 SMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTY 677
+A ++YL +VHRD + DFGLA+LL + G
Sbjct: 129 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 185
Query: 678 --GYIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHPTD 714
++A E T + DV+S+GV E++ GS P D
Sbjct: 186 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 225
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 86/197 (43%), Gaps = 10/197 (5%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
+G+G YGSV A +G VA+KKL R +++ E RLL ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 575 FCLHNKCMFLIYE-YMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPS 633
+ + + Y+ + L N V+ +L ++ + L Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SAD 145
Query: 634 IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAY-TMAVTE 692
I+HRD E + DFGLAR H D T V T Y APE+ M +
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLAR--HTD-DEMTGYVATRWYRAPEIMLNAMHYNQ 202
Query: 693 KCDVYSFGVVALEVLMG 709
D++S G + E+L G
Sbjct: 203 TVDIWSVGCIMAELLTG 219
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 98/203 (48%), Gaps = 19/203 (9%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
+G G Y +VY+ ++G VALK++ + ++EE + + E L+ +++H NIV+LY
Sbjct: 13 LGNGTYATVYKGLNKTTGVYVALKEV-KLDSEEGTPSTAIR-EISLMKELKHENIVRLYD 70
Query: 575 FCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKR---VNIVK----SMAHALSYLH 627
+ L++E+M+ L+ +++ + T R +N+VK + L++ H
Sbjct: 71 VIHTENKLTLVFEFMDND-----LKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCH 125
Query: 628 YDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPE-LAY 686
+ I+HRD + + DFGLAR + + V T Y AP+ L
Sbjct: 126 EN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMG 182
Query: 687 TMAVTEKCDVYSFGVVALEVLMG 709
+ + D++S G + E++ G
Sbjct: 183 SRTYSTSIDIWSCGCILAEMITG 205
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 93/217 (42%), Gaps = 33/217 (15%)
Query: 516 IGTGGYGSVYRA-QLSSGK-----LVALKKLHRSETEEPAFLESFQTEARLLSQI-RHRN 568
+G G +G V A GK VA+K L + + E+ +E +++S + +H N
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEK--EALMSELKIMSHLGQHEN 111
Query: 569 IVKLYGFCLHNKCMFLIYEYMERGSLFCVLR-----------NDVEAVELDWTKR--VNI 615
IV L G C H + +I EY G L LR N E + R ++
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHF 171
Query: 616 VKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSS-----NR 670
+A +++L + +HRD A + DFGLAR + DS+ N
Sbjct: 172 SSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNA 228
Query: 671 TLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVL 707
L V ++APE + T + DV+S+G++ E+
Sbjct: 229 RLPV---KWMAPESIFDCVYTVQSDVWSYGILLWEIF 262
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 86/197 (43%), Gaps = 10/197 (5%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
+G+G YGSV A +G VA+KKL R +++ E RLL ++H N++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 84
Query: 575 FCLHNKCMFLIYE-YMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPS 633
+ + + Y+ + L N V+ +L ++ + L Y+H
Sbjct: 85 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SAD 141
Query: 634 IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYT-MAVTE 692
I+HRD E + DFGLAR H D T V T Y APE+ M +
Sbjct: 142 IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE-MTGYVATRWYRAPEIMLNWMHYNQ 198
Query: 693 KCDVYSFGVVALEVLMG 709
D++S G + E+L G
Sbjct: 199 TVDIWSVGCIMAELLTG 215
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 99/220 (45%), Gaps = 17/220 (7%)
Query: 503 MIEATEDFHIKYCIGTGGYGSVYRA-QLSSGKLV----ALKKLHRSETEEPAFLESFQTE 557
+++ TE IK +G+G +G+VY+ + G+ V A+K+L E P + E
Sbjct: 13 ILKETEFKKIK-VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANKEILDE 69
Query: 558 ARLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVK 617
A +++ + + ++ +L G CL + LI + M G L +R + + + +N
Sbjct: 70 AYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYL--LNWCV 126
Query: 618 SMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTY 677
+A ++YL +VHRD + DFGLA+LL + G
Sbjct: 127 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 183
Query: 678 --GYIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHPTD 714
++A E T + DV+S+GV E++ GS P D
Sbjct: 184 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 86/197 (43%), Gaps = 10/197 (5%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
+G+G YGSV A +G VA+KKL R +++ E RLL ++H N++ L
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 107
Query: 575 FCLHNKCMFLIYE-YMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPS 633
+ + + Y+ + L N V+ +L ++ + L Y+H
Sbjct: 108 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SAD 164
Query: 634 IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYT-MAVTE 692
I+HRD E + DFGLAR H D T V T Y APE+ M +
Sbjct: 165 IIHRDLKPSNLAVNEDCELKILDFGLAR--HTD-DEMTGYVATRWYRAPEIMLNWMHYNQ 221
Query: 693 KCDVYSFGVVALEVLMG 709
D++S G + E+L G
Sbjct: 222 TVDIWSVGCIMAELLTG 238
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 86/197 (43%), Gaps = 10/197 (5%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
+G+G YGSV A +G VA+KKL R +++ E RLL ++H N++ L
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 85
Query: 575 FCLHNKCMFLIYE-YMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPS 633
+ + + Y+ + L N V+ +L ++ + L Y+H
Sbjct: 86 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SAD 142
Query: 634 IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYT-MAVTE 692
I+HRD E + DFGLAR H D T V T Y APE+ M +
Sbjct: 143 IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE-MTGYVATRWYRAPEIMLNWMHYNQ 199
Query: 693 KCDVYSFGVVALEVLMG 709
D++S G + E+L G
Sbjct: 200 TVDIWSVGCIMAELLTG 216
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 91/205 (44%), Gaps = 8/205 (3%)
Query: 508 EDFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHR 567
+DF +G G G V++ LV +KL E + PA E ++L +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK-PAIRNQIIRELQVLHECNSP 64
Query: 568 NIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLH 627
IV YG + + + E+M+ GSL VL+ E +V+I ++ L+YL
Sbjct: 65 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE-QILGKVSI--AVIKGLTYLR 121
Query: 628 YDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYT 687
K I+HRD E + DFG++ L +N VGT Y++PE
Sbjct: 122 E--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS--FVGTRSYMSPERLQG 177
Query: 688 MAVTEKCDVYSFGVVALEVLMGSHP 712
+ + D++S G+ +E+ +G +P
Sbjct: 178 THYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 99/220 (45%), Gaps = 17/220 (7%)
Query: 503 MIEATEDFHIKYCIGTGGYGSVYRA-QLSSGKLV----ALKKLHRSETEEPAFLESFQTE 557
+++ TE IK +G+G +G+VY+ + G+ V A+K+L E P + E
Sbjct: 12 ILKETEFKKIK-VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANKEILDE 68
Query: 558 ARLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVK 617
A +++ + + ++ +L G CL + LI + M G L +R + + + +N
Sbjct: 69 AYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGXLLDYVREHKDNIGSQYL--LNWCV 125
Query: 618 SMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTY 677
+A ++YL +VHRD + DFGLA+LL + G
Sbjct: 126 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 182
Query: 678 --GYIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHPTD 714
++A E T + DV+S+GV E++ GS P D
Sbjct: 183 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 222
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 99/220 (45%), Gaps = 17/220 (7%)
Query: 503 MIEATEDFHIKYCIGTGGYGSVYRA-QLSSGKLV----ALKKLHRSETEEPAFLESFQTE 557
+++ TE IK +G+G +G+VY+ + G+ V A+K+L E P + E
Sbjct: 12 ILKETEFKKIK-VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANKEILDE 68
Query: 558 ARLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVK 617
A +++ + + ++ +L G CL + LI + M G L +R + + + +N
Sbjct: 69 AYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYL--LNWCV 125
Query: 618 SMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTY 677
+A ++YL +VHRD + DFGLA+LL + G
Sbjct: 126 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 182
Query: 678 --GYIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHPTD 714
++A E T + DV+S+GV E++ GS P D
Sbjct: 183 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 222
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 99/220 (45%), Gaps = 17/220 (7%)
Query: 503 MIEATEDFHIKYCIGTGGYGSVYRA-QLSSGKLV----ALKKLHRSETEEPAFLESFQTE 557
+++ TE IK +G+G +G+VY+ + G+ V A+K+L E P + E
Sbjct: 14 ILKETEFKKIK-VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANKEILDE 70
Query: 558 ARLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVK 617
A +++ + + ++ +L G CL + LI + M G L +R + + + +N
Sbjct: 71 AYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYL--LNWCV 127
Query: 618 SMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTY 677
+A ++YL +VHRD + DFGLA+LL + G
Sbjct: 128 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 184
Query: 678 --GYIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHPTD 714
++A E T + DV+S+GV E++ GS P D
Sbjct: 185 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 86/197 (43%), Gaps = 10/197 (5%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
+G+G YGSV A +G VA+KKL R +++ E RLL ++H N++ L
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 85
Query: 575 FCLHNKCMFLIYE-YMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPS 633
+ + + Y+ + L N V+ +L ++ + L Y+H
Sbjct: 86 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SAD 142
Query: 634 IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYT-MAVTE 692
I+HRD E + DFGLAR H D T V T Y APE+ M +
Sbjct: 143 IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE-MTGYVATRWYRAPEIMLNWMHYNQ 199
Query: 693 KCDVYSFGVVALEVLMG 709
D++S G + E+L G
Sbjct: 200 TVDIWSVGCIMAELLTG 216
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 87/197 (44%), Gaps = 10/197 (5%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
+G+G YGSV A +G VA+KKL R +++ E RLL ++H N++ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 93
Query: 575 FCLHNKCMFLIYE-YMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPS 633
+ + + Y+ + L N V+ +L ++ + L Y+H
Sbjct: 94 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SAD 150
Query: 634 IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYT-MAVTE 692
I+HRD E + DFGLAR H D T V T Y APE+ M +
Sbjct: 151 IIHRDLKPSNLAVNEDXELKILDFGLAR--HTDDE-MTGYVATRWYRAPEIMLNWMHYNQ 207
Query: 693 KCDVYSFGVVALEVLMG 709
D++S G + E+L G
Sbjct: 208 TVDIWSVGCIMAELLTG 224
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 91/205 (44%), Gaps = 8/205 (3%)
Query: 508 EDFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHR 567
+DF +G G G V++ LV +KL E + PA E ++L +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK-PAIRNQIIRELQVLHECNSP 64
Query: 568 NIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLH 627
IV YG + + + E+M+ GSL VL+ E +V+I ++ L+YL
Sbjct: 65 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE-QILGKVSI--AVIKGLTYLR 121
Query: 628 YDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYT 687
K I+HRD E + DFG++ L +N VGT Y++PE
Sbjct: 122 E--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS--FVGTRSYMSPERLQG 177
Query: 688 MAVTEKCDVYSFGVVALEVLMGSHP 712
+ + D++S G+ +E+ +G +P
Sbjct: 178 THYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 91/205 (44%), Gaps = 8/205 (3%)
Query: 508 EDFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHR 567
+DF +G G G V++ LV +KL E + PA E ++L +
Sbjct: 25 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK-PAIRNQIIRELQVLHECNSP 83
Query: 568 NIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLH 627
IV YG + + + E+M+ GSL VL+ E +V+I ++ L+YL
Sbjct: 84 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE-QILGKVSI--AVIKGLTYLR 140
Query: 628 YDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYT 687
K I+HRD E + DFG++ L +N VGT Y++PE
Sbjct: 141 E--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS--FVGTRSYMSPERLQG 196
Query: 688 MAVTEKCDVYSFGVVALEVLMGSHP 712
+ + D++S G+ +E+ +G +P
Sbjct: 197 THYSVQSDIWSMGLSLVEMAVGRYP 221
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 91/205 (44%), Gaps = 8/205 (3%)
Query: 508 EDFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHR 567
+DF +G G G V++ LV +KL E + PA E ++L +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK-PAIRNQIIRELQVLHECNSP 64
Query: 568 NIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLH 627
IV YG + + + E+M+ GSL VL+ E +V+I ++ L+YL
Sbjct: 65 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE-QILGKVSI--AVIKGLTYLR 121
Query: 628 YDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYT 687
K I+HRD E + DFG++ L +N VGT Y++PE
Sbjct: 122 E--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS--FVGTRSYMSPERLQG 177
Query: 688 MAVTEKCDVYSFGVVALEVLMGSHP 712
+ + D++S G+ +E+ +G +P
Sbjct: 178 THYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 91/205 (44%), Gaps = 8/205 (3%)
Query: 508 EDFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHR 567
+DF +G G G V++ LV +KL E + PA E ++L +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK-PAIRNQIIRELQVLHECNSP 64
Query: 568 NIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLH 627
IV YG + + + E+M+ GSL VL+ E +V+I ++ L+YL
Sbjct: 65 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE-QILGKVSI--AVIKGLTYLR 121
Query: 628 YDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYT 687
K I+HRD E + DFG++ L +N VGT Y++PE
Sbjct: 122 E--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS--FVGTRSYMSPERLQG 177
Query: 688 MAVTEKCDVYSFGVVALEVLMGSHP 712
+ + D++S G+ +E+ +G +P
Sbjct: 178 THYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 87/197 (44%), Gaps = 10/197 (5%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
+G+G YGSV A +G VA+KKL R +++ E RLL ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 575 FCLHNKCMFLIYE-YMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPS 633
+ + + Y+ + L N V+ +L ++ + L Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIH---SAD 145
Query: 634 IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYT-MAVTE 692
I+HRD E + DFGLAR H D T V T Y APE+ M +
Sbjct: 146 IIHRDLKPSNLAVNEDXELKILDFGLAR--HTDDE-MTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 693 KCDVYSFGVVALEVLMG 709
D++S G + E+L G
Sbjct: 203 TVDIWSVGCIMAELLTG 219
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 86/197 (43%), Gaps = 10/197 (5%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
+G+G YGSV A +G VA+KKL R +++ E RLL ++H N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 94
Query: 575 FCLHNKCMFLIYE-YMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPS 633
+ + + Y+ + L N V+ +L ++ + L Y+H
Sbjct: 95 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SAD 151
Query: 634 IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYT-MAVTE 692
I+HRD E + DFGLAR H D T V T Y APE+ M +
Sbjct: 152 IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE-MTGYVATRWYRAPEIMLNWMHYNQ 208
Query: 693 KCDVYSFGVVALEVLMG 709
D++S G + E+L G
Sbjct: 209 TVDIWSVGCIMAELLTG 225
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 86/197 (43%), Gaps = 10/197 (5%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
+G+G YGSV A +G VA+KKL R +++ E RLL ++H N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 90
Query: 575 FCLHNKCMFLIYE-YMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPS 633
+ + + Y+ + L N V+ +L ++ + L Y+H
Sbjct: 91 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SAD 147
Query: 634 IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYT-MAVTE 692
I+HRD E + DFGLAR H D T V T Y APE+ M +
Sbjct: 148 IIHRDLKPSNLAVNEDCELKILDFGLAR--HTD-DEMTGYVATRWYRAPEIMLNWMHYNQ 204
Query: 693 KCDVYSFGVVALEVLMG 709
D++S G + E+L G
Sbjct: 205 TVDIWSVGCIMAELLTG 221
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 86/197 (43%), Gaps = 10/197 (5%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
+G+G YGSV A +G VA+KKL R +++ E RLL ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 575 FCLHNKCMFLIYE-YMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPS 633
+ + + Y+ + L N V+ +L ++ + L Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SAD 145
Query: 634 IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYT-MAVTE 692
I+HRD E + DFGLAR H D T V T Y APE+ M +
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLAR--HTD-DEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 693 KCDVYSFGVVALEVLMG 709
D++S G + E+L G
Sbjct: 203 TVDIWSVGCIMAELLTG 219
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 86/197 (43%), Gaps = 10/197 (5%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
+G+G YGSV A +G VA+KKL R +++ E RLL ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 575 FCLHNKCMFLIYE-YMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPS 633
+ + + Y+ + L N V+ +L ++ + L Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SAD 145
Query: 634 IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYT-MAVTE 692
I+HRD E + DFGLAR H D T V T Y APE+ M +
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLAR--HTD-DEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 693 KCDVYSFGVVALEVLMG 709
D++S G + E+L G
Sbjct: 203 TVDIWSVGCIMAELLTG 219
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 86/197 (43%), Gaps = 10/197 (5%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
+G+G YGSV A +G VA+KKL R +++ E RLL ++H N++ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 100
Query: 575 FCLHNKCMFLIYE-YMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPS 633
+ + + Y+ + L N V+ +L ++ + L Y+H
Sbjct: 101 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SAD 157
Query: 634 IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYT-MAVTE 692
I+HRD E + DFGLAR H D T V T Y APE+ M +
Sbjct: 158 IIHRDLKPSNLAVNEDCELKILDFGLAR--HTD-DEMTGYVATRWYRAPEIMLNWMHYNQ 214
Query: 693 KCDVYSFGVVALEVLMG 709
D++S G + E+L G
Sbjct: 215 TVDIWSVGCIMAELLTG 231
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 88/182 (48%), Gaps = 20/182 (10%)
Query: 516 IGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
IG G +G V++A+ +G+ VALKK+ E E+ F + E ++L ++H N+V L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKV-LMENEKEGFPITALREIKILQLLKHENVVNLIE 84
Query: 575 FCL-----HNKC---MFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYL 626
C +N+C ++L++++ E L +L N + L KRV ++ + + L Y+
Sbjct: 85 ICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRV--MQMLLNGLYYI 141
Query: 627 HYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLAR---LLHPDSSNRTL-VVGTYGYIAP 682
H + I+HRD +ADFGLAR L NR V T Y P
Sbjct: 142 H---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPP 198
Query: 683 EL 684
EL
Sbjct: 199 EL 200
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 86/197 (43%), Gaps = 10/197 (5%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
+G+G YGSV A +G VA+KKL R +++ E RLL ++H N++ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 100
Query: 575 FCLHNKCMFLIYE-YMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPS 633
+ + + Y+ + L N V+ +L ++ + L Y+H
Sbjct: 101 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SAD 157
Query: 634 IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYT-MAVTE 692
I+HRD E + DFGLAR H D T V T Y APE+ M +
Sbjct: 158 IIHRDLKPSNLAVNEDCELKILDFGLAR--HTD-DEMTGYVATRWYRAPEIMLNWMHYNQ 214
Query: 693 KCDVYSFGVVALEVLMG 709
D++S G + E+L G
Sbjct: 215 TVDIWSVGCIMAELLTG 231
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 86/197 (43%), Gaps = 10/197 (5%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
+G+G YGSV A +G VA+KKL R +++ E RLL ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 575 FCLHNKCMFLIYE-YMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPS 633
+ + + Y+ + L N V+ +L ++ + L Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SAD 145
Query: 634 IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYT-MAVTE 692
I+HRD E + DFGLAR H D T V T Y APE+ M +
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLAR--HTD-DEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 693 KCDVYSFGVVALEVLMG 709
D++S G + E+L G
Sbjct: 203 TVDIWSVGCIMAELLTG 219
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 86/197 (43%), Gaps = 10/197 (5%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
+G+G YGSV A +G VA+KKL R +++ E RLL ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 575 FCLHNKCMFLIYE-YMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPS 633
+ + + Y+ + L N V+ +L ++ + L Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SAD 145
Query: 634 IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYT-MAVTE 692
I+HRD E + DFGLAR H D T V T Y APE+ M +
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLAR--HTD-DEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 693 KCDVYSFGVVALEVLMG 709
D++S G + E+L G
Sbjct: 203 TVDIWSVGCIMAELLTG 219
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 86/197 (43%), Gaps = 10/197 (5%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
+G+G YGSV A +G VA+KKL R +++ E RLL ++H N++ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 108
Query: 575 FCLHNKCMFLIYE-YMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPS 633
+ + + Y+ + L N V+ +L ++ + L Y+H
Sbjct: 109 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SAD 165
Query: 634 IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYT-MAVTE 692
I+HRD E + DFGLAR H D T V T Y APE+ M +
Sbjct: 166 IIHRDLKPSNLAVNEDCELKILDFGLAR--HTD-DEMTGYVATRWYRAPEIMLNWMHYNQ 222
Query: 693 KCDVYSFGVVALEVLMG 709
D++S G + E+L G
Sbjct: 223 TVDIWSVGCIMAELLTG 239
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 99/220 (45%), Gaps = 17/220 (7%)
Query: 503 MIEATEDFHIKYCIGTGGYGSVYRA-QLSSGKLV----ALKKLHRSETEEPAFLESFQTE 557
+++ TE IK +G+G +G+VY+ + G+ V A+K+L E P + E
Sbjct: 11 ILKETEFKKIK-VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANKEILDE 67
Query: 558 ARLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVK 617
A +++ + + ++ +L G CL + LI + M G L +R + + + +N
Sbjct: 68 AYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYL--LNWCV 124
Query: 618 SMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTY 677
+A ++YL +VHRD + DFGLA+LL + G
Sbjct: 125 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 181
Query: 678 --GYIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHPTD 714
++A E T + DV+S+GV E++ GS P D
Sbjct: 182 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 86/197 (43%), Gaps = 10/197 (5%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
+G+G YGSV A +G VA+KKL R +++ E RLL ++H N++ L
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 99
Query: 575 FCLHNKCMFLIYE-YMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPS 633
+ + + Y+ + L N V+ +L ++ + L Y+H
Sbjct: 100 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SAD 156
Query: 634 IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYT-MAVTE 692
I+HRD E + DFGLAR H D T V T Y APE+ M +
Sbjct: 157 IIHRDLKPSNLAVNEDCELKILDFGLAR--HTD-DEMTGYVATRWYRAPEIMLNWMHYNQ 213
Query: 693 KCDVYSFGVVALEVLMG 709
D++S G + E+L G
Sbjct: 214 TVDIWSVGCIMAELLTG 230
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 92/214 (42%), Gaps = 24/214 (11%)
Query: 508 EDFHIKYC--IGTGGYGSVYRAQLS-----SGKLVALKKLHRSETEEPAFLESFQTEARL 560
E+ H+KY +G G +GSV + +G LVA+K+L S ++ FQ E ++
Sbjct: 21 EERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQ---QRDFQREIQI 77
Query: 561 LSQIRHRNIVKLYG--FCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKS 618
L + IVK G + + + L+ EY+ G L L+ LD ++ +
Sbjct: 78 LKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQR--HRARLDASRLLLYSSQ 135
Query: 619 MAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYG 678
+ + YL VHRD +ADFGLA+LL D VV G
Sbjct: 136 ICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKD--YYVVREPG 190
Query: 679 -----YIAPELAYTMAVTEKCDVYSFGVVALEVL 707
+ APE + + DV+SFGVV E+
Sbjct: 191 QSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELF 224
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 86/197 (43%), Gaps = 10/197 (5%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
+G+G YGSV A +G VA+KKL R +++ E RLL ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 575 FCLHNKCMFLIYE-YMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPS 633
+ + + Y+ + L N V+ +L ++ + L Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SAD 145
Query: 634 IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYT-MAVTE 692
I+HRD E + DFGLAR H D T V T Y APE+ M +
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE-MTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 693 KCDVYSFGVVALEVLMG 709
D++S G + E+L G
Sbjct: 203 TVDIWSVGCIMAELLTG 219
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 99/220 (45%), Gaps = 17/220 (7%)
Query: 503 MIEATEDFHIKYCIGTGGYGSVYRA-QLSSGKLV----ALKKLHRSETEEPAFLESFQTE 557
+++ TE IK +G+G +G+VY+ + G+ V A+K+L E P + E
Sbjct: 13 ILKETEFKKIK-VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANKEILDE 69
Query: 558 ARLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVK 617
A +++ + + ++ +L G CL + LI + M G L +R + + + +N
Sbjct: 70 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL--LNWCV 126
Query: 618 SMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTY 677
+A ++YL +VHRD + DFGLA+LL + G
Sbjct: 127 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 183
Query: 678 --GYIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHPTD 714
++A E T + DV+S+GV E++ GS P D
Sbjct: 184 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 99/220 (45%), Gaps = 17/220 (7%)
Query: 503 MIEATEDFHIKYCIGTGGYGSVYRA-QLSSGKLV----ALKKLHRSETEEPAFLESFQTE 557
+++ TE IK +G+G +G+VY+ + G+ V A+K+L E P + E
Sbjct: 36 ILKETEFKKIK-VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANKEILDE 92
Query: 558 ARLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVK 617
A +++ + + ++ +L G CL + LI + M G L +R + + + +N
Sbjct: 93 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL--LNWCV 149
Query: 618 SMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTY 677
+A ++YL +VHRD + DFGLA+LL + G
Sbjct: 150 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 206
Query: 678 --GYIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHPTD 714
++A E T + DV+S+GV E++ GS P D
Sbjct: 207 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 246
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 86/197 (43%), Gaps = 10/197 (5%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
+G+G YGSV A +G VA+KKL R +++ E RLL ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 575 FCLHNKCMFLIYE-YMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPS 633
+ + + Y+ + L N V+ +L ++ + L Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SAD 145
Query: 634 IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYT-MAVTE 692
I+HRD E + DFGLAR H D T V T Y APE+ M +
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLAR--HTD-DEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 693 KCDVYSFGVVALEVLMG 709
D++S G + E+L G
Sbjct: 203 TVDIWSVGCIMAELLTG 219
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 86/197 (43%), Gaps = 10/197 (5%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
+G+G YGSV A +G VA+KKL R +++ E RLL ++H N++ L
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 111
Query: 575 FCLHNKCMFLIYE-YMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPS 633
+ + + Y+ + L N V+ +L ++ + L Y+H
Sbjct: 112 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SAD 168
Query: 634 IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYT-MAVTE 692
I+HRD E + DFGLAR H D T V T Y APE+ M +
Sbjct: 169 IIHRDLKPSNLAVNEDCELKILDFGLAR--HTD-DEMTGYVATRWYRAPEIMLNWMHYNQ 225
Query: 693 KCDVYSFGVVALEVLMG 709
D++S G + E+L G
Sbjct: 226 TVDIWSVGCIMAELLTG 242
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 86/197 (43%), Gaps = 10/197 (5%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
+G+G YGSV A +G VA+KKL R +++ E RLL ++H N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 90
Query: 575 FCLHNKCMFLIYE-YMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPS 633
+ + + Y+ + L N V+ +L ++ + L Y+H
Sbjct: 91 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SAD 147
Query: 634 IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYT-MAVTE 692
I+HRD E + DFGLAR H D T V T Y APE+ M +
Sbjct: 148 IIHRDLKPSNLAVNEDCELKILDFGLAR--HTD-DEMTGYVATRWYRAPEIMLNWMHYNQ 204
Query: 693 KCDVYSFGVVALEVLMG 709
D++S G + E+L G
Sbjct: 205 TVDIWSVGCIMAELLTG 221
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 99/220 (45%), Gaps = 17/220 (7%)
Query: 503 MIEATEDFHIKYCIGTGGYGSVYRA-QLSSGKLV----ALKKLHRSETEEPAFLESFQTE 557
+++ TE IK +G+G +G+VY+ + G+ V A+K+L E P + E
Sbjct: 14 ILKETEFKKIK-VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANKEILDE 70
Query: 558 ARLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVK 617
A +++ + + ++ +L G CL + LI + M G L +R + + + +N
Sbjct: 71 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL--LNWCV 127
Query: 618 SMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTY 677
+A ++YL +VHRD + DFGLA+LL + G
Sbjct: 128 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 184
Query: 678 --GYIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHPTD 714
++A E T + DV+S+GV E++ GS P D
Sbjct: 185 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 86/197 (43%), Gaps = 10/197 (5%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
+G+G YGSV A +G VA+KKL R +++ E RLL ++H N++ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 93
Query: 575 FCLHNKCMFLIYE-YMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPS 633
+ + + Y+ + L N V+ +L ++ + L Y+H
Sbjct: 94 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SAD 150
Query: 634 IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYT-MAVTE 692
I+HRD E + DFGLAR H D T V T Y APE+ M +
Sbjct: 151 IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE-MTGYVATRWYRAPEIMLNWMHYNQ 207
Query: 693 KCDVYSFGVVALEVLMG 709
D++S G + E+L G
Sbjct: 208 TVDIWSVGCIMAELLTG 224
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 86/197 (43%), Gaps = 10/197 (5%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
+G+G YGSV A +G VA+KKL R +++ E RLL ++H N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 90
Query: 575 FCLHNKCMFLIYE-YMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPS 633
+ + + Y+ + L N V+ +L ++ + L Y+H
Sbjct: 91 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SAD 147
Query: 634 IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYT-MAVTE 692
I+HRD E + DFGLAR H D T V T Y APE+ M +
Sbjct: 148 IIHRDLKPSNLAVNEDCELKILDFGLAR--HTD-DEMTGYVATRWYRAPEIMLNWMHYNQ 204
Query: 693 KCDVYSFGVVALEVLMG 709
D++S G + E+L G
Sbjct: 205 TVDIWSVGCIMAELLTG 221
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 86/197 (43%), Gaps = 10/197 (5%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
+G+G YGSV A +G VA+KKL R +++ E RLL ++H N++ L
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 87
Query: 575 FCLHNKCMFLIYE-YMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPS 633
+ + + Y+ + L N V+ +L ++ + L Y+H
Sbjct: 88 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SAD 144
Query: 634 IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYT-MAVTE 692
I+HRD E + DFGLAR H D T V T Y APE+ M +
Sbjct: 145 IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE-MTGYVATRWYRAPEIMLNWMHYNQ 201
Query: 693 KCDVYSFGVVALEVLMG 709
D++S G + E+L G
Sbjct: 202 TVDIWSVGCIMAELLTG 218
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 99/220 (45%), Gaps = 17/220 (7%)
Query: 503 MIEATEDFHIKYCIGTGGYGSVYRA-QLSSGKLV----ALKKLHRSETEEPAFLESFQTE 557
+++ TE IK +G+G +G+VY+ + G+ V A+K+L E P + E
Sbjct: 11 ILKETEFKKIK-VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANKEILDE 67
Query: 558 ARLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVK 617
A +++ + + ++ +L G CL + LI + M G L +R + + + +N
Sbjct: 68 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGXLLDYVREHKDNIGSQYL--LNWCV 124
Query: 618 SMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTY 677
+A ++YL +VHRD + DFGLA+LL + G
Sbjct: 125 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 181
Query: 678 --GYIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHPTD 714
++A E T + DV+S+GV E++ GS P D
Sbjct: 182 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 88/182 (48%), Gaps = 20/182 (10%)
Query: 516 IGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
IG G +G V++A+ +G+ VALKK+ E E+ F + E ++L ++H N+V L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKV-LMENEKEGFPITALREIKILQLLKHENVVNLIE 84
Query: 575 FCL-----HNKC---MFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYL 626
C +N+C ++L++++ E L +L N + L KRV ++ + + L Y+
Sbjct: 85 ICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRV--MQMLLNGLYYI 141
Query: 627 HYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLAR---LLHPDSSNRTL-VVGTYGYIAP 682
H + I+HRD +ADFGLAR L NR V T Y P
Sbjct: 142 H---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPP 198
Query: 683 EL 684
EL
Sbjct: 199 EL 200
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 86/197 (43%), Gaps = 10/197 (5%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
+G+G YGSV A +G VA+KKL R +++ E RLL ++H N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 94
Query: 575 FCLHNKCMFLIYE-YMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPS 633
+ + + Y+ + L N V+ +L ++ + L Y+H
Sbjct: 95 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SAD 151
Query: 634 IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYT-MAVTE 692
I+HRD E + DFGLAR H D T V T Y APE+ M +
Sbjct: 152 IIHRDLKPSNLAVNEDCELKILDFGLAR--HTD-DEMTGYVATRWYRAPEIMLNWMHYNQ 208
Query: 693 KCDVYSFGVVALEVLMG 709
D++S G + E+L G
Sbjct: 209 TVDIWSVGCIMAELLTG 225
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 88/182 (48%), Gaps = 20/182 (10%)
Query: 516 IGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
IG G +G V++A+ +G+ VALKK+ E E+ F + E ++L ++H N+V L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKV-LMENEKEGFPITALREIKILQLLKHENVVNLIE 84
Query: 575 FCL-----HNKC---MFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYL 626
C +N+C ++L++++ E L +L N + L KRV ++ + + L Y+
Sbjct: 85 ICRTKASPYNRCKASIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRV--MQMLLNGLYYI 141
Query: 627 HYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLAR---LLHPDSSNRTL-VVGTYGYIAP 682
H + I+HRD +ADFGLAR L NR V T Y P
Sbjct: 142 H---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPP 198
Query: 683 EL 684
EL
Sbjct: 199 EL 200
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 99/220 (45%), Gaps = 17/220 (7%)
Query: 503 MIEATEDFHIKYCIGTGGYGSVYRA-QLSSGKLV----ALKKLHRSETEEPAFLESFQTE 557
+++ TE IK +G+G +G+VY+ + G+ V A+K+L E P + E
Sbjct: 14 ILKETEFKKIK-VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANKEILDE 70
Query: 558 ARLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVK 617
A +++ + + ++ +L G CL + LI + M G L +R + + + +N
Sbjct: 71 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL--LNWCV 127
Query: 618 SMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTY 677
+A ++YL +VHRD + DFGLA+LL + G
Sbjct: 128 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 184
Query: 678 --GYIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHPTD 714
++A E T + DV+S+GV E++ GS P D
Sbjct: 185 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 86/197 (43%), Gaps = 10/197 (5%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
+G+G YGSV A +G VA+KKL R +++ E RLL ++H N++ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 93
Query: 575 FCLHNKCMFLIYE-YMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPS 633
+ + + Y+ + L N V+ +L ++ + L Y+H
Sbjct: 94 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SAD 150
Query: 634 IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYT-MAVTE 692
I+HRD E + DFGLAR H D T V T Y APE+ M +
Sbjct: 151 IIHRDLKPSNLAVNEDCELKILDFGLAR--HTD-DEMTGYVATRWYRAPEIMLNWMHYNQ 207
Query: 693 KCDVYSFGVVALEVLMG 709
D++S G + E+L G
Sbjct: 208 TVDIWSVGCIMAELLTG 224
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 99/220 (45%), Gaps = 17/220 (7%)
Query: 503 MIEATEDFHIKYCIGTGGYGSVYRA-QLSSGKLV----ALKKLHRSETEEPAFLESFQTE 557
+++ TE IK +G+G +G+VY+ + G+ V A+K+L E P + E
Sbjct: 18 ILKETEFKKIK-VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANKEILDE 74
Query: 558 ARLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVK 617
A +++ + + ++ +L G CL + LI + M G L +R + + + +N
Sbjct: 75 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL--LNWCV 131
Query: 618 SMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTY 677
+A ++YL +VHRD + DFGLA+LL + G
Sbjct: 132 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 188
Query: 678 --GYIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHPTD 714
++A E T + DV+S+GV E++ GS P D
Sbjct: 189 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 86/197 (43%), Gaps = 10/197 (5%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
+G+G YGSV A +G VA+KKL R +++ E RLL ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 575 FCLHNKCMFLIYE-YMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPS 633
+ + + Y+ + L N V+ +L ++ + L Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SAD 145
Query: 634 IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYT-MAVTE 692
I+HRD E + DFGLAR H D T V T Y APE+ M +
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLAR--HTD-DEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 693 KCDVYSFGVVALEVLMG 709
D++S G + E+L G
Sbjct: 203 TVDIWSVGCIMAELLTG 219
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 86/197 (43%), Gaps = 10/197 (5%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
+G+G YGSV A +G VA+KKL R +++ E RLL ++H N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 95
Query: 575 FCLHNKCMFLIYE-YMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPS 633
+ + + Y+ + L N V+ +L ++ + L Y+H
Sbjct: 96 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SAD 152
Query: 634 IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYT-MAVTE 692
I+HRD E + DFGLAR H D T V T Y APE+ M +
Sbjct: 153 IIHRDLKPSNLAVNEDCELKILDFGLAR--HTD-DEMTGYVATRWYRAPEIMLNWMHYNQ 209
Query: 693 KCDVYSFGVVALEVLMG 709
D++S G + E+L G
Sbjct: 210 TVDIWSVGCIMAELLTG 226
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 99/220 (45%), Gaps = 17/220 (7%)
Query: 503 MIEATEDFHIKYCIGTGGYGSVYRA-QLSSGKLV----ALKKLHRSETEEPAFLESFQTE 557
+++ TE IK +G+G +G+VY+ + G+ V A+K+L E P + E
Sbjct: 11 ILKETEFKKIK-VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANKEILDE 67
Query: 558 ARLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVK 617
A +++ + + ++ +L G CL + LI + M G L +R + + + +N
Sbjct: 68 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL--LNWCV 124
Query: 618 SMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTY 677
+A ++YL +VHRD + DFGLA+LL + G
Sbjct: 125 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 181
Query: 678 --GYIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHPTD 714
++A E T + DV+S+GV E++ GS P D
Sbjct: 182 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 88/182 (48%), Gaps = 20/182 (10%)
Query: 516 IGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
IG G +G V++A+ +G+ VALKK+ E E+ F + E ++L ++H N+V L
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKV-LMENEKEGFPITALREIKILQLLKHENVVNLIE 83
Query: 575 FCL-----HNKC---MFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYL 626
C +N+C ++L++++ E L +L N + L KRV ++ + + L Y+
Sbjct: 84 ICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRV--MQMLLNGLYYI 140
Query: 627 HYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLAR---LLHPDSSNRTL-VVGTYGYIAP 682
H + I+HRD +ADFGLAR L NR V T Y P
Sbjct: 141 H---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPP 197
Query: 683 EL 684
EL
Sbjct: 198 EL 199
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 102/226 (45%), Gaps = 22/226 (9%)
Query: 493 NYDGRITFEEMIEATEDFHIKYCIGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFL 551
+YD + + E+ E IGTGG+ V A + +G++VA+K + ++ + L
Sbjct: 4 DYDELLKYYELHET---------IGTGGFAKVKLACHILTGEMVAIKIMDKNTL--GSDL 52
Query: 552 ESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLF-CVLRNDVEAVELDWT 610
+TE L +RH++I +LY +F++ EY G LF ++ D + E
Sbjct: 53 PRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEE---E 109
Query: 611 KRVNIVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGL-ARLLHPDSSN 669
RV + + + A++Y+H HRD + + DFGL A+ +
Sbjct: 110 TRV-VFRQIVSAVAYVH---SQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYH 165
Query: 670 RTLVVGTYGYIAPELAYTMA-VTEKCDVYSFGVVALEVLMGSHPTD 714
G+ Y APEL + + + DV+S G++ ++ G P D
Sbjct: 166 LQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFD 211
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 86/197 (43%), Gaps = 10/197 (5%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
+G+G YGSV A +G VA+KKL R +++ E RLL ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 575 FCLHNKCMFLIYE-YMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPS 633
+ + + Y+ + L N V+ +L ++ + L Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIH---SAD 145
Query: 634 IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYT-MAVTE 692
I+HRD E + DFGLAR H D T V T Y APE+ M +
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE-MTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 693 KCDVYSFGVVALEVLMG 709
D++S G + E+L G
Sbjct: 203 TVDIWSVGCIMAELLTG 219
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 99/220 (45%), Gaps = 17/220 (7%)
Query: 503 MIEATEDFHIKYCIGTGGYGSVYRA-QLSSGKLV----ALKKLHRSETEEPAFLESFQTE 557
+++ TE IK +G+G +G+VY+ + G+ V A+K+L E P + E
Sbjct: 21 ILKETEFKKIK-VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANKEILDE 77
Query: 558 ARLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVK 617
A +++ + + ++ +L G CL + LI + M G L +R + + + +N
Sbjct: 78 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL--LNWCV 134
Query: 618 SMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTY 677
+A ++YL +VHRD + DFGLA+LL + G
Sbjct: 135 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 191
Query: 678 --GYIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHPTD 714
++A E T + DV+S+GV E++ GS P D
Sbjct: 192 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 231
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 99/220 (45%), Gaps = 17/220 (7%)
Query: 503 MIEATEDFHIKYCIGTGGYGSVYRA-QLSSGKLV----ALKKLHRSETEEPAFLESFQTE 557
+++ TE IK +G+G +G+VY+ + G+ V A+K+L E P + E
Sbjct: 14 ILKETEFKKIK-VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANKEILDE 70
Query: 558 ARLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVK 617
A +++ + + ++ +L G CL + LI + M G L +R + + + +N
Sbjct: 71 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL--LNWCV 127
Query: 618 SMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTY 677
+A ++YL +VHRD + DFGLA+LL + G
Sbjct: 128 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 184
Query: 678 --GYIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHPTD 714
++A E T + DV+S+GV E++ GS P D
Sbjct: 185 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 85/197 (43%), Gaps = 10/197 (5%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
+G+G YGSV A +G VA+KKL R +++ E RLL ++H N++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 84
Query: 575 FCLHNKCMFLIYE-YMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPS 633
+ + + Y+ + L N V+ +L ++ + L Y+H
Sbjct: 85 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SAD 141
Query: 634 IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYT-MAVTE 692
I+HRD E + DFGLAR H D V T Y APE+ M +
Sbjct: 142 IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMAGF-VATRWYRAPEIMLNWMHYNQ 198
Query: 693 KCDVYSFGVVALEVLMG 709
D++S G + E+L G
Sbjct: 199 TVDIWSVGCIMAELLTG 215
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 99/220 (45%), Gaps = 17/220 (7%)
Query: 503 MIEATEDFHIKYCIGTGGYGSVYRA-QLSSGKLV----ALKKLHRSETEEPAFLESFQTE 557
+++ TE IK +G+G +G+VY+ + G+ V A+K+L E P + E
Sbjct: 11 ILKETEFKKIK-VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANKEILDE 67
Query: 558 ARLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVK 617
A +++ + + ++ +L G CL + LI + M G L +R + + + +N
Sbjct: 68 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL--LNWCV 124
Query: 618 SMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTY 677
+A ++YL +VHRD + DFGLA+LL + G
Sbjct: 125 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 181
Query: 678 --GYIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHPTD 714
++A E T + DV+S+GV E++ GS P D
Sbjct: 182 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 91/214 (42%), Gaps = 24/214 (11%)
Query: 508 EDFHIKYC--IGTGGYGSVYRAQLS-----SGKLVALKKLHRSETEEPAFLESFQTEARL 560
E+ H+KY +G G +GSV + +G LVA+K+L S ++ FQ E ++
Sbjct: 5 EERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQ---QRDFQREIQI 61
Query: 561 LSQIRHRNIVKLYG--FCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKS 618
L + IVK G + + L+ EY+ G L L+ LD ++ +
Sbjct: 62 LKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQR--HRARLDASRLLLYSSQ 119
Query: 619 MAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYG 678
+ + YL VHRD +ADFGLA+LL D VV G
Sbjct: 120 ICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKD--XXVVREPG 174
Query: 679 -----YIAPELAYTMAVTEKCDVYSFGVVALEVL 707
+ APE + + DV+SFGVV E+
Sbjct: 175 QSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELF 208
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 99/220 (45%), Gaps = 17/220 (7%)
Query: 503 MIEATEDFHIKYCIGTGGYGSVYRA-QLSSGKLV----ALKKLHRSETEEPAFLESFQTE 557
+++ TE IK +G+G +G+VY+ + G+ V A+K+L E P + E
Sbjct: 17 ILKETEFKKIK-VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANKEILDE 73
Query: 558 ARLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVK 617
A +++ + + ++ +L G CL + LI + M G L +R + + + +N
Sbjct: 74 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL--LNWCV 130
Query: 618 SMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTY 677
+A ++YL +VHRD + DFGLA+LL + G
Sbjct: 131 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 187
Query: 678 --GYIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHPTD 714
++A E T + DV+S+GV E++ GS P D
Sbjct: 188 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 227
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 97/210 (46%), Gaps = 12/210 (5%)
Query: 507 TEDFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRH 566
++++ +K +G G + V R + L K+ ++ + + EAR+ +++H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 567 RNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVEL-DWTKRVNIVKSMAHALSY 625
NIV+L+ +L+++ + G LF D+ A E + ++ + +++Y
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELF----EDIVAREFYSEADASHCIQQILESIAY 120
Query: 626 LHYDCKPSIVHRDXXXXXXXXXXXXEAF---VADFGLARLLHPDSSNRTLVVGTYGYIAP 682
H + IVHR+ + +ADFGLA ++ DS GT GY++P
Sbjct: 121 CHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-DSEAWHGFAGTPGYLSP 176
Query: 683 ELAYTMAVTEKCDVYSFGVVALEVLMGSHP 712
E+ ++ D+++ GV+ +L+G P
Sbjct: 177 EVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 85/197 (43%), Gaps = 10/197 (5%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
+G+G YGSV A +G VA+KKL R +++ E RLL ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 575 FCLHNKCMFLIYE-YMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPS 633
+ + + Y+ + L N V+ +L ++ + L Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SAD 145
Query: 634 IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYT-MAVTE 692
I+HRD E + DFGLAR H D V T Y APE+ M +
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMAGF-VATRWYRAPEIMLNWMHYNQ 202
Query: 693 KCDVYSFGVVALEVLMG 709
D++S G + E+L G
Sbjct: 203 TVDIWSVGCIMAELLTG 219
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 85/197 (43%), Gaps = 10/197 (5%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
+G+G YGSV A +G VA+KKL R +++ E RLL ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 575 FCLHNKCMFLIYE-YMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPS 633
+ + + Y+ + L N V+ +L ++ + L Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SAD 145
Query: 634 IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYT-MAVTE 692
I+HRD E + DFGLAR H D V T Y APE+ M +
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMAGF-VATRWYRAPEIMLNWMHYNQ 202
Query: 693 KCDVYSFGVVALEVLMG 709
D++S G + E+L G
Sbjct: 203 TVDIWSVGCIMAELLTG 219
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 86/197 (43%), Gaps = 10/197 (5%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
+G+G YGSV A +G VA+KKL R +++ E RLL ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 575 FCLHNKCMFLIYE-YMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPS 633
+ + + Y+ + L N V++ +L ++ + L Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLIYQILRGLKYIH---SAD 145
Query: 634 IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYT-MAVTE 692
I+HRD E + DFGL R H D T V T Y APE+ M +
Sbjct: 146 IIHRDLKPSNLAVNEDSELKILDFGLCR--HTD-DEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 693 KCDVYSFGVVALEVLMG 709
D++S G + E+L G
Sbjct: 203 TVDIWSVGCIMAELLTG 219
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 85/197 (43%), Gaps = 10/197 (5%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
+G+G YGSV A +G VA+KKL R +++ E RLL ++H N++ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 108
Query: 575 FCLHNKCMFLIYE-YMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPS 633
+ + + Y+ + L N V+ +L ++ + L Y+H
Sbjct: 109 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SAD 165
Query: 634 IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYT-MAVTE 692
I+HRD E + DFGLAR H D V T Y APE+ M +
Sbjct: 166 IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMXG-XVATRWYRAPEIMLNWMHYNQ 222
Query: 693 KCDVYSFGVVALEVLMG 709
D++S G + E+L G
Sbjct: 223 TVDIWSVGCIMAELLTG 239
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 86/197 (43%), Gaps = 10/197 (5%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
+G+G YGSV A +G VA+KKL R +++ E RLL ++H N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 94
Query: 575 FCLHNKCMFLIYE-YMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPS 633
+ + + Y+ + L N V+ +L ++ + L Y+H
Sbjct: 95 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SAD 151
Query: 634 IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYT-MAVTE 692
I+HRD E + DFGLAR H D T V T Y APE+ M +
Sbjct: 152 IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE-MTGYVATRWYRAPEIMLNWMHYNQ 208
Query: 693 KCDVYSFGVVALEVLMG 709
D++S G + E+L G
Sbjct: 209 TVDIWSVGCIMAELLTG 225
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 97/210 (46%), Gaps = 12/210 (5%)
Query: 507 TEDFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRH 566
++++ +K +G G + V R + L K+ ++ + + EAR+ +++H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 567 RNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVEL-DWTKRVNIVKSMAHALSY 625
NIV+L+ +L+++ + G LF D+ A E + ++ + +++Y
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELF----EDIVAREFYSEADASHCIQQILESIAY 120
Query: 626 LHYDCKPSIVHRDXXXXXXXXXXXXEAF---VADFGLARLLHPDSSNRTLVVGTYGYIAP 682
H + IVHR+ + +ADFGLA ++ DS GT GY++P
Sbjct: 121 CHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-DSEAWHGFAGTPGYLSP 176
Query: 683 ELAYTMAVTEKCDVYSFGVVALEVLMGSHP 712
E+ ++ D+++ GV+ +L+G P
Sbjct: 177 EVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 99/220 (45%), Gaps = 17/220 (7%)
Query: 503 MIEATEDFHIKYCIGTGGYGSVYRA-QLSSGKLV----ALKKLHRSETEEPAFLESFQTE 557
+++ TE IK +G+G +G+VY+ + G+ V A+K+L E P + E
Sbjct: 5 ILKETEFKKIK-VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANKEILDE 61
Query: 558 ARLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVK 617
A +++ + + ++ +L G CL + LI + M G L +R + + + +N
Sbjct: 62 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL--LNWCV 118
Query: 618 SMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTY 677
+A ++YL +VHRD + DFGLA+LL + G
Sbjct: 119 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 175
Query: 678 --GYIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHPTD 714
++A E T + DV+S+GV E++ GS P D
Sbjct: 176 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 215
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 97/215 (45%), Gaps = 21/215 (9%)
Query: 505 EATEDFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQI 564
E E + I +G G +G V+R +S K + K + + + + + E +L+
Sbjct: 2 ELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLV---KKEISILNIA 58
Query: 565 RHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALS 624
RHRNI+ L+ + + +I+E++ +F R + A EL+ + V+ V + AL
Sbjct: 59 RHRNILHLHESFESMEELVMIFEFISGLDIF--ERINTSAFELNEREIVSYVHQVCEALQ 116
Query: 625 YL------HYDCKPS-IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTY 677
+L H+D +P I+++ + +FG AR L P + R L
Sbjct: 117 FLHSHNIGHFDIRPENIIYQTRRSSTIK--------IIEFGQARQLKPGDNFRLLFTAP- 167
Query: 678 GYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHP 712
Y APE+ V+ D++S G + +L G +P
Sbjct: 168 EYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINP 202
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 107/243 (44%), Gaps = 31/243 (12%)
Query: 473 KKFNPNTREMTEGANEFSIWNYDGRITFEEMIEATEDFHIKYCIGTGGYGSVYRA-QLSS 531
KK+ P E+ +G S+++Y + I +G+G +G V+R + ++
Sbjct: 35 KKYVPQPVEVKQG----SVYDY---------------YDILEELGSGAFGVVHRCVEKAT 75
Query: 532 GKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMER 591
G++ K ++ T P + + E +++Q+ H ++ L+ M LI E++
Sbjct: 76 GRVFVAKFIN---TPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSG 132
Query: 592 GSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXE 651
G LF R E ++ + +N ++ L ++H + SIVH D
Sbjct: 133 GELFD--RIAAEDYKMSEAEVINYMRQACEGLKHMH---EHSIVHLDIKPENIMCETKKA 187
Query: 652 AFVA--DFGLARLLHPDSSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMG 709
+ V DFGLA L+PD + + T + APE+ V D+++ GV+ +L G
Sbjct: 188 SSVKIIDFGLATKLNPDEIVK-VTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSG 246
Query: 710 SHP 712
P
Sbjct: 247 LSP 249
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 97/210 (46%), Gaps = 12/210 (5%)
Query: 507 TEDFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRH 566
++++ +K +G G + V R + L K+ ++ + + EAR+ +++H
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 63
Query: 567 RNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVEL-DWTKRVNIVKSMAHALSY 625
NIV+L+ +L+++ + G LF D+ A E + ++ + +++Y
Sbjct: 64 PNIVRLHDSIQEESFHYLVFDLVTGGELF----EDIVAREFYSEADASHCIQQILESIAY 119
Query: 626 LHYDCKPSIVHRDXXXXXXXXXXXXEAF---VADFGLARLLHPDSSNRTLVVGTYGYIAP 682
H + IVHR+ + +ADFGLA ++ DS GT GY++P
Sbjct: 120 CHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-DSEAWHGFAGTPGYLSP 175
Query: 683 ELAYTMAVTEKCDVYSFGVVALEVLMGSHP 712
E+ ++ D+++ GV+ +L+G P
Sbjct: 176 EVLKKDPYSKPVDIWACGVILYILLVGYPP 205
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 88/204 (43%), Gaps = 10/204 (4%)
Query: 513 KYCIGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVK 571
+ +G G YG VY + LS+ +A+K++ ++ + + E L ++H+NIV+
Sbjct: 13 RVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSR---YSQPLHEEIALHKHLKHKNIVQ 69
Query: 572 LYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCK 631
G N + + E + GSL +LR+ ++ + K + L YLH +
Sbjct: 70 YLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN-- 127
Query: 632 PSIVHRDXXXXXXXXXXXXEAF-VADFGLARLLHPDSSNRTLVVGTYGYIAPEL--AYTM 688
IVHRD ++DFG ++ L + GT Y+APE+
Sbjct: 128 -QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPR 186
Query: 689 AVTEKCDVYSFGVVALEVLMGSHP 712
+ D++S G +E+ G P
Sbjct: 187 GYGKAADIWSLGCTIIEMATGKPP 210
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 96/200 (48%), Gaps = 11/200 (5%)
Query: 516 IGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
IG G YG+V++A+ + ++VALK++ R + ++ S E LL +++H+NIV+L+
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRV-RLDDDDEGVPSSALREICLLKELKHKNIVRLHD 68
Query: 575 FCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKS-MAHALSYLHYDCKPS 633
+K + L++E+ ++ L+ ++ D IVKS + L L + +
Sbjct: 69 VLHSDKKLTLVFEFCDQD-----LKKYFDSCNGDLDP--EIVKSFLFQLLKGLGFCHSRN 121
Query: 634 IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYTMAV-TE 692
++HRD E +A+FGLAR + V T Y P++ + + +
Sbjct: 122 VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYST 181
Query: 693 KCDVYSFGVVALEVLMGSHP 712
D++S G + E+ P
Sbjct: 182 SIDMWSAGCIFAELANAGRP 201
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 89/205 (43%), Gaps = 10/205 (4%)
Query: 512 IKYCIGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIV 570
I+ +G G +G V A + + VALK + R ++ + E L +RH +I+
Sbjct: 13 IRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHII 72
Query: 571 KLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDC 630
KLY + ++ EY G LF + VE + + + + A+ Y H
Sbjct: 73 KLYDVITTPTDIVMVIEYAG-GELFDYI---VEKKRMTEDEGRRFFQQIICAIEYCH--- 125
Query: 631 KPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAY-TMA 689
+ IVHRD +ADFGL+ ++ D + G+ Y APE+ +
Sbjct: 126 RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIM-TDGNFLKTSCGSPNYAAPEVINGKLY 184
Query: 690 VTEKCDVYSFGVVALEVLMGSHPTD 714
+ DV+S G+V +L+G P D
Sbjct: 185 AGPEVDVWSCGIVLYVMLVGRLPFD 209
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 97/221 (43%), Gaps = 35/221 (15%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIR-HRNIVKLY 573
+G G YG V+++ +G++VA+KK+ + +F+ E +L+++ H NIV L
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFR-EIMILTELSGHENIVNLL 75
Query: 574 GF--CLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCK 631
+++ ++L+++YME L V+R ++ L+ + +V + + YLH
Sbjct: 76 NVLRADNDRDVYLVFDYME-TDLHAVIRANI----LEPVHKQYVVYQLIKVIKYLH---S 127
Query: 632 PSIVHRDXXXXXXXXXXXXEAFVADFGLARL---------------------LHPDSSNR 670
++HRD VADFGL+R D
Sbjct: 128 GGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPIL 187
Query: 671 TLVVGTYGYIAPE-LAYTMAVTEKCDVYSFGVVALEVLMGS 710
T V T Y APE L + T+ D++S G + E+L G
Sbjct: 188 TDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 87/201 (43%), Gaps = 10/201 (4%)
Query: 516 IGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
+G G YG VY + LS+ +A+K++ ++ + + E L ++H+NIV+ G
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSR---YSQPLHEEIALHKHLKHKNIVQYLG 86
Query: 575 FCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSI 634
N + + E + GSL +LR+ ++ + K + L YLH + I
Sbjct: 87 SFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QI 143
Query: 635 VHRDXXXXXXXXXXXXEAF-VADFGLARLLHPDSSNRTLVVGTYGYIAPEL--AYTMAVT 691
VHRD ++DFG ++ L + GT Y+APE+
Sbjct: 144 VHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYG 203
Query: 692 EKCDVYSFGVVALEVLMGSHP 712
+ D++S G +E+ G P
Sbjct: 204 KAADIWSLGCTIIEMATGKPP 224
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 20/202 (9%)
Query: 516 IGTGGYGSVYRAQLSSGKL-VALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
IG G YG V A + K+ VA+KK+ S E + + E ++L + RH NI+ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGIND 88
Query: 575 FCL-----HNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYD 629
K ++++ + ME L+ +L+ L + + L Y+H
Sbjct: 89 IIRAPTIEQMKDVYIVQDLME-TDLYKLLKTQ----HLSNDHICYFLYQILRGLKYIH-- 141
Query: 630 CKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNR---TLVVGTYGYIAPELAY 686
+++HRD + + DFGLAR+ PD + T V T Y APE+
Sbjct: 142 -SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 687 -TMAVTEKCDVYSFGVVALEVL 707
+ T+ D++S G + E+L
Sbjct: 201 NSKGYTKSIDIWSVGCILAEML 222
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 86/197 (43%), Gaps = 10/197 (5%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
+G+G YGSV A +G VA+KKL + +++ E RLL ++H N++ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 100
Query: 575 FCLHNKCMFLIYE-YMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPS 633
+ + + Y+ + L N V+ +L ++ + L Y+H
Sbjct: 101 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SAD 157
Query: 634 IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYT-MAVTE 692
I+HRD E + DFGLAR H D T V T Y APE+ M +
Sbjct: 158 IIHRDLKPSNLAVNEDCELKILDFGLAR--HTD-DEMTGYVATRWYRAPEIMLNWMHYNQ 214
Query: 693 KCDVYSFGVVALEVLMG 709
D++S G + E+L G
Sbjct: 215 TVDIWSVGCIMAELLTG 231
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 98/216 (45%), Gaps = 23/216 (10%)
Query: 507 TEDFHIKYCIGTGGYGSVYRA-QLSSG-----KLVALKKLHRSETEEPAFLESFQTEARL 560
T+++ + IG G + V R +L +G K++ KKL + ++ + EAR+
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQK------LEREARI 56
Query: 561 LSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVEL-DWTKRVNIVKSM 619
++H NIV+L+ +L+++ + G LF D+ A E + ++ +
Sbjct: 57 CRLLKHSNIVRLHDSISEEGFHYLVFDLVTGGELF----EDIVAREYYSEADASHCIQQI 112
Query: 620 AHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAF---VADFGLARLLHPDSSNRTLVVGT 676
A+ + H + +VHRD + +ADFGLA + D GT
Sbjct: 113 LEAVLHCH---QMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGT 169
Query: 677 YGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHP 712
GY++PE+ A + D+++ GV+ +L+G P
Sbjct: 170 PGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPP 205
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 92/227 (40%), Gaps = 34/227 (14%)
Query: 509 DFHIKYCIGTGGYGSVYRAQLSSGKL---VALKKLHRSETEEPAFLESFQTEARLLSQIR 565
D + IG G +G V +A++ L A+K++ +++ F E +L ++
Sbjct: 26 DIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDH--RDFAGELEVLCKLG 83
Query: 566 HR-NIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRN-------------DVEAVELDWTK 611
H NI+ L G C H ++L EY G+L LR + A L +
Sbjct: 84 HHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQ 143
Query: 612 RVNIVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRT 671
++ +A + YL + +HRD A +ADFGL+R
Sbjct: 144 LLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSR------GQEV 194
Query: 672 LVVGTYG-----YIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHP 712
V T G ++A E T DV+S+GV+ E++ +G P
Sbjct: 195 YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTP 241
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 88/203 (43%), Gaps = 18/203 (8%)
Query: 515 CIGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLY 573
IGTG +G V + + +G A+K L + + + +E E R+L + +VKL
Sbjct: 48 TIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 574 GFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELD---WTKRVNIVKSMAHALSYLHYDC 630
N ++++ EY+ G +F LR E + ++ + H+L ++ D
Sbjct: 108 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 631 KPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTL-VVGTYGYIAPELAYTMA 689
KP + D VADFG A+ + RT + GT Y+APE+ +
Sbjct: 168 KPENLLIDQQGYIK---------VADFGFAKRV----KGRTWXLCGTPEYLAPEIILSKG 214
Query: 690 VTEKCDVYSFGVVALEVLMGSHP 712
+ D ++ GV+ E+ G P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 20/202 (9%)
Query: 516 IGTGGYGSVYRAQLSSGKL-VALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
IG G YG V A + K+ VA+KK+ S E + + E ++L + RH NI+ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGIND 88
Query: 575 FCL-----HNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYD 629
K ++++ + ME L+ +L+ L + + L Y+H
Sbjct: 89 IIRAPTIEQMKDVYIVQDLME-TDLYKLLKTQ----HLSNDHICYFLYQILRGLKYIH-- 141
Query: 630 CKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNR---TLVVGTYGYIAPELAY 686
+++HRD + + DFGLAR+ PD + T V T Y APE+
Sbjct: 142 -SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 687 -TMAVTEKCDVYSFGVVALEVL 707
+ T+ D++S G + E+L
Sbjct: 201 NSKGYTKSIDIWSVGCILAEML 222
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 85/197 (43%), Gaps = 10/197 (5%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
+G+G YGSV A +G VA+KKL R +++ E RLL ++H N++ L
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 111
Query: 575 FCLHNKCMFLIYE-YMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPS 633
+ + + Y+ + L N V+ +L ++ + L Y+H
Sbjct: 112 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SAD 168
Query: 634 IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYT-MAVTE 692
I+HRD E + DFGLAR H D V T Y APE+ M +
Sbjct: 169 IIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMXGY-VATRWYRAPEIMLNWMHYNQ 225
Query: 693 KCDVYSFGVVALEVLMG 709
D++S G + E+L G
Sbjct: 226 TVDIWSVGCIMAELLTG 242
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 86/197 (43%), Gaps = 10/197 (5%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
+G+G YGSV A +G VA+KKL R +++ E RLL ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 575 FCLHNKCMFLIYE-YMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPS 633
+ + + Y+ + L N V+ +L ++ + L Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SAD 145
Query: 634 IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYT-MAVTE 692
I+HRD E + D+GLAR H D T V T Y APE+ M +
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDYGLAR--HTD-DEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 693 KCDVYSFGVVALEVLMG 709
D++S G + E+L G
Sbjct: 203 TVDIWSVGCIMAELLTG 219
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 92/219 (42%), Gaps = 27/219 (12%)
Query: 507 TEDFHIKYCIGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIR 565
+ DF +K +G G YG V A +G++VA+KK+ ++P F E ++L +
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKI--EPFDKPLFALRTLREIKILKHFK 67
Query: 566 HRNIVKLYGFCLHNKC-----MFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMA 620
H NI+ ++ + +++I E M+ L + L +
Sbjct: 68 HENIITIFNIQRPDSFENFNEVYIIQELMQTD-----LHRVISTQMLSDDHIQYFIYQTL 122
Query: 621 HALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNR---------- 670
A+ LH +++HRD + V DFGLAR++ +++
Sbjct: 123 RAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGM 179
Query: 671 TLVVGTYGYIAPELAYTMA-VTEKCDVYSFGVVALEVLM 708
T V T Y APE+ T A + DV+S G + E+ +
Sbjct: 180 TEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL 218
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 89/202 (44%), Gaps = 20/202 (9%)
Query: 516 IGTGGYGSVYRAQLSSGKL-VALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
IG G YG V A + K+ VA+KK+ S E + + E ++L + RH NI+ +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGIND 108
Query: 575 FCL-----HNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYD 629
K ++++ + ME L+ +L+ L + + L Y+H
Sbjct: 109 IIRAPTIEQMKDVYIVQDLME-TDLYKLLKTQ----HLSNDHICYFLYQILRGLKYIH-- 161
Query: 630 CKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNR---TLVVGTYGYIAPELAY 686
+++HRD + + DFGLAR+ PD + T V T Y APE+
Sbjct: 162 -SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 220
Query: 687 -TMAVTEKCDVYSFGVVALEVL 707
+ T+ D++S G + E+L
Sbjct: 221 NSKGYTKSIDIWSVGCILAEML 242
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 89/202 (44%), Gaps = 20/202 (9%)
Query: 516 IGTGGYGSVYRAQLSSGKL-VALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
IG G YG V A + K+ VA+KK+ S E + + E ++L + RH NI+ +
Sbjct: 39 IGEGAYGMVCSAYDNVNKVRVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGIND 96
Query: 575 FCL-----HNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYD 629
K ++++ + ME L+ +L+ L + + L Y+H
Sbjct: 97 IIRAPTIEQMKDVYIVQDLME-TDLYKLLKTQ----HLSNDHICYFLYQILRGLKYIH-- 149
Query: 630 CKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNR---TLVVGTYGYIAPELAY 686
+++HRD + + DFGLAR+ PD + T V T Y APE+
Sbjct: 150 -SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 208
Query: 687 -TMAVTEKCDVYSFGVVALEVL 707
+ T+ D++S G + E+L
Sbjct: 209 NSKGYTKSIDIWSVGCILAEML 230
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 89/202 (44%), Gaps = 20/202 (9%)
Query: 516 IGTGGYGSVYRAQLSSGKL-VALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
IG G YG V A + K+ VA+KK+ S E + + E ++L + RH NI+ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGIND 88
Query: 575 FCL-----HNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYD 629
K ++++ + ME L+ +L+ L + + L Y+H
Sbjct: 89 IIRAPTIEQMKDVYIVQDLME-TDLYKLLKTQ----HLSNDHICYFLYQILRGLKYIH-- 141
Query: 630 CKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNR---TLVVGTYGYIAPELAY 686
+++HRD + + DFGLAR+ PD + T V T Y APE+
Sbjct: 142 -SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 687 -TMAVTEKCDVYSFGVVALEVL 707
+ T+ D++S G + E+L
Sbjct: 201 NSKGYTKSIDIWSVGCILAEML 222
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 96/218 (44%), Gaps = 13/218 (5%)
Query: 503 MIEATEDFHIKYCIGTGGYGSVYRA-QLSSGKLVAL--KKLHRSETEEPAFLESFQTEAR 559
+++ TE IK +G+G +G+VY+ + G+ V + + E P + EA
Sbjct: 45 ILKETEFKKIK-VLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAY 103
Query: 560 LLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSM 619
+++ + + ++ +L G CL + LI + M G L +R + + + +N +
Sbjct: 104 VMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI 160
Query: 620 AHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTY-- 677
A ++YL +VHRD + DFGLA+LL + G
Sbjct: 161 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 217
Query: 678 GYIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHPTD 714
++A E T + DV+S+GV E++ GS P D
Sbjct: 218 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 255
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 89/202 (44%), Gaps = 20/202 (9%)
Query: 516 IGTGGYGSVYRAQLSSGKL-VALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
IG G YG V A + K+ VA+KK+ S E + + E ++L + RH NI+ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGIND 88
Query: 575 FCL-----HNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYD 629
K ++++ + ME L+ +L+ L + + L Y+H
Sbjct: 89 IIRAPTIEQMKDVYIVQDLME-TDLYKLLKTQ----HLSNDHICYFLYQILRGLKYIH-- 141
Query: 630 CKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNR---TLVVGTYGYIAPELAY 686
+++HRD + + DFGLAR+ PD + T V T Y APE+
Sbjct: 142 -SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 687 -TMAVTEKCDVYSFGVVALEVL 707
+ T+ D++S G + E+L
Sbjct: 201 NSKGYTKSIDIWSVGCILAEML 222
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 89/202 (44%), Gaps = 20/202 (9%)
Query: 516 IGTGGYGSVYRAQLSSGKL-VALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
IG G YG V A + K+ VA+KK+ S E + + E ++L + RH NI+ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGIND 90
Query: 575 FCL-----HNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYD 629
K ++++ + ME L+ +L+ L + + L Y+H
Sbjct: 91 IIRAPTIEQMKDVYIVQDLME-TDLYKLLKTQ----HLSNDHICYFLYQILRGLKYIH-- 143
Query: 630 CKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNR---TLVVGTYGYIAPELAY 686
+++HRD + + DFGLAR+ PD + T V T Y APE+
Sbjct: 144 -SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 202
Query: 687 -TMAVTEKCDVYSFGVVALEVL 707
+ T+ D++S G + E+L
Sbjct: 203 NSKGYTKSIDIWSVGCILAEML 224
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 20/202 (9%)
Query: 516 IGTGGYGSVYRAQLSSGKL-VALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
IG G YG V A + K+ VA+KK+ S E + + E ++L + RH NI+ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGIND 88
Query: 575 FCL-----HNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYD 629
K ++++ + ME L+ +L+ L + + L Y+H
Sbjct: 89 IIRAPTIEQMKDVYIVQDLME-TDLYKLLKTQ----HLSNDHICYFLYQILRGLKYIH-- 141
Query: 630 CKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNR---TLVVGTYGYIAPELAY 686
+++HRD + + DFGLAR+ PD + T V T Y APE+
Sbjct: 142 -SANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 687 -TMAVTEKCDVYSFGVVALEVL 707
+ T+ D++S G + E+L
Sbjct: 201 NSKGYTKSIDIWSVGCILAEML 222
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 92/227 (40%), Gaps = 34/227 (14%)
Query: 509 DFHIKYCIGTGGYGSVYRAQLSSGKL---VALKKLHRSETEEPAFLESFQTEARLLSQIR 565
D + IG G +G V +A++ L A+K++ +++ F E +L ++
Sbjct: 16 DIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDH--RDFAGELEVLCKLG 73
Query: 566 HR-NIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRN-------------DVEAVELDWTK 611
H NI+ L G C H ++L EY G+L LR + A L +
Sbjct: 74 HHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQ 133
Query: 612 RVNIVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRT 671
++ +A + YL + +HRD A +ADFGL+R
Sbjct: 134 LLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSR------GQEV 184
Query: 672 LVVGTYG-----YIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHP 712
V T G ++A E T DV+S+GV+ E++ +G P
Sbjct: 185 YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTP 231
>pdb|3M18|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R2.1 In Complex With Hen Egg Lysozyme
Length = 251
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 81/179 (45%), Gaps = 26/179 (14%)
Query: 116 DLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNLKSLFLDNNHL 175
D ++L LQ L L ++ LT LT+L+L NQL +L L +L L NN
Sbjct: 36 DTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANN-- 93
Query: 176 SGPIPSTLYHLNQLATLCLGYNKLVGPVTKEVGNMKNLDRLHLNGNNLTGSIPSTI-GYL 234
QLA+L LG ++ LD+L+L GN L S+PS + L
Sbjct: 94 ------------QLASLPLGV----------FDHLTQLDKLYLGGNQLK-SLPSGVFDRL 130
Query: 235 NLLDELHLSHNRLDGPIPPTIGNLTNLIALDLSSNQLSGLLPREVGNLKYLASLSLNGN 293
L EL L+ N+L LTNL L LS+NQL + L L +++L GN
Sbjct: 131 TKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGN 189
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 66/166 (39%), Gaps = 4/166 (2%)
Query: 35 MPSEIGALSKLEKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTGTIPSEXXXXXXXX 94
+PS I A EKL L L + L++L L+L YN+L T+ +
Sbjct: 29 VPSGIPA--DTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQ-TLSAGVFDDLTEL 85
Query: 95 XXXXXXXXXXXXXPLE-FGNLKDLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLSLNQLSG 153
PL F +L LD+L L GN+L L LT L L L+ NQL
Sbjct: 86 GTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQS 145
Query: 154 RLPQEVGNLKNLKSLFLDNNHLSGPIPSTLYHLNQLATLCLGYNKL 199
L NL++L L N L L +L T+ L N+
Sbjct: 146 IPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQF 191
Score = 35.8 bits (81), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 59/133 (44%), Gaps = 2/133 (1%)
Query: 164 NLKSLFLDNNHLSGPIPSTLYHLNQLATLCLGYNKLVGPVTKEVGNMKNLDRLHLNGNNL 223
+ + L L + L+ +T L +L L L YN+L ++ L L L NN
Sbjct: 36 DTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGL-ANNQ 94
Query: 224 TGSIP-STIGYLNLLDELHLSHNRLDGPIPPTIGNLTNLIALDLSSNQLSGLLPREVGNL 282
S+P +L LD+L+L N+L LT L L L++NQL + L
Sbjct: 95 LASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKL 154
Query: 283 KYLASLSLNGNIL 295
L +LSL+ N L
Sbjct: 155 TNLQTLSLSTNQL 167
Score = 33.1 bits (74), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 59/140 (42%), Gaps = 4/140 (2%)
Query: 111 FGNLKDLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEV-GNLKNLKSLF 169
F L L L L N+L L +LT L L L+ NQL+ LP V +L L L+
Sbjct: 55 FRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLA-SLPLGVFDHLTQLDKLY 113
Query: 170 LDNNHLSGPIPSTLY-HLNQLATLCLGYNKLVGPVTKEVGNMKNLDRLHLNGNNLTGSIP 228
L N L +PS ++ L +L L L N+L + NL L L+ N L
Sbjct: 114 LGGNQLK-SLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPH 172
Query: 229 STIGYLNLLDELHLSHNRLD 248
L L + L N+ D
Sbjct: 173 GAFDRLGKLQTITLFGNQFD 192
Score = 33.1 bits (74), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 32/74 (43%)
Query: 111 FGNLKDLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNLKSLFL 170
F L L +LRL N+L + + LTNL L LS NQL L L+++ L
Sbjct: 127 FDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITL 186
Query: 171 DNNHLSGPIPSTLY 184
N TLY
Sbjct: 187 FGNQFDCSRCETLY 200
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 90/208 (43%), Gaps = 10/208 (4%)
Query: 509 DFHIKYCIGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHR 567
++ I +G G +G V A ++G+ VALK +++ + + E L +RH
Sbjct: 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 73
Query: 568 NIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLH 627
+I+KLY + ++ EY +++ D ++ + + + A+ Y H
Sbjct: 74 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRD----KMSEQEARRFFQQIISAVEYCH 129
Query: 628 YDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPE-LAY 686
+ IVHRD +ADFGL+ ++ D + G+ Y APE ++
Sbjct: 130 ---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIM-TDGNFLKTSCGSPNYAAPEVISG 185
Query: 687 TMAVTEKCDVYSFGVVALEVLMGSHPTD 714
+ + DV+S GV+ +L P D
Sbjct: 186 KLYAGPEVDVWSCGVILYVMLCRRLPFD 213
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 85/197 (43%), Gaps = 10/197 (5%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
+G+G YGSV A +G VA+KKL R +++ E RLL ++H N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 95
Query: 575 FCLHNKCMFLIYE-YMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPS 633
+ + + Y+ + L N V+ +L ++ + L Y+H
Sbjct: 96 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SAD 152
Query: 634 IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYT-MAVTE 692
I+HRD E + DFGLAR + T V T Y APE+ M +
Sbjct: 153 IIHRDLKPSNLAVNEDCELKILDFGLAR---HTADEMTGYVATRWYRAPEIMLNWMHYNQ 209
Query: 693 KCDVYSFGVVALEVLMG 709
D++S G + E+L G
Sbjct: 210 TVDIWSVGCIMAELLTG 226
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 92/219 (42%), Gaps = 27/219 (12%)
Query: 507 TEDFHIKYCIGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIR 565
+ DF +K +G G YG V A +G++VA+KK+ ++P F E ++L +
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKI--EPFDKPLFALRTLREIKILKHFK 67
Query: 566 HRNIVKLYGFCLHNKC-----MFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMA 620
H NI+ ++ + +++I E M+ L + L +
Sbjct: 68 HENIITIFNIQRPDSFENFNEVYIIQELMQTD-----LHRVISTQMLSDDHIQYFIYQTL 122
Query: 621 HALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNR---------- 670
A+ LH +++HRD + V DFGLAR++ +++
Sbjct: 123 RAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGM 179
Query: 671 TLVVGTYGYIAPELAYTMA-VTEKCDVYSFGVVALEVLM 708
T V T Y APE+ T A + DV+S G + E+ +
Sbjct: 180 TEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL 218
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 20/202 (9%)
Query: 516 IGTGGYGSVYRAQLSSGKL-VALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
IG G YG V A + K+ VA+KK+ S E + + E ++L + RH NI+ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKI--SPFEHQTYXQRTLREIKILLRFRHENIIGIND 92
Query: 575 FCL-----HNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYD 629
K ++++ + ME L+ +L+ L + + L Y+H
Sbjct: 93 IIRAPTIEQMKDVYIVQDLME-TDLYKLLKTQ----HLSNDHICYFLYQILRGLKYIH-- 145
Query: 630 CKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNR---TLVVGTYGYIAPELAY 686
+++HRD + + DFGLAR+ PD + T V T Y APE+
Sbjct: 146 -SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 687 -TMAVTEKCDVYSFGVVALEVL 707
+ T+ D++S G + E+L
Sbjct: 205 NSKGYTKSIDIWSVGCILAEML 226
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 90/208 (43%), Gaps = 10/208 (4%)
Query: 509 DFHIKYCIGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHR 567
++ I +G G +G V A ++G+ VALK +++ + + E L +RH
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 64
Query: 568 NIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLH 627
+I+KLY + ++ EY +++ D ++ + + + A+ Y H
Sbjct: 65 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRD----KMSEQEARRFFQQIISAVEYCH 120
Query: 628 YDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPE-LAY 686
+ IVHRD +ADFGL+ ++ D + G+ Y APE ++
Sbjct: 121 ---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIM-TDGNFLKTSCGSPNYAAPEVISG 176
Query: 687 TMAVTEKCDVYSFGVVALEVLMGSHPTD 714
+ + DV+S GV+ +L P D
Sbjct: 177 KLYAGPEVDVWSCGVILYVMLCRRLPFD 204
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 20/202 (9%)
Query: 516 IGTGGYGSVYRAQLSSGKL-VALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
IG G YG V A + K+ VA+KK+ S E + + E ++L + RH NI+ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGIND 92
Query: 575 FCL-----HNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYD 629
K ++++ + ME L+ +L+ L + + L Y+H
Sbjct: 93 IIRAPTIEQMKDVYIVQDLME-TDLYKLLKTQ----HLSNDHICYFLYQILRGLKYIH-- 145
Query: 630 CKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNR---TLVVGTYGYIAPELAY 686
+++HRD + + DFGLAR+ PD + T V T Y APE+
Sbjct: 146 -SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 687 -TMAVTEKCDVYSFGVVALEVL 707
+ T+ D++S G + E+L
Sbjct: 205 NSKGYTKSIDIWSVGCILAEML 226
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 79/177 (44%), Gaps = 14/177 (7%)
Query: 543 SETEEPAFLESFQTEARLLSQIR-HRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRND 601
S E E+ E +L ++ H NI++L N FL+++ M++G LF L
Sbjct: 59 SAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL--- 115
Query: 602 VEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLAR 661
E V L + I++++ + LH K +IVHRD + DFG +
Sbjct: 116 TEKVTLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSC 172
Query: 662 LLHPDSSNRTLVVGTYGYIAPELAYTM------AVTEKCDVYSFGVVALEVLMGSHP 712
L P R+ V GT Y+APE+ ++ D++S GV+ +L GS P
Sbjct: 173 QLDPGEKLRS-VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 85/197 (43%), Gaps = 10/197 (5%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
+G+G YGSV A +G VA+KKL R +++ E RLL ++H N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 95
Query: 575 FCLHNKCMFLIYE-YMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPS 633
+ + + Y+ + L N V+ +L ++ + L Y+H
Sbjct: 96 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SAD 152
Query: 634 IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYT-MAVTE 692
I+HRD E + DFGLAR + T V T Y APE+ M +
Sbjct: 153 IIHRDLKPSNLAVNEDCELKILDFGLAR---HTADEMTGYVATRWYRAPEIMLNWMHYNQ 209
Query: 693 KCDVYSFGVVALEVLMG 709
D++S G + E+L G
Sbjct: 210 TVDIWSVGCIMAELLTG 226
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 88/202 (43%), Gaps = 20/202 (9%)
Query: 516 IGTGGYGSVYRAQLSSGKL-VALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
IG G YG V A + K+ VA+KK+ S E + + E ++L RH NI+ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKI--SPFEHQTYCQRTLREIKILLAFRHENIIGIND 90
Query: 575 FCL-----HNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYD 629
K ++++ + ME L+ +L+ L + + L Y+H
Sbjct: 91 IIRAPTIEQMKDVYIVQDLME-TDLYKLLKTQ----HLSNDHICYFLYQILRGLKYIH-- 143
Query: 630 CKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNR---TLVVGTYGYIAPELAY 686
+++HRD + + DFGLAR+ PD + T V T Y APE+
Sbjct: 144 -SANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 202
Query: 687 -TMAVTEKCDVYSFGVVALEVL 707
+ T+ D++S G + E+L
Sbjct: 203 NSKGYTKSIDIWSVGCILAEML 224
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 90/208 (43%), Gaps = 10/208 (4%)
Query: 509 DFHIKYCIGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHR 567
++ I +G G +G V A ++G+ VALK +++ + + E L +RH
Sbjct: 9 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 68
Query: 568 NIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLH 627
+I+KLY + ++ EY +++ D ++ + + + A+ Y H
Sbjct: 69 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRD----KMSEQEARRFFQQIISAVEYCH 124
Query: 628 YDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPE-LAY 686
+ IVHRD +ADFGL+ ++ D + G+ Y APE ++
Sbjct: 125 ---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIM-TDGNFLKTSCGSPNYAAPEVISG 180
Query: 687 TMAVTEKCDVYSFGVVALEVLMGSHPTD 714
+ + DV+S GV+ +L P D
Sbjct: 181 KLYAGPEVDVWSCGVILYVMLCRRLPFD 208
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 78/177 (44%), Gaps = 14/177 (7%)
Query: 543 SETEEPAFLESFQTEARLLSQIR-HRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRND 601
S E E+ E +L ++ H NI++L N FL+++ M++G LF L
Sbjct: 46 SAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL--- 102
Query: 602 VEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLAR 661
E V L + I++++ + LH K +IVHRD + DFG +
Sbjct: 103 TEKVTLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSC 159
Query: 662 LLHPDSSNRTLVVGTYGYIAPELAYTM------AVTEKCDVYSFGVVALEVLMGSHP 712
L P R V GT Y+APE+ ++ D++S GV+ +L GS P
Sbjct: 160 QLDPGEKLRE-VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 215
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 90/208 (43%), Gaps = 10/208 (4%)
Query: 509 DFHIKYCIGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHR 567
++ I +G G +G V A ++G+ VALK +++ + + E L +RH
Sbjct: 15 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 74
Query: 568 NIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLH 627
+I+KLY + ++ EY +++ D ++ + + + A+ Y H
Sbjct: 75 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRD----KMSEQEARRFFQQIISAVEYCH 130
Query: 628 YDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPE-LAY 686
+ IVHRD +ADFGL+ ++ D + G+ Y APE ++
Sbjct: 131 ---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIM-TDGNFLKTSCGSPNYAAPEVISG 186
Query: 687 TMAVTEKCDVYSFGVVALEVLMGSHPTD 714
+ + DV+S GV+ +L P D
Sbjct: 187 KLYAGPEVDVWSCGVILYVMLCRRLPFD 214
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 93/224 (41%), Gaps = 45/224 (20%)
Query: 516 IGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARL--LSQIRHRNIVKLY 573
IG G YG+VY+ L + VA+K A ++F E + + + H NI +
Sbjct: 21 IGRGRYGAVYKGSLDE-RPVAVKVFSF------ANRQNFINEKNIYRVPLMEHDNIAR-- 71
Query: 574 GFCLHNKCM--------FLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSY 625
F + ++ + L+ EY GSL L DW + S+ L+Y
Sbjct: 72 -FIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS----DWVSSCRLAHSVTRGLAY 126
Query: 626 LHYDC------KPSIVHRDXXXXXXXXXXXXEAFVADFGLA------RLLHPDSSNRTLV 673
LH + KP+I HRD ++DFGL+ RL+ P + +
Sbjct: 127 LHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAI 186
Query: 674 --VGTYGYIAPE-------LAYTMAVTEKCDVYSFGVVALEVLM 708
VGT Y+APE L + ++ D+Y+ G++ E+ M
Sbjct: 187 SEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFM 230
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 85/197 (43%), Gaps = 10/197 (5%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
+G+G YGSV A +G VA+KKL R +++ E RLL ++H N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 95
Query: 575 FCLHNKCMFLIYE-YMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPS 633
+ + + Y+ + L N V+ +L ++ + L Y+H
Sbjct: 96 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SAD 152
Query: 634 IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYT-MAVTE 692
I+HRD E + DFGLAR + T V T Y APE+ M +
Sbjct: 153 IIHRDLKPSNLAVNEDCELKILDFGLAR---HTADEMTGYVATRWYRAPEIMLNWMHYNQ 209
Query: 693 KCDVYSFGVVALEVLMG 709
D++S G + E+L G
Sbjct: 210 TVDIWSVGCIMAELLTG 226
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 96/205 (46%), Gaps = 26/205 (12%)
Query: 516 IGTGGYGSVYRAQ-LSSGKLVALKKL---HRSETEEPAFLESFQTEARLLSQIRHRNIVK 571
+G G + +VY+A+ ++ ++VA+KK+ HRSE ++ + E +LL ++ H NI+
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKD-GINRTALREIKLLQELSHPNIIG 76
Query: 572 LYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSY------ 625
L H + L++++ME D+E + K ++V + +H +Y
Sbjct: 77 LLDAFGHKSNISLVFDFME---------TDLEVI----IKDNSLVLTPSHIKAYMLMTLQ 123
Query: 626 -LHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPEL 684
L Y + I+HRD +ADFGLA+ + V T Y APEL
Sbjct: 124 GLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPEL 183
Query: 685 AYTMAVTE-KCDVYSFGVVALEVLM 708
+ + D+++ G + E+L+
Sbjct: 184 LFGARMYGVGVDMWAVGCILAELLL 208
>pdb|3M19|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
pdb|3M19|B Chain B, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
Length = 251
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 81/179 (45%), Gaps = 26/179 (14%)
Query: 116 DLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNLKSLFLDNNHL 175
D ++L LQ L L ++ LT LT+L+L NQL +L L +L L NN
Sbjct: 36 DTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANN-- 93
Query: 176 SGPIPSTLYHLNQLATLCLGYNKLVGPVTKEVGNMKNLDRLHLNGNNLTGSIPSTI-GYL 234
QLA+L LG ++ LD+L+L GN L S+PS + L
Sbjct: 94 ------------QLASLPLGV----------FDHLTQLDKLYLGGNQLK-SLPSGVFDRL 130
Query: 235 NLLDELHLSHNRLDGPIPPTIGNLTNLIALDLSSNQLSGLLPREVGNLKYLASLSLNGN 293
L EL L+ N+L LTNL L LS+NQL + L L +++L GN
Sbjct: 131 TKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGN 189
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 66/166 (39%), Gaps = 4/166 (2%)
Query: 35 MPSEIGALSKLEKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTGTIPSEXXXXXXXX 94
+PS I A EKL L L + L++L L+L YN+L T+ +
Sbjct: 29 VPSGIPA--DTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQ-TLSAGVFDDLTEL 85
Query: 95 XXXXXXXXXXXXXPLE-FGNLKDLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLSLNQLSG 153
PL F +L LD+L L GN+L L LT L L L+ NQL
Sbjct: 86 GTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQS 145
Query: 154 RLPQEVGNLKNLKSLFLDNNHLSGPIPSTLYHLNQLATLCLGYNKL 199
L NL++L L N L L +L T+ L N+
Sbjct: 146 IPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQF 191
Score = 35.8 bits (81), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 59/133 (44%), Gaps = 2/133 (1%)
Query: 164 NLKSLFLDNNHLSGPIPSTLYHLNQLATLCLGYNKLVGPVTKEVGNMKNLDRLHLNGNNL 223
+ + L L + L+ +T L +L L L YN+L ++ L L L NN
Sbjct: 36 DTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGL-ANNQ 94
Query: 224 TGSIP-STIGYLNLLDELHLSHNRLDGPIPPTIGNLTNLIALDLSSNQLSGLLPREVGNL 282
S+P +L LD+L+L N+L LT L L L++NQL + L
Sbjct: 95 LASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKL 154
Query: 283 KYLASLSLNGNIL 295
L +LSL+ N L
Sbjct: 155 TNLQTLSLSTNQL 167
Score = 33.1 bits (74), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 59/140 (42%), Gaps = 4/140 (2%)
Query: 111 FGNLKDLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEV-GNLKNLKSLF 169
F L L L L N+L L +LT L L L+ NQL+ LP V +L L L+
Sbjct: 55 FRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLA-SLPLGVFDHLTQLDKLY 113
Query: 170 LDNNHLSGPIPSTLY-HLNQLATLCLGYNKLVGPVTKEVGNMKNLDRLHLNGNNLTGSIP 228
L N L +PS ++ L +L L L N+L + NL L L+ N L
Sbjct: 114 LGGNQLK-SLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPH 172
Query: 229 STIGYLNLLDELHLSHNRLD 248
L L + L N+ D
Sbjct: 173 GAFDRLGKLQTITLFGNQFD 192
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 89/202 (44%), Gaps = 20/202 (9%)
Query: 516 IGTGGYGSVYRAQLSSGKL-VALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
IG G YG V A + K+ VA+KK+ S E + + E ++L + RH NI+ +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGIND 86
Query: 575 FCL-----HNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYD 629
K ++++ + ME L+ +L+ L + + L Y+H
Sbjct: 87 IIRAPTIEQMKDVYIVQDLME-TDLYKLLKTQ----HLSNDHICYFLYQILRGLKYIH-- 139
Query: 630 CKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNR---TLVVGTYGYIAPELAY 686
+++HRD + + DFGLAR+ PD + T V T Y APE+
Sbjct: 140 -SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 198
Query: 687 -TMAVTEKCDVYSFGVVALEVL 707
+ T+ D++S G + E+L
Sbjct: 199 NSKGYTKSIDIWSVGCILAEML 220
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 89/202 (44%), Gaps = 20/202 (9%)
Query: 516 IGTGGYGSVYRAQLSSGKL-VALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
IG G YG V A + K+ VA+KK+ S E + + E ++L + RH NI+ +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGIND 86
Query: 575 FCL-----HNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYD 629
K ++++ + ME L+ +L+ L + + L Y+H
Sbjct: 87 IIRAPTIEQMKDVYIVQDLME-TDLYKLLKTQ----HLSNDHICYFLYQILRGLKYIH-- 139
Query: 630 CKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNR---TLVVGTYGYIAPELAY 686
+++HRD + + DFGLAR+ PD + T V T Y APE+
Sbjct: 140 -SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 198
Query: 687 -TMAVTEKCDVYSFGVVALEVL 707
+ T+ D++S G + E+L
Sbjct: 199 NSKGYTKSIDIWSVGCILAEML 220
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 89/202 (44%), Gaps = 20/202 (9%)
Query: 516 IGTGGYGSVYRAQLSSGKL-VALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
IG G YG V A + K+ VA+KK+ S E + + E ++L + RH NI+ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGIND 93
Query: 575 FCL-----HNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYD 629
K ++++ + ME L+ +L+ L + + L Y+H
Sbjct: 94 IIRAPTIEQMKDVYIVQDLME-TDLYKLLKTQ----HLSNDHICYFLYQILRGLKYIH-- 146
Query: 630 CKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNR---TLVVGTYGYIAPELAY 686
+++HRD + + DFGLAR+ PD + T V T Y APE+
Sbjct: 147 -SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 205
Query: 687 -TMAVTEKCDVYSFGVVALEVL 707
+ T+ D++S G + E+L
Sbjct: 206 NSKGYTKSIDIWSVGCILAEML 227
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 89/202 (44%), Gaps = 20/202 (9%)
Query: 516 IGTGGYGSVYRAQLSSGKL-VALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
IG G YG V A + K+ VA+KK+ S E + + E ++L + RH NI+ +
Sbjct: 37 IGEGAYGMVCSAYDNLNKVRVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGIND 94
Query: 575 FCL-----HNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYD 629
K ++++ + ME L+ +L+ L + + L Y+H
Sbjct: 95 IIRAPTIEQMKDVYIVQDLME-TDLYKLLKTQ----HLSNDHICYFLYQILRGLKYIH-- 147
Query: 630 CKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNR---TLVVGTYGYIAPELAY 686
+++HRD + + DFGLAR+ PD + T V T Y APE+
Sbjct: 148 -SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 206
Query: 687 -TMAVTEKCDVYSFGVVALEVL 707
+ T+ D++S G + E+L
Sbjct: 207 NSKGYTKSIDIWSVGCILAEML 228
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 89/202 (44%), Gaps = 20/202 (9%)
Query: 516 IGTGGYGSVYRAQLSSGKL-VALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
IG G YG V A + K+ VA+KK+ S E + + E ++L + RH NI+ +
Sbjct: 28 IGEGAYGMVCSAYDNLNKVRVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGIND 85
Query: 575 FCL-----HNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYD 629
K ++++ + ME L+ +L+ L + + L Y+H
Sbjct: 86 IIRAPTIEQMKDVYIVQDLME-TDLYKLLKTQ----HLSNDHICYFLYQILRGLKYIH-- 138
Query: 630 CKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNR---TLVVGTYGYIAPELAY 686
+++HRD + + DFGLAR+ PD + T V T Y APE+
Sbjct: 139 -SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 197
Query: 687 -TMAVTEKCDVYSFGVVALEVL 707
+ T+ D++S G + E+L
Sbjct: 198 NSKGYTKSIDIWSVGCILAEML 219
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 89/202 (44%), Gaps = 20/202 (9%)
Query: 516 IGTGGYGSVYRAQLSSGKL-VALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
IG G YG V A + K+ VA+KK+ S E + + E ++L + RH NI+ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGIND 92
Query: 575 FCL-----HNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYD 629
K ++++ + ME L+ +L+ L + + L Y+H
Sbjct: 93 IIRAPTIEQMKDVYIVQDLME-TDLYKLLKTQ----HLSNDHICYFLYQILRGLKYIH-- 145
Query: 630 CKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNR---TLVVGTYGYIAPELAY 686
+++HRD + + DFGLAR+ PD + T V T Y APE+
Sbjct: 146 -SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 687 -TMAVTEKCDVYSFGVVALEVL 707
+ T+ D++S G + E+L
Sbjct: 205 NSKGYTKSIDIWSVGCILAEML 226
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 98/220 (44%), Gaps = 17/220 (7%)
Query: 503 MIEATEDFHIKYCIGTGGYGSVYRA-QLSSGKLV----ALKKLHRSETEEPAFLESFQTE 557
+++ TE IK +G+G +G+VY+ + G+ V A+K+L E P + E
Sbjct: 13 ILKETEFKKIK-VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANKEILDE 69
Query: 558 ARLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVK 617
A +++ + + ++ +L G CL + LI + M G L +R + + + +N
Sbjct: 70 AYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYL--LNWCV 126
Query: 618 SMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTY 677
+A ++YL +VHRD + DFG A+LL + G
Sbjct: 127 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV 183
Query: 678 --GYIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHPTD 714
++A E T + DV+S+GV E++ GS P D
Sbjct: 184 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 92/202 (45%), Gaps = 22/202 (10%)
Query: 516 IGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
+G G Y +VY+ + + LVALK++ R E EE A + + E LL ++H NIV L+
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEI-RLEHEEGAPCTAIR-EVSLLKDLKHANIVTLHD 67
Query: 575 FCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNI--VK----SMAHALSYLHY 628
K + L++EY+++ D++ D +N+ VK + L+Y H
Sbjct: 68 IIHTEKSLTLVFEYLDK---------DLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCH- 117
Query: 629 DCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPE-LAYT 687
+ ++HRD E +ADFGLAR + V T Y P+ L +
Sbjct: 118 --RQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGS 175
Query: 688 MAVTEKCDVYSFGVVALEVLMG 709
+ + D++ G + E+ G
Sbjct: 176 TDYSTQIDMWGVGCIFYEMATG 197
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 98/220 (44%), Gaps = 17/220 (7%)
Query: 503 MIEATEDFHIKYCIGTGGYGSVYRA-QLSSGKLV----ALKKLHRSETEEPAFLESFQTE 557
+++ TE IK +G+G +G+VY+ + G+ V A+K+L E P + E
Sbjct: 13 ILKETEFKKIK-VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANKEILDE 69
Query: 558 ARLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVK 617
A +++ + + ++ +L G CL + LI + M G L +R + + + +N
Sbjct: 70 AYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYL--LNWCV 126
Query: 618 SMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTY 677
+A ++YL +VHRD + DFG A+LL + G
Sbjct: 127 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV 183
Query: 678 --GYIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHPTD 714
++A E T + DV+S+GV E++ GS P D
Sbjct: 184 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|4FMZ|A Chain A, Crystal Structure Of An Internalin (Inlf) From Listeria
Monocytogenes Str. 4b F2365 At 1.91 A Resolution
pdb|4FMZ|B Chain B, Crystal Structure Of An Internalin (Inlf) From Listeria
Monocytogenes Str. 4b F2365 At 1.91 A Resolution
Length = 347
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 94/181 (51%), Gaps = 22/181 (12%)
Query: 111 FGNLKDLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNLKSLFL 170
NL DL L L N+++ + P + +LT+L Y +NQ++ P V N L SL +
Sbjct: 173 IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANXTRLNSLKI 228
Query: 171 DNNHLSGPIPSTLYHLNQLATLCLGYNKLVGPVTKEVGNMKNLDRLH-LN-GNNLTGSIP 228
NN ++ P L +L+QL L +G N++ ++ +K+L +L LN G+N I
Sbjct: 229 GNNKITDLSP--LANLSQLTWLEIGTNQI-----SDINAVKDLTKLKXLNVGSNQISDI- 280
Query: 229 STIGYLNLLDELHLSHNRLDGPIPPTIGNLTNLIALDLSSNQLSGLLPREVGNLKYLASL 288
S + L+ L+ L L++N+L IG LTNL L LS N ++ + P LASL
Sbjct: 281 SVLNNLSQLNSLFLNNNQLGNEDXEVIGGLTNLTTLFLSQNHITDIRP--------LASL 332
Query: 289 S 289
S
Sbjct: 333 S 333
Score = 35.8 bits (81), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 79/163 (48%), Gaps = 33/163 (20%)
Query: 114 LKDLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNLKSLFLDNN 173
L +L+ L L GN++ + P + NL LT L + N+++ + NL NL+ L+L+ +
Sbjct: 65 LTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITDI--SALQNLTNLRELYLNED 120
Query: 174 HLSGPIPSTLYHLNQLATLCLGYNKLVGPVTKEVGNMKNLDRLHLNGNNLTGSIPSTIGY 233
++S P L +L + +L LG N N+ +L L N TG
Sbjct: 121 NISDISP--LANLTKXYSLNLGANH----------NLSDLSPLS----NXTG-------- 156
Query: 234 LNLLDELHLSHNRLDGPIPPTIGNLTNLIALDLSSNQLSGLLP 276
L+ L ++ +++ P I NLT+L +L L+ NQ+ + P
Sbjct: 157 ---LNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDISP 194
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 98/220 (44%), Gaps = 17/220 (7%)
Query: 503 MIEATEDFHIKYCIGTGGYGSVYRA-QLSSGKLV----ALKKLHRSETEEPAFLESFQTE 557
+++ TE IK +G+G +G+VY+ + G+ V A+K+L E P + E
Sbjct: 13 ILKETEFKKIK-VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANKEILDE 69
Query: 558 ARLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVK 617
A +++ + + ++ +L G CL + LI + M G L +R + + + +N
Sbjct: 70 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL--LNWCV 126
Query: 618 SMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTY 677
+A ++YL +VHRD + DFG A+LL + G
Sbjct: 127 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV 183
Query: 678 --GYIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHPTD 714
++A E T + DV+S+GV E++ GS P D
Sbjct: 184 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 89/202 (44%), Gaps = 20/202 (9%)
Query: 516 IGTGGYGSVYRAQLSSGKL-VALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
IG G YG V A + K+ VA+KK+ S E + + E ++L + RH NI+ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGIND 92
Query: 575 FCL-----HNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYD 629
K ++++ + ME L+ +L+ L + + L Y+H
Sbjct: 93 IIRAPTIEQMKDVYIVQDLME-TDLYKLLK----CQHLSNDHICYFLYQILRGLKYIH-- 145
Query: 630 CKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNR---TLVVGTYGYIAPELAY 686
+++HRD + + DFGLAR+ PD + T V T Y APE+
Sbjct: 146 -SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 687 -TMAVTEKCDVYSFGVVALEVL 707
+ T+ D++S G + E+L
Sbjct: 205 NSKGYTKSIDIWSVGCILAEML 226
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 98/220 (44%), Gaps = 17/220 (7%)
Query: 503 MIEATEDFHIKYCIGTGGYGSVYRA-QLSSGKLV----ALKKLHRSETEEPAFLESFQTE 557
+++ TE IK +G+G +G+VY+ + G+ V A+K+L E P + E
Sbjct: 15 ILKETEFKKIK-VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANKEILDE 71
Query: 558 ARLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVK 617
A +++ + + ++ +L G CL + LI + M G L +R + + + +N
Sbjct: 72 AYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYL--LNWCV 128
Query: 618 SMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTY 677
+A ++YL +VHRD + DFG A+LL + G
Sbjct: 129 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV 185
Query: 678 --GYIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHPTD 714
++A E T + DV+S+GV E++ GS P D
Sbjct: 186 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 225
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 88/202 (43%), Gaps = 20/202 (9%)
Query: 516 IGTGGYGSVYRAQLSSGKL-VALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
IG G YG V A + K+ VA+KK+ S E + + E ++L RH NI+ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKI--SPFEHQTYCQRTLREIKILLAFRHENIIGIND 90
Query: 575 FCL-----HNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYD 629
K ++++ + ME L+ +L+ L + + L Y+H
Sbjct: 91 IIRAPTIEQMKDVYIVQDLME-TDLYKLLKTQ----HLSNDHICYFLYQILRGLKYIH-- 143
Query: 630 CKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNR---TLVVGTYGYIAPELAY 686
+++HRD + + DFGLAR+ PD + T V T Y APE+
Sbjct: 144 -SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 202
Query: 687 -TMAVTEKCDVYSFGVVALEVL 707
+ T+ D++S G + E+L
Sbjct: 203 NSKGYTKSIDIWSVGCILAEML 224
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 90/221 (40%), Gaps = 17/221 (7%)
Query: 495 DGRITFEEMIEATEDFHIKYCIGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLES 553
D R+T E F +G G +G V + ++G+ A+K L + +
Sbjct: 4 DPRVTMNE-------FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAH 56
Query: 554 FQTEARLLSQIRHRNIVKL-YGFCLHNKCMFLIYEYMERGSLFCVL-RNDVEAVELDWTK 611
TE R+L RH + L Y F H++ F++ EY G LF L R V + +
Sbjct: 57 TLTENRVLQNSRHPFLTALKYSFQTHDRLCFVM-EYANGGELFFHLSRERVFSEDRARFY 115
Query: 612 RVNIVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRT 671
IV AL YLH + ++V+RD + DFGL + D +
Sbjct: 116 GAEIVS----ALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMK 169
Query: 672 LVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHP 712
GT Y+APE+ D + GVV E++ G P
Sbjct: 170 XFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 210
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 98/220 (44%), Gaps = 17/220 (7%)
Query: 503 MIEATEDFHIKYCIGTGGYGSVYRA-QLSSGKLV----ALKKLHRSETEEPAFLESFQTE 557
+++ TE IK +G+G +G+VY+ + G+ V A+K+L E P + E
Sbjct: 18 ILKETEFKKIK-VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANKEILDE 74
Query: 558 ARLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVK 617
A +++ + + ++ +L G CL + LI + M G L +R + + + +N
Sbjct: 75 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL--LNWCV 131
Query: 618 SMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTY 677
+A ++YL +VHRD + DFG A+LL + G
Sbjct: 132 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV 188
Query: 678 --GYIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHPTD 714
++A E T + DV+S+GV E++ GS P D
Sbjct: 189 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 89/202 (44%), Gaps = 20/202 (9%)
Query: 516 IGTGGYGSVYRAQLSSGKL-VALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
IG G YG V A + K+ VA+KK+ S E + + E ++L + RH NI+ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGIND 92
Query: 575 FCL-----HNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYD 629
K ++++ + ME L+ +L+ L + + L Y+H
Sbjct: 93 IIRAPTIEQMKDVYIVQDLME-TDLYKLLKTQ----HLSNDHICYFLYQILRGLKYIH-- 145
Query: 630 CKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLV---VGTYGYIAPELAY 686
+++HRD + + DFGLAR+ PD + + V T Y APE+
Sbjct: 146 -SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIML 204
Query: 687 -TMAVTEKCDVYSFGVVALEVL 707
+ T+ D++S G + E+L
Sbjct: 205 NSKGYTKSIDIWSVGCILAEML 226
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 89/202 (44%), Gaps = 20/202 (9%)
Query: 516 IGTGGYGSVYRAQLSSGKL-VALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
IG G YG V A + K+ VA+KK+ S E + + E ++L + RH NI+ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGIND 93
Query: 575 FCL-----HNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYD 629
K ++++ + ME L+ +L+ L + + L Y+H
Sbjct: 94 IIRAPTIEQMKDVYIVQDLME-TDLYKLLKTQ----HLSNDHICYFLYQILRGLKYIH-- 146
Query: 630 CKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLV---VGTYGYIAPELAY 686
+++HRD + + DFGLAR+ PD + + V T Y APE+
Sbjct: 147 -SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIML 205
Query: 687 -TMAVTEKCDVYSFGVVALEVL 707
+ T+ D++S G + E+L
Sbjct: 206 NSKGYTKSIDIWSVGCILAEML 227
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 85/207 (41%), Gaps = 10/207 (4%)
Query: 509 DFHIKYCIGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHR 567
+F +G G +G V + ++G+ A+K L + + TE R+L RH
Sbjct: 152 EFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHP 211
Query: 568 NIVKL-YGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKS-MAHALSY 625
+ L Y F H++ F++ EY G LF L + E R + + AL Y
Sbjct: 212 FLTALKYSFQTHDRLCFVM-EYANGGELFFHLSRERVFSE----DRARFYGAEIVSALDY 266
Query: 626 LHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELA 685
LH + ++V+RD + DFGL + D + GT Y+APE+
Sbjct: 267 LH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVL 324
Query: 686 YTMAVTEKCDVYSFGVVALEVLMGSHP 712
D + GVV E++ G P
Sbjct: 325 EDNDYGRAVDWWGLGVVMYEMMCGRLP 351
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 85/207 (41%), Gaps = 10/207 (4%)
Query: 509 DFHIKYCIGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHR 567
+F +G G +G V + ++G+ A+K L + + TE R+L RH
Sbjct: 149 EFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHP 208
Query: 568 NIVKL-YGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKS-MAHALSY 625
+ L Y F H++ F++ EY G LF L + E R + + AL Y
Sbjct: 209 FLTALKYSFQTHDRLCFVM-EYANGGELFFHLSRERVFSE----DRARFYGAEIVSALDY 263
Query: 626 LHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELA 685
LH + ++V+RD + DFGL + D + GT Y+APE+
Sbjct: 264 LH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVL 321
Query: 686 YTMAVTEKCDVYSFGVVALEVLMGSHP 712
D + GVV E++ G P
Sbjct: 322 EDNDYGRAVDWWGLGVVMYEMMCGRLP 348
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 98/220 (44%), Gaps = 17/220 (7%)
Query: 503 MIEATEDFHIKYCIGTGGYGSVYRA-QLSSGKLV----ALKKLHRSETEEPAFLESFQTE 557
+++ TE IK + +G +G+VY+ + G+ V A+K+L E P + E
Sbjct: 18 ILKETEFKKIK-VLSSGAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANKEILDE 74
Query: 558 ARLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVK 617
A +++ + + ++ +L G CL + LI + M G L +R + + + +N
Sbjct: 75 AYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYL--LNWCV 131
Query: 618 SMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTY 677
+A ++YL +VHRD + DFGLA+LL + G
Sbjct: 132 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 188
Query: 678 --GYIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHPTD 714
++A E T + DV+S+GV E++ GS P D
Sbjct: 189 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 98/220 (44%), Gaps = 17/220 (7%)
Query: 503 MIEATEDFHIKYCIGTGGYGSVYRA-QLSSGK----LVALKKLHRSETEEPAFLESFQTE 557
+++ TE +K +G+G +G+VY+ + G+ VA+K L E P + E
Sbjct: 13 ILKETELRKVK-VLGSGAFGTVYKGIWIPDGENVKIPVAIKVLR--ENTSPKANKEILDE 69
Query: 558 ARLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVK 617
A +++ + + +L G CL + L+ + M G L +R + L +N
Sbjct: 70 AYVMAGVGSPYVSRLLGICLTSTVQ-LVTQLMPYGCLLDHVREN--RGRLGSQDLLNWCM 126
Query: 618 SMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTY 677
+A +SYL D + +VHRD + DFGLARLL D + G
Sbjct: 127 QIAKGMSYLE-DVR--LVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKV 183
Query: 678 --GYIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHPTD 714
++A E T + DV+S+GV E++ G+ P D
Sbjct: 184 PIKWMALESILRRRFTHQSDVWSYGVTVWELMTFGAKPYD 223
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 98/220 (44%), Gaps = 17/220 (7%)
Query: 503 MIEATEDFHIKYCIGTGGYGSVYRA-QLSSGKLV----ALKKLHRSETEEPAFLESFQTE 557
+++ TE IK +G+G +G+VY+ + G+ V A+K+L E P + E
Sbjct: 11 ILKETEFKKIK-VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANKEILDE 67
Query: 558 ARLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVK 617
A +++ + + ++ +L G CL + LI + M G L +R + + + +N
Sbjct: 68 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL--LNWCV 124
Query: 618 SMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTY 677
+A ++YL +VHRD + DFG A+LL + G
Sbjct: 125 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV 181
Query: 678 --GYIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHPTD 714
++A E T + DV+S+GV E++ GS P D
Sbjct: 182 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 86/208 (41%), Gaps = 8/208 (3%)
Query: 509 DFHIKYCIGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHR 567
DF+ +G G +G V A + + +L A+K L + + +E E R+L+ +
Sbjct: 20 DFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKP 79
Query: 568 NIVKLYGFCLHN-KCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYL 626
+ C ++ + EY+ G L ++ + + + V ++ L +L
Sbjct: 80 PFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQ---QVGKFKEPQAVFYAAEISIGLFFL 136
Query: 627 HYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAY 686
H K I++RD +ADFG+ + D GT YIAPE+
Sbjct: 137 H---KRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEIIA 193
Query: 687 TMAVTEKCDVYSFGVVALEVLMGSHPTD 714
+ D +++GV+ E+L G P D
Sbjct: 194 YQPYGKSVDWWAYGVLLYEMLAGQPPFD 221
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 98/220 (44%), Gaps = 17/220 (7%)
Query: 503 MIEATEDFHIKYCIGTGGYGSVYRA-QLSSGKLV----ALKKLHRSETEEPAFLESFQTE 557
+++ TE IK + +G +G+VY+ + G+ V A+K+L E P + E
Sbjct: 11 ILKETEFKKIK-VLSSGAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANKEILDE 67
Query: 558 ARLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVK 617
A +++ + + ++ +L G CL + LI + M G L +R + + + +N
Sbjct: 68 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL--LNWCV 124
Query: 618 SMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTY 677
+A ++YL +VHRD + DFGLA+LL + G
Sbjct: 125 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 181
Query: 678 --GYIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHPTD 714
++A E T + DV+S+GV E++ GS P D
Sbjct: 182 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 84/200 (42%), Gaps = 10/200 (5%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKL-Y 573
+G G +G V + ++G+ A+K L + + TE R+L RH + L Y
Sbjct: 16 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKY 75
Query: 574 GFCLHNKCMFLIYEYMERGSLFCVL-RNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKP 632
F H++ F++ EY G LF L R V + + IV AL YLH +
Sbjct: 76 SFQTHDRLCFVM-EYANGGELFFHLSRERVFSEDRARFYGAEIVS----ALDYLH--SEK 128
Query: 633 SIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYTMAVTE 692
++V+RD + DFGL + D + GT Y+APE+
Sbjct: 129 NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGR 188
Query: 693 KCDVYSFGVVALEVLMGSHP 712
D + GVV E++ G P
Sbjct: 189 AVDWWGLGVVMYEMMCGRLP 208
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 89/205 (43%), Gaps = 17/205 (8%)
Query: 516 IGTGGYGSVYRAQLSSGKL---VALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKL 572
+G G +GSV + K VA+K L + E A E EA+++ Q+ + IV+L
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVL--KQGTEKADTEEMMREAQIMHQLDNPYIVRL 75
Query: 573 YGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSY-LHYDCK 631
G C + + L+ E G L L E + V+ V + H +S + Y +
Sbjct: 76 IGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIP------VSNVAELLHQVSMGMKYLEE 128
Query: 632 PSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTL-VVGTY--GYIAPELAYTM 688
+ VHRD A ++DFGL++ L D S T G + + APE
Sbjct: 129 KNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFR 188
Query: 689 AVTEKCDVYSFGVVALEVL-MGSHP 712
+ + DV+S+GV E L G P
Sbjct: 189 KFSSRSDVWSYGVTMWEALSYGQKP 213
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 78/177 (44%), Gaps = 14/177 (7%)
Query: 543 SETEEPAFLESFQTEARLLSQIR-HRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRND 601
S E E+ E +L ++ H NI++L N FL+++ M++G LF L
Sbjct: 59 SAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL--- 115
Query: 602 VEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLAR 661
E V L + I++++ + LH K +IVHRD + DFG +
Sbjct: 116 TEKVTLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSC 172
Query: 662 LLHPDSSNRTLVVGTYGYIAPELAYTM------AVTEKCDVYSFGVVALEVLMGSHP 712
L P R V GT Y+APE+ ++ D++S GV+ +L GS P
Sbjct: 173 QLDPGEKLRE-VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 98/220 (44%), Gaps = 17/220 (7%)
Query: 503 MIEATEDFHIKYCIGTGGYGSVYRA-QLSSGKLV----ALKKLHRSETEEPAFLESFQTE 557
+++ TE IK + +G +G+VY+ + G+ V A+K+L E P + E
Sbjct: 18 ILKETEFKKIK-VLSSGAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANKEILDE 74
Query: 558 ARLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVK 617
A +++ + + ++ +L G CL + LI + M G L +R + + + +N
Sbjct: 75 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL--LNWCV 131
Query: 618 SMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTY 677
+A ++YL +VHRD + DFGLA+LL + G
Sbjct: 132 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 188
Query: 678 --GYIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHPTD 714
++A E T + DV+S+GV E++ GS P D
Sbjct: 189 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 96/216 (44%), Gaps = 23/216 (10%)
Query: 507 TEDFHIKYCIGTGGYGSVYRA------QLSSGKLVALKKLHRSETEEPAFLESFQTEARL 560
T+++ + +G G + V R Q + K++ KKL + ++ + EAR+
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQK------LEREARI 56
Query: 561 LSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVEL-DWTKRVNIVKSM 619
++H NIV+L+ +L+++ + G LF D+ A E + ++ +
Sbjct: 57 CRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELF----EDIVAREYYSEADASHCIQQI 112
Query: 620 AHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAF---VADFGLARLLHPDSSNRTLVVGT 676
++++ H + IVHRD + +ADFGLA + D GT
Sbjct: 113 LESVNHCHLN---GIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGT 169
Query: 677 YGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHP 712
GY++PE+ + D+++ GV+ +L+G P
Sbjct: 170 PGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPP 205
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 89/212 (41%), Gaps = 18/212 (8%)
Query: 505 EATEDFHIKYCIGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQ 563
E E + +G+G YGSV + + SG +A+KKL R +++ E RLL
Sbjct: 48 EVPERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYR-ELRLLKH 106
Query: 564 IRHRNIVKLYG-FCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHA 622
++H N++ L F Y+ + L N V+ +L ++ +
Sbjct: 107 MKHENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 166
Query: 623 LSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAP 682
L Y+H I+HRD E + DFGLAR H D T V T Y AP
Sbjct: 167 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTD-DEMTGYVATRWYRAP 220
Query: 683 E-----LAYTMAVTEKCDVYSFGVVALEVLMG 709
E + Y M V D++S G + E+L G
Sbjct: 221 EIMLNWMHYNMTV----DIWSVGCIMAELLTG 248
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 92/219 (42%), Gaps = 27/219 (12%)
Query: 507 TEDFHIKYCIGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIR 565
+ DF +K +G G YG V A +G++VA+KK+ ++P F E ++L +
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKI--EPFDKPLFALRTLREIKILKHFK 67
Query: 566 HRNIVKLYGFCLHNKC-----MFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMA 620
H NI+ ++ + +++I E M+ L + L +
Sbjct: 68 HENIITIFNIQRPDSFENFNEVYIIQELMQTD-----LHRVISTQMLSDDHIQYFIYQTL 122
Query: 621 HALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRT--------- 671
A+ LH +++HRD + V DFGLAR++ +++ +
Sbjct: 123 RAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGM 179
Query: 672 -LVVGTYGYIAPELAYTMA-VTEKCDVYSFGVVALEVLM 708
V T Y APE+ T A + DV+S G + E+ +
Sbjct: 180 VEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL 218
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 84/200 (42%), Gaps = 10/200 (5%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKL-Y 573
+G G +G V + ++G+ A+K L + + TE R+L RH + L Y
Sbjct: 17 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKY 76
Query: 574 GFCLHNKCMFLIYEYMERGSLFCVL-RNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKP 632
F H++ F++ EY G LF L R V + + IV AL YLH +
Sbjct: 77 SFQTHDRLCFVM-EYANGGELFFHLSRERVFSEDRARFYGAEIVS----ALDYLH--SEK 129
Query: 633 SIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYTMAVTE 692
++V+RD + DFGL + D + GT Y+APE+
Sbjct: 130 NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGR 189
Query: 693 KCDVYSFGVVALEVLMGSHP 712
D + GVV E++ G P
Sbjct: 190 AVDWWGLGVVMYEMMCGRLP 209
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 89/202 (44%), Gaps = 20/202 (9%)
Query: 516 IGTGGYGSVYRAQLSSGKL-VALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
IG G YG V A + K+ VA++K+ S E + + E ++L + RH NI+ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIRKI--SPFEHQTYCQRTLREIKILLRFRHENIIGIND 92
Query: 575 FCL-----HNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYD 629
K ++++ + ME L+ +L+ L + + L Y+H
Sbjct: 93 IIRAPTIEQMKDVYIVQDLME-TDLYKLLKTQ----HLSNDHICYFLYQILRGLKYIH-- 145
Query: 630 CKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNR---TLVVGTYGYIAPELAY 686
+++HRD + + DFGLAR+ PD + T V T Y APE+
Sbjct: 146 -SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 687 -TMAVTEKCDVYSFGVVALEVL 707
+ T+ D++S G + E+L
Sbjct: 205 NSKGYTKSIDIWSVGCILAEML 226
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 87/203 (42%), Gaps = 18/203 (8%)
Query: 515 CIGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLY 573
+GTG +G V + + +G A+K L + + + +E E R+L + +VKL
Sbjct: 48 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLE 107
Query: 574 GFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELD---WTKRVNIVKSMAHALSYLHYDC 630
N ++++ EY G +F LR E + ++ + H+L ++ D
Sbjct: 108 FSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 631 KPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTL-VVGTYGYIAPELAYTMA 689
KP + D V DFGLA+ + RT + GT Y+APE+ +
Sbjct: 168 KPENLMIDQQGYIQ---------VTDFGLAKRV----KGRTWXLCGTPEYLAPEIILSKG 214
Query: 690 VTEKCDVYSFGVVALEVLMGSHP 712
+ D ++ GV+ E+ G P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 85/197 (43%), Gaps = 10/197 (5%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
+G+G YGSV A +G VA+KKL R +++ E RLL ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 575 FCLHNKCMFLIYE-YMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPS 633
+ + + Y+ + L N V+ +L ++ + L Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SAD 145
Query: 634 IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYT-MAVTE 692
I+HRD E + DF LAR H D T V T Y APE+ M +
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFYLAR--HTDDE-MTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 693 KCDVYSFGVVALEVLMG 709
D++S G + E+L G
Sbjct: 203 TVDIWSVGCIMAELLTG 219
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 95/223 (42%), Gaps = 21/223 (9%)
Query: 500 FEEMIEATEDFHIKYCIGTGGYGSVYRA-QLSSGKLVA---LKKLHRSETEEPAFLESFQ 555
F+ M+E + + + +G+G + V + Q +GK A +KK + E +
Sbjct: 20 FQSMVE--DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIE 77
Query: 556 TEARLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNI 615
E +L +IRH NI+ L+ + + LI E + G LF L E L +
Sbjct: 78 REVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL---AEKESLTEDEATQF 134
Query: 616 VKSMAHALSYL------HYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSN 669
+K + + YL H+D KP + + DFG+A + +
Sbjct: 135 LKQILDGVHYLHSKRIAHFDLKPENI-----MLLDKNVPNPRIKLIDFGIAHKIEAGNEF 189
Query: 670 RTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHP 712
+ + GT ++APE+ + + D++S GV+ +L G+ P
Sbjct: 190 KN-IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 231
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 87/201 (43%), Gaps = 18/201 (8%)
Query: 516 IGTGGYGSV---YRAQLSSGKLVALKKLHRSETEEPAFLESFQT--EARLLSQIRHRNIV 570
+G+G YGSV Y A+L + VA+KKL R + + + +T E RLL ++H N++
Sbjct: 36 VGSGAYGSVCSAYDARLR--QKVAVKKLSRPFQ---SLIHARRTYRELRLLKHLKHENVI 90
Query: 571 KLYGFCLHNKCMFLIYE-YMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYD 629
L + E Y+ + L N V++ L +V + L Y+H
Sbjct: 91 GLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQLLRGLKYIH-- 148
Query: 630 CKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYT-M 688
I+HRD E + DFGLAR T V T Y APE+ M
Sbjct: 149 -SAGIIHRDLKPSNVAVNEDSELRILDFGLAR---QADEEMTGYVATRWYRAPEIMLNWM 204
Query: 689 AVTEKCDVYSFGVVALEVLMG 709
+ D++S G + E+L G
Sbjct: 205 HYNQTVDIWSVGCIMAELLQG 225
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 87/203 (42%), Gaps = 18/203 (8%)
Query: 515 CIGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLY 573
+GTG +G V + + +G A+K L + + + +E E R+L + +VKL
Sbjct: 48 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLE 107
Query: 574 GFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELD---WTKRVNIVKSMAHALSYLHYDC 630
N ++++ EY G +F LR E + ++ + H+L ++ D
Sbjct: 108 FSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 631 KPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTL-VVGTYGYIAPELAYTMA 689
KP + D V DFGLA+ + RT + GT Y+APE+ +
Sbjct: 168 KPENLMIDQQGYIK---------VTDFGLAKRV----KGRTWXLCGTPEYLAPEIILSKG 214
Query: 690 VTEKCDVYSFGVVALEVLMGSHP 712
+ D ++ GV+ E+ G P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 92/218 (42%), Gaps = 25/218 (11%)
Query: 504 IEATEDFHIKYCIGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLS 562
I+ T+ + +K IG G Y R ++ A+K + +S+ + +E LL
Sbjct: 18 IQFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEI------LLR 71
Query: 563 QIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLF-CVLRN------DVEAVELDWTKRVNI 615
+H NI+ L K ++++ E M+ G L +LR + AV TK V
Sbjct: 72 YGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEY 131
Query: 616 VKSMAHALSYLHYDCKPS-IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVV 674
+ HA +H D KPS I++ D + DFG A+ L ++
Sbjct: 132 L----HAQGVVHRDLKPSNILYVDESGNPESIR------ICDFGFAKQLRAENGLLMTPC 181
Query: 675 GTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHP 712
T ++APE+ CD++S GV+ +L G P
Sbjct: 182 YTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTP 219
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 85/197 (43%), Gaps = 10/197 (5%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
+G+G YGSV A +G VA+KKL R +++ E RLL ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 575 FCLHNKCMFLIYE-YMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPS 633
+ + + Y+ + L N V+ +L ++ + L Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SAD 145
Query: 634 IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYT-MAVTE 692
I+HRD E + FGLAR H D T V T Y APE+ M +
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILGFGLAR--HTD-DEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 693 KCDVYSFGVVALEVLMG 709
D++S G + E+L G
Sbjct: 203 TVDIWSVGCIMAELLTG 219
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 97/228 (42%), Gaps = 22/228 (9%)
Query: 496 GRITFEEMIEATED-FHIKYCIGTGGYGSVYRA-QLSSGKLVA---LKKLHRSETEEPAF 550
G TF + E ED + + +G+G + V + Q +GK A +KK S +
Sbjct: 1 GMSTFRQ--EDVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVS 58
Query: 551 LESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWT 610
E + E +L +IRH NI+ L+ + + LI E + G LF L E L
Sbjct: 59 REEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL---AEKESLTED 115
Query: 611 KRVNIVKSMAHALSYL------HYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLH 664
+ +K + + YL H+D KP + + DFG+A +
Sbjct: 116 EATQFLKQILDGVHYLHSKRIAHFDLKPENI-----MLLDKNVPNPRIKLIDFGIAHKIE 170
Query: 665 PDSSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHP 712
+ + + GT ++APE+ + + D++S GV+ +L G+ P
Sbjct: 171 AGNEFKN-IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 85/209 (40%), Gaps = 8/209 (3%)
Query: 508 EDFHIKYCIGTGGYGSVYRAQL-SSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIR- 565
+DF + IG G Y V +L + ++ A+K + + + ++ QTE + Q
Sbjct: 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN 68
Query: 566 HRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSY 625
H +V L+ +F + EY+ G L ++ + E ++ AL+Y
Sbjct: 69 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPE---EHARFYSAEISLALNY 125
Query: 626 LHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELA 685
LH + I++RD + D+G+ + + GT YIAPE+
Sbjct: 126 LH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEIL 182
Query: 686 YTMAVTEKCDVYSFGVVALEVLMGSHPTD 714
D ++ GV+ E++ G P D
Sbjct: 183 RGEDYGFSVDWWALGVLMFEMMAGRSPFD 211
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 94/215 (43%), Gaps = 21/215 (9%)
Query: 507 TEDFHIKYCIGTGGYGSVYRA------QLSSGKLVALKKLHRSETEEPAFLESFQTEARL 560
T+D+ + +G G + V R Q + K++ KKL + ++ + EAR+
Sbjct: 30 TDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQK------LEREARI 83
Query: 561 LSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMA 620
++H NIV+L+ +L+++ + G LF D+ A E + + +
Sbjct: 84 CRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELF----EDIVARE--YYSEADASHCIH 137
Query: 621 HALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAF---VADFGLARLLHPDSSNRTLVVGTY 677
L +++ + IVHRD + +ADFGLA + + GT
Sbjct: 138 QILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTP 197
Query: 678 GYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHP 712
GY++PE+ + D+++ GV+ +L+G P
Sbjct: 198 GYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPP 232
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 87/205 (42%), Gaps = 23/205 (11%)
Query: 516 IGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARL-LSQIRHRNIVKLY 573
+G G +G V+R + +G A+KK+ LE F+ E + + + IV LY
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKVR---------LEVFRAEELMACAGLTSPRIVPLY 151
Query: 574 GFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPS 633
G + + E +E GSL +++ E L + + + L YLH
Sbjct: 152 GAVREGPWVNIFMELLEGGSLGQLVK---EQGCLPEDRALYYLGQALEGLEYLHSR---R 205
Query: 634 IVHRDXXXX-XXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTY-----GYIAPELAYT 687
I+H D A + DFG A L PD ++L+ G Y ++APE+
Sbjct: 206 ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLG 265
Query: 688 MAVTEKCDVYSFGVVALEVLMGSHP 712
+ K DV+S + L +L G HP
Sbjct: 266 RSCDAKVDVWSSCCMMLHMLNGCHP 290
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 92/227 (40%), Gaps = 34/227 (14%)
Query: 509 DFHIKYCIGTGGYGSVYRAQLSSGKL---VALKKLHRSETEEPAFLESFQTEARLLSQIR 565
D + IG G +G V +A++ L A+K++ +++ F E +L ++
Sbjct: 23 DIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDH--RDFAGELEVLCKLG 80
Query: 566 HR-NIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRN-------------DVEAVELDWTK 611
H NI+ L G C H ++L EY G+L LR + A L +
Sbjct: 81 HHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQ 140
Query: 612 RVNIVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRT 671
++ +A + YL + +HR+ A +ADFGL+R
Sbjct: 141 LLHFAADVARGMDYLS---QKQFIHRNLAARNILVGENYVAKIADFGLSR------GQEV 191
Query: 672 LVVGTYG-----YIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHP 712
V T G ++A E T DV+S+GV+ E++ +G P
Sbjct: 192 YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTP 238
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 88/207 (42%), Gaps = 19/207 (9%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVA---LKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVK 571
+G+G + V + Q +GK A +KK S + E + E +L +IRH NI+
Sbjct: 13 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 72
Query: 572 LYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYL----- 626
L+ + + LI E + G LF L E L + +K + + YL
Sbjct: 73 LHDIFENKTDVVLILELVSGGELFDFL---AEKESLTEDEATQFLKQILDGVHYLHSKRI 129
Query: 627 -HYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELA 685
H+D KP + + DFG+A + + + + GT ++APE+
Sbjct: 130 AHFDLKPENI-----MLLDKNVPNPRIKLIDFGIAHKIEAGNEFKN-IFGTPEFVAPEIV 183
Query: 686 YTMAVTEKCDVYSFGVVALEVLMGSHP 712
+ + D++S GV+ +L G+ P
Sbjct: 184 NYEPLGLEADMWSIGVITYILLSGASP 210
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 85/197 (43%), Gaps = 10/197 (5%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
+G+G YGSV A +G VA+KKL R +++ E RLL ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 575 FCLHNKCMFLIYE-YMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPS 633
+ + + Y+ + L N V+ +L ++ + L Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SAD 145
Query: 634 IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYT-MAVTE 692
I+HRD E + D GLAR H D T V T Y APE+ M +
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDAGLAR--HTD-DEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 693 KCDVYSFGVVALEVLMG 709
D++S G + E+L G
Sbjct: 203 TVDIWSVGCIMAELLTG 219
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 96/216 (44%), Gaps = 23/216 (10%)
Query: 507 TEDFHIKYCIGTGGYGSVYRA------QLSSGKLVALKKLHRSETEEPAFLESFQTEARL 560
T+++ + +G G + V R Q + K++ KKL + ++ + EAR+
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQK------LEREARI 56
Query: 561 LSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVEL-DWTKRVNIVKSM 619
++H NIV+L+ +L+++ + G LF D+ A E + ++ +
Sbjct: 57 CRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELF----EDIVAREYYSEADASHCIQQI 112
Query: 620 AHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAF---VADFGLARLLHPDSSNRTLVVGT 676
++++ H + IVHRD + +ADFGLA + D GT
Sbjct: 113 LESVNHCHLN---GIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGT 169
Query: 677 YGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHP 712
GY++PE+ + D+++ GV+ +L+G P
Sbjct: 170 PGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPP 205
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 88/202 (43%), Gaps = 20/202 (9%)
Query: 516 IGTGGYGSVYRAQLSSGKL-VALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
IG G YG V A + K+ VA+KK+ S E + + E ++L + RH NI+ +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGIND 108
Query: 575 FCL-----HNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYD 629
K ++L+ M L+ +L+ L + + L Y+H
Sbjct: 109 IIRAPTIEQMKDVYLVTHLMG-ADLYKLLKTQ----HLSNDHICYFLYQILRGLKYIH-- 161
Query: 630 CKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNR---TLVVGTYGYIAPELAY 686
+++HRD + + DFGLAR+ PD + T V T Y APE+
Sbjct: 162 -SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 220
Query: 687 -TMAVTEKCDVYSFGVVALEVL 707
+ T+ D++S G + E+L
Sbjct: 221 NSKGYTKSIDIWSVGCILAEML 242
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 86/201 (42%), Gaps = 18/201 (8%)
Query: 516 IGTGGYGSV---YRAQLSSGKLVALKKLHRSETEEPAFLESFQT--EARLLSQIRHRNIV 570
+G+G YGSV Y A+L + VA+KKL R + + + +T E RLL ++H N++
Sbjct: 36 VGSGAYGSVCSAYDARLR--QKVAVKKLSRPFQ---SLIHARRTYRELRLLKHLKHENVI 90
Query: 571 KLYGFCLHNKCMFLIYE-YMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYD 629
L + E Y+ + L N V+ L +V + L Y+H
Sbjct: 91 GLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIH-- 148
Query: 630 CKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYT-M 688
I+HRD E + DFGLAR T V T Y APE+ M
Sbjct: 149 -SAGIIHRDLKPSNVAVNEDSELRILDFGLAR---QADEEMTGYVATRWYRAPEIMLNWM 204
Query: 689 AVTEKCDVYSFGVVALEVLMG 709
+ D++S G + E+L G
Sbjct: 205 HYNQTVDIWSVGCIMAELLQG 225
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 85/209 (40%), Gaps = 8/209 (3%)
Query: 508 EDFHIKYCIGTGGYGSVYRAQL-SSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIR- 565
+DF + IG G Y V +L + ++ A+K + + + ++ QTE + Q
Sbjct: 5 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN 64
Query: 566 HRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSY 625
H +V L+ +F + EY+ G L ++ + E ++ AL+Y
Sbjct: 65 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPE---EHARFYSAEISLALNY 121
Query: 626 LHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELA 685
LH + I++RD + D+G+ + + GT YIAPE+
Sbjct: 122 LH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEIL 178
Query: 686 YTMAVTEKCDVYSFGVVALEVLMGSHPTD 714
D ++ GV+ E++ G P D
Sbjct: 179 RGEDYGFSVDWWALGVLMFEMMAGRSPFD 207
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 87/203 (42%), Gaps = 18/203 (8%)
Query: 515 CIGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLY 573
+GTG +G V + + +G A+K L + + + +E E R+L + +VKL
Sbjct: 49 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 108
Query: 574 GFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELD---WTKRVNIVKSMAHALSYLHYDC 630
N ++++ EY+ G +F LR E + ++ + H+L ++ D
Sbjct: 109 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDL 168
Query: 631 KPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTL-VVGTYGYIAPELAYTMA 689
KP + D V DFG A+ + RT + GT Y+APE+ +
Sbjct: 169 KPENLLIDQQGYIQ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKG 215
Query: 690 VTEKCDVYSFGVVALEVLMGSHP 712
+ D ++ GV+ E+ G P
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 90/222 (40%), Gaps = 17/222 (7%)
Query: 500 FEEMIEATEDFHIKYCIGTGGYGSVYRAQL--SSGKLVALK-KLHRSETEEPAFLESFQT 556
E+++ + F + +G G +GSV AQL G V + K+ +++ + +E F
Sbjct: 15 LEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLR 74
Query: 557 EARLLSQIRHRNIVKLYGFCLHNKCM------FLIYEYMERGSLFCVL---RNDVEAVEL 607
EA + + H ++ KL G L ++ +I +M+ G L L R L
Sbjct: 75 EAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNL 134
Query: 608 DWTKRVNIVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDS 667
V + +A + YL + +HRD VADFGL+R ++
Sbjct: 135 PLQTLVRFMVDIACGMEYLS---SRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGD 191
Query: 668 SNRTLVVGT--YGYIAPELAYTMAVTEKCDVYSFGVVALEVL 707
R ++A E T DV++FGV E++
Sbjct: 192 YYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIM 233
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 88/203 (43%), Gaps = 22/203 (10%)
Query: 516 IGTGGYGSV---YRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKL 572
IG+G G V Y A L VA+KKL R + +++ E L+ + H+NI+ L
Sbjct: 32 IGSGAQGIVVAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKVVNHKNIIGL 88
Query: 573 YGFCLHNKCM------FLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYL 626
K + +++ E M+ +L V++ +ELD + ++ M + +L
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMD-ANLSQVIQ-----MELDHERMSYLLYQMLVGIKHL 142
Query: 627 HYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAY 686
H I+HRD + DFGLAR VV Y Y APE+
Sbjct: 143 H---SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRY-YRAPEVIL 198
Query: 687 TMAVTEKCDVYSFGVVALEVLMG 709
M E D++S GV+ E++ G
Sbjct: 199 GMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 85/197 (43%), Gaps = 10/197 (5%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
+G+G YGSV A +G VA+KKL R +++ E RLL ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 575 FCLHNKCMFLIYE-YMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPS 633
+ + + Y+ + L N V+ +L ++ + L Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SAD 145
Query: 634 IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYT-MAVTE 692
I+HRD E + D GLAR H D T V T Y APE+ M +
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDRGLAR--HTDDE-MTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 693 KCDVYSFGVVALEVLMG 709
D++S G + E+L G
Sbjct: 203 TVDIWSVGCIMAELLTG 219
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 87/203 (42%), Gaps = 18/203 (8%)
Query: 515 CIGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLY 573
+GTG +G V + + +G A+K L + + + +E E R+L + +VKL
Sbjct: 48 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 574 GFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELD---WTKRVNIVKSMAHALSYLHYDC 630
N ++++ EY+ G +F LR E + ++ + H+L ++ D
Sbjct: 108 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 631 KPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTL-VVGTYGYIAPELAYTMA 689
KP + D V DFG A+ + RT + GT Y+APE+ +
Sbjct: 168 KPENLLIDQQGYIQ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKG 214
Query: 690 VTEKCDVYSFGVVALEVLMGSHP 712
+ D ++ GV+ E+ G P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 87/203 (42%), Gaps = 18/203 (8%)
Query: 515 CIGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLY 573
+GTG +G V + + +G A+K L + + + +E E R+L + +VKL
Sbjct: 49 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 108
Query: 574 GFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELD---WTKRVNIVKSMAHALSYLHYDC 630
N ++++ EY+ G +F LR E + ++ + H+L ++ D
Sbjct: 109 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 168
Query: 631 KPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVV-GTYGYIAPELAYTMA 689
KP + D V DFG A+ + RT + GT Y+APE+ +
Sbjct: 169 KPENLLIDQQGYIQ---------VTDFGFAKRV----KGRTWTLCGTPEYLAPEIILSKG 215
Query: 690 VTEKCDVYSFGVVALEVLMGSHP 712
+ D ++ GV+ E+ G P
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 87/203 (42%), Gaps = 18/203 (8%)
Query: 515 CIGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLY 573
+GTG +G V + + +G A+K L + + + +E E R+L + +VKL
Sbjct: 48 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 574 GFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELD---WTKRVNIVKSMAHALSYLHYDC 630
N ++++ EY+ G +F LR E + ++ + H+L ++ D
Sbjct: 108 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 631 KPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTL-VVGTYGYIAPELAYTMA 689
KP + D V DFG A+ + RT + GT Y+APE+ +
Sbjct: 168 KPENLLIDQQGYIQ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKG 214
Query: 690 VTEKCDVYSFGVVALEVLMGSHP 712
+ D ++ GV+ E+ G P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 87/203 (42%), Gaps = 18/203 (8%)
Query: 515 CIGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLY 573
+GTG +G V + + +G A+K L + + + +E E R+L + +VKL
Sbjct: 34 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 93
Query: 574 GFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELD---WTKRVNIVKSMAHALSYLHYDC 630
N ++++ EY+ G +F LR E + ++ + H+L ++ D
Sbjct: 94 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 153
Query: 631 KPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVV-GTYGYIAPELAYTMA 689
KP + D V DFG A+ + RT + GT Y+APE+ +
Sbjct: 154 KPENLLIDQQGYIQ---------VTDFGFAKRV----KGRTWTLCGTPEYLAPEIILSKG 200
Query: 690 VTEKCDVYSFGVVALEVLMGSHP 712
+ D ++ GV+ E+ G P
Sbjct: 201 YNKAVDWWALGVLIYEMAAGYPP 223
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 85/197 (43%), Gaps = 10/197 (5%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
+G+G YGSV A +G VA+KKL R +++ E RLL ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 575 FCLHNKCMFLIYE-YMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPS 633
+ + + Y+ + L N V+ +L ++ + L Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SAD 145
Query: 634 IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYT-MAVTE 692
I+HRD E + D GLAR H D T V T Y APE+ M +
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDGGLAR--HTDDE-MTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 693 KCDVYSFGVVALEVLMG 709
D++S G + E+L G
Sbjct: 203 TVDIWSVGCIMAELLTG 219
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 86/203 (42%), Gaps = 18/203 (8%)
Query: 515 CIGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLY 573
+GTG +G V + SG A+K L + + + +E E R+L + +VKL
Sbjct: 48 TLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 574 GFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELD---WTKRVNIVKSMAHALSYLHYDC 630
N ++++ EY+ G +F LR E + ++ + H+L ++ D
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 631 KPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTL-VVGTYGYIAPELAYTMA 689
KP + D V DFG A+ + RT + GT Y+APE+ +
Sbjct: 168 KPENLLIDQQGYIQ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKG 214
Query: 690 VTEKCDVYSFGVVALEVLMGSHP 712
+ D ++ GV+ E+ G P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 89/217 (41%), Gaps = 22/217 (10%)
Query: 506 ATEDFHIKYCIGTGGYGSVYRAQLSSGKL-------VALKKLHRSETEEPAFLESFQTEA 558
A E + +G G +G VY ++ G + VA+K ++ + + F EA
Sbjct: 8 AREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERI--EFLNEA 64
Query: 559 RLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELD-------WTK 611
++ + ++V+L G + +I E M RG L LR+ +E + +K
Sbjct: 65 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 124
Query: 612 RVNIVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRT 671
+ + +A ++YL+ + VHRD + DFG+ R + R
Sbjct: 125 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRK 181
Query: 672 LVVG--TYGYIAPELAYTMAVTEKCDVYSFGVVALEV 706
G +++PE T DV+SFGVV E+
Sbjct: 182 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 218
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 86/203 (42%), Gaps = 18/203 (8%)
Query: 515 CIGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLY 573
+GTG +G V + + +G A+K L + + + +E E R+L + +VKL
Sbjct: 48 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 574 GFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELD---WTKRVNIVKSMAHALSYLHYDC 630
N ++++ EY G +F LR E + ++ + H+L ++ D
Sbjct: 108 FSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 631 KPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTL-VVGTYGYIAPELAYTMA 689
KP + D V DFG A+ + RT + GT Y+APE+ +
Sbjct: 168 KPENLMIDQQGYIK---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKG 214
Query: 690 VTEKCDVYSFGVVALEVLMGSHP 712
+ D ++ GV+ E+ G P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 88/203 (43%), Gaps = 22/203 (10%)
Query: 516 IGTGGYGSV---YRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKL 572
IG+G G V Y A L VA+KKL R + +++ E L+ + H+NI+ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKVVNHKNIIGL 88
Query: 573 YGFCLHNKCM------FLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYL 626
K + +++ E M+ +L V++ +ELD + ++ M + +L
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMD-ANLSQVIQ-----MELDHERMSYLLYQMLVGIKHL 142
Query: 627 HYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAY 686
H I+HRD + DFGLAR VV Y Y APE+
Sbjct: 143 H---SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRY-YRAPEVIL 198
Query: 687 TMAVTEKCDVYSFGVVALEVLMG 709
M E D++S GV+ E++ G
Sbjct: 199 GMGYKENVDIWSVGVIMGEMIKG 221
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 88/210 (41%), Gaps = 10/210 (4%)
Query: 508 EDFHIKYCIGTGGYGSVYRAQL-SSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIR- 565
+DF + IG G Y V +L + ++ A+K + + + ++ QTE + Q
Sbjct: 20 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN 79
Query: 566 HRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSY 625
H +V L+ +F + EY+ G L ++ + E ++ AL+Y
Sbjct: 80 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPE---EHARFYSAEISLALNY 136
Query: 626 LHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARL-LHPDSSNRTLVVGTYGYIAPEL 684
LH + I++RD + D+G+ + L P + + GT YIAPE+
Sbjct: 137 LH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT-SXFCGTPNYIAPEI 192
Query: 685 AYTMAVTEKCDVYSFGVVALEVLMGSHPTD 714
D ++ GV+ E++ G P D
Sbjct: 193 LRGEDYGFSVDWWALGVLMFEMMAGRSPFD 222
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 86/203 (42%), Gaps = 18/203 (8%)
Query: 515 CIGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLY 573
+GTG +G V + SG A+K L + + + +E E R+L + +VKL
Sbjct: 69 TLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 128
Query: 574 GFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELD---WTKRVNIVKSMAHALSYLHYDC 630
N ++++ EY+ G +F LR E + ++ + H+L ++ D
Sbjct: 129 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDL 188
Query: 631 KPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTL-VVGTYGYIAPELAYTMA 689
KP + D V DFG A+ + RT + GT Y+APE+ +
Sbjct: 189 KPENLLIDQQGYIQ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKG 235
Query: 690 VTEKCDVYSFGVVALEVLMGSHP 712
+ D ++ GV+ E+ G P
Sbjct: 236 YNKAVDWWALGVLIYEMAAGYPP 258
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 86/203 (42%), Gaps = 18/203 (8%)
Query: 515 CIGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLY 573
+GTG +G V + SG A+K L + + + +E E R+L + +VKL
Sbjct: 48 TLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 574 GFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELD---WTKRVNIVKSMAHALSYLHYDC 630
N ++++ EY+ G +F LR E + ++ + H+L ++ D
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 631 KPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTL-VVGTYGYIAPELAYTMA 689
KP + D V DFG A+ + RT + GT Y+APE+ +
Sbjct: 168 KPENLLIDQQGYIQ---------VTDFGFAKRV----KGRTWXLAGTPEYLAPEIILSKG 214
Query: 690 VTEKCDVYSFGVVALEVLMGSHP 712
+ D ++ GV+ E+ G P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 87/203 (42%), Gaps = 18/203 (8%)
Query: 515 CIGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLY 573
+GTG +G V + + +G A+K L + + + +E E R+L + +VKL
Sbjct: 48 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 574 GFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELD---WTKRVNIVKSMAHALSYLHYDC 630
N ++++ EY+ G +F LR E + ++ + H+L ++ D
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 631 KPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTL-VVGTYGYIAPELAYTMA 689
KP + D V DFG A+ + RT + GT Y+APE+ +
Sbjct: 168 KPENLLIDQQGYIQ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKG 214
Query: 690 VTEKCDVYSFGVVALEVLMGSHP 712
+ D ++ GV+ E+ G P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 87/203 (42%), Gaps = 18/203 (8%)
Query: 515 CIGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLY 573
+GTG +G V + + +G A+K L + + + +E E R+L + +VKL
Sbjct: 48 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 574 GFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELD---WTKRVNIVKSMAHALSYLHYDC 630
N ++++ EY+ G +F LR E + ++ + H+L ++ D
Sbjct: 108 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 631 KPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTL-VVGTYGYIAPELAYTMA 689
KP + D V DFG A+ + RT + GT Y+APE+ +
Sbjct: 168 KPENLLIDQQGYIQ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKG 214
Query: 690 VTEKCDVYSFGVVALEVLMGSHP 712
+ D ++ GV+ E+ G P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 87/203 (42%), Gaps = 18/203 (8%)
Query: 515 CIGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLY 573
+GTG +G V + + +G A+K L + + + +E E R+L + +VKL
Sbjct: 49 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 108
Query: 574 GFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELD---WTKRVNIVKSMAHALSYLHYDC 630
N ++++ EY+ G +F LR E + ++ + H+L ++ D
Sbjct: 109 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 168
Query: 631 KPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTL-VVGTYGYIAPELAYTMA 689
KP + D V DFG A+ + RT + GT Y+APE+ +
Sbjct: 169 KPENLLIDQQGYIQ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKG 215
Query: 690 VTEKCDVYSFGVVALEVLMGSHP 712
+ D ++ GV+ E+ G P
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 87/203 (42%), Gaps = 18/203 (8%)
Query: 515 CIGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLY 573
+GTG +G V + + +G A+K L + + + +E E R+L + +VKL
Sbjct: 48 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 574 GFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELD---WTKRVNIVKSMAHALSYLHYDC 630
N ++++ EY+ G +F LR E + ++ + H+L ++ D
Sbjct: 108 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 631 KPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTL-VVGTYGYIAPELAYTMA 689
KP + D V DFG A+ + RT + GT Y+APE+ +
Sbjct: 168 KPENLLIDQQGYIQ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKG 214
Query: 690 VTEKCDVYSFGVVALEVLMGSHP 712
+ D ++ GV+ E+ G P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 87/203 (42%), Gaps = 18/203 (8%)
Query: 515 CIGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLY 573
+GTG +G V + + +G A+K L + + + +E E R+L + +VKL
Sbjct: 48 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 574 GFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELD---WTKRVNIVKSMAHALSYLHYDC 630
N ++++ EY+ G +F LR E + ++ + H+L ++ D
Sbjct: 108 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 631 KPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTL-VVGTYGYIAPELAYTMA 689
KP + D V DFG A+ + RT + GT Y+APE+ +
Sbjct: 168 KPENLLIDQQGYIQ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKG 214
Query: 690 VTEKCDVYSFGVVALEVLMGSHP 712
+ D ++ GV+ E+ G P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 85/201 (42%), Gaps = 18/201 (8%)
Query: 516 IGTGGYGSV---YRAQLSSGKLVALKKLHRSETEEPAFLESFQT--EARLLSQIRHRNIV 570
+G+G YGSV Y A+L VA+KKL R + + + +T E RLL ++H N++
Sbjct: 28 VGSGAYGSVCSAYDARLRQK--VAVKKLSRPFQ---SLIHARRTYRELRLLKHLKHENVI 82
Query: 571 KLYGFCLHNKCMFLIYE-YMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYD 629
L + E Y+ + L N V+ L +V + L Y+H
Sbjct: 83 GLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIH-- 140
Query: 630 CKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYT-M 688
I+HRD E + DFGLAR T V T Y APE+ M
Sbjct: 141 -SAGIIHRDLKPSNVAVNEDCELRILDFGLAR---QADEEMTGYVATRWYRAPEIMLNWM 196
Query: 689 AVTEKCDVYSFGVVALEVLMG 709
+ D++S G + E+L G
Sbjct: 197 HYNQTVDIWSVGCIMAELLQG 217
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 86/203 (42%), Gaps = 18/203 (8%)
Query: 515 CIGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLY 573
+GTG +G V + SG A+K L + + + +E E R+L + +VKL
Sbjct: 48 TLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 574 GFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELD---WTKRVNIVKSMAHALSYLHYDC 630
N ++++ EY+ G +F LR E + ++ + H+L ++ D
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 631 KPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTL-VVGTYGYIAPELAYTMA 689
KP + D V DFG A+ + RT + GT Y+APE+ +
Sbjct: 168 KPENLLIDQQGYIQ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKG 214
Query: 690 VTEKCDVYSFGVVALEVLMGSHP 712
+ D ++ GV+ E+ G P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 86/203 (42%), Gaps = 18/203 (8%)
Query: 515 CIGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLY 573
+GTG +G V + + +G A+K L + + + +E E R+L + +VKL
Sbjct: 48 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 574 GFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELD---WTKRVNIVKSMAHALSYLHYDC 630
N ++++ EY G +F LR E + ++ + H+L ++ D
Sbjct: 108 FSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 631 KPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTL-VVGTYGYIAPELAYTMA 689
KP + D V DFG A+ + RT + GT Y+APE+ +
Sbjct: 168 KPENLMIDQQGYIK---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKG 214
Query: 690 VTEKCDVYSFGVVALEVLMGSHP 712
+ D ++ GV+ E+ G P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 86/203 (42%), Gaps = 18/203 (8%)
Query: 515 CIGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLY 573
+GTG +G V + + +G A+K L + + + +E E R+L + +VKL
Sbjct: 48 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 574 GFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELD---WTKRVNIVKSMAHALSYLHYDC 630
N ++++ EY G +F LR E + ++ + H+L ++ D
Sbjct: 108 FSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 631 KPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTL-VVGTYGYIAPELAYTMA 689
KP + D V DFG A+ + RT + GT Y+APE+ +
Sbjct: 168 KPENLMIDQQGYIQ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKG 214
Query: 690 VTEKCDVYSFGVVALEVLMGSHP 712
+ D ++ GV+ E+ G P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 86/203 (42%), Gaps = 18/203 (8%)
Query: 515 CIGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLY 573
+GTG +G V + SG A+K L + + + +E E R+L + +VKL
Sbjct: 43 TLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 102
Query: 574 GFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELD---WTKRVNIVKSMAHALSYLHYDC 630
N ++++ EY+ G +F LR E + ++ + H+L ++ D
Sbjct: 103 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDL 162
Query: 631 KPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTL-VVGTYGYIAPELAYTMA 689
KP + D V DFG A+ + RT + GT Y+APE+ +
Sbjct: 163 KPENLLIDQQGYIQ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKG 209
Query: 690 VTEKCDVYSFGVVALEVLMGSHP 712
+ D ++ GV+ E+ G P
Sbjct: 210 YNKAVDWWALGVLIYEMAAGYPP 232
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 97/208 (46%), Gaps = 22/208 (10%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQ--TEARL-LSQIRHRNIVK 571
+G+G +G+V++ + G+ + + + E+ + +SFQ T+ L + + H +IV+
Sbjct: 39 LGSGVFGTVHKGVWIPEGESIKIPVCIKV-IEDKSGRQSFQAVTDHMLAIGSLDHAHIVR 97
Query: 572 LYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVE----LDWTKRVNIVKSMAHALSYLH 627
L G C + L+ +Y+ GSL +R A+ L+W V I K M +
Sbjct: 98 LLGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWG--VQIAKGM-------Y 147
Query: 628 YDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSN--RTLVVGTYGYIAPELA 685
Y + +VHR+ + VADFG+A LL PD + ++A E
Sbjct: 148 YLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESI 207
Query: 686 YTMAVTEKCDVYSFGVVALEVL-MGSHP 712
+ T + DV+S+GV E++ G+ P
Sbjct: 208 HFGKYTHQSDVWSYGVTVWELMTFGAEP 235
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 86/203 (42%), Gaps = 18/203 (8%)
Query: 515 CIGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLY 573
+GTG +G V + SG A+K L + + + +E E R+L + +VKL
Sbjct: 48 TLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 574 GFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELD---WTKRVNIVKSMAHALSYLHYDC 630
N ++++ EY+ G +F LR E + ++ + H+L ++ D
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 631 KPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTL-VVGTYGYIAPELAYTMA 689
KP + D V DFG A+ + RT + GT Y+APE+ +
Sbjct: 168 KPENLLIDQQGYIQ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKG 214
Query: 690 VTEKCDVYSFGVVALEVLMGSHP 712
+ D ++ GV+ E+ G P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 90/217 (41%), Gaps = 22/217 (10%)
Query: 506 ATEDFHIKYCIGTGGYGSVYRAQLSSGKL-------VALKKLHRSETEEPAFLESFQTEA 558
A E + +G G +G VY ++ G + VA+K ++ + + F EA
Sbjct: 10 AREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERI--EFLNEA 66
Query: 559 RLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELD-------WTK 611
++ + ++V+L G + +I E M RG L LR+ +E + +K
Sbjct: 67 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 126
Query: 612 RVNIVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRT 671
+ + +A ++YL+ + VHRD + DFG+ R ++ R
Sbjct: 127 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 183
Query: 672 LVVG--TYGYIAPELAYTMAVTEKCDVYSFGVVALEV 706
G +++PE T DV+SFGVV E+
Sbjct: 184 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 220
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 86/203 (42%), Gaps = 18/203 (8%)
Query: 515 CIGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLY 573
+GTG +G V + SG A+K L + + + +E E R+L + +VKL
Sbjct: 48 TLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 574 GFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELD---WTKRVNIVKSMAHALSYLHYDC 630
N ++++ EY+ G +F LR E + ++ + H+L ++ D
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 631 KPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTL-VVGTYGYIAPELAYTMA 689
KP + D V DFG A+ + RT + GT Y+APE+ +
Sbjct: 168 KPENLLIDQQGYIQ---------VTDFGFAKRV----KGRTWXLXGTPEYLAPEIILSKG 214
Query: 690 VTEKCDVYSFGVVALEVLMGSHP 712
+ D ++ GV+ E+ G P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 85/202 (42%), Gaps = 18/202 (8%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
IG+G G V A G VA+KKL R + +++ E LL + H+NI+ L
Sbjct: 30 IGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYR-ELVLLKCVNHKNIISLLN 88
Query: 575 FCLHNKCM------FLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHY 628
K + +L+ E M+ C V +ELD + ++ M + +LH
Sbjct: 89 VFTPQKTLEEFQDVYLVMELMDAN--LC----QVIHMELDHERMSYLLYQMLCGIKHLH- 141
Query: 629 DCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYTM 688
I+HRD + DFGLAR + VV Y Y APE+ M
Sbjct: 142 --SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFMMTPYVVTRY-YRAPEVILGM 198
Query: 689 AVTEKCDVYSFGVVALEVLMGS 710
E D++S G + E++ GS
Sbjct: 199 GYKENVDIWSVGCIMGELVKGS 220
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 86/203 (42%), Gaps = 18/203 (8%)
Query: 515 CIGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLY 573
+GTG +G V + SG A+K L + + + +E E R+L + +VKL
Sbjct: 48 TLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 574 GFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELD---WTKRVNIVKSMAHALSYLHYDC 630
N ++++ EY+ G +F LR E + ++ + H+L ++ D
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 631 KPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTL-VVGTYGYIAPELAYTMA 689
KP + D V DFG A+ + RT + GT Y+APE+ +
Sbjct: 168 KPENLLIDQQGYIQ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKG 214
Query: 690 VTEKCDVYSFGVVALEVLMGSHP 712
+ D ++ GV+ E+ G P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 86/203 (42%), Gaps = 18/203 (8%)
Query: 515 CIGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLY 573
+GTG +G V + SG A+K L + + + +E E R+L + +VKL
Sbjct: 48 TLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 574 GFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELD---WTKRVNIVKSMAHALSYLHYDC 630
N ++++ EY+ G +F LR E + ++ + H+L ++ D
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 631 KPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTL-VVGTYGYIAPELAYTMA 689
KP + D V DFG A+ + RT + GT Y+APE+ +
Sbjct: 168 KPENLLIDQQGYIQ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKG 214
Query: 690 VTEKCDVYSFGVVALEVLMGSHP 712
+ D ++ GV+ E+ G P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 81/207 (39%), Gaps = 22/207 (10%)
Query: 516 IGTGGYGSVYRAQLSSGKLVALK------KLHRSETEEPAFLESFQTEARLLSQIRHRNI 569
+G G +GSV L +LK KL S E +E F +EA + H N+
Sbjct: 42 LGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQRE---IEEFLSEAACMKDFSHPNV 98
Query: 570 VKLYGFCLHNKCM-----FLIYEYMERGSLFCVL---RNDVEAVELDWTKRVNIVKSMAH 621
++L G C+ +I +M+ G L L R + + + + +A
Sbjct: 99 IRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIAL 158
Query: 622 ALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTY--GY 679
+ YL + +HRD VADFGL++ ++ R + +
Sbjct: 159 GMEYL---SNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKW 215
Query: 680 IAPELAYTMAVTEKCDVYSFGVVALEV 706
IA E T K DV++FGV E+
Sbjct: 216 IAIESLADRVYTSKSDVWAFGVTMWEI 242
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 86/205 (41%), Gaps = 23/205 (11%)
Query: 516 IGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARL-LSQIRHRNIVKLY 573
+G G +G V+R + +G A+KK+ LE F+ E + + + IV LY
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKKVR---------LEVFRAEELMACAGLTSPRIVPLY 132
Query: 574 GFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPS 633
G + + E +E GSL +++ E L + + + L YLH
Sbjct: 133 GAVREGPWVNIFMELLEGGSLGQLVK---EQGCLPEDRALYYLGQALEGLEYLHSR---R 186
Query: 634 IVHRDXXXX-XXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTY-----GYIAPELAYT 687
I+H D A + DFG A L PD + L+ G Y ++APE+
Sbjct: 187 ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLG 246
Query: 688 MAVTEKCDVYSFGVVALEVLMGSHP 712
+ K DV+S + L +L G HP
Sbjct: 247 RSCDAKVDVWSSCCMMLHMLNGCHP 271
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 89/217 (41%), Gaps = 22/217 (10%)
Query: 506 ATEDFHIKYCIGTGGYGSVYRAQLSSGKL-------VALKKLHRSETEEPAFLESFQTEA 558
A E + +G G +G VY ++ G + VA+K ++ + + F EA
Sbjct: 17 AREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERI--EFLNEA 73
Query: 559 RLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELD-------WTK 611
++ + ++V+L G + +I E M RG L LR+ +E + +K
Sbjct: 74 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 133
Query: 612 RVNIVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRT 671
+ + +A ++YL+ + VHRD + DFG+ R + R
Sbjct: 134 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRK 190
Query: 672 LVVG--TYGYIAPELAYTMAVTEKCDVYSFGVVALEV 706
G +++PE T DV+SFGVV E+
Sbjct: 191 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 227
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 93/224 (41%), Gaps = 30/224 (13%)
Query: 509 DFHIKYCIGTGGYGSVYRAQLSSGKL-VALKKLHRSETEEPAFLESFQTEARLLSQIRHR 567
DF C+G GG+G V+ A+ A+K++ R E A E E + L+++ H
Sbjct: 6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRI-RLPNRELA-REKVMREVKALAKLEHP 63
Query: 568 NIVKLYGFCLHNKC------------MFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNI 615
IV+ + L +++ + + +L + E + + ++I
Sbjct: 64 GIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHI 123
Query: 616 VKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLV-- 673
+A A+ +LH ++HRD V DFGL + D +T++
Sbjct: 124 FLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTP 180
Query: 674 ----------VGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVL 707
VGT Y++PE + + + K D++S G++ E+L
Sbjct: 181 MPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 86/203 (42%), Gaps = 18/203 (8%)
Query: 515 CIGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLY 573
+GTG +G V + SG A+K L + + + +E E R+L + +VKL
Sbjct: 48 TLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 574 GFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELD---WTKRVNIVKSMAHALSYLHYDC 630
N ++++ EY+ G +F LR E + ++ + H+L ++ D
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 631 KPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTL-VVGTYGYIAPELAYTMA 689
KP + D V DFG A+ + RT + GT Y+APE+ +
Sbjct: 168 KPENLLIDQQGYIQ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKG 214
Query: 690 VTEKCDVYSFGVVALEVLMGSHP 712
+ D ++ GV+ E+ G P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 86/203 (42%), Gaps = 18/203 (8%)
Query: 515 CIGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLY 573
+GTG +G V + SG A+K L + + + +E E R+L + +VKL
Sbjct: 48 TLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 574 GFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELD---WTKRVNIVKSMAHALSYLHYDC 630
N ++++ EY+ G +F LR E + ++ + H+L ++ D
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 631 KPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTL-VVGTYGYIAPELAYTMA 689
KP + D V DFG A+ + RT + GT Y+APE+ +
Sbjct: 168 KPENLLIDQQGYIQ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKG 214
Query: 690 VTEKCDVYSFGVVALEVLMGSHP 712
+ D ++ GV+ E+ G P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 87/198 (43%), Gaps = 14/198 (7%)
Query: 516 IGTGGYGSVYRAQLSSGKL---VALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKL 572
+G G +GSV + K VA+K L + E A E EA+++ Q+ + IV+L
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVL--KQGTEKADTEEMMREAQIMHQLDNPYIVRL 401
Query: 573 YGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKP 632
G C + + L+ E G L L E + + + ++ ++ + YL +
Sbjct: 402 IGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPV--SNVAELLHQVSMGMKYLE---EK 455
Query: 633 SIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTL-VVGTY--GYIAPELAYTMA 689
+ VHR+ A ++DFGL++ L D S T G + + APE
Sbjct: 456 NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRK 515
Query: 690 VTEKCDVYSFGVVALEVL 707
+ + DV+S+GV E L
Sbjct: 516 FSSRSDVWSYGVTMWEAL 533
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 100/212 (47%), Gaps = 30/212 (14%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQ--TEARL-LSQIRHRNIVK 571
+G+G +G+V++ + G+ + + + E+ + +SFQ T+ L + + H +IV+
Sbjct: 21 LGSGVFGTVHKGVWIPEGESIKIPVCIKV-IEDKSGRQSFQAVTDHMLAIGSLDHAHIVR 79
Query: 572 LYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVE----LDWTKRVNIVKSMAHALSYLH 627
L G C + L+ +Y+ GSL +R A+ L+W V I K M +
Sbjct: 80 LLGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWG--VQIAKGM-------Y 129
Query: 628 YDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPD------SSNRTLVVGTYGYIA 681
Y + +VHR+ + VADFG+A LL PD S +T + ++A
Sbjct: 130 YLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPI----KWMA 185
Query: 682 PELAYTMAVTEKCDVYSFGVVALEVL-MGSHP 712
E + T + DV+S+GV E++ G+ P
Sbjct: 186 LESIHFGKYTHQSDVWSYGVTVWELMTFGAEP 217
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 86/203 (42%), Gaps = 18/203 (8%)
Query: 515 CIGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLY 573
+GTG +G V + SG A+K L + + + +E E R+L + +VKL
Sbjct: 49 TLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 108
Query: 574 GFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELD---WTKRVNIVKSMAHALSYLHYDC 630
N ++++ EY+ G +F LR E + ++ + H+L ++ D
Sbjct: 109 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 168
Query: 631 KPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTL-VVGTYGYIAPELAYTMA 689
KP + D V DFG A+ + RT + GT Y+APE+ +
Sbjct: 169 KPENLLIDQQGYIQ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKG 215
Query: 690 VTEKCDVYSFGVVALEVLMGSHP 712
+ D ++ GV+ E+ G P
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 86/203 (42%), Gaps = 18/203 (8%)
Query: 515 CIGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLY 573
+GTG +G V + SG A+K L + + + +E E R+L + +VKL
Sbjct: 35 TLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 94
Query: 574 GFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELD---WTKRVNIVKSMAHALSYLHYDC 630
N ++++ EY+ G +F LR E + ++ + H+L ++ D
Sbjct: 95 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 154
Query: 631 KPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTL-VVGTYGYIAPELAYTMA 689
KP + D V DFG A+ + RT + GT Y+APE+ +
Sbjct: 155 KPENLLIDEQGYIQ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKG 201
Query: 690 VTEKCDVYSFGVVALEVLMGSHP 712
+ D ++ GV+ E+ G P
Sbjct: 202 YNKAVDWWALGVLIYEMAAGYPP 224
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 86/203 (42%), Gaps = 18/203 (8%)
Query: 515 CIGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLY 573
+GTG +G V + SG A+K L + + + +E E R+L + +VKL
Sbjct: 48 TLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 574 GFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELD---WTKRVNIVKSMAHALSYLHYDC 630
N ++++ EY+ G +F LR E + ++ + H+L ++ D
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 631 KPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTL-VVGTYGYIAPELAYTMA 689
KP + D V DFG A+ + RT + GT Y+APE+ +
Sbjct: 168 KPENLLIDQQGYIQ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKG 214
Query: 690 VTEKCDVYSFGVVALEVLMGSHP 712
+ D ++ GV+ E+ G P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 86/203 (42%), Gaps = 18/203 (8%)
Query: 515 CIGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLY 573
+GTG +G V + SG A+K L + + + +E E R+L + +VKL
Sbjct: 48 TLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 574 GFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELD---WTKRVNIVKSMAHALSYLHYDC 630
N ++++ EY+ G +F LR E + ++ + H+L ++ D
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 631 KPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTL-VVGTYGYIAPELAYTMA 689
KP + D V DFG A+ + RT + GT Y+APE+ +
Sbjct: 168 KPENLLIDQQGYIQ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKG 214
Query: 690 VTEKCDVYSFGVVALEVLMGSHP 712
+ D ++ GV+ E+ G P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 86/203 (42%), Gaps = 18/203 (8%)
Query: 515 CIGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLY 573
+GTG +G V + SG A+K L + + + +E E R+L + +VKL
Sbjct: 48 TLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 574 GFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELD---WTKRVNIVKSMAHALSYLHYDC 630
N ++++ EY+ G +F LR E + ++ + H+L ++ D
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 631 KPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTL-VVGTYGYIAPELAYTMA 689
KP + D V DFG A+ + RT + GT Y+APE+ +
Sbjct: 168 KPENLIIDQQGYIQ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIIISKG 214
Query: 690 VTEKCDVYSFGVVALEVLMGSHP 712
+ D ++ GV+ E+ G P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 90/217 (41%), Gaps = 22/217 (10%)
Query: 506 ATEDFHIKYCIGTGGYGSVYRAQLSSGKL-------VALKKLHRSETEEPAFLESFQTEA 558
A E + +G G +G VY ++ G + VA+K ++ + + F EA
Sbjct: 16 AREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERI--EFLNEA 72
Query: 559 RLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELD-------WTK 611
++ + ++V+L G + +I E M RG L LR+ +E + +K
Sbjct: 73 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 132
Query: 612 RVNIVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRT 671
+ + +A ++YL+ + VHRD + DFG+ R ++ R
Sbjct: 133 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 189
Query: 672 LVVG--TYGYIAPELAYTMAVTEKCDVYSFGVVALEV 706
G +++PE T DV+SFGVV E+
Sbjct: 190 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 226
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 90/217 (41%), Gaps = 22/217 (10%)
Query: 506 ATEDFHIKYCIGTGGYGSVYRAQLSSGKL-------VALKKLHRSETEEPAFLESFQTEA 558
A E + +G G +G VY ++ G + VA+K ++ + + F EA
Sbjct: 14 AREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERI--EFLNEA 70
Query: 559 RLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELD-------WTK 611
++ + ++V+L G + +I E M RG L LR+ +E + +K
Sbjct: 71 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 130
Query: 612 RVNIVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRT 671
+ + +A ++YL+ + VHRD + DFG+ R ++ R
Sbjct: 131 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 187
Query: 672 LVVG--TYGYIAPELAYTMAVTEKCDVYSFGVVALEV 706
G +++PE T DV+SFGVV E+
Sbjct: 188 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 224
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 87/201 (43%), Gaps = 22/201 (10%)
Query: 516 IGTGGYGSV---YRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKL 572
IG+G G V Y A L VA+KKL R + +++ E L+ + H+NI+ L
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKXVNHKNIISL 88
Query: 573 YGFCLHNKCM------FLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYL 626
K + +L+ E M+ +L V++ +ELD + ++ M + +L
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELMD-ANLXQVIQ-----MELDHERMSYLLYQMLXGIKHL 142
Query: 627 HYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAY 686
H I+HRD + DFGLAR VV Y Y APE+
Sbjct: 143 H---SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRY-YRAPEVIL 198
Query: 687 TMAVTEKCDVYSFGVVALEVL 707
M E D++S G + E++
Sbjct: 199 GMGYKENVDIWSVGCIMGEMV 219
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 86/202 (42%), Gaps = 16/202 (7%)
Query: 515 CIGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLY 573
+GTG +G V + SG A+K L + + + +E E R+L + +VKL
Sbjct: 69 TLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 128
Query: 574 GFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELD---WTKRVNIVKSMAHALSYLHYDC 630
N ++++ EY+ G +F LR E + ++ + H+L ++ D
Sbjct: 129 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 188
Query: 631 KPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYTMAV 690
KP + D V DFG A+ + + TL GT Y+APE+ +
Sbjct: 189 KPENLLIDQQGYIQ---------VTDFGFAKRVK--GATWTL-CGTPEYLAPEIILSKGY 236
Query: 691 TEKCDVYSFGVVALEVLMGSHP 712
+ D ++ GV+ E+ G P
Sbjct: 237 NKAVDWWALGVLIYEMAAGYPP 258
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 90/217 (41%), Gaps = 22/217 (10%)
Query: 506 ATEDFHIKYCIGTGGYGSVYRAQLSSGKL-------VALKKLHRSETEEPAFLESFQTEA 558
A E + +G G +G VY ++ G + VA+K ++ + + F EA
Sbjct: 23 AREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERI--EFLNEA 79
Query: 559 RLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELD-------WTK 611
++ + ++V+L G + +I E M RG L LR+ +E + +K
Sbjct: 80 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 139
Query: 612 RVNIVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRT 671
+ + +A ++YL+ + VHRD + DFG+ R ++ R
Sbjct: 140 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 196
Query: 672 LVVG--TYGYIAPELAYTMAVTEKCDVYSFGVVALEV 706
G +++PE T DV+SFGVV E+
Sbjct: 197 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 233
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 91/217 (41%), Gaps = 22/217 (10%)
Query: 506 ATEDFHIKYCIGTGGYGSVYRAQLSSGKL-------VALKKLHRSETEEPAFLESFQTEA 558
A E + +G G +G VY ++ G + VA+K ++ + + F EA
Sbjct: 10 AREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERI--EFLNEA 66
Query: 559 RLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELD-------WTK 611
++ + ++V+L G + +I E M RG L LR+ +E + +K
Sbjct: 67 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 126
Query: 612 RVNIVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRT 671
+ + +A ++YL+ + VHRD + DFG+ R ++ R
Sbjct: 127 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRK 183
Query: 672 LVVG--TYGYIAPELAYTMAVTEKCDVYSFGVVALEV 706
G +++PE T DV+SFGVV E+
Sbjct: 184 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 220
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 88/217 (40%), Gaps = 22/217 (10%)
Query: 506 ATEDFHIKYCIGTGGYGSVYRAQLSSGKL-------VALKKLHRSETEEPAFLESFQTEA 558
A E + +G G +G VY ++ G + VA+K ++ + + F EA
Sbjct: 23 AREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERI--EFLNEA 79
Query: 559 RLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLR-------NDVEAVELDWTK 611
++ + ++V+L G + +I E M RG L LR N+ +K
Sbjct: 80 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSK 139
Query: 612 RVNIVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRT 671
+ + +A ++YL+ + VHRD + DFG+ R ++ R
Sbjct: 140 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 196
Query: 672 LVVG--TYGYIAPELAYTMAVTEKCDVYSFGVVALEV 706
G +++PE T DV+SFGVV E+
Sbjct: 197 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 233
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 90/217 (41%), Gaps = 22/217 (10%)
Query: 506 ATEDFHIKYCIGTGGYGSVYRAQLSSGKL-------VALKKLHRSETEEPAFLESFQTEA 558
A E + +G G +G VY ++ G + VA+K ++ + + F EA
Sbjct: 45 AREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERI--EFLNEA 101
Query: 559 RLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELD-------WTK 611
++ + ++V+L G + +I E M RG L LR+ +E + +K
Sbjct: 102 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 161
Query: 612 RVNIVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRT 671
+ + +A ++YL+ + VHRD + DFG+ R ++ R
Sbjct: 162 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 218
Query: 672 LVVG--TYGYIAPELAYTMAVTEKCDVYSFGVVALEV 706
G +++PE T DV+SFGVV E+
Sbjct: 219 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 255
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 90/217 (41%), Gaps = 22/217 (10%)
Query: 506 ATEDFHIKYCIGTGGYGSVYRAQLSSGKL-------VALKKLHRSETEEPAFLESFQTEA 558
A E + +G G +G VY ++ G + VA+K ++ + + F EA
Sbjct: 17 AREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERI--EFLNEA 73
Query: 559 RLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELD-------WTK 611
++ + ++V+L G + +I E M RG L LR+ +E + +K
Sbjct: 74 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 133
Query: 612 RVNIVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRT 671
+ + +A ++YL+ + VHRD + DFG+ R ++ R
Sbjct: 134 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 190
Query: 672 LVVG--TYGYIAPELAYTMAVTEKCDVYSFGVVALEV 706
G +++PE T DV+SFGVV E+
Sbjct: 191 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 227
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 90/217 (41%), Gaps = 22/217 (10%)
Query: 506 ATEDFHIKYCIGTGGYGSVYRAQLSSGKL-------VALKKLHRSETEEPAFLESFQTEA 558
A E + +G G +G VY ++ G + VA+K ++ + + F EA
Sbjct: 16 AREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERI--EFLNEA 72
Query: 559 RLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELD-------WTK 611
++ + ++V+L G + +I E M RG L LR+ +E + +K
Sbjct: 73 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 132
Query: 612 RVNIVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRT 671
+ + +A ++YL+ + VHRD + DFG+ R ++ R
Sbjct: 133 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 189
Query: 672 LVVG--TYGYIAPELAYTMAVTEKCDVYSFGVVALEV 706
G +++PE T DV+SFGVV E+
Sbjct: 190 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 226
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 86/203 (42%), Gaps = 18/203 (8%)
Query: 515 CIGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLY 573
+GTG +G V + +G A+K L + + + +E E R+L + +VKL
Sbjct: 41 TLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 100
Query: 574 GFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELD---WTKRVNIVKSMAHALSYLHYDC 630
N ++++ EY+ G +F LR E + ++ + H+L ++ D
Sbjct: 101 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDL 160
Query: 631 KPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTL-VVGTYGYIAPELAYTMA 689
KP + D V DFG A+ + RT + GT Y+APE+ +
Sbjct: 161 KPENLLIDQQGYIQ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKG 207
Query: 690 VTEKCDVYSFGVVALEVLMGSHP 712
+ D ++ GV+ E+ G P
Sbjct: 208 YNKAVDWWALGVLIYEMAAGYPP 230
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 88/217 (40%), Gaps = 22/217 (10%)
Query: 506 ATEDFHIKYCIGTGGYGSVYRAQLSSGKL-------VALKKLHRSETEEPAFLESFQTEA 558
A E + +G G +G VY ++ G + VA+K ++ + + F EA
Sbjct: 13 AREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERI--EFLNEA 69
Query: 559 RLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLR-------NDVEAVELDWTK 611
++ + ++V+L G + +I E M RG L LR N+ +K
Sbjct: 70 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSK 129
Query: 612 RVNIVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRT 671
+ + +A ++YL+ + VHRD + DFG+ R ++ R
Sbjct: 130 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 186
Query: 672 LVVG--TYGYIAPELAYTMAVTEKCDVYSFGVVALEV 706
G +++PE T DV+SFGVV E+
Sbjct: 187 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 223
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 85/203 (41%), Gaps = 18/203 (8%)
Query: 515 CIGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLY 573
+GTG +G V + + +G A+K L + + + +E E R+L + + KL
Sbjct: 49 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLE 108
Query: 574 GFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELD---WTKRVNIVKSMAHALSYLHYDC 630
N ++++ EY G +F LR E + ++ + H+L ++ D
Sbjct: 109 FSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDL 168
Query: 631 KPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTL-VVGTYGYIAPELAYTMA 689
KP + D V DFG A+ + RT + GT Y+APE+ +
Sbjct: 169 KPENLMIDQQGYIK---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKG 215
Query: 690 VTEKCDVYSFGVVALEVLMGSHP 712
+ D ++ GV+ E+ G P
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 99/219 (45%), Gaps = 24/219 (10%)
Query: 508 EDFHIKYCIGTGGYGSVYRA-QLSSGKLVALKKLHR-------SETEEPAFLESFQTEAR 559
+++ + +G+G G V A + + K VA+K + + + +PA + +TE
Sbjct: 16 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPAL--NVETEIE 73
Query: 560 LLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSM 619
+L ++ H I+K+ F + +++ E ME G LF + + E T ++ + M
Sbjct: 74 ILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEA--TCKLYFYQ-M 129
Query: 620 AHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAF---VADFGLARLLHPDSSNRTLVVGT 676
A+ YLH + I+HRD E + DFG +++L S RTL GT
Sbjct: 130 LLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL-CGT 185
Query: 677 YGYIAPELAYTMAVT---EKCDVYSFGVVALEVLMGSHP 712
Y+APE+ ++ D +S GV+ L G P
Sbjct: 186 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 224
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 90/218 (41%), Gaps = 25/218 (11%)
Query: 504 IEATEDFHIKYCIGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLS 562
I+ T+ + +K IG G Y R ++ A+K + +S+ + +E LL
Sbjct: 18 IQFTDGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSKRDPTEEIEI------LLR 71
Query: 563 QIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLF-CVLRN------DVEAVELDWTKRVNI 615
+H NI+ L K ++++ E + G L +LR + AV TK V
Sbjct: 72 YGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKTVEY 131
Query: 616 VKSMAHALSYLHYDCKPS-IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVV 674
+ HA +H D KPS I++ D + DFG A+ L ++
Sbjct: 132 L----HAQGVVHRDLKPSNILYVDESGNPESIR------ICDFGFAKQLRAENGLLXTPC 181
Query: 675 GTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHP 712
T ++APE+ CD++S GV+ L G P
Sbjct: 182 YTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTP 219
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 99/219 (45%), Gaps = 24/219 (10%)
Query: 508 EDFHIKYCIGTGGYGSVYRA-QLSSGKLVALKKLHR-------SETEEPAFLESFQTEAR 559
+++ + +G+G G V A + + K VA+K + + + +PA + +TE
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPAL--NVETEIE 67
Query: 560 LLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSM 619
+L ++ H I+K+ F + +++ E ME G LF + + E T ++ + M
Sbjct: 68 ILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEA--TCKLYFYQ-M 123
Query: 620 AHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAF---VADFGLARLLHPDSSNRTLVVGT 676
A+ YLH + I+HRD E + DFG +++L S RTL GT
Sbjct: 124 LLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL-CGT 179
Query: 677 YGYIAPELAYTMAVT---EKCDVYSFGVVALEVLMGSHP 712
Y+APE+ ++ D +S GV+ L G P
Sbjct: 180 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 218
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 86/203 (42%), Gaps = 18/203 (8%)
Query: 515 CIGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLY 573
+GTG +G V + +G A+K L + + + +E E R+L + +VKL
Sbjct: 48 TLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 574 GFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELD---WTKRVNIVKSMAHALSYLHYDC 630
N ++++ EY+ G +F LR E + ++ + H+L ++ D
Sbjct: 108 YSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 631 KPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTL-VVGTYGYIAPELAYTMA 689
KP + D V DFG A+ + RT + GT Y+APE+ +
Sbjct: 168 KPENLLIDQQGYIQ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKG 214
Query: 690 VTEKCDVYSFGVVALEVLMGSHP 712
+ D ++ GV+ E+ G P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 85/203 (41%), Gaps = 18/203 (8%)
Query: 515 CIGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLY 573
+GTG +G V + + +G A+K L + + + +E E R+L + + KL
Sbjct: 49 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLE 108
Query: 574 GFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELD---WTKRVNIVKSMAHALSYLHYDC 630
N ++++ EY G +F LR E + ++ + H+L ++ D
Sbjct: 109 FSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 168
Query: 631 KPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTL-VVGTYGYIAPELAYTMA 689
KP + D V DFG A+ + RT + GT Y+APE+ +
Sbjct: 169 KPENLMIDQQGYIK---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKG 215
Query: 690 VTEKCDVYSFGVVALEVLMGSHP 712
+ D ++ GV+ E+ G P
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPP 238
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 86/203 (42%), Gaps = 18/203 (8%)
Query: 515 CIGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLY 573
+GTG +G V + +G A+K L + + + +E E R+L + +VKL
Sbjct: 41 TLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 100
Query: 574 GFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELD---WTKRVNIVKSMAHALSYLHYDC 630
N ++++ EY+ G +F LR E + ++ + H+L ++ D
Sbjct: 101 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 160
Query: 631 KPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTL-VVGTYGYIAPELAYTMA 689
KP + D V DFG A+ + RT + GT Y+APE+ +
Sbjct: 161 KPENLLIDQQGYIQ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKG 207
Query: 690 VTEKCDVYSFGVVALEVLMGSHP 712
+ D ++ GV+ E+ G P
Sbjct: 208 YNKAVDWWALGVLIYEMAAGYPP 230
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 86/203 (42%), Gaps = 18/203 (8%)
Query: 515 CIGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLY 573
+GTG +G V + +G A+K L + + + +E E R+L + +VKL
Sbjct: 69 TLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 128
Query: 574 GFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELD---WTKRVNIVKSMAHALSYLHYDC 630
N ++++ EY+ G +F LR E + ++ + H+L ++ D
Sbjct: 129 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 188
Query: 631 KPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTL-VVGTYGYIAPELAYTMA 689
KP + D V DFG A+ + RT + GT Y+APE+ +
Sbjct: 189 KPENLLIDQQGYIQ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKG 235
Query: 690 VTEKCDVYSFGVVALEVLMGSHP 712
+ D ++ GV+ E+ G P
Sbjct: 236 YNKAVDWWALGVLIYEMAAGYPP 258
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 99/219 (45%), Gaps = 24/219 (10%)
Query: 508 EDFHIKYCIGTGGYGSVYRA-QLSSGKLVALKKLHR-------SETEEPAFLESFQTEAR 559
+++ + +G+G G V A + + K VA+K + + + +PA + +TE
Sbjct: 9 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPAL--NVETEIE 66
Query: 560 LLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSM 619
+L ++ H I+K+ F + +++ E ME G LF + + E T ++ + M
Sbjct: 67 ILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEA--TCKLYFYQ-M 122
Query: 620 AHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAF---VADFGLARLLHPDSSNRTLVVGT 676
A+ YLH + I+HRD E + DFG +++L S RTL GT
Sbjct: 123 LLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL-CGT 178
Query: 677 YGYIAPELAYTMAVT---EKCDVYSFGVVALEVLMGSHP 712
Y+APE+ ++ D +S GV+ L G P
Sbjct: 179 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 217
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 86/203 (42%), Gaps = 18/203 (8%)
Query: 515 CIGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLY 573
+GTG +G V + +G A+K L + + + +E E R+L + +VKL
Sbjct: 48 TLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 574 GFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELD---WTKRVNIVKSMAHALSYLHYDC 630
N ++++ EY+ G +F LR E + ++ + H+L ++ D
Sbjct: 108 YSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 631 KPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTL-VVGTYGYIAPELAYTMA 689
KP + D V DFG A+ + RT + GT Y+APE+ +
Sbjct: 168 KPENLLIDQQGYIQ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKG 214
Query: 690 VTEKCDVYSFGVVALEVLMGSHP 712
+ D ++ GV+ E+ G P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 99/219 (45%), Gaps = 24/219 (10%)
Query: 508 EDFHIKYCIGTGGYGSVYRA-QLSSGKLVALKKLHR-------SETEEPAFLESFQTEAR 559
+++ + +G+G G V A + + K VA+K + + + +PA + +TE
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPAL--NVETEIE 67
Query: 560 LLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSM 619
+L ++ H I+K+ F + +++ E ME G LF + + E T ++ + M
Sbjct: 68 ILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEA--TCKLYFYQ-M 123
Query: 620 AHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAF---VADFGLARLLHPDSSNRTLVVGT 676
A+ YLH + I+HRD E + DFG +++L S RTL GT
Sbjct: 124 LLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL-CGT 179
Query: 677 YGYIAPELAYTMAVT---EKCDVYSFGVVALEVLMGSHP 712
Y+APE+ ++ D +S GV+ L G P
Sbjct: 180 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 218
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 85/205 (41%), Gaps = 21/205 (10%)
Query: 515 CIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
IG G +G V++A+L VA+KK+ + + + E +++ ++H N+V L
Sbjct: 47 VIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFK-------NRELQIMRIVKHPNVVDLKA 99
Query: 575 FCLHNK------CMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVK-SMAHALSYLH 627
F N + L+ EY+ V R +L T + ++K M L L
Sbjct: 100 FFYSNGDKKDEVFLNLVLEYVPE----TVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLA 155
Query: 628 YDCKPSIVHRDXXXXXXXXXXXXEAF-VADFGLARLLHPDSSNRTLVVGTYGYIAPELAY 686
Y I HRD + DFG A++L N + + Y Y APEL +
Sbjct: 156 YIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSRY-YRAPELIF 214
Query: 687 TMA-VTEKCDVYSFGVVALEVLMGS 710
T D++S G V E++ G
Sbjct: 215 GATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 86/203 (42%), Gaps = 18/203 (8%)
Query: 515 CIGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLY 573
+GTG +G V + +G A+K L + + + +E E R+L + +VKL
Sbjct: 48 TLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 574 GFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELD---WTKRVNIVKSMAHALSYLHYDC 630
N ++++ EY+ G +F LR E + ++ + H+L ++ D
Sbjct: 108 YSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 631 KPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTL-VVGTYGYIAPELAYTMA 689
KP + D V DFG A+ + RT + GT Y+APE+ +
Sbjct: 168 KPENLLIDQQGYIQ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKG 214
Query: 690 VTEKCDVYSFGVVALEVLMGSHP 712
+ D ++ GV+ E+ G P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 85/203 (41%), Gaps = 18/203 (8%)
Query: 515 CIGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLY 573
+GTG +G V + + +G A+K L + + + +E E R+L + + KL
Sbjct: 49 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLE 108
Query: 574 GFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELD---WTKRVNIVKSMAHALSYLHYDC 630
N ++++ EY G +F LR E + ++ + H+L ++ D
Sbjct: 109 FSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 168
Query: 631 KPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTL-VVGTYGYIAPELAYTMA 689
KP + D V DFG A+ + RT + GT Y+APE+ +
Sbjct: 169 KPENLMIDQQGYIK---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKG 215
Query: 690 VTEKCDVYSFGVVALEVLMGSHP 712
+ D ++ GV+ E+ G P
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 86/203 (42%), Gaps = 18/203 (8%)
Query: 515 CIGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLY 573
+GTG +G V + +G A+K L + + + +E E R+L + +VKL
Sbjct: 49 TLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 108
Query: 574 GFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELD---WTKRVNIVKSMAHALSYLHYDC 630
N ++++ EY+ G +F LR E + ++ + H+L ++ D
Sbjct: 109 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 168
Query: 631 KPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTL-VVGTYGYIAPELAYTMA 689
KP + D V DFG A+ + RT + GT Y+APE+ +
Sbjct: 169 KPENLLIDQQGYIQ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKG 215
Query: 690 VTEKCDVYSFGVVALEVLMGSHP 712
+ D ++ GV+ E+ G P
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 90/202 (44%), Gaps = 20/202 (9%)
Query: 516 IGTGGYGSVYRAQLSSGKL-VALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
IG G YG V A K VA+KK+ S E + + E ++L + RH N++ +
Sbjct: 51 IGEGAYGMVSSAYDHVRKTRVAIKKI--SPFEHQTYCQRTLREIQILLRFRHENVIGIRD 108
Query: 575 FCLHN-----KCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYD 629
+ + ++++ + ME L+ +L++ +L + + L Y+H
Sbjct: 109 ILRASTLEAMRDVYIVQDLME-TDLYKLLKSQ----QLSNDHICYFLYQILRGLKYIH-- 161
Query: 630 CKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNR---TLVVGTYGYIAPELAY 686
+++HRD + + DFGLAR+ P+ + T V T Y APE+
Sbjct: 162 -SANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIML 220
Query: 687 -TMAVTEKCDVYSFGVVALEVL 707
+ T+ D++S G + E+L
Sbjct: 221 NSKGYTKSIDIWSVGCILAEML 242
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 99/219 (45%), Gaps = 24/219 (10%)
Query: 508 EDFHIKYCIGTGGYGSVYRA-QLSSGKLVALKKLHR-------SETEEPAFLESFQTEAR 559
+++ + +G+G G V A + + K VA+K + + + +PA + +TE
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPAL--NVETEIE 67
Query: 560 LLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSM 619
+L ++ H I+K+ F + +++ E ME G LF + + E T ++ + M
Sbjct: 68 ILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEA--TCKLYFYQ-M 123
Query: 620 AHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAF---VADFGLARLLHPDSSNRTLVVGT 676
A+ YLH + I+HRD E + DFG +++L S RTL GT
Sbjct: 124 LLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL-CGT 179
Query: 677 YGYIAPELAYTMAVT---EKCDVYSFGVVALEVLMGSHP 712
Y+APE+ ++ D +S GV+ L G P
Sbjct: 180 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 218
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 87/201 (43%), Gaps = 22/201 (10%)
Query: 516 IGTGGYGSV---YRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKL 572
IG+G G V Y A L VA+KKL R + +++ E L+ + H+NI+ L
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKXVNHKNIISL 88
Query: 573 YGFCLHNKCM------FLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYL 626
K + +L+ E M+ +L V++ +ELD + ++ M + +L
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELMD-ANLXQVIQ-----MELDHERMSYLLYQMLCGIKHL 142
Query: 627 HYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAY 686
H I+HRD + DFGLAR VV Y Y APE+
Sbjct: 143 H---SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRY-YRAPEVIL 198
Query: 687 TMAVTEKCDVYSFGVVALEVL 707
M E D++S G + E++
Sbjct: 199 GMGYKENVDIWSVGCIMGEMV 219
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 86/203 (42%), Gaps = 18/203 (8%)
Query: 515 CIGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLY 573
+GTG +G V + +G A+K L + + + +E E R+L + +VKL
Sbjct: 49 TLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 108
Query: 574 GFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELD---WTKRVNIVKSMAHALSYLHYDC 630
N ++++ EY+ G +F LR E + ++ + H+L ++ D
Sbjct: 109 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 168
Query: 631 KPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTL-VVGTYGYIAPELAYTMA 689
KP + D V DFG A+ + RT + GT Y+APE+ +
Sbjct: 169 KPENLLIDQQGYIQ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKG 215
Query: 690 VTEKCDVYSFGVVALEVLMGSHP 712
+ D ++ GV+ E+ G P
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 84/201 (41%), Gaps = 22/201 (10%)
Query: 516 IGTGGYGSV---YRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKL 572
IG+G G V Y A L VA+KKL R + +++ E L+ + H+NI+ L
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKXVNHKNIISL 88
Query: 573 YGFCLHNKCM------FLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYL 626
K + +L+ E M+ C V +ELD + ++ M + +L
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELMDAN--LC----QVIQMELDHERMSYLLYQMLCGIKHL 142
Query: 627 HYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAY 686
H I+HRD + DFGLAR VV Y Y APE+
Sbjct: 143 H---SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRY-YRAPEVIL 198
Query: 687 TMAVTEKCDVYSFGVVALEVL 707
M E D++S G + E++
Sbjct: 199 GMGYKENVDIWSVGCIMGEMV 219
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 87/201 (43%), Gaps = 22/201 (10%)
Query: 516 IGTGGYGSV---YRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKL 572
IG+G G V Y A L VA+KKL R + +++ E L+ + H+NI+ L
Sbjct: 25 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISL 81
Query: 573 YGFCLHNKCM------FLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYL 626
K + +L+ E M+ +L V++ +ELD + ++ M + +L
Sbjct: 82 LNVFTPQKTLEEFQDVYLVMELMD-ANLXQVIQ-----MELDHERMSYLLYQMLXGIKHL 135
Query: 627 HYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAY 686
H I+HRD + DFGLAR VV Y Y APE+
Sbjct: 136 H---SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRY-YRAPEVIL 191
Query: 687 TMAVTEKCDVYSFGVVALEVL 707
M E D++S G + E++
Sbjct: 192 GMGYKENVDIWSVGCIMGEMV 212
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 87/201 (43%), Gaps = 22/201 (10%)
Query: 516 IGTGGYGSV---YRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKL 572
IG+G G V Y A L VA+KKL R + +++ E L+ + H+NI+ L
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISL 88
Query: 573 YGFCLHNKCM------FLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYL 626
K + +L+ E M+ +L V++ +ELD + ++ M + +L
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELMD-ANLXQVIQ-----MELDHERMSYLLYQMLXGIKHL 142
Query: 627 HYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAY 686
H I+HRD + DFGLAR VV Y Y APE+
Sbjct: 143 H---SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRY-YRAPEVIL 198
Query: 687 TMAVTEKCDVYSFGVVALEVL 707
M E D++S G + E++
Sbjct: 199 GMGYKENVDIWSVGCIMGEMV 219
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 87/203 (42%), Gaps = 22/203 (10%)
Query: 516 IGTGGYGSV---YRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKL 572
IG+G G V Y A L VA+KKL R + +++ E L+ + H+NI+ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKVVNHKNIIGL 88
Query: 573 YGFCLHNKCM------FLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYL 626
K + +++ E M+ +L V++ +ELD + ++ M + +L
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMD-ANLSQVIQ-----MELDHERMSYLLYQMLCGIKHL 142
Query: 627 HYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAY 686
H I+HRD + DFGLAR VV Y Y APE+
Sbjct: 143 H---SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRY-YRAPEVIL 198
Query: 687 TMAVTEKCDVYSFGVVALEVLMG 709
M E D++S G + E++ G
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 86/203 (42%), Gaps = 18/203 (8%)
Query: 515 CIGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLY 573
+GTG +G V + +G A+K L + + + +E E R+L + +VKL
Sbjct: 49 TLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 108
Query: 574 GFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELD---WTKRVNIVKSMAHALSYLHYDC 630
N ++++ EY+ G +F LR E + ++ + H+L ++ D
Sbjct: 109 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 168
Query: 631 KPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTL-VVGTYGYIAPELAYTMA 689
KP + D V DFG A+ + RT + GT Y+APE+ +
Sbjct: 169 KPENLLIDQQGYIQ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKG 215
Query: 690 VTEKCDVYSFGVVALEVLMGSHP 712
+ D ++ GV+ E+ G P
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 86/203 (42%), Gaps = 18/203 (8%)
Query: 515 CIGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLY 573
+GTG +G V + SG A+K L + + + +E E R+L + +VKL
Sbjct: 48 TLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 574 GFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELD---WTKRVNIVKSMAHALSYLHYDC 630
N ++++ EY+ G +F LR E + ++ + H+L ++ D
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 631 KPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTL-VVGTYGYIAPELAYTMA 689
KP + D V DFG A+ + RT + GT Y+APE+ +
Sbjct: 168 KPENLLIDQQGYIQ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKG 214
Query: 690 VTEKCDVYSFGVVALEVLMGSHP 712
+ D ++ GV+ ++ G P
Sbjct: 215 YNKAVDWWALGVLIYQMAAGYPP 237
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 87/203 (42%), Gaps = 22/203 (10%)
Query: 516 IGTGGYGSV---YRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKL 572
IG+G G V Y A L VA+KKL R + +++ E L+ + H+NI+ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKVVNHKNIIGL 88
Query: 573 YGFCLHNKCM------FLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYL 626
K + +++ E M+ +L V++ +ELD + ++ M + +L
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMD-ANLSQVIQ-----MELDHERMSYLLYQMLVGIKHL 142
Query: 627 HYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAY 686
H I+HRD + DFGLAR VV Y Y APE+
Sbjct: 143 H---SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRY-YRAPEVIL 198
Query: 687 TMAVTEKCDVYSFGVVALEVLMG 709
M E D++S G + E++ G
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 84/203 (41%), Gaps = 22/203 (10%)
Query: 516 IGTGGYGSV---YRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKL 572
IG+G G V Y A L VA+KKL R + +++ E L+ + H+NI+ L
Sbjct: 34 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGL 90
Query: 573 YGFCLHNKCM------FLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYL 626
K + +++ E M+ C V +ELD + ++ M + +L
Sbjct: 91 LNVFTPQKSLEEFQDVYIVMELMDAN--LC----QVIQMELDHERMSYLLYQMLCGIKHL 144
Query: 627 HYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAY 686
H I+HRD + DFGLAR VV Y Y APE+
Sbjct: 145 H---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPFVVTRY-YRAPEVIL 200
Query: 687 TMAVTEKCDVYSFGVVALEVLMG 709
M E D++S G + E++ G
Sbjct: 201 GMGYKENVDIWSVGCIMGEMIKG 223
>pdb|1P8T|A Chain A, Crystal Structure Of Nogo-66 Receptor
Length = 285
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 75/185 (40%), Gaps = 1/185 (0%)
Query: 110 EFGNLKDLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLSLN-QLSGRLPQEVGNLKNLKSL 168
F ++L L L N L + ++ L L LDLS N QL P L L +L
Sbjct: 50 SFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTL 109
Query: 169 FLDNNHLSGPIPSTLYHLNQLATLCLGYNKLVGPVTKEVGNMKNLDRLHLNGNNLTGSIP 228
LD L P L L L L N L ++ NL L L+GN ++
Sbjct: 110 HLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPE 169
Query: 229 STIGYLNLLDELHLSHNRLDGPIPPTIGNLTNLIALDLSSNQLSGLLPREVGNLKYLASL 288
L+ LD L L NR+ P +L L+ L L +N LS L + L+ L L
Sbjct: 170 RAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYL 229
Query: 289 SLNGN 293
LN N
Sbjct: 230 RLNDN 234
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 70/188 (37%), Gaps = 1/188 (0%)
Query: 14 NFTCFPNLVTFRIWGTLLSGRMPSEIGALSKLEKLVLSHNS-LTGRIPSEIGALSRLKVL 72
+F NL + +L+ + L+ LE+L LS N+ L P+ L RL L
Sbjct: 50 SFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTL 109
Query: 73 DLSYNRLTGTIPSEXXXXXXXXXXXXXXXXXXXXXPLEFGNLKDLDQLRLQGNKLDGLIP 132
L L P F +L +L L L GN++ +
Sbjct: 110 HLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPE 169
Query: 133 SSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNLKSLFLDNNHLSGPIPSTLYHLNQLATL 192
+ L +L L L N+++ P +L L +L+L N+LS L L L L
Sbjct: 170 RAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYL 229
Query: 193 CLGYNKLV 200
L N V
Sbjct: 230 RLNDNPWV 237
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 85/203 (41%), Gaps = 18/203 (8%)
Query: 515 CIGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLY 573
+GTG +G V + +G A+K L + + + +E E R+L + +VKL
Sbjct: 49 TLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 108
Query: 574 GFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELD---WTKRVNIVKSMAHALSYLHYDC 630
N ++++ EY G +F LR E + ++ + H+L ++ D
Sbjct: 109 FSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 168
Query: 631 KPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTL-VVGTYGYIAPELAYTMA 689
KP + D V DFG A+ + RT + GT Y+APE+ +
Sbjct: 169 KPENLMIDQQGYIK---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKG 215
Query: 690 VTEKCDVYSFGVVALEVLMGSHP 712
+ D ++ GV+ E+ G P
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2O6Q|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors A29
Length = 270
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 84/189 (44%), Gaps = 6/189 (3%)
Query: 35 MPSEIGALSKLEKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTGTIPSEXXXXXXXX 94
+PS I A +K KL L N L+ L++L++L L+ N+L T+P+
Sbjct: 31 IPSNIPADTK--KLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQ-TLPAGIFKELKNL 87
Query: 95 XXXXXXXXXXXXXPLE-FGNLKDLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLSLNQLSG 153
P+ F L +L +LRL N+L L P +LT LTYL L N+L
Sbjct: 88 ETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQS 147
Query: 154 RLPQEV-GNLKNLKSLFLDNNHLSGPIPSTLYHLNQLATLCLGYNKLVGPVTKEVGNMKN 212
LP+ V L +LK L L NN L L +L TL L N+L +++
Sbjct: 148 -LPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEK 206
Query: 213 LDRLHLNGN 221
L L L N
Sbjct: 207 LKMLQLQEN 215
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 76/179 (42%), Gaps = 2/179 (1%)
Query: 116 DLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEV-GNLKNLKSLFLDNNH 174
D +L LQ NKL L + LT L L L+ N+L LP + LKNL++L++ +N
Sbjct: 38 DTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQ-TLPAGIFKELKNLETLWVTDNK 96
Query: 175 LSGPIPSTLYHLNQLATLCLGYNKLVGPVTKEVGNMKNLDRLHLNGNNLTGSIPSTIGYL 234
L L LA L L N+L + ++ L L L N L L
Sbjct: 97 LQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKL 156
Query: 235 NLLDELHLSHNRLDGPIPPTIGNLTNLIALDLSSNQLSGLLPREVGNLKYLASLSLNGN 293
L EL L +N+L LT L L L +NQL + +L+ L L L N
Sbjct: 157 TSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQEN 215
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 67/165 (40%), Gaps = 2/165 (1%)
Query: 131 IPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNLKSLFLDNNHLSGPIPSTLYHLNQLA 190
IPS+I + LDL N+LS + L L+ L+L++N L L L
Sbjct: 31 IPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLE 88
Query: 191 TLCLGYNKLVGPVTKEVGNMKNLDRLHLNGNNLTGSIPSTIGYLNLLDELHLSHNRLDGP 250
TL + NKL + NL L L+ N L P L L L L +N L
Sbjct: 89 TLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSL 148
Query: 251 IPPTIGNLTNLIALDLSSNQLSGLLPREVGNLKYLASLSLNGNIL 295
LT+L L L +NQL + L L +L L+ N L
Sbjct: 149 PKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQL 193
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 83/220 (37%), Gaps = 29/220 (13%)
Query: 51 SHNSLTGRIPSEIGALSRLKVLDLSYNRLTGTIPSEXXXXXXXXXXXXXXXXXXXXXPLE 110
S LT IPS I A + K LDL N+L+ ++PS+
Sbjct: 24 SSKKLTA-IPSNIPADT--KKLDLQSNKLS-SLPSKA----------------------- 56
Query: 111 FGNLKDLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEV-GNLKNLKSLF 169
F L L L L NKL L L NL L ++ N+L LP V L NL L
Sbjct: 57 FHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQA-LPIGVFDQLVNLAELR 115
Query: 170 LDNNHLSGPIPSTLYHLNQLATLCLGYNKLVGPVTKEVGNMKNLDRLHLNGNNLTGSIPS 229
LD N L P L +L L LGYN+L + +L L L N L
Sbjct: 116 LDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEG 175
Query: 230 TIGYLNLLDELHLSHNRLDGPIPPTIGNLTNLIALDLSSN 269
L L L L +N+L +L L L L N
Sbjct: 176 AFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQEN 215
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 85/205 (41%), Gaps = 23/205 (11%)
Query: 516 IGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARL-LSQIRHRNIVKLY 573
+G G +G V+R + +G A+KK+ LE F+ E + + + IV LY
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKVR---------LEVFRVEELVACAGLSSPRIVPLY 116
Query: 574 GFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPS 633
G + + E +E GSL +++ ++ + + AL L Y
Sbjct: 117 GAVREGPWVNIFMELLEGGSLGQLIK------QMGCLPEDRALYYLGQALEGLEYLHTRR 170
Query: 634 IVHRDXXXX-XXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTY-----GYIAPELAYT 687
I+H D A + DFG A L PD ++L+ G Y ++APE+
Sbjct: 171 ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMG 230
Query: 688 MAVTEKCDVYSFGVVALEVLMGSHP 712
K D++S + L +L G HP
Sbjct: 231 KPCDAKVDIWSSCCMMLHMLNGCHP 255
>pdb|1XCD|A Chain A, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 1
pdb|1XEC|A Chain A, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 2
pdb|1XEC|B Chain B, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 2
Length = 329
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 93/207 (44%), Gaps = 27/207 (13%)
Query: 110 EFGNLKDLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNLKSLF 169
+F NLK+L L L NK+ + P + L L L LS NQL LP+++ K L+ L
Sbjct: 71 DFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMP--KTLQELR 127
Query: 170 LDNNHLSGPIPSTLYHLNQLATLCLGYNKLVGP-----------------------VTKE 206
+ N ++ S LNQ+ + LG N L T
Sbjct: 128 VHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIP 187
Query: 207 VGNMKNLDRLHLNGNNLTGSIPSTIGYLNLLDELHLSHNRLDGPIPPTIGNLTNLIALDL 266
G +L LHL+GN +T +++ LN L +L LS N + ++ N +L L L
Sbjct: 188 QGLPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHL 247
Query: 267 SSNQLSGLLPREVGNLKYLASLSLNGN 293
++N+L +P + + KY+ + L+ N
Sbjct: 248 NNNKLVK-VPGGLADHKYIQVVYLHNN 273
Score = 37.7 bits (86), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 76/200 (38%), Gaps = 50/200 (25%)
Query: 144 LDLSLNQLSGRLPQEVGNLKNLKSLFLDNNHLSGPIPSTLYHLNQLATLCLGYNKL---- 199
LDL N+++ + NLKNL +L L NN +S P L +L L L N+L
Sbjct: 57 LDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKELP 116
Query: 200 ----------------VGPVTKEVGN---------------------------MKNLDRL 216
+ V K V N MK L +
Sbjct: 117 EKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYI 176
Query: 217 HLNGNNLTGSIPSTIGYLNLLDELHLSHNRLDGPIPPTIGNLTNLIALDLSSNQLSGLLP 276
+ N+T +IP G L ELHL N++ ++ L NL L LS N +S +
Sbjct: 177 RIADTNIT-TIPQ--GLPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDN 233
Query: 277 REVGNLKYLASLSLNGNILI 296
+ N +L L LN N L+
Sbjct: 234 GSLANTPHLRELHLNNNKLV 253
Score = 36.2 bits (82), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 86/210 (40%), Gaps = 9/210 (4%)
Query: 42 LSKLEKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTGTIPSEXXXXXXXXXXXXXXX 101
L L L+L +N ++ P L +L+ L LS N+L +P +
Sbjct: 75 LKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMPKTLQELRVHENEI 133
Query: 102 XXXXXXPLEFGNLKDLDQLRLQGNKL--DGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEV 159
F L + + L N L G+ + + L+Y+ ++ ++ +PQ
Sbjct: 134 TKVRKS--VFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQ-- 188
Query: 160 GNLKNLKSLFLDNNHLSGPIPSTLYHLNQLATLCLGYNKLVGPVTKEVGNMKNLDRLHLN 219
G +L L LD N ++ ++L LN LA L L +N + + N +L LHLN
Sbjct: 189 GLPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLN 248
Query: 220 GNNLTGSIPSTIGYLNLLDELHLSHNRLDG 249
N L +P + + ++L +N +
Sbjct: 249 NNKLV-KVPGGLADHKYIQVVYLHNNNISA 277
>pdb|1XKU|A Chain A, Crystal Structure Of The Dimeric Protein Core Of Decorin,
The Archetypal Small Leucine-Rich Repeat Proteoglycan
Length = 330
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 93/207 (44%), Gaps = 27/207 (13%)
Query: 110 EFGNLKDLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNLKSLF 169
+F NLK+L L L NK+ + P + L L L LS NQL LP+++ K L+ L
Sbjct: 71 DFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMP--KTLQELR 127
Query: 170 LDNNHLSGPIPSTLYHLNQLATLCLGYNKLVGP-----------------------VTKE 206
+ N ++ S LNQ+ + LG N L T
Sbjct: 128 VHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIP 187
Query: 207 VGNMKNLDRLHLNGNNLTGSIPSTIGYLNLLDELHLSHNRLDGPIPPTIGNLTNLIALDL 266
G +L LHL+GN +T +++ LN L +L LS N + ++ N +L L L
Sbjct: 188 QGLPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHL 247
Query: 267 SSNQLSGLLPREVGNLKYLASLSLNGN 293
++N+L +P + + KY+ + L+ N
Sbjct: 248 NNNKLVK-VPGGLADHKYIQVVYLHNN 273
Score = 37.7 bits (86), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 76/200 (38%), Gaps = 50/200 (25%)
Query: 144 LDLSLNQLSGRLPQEVGNLKNLKSLFLDNNHLSGPIPSTLYHLNQLATLCLGYNKL---- 199
LDL N+++ + NLKNL +L L NN +S P L +L L L N+L
Sbjct: 57 LDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKELP 116
Query: 200 ----------------VGPVTKEVGN---------------------------MKNLDRL 216
+ V K V N MK L +
Sbjct: 117 EKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYI 176
Query: 217 HLNGNNLTGSIPSTIGYLNLLDELHLSHNRLDGPIPPTIGNLTNLIALDLSSNQLSGLLP 276
+ N+T +IP G L ELHL N++ ++ L NL L LS N +S +
Sbjct: 177 RIADTNIT-TIPQ--GLPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDN 233
Query: 277 REVGNLKYLASLSLNGNILI 296
+ N +L L LN N L+
Sbjct: 234 GSLANTPHLRELHLNNNKLV 253
Score = 36.2 bits (82), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 86/210 (40%), Gaps = 9/210 (4%)
Query: 42 LSKLEKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTGTIPSEXXXXXXXXXXXXXXX 101
L L L+L +N ++ P L +L+ L LS N+L +P +
Sbjct: 75 LKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMPKTLQELRVHENEI 133
Query: 102 XXXXXXPLEFGNLKDLDQLRLQGNKL--DGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEV 159
F L + + L N L G+ + + L+Y+ ++ ++ +PQ
Sbjct: 134 TKVRKS--VFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQ-- 188
Query: 160 GNLKNLKSLFLDNNHLSGPIPSTLYHLNQLATLCLGYNKLVGPVTKEVGNMKNLDRLHLN 219
G +L L LD N ++ ++L LN LA L L +N + + N +L LHLN
Sbjct: 189 GLPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLN 248
Query: 220 GNNLTGSIPSTIGYLNLLDELHLSHNRLDG 249
N L +P + + ++L +N +
Sbjct: 249 NNKLV-KVPGGLADHKYIQVVYLHNNNISA 277
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 90/215 (41%), Gaps = 21/215 (9%)
Query: 516 IGTGGYGSVYRA------QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHR-N 568
+G G +G V A + ++ + VA+K L T + +E ++L I H N
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEH--RALMSELKILIHIGHHLN 92
Query: 569 IVKLYGFCLH-NKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSY-- 625
+V L G C + +I E+ + G+L LR+ + + ++ H + Y
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEF-VPYKDLYKDFLTLEHLIXYSF 151
Query: 626 -----LHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLH--PDSSNRTLVVGTYG 678
+ + +HRD + DFGLAR ++ PD +
Sbjct: 152 QVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLK 211
Query: 679 YIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHP 712
++APE + T + DV+SFGV+ E+ +G+ P
Sbjct: 212 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 246
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 96/205 (46%), Gaps = 22/205 (10%)
Query: 516 IGTGGYGSVYRAQL-SSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
IG G +G VY+A+L SG+LVA+KK+ + + AF E +++ ++ H NIV+L
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGK----AFKNR---ELQIMRKLDHCNIVRLRY 80
Query: 575 FCLHNK------CMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNI-VKSMAHALSYLH 627
F + + L+ +Y+ +++ V R+ A + V + + + +L+Y+H
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVP-ATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 628 YDCKPSIVHRDXXXXXXXXXXXXEAF-VADFGLARLLHPDSSNRTLVVGTYGYIAPELAY 686
I HRD + DFG A+ L N + + Y Y APEL +
Sbjct: 140 ---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPELIF 195
Query: 687 -TMAVTEKCDVYSFGVVALEVLMGS 710
T DV+S G V E+L+G
Sbjct: 196 GATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 85/205 (41%), Gaps = 23/205 (11%)
Query: 516 IGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARL-LSQIRHRNIVKLY 573
+G G +G V+R + +G A+KK+ LE F+ E + + + IV LY
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKVR---------LEVFRVEELVACAGLSSPRIVPLY 132
Query: 574 GFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPS 633
G + + E +E GSL +++ ++ + + AL L Y
Sbjct: 133 GAVREGPWVNIFMELLEGGSLGQLIK------QMGCLPEDRALYYLGQALEGLEYLHTRR 186
Query: 634 IVHRDXXXX-XXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTY-----GYIAPELAYT 687
I+H D A + DFG A L PD ++L+ G Y ++APE+
Sbjct: 187 ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMG 246
Query: 688 MAVTEKCDVYSFGVVALEVLMGSHP 712
K D++S + L +L G HP
Sbjct: 247 KPCDAKVDIWSSCCMMLHMLNGCHP 271
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 109/264 (41%), Gaps = 18/264 (6%)
Query: 508 EDFHIKY-CIGTGGYGSVYRAQL-SSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIR 565
ED+ + + +G GG+G V+ Q+ ++GKL A KKL++ ++ + E ++L+++
Sbjct: 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVH 243
Query: 566 HRNIVKLYGFCLHNKC-MFLIYEYMERGSL-FCVLRNDVEAVELDWTKRVNIVKSMAHAL 623
R IV L + K + L+ M G + + + D + + + + L
Sbjct: 244 SRFIVSL-AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGL 302
Query: 624 SYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPE 683
+LH + +I++RD ++D GLA L + GT G++APE
Sbjct: 303 EHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPE 359
Query: 684 LAYTMAVTEKCDVYSFGVVALEVLMGSHPTDXXXXXXXXXGRKISQNP---RLDLQCNAY 740
L D ++ GV E++ P G K+ R+ Q Y
Sbjct: 360 LLLGEEYDFSVDYFALGVTLYEMIAARGP-------FRARGEKVENKELKQRVLEQAVTY 412
Query: 741 LKNFSQGNHRWENLLFKKFPYQNL 764
FS + + L +K P + L
Sbjct: 413 PDKFSPASKDFCEALLQKDPEKRL 436
>pdb|1OZN|A Chain A, 1.5a Crystal Structure Of The Nogo Receptor Ligand Binding
Domain Reveals A Convergent Recognition Scaffold
Mediating Inhibition Of Myelination
Length = 285
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 75/185 (40%), Gaps = 1/185 (0%)
Query: 110 EFGNLKDLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLSLN-QLSGRLPQEVGNLKNLKSL 168
F ++L L L N L + ++ L L LDLS N QL P L L +L
Sbjct: 51 SFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTL 110
Query: 169 FLDNNHLSGPIPSTLYHLNQLATLCLGYNKLVGPVTKEVGNMKNLDRLHLNGNNLTGSIP 228
LD L P L L L L N L ++ NL L L+GN ++
Sbjct: 111 HLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPE 170
Query: 229 STIGYLNLLDELHLSHNRLDGPIPPTIGNLTNLIALDLSSNQLSGLLPREVGNLKYLASL 288
L+ LD L L NR+ P +L L+ L L +N LS L + L+ L L
Sbjct: 171 RAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYL 230
Query: 289 SLNGN 293
LN N
Sbjct: 231 RLNDN 235
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 70/188 (37%), Gaps = 1/188 (0%)
Query: 14 NFTCFPNLVTFRIWGTLLSGRMPSEIGALSKLEKLVLSHNS-LTGRIPSEIGALSRLKVL 72
+F NL + +L+ + L+ LE+L LS N+ L P+ L RL L
Sbjct: 51 SFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTL 110
Query: 73 DLSYNRLTGTIPSEXXXXXXXXXXXXXXXXXXXXXPLEFGNLKDLDQLRLQGNKLDGLIP 132
L L P F +L +L L L GN++ +
Sbjct: 111 HLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPE 170
Query: 133 SSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNLKSLFLDNNHLSGPIPSTLYHLNQLATL 192
+ L +L L L N+++ P +L L +L+L N+LS L L L L
Sbjct: 171 RAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYL 230
Query: 193 CLGYNKLV 200
L N V
Sbjct: 231 RLNDNPWV 238
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 87/203 (42%), Gaps = 22/203 (10%)
Query: 516 IGTGGYGSV---YRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKL 572
IG+G G V Y A L VA+KKL R + +++ E L+ + H+NI+ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGL 88
Query: 573 YGFCLHNKCM------FLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYL 626
K + +++ E M+ +L V++ +ELD + ++ M + +L
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMD-ANLSQVIQ-----MELDHERMSYLLYQMLCGIKHL 142
Query: 627 HYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAY 686
H I+HRD + DFGLAR VV Y Y APE+
Sbjct: 143 H---SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRY-YRAPEVIL 198
Query: 687 TMAVTEKCDVYSFGVVALEVLMG 709
M E D++S G + E++ G
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 109/264 (41%), Gaps = 18/264 (6%)
Query: 508 EDFHIKY-CIGTGGYGSVYRAQL-SSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIR 565
ED+ + + +G GG+G V+ Q+ ++GKL A KKL++ ++ + E ++L+++
Sbjct: 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVH 243
Query: 566 HRNIVKLYGFCLHNKC-MFLIYEYMERGSL-FCVLRNDVEAVELDWTKRVNIVKSMAHAL 623
R IV L + K + L+ M G + + + D + + + + L
Sbjct: 244 SRFIVSL-AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGL 302
Query: 624 SYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPE 683
+LH + +I++RD ++D GLA L + GT G++APE
Sbjct: 303 EHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPE 359
Query: 684 LAYTMAVTEKCDVYSFGVVALEVLMGSHPTDXXXXXXXXXGRKISQNP---RLDLQCNAY 740
L D ++ GV E++ P G K+ R+ Q Y
Sbjct: 360 LLLGEEYDFSVDYFALGVTLYEMIAARGP-------FRARGEKVENKELKQRVLEQAVTY 412
Query: 741 LKNFSQGNHRWENLLFKKFPYQNL 764
FS + + L +K P + L
Sbjct: 413 PDKFSPASKDFCEALLQKDPEKRL 436
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 109/264 (41%), Gaps = 18/264 (6%)
Query: 508 EDFHIKY-CIGTGGYGSVYRAQL-SSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIR 565
ED+ + + +G GG+G V+ Q+ ++GKL A KKL++ ++ + E ++L+++
Sbjct: 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVH 243
Query: 566 HRNIVKLYGFCLHNKC-MFLIYEYMERGSL-FCVLRNDVEAVELDWTKRVNIVKSMAHAL 623
R IV L + K + L+ M G + + + D + + + + L
Sbjct: 244 SRFIVSL-AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGL 302
Query: 624 SYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPE 683
+LH + +I++RD ++D GLA L + GT G++APE
Sbjct: 303 EHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPE 359
Query: 684 LAYTMAVTEKCDVYSFGVVALEVLMGSHPTDXXXXXXXXXGRKISQNP---RLDLQCNAY 740
L D ++ GV E++ P G K+ R+ Q Y
Sbjct: 360 LLLGEEYDFSVDYFALGVTLYEMIAARGP-------FRARGEKVENKELKQRVLEQAVTY 412
Query: 741 LKNFSQGNHRWENLLFKKFPYQNL 764
FS + + L +K P + L
Sbjct: 413 PDKFSPASKDFCEALLQKDPEKRL 436
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 89/216 (41%), Gaps = 21/216 (9%)
Query: 516 IGTGGYGSVYRA------QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHR-N 568
+G G +G V A + ++ + VA+K L T + +E ++L I H N
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEH--RALMSELKILIHIGHHLN 94
Query: 569 IVKLYGFCLH-NKCMFLIYEYMERGSLFCVLRNDV-EAVELDWTKRVNIVKSMAHALSY- 625
+V L G C + +I E+ + G+L LR+ E V ++ H + Y
Sbjct: 95 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYS 154
Query: 626 ------LHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLL--HPDSSNRTLVVGTY 677
+ + +HRD + DFGLAR + PD +
Sbjct: 155 FQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPL 214
Query: 678 GYIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHP 712
++APE + T + DV+SFGV+ E+ +G+ P
Sbjct: 215 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 250
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 84/203 (41%), Gaps = 22/203 (10%)
Query: 516 IGTGGYGSV---YRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKL 572
IG+G G V Y A L VA+KKL R + +++ E L+ + H+NI+ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGL 88
Query: 573 YGFCLHNKCM------FLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYL 626
K + +++ E M+ C V +ELD + ++ M + +L
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMDAN--LC----QVIQMELDHERMSYLLYQMLCGIKHL 142
Query: 627 HYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAY 686
H I+HRD + DFGLAR VV Y Y APE+
Sbjct: 143 H---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY-YRAPEVIL 198
Query: 687 TMAVTEKCDVYSFGVVALEVLMG 709
M E D++S G + E++ G
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 84/203 (41%), Gaps = 22/203 (10%)
Query: 516 IGTGGYGSV---YRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKL 572
IG+G G V Y A L VA+KKL R + +++ E L+ + H+NI+ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGL 88
Query: 573 YGFCLHNKCM------FLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYL 626
K + +++ E M+ C V +ELD + ++ M + +L
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMDAN--LC----QVIQMELDHERMSYLLYQMLCGIKHL 142
Query: 627 HYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAY 686
H I+HRD + DFGLAR VV Y Y APE+
Sbjct: 143 H---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY-YRAPEVIL 198
Query: 687 TMAVTEKCDVYSFGVVALEVLMG 709
M E D++S G + E++ G
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKG 221
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 85/205 (41%), Gaps = 23/205 (11%)
Query: 516 IGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARL-LSQIRHRNIVKLY 573
+G G +G V+R + +G A+KK+ LE F+ E + + + IV LY
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKVR---------LEVFRVEELVACAGLSSPRIVPLY 130
Query: 574 GFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPS 633
G + + E +E GSL +++ ++ + + AL L Y
Sbjct: 131 GAVREGPWVNIFMELLEGGSLGQLIK------QMGCLPEDRALYYLGQALEGLEYLHTRR 184
Query: 634 IVHRDXXXX-XXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTY-----GYIAPELAYT 687
I+H D A + DFG A L PD ++L+ G Y ++APE+
Sbjct: 185 ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMG 244
Query: 688 MAVTEKCDVYSFGVVALEVLMGSHP 712
K D++S + L +L G HP
Sbjct: 245 KPCDAKVDIWSSCCMMLHMLNGCHP 269
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 84/203 (41%), Gaps = 22/203 (10%)
Query: 516 IGTGGYGSV---YRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKL 572
IG+G G V Y A L VA+KKL R + +++ E L+ + H+NI+ L
Sbjct: 33 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGL 89
Query: 573 YGFCLHNKCM------FLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYL 626
K + +++ E M+ C V +ELD + ++ M + +L
Sbjct: 90 LNVFTPQKSLEEFQDVYIVMELMDAN--LC----QVIQMELDHERMSYLLYQMLCGIKHL 143
Query: 627 HYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAY 686
H I+HRD + DFGLAR VV Y Y APE+
Sbjct: 144 H---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY-YRAPEVIL 199
Query: 687 TMAVTEKCDVYSFGVVALEVLMG 709
M E D++S G + E++ G
Sbjct: 200 GMGYKENVDIWSVGCIMGEMIKG 222
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 90/215 (41%), Gaps = 21/215 (9%)
Query: 516 IGTGGYGSVYRA------QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHR-N 568
+G G +G V A + ++ + VA+K L T + +E ++L I H N
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEH--RALMSELKILIHIGHHLN 92
Query: 569 IVKLYGFCLH-NKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSY-- 625
+V L G C + +I E+ + G+L LR+ + + ++ H + Y
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEF-VPYKDLYKDFLTLEHLICYSF 151
Query: 626 -----LHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLH--PDSSNRTLVVGTYG 678
+ + +HRD + DFGLAR ++ PD +
Sbjct: 152 QVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 211
Query: 679 YIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHP 712
++APE + T + DV+SFGV+ E+ +G+ P
Sbjct: 212 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 246
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 96/205 (46%), Gaps = 22/205 (10%)
Query: 516 IGTGGYGSVYRAQL-SSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
IG G +G VY+A+L SG+LVA+KK+ + + AF E +++ ++ H NIV+L
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGK----AFKNR---ELQIMRKLDHCNIVRLRY 80
Query: 575 FCLHNK------CMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNI-VKSMAHALSYLH 627
F + + L+ +Y+ +++ V R+ A + V + + + +L+Y+H
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 628 YDCKPSIVHRDXXXXXXXXXXXXEAF-VADFGLARLLHPDSSNRTLVVGTYGYIAPELAY 686
I HRD + DFG A+ L N + + Y Y APEL +
Sbjct: 140 ---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPELIF 195
Query: 687 -TMAVTEKCDVYSFGVVALEVLMGS 710
T DV+S G V E+L+G
Sbjct: 196 GATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 84/203 (41%), Gaps = 22/203 (10%)
Query: 516 IGTGGYGSV---YRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKL 572
IG+G G V Y A L VA+KKL R + +++ E L+ + H+NI+ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGL 88
Query: 573 YGFCLHNKCM------FLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYL 626
K + +++ E M+ C V +ELD + ++ M + +L
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMDAN--LC----QVIQMELDHERMSYLLYQMLCGIKHL 142
Query: 627 HYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAY 686
H I+HRD + DFGLAR VV Y Y APE+
Sbjct: 143 H---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPEVVTRY-YRAPEVIL 198
Query: 687 TMAVTEKCDVYSFGVVALEVLMG 709
M E D++S G + E++ G
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 96/205 (46%), Gaps = 22/205 (10%)
Query: 516 IGTGGYGSVYRAQL-SSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
IG G +G VY+A+L SG+LVA+KK+ + + AF E +++ ++ H NIV+L
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGK----AFKNR---ELQIMRKLDHCNIVRLRY 80
Query: 575 FCLHNK------CMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNI-VKSMAHALSYLH 627
F + + L+ +Y+ +++ V R+ A + V + + + +L+Y+H
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 628 YDCKPSIVHRDXXXXXXXXXXXXEAF-VADFGLARLLHPDSSNRTLVVGTYGYIAPELAY 686
I HRD + DFG A+ L N + + Y Y APEL +
Sbjct: 140 ---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPELIF 195
Query: 687 -TMAVTEKCDVYSFGVVALEVLMGS 710
T DV+S G V E+L+G
Sbjct: 196 GATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 104/230 (45%), Gaps = 28/230 (12%)
Query: 500 FEEMIEATEDFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEAR 559
F+ M + I IG+GG V++ ++ A+K ++ E + L+S++ E
Sbjct: 20 FQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQT-LDSYRNEIA 78
Query: 560 LLSQIRHRN--IVKLYGFCLHNKCMFLIYEYMERG--SLFCVLRNDVEAVELDWTKRVNI 615
L++++ + I++LY + + ++ ++++ ME G L L+ + +D +R +
Sbjct: 79 YLNKLQQHSDKIIRLYDYEITDQYIYMV---MECGNIDLNSWLK---KKKSIDPWERKSY 132
Query: 616 VKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSN--RTLV 673
K+M A+ +H + IVH D + DFG+A + PD+++ +
Sbjct: 133 WKNMLEAVHTIH---QHGIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQ 188
Query: 674 VGTYGYIAPELAYTMAVTEK-----------CDVYSFGVVALEVLMGSHP 712
VGT Y+ PE M+ + + DV+S G + + G P
Sbjct: 189 VGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 238
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 109/264 (41%), Gaps = 18/264 (6%)
Query: 508 EDFHIKY-CIGTGGYGSVYRAQL-SSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIR 565
ED+ + + +G GG+G V+ Q+ ++GKL A KKL++ ++ + E ++L+++
Sbjct: 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVH 243
Query: 566 HRNIVKLYGFCLHNKC-MFLIYEYMERGSL-FCVLRNDVEAVELDWTKRVNIVKSMAHAL 623
R IV L + K + L+ M G + + + D + + + + L
Sbjct: 244 SRFIVSL-AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGL 302
Query: 624 SYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPE 683
+LH + +I++RD ++D GLA L + GT G++APE
Sbjct: 303 EHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPE 359
Query: 684 LAYTMAVTEKCDVYSFGVVALEVLMGSHPTDXXXXXXXXXGRKISQNP---RLDLQCNAY 740
L D ++ GV E++ P G K+ R+ Q Y
Sbjct: 360 LLLGEEYDFSVDYFALGVTLYEMIAARGP-------FRARGEKVENKELKQRVLEQAVTY 412
Query: 741 LKNFSQGNHRWENLLFKKFPYQNL 764
FS + + L +K P + L
Sbjct: 413 PDKFSPASKDFCEALLQKDPEKRL 436
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 98/219 (44%), Gaps = 24/219 (10%)
Query: 508 EDFHIKYCIGTGGYGSVYRA-QLSSGKLVALKKLHR-------SETEEPAFLESFQTEAR 559
+++ + +G+G G V A + + K VA++ + + + +PA + +TE
Sbjct: 149 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPAL--NVETEIE 206
Query: 560 LLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSM 619
+L ++ H I+K+ F + +++ E ME G LF + + E T ++ + M
Sbjct: 207 ILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEA--TCKLYFYQ-M 262
Query: 620 AHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAF---VADFGLARLLHPDSSNRTLVVGT 676
A+ YLH + I+HRD E + DFG +++L S RTL GT
Sbjct: 263 LLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL-CGT 318
Query: 677 YGYIAPELAY---TMAVTEKCDVYSFGVVALEVLMGSHP 712
Y+APE+ T D +S GV+ L G P
Sbjct: 319 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 357
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 91/218 (41%), Gaps = 23/218 (10%)
Query: 516 IGTGGYGSVYRA------QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHR-N 568
+G G +G V A + ++ + VA+K L T + +E ++L I H N
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH--RALMSELKILIHIGHHLN 92
Query: 569 IVKLYGFCLH-NKCMFLIYEYMERGSLFCVLR---NDVEAVELDWTKRVNIVKSMAHALS 624
+V L G C + +I E+ + G+L LR N+ ++ ++ H +
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 152
Query: 625 Y-------LHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLH--PDSSNRTLVVG 675
Y + + +HRD + DFGLAR ++ PD +
Sbjct: 153 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARL 212
Query: 676 TYGYIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHP 712
++APE + T + DV+SFGV+ E+ +G+ P
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 250
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 92/207 (44%), Gaps = 19/207 (9%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEP---AFLESFQTEARLLSQIRHRNIVK 571
+G+G + V + + S+G A K + + T+ E + E +L +I+H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 572 LYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKS---MAHALSYLHY 628
L+ + + LI E + G LF L E + T+ + + + H+L H+
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 629 DCKPS---IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELA 685
D KP ++ R+ + DFGLA + + + + GT ++APE+
Sbjct: 139 DLKPENIMLLDRNVPKPRIK--------IIDFGLAHKIDFGNEFKN-IFGTPAFVAPEIV 189
Query: 686 YTMAVTEKCDVYSFGVVALEVLMGSHP 712
+ + D++S GV+ +L G+ P
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 91/218 (41%), Gaps = 23/218 (10%)
Query: 516 IGTGGYGSVYRA------QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHR-N 568
+G G +G V A + ++ + VA+K L T + +E ++L I H N
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH--RALMSELKILIHIGHHLN 129
Query: 569 IVKLYGFCLH-NKCMFLIYEYMERGSLFCVLR---NDVEAVELDWTKRVNIVKSMAHALS 624
+V L G C + +I E+ + G+L LR N+ ++ ++ H +
Sbjct: 130 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 189
Query: 625 Y-------LHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLH--PDSSNRTLVVG 675
Y + + +HRD + DFGLAR ++ PD +
Sbjct: 190 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 249
Query: 676 TYGYIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHP 712
++APE + T + DV+SFGV+ E+ +G+ P
Sbjct: 250 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 287
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 98/219 (44%), Gaps = 24/219 (10%)
Query: 508 EDFHIKYCIGTGGYGSVYRA-QLSSGKLVALKKLHR-------SETEEPAFLESFQTEAR 559
+++ + +G+G G V A + + K VA++ + + + +PA + +TE
Sbjct: 135 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPAL--NVETEIE 192
Query: 560 LLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSM 619
+L ++ H I+K+ F + +++ E ME G LF + + E T ++ + M
Sbjct: 193 ILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEA--TCKLYFYQ-M 248
Query: 620 AHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAF---VADFGLARLLHPDSSNRTLVVGT 676
A+ YLH + I+HRD E + DFG +++L S RTL GT
Sbjct: 249 LLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL-CGT 304
Query: 677 YGYIAPELAY---TMAVTEKCDVYSFGVVALEVLMGSHP 712
Y+APE+ T D +S GV+ L G P
Sbjct: 305 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 343
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 87/203 (42%), Gaps = 22/203 (10%)
Query: 516 IGTGGYGSV---YRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKL 572
IG+G G V Y A L VA+KKL R + +++ E L+ + H+NI+ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGL 88
Query: 573 YGFCLHNKCM------FLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYL 626
K + +++ E M+ +L V++ +ELD + ++ M + +L
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMD-ANLSQVIQ-----MELDHERMSYLLYQMLCGIKHL 142
Query: 627 HYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAY 686
H I+HRD + DFGLAR VV Y Y APE+
Sbjct: 143 H---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY-YRAPEVIL 198
Query: 687 TMAVTEKCDVYSFGVVALEVLMG 709
M E D++S G + E++ G
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 92/207 (44%), Gaps = 19/207 (9%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEP---AFLESFQTEARLLSQIRHRNIVK 571
+G+G + V + + S+G A K + + T+ E + E +L +I+H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 572 LYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMA---HALSYLHY 628
L+ + + LI E + G LF L E + T+ + + + H+L H+
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 629 DCKPS---IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELA 685
D KP ++ R+ + DFGLA + + + + GT ++APE+
Sbjct: 139 DLKPENIMLLDRNVPKPRIK--------IIDFGLAHKIDFGNEFKN-IFGTPEFVAPEIV 189
Query: 686 YTMAVTEKCDVYSFGVVALEVLMGSHP 712
+ + D++S GV+ +L G+ P
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 83/201 (41%), Gaps = 22/201 (10%)
Query: 516 IGTGGYGSV---YRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKL 572
IG+G G V Y A L VA+KKL R + +++ E L+ + H+NI+ L
Sbjct: 33 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISL 89
Query: 573 YGFCLHNKCM------FLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYL 626
K + +L+ E M+ C V +ELD + ++ M + +L
Sbjct: 90 LNVFTPQKTLEEFQDVYLVMELMDAN--LC----QVIQMELDHERMSYLLYQMLCGIKHL 143
Query: 627 HYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAY 686
H I+HRD + DFGLAR VV Y Y APE+
Sbjct: 144 H---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY-YRAPEVIL 199
Query: 687 TMAVTEKCDVYSFGVVALEVL 707
M E D++S G + E++
Sbjct: 200 GMGYKENVDIWSVGCIMGEMV 220
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 92/207 (44%), Gaps = 19/207 (9%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEP---AFLESFQTEARLLSQIRHRNIVK 571
+G+G + V + + S+G A K + + T+ E + E +L +I+H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 572 LYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKS---MAHALSYLHY 628
L+ + + LI E + G LF L E + T+ + + + H+L H+
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 629 DCKPS---IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELA 685
D KP ++ R+ + DFGLA + + + + GT ++APE+
Sbjct: 139 DLKPENIMLLDRNVPKPRIK--------IIDFGLAHKIDFGNEFKN-IFGTPEFVAPEIV 189
Query: 686 YTMAVTEKCDVYSFGVVALEVLMGSHP 712
+ + D++S GV+ +L G+ P
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 93/220 (42%), Gaps = 22/220 (10%)
Query: 505 EATEDFH-IKYCIGTGGYGSVYRAQLSSGKLVA----LKKLHRSETEEPAFLESFQTEAR 559
+ EDF+ I +G+G + V + + S L +KK + E + E
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 560 LLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSM 619
+L Q+ H N++ L+ + + LI E + G LF L E + T + +K +
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT---SFIKQI 124
Query: 620 AHALSYL------HYDCKPS-IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTL 672
++YL H+D KP I+ D + DFGLA + D
Sbjct: 125 LDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIK------LIDFGLAHEIE-DGVEFKN 177
Query: 673 VVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHP 712
+ GT ++APE+ + + D++S GV+ +L G+ P
Sbjct: 178 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 96/207 (46%), Gaps = 28/207 (13%)
Query: 516 IGTGGYGSVYRAQL-SSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
IG G +G VY+A+L SG+LVA+KK+ + + + E +++ ++ H NIV+L
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-------NRELQIMRKLDHCNIVRLRY 92
Query: 575 FCLHNK------CMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVK----SMAHALS 624
F + + L+ +Y+ +++ V R+ A + T V VK + +L+
Sbjct: 93 FFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQ---TLPVIYVKLYMYQLFRSLA 148
Query: 625 YLHYDCKPSIVHRDXXXXXXXXXXXXEAF-VADFGLARLLHPDSSNRTLVVGTYGYIAPE 683
Y+H I HRD + DFG A+ L N + + Y Y APE
Sbjct: 149 YIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPE 204
Query: 684 LAY-TMAVTEKCDVYSFGVVALEVLMG 709
L + T DV+S G V E+L+G
Sbjct: 205 LIFGATDYTSSIDVWSAGCVLAELLLG 231
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 96/205 (46%), Gaps = 22/205 (10%)
Query: 516 IGTGGYGSVYRAQL-SSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKL-Y 573
IG G +G VY+A+L SG+LVA+KK+ + + + E +++ ++ H NIV+L Y
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-------NRELQIMRKLDHCNIVRLRY 80
Query: 574 GFCLHNKCMFLIY-----EYMERGSLFCVLRNDVEAVELDWTKRVNI-VKSMAHALSYLH 627
F + ++Y +Y+ +++ V R+ A + V + + + +L+Y+H
Sbjct: 81 FFYSSGEKKDVVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 628 YDCKPSIVHRDXXXXXXXXXXXXEAF-VADFGLARLLHPDSSNRTLVVGTYGYIAPELAY 686
I HRD + DFG A+ L N + + Y Y APEL +
Sbjct: 140 ---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPELIF 195
Query: 687 -TMAVTEKCDVYSFGVVALEVLMGS 710
T DV+S G V E+L+G
Sbjct: 196 GATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 83/201 (41%), Gaps = 22/201 (10%)
Query: 516 IGTGGYGSV---YRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKL 572
IG+G G V Y A L VA+KKL R + +++ E L+ + H+NI+ L
Sbjct: 25 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISL 81
Query: 573 YGFCLHNKCM------FLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYL 626
K + +L+ E M+ C V +ELD + ++ M + +L
Sbjct: 82 LNVFTPQKTLEEFQDVYLVMELMDAN--LC----QVIQMELDHERMSYLLYQMLCGIKHL 135
Query: 627 HYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAY 686
H I+HRD + DFGLAR VV Y Y APE+
Sbjct: 136 H---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY-YRAPEVIL 191
Query: 687 TMAVTEKCDVYSFGVVALEVL 707
M E D++S G + E++
Sbjct: 192 GMGYKENVDIWSVGCIMGEMV 212
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 83/201 (41%), Gaps = 22/201 (10%)
Query: 516 IGTGGYGSV---YRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKL 572
IG+G G V Y A L VA+KKL R + +++ E L+ + H+NI+ L
Sbjct: 33 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISL 89
Query: 573 YGFCLHNKCM------FLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYL 626
K + +L+ E M+ C V +ELD + ++ M + +L
Sbjct: 90 LNVFTPQKTLEEFQDVYLVMELMDAN--LC----QVIQMELDHERMSYLLYQMLCGIKHL 143
Query: 627 HYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAY 686
H I+HRD + DFGLAR VV Y Y APE+
Sbjct: 144 H---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY-YRAPEVIL 199
Query: 687 TMAVTEKCDVYSFGVVALEVL 707
M E D++S G + E++
Sbjct: 200 GMGYKENVDIWSVGCIMGEMV 220
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 83/201 (41%), Gaps = 22/201 (10%)
Query: 516 IGTGGYGSV---YRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKL 572
IG+G G V Y A L VA+KKL R + +++ E L+ + H+NI+ L
Sbjct: 26 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISL 82
Query: 573 YGFCLHNKCM------FLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYL 626
K + +L+ E M+ C V +ELD + ++ M + +L
Sbjct: 83 LNVFTPQKTLEEFQDVYLVMELMDAN--LC----QVIQMELDHERMSYLLYQMLCGIKHL 136
Query: 627 HYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAY 686
H I+HRD + DFGLAR VV Y Y APE+
Sbjct: 137 H---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY-YRAPEVIL 192
Query: 687 TMAVTEKCDVYSFGVVALEVL 707
M E D++S G + E++
Sbjct: 193 GMGYKENVDIWSVGCIMGEMV 213
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 92/207 (44%), Gaps = 19/207 (9%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEP---AFLESFQTEARLLSQIRHRNIVK 571
+G+G + V + + S+G A K + + T+ E + E +L +I+H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 572 LYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKS---MAHALSYLHY 628
L+ + + LI E + G LF L E + T+ + + + H+L H+
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 629 DCKPS---IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELA 685
D KP ++ R+ + DFGLA + + + + GT ++APE+
Sbjct: 139 DLKPENIMLLDRNVPKPRIK--------IIDFGLAHKIDFGNEFKN-IFGTPEFVAPEIV 189
Query: 686 YTMAVTEKCDVYSFGVVALEVLMGSHP 712
+ + D++S GV+ +L G+ P
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 83/201 (41%), Gaps = 22/201 (10%)
Query: 516 IGTGGYGSV---YRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKL 572
IG+G G V Y A L VA+KKL R + +++ E L+ + H+NI+ L
Sbjct: 31 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISL 87
Query: 573 YGFCLHNKCM------FLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYL 626
K + +L+ E M+ C V +ELD + ++ M + +L
Sbjct: 88 LNVFTPQKTLEEFQDVYLVMELMDAN--LC----QVIQMELDHERMSYLLYQMLCGIKHL 141
Query: 627 HYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAY 686
H I+HRD + DFGLAR VV Y Y APE+
Sbjct: 142 H---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY-YRAPEVIL 197
Query: 687 TMAVTEKCDVYSFGVVALEVL 707
M E D++S G + E++
Sbjct: 198 GMGYKENVDIWSVGCIMGEMV 218
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 96/208 (46%), Gaps = 28/208 (13%)
Query: 516 IGTGGYGSVYRAQL-SSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
IG G +G VY+A+L SG+LVA+KK+ + + + E +++ ++ H NIV+L
Sbjct: 41 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-------NRELQIMRKLDHCNIVRLRY 93
Query: 575 FCLHNK------CMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVK----SMAHALS 624
F + + L+ +Y+ +++ V R+ A + T V VK + +L+
Sbjct: 94 FFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQ---TLPVIYVKLYMYQLFRSLA 149
Query: 625 YLHYDCKPSIVHRDXXXXXXXXXXXXEAF-VADFGLARLLHPDSSNRTLVVGTYGYIAPE 683
Y+H I HRD + DFG A+ L N + + Y Y APE
Sbjct: 150 YIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPE 205
Query: 684 LAY-TMAVTEKCDVYSFGVVALEVLMGS 710
L + T DV+S G V E+L+G
Sbjct: 206 LIFGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 95/205 (46%), Gaps = 22/205 (10%)
Query: 516 IGTGGYGSVYRAQL-SSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
IG G +G VY+A+L SG+LVA+KK+ + + + E +++ ++ H NIV+L
Sbjct: 29 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-------NRELQIMRKLDHCNIVRLRY 81
Query: 575 FCLHNK------CMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNI-VKSMAHALSYLH 627
F + + L+ +Y+ +++ V R+ A + V + + + +L+Y+H
Sbjct: 82 FFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 140
Query: 628 YDCKPSIVHRDXXXXXXXXXXXXEAF-VADFGLARLLHPDSSNRTLVVGTYGYIAPELAY 686
I HRD + DFG A+ L N + + Y Y APEL +
Sbjct: 141 ---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPELIF 196
Query: 687 -TMAVTEKCDVYSFGVVALEVLMGS 710
T DV+S G V E+L+G
Sbjct: 197 GATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 83/201 (41%), Gaps = 22/201 (10%)
Query: 516 IGTGGYGSV---YRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKL 572
IG+G G V Y A L VA+KKL R + +++ E L+ + H+NI+ L
Sbjct: 26 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISL 82
Query: 573 YGFCLHNKCM------FLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYL 626
K + +L+ E M+ C V +ELD + ++ M + +L
Sbjct: 83 LNVFTPQKTLEEFQDVYLVMELMDAN--LC----QVIQMELDHERMSYLLYQMLCGIKHL 136
Query: 627 HYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAY 686
H I+HRD + DFGLAR VV Y Y APE+
Sbjct: 137 H---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY-YRAPEVIL 192
Query: 687 TMAVTEKCDVYSFGVVALEVL 707
M E D++S G + E++
Sbjct: 193 GMGYKENVDIWSVGCIMGEMV 213
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 83/201 (41%), Gaps = 22/201 (10%)
Query: 516 IGTGGYGSV---YRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKL 572
IG+G G V Y A L VA+KKL R + +++ E L+ + H+NI+ L
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISL 88
Query: 573 YGFCLHNKCM------FLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYL 626
K + +L+ E M+ C V +ELD + ++ M + +L
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELMDAN--LC----QVIQMELDHERMSYLLYQMLCGIKHL 142
Query: 627 HYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAY 686
H I+HRD + DFGLAR VV Y Y APE+
Sbjct: 143 H---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY-YRAPEVIL 198
Query: 687 TMAVTEKCDVYSFGVVALEVL 707
M E D++S G + E++
Sbjct: 199 GMGYKENVDIWSVGCIMGEMV 219
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 95/205 (46%), Gaps = 22/205 (10%)
Query: 516 IGTGGYGSVYRAQL-SSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
IG G +G VY+A+L SG+LVA+KK+ + + + E +++ ++ H NIV+L
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-------NRELQIMRKLDHCNIVRLRY 80
Query: 575 FCLHNK------CMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNI-VKSMAHALSYLH 627
F + + L+ +Y+ +++ V R+ A + V + + + +L+Y+H
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 628 YDCKPSIVHRDXXXXXXXXXXXXEAF-VADFGLARLLHPDSSNRTLVVGTYGYIAPELAY 686
I HRD + DFG A+ L N + + Y Y APEL +
Sbjct: 140 ---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPELIF 195
Query: 687 -TMAVTEKCDVYSFGVVALEVLMGS 710
T DV+S G V E+L+G
Sbjct: 196 GATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 95/205 (46%), Gaps = 22/205 (10%)
Query: 516 IGTGGYGSVYRAQL-SSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
IG G +G VY+A+L SG+LVA+KK+ + + + E +++ ++ H NIV+L
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-------NRELQIMRKLDHCNIVRLRY 80
Query: 575 FCLHNK------CMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNI-VKSMAHALSYLH 627
F + + L+ +Y+ +++ V R+ A + V + + + +L+Y+H
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 628 YDCKPSIVHRDXXXXXXXXXXXXEAF-VADFGLARLLHPDSSNRTLVVGTYGYIAPELAY 686
I HRD + DFG A+ L N + + Y Y APEL +
Sbjct: 140 ---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPELIF 195
Query: 687 -TMAVTEKCDVYSFGVVALEVLMGS 710
T DV+S G V E+L+G
Sbjct: 196 GATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 92/207 (44%), Gaps = 19/207 (9%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEP---AFLESFQTEARLLSQIRHRNIVK 571
+G+G + V + + S+G A K + + T+ E + E +L +I+H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 572 LYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKS---MAHALSYLHY 628
L+ + + LI E + G LF L E + T+ + + + H+L H+
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 629 DCKPS---IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELA 685
D KP ++ R+ + DFGLA + + + + GT ++APE+
Sbjct: 139 DLKPENIMLLDRNVPKPRIK--------IIDFGLAHKIDFGNEFKN-IFGTPEFVAPEIV 189
Query: 686 YTMAVTEKCDVYSFGVVALEVLMGSHP 712
+ + D++S GV+ +L G+ P
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 91/219 (41%), Gaps = 20/219 (9%)
Query: 505 EATEDFH-IKYCIGTGGYGSVYRAQLSSGKLVA----LKKLHRSETEEPAFLESFQTEAR 559
+ EDF+ I +G+G + V + + S L +KK + E + E
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 560 LLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSM 619
+L Q+ H N++ L+ + + LI E + G LF L E + T + +K +
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT---SFIKQI 124
Query: 620 AHALSYL------HYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLV 673
++YL H+D KP + + DFGLA + D +
Sbjct: 125 LDGVNYLHTKKIAHFDLKP-----ENIMLLDKNIPIPHIKLIDFGLAHEIE-DGVEFKNI 178
Query: 674 VGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHP 712
GT ++APE+ + + D++S GV+ +L G+ P
Sbjct: 179 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 83/201 (41%), Gaps = 22/201 (10%)
Query: 516 IGTGGYGSV---YRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKL 572
IG+G G V Y A L VA+KKL R + +++ E L+ + H+NI+ L
Sbjct: 70 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISL 126
Query: 573 YGFCLHNKCM------FLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYL 626
K + +L+ E M+ C V +ELD + ++ M + +L
Sbjct: 127 LNVFTPQKTLEEFQDVYLVMELMDAN--LC----QVIQMELDHERMSYLLYQMLCGIKHL 180
Query: 627 HYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAY 686
H I+HRD + DFGLAR VV Y Y APE+
Sbjct: 181 H---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY-YRAPEVIL 236
Query: 687 TMAVTEKCDVYSFGVVALEVL 707
M E D++S G + E++
Sbjct: 237 GMGYKENVDIWSVGCIMGEMV 257
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 96/207 (46%), Gaps = 28/207 (13%)
Query: 516 IGTGGYGSVYRAQL-SSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
IG G +G VY+A+L SG+LVA+KK+ + + + E +++ ++ H NIV+L
Sbjct: 33 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-------NRELQIMRKLDHCNIVRLRY 85
Query: 575 FCLHNK------CMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVK----SMAHALS 624
F + + L+ +Y+ +++ V R+ A + T V VK + +L+
Sbjct: 86 FFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQ---TLPVIYVKLYMYQLFRSLA 141
Query: 625 YLHYDCKPSIVHRDXXXXXXXXXXXXEAF-VADFGLARLLHPDSSNRTLVVGTYGYIAPE 683
Y+H I HRD + DFG A+ L N + + Y Y APE
Sbjct: 142 YIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPE 197
Query: 684 LAY-TMAVTEKCDVYSFGVVALEVLMG 709
L + T DV+S G V E+L+G
Sbjct: 198 LIFGATDYTSSIDVWSAGCVLAELLLG 224
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 91/219 (41%), Gaps = 20/219 (9%)
Query: 505 EATEDFH-IKYCIGTGGYGSVYRAQLSSGKLVA----LKKLHRSETEEPAFLESFQTEAR 559
+ EDF+ I +G+G + V + + S L +KK + E + E
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 560 LLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSM 619
+L Q+ H N++ L+ + + LI E + G LF L E + T + +K +
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT---SFIKQI 124
Query: 620 AHALSYL------HYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLV 673
++YL H+D KP + + DFGLA + D +
Sbjct: 125 LDGVNYLHTKKIAHFDLKP-----ENIMLLDKNIPIPHIKLIDFGLAHEIE-DGVEFKNI 178
Query: 674 VGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHP 712
GT ++APE+ + + D++S GV+ +L G+ P
Sbjct: 179 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 83/201 (41%), Gaps = 22/201 (10%)
Query: 516 IGTGGYGSV---YRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKL 572
IG+G G V Y A L VA+KKL R + +++ E L+ + H+NI+ L
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISL 88
Query: 573 YGFCLHNKCM------FLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYL 626
K + +L+ E M+ C V +ELD + ++ M + +L
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELMDAN--LC----QVIQMELDHERMSYLLYQMLCGIKHL 142
Query: 627 HYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAY 686
H I+HRD + DFGLAR VV Y Y APE+
Sbjct: 143 H---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY-YRAPEVIL 198
Query: 687 TMAVTEKCDVYSFGVVALEVL 707
M E D++S G + E++
Sbjct: 199 GMGYKENVDIWSVGCIMGEMV 219
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 96/208 (46%), Gaps = 28/208 (13%)
Query: 516 IGTGGYGSVYRAQL-SSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
IG G +G VY+A+L SG+LVA+KK+ + + + E +++ ++ H NIV+L
Sbjct: 36 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-------NRELQIMRKLDHCNIVRLRY 88
Query: 575 FCLHNK------CMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVK----SMAHALS 624
F + + L+ +Y+ +++ V R+ A + T V VK + +L+
Sbjct: 89 FFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQ---TLPVIYVKLYMYQLFRSLA 144
Query: 625 YLHYDCKPSIVHRDXXXXXXXXXXXXEAF-VADFGLARLLHPDSSNRTLVVGTYGYIAPE 683
Y+H I HRD + DFG A+ L N + + Y Y APE
Sbjct: 145 YIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPE 200
Query: 684 LAY-TMAVTEKCDVYSFGVVALEVLMGS 710
L + T DV+S G V E+L+G
Sbjct: 201 LIFGATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 95/205 (46%), Gaps = 22/205 (10%)
Query: 516 IGTGGYGSVYRAQL-SSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
IG G +G VY+A+L SG+LVA+KK+ + + + E +++ ++ H NIV+L
Sbjct: 47 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-------NRELQIMRKLDHCNIVRLRY 99
Query: 575 FCLHNK------CMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNI-VKSMAHALSYLH 627
F + + L+ +Y+ +++ V R+ A + V + + + +L+Y+H
Sbjct: 100 FFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 158
Query: 628 YDCKPSIVHRDXXXXXXXXXXXXEAF-VADFGLARLLHPDSSNRTLVVGTYGYIAPELAY 686
I HRD + DFG A+ L N + + Y Y APEL +
Sbjct: 159 ---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPELIF 214
Query: 687 -TMAVTEKCDVYSFGVVALEVLMGS 710
T DV+S G V E+L+G
Sbjct: 215 GATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 96/207 (46%), Gaps = 28/207 (13%)
Query: 516 IGTGGYGSVYRAQL-SSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
IG G +G VY+A+L SG+LVA+KK+ + + + E +++ ++ H NIV+L
Sbjct: 66 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-------NRELQIMRKLDHCNIVRLRY 118
Query: 575 FCLHNK------CMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVK----SMAHALS 624
F + + L+ +Y+ +++ V R+ A + T V VK + +L+
Sbjct: 119 FFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQ---TLPVIYVKLYMYQLFRSLA 174
Query: 625 YLHYDCKPSIVHRDXXXXXXXXXXXXEAF-VADFGLARLLHPDSSNRTLVVGTYGYIAPE 683
Y+H I HRD + DFG A+ L N + + Y Y APE
Sbjct: 175 YIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPE 230
Query: 684 LAY-TMAVTEKCDVYSFGVVALEVLMG 709
L + T DV+S G V E+L+G
Sbjct: 231 LIFGATDYTSSIDVWSAGCVLAELLLG 257
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 90/219 (41%), Gaps = 20/219 (9%)
Query: 500 FEEMIEATEDFHIKYCIGTGGYGSVYRAQLSSGKL-VALKKLHRSETEEPAFLESFQTEA 558
F+ M+ ++ + +K IG G Y R + + A+K + +S+ + +E
Sbjct: 20 FQSMV-FSDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEI----- 73
Query: 559 RLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLF-CVLRNDVEAVELDWTKRVNIVK 617
LL +H NI+ L K ++L+ E M G L +LR + ++
Sbjct: 74 -LLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKF----FSEREASFVLH 128
Query: 618 SMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXX---EAF-VADFGLARLLHPDSSNRTLV 673
++ + YLH +VHRD E + DFG A+ L ++
Sbjct: 129 TIGKTVEYLH---SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTP 185
Query: 674 VGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHP 712
T ++APE+ E CD++S G++ +L G P
Sbjct: 186 CYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 95/205 (46%), Gaps = 22/205 (10%)
Query: 516 IGTGGYGSVYRAQL-SSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
IG G +G VY+A+L SG+LVA+KK+ + + + E +++ ++ H NIV+L
Sbjct: 32 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-------NRELQIMRKLDHCNIVRLRY 84
Query: 575 FCLHNK------CMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNI-VKSMAHALSYLH 627
F + + L+ +Y+ +++ V R+ A + V + + + +L+Y+H
Sbjct: 85 FFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 143
Query: 628 YDCKPSIVHRDXXXXXXXXXXXXEAF-VADFGLARLLHPDSSNRTLVVGTYGYIAPELAY 686
I HRD + DFG A+ L N + + Y Y APEL +
Sbjct: 144 ---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPELIF 199
Query: 687 -TMAVTEKCDVYSFGVVALEVLMGS 710
T DV+S G V E+L+G
Sbjct: 200 GATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 95/204 (46%), Gaps = 22/204 (10%)
Query: 516 IGTGGYGSVYRAQL-SSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
IG G +G VY+A+L SG+LVA+KK+ + + + E +++ ++ H NIV+L
Sbjct: 107 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-------NRELQIMRKLDHCNIVRLRY 159
Query: 575 FCLHNK------CMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNI-VKSMAHALSYLH 627
F + + L+ +Y+ +++ V R+ A + V + + + +L+Y+H
Sbjct: 160 FFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 218
Query: 628 YDCKPSIVHRDXXXXXXXXXXXXEAF-VADFGLARLLHPDSSNRTLVVGTYGYIAPELAY 686
I HRD + DFG A+ L N + + Y Y APEL +
Sbjct: 219 ---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPELIF 274
Query: 687 -TMAVTEKCDVYSFGVVALEVLMG 709
T DV+S G V E+L+G
Sbjct: 275 GATDYTSSIDVWSAGCVLAELLLG 298
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 85/203 (41%), Gaps = 18/203 (8%)
Query: 515 CIGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLY 573
+GTG +G V + SG A+K L + + + +E E R+L + +VKL
Sbjct: 48 TLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 574 GFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELD---WTKRVNIVKSMAHALSYLHYDC 630
N ++++ EY+ G +F LR E + ++ + H+L ++ D
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 631 KPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTL-VVGTYGYIAPELAYTMA 689
KP + D V DFG A+ + RT + GT Y+AP + +
Sbjct: 168 KPENLLIDQQGYIQ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPAIILSKG 214
Query: 690 VTEKCDVYSFGVVALEVLMGSHP 712
+ D ++ GV+ E+ G P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 92/207 (44%), Gaps = 19/207 (9%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEP---AFLESFQTEARLLSQIRHRNIVK 571
+G+G + V + + S+G A K + + T+ E + E +L +I+H N++
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 572 LYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKS---MAHALSYLHY 628
L+ + + LI E + G LF L E + T+ + + + H+L H+
Sbjct: 78 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 137
Query: 629 DCKPS---IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELA 685
D KP ++ R+ + DFGLA + + + + GT ++APE+
Sbjct: 138 DLKPENIMLLDRNVPKPRIK--------IIDFGLAHKIDFGNEFKN-IFGTPEFVAPEIV 188
Query: 686 YTMAVTEKCDVYSFGVVALEVLMGSHP 712
+ + D++S GV+ +L G+ P
Sbjct: 189 NYEPLGLEADMWSIGVITYILLSGASP 215
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 91/219 (41%), Gaps = 20/219 (9%)
Query: 505 EATEDFH-IKYCIGTGGYGSVYRAQLSSGKLVA----LKKLHRSETEEPAFLESFQTEAR 559
+ EDF+ I +G+G + V + + S L +KK + E + E
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 560 LLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSM 619
+L Q+ H N++ L+ + + LI E + G LF L E + T + +K +
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT---SFIKQI 124
Query: 620 AHALSYL------HYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLV 673
++YL H+D KP + + DFGLA + D +
Sbjct: 125 LDGVNYLHTKKIAHFDLKP-----ENIMLLDKNIPIPHIKLIDFGLAHEIE-DGVEFKNI 178
Query: 674 VGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHP 712
GT ++APE+ + + D++S GV+ +L G+ P
Sbjct: 179 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 95/205 (46%), Gaps = 22/205 (10%)
Query: 516 IGTGGYGSVYRAQL-SSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
IG G +G VY+A+L SG+LVA+KK+ + + + E +++ ++ H NIV+L
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-------NRELQIMRKLDHCNIVRLRY 80
Query: 575 FCLHNK------CMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNI-VKSMAHALSYLH 627
F + + L+ +Y+ +++ V R+ A + V + + + +L+Y+H
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 628 YDCKPSIVHRDXXXXXXXXXXXXEAF-VADFGLARLLHPDSSNRTLVVGTYGYIAPELAY 686
I HRD + DFG A+ L N + + Y Y APEL +
Sbjct: 140 ---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPELIF 195
Query: 687 -TMAVTEKCDVYSFGVVALEVLMGS 710
T DV+S G V E+L+G
Sbjct: 196 GATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 83/201 (41%), Gaps = 22/201 (10%)
Query: 516 IGTGGYGSV---YRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKL 572
IG+G G V Y A L VA+KKL R + +++ E L+ + H+NI+ L
Sbjct: 70 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISL 126
Query: 573 YGFCLHNKCM------FLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYL 626
K + +L+ E M+ C V +ELD + ++ M + +L
Sbjct: 127 LNVFTPQKTLEEFQDVYLVMELMDAN--LC----QVIQMELDHERMSYLLYQMLCGIKHL 180
Query: 627 HYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAY 686
H I+HRD + DFGLAR VV Y Y APE+
Sbjct: 181 H---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY-YRAPEVIL 236
Query: 687 TMAVTEKCDVYSFGVVALEVL 707
M E D++S G + E++
Sbjct: 237 GMGYKENVDIWSVGCIMGEMV 257
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 96/207 (46%), Gaps = 28/207 (13%)
Query: 516 IGTGGYGSVYRAQL-SSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
IG G +G VY+A+L SG+LVA+KK+ + + + E +++ ++ H NIV+L
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-------NRELQIMRKLDHCNIVRLRY 92
Query: 575 FCLHNK------CMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVK----SMAHALS 624
F + + L+ +Y+ +++ V R+ A + T V VK + +L+
Sbjct: 93 FFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQ---TLPVIYVKLYMYQLFRSLA 148
Query: 625 YLHYDCKPSIVHRDXXXXXXXXXXXXEAF-VADFGLARLLHPDSSNRTLVVGTYGYIAPE 683
Y+H I HRD + DFG A+ L N + + Y Y APE
Sbjct: 149 YIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPE 204
Query: 684 LAY-TMAVTEKCDVYSFGVVALEVLMG 709
L + T DV+S G V E+L+G
Sbjct: 205 LIFGATDYTSSIDVWSAGCVLAELLLG 231
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 96/207 (46%), Gaps = 28/207 (13%)
Query: 516 IGTGGYGSVYRAQL-SSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
IG G +G VY+A+L SG+LVA+KK+ + + + E +++ ++ H NIV+L
Sbjct: 64 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-------NRELQIMRKLDHCNIVRLRY 116
Query: 575 FCLHNK------CMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVK----SMAHALS 624
F + + L+ +Y+ +++ V R+ A + T V VK + +L+
Sbjct: 117 FFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQ---TLPVIYVKLYMYQLFRSLA 172
Query: 625 YLHYDCKPSIVHRDXXXXXXXXXXXXEAF-VADFGLARLLHPDSSNRTLVVGTYGYIAPE 683
Y+H I HRD + DFG A+ L N + + Y Y APE
Sbjct: 173 YIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPE 228
Query: 684 LAY-TMAVTEKCDVYSFGVVALEVLMG 709
L + T DV+S G V E+L+G
Sbjct: 229 LIFGATDYTSSIDVWSAGCVLAELLLG 255
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 91/219 (41%), Gaps = 20/219 (9%)
Query: 505 EATEDFH-IKYCIGTGGYGSVYRAQLSSGKLVA----LKKLHRSETEEPAFLESFQTEAR 559
+ EDF+ I +G+G + V + + S L +KK + E + E
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 560 LLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSM 619
+L Q+ H N++ L+ + + LI E + G LF L E + T + +K +
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT---SFIKQI 124
Query: 620 AHALSYL------HYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLV 673
++YL H+D KP + + DFGLA + D +
Sbjct: 125 LDGVNYLHTKKIAHFDLKP-----ENIMLLDKNIPIPHIKLIDFGLAHEIE-DGVEFKNI 178
Query: 674 VGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHP 712
GT ++APE+ + + D++S GV+ +L G+ P
Sbjct: 179 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 92/207 (44%), Gaps = 19/207 (9%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEP---AFLESFQTEARLLSQIRHRNIVK 571
+G+G + V + + S+G A K + + T+ E + E +L +I+H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 572 LYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKS---MAHALSYLHY 628
L+ + + LI E + G LF L E + T+ + + + H+L H+
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 629 DCKPS---IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELA 685
D KP ++ R+ + DFGLA + + + + GT ++APE+
Sbjct: 139 DLKPENIMLLDRNVPKPRIK--------IIDFGLAHKIDFGNEFKN-IFGTPEFVAPEIV 189
Query: 686 YTMAVTEKCDVYSFGVVALEVLMGSHP 712
+ + D++S GV+ +L G+ P
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 91/218 (41%), Gaps = 23/218 (10%)
Query: 516 IGTGGYGSVYRA------QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHR-N 568
+G G +G V A + ++ + VA+K L T + +E ++L I H N
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH--RALMSELKILIHIGHHLN 92
Query: 569 IVKLYGFCLH-NKCMFLIYEYMERGSLFCVLR---NDVEAVELDWTKRVNIVKSMAHALS 624
+V L G C + +I E+ + G+L LR N+ ++ ++ H +
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 152
Query: 625 Y-------LHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLH--PDSSNRTLVVG 675
Y + + +HRD + DFGLAR ++ PD +
Sbjct: 153 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 212
Query: 676 TYGYIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHP 712
++APE + T + DV+SFGV+ E+ +G+ P
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 250
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 92/207 (44%), Gaps = 19/207 (9%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEP---AFLESFQTEARLLSQIRHRNIVK 571
+G+G + V + + S+G A K + + T+ E + E +L +I+H N++
Sbjct: 19 LGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 572 LYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKS---MAHALSYLHY 628
L+ + + LI E + G LF L E + T+ + + + H+L H+
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 629 DCKPS---IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELA 685
D KP ++ R+ + DFGLA + + + + GT ++APE+
Sbjct: 139 DLKPENIMLLDRNVPKPRIK--------IIDFGLAHKIDFGNEFKN-IFGTPEFVAPEIV 189
Query: 686 YTMAVTEKCDVYSFGVVALEVLMGSHP 712
+ + D++S GV+ +L G+ P
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 93/213 (43%), Gaps = 27/213 (12%)
Query: 516 IGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQ--IRHRNI--- 569
+G G YG V + + + SG+++A+K++ + Q + RLL I R +
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNS--------QEQKRLLMDLDISMRTVDCP 110
Query: 570 --VKLYGFCLHNKCMFLIYEYMERG--SLFCVLRNDVEAVELDWTKRVNIVKSMAHALSY 625
V YG +++ E M+ + + + + + D ++ + S+ AL +
Sbjct: 111 FTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAV--SIVKALEH 168
Query: 626 LHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELA 685
LH K S++HRD + + DFG++ L DS +T+ G Y+APE
Sbjct: 169 LH--SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLV-DSVAKTIDAGCKPYMAPERI 225
Query: 686 ----YTMAVTEKCDVYSFGVVALEVLMGSHPTD 714
+ K D++S G+ +E+ + P D
Sbjct: 226 NPELNQKGYSVKSDIWSLGITMIELAILRFPYD 258
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 92/207 (44%), Gaps = 19/207 (9%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEP---AFLESFQTEARLLSQIRHRNIVK 571
+G+G + V + + S+G A K + + T+ E + E +L +I+H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 572 LYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKS---MAHALSYLHY 628
L+ + + LI E + G LF L E + T+ + + + H+L H+
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 629 DCKPS---IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELA 685
D KP ++ R+ + DFGLA + + + + GT ++APE+
Sbjct: 139 DLKPENIMLLDRNVPKPRIK--------IIDFGLAHKIDFGNEFKN-IFGTPEFVAPEIV 189
Query: 686 YTMAVTEKCDVYSFGVVALEVLMGSHP 712
+ + D++S GV+ +L G+ P
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 96/207 (46%), Gaps = 28/207 (13%)
Query: 516 IGTGGYGSVYRAQL-SSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
IG G +G VY+A+L SG+LVA+KK+ + + + E +++ ++ H NIV+L
Sbjct: 56 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-------NRELQIMRKLDHCNIVRLRY 108
Query: 575 FCLHNK------CMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVK----SMAHALS 624
F + + L+ +Y+ +++ V R+ A + T V VK + +L+
Sbjct: 109 FFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQ---TLPVIYVKLYMYQLFRSLA 164
Query: 625 YLHYDCKPSIVHRDXXXXXXXXXXXXEAF-VADFGLARLLHPDSSNRTLVVGTYGYIAPE 683
Y+H I HRD + DFG A+ L N + + Y Y APE
Sbjct: 165 YIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPE 220
Query: 684 LAY-TMAVTEKCDVYSFGVVALEVLMG 709
L + T DV+S G V E+L+G
Sbjct: 221 LIFGATDYTSSIDVWSAGCVLAELLLG 247
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 96/207 (46%), Gaps = 28/207 (13%)
Query: 516 IGTGGYGSVYRAQL-SSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
IG G +G VY+A+L SG+LVA+KK+ + + + E +++ ++ H NIV+L
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-------NRELQIMRKLDHCNIVRLRY 114
Query: 575 FCLHNK------CMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVK----SMAHALS 624
F + + L+ +Y+ +++ V R+ A + T V VK + +L+
Sbjct: 115 FFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQ---TLPVIYVKLYMYQLFRSLA 170
Query: 625 YLHYDCKPSIVHRDXXXXXXXXXXXXEAF-VADFGLARLLHPDSSNRTLVVGTYGYIAPE 683
Y+H I HRD + DFG A+ L N + + Y Y APE
Sbjct: 171 YIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPE 226
Query: 684 LAY-TMAVTEKCDVYSFGVVALEVLMG 709
L + T DV+S G V E+L+G
Sbjct: 227 LIFGATDYTSSIDVWSAGCVLAELLLG 253
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 92/207 (44%), Gaps = 19/207 (9%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEP---AFLESFQTEARLLSQIRHRNIVK 571
+G+G + V + + S+G A K + + T+ E + E +L +I+H N++
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 572 LYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKS---MAHALSYLHY 628
L+ + + LI E + G LF L E + T+ + + + H+L H+
Sbjct: 78 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 137
Query: 629 DCKPS---IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELA 685
D KP ++ R+ + DFGLA + + + + GT ++APE+
Sbjct: 138 DLKPENIMLLDRNVPKPRIK--------IIDFGLAHKIDFGNEFKN-IFGTPEFVAPEIV 188
Query: 686 YTMAVTEKCDVYSFGVVALEVLMGSHP 712
+ + D++S GV+ +L G+ P
Sbjct: 189 NYEPLGLEADMWSIGVITYILLSGASP 215
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 96/207 (46%), Gaps = 28/207 (13%)
Query: 516 IGTGGYGSVYRAQL-SSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
IG G +G VY+A+L SG+LVA+KK+ + + + E +++ ++ H NIV+L
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-------NRELQIMRKLDHCNIVRLRY 114
Query: 575 FCLHNK------CMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVK----SMAHALS 624
F + + L+ +Y+ +++ V R+ A + T V VK + +L+
Sbjct: 115 FFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQ---TLPVIYVKLYMYQLFRSLA 170
Query: 625 YLHYDCKPSIVHRDXXXXXXXXXXXXEAF-VADFGLARLLHPDSSNRTLVVGTYGYIAPE 683
Y+H I HRD + DFG A+ L N + + Y Y APE
Sbjct: 171 YIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPE 226
Query: 684 LAY-TMAVTEKCDVYSFGVVALEVLMG 709
L + T DV+S G V E+L+G
Sbjct: 227 LIFGATDYTSSIDVWSAGCVLAELLLG 253
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 85/203 (41%), Gaps = 18/203 (8%)
Query: 515 CIGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLY 573
+GTG +G V + +G A+K L + + + +E E R+ + +VKL
Sbjct: 49 TLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNFPFLVKLE 108
Query: 574 GFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELD---WTKRVNIVKSMAHALSYLHYDC 630
N ++++ EY G +F LR E + ++ + H+L ++ D
Sbjct: 109 FSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 168
Query: 631 KPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTL-VVGTYGYIAPELAYTMA 689
KP + D VADFG A+ + RT + GT Y+APE+ +
Sbjct: 169 KPENLLIDQQGYIK---------VADFGFAKRV----KGRTWXLCGTPEYLAPEIILSKG 215
Query: 690 VTEKCDVYSFGVVALEVLMGSHP 712
+ D ++ GV+ E+ G P
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPP 238
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 88/215 (40%), Gaps = 18/215 (8%)
Query: 506 ATEDFHIKYCIGTGGYGSVYRAQLSSGKL----VALKKLHRSETEEPAFLESFQTEARLL 561
A ED + +G G +G VY ++ K VA+K + T + E F +EA ++
Sbjct: 22 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNK--EKFMSEAVIM 79
Query: 562 SQIRHRNIVKLYGFCLHNKCMFL--IYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSM 619
+ H +IVKL G + +Y Y E G +N ++ + L + I K+M
Sbjct: 80 KNLDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLV-LYSLQICKAM 138
Query: 620 AHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVG-TYG 678
A+ S + VHRD + DFGL+R + + + V
Sbjct: 139 AYLESI-------NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIK 191
Query: 679 YIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHP 712
+++PE T DV+ F V E+L G P
Sbjct: 192 WMSPESINFRRFTTASDVWMFAVCMWEILSFGKQP 226
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 87/204 (42%), Gaps = 21/204 (10%)
Query: 516 IGTGGYG--SVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLY 573
IG+G +G + R +L+ +LVA+K + R A E+ Q E +RH NIV+
Sbjct: 28 IGSGNFGVARLMRDKLTK-ELVAVKYIERGA----AIDENVQREIINHRSLRHPNIVRFK 82
Query: 574 GFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPS 633
L + +I EY G L+ + N A + + + +SY H
Sbjct: 83 EVILTPTHLAIIMEYASGGELYERICN---AGRFSEDEARFFFQQLLSGVSYCH---SMQ 136
Query: 634 IVHRDXXXXXX--XXXXXXEAFVADFGLAR--LLHPDSSNRTLVVGTYGYIAPELAYTMA 689
I HRD + DFG ++ +LH S VGT YIAPE+
Sbjct: 137 ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH---SQPKSTVGTPAYIAPEVLLRQE 193
Query: 690 VTEK-CDVYSFGVVALEVLMGSHP 712
K DV+S GV +L+G++P
Sbjct: 194 YDGKIADVWSCGVTLYVMLVGAYP 217
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 92/207 (44%), Gaps = 19/207 (9%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEP---AFLESFQTEARLLSQIRHRNIVK 571
+G+G + V + + S+G A K + + T+ E + E +L +I+H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 572 LYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKS---MAHALSYLHY 628
L+ + + LI E + G LF L E + T+ + + + H+L H+
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 629 DCKPS---IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELA 685
D KP ++ R+ + DFGLA + + + + GT ++APE+
Sbjct: 139 DLKPENIMLLDRNVPKPRIK--------IIDFGLAHKIDFGNEFKN-IFGTPEFVAPEIV 189
Query: 686 YTMAVTEKCDVYSFGVVALEVLMGSHP 712
+ + D++S GV+ +L G+ P
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 96/228 (42%), Gaps = 22/228 (9%)
Query: 496 GRITFEEMIEATEDFH-IKYCIGTGGYGSVYRAQLSSGKLVA----LKKLHRSETEEPAF 550
G TF++ + EDF+ I +G+G + V + + S L +KK +
Sbjct: 1 GMETFKQ--QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVC 58
Query: 551 LESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWT 610
E + E +L Q+ H NI+ L+ + + LI E + G LF L E + T
Sbjct: 59 REEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT 118
Query: 611 KRVNIVKSMAHALSYL------HYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLH 664
+ +K + ++YL H+D KP + + DFGLA +
Sbjct: 119 ---SFIKQILDGVNYLHTKKIAHFDLKP-----ENIMLLDKNIPIPHIKLIDFGLAHEIE 170
Query: 665 PDSSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHP 712
D + GT ++APE+ + + D++S GV+ +L G+ P
Sbjct: 171 -DGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 88/215 (40%), Gaps = 18/215 (8%)
Query: 506 ATEDFHIKYCIGTGGYGSVYRAQLSSGKL----VALKKLHRSETEEPAFLESFQTEARLL 561
A ED + +G G +G VY ++ K VA+K + T + E F +EA ++
Sbjct: 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNK--EKFMSEAVIM 67
Query: 562 SQIRHRNIVKLYGFCLHNKCMFL--IYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSM 619
+ H +IVKL G + +Y Y E G +N ++ + L + I K+M
Sbjct: 68 KNLDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLV-LYSLQICKAM 126
Query: 620 AHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVG-TYG 678
A+ S + VHRD + DFGL+R + + + V
Sbjct: 127 AYLESI-------NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIK 179
Query: 679 YIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHP 712
+++PE T DV+ F V E+L G P
Sbjct: 180 WMSPESINFRRFTTASDVWMFAVCMWEILSFGKQP 214
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 91/213 (42%), Gaps = 23/213 (10%)
Query: 516 IGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
+G G +V+R + +G L A+K + P ++ E +L ++ H+NIVKL+
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQ--MREFEVLKKLNHKNIVKLFA 74
Query: 575 FCLH--NKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKP 632
+ LI E+ GSL+ VL A L ++ + +++ + +++L +
Sbjct: 75 IEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN--- 131
Query: 633 SIVHRDXXXXXXXXXXXXEA----FVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYTM 688
IVHR+ + + DFG AR L D + GT Y+ P++ Y
Sbjct: 132 GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE-DDEQFVXLYGTEEYLHPDM-YER 189
Query: 689 AVTEK---------CDVYSFGVVALEVLMGSHP 712
AV K D++S GV GS P
Sbjct: 190 AVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 92/207 (44%), Gaps = 19/207 (9%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEP---AFLESFQTEARLLSQIRHRNIVK 571
+G+G + V + + S+G A K + + T+ E + E +L +I+H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 572 LYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKS---MAHALSYLHY 628
L+ + + LI E + G LF L E + T+ + + + H+L H+
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 629 DCKPS---IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELA 685
D KP ++ R+ + DFGLA + + + + GT ++APE+
Sbjct: 139 DLKPENIMLLDRNVPKPRIK--------IIDFGLAHKIDFGNEFKN-IFGTPEFVAPEIV 189
Query: 686 YTMAVTEKCDVYSFGVVALEVLMGSHP 712
+ + D++S GV+ +L G+ P
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 88/215 (40%), Gaps = 18/215 (8%)
Query: 506 ATEDFHIKYCIGTGGYGSVYRAQLSSGKL----VALKKLHRSETEEPAFLESFQTEARLL 561
A ED + +G G +G VY ++ K VA+K + T + E F +EA ++
Sbjct: 6 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNK--EKFMSEAVIM 63
Query: 562 SQIRHRNIVKLYGFCLHNKCMFL--IYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSM 619
+ H +IVKL G + +Y Y E G +N ++ + L + I K+M
Sbjct: 64 KNLDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLV-LYSLQICKAM 122
Query: 620 AHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVG-TYG 678
A+ S + VHRD + DFGL+R + + + V
Sbjct: 123 AYLESI-------NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIK 175
Query: 679 YIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHP 712
+++PE T DV+ F V E+L G P
Sbjct: 176 WMSPESINFRRFTTASDVWMFAVCMWEILSFGKQP 210
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 90/218 (41%), Gaps = 23/218 (10%)
Query: 516 IGTGGYGSVYRA------QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHR-N 568
+G G +G V A + ++ + VA+K L T + +E ++L I H N
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH--RALMSELKILIHIGHHLN 92
Query: 569 IVKLYGFCLH-NKCMFLIYEYMERGSLFCVLR---NDVEAVELDWTKRVNIVKSMAHALS 624
+V L G C + +I E+ + G+L LR N+ ++ ++ H +
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 152
Query: 625 Y-------LHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLL--HPDSSNRTLVVG 675
Y + + +HRD + DFGLAR + PD +
Sbjct: 153 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 676 TYGYIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHP 712
++APE + T + DV+SFGV+ E+ +G+ P
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 250
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 92/214 (42%), Gaps = 25/214 (11%)
Query: 510 FHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETE-------EPAFL-ESFQTEARLL 561
+ ++ I +G YG+V S G VA+K++ + ++ +FL + E RLL
Sbjct: 24 YTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLL 83
Query: 562 SQIRHRNIVKLYGFCLH--NKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRV-----N 614
+ H NI+ L +H M +Y E ++R D+ V D +R+ +
Sbjct: 84 NHFHHPNILGLRDIFVHFEEPAMHKLYLVTE------LMRTDLAQVIHD--QRIVISPQH 135
Query: 615 IVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVV 674
I M H L LH + +VHRD + + DF LAR D +N+T V
Sbjct: 136 IQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTAD-ANKTHYV 194
Query: 675 GTYGYIAPELAYTM-AVTEKCDVYSFGVVALEVL 707
Y APEL T+ D++S G V E+
Sbjct: 195 THRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMF 228
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 92/218 (42%), Gaps = 24/218 (11%)
Query: 516 IGTGGYGSVYRA------QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHR-N 568
+G G +G V A + ++ + VA+K L T + +E ++L I H N
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH--RALMSELKILIHIGHHLN 93
Query: 569 IVKLYGFCLH-NKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVK---SMAHALS 624
+V L G C + +I E+ + G+L LR+ + + ++ K ++ H +
Sbjct: 94 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEF-VPYKTPEDLYKDFLTLEHLIC 152
Query: 625 Y-------LHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLL--HPDSSNRTLVVG 675
Y + + +HRD + DFGLAR + PD +
Sbjct: 153 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 676 TYGYIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHP 712
++APE + T + DV+SFGV+ E+ +G+ P
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 250
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 86/212 (40%), Gaps = 19/212 (8%)
Query: 507 TEDFHIKYCIGTGGYGSVYRAQLSSGKL-VALKKLHRSETEEPAFLESFQTEARLLSQIR 565
++ + +K IG G Y R + + A+K + +S+ + +E LL +
Sbjct: 26 SDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEI------LLRYGQ 79
Query: 566 HRNIVKLYGFCLHNKCMFLIYEYMERGSLF-CVLRNDVEAVELDWTKRVNIVKSMAHALS 624
H NI+ L K ++L+ E M G L +LR + ++ ++ +
Sbjct: 80 HPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKF----FSEREASFVLHTIGKTVE 135
Query: 625 YLHYDCKPSIVHRDXXXXXXXXXXXX---EAF-VADFGLARLLHPDSSNRTLVVGTYGYI 680
YLH +VHRD E + DFG A+ L ++ T ++
Sbjct: 136 YLH---SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFV 192
Query: 681 APELAYTMAVTEKCDVYSFGVVALEVLMGSHP 712
APE+ E CD++S G++ +L G P
Sbjct: 193 APEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 87/205 (42%), Gaps = 23/205 (11%)
Query: 516 IGTGGYG-SVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
IG G +G + + +LVA+K + R E + E+ + E +RH NIV+
Sbjct: 27 IGAGNFGVARLMRDKQANELVAVKYIERGEKID----ENVKREIINHRSLRHPNIVRFKE 82
Query: 575 FCLHNKCMFLIYEYMERGSLFCVL----RNDVEAVELDWTKRVNIVKSMAHALSYLHYDC 630
L + ++ EY G LF + R + + + ++ V S AHA+ H D
Sbjct: 83 VILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGV-SYAHAMQVAHRDL 141
Query: 631 KPSIVHRDXXXXXXXXXXXXEAFVADFGL--ARLLHPDSSNRTLVVGTYGYIAPELAYTM 688
K D +ADFG A +LH S VGT YIAPE+
Sbjct: 142 KLENTLLDGSPAPRLK-------IADFGYSKASVLH---SQPKSAVGTPAYIAPEVLLKK 191
Query: 689 AVTEK-CDVYSFGVVALEVLMGSHP 712
K DV+S GV +L+G++P
Sbjct: 192 EYDGKVADVWSCGVTLYVMLVGAYP 216
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 92/214 (42%), Gaps = 25/214 (11%)
Query: 510 FHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETE-------EPAFL-ESFQTEARLL 561
+ ++ I +G YG+V S G VA+K++ + ++ +FL + E RLL
Sbjct: 24 YTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLL 83
Query: 562 SQIRHRNIVKLYGFCLH--NKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRV-----N 614
+ H NI+ L +H M +Y E ++R D+ V D +R+ +
Sbjct: 84 NHFHHPNILGLRDIFVHFEEPAMHKLYLVTE------LMRTDLAQVIHD--QRIVISPQH 135
Query: 615 IVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVV 674
I M H L LH + +VHRD + + DF LAR D +N+T V
Sbjct: 136 IQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTAD-ANKTHYV 194
Query: 675 GTYGYIAPELAYTM-AVTEKCDVYSFGVVALEVL 707
Y APEL T+ D++S G V E+
Sbjct: 195 THRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMF 228
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 92/207 (44%), Gaps = 19/207 (9%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEP---AFLESFQTEARLLSQIRHRNIVK 571
+G+G + V + + S+G A K + + T+ E + E +L +I+H N++
Sbjct: 19 LGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 572 LYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKS---MAHALSYLHY 628
L+ + + LI E + G LF L E + T+ + + + H+L H+
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 629 DCKPS---IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELA 685
D KP ++ R+ + DFGLA + + + + GT ++APE+
Sbjct: 139 DLKPENIMLLDRNVPKPRIK--------IIDFGLAHKIDFGNEFKN-IFGTPEFVAPEIV 189
Query: 686 YTMAVTEKCDVYSFGVVALEVLMGSHP 712
+ + D++S GV+ +L G+ P
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 95/230 (41%), Gaps = 50/230 (21%)
Query: 516 IGTGGYGSVYRAQ-LSSGKLVALKKL--HRSETEEPAFLESFQTEARLLSQIRHRNIVKL 572
+G GG+ V + L G ALK++ H + E A Q EA + H NI++L
Sbjct: 37 LGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEA-----QREADMHRLFNHPNILRL 91
Query: 573 YGFCLHNKC----MFLIYEYMERGSLFCVLRNDVEAV----------ELDWTKRVNIVKS 618
+CL + +L+ + +RG+L+ N++E + ++ W + I +
Sbjct: 92 VAYCLRERGAKHEAWLLLPFFKRGTLW----NEIERLKDKGNFLTEDQILWL-LLGICRG 146
Query: 619 MA--HALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGL--ARLLHPDSSNRTLVV 674
+ HA Y H D KP+ + + + D G +H + S + L +
Sbjct: 147 LEAIHAKGYAHRDLKPTNI---------LLGDEGQPVLMDLGSMNQACIHVEGSRQALTL 197
Query: 675 GTYG-------YIAPELAYTMA---VTEKCDVYSFGVVALEVLMGSHPTD 714
+ Y APEL + + E+ DV+S G V ++ G P D
Sbjct: 198 QDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYD 247
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 92/213 (43%), Gaps = 23/213 (10%)
Query: 516 IGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
+G G +V+R + +G L A+K + P ++ E +L ++ H+NIVKL+
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQ--MREFEVLKKLNHKNIVKLFA 74
Query: 575 FCLH--NKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKP 632
+ LI E+ GSL+ VL A L ++ + +++ + +++L +
Sbjct: 75 IEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN--- 131
Query: 633 SIVHRDXXXXXXXXXXXXEA----FVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYTM 688
IVHR+ + + DFG AR L D +L GT Y+ P++ Y
Sbjct: 132 GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSL-YGTEEYLHPDM-YER 189
Query: 689 AVTEK---------CDVYSFGVVALEVLMGSHP 712
AV K D++S GV GS P
Sbjct: 190 AVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 92/207 (44%), Gaps = 19/207 (9%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEP---AFLESFQTEARLLSQIRHRNIVK 571
+G+G + V + + S+G A K + + T+ E + E +L +I+H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 572 LYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKS---MAHALSYLHY 628
L+ + + LI E + G LF L E + T+ + + + H+L H+
Sbjct: 79 LHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 629 DCKPS---IVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELA 685
D KP ++ R+ + DFGLA + + + + GT ++APE+
Sbjct: 139 DLKPENIMLLDRNVPKPRIK--------IIDFGLAHKIDFGNEFKN-IFGTPEFVAPEIV 189
Query: 686 YTMAVTEKCDVYSFGVVALEVLMGSHP 712
+ + D++S GV+ +L G+ P
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 91/218 (41%), Gaps = 23/218 (10%)
Query: 516 IGTGGYGSVYRA------QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHR-N 568
+G G +G V A + ++ + VA+K L T + +E ++L I H N
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH--RALMSELKILIHIGHHLN 83
Query: 569 IVKLYGFCLH-NKCMFLIYEYMERGSLFCVLR---NDVEAVELDWTKRVNIVKSMAHALS 624
+V L G C + +I E+ + G+L LR N+ ++ ++ H +
Sbjct: 84 VVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 625 Y-------LHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLH--PDSSNRTLVVG 675
Y + + +HRD + DFGLAR ++ PD +
Sbjct: 144 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 203
Query: 676 TYGYIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHP 712
++APE + T + DV+SFGV+ E+ +G+ P
Sbjct: 204 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 241
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 91/218 (41%), Gaps = 23/218 (10%)
Query: 516 IGTGGYGSVYRA------QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHR-N 568
+G G +G V A + ++ + VA+K L T + +E ++L I H N
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH--RALMSELKILIHIGHHLN 83
Query: 569 IVKLYGFCLH-NKCMFLIYEYMERGSLFCVLR---NDVEAVELDWTKRVNIVKSMAHALS 624
+V L G C + +I E+ + G+L LR N+ ++ ++ H +
Sbjct: 84 VVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 625 Y-------LHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLH--PDSSNRTLVVG 675
Y + + +HRD + DFGLAR ++ PD +
Sbjct: 144 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 203
Query: 676 TYGYIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHP 712
++APE + T + DV+SFGV+ E+ +G+ P
Sbjct: 204 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 241
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 85/203 (41%), Gaps = 18/203 (8%)
Query: 515 CIGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLY 573
+GTG +G V + SG A+K L + + + +E E R+L + +VKL
Sbjct: 48 TLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 574 GFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELD---WTKRVNIVKSMAHALSYLHYDC 630
N ++++ EY+ G +F LR E + ++ + H+L ++ D
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 631 KPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTL-VVGTYGYIAPELAYTMA 689
KP + D V DFG A+ + RT + GT +APE+ +
Sbjct: 168 KPENLLIDQQGYIQ---------VTDFGFAKRV----KGRTWXLCGTPEALAPEIILSKG 214
Query: 690 VTEKCDVYSFGVVALEVLMGSHP 712
+ D ++ GV+ E+ G P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 79/204 (38%), Gaps = 21/204 (10%)
Query: 516 IGTGGYGSVYRAQLS-----SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIV 570
+G G +G V + +G+ VA+K L + + E +L + H NIV
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGN--HIADLKKEIEILRNLYHENIV 86
Query: 571 KLYGFCLHN--KCMFLIYEYMERGSLFCVLRNDVEAVELDWTKR--VNIVKSMAHALSYL 626
K G C + + LI E++ GSL L + + L + V I K M + S
Sbjct: 87 KYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQ 146
Query: 627 HYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYG---YIAPE 683
+ VHRD + + DFGL + + D T+ + APE
Sbjct: 147 Y-------VHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPE 199
Query: 684 LAYTMAVTEKCDVYSFGVVALEVL 707
DV+SFGV E+L
Sbjct: 200 CLMQSKFYIASDVWSFGVTLHELL 223
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 90/218 (41%), Gaps = 23/218 (10%)
Query: 516 IGTGGYGSVYRA------QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHR-N 568
+G G +G V A + ++ + VA+K L T + +E ++L I H N
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH--RALMSELKILIHIGHHLN 83
Query: 569 IVKLYGFCLH-NKCMFLIYEYMERGSLFCVLR---NDVEAVELDWTKRVNIVKSMAHALS 624
+V L G C + +I E+ + G+L LR N+ ++ ++ H +
Sbjct: 84 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 625 Y-------LHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLL--HPDSSNRTLVVG 675
Y + + +HRD + DFGLAR + PD +
Sbjct: 144 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 203
Query: 676 TYGYIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHP 712
++APE + T + DV+SFGV+ E+ +G+ P
Sbjct: 204 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 241
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 79/204 (38%), Gaps = 21/204 (10%)
Query: 516 IGTGGYGSVYRAQLS-----SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIV 570
+G G +G V + +G+ VA+K L + + E +L + H NIV
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGN--HIADLKKEIEILRNLYHENIV 74
Query: 571 KLYGFCLHN--KCMFLIYEYMERGSLFCVLRNDVEAVELDWTKR--VNIVKSMAHALSYL 626
K G C + + LI E++ GSL L + + L + V I K M + S
Sbjct: 75 KYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQ 134
Query: 627 HYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYG---YIAPE 683
+ VHRD + + DFGL + + D T+ + APE
Sbjct: 135 Y-------VHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPE 187
Query: 684 LAYTMAVTEKCDVYSFGVVALEVL 707
DV+SFGV E+L
Sbjct: 188 CLMQSKFYIASDVWSFGVTLHELL 211
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 90/218 (41%), Gaps = 23/218 (10%)
Query: 516 IGTGGYGSVYRA------QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHR-N 568
+G G +G V A + ++ + VA+K L T + +E ++L I H N
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH--RALMSELKILIHIGHHLN 83
Query: 569 IVKLYGFCLH-NKCMFLIYEYMERGSLFCVLR---NDVEAVELDWTKRVNIVKSMAHALS 624
+V L G C + +I E+ + G+L LR N+ ++ ++ H +
Sbjct: 84 VVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 625 Y-------LHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLL--HPDSSNRTLVVG 675
Y + + +HRD + DFGLAR + PD +
Sbjct: 144 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 203
Query: 676 TYGYIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHP 712
++APE + T + DV+SFGV+ E+ +G+ P
Sbjct: 204 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 241
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 92/227 (40%), Gaps = 40/227 (17%)
Query: 516 IGTGGYGSVYRA------QLSSGKLVALKKLHRSE--TEEPAFLESFQTEARLLSQI-RH 566
+G G +G V A + + VA+K L S TE E+ +E ++LS + H
Sbjct: 47 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTER----EALMSELKVLSYLGNH 102
Query: 567 RNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTK--------------- 611
NIV L G C +I EY G L LR ++ T
Sbjct: 103 MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 162
Query: 612 RVNIVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSS--- 668
++ +A +++L + +HRD + DFGLAR + DS+
Sbjct: 163 LLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVV 219
Query: 669 --NRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHP 712
N L V ++APE + T + DV+S+G+ E+ +GS P
Sbjct: 220 KGNARLPV---KWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP 263
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 57/109 (52%), Gaps = 11/109 (10%)
Query: 518 TGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCL 577
G YG ++ ++ L L K HR+ + ESF A ++S++ H+++V YG C+
Sbjct: 32 VGDYGQLHETEVL---LKVLDKAHRN------YSESFFEAASMMSKLSHKHLVLNYGVCV 82
Query: 578 HNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYL 626
L+ E+++ GSL L+ + + + W ++ + K +A A+ +L
Sbjct: 83 CGDENILVQEFVKFGSLDTYLKKNKNCINILW--KLEVAKQLAAAMHFL 129
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 97/225 (43%), Gaps = 29/225 (12%)
Query: 498 ITFEEMIEATEDFHIKYCIGTGGYGSVYRA------QLSSGKLVALKKLHRSETEEPAFL 551
+ F+ M + E+ +G G + V R Q + K++ KKL + ++
Sbjct: 18 LYFQSMYQLFEE------LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQK---- 67
Query: 552 ESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVE-LDWT 610
+ EAR+ ++H NIV+L+ +LI++ + G LF D+ A E
Sbjct: 68 --LEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELF----EDIVAREYYSEA 121
Query: 611 KRVNIVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAF---VADFGLARLLHPDS 667
+ ++ + A+ + H + +VHRD + +ADFGLA + +
Sbjct: 122 DASHCIQQILEAVLHCH---QMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ 178
Query: 668 SNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHP 712
GT GY++PE+ + D+++ GV+ +L+G P
Sbjct: 179 QAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPP 223
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 102/229 (44%), Gaps = 24/229 (10%)
Query: 495 DGRITFEEMIEATEDFHIKYCIGTGGYGSVYRA-QLSSGKLVALKKLHRSE-TEEPAF-L 551
D + FE++ E E IG G + V R +G+ A+K + ++ T P
Sbjct: 17 DDDVLFEDVYELCE------VIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLST 70
Query: 552 ESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFC---VLRNDVEAVELD 608
E + EA + ++H +IV+L + +++++E+M+ G+ C V R D V
Sbjct: 71 EDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMD-GADLCFEIVKRADAGFV--- 126
Query: 609 WTKRV--NIVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAF---VADFGLARLL 663
+++ V + ++ + AL Y H + +I+HRD + + DFG+A L
Sbjct: 127 YSEAVASHYMRQILEALRYCHDN---NIIHRDVKPENVLLASKENSAPVKLGDFGVAIQL 183
Query: 664 HPDSSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHP 712
VGT ++APE+ + DV+ GV+ +L G P
Sbjct: 184 GESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLP 232
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 64/140 (45%), Gaps = 16/140 (11%)
Query: 580 KCMFLIYEYMERGSLFCVL--RNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHR 637
KC+ ++ E ++ G LF + R D E + ++ I+KS+ A+ YLH +I HR
Sbjct: 132 KCLLIVMECLDGGELFSRIQDRGDQAFTEREASE---IMKSIGEAIQYLH---SINIAHR 185
Query: 638 DXXXXXXXXXXXXEAFV---ADFGLARLLHPDSSNRTLVVGTYG--YIAPELAYTMAVTE 692
D + DFG A+ +S+ +L Y Y+APE+ +
Sbjct: 186 DVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDK 242
Query: 693 KCDVYSFGVVALEVLMGSHP 712
CD++S GV+ +L G P
Sbjct: 243 SCDMWSLGVIMYILLCGYPP 262
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 91/218 (41%), Gaps = 23/218 (10%)
Query: 516 IGTGGYGSVYRA------QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHR-N 568
+G G +G V A + ++ + VA+K L T + +E ++L I H N
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH--RALMSELKILIHIGHHLN 94
Query: 569 IVKLYGFCLH-NKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVK---SMAHALS 624
+V L G C + +I E+ + G+L LR+ ++ K ++ H +
Sbjct: 95 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLIC 154
Query: 625 Y-------LHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLH--PDSSNRTLVVG 675
Y + + +HRD + DFGLAR ++ PD +
Sbjct: 155 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 214
Query: 676 TYGYIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHP 712
++APE + T + DV+SFGV+ E+ +G+ P
Sbjct: 215 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 252
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 64/140 (45%), Gaps = 16/140 (11%)
Query: 580 KCMFLIYEYMERGSLFCVL--RNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHR 637
KC+ ++ E ++ G LF + R D E + ++ I+KS+ A+ YLH +I HR
Sbjct: 138 KCLLIVMECLDGGELFSRIQDRGDQAFTEREASE---IMKSIGEAIQYLH---SINIAHR 191
Query: 638 DXXXXXXXXXXXXEAFV---ADFGLARLLHPDSSNRTLVVGTYG--YIAPELAYTMAVTE 692
D + DFG A+ +S+ +L Y Y+APE+ +
Sbjct: 192 DVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDK 248
Query: 693 KCDVYSFGVVALEVLMGSHP 712
CD++S GV+ +L G P
Sbjct: 249 SCDMWSLGVIMYILLCGYPP 268
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 92/227 (40%), Gaps = 40/227 (17%)
Query: 516 IGTGGYGSVYRA------QLSSGKLVALKKLHRSE--TEEPAFLESFQTEARLLSQI-RH 566
+G G +G V A + + VA+K L S TE E+ +E ++LS + H
Sbjct: 31 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTER----EALMSELKVLSYLGNH 86
Query: 567 RNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTK--------------- 611
NIV L G C +I EY G L LR ++ T
Sbjct: 87 MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 146
Query: 612 RVNIVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSS--- 668
++ +A +++L + +HRD + DFGLAR + DS+
Sbjct: 147 LLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVV 203
Query: 669 --NRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHP 712
N L V ++APE + T + DV+S+G+ E+ +GS P
Sbjct: 204 KGNARLPV---KWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP 247
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 64/140 (45%), Gaps = 16/140 (11%)
Query: 580 KCMFLIYEYMERGSLFCVL--RNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHR 637
KC+ ++ E ++ G LF + R D E + ++ I+KS+ A+ YLH +I HR
Sbjct: 102 KCLLIVMECLDGGELFSRIQDRGDQAFTEREASE---IMKSIGEAIQYLH---SINIAHR 155
Query: 638 DXXXXXXXXXXXXEAFV---ADFGLARLLHPDSSNRTLVVGTYG--YIAPELAYTMAVTE 692
D + DFG A+ +S+ +L Y Y+APE+ +
Sbjct: 156 DVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDK 212
Query: 693 KCDVYSFGVVALEVLMGSHP 712
CD++S GV+ +L G P
Sbjct: 213 SCDMWSLGVIMYILLCGYPP 232
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 56/109 (51%), Gaps = 11/109 (10%)
Query: 518 TGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCL 577
G YG ++ ++ L L K HR+ + ESF A ++S++ H+++V YG C
Sbjct: 32 VGDYGQLHETEVL---LKVLDKAHRN------YSESFFEAASMMSKLSHKHLVLNYGVCF 82
Query: 578 HNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYL 626
L+ E+++ GSL L+ + + + W ++ + K +A A+ +L
Sbjct: 83 CGDENILVQEFVKFGSLDTYLKKNKNCINILW--KLEVAKQLAWAMHFL 129
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 64/140 (45%), Gaps = 16/140 (11%)
Query: 580 KCMFLIYEYMERGSLFCVL--RNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHR 637
KC+ ++ E ++ G LF + R D E + ++ I+KS+ A+ YLH +I HR
Sbjct: 92 KCLLIVMECLDGGELFSRIQDRGDQAFTEREASE---IMKSIGEAIQYLH---SINIAHR 145
Query: 638 DXXXXXXXXXXXXEAFV---ADFGLARLLHPDSSNRTLVVGTYG--YIAPELAYTMAVTE 692
D + DFG A+ +S+ +L Y Y+APE+ +
Sbjct: 146 DVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDK 202
Query: 693 KCDVYSFGVVALEVLMGSHP 712
CD++S GV+ +L G P
Sbjct: 203 SCDMWSLGVIMYILLCGYPP 222
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 92/227 (40%), Gaps = 40/227 (17%)
Query: 516 IGTGGYGSVYRA------QLSSGKLVALKKLHRSE--TEEPAFLESFQTEARLLSQI-RH 566
+G G +G V A + + VA+K L S TE E+ +E ++LS + H
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTER----EALMSELKVLSYLGNH 109
Query: 567 RNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTK--------------- 611
NIV L G C +I EY G L LR ++ T
Sbjct: 110 MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 169
Query: 612 RVNIVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSS--- 668
++ +A +++L + +HRD + DFGLAR + DS+
Sbjct: 170 LLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVV 226
Query: 669 --NRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHP 712
N L V ++APE + T + DV+S+G+ E+ +GS P
Sbjct: 227 KGNARLPV---KWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP 270
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 64/140 (45%), Gaps = 16/140 (11%)
Query: 580 KCMFLIYEYMERGSLFCVL--RNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHR 637
KC+ ++ E ++ G LF + R D E + ++ I+KS+ A+ YLH +I HR
Sbjct: 88 KCLLIVMECLDGGELFSRIQDRGDQAFTEREASE---IMKSIGEAIQYLH---SINIAHR 141
Query: 638 DXXXXXXXXXXXXEAFV---ADFGLARLLHPDSSNRTLVVGTYG--YIAPELAYTMAVTE 692
D + DFG A+ +S+ +L Y Y+APE+ +
Sbjct: 142 DVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDK 198
Query: 693 KCDVYSFGVVALEVLMGSHP 712
CD++S GV+ +L G P
Sbjct: 199 SCDMWSLGVIMYILLCGYPP 218
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 64/140 (45%), Gaps = 16/140 (11%)
Query: 580 KCMFLIYEYMERGSLFCVL--RNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHR 637
KC+ ++ E ++ G LF + R D E + ++ I+KS+ A+ YLH +I HR
Sbjct: 94 KCLLIVMECLDGGELFSRIQDRGDQAFTEREASE---IMKSIGEAIQYLH---SINIAHR 147
Query: 638 DXXXXXXXXXXXXEAFV---ADFGLARLLHPDSSNRTLVVGTYG--YIAPELAYTMAVTE 692
D + DFG A+ +S+ +L Y Y+APE+ +
Sbjct: 148 DVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDK 204
Query: 693 KCDVYSFGVVALEVLMGSHP 712
CD++S GV+ +L G P
Sbjct: 205 SCDMWSLGVIMYILLCGYPP 224
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 90/220 (40%), Gaps = 34/220 (15%)
Query: 511 HIKYCIGTGGYGSVYRA----QLSSGKLVALKKLHR-SETEEPAFLESFQTEARLLSQIR 565
H IG G +G VY Q + A+K L R +E ++ +E+F E L+ +
Sbjct: 24 HSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQ---VEAFLREGLLMRGLN 80
Query: 566 HRNIVKLYGFCLHNKCM-FLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSM----- 619
H N++ L G L + + ++ YM G L +R+ +R VK +
Sbjct: 81 HPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRS---------PQRNPTVKDLISFGL 131
Query: 620 --AHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTY 677
A + YL + VHRD VADFGLAR + D ++ +
Sbjct: 132 QVARGMEYL---AEQKFVHRDLAARNCMLDESFTVKVADFGLARDI-LDREYYSVQQHRH 187
Query: 678 G-----YIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHP 712
+ A E T T K DV+SFGV+ E+L P
Sbjct: 188 ARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAP 227
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 92/227 (40%), Gaps = 40/227 (17%)
Query: 516 IGTGGYGSVYRA------QLSSGKLVALKKLHRSE--TEEPAFLESFQTEARLLSQI-RH 566
+G G +G V A + + VA+K L S TE E+ +E ++LS + H
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTER----EALMSELKVLSYLGNH 109
Query: 567 RNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTK--------------- 611
NIV L G C +I EY G L LR ++ T
Sbjct: 110 MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 169
Query: 612 RVNIVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSS--- 668
++ +A +++L + +HRD + DFGLAR + DS+
Sbjct: 170 LLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVV 226
Query: 669 --NRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHP 712
N L V ++APE + T + DV+S+G+ E+ +GS P
Sbjct: 227 KGNARLPV---KWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP 270
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 64/140 (45%), Gaps = 16/140 (11%)
Query: 580 KCMFLIYEYMERGSLFCVL--RNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHR 637
KC+ ++ E ++ G LF + R D E + ++ I+KS+ A+ YLH +I HR
Sbjct: 93 KCLLIVMECLDGGELFSRIQDRGDQAFTEREASE---IMKSIGEAIQYLH---SINIAHR 146
Query: 638 DXXXXXXXXXXXXEAFV---ADFGLARLLHPDSSNRTLVVGTYG--YIAPELAYTMAVTE 692
D + DFG A+ +S+ +L Y Y+APE+ +
Sbjct: 147 DVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDK 203
Query: 693 KCDVYSFGVVALEVLMGSHP 712
CD++S GV+ +L G P
Sbjct: 204 SCDMWSLGVIMYILLCGYPP 223
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 83/201 (41%), Gaps = 18/201 (8%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
IG+G G V A G VA+KKL R + +++ E LL + H+NI+ L
Sbjct: 32 IGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYR-ELVLLKCVNHKNIISLLN 90
Query: 575 FCLHNKCM------FLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHY 628
K + +L+ E M+ C V +ELD + ++ M + +LH
Sbjct: 91 VFTPQKTLEEFQDVYLVMELMDAN--LC----QVIHMELDHERMSYLLYQMLCGIKHLH- 143
Query: 629 DCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYTM 688
I+HRD + DFGLAR + VV Y Y APE+ M
Sbjct: 144 --SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVVTRY-YRAPEVILGM 200
Query: 689 AVTEKCDVYSFGVVALEVLMG 709
D++S G + E++ G
Sbjct: 201 GYAANVDIWSVGCIMGELVKG 221
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 101/230 (43%), Gaps = 28/230 (12%)
Query: 500 FEEMIEATEDFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEAR 559
F+ M + I IG+GG V++ ++ A+K ++ E + L+S++ E
Sbjct: 20 FQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQT-LDSYRNEIA 78
Query: 560 LLSQIRHRN--IVKLYGFCLHNKCMFLIYEYMERG--SLFCVLRNDVEAVELDWTKRVNI 615
L++++ + I++LY + + ++ ++++ ME G L L+ + +D +R +
Sbjct: 79 YLNKLQQHSDKIIRLYDYEITDQYIYMV---MECGNIDLNSWLK---KKKSIDPWERKSY 132
Query: 616 VKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSN--RTLV 673
K+M A+ +H + IVH D + DFG+A + PD +
Sbjct: 133 WKNMLEAVHTIH---QHGIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDXXXVVKDSQ 188
Query: 674 VGTYGYIAPELAYTMAVTEK-----------CDVYSFGVVALEVLMGSHP 712
VGT Y+ PE M+ + + DV+S G + + G P
Sbjct: 189 VGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 238
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 64/140 (45%), Gaps = 16/140 (11%)
Query: 580 KCMFLIYEYMERGSLFCVL--RNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHR 637
KC+ ++ E ++ G LF + R D E + ++ I+KS+ A+ YLH +I HR
Sbjct: 86 KCLLIVMECLDGGELFSRIQDRGDQAFTEREASE---IMKSIGEAIQYLH---SINIAHR 139
Query: 638 DXXXXXXXXXXXXEAFV---ADFGLARLLHPDSSNRTLVVGTYG--YIAPELAYTMAVTE 692
D + DFG A+ +S+ +L Y Y+APE+ +
Sbjct: 140 DVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDK 196
Query: 693 KCDVYSFGVVALEVLMGSHP 712
CD++S GV+ +L G P
Sbjct: 197 SCDMWSLGVIMYILLCGYPP 216
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 92/227 (40%), Gaps = 40/227 (17%)
Query: 516 IGTGGYGSVYRA------QLSSGKLVALKKLHRSE--TEEPAFLESFQTEARLLSQI-RH 566
+G G +G V A + + VA+K L S TE E+ +E ++LS + H
Sbjct: 49 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTER----EALMSELKVLSYLGNH 104
Query: 567 RNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTK--------------- 611
NIV L G C +I EY G L LR ++ T
Sbjct: 105 MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 164
Query: 612 RVNIVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSS--- 668
++ +A +++L + +HRD + DFGLAR + DS+
Sbjct: 165 LLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVV 221
Query: 669 --NRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVL-MGSHP 712
N L V ++APE + T + DV+S+G+ E+ +GS P
Sbjct: 222 KGNARLPV---KWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP 265
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 64/140 (45%), Gaps = 16/140 (11%)
Query: 580 KCMFLIYEYMERGSLFCVL--RNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHR 637
KC+ ++ E ++ G LF + R D E + ++ I+KS+ A+ YLH +I HR
Sbjct: 87 KCLLIVMECLDGGELFSRIQDRGDQAFTEREASE---IMKSIGEAIQYLH---SINIAHR 140
Query: 638 DXXXXXXXXXXXXEAFV---ADFGLARLLHPDSSNRTLVVGTYG--YIAPELAYTMAVTE 692
D + DFG A+ +S+ +L Y Y+APE+ +
Sbjct: 141 DVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDK 197
Query: 693 KCDVYSFGVVALEVLMGSHP 712
CD++S GV+ +L G P
Sbjct: 198 SCDMWSLGVIMYILLCGYPP 217
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 85/203 (41%), Gaps = 19/203 (9%)
Query: 516 IGTGGYG-SVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
IG+G +G + S +LVA+K + R E + E+ + E +RH NIV+
Sbjct: 26 IGSGNFGVARLMRDKQSNELVAVKYIERGEKID----ENVKREIINHRSLRHPNIVRFKE 81
Query: 575 FCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSI 634
L + ++ EY G LF + N A + + + +SY H +
Sbjct: 82 VILTPTHLAIVMEYASGGELFERICN---AGRFSEDEARFFFQQLISGVSYCH---AMQV 135
Query: 635 VHRDXXXXXX--XXXXXXEAFVADFGLAR--LLHPDSSNRTLVVGTYGYIAPELAYTMAV 690
HRD + DFG ++ +LH S VGT YIAPE+
Sbjct: 136 CHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH---SQPKSTVGTPAYIAPEVLLKKEY 192
Query: 691 TEK-CDVYSFGVVALEVLMGSHP 712
K DV+S GV +L+G++P
Sbjct: 193 DGKVADVWSCGVTLYVMLVGAYP 215
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 64/140 (45%), Gaps = 16/140 (11%)
Query: 580 KCMFLIYEYMERGSLFCVL--RNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHR 637
KC+ ++ E ++ G LF + R D E + ++ I+KS+ A+ YLH +I HR
Sbjct: 88 KCLLIVMECLDGGELFSRIQDRGDQAFTEREASE---IMKSIGEAIQYLH---SINIAHR 141
Query: 638 DXXXXXXXXXXXXEAFV---ADFGLARLLHPDSSNRTLVVGTYG--YIAPELAYTMAVTE 692
D + DFG A+ +S+ +L Y Y+APE+ +
Sbjct: 142 DVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDK 198
Query: 693 KCDVYSFGVVALEVLMGSHP 712
CD++S GV+ +L G P
Sbjct: 199 SCDMWSLGVIMYILLCGYPP 218
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 62/140 (44%), Gaps = 16/140 (11%)
Query: 580 KCMFLIYEYMERGSLFCVL--RNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHR 637
KC+ ++ E ++ G LF + R D E + ++ I KS+ A+ YLH +I HR
Sbjct: 132 KCLLIVXECLDGGELFSRIQDRGDQAFTEREASE---IXKSIGEAIQYLH---SINIAHR 185
Query: 638 DXXXXXXXXXXXXEAFV---ADFGLARLLHPDSSNRTLVVGTYG--YIAPELAYTMAVTE 692
D + DFG A+ +S+ +L Y Y+APE+ +
Sbjct: 186 DVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDK 242
Query: 693 KCDVYSFGVVALEVLMGSHP 712
CD +S GV+ +L G P
Sbjct: 243 SCDXWSLGVIXYILLCGYPP 262
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 101/229 (44%), Gaps = 29/229 (12%)
Query: 500 FEEMIEATEDFHIKYCIGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEA 558
FE+M + T + +G G Y V A L +GK A+K + + + + F+
Sbjct: 10 FEDMYKLTSEL-----LGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRV--FREVE 62
Query: 559 RLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKS 618
L ++NI++L F + +L++E ++ GS+ ++ E + ++ +V+
Sbjct: 63 TLYQCQGNKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASR---VVRD 119
Query: 619 MAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAF---VADFGLARLLHPDSS------- 668
+A AL +LH I HRD + + DF L + ++S
Sbjct: 120 VAAALDFLH---TKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTP 176
Query: 669 NRTLVVGTYGYIAPELA--YTMAVT---EKCDVYSFGVVALEVLMGSHP 712
T G+ Y+APE+ +T T ++CD++S GVV +L G P
Sbjct: 177 ELTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPP 225
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 93/218 (42%), Gaps = 28/218 (12%)
Query: 507 TEDFHI-KYCIGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEA--RLLS 562
T+D+ + K +G G G V +G+ ALK L+ S +Q ++
Sbjct: 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQASGGPHIVC 86
Query: 563 QIRHRNIVKLYGFCLHNK-CMFLIYEYMERGSLFCVLRNDVEAVELDWTKR--VNIVKSM 619
I+ +Y H K C+ +I E ME G LF ++ E + +T+R I++ +
Sbjct: 87 ------ILDVYENMHHGKRCLLIIMECMEGGELFSRIQ---ERGDQAFTEREAAEIMRDI 137
Query: 620 AHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFV---ADFGLARLLHPDSSNRTLVVGT 676
A+ +LH +I HRD + V DFG A+ +++ L
Sbjct: 138 GTAIQFLH---SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK----ETTQNALQTPC 190
Query: 677 YG--YIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHP 712
Y Y+APE+ + CD++S GV+ +L G P
Sbjct: 191 YTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPP 228
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 93/218 (42%), Gaps = 28/218 (12%)
Query: 507 TEDFHI-KYCIGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEA--RLLS 562
T+D+ + K +G G G V +G+ ALK L+ S +Q ++
Sbjct: 8 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQASGGPHIVC 67
Query: 563 QIRHRNIVKLYGFCLHNK-CMFLIYEYMERGSLFCVLRNDVEAVELDWTKR--VNIVKSM 619
I+ +Y H K C+ +I E ME G LF ++ E + +T+R I++ +
Sbjct: 68 ------ILDVYENMHHGKRCLLIIMECMEGGELFSRIQ---ERGDQAFTEREAAEIMRDI 118
Query: 620 AHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFV---ADFGLARLLHPDSSNRTLVVGT 676
A+ +LH +I HRD + V DFG A+ +++ L
Sbjct: 119 GTAIQFLH---SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK----ETTQNALQTPC 171
Query: 677 YG--YIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHP 712
Y Y+APE+ + CD++S GV+ +L G P
Sbjct: 172 YTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPP 209
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 103/244 (42%), Gaps = 43/244 (17%)
Query: 504 IEATEDFHIKYCIGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLS 562
+ +++ IK+ IG G YG VY A ++ K VA+KK++R E+ + E +L+
Sbjct: 22 VHVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRM-FEDLIDCKRILREITILN 80
Query: 563 QIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHA 622
+++ I++LY + + + ++ L+ VL ++ +L + I + H
Sbjct: 81 RLKSDYIIRLYDLIIPD-------DLLKFDELYIVL--EIADSDLKKLFKTPIFLTEEHI 131
Query: 623 LSYLH-------YDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLH----------- 664
+ L+ + + I+HRD V DFGLAR ++
Sbjct: 132 KTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDL 191
Query: 665 -----PDSSNRTLV------VGTYGYIAPELAYTMA-VTEKCDVYSFGVVALEVL--MGS 710
P N+ L V T Y APEL T+ D++S G + E+L + S
Sbjct: 192 EENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQS 251
Query: 711 HPTD 714
H D
Sbjct: 252 HIND 255
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 83/201 (41%), Gaps = 22/201 (10%)
Query: 516 IGTGGYGSV---YRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKL 572
IG+G G V Y A L VA+KKL R + +++ E L+ + H+NI+ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGL 88
Query: 573 YGFCLHNKCM------FLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYL 626
K + +++ E M+ C V +ELD + ++ M + +L
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMDAN--LC----QVIQMELDHERMSYLLYQMLCGIKHL 142
Query: 627 HYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAY 686
H I+HRD + DFGLAR VV Y Y APE+
Sbjct: 143 H---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRY-YRAPEVIL 198
Query: 687 TMAVTEKCDVYSFGVVALEVL 707
M E D++S G + E++
Sbjct: 199 GMGYKENVDIWSVGCIMGEMV 219
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 64/140 (45%), Gaps = 16/140 (11%)
Query: 580 KCMFLIYEYMERGSLFCVL--RNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHR 637
KC+ ++ E ++ G LF + R D E + ++ I+KS+ A+ YLH +I HR
Sbjct: 86 KCLLIVMECLDGGELFSRIQDRGDQAFTEREASE---IMKSIGEAIQYLH---SINIAHR 139
Query: 638 DXXXXXXXXXXXXEAFV---ADFGLARLLHPDSSNRTLVVGTYG--YIAPELAYTMAVTE 692
D + DFG A+ +S+ +L Y Y+APE+ +
Sbjct: 140 DVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTEPCYTPYYVAPEVLGPEKYDK 196
Query: 693 KCDVYSFGVVALEVLMGSHP 712
CD++S GV+ +L G P
Sbjct: 197 SCDMWSLGVIMYILLCGYPP 216
>pdb|4B8C|D Chain D, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|J Chain J, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|K Chain K, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|L Chain L, Nuclease Module Of The Yeast Ccr4-Not Complex
Length = 727
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
Query: 45 LEKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTGTIPSEXXXXXXXXXXXXXXXXXX 104
L +L L+ NSLT +P+EI LS L+VLDLS+NRLT ++P+E
Sbjct: 249 LTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAE-LGSCFQLKYFYFFDNMV 305
Query: 105 XXXPLEFGNLKDLDQLRLQGNKLD 128
P EFGNL +L L ++GN L+
Sbjct: 306 TTLPWEFGNLCNLQFLGVEGNPLE 329
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Query: 213 LDRLHLNGNNLTGSIPSTIGYLNLLDELHLSHNRLDGPIPPTIGNLTNLIALDLSSNQLS 272
L RL+LNGN+LT +P+ I L+ L L LSHNRL +P +G+ L N ++
Sbjct: 249 LTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLTS-LPAELGSCFQLKYFYFFDNMVT 306
Query: 273 GLLPREVGNLKYLASLSLNGNIL 295
LP E GNL L L + GN L
Sbjct: 307 -TLPWEFGNLCNLQFLGVEGNPL 328
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 62/143 (43%), Gaps = 40/143 (27%)
Query: 117 LDQLRLQGNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNLKSLFLDNNHLS 176
L +L L GN L L P+ I NL+NL LDLS N+L+ LP E+G+ LK +
Sbjct: 249 LTRLYLNGNSLTEL-PAEIKNLSNLRVLDLSHNRLTS-LPAELGSCFQLKYFYF------ 300
Query: 177 GPIPSTLYHLNQLATLCLGYNKLVGPVTKEVGNMKNLDRLHLNGNNLTGSIPSTIGYLNL 236
++ +V + E GN+ NL L + GN P +L +
Sbjct: 301 -------------------FDNMVTTLPWEFGNLCNLQFLGVEGN------PLEKQFLKI 335
Query: 237 LDE-------LHLSHNRLDGPIP 252
L E +L NR + P+P
Sbjct: 336 LTEKSVTGLIFYLRDNRPEIPLP 358
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 5/63 (7%)
Query: 226 SIPSTIGYLNLLDELHLSHNRLDGPIPPTIGNLTNLIALDLSSNQLSGLLPREVGN---L 282
+I + I + L L+L+ N L +P I NL+NL LDLS N+L+ LP E+G+ L
Sbjct: 238 NISANIFKYDFLTRLYLNGNSL-TELPAEIKNLSNLRVLDLSHNRLTS-LPAELGSCFQL 295
Query: 283 KYL 285
KY
Sbjct: 296 KYF 298
>pdb|3RFJ|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 279
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 67/151 (44%), Gaps = 4/151 (2%)
Query: 120 LRLQGNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEV-GNLKNLKSLFLDNNHLSGP 178
L L GNKL + S++ LTNLTYL L+ NQL LP V L NLK L L N L
Sbjct: 68 LALGGNKLHDI--SALKELTNLTYLILTGNQLQS-LPNGVFDKLTNLKELVLVENQLQSL 124
Query: 179 IPSTLYHLNQLATLCLGYNKLVGPVTKEVGNMKNLDRLHLNGNNLTGSIPSTIGYLNLLD 238
L L L L +N+L + NL RL L+ N L L L
Sbjct: 125 PDGVFDKLTNLTYLYLYHNQLQSLPKGVFDKLTNLTRLDLDNNQLQSLPEGVFDKLTQLK 184
Query: 239 ELHLSHNRLDGPIPPTIGNLTNLIALDLSSN 269
+L L+ N+L LT+L + L +N
Sbjct: 185 QLSLNDNQLKSVPDGVFDRLTSLTHIWLLNN 215
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 43/90 (47%), Gaps = 2/90 (2%)
Query: 111 FGNLKDLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEV-GNLKNLKSLF 169
F L +L +L L N+L L LTNLTYL L NQL LP+ V L NL L
Sbjct: 105 FDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLYLYHNQLQS-LPKGVFDKLTNLTRLD 163
Query: 170 LDNNHLSGPIPSTLYHLNQLATLCLGYNKL 199
LDNN L L QL L L N+L
Sbjct: 164 LDNNQLQSLPEGVFDKLTQLKQLSLNDNQL 193
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 55/139 (39%), Gaps = 2/139 (1%)
Query: 157 QEVGNLKNLKSLFLDNNHLSGPIPSTLYHLNQLATLCLGYNKLVGPVTKEVGNMKNLDRL 216
Q + L N++ L L N L S L L L L L N+L + NL L
Sbjct: 57 QGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKEL 114
Query: 217 HLNGNNLTGSIPSTIGYLNLLDELHLSHNRLDGPIPPTIGNLTNLIALDLSSNQLSGLLP 276
L N L L L L+L HN+L LTNL LDL +NQL L
Sbjct: 115 VLVENQLQSLPDGVFDKLTNLTYLYLYHNQLQSLPKGVFDKLTNLTRLDLDNNQLQSLPE 174
Query: 277 REVGNLKYLASLSLNGNIL 295
L L LSLN N L
Sbjct: 175 GVFDKLTQLKQLSLNDNQL 193
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 111 FGNLKDLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEV-GNLKNLKSLF 169
F L +L L L N+L L LTNLT LDL NQL LP+ V L LK L
Sbjct: 129 FDKLTNLTYLYLYHNQLQSLPKGVFDKLTNLTRLDLDNNQLQS-LPEGVFDKLTQLKQLS 187
Query: 170 LDNNHLSGPIPSTLY 184
L++N L +P ++
Sbjct: 188 LNDNQLKS-VPDGVF 201
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 80/206 (38%), Gaps = 8/206 (3%)
Query: 509 DFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHR 567
DF+ +G G +G V ++ + +L A+K L + + +E E R+L+
Sbjct: 21 DFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKP 80
Query: 568 NIVKLYGFCLHN-KCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYL 626
+ C ++ + EY+ G L ++ + V +A L +L
Sbjct: 81 PFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQ---QVGRFKEPHAVFYAAEIAIGLFFL 137
Query: 627 HYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAY 686
I++RD +ADFG+ + D GT YIAPE+
Sbjct: 138 Q---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIA 194
Query: 687 TMAVTEKCDVYSFGVVALEVLMGSHP 712
+ D ++FGV+ E+L G P
Sbjct: 195 YQPYGKSVDWWAFGVLLYEMLAGQAP 220
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 94/216 (43%), Gaps = 23/216 (10%)
Query: 507 TEDFHIKYCIGTGGYGSVYRA------QLSSGKLVALKKLHRSETEEPAFLESFQTEARL 560
TE++ + +G G + V R Q + ++ KKL + ++ + EAR+
Sbjct: 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQK------LEREARI 63
Query: 561 LSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVE-LDWTKRVNIVKSM 619
++H NIV+L+ +LI++ + G LF D+ A E + ++ +
Sbjct: 64 CRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELF----EDIVAREYYSEADASHCIQQI 119
Query: 620 AHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAF---VADFGLARLLHPDSSNRTLVVGT 676
A+ + H + +VHR+ + +ADFGLA + + GT
Sbjct: 120 LEAVLHCH---QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGT 176
Query: 677 YGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHP 712
GY++PE+ + D+++ GV+ +L+G P
Sbjct: 177 PGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPP 212
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 83/203 (40%), Gaps = 19/203 (9%)
Query: 516 IGTGGYG-SVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
IG+G +G + S +LVA+K + R E + + E +RH NIV+
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEK----IAANVKREIINHRSLRHPNIVRFKE 82
Query: 575 FCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSI 634
L + ++ EY G LF + N A + + + +SY H +
Sbjct: 83 VILTPTHLAIVMEYASGGELFERICN---AGRFSEDEARFFFQQLISGVSYCH---AMQV 136
Query: 635 VHRDXXXXXX--XXXXXXEAFVADFGLAR--LLHPDSSNRTLVVGTYGYIAPELAYTMAV 690
HRD + DFG ++ +LH S VGT YIAPE+
Sbjct: 137 CHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH---SQPKSTVGTPAYIAPEVLLKKEY 193
Query: 691 TEK-CDVYSFGVVALEVLMGSHP 712
K DV+S GV +L+G++P
Sbjct: 194 DGKVADVWSCGVTLYVMLVGAYP 216
>pdb|3ZYN|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
pdb|3ZYN|B Chain B, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
Length = 321
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 93/189 (49%), Gaps = 5/189 (2%)
Query: 111 FGNLKDLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNLKSLFL 170
F +L+ L+ L+L N + + + L +L L+L N+L+ Q L L+ L+L
Sbjct: 55 FKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWL 114
Query: 171 DNNHLSGPIPSTLYH-LNQLATLCLGYNKLVGPVTKEV-GNMKNLDRLHLNGNNLTGSIP 228
NN + IPS ++ + L L LG K + +++ + NL L+L NL IP
Sbjct: 115 RNNPIES-IPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNLK-DIP 172
Query: 229 STIGYLNLLDELHLSHNRLDGPIPPTIGNLTNLIALDLSSNQLSGLLPREVGNLKYLASL 288
+ + L +EL LS NRLD P + LT+L L L Q++ + +LK L L
Sbjct: 173 NLTALVRL-EELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEEL 231
Query: 289 SLNGNILIG 297
+L+ N L+
Sbjct: 232 NLSHNNLMS 240
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 93/209 (44%), Gaps = 11/209 (5%)
Query: 42 LSKLEKLVLSHNSLTGRIPSEIGA---LSRLKVLDLSYNRLTGTIPSEXXXXXXXXXXXX 98
L LE L LS N L +I E+GA L L L+L NRLT T+P++
Sbjct: 58 LRHLEILQLSKN-LVRKI--EVGAFNGLPSLNTLELFDNRLT-TVPTQAFEYLSKLRELW 113
Query: 99 XXXXXXXXXP-LEFGNLKDLDQLRL-QGNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLP 156
P F + L +L L + +L+ + ++ L NL YL+L + L +P
Sbjct: 114 LRNNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNLKD-IP 172
Query: 157 QEVGNLKNLKSLFLDNNHLSGPIPSTLYHLNQLATLCLGYNKLVGPVTKEVGNMKNLDRL 216
+ L L+ L L N L P + L L L L + ++ ++K+L+ L
Sbjct: 173 N-LTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEEL 231
Query: 217 HLNGNNLTGSIPSTIGYLNLLDELHLSHN 245
+L+ NNL L+ L+ +HL+HN
Sbjct: 232 NLSHNNLMSLPHDLFTPLHRLERVHLNHN 260
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 78/192 (40%), Gaps = 8/192 (4%)
Query: 523 SVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKC 581
VY A+ + ++VALK + + +P F Q EAR +++ ++V ++ F +
Sbjct: 49 DVYEAEDTVRERIVALKLXSETLSSDPVFRTRXQREARTAGRLQEPHVVPIHDFGEIDGQ 108
Query: 582 MFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDXXX 641
+++ + L LR L + V IV+ + S L HRD
Sbjct: 109 LYVDXRLINGVDLAAXLRRQGP---LAPPRAVAIVRQIG---SALDAAHAAGATHRDVKP 162
Query: 642 XXXXXXXXXEAFVADFGLARLLHPDS-SNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFG 700
A++ DFG+A + + VGT Y APE T + D+Y+
Sbjct: 163 ENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYXAPERFSESHATYRADIYALT 222
Query: 701 VVALEVLMGSHP 712
V E L GS P
Sbjct: 223 CVLYECLTGSPP 234
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 78/206 (37%), Gaps = 20/206 (9%)
Query: 516 IGTGGYGSVYRAQL------SSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNI 569
+G G +G VY + VA+K ++ S + F EA ++ ++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI--EFLNEASVMKGFTCHHV 82
Query: 570 VKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELD-------WTKRVNIVKSMAHA 622
V+L G + ++ E M G L LR+ E + + + + +A
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 623 LSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVG--TYGYI 680
++YL+ VHRD + DFG+ R + R G ++
Sbjct: 143 MAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 199
Query: 681 APELAYTMAVTEKCDVYSFGVVALEV 706
APE T D++SFGVV E+
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 80/206 (38%), Gaps = 20/206 (9%)
Query: 516 IGTGGYGSVYRAQL------SSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNI 569
+G G +G VY + VA+K ++ S + F EA ++ ++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI--EFLNEASVMKGFTCHHV 82
Query: 570 VKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELD-------WTKRVNIVKSMAHA 622
V+L G + ++ E M G L LR+ E + + + + +A
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 623 LSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVG--TYGYI 680
++YL+ VHRD + DFG+ R ++ + R G ++
Sbjct: 143 MAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWM 199
Query: 681 APELAYTMAVTEKCDVYSFGVVALEV 706
APE T D++SFGVV E+
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 78/206 (37%), Gaps = 20/206 (9%)
Query: 516 IGTGGYGSVYRAQL------SSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNI 569
+G G +G VY + VA+K ++ S + F EA ++ ++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI--EFLNEASVMKGFTCHHV 82
Query: 570 VKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELD-------WTKRVNIVKSMAHA 622
V+L G + ++ E M G L LR+ E + + + + +A
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 623 LSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVG--TYGYI 680
++YL+ VHRD + DFG+ R + R G ++
Sbjct: 143 MAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 199
Query: 681 APELAYTMAVTEKCDVYSFGVVALEV 706
APE T D++SFGVV E+
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|2ID5|A Chain A, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|B Chain B, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|C Chain C, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|D Chain D, Crystal Structure Of The Lingo-1 Ectodomain
Length = 477
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 115/302 (38%), Gaps = 52/302 (17%)
Query: 43 SKLEKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTGTIPSEXXXXXXXXXXXXXXXX 102
S ++ VL H +P I +RL LDL NR+ E
Sbjct: 10 SAQDRAVLCHRKRFVAVPEGIPTETRL--LDLGKNRIKTLNQDEFASFPHLEELELNENI 67
Query: 103 XXXXXPLEFGNLKDLDQLRLQGNKLDGLIPSSI-GNLTNLTYLDLSLNQLSGRLPQEVGN 161
P F NL +L L L+ N+L LIP + L+NLT LD+S N++ L +
Sbjct: 68 VSAVEPGAFNNLFNLRTLGLRSNRLK-LIPLGVFTGLSNLTKLDISENKIVILLDYMFQD 126
Query: 162 LKNLKSLFLDNN-----------------------------------HLSGPIPSTLYHL 186
L NLKSL + +N HL G I L HL
Sbjct: 127 LYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHL 186
Query: 187 NQLATLCLGYNKLVGPVTKEVGNMKNLDRLHLN---GNNLTG---------SIPS-TIGY 233
N A + +L E+ + LD + N G NLT ++P + +
Sbjct: 187 NINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRH 246
Query: 234 LNLLDELHLSHNRLDGPIPPTIGNLTNLIALDLSSNQLSGLLPREVGNLKYLASLSLNGN 293
L L L+LS+N + + L L + L QL+ + P L YL L+++GN
Sbjct: 247 LVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGN 306
Query: 294 IL 295
L
Sbjct: 307 QL 308
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 46/103 (44%)
Query: 194 LGYNKLVGPVTKEVGNMKNLDRLHLNGNNLTGSIPSTIGYLNLLDELHLSHNRLDGPIPP 253
LG N++ E + +L+ L LN N ++ P L L L L NRL
Sbjct: 39 LGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLG 98
Query: 254 TIGNLTNLIALDLSSNQLSGLLPREVGNLKYLASLSLNGNILI 296
L+NL LD+S N++ LL +L L SL + N L+
Sbjct: 99 VFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLV 141
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 99/224 (44%), Gaps = 26/224 (11%)
Query: 499 TFEEMIEATEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTE 557
+F+ + +++ I IG G YG V A+ +G+ VA+KK+ + + + E
Sbjct: 46 SFDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLR-E 104
Query: 558 ARLLSQIRHRNIVKL---------YGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELD 608
++L +H NI+ + YG K ++++ + ME L ++ + + + L+
Sbjct: 105 LKILKHFKHDNIIAIKDILRPTVPYG---EFKSVYVVLDLME-SDLHQIIHSS-QPLTLE 159
Query: 609 WTKRVNIVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSS 668
+ + + L Y+H ++HRD E + DFG+AR L +
Sbjct: 160 HVR--YFLYQLLRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPA 214
Query: 669 NR----TLVVGTYGYIAPELAYTM-AVTEKCDVYSFGVVALEVL 707
T V T Y APEL ++ T+ D++S G + E+L
Sbjct: 215 EHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEML 258
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 79/206 (38%), Gaps = 20/206 (9%)
Query: 516 IGTGGYGSVYRAQL------SSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNI 569
+G G +G VY + VA+K ++ S + F EA ++ ++
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI--EFLNEASVMKGFTCHHV 81
Query: 570 VKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELD-------WTKRVNIVKSMAHA 622
V+L G + ++ E M G L LR+ E + + + + +A
Sbjct: 82 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 141
Query: 623 LSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVG--TYGYI 680
++YL+ VHRD + DFG+ R ++ R G ++
Sbjct: 142 MAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 198
Query: 681 APELAYTMAVTEKCDVYSFGVVALEV 706
APE T D++SFGVV E+
Sbjct: 199 APESLKDGVFTTSSDMWSFGVVLWEI 224
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 101/237 (42%), Gaps = 32/237 (13%)
Query: 493 NYDGRITFEEMIEATED-FHIKYC-IGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAF 550
+YD ++ E ED F + C +G G YG VY+A+ GK L + E
Sbjct: 4 DYDFKVKLSSERERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYAL--KQIEGTGI 61
Query: 551 LESFQTEARLLSQIRHRNIVKLYG-FCLH-NKCMFLIYEYMERGSLFCVLRNDVEAVELD 608
S E LL +++H N++ L F H ++ ++L+++Y E + +
Sbjct: 62 SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKAN-- 119
Query: 609 WTKRVNIVKSMAHALSY-----LHYDCKPSIVHRDXXXXXXXXX----XXXEAFVADFGL 659
K V + + M +L Y +HY ++HRD +AD G
Sbjct: 120 -KKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGF 178
Query: 660 ARL----LHPDSSNRTLVVGTYGYIAPEL-----AYTMAVTEKCDVYSFGVVALEVL 707
ARL L P + +VV T+ Y APEL YT A+ D+++ G + E+L
Sbjct: 179 ARLFNSPLKPLADLDPVVV-TFWYRAPELLLGARHYTKAI----DIWAIGCIFAELL 230
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 78/206 (37%), Gaps = 20/206 (9%)
Query: 516 IGTGGYGSVYRAQL------SSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNI 569
+G G +G VY + VA+K ++ S + F EA ++ ++
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI--EFLNEASVMKGFTCHHV 79
Query: 570 VKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELD-------WTKRVNIVKSMAHA 622
V+L G + ++ E M G L LR+ E + + + + +A
Sbjct: 80 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 139
Query: 623 LSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVG--TYGYI 680
++YL+ VHRD + DFG+ R + R G ++
Sbjct: 140 MAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 196
Query: 681 APELAYTMAVTEKCDVYSFGVVALEV 706
APE T D++SFGVV E+
Sbjct: 197 APESLKDGVFTTSSDMWSFGVVLWEI 222
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 78/171 (45%), Gaps = 25/171 (14%)
Query: 555 QTEARLLSQIRHRNIVKLYGFCLHN---KCMFLIYEYMERGSLFCVLRNDVEAVELDWTK 611
+ E +LL ++RH+N+++L L+N + M+++ EY C ++ +++V K
Sbjct: 54 KKEIQLLRRLRHKNVIQLVDV-LYNEEKQKMYMVMEY-----CVCGMQEMLDSVP---EK 104
Query: 612 RVNIVKSMAH------ALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHP 665
R + ++ + L YLH IVH+D ++ G+A LHP
Sbjct: 105 RFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAEALHP 161
Query: 666 DSSNRTLVV--GTYGYIAPELAYTMAVTE--KCDVYSFGVVALEVLMGSHP 712
+++ T G+ + PE+A + K D++S GV + G +P
Sbjct: 162 FAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYP 212
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 95/229 (41%), Gaps = 24/229 (10%)
Query: 495 DGRITFEEMIEATEDFHIKYCIGTGGYGSVYRA-QLSSGKLVALKKLHRSE-TEEPAF-L 551
D + FE++ E E IG G + V R +G+ A+K + ++ T P
Sbjct: 19 DDDVLFEDVYELCE------VIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLST 72
Query: 552 ESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFC---VLRNDV-----E 603
E + EA + ++H +IV+L + +++++E+M+ G+ C V R D E
Sbjct: 73 EDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMD-GADLCFEIVKRADAGFVYSE 131
Query: 604 AVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLL 663
AV + +++ H + +H D KP V + FG+A L
Sbjct: 132 AVASHYMRQILEALRYCHDNNIIHRDVKPHCV------LLASKENSAPVKLGGFGVAIQL 185
Query: 664 HPDSSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHP 712
VGT ++APE+ + DV+ GV+ +L G P
Sbjct: 186 GESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLP 234
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 79/206 (38%), Gaps = 20/206 (9%)
Query: 516 IGTGGYGSVYRAQL------SSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNI 569
+G G +G VY + VA+K ++ S + F EA ++ ++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI--EFLNEASVMKGFTCHHV 82
Query: 570 VKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELD-------WTKRVNIVKSMAHA 622
V+L G + ++ E M G L LR+ E + + + + +A
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 623 LSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVG--TYGYI 680
++YL+ VHRD + DFG+ R ++ R G ++
Sbjct: 143 MAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 199
Query: 681 APELAYTMAVTEKCDVYSFGVVALEV 706
APE T D++SFGVV E+
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 99/224 (44%), Gaps = 26/224 (11%)
Query: 499 TFEEMIEATEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTE 557
+F+ + +++ I IG G YG V A+ +G+ VA+KK+ + + + E
Sbjct: 45 SFDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLR-E 103
Query: 558 ARLLSQIRHRNIVKL---------YGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELD 608
++L +H NI+ + YG K ++++ + ME L ++ + + + L+
Sbjct: 104 LKILKHFKHDNIIAIKDILRPTVPYG---EFKSVYVVLDLME-SDLHQIIHSS-QPLTLE 158
Query: 609 WTKRVNIVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSS 668
+ + + L Y+H ++HRD E + DFG+AR L +
Sbjct: 159 HVR--YFLYQLLRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPA 213
Query: 669 NR----TLVVGTYGYIAPELAYTM-AVTEKCDVYSFGVVALEVL 707
T V T Y APEL ++ T+ D++S G + E+L
Sbjct: 214 EHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEML 257
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 80/206 (38%), Gaps = 8/206 (3%)
Query: 509 DFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHR 567
DF+ +G G +G V ++ + +L A+K L + + +E E R+L+
Sbjct: 342 DFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKP 401
Query: 568 NIVKLYGFCLHN-KCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYL 626
+ C ++ + EY+ G L ++ + V +A L +L
Sbjct: 402 PFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQ---QVGRFKEPHAVFYAAEIAIGLFFL 458
Query: 627 HYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAY 686
I++RD +ADFG+ + D GT YIAPE+
Sbjct: 459 Q---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIA 515
Query: 687 TMAVTEKCDVYSFGVVALEVLMGSHP 712
+ D ++FGV+ E+L G P
Sbjct: 516 YQPYGKSVDWWAFGVLLYEMLAGQAP 541
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 95/229 (41%), Gaps = 24/229 (10%)
Query: 495 DGRITFEEMIEATEDFHIKYCIGTGGYGSVYRA-QLSSGKLVALKKLHRSE-TEEPAF-L 551
D + FE++ E E IG G + V R +G+ A+K + ++ T P
Sbjct: 17 DDDVLFEDVYELCE------VIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLST 70
Query: 552 ESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFC---VLRNDV-----E 603
E + EA + ++H +IV+L + +++++E+M+ G+ C V R D E
Sbjct: 71 EDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMD-GADLCFEIVKRADAGFVYSE 129
Query: 604 AVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLL 663
AV + +++ H + +H D KP V + FG+A L
Sbjct: 130 AVASHYMRQILEALRYCHDNNIIHRDVKPHCV------LLASKENSAPVKLGGFGVAIQL 183
Query: 664 HPDSSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHP 712
VGT ++APE+ + DV+ GV+ +L G P
Sbjct: 184 GESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLP 232
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 75/183 (40%), Gaps = 16/183 (8%)
Query: 531 SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHN--KCMFLIYEY 588
+G++VA+K L E P +Q E +L + H +IVK G C K + L+ EY
Sbjct: 36 TGEMVAVKAL--KEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEY 93
Query: 589 MERGSLFCVL-RNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXX 647
+ GSL L R+ V +L + + + ++YLH +HR
Sbjct: 94 VPLGSLRDYLPRHCVGLAQL-----LLFAQQICEGMAYLH---AQHYIHRALAARNVLLD 145
Query: 648 XXXEAFVADFGLARLL---HPDSSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVAL 704
+ DFGLA+ + H R + APE DV+SFGV
Sbjct: 146 NDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLY 205
Query: 705 EVL 707
E+L
Sbjct: 206 ELL 208
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 84/203 (41%), Gaps = 19/203 (9%)
Query: 516 IGTGGYG-SVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
IG+G +G + S +LVA+K + R E + E+ + E +RH NIV+
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKID----ENVKREIINHRSLRHPNIVRFKE 82
Query: 575 FCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSI 634
L + ++ EY G LF + N A + + + +SY H +
Sbjct: 83 VILTPTHLAIVMEYASGGELFERICN---AGRFSEDEARFFFQQLISGVSYCH---AMQV 136
Query: 635 VHRDXXXXXX--XXXXXXEAFVADFGLAR--LLHPDSSNRTLVVGTYGYIAPELAYTMAV 690
HRD + FG ++ +LH S VGT YIAPE+
Sbjct: 137 CHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLH---SQPKSTVGTPAYIAPEVLLKKEY 193
Query: 691 TEK-CDVYSFGVVALEVLMGSHP 712
K DV+S GV +L+G++P
Sbjct: 194 DGKVADVWSCGVTLYVMLVGAYP 216
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 75/183 (40%), Gaps = 16/183 (8%)
Query: 531 SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHN--KCMFLIYEY 588
+G++VA+K L E P +Q E +L + H +IVK G C K + L+ EY
Sbjct: 37 TGEMVAVKAL--KEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEY 94
Query: 589 MERGSLFCVL-RNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXX 647
+ GSL L R+ V +L + + + ++YLH +HR
Sbjct: 95 VPLGSLRDYLPRHCVGLAQL-----LLFAQQICEGMAYLH---AQHYIHRALAARNVLLD 146
Query: 648 XXXEAFVADFGLARLL---HPDSSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVAL 704
+ DFGLA+ + H R + APE DV+SFGV
Sbjct: 147 NDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLY 206
Query: 705 EVL 707
E+L
Sbjct: 207 ELL 209
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 102/244 (41%), Gaps = 46/244 (18%)
Query: 504 IEATEDFHIKYCIGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLS 562
++ +++ IK+ IG G YG VY A ++ K VA+KK++R E+ + E +L+
Sbjct: 24 VKVPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRM-FEDLIDCKRILREITILN 82
Query: 563 QIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHA 622
+++ I++L+ + + + ++ L+ VL ++ +L + I + H
Sbjct: 83 RLKSDYIIRLHD-------LIIPEDLLKFDELYIVL--EIADSDLKKLFKTPIFLTEQHV 133
Query: 623 LSYLH-------YDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSS------- 668
+ L+ + + I+HRD + DFGLAR ++ D
Sbjct: 134 KTILYNLLLGEKFIHESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDL 193
Query: 669 ------------NRTLV------VGTYGYIAPELAYTMA-VTEKCDVYSFGVVALEVL-- 707
N+ L V T Y APEL T D++S G + E+L
Sbjct: 194 EEKEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNM 253
Query: 708 MGSH 711
M SH
Sbjct: 254 MKSH 257
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 84/203 (41%), Gaps = 19/203 (9%)
Query: 516 IGTGGYG-SVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574
IG+G +G + S +LVA+K + R E + E+ + E +RH NIV+
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKID----ENVKREIINHRSLRHPNIVRFKE 82
Query: 575 FCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSI 634
L + ++ EY G LF + N A + + + +SY H +
Sbjct: 83 VILTPTHLAIVMEYASGGELFERICN---AGRFSEDEARFFFQQLISGVSYCH---AMQV 136
Query: 635 VHRDXXXXXX--XXXXXXEAFVADFGLAR--LLHPDSSNRTLVVGTYGYIAPELAYTMAV 690
HRD + FG ++ +LH + VGT YIAPE+
Sbjct: 137 CHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKD---TVGTPAYIAPEVLLKKEY 193
Query: 691 TEK-CDVYSFGVVALEVLMGSHP 712
K DV+S GV +L+G++P
Sbjct: 194 DGKVADVWSCGVTLYVMLVGAYP 216
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 92/213 (43%), Gaps = 27/213 (12%)
Query: 516 IGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQ--IRHRNI--- 569
+G G YG V + + + SG+++A+K++ + Q + RLL I R +
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNS--------QEQKRLLMDLDISMRTVDCP 66
Query: 570 --VKLYGFCLHNKCMFLIYEYMERG--SLFCVLRNDVEAVELDWTKRVNIVKSMAHALSY 625
V YG +++ E M+ + + + + + D ++ + S+ AL +
Sbjct: 67 FTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAV--SIVKALEH 124
Query: 626 LHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELA 685
LH K S++HRD + + DFG++ L D + + + G Y+APE
Sbjct: 125 LH--SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVA-KDIDAGCKPYMAPERI 181
Query: 686 ----YTMAVTEKCDVYSFGVVALEVLMGSHPTD 714
+ K D++S G+ +E+ + P D
Sbjct: 182 NPELNQKGYSVKSDIWSLGITMIELAILRFPYD 214
>pdb|3RFS|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
pdb|3RFS|B Chain B, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 272
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 65/158 (41%), Gaps = 4/158 (2%)
Query: 120 LRLQGNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEV-GNLKNLKSLFLDNNHLSGP 178
L L GNKL + S++ LTNLTYL L+ NQL LP V L NLK L L N L
Sbjct: 68 LALGGNKLHDI--SALKELTNLTYLILTGNQLQS-LPNGVFDKLTNLKELVLVENQLQSL 124
Query: 179 IPSTLYHLNQLATLCLGYNKLVGPVTKEVGNMKNLDRLHLNGNNLTGSIPSTIGYLNLLD 238
L L L L +N+L + NL L L+ N L L L
Sbjct: 125 PDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLK 184
Query: 239 ELHLSHNRLDGPIPPTIGNLTNLIALDLSSNQLSGLLP 276
+L L N+L LT+L + L N P
Sbjct: 185 DLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 222
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 43/90 (47%), Gaps = 2/90 (2%)
Query: 111 FGNLKDLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEV-GNLKNLKSLF 169
F L +L +L L N+L L LTNLTYL+L+ NQL LP+ V L NL L
Sbjct: 105 FDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQS-LPKGVFDKLTNLTELD 163
Query: 170 LDNNHLSGPIPSTLYHLNQLATLCLGYNKL 199
L N L L QL L L N+L
Sbjct: 164 LSYNQLQSLPEGVFDKLTQLKDLRLYQNQL 193
Score = 33.5 bits (75), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 51/140 (36%), Gaps = 2/140 (1%)
Query: 114 LKDLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEV-GNLKNLKSLFLDN 172
L +L L L GN+L L LTNL L L NQL LP V L NL L L +
Sbjct: 84 LTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQS-LPDGVFDKLTNLTYLNLAH 142
Query: 173 NHLSGPIPSTLYHLNQLATLCLGYNKLVGPVTKEVGNMKNLDRLHLNGNNLTGSIPSTIG 232
N L L L L L YN+L + L L L N L
Sbjct: 143 NQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFD 202
Query: 233 YLNLLDELHLSHNRLDGPIP 252
L L + L N D P
Sbjct: 203 RLTSLQYIWLHDNPWDCTCP 222
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 92/220 (41%), Gaps = 36/220 (16%)
Query: 509 DFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEP--------------AFLESF 554
D+ I + G + + + K ALKK +S E+ + + F
Sbjct: 32 DYRIIRTLNQGKFNKIILCE-KDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDF 90
Query: 555 QTEARLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSL-------FCVLRNDVEAVEL 607
+ E ++++ I++ + G + +++IYEYME S+ F + +N + +
Sbjct: 91 KNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPI 150
Query: 608 DWTKRVNIVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDS 667
K I+KS+ ++ SY+H + +I HRD ++DFG + +
Sbjct: 151 QVIK--CIIKSVLNSFSYIHNE--KNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKK 206
Query: 668 SNRTLVVGTYGYIAPEL-----AYTMAVTEKCDVYSFGVV 702
+ GTY ++ PE +Y A K D++S G+
Sbjct: 207 IKGSR--GTYEFMPPEFFSNESSYNGA---KVDIWSLGIC 241
>pdb|2O6S|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B59
pdb|2O6S|B Chain B, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B59
Length = 208
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 56/126 (44%), Gaps = 3/126 (2%)
Query: 111 FGNLKDLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEV-GNLKNLKSLF 169
F L L QL L GNKL L LT+LTYL+LS NQL LP V L LK L
Sbjct: 48 FDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQS-LPNGVFDKLTQLKELA 106
Query: 170 LDNNHLSGPIPSTLYHLNQLATLCLGYNKLVGPVTKEVGNMKNLDRLHLNGNNLTGSIPS 229
L+ N L L QL L L N+L + +L + L+ N + P
Sbjct: 107 LNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCPG 166
Query: 230 TIGYLN 235
I YL+
Sbjct: 167 -IRYLS 171
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 64/158 (40%), Gaps = 10/158 (6%)
Query: 131 IPSSIGNLTNLTYLDLSLNQLSGRLPQEV-GNLKNLKSLFLDNNHLSGPIPSTLYH-LNQ 188
+P+ I T TYLDL N L LP V L +L L+L N L +P+ +++ L
Sbjct: 22 VPTGIPAQT--TYLDLETNSLKS-LPNGVFDELTSLTQLYLGGNKLQS-LPNGVFNKLTS 77
Query: 189 LATLCLGYNKLVGPVTKEVGNMKNLDRLHLNGNNLTGSIPSTIGYLNLLDELHLSHNRLD 248
L L L N+L + L L LN N L L L +L L N+L
Sbjct: 78 LTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLK 137
Query: 249 GPIPPTIGNLTNLIALDLSSNQLSGLLPREVGNLKYLA 286
LT+L + L N P ++YL+
Sbjct: 138 SVPDGVFDRLTSLQYIWLHDNPWDCTCP----GIRYLS 171
>pdb|3ZYO|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats
And Immunoglobulin Domain Of Netrin-G Ligand-3
Length = 411
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 93/189 (49%), Gaps = 5/189 (2%)
Query: 111 FGNLKDLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNLKSLFL 170
F +L+ L+ L+L N + + + L +L L+L N+L+ Q L L+ L+L
Sbjct: 55 FKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWL 114
Query: 171 DNNHLSGPIPSTLYH-LNQLATLCLGYNKLVGPVTKEV-GNMKNLDRLHLNGNNLTGSIP 228
NN + IPS ++ + L L LG K + +++ + NL L+L NL IP
Sbjct: 115 RNNPIES-IPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNL-KDIP 172
Query: 229 STIGYLNLLDELHLSHNRLDGPIPPTIGNLTNLIALDLSSNQLSGLLPREVGNLKYLASL 288
+ + L +EL LS NRLD P + LT+L L L Q++ + +LK L L
Sbjct: 173 NLTALVRL-EELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEEL 231
Query: 289 SLNGNILIG 297
+L+ N L+
Sbjct: 232 NLSHNNLMS 240
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 93/209 (44%), Gaps = 11/209 (5%)
Query: 42 LSKLEKLVLSHNSLTGRIPSEIGA---LSRLKVLDLSYNRLTGTIPSEXXXXXXXXXXXX 98
L LE L LS N L +I E+GA L L L+L NRLT T+P++
Sbjct: 58 LRHLEILQLSKN-LVRKI--EVGAFNGLPSLNTLELFDNRLT-TVPTQAFEYLSKLRELW 113
Query: 99 XXXXXXXXXP-LEFGNLKDLDQLRL-QGNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLP 156
P F + L +L L + +L+ + ++ L NL YL+L + L +P
Sbjct: 114 LRNNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNLKD-IP 172
Query: 157 QEVGNLKNLKSLFLDNNHLSGPIPSTLYHLNQLATLCLGYNKLVGPVTKEVGNMKNLDRL 216
+ L L+ L L N L P + L L L L + ++ ++K+L+ L
Sbjct: 173 N-LTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEEL 231
Query: 217 HLNGNNLTGSIPSTIGYLNLLDELHLSHN 245
+L+ NNL L+ L+ +HL+HN
Sbjct: 232 NLSHNNLMSLPHDLFTPLHRLERVHLNHN 260
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 83/213 (38%), Gaps = 24/213 (11%)
Query: 510 FHIKYC-----IGTGGYGSVY-----RAQLSSGKLVALKKLHRSETEEPAFLESFQTEAR 559
FH +Y +G G +G V +G++VA+K L P ++ E
Sbjct: 28 FHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAG--PQHRSGWKQEID 85
Query: 560 LLSQIRHRNIVKLYGFC--LHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVK 617
+L + H +I+K G C + L+ EY+ GSL R+ + + + + +
Sbjct: 86 ILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSL----RDYLPRHSIGLAQLLLFAQ 141
Query: 618 SMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLL---HPDSSNRTLVV 674
+ ++YLH +HRD + DFGLA+ + H R
Sbjct: 142 QICEGMAYLH---AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGD 198
Query: 675 GTYGYIAPELAYTMAVTEKCDVYSFGVVALEVL 707
+ APE DV+SFGV E+L
Sbjct: 199 SPVFWYAPECLKEYKFYYASDVWSFGVTLYELL 231
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 79/206 (38%), Gaps = 20/206 (9%)
Query: 516 IGTGGYGSVYRAQL------SSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNI 569
+G G +G VY + VA+K ++ S + F EA ++ ++
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI--EFLNEASVMKGFTCHHV 83
Query: 570 VKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELD-------WTKRVNIVKSMAHA 622
V+L G + ++ E M G L LR+ E + + + + +A
Sbjct: 84 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 143
Query: 623 LSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVG--TYGYI 680
++YL+ VHR+ + DFG+ R ++ R G ++
Sbjct: 144 MAYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 200
Query: 681 APELAYTMAVTEKCDVYSFGVVALEV 706
APE T D++SFGVV E+
Sbjct: 201 APESLKDGVFTTSSDMWSFGVVLWEI 226
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 79/206 (38%), Gaps = 20/206 (9%)
Query: 516 IGTGGYGSVYRAQL------SSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNI 569
+G G +G VY + VA+K ++ S + F EA ++ ++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI--EFLNEASVMKGFTCHHV 82
Query: 570 VKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELD-------WTKRVNIVKSMAHA 622
V+L G + ++ E M G L LR+ E + + + + +A
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 623 LSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVG--TYGYI 680
++YL+ VHR+ + DFG+ R ++ R G ++
Sbjct: 143 MAYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 199
Query: 681 APELAYTMAVTEKCDVYSFGVVALEV 706
APE T D++SFGVV E+
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 84/213 (39%), Gaps = 24/213 (11%)
Query: 510 FHIKYC-----IGTGGYGSVY-----RAQLSSGKLVALKKLHRSETEEPAFLESFQTEAR 559
FH +Y +G G +G V +G++VA+K L P ++ E
Sbjct: 11 FHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCG--PQHRSGWKQEID 68
Query: 560 LLSQIRHRNIVKLYGFCLHN--KCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVK 617
+L + H +I+K G C K + L+ EY+ GSL R+ + + + + +
Sbjct: 69 ILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSL----RDYLPRHSIGLAQLLLFAQ 124
Query: 618 SMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLL---HPDSSNRTLVV 674
+ ++YLH +HR+ + DFGLA+ + H R
Sbjct: 125 QICEGMAYLH---SQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGD 181
Query: 675 GTYGYIAPELAYTMAVTEKCDVYSFGVVALEVL 707
+ APE DV+SFGV E+L
Sbjct: 182 SPVFWYAPECLKEYKFYYASDVWSFGVTLYELL 214
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 84/213 (39%), Gaps = 24/213 (11%)
Query: 510 FHIKYC-----IGTGGYGSVYRAQLS-----SGKLVALKKLHRSETEEPAFLESFQTEAR 559
FH +Y +G G +G V +G++VA+K L P ++ E
Sbjct: 11 FHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCG--PQHRSGWKQEID 68
Query: 560 LLSQIRHRNIVKLYGFCLHN--KCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVK 617
+L + H +I+K G C K + L+ EY+ GSL R+ + + + + +
Sbjct: 69 ILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSL----RDYLPRHSIGLAQLLLFAQ 124
Query: 618 SMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLL---HPDSSNRTLVV 674
+ ++YLH +HR+ + DFGLA+ + H R
Sbjct: 125 QICEGMAYLH---AQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGD 181
Query: 675 GTYGYIAPELAYTMAVTEKCDVYSFGVVALEVL 707
+ APE DV+SFGV E+L
Sbjct: 182 SPVFWYAPECLKEYKFYYASDVWSFGVTLYELL 214
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 105/238 (44%), Gaps = 36/238 (15%)
Query: 493 NYDGRITFEEMIEATEDFHIKYCIGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFL 551
++ GR FE++ + ED +G G + V L + + A+K + + +P +
Sbjct: 5 SFSGR--FEDVYQLQEDV-----LGEGAHARVQTCINLITSQEYAVKIIEK----QPGHI 53
Query: 552 ES-FQTEARLLSQIR-HRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDW 609
S E +L Q + HRN+++L F +L++E M GS+ + EL+
Sbjct: 54 RSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEA 113
Query: 610 TKRVNIVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAF---VADFGLARLLH-- 664
+ +V+ +A AL +LH I HRD + + DFGL +
Sbjct: 114 SV---VVQDVASALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLN 167
Query: 665 ----PDSSNRTLV-VGTYGYIAPELAYTMA-----VTEKCDVYSFGVVALEVLMGSHP 712
P S+ L G+ Y+APE+ + ++CD++S GV+ L +L+ +P
Sbjct: 168 GDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVI-LYILLSGYP 224
>pdb|3KJ4|A Chain A, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
pdb|3KJ4|D Chain D, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
Length = 286
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 72/178 (40%), Gaps = 1/178 (0%)
Query: 45 LEKLVLSHNSLTGRIPSEIGALSRLKVLDLSYN-RLTGTIPSEXXXXXXXXXXXXXXXXX 103
L L L N+L G + L+ L+ LDLS N +L P+
Sbjct: 57 LTILWLHSNALAGIDAAAFTGLTLLEQLDLSDNAQLRVVDPTTFRGLGHLHTLHLDRCGL 116
Query: 104 XXXXPLEFGNLKDLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLK 163
P F L L L LQ N L L ++ +L NLT+L L N++ L
Sbjct: 117 QELGPGLFRGLAALQYLYLQDNNLQALPDNTFRDLGNLTHLFLHGNRIPSVPEHAFRGLH 176
Query: 164 NLKSLFLDNNHLSGPIPSTLYHLNQLATLCLGYNKLVGPVTKEVGNMKNLDRLHLNGN 221
+L L L NH++ P L +L TL L N L + + +++L L LN N
Sbjct: 177 SLDRLLLHQNHVARVHPHAFRDLGRLMTLYLFANNLSMLPAEVLVPLRSLQYLRLNDN 234
Score = 36.6 bits (83), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 73/178 (41%), Gaps = 11/178 (6%)
Query: 122 LQGNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNLKSLFL-DNNHLSGPIP 180
L GN++ + +S + NLT L L N L+G L L+ L L DN L P
Sbjct: 38 LHGNRISYVPAASFQSCRNLTILWLHSNALAGIDAAAFTGLTLLEQLDLSDNAQLRVVDP 97
Query: 181 STLYHLNQLATLCLGYNKLVGPVTKEVG-----NMKNLDRLHLNGNNLTGSIPSTIGYLN 235
+T L L TL L L +E+G + L L+L NNL +T L
Sbjct: 98 TTFRGLGHLHTLHLDRCGL-----QELGPGLFRGLAALQYLYLQDNNLQALPDNTFRDLG 152
Query: 236 LLDELHLSHNRLDGPIPPTIGNLTNLIALDLSSNQLSGLLPREVGNLKYLASLSLNGN 293
L L L NR+ L +L L L N ++ + P +L L +L L N
Sbjct: 153 NLTHLFLHGNRIPSVPEHAFRGLHSLDRLLLHQNHVARVHPHAFRDLGRLMTLYLFAN 210
Score = 32.7 bits (73), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 66/163 (40%), Gaps = 25/163 (15%)
Query: 110 EFGNLKDLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLSLN-QLSGRLP------------ 156
F + ++L L L N L G+ ++ LT L LDLS N QL P
Sbjct: 50 SFQSCRNLTILWLHSNALAGIDAAAFTGLTLLEQLDLSDNAQLRVVDPTTFRGLGHLHTL 109
Query: 157 -------QEVG-----NLKNLKSLFLDNNHLSGPIPSTLYHLNQLATLCLGYNKLVGPVT 204
QE+G L L+ L+L +N+L +T L L L L N++
Sbjct: 110 HLDRCGLQELGPGLFRGLAALQYLYLQDNNLQALPDNTFRDLGNLTHLFLHGNRIPSVPE 169
Query: 205 KEVGNMKNLDRLHLNGNNLTGSIPSTIGYLNLLDELHLSHNRL 247
+ +LDRL L+ N++ P L L L+L N L
Sbjct: 170 HAFRGLHSLDRLLLHQNHVARVHPHAFRDLGRLMTLYLFANNL 212
>pdb|3B2D|A Chain A, Crystal Structure Of Human Rp105MD-1 Complex
pdb|3B2D|B Chain B, Crystal Structure Of Human Rp105MD-1 Complex
Length = 603
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 128/323 (39%), Gaps = 65/323 (20%)
Query: 8 AELSQLNFTCFPNLVTFRIWGTLLSGRMPSEIGALSKLEKLVLSHNSL-------TGRIP 60
+++S F CF L + T L G +PS + L+ L+KLVLS N P
Sbjct: 264 SDISSTTFQCFTQLQELDLTATHLKG-LPSGMKGLNLLKKLVLSVNHFDQLCQISAANFP 322
Query: 61 S---------------EIGALSRL---KVLDLSYNRLTGTIPSEXXXXXXXXXXXXXXXX 102
S +G L +L + LDLS+N + +
Sbjct: 323 SLTHLYIRGNVKKLHLGVGCLEKLGNLQTLDLSHNDIEAS-------------------- 362
Query: 103 XXXXXPLEFGNLKDLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQE-VGN 161
L+ NL L L L N+ GL + L LDL+ +L PQ N
Sbjct: 363 --DCCSLQLKNLSHLQTLNLSHNEPLGLQSQAFKECPQLELLDLAFTRLHINAPQSPFQN 420
Query: 162 LK-----NLKSLFLD--NNHLSGPIPSTLYHLNQLATLCLGYNKLVGPVTKE--VGNMKN 212
L NL FLD N HL +P L HLN G + G +TK + + +
Sbjct: 421 LHFLQVLNLTYCFLDTSNQHLLAGLP-VLRHLN-----LKGNHFQDGTITKTNLLQTVGS 474
Query: 213 LDRLHLNGNNLTGSIPSTIGYLNLLDELHLSHNRLDGPIPPTIGNLTNLIALDLSSNQLS 272
L+ L L+ L L + + LSHN L ++ +L I L+L++N ++
Sbjct: 475 LEVLILSSCGLLSIDQQAFHSLGKMSHVDLSHNSLTCDSIDSLSHLKG-IYLNLAANSIN 533
Query: 273 GLLPREVGNLKYLASLSLNGNIL 295
+ PR + L ++++L+ N L
Sbjct: 534 IISPRLLPILSQQSTINLSHNPL 556
Score = 29.3 bits (64), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 59/120 (49%), Gaps = 8/120 (6%)
Query: 111 FGNLKDLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNLKSLFL 170
F + L L L GN L + +S+ +L +L L +S V NL+NL+SL+L
Sbjct: 74 FQSHHQLSTLVLTGNPLIFMAETSLNGPKSLKHLFLIQTGISNLEFIPVHNLENLESLYL 133
Query: 171 DNNHLSGPIPSTLYHLNQLATLCLGYNKLVGPVTKEVGNMKNLDR-----LHLNGNNLTG 225
+NH+S + L L N + +++E +M++L++ L+ NGNN+ G
Sbjct: 134 GSNHISSIKFPKDFPARNLKVLDF-QNNAIHYISRE--DMRSLEQAINLSLNFNGNNVKG 190
>pdb|3E6J|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor (Vlr)
Rbc36 In Complex With H-Trisaccharide
Length = 229
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 55/115 (47%), Gaps = 3/115 (2%)
Query: 108 PLEFGNLKDLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEV-GNLKNLK 166
P F +L +L +L L N+L L +LT LT LDL NQL+ LP V L +LK
Sbjct: 57 PGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLT-VLPSAVFDRLVHLK 115
Query: 167 SLFLDNNHLSGPIPSTLYHLNQLATLCLGYNKLVGPVTKEVGNMKNLDRLHLNGN 221
LF+ N L+ +P + L L L L N+L + +L +L GN
Sbjct: 116 ELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGN 169
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 59/124 (47%), Gaps = 5/124 (4%)
Query: 125 NKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNLKSLFLDNNHLSGPIPSTLY 184
+K +P+ I TN L L NQ++ P +L NLK L+L +N L G +P ++
Sbjct: 28 SKRHASVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQL-GALPVGVF 84
Query: 185 H-LNQLATLCLGYNKLVGPVTKEVGNMKNLDRLHLNGNNLTGSIPSTIGYLNLLDELHLS 243
L QL L LG N+L + + +L L + N LT +P I L L L L
Sbjct: 85 DSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALD 143
Query: 244 HNRL 247
N+L
Sbjct: 144 QNQL 147
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 64/156 (41%), Gaps = 27/156 (17%)
Query: 36 PSEIGALSKLEKLVLSHNSLTGRIPSEI-GALSRLKVLDLSYNRLTGTIPSEXXXXXXXX 94
P +L L++L L N L G +P + +L++L VLDL N+LT +PS
Sbjct: 57 PGVFDSLINLKELYLGSNQL-GALPVGVFDSLTQLTVLDLGTNQLT-VLPSAV------- 107
Query: 95 XXXXXXXXXXXXXPLEFGNLKDLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLSLNQLSGR 154
F L L +L + NKL L P I LT+LT+L L NQL
Sbjct: 108 ----------------FDRLVHLKELFMCCNKLTEL-PRGIERLTHLTHLALDQNQLKSI 150
Query: 155 LPQEVGNLKNLKSLFLDNNHLSGPIPSTLYHLNQLA 190
L +L +L N +Y N +A
Sbjct: 151 PHGAFDRLSSLTHAYLFGNPWDCECRDIMYLRNWVA 186
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 48/108 (44%), Gaps = 25/108 (23%)
Query: 212 NLDRLHLNGNNLTGSIPSTIGYLNLLDELHLSHNRLDGPIPPTI-GNLTNLIALDLSSNQ 270
N L+L+ N +T P L L EL+L N+L G +P + +LT L LDL +NQ
Sbjct: 41 NAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQL-GALPVGVFDSLTQLTVLDLGTNQ 99
Query: 271 LSGL-----------------------LPREVGNLKYLASLSLNGNIL 295
L+ L LPR + L +L L+L+ N L
Sbjct: 100 LTVLPSAVFDRLVHLKELFMCCNKLTELPRGIERLTHLTHLALDQNQL 147
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 93/232 (40%), Gaps = 42/232 (18%)
Query: 510 FHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRN 568
+ I++ IGTG YG V A ++VA+KK+ R E+ + E +L+++ H +
Sbjct: 55 YEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRV-FEDLIDCKRILREIAILNRLNHDH 113
Query: 569 IVKLYGFCLHNKC-----MFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHAL 623
+VK+ + ++++ E + + R V EL ++ ++ +
Sbjct: 114 VVKVLDIVIPKDVEKFDELYVVLEIAD-SDFKKLFRTPVYLTELHIK---TLLYNLLVGV 169
Query: 624 SYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLL-HPDSSNRTLVVG------- 675
Y+H I+HRD V DFGLAR + +P++ N L +
Sbjct: 170 KYVH---SAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMN 226
Query: 676 -------------------TYGYIAPELAYTMA-VTEKCDVYSFGVVALEVL 707
T Y APEL TE DV+S G + E+L
Sbjct: 227 LVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELL 278
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 84/211 (39%), Gaps = 17/211 (8%)
Query: 509 DFHIKYCIGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHR 567
DF + IG GG+G VY + +GK+ A+K L + + E +LS +
Sbjct: 189 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG 248
Query: 568 N----IVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWT-KRVNIVKSMAHA 622
+ + Y F +K F++ + M G L L E D I+ + H
Sbjct: 249 DCPFIVCMSYAFHTPDKLSFIL-DLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHM 307
Query: 623 LSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAP 682
+ +V+RD ++D GLA + + VGT+GY+AP
Sbjct: 308 HNRF-------VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS--VGTHGYMAP 358
Query: 683 E-LAYTMAVTEKCDVYSFGVVALEVLMGSHP 712
E L +A D +S G + ++L G P
Sbjct: 359 EVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 389
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 90/228 (39%), Gaps = 13/228 (5%)
Query: 487 NEFSIWNYDGRITFEEMIEATEDFHIKYCIGTGGYGSVYRAQL-SSGKLVALKKLHRSET 545
N F W + E F +G GG+G V Q+ ++GK+ A KKL +
Sbjct: 168 NRFLQWKW-----LERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRI 222
Query: 546 EEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAV 605
++ E ++L ++ R +V L + L+ M G L + + +A
Sbjct: 223 KKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAG 282
Query: 606 ELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLH- 664
+ V + L LH + IV+RD ++D GLA +H
Sbjct: 283 -FPEARAVFYAAEICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLA--VHV 336
Query: 665 PDSSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHP 712
P+ VGT GY+APE+ T D ++ G + E++ G P
Sbjct: 337 PEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 84/211 (39%), Gaps = 17/211 (8%)
Query: 509 DFHIKYCIGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHR 567
DF + IG GG+G VY + +GK+ A+K L + + E +LS +
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG 249
Query: 568 N----IVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWT-KRVNIVKSMAHA 622
+ + Y F +K F++ + M G L L E D I+ + H
Sbjct: 250 DCPFIVCMSYAFHTPDKLSFIL-DLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHM 308
Query: 623 LSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAP 682
+ +V+RD ++D GLA + + VGT+GY+AP
Sbjct: 309 HNRF-------VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS--VGTHGYMAP 359
Query: 683 E-LAYTMAVTEKCDVYSFGVVALEVLMGSHP 712
E L +A D +S G + ++L G P
Sbjct: 360 EVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 93/218 (42%), Gaps = 39/218 (17%)
Query: 516 IGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLY- 573
+G GG G V+ A K VA+KK+ ++ P ++ E +++ ++ H NIVK++
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTD---PQSVKHALREIKIIRRLDHDNIVKVFE 75
Query: 574 -------------GFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMA 620
G ++++ EYME L N +E L + +
Sbjct: 76 ILGPSGSQLTDDVGSLTELNSVYIVQEYMETD-----LANVLEQGPLLEEHARLFMYQLL 130
Query: 621 HALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAF-VADFGLARLLHPDSSNRTLV---VGT 676
L Y+H +++HRD + DFGLAR++ P S++ + + T
Sbjct: 131 RGLKYIH---SANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVT 187
Query: 677 YGYIAPELA-----YTMAVTEKCDVYSFGVVALEVLMG 709
Y +P L YT A+ D+++ G + E+L G
Sbjct: 188 KWYRSPRLLLSPNNYTKAI----DMWAAGCIFAEMLTG 221
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 94/230 (40%), Gaps = 34/230 (14%)
Query: 506 ATEDFHIKYC-------IGTGGYGSVYRAQ-LSSGKLVALKKLHRSETEEPAFLESFQTE 557
A E+F +K +G G YG V + + + SG++ A+K++ + Q +
Sbjct: 25 AXENFEVKADDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNS--------QEQ 76
Query: 558 ARLLSQ--IRHRNI-----VKLYGFCLHNKCMFLIYEYMERG--SLFCVLRNDVEAVELD 608
RLL I R + V YG +++ E + + + + + + D
Sbjct: 77 KRLLXDLDISXRTVDCPFTVTFYGALFREGDVWICXELXDTSLDKFYKQVIDKGQTIPED 136
Query: 609 WTKRVNIVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSS 668
++ + S+ AL +LH K S++HRD + DFG++ L D +
Sbjct: 137 ILGKIAV--SIVKALEHLH--SKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVA 192
Query: 669 NRTLVVGTYGYIAPELA----YTMAVTEKCDVYSFGVVALEVLMGSHPTD 714
+ + G Y APE + K D++S G+ +E+ + P D
Sbjct: 193 -KDIDAGCKPYXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFPYD 241
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 84/211 (39%), Gaps = 17/211 (8%)
Query: 509 DFHIKYCIGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHR 567
DF + IG GG+G VY + +GK+ A+K L + + E +LS +
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG 249
Query: 568 N----IVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWT-KRVNIVKSMAHA 622
+ + Y F +K F++ + M G L L E D I+ + H
Sbjct: 250 DCPFIVCMSYAFHTPDKLSFIL-DLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHM 308
Query: 623 LSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAP 682
+ +V+RD ++D GLA + + VGT+GY+AP
Sbjct: 309 HNRF-------VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS--VGTHGYMAP 359
Query: 683 E-LAYTMAVTEKCDVYSFGVVALEVLMGSHP 712
E L +A D +S G + ++L G P
Sbjct: 360 EVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 84/211 (39%), Gaps = 17/211 (8%)
Query: 509 DFHIKYCIGTGGYGSVYRA-QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHR 567
DF + IG GG+G VY + +GK+ A+K L + + E +LS +
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG 249
Query: 568 N----IVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWT-KRVNIVKSMAHA 622
+ + Y F +K F++ + M G L L E D I+ + H
Sbjct: 250 DCPFIVCMSYAFHTPDKLSFIL-DLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHM 308
Query: 623 LSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLHPDSSNRTLVVGTYGYIAP 682
+ +V+RD ++D GLA + + VGT+GY+AP
Sbjct: 309 HNRF-------VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS--VGTHGYMAP 359
Query: 683 E-LAYTMAVTEKCDVYSFGVVALEVLMGSHP 712
E L +A D +S G + ++L G P
Sbjct: 360 EVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 90/228 (39%), Gaps = 13/228 (5%)
Query: 487 NEFSIWNYDGRITFEEMIEATEDFHIKYCIGTGGYGSVYRAQL-SSGKLVALKKLHRSET 545
N F W + E F +G GG+G V Q+ ++GK+ A KKL +
Sbjct: 168 NRFLQWKW-----LERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRI 222
Query: 546 EEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAV 605
++ E ++L ++ R +V L + L+ M G L + + +A
Sbjct: 223 KKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAG 282
Query: 606 ELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDXXXXXXXXXXXXEAFVADFGLARLLH- 664
+ V + L LH + IV+RD ++D GLA +H
Sbjct: 283 -FPEARAVFYAAEICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLA--VHV 336
Query: 665 PDSSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHP 712
P+ VGT GY+APE+ T D ++ G + E++ G P
Sbjct: 337 PEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/262 (20%), Positives = 101/262 (38%), Gaps = 31/262 (11%)
Query: 516 IGTGGYGSVYRA--QLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRN----- 568
+G G +G V + G+ VA+K + + + E+ ++E ++L + +
Sbjct: 22 LGEGAFGKVVECIDHKAGGRHVAVKIVKNVDR----YCEAARSEIQVLEHLNTTDPNSTF 77
Query: 569 -IVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRV--NIVKSM--AHAL 623
V++ + H+ + +++E + + + N LD +++ I KS+ H+
Sbjct: 78 RCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSN 137
Query: 624 SYLHYDCKPS---IVHRDXXXXXXXXXXXXEAF-------VADFGLARLLHPDSSNRTLV 673
H D KP V D E V DFG A D + + +
Sbjct: 138 KLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATY---DDEHHSTL 194
Query: 674 VGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMG--SHPTDXXXXXXXXXGRKISQNP 731
V T Y APE+ + ++ CDV+S G + +E +G PT R + P
Sbjct: 195 VSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLP 254
Query: 732 RLDLQCNAYLKNFSQGNHRWEN 753
+ +Q K F W+
Sbjct: 255 KHMIQKTRKRKYFHHDRLDWDE 276
>pdb|2WFH|A Chain A, The Human Slit 2 Dimerization Domain D4
pdb|2WFH|B Chain B, The Human Slit 2 Dimerization Domain D4
Length = 193
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Query: 211 KNLDRLHLNGNNLTGSIPSTIGYLNLLDELHLSHNRLDGPIPPTIGNLTNLIALDLSSNQ 270
+++ L+L+GN T +P + L + LS+NR+ + N+T L+ L LS N+
Sbjct: 31 RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89
Query: 271 LSGLLPREVGNLKYLASLSLNGN 293
L + PR LK L LSL+GN
Sbjct: 90 LRCIPPRTFDGLKSLRLLSLHGN 112
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 64/131 (48%), Gaps = 3/131 (2%)
Query: 117 LDQLRLQGNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNLKSLFLDNNHLS 176
LD + NK ++P I ++T L L NQ + +P+E+ N K+L + L NN +S
Sbjct: 11 LDTVVRCSNKGLKVLPKGIPR--DVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRIS 67
Query: 177 GPIPSTLYHLNQLATLCLGYNKLVGPVTKEVGNMKNLDRLHLNGNNLTGSIPSTIGYLNL 236
+ ++ QL TL L YN+L + +K+L L L+GN+++ L+
Sbjct: 68 TLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSA 127
Query: 237 LDELHLSHNRL 247
L L + N L
Sbjct: 128 LSHLAIGANPL 138
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 43/92 (46%)
Query: 108 PLEFGNLKDLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNLKS 167
P E N K L + L N++ L S N+T L L LS N+L P+ LK+L+
Sbjct: 47 PKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRL 106
Query: 168 LFLDNNHLSGPIPSTLYHLNQLATLCLGYNKL 199
L L N +S L+ L+ L +G N L
Sbjct: 107 LSLHGNDISVVPEGAFNDLSALSHLAIGANPL 138
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 44/93 (47%)
Query: 203 VTKEVGNMKNLDRLHLNGNNLTGSIPSTIGYLNLLDELHLSHNRLDGPIPPTIGNLTNLI 262
V KE+ N K+L + L+ N ++ + + L L LS+NRL P T L +L
Sbjct: 46 VPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLR 105
Query: 263 ALDLSSNQLSGLLPREVGNLKYLASLSLNGNIL 295
L L N +S + +L L+ L++ N L
Sbjct: 106 LLSLHGNDISVVPEGAFNDLSALSHLAIGANPL 138
>pdb|1W8A|A Chain A, Third Lrr Domain Of Drosophila Slit
Length = 192
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%)
Query: 111 FGNLKDLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNLKSLFL 170
FG L L +L L+ N+L G+ P++ +++ L L N++ + L LK+L L
Sbjct: 50 FGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNL 109
Query: 171 DNNHLSGPIPSTLYHLNQLATLCLGYN 197
+N +S +P + HLN L +L L N
Sbjct: 110 YDNQISCVMPGSFEHLNSLTSLNLASN 136
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 52/106 (49%), Gaps = 3/106 (2%)
Query: 142 TYLDLSLNQLSGRLPQE--VGNLKNLKSLFLDNNHLSGPIPSTLYHLNQLATLCLGYNKL 199
T L L+ N+L GR+ + G L +L L L N L+G P+ + + L LG NK+
Sbjct: 32 TELLLNDNEL-GRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKI 90
Query: 200 VGPVTKEVGNMKNLDRLHLNGNNLTGSIPSTIGYLNLLDELHLSHN 245
K + L L+L N ++ +P + +LN L L+L+ N
Sbjct: 91 KEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASN 136
Score = 30.0 bits (66), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 55/129 (42%), Gaps = 27/129 (20%)
Query: 47 KLVLSHNSLTGRIPSE--IGALSRLKVLDLSYNRLTGTIPSEXXXXXXXXXXXXXXXXXX 104
+L+L+ N L GRI S+ G L L L+L N+LTG P+
Sbjct: 33 ELLLNDNEL-GRISSDGLFGRLPHLVKLELKRNQLTGIEPNA------------------ 73
Query: 105 XXXPLEFGNLKDLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKN 164
F + +L+L NK+ + L L L+L NQ+S +P +L +
Sbjct: 74 ------FEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNS 127
Query: 165 LKSLFLDNN 173
L SL L +N
Sbjct: 128 LTSLNLASN 136
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.138 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,860,044
Number of Sequences: 62578
Number of extensions: 761902
Number of successful extensions: 4814
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 524
Number of HSP's successfully gapped in prelim test: 581
Number of HSP's that attempted gapping in prelim test: 2071
Number of HSP's gapped (non-prelim): 1632
length of query: 764
length of database: 14,973,337
effective HSP length: 106
effective length of query: 658
effective length of database: 8,340,069
effective search space: 5487765402
effective search space used: 5487765402
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)