Query 004268
Match_columns 764
No_of_seqs 850 out of 5941
Neff 10.0
Searched_HMMs 29240
Date Mon Mar 25 19:43:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004268.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004268hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 100.0 7.4E-51 2.5E-55 476.7 32.3 398 17-414 267-741 (768)
2 4aw0_A HPDK1, 3-phosphoinositi 100.0 3E-51 1E-55 416.8 16.9 235 508-748 32-272 (311)
3 3rgz_A Protein brassinosteroid 100.0 1E-49 3.6E-54 466.9 29.8 399 15-415 219-719 (768)
4 4b9d_A Serine/threonine-protei 100.0 3.7E-50 1.3E-54 415.8 17.4 237 507-748 23-264 (350)
5 4fih_A Serine/threonine-protei 100.0 1.7E-49 5.8E-54 410.2 19.9 231 508-748 74-311 (346)
6 3j0a_A TOLL-like receptor 5; m 100.0 8.7E-48 3E-52 455.3 35.3 408 6-416 12-563 (844)
7 3t6q_A CD180 antigen; protein- 100.0 2.4E-47 8.3E-52 437.2 36.8 400 12-412 50-535 (606)
8 3t6q_A CD180 antigen; protein- 100.0 1.8E-47 6.3E-52 438.2 34.3 404 10-415 72-562 (606)
9 3hyh_A Carbon catabolite-derep 100.0 5.3E-49 1.8E-53 395.1 18.6 234 507-748 12-250 (275)
10 4fie_A Serine/threonine-protei 100.0 1.9E-48 6.4E-53 412.4 22.9 232 507-748 150-388 (423)
11 3vq2_A TLR4, TOLL-like recepto 100.0 3E-47 1E-51 436.4 32.0 409 6-415 19-560 (606)
12 3ubd_A Ribosomal protein S6 ki 100.0 2.1E-49 7.1E-54 403.6 11.4 238 508-752 24-268 (304)
13 4g3f_A NF-kappa-beta-inducing 100.0 9.6E-48 3.3E-52 396.1 19.6 231 507-751 57-300 (336)
14 3fpq_A Serine/threonine-protei 100.0 4.8E-47 1.6E-51 384.5 23.3 230 510-749 28-271 (290)
15 1ziw_A TOLL-like receptor 3; i 100.0 1.6E-45 5.5E-50 427.8 37.1 196 221-416 391-625 (680)
16 1ziw_A TOLL-like receptor 3; i 100.0 2.6E-45 8.8E-50 426.1 37.8 404 10-413 40-573 (680)
17 4asz_A BDNF/NT-3 growth factor 100.0 3.2E-47 1.1E-51 389.0 18.5 238 507-750 12-272 (299)
18 4eco_A Uncharacterized protein 100.0 1.5E-46 5.3E-51 429.9 26.1 392 19-417 81-604 (636)
19 3vq2_A TLR4, TOLL-like recepto 100.0 7E-46 2.4E-50 425.1 29.1 386 10-397 47-563 (606)
20 4gt4_A Tyrosine-protein kinase 100.0 9.8E-47 3.3E-51 387.1 19.2 241 507-752 25-291 (308)
21 4aoj_A High affinity nerve gro 100.0 2.1E-46 7.1E-51 388.5 20.2 238 507-750 40-302 (329)
22 2z63_A TOLL-like receptor 4, v 100.0 2E-45 6.7E-50 418.5 29.9 395 18-415 27-533 (570)
23 3omv_A RAF proto-oncogene seri 100.0 3.8E-46 1.3E-50 380.7 20.8 235 507-750 35-283 (307)
24 3j0a_A TOLL-like receptor 5; m 100.0 7.6E-45 2.6E-49 430.2 32.2 382 11-397 40-565 (844)
25 2z63_A TOLL-like receptor 4, v 100.0 7.2E-45 2.5E-49 413.8 28.2 385 10-397 43-536 (570)
26 4g31_A Eukaryotic translation 100.0 9E-46 3.1E-50 379.2 16.6 234 507-748 4-267 (299)
27 4ecn_A Leucine-rich repeat pro 100.0 1.1E-44 3.8E-49 420.4 27.7 388 19-413 323-840 (876)
28 4eco_A Uncharacterized protein 100.0 6.5E-45 2.2E-49 416.4 24.7 358 30-397 194-605 (636)
29 3v47_A TOLL-like receptor 5B a 100.0 5.4E-44 1.8E-48 394.6 30.2 373 21-397 12-413 (455)
30 4ase_A Vascular endothelial gr 100.0 4.1E-45 1.4E-49 381.8 16.9 247 501-752 57-332 (353)
31 2z81_A CD282 antigen, TOLL-lik 100.0 3.6E-44 1.2E-48 405.9 25.3 387 18-414 25-511 (549)
32 3v5w_A G-protein coupled recep 100.0 8.1E-45 2.8E-49 401.3 17.5 235 507-749 188-433 (689)
33 4ecn_A Leucine-rich repeat pro 100.0 1.6E-43 5.4E-48 410.7 26.3 368 35-412 440-863 (876)
34 2z7x_B TOLL-like receptor 1, v 100.0 4.6E-43 1.6E-47 393.8 26.8 378 7-396 9-485 (520)
35 4b99_A Mitogen-activated prote 100.0 5.9E-44 2E-48 379.8 18.3 234 507-748 53-332 (398)
36 3v47_A TOLL-like receptor 5B a 100.0 1.1E-42 3.6E-47 384.2 27.1 354 19-372 30-412 (455)
37 2z81_A CD282 antigen, TOLL-lik 100.0 3.4E-43 1.1E-47 398.0 23.1 376 11-396 42-514 (549)
38 4f9c_A Cell division cycle 7-r 100.0 3.5E-43 1.2E-47 370.0 21.2 197 505-715 18-249 (361)
39 2z7x_B TOLL-like receptor 1, v 100.0 2.2E-42 7.4E-47 388.3 26.5 378 22-414 3-482 (520)
40 3hmm_A TGF-beta receptor type- 100.0 2.5E-43 8.4E-48 363.3 17.3 201 507-716 2-221 (303)
41 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 4.4E-42 1.5E-46 389.0 28.6 361 22-396 34-514 (562)
42 4g8a_A TOLL-like receptor 4; l 100.0 1.7E-41 5.7E-46 391.5 33.3 396 20-416 53-583 (635)
43 3uto_A Twitchin; kinase, muscl 100.0 3.8E-42 1.3E-46 384.5 22.5 233 507-748 156-398 (573)
44 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 4.9E-41 1.7E-45 380.4 31.0 361 41-415 29-512 (562)
45 1o6v_A Internalin A; bacterial 100.0 1.7E-40 5.8E-45 366.8 29.2 348 16-394 43-390 (466)
46 4g8a_A TOLL-like receptor 4; l 100.0 3.5E-40 1.2E-44 380.5 32.3 387 9-396 66-584 (635)
47 2id5_A Lingo-1, leucine rich r 100.0 2E-40 6.8E-45 368.0 28.7 354 22-403 14-367 (477)
48 2id5_A Lingo-1, leucine rich r 100.0 1.9E-40 6.4E-45 368.2 26.5 304 17-320 30-333 (477)
49 1o6l_A RAC-beta serine/threoni 100.0 2E-40 6.9E-45 347.9 19.8 238 507-750 4-245 (337)
50 4dc2_A Protein kinase C IOTA t 100.0 3.1E-40 1.1E-44 352.6 20.6 240 507-752 51-304 (396)
51 3txo_A PKC-L, NPKC-ETA, protei 100.0 1.9E-40 6.5E-45 350.5 16.7 241 506-752 21-266 (353)
52 3a8x_A Protein kinase C IOTA t 100.0 1.1E-39 3.8E-44 344.0 22.0 240 507-752 8-261 (345)
53 3fxz_A Serine/threonine-protei 100.0 1.7E-39 5.7E-44 336.3 22.4 232 507-748 19-257 (297)
54 3fe3_A MAP/microtubule affinit 100.0 1.4E-39 4.7E-44 340.7 21.0 235 506-748 13-252 (328)
55 4aw2_A Serine/threonine-protei 100.0 2.9E-40 9.9E-45 357.6 15.0 242 502-748 68-324 (437)
56 1xjd_A Protein kinase C, theta 100.0 8E-40 2.7E-44 344.3 17.9 239 506-750 15-258 (345)
57 1o6v_A Internalin A; bacterial 100.0 1.9E-38 6.5E-43 350.3 29.6 328 14-370 63-390 (466)
58 3zgw_A Maternal embryonic leuc 100.0 1.1E-39 3.8E-44 343.1 17.9 235 506-748 8-248 (347)
59 2i0e_A Protein kinase C-beta I 100.0 6.7E-40 2.3E-44 346.0 16.1 238 506-749 18-260 (353)
60 1fot_A TPK1 delta, CAMP-depend 100.0 2E-39 6.8E-44 338.0 18.8 233 507-748 5-241 (318)
61 3p86_A Serine/threonine-protei 100.0 4.9E-39 1.7E-43 334.4 21.4 241 506-751 35-282 (309)
62 3bz5_A Internalin-J, INLJ; leu 100.0 3E-38 1E-42 345.6 28.2 344 11-397 34-392 (457)
63 3v8s_A RHO-associated protein 100.0 5.8E-40 2E-44 352.5 14.1 237 505-748 66-315 (410)
64 4eqm_A Protein kinase; transfe 100.0 5E-39 1.7E-43 332.3 20.2 237 507-749 10-256 (294)
65 2r5t_A Serine/threonine-protei 100.0 2.4E-39 8.2E-44 344.2 17.9 237 507-749 37-278 (373)
66 4fr4_A YANK1, serine/threonine 100.0 3.8E-39 1.3E-43 343.1 19.3 237 507-750 14-260 (384)
67 1rdq_E PKA C-alpha, CAMP-depen 100.0 3E-39 1E-43 341.2 17.6 234 507-749 40-277 (350)
68 3o6n_A APL1; leucine-rich repe 100.0 2.3E-38 8E-43 341.6 24.9 332 42-415 44-376 (390)
69 2vd5_A DMPK protein; serine/th 100.0 8.9E-40 3E-44 351.3 13.7 239 503-746 56-311 (412)
70 3soa_A Calcium/calmodulin-depe 100.0 1.5E-38 5.3E-43 345.5 23.6 237 505-748 8-255 (444)
71 2yab_A Death-associated protei 100.0 8.4E-39 2.9E-43 338.7 20.7 236 506-748 10-260 (361)
72 3h4j_B AMPK kdaid, SNF1-like p 100.0 4.2E-39 1.4E-43 337.4 17.6 234 507-748 8-246 (336)
73 3a62_A Ribosomal protein S6 ki 100.0 9.1E-39 3.1E-43 335.4 20.0 240 507-752 16-263 (327)
74 3niz_A Rhodanese family protei 100.0 1.9E-38 6.6E-43 330.6 21.8 206 506-718 19-225 (311)
75 2c30_A Serine/threonine-protei 100.0 2.5E-38 8.4E-43 331.2 22.2 244 495-748 22-282 (321)
76 3c4z_A Rhodopsin kinase; Ser/T 100.0 1.2E-38 4.3E-43 351.9 19.0 242 507-751 184-434 (543)
77 2bdw_A Hypothetical protein K1 100.0 4.1E-38 1.4E-42 334.6 22.2 236 505-748 26-272 (362)
78 1tki_A Titin; serine kinase, m 100.0 2.8E-38 9.5E-43 330.4 20.1 232 507-748 4-245 (321)
79 3bz5_A Internalin-J, INLJ; leu 100.0 2.9E-37 1E-41 337.7 28.0 348 28-415 27-389 (457)
80 2acx_A G protein-coupled recep 100.0 2.3E-38 8E-43 350.2 19.2 241 507-752 183-431 (576)
81 3s95_A LIMK-1, LIM domain kina 100.0 1.4E-37 4.8E-42 324.5 23.8 237 507-751 9-266 (310)
82 3o6n_A APL1; leucine-rich repe 100.0 2.6E-37 8.8E-42 333.4 26.5 311 17-369 43-353 (390)
83 4ejn_A RAC-alpha serine/threon 100.0 7.8E-39 2.7E-43 350.9 14.8 237 507-749 147-388 (446)
84 3c0i_A Peripheral plasma membr 100.0 1.5E-38 5E-43 337.2 16.2 240 506-748 22-274 (351)
85 3tki_A Serine/threonine-protei 100.0 2.9E-38 9.8E-43 330.8 18.1 235 506-748 5-249 (323)
86 2y0a_A Death-associated protei 100.0 6.2E-38 2.1E-42 328.9 20.5 238 506-750 9-261 (326)
87 3o0g_A Cell division protein k 100.0 1.9E-37 6.6E-42 320.5 22.9 236 508-750 2-272 (292)
88 3cok_A Serine/threonine-protei 100.0 8.9E-38 3.1E-42 320.6 20.0 251 506-761 9-265 (278)
89 1ob3_A PFPK5, cell division co 100.0 2.6E-38 8.8E-43 326.2 15.3 235 508-749 2-269 (288)
90 1kob_A Twitchin; kinase, intra 100.0 2.3E-37 7.7E-42 330.7 23.1 234 507-749 50-293 (387)
91 2psq_A Fibroblast growth facto 100.0 1.7E-37 5.8E-42 331.1 21.8 241 507-752 80-349 (370)
92 2zv2_A Calcium/calmodulin-depe 100.0 7.1E-38 2.4E-42 324.8 18.3 236 507-749 12-281 (298)
93 3oja_B Anopheles plasmodium-re 100.0 3.1E-37 1.1E-41 351.0 25.0 331 42-414 50-381 (597)
94 2pmi_A Negative RE, cyclin-dep 100.0 7.1E-38 2.4E-42 327.4 18.1 206 507-718 4-214 (317)
95 3ork_A Serine/threonine protei 100.0 1.8E-38 6E-43 331.3 13.2 236 507-748 11-261 (311)
96 2y94_A 5'-AMP-activated protei 100.0 5.1E-38 1.7E-42 343.5 17.3 235 507-748 15-254 (476)
97 3uc3_A Serine/threonine-protei 100.0 1.3E-37 4.4E-42 330.9 20.0 231 507-748 19-262 (361)
98 2rku_A Serine/threonine-protei 100.0 4.2E-37 1.4E-41 318.4 23.1 236 507-748 14-253 (294)
99 3qd2_B Eukaryotic translation 100.0 8.7E-38 3E-42 329.7 17.6 251 506-761 4-328 (332)
100 3pfq_A PKC-B, PKC-beta, protei 100.0 6.6E-38 2.3E-42 358.4 17.9 238 506-749 339-581 (674)
101 3gni_B Strad alpha; kinase fol 100.0 3.1E-37 1.1E-41 332.5 22.0 207 507-718 24-242 (389)
102 2owb_A Serine/threonine-protei 100.0 2.7E-37 9.1E-42 325.7 20.9 236 507-748 40-279 (335)
103 2w4o_A Calcium/calmodulin-depe 100.0 3.1E-37 1.1E-41 326.5 21.5 232 506-749 51-294 (349)
104 3dls_A PAS domain-containing s 100.0 1.2E-37 4.1E-42 327.7 18.0 235 505-749 21-263 (335)
105 3kul_A Ephrin type-A receptor 100.0 2E-37 7E-42 324.8 19.5 239 507-752 48-298 (325)
106 4fmz_A Internalin; leucine ric 100.0 1.5E-36 5.1E-41 322.2 26.3 307 39-392 40-346 (347)
107 2eue_A Carbon catabolite derep 100.0 1.2E-37 4.2E-42 319.0 17.2 235 507-749 12-251 (275)
108 3sxs_A Cytoplasmic tyrosine-pr 100.0 3.1E-37 1.1E-41 314.7 20.1 237 507-752 7-249 (268)
109 3kn6_A Ribosomal protein S6 ki 100.0 1.2E-37 4E-42 326.5 17.3 230 507-748 7-258 (325)
110 3e7e_A HBUB1, BUB1A, mitotic c 100.0 1.9E-37 6.7E-42 331.1 19.3 232 507-748 64-319 (365)
111 4hcu_A Tyrosine-protein kinase 100.0 1.8E-37 6.2E-42 316.6 18.2 237 507-752 9-251 (269)
112 1jl5_A Outer protein YOPM; leu 100.0 1.1E-36 3.6E-41 333.0 25.0 328 15-393 30-371 (454)
113 3uim_A Brassinosteroid insensi 100.0 7.6E-38 2.6E-42 329.1 15.4 219 495-715 17-237 (326)
114 3fdn_A Serine/threonine-protei 100.0 1.4E-37 4.7E-42 319.4 16.8 234 507-748 8-245 (279)
115 2qr7_A Ribosomal protein S6 ki 100.0 2.5E-37 8.6E-42 325.6 18.9 231 505-748 19-265 (342)
116 1jl5_A Outer protein YOPM; leu 100.0 1.7E-36 6E-41 331.3 26.0 348 18-414 10-371 (454)
117 4agu_A Cyclin-dependent kinase 100.0 2.7E-37 9.2E-42 322.6 18.7 235 507-748 2-272 (311)
118 3f3z_A Calcium/calmodulin-depe 100.0 6.4E-37 2.2E-41 314.1 21.1 232 506-748 7-249 (277)
119 4fmz_A Internalin; leucine ric 100.0 3.5E-36 1.2E-40 319.4 27.3 309 13-368 38-346 (347)
120 4euu_A Serine/threonine-protei 100.0 4.7E-37 1.6E-41 321.8 20.0 204 507-716 8-226 (319)
121 2qkw_B Protein kinase; three-h 100.0 1E-37 3.5E-42 327.1 15.0 243 502-750 33-298 (321)
122 3oja_B Anopheles plasmodium-re 100.0 1.9E-36 6.4E-41 344.6 26.5 311 18-370 50-360 (597)
123 3p1a_A MYT1 kinase, membrane-a 100.0 8.3E-37 2.8E-41 318.4 21.3 246 507-761 56-307 (311)
124 2a2a_A Death-associated protei 100.0 5.6E-37 1.9E-41 321.5 20.0 236 506-748 10-260 (321)
125 3kk8_A Calcium/calmodulin depe 100.0 1.3E-36 4.5E-41 313.0 21.7 235 506-748 4-249 (284)
126 2vgo_A Serine/threonine-protei 100.0 4E-37 1.4E-41 316.8 17.5 234 507-748 13-250 (284)
127 2h34_A Serine/threonine-protei 100.0 1.1E-36 3.8E-41 317.2 20.6 238 506-749 32-277 (309)
128 1u5q_A Serine/threonine protei 100.0 1.1E-36 3.8E-41 321.7 20.8 232 507-748 53-293 (348)
129 1nxk_A MAP kinase-activated pr 100.0 1.9E-36 6.4E-41 326.2 22.4 229 507-748 60-309 (400)
130 3gbz_A Kinase, CMGC CDK; ssgci 100.0 2.8E-37 9.4E-42 324.7 15.3 206 505-718 31-243 (329)
131 3lm5_A Serine/threonine-protei 100.0 1.4E-36 4.8E-41 319.0 20.7 247 496-748 16-275 (327)
132 3gen_A Tyrosine-protein kinase 100.0 6.8E-37 2.3E-41 314.9 17.9 237 507-752 23-265 (283)
133 3hko_A Calcium/calmodulin-depe 100.0 4.1E-37 1.4E-41 326.3 16.6 243 503-748 21-318 (345)
134 2x4f_A Myosin light chain kina 100.0 7.7E-37 2.6E-41 325.9 18.5 228 513-749 94-331 (373)
135 3cbl_A C-FES, proto-oncogene t 100.0 4.3E-37 1.5E-41 329.3 16.4 239 507-752 113-359 (377)
136 3mtl_A Cell division protein k 100.0 1.3E-37 4.3E-42 326.6 11.9 233 508-748 2-269 (324)
137 3oz6_A Mitogen-activated prote 100.0 7.1E-37 2.4E-41 329.4 17.9 205 505-718 6-236 (388)
138 2qol_A Ephrin receptor; recept 100.0 6.2E-37 2.1E-41 326.9 17.3 237 507-750 44-292 (373)
139 3nyv_A Calmodulin-domain prote 100.0 5.7E-37 2E-41 340.2 17.5 235 506-748 24-269 (484)
140 2yex_A Serine/threonine-protei 100.0 2.7E-36 9.3E-41 309.3 21.0 237 506-750 5-251 (276)
141 1rjb_A FL cytokine receptor; k 100.0 5.5E-37 1.9E-41 325.2 16.3 241 506-751 43-318 (344)
142 3a7i_A MST3 kinase, serine/thr 100.0 4.6E-36 1.6E-40 312.0 22.8 234 507-749 21-259 (303)
143 3is5_A Calcium-dependent prote 100.0 1.9E-36 6.5E-41 311.7 19.6 237 506-749 20-267 (285)
144 3byv_A Rhoptry kinase; malaria 100.0 1.4E-37 4.7E-42 333.5 11.5 234 507-749 72-348 (377)
145 1luf_A Muscle-specific tyrosin 100.0 9.4E-37 3.2E-41 323.3 17.7 240 506-750 45-318 (343)
146 3tt0_A Basic fibroblast growth 100.0 2E-36 6.9E-41 324.8 20.4 239 507-750 68-335 (382)
147 3l9p_A Anaplastic lymphoma kin 100.0 7.2E-37 2.5E-41 326.1 16.8 239 507-750 70-328 (367)
148 4aaa_A Cyclin-dependent kinase 100.0 1.4E-36 4.7E-41 319.9 18.6 236 506-748 23-294 (331)
149 2y7j_A Phosphorylase B kinase 100.0 2.7E-36 9.2E-41 321.4 21.0 245 499-750 85-349 (365)
150 3dbq_A Dual specificity protei 100.0 1.3E-36 4.3E-41 321.7 18.2 233 507-748 8-261 (343)
151 3g33_A Cell division protein k 100.0 3.2E-36 1.1E-40 313.8 21.0 250 506-761 7-299 (308)
152 3soc_A Activin receptor type-2 100.0 1.1E-36 3.7E-41 319.1 17.4 199 507-717 23-242 (322)
153 3ttj_A Mitogen-activated prote 100.0 9.1E-37 3.1E-41 334.5 17.3 200 507-717 61-267 (464)
154 3lb7_A RAF proto-oncogene seri 100.0 4.4E-36 1.5E-40 312.0 21.6 233 507-748 35-281 (307)
155 1x8b_A WEE1HU, WEE1-like prote 100.0 4.7E-36 1.6E-40 309.7 21.7 248 506-761 9-282 (289)
156 2izr_A Casein kinase I isoform 100.0 3.3E-37 1.1E-41 324.5 13.1 230 507-748 8-262 (330)
157 2ivs_A Proto-oncogene tyrosine 100.0 1.7E-36 5.9E-41 317.1 18.4 240 507-751 22-295 (314)
158 3dtc_A Mitogen-activated prote 100.0 2E-36 7E-41 309.3 18.5 236 507-752 6-258 (271)
159 3qup_A Tyrosine-protein kinase 100.0 1.7E-36 5.7E-41 318.4 18.1 242 507-752 22-283 (323)
160 3vhe_A Vascular endothelial gr 100.0 6.5E-37 2.2E-41 326.7 15.0 247 500-751 14-339 (359)
161 1k9a_A Carboxyl-terminal SRC k 100.0 4.2E-36 1.4E-40 329.0 21.8 232 507-751 192-429 (450)
162 2zmd_A Dual specificity protei 100.0 3.5E-36 1.2E-40 323.2 20.6 232 508-748 56-308 (390)
163 3n9x_A Phosphotransferase; mal 100.0 7.2E-36 2.5E-40 325.5 23.2 200 507-714 25-253 (432)
164 2i1m_A Macrophage colony-stimu 100.0 8.2E-37 2.8E-41 322.2 15.1 241 506-751 44-310 (333)
165 3mwu_A Calmodulin-domain prote 100.0 2.4E-36 8.1E-41 335.0 19.6 234 506-748 20-264 (486)
166 2wqm_A Serine/threonine-protei 100.0 8E-36 2.7E-40 311.2 22.2 243 506-751 30-281 (310)
167 2x7f_A TRAF2 and NCK-interacti 100.0 2.9E-36 9.8E-41 317.1 18.9 236 505-748 21-274 (326)
168 2eva_A TAK1 kinase - TAB1 chim 100.0 3.3E-36 1.1E-40 313.2 19.1 233 507-750 7-246 (307)
169 2w5a_A Serine/threonine-protei 100.0 2E-36 6.8E-41 310.8 17.2 242 507-752 5-259 (279)
170 3com_A Serine/threonine-protei 100.0 4.5E-36 1.5E-40 313.8 20.1 233 506-748 27-266 (314)
171 4f0f_A Serine/threonine-protei 100.0 1E-35 3.6E-40 306.7 22.5 236 507-752 18-274 (287)
172 2jam_A Calcium/calmodulin-depe 100.0 5E-36 1.7E-40 311.8 20.2 232 506-748 7-249 (304)
173 3bhy_A Death-associated protei 100.0 4.7E-36 1.6E-40 308.7 19.7 235 507-748 4-253 (283)
174 2nru_A Interleukin-1 receptor- 100.0 9.3E-36 3.2E-40 310.4 22.1 218 496-718 13-239 (307)
175 3rp9_A Mitogen-activated prote 100.0 3.4E-36 1.2E-40 331.5 19.9 203 507-717 52-299 (458)
176 3poz_A Epidermal growth factor 100.0 3E-36 1E-40 316.5 18.5 236 507-750 14-261 (327)
177 3q5i_A Protein kinase; CDPK, m 100.0 2.4E-36 8.3E-41 336.3 18.6 235 506-748 34-289 (504)
178 1ua2_A CAK, cell division prot 100.0 1.1E-36 3.9E-41 322.4 15.1 238 505-748 7-279 (346)
179 1mp8_A Focal adhesion kinase 1 100.0 3.1E-36 1.1E-40 309.5 17.8 238 507-752 14-261 (281)
180 3llt_A Serine/threonine kinase 100.0 3.3E-36 1.1E-40 321.2 18.6 202 504-717 31-263 (360)
181 2ac3_A MAP kinase-interacting 100.0 3.8E-36 1.3E-40 314.7 18.6 233 507-748 11-283 (316)
182 3i6u_A CDS1, serine/threonine- 100.0 1.9E-36 6.4E-41 328.5 16.7 236 505-748 132-387 (419)
183 1qcf_A Haematopoetic cell kina 100.0 1.5E-36 5.2E-41 333.1 16.1 238 506-752 186-429 (454)
184 3lij_A Calcium/calmodulin depe 100.0 3.5E-36 1.2E-40 334.2 19.2 234 506-748 35-279 (494)
185 2r3i_A Cell division protein k 100.0 2E-36 6.7E-41 314.2 16.0 236 507-748 2-271 (299)
186 3t9t_A Tyrosine-protein kinase 100.0 3E-36 1E-40 307.3 17.1 236 507-751 7-248 (267)
187 1t46_A HOMO sapiens V-KIT hard 100.0 4.6E-36 1.6E-40 313.7 18.9 240 507-751 22-291 (313)
188 2pvf_A Fibroblast growth facto 100.0 5.9E-36 2E-40 315.6 19.7 239 507-750 34-301 (334)
189 2h6d_A 5'-AMP-activated protei 100.0 2.7E-36 9.3E-41 309.3 16.5 235 507-748 10-249 (276)
190 3ugc_A Tyrosine-protein kinase 100.0 2.9E-36 9.9E-41 312.2 16.7 238 507-752 9-276 (295)
191 3kfa_A Tyrosine-protein kinase 100.0 9.9E-37 3.4E-41 314.6 13.1 237 506-750 11-254 (288)
192 1csn_A Casein kinase-1; phosph 100.0 2.3E-36 7.8E-41 313.6 15.8 231 507-748 9-264 (298)
193 3kmu_A ILK, integrin-linked ki 100.0 6.4E-36 2.2E-40 305.6 18.8 235 507-752 9-255 (271)
194 1vzo_A Ribosomal protein S6 ki 100.0 1.8E-36 6.1E-41 321.7 15.1 240 507-752 53-308 (355)
195 1cm8_A Phosphorylated MAP kina 100.0 6.3E-36 2.2E-40 318.6 19.3 230 507-748 24-295 (367)
196 2clq_A Mitogen-activated prote 100.0 1E-35 3.5E-40 308.2 20.3 237 508-750 22-268 (295)
197 3q60_A ROP5B; pseudokinase, tr 100.0 2.7E-36 9.2E-41 322.9 16.3 233 507-748 61-340 (371)
198 1qpc_A LCK kinase; alpha beta 100.0 7.1E-36 2.4E-40 306.6 18.8 235 507-750 12-252 (279)
199 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 3.2E-36 1.1E-40 330.1 17.1 236 507-751 183-424 (452)
200 1t4h_A Serine/threonine-protei 100.0 2.6E-35 8.9E-40 304.2 23.0 235 507-751 25-273 (290)
201 2ft3_A Biglycan; proteoglycan, 100.0 7.8E-35 2.7E-39 306.6 26.5 288 44-366 34-331 (332)
202 1xku_A Decorin; proteoglycan, 100.0 1.2E-34 4.2E-39 304.9 28.0 289 44-342 32-330 (330)
203 4eut_A Serine/threonine-protei 100.0 2.5E-36 8.7E-41 325.6 15.3 204 507-716 8-226 (396)
204 1p4o_A Insulin-like growth fac 100.0 1.5E-36 5.1E-41 318.7 13.1 240 505-749 22-281 (322)
205 1opk_A P150, C-ABL, proto-onco 100.0 3.7E-36 1.2E-40 333.1 16.9 237 507-751 219-462 (495)
206 1u59_A Tyrosine-protein kinase 100.0 1.4E-35 4.8E-40 305.6 20.0 236 507-750 8-255 (287)
207 2ft3_A Biglycan; proteoglycan, 100.0 8.1E-35 2.8E-39 306.4 26.1 299 15-342 29-331 (332)
208 4e7w_A Glycogen synthase kinas 100.0 3.3E-36 1.1E-40 324.0 15.7 231 507-748 39-309 (394)
209 2j7t_A Serine/threonine-protei 100.0 5.4E-36 1.8E-40 311.4 16.4 236 506-749 17-264 (302)
210 3eqc_A Dual specificity mitoge 100.0 3.8E-36 1.3E-40 320.6 15.6 201 507-717 32-234 (360)
211 3mi9_A Cell division protein k 100.0 1.3E-35 4.3E-40 315.4 19.4 205 507-718 16-234 (351)
212 3kex_A Receptor tyrosine-prote 100.0 3.9E-36 1.4E-40 315.5 15.2 235 507-749 12-258 (325)
213 1phk_A Phosphorylase kinase; g 100.0 3.4E-35 1.2E-39 304.7 22.1 239 505-750 14-273 (298)
214 4e5w_A Tyrosine-protein kinase 100.0 7E-36 2.4E-40 310.6 16.8 239 507-752 20-287 (302)
215 3pg1_A Mitogen-activated prote 100.0 2.1E-35 7E-40 315.3 20.3 242 500-748 14-304 (362)
216 3eb0_A Putative uncharacterize 100.0 4.7E-36 1.6E-40 322.3 15.3 232 505-748 4-309 (383)
217 1xku_A Decorin; proteoglycan, 100.0 4E-34 1.4E-38 301.0 29.7 289 68-366 32-330 (330)
218 2xrw_A Mitogen-activated prote 100.0 1.4E-35 4.8E-40 316.9 18.8 201 507-718 24-231 (371)
219 1j1b_A Glycogen synthase kinas 100.0 3.8E-36 1.3E-40 326.2 14.4 230 507-748 53-324 (420)
220 3nsz_A CK II alpha, casein kin 100.0 4.6E-35 1.6E-39 308.4 22.3 192 507-714 35-232 (330)
221 2ycf_A Serine/threonine-protei 100.0 9.7E-36 3.3E-40 312.3 16.9 235 506-748 8-262 (322)
222 3lzb_A Epidermal growth factor 100.0 1E-35 3.4E-40 312.3 17.0 236 507-750 14-261 (327)
223 3lxp_A Non-receptor tyrosine-p 100.0 2.1E-35 7.3E-40 308.8 19.5 235 508-751 30-294 (318)
224 1fvr_A Tyrosine-protein kinase 100.0 1.5E-35 5.3E-40 311.5 18.1 237 507-749 24-282 (327)
225 1mqb_A Ephrin type-A receptor 100.0 1.8E-35 6.2E-40 311.3 18.6 235 507-748 43-290 (333)
226 3brb_A Proto-oncogene tyrosine 100.0 3E-35 1E-39 307.3 20.1 242 506-751 32-292 (313)
227 2a19_B Interferon-induced, dou 100.0 1.3E-35 4.6E-40 305.5 16.9 232 506-750 9-257 (284)
228 3c1x_A Hepatocyte growth facto 100.0 8.7E-36 3E-40 317.6 15.6 236 508-750 89-338 (373)
229 3og7_A AKAP9-BRAF fusion prote 100.0 3E-35 1E-39 303.4 19.2 236 507-751 23-272 (289)
230 3cc6_A Protein tyrosine kinase 100.0 2.9E-35 9.8E-40 302.4 18.9 237 507-751 11-257 (281)
231 1xbb_A Tyrosine-protein kinase 100.0 9.2E-36 3.1E-40 307.7 15.3 236 506-749 14-261 (291)
232 2xir_A Vascular endothelial gr 100.0 1.7E-35 5.8E-40 309.8 17.4 245 501-750 20-293 (316)
233 3q4u_A Activin receptor type-1 100.0 2.7E-35 9.3E-40 306.0 18.8 235 507-752 7-287 (301)
234 3qyz_A Mitogen-activated prote 100.0 1.2E-35 4.2E-40 316.9 16.5 232 507-748 26-301 (364)
235 3lxl_A Tyrosine-protein kinase 100.0 2.6E-35 8.7E-40 309.8 18.7 237 507-751 22-287 (327)
236 2fst_X Mitogen-activated prote 100.0 1.1E-35 3.6E-40 316.4 15.9 200 507-718 28-235 (367)
237 3f66_A Hepatocyte growth facto 100.0 2.9E-35 9.9E-40 305.2 18.9 239 507-752 24-276 (298)
238 4fvq_A Tyrosine-protein kinase 100.0 1.2E-35 4.3E-40 306.5 15.9 233 507-751 7-259 (289)
239 1byg_A CSK, protein (C-termina 100.0 1.5E-35 5.1E-40 304.0 16.0 232 507-751 20-257 (278)
240 3op5_A Serine/threonine-protei 100.0 5.2E-36 1.8E-40 319.7 12.5 236 507-748 34-310 (364)
241 2vwi_A Serine/threonine-protei 100.0 6.6E-36 2.3E-40 311.0 12.8 239 506-749 13-276 (303)
242 2pml_X PFPK7, Ser/Thr protein 100.0 6.2E-36 2.1E-40 317.6 12.7 236 507-749 30-311 (348)
243 2yfx_A Tyrosine-protein kinase 100.0 2.8E-35 9.6E-40 309.5 17.3 238 507-749 29-286 (327)
244 1u46_A ACK-1, activated CDC42 100.0 2.5E-35 8.5E-40 304.7 16.5 238 507-750 17-267 (291)
245 2wtk_C Serine/threonine-protei 100.0 2.2E-35 7.6E-40 307.2 16.2 238 506-748 3-251 (305)
246 3ll6_A Cyclin G-associated kin 100.0 7.3E-35 2.5E-39 308.0 20.4 236 507-749 27-290 (337)
247 2h8h_A Proto-oncogene tyrosine 100.0 1.1E-35 3.8E-40 332.3 14.8 237 506-751 265-507 (535)
248 3fme_A Dual specificity mitoge 100.0 2.3E-35 7.8E-40 304.8 16.1 236 507-748 6-254 (290)
249 4hgt_A Casein kinase I isoform 100.0 1.5E-35 5.1E-40 307.2 14.6 232 506-748 7-261 (296)
250 2wei_A Calmodulin-domain prote 100.0 5.9E-35 2E-39 301.0 19.0 236 505-749 19-265 (287)
251 2buj_A Serine/threonine-protei 100.0 3.7E-35 1.2E-39 307.4 17.5 239 507-751 28-290 (317)
252 3kvw_A DYRK2, dual specificity 100.0 2.9E-35 9.8E-40 320.0 17.2 200 507-718 96-304 (429)
253 3uzp_A CKI-delta, CKID, casein 100.0 2.6E-35 8.8E-40 305.4 16.0 231 507-748 8-261 (296)
254 3pls_A Macrophage-stimulating 100.0 7.9E-35 2.7E-39 302.0 18.9 236 508-750 21-270 (298)
255 2ozo_A Tyrosine-protein kinase 100.0 5.5E-35 1.9E-39 331.2 18.3 233 508-748 335-579 (613)
256 3e3p_A Protein kinase, putativ 100.0 5.7E-35 1.9E-39 311.8 17.4 211 501-718 16-237 (360)
257 3mdy_A Bone morphogenetic prot 100.0 1.9E-34 6.3E-39 304.9 21.1 239 499-751 28-315 (337)
258 2jii_A Serine/threonine-protei 100.0 3.6E-35 1.2E-39 311.9 15.5 229 507-748 41-317 (352)
259 4exu_A Mitogen-activated prote 100.0 9.1E-35 3.1E-39 310.7 18.6 229 507-748 41-311 (371)
260 3rgf_A Cyclin-dependent kinase 100.0 3.2E-35 1.1E-39 318.3 15.0 202 507-717 19-240 (405)
261 3an0_A Dual specificity mitoge 100.0 3.6E-35 1.2E-39 310.5 14.9 235 507-748 50-298 (340)
262 2v62_A Serine/threonine-protei 100.0 1.7E-35 5.8E-40 313.3 12.3 235 507-748 36-309 (345)
263 2b9h_A MAP kinase FUS3, mitoge 100.0 1.2E-34 4E-39 308.4 18.7 232 507-748 10-293 (353)
264 1blx_A Cyclin-dependent kinase 100.0 1.1E-34 3.9E-39 304.9 18.2 236 506-748 9-284 (326)
265 1wak_A Serine/threonine-protei 100.0 7.9E-35 2.7E-39 315.2 17.4 199 507-717 36-297 (397)
266 3cek_A Dual specificity protei 100.0 1.6E-34 5.4E-39 301.8 18.5 234 506-748 26-280 (313)
267 3fhr_A MAP kinase-activated pr 100.0 1.6E-34 5.4E-39 304.4 18.3 230 506-748 26-275 (336)
268 3aln_A Dual specificity mitoge 100.0 1.3E-34 4.6E-39 304.4 17.4 235 507-748 21-273 (327)
269 3a99_A Proto-oncogene serine/t 100.0 1.9E-35 6.4E-40 309.4 10.8 235 505-750 40-283 (320)
270 2i6l_A Mitogen-activated prote 100.0 8.1E-35 2.8E-39 305.3 15.7 231 507-748 10-293 (320)
271 1zy4_A Serine/threonine-protei 100.0 5.9E-34 2E-38 296.2 22.0 244 506-761 4-286 (303)
272 3coi_A Mitogen-activated prote 100.0 2.4E-34 8.1E-39 305.7 19.1 229 507-748 23-293 (353)
273 1z57_A Dual specificity protei 100.0 4.1E-34 1.4E-38 302.5 20.6 200 507-718 13-239 (339)
274 4fl3_A Tyrosine-protein kinase 100.0 1.1E-34 3.9E-39 329.3 17.3 227 514-748 375-612 (635)
275 3sv0_A Casein kinase I-like; t 100.0 7.6E-35 2.6E-39 319.0 15.2 231 507-748 6-259 (483)
276 2iwi_A Serine/threonine-protei 100.0 8.3E-35 2.8E-39 303.8 14.7 235 503-748 26-271 (312)
277 2w1i_A JAK2; chromosomal rearr 100.0 1.6E-34 5.4E-39 303.5 15.9 237 507-751 40-306 (326)
278 3g2f_A Bone morphogenetic prot 100.0 1.5E-34 5E-39 305.4 14.6 194 507-714 12-236 (336)
279 2rio_A Serine/threonine-protei 100.0 2.2E-34 7.4E-39 313.8 15.9 231 508-748 15-283 (434)
280 2vx3_A Dual specificity tyrosi 100.0 5.7E-34 2E-38 305.9 18.9 203 506-718 52-263 (382)
281 3p23_A Serine/threonine-protei 100.0 5.5E-34 1.9E-38 309.4 18.0 231 507-749 23-272 (432)
282 1z7x_W Ribonuclease inhibitor; 100.0 2.6E-37 8.9E-42 341.7 -8.7 377 18-394 2-442 (461)
283 3gxj_A TGF-beta receptor type- 100.0 2.1E-35 7.1E-40 307.2 5.9 235 507-752 2-282 (303)
284 3qa8_A MGC80376 protein; kinas 100.0 2.2E-34 7.4E-39 321.3 14.4 204 506-715 12-225 (676)
285 2j0j_A Focal adhesion kinase 1 100.0 6.6E-34 2.2E-38 324.3 18.5 239 506-752 388-636 (656)
286 1b6c_B TGF-B superfamily recep 100.0 1.8E-33 6E-38 298.0 20.6 243 497-750 31-319 (342)
287 1z7x_W Ribonuclease inhibitor; 100.0 2.2E-37 7.5E-42 342.3 -9.9 371 42-412 2-439 (461)
288 2eu9_A Dual specificity protei 100.0 1.1E-33 3.7E-38 301.4 19.0 200 507-718 18-244 (355)
289 1q8y_A SR protein kinase; tran 100.0 1.6E-34 5.3E-39 310.0 12.4 199 507-717 18-239 (373)
290 3uqc_A Probable conserved tran 100.0 2.9E-33 9.9E-38 287.1 20.7 211 507-752 30-251 (286)
291 2dyl_A Dual specificity mitoge 100.0 1.2E-33 4.2E-38 296.0 17.8 234 507-748 24-271 (318)
292 2y4i_B KSR2, HKSR2, kinase sup 100.0 9E-35 3.1E-39 304.7 5.4 235 506-749 31-284 (319)
293 2vuw_A Serine/threonine-protei 100.0 5.6E-35 1.9E-39 308.3 3.4 229 507-748 19-323 (336)
294 2pzi_A Probable serine/threoni 100.0 1.4E-33 4.9E-38 325.2 14.1 223 507-748 79-308 (681)
295 1ogq_A PGIP-2, polygalacturona 100.0 6.6E-33 2.3E-37 288.5 17.5 248 20-294 51-302 (313)
296 1ogq_A PGIP-2, polygalacturona 100.0 5.8E-33 2E-37 289.0 16.7 249 116-391 51-303 (313)
297 3dzo_A Rhoptry kinase domain; 100.0 5.1E-33 1.7E-37 300.9 14.2 233 508-749 78-352 (413)
298 3m2w_A MAP kinase-activated pr 100.0 5.6E-32 1.9E-36 280.3 21.2 209 506-748 15-244 (299)
299 2z80_A TOLL-like receptor 2, v 100.0 3.4E-31 1.2E-35 281.3 18.4 277 41-320 29-314 (353)
300 2z66_A Variable lymphocyte rec 100.0 3.6E-31 1.2E-35 275.3 17.3 78 95-175 11-90 (306)
301 2z80_A TOLL-like receptor 2, v 100.0 3.5E-31 1.2E-35 281.2 17.3 276 19-297 31-315 (353)
302 2z66_A Variable lymphocyte rec 100.0 1.3E-30 4.4E-35 271.1 21.2 279 46-352 10-295 (306)
303 3zyi_A Leucine-rich repeat-con 100.0 7.1E-30 2.4E-34 280.6 26.0 248 44-296 55-303 (452)
304 3zyj_A Leucine-rich repeat-con 100.0 6.9E-30 2.4E-34 279.6 25.3 248 44-296 44-292 (440)
305 3zyj_A Leucine-rich repeat-con 100.0 9.8E-30 3.4E-34 278.4 25.6 248 68-320 44-292 (440)
306 3zyi_A Leucine-rich repeat-con 100.0 1.2E-29 4E-34 278.8 26.1 249 68-321 55-304 (452)
307 1ozn_A Reticulon 4 receptor; N 100.0 8.1E-30 2.8E-34 262.1 19.4 223 46-295 14-237 (285)
308 1ozn_A Reticulon 4 receptor; N 100.0 1.1E-29 3.7E-34 261.1 20.0 237 116-377 33-270 (285)
309 3g06_A SSPH2 (leucine-rich rep 100.0 2.8E-28 9.6E-33 274.1 28.7 267 45-355 42-308 (622)
310 3g06_A SSPH2 (leucine-rich rep 100.0 2.4E-28 8.2E-33 274.7 26.3 268 68-403 41-308 (622)
311 3o53_A Protein LRIM1, AGAP0063 100.0 2.9E-30 9.8E-35 269.4 7.8 255 47-339 14-270 (317)
312 3o53_A Protein LRIM1, AGAP0063 100.0 2.9E-30 9.8E-35 269.4 6.6 268 19-300 10-280 (317)
313 4azs_A Methyltransferase WBDD; 100.0 4.3E-30 1.5E-34 287.2 6.4 187 516-712 242-437 (569)
314 3ogk_B Coronatine-insensitive 100.0 2E-31 7E-36 304.3 -8.5 379 13-394 67-528 (592)
315 4fcg_A Uncharacterized protein 100.0 1.9E-27 6.5E-32 248.7 20.4 234 67-320 81-314 (328)
316 4fcg_A Uncharacterized protein 100.0 2.6E-27 9E-32 247.7 20.4 235 114-368 80-314 (328)
317 3ogk_B Coronatine-insensitive 99.9 1.3E-30 4.6E-35 297.5 -6.2 389 23-414 54-527 (592)
318 1wwl_A Monocyte differentiatio 99.9 3.3E-29 1.1E-33 260.7 4.4 58 306-368 252-309 (312)
319 1wwl_A Monocyte differentiatio 99.9 3E-29 1E-33 261.0 4.1 154 235-393 149-310 (312)
320 3oja_A Leucine-rich immune mol 99.9 6E-28 2E-32 266.4 11.9 234 92-339 35-270 (487)
321 3oja_A Leucine-rich immune mol 99.9 2.7E-28 9.1E-33 269.3 8.7 246 113-396 32-286 (487)
322 2z62_A TOLL-like receptor 4, v 99.9 3.8E-26 1.3E-30 233.5 21.6 204 68-272 29-237 (276)
323 2z62_A TOLL-like receptor 4, v 99.9 2.6E-26 8.9E-31 234.7 20.2 224 22-249 10-238 (276)
324 2o6q_A Variable lymphocyte rec 99.9 1.2E-25 4.1E-30 228.7 23.0 205 17-224 14-218 (270)
325 2o6q_A Variable lymphocyte rec 99.9 2.9E-25 1E-29 225.8 23.1 202 44-272 17-218 (270)
326 2p1m_B Transport inhibitor res 99.9 2.8E-29 9.5E-34 286.8 -7.7 391 12-406 59-534 (594)
327 3en9_A Glycoprotease, O-sialog 99.9 3.1E-26 1.1E-30 254.6 10.9 187 511-714 339-539 (540)
328 1p9a_G Platelet glycoprotein I 99.9 1.6E-24 5.5E-29 222.1 21.4 202 15-223 6-207 (290)
329 3rfs_A Internalin B, repeat mo 99.9 6.4E-25 2.2E-29 223.5 18.3 227 20-259 20-246 (272)
330 3rfs_A Internalin B, repeat mo 99.9 3.7E-25 1.3E-29 225.2 16.3 188 184-380 60-247 (272)
331 1p9a_G Platelet glycoprotein I 99.9 2.8E-24 9.4E-29 220.4 21.5 132 39-176 6-137 (290)
332 2p1m_B Transport inhibitor res 99.9 2.4E-28 8.2E-33 279.0 -10.7 373 16-391 102-543 (594)
333 2xwt_C Thyrotropin receptor; s 99.9 1.5E-24 5.2E-29 216.4 16.1 196 68-269 32-236 (239)
334 2xwt_C Thyrotropin receptor; s 99.9 1.8E-24 6E-29 215.9 15.5 205 31-245 23-236 (239)
335 3goz_A Leucine-rich repeat-con 99.9 8E-26 2.7E-30 240.5 4.0 108 24-131 3-125 (362)
336 3goz_A Leucine-rich repeat-con 99.9 1E-25 3.5E-30 239.7 4.2 107 48-154 3-124 (362)
337 3m19_A Variable lymphocyte rec 99.9 3E-23 1E-27 208.4 19.7 180 19-201 14-193 (251)
338 1h6u_A Internalin H; cell adhe 99.9 2.3E-23 7.9E-28 215.8 17.8 192 41-248 39-230 (308)
339 4glp_A Monocyte differentiatio 99.9 1.1E-23 3.7E-28 218.9 15.0 201 92-297 92-308 (310)
340 1h6u_A Internalin H; cell adhe 99.9 1.7E-23 6E-28 216.7 16.1 208 47-272 23-230 (308)
341 4ay9_X Follicle-stimulating ho 99.9 2.3E-23 8E-28 220.2 16.9 154 46-202 12-169 (350)
342 4ay9_X Follicle-stimulating ho 99.9 5.4E-23 1.9E-27 217.4 19.5 241 21-270 11-257 (350)
343 3m19_A Variable lymphocyte rec 99.9 7.7E-23 2.6E-27 205.5 19.6 180 43-225 14-193 (251)
344 4glp_A Monocyte differentiatio 99.9 1.2E-23 4E-28 218.7 12.2 226 19-249 64-308 (310)
345 2ca6_A RAN GTPase-activating p 99.9 1.8E-25 6.1E-30 240.3 -3.7 254 73-347 15-319 (386)
346 2ca6_A RAN GTPase-activating p 99.9 1.6E-25 5.5E-30 240.6 -4.3 255 49-323 15-319 (386)
347 2ast_B S-phase kinase-associat 99.9 2.6E-24 8.9E-29 226.8 3.8 253 45-328 49-314 (336)
348 2ast_B S-phase kinase-associat 99.9 3.1E-24 1.1E-28 226.2 3.8 198 20-221 48-257 (336)
349 1zar_A RIO2 kinase; serine kin 99.9 6.9E-23 2.4E-27 208.5 10.4 166 503-699 85-275 (282)
350 2o6s_A Variable lymphocyte rec 99.9 3.2E-21 1.1E-25 187.7 16.8 180 46-235 10-189 (208)
351 2o6s_A Variable lymphocyte rec 99.9 4.9E-21 1.7E-25 186.4 16.6 182 21-212 9-190 (208)
352 3sb4_A Hypothetical leucine ri 99.8 8.3E-22 2.8E-26 206.5 8.2 283 42-337 24-327 (329)
353 1h6t_A Internalin B; cell adhe 99.8 9.2E-21 3.1E-25 194.4 14.9 187 23-225 28-214 (291)
354 3cvr_A Invasion plasmid antige 99.8 1.4E-20 4.7E-25 208.9 16.6 194 20-258 60-253 (571)
355 2v9t_B SLIT homolog 2 protein 99.8 2.5E-20 8.5E-25 182.6 16.4 133 68-200 33-165 (220)
356 2xot_A Amphoterin-induced prot 99.8 1.6E-20 5.4E-25 199.3 15.7 175 47-224 22-202 (361)
357 2xot_A Amphoterin-induced prot 99.8 1.2E-20 4.3E-25 200.1 14.8 179 20-201 19-203 (361)
358 2v9t_B SLIT homolog 2 protein 99.8 4.7E-20 1.6E-24 180.7 16.9 153 21-176 13-165 (220)
359 1h6t_A Internalin B; cell adhe 99.8 1.4E-20 4.9E-25 193.0 13.1 165 46-224 27-191 (291)
360 3cvr_A Invasion plasmid antige 99.8 5.4E-20 1.8E-24 204.2 18.3 189 116-356 60-255 (571)
361 2v70_A SLIT-2, SLIT homolog 2 99.8 3.7E-20 1.3E-24 181.4 14.4 156 238-396 14-170 (220)
362 4fdw_A Leucine rich hypothetic 99.8 4.8E-19 1.6E-23 189.1 24.0 265 43-344 113-383 (401)
363 1m9s_A Internalin B; cell inva 99.8 3.3E-20 1.1E-24 208.4 15.4 188 21-224 23-210 (605)
364 4fdw_A Leucine rich hypothetic 99.8 5.6E-19 1.9E-23 188.6 24.2 269 15-320 109-383 (401)
365 3sb4_A Hypothetical leucine ri 99.8 3E-21 1E-25 202.2 6.5 285 17-314 23-328 (329)
366 1m9s_A Internalin B; cell inva 99.8 2.1E-20 7.1E-25 210.0 13.4 171 161-345 41-211 (605)
367 2v70_A SLIT-2, SLIT homolog 2 99.8 1.2E-19 4.2E-24 177.7 16.6 151 47-200 15-166 (220)
368 3e6j_A Variable lymphocyte rec 99.8 1.4E-19 4.6E-24 178.7 16.3 156 237-396 21-176 (229)
369 3e6j_A Variable lymphocyte rec 99.8 6.3E-19 2.1E-23 173.9 17.4 149 23-175 23-171 (229)
370 4fs7_A Uncharacterized protein 99.8 7.8E-18 2.7E-22 180.9 25.3 336 30-384 58-393 (394)
371 4fs7_A Uncharacterized protein 99.8 3.7E-18 1.3E-22 183.4 22.4 319 54-389 58-376 (394)
372 4ezg_A Putative uncharacterize 99.8 3.2E-19 1.1E-23 171.7 12.6 153 40-200 41-194 (197)
373 1xeu_A Internalin C; cellular 99.8 1.1E-19 3.7E-24 183.3 9.1 170 18-202 18-187 (263)
374 1xeu_A Internalin C; cellular 99.8 1.8E-19 6E-24 181.7 9.0 126 184-320 60-185 (263)
375 4ezg_A Putative uncharacterize 99.8 1E-18 3.5E-23 168.2 13.0 152 16-175 41-193 (197)
376 1w8a_A SLIT protein; signaling 99.8 1.6E-18 5.6E-23 165.8 11.7 156 260-416 30-186 (192)
377 1dce_A Protein (RAB geranylger 99.8 8.9E-21 3E-25 211.8 -5.9 187 137-346 347-548 (567)
378 1zth_A RIO1 serine protein kin 99.8 2.5E-18 8.7E-23 172.7 11.7 142 509-664 48-220 (258)
379 1dce_A Protein (RAB geranylger 99.7 1.5E-20 5.2E-25 209.9 -8.4 204 112-338 346-567 (567)
380 1w8a_A SLIT protein; signaling 99.7 3.2E-17 1.1E-21 156.7 13.1 175 214-395 11-186 (192)
381 4b8c_D Glucose-repressible alc 99.7 5E-18 1.7E-22 195.7 8.0 141 204-348 217-358 (727)
382 2ell_A Acidic leucine-rich nuc 99.7 2E-17 6.9E-22 154.7 9.9 132 43-176 24-160 (168)
383 2ell_A Acidic leucine-rich nuc 99.7 3.8E-17 1.3E-21 152.8 10.5 135 18-154 23-162 (168)
384 2wfh_A SLIT homolog 2 protein 99.7 1.7E-16 5.7E-21 151.7 14.5 127 46-176 13-139 (193)
385 2wfh_A SLIT homolog 2 protein 99.7 1.7E-16 5.9E-21 151.6 14.5 127 22-152 13-139 (193)
386 4b8c_D Glucose-repressible alc 99.7 1.1E-17 3.7E-22 192.9 7.2 163 216-389 206-369 (727)
387 4gt6_A Cell surface protein; l 99.7 3.3E-15 1.1E-19 160.3 24.7 330 37-391 57-390 (394)
388 2je0_A Acidic leucine-rich nuc 99.7 4.4E-17 1.5E-21 149.0 8.4 128 18-147 16-148 (149)
389 4gyi_A RIO2 kinase; protein ki 99.7 8E-17 2.7E-21 167.2 9.8 140 509-664 96-266 (397)
390 4gt6_A Cell surface protein; l 99.7 4.7E-15 1.6E-19 159.1 24.0 335 9-368 53-391 (394)
391 2je0_A Acidic leucine-rich nuc 99.7 9E-17 3.1E-21 146.9 8.5 127 43-171 17-148 (149)
392 2o6r_A Variable lymphocyte rec 99.7 9.8E-16 3.4E-20 144.5 15.1 128 46-176 10-137 (177)
393 2o6r_A Variable lymphocyte rec 99.7 1.2E-15 4.2E-20 143.8 15.1 129 21-152 9-137 (177)
394 1a9n_A U2A', U2A'; complex (nu 99.6 5.5E-16 1.9E-20 146.0 9.7 132 39-174 15-151 (176)
395 1a9n_A U2A', U2A'; complex (nu 99.6 6.7E-16 2.3E-20 145.4 9.6 137 13-153 13-154 (176)
396 1ds9_A Outer arm dynein; leuci 99.5 1.7E-17 5.9E-22 159.7 -9.8 135 15-154 14-155 (198)
397 1ds9_A Outer arm dynein; leuci 99.5 5.2E-17 1.8E-21 156.3 -6.6 132 254-392 43-185 (198)
398 3g39_A Variable lymphocyte rec 99.5 5E-14 1.7E-18 131.4 12.5 104 46-152 12-115 (170)
399 4h09_A Hypothetical leucine ri 99.5 1.6E-12 5.6E-17 138.7 24.4 314 39-378 42-355 (379)
400 2r9u_A Variable lymphocyte rec 99.5 8.7E-14 3E-18 130.2 12.7 104 46-152 15-118 (174)
401 3g39_A Variable lymphocyte rec 99.5 7.6E-14 2.6E-18 130.2 12.1 105 69-176 11-115 (170)
402 4h09_A Hypothetical leucine ri 99.5 2.3E-12 7.7E-17 137.6 24.4 302 15-354 42-355 (379)
403 2r9u_A Variable lymphocyte rec 99.5 1.2E-13 4.2E-18 129.2 12.1 104 70-176 15-118 (174)
404 3un9_A NLR family member X1; l 99.4 7.6E-15 2.6E-19 155.1 -7.0 138 91-228 101-256 (372)
405 3un9_A NLR family member X1; l 99.3 1.1E-14 3.7E-19 153.9 -7.0 182 43-224 72-283 (372)
406 3tm0_A Aminoglycoside 3'-phosp 99.3 5.5E-12 1.9E-16 127.1 11.5 148 503-662 9-213 (263)
407 2ifg_A High affinity nerve gro 99.3 7.2E-12 2.5E-16 131.9 11.3 102 48-152 13-116 (347)
408 2ifg_A High affinity nerve gro 99.3 7.4E-12 2.5E-16 131.8 11.2 103 71-176 12-116 (347)
409 1nd4_A Aminoglycoside 3'-phosp 99.1 1.1E-10 3.7E-15 117.5 8.6 139 507-662 19-214 (264)
410 3dxp_A Putative acyl-COA dehyd 99.0 6.3E-10 2.2E-14 117.5 10.0 144 512-663 42-249 (359)
411 2ra8_A Uncharacterized protein 99.0 1.2E-10 4.2E-15 121.6 3.0 83 186-270 251-341 (362)
412 2ra8_A Uncharacterized protein 99.0 1E-10 3.6E-15 122.2 2.2 81 16-99 136-227 (362)
413 3sg8_A APH(2'')-ID; antibiotic 98.9 4.2E-10 1.5E-14 115.8 4.2 187 513-715 25-289 (304)
414 3r70_A Aminoglycoside phosphot 98.8 1.7E-08 5.7E-13 104.5 9.7 138 509-664 38-239 (320)
415 1io0_A Tropomodulin; LRR prote 98.6 6E-09 2E-13 98.2 1.0 92 37-128 30-136 (185)
416 1io0_A Tropomodulin; LRR prote 98.5 9.7E-09 3.3E-13 96.7 0.2 67 62-128 31-106 (185)
417 4gkh_A Aminoglycoside 3'-phosp 98.5 1E-06 3.5E-11 88.7 13.3 142 507-662 24-223 (272)
418 3tdw_A Gentamicin resistance p 98.4 1.9E-06 6.6E-11 88.2 13.6 138 513-664 24-226 (306)
419 3rw6_A Nuclear RNA export fact 98.4 2.7E-08 9.1E-13 98.3 -1.4 81 88-170 167-258 (267)
420 3rw6_A Nuclear RNA export fact 98.4 3.3E-08 1.1E-12 97.7 -1.1 81 64-145 167-257 (267)
421 3d1u_A Putative fructosamine-3 98.4 2.6E-06 8.8E-11 86.1 12.7 76 512-594 19-97 (288)
422 3ovc_A Hygromycin-B 4-O-kinase 98.3 5.5E-06 1.9E-10 86.8 13.1 77 509-594 42-121 (362)
423 3e4g_A ATP synthase subunit S, 98.1 5.2E-07 1.8E-11 82.4 1.6 34 140-173 115-149 (176)
424 3ats_A Putative uncharacterize 98.1 4.7E-06 1.6E-10 87.5 8.4 80 513-595 25-121 (357)
425 3e4g_A ATP synthase subunit S, 98.1 8.2E-07 2.8E-11 81.1 1.9 84 67-150 61-150 (176)
426 2q83_A YTAA protein; 2635576, 98.0 1.6E-05 5.4E-10 83.0 10.2 141 514-662 38-252 (346)
427 2olc_A MTR kinase, methylthior 97.9 2.1E-05 7E-10 83.9 9.7 78 513-592 35-120 (397)
428 3jr1_A Putative fructosamine-3 97.8 0.00014 4.7E-09 73.9 11.7 75 513-594 41-118 (312)
429 1pgv_A TMD-1, tropomodulin TMD 97.7 9.8E-06 3.3E-10 75.4 2.0 65 40-104 38-111 (197)
430 2pyw_A Uncharacterized protein 97.6 0.00021 7.2E-09 76.6 11.7 78 631-710 231-313 (420)
431 3f7w_A Putative fructosamine-3 97.6 0.00037 1.3E-08 70.4 12.9 79 509-594 16-97 (288)
432 1pgv_A TMD-1, tropomodulin TMD 97.6 1.2E-05 4.1E-10 74.8 1.4 62 138-199 97-169 (197)
433 1zyl_A Hypothetical protein YI 97.6 0.0009 3.1E-08 69.0 14.7 160 497-663 10-224 (328)
434 2ppq_A HSK, HK, homoserine kin 97.4 0.0011 3.9E-08 68.0 13.6 159 498-662 7-217 (322)
435 3csv_A Aminoglycoside phosphot 97.4 0.00052 1.8E-08 71.0 10.5 142 515-664 25-219 (333)
436 3feg_A Choline/ethanolamine ki 97.2 0.00085 2.9E-08 70.1 9.6 141 514-662 56-254 (379)
437 1nw1_A Choline kinase (49.2 KD 97.2 0.00093 3.2E-08 71.5 10.0 73 513-594 78-159 (429)
438 3dxq_A Choline/ethanolamine ki 97.2 0.00099 3.4E-08 67.7 9.4 139 513-663 23-203 (301)
439 3rfe_A Platelet glycoprotein I 97.1 0.00037 1.3E-08 60.5 4.8 37 357-393 33-69 (130)
440 3rfe_A Platelet glycoprotein I 97.1 0.00094 3.2E-08 58.0 6.6 34 117-150 33-66 (130)
441 2qg7_A Ethanolamine kinase PV0 96.9 0.0051 1.7E-07 66.0 12.4 74 513-594 113-188 (458)
442 3i1a_A Spectinomycin phosphotr 96.9 0.0056 1.9E-07 63.2 12.0 33 631-663 205-237 (339)
443 3c5i_A Choline kinase; choline 96.8 0.0019 6.7E-08 67.7 7.8 74 513-594 38-121 (369)
444 3f2s_A CK, chetk-alpha, cholin 96.3 0.012 4.2E-07 61.5 9.9 145 514-662 58-280 (401)
445 3mes_A Choline kinase; malaria 95.8 0.04 1.4E-06 58.3 11.0 141 513-662 75-291 (424)
446 2yle_A Protein spire homolog 1 95.0 0.1 3.5E-06 48.7 9.4 124 592-747 33-156 (229)
447 3g15_A CK, chetk-alpha, cholin 93.8 0.23 7.7E-06 52.3 10.2 31 633-663 245-281 (401)
448 2l2t_A Receptor tyrosine-prote 92.0 0.1 3.5E-06 34.4 2.6 26 448-473 15-40 (44)
449 2ks1_B Epidermal growth factor 91.9 0.19 6.4E-06 33.2 3.8 29 445-473 13-41 (44)
450 2jwa_A Receptor tyrosine-prote 88.7 0.39 1.3E-05 31.6 3.1 6 446-451 15-20 (44)
451 4ann_A ESSB; membrane protein, 87.9 1.1 3.8E-05 41.7 7.1 118 565-718 43-162 (215)
452 4ano_A ESSB; membrane protein, 86.3 2.8 9.5E-05 39.2 8.8 118 565-718 48-167 (219)
453 2lz0_A Uncharacterized protein 85.2 1.9 6.3E-05 34.8 6.3 17 106-122 11-27 (100)
454 2lz0_A Uncharacterized protein 81.8 3.1 0.00011 33.5 6.2 48 77-125 6-53 (100)
455 2k1k_A Ephrin type-A receptor 79.0 1.2 4.2E-05 28.4 2.3 23 446-468 14-36 (38)
456 1afo_A Glycophorin A; integral 70.1 4.7 0.00016 25.3 3.1 29 444-472 11-39 (40)
457 3cxl_A N-chimerin; SH2, RHO-GA 66.7 0.63 2.1E-05 49.8 -2.2 62 512-577 146-214 (463)
458 2jwa_A Receptor tyrosine-prote 60.8 13 0.00043 24.5 4.0 10 447-456 13-22 (44)
459 2l9u_A Receptor tyrosine-prote 49.7 20 0.00067 21.7 3.2 23 449-471 12-34 (40)
460 2l2t_A Receptor tyrosine-prote 47.0 31 0.001 22.7 4.1 31 447-477 11-41 (44)
461 2ks1_B Epidermal growth factor 46.2 25 0.00084 23.2 3.6 33 444-476 9-41 (44)
462 2knc_A Integrin alpha-IIB; tra 45.2 21 0.00072 24.7 3.3 7 448-454 15-21 (54)
463 2l8s_A Integrin alpha-1; trans 44.3 21 0.0007 24.6 3.1 8 447-454 11-18 (54)
464 2jo1_A Phospholemman; FXYD1, N 41.1 26 0.00087 25.4 3.3 21 444-464 17-37 (72)
465 2klu_A T-cell surface glycopro 39.7 29 0.001 24.8 3.4 18 448-465 12-29 (70)
466 3ls8_A Phosphatidylinositol 3- 39.2 1.9E+02 0.0063 31.6 11.4 84 570-661 402-501 (614)
467 2k1a_A Integrin alpha-IIB; sin 33.9 45 0.0015 21.7 3.4 12 445-456 10-21 (42)
468 1pi7_A VPU protein, U ORF prot 32.3 48 0.0016 20.7 3.1 22 448-469 8-29 (36)
469 2jp3_A FXYD domain-containing 27.6 28 0.00097 25.0 1.7 20 444-463 18-37 (67)
470 1cja_A Protein (actin-fragmin 24.3 1.7E+02 0.0058 29.1 7.3 140 510-662 71-237 (342)
471 2lx0_A Membrane fusion protein 23.4 1.1E+02 0.0038 17.4 3.7 22 447-469 7-28 (32)
472 1zza_A Stannin, AG8_1; helix, 20.1 1.4E+02 0.0047 21.6 4.1 14 458-471 28-41 (90)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=7.4e-51 Score=476.68 Aligned_cols=398 Identities=37% Similarity=0.530 Sum_probs=330.3
Q ss_pred cCCCeeEEEeCCCCccccCCccccCC-CCCcEEEcCCCcCcccCCccccCCCCCCEEEccCCcCcccCCcc-cCCCCCCC
Q 004268 17 CFPNLVTFRIWGTLLSGRMPSEIGAL-SKLEKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTGTIPSE-IGSLRDLL 94 (764)
Q Consensus 17 ~~~~l~~L~l~~~~~~~~~~~~~~~l-~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~-~~~l~~L~ 94 (764)
.+++|+.|++++|.+++.+|..+... ++|++|+|++|++++..|..|..+++|++|+|++|.+++.+|.. |..+++|+
T Consensus 267 ~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~ 346 (768)
T 3rgz_A 267 PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLK 346 (768)
T ss_dssp CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCC
T ss_pred ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCC
Confidence 45556666666666666666666554 67777777777776666667777777777777777776555544 66777777
Q ss_pred EEecCCCcccccCCccCcCCC-CCCEEEccCCcCcccCCccccC--CCCcCEEecccCcccccCCccccCCCCCCeeecc
Q 004268 95 DLNLSNNILNGSIPLEFGNLK-DLDQLRLQGNKLDGLIPSSIGN--LTNLTYLDLSLNQLSGRLPQEVGNLKNLKSLFLD 171 (764)
Q Consensus 95 ~L~L~~n~l~~~~~~~~~~l~-~L~~L~L~~n~l~~~~~~~~~~--l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 171 (764)
+|+|++|.+++..|..+..++ +|++|++++|.+.+..+..+.. +++|++|++++|++++..|..|.++++|+.|+++
T Consensus 347 ~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls 426 (768)
T 3rgz_A 347 VLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLS 426 (768)
T ss_dssp EEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGCTTCCEEECC
T ss_pred EEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCccccccCHHHhcCCCCCEEECc
Confidence 777777777666666666665 6777777777776655666555 6788888888888888888889999999999999
Q ss_pred cCCCCCCCCCccccCCCccEEEecCccCcCCcccccCCccccceeeccCcccccccCccccCCCCCCEEEccCCcccCCC
Q 004268 172 NNHLSGPIPSTLYHLNQLATLCLGYNKLVGPVTKEVGNMKNLDRLHLNGNNLTGSIPSTIGYLNLLDELHLSHNRLDGPI 251 (764)
Q Consensus 172 ~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 251 (764)
+|.+++..+..+..+++|+.|++++|.+....+..+..+++|++|++++|++++..|..+..+++|+.|+|++|++.+..
T Consensus 427 ~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~ 506 (768)
T 3rgz_A 427 FNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEI 506 (768)
T ss_dssp SSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCC
T ss_pred CCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcC
Confidence 99998888888999999999999999998888888889999999999999999888999999999999999999999889
Q ss_pred CcCCcCCCCCCeEEccCCcccCCCCccccCCCCCCeEeccCccccCCCCC------------------------------
Q 004268 252 PPTIGNLTNLIALDLSSNQLSGLLPREVGNLKYLASLSLNGNILIGPIPP------------------------------ 301 (764)
Q Consensus 252 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~------------------------------ 301 (764)
|..++.+++|+.|+|++|++.+..|..+..+++|+.|++++|.+.+.+|.
T Consensus 507 p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 586 (768)
T 3rgz_A 507 PKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKE 586 (768)
T ss_dssp CGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTT
T ss_pred ChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhcccccccccccccccccc
Confidence 99999999999999999999988899999999999999999988765553
Q ss_pred ----------------------------------------CCCCCCccceEEccCCcCccCCChhhhcccccceeecccc
Q 004268 302 ----------------------------------------TIGYLTNLTYLNLGYNRLSSSIPPELMNCSQLLNLVLSHN 341 (764)
Q Consensus 302 ----------------------------------------~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N 341 (764)
.+..+++|++|+|++|++++.+|..+.++++|+.|+|++|
T Consensus 587 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N 666 (768)
T 3rgz_A 587 CHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHN 666 (768)
T ss_dssp CCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSS
T ss_pred ccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCC
Confidence 2444678999999999999999999999999999999999
Q ss_pred ccccCCchhcccccccceeecccccccCCCCCCCCCCCccceecCCCCccccccCC--ccccCccccccCCCCCC
Q 004268 342 SLSGSIPSEIGNLIFFRQLDLSRNFINGTIPSQLGKIPNISAVDLSKNNLSGVIPA--SVRRIPKLIVSENNLEL 414 (764)
Q Consensus 342 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~--~~~~~~~~~~~~n~~~~ 414 (764)
++++.+|..+.++++|+.|||++|++++.+|..+..+++|+.||+++|+++|.+|. .+..++...+.+|+.-|
T Consensus 667 ~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lc 741 (768)
T 3rgz_A 667 DISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLC 741 (768)
T ss_dssp CCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSSSSGGGSCGGGGCSCTEEE
T ss_pred ccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCchhhccCCHHHhcCCchhc
Confidence 99999999999999999999999999999999999999999999999999999996 57788888888887544
No 2
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=3e-51 Score=416.78 Aligned_cols=235 Identities=23% Similarity=0.364 Sum_probs=204.4
Q ss_pred hcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEEEEEE
Q 004268 508 EDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFLIY 586 (764)
Q Consensus 508 ~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 586 (764)
++|++.+.||+|+||+||+|++. +|+.||+|++.+.........+.+.+|++++++++||||+++++++++++.+|+||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 57999999999999999999864 79999999997543322223478899999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeeccccccCCC
Q 004268 587 EYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLARLLHPD 666 (764)
Q Consensus 587 e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 666 (764)
|||+||+|.+++++ ...+++..++.++.||+.||+||| ++||+||||||+|||++.++.+||+|||+|+.....
T Consensus 112 Ey~~gG~L~~~i~~---~~~l~e~~~~~~~~qi~~al~ylH---~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~ 185 (311)
T 4aw0_A 112 SYAKNGELLKYIRK---IGSFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 185 (311)
T ss_dssp CCCTTEEHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred ecCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCC
Confidence 99999999999973 456999999999999999999999 899999999999999999999999999999887543
Q ss_pred C--CCceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCccccccc---ccCCcCCCCCCCcHHHHHHH
Q 004268 667 S--SNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSS---SSGRKISQNPRLDLQCNAYL 741 (764)
Q Consensus 667 ~--~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 741 (764)
. ......+||+.|||||++.+..|+.++||||+||++|+|+||++||.+.+..+. ........+..++.++.+++
T Consensus 186 ~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~p~~~s~~~~dli 265 (311)
T 4aw0_A 186 SKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPKARDLV 265 (311)
T ss_dssp TTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTCCHHHHHHH
T ss_pred CCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCcccCHHHHHHH
Confidence 2 234557899999999999999999999999999999999999999987654322 12233344567899999999
Q ss_pred hhhhccc
Q 004268 742 KNFSQGN 748 (764)
Q Consensus 742 ~~~l~~~ 748 (764)
++|++.+
T Consensus 266 ~~lL~~d 272 (311)
T 4aw0_A 266 EKLLVLD 272 (311)
T ss_dssp HHHSCSS
T ss_pred HHHccCC
Confidence 9999988
No 3
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=1e-49 Score=466.92 Aligned_cols=399 Identities=35% Similarity=0.571 Sum_probs=314.8
Q ss_pred cccCCCeeEEEeCCCCccccCCccccCCCCCcEEEcCCCcCcccCCccccCCCCCCEEEccCCcCcccCCcccCCC-CCC
Q 004268 15 FTCFPNLVTFRIWGTLLSGRMPSEIGALSKLEKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTGTIPSEIGSL-RDL 93 (764)
Q Consensus 15 ~~~~~~l~~L~l~~~~~~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l-~~L 93 (764)
|..+++|+.|++++|.+++.+|..+..+++|++|+|++|.+++..|.. .+++|++|+|++|++++.+|..+..+ ++|
T Consensus 219 l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~--~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L 296 (768)
T 3rgz_A 219 LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTL 296 (768)
T ss_dssp CTTCCSCCEEECCSSCCCSCHHHHTTTCSSCCEEECCSSCCEESCCCC--CCTTCCEEECCSSEEEESCCCCSCTTCTTC
T ss_pred cccCCCCCEEECcCCcCCCcccHHHhcCCCCCEEECCCCcccCccCcc--ccCCCCEEECcCCccCCccCHHHHhhcCcC
Confidence 778888888888888888888888888888888888888877655533 55566666666666655555555443 556
Q ss_pred CEEecCCCcccccCCccCcCCCCCCEEEccCCcCcccCCc-cccCCCCcCEEecccCcccccC-----------------
Q 004268 94 LDLNLSNNILNGSIPLEFGNLKDLDQLRLQGNKLDGLIPS-SIGNLTNLTYLDLSLNQLSGRL----------------- 155 (764)
Q Consensus 94 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~-~~~~l~~L~~L~L~~n~l~~~~----------------- 155 (764)
++|+|++|.+++..|..|.++++|++|+|++|.+.+..|. .|.++++|++|+|++|++++..
T Consensus 297 ~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls 376 (768)
T 3rgz_A 297 TGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLS 376 (768)
T ss_dssp SEEECCSSEEEECCCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECC
T ss_pred CEEECcCCcCCCccchHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEcc
Confidence 6666666655555555555555555555555555533332 2555555555555555554333
Q ss_pred --------CccccC--CCCCCeeecccCCCCCCCCCccccCCCccEEEecCccCcCCcccccCCccccceeeccCccccc
Q 004268 156 --------PQEVGN--LKNLKSLFLDNNHLSGPIPSTLYHLNQLATLCLGYNKLVGPVTKEVGNMKNLDRLHLNGNNLTG 225 (764)
Q Consensus 156 --------~~~~~~--l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~ 225 (764)
+..+.. +++|++|++++|.+++..+..+..+++|+.|++++|++.+..+..+..+++|++|++++|.+++
T Consensus 377 ~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~ 456 (768)
T 3rgz_A 377 SNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEG 456 (768)
T ss_dssp SSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCS
T ss_pred CCCcCCCcChhhhhcccCCccEEECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccC
Confidence 334433 5667777777777776777888888999999999999888888888899999999999999998
Q ss_pred ccCccccCCCCCCEEEccCCcccCCCCcCCcCCCCCCeEEccCCcccCCCCccccCCCCCCeEeccCccccCCCCCCCCC
Q 004268 226 SIPSTIGYLNLLDELHLSHNRLDGPIPPTIGNLTNLIALDLSSNQLSGLLPREVGNLKYLASLSLNGNILIGPIPPTIGY 305 (764)
Q Consensus 226 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 305 (764)
..|..+..+++|+.|++++|.+++..|..+..+++|+.|+|++|++.+..|..+..+++|+.|++++|++.+..|..+..
T Consensus 457 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~ 536 (768)
T 3rgz_A 457 EIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGD 536 (768)
T ss_dssp CCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGG
T ss_pred cCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcC
Confidence 88889999999999999999999888989999999999999999999889999999999999999999999888999999
Q ss_pred CCccceEEccCCcCccCCChhhh---------------------------------------------------------
Q 004268 306 LTNLTYLNLGYNRLSSSIPPELM--------------------------------------------------------- 328 (764)
Q Consensus 306 l~~L~~L~ls~N~l~~~~~~~~~--------------------------------------------------------- 328 (764)
+++|++|++++|++++.+|..+.
T Consensus 537 l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~ 616 (768)
T 3rgz_A 537 CRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNIT 616 (768)
T ss_dssp CTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTT
T ss_pred CCCCCEEECCCCccCCcCChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccc
Confidence 99999999999998876665442
Q ss_pred -------------cccccceeeccccccccCCchhcccccccceeecccccccCCCCCCCCCCCccceecCCCCcccccc
Q 004268 329 -------------NCSQLLNLVLSHNSLSGSIPSEIGNLIFFRQLDLSRNFINGTIPSQLGKIPNISAVDLSKNNLSGVI 395 (764)
Q Consensus 329 -------------~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~ 395 (764)
.+++|+.|+|++|++++.+|..+.+++.|+.|+|++|++++.+|..+.++++|+.|||++|+++|.+
T Consensus 617 ~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~i 696 (768)
T 3rgz_A 617 SRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRI 696 (768)
T ss_dssp SCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECC
T ss_pred cceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcC
Confidence 3467889999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccc---cCccccccCCCCCCC
Q 004268 396 PASVR---RIPKLIVSENNLELE 415 (764)
Q Consensus 396 ~~~~~---~~~~~~~~~n~~~~~ 415 (764)
|..+. .+..+++++|++.+.
T Consensus 697 p~~l~~l~~L~~L~ls~N~l~g~ 719 (768)
T 3rgz_A 697 PQAMSALTMLTEIDLSNNNLSGP 719 (768)
T ss_dssp CGGGGGCCCCSEEECCSSEEEEE
T ss_pred ChHHhCCCCCCEEECcCCccccc
Confidence 98664 677889999988643
No 4
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=3.7e-50 Score=415.82 Aligned_cols=237 Identities=22% Similarity=0.342 Sum_probs=199.2
Q ss_pred hhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEEEEE
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFLI 585 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 585 (764)
.++|++.+.||+|+||+||+|++. +|+.||||++....... ...+.+.+|++++++++|||||++++++.+++.+|+|
T Consensus 23 me~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~-~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiV 101 (350)
T 4b9d_A 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSS-KEREESRREVAVLANMKHPNIVQYRESFEENGSLYIV 101 (350)
T ss_dssp CCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCH-HHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred ccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCH-HHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEE
Confidence 478999999999999999999865 79999999998765443 3467899999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeeccccccCC
Q 004268 586 YEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLARLLHP 665 (764)
Q Consensus 586 ~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 665 (764)
||||+||+|.+++... ....+++..++.|+.||+.||+||| ++|||||||||+|||++++|.+||+|||+|+....
T Consensus 102 mEy~~gg~L~~~i~~~-~~~~~~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~ 177 (350)
T 4b9d_A 102 MDYCEGGDLFKRINAQ-KGVLFQEDQILDWFVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNS 177 (350)
T ss_dssp EECCTTCBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHH---HTTCEETTCCGGGEEECTTCCEEECSTTEESCCCH
T ss_pred EeCCCCCcHHHHHHHc-CCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCHHHEEECCCCCEEEcccccceeecC
Confidence 9999999999999743 3445789999999999999999999 89999999999999999999999999999987653
Q ss_pred CCCCceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccccccccC----CcCCCCCCCcHHHHHHH
Q 004268 666 DSSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSSSSG----RKISQNPRLDLQCNAYL 741 (764)
Q Consensus 666 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 741 (764)
........+||+.|||||++.+..|+.++||||+||++|||+||++||.+.+..+.... ........++.++.+++
T Consensus 178 ~~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~~~~~~s~~~~~li 257 (350)
T 4b9d_A 178 TVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPVSLHYSYDLRSLV 257 (350)
T ss_dssp HHHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCCTTSCHHHHHHH
T ss_pred CcccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCCccCCHHHHHHH
Confidence 33333456899999999999999999999999999999999999999987765332211 12233456789999999
Q ss_pred hhhhccc
Q 004268 742 KNFSQGN 748 (764)
Q Consensus 742 ~~~l~~~ 748 (764)
++||+.+
T Consensus 258 ~~~L~~d 264 (350)
T 4b9d_A 258 SQLFKRN 264 (350)
T ss_dssp HHHTCSS
T ss_pred HHHccCC
Confidence 9999988
No 5
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=1.7e-49 Score=410.23 Aligned_cols=231 Identities=25% Similarity=0.415 Sum_probs=202.9
Q ss_pred hcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEEEEEE
Q 004268 508 EDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFLIY 586 (764)
Q Consensus 508 ~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 586 (764)
+.|++.+.||+|+||+||+|+++ +|+.||||++....... .+.+.+|++++++++|||||++++++.+++.+|+||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~---~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivm 150 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR---RELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVM 150 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSS---GGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhH---HHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 56999999999999999999865 79999999997654433 256789999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeeccccccCCC
Q 004268 587 EYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLARLLHPD 666 (764)
Q Consensus 587 e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 666 (764)
|||+||+|.+++.. ..+++..++.++.||+.||+||| ++|||||||||+|||++.+|.+||+|||+|+.....
T Consensus 151 Ey~~gg~L~~~l~~----~~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 223 (346)
T 4fih_A 151 EFLEGGALTDIVTH----TRMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE 223 (346)
T ss_dssp CCCTTEEHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSS
T ss_pred eCCCCCcHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEECCCCCEEEecCcCceecCCC
Confidence 99999999999964 35899999999999999999999 899999999999999999999999999999987666
Q ss_pred CCCceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccccccccC------CcCCCCCCCcHHHHHH
Q 004268 667 SSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSSSSG------RKISQNPRLDLQCNAY 740 (764)
Q Consensus 667 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~~~~------~~~~~~~~~~~~~~~~ 740 (764)
.......+||+.|||||++.+..|+.++||||+||++|||++|++||.+.+..+.... ......+.++..+.++
T Consensus 224 ~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dl 303 (346)
T 4fih_A 224 VPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGF 303 (346)
T ss_dssp SCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCCCSCGGGSCHHHHHH
T ss_pred CCcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCCccccCCHHHHHH
Confidence 5566678999999999999999999999999999999999999999987665332111 1222334578899999
Q ss_pred Hhhhhccc
Q 004268 741 LKNFSQGN 748 (764)
Q Consensus 741 ~~~~l~~~ 748 (764)
+++||+.+
T Consensus 304 i~~~L~~d 311 (346)
T 4fih_A 304 LDRLLVRD 311 (346)
T ss_dssp HHHHSCSS
T ss_pred HHHHcCCC
Confidence 99999988
No 6
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=8.7e-48 Score=455.33 Aligned_cols=408 Identities=24% Similarity=0.227 Sum_probs=304.7
Q ss_pred CcccccccccccCCCeeEEEeCCCCccccCCccccCCCCCcEEEcCCCcC-cccCCccccCCCCCCEEEccCCcCcccCC
Q 004268 6 TGAELSQLNFTCFPNLVTFRIWGTLLSGRMPSEIGALSKLEKLVLSHNSL-TGRIPSEIGALSRLKVLDLSYNRLTGTIP 84 (764)
Q Consensus 6 ~~~~~~~~~~~~~~~l~~L~l~~~~~~~~~~~~~~~l~~L~~L~Ls~n~i-~~~~~~~~~~l~~L~~L~L~~n~i~~~~~ 84 (764)
.+..+.+.+- -.++++.|+|++|.+++..|..|..+++|++|+|++|.. ..+.|.+|.++++|++|+|++|.|++..|
T Consensus 12 s~~~L~~vP~-lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p 90 (844)
T 3j0a_A 12 RFCNLTQVPQ-VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHP 90 (844)
T ss_dssp SCCCSSCCCS-SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECT
T ss_pred cCCCCCCCCC-CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCH
Confidence 3444555554 456788888888888888888888888888888888844 34457888888888888888888888788
Q ss_pred cccCCCCCCCEEecCCCcccccCCc--cCcCCCCCCEEEccCCcCcccCC-ccccCCCCcCEEecccCcccccCCccccC
Q 004268 85 SEIGSLRDLLDLNLSNNILNGSIPL--EFGNLKDLDQLRLQGNKLDGLIP-SSIGNLTNLTYLDLSLNQLSGRLPQEVGN 161 (764)
Q Consensus 85 ~~~~~l~~L~~L~L~~n~l~~~~~~--~~~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 161 (764)
.+|.++++|++|+|++|.+++..+. .|.++++|++|+|++|.+.++.+ ..|.++++|++|+|++|.++++.+..|..
T Consensus 91 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~ 170 (844)
T 3j0a_A 91 DAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEP 170 (844)
T ss_dssp TSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHH
T ss_pred hHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHccc
Confidence 8888888888888888888864444 38888888888888888887654 46888888888888888887766666554
Q ss_pred C--CC------------------------------CCeeecccCCCCCCCCCccc-------------------------
Q 004268 162 L--KN------------------------------LKSLFLDNNHLSGPIPSTLY------------------------- 184 (764)
Q Consensus 162 l--~~------------------------------L~~L~L~~n~i~~~~~~~~~------------------------- 184 (764)
+ ++ |+.|++++|.+++..+..+.
T Consensus 171 l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~ 250 (844)
T 3j0a_A 171 LQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFH 250 (844)
T ss_dssp HHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCS
T ss_pred ccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceeccccccccccccc
Confidence 4 44 55555555544332222211
Q ss_pred -----------c--CCCccEEEecCccCcCCcccccCCccccceeeccCcccccccCccccCCCCCCEEEccCCcccCCC
Q 004268 185 -----------H--LNQLATLCLGYNKLVGPVTKEVGNMKNLDRLHLNGNNLTGSIPSTIGYLNLLDELHLSHNRLDGPI 251 (764)
Q Consensus 185 -----------~--l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 251 (764)
. .++|+.|++++|.+..+.+..|..+++|+.|+|++|++++..+..|..+++|+.|+|++|.+++..
T Consensus 251 ~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 330 (844)
T 3j0a_A 251 NIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELY 330 (844)
T ss_dssp SSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCC
T ss_pred ccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccC
Confidence 1 156777888888777777777888888888888888888888888888888888888888888777
Q ss_pred CcCCcCCCCCCeEEccCCcccCCCCccccCCCCCCeEeccCccccCCCC------------------C------------
Q 004268 252 PPTIGNLTNLIALDLSSNQLSGLLPREVGNLKYLASLSLNGNILIGPIP------------------P------------ 301 (764)
Q Consensus 252 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~------------------~------------ 301 (764)
+..|..+++|+.|+|++|.+..+.+..|.++++|+.|+|++|.+++... .
T Consensus 331 ~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~L~~L~l~~N~l~~l~~~~~~l~~L~ls~ 410 (844)
T 3j0a_A 331 SSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIHFIPSIPDIFLSGNKLVTLPKINLTANLIHLSE 410 (844)
T ss_dssp SCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCCSSCCSCSEEEEESCCCCCCCCCCTTCCEEECCS
T ss_pred HHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCcccCCCCcchhccCCCCcccccccccccceeeccc
Confidence 8888888888888888888887777788888888888888887764211 0
Q ss_pred ----------CCCCCCccceEEccCCcCccC------------------------------CChhhhcccccceeecccc
Q 004268 302 ----------TIGYLTNLTYLNLGYNRLSSS------------------------------IPPELMNCSQLLNLVLSHN 341 (764)
Q Consensus 302 ----------~~~~l~~L~~L~ls~N~l~~~------------------------------~~~~~~~l~~L~~L~ls~N 341 (764)
.+..+++|++|+|++|++++. .+..|.++++|+.|+|++|
T Consensus 411 N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N 490 (844)
T 3j0a_A 411 NRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHN 490 (844)
T ss_dssp CCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHH
T ss_pred CccccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCC
Confidence 012455666666666665532 1233556677777777777
Q ss_pred ccccCCchhcccccccceeecccccccCCCCCCCCCCCccceecCCCCccccccCCccccCccccccCCCCCCCC
Q 004268 342 SLSGSIPSEIGNLIFFRQLDLSRNFINGTIPSQLGKIPNISAVDLSKNNLSGVIPASVRRIPKLIVSENNLELEN 416 (764)
Q Consensus 342 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~n~~~~~~ 416 (764)
++++..|..|.++++|+.|+|++|+|++..+..+. ++|+.|++++|++++..|..+..+..+++++|++.|..
T Consensus 491 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~~~~L~~l~l~~Np~~C~c 563 (844)
T 3j0a_A 491 YLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDVFVSLSVLDITHNKFICEC 563 (844)
T ss_dssp HHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCCCSSCCEEEEEEECCCCSS
T ss_pred cccccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhHhCCcCEEEecCCCccccc
Confidence 77777777777788888888888888776666665 77888888888888888888888999999999987743
No 7
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=2.4e-47 Score=437.18 Aligned_cols=400 Identities=20% Similarity=0.175 Sum_probs=226.6
Q ss_pred ccccccCCCeeEEEeCCCCccccCCccccCCCCCcEEEcCCCcCcccCCccccCCCCCCEEEccCCcCcccCCcccCCCC
Q 004268 12 QLNFTCFPNLVTFRIWGTLLSGRMPSEIGALSKLEKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTGTIPSEIGSLR 91 (764)
Q Consensus 12 ~~~~~~~~~l~~L~l~~~~~~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~ 91 (764)
...|..+++|++|++++|.+++..|..|..+++|++|+|++|++++..|..|.++++|++|+|++|++++..+..|..++
T Consensus 50 ~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~ 129 (606)
T 3t6q_A 50 NTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQK 129 (606)
T ss_dssp TTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCT
T ss_pred hhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeeccccCcccCCcchhccCC
Confidence 44566667777777777777666666777777777777777777666666677777777777777777655556666777
Q ss_pred CCCEEecCCCcccccCCccCcCCCCCCEEEccCCcCcccCCccccCCCCcC--EEecccCcccccCCccccCC-------
Q 004268 92 DLLDLNLSNNILNGSIPLEFGNLKDLDQLRLQGNKLDGLIPSSIGNLTNLT--YLDLSLNQLSGRLPQEVGNL------- 162 (764)
Q Consensus 92 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~--~L~L~~n~l~~~~~~~~~~l------- 162 (764)
+|++|+|++|.++++....+.++++|++|++++|.++++.+..|..+++|+ .|++++|.++++.+..|...
T Consensus 130 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l~~~~~~~~~~~~L~~L~l 209 (606)
T 3t6q_A 130 TLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIAGIEPGAFDSAVFQSLNF 209 (606)
T ss_dssp TCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCCCEECTTTTTTCEEEEEEC
T ss_pred cccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCccCccChhHhhhcccccccc
Confidence 777777777777655444455566777777777776666666666666666 55666665554443322110
Q ss_pred --------------------------------------------CCCCeeecccCCCCCCCCCccccCCCccEEEecCcc
Q 004268 163 --------------------------------------------KNLKSLFLDNNHLSGPIPSTLYHLNQLATLCLGYNK 198 (764)
Q Consensus 163 --------------------------------------------~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~ 198 (764)
.+|+.|++++|.++++.+..|..+++|++|++++|.
T Consensus 210 ~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 289 (606)
T 3t6q_A 210 GGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATH 289 (606)
T ss_dssp TTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSC
T ss_pred CCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCccCHHHhccccCCCEEeccCCc
Confidence 023333333333333333334444555555555555
Q ss_pred CcCCcccccCCccccceeeccCcccccccCcc-------------------------ccCCCCCCEEEccCCcccCCC--
Q 004268 199 LVGPVTKEVGNMKNLDRLHLNGNNLTGSIPST-------------------------IGYLNLLDELHLSHNRLDGPI-- 251 (764)
Q Consensus 199 i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~-------------------------~~~l~~L~~L~L~~n~l~~~~-- 251 (764)
++.++ ..+..+++|++|++++|.+++..+.. +..+++|++|++++|.+.+..
T Consensus 290 l~~lp-~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 368 (606)
T 3t6q_A 290 LSELP-SGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCC 368 (606)
T ss_dssp CSCCC-SSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEES
T ss_pred cCCCC-hhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhccCcCCEEECCCCccccccCc
Confidence 44332 23444445555555555444444444 444455555555555554333
Q ss_pred CcCCcCCCCCCeEEccCCcccCCCCccccCCCCCCeEeccCccccCCCCC-CCCCCCccceEEccCCcCccCCChhhhcc
Q 004268 252 PPTIGNLTNLIALDLSSNQLSGLLPREVGNLKYLASLSLNGNILIGPIPP-TIGYLTNLTYLNLGYNRLSSSIPPELMNC 330 (764)
Q Consensus 252 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~-~~~~l~~L~~L~ls~N~l~~~~~~~~~~l 330 (764)
+..+..+++|+.|++++|.+.+..+..|..+++|+.|++++|++.+..+. .+..+++|++|++++|.+++..|..+..+
T Consensus 369 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l 448 (606)
T 3t6q_A 369 NLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGL 448 (606)
T ss_dssp TTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTC
T ss_pred chhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCC
Confidence 44455555555555555555555555555555555555555555544332 25555666666666666655555555556
Q ss_pred cccceeeccccccccC---CchhcccccccceeecccccccCCCCCCCCCCCccceecCCCCccccccCCccccCc--cc
Q 004268 331 SQLLNLVLSHNSLSGS---IPSEIGNLIFFRQLDLSRNFINGTIPSQLGKIPNISAVDLSKNNLSGVIPASVRRIP--KL 405 (764)
Q Consensus 331 ~~L~~L~ls~N~l~~~---~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~--~~ 405 (764)
++|++|++++|++++. .+..+..+++|+.|+|++|++++..|..|.++++|+.|++++|++++..|..+..++ .+
T Consensus 449 ~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~L 528 (606)
T 3t6q_A 449 PALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGIYL 528 (606)
T ss_dssp TTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSCEE
T ss_pred CCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCcccccEE
Confidence 6666666666665541 223455566666666666666655566666666666666666666665555544333 34
Q ss_pred cccCCCC
Q 004268 406 IVSENNL 412 (764)
Q Consensus 406 ~~~~n~~ 412 (764)
++++|.+
T Consensus 529 ~L~~N~l 535 (606)
T 3t6q_A 529 NLASNHI 535 (606)
T ss_dssp ECCSSCC
T ss_pred ECcCCcc
Confidence 4455554
No 8
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=1.8e-47 Score=438.20 Aligned_cols=404 Identities=22% Similarity=0.236 Sum_probs=346.0
Q ss_pred ccccccccCCCeeEEEeCCCCccccCCccccCCCCCcEEEcCCCcCcccCCccccCCCCCCEEEccCCcCcccCCcccCC
Q 004268 10 LSQLNFTCFPNLVTFRIWGTLLSGRMPSEIGALSKLEKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTGTIPSEIGS 89 (764)
Q Consensus 10 ~~~~~~~~~~~l~~L~l~~~~~~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~ 89 (764)
+....|..+++|++|++++|.+++..|..|+.+++|++|++++|.++++.+..|..+++|++|+|++|++++.....+..
T Consensus 72 ~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 151 (606)
T 3t6q_A 72 IHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFP 151 (606)
T ss_dssp ECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCC
T ss_pred eChhhccCccccCeeeCCCCcccccChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccC
Confidence 44567899999999999999999888999999999999999999999877788999999999999999998655455566
Q ss_pred CCCCCEEecCCCcccccCCccCcCCCCCC--EEEccCCcCcccCC-----------------------------------
Q 004268 90 LRDLLDLNLSNNILNGSIPLEFGNLKDLD--QLRLQGNKLDGLIP----------------------------------- 132 (764)
Q Consensus 90 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~--~L~L~~n~l~~~~~----------------------------------- 132 (764)
+++|++|+|++|.++++.+..|..+++|+ +|++++|.+.++.+
T Consensus 152 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~ 231 (606)
T 3t6q_A 152 TEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIAGIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLW 231 (606)
T ss_dssp CTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCCCEECTTTTTTCEEEEEECTTCSCHHHHHHHTTTCEEEEEE
T ss_pred CcccCEEEcccCcccccChhhhhhhcccceeEEecCCCccCccChhHhhhccccccccCCchhHHHHhhhccccchhhee
Confidence 88999999999988877777777777777 66666666654443
Q ss_pred ----------------------------------------ccccCCCCcCEEecccCcccccCCccccCCCCCCeeeccc
Q 004268 133 ----------------------------------------SSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNLKSLFLDN 172 (764)
Q Consensus 133 ----------------------------------------~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 172 (764)
..|.++++|++|++++|+++ ..|..+.++++|++|++++
T Consensus 232 ~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~ 310 (606)
T 3t6q_A 232 LGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSA 310 (606)
T ss_dssp CCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTT
T ss_pred chhhccccccccChhHhchhhcCceeEEEeecCccCccCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECcc
Confidence 34566677788888888777 4455677778888888888
Q ss_pred CCCCCCCCCccccCCCccEEEecCccCc-CCcccccCCccccceeeccCccccccc--CccccCCCCCCEEEccCCcccC
Q 004268 173 NHLSGPIPSTLYHLNQLATLCLGYNKLV-GPVTKEVGNMKNLDRLHLNGNNLTGSI--PSTIGYLNLLDELHLSHNRLDG 249 (764)
Q Consensus 173 n~i~~~~~~~~~~l~~L~~L~l~~n~i~-~~~~~~~~~l~~L~~L~L~~n~l~~~~--~~~~~~l~~L~~L~L~~n~l~~ 249 (764)
|.++++.+..+..+++|++|++++|.+. .+....+..+++|++|++++|.+++.. +..+..+++|++|++++|.+.+
T Consensus 311 n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~ 390 (606)
T 3t6q_A 311 NKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLS 390 (606)
T ss_dssp CCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEE
T ss_pred CCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCc
Confidence 8877766777778888888888888776 345556888999999999999998766 7789999999999999999998
Q ss_pred CCCcCCcCCCCCCeEEccCCcccCCCCc-cccCCCCCCeEeccCccccCCCCCCCCCCCccceEEccCCcCccC---CCh
Q 004268 250 PIPPTIGNLTNLIALDLSSNQLSGLLPR-EVGNLKYLASLSLNGNILIGPIPPTIGYLTNLTYLNLGYNRLSSS---IPP 325 (764)
Q Consensus 250 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~---~~~ 325 (764)
..+..|..+++|+.|++++|.+.+..+. .+..+++|+.|++++|.+.+..|..+..+++|++|++++|++++. .+.
T Consensus 391 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 470 (606)
T 3t6q_A 391 LKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTN 470 (606)
T ss_dssp ECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSC
T ss_pred CCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccch
Confidence 8999999999999999999999876554 489999999999999999998999999999999999999999862 346
Q ss_pred hhhcccccceeeccccccccCCchhcccccccceeecccccccCCCCCCCCCCCccceecCCCCccccccCCcc---ccC
Q 004268 326 ELMNCSQLLNLVLSHNSLSGSIPSEIGNLIFFRQLDLSRNFINGTIPSQLGKIPNISAVDLSKNNLSGVIPASV---RRI 402 (764)
Q Consensus 326 ~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~---~~~ 402 (764)
.+..+++|++|++++|++++..|..|..+++|+.|+|++|++++..|..|..+++| .|++++|++++..|..+ +.+
T Consensus 471 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L 549 (606)
T 3t6q_A 471 SLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQ 549 (606)
T ss_dssp GGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTS
T ss_pred hhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCC
Confidence 78999999999999999999989999999999999999999999999999999999 99999999999888754 578
Q ss_pred ccccccCCCCCCC
Q 004268 403 PKLIVSENNLELE 415 (764)
Q Consensus 403 ~~~~~~~n~~~~~ 415 (764)
..+++++|++.|.
T Consensus 550 ~~L~l~~N~~~c~ 562 (606)
T 3t6q_A 550 RTINLRQNPLDCT 562 (606)
T ss_dssp SEEECTTCCEECS
T ss_pred CEEeCCCCCcccc
Confidence 8999999999764
No 9
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=5.3e-49 Score=395.09 Aligned_cols=234 Identities=25% Similarity=0.367 Sum_probs=185.9
Q ss_pred hhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEEEEE
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFLI 585 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 585 (764)
.++|++.+.||+|+||+||+|++. +|+.||+|++.+.........+.+.+|++++++++||||+++++++.+++..|+|
T Consensus 12 ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv 91 (275)
T 3hyh_A 12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp --CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred eeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence 478999999999999999999864 7999999999876655555567899999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeeccccccCC
Q 004268 586 YEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLARLLHP 665 (764)
Q Consensus 586 ~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 665 (764)
|||+ +|+|.+++.+ ...+++..++.++.||+.||+||| ++||+||||||+|||+++++.+||+|||+|+....
T Consensus 92 mEy~-~g~L~~~l~~---~~~l~e~~~~~~~~qi~~al~ylH---~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~ 164 (275)
T 3hyh_A 92 IEYA-GNELFDYIVQ---RDKMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD 164 (275)
T ss_dssp EECC-CEEHHHHHHH---SCSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCTTTEEECTTCCEEECCSSCC-----
T ss_pred EeCC-CCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCChHHeEECCCCCEEEeecCCCeecCC
Confidence 9999 5799999874 346999999999999999999999 89999999999999999999999999999987653
Q ss_pred CCCCceecccccccccccccccCCC-CccchHHHHHHHHHHHHhCCCCCCccccccc---ccCCcCCCCCCCcHHHHHHH
Q 004268 666 DSSNRTLVVGTYGYIAPELAYTMAV-TEKCDVYSFGVVALEVLMGSHPTDLLSSLSS---SSGRKISQNPRLDLQCNAYL 741 (764)
Q Consensus 666 ~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~DiwslG~il~~lltg~~Pf~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 741 (764)
. ......+||+.|+|||++.+..| +.++||||+||++|+|+||+.||.+.+.... ........+..++..+.+++
T Consensus 165 ~-~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li 243 (275)
T 3hyh_A 165 G-NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLI 243 (275)
T ss_dssp -----------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTSCHHHHHHH
T ss_pred C-CccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHH
Confidence 3 23345789999999999998886 5799999999999999999999987654221 12223334556899999999
Q ss_pred hhhhccc
Q 004268 742 KNFSQGN 748 (764)
Q Consensus 742 ~~~l~~~ 748 (764)
++|++.+
T Consensus 244 ~~~L~~d 250 (275)
T 3hyh_A 244 KRMLIVN 250 (275)
T ss_dssp HHHSCSS
T ss_pred HHHccCC
Confidence 9999988
No 10
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=1.9e-48 Score=412.45 Aligned_cols=232 Identities=25% Similarity=0.416 Sum_probs=204.6
Q ss_pred hhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEEEEE
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFLI 585 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 585 (764)
.+.|++.+.||+|+||+||+|+++ +|+.||||++....... .+.+.+|++++++++|||||++++++.+++.+|+|
T Consensus 150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~---~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iV 226 (423)
T 4fie_A 150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR---RELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVV 226 (423)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSS---GGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhH---HHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEE
Confidence 357999999999999999999865 79999999997655443 25688999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeeccccccCC
Q 004268 586 YEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLARLLHP 665 (764)
Q Consensus 586 ~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 665 (764)
||||+||+|.++++. ..+++.+++.|+.||+.||+||| ++|||||||||+|||++.+|.+||+|||+|+.+..
T Consensus 227 mEy~~gG~L~~~i~~----~~l~e~~~~~~~~qil~aL~ylH---~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~ 299 (423)
T 4fie_A 227 MEFLEGGALTDIVTH----TRMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK 299 (423)
T ss_dssp EECCTTEEHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSTTTEEECTTCCEEECCCTTCEECCS
T ss_pred EeCCCCCcHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHH---HCCeecccCCHHHEEEcCCCCEEEecCccceECCC
Confidence 999999999999963 35899999999999999999999 89999999999999999999999999999998766
Q ss_pred CCCCceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCccccccccc------CCcCCCCCCCcHHHHH
Q 004268 666 DSSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSSSS------GRKISQNPRLDLQCNA 739 (764)
Q Consensus 666 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~~~------~~~~~~~~~~~~~~~~ 739 (764)
........+||+.|||||++.+..|+.++||||+||++|||++|++||.+.+..+... .........++..+.+
T Consensus 300 ~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~d 379 (423)
T 4fie_A 300 EVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKG 379 (423)
T ss_dssp SCCCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSCTTSSCHHHHH
T ss_pred CCccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCcccccCCHHHHH
Confidence 6566667899999999999999999999999999999999999999998766533211 1123344568899999
Q ss_pred HHhhhhccc
Q 004268 740 YLKNFSQGN 748 (764)
Q Consensus 740 ~~~~~l~~~ 748 (764)
++++||+.+
T Consensus 380 li~~~L~~d 388 (423)
T 4fie_A 380 FLDRLLVRD 388 (423)
T ss_dssp HHHHHSCSS
T ss_pred HHHHHcCCC
Confidence 999999988
No 11
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=3e-47 Score=436.42 Aligned_cols=409 Identities=20% Similarity=0.121 Sum_probs=272.5
Q ss_pred CcccccccccccCCCeeEEEeCCCCccccCCccccCCCCCcEEEcCCCcCcccCCccccCCCCCCEEEccCCcCcccCCc
Q 004268 6 TGAELSQLNFTCFPNLVTFRIWGTLLSGRMPSEIGALSKLEKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTGTIPS 85 (764)
Q Consensus 6 ~~~~~~~~~~~~~~~l~~L~l~~~~~~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~ 85 (764)
+|..+...+-.-.++++.|++++|.+++..+..|..+++|++|+|++|.++++.|.+|.++++|++|+|++|.+++..|.
T Consensus 19 ~~~~l~~ip~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~ 98 (606)
T 3vq2_A 19 MDQKLSKVPDDIPSSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPG 98 (606)
T ss_dssp TTSCCSSCCTTSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTT
T ss_pred cCCCcccCCCCCCCCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChh
Confidence 34444444433345678888888888777777777888888888888888777777777788888888888887776677
Q ss_pred ccCCCCCCCEEecCCCcccccCCccCcCCCCCCEEEccCCcCccc-CCccccCCCCcCEEecccCcccccCCccccCCCC
Q 004268 86 EIGSLRDLLDLNLSNNILNGSIPLEFGNLKDLDQLRLQGNKLDGL-IPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKN 164 (764)
Q Consensus 86 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 164 (764)
+|+++++|++|+|++|.++++.+..|+++++|++|++++|.+.++ .|..|.++++|++|+|++|+++++.+..|..+++
T Consensus 99 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~ 178 (606)
T 3vq2_A 99 SFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRE 178 (606)
T ss_dssp SSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHH
T ss_pred hcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhc
Confidence 788888888888888887766667777788888888888877753 3677777788888888887777766665554443
Q ss_pred CC----eeecccCCCCCCCCCcc---------------------------------------------------------
Q 004268 165 LK----SLFLDNNHLSGPIPSTL--------------------------------------------------------- 183 (764)
Q Consensus 165 L~----~L~L~~n~i~~~~~~~~--------------------------------------------------------- 183 (764)
|+ +|++++|.++.+.+..+
T Consensus 179 L~~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l 258 (606)
T 3vq2_A 179 NPQVNLSLDMSLNPIDFIQDQAFQGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGL 258 (606)
T ss_dssp CTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTG
T ss_pred cccccceeeccCCCcceeCcccccCceeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhh
Confidence 32 45555554443332222
Q ss_pred ---------------------------------------------ccCCCccEEEecCccCcCCc---------------
Q 004268 184 ---------------------------------------------YHLNQLATLCLGYNKLVGPV--------------- 203 (764)
Q Consensus 184 ---------------------------------------------~~l~~L~~L~l~~n~i~~~~--------------- 203 (764)
..+++|+.|++++|.+..++
T Consensus 259 ~~l~l~~l~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~l~~l~~~~~L~~L~l~~n~l~~lp~~~l~~L~~L~l~~n 338 (606)
T 3vq2_A 259 CDVTIDEFRLTYTNDFSDDIVKFHCLANVSAMSLAGVSIKYLEDVPKHFKWQSLSIIRCQLKQFPTLDLPFLKSLTLTMN 338 (606)
T ss_dssp GGSEEEEEEECCCTTCCGGGGSCGGGTTCSEEEEESCCCCCCCCCCTTCCCSEEEEESCCCSSCCCCCCSSCCEEEEESC
T ss_pred hhccHhheeccccccccccccccccCCCCCEEEecCccchhhhhccccccCCEEEcccccCcccccCCCCccceeeccCC
Confidence 22233334444444332221
Q ss_pred ----ccccCCccccceeeccCccccccc--CccccCCCCCCEEEccCCcccCCCCcCCcCCCCCCeEEccCCcccCCCC-
Q 004268 204 ----TKEVGNMKNLDRLHLNGNNLTGSI--PSTIGYLNLLDELHLSHNRLDGPIPPTIGNLTNLIALDLSSNQLSGLLP- 276 (764)
Q Consensus 204 ----~~~~~~l~~L~~L~L~~n~l~~~~--~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~- 276 (764)
...+..+++|++|++++|.+++.. +..+..+++|+.|++++|.+.+ .|..+..+++|+.|++++|.+.+..+
T Consensus 339 ~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~ 417 (606)
T 3vq2_A 339 KGSISFKKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEF 417 (606)
T ss_dssp SSCEECCCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTT
T ss_pred cCccchhhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccCh
Confidence 112334555666666666665442 5566666777777777777664 34566777777777777777766655
Q ss_pred ccccCCCCCCeEeccCccccCCCCCCCCCCCccceEEccCCcCcc-CCChhhhcccccceeeccccccccCCchhccccc
Q 004268 277 REVGNLKYLASLSLNGNILIGPIPPTIGYLTNLTYLNLGYNRLSS-SIPPELMNCSQLLNLVLSHNSLSGSIPSEIGNLI 355 (764)
Q Consensus 277 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~-~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~ 355 (764)
..+..+++|+.|++++|.+.+..|..+..+++|++|++++|++++ ..|..+..+++|++|+|++|++++..|..+.+++
T Consensus 418 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~ 497 (606)
T 3vq2_A 418 SAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLH 497 (606)
T ss_dssp TTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCT
T ss_pred hhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccc
Confidence 567777777777777777777677777777777777777777775 3566677777777777777777776677777777
Q ss_pred ccceeecccccccCCCCCCCCCCCccceecCCCCccccccCC--ccc-cCccccccCCCCCCC
Q 004268 356 FFRQLDLSRNFINGTIPSQLGKIPNISAVDLSKNNLSGVIPA--SVR-RIPKLIVSENNLELE 415 (764)
Q Consensus 356 ~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~--~~~-~~~~~~~~~n~~~~~ 415 (764)
+|+.|+|++|++++..|..|..+++|+.|++++|+++..++. .++ .+..+++++|++.|.
T Consensus 498 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~p~~~~~l~~~L~~l~l~~N~~~c~ 560 (606)
T 3vq2_A 498 RLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIETSKGILQHFPKSLAFFNLTNNSVACI 560 (606)
T ss_dssp TCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCCCEESCGGGSCTTCCEEECCSCCCCCS
T ss_pred cCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCcccCHhHhhhcccCcEEEccCCCcccC
Confidence 777777777777776677777777777777777777744433 112 356677777777553
No 12
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=2.1e-49 Score=403.62 Aligned_cols=238 Identities=25% Similarity=0.351 Sum_probs=196.9
Q ss_pred hcCCcceeeeecCceeEEEEEEC----CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEEE
Q 004268 508 EDFHIKYCIGTGGYGSVYRAQLS----SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCMF 583 (764)
Q Consensus 508 ~~y~~~~~ig~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 583 (764)
++|++.+.||+|+||+||+|+.. +++.||+|++.+....... ..++.+|++++++++|||||++++++.+++.+|
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~-~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ 102 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRD-RVRTKMERDILVEVNHPFIVKLHYAFQTEGKLY 102 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEE-CC------CCCCCCCCTTEECEEEEEEETTEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHH-HHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEE
Confidence 67999999999999999999752 5789999999764432211 246778999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeecccccc
Q 004268 584 LIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLARLL 663 (764)
Q Consensus 584 lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~ 663 (764)
+|||||+||+|.+++.+ ...+++..++.++.||+.||+||| ++||+||||||+|||++++|.+||+|||+|+..
T Consensus 103 ivmEy~~gg~L~~~l~~---~~~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~ 176 (304)
T 3ubd_A 103 LILDFLRGGDLFTRLSK---EVMFTEEDVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKES 176 (304)
T ss_dssp EEECCCTTCEEHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECTTSCEEEESSEEEEC-
T ss_pred EEEEcCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHeEEcCCCCEEecccccceec
Confidence 99999999999999974 446999999999999999999999 899999999999999999999999999999876
Q ss_pred CCCCCCceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCccccccc---ccCCcCCCCCCCcHHHHHH
Q 004268 664 HPDSSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSS---SSGRKISQNPRLDLQCNAY 740 (764)
Q Consensus 664 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 740 (764)
..........+||+.|||||++.+..|+.++||||+||++|||+||++||.+.+..+. ........+..++.++.++
T Consensus 177 ~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~p~~~s~~~~~l 256 (304)
T 3ubd_A 177 IDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFLSPEAQSL 256 (304)
T ss_dssp ----CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHH
T ss_pred cCCCccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHHHHcCCCCCCCcCCHHHHHH
Confidence 5544455567899999999999999999999999999999999999999987665332 1223344456689999999
Q ss_pred HhhhhccchhhH
Q 004268 741 LKNFSQGNHRWE 752 (764)
Q Consensus 741 ~~~~l~~~~~~~ 752 (764)
+++||+.++.-|
T Consensus 257 i~~~L~~dP~~R 268 (304)
T 3ubd_A 257 LRMLFKRNPANR 268 (304)
T ss_dssp HHHHTCSSGGGS
T ss_pred HHHHcccCHHHC
Confidence 999999884443
No 13
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=9.6e-48 Score=396.05 Aligned_cols=231 Identities=23% Similarity=0.274 Sum_probs=195.7
Q ss_pred hhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEEEEE
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFLI 585 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 585 (764)
.+.|++.+.||+|+||+||+|+++ +|+.||||++...... .+|+.++++++|||||++++++.+++.+|+|
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~~--------~~E~~il~~l~HpnIV~l~~~~~~~~~~~iv 128 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR--------VEELVACAGLSSPRIVPLYGAVREGPWVNIF 128 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCC--------THHHHTTTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHhH--------HHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 457888999999999999999865 7999999999765432 3699999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCC-CEEEeeeccccccC
Q 004268 586 YEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNL-EAFVADFGLARLLH 664 (764)
Q Consensus 586 ~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~-~~kl~Dfg~~~~~~ 664 (764)
||||+||+|.+++++ ...+++..++.++.||+.||+||| ++|||||||||+|||++.+| .+||+|||+|+...
T Consensus 129 mEy~~gg~L~~~l~~---~~~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~ 202 (336)
T 4g3f_A 129 MELLEGGSLGQLIKQ---MGCLPEDRALYYLGQALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQ 202 (336)
T ss_dssp ECCCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC-
T ss_pred EeccCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH---HCCceecccCHHHEEEeCCCCEEEEeeCCCCeEcc
Confidence 999999999999973 346999999999999999999999 99999999999999999887 69999999998775
Q ss_pred CCCCC-----ceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccccccccCC------cCCCCCCC
Q 004268 665 PDSSN-----RTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSSSSGR------KISQNPRL 733 (764)
Q Consensus 665 ~~~~~-----~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~~~~~------~~~~~~~~ 733 (764)
..... ....+||+.|||||++.+..|+.++||||+||++|||+||++||.+.+........ ....++.+
T Consensus 203 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 282 (336)
T 4g3f_A 203 PDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIREIPPSC 282 (336)
T ss_dssp -----------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHSCCGGGGSCTTS
T ss_pred CCCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHcCCCCchhcCccC
Confidence 43221 12357999999999999999999999999999999999999999876653322111 11235678
Q ss_pred cHHHHHHHhhhhccchhh
Q 004268 734 DLQCNAYLKNFSQGNHRW 751 (764)
Q Consensus 734 ~~~~~~~~~~~l~~~~~~ 751 (764)
+..+.+++++||+.++.-
T Consensus 283 s~~~~~li~~~L~~dP~~ 300 (336)
T 4g3f_A 283 APLTAQAIQEGLRKEPVH 300 (336)
T ss_dssp CHHHHHHHHHHTCSSGGG
T ss_pred CHHHHHHHHHHccCCHhH
Confidence 899999999999988433
No 14
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=4.8e-47 Score=384.48 Aligned_cols=230 Identities=25% Similarity=0.404 Sum_probs=191.0
Q ss_pred CCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEee----CCEEEE
Q 004268 510 FHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLH----NKCMFL 584 (764)
Q Consensus 510 y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~----~~~~~l 584 (764)
|++.+.||+|+||+||+|.+. +++.||+|++....... ...+.+.+|++++++++|||||++++++.+ ++.+|+
T Consensus 28 ~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~-~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~l 106 (290)
T 3fpq_A 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTK-SERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 106 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCH-HHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEE
T ss_pred EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCH-HHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEE
Confidence 367788999999999999865 78999999997655433 345789999999999999999999999865 356899
Q ss_pred EEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCC--cEEcCCCCCCeeecC-CCCEEEeeecccc
Q 004268 585 IYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPS--IVHRDISSNNILLNS-NLEAFVADFGLAR 661 (764)
Q Consensus 585 v~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~--iiH~Dlkp~NIll~~-~~~~kl~Dfg~~~ 661 (764)
|||||+||+|.+++.+ ...+++..++.|+.||+.||+||| ++| ||||||||+|||+++ ++.+||+|||+|+
T Consensus 107 vmEy~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~ylH---~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~ 180 (290)
T 3fpq_A 107 VTELMTSGTLKTYLKR---FKVMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLAT 180 (290)
T ss_dssp EEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGG
T ss_pred EEeCCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH---HCCCCEEecccChhheeEECCCCCEEEEeCcCCE
Confidence 9999999999999974 456899999999999999999999 778 999999999999984 7999999999998
Q ss_pred ccCCCCCCceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCccccccccc-----C-CcCCCCCCCcH
Q 004268 662 LLHPDSSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSSSS-----G-RKISQNPRLDL 735 (764)
Q Consensus 662 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~~~-----~-~~~~~~~~~~~ 735 (764)
... .......+||+.|||||++.+ .|+.++||||+||++|||+||++||.+........ . .........++
T Consensus 181 ~~~--~~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 257 (290)
T 3fpq_A 181 LKR--ASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIP 257 (290)
T ss_dssp GCC--TTSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCH
T ss_pred eCC--CCccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHcCCCCCCCCccCCH
Confidence 643 234456789999999999875 69999999999999999999999997654422111 1 11112334567
Q ss_pred HHHHHHhhhhccch
Q 004268 736 QCNAYLKNFSQGNH 749 (764)
Q Consensus 736 ~~~~~~~~~l~~~~ 749 (764)
++.+++++||+.++
T Consensus 258 ~~~~li~~~L~~dP 271 (290)
T 3fpq_A 258 EVKEIIEGCIRQNK 271 (290)
T ss_dssp HHHHHHHHHSCSSG
T ss_pred HHHHHHHHHccCCh
Confidence 89999999999883
No 15
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=1.6e-45 Score=427.83 Aligned_cols=196 Identities=21% Similarity=0.229 Sum_probs=132.8
Q ss_pred cccccccCccccCCCCCCEEEccCCcccCCCC-cCCcCCCCCCeEEccCCcccC--------------------------
Q 004268 221 NNLTGSIPSTIGYLNLLDELHLSHNRLDGPIP-PTIGNLTNLIALDLSSNQLSG-------------------------- 273 (764)
Q Consensus 221 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~n~l~~-------------------------- 273 (764)
|+++++.+..|..+++|+.|+|++|.+.+..+ ..|.++++|+.|++++|++.+
T Consensus 391 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~ 470 (680)
T 1ziw_A 391 NKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVD 470 (680)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTT
T ss_pred CCCCeEChhhhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccc
Confidence 33444444555555556666666665543222 345555555555555554433
Q ss_pred CCCccccCCCCCCeEeccCccccCCCCCCCCCCCccceEEccCCcCccCCC--------hhhhcccccceeecccccccc
Q 004268 274 LLPREVGNLKYLASLSLNGNILIGPIPPTIGYLTNLTYLNLGYNRLSSSIP--------PELMNCSQLLNLVLSHNSLSG 345 (764)
Q Consensus 274 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~--------~~~~~l~~L~~L~ls~N~l~~ 345 (764)
..|..|.++++|+.|++++|+++++.+..+..+++|++|+|++|++++..+ ..|.++++|+.|+|++|+++.
T Consensus 471 ~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~ 550 (680)
T 1ziw_A 471 SSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDE 550 (680)
T ss_dssp CSSCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCC
T ss_pred cCCcccccCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCC
Confidence 345666777777777777777777766777777777888888777774321 236777788888888888875
Q ss_pred CCchhcccccccceeecccccccCCCCCCCCCCCccceecCCCCccccccCC----ccccCccccccCCCCCCCC
Q 004268 346 SIPSEIGNLIFFRQLDLSRNFINGTIPSQLGKIPNISAVDLSKNNLSGVIPA----SVRRIPKLIVSENNLELEN 416 (764)
Q Consensus 346 ~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~----~~~~~~~~~~~~n~~~~~~ 416 (764)
..+..|.++++|+.|+|++|++++..+..|..+++|+.|++++|++++..|. .++.+..+++++|++.|..
T Consensus 551 i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c 625 (680)
T 1ziw_A 551 IPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTC 625 (680)
T ss_dssp CCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCC
T ss_pred CCHHHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCC
Confidence 5555678888888888888888877777778888888888888888877665 3467788888888887654
No 16
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=2.6e-45 Score=426.15 Aligned_cols=404 Identities=24% Similarity=0.247 Sum_probs=292.1
Q ss_pred ccccccccCCCeeEEEeCCCCccccCCccccCCCCCcEEEcCCCcCcccCCccccCCCCCCEEEccCCcCcccCCcccCC
Q 004268 10 LSQLNFTCFPNLVTFRIWGTLLSGRMPSEIGALSKLEKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTGTIPSEIGS 89 (764)
Q Consensus 10 ~~~~~~~~~~~l~~L~l~~~~~~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~ 89 (764)
++...|..+++|++|++++|.+++..|..|..+++|++|+|++|.++++.+.+|.++++|++|+|++|++++..+..|+.
T Consensus 40 ~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 119 (680)
T 1ziw_A 40 LPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVK 119 (680)
T ss_dssp CCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTT
T ss_pred cCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEECCCCccCccChhHccc
Confidence 34455777788888888888888777777888888888888888887666667888888888888888887666677888
Q ss_pred CCCCCEEecCCCcccccCCccCcCCCCCCEEEccCCcCcccCCcccc--CCCCcCEEecccCcccccCCc----------
Q 004268 90 LRDLLDLNLSNNILNGSIPLEFGNLKDLDQLRLQGNKLDGLIPSSIG--NLTNLTYLDLSLNQLSGRLPQ---------- 157 (764)
Q Consensus 90 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~--~l~~L~~L~L~~n~l~~~~~~---------- 157 (764)
+++|++|+|++|.+++..+..|.++++|++|++++|.++++.+..+. .+++|++|++++|.++++.+.
T Consensus 120 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 199 (680)
T 1ziw_A 120 QKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFG 199 (680)
T ss_dssp CTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCCCCBCTTGGGGSSEECE
T ss_pred cCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCcccccChhhhhhhhhhhh
Confidence 88888888888888777777777777777777777777665554432 234455555554444433322
Q ss_pred -----------------------------------------cccCCC--CCCeeecccCCCCCCCCCccccCCCccEEEe
Q 004268 158 -----------------------------------------EVGNLK--NLKSLFLDNNHLSGPIPSTLYHLNQLATLCL 194 (764)
Q Consensus 158 -----------------------------------------~~~~l~--~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l 194 (764)
.|.+++ +|+.|++++|.++++.+..|..+++|++|++
T Consensus 200 L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 279 (680)
T 1ziw_A 200 LFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFL 279 (680)
T ss_dssp EECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred hhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCccCcccccCcccccEeeC
Confidence 222222 2666666666666555566666666666666
Q ss_pred cCccCcCCccc---------------------------------ccCCccccceeeccCcccccccCccccCCCCCCEEE
Q 004268 195 GYNKLVGPVTK---------------------------------EVGNMKNLDRLHLNGNNLTGSIPSTIGYLNLLDELH 241 (764)
Q Consensus 195 ~~n~i~~~~~~---------------------------------~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 241 (764)
++|.+..+.+. .|..+++|++|++++|.+++..+..|..+++|++|+
T Consensus 280 ~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 359 (680)
T 1ziw_A 280 EYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLS 359 (680)
T ss_dssp CSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCCCCTTTTTTCTTCCEEE
T ss_pred CCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccCCCChhHhccccCCcEEE
Confidence 66655433221 455567777777778888777666666666555555
Q ss_pred c----------------------------cCCcccCCCCcCCcCCCCCCeEEccCCcccCCC-CccccCCCCCCeEeccC
Q 004268 242 L----------------------------SHNRLDGPIPPTIGNLTNLIALDLSSNQLSGLL-PREVGNLKYLASLSLNG 292 (764)
Q Consensus 242 L----------------------------~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~-~~~~~~l~~L~~L~l~~ 292 (764)
+ ++|.++++.+.+|..+++|+.|+|++|.+.+.. +..|.++++|+.|++++
T Consensus 360 Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~ 439 (680)
T 1ziw_A 360 LSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSY 439 (680)
T ss_dssp CTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCS
T ss_pred CCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCC
Confidence 5 555666667788999999999999999997644 47899999999999999
Q ss_pred ccccCCCCCCCCCCCccceEEccCCcCc--cCCChhhhcccccceeeccccccccCCchhcccccccceeecccccccCC
Q 004268 293 NILIGPIPPTIGYLTNLTYLNLGYNRLS--SSIPPELMNCSQLLNLVLSHNSLSGSIPSEIGNLIFFRQLDLSRNFINGT 370 (764)
Q Consensus 293 n~l~~~~~~~~~~l~~L~~L~ls~N~l~--~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 370 (764)
|++.+..+..|..+++|+.|++++|.++ +..|..|.++++|+.|+|++|++++..+..|.++++|+.|+|++|++++.
T Consensus 440 n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~ 519 (680)
T 1ziw_A 440 NKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARL 519 (680)
T ss_dssp CSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGG
T ss_pred CCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCcccc
Confidence 9998888888888888888888888876 35677788888888888888888877777788888888888888888754
Q ss_pred CC--------CCCCCCCccceecCCCCccccccCCcc---ccCccccccCCCCC
Q 004268 371 IP--------SQLGKIPNISAVDLSKNNLSGVIPASV---RRIPKLIVSENNLE 413 (764)
Q Consensus 371 ~~--------~~~~~l~~L~~l~l~~N~l~~~~~~~~---~~~~~~~~~~n~~~ 413 (764)
.+ ..|.++++|+.|++++|+++...+..| +.+..+++++|.+.
T Consensus 520 ~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~ 573 (680)
T 1ziw_A 520 WKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLN 573 (680)
T ss_dssp GSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred chhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCC
Confidence 22 236777888888888888886555444 46677778888775
No 17
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=3.2e-47 Score=389.04 Aligned_cols=238 Identities=28% Similarity=0.459 Sum_probs=199.5
Q ss_pred hhcCCcceeeeecCceeEEEEEEC------CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCC
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLS------SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNK 580 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~ 580 (764)
.++|.+.+.||+|+||+||+|++. +++.||||++.... ....+++.+|++++++++|||||++++++.+++
T Consensus 12 r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~---~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~ 88 (299)
T 4asz_A 12 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS---DNARKDFHREAELLTNLQHEHIVKFYGVCVEGD 88 (299)
T ss_dssp GGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCC---HHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS
T ss_pred HHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCC---hHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCC
Confidence 367889999999999999999753 47789999997542 344578999999999999999999999999999
Q ss_pred EEEEEEEecCCCCHHHHHhcCc----------cccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCC
Q 004268 581 CMFLIYEYMERGSLFCVLRNDV----------EAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNL 650 (764)
Q Consensus 581 ~~~lv~e~~~~~~L~~~l~~~~----------~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~ 650 (764)
..|+|||||++|+|.++++... ....+++.++..|+.||+.||+||| +++||||||||+|||+++++
T Consensus 89 ~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDlKp~NILl~~~~ 165 (299)
T 4asz_A 89 PLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLA---SQHFVHRDLATRNCLVGENL 165 (299)
T ss_dssp SEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGG
T ss_pred EEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCccCHhhEEECCCC
Confidence 9999999999999999997532 2346999999999999999999999 89999999999999999999
Q ss_pred CEEEeeeccccccCCCCCCc--eecccccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccccccc----c
Q 004268 651 EAFVADFGLARLLHPDSSNR--TLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLM-GSHPTDLLSSLSSS----S 723 (764)
Q Consensus 651 ~~kl~Dfg~~~~~~~~~~~~--~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~llt-g~~Pf~~~~~~~~~----~ 723 (764)
.+||+|||+|+......... ....||+.|||||++.+..|+.++|||||||++|||+| |+.||.+.+..+.. .
T Consensus 166 ~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~ 245 (299)
T 4asz_A 166 LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQ 245 (299)
T ss_dssp CEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHH
T ss_pred cEEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHc
Confidence 99999999998764332221 22468999999999999999999999999999999998 99999987653321 1
Q ss_pred CCcCCCCCCCcHHHHHHHhhhhccchh
Q 004268 724 GRKISQNPRLDLQCNAYLKNFSQGNHR 750 (764)
Q Consensus 724 ~~~~~~~~~~~~~~~~~~~~~l~~~~~ 750 (764)
......++..+..+.+++.+||+.++.
T Consensus 246 ~~~~~~p~~~~~~~~~li~~cl~~dP~ 272 (299)
T 4asz_A 246 GRVLQRPRTCPQEVYELMLGCWQREPH 272 (299)
T ss_dssp TCCCCCCTTCCHHHHHHHHHHTCSSGG
T ss_pred CCCCCCCccchHHHHHHHHHHcCCChh
Confidence 223344556788999999999998843
No 18
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=1.5e-46 Score=429.89 Aligned_cols=392 Identities=21% Similarity=0.299 Sum_probs=349.8
Q ss_pred CCeeEEEeCCCCccccCCccccCCCCCcEEEcCCCcC-------------------------------------------
Q 004268 19 PNLVTFRIWGTLLSGRMPSEIGALSKLEKLVLSHNSL------------------------------------------- 55 (764)
Q Consensus 19 ~~l~~L~l~~~~~~~~~~~~~~~l~~L~~L~Ls~n~i------------------------------------------- 55 (764)
-.++.|+|+++++.|.+|++++.+++|++|+|++|.+
T Consensus 81 ~~V~~L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~ 160 (636)
T 4eco_A 81 GRVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSD 160 (636)
T ss_dssp CCEEEEECTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCH
T ss_pred CCEEEEEecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHH
Confidence 3699999999999999999999999999999999843
Q ss_pred -----------------------------------cccCCccccCCCCCCEEEccCCcCccc-----------------C
Q 004268 56 -----------------------------------TGRIPSEIGALSRLKVLDLSYNRLTGT-----------------I 83 (764)
Q Consensus 56 -----------------------------------~~~~~~~~~~l~~L~~L~L~~n~i~~~-----------------~ 83 (764)
++ +|..|.++++|++|+|++|.+++. +
T Consensus 161 ~~~~l~~~~l~~~~~~~~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~i 239 (636)
T 4eco_A 161 LIKDCINSDPQQKSIKKSSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYK 239 (636)
T ss_dssp HHHHHHHHCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHT
T ss_pred HHHHHhhcCccccccccccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccC
Confidence 34 678899999999999999999975 8
Q ss_pred CcccC--CCCCCCEEecCCCcccccCCccCcCCCCCCEEEccCCc-Ccc-cCCccccCC------CCcCEEecccCcccc
Q 004268 84 PSEIG--SLRDLLDLNLSNNILNGSIPLEFGNLKDLDQLRLQGNK-LDG-LIPSSIGNL------TNLTYLDLSLNQLSG 153 (764)
Q Consensus 84 ~~~~~--~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~-l~~-~~~~~~~~l------~~L~~L~L~~n~l~~ 153 (764)
|..++ .+++|++|+|++|.+.+..|..|.++++|++|+|++|+ +++ ..|..+..+ ++|++|+|++|+++
T Consensus 240 p~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~- 318 (636)
T 4eco_A 240 TEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK- 318 (636)
T ss_dssp TSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-
T ss_pred chhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-
Confidence 99999 99999999999999999999999999999999999998 987 677777776 99999999999999
Q ss_pred cCCc--cccCCCCCCeeecccCCCCCCCCCccccCCCccEEEecCccCcCCcccccCCccc-cceeeccCcccccccCcc
Q 004268 154 RLPQ--EVGNLKNLKSLFLDNNHLSGPIPSTLYHLNQLATLCLGYNKLVGPVTKEVGNMKN-LDRLHLNGNNLTGSIPST 230 (764)
Q Consensus 154 ~~~~--~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~-L~~L~L~~n~l~~~~~~~ 230 (764)
..|. .|.++++|++|++++|.+++..+ .+..+++|+.|++++|++..+ +..+..+++ |++|++++|.++ ..|..
T Consensus 319 ~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~~l-p~~l~~l~~~L~~L~Ls~N~l~-~lp~~ 395 (636)
T 4eco_A 319 TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQITEI-PANFCGFTEQVENLSFAHNKLK-YIPNI 395 (636)
T ss_dssp SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEEEC-CTTSEEECTTCCEEECCSSCCS-SCCSC
T ss_pred ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccccc-cHhhhhhcccCcEEEccCCcCc-ccchh
Confidence 5666 89999999999999999996566 899999999999999999954 455888999 999999999999 66777
Q ss_pred ccCCC--CCCEEEccCCcccCCCCcCCc-------CCCCCCeEEccCCcccCCCCccccCCCCCCeEeccCccccCCCCC
Q 004268 231 IGYLN--LLDELHLSHNRLDGPIPPTIG-------NLTNLIALDLSSNQLSGLLPREVGNLKYLASLSLNGNILIGPIPP 301 (764)
Q Consensus 231 ~~~l~--~L~~L~L~~n~l~~~~~~~~~-------~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 301 (764)
+..++ +|+.|++++|.+.+..|..+. .+++|+.|+|++|.++.+.+..+..+++|+.|+|++|++..+.+.
T Consensus 396 ~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~~i~~~ 475 (636)
T 4eco_A 396 FDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKN 475 (636)
T ss_dssp CCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCSBCCSS
T ss_pred hhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCCCcCHH
Confidence 77654 899999999999998888888 888999999999999977777788899999999999999955555
Q ss_pred CCCCCC-------ccceEEccCCcCccCCChhhh--cccccceeeccccccccCCchhcccccccceeec------cccc
Q 004268 302 TIGYLT-------NLTYLNLGYNRLSSSIPPELM--NCSQLLNLVLSHNSLSGSIPSEIGNLIFFRQLDL------SRNF 366 (764)
Q Consensus 302 ~~~~l~-------~L~~L~ls~N~l~~~~~~~~~--~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l------~~N~ 366 (764)
.+.... +|++|+|++|+++ .+|..+. .+++|++|+|++|++++ +|..+..+++|+.|+| ++|+
T Consensus 476 ~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~ 553 (636)
T 4eco_A 476 SLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNR 553 (636)
T ss_dssp SSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCB
T ss_pred HhccccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCcccccCc
Confidence 554443 9999999999999 6778786 99999999999999996 8889999999999999 5688
Q ss_pred ccCCCCCCCCCCCccceecCCCCccccccCCccccCccccccCCCCCCCCC
Q 004268 367 INGTIPSQLGKIPNISAVDLSKNNLSGVIPASVRRIPKLIVSENNLELENS 417 (764)
Q Consensus 367 l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~n~~~~~~~ 417 (764)
+.+.+|..+..+++|+.|++++|+++.++....+.+..+++++|++.+-+.
T Consensus 554 l~~~~p~~l~~l~~L~~L~Ls~N~l~~ip~~~~~~L~~L~Ls~N~l~~~~~ 604 (636)
T 4eco_A 554 TLREWPEGITLCPSLTQLQIGSNDIRKVNEKITPNISVLDIKDNPNISIDL 604 (636)
T ss_dssp CCCCCCTTGGGCSSCCEEECCSSCCCBCCSCCCTTCCEEECCSCTTCEEEC
T ss_pred ccccChHHHhcCCCCCEEECCCCcCCccCHhHhCcCCEEECcCCCCccccH
Confidence 888999999999999999999999965544466899999999999976543
No 19
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=7e-46 Score=425.06 Aligned_cols=386 Identities=23% Similarity=0.221 Sum_probs=329.6
Q ss_pred ccccccccCCCeeEEEeCCCCccccCCccccCCCCCcEEEcCCCcCcccCCccccCCCCCCEEEccCCcCcccCCcccCC
Q 004268 10 LSQLNFTCFPNLVTFRIWGTLLSGRMPSEIGALSKLEKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTGTIPSEIGS 89 (764)
Q Consensus 10 ~~~~~~~~~~~l~~L~l~~~~~~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~ 89 (764)
+....|.++++|++|++++|.+++..|..|..+++|++|+|++|.+++..|..|.++++|++|+|++|.+++..+..|+.
T Consensus 47 ~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 126 (606)
T 3vq2_A 47 LKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQ 126 (606)
T ss_dssp ECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTT
T ss_pred eChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEccCCccccccccccCC
Confidence 44557899999999999999999988999999999999999999999888999999999999999999999777788999
Q ss_pred CCCCCEEecCCCccccc-CCccCcCCCCCCEEEccCCcCcccCCccccCCCCcC----EEecccCcccccCCcc------
Q 004268 90 LRDLLDLNLSNNILNGS-IPLEFGNLKDLDQLRLQGNKLDGLIPSSIGNLTNLT----YLDLSLNQLSGRLPQE------ 158 (764)
Q Consensus 90 l~~L~~L~L~~n~l~~~-~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~----~L~L~~n~l~~~~~~~------ 158 (764)
+++|++|+|++|.++++ .|..|+++++|++|++++|+++++.+..|..+++|+ +|++++|.++.+.+..
T Consensus 127 l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~~L 206 (606)
T 3vq2_A 127 LITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGIKL 206 (606)
T ss_dssp CTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTCCCCEECTTTTTTCEE
T ss_pred CCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccCCCcceeCcccccCcee
Confidence 99999999999999864 488899999999999999999988877776655443 4555555554333322
Q ss_pred --------------------------------------------------------------------------------
Q 004268 159 -------------------------------------------------------------------------------- 158 (764)
Q Consensus 159 -------------------------------------------------------------------------------- 158 (764)
T Consensus 207 ~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~l~~ 286 (606)
T 3vq2_A 207 HELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVKFHCLAN 286 (606)
T ss_dssp EEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECCCTTCCGGGGSCGGGTT
T ss_pred eeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheeccccccccccccccccCCC
Confidence
Q ss_pred ----------------ccCCCCCCeeecccCCCCCCC-------------------CCccccCCCccEEEecCccCcCCc
Q 004268 159 ----------------VGNLKNLKSLFLDNNHLSGPI-------------------PSTLYHLNQLATLCLGYNKLVGPV 203 (764)
Q Consensus 159 ----------------~~~l~~L~~L~L~~n~i~~~~-------------------~~~~~~l~~L~~L~l~~n~i~~~~ 203 (764)
+..+++|++|++++|.+..+. ...+..+++|+.|++++|.+....
T Consensus 287 L~~L~l~~~~~~~l~~l~~~~~L~~L~l~~n~l~~lp~~~l~~L~~L~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~~~ 366 (606)
T 3vq2_A 287 VSAMSLAGVSIKYLEDVPKHFKWQSLSIIRCQLKQFPTLDLPFLKSLTLTMNKGSISFKKVALPSLSYLDLSRNALSFSG 366 (606)
T ss_dssp CSEEEEESCCCCCCCCCCTTCCCSEEEEESCCCSSCCCCCCSSCCEEEEESCSSCEECCCCCCTTCCEEECCSSCEEEEE
T ss_pred CCEEEecCccchhhhhccccccCCEEEcccccCcccccCCCCccceeeccCCcCccchhhccCCCCCEEECcCCccCCCc
Confidence 333345555666665553222 113446677788888888877653
Q ss_pred --ccccCCccccceeeccCcccccccCccccCCCCCCEEEccCCcccCCCC-cCCcCCCCCCeEEccCCcccCCCCcccc
Q 004268 204 --TKEVGNMKNLDRLHLNGNNLTGSIPSTIGYLNLLDELHLSHNRLDGPIP-PTIGNLTNLIALDLSSNQLSGLLPREVG 280 (764)
Q Consensus 204 --~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 280 (764)
+..+..+++|++|++++|.+++ .+..+..+++|+.|++++|.+.+..+ ..+..+++|+.|++++|.+.+..+..+.
T Consensus 367 ~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 445 (606)
T 3vq2_A 367 CCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFL 445 (606)
T ss_dssp ECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTT
T ss_pred chhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhc
Confidence 5678889999999999999996 45889999999999999999998877 6899999999999999999988999999
Q ss_pred CCCCCCeEeccCccccC-CCCCCCCCCCccceEEccCCcCccCCChhhhcccccceeeccccccccCCchhcccccccce
Q 004268 281 NLKYLASLSLNGNILIG-PIPPTIGYLTNLTYLNLGYNRLSSSIPPELMNCSQLLNLVLSHNSLSGSIPSEIGNLIFFRQ 359 (764)
Q Consensus 281 ~l~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~ 359 (764)
++++|+.|++++|.+.+ ..|..+..+++|++|+|++|++++..|..|.++++|++|+|++|++++..|..+.++++|+.
T Consensus 446 ~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 525 (606)
T 3vq2_A 446 GLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLST 525 (606)
T ss_dssp TCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCE
T ss_pred CCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCE
Confidence 99999999999999987 47889999999999999999999888999999999999999999999988999999999999
Q ss_pred eecccccccCCCCCCCCCCC-ccceecCCCCccccccCC
Q 004268 360 LDLSRNFINGTIPSQLGKIP-NISAVDLSKNNLSGVIPA 397 (764)
Q Consensus 360 L~l~~N~l~~~~~~~~~~l~-~L~~l~l~~N~l~~~~~~ 397 (764)
|+|++|+++ .+|..+..++ +|+.|++++|++.|..+.
T Consensus 526 L~l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c~c~~ 563 (606)
T 3vq2_A 526 LDCSFNRIE-TSKGILQHFPKSLAFFNLTNNSVACICEH 563 (606)
T ss_dssp EECTTSCCC-CEESCGGGSCTTCCEEECCSCCCCCSSTT
T ss_pred EECCCCcCc-ccCHhHhhhcccCcEEEccCCCcccCCcc
Confidence 999999999 5666688887 599999999999987764
No 20
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=9.8e-47 Score=387.15 Aligned_cols=241 Identities=22% Similarity=0.318 Sum_probs=200.9
Q ss_pred hhcCCcceeeeecCceeEEEEEEC------CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCC
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLS------SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNK 580 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~ 580 (764)
..++++.+.||+|+||+||+|.+. +++.||||++....... ..++|.+|+.++++++|||||+++|++.+++
T Consensus 25 ~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~--~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~ 102 (308)
T 4gt4_A 25 LSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGP--LREEFRHEAMLRARLQHPNVVCLLGVVTKDQ 102 (308)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC---CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred HHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChH--HHHHHHHHHHHHHhCCCCCCCCcceEEEECC
Confidence 356788899999999999999752 56789999997654332 2478999999999999999999999999999
Q ss_pred EEEEEEEecCCCCHHHHHhcCc-------------cccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeec
Q 004268 581 CMFLIYEYMERGSLFCVLRNDV-------------EAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLN 647 (764)
Q Consensus 581 ~~~lv~e~~~~~~L~~~l~~~~-------------~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~ 647 (764)
..++|||||++|+|.+++.... ....+++.++..|+.||+.||+||| +++||||||||+|||++
T Consensus 103 ~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDLK~~NILl~ 179 (308)
T 4gt4_A 103 PLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLS---SHHVVHKDLATRNVLVY 179 (308)
T ss_dssp SCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEC
T ss_pred EEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCCCCCCccccceEEC
Confidence 9999999999999999996432 1345899999999999999999999 89999999999999999
Q ss_pred CCCCEEEeeeccccccCCCC--CCceecccccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccccccc--
Q 004268 648 SNLEAFVADFGLARLLHPDS--SNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLM-GSHPTDLLSSLSSS-- 722 (764)
Q Consensus 648 ~~~~~kl~Dfg~~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~llt-g~~Pf~~~~~~~~~-- 722 (764)
+++.+||+|||+|+...... ...+...||+.|||||++.+..|+.++|||||||++|||+| |+.||.+.+..+..
T Consensus 180 ~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~~~~ 259 (308)
T 4gt4_A 180 DKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEM 259 (308)
T ss_dssp GGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHH
T ss_pred CCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence 99999999999998764322 22334678999999999999999999999999999999998 89999987653322
Q ss_pred --cCCcCCCCCCCcHHHHHHHhhhhccchhhH
Q 004268 723 --SGRKISQNPRLDLQCNAYLKNFSQGNHRWE 752 (764)
Q Consensus 723 --~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 752 (764)
.......++..+..+.+++.+||+.++.-|
T Consensus 260 i~~~~~~~~p~~~~~~~~~li~~C~~~dP~~R 291 (308)
T 4gt4_A 260 IRNRQVLPCPDDCPAWVYALMIECWNEFPSRR 291 (308)
T ss_dssp HHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred HHcCCCCCCcccchHHHHHHHHHHcCCChhHC
Confidence 122233455678889999999999885544
No 21
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=2.1e-46 Score=388.50 Aligned_cols=238 Identities=27% Similarity=0.467 Sum_probs=194.4
Q ss_pred hhcCCcceeeeecCceeEEEEEEC------CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCC
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLS------SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNK 580 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~ 580 (764)
.++|.+.+.||+|+||+||+|+++ +++.||||++... .....+.|.+|++++++++|||||++++++.+.+
T Consensus 40 ~~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~---~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~ 116 (329)
T 4aoj_A 40 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA---SESARQDFQREAELLTMLQHQHIVRFFGVCTEGR 116 (329)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCC---SHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS
T ss_pred HHHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcC---CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC
Confidence 356788899999999999999764 4788999999753 2344578999999999999999999999999999
Q ss_pred EEEEEEEecCCCCHHHHHhcCc------------cccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecC
Q 004268 581 CMFLIYEYMERGSLFCVLRNDV------------EAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNS 648 (764)
Q Consensus 581 ~~~lv~e~~~~~~L~~~l~~~~------------~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~ 648 (764)
..|+|||||++|+|.++++... ...++++.++..|+.||+.||+||| +++||||||||+|||+++
T Consensus 117 ~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDLKp~NILl~~ 193 (329)
T 4aoj_A 117 PLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLA---GLHFVHRDLATRNCLVGQ 193 (329)
T ss_dssp SEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEET
T ss_pred EEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecccccHhhEEECC
Confidence 9999999999999999997542 2346899999999999999999999 889999999999999999
Q ss_pred CCCEEEeeeccccccCCCCC--CceecccccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccccccc---
Q 004268 649 NLEAFVADFGLARLLHPDSS--NRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLM-GSHPTDLLSSLSSS--- 722 (764)
Q Consensus 649 ~~~~kl~Dfg~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~llt-g~~Pf~~~~~~~~~--- 722 (764)
++.+||+|||+|+....... ......||+.|||||++.+..|+.++|||||||++|||+| |+.||.+.+..+..
T Consensus 194 ~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i 273 (329)
T 4aoj_A 194 GLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCI 273 (329)
T ss_dssp TTEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHHHHH
T ss_pred CCcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence 99999999999987643322 2234578999999999999999999999999999999999 99999887653321
Q ss_pred -cCCcCCCCCCCcHHHHHHHhhhhccchh
Q 004268 723 -SGRKISQNPRLDLQCNAYLKNFSQGNHR 750 (764)
Q Consensus 723 -~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 750 (764)
.......++..+..+.+++++||+.++.
T Consensus 274 ~~g~~~~~p~~~~~~~~~li~~cl~~dP~ 302 (329)
T 4aoj_A 274 TQGRELERPRACPPEVYAIMRGCWQREPQ 302 (329)
T ss_dssp HHTCCCCCCTTCCHHHHHHHHHHCCSSTT
T ss_pred HcCCCCCCcccccHHHHHHHHHHcCcChh
Confidence 2233444556788999999999998743
No 22
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=2e-45 Score=418.49 Aligned_cols=395 Identities=21% Similarity=0.184 Sum_probs=294.2
Q ss_pred CCCeeEEEeCCCCccccCCccccCCCCCcEEEcCCCcCcccCCccccCCCCCCEEEccCCcCcccCCcccCCCCCCCEEe
Q 004268 18 FPNLVTFRIWGTLLSGRMPSEIGALSKLEKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLDLN 97 (764)
Q Consensus 18 ~~~l~~L~l~~~~~~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~ 97 (764)
.++++.|++++|.+++..+.+|..+++|++|+|++|+++++.+..|.++++|++|+|++|+++...+.+|.++++|++|+
T Consensus 27 ~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (570)
T 2z63_A 27 PFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLV 106 (570)
T ss_dssp CSSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEE
T ss_pred cccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCcccccccc
Confidence 34688888888888877777888888888888888888877777888888888888888888877777888888888888
Q ss_pred cCCCcccccCCccCcCCCCCCEEEccCCcCccc-CCccccCCCCcCEEecccCcccccCCccccCCCCC----Ceeeccc
Q 004268 98 LSNNILNGSIPLEFGNLKDLDQLRLQGNKLDGL-IPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNL----KSLFLDN 172 (764)
Q Consensus 98 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L----~~L~L~~ 172 (764)
|++|.++.+.+..|+++++|++|++++|.+.++ .|..|.++++|++|++++|+++++.+..|..+++| +.|++++
T Consensus 107 L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~ 186 (570)
T 2z63_A 107 AVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSL 186 (570)
T ss_dssp CTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTT
T ss_pred ccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCC
Confidence 888888876666788888888888888888764 47778888888888888888887777777777776 6777777
Q ss_pred CCCCCCCCCcc---------------------------------------------------------------------
Q 004268 173 NHLSGPIPSTL--------------------------------------------------------------------- 183 (764)
Q Consensus 173 n~i~~~~~~~~--------------------------------------------------------------------- 183 (764)
|.++.+.+..+
T Consensus 187 n~l~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~ 266 (570)
T 2z63_A 187 NPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAY 266 (570)
T ss_dssp CCCCEECTTTTTTCEEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEE
T ss_pred CCceecCHHHhccCcceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhhc
Confidence 77665544433
Q ss_pred ------------ccCCCccEEEecCccCcCCcccccCCccccceeeccCcccccccCccc-------------------c
Q 004268 184 ------------YHLNQLATLCLGYNKLVGPVTKEVGNMKNLDRLHLNGNNLTGSIPSTI-------------------G 232 (764)
Q Consensus 184 ------------~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~-------------------~ 232 (764)
..+++|+.|++++|.+..++ ..+..+ +|++|++++|.+.......+ .
T Consensus 267 ~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~l~-~~~~~~-~L~~L~l~~n~~~~l~~~~l~~L~~L~l~~n~~~~~~~~~ 344 (570)
T 2z63_A 267 LDYYLDDIIDLFNCLTNVSSFSLVSVTIERVK-DFSYNF-GWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEV 344 (570)
T ss_dssp TTEEESCSTTTTGGGTTCSEEEEESCEECSCC-BCCSCC-CCSEEEEESCBCSSCCBCBCSSCCEEEEESCBSCCBCCCC
T ss_pred chhhhhhchhhhcCcCcccEEEecCccchhhh-hhhccC-CccEEeeccCcccccCcccccccCEEeCcCCccccccccc
Confidence 33455556666655555432 223333 45555555554442211111 3
Q ss_pred CCCCCCEEEccCCcccCCC--CcCCcCCCCCCeEEccCCcccCCCCccccCCCCCCeEeccCccccCCCC-CCCCCCCcc
Q 004268 233 YLNLLDELHLSHNRLDGPI--PPTIGNLTNLIALDLSSNQLSGLLPREVGNLKYLASLSLNGNILIGPIP-PTIGYLTNL 309 (764)
Q Consensus 233 ~l~~L~~L~L~~n~l~~~~--~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~-~~~~~l~~L 309 (764)
.+++|+.|++++|.+++.. +..+..+++|+.|++++|.+.+..+. +..+++|+.|++++|.+.+..+ ..+..+++|
T Consensus 345 ~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L 423 (570)
T 2z63_A 345 DLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNL 423 (570)
T ss_dssp BCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTC
T ss_pred cCCCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhhhhcCCCC
Confidence 4566777777777766443 45566777788888888877755444 7888888888888888877655 467888888
Q ss_pred ceEEccCCcCccCCChhhhcccccceeeccccccc-cCCchhcccccccceeecccccccCCCCCCCCCCCccceecCCC
Q 004268 310 TYLNLGYNRLSSSIPPELMNCSQLLNLVLSHNSLS-GSIPSEIGNLIFFRQLDLSRNFINGTIPSQLGKIPNISAVDLSK 388 (764)
Q Consensus 310 ~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~-~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~ 388 (764)
++|++++|.+++..|..+.++++|++|++++|+++ +.+|..+..+++|+.|+|++|++++..|..|..+++|+.|++++
T Consensus 424 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 503 (570)
T 2z63_A 424 IYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMAS 503 (570)
T ss_dssp CEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCC
Confidence 88888888888778888888888888888888887 46778888888888899988888888888888888888899988
Q ss_pred CccccccCCcc---ccCccccccCCCCCCC
Q 004268 389 NNLSGVIPASV---RRIPKLIVSENNLELE 415 (764)
Q Consensus 389 N~l~~~~~~~~---~~~~~~~~~~n~~~~~ 415 (764)
|++++..|..+ +.+..+++++|++.|.
T Consensus 504 n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 533 (570)
T 2z63_A 504 NQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 533 (570)
T ss_dssp SCCSCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred CcCCCCCHHHhhcccCCcEEEecCCcccCC
Confidence 88888777654 4667778888888654
No 23
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=3.8e-46 Score=380.67 Aligned_cols=235 Identities=25% Similarity=0.434 Sum_probs=190.4
Q ss_pred hhcCCcceeeeecCceeEEEEEECCCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEEEEEE
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFLIY 586 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 586 (764)
.+++++.+.||+|+||+||+|+++ ..||||+++.... .....+.|.+|++++++++|||||++++++.+ +..|+||
T Consensus 35 ~~~l~l~~~iG~G~fG~Vy~~~~~--~~vAvK~~~~~~~-~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVm 110 (307)
T 3omv_A 35 ASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDP-TPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVT 110 (307)
T ss_dssp TTSCCEEEECCCCSSSEEEEEESS--SEEEEEECCCSSC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEE
T ss_pred HHHeEEeeEEeeCCCcEEEEEEEC--CcEEEEEEEecCC-CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEE
Confidence 467889999999999999999875 3699999875543 34456889999999999999999999998865 4589999
Q ss_pred EecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeeccccccCCC
Q 004268 587 EYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLARLLHPD 666 (764)
Q Consensus 587 e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 666 (764)
|||++|+|.+++... ...+++.++..|+.||+.||+||| +++||||||||+|||+++++.+||+|||+|+.....
T Consensus 111 Ey~~gGsL~~~l~~~--~~~l~~~~~~~i~~qia~gL~yLH---~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~ 185 (307)
T 3omv_A 111 QWCEGSSLYKHLHVQ--ETKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRW 185 (307)
T ss_dssp ECCSSCBHHHHHHTS--CCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCCSSSEEEETTEEEEECCCSSCBC----
T ss_pred EcCCCCCHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCccCHHHEEECCCCcEEEeeccCceecccC
Confidence 999999999999743 346899999999999999999999 889999999999999999999999999999876432
Q ss_pred C--CCceecccccccccccccccC---CCCccchHHHHHHHHHHHHhCCCCCCcccccccc-----cCCc----CCCCCC
Q 004268 667 S--SNRTLVVGTYGYIAPELAYTM---AVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSSS-----SGRK----ISQNPR 732 (764)
Q Consensus 667 ~--~~~~~~~g~~~y~aPE~~~~~---~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~~-----~~~~----~~~~~~ 732 (764)
. ......+||+.|||||++.+. .|+.++|||||||++|||+||+.||.+.+..... .... ....+.
T Consensus 186 ~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 265 (307)
T 3omv_A 186 SGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKN 265 (307)
T ss_dssp --------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTCCCCCSTTSCTT
T ss_pred CcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCCccccccc
Confidence 2 223456899999999998643 5899999999999999999999999876542211 1111 122345
Q ss_pred CcHHHHHHHhhhhccchh
Q 004268 733 LDLQCNAYLKNFSQGNHR 750 (764)
Q Consensus 733 ~~~~~~~~~~~~l~~~~~ 750 (764)
.+..+.+++.+||+.++.
T Consensus 266 ~~~~l~~li~~cl~~dP~ 283 (307)
T 3omv_A 266 CPKAMKRLVADCVKKVKE 283 (307)
T ss_dssp SCHHHHHHHHHHTCSSST
T ss_pred chHHHHHHHHHHcCCCHh
Confidence 678899999999998843
No 24
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=7.6e-45 Score=430.19 Aligned_cols=382 Identities=22% Similarity=0.216 Sum_probs=307.4
Q ss_pred cccccccCCCeeEEEeCCCCccccC-CccccCCCCCcEEEcCCCcCcccCCccccCCCCCCEEEccCCcCcccCCcc--c
Q 004268 11 SQLNFTCFPNLVTFRIWGTLLSGRM-PSEIGALSKLEKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTGTIPSE--I 87 (764)
Q Consensus 11 ~~~~~~~~~~l~~L~l~~~~~~~~~-~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~--~ 87 (764)
....|..+++|+.|++++|...+.+ |..|..+++|++|+|++|.+++..|+.|.++++|++|+|++|.+++..+.. |
T Consensus 40 ~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~ 119 (844)
T 3j0a_A 40 TASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYF 119 (844)
T ss_dssp CSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCC
T ss_pred ChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEeeCcCCCCCcccccCccc
Confidence 3456778888888888888554444 677888888888888888888777888888888888888888887644443 7
Q ss_pred CCCCCCCEEecCCCcccccCC-ccCcCCCCCCEEEccCCcCcccCCccccCC--CC------------------------
Q 004268 88 GSLRDLLDLNLSNNILNGSIP-LEFGNLKDLDQLRLQGNKLDGLIPSSIGNL--TN------------------------ 140 (764)
Q Consensus 88 ~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l--~~------------------------ 140 (764)
..+++|++|+|++|.+++..+ ..|+++++|++|+|++|.++++.+..|..+ ++
T Consensus 120 ~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~ 199 (844)
T 3j0a_A 120 RNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMN 199 (844)
T ss_dssp SSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSC
T ss_pred cccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEECCCCccccccccchhhcCC
Confidence 788888888888888876654 467888888888888888776665555433 22
Q ss_pred ------cCEEecccCcccccCCccc------------------------------------cC--CCCCCeeecccCCCC
Q 004268 141 ------LTYLDLSLNQLSGRLPQEV------------------------------------GN--LKNLKSLFLDNNHLS 176 (764)
Q Consensus 141 ------L~~L~L~~n~l~~~~~~~~------------------------------------~~--l~~L~~L~L~~n~i~ 176 (764)
|++|+|++|.+++..+..+ .+ .++|+.|++++|.++
T Consensus 200 ~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~ 279 (844)
T 3j0a_A 200 PFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVF 279 (844)
T ss_dssp TTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCC
T ss_pred ccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChhhhhccccCCccEEECCCCccc
Confidence 6777777776543333222 22 268999999999999
Q ss_pred CCCCCccccCCCccEEEecCccCcCCcccccCCccccceeeccCcccccccCccccCCCCCCEEEccCCcccCCCCcCCc
Q 004268 177 GPIPSTLYHLNQLATLCLGYNKLVGPVTKEVGNMKNLDRLHLNGNNLTGSIPSTIGYLNLLDELHLSHNRLDGPIPPTIG 256 (764)
Q Consensus 177 ~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 256 (764)
++.+..|..+++|+.|+|++|++..+.+..|..+++|++|+|++|.+++..+..|..+++|+.|++++|.+..+.+..|.
T Consensus 280 ~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~ 359 (844)
T 3j0a_A 280 SLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFK 359 (844)
T ss_dssp EECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSC
T ss_pred ccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhc
Confidence 88899999999999999999999998889999999999999999999988899999999999999999999988888999
Q ss_pred CCCCCCeEEccCCcccCCCC----------------------------------------ccccCCCCCCeEeccCcccc
Q 004268 257 NLTNLIALDLSSNQLSGLLP----------------------------------------REVGNLKYLASLSLNGNILI 296 (764)
Q Consensus 257 ~l~~L~~L~L~~n~l~~~~~----------------------------------------~~~~~l~~L~~L~l~~n~l~ 296 (764)
.+++|+.|+|++|.++++.. ..+.++++|+.|+|++|++.
T Consensus 360 ~l~~L~~L~Ls~N~l~~i~~~~~L~~L~l~~N~l~~l~~~~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~ 439 (844)
T 3j0a_A 360 FLEKLQTLDLRDNALTTIHFIPSIPDIFLSGNKLVTLPKINLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFS 439 (844)
T ss_dssp SCCCCCEEEEETCCSCCCSSCCSCSEEEEESCCCCCCCCCCTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCC
T ss_pred CCCCCCEEECCCCCCCcccCCCCcchhccCCCCcccccccccccceeecccCccccCchhhhhhcCCccceeeCCCCccc
Confidence 99999999999998874321 01225666777777776665
Q ss_pred CC------------------------------CCCCCCCCCccceEEccCCcCccCCChhhhcccccceeeccccccccC
Q 004268 297 GP------------------------------IPPTIGYLTNLTYLNLGYNRLSSSIPPELMNCSQLLNLVLSHNSLSGS 346 (764)
Q Consensus 297 ~~------------------------------~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~ 346 (764)
+. .+..|..+++|+.|+|++|++++..|..|.++++|+.|+|++|++++.
T Consensus 440 ~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l 519 (844)
T 3j0a_A 440 SCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVL 519 (844)
T ss_dssp CCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSC
T ss_pred ccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCcc
Confidence 32 224477889999999999999988888899999999999999999987
Q ss_pred CchhcccccccceeecccccccCCCCCCCCCCCccceecCCCCccccccCC
Q 004268 347 IPSEIGNLIFFRQLDLSRNFINGTIPSQLGKIPNISAVDLSKNNLSGVIPA 397 (764)
Q Consensus 347 ~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~ 397 (764)
.+..+. ++|+.|||++|++++..|..|. +|+.+++++|++.|.++-
T Consensus 520 ~~~~~~--~~L~~L~Ls~N~l~~~~~~~~~---~L~~l~l~~Np~~C~c~~ 565 (844)
T 3j0a_A 520 SHNDLP--ANLEILDISRNQLLAPNPDVFV---SLSVLDITHNKFICECEL 565 (844)
T ss_dssp CCCCCC--SCCCEEEEEEECCCCCCSCCCS---SCCEEEEEEECCCCSSSC
T ss_pred Chhhhh--ccccEEECCCCcCCCCChhHhC---CcCEEEecCCCccccccc
Confidence 777666 8999999999999999888764 788999999999987663
No 25
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=7.2e-45 Score=413.84 Aligned_cols=385 Identities=22% Similarity=0.242 Sum_probs=339.8
Q ss_pred ccccccccCCCeeEEEeCCCCccccCCccccCCCCCcEEEcCCCcCcccCCccccCCCCCCEEEccCCcCcccCCcccCC
Q 004268 10 LSQLNFTCFPNLVTFRIWGTLLSGRMPSEIGALSKLEKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTGTIPSEIGS 89 (764)
Q Consensus 10 ~~~~~~~~~~~l~~L~l~~~~~~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~ 89 (764)
+....|.++++|++|++++|.+++..+..|..+++|++|+|++|.++++.+..|.++++|++|++++|+++...+..|+.
T Consensus 43 ~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~ 122 (570)
T 2z63_A 43 LGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGH 122 (570)
T ss_dssp ECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCSCTT
T ss_pred cChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccccccccccCCCccccc
Confidence 34457999999999999999999988899999999999999999999888899999999999999999999766668999
Q ss_pred CCCCCEEecCCCccccc-CCccCcCCCCCCEEEccCCcCcccCCccccCCCCc----CEEecccCcccccCCc-------
Q 004268 90 LRDLLDLNLSNNILNGS-IPLEFGNLKDLDQLRLQGNKLDGLIPSSIGNLTNL----TYLDLSLNQLSGRLPQ------- 157 (764)
Q Consensus 90 l~~L~~L~L~~n~l~~~-~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L----~~L~L~~n~l~~~~~~------- 157 (764)
+++|++|+|++|.++++ .|..|+++++|++|++++|+++++.+..|..+++| +.|++++|.++++.+.
T Consensus 123 l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n~l~~~~~~~~~~~~L 202 (570)
T 2z63_A 123 LKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRL 202 (570)
T ss_dssp CTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTCEE
T ss_pred cccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCCCCceecCHHHhccCcc
Confidence 99999999999999874 58899999999999999999998888888888888 7888888877655443
Q ss_pred --------------------------------------------------------------------------cccCCC
Q 004268 158 --------------------------------------------------------------------------EVGNLK 163 (764)
Q Consensus 158 --------------------------------------------------------------------------~~~~l~ 163 (764)
.|..++
T Consensus 203 ~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~~l~ 282 (570)
T 2z63_A 203 HKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLT 282 (570)
T ss_dssp EEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEETTEEESCSTTTTGGGT
T ss_pred eeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhhcchhhhhhchhhhcCcC
Confidence 344567
Q ss_pred CCCeeecccCCCCCCCCCccccCCCccEEEecCccCcCCccccc-------------------CCccccceeeccCcccc
Q 004268 164 NLKSLFLDNNHLSGPIPSTLYHLNQLATLCLGYNKLVGPVTKEV-------------------GNMKNLDRLHLNGNNLT 224 (764)
Q Consensus 164 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~-------------------~~l~~L~~L~L~~n~l~ 224 (764)
+|++|++++|.++. .+..+..+ +|++|++++|.+..++...+ ..+++|++|++++|.++
T Consensus 283 ~L~~L~l~~~~l~~-l~~~~~~~-~L~~L~l~~n~~~~l~~~~l~~L~~L~l~~n~~~~~~~~~~~~~L~~L~l~~n~l~ 360 (570)
T 2z63_A 283 NVSSFSLVSVTIER-VKDFSYNF-GWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLS 360 (570)
T ss_dssp TCSEEEEESCEECS-CCBCCSCC-CCSEEEEESCBCSSCCBCBCSSCCEEEEESCBSCCBCCCCBCTTCCEEECCSSCCB
T ss_pred cccEEEecCccchh-hhhhhccC-CccEEeeccCcccccCcccccccCEEeCcCCccccccccccCCCCCEEeCcCCccC
Confidence 89999999998884 45566666 78888888887775544322 56788999999999998
Q ss_pred ccc--CccccCCCCCCEEEccCCcccCCCCcCCcCCCCCCeEEccCCcccCCCC-ccccCCCCCCeEeccCccccCCCCC
Q 004268 225 GSI--PSTIGYLNLLDELHLSHNRLDGPIPPTIGNLTNLIALDLSSNQLSGLLP-REVGNLKYLASLSLNGNILIGPIPP 301 (764)
Q Consensus 225 ~~~--~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~l~~n~l~~~~~~ 301 (764)
+.. +..+..+++|+.|++++|.+.+..+. +..+++|+.|++++|.+.+..+ ..+..+++|+.|++++|.+.+..|.
T Consensus 361 ~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 439 (570)
T 2z63_A 361 FKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNG 439 (570)
T ss_dssp EEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTT
T ss_pred ccccccccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchh
Confidence 654 67788999999999999999966554 9999999999999999987755 5789999999999999999999999
Q ss_pred CCCCCCccceEEccCCcCc-cCCChhhhcccccceeeccccccccCCchhcccccccceeecccccccCCCCCCCCCCCc
Q 004268 302 TIGYLTNLTYLNLGYNRLS-SSIPPELMNCSQLLNLVLSHNSLSGSIPSEIGNLIFFRQLDLSRNFINGTIPSQLGKIPN 380 (764)
Q Consensus 302 ~~~~l~~L~~L~ls~N~l~-~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~ 380 (764)
.+..+++|++|++++|+++ +..|..+..+++|++|+|++|++++..|..+..+++|+.|+|++|++++..+..|..+++
T Consensus 440 ~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~ 519 (570)
T 2z63_A 440 IFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTS 519 (570)
T ss_dssp TTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTT
T ss_pred hhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccC
Confidence 9999999999999999998 468889999999999999999999888999999999999999999999998899999999
Q ss_pred cceecCCCCccccccCC
Q 004268 381 ISAVDLSKNNLSGVIPA 397 (764)
Q Consensus 381 L~~l~l~~N~l~~~~~~ 397 (764)
|+.|++++|+++|.+|.
T Consensus 520 L~~L~l~~N~~~~~~~~ 536 (570)
T 2z63_A 520 LQKIWLHTNPWDCSCPR 536 (570)
T ss_dssp CCEEECCSSCBCCCTTT
T ss_pred CcEEEecCCcccCCCcc
Confidence 99999999999998875
No 26
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=9e-46 Score=379.17 Aligned_cols=234 Identities=22% Similarity=0.362 Sum_probs=182.3
Q ss_pred hhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCC-----
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNK----- 580 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~----- 580 (764)
.++|++.+.||+|+||+||+|+++ +|+.||||++..... +...+.+.+|++++++++|||||++++++.+.+
T Consensus 4 l~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~--~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~ 81 (299)
T 4g31_A 4 LTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNR--ELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKL 81 (299)
T ss_dssp HHHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSS--HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC-----
T ss_pred chhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCC--HHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccc
Confidence 467999999999999999999865 799999999976543 334578899999999999999999999987544
Q ss_pred -------EEEEEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEE
Q 004268 581 -------CMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAF 653 (764)
Q Consensus 581 -------~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~k 653 (764)
..|+|||||++|+|.+++.........++..++.|+.||+.||+||| ++||+||||||+|||++.++.+|
T Consensus 82 ~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH---~~~IiHRDlKp~NILl~~~~~vK 158 (299)
T 4g31_A 82 QPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVK 158 (299)
T ss_dssp -----CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEE
T ss_pred cccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHH---HCcCccccCcHHHeEECCCCcEE
Confidence 37999999999999999986655556677788999999999999999 89999999999999999999999
Q ss_pred EeeeccccccCCCCC------------CceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCccccc-c
Q 004268 654 VADFGLARLLHPDSS------------NRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSL-S 720 (764)
Q Consensus 654 l~Dfg~~~~~~~~~~------------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~-~ 720 (764)
|+|||+|+....... ..+..+||+.|||||++.+..|+.++||||+||++|||++ ||....+. .
T Consensus 159 l~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~~~ 235 (299)
T 4g31_A 159 VGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMERVR 235 (299)
T ss_dssp ECCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHH
T ss_pred EccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccHHHH
Confidence 999999987654321 1233579999999999999999999999999999999996 88754321 1
Q ss_pred cccCCcCCCCCC----CcHHHHHHHhhhhccc
Q 004268 721 SSSGRKISQNPR----LDLQCNAYLKNFSQGN 748 (764)
Q Consensus 721 ~~~~~~~~~~~~----~~~~~~~~~~~~l~~~ 748 (764)
..........|. .++...+++++||+.+
T Consensus 236 ~~~~~~~~~~p~~~~~~~~~~~~li~~~L~~d 267 (299)
T 4g31_A 236 TLTDVRNLKFPPLFTQKYPCEYVMVQDMLSPS 267 (299)
T ss_dssp HHHHHHTTCCCHHHHHHCHHHHHHHHHHTCSS
T ss_pred HHHHHhcCCCCCCCcccCHHHHHHHHHHcCCC
Confidence 111111112222 2345678999999988
No 27
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=1.1e-44 Score=420.38 Aligned_cols=388 Identities=19% Similarity=0.280 Sum_probs=335.9
Q ss_pred CCeeEEEeCCCCccccCCccccCCCCCcEEEc-CCCcCccc---------------------------------------
Q 004268 19 PNLVTFRIWGTLLSGRMPSEIGALSKLEKLVL-SHNSLTGR--------------------------------------- 58 (764)
Q Consensus 19 ~~l~~L~l~~~~~~~~~~~~~~~l~~L~~L~L-s~n~i~~~--------------------------------------- 58 (764)
..++.|+|++|++.|.+|+.++.+++|++|+| ++|.+++.
T Consensus 323 ~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~ 402 (876)
T 4ecn_A 323 GRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSD 402 (876)
T ss_dssp SCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCH
T ss_pred CCEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhH
Confidence 57999999999999999999999999999999 77754332
Q ss_pred -------------------------------------CCccccCCCCCCEEEccCCcCcc-----------------cCC
Q 004268 59 -------------------------------------IPSEIGALSRLKVLDLSYNRLTG-----------------TIP 84 (764)
Q Consensus 59 -------------------------------------~~~~~~~l~~L~~L~L~~n~i~~-----------------~~~ 84 (764)
+|..|.++++|++|+|++|++++ .+|
T Consensus 403 l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP 482 (876)
T 4ecn_A 403 LLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYEN 482 (876)
T ss_dssp HHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTT
T ss_pred HHHHHhhhCccccccccccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCC
Confidence 67889999999999999999997 388
Q ss_pred cccC--CCCCCCEEecCCCcccccCCccCcCCCCCCEEEccCCc-Ccc-cCCccccCC-------CCcCEEecccCcccc
Q 004268 85 SEIG--SLRDLLDLNLSNNILNGSIPLEFGNLKDLDQLRLQGNK-LDG-LIPSSIGNL-------TNLTYLDLSLNQLSG 153 (764)
Q Consensus 85 ~~~~--~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~-l~~-~~~~~~~~l-------~~L~~L~L~~n~l~~ 153 (764)
..++ .+++|++|+|++|.+.+..|..|.++++|++|+|++|+ +++ ..|..+.++ ++|++|+|++|+++
T Consensus 483 ~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~- 561 (876)
T 4ecn_A 483 EELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE- 561 (876)
T ss_dssp SCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-
T ss_pred hhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-
Confidence 8877 99999999999999998999999999999999999998 887 566655555 49999999999999
Q ss_pred cCCc--cccCCCCCCeeecccCCCCCCCCCccccCCCccEEEecCccCcCCcccccCCccc-cceeeccCcccccccCcc
Q 004268 154 RLPQ--EVGNLKNLKSLFLDNNHLSGPIPSTLYHLNQLATLCLGYNKLVGPVTKEVGNMKN-LDRLHLNGNNLTGSIPST 230 (764)
Q Consensus 154 ~~~~--~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~-L~~L~L~~n~l~~~~~~~ 230 (764)
..|. .|.++++|+.|+|++|.++ ..| .|..+++|+.|+|++|++.. .+..+..+++ |+.|+|++|.++ .+|..
T Consensus 562 ~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~~-lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~ 637 (876)
T 4ecn_A 562 EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIEE-IPEDFCAFTDQVEGLGFSHNKLK-YIPNI 637 (876)
T ss_dssp BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCSC-CCTTSCEECTTCCEEECCSSCCC-SCCSC
T ss_pred ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCcccc-chHHHhhccccCCEEECcCCCCC-cCchh
Confidence 5666 8999999999999999999 455 89999999999999999994 4556888998 999999999999 56777
Q ss_pred ccCCCC--CCEEEccCCcccCCCCcCC---c--CCCCCCeEEccCCcccCCCCccccCCCCCCeEeccCccccCCCCCCC
Q 004268 231 IGYLNL--LDELHLSHNRLDGPIPPTI---G--NLTNLIALDLSSNQLSGLLPREVGNLKYLASLSLNGNILIGPIPPTI 303 (764)
Q Consensus 231 ~~~l~~--L~~L~L~~n~l~~~~~~~~---~--~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~ 303 (764)
+..++. |+.|+|++|.+.+.+|... . .+++|+.|+|++|.+..+.+..+..+++|+.|+|++|++..+.+..+
T Consensus 638 ~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~~ip~~~~ 717 (876)
T 4ecn_A 638 FNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMTSIPENSL 717 (876)
T ss_dssp CCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEECCSCCCSCCCTTSS
T ss_pred hhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCccCHHHHccCCCCCEEECCCCcCCccChHHh
Confidence 776654 9999999999987655322 2 34589999999999996655556789999999999999985444444
Q ss_pred CCC-------CccceEEccCCcCccCCChhhh--cccccceeeccccccccCCchhcccccccceeeccc------cccc
Q 004268 304 GYL-------TNLTYLNLGYNRLSSSIPPELM--NCSQLLNLVLSHNSLSGSIPSEIGNLIFFRQLDLSR------NFIN 368 (764)
Q Consensus 304 ~~l-------~~L~~L~ls~N~l~~~~~~~~~--~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~------N~l~ 368 (764)
... ++|+.|+|++|+++ .+|..+. .+++|+.|+|++|++++ +|..+..+++|+.|+|++ |++.
T Consensus 718 ~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l~ 795 (876)
T 4ecn_A 718 KPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRIL 795 (876)
T ss_dssp SCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCBCTTCCBCC
T ss_pred ccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCCCccccccc
Confidence 332 39999999999999 7788887 99999999999999996 788899999999999976 8888
Q ss_pred CCCCCCCCCCCccceecCCCCccccccCCccccCccccccCCCCC
Q 004268 369 GTIPSQLGKIPNISAVDLSKNNLSGVIPASVRRIPKLIVSENNLE 413 (764)
Q Consensus 369 ~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~n~~~ 413 (764)
+.+|..+..+++|+.|+|++|++..+++...+.+..+++++|++.
T Consensus 796 ~~ip~~l~~L~~L~~L~Ls~N~L~~Ip~~l~~~L~~LdLs~N~l~ 840 (876)
T 4ecn_A 796 RQWPTGITTCPSLIQLQIGSNDIRKVDEKLTPQLYILDIADNPNI 840 (876)
T ss_dssp CCCCTTGGGCSSCCEEECCSSCCCBCCSCCCSSSCEEECCSCTTC
T ss_pred ccChHHHhcCCCCCEEECCCCCCCccCHhhcCCCCEEECCCCCCC
Confidence 899999999999999999999995444445678999999999984
No 28
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=6.5e-45 Score=416.44 Aligned_cols=358 Identities=20% Similarity=0.280 Sum_probs=318.1
Q ss_pred CccccCCccccCCCCCcEEEcCCCcCccc-----------------CCcccc--CCCCCCEEEccCCcCcccCCcccCCC
Q 004268 30 LLSGRMPSEIGALSKLEKLVLSHNSLTGR-----------------IPSEIG--ALSRLKVLDLSYNRLTGTIPSEIGSL 90 (764)
Q Consensus 30 ~~~~~~~~~~~~l~~L~~L~Ls~n~i~~~-----------------~~~~~~--~l~~L~~L~L~~n~i~~~~~~~~~~l 90 (764)
++++ +|+.++.+++|++|+|++|.+++. +|..+. ++++|++|+|++|.+.+.+|..|+.+
T Consensus 194 ~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l 272 (636)
T 4eco_A 194 NITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKAL 272 (636)
T ss_dssp EEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTC
T ss_pred CCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcC
Confidence 4445 788999999999999999999985 899998 99999999999999999999999999
Q ss_pred CCCCEEecCCCc-ccc-cCCccCcCC------CCCCEEEccCCcCcccCCc--cccCCCCcCEEecccCcccccCCcccc
Q 004268 91 RDLLDLNLSNNI-LNG-SIPLEFGNL------KDLDQLRLQGNKLDGLIPS--SIGNLTNLTYLDLSLNQLSGRLPQEVG 160 (764)
Q Consensus 91 ~~L~~L~L~~n~-l~~-~~~~~~~~l------~~L~~L~L~~n~l~~~~~~--~~~~l~~L~~L~L~~n~l~~~~~~~~~ 160 (764)
++|++|+|++|. +++ ..|..+..+ ++|++|+|++|+++ ..|. .|.++++|++|+|++|++++..| .|.
T Consensus 273 ~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~ 350 (636)
T 4eco_A 273 PEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFG 350 (636)
T ss_dssp SSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCE
T ss_pred CCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhC
Confidence 999999999998 887 677777766 99999999999999 4566 89999999999999999996677 899
Q ss_pred CCCCCCeeecccCCCCCCCCCccccCCC-ccEEEecCccCcCCcccccCCcc--ccceeeccCcccccccCcccc-----
Q 004268 161 NLKNLKSLFLDNNHLSGPIPSTLYHLNQ-LATLCLGYNKLVGPVTKEVGNMK--NLDRLHLNGNNLTGSIPSTIG----- 232 (764)
Q Consensus 161 ~l~~L~~L~L~~n~i~~~~~~~~~~l~~-L~~L~l~~n~i~~~~~~~~~~l~--~L~~L~L~~n~l~~~~~~~~~----- 232 (764)
++++|++|++++|.++ ..+..+..+++ |++|++++|.+..++ ..+..++ +|++|++++|.+++..|..+.
T Consensus 351 ~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~~lp-~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~ 428 (636)
T 4eco_A 351 SEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLKYIP-NIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPT 428 (636)
T ss_dssp EEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCSSCC-SCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSS
T ss_pred CCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCcccc-hhhhhcccCccCEEECcCCcCCCcchhhhcccccc
Confidence 9999999999999999 56677999999 999999999999554 4565544 899999999999998888888
Q ss_pred --CCCCCCEEEccCCcccCCCCcCCcCCCCCCeEEccCCcccCCCCccccCCC-------CCCeEeccCccccCCCCCCC
Q 004268 233 --YLNLLDELHLSHNRLDGPIPPTIGNLTNLIALDLSSNQLSGLLPREVGNLK-------YLASLSLNGNILIGPIPPTI 303 (764)
Q Consensus 233 --~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~-------~L~~L~l~~n~l~~~~~~~~ 303 (764)
.+++|+.|+|++|.++.+.+..+..+++|+.|+|++|+++.+.+..+.... +|+.|+|++|+++ .+|..+
T Consensus 429 ~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~ 507 (636)
T 4eco_A 429 PFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDF 507 (636)
T ss_dssp CCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCSBCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGG
T ss_pred cccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCCCcCHHHhccccccccccCCccEEECcCCcCC-ccChhh
Confidence 788999999999999976666677899999999999999966665665543 9999999999998 566667
Q ss_pred C--CCCccceEEccCCcCccCCChhhhcccccceeec------cccccccCCchhcccccccceeecccccccCCCCCCC
Q 004268 304 G--YLTNLTYLNLGYNRLSSSIPPELMNCSQLLNLVL------SHNSLSGSIPSEIGNLIFFRQLDLSRNFINGTIPSQL 375 (764)
Q Consensus 304 ~--~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l------s~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~ 375 (764)
. .+++|++|+|++|++++ +|..+..+++|+.|+| ++|++.+.+|..+..+++|+.|+|++|++. .+|..+
T Consensus 508 ~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~-~ip~~~ 585 (636)
T 4eco_A 508 RATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDIR-KVNEKI 585 (636)
T ss_dssp STTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCCC-BCCSCC
T ss_pred hhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCCCCCEEECCCCcCC-ccCHhH
Confidence 6 89999999999999996 8899999999999999 568888899999999999999999999995 677766
Q ss_pred CCCCccceecCCCCccccccCC
Q 004268 376 GKIPNISAVDLSKNNLSGVIPA 397 (764)
Q Consensus 376 ~~l~~L~~l~l~~N~l~~~~~~ 397 (764)
. ++|+.|++++|++.+..+.
T Consensus 586 ~--~~L~~L~Ls~N~l~~~~~~ 605 (636)
T 4eco_A 586 T--PNISVLDIKDNPNISIDLS 605 (636)
T ss_dssp C--TTCCEEECCSCTTCEEECT
T ss_pred h--CcCCEEECcCCCCccccHH
Confidence 5 8999999999999875543
No 29
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=5.4e-44 Score=394.57 Aligned_cols=373 Identities=21% Similarity=0.167 Sum_probs=320.1
Q ss_pred eeEEEeCCCCccccCCccccCCCCCcEEEcCCCcCcccCCccccCCCCCCEEEccCCcCcc-cCCcccCCCCCCCEEecC
Q 004268 21 LVTFRIWGTLLSGRMPSEIGALSKLEKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTG-TIPSEIGSLRDLLDLNLS 99 (764)
Q Consensus 21 l~~L~l~~~~~~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~-~~~~~~~~l~~L~~L~L~ 99 (764)
-+.+++.+++++ .+|. + .++|++|+|++|.++++.|..|.++++|++|+|++|.+.+ ..+..|.++++|++|+|+
T Consensus 12 ~~~~~c~~~~l~-~lp~-l--~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls 87 (455)
T 3v47_A 12 GYNAICINRGLH-QVPE-L--PAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLD 87 (455)
T ss_dssp TTEEECCSSCCS-SCCC-C--CTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECT
T ss_pred ccccCcCCCCcc-cCCC-C--CCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCC
Confidence 446788888886 5565 3 3789999999999998888889999999999999998863 446788999999999999
Q ss_pred CCcccccCCccCcCCCCCCEEEccCCcCcccCCc--cccCCCCcCEEecccCcccccCCcc-ccCCCCCCeeecccCCCC
Q 004268 100 NNILNGSIPLEFGNLKDLDQLRLQGNKLDGLIPS--SIGNLTNLTYLDLSLNQLSGRLPQE-VGNLKNLKSLFLDNNHLS 176 (764)
Q Consensus 100 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~~~l~~L~~L~L~~n~l~~~~~~~-~~~l~~L~~L~L~~n~i~ 176 (764)
+|.++++.+..|.++++|++|+|++|.+++..+. .|.++++|++|+|++|+++++.|.. |.++++|++|++++|.++
T Consensus 88 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~ 167 (455)
T 3v47_A 88 YNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVK 167 (455)
T ss_dssp TCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBS
T ss_pred CCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCccc
Confidence 9999888888999999999999999999864333 4888999999999999998876765 788999999999999998
Q ss_pred CCCCCccccC--CCccEEEecCccCcCCcccc--------cCCccccceeeccCcccccccCccccCC---CCCCEEEcc
Q 004268 177 GPIPSTLYHL--NQLATLCLGYNKLVGPVTKE--------VGNMKNLDRLHLNGNNLTGSIPSTIGYL---NLLDELHLS 243 (764)
Q Consensus 177 ~~~~~~~~~l--~~L~~L~l~~n~i~~~~~~~--------~~~l~~L~~L~L~~n~l~~~~~~~~~~l---~~L~~L~L~ 243 (764)
++.+..+..+ .+|+.|++++|.+..+.... +..+++|++|++++|.+++..+..+... ++|+.|+++
T Consensus 168 ~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~ 247 (455)
T 3v47_A 168 SICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILS 247 (455)
T ss_dssp CCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECT
T ss_pred ccChhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeec
Confidence 8888877776 68899999999988765543 3356889999999999987777766544 789999999
Q ss_pred CCcccCC----------CCcCCcC--CCCCCeEEccCCcccCCCCccccCCCCCCeEeccCccccCCCCCCCCCCCccce
Q 004268 244 HNRLDGP----------IPPTIGN--LTNLIALDLSSNQLSGLLPREVGNLKYLASLSLNGNILIGPIPPTIGYLTNLTY 311 (764)
Q Consensus 244 ~n~l~~~----------~~~~~~~--l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 311 (764)
+|.+.+. .+..+.. .++|+.|++++|.+.+..+..+..+++|+.|++++|++.+..+..+..+++|++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~ 327 (455)
T 3v47_A 248 NSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLK 327 (455)
T ss_dssp TCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCE
T ss_pred cccccccccchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCE
Confidence 8865432 2222332 368999999999999999999999999999999999999988999999999999
Q ss_pred EEccCCcCccCCChhhhcccccceeeccccccccCCchhcccccccceeecccccccCCCCCCCCCCCccceecCCCCcc
Q 004268 312 LNLGYNRLSSSIPPELMNCSQLLNLVLSHNSLSGSIPSEIGNLIFFRQLDLSRNFINGTIPSQLGKIPNISAVDLSKNNL 391 (764)
Q Consensus 312 L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l 391 (764)
|+|++|++++..|..|..+++|++|+|++|++++..|..|.++++|+.|+|++|++++..+..|..+++|+.|++++|++
T Consensus 328 L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l 407 (455)
T 3v47_A 328 LNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPW 407 (455)
T ss_dssp EECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCB
T ss_pred EECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCc
Confidence 99999999988889999999999999999999988899999999999999999999988888899999999999999999
Q ss_pred ccccCC
Q 004268 392 SGVIPA 397 (764)
Q Consensus 392 ~~~~~~ 397 (764)
+|.+|.
T Consensus 408 ~~~~~~ 413 (455)
T 3v47_A 408 DCSCPR 413 (455)
T ss_dssp CCCTTT
T ss_pred ccCCCc
Confidence 998884
No 30
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=4.1e-45 Score=381.76 Aligned_cols=247 Identities=23% Similarity=0.340 Sum_probs=202.7
Q ss_pred HHHHHHhhcCCcceeeeecCceeEEEEEEC------CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCC-CceeeEe
Q 004268 501 EEMIEATEDFHIKYCIGTGGYGSVYRAQLS------SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRH-RNIVKLY 573 (764)
Q Consensus 501 ~~~~~~~~~y~~~~~ig~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h-pniv~~~ 573 (764)
.+++...++|++.+.||+|+||+||+|.+. +++.||||++...... ...+.+.+|++++++++| ||||+++
T Consensus 57 ~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~--~~~~~~~~E~~il~~l~hhpnIV~l~ 134 (353)
T 4ase_A 57 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH--SEHRALMSELKILIHIGHHLNVVNLL 134 (353)
T ss_dssp HHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCH--HHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred cccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccCh--HHHHHHHHHHHHHHHcCCCCcEEEEE
Confidence 344445689999999999999999999754 2358999999765443 334789999999999975 8999999
Q ss_pred eEEeeC-CEEEEEEEecCCCCHHHHHhcCcc-------------ccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCC
Q 004268 574 GFCLHN-KCMFLIYEYMERGSLFCVLRNDVE-------------AVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDI 639 (764)
Q Consensus 574 ~~~~~~-~~~~lv~e~~~~~~L~~~l~~~~~-------------~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dl 639 (764)
++|.+. +.+++|||||++|+|.++++.... ...+++.++..++.||+.||+||| +++||||||
T Consensus 135 g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH---~~~iiHRDL 211 (353)
T 4ase_A 135 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDL 211 (353)
T ss_dssp EEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHH---HTTCCCSCC
T ss_pred EEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHh---hCCeecCcc
Confidence 998764 568999999999999999975322 234899999999999999999999 899999999
Q ss_pred CCCCeeecCCCCEEEeeeccccccCCCCCC--ceecccccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcc
Q 004268 640 SSNNILLNSNLEAFVADFGLARLLHPDSSN--RTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLM-GSHPTDLL 716 (764)
Q Consensus 640 kp~NIll~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~llt-g~~Pf~~~ 716 (764)
||+|||+++++.+||+|||+|+........ .....||+.|||||++.+..|+.++|||||||++|||+| |+.||.+.
T Consensus 212 K~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~ 291 (353)
T 4ase_A 212 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 291 (353)
T ss_dssp SGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred CccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCC
Confidence 999999999999999999999876544332 234578999999999999999999999999999999998 99999876
Q ss_pred ccccc-----ccCCcCCCCCCCcHHHHHHHhhhhccchhhH
Q 004268 717 SSLSS-----SSGRKISQNPRLDLQCNAYLKNFSQGNHRWE 752 (764)
Q Consensus 717 ~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 752 (764)
..... ........+...+..+.+++.+||+.++.-|
T Consensus 292 ~~~~~~~~~i~~g~~~~~p~~~~~~~~~li~~c~~~dP~~R 332 (353)
T 4ase_A 292 KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQR 332 (353)
T ss_dssp CCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred CHHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCcChhHC
Confidence 54221 1122334455578899999999999884443
No 31
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=3.6e-44 Score=405.94 Aligned_cols=387 Identities=21% Similarity=0.228 Sum_probs=292.5
Q ss_pred CCCeeEEEeCCCCccccCCccccCCCCCcEEEcCCCcCcccCCccccCCCCCCEEEccCCcCcccCCcccCCCCCCCEEe
Q 004268 18 FPNLVTFRIWGTLLSGRMPSEIGALSKLEKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLDLN 97 (764)
Q Consensus 18 ~~~l~~L~l~~~~~~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~ 97 (764)
+++|++|++++|.+++..|..|..+++|++|+|++|+++++.|++|..+++|++|+|++|++++..+..|+.+++|++|+
T Consensus 25 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 104 (549)
T 2z81_A 25 TAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLN 104 (549)
T ss_dssp CTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEE
T ss_pred CCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEE
Confidence 46899999999999988899999999999999999999988889999999999999999999977777799999999999
Q ss_pred cCCCccccc-CCccCcCCCCCCEEEccCCc-CcccCCccccCCCCcCEEecccCcccccCCccccCCCCCCeeecccCCC
Q 004268 98 LSNNILNGS-IPLEFGNLKDLDQLRLQGNK-LDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNLKSLFLDNNHL 175 (764)
Q Consensus 98 L~~n~l~~~-~~~~~~~l~~L~~L~L~~n~-l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i 175 (764)
|++|.++++ .+..|.++++|++|++++|. +..+++..|.++++|++|++++|.+++..+..+.++++|++|+++.|.+
T Consensus 105 Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~ 184 (549)
T 2z81_A 105 LMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSES 184 (549)
T ss_dssp CTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBS
T ss_pred CCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCceEecccCcc
Confidence 999999864 45689999999999999998 6666667899999999999999999988888888877777777777766
Q ss_pred CCCCCCccccCCCccEEEecCccCcCCcc---cccCC-------------------------------------------
Q 004268 176 SGPIPSTLYHLNQLATLCLGYNKLVGPVT---KEVGN------------------------------------------- 209 (764)
Q Consensus 176 ~~~~~~~~~~l~~L~~L~l~~n~i~~~~~---~~~~~------------------------------------------- 209 (764)
..+....+..+++|+.|++++|++..... .....
T Consensus 185 ~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~ 264 (549)
T 2z81_A 185 AFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLN 264 (549)
T ss_dssp TTHHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEE
T ss_pred cccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhHHHHHHHHhhhhcccccccccccccc
Confidence 54333333456666666666666654310 00011
Q ss_pred --------------------------------------------ccccceeeccCcccccccCccccCCCCCCEEEccCC
Q 004268 210 --------------------------------------------MKNLDRLHLNGNNLTGSIPSTIGYLNLLDELHLSHN 245 (764)
Q Consensus 210 --------------------------------------------l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 245 (764)
.++|++|++++|.++.+....+..+++|+.|++++|
T Consensus 265 ~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~~ip~~~~~~l~~L~~L~Ls~N 344 (549)
T 2z81_A 265 GLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVFLVPCSFSQHLKSLEFLDLSEN 344 (549)
T ss_dssp CCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCCCCCHHHHHHCTTCCEEECCSS
T ss_pred ccccccccchhhhhhhcccccccccccccchhhhcccchhhhhhcccceEEEeccCccccCCHHHHhcCccccEEEccCC
Confidence 124555555555555322222356778888888888
Q ss_pred cccCCC---CcCCcCCCCCCeEEccCCcccCCCC--ccccCCCCCCeEeccCccccCCCCCCCCCCCccceEEccCCcCc
Q 004268 246 RLDGPI---PPTIGNLTNLIALDLSSNQLSGLLP--REVGNLKYLASLSLNGNILIGPIPPTIGYLTNLTYLNLGYNRLS 320 (764)
Q Consensus 246 ~l~~~~---~~~~~~l~~L~~L~L~~n~l~~~~~--~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~ 320 (764)
.+.+.. +..++.+++|+.|+|++|++++..+ ..+..+++|+.|++++|+++ .+|..+..+++|++|++++|+++
T Consensus 345 ~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~ 423 (549)
T 2z81_A 345 LMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIR 423 (549)
T ss_dssp CCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCS
T ss_pred ccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCc-cCChhhcccccccEEECCCCCcc
Confidence 887544 2346677888888888888875432 45777888888888888887 45667777888888888888887
Q ss_pred cCCChhhhcccccceeeccccccccCCchhcccccccceeecccccccCCCCCCCCCCCccceecCCCCccccccCCcc-
Q 004268 321 SSIPPELMNCSQLLNLVLSHNSLSGSIPSEIGNLIFFRQLDLSRNFINGTIPSQLGKIPNISAVDLSKNNLSGVIPASV- 399 (764)
Q Consensus 321 ~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~- 399 (764)
.+|..+ .++|+.|+|++|++++.. ..+++|+.|+|++|+|+ .+|. ...+++|+.|++++|++++.+|..+
T Consensus 424 -~l~~~~--~~~L~~L~Ls~N~l~~~~----~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~ 494 (549)
T 2z81_A 424 -VVKTCI--PQTLEVLDVSNNNLDSFS----LFLPRLQELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFD 494 (549)
T ss_dssp -CCCTTS--CTTCSEEECCSSCCSCCC----CCCTTCCEEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGG
T ss_pred -cccchh--cCCceEEECCCCChhhhc----ccCChhcEEECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHh
Confidence 334333 257888888888887542 46788888888888888 4554 4568888888899888888887654
Q ss_pred --ccCccccccCCCCCC
Q 004268 400 --RRIPKLIVSENNLEL 414 (764)
Q Consensus 400 --~~~~~~~~~~n~~~~ 414 (764)
+.+..+++++|++.|
T Consensus 495 ~l~~L~~L~l~~N~~~~ 511 (549)
T 2z81_A 495 RLTSLQKIWLHTNPWDC 511 (549)
T ss_dssp GCTTCCEEECCSSCBCC
T ss_pred cCcccCEEEecCCCccC
Confidence 466778888888743
No 32
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=8.1e-45 Score=401.30 Aligned_cols=235 Identities=23% Similarity=0.309 Sum_probs=195.9
Q ss_pred hhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCC---cHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEE
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETE---EPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCM 582 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~---~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 582 (764)
.++|++.+.||+|+||+||+|+.+ +|+.||+|++.+.... ..........++.+++.++|||||+++++|.+.+.+
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l 267 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 267 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence 468999999999999999999865 7999999999653321 122222233445666777999999999999999999
Q ss_pred EEEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeeccccc
Q 004268 583 FLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLARL 662 (764)
Q Consensus 583 ~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~ 662 (764)
|+||||++||+|..++.+ ...+++..++.++.||+.||+||| ++|||||||||+|||++.+|++||+|||+|+.
T Consensus 268 ylVmEy~~GGdL~~~l~~---~~~l~E~~a~~y~~qIl~aL~yLH---~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~ 341 (689)
T 3v5w_A 268 SFILDLMNGGDLHYHLSQ---HGVFSEADMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACD 341 (689)
T ss_dssp EEEECCCCSCBHHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EEEEecCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCchHHeEEeCCCCEEecccceeee
Confidence 999999999999999974 456999999999999999999999 99999999999999999999999999999987
Q ss_pred cCCCCCCceeccccccccccccccc-CCCCccchHHHHHHHHHHHHhCCCCCCccccccc------ccCCcCCCCCCCcH
Q 004268 663 LHPDSSNRTLVVGTYGYIAPELAYT-MAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSS------SSGRKISQNPRLDL 735 (764)
Q Consensus 663 ~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~------~~~~~~~~~~~~~~ 735 (764)
.... .....+||+.|||||++.+ ..|+.++||||+||++|||++|++||.+...... ........+..++.
T Consensus 342 ~~~~--~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~~~~~~p~~~S~ 419 (689)
T 3v5w_A 342 FSKK--KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSP 419 (689)
T ss_dssp CSSC--CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHHCCCCCCTTSCH
T ss_pred cCCC--CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCccCCH
Confidence 6533 2345689999999999964 5799999999999999999999999986543211 12233444667899
Q ss_pred HHHHHHhhhhccch
Q 004268 736 QCNAYLKNFSQGNH 749 (764)
Q Consensus 736 ~~~~~~~~~l~~~~ 749 (764)
.+.++++.|++.++
T Consensus 420 ~a~dLI~~lL~~dP 433 (689)
T 3v5w_A 420 ELRSLLEGLLQRDV 433 (689)
T ss_dssp HHHHHHHHHTCSCG
T ss_pred HHHHHHHHHccCCH
Confidence 99999999999873
No 33
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=1.6e-43 Score=410.69 Aligned_cols=368 Identities=20% Similarity=0.246 Sum_probs=313.5
Q ss_pred CCccccCCCCCcEEEcCCCcCcc-----------------cCCcccc--CCCCCCEEEccCCcCcccCCcccCCCCCCCE
Q 004268 35 MPSEIGALSKLEKLVLSHNSLTG-----------------RIPSEIG--ALSRLKVLDLSYNRLTGTIPSEIGSLRDLLD 95 (764)
Q Consensus 35 ~~~~~~~l~~L~~L~Ls~n~i~~-----------------~~~~~~~--~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~ 95 (764)
+|..++.+++|++|+|++|++++ .+|+.+. ++++|++|+|++|.+.+.+|..|..+++|++
T Consensus 440 IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~ 519 (876)
T 4ecn_A 440 ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQS 519 (876)
T ss_dssp ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCE
T ss_pred hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCE
Confidence 78899999999999999999998 3788877 9999999999999999999999999999999
Q ss_pred EecCCCc-ccc-cCCccCc-------CCCCCCEEEccCCcCcccCCc--cccCCCCcCEEecccCcccccCCccccCCCC
Q 004268 96 LNLSNNI-LNG-SIPLEFG-------NLKDLDQLRLQGNKLDGLIPS--SIGNLTNLTYLDLSLNQLSGRLPQEVGNLKN 164 (764)
Q Consensus 96 L~L~~n~-l~~-~~~~~~~-------~l~~L~~L~L~~n~l~~~~~~--~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 164 (764)
|+|++|+ +++ ..|..+. .+++|++|+|++|.++. .|. .|.++++|++|+|++|+++ ..| .|.++++
T Consensus 520 L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~~-ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~ 596 (876)
T 4ecn_A 520 LNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLEE-FPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVK 596 (876)
T ss_dssp EECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCCB-CCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSE
T ss_pred EECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCCc-cCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCc
Confidence 9999998 886 5665444 45699999999999994 566 8999999999999999999 555 8999999
Q ss_pred CCeeecccCCCCCCCCCccccCCC-ccEEEecCccCcCCcccccCCcc--ccceeeccCcccccccCccc---c--CCCC
Q 004268 165 LKSLFLDNNHLSGPIPSTLYHLNQ-LATLCLGYNKLVGPVTKEVGNMK--NLDRLHLNGNNLTGSIPSTI---G--YLNL 236 (764)
Q Consensus 165 L~~L~L~~n~i~~~~~~~~~~l~~-L~~L~l~~n~i~~~~~~~~~~l~--~L~~L~L~~n~l~~~~~~~~---~--~l~~ 236 (764)
|+.|+|++|.++ ..+..+..+++ |+.|+|++|.+..+ +..+..++ +|+.|++++|.+++.+|... . .+++
T Consensus 597 L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~~l-p~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~ 674 (876)
T 4ecn_A 597 LTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLKYI-PNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGIN 674 (876)
T ss_dssp ESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCCSC-CSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCC
T ss_pred ceEEECcCCccc-cchHHHhhccccCCEEECcCCCCCcC-chhhhccccCCCCEEECcCCcCCCccccchhhhccccCCC
Confidence 999999999999 56677999999 99999999999955 45666654 49999999999987655432 2 3458
Q ss_pred CCEEEccCCcccCCCCcCCcCCCCCCeEEccCCcccCCCCccccCC-------CCCCeEeccCccccCCCCCCCC--CCC
Q 004268 237 LDELHLSHNRLDGPIPPTIGNLTNLIALDLSSNQLSGLLPREVGNL-------KYLASLSLNGNILIGPIPPTIG--YLT 307 (764)
Q Consensus 237 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l-------~~L~~L~l~~n~l~~~~~~~~~--~l~ 307 (764)
|+.|+|++|.++.+.+..+..+++|+.|+|++|+++.+.+..+... ++|+.|+|++|++. .+|..+. .++
T Consensus 675 L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~ 753 (876)
T 4ecn_A 675 ASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMTSIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLP 753 (876)
T ss_dssp EEEEECCSSCCCSCCHHHHHTTCCCSEEECCSCCCSCCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCT
T ss_pred cCEEEccCCcCCccCHHHHccCCCCCEEECCCCcCCccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhccCC
Confidence 9999999999995554455689999999999999996555555433 39999999999998 5677776 899
Q ss_pred ccceEEccCCcCccCCChhhhcccccceeeccc------cccccCCchhcccccccceeecccccccCCCCCCCCCCCcc
Q 004268 308 NLTYLNLGYNRLSSSIPPELMNCSQLLNLVLSH------NSLSGSIPSEIGNLIFFRQLDLSRNFINGTIPSQLGKIPNI 381 (764)
Q Consensus 308 ~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~------N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L 381 (764)
+|+.|+|++|++++ +|..+..+++|+.|+|++ |++.+.+|..+.++++|+.|+|++|++ +.+|..+. ++|
T Consensus 754 ~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~--~~L 829 (876)
T 4ecn_A 754 YLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT--PQL 829 (876)
T ss_dssp TCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--SSS
T ss_pred CcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCCCcccccccccChHHHhcCCCCCEEECCCCCC-CccCHhhc--CCC
Confidence 99999999999996 788899999999999976 888889999999999999999999999 57777765 699
Q ss_pred ceecCCCCccccccCCccc---cCccccccCCCC
Q 004268 382 SAVDLSKNNLSGVIPASVR---RIPKLIVSENNL 412 (764)
Q Consensus 382 ~~l~l~~N~l~~~~~~~~~---~~~~~~~~~n~~ 412 (764)
+.|||++|++....+..+. ......+..|+.
T Consensus 830 ~~LdLs~N~l~~i~~~~~~~~~~~~~~~L~~n~~ 863 (876)
T 4ecn_A 830 YILDIADNPNISIDVTSVCPYIEAGMYVLLYDKT 863 (876)
T ss_dssp CEEECCSCTTCEEECGGGHHHHHTTCCEEECCTT
T ss_pred CEEECCCCCCCccChHHccccccchheeecCCCc
Confidence 9999999999977766553 333445555554
No 34
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=4.6e-43 Score=393.81 Aligned_cols=378 Identities=23% Similarity=0.257 Sum_probs=250.5
Q ss_pred cccccccccccCCCeeEEEeCCCCccccCCccccCCCCCcEEEcCCCcCcccCCccccCCCCCCEEEccCCcCcccCCcc
Q 004268 7 GAELSQLNFTCFPNLVTFRIWGTLLSGRMPSEIGALSKLEKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTGTIPSE 86 (764)
Q Consensus 7 ~~~~~~~~~~~~~~l~~L~l~~~~~~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~ 86 (764)
+..+...+..-.++|+.|++++|.+++..|..|..+++|++|+|++|+++++.|+.|.++++|++|+|++|+|+. +|..
T Consensus 9 ~n~l~~ip~~~~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-lp~~ 87 (520)
T 2z7x_B 9 KNGLIHVPKDLSQKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLVK-ISCH 87 (520)
T ss_dssp TSCCSSCCCSCCTTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCCE-EECC
T ss_pred CCCcccccccccccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCceee-cCcc
Confidence 333443333333789999999999998888899999999999999999998888999999999999999999984 5544
Q ss_pred cCCCCCCCEEecCCCccccc-CCccCcCCCCCCEEEccCCcCcccCCccccCCCCc--CEEecccCcc--cccCCccccC
Q 004268 87 IGSLRDLLDLNLSNNILNGS-IPLEFGNLKDLDQLRLQGNKLDGLIPSSIGNLTNL--TYLDLSLNQL--SGRLPQEVGN 161 (764)
Q Consensus 87 ~~~l~~L~~L~L~~n~l~~~-~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L--~~L~L~~n~l--~~~~~~~~~~ 161 (764)
.+++|++|+|++|.++++ .|..|+++++|++|++++|.+.+ ..|..+++| ++|++++|.+ .+..|..+..
T Consensus 88 --~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~ 162 (520)
T 2z7x_B 88 --PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGEKEDPEGLQD 162 (520)
T ss_dssp --CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTT
T ss_pred --ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeecccccccccccccccc
Confidence 789999999999999874 57889999999999999999876 457777777 9999999988 5555555544
Q ss_pred --------------------------CCCCCeeecccC------------------------------------------
Q 004268 162 --------------------------LKNLKSLFLDNN------------------------------------------ 173 (764)
Q Consensus 162 --------------------------l~~L~~L~L~~n------------------------------------------ 173 (764)
+++|+.|++++|
T Consensus 163 l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~~~~~ 242 (520)
T 2z7x_B 163 FNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQ 242 (520)
T ss_dssp CCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEEEEHHHHHHHHH
T ss_pred cccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchhhhccccchhhccccccccCHHHHHHHHH
Confidence 333344444333
Q ss_pred ---------------CCCCCCCCcc-----ccCCCccEEEecCccCcCCcccccCCc---cccceeeccCcccccccCcc
Q 004268 174 ---------------HLSGPIPSTL-----YHLNQLATLCLGYNKLVGPVTKEVGNM---KNLDRLHLNGNNLTGSIPST 230 (764)
Q Consensus 174 ---------------~i~~~~~~~~-----~~l~~L~~L~l~~n~i~~~~~~~~~~l---~~L~~L~L~~n~l~~~~~~~ 230 (764)
.+++..+..+ ..+++|+.+++++|.+ .++...+..+ .+|+.|++++|.+.... .
T Consensus 243 ~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~-~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~--~ 319 (520)
T 2z7x_B 243 LVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF-GFPQSYIYEIFSNMNIKNFTVSGTRMVHML--C 319 (520)
T ss_dssp HHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC-CSCTHHHHHHHHTCCCSEEEEESSCCCCCC--C
T ss_pred HhhhCcccEEEeecccccCccccchhhcccccCceeEeccccccce-ecchhhhhcccccCceeEEEcCCCcccccc--c
Confidence 3332223322 3344444444444443 2221112111 33455555555443221 1
Q ss_pred ccCCCCCCEEEccCCcccCCCCcCCcCCCCCCeEEccCCcccC--CCCccccCCCCCCeEeccCccccC-CCCCCCCCCC
Q 004268 231 IGYLNLLDELHLSHNRLDGPIPPTIGNLTNLIALDLSSNQLSG--LLPREVGNLKYLASLSLNGNILIG-PIPPTIGYLT 307 (764)
Q Consensus 231 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~--~~~~~~~~l~~L~~L~l~~n~l~~-~~~~~~~~l~ 307 (764)
+..+++|+.|++++|.+++..|..+..+++|+.|+|++|++++ ..|..+..+++|+.|++++|.+.+ ..+..+..++
T Consensus 320 ~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~ 399 (520)
T 2z7x_B 320 PSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTK 399 (520)
T ss_dssp CSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCT
T ss_pred hhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCc
Confidence 2456667777777777776666666677777777777777764 233556667777777777777765 3333466667
Q ss_pred ccceEEccCCcCccCCChhhhcccccceeeccccccccCCchhcccccccceeecccccccCCCCCCCCCCCccceecCC
Q 004268 308 NLTYLNLGYNRLSSSIPPELMNCSQLLNLVLSHNSLSGSIPSEIGNLIFFRQLDLSRNFINGTIPSQLGKIPNISAVDLS 387 (764)
Q Consensus 308 ~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~ 387 (764)
+|++|++++|++++..|..+. ++|+.|++++|+++ .+|..+..+++|+.|+|++|+++...+..|..+++|+.|+++
T Consensus 400 ~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~ 476 (520)
T 2z7x_B 400 SLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLH 476 (520)
T ss_dssp TCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred cCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCccCHHHhccCCcccEEECc
Confidence 777777777777655444432 56777777777776 555555567777777777777764443446667777777777
Q ss_pred CCccccccC
Q 004268 388 KNNLSGVIP 396 (764)
Q Consensus 388 ~N~l~~~~~ 396 (764)
+|+++|.++
T Consensus 477 ~N~~~c~c~ 485 (520)
T 2z7x_B 477 TNPWDCSCP 485 (520)
T ss_dssp SSCBCCCHH
T ss_pred CCCCcccCC
Confidence 777766554
No 35
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=5.9e-44 Score=379.80 Aligned_cols=234 Identities=25% Similarity=0.350 Sum_probs=193.1
Q ss_pred hhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEee------C
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLH------N 579 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~------~ 579 (764)
.++|++.+.||+|+||+||+|++. +|+.||||++...... ....+.+.+|++++++++|||||++++++.. .
T Consensus 53 ~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~ 131 (398)
T 4b99_A 53 GDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDV-VTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEF 131 (398)
T ss_dssp CSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSS-HHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTC
T ss_pred CCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccc-hHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccC
Confidence 368999999999999999999865 8999999999765543 3345778899999999999999999998764 3
Q ss_pred CEEEEEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeecc
Q 004268 580 KCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGL 659 (764)
Q Consensus 580 ~~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~ 659 (764)
+.+|+|||||+ |+|.+++.. ...+++..++.++.||+.||+||| ++|||||||||+|||++.++.+||+|||+
T Consensus 132 ~~~~ivmE~~~-g~L~~~i~~---~~~l~~~~~~~~~~qil~al~ylH---~~~iiHRDlKP~NIl~~~~~~~Ki~DFGl 204 (398)
T 4b99_A 132 KSVYVVLDLME-SDLHQIIHS---SQPLTLEHVRYFLYQLLRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGM 204 (398)
T ss_dssp CCEEEEEECCS-EEHHHHHTS---SSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTCCEEECCCTT
T ss_pred CEEEEEEeCCC-CCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH---HCcCcCCCcCccccccCCCCCEEEeecce
Confidence 57899999996 579999973 457999999999999999999999 89999999999999999999999999999
Q ss_pred ccccCCC----CCCceecccccccccccccccC-CCCccchHHHHHHHHHHHHhCCCCCCcccccccccCC---------
Q 004268 660 ARLLHPD----SSNRTLVVGTYGYIAPELAYTM-AVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSSSSGR--------- 725 (764)
Q Consensus 660 ~~~~~~~----~~~~~~~~g~~~y~aPE~~~~~-~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~~~~~--------- 725 (764)
|+..... .......+||+.|+|||++.+. .|+.++||||+||++|||++|++||.+.+..+.....
T Consensus 205 a~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~ 284 (398)
T 4b99_A 205 ARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSP 284 (398)
T ss_dssp CBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCG
T ss_pred eeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCh
Confidence 9876432 2233457899999999998876 4689999999999999999999999876532111000
Q ss_pred ----------------c---------CCCCCCCcHHHHHHHhhhhccc
Q 004268 726 ----------------K---------ISQNPRLDLQCNAYLKNFSQGN 748 (764)
Q Consensus 726 ----------------~---------~~~~~~~~~~~~~~~~~~l~~~ 748 (764)
. ....+.++.++.+++++||+.+
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~d 332 (398)
T 4b99_A 285 AVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFE 332 (398)
T ss_dssp GGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSS
T ss_pred HHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCC
Confidence 0 0012456889999999999988
No 36
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=1.1e-42 Score=384.19 Aligned_cols=354 Identities=20% Similarity=0.224 Sum_probs=316.0
Q ss_pred CCeeEEEeCCCCccccCCccccCCCCCcEEEcCCCcCc-ccCCccccCCCCCCEEEccCCcCcccCCcccCCCCCCCEEe
Q 004268 19 PNLVTFRIWGTLLSGRMPSEIGALSKLEKLVLSHNSLT-GRIPSEIGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLDLN 97 (764)
Q Consensus 19 ~~l~~L~l~~~~~~~~~~~~~~~l~~L~~L~Ls~n~i~-~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~ 97 (764)
++|+.|++++|.+++..|..|..+++|++|+|++|.+. .+.+..|.++++|++|+|++|++++..|..|..+++|++|+
T Consensus 30 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 109 (455)
T 3v47_A 30 AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLT 109 (455)
T ss_dssp TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEE
T ss_pred CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEe
Confidence 57999999999999999999999999999999999997 45678899999999999999999988899999999999999
Q ss_pred cCCCcccccCC--ccCcCCCCCCEEEccCCcCcccCCcc-ccCCCCcCEEecccCcccccCCccccCC--CCCCeeeccc
Q 004268 98 LSNNILNGSIP--LEFGNLKDLDQLRLQGNKLDGLIPSS-IGNLTNLTYLDLSLNQLSGRLPQEVGNL--KNLKSLFLDN 172 (764)
Q Consensus 98 L~~n~l~~~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~-~~~l~~L~~L~L~~n~l~~~~~~~~~~l--~~L~~L~L~~ 172 (764)
|++|.+++..+ ..|.++++|++|+|++|.+.++.|.. |.++++|++|+|++|+++++.+..+..+ .+|+.|++++
T Consensus 110 L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~ 189 (455)
T 3v47_A 110 LTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSS 189 (455)
T ss_dssp CTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTT
T ss_pred CCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhcccccccccccccc
Confidence 99999986443 44999999999999999999887776 8999999999999999999988888876 7899999999
Q ss_pred CCCCCCCCCc--------cccCCCccEEEecCccCcCCcccccCCc---cccceeeccCcccccc----------cCccc
Q 004268 173 NHLSGPIPST--------LYHLNQLATLCLGYNKLVGPVTKEVGNM---KNLDRLHLNGNNLTGS----------IPSTI 231 (764)
Q Consensus 173 n~i~~~~~~~--------~~~l~~L~~L~l~~n~i~~~~~~~~~~l---~~L~~L~L~~n~l~~~----------~~~~~ 231 (764)
|.+..+.+.. +..+++|++|++++|.+....+..+... ++|+.|++++|.+.+. .+..+
T Consensus 190 n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~ 269 (455)
T 3v47_A 190 ITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTF 269 (455)
T ss_dssp CBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTT
T ss_pred CcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchhhhccCccccc
Confidence 9998765543 3467899999999999987666555443 8999999999865532 12222
Q ss_pred cC--CCCCCEEEccCCcccCCCCcCCcCCCCCCeEEccCCcccCCCCccccCCCCCCeEeccCccccCCCCCCCCCCCcc
Q 004268 232 GY--LNLLDELHLSHNRLDGPIPPTIGNLTNLIALDLSSNQLSGLLPREVGNLKYLASLSLNGNILIGPIPPTIGYLTNL 309 (764)
Q Consensus 232 ~~--l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 309 (764)
.. .++|+.|++++|.+.+..+..+..+++|+.|+|++|++.+..+..|.++++|+.|++++|++.+..+..+..+++|
T Consensus 270 ~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 349 (455)
T 3v47_A 270 KGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKL 349 (455)
T ss_dssp GGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTC
T ss_pred ccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccC
Confidence 22 3689999999999999999999999999999999999999889999999999999999999998888899999999
Q ss_pred ceEEccCCcCccCCChhhhcccccceeeccccccccCCchhcccccccceeecccccccCCCC
Q 004268 310 TYLNLGYNRLSSSIPPELMNCSQLLNLVLSHNSLSGSIPSEIGNLIFFRQLDLSRNFINGTIP 372 (764)
Q Consensus 310 ~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 372 (764)
++|+|++|++++..|..|..+++|++|+|++|++++..+..+..+++|+.|+|++|++++..|
T Consensus 350 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 350 EVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp CEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred CEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCC
Confidence 999999999998889999999999999999999998777788999999999999999997665
No 37
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=3.4e-43 Score=397.96 Aligned_cols=376 Identities=21% Similarity=0.235 Sum_probs=315.0
Q ss_pred cccccccCCCeeEEEeCCCCccccCCccccCCCCCcEEEcCCCcCcccCCccccCCCCCCEEEccCCcCccc-CCcccCC
Q 004268 11 SQLNFTCFPNLVTFRIWGTLLSGRMPSEIGALSKLEKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTGT-IPSEIGS 89 (764)
Q Consensus 11 ~~~~~~~~~~l~~L~l~~~~~~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~-~~~~~~~ 89 (764)
....|.++++|+.|++++|.+++..|..|..+++|++|+|++|++++..+..|.++++|++|+|++|.+++. .+..|+.
T Consensus 42 ~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~ 121 (549)
T 2z81_A 42 GHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPN 121 (549)
T ss_dssp CSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTT
T ss_pred ChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhc
Confidence 345789999999999999999999999999999999999999999988888899999999999999999863 5678999
Q ss_pred CCCCCEEecCCCc-ccccCCccCcCCCCCCEEEccCCcCcccCCccccCCCCcCEEecccCcccccCCccccCCCCCCee
Q 004268 90 LRDLLDLNLSNNI-LNGSIPLEFGNLKDLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNLKSL 168 (764)
Q Consensus 90 l~~L~~L~L~~n~-l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 168 (764)
+++|++|+|++|. ++.+.+..|.++++|++|++++|.+++..|..+.++++|++|++++|.+..+....+..+++|++|
T Consensus 122 l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L 201 (549)
T 2z81_A 122 LTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYL 201 (549)
T ss_dssp CTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBSEE
T ss_pred cCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCceEecccCcccccchhhHhhcccccEE
Confidence 9999999999998 666666789999999999999999999888888888877777777777764443334556677777
Q ss_pred ecccCCCCCCCC---C----------------------------------------------------------------
Q 004268 169 FLDNNHLSGPIP---S---------------------------------------------------------------- 181 (764)
Q Consensus 169 ~L~~n~i~~~~~---~---------------------------------------------------------------- 181 (764)
++++|.+++... .
T Consensus 202 ~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~ 281 (549)
T 2z81_A 202 ELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELG 281 (549)
T ss_dssp EEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCT
T ss_pred EccCCccccccccccchhhhhhcccceeccccccchhHHHHHHHHhhhhccccccccccccccccccccccchhhhhhhc
Confidence 777776654210 0
Q ss_pred -----------------------ccccCCCccEEEecCccCcCCcccccCCccccceeeccCcccccccC---ccccCCC
Q 004268 182 -----------------------TLYHLNQLATLCLGYNKLVGPVTKEVGNMKNLDRLHLNGNNLTGSIP---STIGYLN 235 (764)
Q Consensus 182 -----------------------~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~---~~~~~l~ 235 (764)
.+....+|+.|++++|.+..++...+..+++|++|++++|++++..+ ..+..++
T Consensus 282 ~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~ 361 (549)
T 2z81_A 282 KVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVFLVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWP 361 (549)
T ss_dssp TCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCCCCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSST
T ss_pred ccccccccccccchhhhcccchhhhhhcccceEEEeccCccccCCHHHHhcCccccEEEccCCccccccccchhhhhccc
Confidence 01112457777788888776666666789999999999999997653 3477889
Q ss_pred CCCEEEccCCcccCCCC--cCCcCCCCCCeEEccCCcccCCCCccccCCCCCCeEeccCccccCCCCCCCCCCCccceEE
Q 004268 236 LLDELHLSHNRLDGPIP--PTIGNLTNLIALDLSSNQLSGLLPREVGNLKYLASLSLNGNILIGPIPPTIGYLTNLTYLN 313 (764)
Q Consensus 236 ~L~~L~L~~n~l~~~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 313 (764)
+|+.|+|++|.+++..+ ..+..+++|+.|+|++|+++ ..|..+..+++|+.|++++|++... +..+ .++|++|+
T Consensus 362 ~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~~l-~~~~--~~~L~~L~ 437 (549)
T 2z81_A 362 SLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIRVV-KTCI--PQTLEVLD 437 (549)
T ss_dssp TCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCSCC-CTTS--CTTCSEEE
T ss_pred cCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCc-cCChhhcccccccEEECCCCCcccc-cchh--cCCceEEE
Confidence 99999999999986532 45889999999999999999 4677889999999999999999854 3333 36899999
Q ss_pred ccCCcCccCCChhhhcccccceeeccccccccCCchhcccccccceeecccccccCCCCCCCCCCCccceecCCCCcccc
Q 004268 314 LGYNRLSSSIPPELMNCSQLLNLVLSHNSLSGSIPSEIGNLIFFRQLDLSRNFINGTIPSQLGKIPNISAVDLSKNNLSG 393 (764)
Q Consensus 314 ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~ 393 (764)
|++|++++.. ..+++|++|+|++|+++ .+|. ...+++|+.|+|++|++++..|..|..+++|+.|++++|+++|
T Consensus 438 Ls~N~l~~~~----~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 511 (549)
T 2z81_A 438 VSNNNLDSFS----LFLPRLQELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 511 (549)
T ss_dssp CCSSCCSCCC----CCCTTCCEEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCC
T ss_pred CCCCChhhhc----ccCChhcEEECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccC
Confidence 9999999642 57899999999999999 5665 4679999999999999999999999999999999999999998
Q ss_pred ccC
Q 004268 394 VIP 396 (764)
Q Consensus 394 ~~~ 396 (764)
.+|
T Consensus 512 ~~~ 514 (549)
T 2z81_A 512 SCP 514 (549)
T ss_dssp CHH
T ss_pred CCc
Confidence 887
No 38
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=3.5e-43 Score=370.04 Aligned_cols=197 Identities=27% Similarity=0.381 Sum_probs=170.8
Q ss_pred HHhhcCCcceeeeecCceeEEEEEEC----CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhc-CCCceeeEeeEEeeC
Q 004268 505 EATEDFHIKYCIGTGGYGSVYRAQLS----SGKLVALKKLHRSETEEPAFLESFQTEARLLSQI-RHRNIVKLYGFCLHN 579 (764)
Q Consensus 505 ~~~~~y~~~~~ig~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~ 579 (764)
+..++|++.+.||+|+||+||+|+.+ +++.||+|++...... .++.+|+++++.+ +||||+++++++.+.
T Consensus 18 ~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~-----~~~~~E~~~l~~~~~h~nIv~l~~~~~~~ 92 (361)
T 4f9c_A 18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHP-----IRIAAELQCLTVAGGQDNVMGVKYCFRKN 92 (361)
T ss_dssp GGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSCH-----HHHHHHHHHHHHTCSBTTBCCCSEEEEET
T ss_pred CccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccccCH-----HHHHHHHHHHHHhcCCCCCceEEEEEEEC
Confidence 35678999999999999999999753 5788999998765432 5678999999998 699999999999999
Q ss_pred CEEEEEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCC-CCEEEeeec
Q 004268 580 KCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSN-LEAFVADFG 658 (764)
Q Consensus 580 ~~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~-~~~kl~Dfg 658 (764)
+.+|+||||+++|+|.+++. .+++.+++.++.||+.||+||| ++||+||||||+|||++.+ +.+||+|||
T Consensus 93 ~~~~lvmE~~~g~~L~~~~~------~l~~~~~~~~~~qll~al~ylH---~~gIiHRDiKPeNiLl~~~~~~~kl~DFG 163 (361)
T 4f9c_A 93 DHVVIAMPYLEHESFLDILN------SLSFQEVREYMLNLFKALKRIH---QFGIVHRDVKPSNFLYNRRLKKYALVDFG 163 (361)
T ss_dssp TEEEEEEECCCCCCHHHHHT------TCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCT
T ss_pred CEEEEEEeCCCcccHHHHHc------CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCcCCHHHeEEeCCCCeEEECcCC
Confidence 99999999999999999985 3889999999999999999999 9999999999999999876 899999999
Q ss_pred cccccCCCCC----------------------------CceecccccccccccccccC-CCCccchHHHHHHHHHHHHhC
Q 004268 659 LARLLHPDSS----------------------------NRTLVVGTYGYIAPELAYTM-AVTEKCDVYSFGVVALEVLMG 709 (764)
Q Consensus 659 ~~~~~~~~~~----------------------------~~~~~~g~~~y~aPE~~~~~-~~~~~~DiwslG~il~~lltg 709 (764)
+|+....... .....+||+.|+|||++.+. .|+.++||||+||++|||+||
T Consensus 164 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G 243 (361)
T 4f9c_A 164 LAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSG 243 (361)
T ss_dssp TCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHT
T ss_pred CCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHC
Confidence 9976543211 12335799999999999876 589999999999999999999
Q ss_pred CCCCCc
Q 004268 710 SHPTDL 715 (764)
Q Consensus 710 ~~Pf~~ 715 (764)
++||..
T Consensus 244 ~~Pf~~ 249 (361)
T 4f9c_A 244 RYPFYK 249 (361)
T ss_dssp CSSSSC
T ss_pred CCCCCC
Confidence 999953
No 39
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=2.2e-42 Score=388.35 Aligned_cols=378 Identities=22% Similarity=0.255 Sum_probs=279.8
Q ss_pred eEEEeCCCCccccCCccccCCCCCcEEEcCCCcCcccCCccccCCCCCCEEEccCCcCcccCCcccCCCCCCCEEecCCC
Q 004268 22 VTFRIWGTLLSGRMPSEIGALSKLEKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLDLNLSNN 101 (764)
Q Consensus 22 ~~L~l~~~~~~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n 101 (764)
++|++++|+++ .+|..+. ++|++|+|++|.++++.|..|.++++|++|+|++|+|++..|.+|..+++|++|+|++|
T Consensus 3 ~~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 79 (520)
T 2z7x_B 3 FLVDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHN 79 (520)
T ss_dssp CEEECTTSCCS-SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSS
T ss_pred ceEecCCCCcc-ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCC
Confidence 57999999998 6777776 89999999999999888889999999999999999999888999999999999999999
Q ss_pred cccccCCccCcCCCCCCEEEccCCcCccc-CCccccCCCCcCEEecccCcccccCCccccCCCCC--CeeecccCCC--C
Q 004268 102 ILNGSIPLEFGNLKDLDQLRLQGNKLDGL-IPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNL--KSLFLDNNHL--S 176 (764)
Q Consensus 102 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L--~~L~L~~n~i--~ 176 (764)
.++.+... .+++|++|+|++|.++++ .|..|.++++|++|+|++|++++ ..|..+++| +.|++++|.+ .
T Consensus 80 ~l~~lp~~---~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~ 153 (520)
T 2z7x_B 80 KLVKISCH---PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGE 153 (520)
T ss_dssp CCCEEECC---CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTS
T ss_pred ceeecCcc---ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeeccccccc
Confidence 99965544 899999999999999975 57899999999999999999985 467778888 9999999998 5
Q ss_pred CCCCCcccc--------------------------CCCccEEEecCcc-------CcCCcccccCC--------------
Q 004268 177 GPIPSTLYH--------------------------LNQLATLCLGYNK-------LVGPVTKEVGN-------------- 209 (764)
Q Consensus 177 ~~~~~~~~~--------------------------l~~L~~L~l~~n~-------i~~~~~~~~~~-------------- 209 (764)
+..+..+.. +++|+.|++++|. +.+..+ .+..
T Consensus 154 ~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-~l~~l~~L~~L~l~~~~l 232 (520)
T 2z7x_B 154 KEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA-KLQTNPKLSNLTLNNIET 232 (520)
T ss_dssp SCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHH-GGGGCTTCCEEEEEEEEE
T ss_pred ccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchh-hhccccchhhcccccccc
Confidence 455544444 4445555554443 100000 0111
Q ss_pred -------------ccccceeeccCcccccccCccc-----cCCCC--------------------------CCEEEccCC
Q 004268 210 -------------MKNLDRLHLNGNNLTGSIPSTI-----GYLNL--------------------------LDELHLSHN 245 (764)
Q Consensus 210 -------------l~~L~~L~L~~n~l~~~~~~~~-----~~l~~--------------------------L~~L~L~~n 245 (764)
.++|++|++++|.+++..|..+ ..+++ |+.|++++|
T Consensus 233 ~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~~~p~~~~~~~~~~~~L~~L~l~~n 312 (520)
T 2z7x_B 233 TWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSGT 312 (520)
T ss_dssp EHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCCCSCTHHHHHHHHTCCCSEEEEESS
T ss_pred CHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEeccccccceecchhhhhcccccCceeEEEcCCC
Confidence 1256666666666665555544 44444 555555555
Q ss_pred cccCCCCcCCcCCCCCCeEEccCCcccCCCCccccCCCCCCeEeccCccccC--CCCCCCCCCCccceEEccCCcCccCC
Q 004268 246 RLDGPIPPTIGNLTNLIALDLSSNQLSGLLPREVGNLKYLASLSLNGNILIG--PIPPTIGYLTNLTYLNLGYNRLSSSI 323 (764)
Q Consensus 246 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~--~~~~~~~~l~~L~~L~ls~N~l~~~~ 323 (764)
.+.... .+..+++|++|++++|.+++..|..+..+++|+.|++++|++.+ ..|..+..+++|++|++++|++++.+
T Consensus 313 ~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l 390 (520)
T 2z7x_B 313 RMVHML--CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDE 390 (520)
T ss_dssp CCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCG
T ss_pred cccccc--chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCccc
Confidence 554321 12567788888888888877777777888888888888888775 33455777788888888888887634
Q ss_pred Ch-hhhcccccceeeccccccccCCchhcccccccceeecccccccCCCCCCCCCCCccceecCCCCccccccCCc---c
Q 004268 324 PP-ELMNCSQLLNLVLSHNSLSGSIPSEIGNLIFFRQLDLSRNFINGTIPSQLGKIPNISAVDLSKNNLSGVIPAS---V 399 (764)
Q Consensus 324 ~~-~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~---~ 399 (764)
|. .+..+++|++|++++|++++..|..+. ++|+.|+|++|+|+ .+|..+..+++|+.|++++|+++...+.. +
T Consensus 391 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l 467 (520)
T 2z7x_B 391 KKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKSVPDGIFDRL 467 (520)
T ss_dssp GGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTC
T ss_pred ccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCccCHHHhccC
Confidence 43 467777888888888888766665553 67888888888887 56665667888888888888888554442 3
Q ss_pred ccCccccccCCCCCC
Q 004268 400 RRIPKLIVSENNLEL 414 (764)
Q Consensus 400 ~~~~~~~~~~n~~~~ 414 (764)
+.+..+++++|++.|
T Consensus 468 ~~L~~L~l~~N~~~c 482 (520)
T 2z7x_B 468 TSLQKIWLHTNPWDC 482 (520)
T ss_dssp TTCCEEECCSSCBCC
T ss_pred CcccEEECcCCCCcc
Confidence 466777788887754
No 40
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=2.5e-43 Score=363.29 Aligned_cols=201 Identities=28% Similarity=0.420 Sum_probs=163.5
Q ss_pred hhcCCcceeeeecCceeEEEEEECCCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCC----EE
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNK----CM 582 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~----~~ 582 (764)
.++|.+.+.||+|+||+||+|++. |+.||||++...... ......|+..+.+++||||+++++++.+++ .+
T Consensus 2 ar~i~L~~~iG~G~fG~Vy~~~~~-g~~VAvK~l~~~~~~----~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~ 76 (303)
T 3hmm_A 2 ARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREER----SWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQL 76 (303)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEET-TEEEEEEEECGGGHH----HHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEE
T ss_pred CcEEEEEEEEeeCCCeEEEEEEEC-CEEEEEEEECccchh----hHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEE
Confidence 357889999999999999999885 899999998653211 122345566667889999999999998653 58
Q ss_pred EEEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhc-----CCCCcEEcCCCCCCeeecCCCCEEEeee
Q 004268 583 FLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYD-----CKPSIVHRDISSNNILLNSNLEAFVADF 657 (764)
Q Consensus 583 ~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-----~~~~iiH~Dlkp~NIll~~~~~~kl~Df 657 (764)
|+|||||++|+|.++++.. .+++..+.+++.|++.||+|||.. ++.+||||||||+|||+++++.+||+||
T Consensus 77 ~lV~Ey~~~gsL~~~l~~~----~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DF 152 (303)
T 3hmm_A 77 WLVSDYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADL 152 (303)
T ss_dssp EEEEECCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCC
T ss_pred EEEecCCCCCcHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeC
Confidence 9999999999999999743 589999999999999999999922 1239999999999999999999999999
Q ss_pred ccccccCCCCCC----ceecccccccccccccccC------CCCccchHHHHHHHHHHHHhCCCCCCcc
Q 004268 658 GLARLLHPDSSN----RTLVVGTYGYIAPELAYTM------AVTEKCDVYSFGVVALEVLMGSHPTDLL 716 (764)
Q Consensus 658 g~~~~~~~~~~~----~~~~~g~~~y~aPE~~~~~------~~~~~~DiwslG~il~~lltg~~Pf~~~ 716 (764)
|+|+........ ....+||+.|||||++.+. .++.++|||||||++|||+||.+||...
T Consensus 153 Gla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~ 221 (303)
T 3hmm_A 153 GLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIH 221 (303)
T ss_dssp TTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBC
T ss_pred CCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCcc
Confidence 999876543322 2235799999999998764 4678999999999999999998877543
No 41
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=4.4e-42 Score=388.97 Aligned_cols=361 Identities=23% Similarity=0.258 Sum_probs=215.5
Q ss_pred eEEEeCCCCccccCCccccCCCCCcEEEcCCCcCcccCCccccCCCCCCEEEccCCcCcccCCcccCCCCCCCEEecCCC
Q 004268 22 VTFRIWGTLLSGRMPSEIGALSKLEKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLDLNLSNN 101 (764)
Q Consensus 22 ~~L~l~~~~~~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n 101 (764)
+++++++|++++ +|..+. +++++|+|++|.++++.+..|.++++|++|+|++|+|++..|.+|..+++|++|+|++|
T Consensus 34 ~~l~ls~~~L~~-ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 110 (562)
T 3a79_B 34 SMVDYSNRNLTH-VPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHN 110 (562)
T ss_dssp CEEECTTSCCCS-CCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTS
T ss_pred cEEEcCCCCCcc-CCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCC
Confidence 455555555552 444332 45555555555555544455555555555555555555555555555555555555555
Q ss_pred cccccCCccCcCCCCCCEEEccCCcCcccC-CccccCCCCcCEEecccCcccccCCccccCCCCC--CeeecccCCC--C
Q 004268 102 ILNGSIPLEFGNLKDLDQLRLQGNKLDGLI-PSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNL--KSLFLDNNHL--S 176 (764)
Q Consensus 102 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~-~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L--~~L~L~~n~i--~ 176 (764)
.++.+... .+++|++|+|++|+++++. |..|.++++|++|+|++|+++.. .+.++++| ++|++++|.+ +
T Consensus 111 ~l~~lp~~---~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~~~ 184 (562)
T 3a79_B 111 RLQNISCC---PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYHIK 184 (562)
T ss_dssp CCCEECSC---CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCCCC
T ss_pred cCCccCcc---ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeeccccccc
Confidence 55533222 4555555555555555432 34555555555555555555432 23333333 5555555555 3
Q ss_pred CCCCCccccCC---------------------------------------------------------------------
Q 004268 177 GPIPSTLYHLN--------------------------------------------------------------------- 187 (764)
Q Consensus 177 ~~~~~~~~~l~--------------------------------------------------------------------- 187 (764)
+..+..+..+.
T Consensus 185 ~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~ 264 (562)
T 3a79_B 185 GGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWK 264 (562)
T ss_dssp SSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECHH
T ss_pred ccCcccccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcCcHH
Confidence 33333333322
Q ss_pred ------------CccEEEecCccCcCCccccc-----CCcc--------------------------ccceeeccCcccc
Q 004268 188 ------------QLATLCLGYNKLVGPVTKEV-----GNMK--------------------------NLDRLHLNGNNLT 224 (764)
Q Consensus 188 ------------~L~~L~l~~n~i~~~~~~~~-----~~l~--------------------------~L~~L~L~~n~l~ 224 (764)
+|++|++++|.+.+..+..+ ..++ +|++|++++|.+.
T Consensus 265 ~~~~~~~~~~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~~ 344 (562)
T 3a79_B 265 CSVKLFQFFWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFI 344 (562)
T ss_dssp HHHHHHHHHTTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCCC
T ss_pred HHHHHHHhhhcccccEEEEeccEeeccccchhhhcccccchheehhhcccceeecChhhhhhhhccCcceEEEccCCCcc
Confidence 67777777777763333332 3333 3555566666554
Q ss_pred cccCccccCCCCCCEEEccCCcccCCCCcCCcCCCCCCeEEccCCcccCCC--CccccCCCCCCeEeccCccccC-CCCC
Q 004268 225 GSIPSTIGYLNLLDELHLSHNRLDGPIPPTIGNLTNLIALDLSSNQLSGLL--PREVGNLKYLASLSLNGNILIG-PIPP 301 (764)
Q Consensus 225 ~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~--~~~~~~l~~L~~L~l~~n~l~~-~~~~ 301 (764)
... ....+++|+.|++++|.+++..|..+..+++|+.|+|++|+++++. +..+.++++|+.|++++|++.+ ..+.
T Consensus 345 ~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~ 422 (562)
T 3a79_B 345 HMV--CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDR 422 (562)
T ss_dssp CCC--CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSC
T ss_pred ccc--CccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChh
Confidence 221 1256677777777777777767777777777788888777777543 3457777777778887777776 3344
Q ss_pred CCCCCCccceEEccCCcCccCCChhhhcccccceeeccccccccCCchhcccccccceeecccccccCCCCCCCCCCCcc
Q 004268 302 TIGYLTNLTYLNLGYNRLSSSIPPELMNCSQLLNLVLSHNSLSGSIPSEIGNLIFFRQLDLSRNFINGTIPSQLGKIPNI 381 (764)
Q Consensus 302 ~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L 381 (764)
.+..+++|++|++++|++++..|..+. ++|++|+|++|+++ .+|..+..+++|+.|+|++|+++...+..|..+++|
T Consensus 423 ~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L 499 (562)
T 3a79_B 423 TCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSL 499 (562)
T ss_dssp CCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCCCCTTSTTTCTTC
T ss_pred hhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCCCCHHHHhcCCCC
Confidence 567777777788877777755444333 57777788887777 555555577777778888877774444447777777
Q ss_pred ceecCCCCccccccC
Q 004268 382 SAVDLSKNNLSGVIP 396 (764)
Q Consensus 382 ~~l~l~~N~l~~~~~ 396 (764)
+.|++++|+++|.+|
T Consensus 500 ~~L~l~~N~~~c~c~ 514 (562)
T 3a79_B 500 QYIWLHDNPWDCTCP 514 (562)
T ss_dssp CCEECCSCCBCCCHH
T ss_pred CEEEecCCCcCCCcc
Confidence 777888887776655
No 42
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=1.7e-41 Score=391.52 Aligned_cols=396 Identities=20% Similarity=0.161 Sum_probs=303.0
Q ss_pred CeeEEEeCCCCccccCCccccCCCCCcEEEcCCCcCcccCCccccCCCCCCEEEccCCcCcccCCcccCCCCCCCEEecC
Q 004268 20 NLVTFRIWGTLLSGRMPSEIGALSKLEKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLDLNLS 99 (764)
Q Consensus 20 ~l~~L~l~~~~~~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~ 99 (764)
+++.|+|++|.|++..+.+|..+++|++|+|++|+|+++.+++|.++++|++|+|++|+|++..+.+|.++++|++|+|+
T Consensus 53 ~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls 132 (635)
T 4g8a_A 53 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 132 (635)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECT
T ss_pred CCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECC
Confidence 79999999999998888999999999999999999998889999999999999999999998777899999999999999
Q ss_pred CCcccccCCccCcCCCCCCEEEccCCcCccc-CCccccCCCCcCEEecccCcccccCCccccCCCCCC----eeecccCC
Q 004268 100 NNILNGSIPLEFGNLKDLDQLRLQGNKLDGL-IPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNLK----SLFLDNNH 174 (764)
Q Consensus 100 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~----~L~L~~n~ 174 (764)
+|.++++.+..|+++++|++|+|++|.++.+ .|..+..+++|++|+|++|+++++.+..|..+.+++ .++++.|.
T Consensus 133 ~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~ 212 (635)
T 4g8a_A 133 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNP 212 (635)
T ss_dssp TSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCC
T ss_pred CCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCc
Confidence 9999988888999999999999999999865 467788999999999999999988777776544332 45555555
Q ss_pred CCCCCCCcc-----------------------------------------------------------------------
Q 004268 175 LSGPIPSTL----------------------------------------------------------------------- 183 (764)
Q Consensus 175 i~~~~~~~~----------------------------------------------------------------------- 183 (764)
++.+.+..+
T Consensus 213 l~~i~~~~~~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~ 292 (635)
T 4g8a_A 213 MNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLD 292 (635)
T ss_dssp CCEECTTTTTTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCC
T ss_pred ccccCcccccchhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhhhc
Confidence 442222111
Q ss_pred --------------------------------ccCCCccEEEecCccCcCCcccc-------------------cCCccc
Q 004268 184 --------------------------------YHLNQLATLCLGYNKLVGPVTKE-------------------VGNMKN 212 (764)
Q Consensus 184 --------------------------------~~l~~L~~L~l~~n~i~~~~~~~-------------------~~~l~~ 212 (764)
.....|+.|++.+|.+..+.... ...+++
T Consensus 293 ~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~L~~l~l~~n~~~~~~~~~~l~~ 372 (635)
T 4g8a_A 293 YYLDGIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPS 372 (635)
T ss_dssp SCEEECTTTTGGGTTCSEEEEESCEEEECGGGGSCCCCSEEEEESCEESSCCCCBCTTCCEEEEESCCSCCBCCCCBCTT
T ss_pred ccccchhhhhhhhcccccccccccccccccccccchhhhhhhcccccccCcCcccchhhhhcccccccCCCCcccccccc
Confidence 11122333333333332221111 112344
Q ss_pred cceeeccCccccc--ccCccccCCCCCCEEEccCCcccCCCCcCCcCCCCCCeEEccCCcccCC-CCccccCCCCCCeEe
Q 004268 213 LDRLHLNGNNLTG--SIPSTIGYLNLLDELHLSHNRLDGPIPPTIGNLTNLIALDLSSNQLSGL-LPREVGNLKYLASLS 289 (764)
Q Consensus 213 L~~L~L~~n~l~~--~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~~~~~~l~~L~~L~ 289 (764)
|+.|++++|.+.. ..+..+..+.+|+.|+++.|.+.. .+..+..+++|+.++++.|..... ....|..+.+++.++
T Consensus 373 L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~-~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ 451 (635)
T 4g8a_A 373 LEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLD 451 (635)
T ss_dssp CCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEE-ECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEE
T ss_pred cccchhhccccccccccccchhhhhhhhhhhcccccccc-ccccccccccccchhhhhcccccccccccccccccccccc
Confidence 4444444444431 122333344445555555554442 334566778888888887776544 345678888999999
Q ss_pred ccCccccCCCCCCCCCCCccceEEccCCcCc-cCCChhhhcccccceeeccccccccCCchhcccccccceeeccccccc
Q 004268 290 LNGNILIGPIPPTIGYLTNLTYLNLGYNRLS-SSIPPELMNCSQLLNLVLSHNSLSGSIPSEIGNLIFFRQLDLSRNFIN 368 (764)
Q Consensus 290 l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~-~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 368 (764)
++.|.+....+..+..++.|+.|++++|.+. ...|..|..+++|++|+|++|+|++..|..|.++++|++|+|++|+|+
T Consensus 452 ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~ 531 (635)
T 4g8a_A 452 ISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFF 531 (635)
T ss_dssp CTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCC
T ss_pred ccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCC
Confidence 9999998888888889999999999999754 456778889999999999999999888889999999999999999999
Q ss_pred CCCCCCCCCCCccceecCCCCccccccCCccc----cCccccccCCCCCCCC
Q 004268 369 GTIPSQLGKIPNISAVDLSKNNLSGVIPASVR----RIPKLIVSENNLELEN 416 (764)
Q Consensus 369 ~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~----~~~~~~~~~n~~~~~~ 416 (764)
+..+..|.++++|+.||+++|+|++..|..+. .+..+++++|++.|..
T Consensus 532 ~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C 583 (635)
T 4g8a_A 532 SLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTC 583 (635)
T ss_dssp BCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSG
T ss_pred CCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccC
Confidence 88888899999999999999999988887653 5677889999987753
No 43
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=3.8e-42 Score=384.53 Aligned_cols=233 Identities=24% Similarity=0.371 Sum_probs=201.0
Q ss_pred hhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEEEEE
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFLI 585 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 585 (764)
.++|++.+.||+|+||+||+|.++ +|+.||+|++..... ...+.+.+|+++|+.++||||+++++++.+.+.+|+|
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~---~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv 232 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHE---SDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMI 232 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSH---HHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEE
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccch---hhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEE
Confidence 478999999999999999999865 899999999876432 2346788999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCC--CCEEEeeecccccc
Q 004268 586 YEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSN--LEAFVADFGLARLL 663 (764)
Q Consensus 586 ~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~--~~~kl~Dfg~~~~~ 663 (764)
||||+||+|.+++.. ....+++.+++.++.||+.||+||| ++||+||||||+|||++.+ +.+||+|||+|+.+
T Consensus 233 ~E~~~gg~L~~~i~~--~~~~l~e~~~~~~~~qi~~al~ylH---~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~ 307 (573)
T 3uto_A 233 YEFMSGGELFEKVAD--EHNKMSEDEAVEYMRQVCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHL 307 (573)
T ss_dssp EECCCCCBHHHHHTC--TTSCEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCSSCEEC
T ss_pred EeecCCCcHHHHHHH--hCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCChhhccccCCCCCCEEEeeccceeEc
Confidence 999999999999864 2346899999999999999999999 8999999999999999854 89999999999987
Q ss_pred CCCCCCceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCccccccccc-------CCcCCCCCCCcHH
Q 004268 664 HPDSSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSSSS-------GRKISQNPRLDLQ 736 (764)
Q Consensus 664 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~~~-------~~~~~~~~~~~~~ 736 (764)
... ......+||+.|+|||++.+..|+.++||||+||++|+|++|++||.+.+..+... .......+.++..
T Consensus 308 ~~~-~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~ 386 (573)
T 3uto_A 308 DPK-QSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISED 386 (573)
T ss_dssp CTT-SEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCSGGGTTSCHH
T ss_pred cCC-CceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHhCCCCCCcccccCCCHH
Confidence 543 33455689999999999999999999999999999999999999998776532211 1112233568899
Q ss_pred HHHHHhhhhccc
Q 004268 737 CNAYLKNFSQGN 748 (764)
Q Consensus 737 ~~~~~~~~l~~~ 748 (764)
+.+++++||+.+
T Consensus 387 ~~dli~~~L~~d 398 (573)
T 3uto_A 387 GKDFIRKLLLAD 398 (573)
T ss_dssp HHHHHHTTSCSS
T ss_pred HHHHHHHHccCC
Confidence 999999999988
No 44
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=4.9e-41 Score=380.38 Aligned_cols=361 Identities=22% Similarity=0.239 Sum_probs=295.7
Q ss_pred CCCCCcEEEcCCCcCcccCCccccCCCCCCEEEccCCcCcccCCcccCCCCCCCEEecCCCcccccCCccCcCCCCCCEE
Q 004268 41 ALSKLEKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLDLNLSNNILNGSIPLEFGNLKDLDQL 120 (764)
Q Consensus 41 ~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 120 (764)
.+...+++++++|++++ +|..+. ++|++|+|++|.|++..+.+|..+++|++|+|++|.++++.+.+|.++++|++|
T Consensus 29 ~~~~~~~l~ls~~~L~~-ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 105 (562)
T 3a79_B 29 SNELESMVDYSNRNLTH-VPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYL 105 (562)
T ss_dssp ----CCEEECTTSCCCS-CCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEE
T ss_pred ccCCCcEEEcCCCCCcc-CCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEE
Confidence 44556899999999995 565554 799999999999998888899999999999999999999999999999999999
Q ss_pred EccCCcCcccCCccccCCCCcCEEecccCcccccC-CccccCCCCCCeeecccCCCCCCCCCccccCCCc--cEEEecCc
Q 004268 121 RLQGNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRL-PQEVGNLKNLKSLFLDNNHLSGPIPSTLYHLNQL--ATLCLGYN 197 (764)
Q Consensus 121 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~-~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L--~~L~l~~n 197 (764)
+|++|+++.+++. .+++|++|+|++|+++++. |..|.++++|++|++++|.++.. .+..+++| +.|++++|
T Consensus 106 ~Ls~N~l~~lp~~---~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n 179 (562)
T 3a79_B 106 DVSHNRLQNISCC---PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLV 179 (562)
T ss_dssp ECTTSCCCEECSC---CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEES
T ss_pred ECCCCcCCccCcc---ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeecc
Confidence 9999999977554 7999999999999999764 58999999999999999999864 35555555 99999999
Q ss_pred cC--cCCcccccCCcc----------------------------------------------------------------
Q 004268 198 KL--VGPVTKEVGNMK---------------------------------------------------------------- 211 (764)
Q Consensus 198 ~i--~~~~~~~~~~l~---------------------------------------------------------------- 211 (764)
.+ ....+..+..+.
T Consensus 180 ~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~ 259 (562)
T 3a79_B 180 SYHIKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHI 259 (562)
T ss_dssp SCCCCSSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEE
T ss_pred cccccccCcccccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCC
Confidence 98 544444443322
Q ss_pred -----------------ccceeeccCcccccccCccc-----cCC--------------------------CCCCEEEcc
Q 004268 212 -----------------NLDRLHLNGNNLTGSIPSTI-----GYL--------------------------NLLDELHLS 243 (764)
Q Consensus 212 -----------------~L~~L~L~~n~l~~~~~~~~-----~~l--------------------------~~L~~L~L~ 243 (764)
+|++|++++|.+++..|..+ ..+ .+|+.|+++
T Consensus 260 ~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~ 339 (562)
T 3a79_B 260 ETTWKCSVKLFQFFWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSIS 339 (562)
T ss_dssp EECHHHHHHHHHHHTTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEE
T ss_pred cCcHHHHHHHHHhhhcccccEEEEeccEeeccccchhhhcccccchheehhhcccceeecChhhhhhhhccCcceEEEcc
Confidence 67778888888876666554 222 347788888
Q ss_pred CCcccCCCCcCCcCCCCCCeEEccCCcccCCCCccccCCCCCCeEeccCccccCCC--CCCCCCCCccceEEccCCcCcc
Q 004268 244 HNRLDGPIPPTIGNLTNLIALDLSSNQLSGLLPREVGNLKYLASLSLNGNILIGPI--PPTIGYLTNLTYLNLGYNRLSS 321 (764)
Q Consensus 244 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~--~~~~~~l~~L~~L~ls~N~l~~ 321 (764)
+|.+.... ....+++|++|++++|.+++..+..+.++++|+.|++++|++.+.. |..+..+++|++|++++|++++
T Consensus 340 ~n~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~ 417 (562)
T 3a79_B 340 DTPFIHMV--CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNS 417 (562)
T ss_dssp SSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBS
T ss_pred CCCccccc--CccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCC
Confidence 88776432 2267899999999999999888999999999999999999998643 4568899999999999999997
Q ss_pred CCC-hhhhcccccceeeccccccccCCchhcccccccceeecccccccCCCCCCCCCCCccceecCCCCccccccCCc--
Q 004268 322 SIP-PELMNCSQLLNLVLSHNSLSGSIPSEIGNLIFFRQLDLSRNFINGTIPSQLGKIPNISAVDLSKNNLSGVIPAS-- 398 (764)
Q Consensus 322 ~~~-~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~-- 398 (764)
.+| ..+..+++|++|++++|++++..|..+. ++|+.|+|++|+|+ .+|..+..+++|+.|++++|+++...+..
T Consensus 418 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~ 494 (562)
T 3a79_B 418 HAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKSVPDGVFD 494 (562)
T ss_dssp CCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCCCCTTSTT
T ss_pred ccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCCCCHHHHh
Confidence 344 4588899999999999999877666554 68999999999999 56666669999999999999999765543
Q ss_pred -cccCccccccCCCCCCC
Q 004268 399 -VRRIPKLIVSENNLELE 415 (764)
Q Consensus 399 -~~~~~~~~~~~n~~~~~ 415 (764)
++.+..+++++|++.|.
T Consensus 495 ~l~~L~~L~l~~N~~~c~ 512 (562)
T 3a79_B 495 RLTSLQYIWLHDNPWDCT 512 (562)
T ss_dssp TCTTCCCEECCSCCBCCC
T ss_pred cCCCCCEEEecCCCcCCC
Confidence 35677888999988653
No 45
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=1.7e-40 Score=366.76 Aligned_cols=348 Identities=30% Similarity=0.450 Sum_probs=308.8
Q ss_pred ccCCCeeEEEeCCCCccccCCccccCCCCCcEEEcCCCcCcccCCccccCCCCCCEEEccCCcCcccCCcccCCCCCCCE
Q 004268 16 TCFPNLVTFRIWGTLLSGRMPSEIGALSKLEKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLD 95 (764)
Q Consensus 16 ~~~~~l~~L~l~~~~~~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~ 95 (764)
..+++++.|++.++.++. +| .+..+++|++|+|++|.+++..+ +..+++|++|++++|.+++..+ +..+++|++
T Consensus 43 ~~l~~l~~L~l~~~~i~~-l~-~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~ 116 (466)
T 1o6v_A 43 TDLDQVTTLQADRLGIKS-ID-GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTG 116 (466)
T ss_dssp HHHHTCCEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCE
T ss_pred hHhccccEEecCCCCCcc-Cc-chhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcCCCCCCE
Confidence 457899999999999974 45 48899999999999999996654 9999999999999999996544 999999999
Q ss_pred EecCCCcccccCCccCcCCCCCCEEEccCCcCcccCCccccCCCCcCEEecccCcccccCCccccCCCCCCeeecccCCC
Q 004268 96 LNLSNNILNGSIPLEFGNLKDLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNLKSLFLDNNHL 175 (764)
Q Consensus 96 L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i 175 (764)
|+|++|.++++.+ |.++++|++|++++|.+.++ ..+.++++|++|+++ |.+.... .+.++++|+.|++++|.+
T Consensus 117 L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~-~~~~~~~--~~~~l~~L~~L~l~~n~l 189 (466)
T 1o6v_A 117 LTLFNNQITDIDP--LKNLTNLNRLELSSNTISDI--SALSGLTSLQQLSFG-NQVTDLK--PLANLTTLERLDISSNKV 189 (466)
T ss_dssp EECCSSCCCCCGG--GTTCTTCSEEEEEEEEECCC--GGGTTCTTCSEEEEE-ESCCCCG--GGTTCTTCCEEECCSSCC
T ss_pred EECCCCCCCCChH--HcCCCCCCEEECCCCccCCC--hhhccCCcccEeecC-CcccCch--hhccCCCCCEEECcCCcC
Confidence 9999999997644 89999999999999999976 358999999999997 5565443 489999999999999999
Q ss_pred CCCCCCccccCCCccEEEecCccCcCCcccccCCccccceeeccCcccccccCccccCCCCCCEEEccCCcccCCCCcCC
Q 004268 176 SGPIPSTLYHLNQLATLCLGYNKLVGPVTKEVGNMKNLDRLHLNGNNLTGSIPSTIGYLNLLDELHLSHNRLDGPIPPTI 255 (764)
Q Consensus 176 ~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 255 (764)
+++ ..+..+++|++|++++|.+....+ +..+++|++|++++|.+++. ..+..+++|+.|++++|.+.+..+ +
T Consensus 190 ~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~ 261 (466)
T 1o6v_A 190 SDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--L 261 (466)
T ss_dssp CCC--GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--G
T ss_pred CCC--hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--h
Confidence 865 458999999999999999997655 77899999999999999864 468899999999999999996644 8
Q ss_pred cCCCCCCeEEccCCcccCCCCccccCCCCCCeEeccCccccCCCCCCCCCCCccceEEccCCcCccCCChhhhcccccce
Q 004268 256 GNLTNLIALDLSSNQLSGLLPREVGNLKYLASLSLNGNILIGPIPPTIGYLTNLTYLNLGYNRLSSSIPPELMNCSQLLN 335 (764)
Q Consensus 256 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~ 335 (764)
..+++|+.|++++|.+++..+ +..+++|+.|++++|++.+..+ +..+++|+.|++++|++++..| +..+++|++
T Consensus 262 ~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~ 335 (466)
T 1o6v_A 262 SGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQR 335 (466)
T ss_dssp TTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCE
T ss_pred hcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCE
Confidence 899999999999999997654 8899999999999999987654 8899999999999999997654 789999999
Q ss_pred eeccccccccCCchhcccccccceeecccccccCCCCCCCCCCCccceecCCCCccccc
Q 004268 336 LVLSHNSLSGSIPSEIGNLIFFRQLDLSRNFINGTIPSQLGKIPNISAVDLSKNNLSGV 394 (764)
Q Consensus 336 L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~ 394 (764)
|++++|++++. ..+..+++|+.|++++|++++..| +..+++|+.|++++|++++.
T Consensus 336 L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~~~~~ 390 (466)
T 1o6v_A 336 LFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTNA 390 (466)
T ss_dssp EECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG--GTTCTTCCEEECCCEEEECC
T ss_pred eECCCCccCCc--hhhccCCCCCEEeCCCCccCccch--hhcCCCCCEEeccCCcccCC
Confidence 99999999965 478999999999999999998877 89999999999999999974
No 46
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=3.5e-40 Score=380.48 Aligned_cols=387 Identities=25% Similarity=0.275 Sum_probs=326.5
Q ss_pred cccccccccCCCeeEEEeCCCCccccCCccccCCCCCcEEEcCCCcCcccCCccccCCCCCCEEEccCCcCcccCCcccC
Q 004268 9 ELSQLNFTCFPNLVTFRIWGTLLSGRMPSEIGALSKLEKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTGTIPSEIG 88 (764)
Q Consensus 9 ~~~~~~~~~~~~l~~L~l~~~~~~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~ 88 (764)
+++...|.++++|+.|+|++|.++++.+.+|..+++|++|+|++|+|+++.+..|.++++|++|+|++|+++++.+..|+
T Consensus 66 ~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~ 145 (635)
T 4g8a_A 66 HLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIG 145 (635)
T ss_dssp EECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCT
T ss_pred CCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhh
Confidence 35667899999999999999999988889999999999999999999988888999999999999999999988778899
Q ss_pred CCCCCCEEecCCCccccc-CCccCcCCCCCCEEEccCCcCcccCCccccCCCCcC----EEecccCcccccCCc------
Q 004268 89 SLRDLLDLNLSNNILNGS-IPLEFGNLKDLDQLRLQGNKLDGLIPSSIGNLTNLT----YLDLSLNQLSGRLPQ------ 157 (764)
Q Consensus 89 ~l~~L~~L~L~~n~l~~~-~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~----~L~L~~n~l~~~~~~------ 157 (764)
.+++|++|+|++|.++.+ .+..+..+++|++|+|++|+++++.+..|..+.+++ .++++.|.++.+.+.
T Consensus 146 ~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~~i~~~~~~~~~ 225 (635)
T 4g8a_A 146 HLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIR 225 (635)
T ss_dssp TCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTCE
T ss_pred cCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCcccccCcccccchh
Confidence 999999999999999865 467889999999999999999988887776554433 455555554322111
Q ss_pred --------------------------------------------------------------------------------
Q 004268 158 -------------------------------------------------------------------------------- 157 (764)
Q Consensus 158 -------------------------------------------------------------------------------- 157 (764)
T Consensus 226 ~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~ 305 (635)
T 4g8a_A 226 LHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCL 305 (635)
T ss_dssp EEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGG
T ss_pred hhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhhhcccccchhhhhhhh
Confidence
Q ss_pred -----------------cccCCCCCCeeecccCCCCCCCCC-------------------ccccCCCccEEEecCccCcC
Q 004268 158 -----------------EVGNLKNLKSLFLDNNHLSGPIPS-------------------TLYHLNQLATLCLGYNKLVG 201 (764)
Q Consensus 158 -----------------~~~~l~~L~~L~L~~n~i~~~~~~-------------------~~~~l~~L~~L~l~~n~i~~ 201 (764)
.+....+|+.|++.+|.+..+... ....+++|+.|+++.|.+..
T Consensus 306 ~~l~~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~L~~l~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~ 385 (635)
T 4g8a_A 306 TNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSF 385 (635)
T ss_dssp TTCSEEEEESCEEEECGGGGSCCCCSEEEEESCEESSCCCCBCTTCCEEEEESCCSCCBCCCCBCTTCCEEECCSSCCBE
T ss_pred cccccccccccccccccccccchhhhhhhcccccccCcCcccchhhhhcccccccCCCCcccccccccccchhhcccccc
Confidence 112233556666666655433222 22357789999999998864
Q ss_pred C--cccccCCccccceeeccCcccccccCccccCCCCCCEEEccCCcccCCC-CcCCcCCCCCCeEEccCCcccCCCCcc
Q 004268 202 P--VTKEVGNMKNLDRLHLNGNNLTGSIPSTIGYLNLLDELHLSHNRLDGPI-PPTIGNLTNLIALDLSSNQLSGLLPRE 278 (764)
Q Consensus 202 ~--~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~-~~~~~~l~~L~~L~L~~n~l~~~~~~~ 278 (764)
. .+..+..+.+|+.|++..|.... .+..+..+++|+.++++.|...... ...|..+++++.++++.|.+....+..
T Consensus 386 ~~~~~~~~~~~~~L~~L~~~~~~~~~-~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~ 464 (635)
T 4g8a_A 386 KGCCSQSDFGTISLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGI 464 (635)
T ss_dssp EEECCHHHHSCSCCCEEECCSCSEEE-ECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTT
T ss_pred ccccccchhhhhhhhhhhcccccccc-ccccccccccccchhhhhccccccccccccccccccccccccccccccccccc
Confidence 3 23445677899999999999884 4556888999999999998876554 456888999999999999999899999
Q ss_pred ccCCCCCCeEeccCccc-cCCCCCCCCCCCccceEEccCCcCccCCChhhhcccccceeeccccccccCCchhccccccc
Q 004268 279 VGNLKYLASLSLNGNIL-IGPIPPTIGYLTNLTYLNLGYNRLSSSIPPELMNCSQLLNLVLSHNSLSGSIPSEIGNLIFF 357 (764)
Q Consensus 279 ~~~l~~L~~L~l~~n~l-~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L 357 (764)
+..+++|+.|++++|.+ ....|..|..+++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|
T Consensus 465 ~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L 544 (635)
T 4g8a_A 465 FNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSL 544 (635)
T ss_dssp TTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTC
T ss_pred cccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCC
Confidence 99999999999999975 44578889999999999999999999999999999999999999999999889999999999
Q ss_pred ceeecccccccCCCCCCCCCC-CccceecCCCCccccccC
Q 004268 358 RQLDLSRNFINGTIPSQLGKI-PNISAVDLSKNNLSGVIP 396 (764)
Q Consensus 358 ~~L~l~~N~l~~~~~~~~~~l-~~L~~l~l~~N~l~~~~~ 396 (764)
+.|||++|+|++..|..|..+ ++|+.|++++|+++|.+.
T Consensus 545 ~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~ 584 (635)
T 4g8a_A 545 QVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCE 584 (635)
T ss_dssp CEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGG
T ss_pred CEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCC
Confidence 999999999999999999998 589999999999998765
No 47
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=2e-40 Score=368.03 Aligned_cols=354 Identities=21% Similarity=0.174 Sum_probs=190.8
Q ss_pred eEEEeCCCCccccCCccccCCCCCcEEEcCCCcCcccCCccccCCCCCCEEEccCCcCcccCCcccCCCCCCCEEecCCC
Q 004268 22 VTFRIWGTLLSGRMPSEIGALSKLEKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLDLNLSNN 101 (764)
Q Consensus 22 ~~L~l~~~~~~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n 101 (764)
+.+++++++++ .+|..+. +++++|+|++|+++++.+..|..+++|++|+|++|.|++..|.+|..+++|++|+|++|
T Consensus 14 ~~v~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n 90 (477)
T 2id5_A 14 RAVLCHRKRFV-AVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSN 90 (477)
T ss_dssp TEEECCSCCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcC-cCCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCC
Confidence 34555555554 3444332 35555555555555555555555555555555555555555555555555555555555
Q ss_pred cccccCCccCcCCCCCCEEEccCCcCcccCCccccCCCCcCEEecccCcccccCCccccCCCCCCeeecccCCCCCCCCC
Q 004268 102 ILNGSIPLEFGNLKDLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNLKSLFLDNNHLSGPIPS 181 (764)
Q Consensus 102 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~ 181 (764)
.++.+.+..|.++++|++|+|++|++..+.+..|.++++|++|+|++|.++.+.+..|.++++|++|+|++|.++.+
T Consensus 91 ~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~--- 167 (477)
T 2id5_A 91 RLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSI--- 167 (477)
T ss_dssp CCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSC---
T ss_pred cCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCccc---
Confidence 55544444555555555555555555555555555555555555555555555555555555555555555555544
Q ss_pred ccccCCCccEEEecCccCcCCcccccCCccccceeeccCcccccccCccccCCCCCCEEEccCCcccCCCCcCCcCCCCC
Q 004268 182 TLYHLNQLATLCLGYNKLVGPVTKEVGNMKNLDRLHLNGNNLTGSIPSTIGYLNLLDELHLSHNRLDGPIPPTIGNLTNL 261 (764)
Q Consensus 182 ~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 261 (764)
....+..+++|+.|++++|.+.+..+..|..+++|+.|++++|...+..+.......+|
T Consensus 168 ---------------------~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L 226 (477)
T 2id5_A 168 ---------------------PTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNL 226 (477)
T ss_dssp ---------------------CHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCC
T ss_pred ---------------------ChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccc
Confidence 44444444445555555555444444445555555555555544443333333334456
Q ss_pred CeEEccCCcccCCCCccccCCCCCCeEeccCccccCCCCCCCCCCCccceEEccCCcCccCCChhhhcccccceeecccc
Q 004268 262 IALDLSSNQLSGLLPREVGNLKYLASLSLNGNILIGPIPPTIGYLTNLTYLNLGYNRLSSSIPPELMNCSQLLNLVLSHN 341 (764)
Q Consensus 262 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N 341 (764)
+.|+|++|.++++.+..|..+++|+.|+|++|.+.+..+..|..+++|++|+|++|++++..|..|.++++|++|+|++|
T Consensus 227 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N 306 (477)
T 2id5_A 227 TSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGN 306 (477)
T ss_dssp SEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSS
T ss_pred cEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCC
Confidence 66666666665444445556666666666666665555555666666666666666666555566666666666666666
Q ss_pred ccccCCchhcccccccceeecccccccCCCCCCCCCCCccceecCCCCccccccCCccccCc
Q 004268 342 SLSGSIPSEIGNLIFFRQLDLSRNFINGTIPSQLGKIPNISAVDLSKNNLSGVIPASVRRIP 403 (764)
Q Consensus 342 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~ 403 (764)
++++..+..|..+++|+.|+|++|++.+..+..+ -......+++.++...|..|..+...+
T Consensus 307 ~l~~~~~~~~~~l~~L~~L~l~~N~l~c~c~~~~-~~~~~~~~~~~~~~~~C~~p~~~~g~~ 367 (477)
T 2id5_A 307 QLTTLEESVFHSVGNLETLILDSNPLACDCRLLW-VFRRRWRLNFNRQQPTCATPEFVQGKE 367 (477)
T ss_dssp CCSCCCGGGBSCGGGCCEEECCSSCEECSGGGHH-HHTTTTSSCCTTCCCBEEESGGGTTCB
T ss_pred cCceeCHhHcCCCcccCEEEccCCCccCccchHh-HHhhhhccccCccCceeCCchHHcCCc
Confidence 6665555555666666666666666653322110 011223345566666666665554433
No 48
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.9e-40 Score=368.22 Aligned_cols=304 Identities=23% Similarity=0.221 Sum_probs=231.3
Q ss_pred cCCCeeEEEeCCCCccccCCccccCCCCCcEEEcCCCcCcccCCccccCCCCCCEEEccCCcCcccCCcccCCCCCCCEE
Q 004268 17 CFPNLVTFRIWGTLLSGRMPSEIGALSKLEKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLDL 96 (764)
Q Consensus 17 ~~~~l~~L~l~~~~~~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L 96 (764)
-.++++.|++++|.+++..+..|..+++|++|+|++|.++++.|..|.++++|++|+|++|+++...+..|..+++|++|
T Consensus 30 ~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 109 (477)
T 2id5_A 30 IPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKL 109 (477)
T ss_dssp CCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEE
T ss_pred CCCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEE
Confidence 34589999999999999999999999999999999999999999999999999999999999997777789999999999
Q ss_pred ecCCCcccccCCccCcCCCCCCEEEccCCcCcccCCccccCCCCcCEEecccCcccccCCccccCCCCCCeeecccCCCC
Q 004268 97 NLSNNILNGSIPLEFGNLKDLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNLKSLFLDNNHLS 176 (764)
Q Consensus 97 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~ 176 (764)
+|++|.++.+.+..|.++++|++|+|++|.+..+.+..|.++++|++|+|++|+++++.+..|.++++|+.|+|++|.++
T Consensus 110 ~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~ 189 (477)
T 2id5_A 110 DISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNIN 189 (477)
T ss_dssp ECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCC
T ss_pred ECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCc
Confidence 99999999999999999999999999999999999999999999999999999999888888999999999999999998
Q ss_pred CCCCCccccCCCccEEEecCccCcCCcccccCCccccceeeccCcccccccCccccCCCCCCEEEccCCcccCCCCcCCc
Q 004268 177 GPIPSTLYHLNQLATLCLGYNKLVGPVTKEVGNMKNLDRLHLNGNNLTGSIPSTIGYLNLLDELHLSHNRLDGPIPPTIG 256 (764)
Q Consensus 177 ~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 256 (764)
.+.+..|..+++|+.|++++|......+.......+|++|++++|.++.+.+..+..+++|+.|+|++|.+++..+..|.
T Consensus 190 ~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~ 269 (477)
T 2id5_A 190 AIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLH 269 (477)
T ss_dssp EECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCT
T ss_pred EeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhcc
Confidence 88777888888888888888765543333333334556666666555544434455555555555555555544444555
Q ss_pred CCCCCCeEEccCCcccCCCCccccCCCCCCeEeccCccccCCCCCCCCCCCccceEEccCCcCc
Q 004268 257 NLTNLIALDLSSNQLSGLLPREVGNLKYLASLSLNGNILIGPIPPTIGYLTNLTYLNLGYNRLS 320 (764)
Q Consensus 257 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~ 320 (764)
.+++|+.|+|++|++.++.+..|.++++|+.|+|++|++++..+..|..+++|++|+|++|.+.
T Consensus 270 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 333 (477)
T 2id5_A 270 ELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLA 333 (477)
T ss_dssp TCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEE
T ss_pred ccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCcc
Confidence 5555555555555555444444444555555555555444444444444444444444444443
No 49
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=2e-40 Score=347.90 Aligned_cols=238 Identities=23% Similarity=0.309 Sum_probs=202.8
Q ss_pred hhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEEEEE
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFLI 585 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 585 (764)
.++|++.+.||+|+||+||+|+.+ +|+.||+|++.+.........+.+.+|+++++.++||||+++++++.+.+..|+|
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 83 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence 478999999999999999999865 7999999999754321122246788999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeeccccccCC
Q 004268 586 YEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLARLLHP 665 (764)
Q Consensus 586 ~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 665 (764)
|||+++|+|..++.+ ...+++..++.++.||+.||+||| ++||+||||||+||+++.++.+||+|||+++....
T Consensus 84 ~E~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 157 (337)
T 1o6l_A 84 MEYANGGELFFHLSR---ERVFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGIS 157 (337)
T ss_dssp EECCTTCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC
T ss_pred EeCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCcCCHHHEEECCCCCEEEeeccchhhccc
Confidence 999999999999873 346899999999999999999999 89999999999999999999999999999987544
Q ss_pred CCCCceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCccccccc---ccCCcCCCCCCCcHHHHHHHh
Q 004268 666 DSSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSS---SSGRKISQNPRLDLQCNAYLK 742 (764)
Q Consensus 666 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 742 (764)
........+||+.|+|||++.+..++.++||||+||++|||++|+.||.+.+.... ........+..++..+.++++
T Consensus 158 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~ 237 (337)
T 1o6l_A 158 DGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLA 237 (337)
T ss_dssp TTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHH
T ss_pred CCCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence 44445567899999999999999999999999999999999999999986554221 112233345568899999999
Q ss_pred hhhccchh
Q 004268 743 NFSQGNHR 750 (764)
Q Consensus 743 ~~l~~~~~ 750 (764)
+|++.++.
T Consensus 238 ~lL~~dP~ 245 (337)
T 1o6l_A 238 GLLKKDPK 245 (337)
T ss_dssp HHTCSSTT
T ss_pred HHhhcCHH
Confidence 99987743
No 50
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=3.1e-40 Score=352.55 Aligned_cols=240 Identities=23% Similarity=0.386 Sum_probs=203.1
Q ss_pred hhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhc-CCCceeeEeeEEeeCCEEEE
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQI-RHRNIVKLYGFCLHNKCMFL 584 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~l 584 (764)
.++|++.+.||+|+||+||+|+.+ +++.||+|++.+.........+.+.+|..+++++ +||||+++++++.+.+..|+
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 578999999999999999999865 6889999999876555444456788999999887 89999999999999999999
Q ss_pred EEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeeccccccC
Q 004268 585 IYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLARLLH 664 (764)
Q Consensus 585 v~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~ 664 (764)
||||+++|+|..++.+ ...+++..++.++.||+.||+||| ++||+||||||+||+++.++.+||+|||+++...
T Consensus 131 V~E~~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~LH---~~givHrDLKp~NILl~~~g~ikL~DFGla~~~~ 204 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQR---QRKLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL 204 (396)
T ss_dssp EEECCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCC
T ss_pred EEEcCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH---HCCEEeccCCHHHEEECCCCCEEEeecceeeecc
Confidence 9999999999999974 346899999999999999999999 8999999999999999999999999999998654
Q ss_pred CCCCCceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccccc------------cccCCcCCCCCC
Q 004268 665 PDSSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLS------------SSSGRKISQNPR 732 (764)
Q Consensus 665 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~------------~~~~~~~~~~~~ 732 (764)
.........+||+.|+|||++.+..++.++||||+||++|||++|+.||....... .........+..
T Consensus 205 ~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~ 284 (396)
T 4dc2_A 205 RPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRS 284 (396)
T ss_dssp CTTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCCCCCTT
T ss_pred cCCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccccCCCCc
Confidence 44445566789999999999999999999999999999999999999997542211 111233344566
Q ss_pred CcHHHHHHHhhhhccchhhH
Q 004268 733 LDLQCNAYLKNFSQGNHRWE 752 (764)
Q Consensus 733 ~~~~~~~~~~~~l~~~~~~~ 752 (764)
++..+.+++++|++.++.-|
T Consensus 285 ~s~~~~~li~~lL~~dP~~R 304 (396)
T 4dc2_A 285 LSVKAASVLKSFLNKDPKER 304 (396)
T ss_dssp SCHHHHHHHHHHTCSCTTTS
T ss_pred CCHHHHHHHHHHhcCCHhHc
Confidence 89999999999999874433
No 51
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=1.9e-40 Score=350.46 Aligned_cols=241 Identities=24% Similarity=0.376 Sum_probs=199.3
Q ss_pred HhhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhc-CCCceeeEeeEEeeCCEEE
Q 004268 506 ATEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQI-RHRNIVKLYGFCLHNKCMF 583 (764)
Q Consensus 506 ~~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~ 583 (764)
..++|++.+.||+|+||+||+|+.+ +|+.||+|++.+.........+.+.+|.++++.+ +||||+++++++.+.+..|
T Consensus 21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~ 100 (353)
T 3txo_A 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLF 100 (353)
T ss_dssp --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEE
Confidence 3578999999999999999999865 7899999999764332233346788999999998 7999999999999999999
Q ss_pred EEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeecccccc
Q 004268 584 LIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLARLL 663 (764)
Q Consensus 584 lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~ 663 (764)
+||||+++|+|..++.. ...+++..++.++.||+.||+||| ++||+||||||+||+++.++.+||+|||+++..
T Consensus 101 lv~E~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~ 174 (353)
T 3txo_A 101 FVMEFVNGGDLMFHIQK---SRRFDEARARFYAAEIISALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEG 174 (353)
T ss_dssp EEEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCS
T ss_pred EEEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH---HCCCcccCCCHHHEEECCCCCEEEccccceeec
Confidence 99999999999999974 346899999999999999999999 899999999999999999999999999999865
Q ss_pred CCCCCCceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCccccccc---ccCCcCCCCCCCcHHHHHH
Q 004268 664 HPDSSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSS---SSGRKISQNPRLDLQCNAY 740 (764)
Q Consensus 664 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 740 (764)
..........+||+.|+|||++.+..++.++||||+||++|||++|+.||.+.+..+. ........+..++..+.++
T Consensus 175 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~l 254 (353)
T 3txo_A 175 ICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPTWLHEDATGI 254 (353)
T ss_dssp CC---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHH
T ss_pred ccCCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHH
Confidence 5444445567899999999999999999999999999999999999999987665322 1223334455688999999
Q ss_pred HhhhhccchhhH
Q 004268 741 LKNFSQGNHRWE 752 (764)
Q Consensus 741 ~~~~l~~~~~~~ 752 (764)
+++|++.++.-|
T Consensus 255 i~~lL~~dP~~R 266 (353)
T 3txo_A 255 LKSFMTKNPTMR 266 (353)
T ss_dssp HHHHTCSSGGGS
T ss_pred HHHHhhhCHHHc
Confidence 999999874433
No 52
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=1.1e-39 Score=344.04 Aligned_cols=240 Identities=24% Similarity=0.387 Sum_probs=205.4
Q ss_pred hhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhc-CCCceeeEeeEEeeCCEEEE
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQI-RHRNIVKLYGFCLHNKCMFL 584 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~l 584 (764)
.++|++.+.||+|+||.||+|+.+ +++.||+|++...........+.+.+|..+++++ +||||+++++++.+.+..|+
T Consensus 8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 87 (345)
T 3a8x_A 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 87 (345)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEE
Confidence 478999999999999999999865 6889999999877666666667889999999998 89999999999999999999
Q ss_pred EEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeeccccccC
Q 004268 585 IYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLARLLH 664 (764)
Q Consensus 585 v~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~ 664 (764)
||||+++|+|..++.+ ...+++..++.++.||+.||+||| ++||+||||||+||+++.++.+||+|||+++...
T Consensus 88 v~e~~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~ 161 (345)
T 3a8x_A 88 VIEYVNGGDLMFHMQR---QRKLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL 161 (345)
T ss_dssp EECCCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSC
T ss_pred EEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEECCCCCEEEEecccccccc
Confidence 9999999999999973 346899999999999999999999 8999999999999999999999999999998654
Q ss_pred CCCCCceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccccc------------cccCCcCCCCCC
Q 004268 665 PDSSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLS------------SSSGRKISQNPR 732 (764)
Q Consensus 665 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~------------~~~~~~~~~~~~ 732 (764)
.........+||+.|+|||++.+..++.++||||+||++|||++|+.||....... .........+..
T Consensus 162 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~ 241 (345)
T 3a8x_A 162 RPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRS 241 (345)
T ss_dssp CTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCCCCCTT
T ss_pred CCCCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCCCCCCC
Confidence 44444556789999999999999999999999999999999999999997532110 111223334556
Q ss_pred CcHHHHHHHhhhhccchhhH
Q 004268 733 LDLQCNAYLKNFSQGNHRWE 752 (764)
Q Consensus 733 ~~~~~~~~~~~~l~~~~~~~ 752 (764)
++..+.+++++|++.++.-|
T Consensus 242 ~s~~~~~li~~lL~~dP~~R 261 (345)
T 3a8x_A 242 LSVKAASVLKSFLNKDPKER 261 (345)
T ss_dssp SCHHHHHHHHHHTCSSTTTS
T ss_pred CCHHHHHHHHHHhcCCHhHC
Confidence 88999999999999874433
No 53
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=1.7e-39 Score=336.26 Aligned_cols=232 Identities=26% Similarity=0.427 Sum_probs=201.9
Q ss_pred hhcCCcceeeeecCceeEEEEEE-CCCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEEEEE
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQL-SSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFLI 585 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 585 (764)
.++|++.+.||+|+||+||+|.+ .+++.||+|++....... .+.+.+|+.++++++||||+++++++...+..++|
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~---~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 95 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK---KELIINEILVMRENKNPNIVNYLDSYLVGDELWVV 95 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSC---HHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccH---HHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEE
Confidence 57899999999999999999985 579999999987655443 26788999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeeccccccCC
Q 004268 586 YEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLARLLHP 665 (764)
Q Consensus 586 ~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 665 (764)
|||+++++|.+++... .+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||++.....
T Consensus 96 ~e~~~~~~L~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 168 (297)
T 3fxz_A 96 MEYLAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP 168 (297)
T ss_dssp EECCTTCBHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCS
T ss_pred EECCCCCCHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHH---hCCceeCCCCHHHEEECCCCCEEEeeCCCceecCC
Confidence 9999999999999743 4889999999999999999999 88999999999999999999999999999988766
Q ss_pred CCCCceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccccccc------cCCcCCCCCCCcHHHHH
Q 004268 666 DSSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSSS------SGRKISQNPRLDLQCNA 739 (764)
Q Consensus 666 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~~------~~~~~~~~~~~~~~~~~ 739 (764)
.........||+.|+|||++.+..++.++||||+|+++|+|++|+.||......... .......+..++..+.+
T Consensus 169 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (297)
T 3fxz_A 169 EQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRD 248 (297)
T ss_dssp TTCCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSCCCSCGGGSCHHHHH
T ss_pred cccccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCccccCHHHHH
Confidence 555556678999999999999999999999999999999999999999876543211 11122334557888999
Q ss_pred HHhhhhccc
Q 004268 740 YLKNFSQGN 748 (764)
Q Consensus 740 ~~~~~l~~~ 748 (764)
++++|++.+
T Consensus 249 li~~~l~~d 257 (297)
T 3fxz_A 249 FLNRCLEMD 257 (297)
T ss_dssp HHHHHSCSS
T ss_pred HHHHHccCC
Confidence 999999987
No 54
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=1.4e-39 Score=340.75 Aligned_cols=235 Identities=27% Similarity=0.427 Sum_probs=202.3
Q ss_pred HhhcCCcceeeeecCceeEEEEEE-CCCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEEEE
Q 004268 506 ATEDFHIKYCIGTGGYGSVYRAQL-SSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFL 584 (764)
Q Consensus 506 ~~~~y~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 584 (764)
..++|++.+.||+|+||.||+|.+ .+|+.||+|++...... ....+.+.+|+++++.++||||+++++++.+.+..|+
T Consensus 13 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l 91 (328)
T 3fe3_A 13 HIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLN-PTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYL 91 (328)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred ccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEE
Confidence 357899999999999999999986 58999999999765543 3445778899999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeeccccccC
Q 004268 585 IYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLARLLH 664 (764)
Q Consensus 585 v~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~ 664 (764)
||||+++++|.+++.. ...+++..++.++.|++.||+||| ++||+||||||+||+++.++.+||+|||++....
T Consensus 92 v~e~~~~~~L~~~l~~---~~~l~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 165 (328)
T 3fe3_A 92 IMEYASGGEVFDYLVA---HGRMKEKEARSKFRQIVSAVQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFT 165 (328)
T ss_dssp EECCCTTCBHHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGS
T ss_pred EEECCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH---HCCEeccCCCHHHEEEcCCCCEEEeeccCceecC
Confidence 9999999999999973 346899999999999999999999 8999999999999999999999999999998765
Q ss_pred CCCCCceecccccccccccccccCCCC-ccchHHHHHHHHHHHHhCCCCCCcccccccc---cCCcCCCCCCCcHHHHHH
Q 004268 665 PDSSNRTLVVGTYGYIAPELAYTMAVT-EKCDVYSFGVVALEVLMGSHPTDLLSSLSSS---SGRKISQNPRLDLQCNAY 740 (764)
Q Consensus 665 ~~~~~~~~~~g~~~y~aPE~~~~~~~~-~~~DiwslG~il~~lltg~~Pf~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 740 (764)
.. ......+||+.|+|||++.+..++ +++||||+||++|+|++|+.||.+.+..... .......+...+..+.++
T Consensus 166 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~l 244 (328)
T 3fe3_A 166 VG-GKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENL 244 (328)
T ss_dssp SS-CGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHH
T ss_pred CC-CccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence 43 334456899999999999988875 7999999999999999999999876543221 122333445678999999
Q ss_pred Hhhhhccc
Q 004268 741 LKNFSQGN 748 (764)
Q Consensus 741 ~~~~l~~~ 748 (764)
+++|++.+
T Consensus 245 i~~~L~~d 252 (328)
T 3fe3_A 245 LKRFLVLN 252 (328)
T ss_dssp HHHHCCSS
T ss_pred HHHHCCCC
Confidence 99999987
No 55
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=2.9e-40 Score=357.58 Aligned_cols=242 Identities=26% Similarity=0.355 Sum_probs=198.1
Q ss_pred HHHHHhhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCC
Q 004268 502 EMIEATEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNK 580 (764)
Q Consensus 502 ~~~~~~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~ 580 (764)
++....++|++.+.||+|+||+||+|+++ +++.||+|++.+.........+.+.+|..+++.++||||+++++++.+.+
T Consensus 68 ~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~ 147 (437)
T 4aw2_A 68 QMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDN 147 (437)
T ss_dssp HHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSS
T ss_pred cccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCC
Confidence 33344679999999999999999999876 57899999986532211111234789999999999999999999999999
Q ss_pred EEEEEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeeccc
Q 004268 581 CMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLA 660 (764)
Q Consensus 581 ~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~ 660 (764)
..|+||||+++|+|.+++.+. ...+++..++.++.||+.||+||| ++||+||||||+|||++.++.+||+|||+|
T Consensus 148 ~~~lV~Ey~~gg~L~~~l~~~--~~~l~e~~~~~~~~qi~~aL~~LH---~~giiHrDLKp~NILl~~~g~vkL~DFGla 222 (437)
T 4aw2_A 148 NLYLVMDYYVGGDLLTLLSKF--EDRLPEEMARFYLAEMVIAIDSVH---QLHYVHRDIKPDNILMDMNGHIRLADFGSC 222 (437)
T ss_dssp EEEEEECCCTTCBHHHHHHTT--TTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred EEEEEEecCCCCcHHHHHHHc--cCCCCHHHHHHHHHHHHHHHHHHH---hCCeEecccCHHHeeEcCCCCEEEcchhhh
Confidence 999999999999999999742 346899999999999999999999 899999999999999999999999999999
Q ss_pred cccCCCCCC-ceecccccccccccccc-----cCCCCccchHHHHHHHHHHHHhCCCCCCcccccccccC-------CcC
Q 004268 661 RLLHPDSSN-RTLVVGTYGYIAPELAY-----TMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSSSSG-------RKI 727 (764)
Q Consensus 661 ~~~~~~~~~-~~~~~g~~~y~aPE~~~-----~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~~~~-------~~~ 727 (764)
+........ ....+||+.|+|||++. +..++.++||||+||++|||++|+.||.+.+..+.... ...
T Consensus 223 ~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~ 302 (437)
T 4aw2_A 223 LKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQF 302 (437)
T ss_dssp EECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCC
T ss_pred hhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhccccccC
Confidence 876543332 23368999999999987 55789999999999999999999999987654322111 111
Q ss_pred -CCCCCCcHHHHHHHhhhhccc
Q 004268 728 -SQNPRLDLQCNAYLKNFSQGN 748 (764)
Q Consensus 728 -~~~~~~~~~~~~~~~~~l~~~ 748 (764)
...+.++..+.+++++|+..+
T Consensus 303 p~~~~~~s~~~~dLi~~lL~~~ 324 (437)
T 4aw2_A 303 PTQVTDVSENAKDLIRRLICSR 324 (437)
T ss_dssp CSSCCCSCHHHHHHHHTTSSCG
T ss_pred CcccccCCHHHHHHHHHHhccc
Confidence 112458999999999999643
No 56
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=8e-40 Score=344.28 Aligned_cols=239 Identities=23% Similarity=0.374 Sum_probs=201.6
Q ss_pred HhhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhc-CCCceeeEeeEEeeCCEEE
Q 004268 506 ATEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQI-RHRNIVKLYGFCLHNKCMF 583 (764)
Q Consensus 506 ~~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~ 583 (764)
..++|++.+.||+|+||.||+|+++ +|+.||+|++...........+.+..|.++++.+ +||||+++++++.+.+..|
T Consensus 15 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~ 94 (345)
T 1xjd_A 15 KIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLF 94 (345)
T ss_dssp -CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred ChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEE
Confidence 4689999999999999999999875 7899999999754321111236678899999887 9999999999999999999
Q ss_pred EEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeecccccc
Q 004268 584 LIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLARLL 663 (764)
Q Consensus 584 lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~ 663 (764)
+||||+++|+|.+++.. ...+++..++.++.||+.||+||| ++||+||||||+||+++.++.+||+|||+++..
T Consensus 95 lv~E~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~ 168 (345)
T 1xjd_A 95 FVMEYLNGGDLMYHIQS---CHKFDLSRATFYAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKEN 168 (345)
T ss_dssp EEEECCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred EEEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCChhhEEECCCCCEEEeEChhhhhc
Confidence 99999999999999973 346899999999999999999999 899999999999999999999999999999865
Q ss_pred CCCCCCceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccccccc---cCCcCCCCCCCcHHHHHH
Q 004268 664 HPDSSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSSS---SGRKISQNPRLDLQCNAY 740 (764)
Q Consensus 664 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 740 (764)
..........+||+.|+|||++.+..++.++||||+||++|+|++|+.||.+.+..... .......+..++..+.++
T Consensus 169 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~l 248 (345)
T 1xjd_A 169 MLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKEAKDL 248 (345)
T ss_dssp CCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHH
T ss_pred ccCCCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHhCCCCCCcccCHHHHHH
Confidence 44444455678999999999999999999999999999999999999999876542211 112223345578999999
Q ss_pred Hhhhhccchh
Q 004268 741 LKNFSQGNHR 750 (764)
Q Consensus 741 ~~~~l~~~~~ 750 (764)
+++|++.++.
T Consensus 249 i~~lL~~dp~ 258 (345)
T 1xjd_A 249 LVKLFVREPE 258 (345)
T ss_dssp HHHHSCSSGG
T ss_pred HHHHhcCCHh
Confidence 9999998743
No 57
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=1.9e-38 Score=350.32 Aligned_cols=328 Identities=30% Similarity=0.418 Sum_probs=292.0
Q ss_pred ccccCCCeeEEEeCCCCccccCCccccCCCCCcEEEcCCCcCcccCCccccCCCCCCEEEccCCcCcccCCcccCCCCCC
Q 004268 14 NFTCFPNLVTFRIWGTLLSGRMPSEIGALSKLEKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTGTIPSEIGSLRDL 93 (764)
Q Consensus 14 ~~~~~~~l~~L~l~~~~~~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L 93 (764)
.|..+++|+.|++++|.+++..+ +..+++|++|++++|.+++..+ +..+++|++|+|++|.+++.. .+..+++|
T Consensus 63 ~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~--~~~~l~~L 136 (466)
T 1o6v_A 63 GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDID--PLKNLTNL 136 (466)
T ss_dssp TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCG--GGTTCTTC
T ss_pred chhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcCCCCCCEEECCCCCCCCCh--HHcCCCCC
Confidence 37889999999999999986544 9999999999999999996655 999999999999999999653 39999999
Q ss_pred CEEecCCCcccccCCccCcCCCCCCEEEccCCcCcccCCccccCCCCcCEEecccCcccccCCccccCCCCCCeeecccC
Q 004268 94 LDLNLSNNILNGSIPLEFGNLKDLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNLKSLFLDNN 173 (764)
Q Consensus 94 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 173 (764)
++|+|++|.++.+. .+.++++|++|+++ |.+.... .+.++++|++|++++|.++.+ ..+..+++|++|++++|
T Consensus 137 ~~L~l~~n~l~~~~--~~~~l~~L~~L~l~-~~~~~~~--~~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n 209 (466)
T 1o6v_A 137 NRLELSSNTISDIS--ALSGLTSLQQLSFG-NQVTDLK--PLANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNN 209 (466)
T ss_dssp SEEEEEEEEECCCG--GGTTCTTCSEEEEE-ESCCCCG--GGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSS
T ss_pred CEEECCCCccCCCh--hhccCCcccEeecC-CcccCch--hhccCCCCCEEECcCCcCCCC--hhhccCCCCCEEEecCC
Confidence 99999999998643 58999999999997 5565553 389999999999999999865 45899999999999999
Q ss_pred CCCCCCCCccccCCCccEEEecCccCcCCcccccCCccccceeeccCcccccccCccccCCCCCCEEEccCCcccCCCCc
Q 004268 174 HLSGPIPSTLYHLNQLATLCLGYNKLVGPVTKEVGNMKNLDRLHLNGNNLTGSIPSTIGYLNLLDELHLSHNRLDGPIPP 253 (764)
Q Consensus 174 ~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 253 (764)
.+++..+ +..+++|++|++++|.+..+ ..+..+++|++|++++|.+++..+ +..+++|+.|++++|.+++..+
T Consensus 210 ~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~- 282 (466)
T 1o6v_A 210 QISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP- 282 (466)
T ss_dssp CCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG-
T ss_pred ccccccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc-
Confidence 9987654 78899999999999999975 468889999999999999997655 8899999999999999996644
Q ss_pred CCcCCCCCCeEEccCCcccCCCCccccCCCCCCeEeccCccccCCCCCCCCCCCccceEEccCCcCccCCChhhhccccc
Q 004268 254 TIGNLTNLIALDLSSNQLSGLLPREVGNLKYLASLSLNGNILIGPIPPTIGYLTNLTYLNLGYNRLSSSIPPELMNCSQL 333 (764)
Q Consensus 254 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L 333 (764)
+..+++|+.|+|++|++.+..+ +..+++|+.|++++|++.+..| +..+++|++|++++|++++. ..+..+++|
T Consensus 283 -~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L 355 (466)
T 1o6v_A 283 -LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNI 355 (466)
T ss_dssp -GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTC
T ss_pred -ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccCCCC
Confidence 8899999999999999997654 8899999999999999998765 78999999999999999965 578999999
Q ss_pred ceeeccccccccCCchhcccccccceeecccccccCC
Q 004268 334 LNLVLSHNSLSGSIPSEIGNLIFFRQLDLSRNFINGT 370 (764)
Q Consensus 334 ~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 370 (764)
++|++++|++++..| +..+++|+.|++++|++++.
T Consensus 356 ~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~~~~~ 390 (466)
T 1o6v_A 356 NWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTNA 390 (466)
T ss_dssp CEEECCSSCCCBCGG--GTTCTTCCEEECCCEEEECC
T ss_pred CEEeCCCCccCccch--hhcCCCCCEEeccCCcccCC
Confidence 999999999998777 89999999999999999964
No 58
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.1e-39 Score=343.13 Aligned_cols=235 Identities=24% Similarity=0.369 Sum_probs=192.9
Q ss_pred HhhcCCcceeeeecCceeEEEEEE-CCCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEEEE
Q 004268 506 ATEDFHIKYCIGTGGYGSVYRAQL-SSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFL 584 (764)
Q Consensus 506 ~~~~y~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 584 (764)
..++|++.+.||+|+||+||+|.+ .+|+.||+|++....... ..+.+.+|++++++++||||+++++++.+.+..++
T Consensus 8 l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~--~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~l 85 (347)
T 3zgw_A 8 LLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGS--DLPRIKTEIEALKNLRHQHICQLYHVLETANKIFM 85 (347)
T ss_dssp TTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC-----CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred HhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccch--HHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEE
Confidence 468999999999999999999986 489999999987655432 23678899999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeeccccccC
Q 004268 585 IYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLARLLH 664 (764)
Q Consensus 585 v~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~ 664 (764)
||||+++++|.+++.. ...+++..++.++.||+.||+||| ++||+||||||+||++++++.+||+|||++....
T Consensus 86 v~E~~~gg~L~~~l~~---~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~kL~DFG~a~~~~ 159 (347)
T 3zgw_A 86 VLEYCPGGELFDYIIS---QDRLSEEETRVVFRQIVSAVAYVH---SQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPK 159 (347)
T ss_dssp EEECCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBC--
T ss_pred EEeCCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCccHHHEEEcCCCCEEEEeccCccccc
Confidence 9999999999999973 346899999999999999999999 8999999999999999999999999999987654
Q ss_pred CCC-CCceecccccccccccccccCCC-CccchHHHHHHHHHHHHhCCCCCCccccccc---ccCCcCCCCCCCcHHHHH
Q 004268 665 PDS-SNRTLVVGTYGYIAPELAYTMAV-TEKCDVYSFGVVALEVLMGSHPTDLLSSLSS---SSGRKISQNPRLDLQCNA 739 (764)
Q Consensus 665 ~~~-~~~~~~~g~~~y~aPE~~~~~~~-~~~~DiwslG~il~~lltg~~Pf~~~~~~~~---~~~~~~~~~~~~~~~~~~ 739 (764)
... ......+||+.|+|||++.+..+ +.++||||+||++|+|++|+.||.+...... ........+..++..+.+
T Consensus 160 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~ 239 (347)
T 3zgw_A 160 GNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYDVPKWLSPSSIL 239 (347)
T ss_dssp ------------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTCCHHHHH
T ss_pred CCCCccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHH
Confidence 332 22345679999999999998876 8899999999999999999999987654322 122233445567899999
Q ss_pred HHhhhhccc
Q 004268 740 YLKNFSQGN 748 (764)
Q Consensus 740 ~~~~~l~~~ 748 (764)
++++|++.+
T Consensus 240 li~~~L~~d 248 (347)
T 3zgw_A 240 LLQQMLQVD 248 (347)
T ss_dssp HHHHHTCSS
T ss_pred HHHHHcccC
Confidence 999999987
No 59
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=6.7e-40 Score=345.99 Aligned_cols=238 Identities=21% Similarity=0.316 Sum_probs=202.0
Q ss_pred HhhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhc-CCCceeeEeeEEeeCCEEE
Q 004268 506 ATEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQI-RHRNIVKLYGFCLHNKCMF 583 (764)
Q Consensus 506 ~~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~ 583 (764)
..++|++.+.||+|+||+||+|+.+ +++.||+|++...........+.+..|.++++.+ +||+|+++++++.+.+..|
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~ 97 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 97 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence 3578999999999999999999876 5889999998764322222246778999999888 7999999999999999999
Q ss_pred EEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeecccccc
Q 004268 584 LIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLARLL 663 (764)
Q Consensus 584 lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~ 663 (764)
+||||++||+|.+++.. ...+++..++.++.||+.||+||| ++||+||||||+||+++.++.+||+|||+++..
T Consensus 98 lv~E~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~ 171 (353)
T 2i0e_A 98 FVMEYVNGGDLMYHIQQ---VGRFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKEN 171 (353)
T ss_dssp EEEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred EEEeCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH---HCCEEeccCCHHHEEEcCCCcEEEEeCCccccc
Confidence 99999999999999973 346899999999999999999999 899999999999999999999999999999865
Q ss_pred CCCCCCceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCccccccc---ccCCcCCCCCCCcHHHHHH
Q 004268 664 HPDSSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSS---SSGRKISQNPRLDLQCNAY 740 (764)
Q Consensus 664 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 740 (764)
..........+||+.|+|||++.+..++.++||||+||++|||++|+.||.+.+..+. ........+..++..+.++
T Consensus 172 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~l 251 (353)
T 2i0e_A 172 IWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVAI 251 (353)
T ss_dssp CCTTCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHH
T ss_pred ccCCcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence 4444445567899999999999999999999999999999999999999987654221 1222333456689999999
Q ss_pred Hhhhhccch
Q 004268 741 LKNFSQGNH 749 (764)
Q Consensus 741 ~~~~l~~~~ 749 (764)
+++|++.++
T Consensus 252 i~~lL~~dP 260 (353)
T 2i0e_A 252 CKGLMTKHP 260 (353)
T ss_dssp HHHHTCSCT
T ss_pred HHHHhhcCH
Confidence 999999773
No 60
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=2e-39 Score=337.95 Aligned_cols=233 Identities=27% Similarity=0.438 Sum_probs=199.6
Q ss_pred hhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEEEEE
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFLI 585 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 585 (764)
.++|++.+.||+|+||+||+|+.+ +|+.||+|++.+.........+.+.+|..+++.++||||+++++++.+....|+|
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 84 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI 84 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence 478999999999999999999865 7999999998754322222246778999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeeccccccCC
Q 004268 586 YEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLARLLHP 665 (764)
Q Consensus 586 ~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 665 (764)
|||+++|+|.+++.. ...+++..++.++.||+.||+||| ++||+||||||+||+++.++.+||+|||+++....
T Consensus 85 ~e~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~ 158 (318)
T 1fot_A 85 MDYIEGGELFSLLRK---SQRFPNPVAKFYAAEVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD 158 (318)
T ss_dssp ECCCCSCBHHHHHHH---TSSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECTTSCEEECCCSSCEECSS
T ss_pred EeCCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChheEEEcCCCCEEEeecCcceecCC
Confidence 999999999999974 346899999999999999999999 99999999999999999999999999999987543
Q ss_pred CCCCceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCccccccc---ccCCcCCCCCCCcHHHHHHHh
Q 004268 666 DSSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSS---SSGRKISQNPRLDLQCNAYLK 742 (764)
Q Consensus 666 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 742 (764)
. ....+||+.|+|||++.+..++.++||||+||++|+|++|+.||.+.+.... ........++.++..+.++++
T Consensus 159 ~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~ 235 (318)
T 1fot_A 159 V---TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPPFFNEDVKDLLS 235 (318)
T ss_dssp C---BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHH
T ss_pred c---cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence 2 2346799999999999999999999999999999999999999986654221 112233345668899999999
Q ss_pred hhhccc
Q 004268 743 NFSQGN 748 (764)
Q Consensus 743 ~~l~~~ 748 (764)
+|++.+
T Consensus 236 ~lL~~d 241 (318)
T 1fot_A 236 RLITRD 241 (318)
T ss_dssp HHTCSC
T ss_pred HHhccC
Confidence 999877
No 61
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=4.9e-39 Score=334.40 Aligned_cols=241 Identities=29% Similarity=0.450 Sum_probs=196.4
Q ss_pred HhhcCCcceeeeecCceeEEEEEECCCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEEEEE
Q 004268 506 ATEDFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFLI 585 (764)
Q Consensus 506 ~~~~y~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 585 (764)
..++|++.+.||+|+||+||+|+.. |+.||+|++...... ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 35 ~~~~y~i~~~lG~G~~g~V~~~~~~-~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 3p86_A 35 PWCDLNIKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFH-AERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIV 112 (309)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEECCCCCS-HHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEE
T ss_pred ChhHceeeeEeecCCCeEEEEEEEC-CCcEEEEEecCCCCC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEE
Confidence 4678999999999999999999874 889999998765543 34457889999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCC--cEEcCCCCCCeeecCCCCEEEeeecccccc
Q 004268 586 YEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPS--IVHRDISSNNILLNSNLEAFVADFGLARLL 663 (764)
Q Consensus 586 ~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~--iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~ 663 (764)
|||+++++|.+++........+++..+..++.|++.||+||| ++| |+||||||+||+++.++.+||+|||+++..
T Consensus 113 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~ 189 (309)
T 3p86_A 113 TEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH---NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLK 189 (309)
T ss_dssp EECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHH---TSSSCCCCTTCCGGGEEECTTCCEEECCCC-----
T ss_pred EecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHH---cCCCCEECCCCChhhEEEeCCCcEEECCCCCCccc
Confidence 999999999999986544445899999999999999999999 889 999999999999999999999999999865
Q ss_pred CCCCCCceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccccccc-----cCCcCCCCCCCcHHHH
Q 004268 664 HPDSSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSSS-----SGRKISQNPRLDLQCN 738 (764)
Q Consensus 664 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~~-----~~~~~~~~~~~~~~~~ 738 (764)
...........||+.|+|||++.+..++.++||||+|+++|+|++|+.||......... .......+..++..+.
T Consensus 190 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 269 (309)
T 3p86_A 190 ASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNPQVA 269 (309)
T ss_dssp ------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHHSCCCCCCCTTSCHHHH
T ss_pred cccccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCccCCHHHH
Confidence 54433344567999999999999999999999999999999999999999876653221 2223344566789999
Q ss_pred HHHhhhhccchhh
Q 004268 739 AYLKNFSQGNHRW 751 (764)
Q Consensus 739 ~~~~~~l~~~~~~ 751 (764)
+++++|++.++.-
T Consensus 270 ~li~~~l~~dP~~ 282 (309)
T 3p86_A 270 AIIEGCWTNEPWK 282 (309)
T ss_dssp HHHHHHTCSSGGG
T ss_pred HHHHHHccCChhh
Confidence 9999999987443
No 62
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=3e-38 Score=345.60 Aligned_cols=344 Identities=20% Similarity=0.214 Sum_probs=249.8
Q ss_pred cccccccCCCeeEEEeCCCCccccCCccccCCCCCcEEEcCCCcCcccCCccccCCCCCCEEEccCCcCcccCCcccCCC
Q 004268 11 SQLNFTCFPNLVTFRIWGTLLSGRMPSEIGALSKLEKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTGTIPSEIGSL 90 (764)
Q Consensus 11 ~~~~~~~~~~l~~L~l~~~~~~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l 90 (764)
....|..+++|+.|++++|.+++. | .+..+++|++|+|++|+++++ | +..+++|++|+|++|++++. + ++.+
T Consensus 34 ~~~~~~~l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l 105 (457)
T 3bz5_A 34 DTISEEQLATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPL 105 (457)
T ss_dssp SEEEHHHHTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTC
T ss_pred cccChhHcCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCC
Confidence 344678889999999999999865 4 789999999999999999975 3 88999999999999999964 3 8899
Q ss_pred CCCCEEecCCCcccccCCccCcCCCCCCEEEccCCcCcccCCccccCCCCcCEEecccCcccccCCccccCCCCCCeeec
Q 004268 91 RDLLDLNLSNNILNGSIPLEFGNLKDLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNLKSLFL 170 (764)
Q Consensus 91 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 170 (764)
++|++|+|++|.++++ + +..+++|++|++++|+++++ .+.++++|++|++++|+..+.. .+..+++|++|++
T Consensus 106 ~~L~~L~L~~N~l~~l-~--~~~l~~L~~L~l~~N~l~~l---~l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~l 177 (457)
T 3bz5_A 106 TKLTYLNCDTNKLTKL-D--VSQNPLLTYLNCARNTLTEI---DVSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDC 177 (457)
T ss_dssp TTCCEEECCSSCCSCC-C--CTTCTTCCEEECTTSCCSCC---CCTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEEC
T ss_pred CcCCEEECCCCcCCee-c--CCCCCcCCEEECCCCcccee---ccccCCcCCEEECCCCCccccc--ccccCCcCCEEEC
Confidence 9999999999999865 3 88999999999999999986 3788999999999999543333 5888999999999
Q ss_pred ccCCCCCCCCCccccCCCccEEEecCccCcCCcccccCCccccceeeccCcccccccCccccCCCCCCEEEccCCcccCC
Q 004268 171 DNNHLSGPIPSTLYHLNQLATLCLGYNKLVGPVTKEVGNMKNLDRLHLNGNNLTGSIPSTIGYLNLLDELHLSHNRLDGP 250 (764)
Q Consensus 171 ~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 250 (764)
++|+++++. +..+++|+.|++++|+++.+ .+..+++|++|++++|+++++ | +..+++|+.|++++|.+++.
T Consensus 178 s~n~l~~l~---l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~i-p--~~~l~~L~~L~l~~N~l~~~ 248 (457)
T 3bz5_A 178 SFNKITELD---VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTEI-D--VTPLTQLTYFDCSVNPLTEL 248 (457)
T ss_dssp CSSCCCCCC---CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC
T ss_pred CCCccceec---cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCccccc-C--ccccCCCCEEEeeCCcCCCc
Confidence 999998753 78889999999999999876 478889999999999999974 4 78889999999999999977
Q ss_pred CCcCCcCCC-------CCCeEEccCCcccCCCCccccCCCCCCeEeccCccccCCCCC--------CCCCCCccceEEcc
Q 004268 251 IPPTIGNLT-------NLIALDLSSNQLSGLLPREVGNLKYLASLSLNGNILIGPIPP--------TIGYLTNLTYLNLG 315 (764)
Q Consensus 251 ~~~~~~~l~-------~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~--------~~~~l~~L~~L~ls 315 (764)
.+..+..+. +|+.|++++|.+.+..| +..+++|+.|++++|...+.+|. .+..+++|++|+++
T Consensus 249 ~~~~l~~L~~L~l~~n~L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~~~~~L~~L~l~~~~~L~~L~L~ 326 (457)
T 3bz5_A 249 DVSTLSKLTTLHCIQTDLLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDCQAAGITELDLSQNPKLVYLYLN 326 (457)
T ss_dssp CCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEECT
T ss_pred CHHHCCCCCEEeccCCCCCEEECCCCccCCccc--ccccccCCEEECCCCcccceeccCCCcceEechhhcccCCEEECC
Confidence 554444333 34444444444433332 45667778888877765443332 13344455555555
Q ss_pred CCcCccCCChhhhcccccceeeccccccccCCchhcccccccceeecccccccCCCCCCCCCCCccceecCCCCcccccc
Q 004268 316 YNRLSSSIPPELMNCSQLLNLVLSHNSLSGSIPSEIGNLIFFRQLDLSRNFINGTIPSQLGKIPNISAVDLSKNNLSGVI 395 (764)
Q Consensus 316 ~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~ 395 (764)
+|++++. + +..+++|+.|++++|++++ ++.|..|++++|.+.+. ..+..|..+++++|+++|.+
T Consensus 327 ~N~l~~l-~--l~~l~~L~~L~l~~N~l~~--------l~~L~~L~l~~n~l~g~-----~~~~~l~~l~l~~N~l~g~i 390 (457)
T 3bz5_A 327 NTELTEL-D--VSHNTKLKSLSCVNAHIQD--------FSSVGKIPALNNNFEAE-----GQTITMPKETLTNNSLTIAV 390 (457)
T ss_dssp TCCCSCC-C--CTTCTTCSEEECCSSCCCB--------CTTGGGSSGGGTSEEEE-----EEEEECCCBCCBTTBEEEEC
T ss_pred CCccccc-c--cccCCcCcEEECCCCCCCC--------ccccccccccCCcEEec-----ceeeecCccccccCcEEEEc
Confidence 5555542 1 4455555555555555553 12344445555555433 12334455555555555555
Q ss_pred CC
Q 004268 396 PA 397 (764)
Q Consensus 396 ~~ 397 (764)
|.
T Consensus 391 p~ 392 (457)
T 3bz5_A 391 SP 392 (457)
T ss_dssp CT
T ss_pred Ch
Confidence 54
No 63
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=5.8e-40 Score=352.55 Aligned_cols=237 Identities=23% Similarity=0.359 Sum_probs=197.0
Q ss_pred HHhhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEEE
Q 004268 505 EATEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCMF 583 (764)
Q Consensus 505 ~~~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 583 (764)
...++|++.+.||+|+||+||+|+++ +++.||+|++.+.........+.+.+|+.+++.++||||+++++++.+.+..|
T Consensus 66 ~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~ 145 (410)
T 3v8s_A 66 MKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLY 145 (410)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred cCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEE
Confidence 34678999999999999999999865 68999999986522111111245778999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeecccccc
Q 004268 584 LIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLARLL 663 (764)
Q Consensus 584 lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~ 663 (764)
+||||++||+|.++++. ..+++..++.++.||+.||+||| ++||+||||||+||+++.++.+||+|||+++..
T Consensus 146 lV~E~~~gg~L~~~l~~----~~~~e~~~~~~~~qi~~aL~~LH---~~givHrDLKp~NILl~~~g~ikL~DFG~a~~~ 218 (410)
T 3v8s_A 146 MVMEYMPGGDLVNLMSN----YDVPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKM 218 (410)
T ss_dssp EEECCCTTEEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEeCCCCCcHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeeECCCCCEEEeccceeEee
Confidence 99999999999999864 24889999999999999999999 899999999999999999999999999999876
Q ss_pred CCCCC-CceecccccccccccccccCC----CCccchHHHHHHHHHHHHhCCCCCCcccccccccC-------CcCCCCC
Q 004268 664 HPDSS-NRTLVVGTYGYIAPELAYTMA----VTEKCDVYSFGVVALEVLMGSHPTDLLSSLSSSSG-------RKISQNP 731 (764)
Q Consensus 664 ~~~~~-~~~~~~g~~~y~aPE~~~~~~----~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~~~~-------~~~~~~~ 731 (764)
..... .....+||+.|+|||++.+.. ++.++||||+||++|||++|+.||.+.+....... ......+
T Consensus 219 ~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~ 298 (410)
T 3v8s_A 219 NKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDN 298 (410)
T ss_dssp CTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCCTTC
T ss_pred ccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhccccccCCCcc
Confidence 54322 223568999999999998765 78899999999999999999999987654322111 2233345
Q ss_pred CCcHHHHHHHhhhhccc
Q 004268 732 RLDLQCNAYLKNFSQGN 748 (764)
Q Consensus 732 ~~~~~~~~~~~~~l~~~ 748 (764)
.++..+.++++.|++..
T Consensus 299 ~~s~~~~~li~~lL~~~ 315 (410)
T 3v8s_A 299 DISKEAKNLICAFLTDR 315 (410)
T ss_dssp CCCHHHHHHHHHHSSCG
T ss_pred cccHHHHHHHHHHccCh
Confidence 68999999999999744
No 64
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=5e-39 Score=332.28 Aligned_cols=237 Identities=28% Similarity=0.410 Sum_probs=199.4
Q ss_pred hhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEEEEE
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFLI 585 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 585 (764)
.++|++.+.||+|+||+||+|++. +++.||+|++...........+.+.+|+.++++++||||+++++++.+.+..|+|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 89 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV 89 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence 578999999999999999999865 7899999999777666667778899999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeeccccccCC
Q 004268 586 YEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLARLLHP 665 (764)
Q Consensus 586 ~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 665 (764)
|||+++++|.+++.. ...+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||.+.....
T Consensus 90 ~e~~~g~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 163 (294)
T 4eqm_A 90 MEYIEGPTLSEYIES---HGPLSVDTAINFTNQILDGIKHAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSE 163 (294)
T ss_dssp EECCCSCBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC--
T ss_pred EeCCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEEeCCCcccccc
Confidence 999999999999974 346899999999999999999999 89999999999999999999999999999987643
Q ss_pred CCC-CceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccccccccC--------CcCCCCCCCcHH
Q 004268 666 DSS-NRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSSSSG--------RKISQNPRLDLQ 736 (764)
Q Consensus 666 ~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~~~~--------~~~~~~~~~~~~ 736 (764)
... ......||+.|+|||++.+..++.++||||+|+++|+|++|+.||.+......... ......+.++..
T Consensus 164 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (294)
T 4eqm_A 164 TSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQS 243 (294)
T ss_dssp -----------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHSSCCCCHHHHSCTTSCHH
T ss_pred ccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhhccCCCcchhcccCCCHH
Confidence 322 22345789999999999999999999999999999999999999987664321111 111234567889
Q ss_pred HHHHHhhhhccch
Q 004268 737 CNAYLKNFSQGNH 749 (764)
Q Consensus 737 ~~~~~~~~l~~~~ 749 (764)
+.+++.+|++.++
T Consensus 244 l~~li~~~l~~dp 256 (294)
T 4eqm_A 244 LSNVILRATEKDK 256 (294)
T ss_dssp HHHHHHHHSCSSG
T ss_pred HHHHHHHHhcCCH
Confidence 9999999999873
No 65
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=2.4e-39 Score=344.18 Aligned_cols=237 Identities=24% Similarity=0.360 Sum_probs=194.7
Q ss_pred hhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHH-HHhcCCCceeeEeeEEeeCCEEEE
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARL-LSQIRHRNIVKLYGFCLHNKCMFL 584 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~-l~~l~hpniv~~~~~~~~~~~~~l 584 (764)
.++|++.+.||+|+||.||+|+.+ +++.||+|++.+...........+.+|..+ ++.++||||+++++++.+.+..|+
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l 116 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF 116 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence 578999999999999999999865 688999999987655444444566777776 567899999999999999999999
Q ss_pred EEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeeccccccC
Q 004268 585 IYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLARLLH 664 (764)
Q Consensus 585 v~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~ 664 (764)
||||++||+|.+++.+ ...+++..++.++.||+.||+||| ++||+||||||+||+++.+|.+||+|||+++...
T Consensus 117 v~E~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~ 190 (373)
T 2r5t_A 117 VLDYINGGELFYHLQR---ERCFLEPRARFYAAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENI 190 (373)
T ss_dssp EEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCCBCGGGB
T ss_pred EEeCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEECCCCCEEEeeCccccccc
Confidence 9999999999999974 346889999999999999999999 8999999999999999999999999999998754
Q ss_pred CCCCCceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCccccccc---ccCCcCCCCCCCcHHHHHHH
Q 004268 665 PDSSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSS---SSGRKISQNPRLDLQCNAYL 741 (764)
Q Consensus 665 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 741 (764)
.........+||+.|+|||++.+..++.++||||+||++|||++|+.||.+.+..+. ........++.++..+.+++
T Consensus 191 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li 270 (373)
T 2r5t_A 191 EHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPNITNSARHLL 270 (373)
T ss_dssp CCCCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHHHHSCCCCCSSSCHHHHHHH
T ss_pred cCCCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Confidence 444445567899999999999999999999999999999999999999987654322 12223344567899999999
Q ss_pred hhhhccch
Q 004268 742 KNFSQGNH 749 (764)
Q Consensus 742 ~~~l~~~~ 749 (764)
++|++.+.
T Consensus 271 ~~lL~~dp 278 (373)
T 2r5t_A 271 EGLLQKDR 278 (373)
T ss_dssp HHHTCSSG
T ss_pred HHHcccCH
Confidence 99999873
No 66
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=3.8e-39 Score=343.05 Aligned_cols=237 Identities=26% Similarity=0.394 Sum_probs=200.4
Q ss_pred hhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEEEEE
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFLI 585 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 585 (764)
.++|++.+.||+|+||.||+|+.. +++.||+|++...........+.+.+|+++++.++||||+++++++.+.+..|+|
T Consensus 14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv 93 (384)
T 4fr4_A 14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMV 93 (384)
T ss_dssp GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 478999999999999999999865 6899999998654322222346788999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeeccccccCC
Q 004268 586 YEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLARLLHP 665 (764)
Q Consensus 586 ~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 665 (764)
|||+.+|+|..++.. ...+++..++.++.||+.||+||| ++||+||||||+||+++.++.+||+|||++.....
T Consensus 94 ~e~~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 167 (384)
T 4fr4_A 94 VDLLLGGDLRYHLQQ---NVHFKEETVKLFICELVMALDYLQ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPR 167 (384)
T ss_dssp ECCCTTEEHHHHHHT---TCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EecCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCcHHHeEECCCCCEEEeccceeeeccC
Confidence 999999999999974 446899999999999999999999 89999999999999999999999999999987653
Q ss_pred CCCCceeccccccccccccccc---CCCCccchHHHHHHHHHHHHhCCCCCCccccccc------ccCCcCCCCCCCcHH
Q 004268 666 DSSNRTLVVGTYGYIAPELAYT---MAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSS------SSGRKISQNPRLDLQ 736 (764)
Q Consensus 666 ~~~~~~~~~g~~~y~aPE~~~~---~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~------~~~~~~~~~~~~~~~ 736 (764)
. ......+||+.|+|||++.+ ..++.++||||+||++|+|++|+.||........ ........+..++..
T Consensus 168 ~-~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~p~~~s~~ 246 (384)
T 4fr4_A 168 E-TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYPSAWSQE 246 (384)
T ss_dssp T-CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHHCCCCCCTTSCHH
T ss_pred C-CceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhhcccCCCCcCCHH
Confidence 3 33455689999999999874 4589999999999999999999999975443211 112233445667899
Q ss_pred HHHHHhhhhccchh
Q 004268 737 CNAYLKNFSQGNHR 750 (764)
Q Consensus 737 ~~~~~~~~l~~~~~ 750 (764)
+.+++++|++.++.
T Consensus 247 ~~~li~~lL~~dP~ 260 (384)
T 4fr4_A 247 MVSLLKKLLEPNPD 260 (384)
T ss_dssp HHHHHHHHSCSSGG
T ss_pred HHHHHHHHhcCCHh
Confidence 99999999998733
No 67
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=3e-39 Score=341.16 Aligned_cols=234 Identities=22% Similarity=0.331 Sum_probs=200.7
Q ss_pred hhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEEEEE
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFLI 585 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 585 (764)
.++|++.+.||+|+||.||+|+.. +|+.||+|++...........+.+.+|+++++.++||||+++++++.+.+..|+|
T Consensus 40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 119 (350)
T 1rdq_E 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEE
Confidence 478999999999999999999865 7999999998654322222346788999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeeccccccCC
Q 004268 586 YEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLARLLHP 665 (764)
Q Consensus 586 ~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 665 (764)
|||+++|+|.+++.+ ...+++..++.++.||+.||+||| ++||+||||||+||+++.++.+||+|||+++....
T Consensus 120 ~e~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~ 193 (350)
T 1rdq_E 120 MEYVAGGEMFSHLRR---IGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193 (350)
T ss_dssp EECCTTCBHHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred EcCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCccceEEECCCCCEEEcccccceeccC
Confidence 999999999999974 345899999999999999999999 89999999999999999999999999999987643
Q ss_pred CCCCceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCccccccc---ccCCcCCCCCCCcHHHHHHHh
Q 004268 666 DSSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSS---SSGRKISQNPRLDLQCNAYLK 742 (764)
Q Consensus 666 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 742 (764)
. ....+||+.|+|||++.+..++.++||||+||++|+|++|+.||.+.+.... ........+..++..+.++++
T Consensus 194 ~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~ 270 (350)
T 1rdq_E 194 R---TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLR 270 (350)
T ss_dssp C---BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTCCHHHHHHHH
T ss_pred C---cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence 2 2346799999999999999999999999999999999999999987654222 112233345568899999999
Q ss_pred hhhccch
Q 004268 743 NFSQGNH 749 (764)
Q Consensus 743 ~~l~~~~ 749 (764)
+|++.++
T Consensus 271 ~lL~~dp 277 (350)
T 1rdq_E 271 NLLQVDL 277 (350)
T ss_dssp HHSCSCT
T ss_pred HHhhcCH
Confidence 9999773
No 68
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=2.3e-38 Score=341.59 Aligned_cols=332 Identities=20% Similarity=0.176 Sum_probs=209.4
Q ss_pred CCCCcEEEcCCCcCcccCCccccCCCCCCEEEccCCcCcccCCcccCCCCCCCEEecCCCcccccCCccCcCCCCCCEEE
Q 004268 42 LSKLEKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLDLNLSNNILNGSIPLEFGNLKDLDQLR 121 (764)
Q Consensus 42 l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 121 (764)
+++++.|++++|.++.+.+..|..+++|++|+|++|.++...+..|..+++|++|+|++|.++++.+..|.++++|++|+
T Consensus 44 l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 123 (390)
T 3o6n_A 44 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 123 (390)
T ss_dssp GCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred cCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEE
Confidence 45666666666666655555566666666666666666655555666666666666666666666666666666666666
Q ss_pred ccCCcCcccCCccccCCCCcCEEecccCcccccCCccccCCCCCCeeecccCCCCCCCCCccccCCCccEEEecCccCcC
Q 004268 122 LQGNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNLKSLFLDNNHLSGPIPSTLYHLNQLATLCLGYNKLVG 201 (764)
Q Consensus 122 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~ 201 (764)
|++|+++.+++..|.++++|++|+|++|+++++.+..|.++++|++|++++|.++.+ .+..+++|+.|++++|.+..
T Consensus 124 L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~l~~ 200 (390)
T 3o6n_A 124 LERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLST 200 (390)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCSSCCSE
T ss_pred CCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcc---ccccccccceeecccccccc
Confidence 666666665555566666666666666666666566666666666666666666543 13344455555555554432
Q ss_pred CcccccCCccccceeeccCcccccccCccccCCCCCCEEEccCCcccCCCCcCCcCCCCCCeEEccCCcccCCCCccccC
Q 004268 202 PVTKEVGNMKNLDRLHLNGNNLTGSIPSTIGYLNLLDELHLSHNRLDGPIPPTIGNLTNLIALDLSSNQLSGLLPREVGN 281 (764)
Q Consensus 202 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 281 (764)
+ ...++|++|++++|.+..... . ..++|+.|++++|.+++. ..+..
T Consensus 201 ~-----------------------------~~~~~L~~L~l~~n~l~~~~~-~--~~~~L~~L~l~~n~l~~~--~~l~~ 246 (390)
T 3o6n_A 201 L-----------------------------AIPIAVEELDASHNSINVVRG-P--VNVELTILKLQHNNLTDT--AWLLN 246 (390)
T ss_dssp E-----------------------------ECCSSCSEEECCSSCCCEEEC-C--CCSSCCEEECCSSCCCCC--GGGGG
T ss_pred c-----------------------------CCCCcceEEECCCCeeeeccc-c--ccccccEEECCCCCCccc--HHHcC
Confidence 1 222345555555555553321 1 135666666666666643 45666
Q ss_pred CCCCCeEeccCccccCCCCCCCCCCCccceEEccCCcCccCCChhhhcccccceeeccccccccCCchhcccccccceee
Q 004268 282 LKYLASLSLNGNILIGPIPPTIGYLTNLTYLNLGYNRLSSSIPPELMNCSQLLNLVLSHNSLSGSIPSEIGNLIFFRQLD 361 (764)
Q Consensus 282 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ 361 (764)
+++|+.|++++|.+.+..|..+..+++|++|+|++|++++ +|..+..+++|++|+|++|+++ .+|..+..+++|+.|+
T Consensus 247 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~ 324 (390)
T 3o6n_A 247 YPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLY 324 (390)
T ss_dssp CTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEE
T ss_pred CCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEE
Confidence 6677777777777666666666777777777777777763 3445566777777777777777 4566677777888888
Q ss_pred cccccccCCCCCCCCCCCccceecCCCCccccccCC-ccccCccccccCCCCCCC
Q 004268 362 LSRNFINGTIPSQLGKIPNISAVDLSKNNLSGVIPA-SVRRIPKLIVSENNLELE 415 (764)
Q Consensus 362 l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~-~~~~~~~~~~~~n~~~~~ 415 (764)
|++|+++... +..+++|+.|++++|++++.... ++..+++..+..+...|.
T Consensus 325 L~~N~i~~~~---~~~~~~L~~L~l~~N~~~~~~~~~~~~~~~~~~~~~~~~~c~ 376 (390)
T 3o6n_A 325 LDHNSIVTLK---LSTHHTLKNLTLSHNDWDCNSLRALFRNVARPAVDDADQHCK 376 (390)
T ss_dssp CCSSCCCCCC---CCTTCCCSEEECCSSCEEHHHHHHHTTTCCTTTBCCCCSCCC
T ss_pred CCCCccceeC---chhhccCCEEEcCCCCccchhHHHHHHHHHhhcccccCceec
Confidence 8888877442 66778888899999998875443 455666666555554443
No 69
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=8.9e-40 Score=351.32 Aligned_cols=239 Identities=23% Similarity=0.356 Sum_probs=196.8
Q ss_pred HHHHhhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCE
Q 004268 503 MIEATEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKC 581 (764)
Q Consensus 503 ~~~~~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~ 581 (764)
.....++|++.+.||+|+||+||+|+.+ +|+.||+|++.+.........+.+.+|..++..++||||+++++++.+.+.
T Consensus 56 ~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~ 135 (412)
T 2vd5_A 56 VRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENY 135 (412)
T ss_dssp HSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSE
T ss_pred ccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCE
Confidence 3334688999999999999999999875 799999999865332222223457889999999999999999999999999
Q ss_pred EEEEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeecccc
Q 004268 582 MFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLAR 661 (764)
Q Consensus 582 ~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~ 661 (764)
.|+||||+++|+|.+++.+. ...+++..++.++.||+.||+||| ++||+||||||+||+++.++++||+|||+++
T Consensus 136 ~~lVmE~~~gg~L~~~l~~~--~~~l~~~~~~~~~~qi~~aL~~LH---~~giiHrDLKp~NILld~~g~vkL~DFGla~ 210 (412)
T 2vd5_A 136 LYLVMEYYVGGDLLTLLSKF--GERIPAEMARFYLAEIVMAIDSVH---RLGYVHRDIKPDNILLDRCGHIRLADFGSCL 210 (412)
T ss_dssp EEEEECCCCSCBHHHHHHHH--SSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred EEEEEcCCCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecccCHHHeeecCCCCEEEeechhhe
Confidence 99999999999999999742 236899999999999999999999 8999999999999999999999999999998
Q ss_pred ccCCCCCC-ceecccccccccccccc-------cCCCCccchHHHHHHHHHHHHhCCCCCCcccccccccC-------Cc
Q 004268 662 LLHPDSSN-RTLVVGTYGYIAPELAY-------TMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSSSSG-------RK 726 (764)
Q Consensus 662 ~~~~~~~~-~~~~~g~~~y~aPE~~~-------~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~~~~-------~~ 726 (764)
........ ....+||+.|+|||++. +..++.++||||+||++|||++|+.||.+.+..+.... ..
T Consensus 211 ~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~ 290 (412)
T 2vd5_A 211 KLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLS 290 (412)
T ss_dssp ECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCC
T ss_pred eccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCcC
Confidence 76544332 23458999999999987 35689999999999999999999999987654322111 01
Q ss_pred CC-CCCCCcHHHHHHHhhhhc
Q 004268 727 IS-QNPRLDLQCNAYLKNFSQ 746 (764)
Q Consensus 727 ~~-~~~~~~~~~~~~~~~~l~ 746 (764)
.. ....++..+.+++++|+.
T Consensus 291 ~p~~~~~~s~~~~dli~~lL~ 311 (412)
T 2vd5_A 291 LPLVDEGVPEEARDFIQRLLC 311 (412)
T ss_dssp CC----CCCHHHHHHHHTTSS
T ss_pred CCccccCCCHHHHHHHHHHcC
Confidence 11 124689999999999997
No 70
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=1.5e-38 Score=345.52 Aligned_cols=237 Identities=20% Similarity=0.281 Sum_probs=201.2
Q ss_pred HHhhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEEE
Q 004268 505 EATEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCMF 583 (764)
Q Consensus 505 ~~~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 583 (764)
...++|++.+.||+|+||+||+|... +|+.||+|++...... ....+.+.+|++++++++||||+++++++.+.+..|
T Consensus 8 ~~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~-~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 86 (444)
T 3soa_A 8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLS-ARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHY 86 (444)
T ss_dssp HHHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCH-HHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEE
T ss_pred cccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCC-HHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEE
Confidence 45788999999999999999999764 7899999999776543 333567899999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeec---CCCCEEEeeeccc
Q 004268 584 LIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLN---SNLEAFVADFGLA 660 (764)
Q Consensus 584 lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~---~~~~~kl~Dfg~~ 660 (764)
+||||+++|+|.+.+.. ...+++..+..++.||+.||+||| ++||+||||||+||+++ .++.+||+|||++
T Consensus 87 lv~E~~~gg~L~~~i~~---~~~~~e~~~~~i~~qil~aL~~lH---~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a 160 (444)
T 3soa_A 87 LIFDLVTGGELFEDIVA---REYYSEADASHCIQQILEAVLHCH---QMGVVHRNLKPENLLLASKLKGAAVKLADFGLA 160 (444)
T ss_dssp EEECCCBCCBHHHHHHH---CSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSSTTEEESBSSTTCCEEECCCSSC
T ss_pred EEEEeCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEeccCCCCcEEEccCcee
Confidence 99999999999999874 346899999999999999999999 89999999999999998 4688999999999
Q ss_pred cccCCCCCCceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCccccccccc-------CCcCCCCCCC
Q 004268 661 RLLHPDSSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSSSS-------GRKISQNPRL 733 (764)
Q Consensus 661 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~~~-------~~~~~~~~~~ 733 (764)
..............||+.|+|||++.+..++.++||||+||++|+|++|.+||.+.+...... .......+.+
T Consensus 161 ~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 240 (444)
T 3soa_A 161 IEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTV 240 (444)
T ss_dssp BCCCTTCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCTTTTTTS
T ss_pred EEecCCCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhCCCCCCccccccC
Confidence 877655544455789999999999999999999999999999999999999997665422111 1112223467
Q ss_pred cHHHHHHHhhhhccc
Q 004268 734 DLQCNAYLKNFSQGN 748 (764)
Q Consensus 734 ~~~~~~~~~~~l~~~ 748 (764)
+..+.+++++|++.+
T Consensus 241 s~~~~~li~~~L~~d 255 (444)
T 3soa_A 241 TPEAKDLINKMLTIN 255 (444)
T ss_dssp CHHHHHHHHHHSCSS
T ss_pred CHHHHHHHHHHcCCC
Confidence 899999999999987
No 71
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=8.4e-39 Score=338.71 Aligned_cols=236 Identities=21% Similarity=0.326 Sum_probs=199.4
Q ss_pred HhhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcH---HHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCE
Q 004268 506 ATEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEP---AFLESFQTEARLLSQIRHRNIVKLYGFCLHNKC 581 (764)
Q Consensus 506 ~~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~---~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~ 581 (764)
..++|++.+.||+|+||+||+|..+ +|+.||+|++........ ...+.+.+|+.++++++||||+++++++.+...
T Consensus 10 ~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 89 (361)
T 2yab_A 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTD 89 (361)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred hhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCE
Confidence 3578999999999999999999865 799999999976543221 123678899999999999999999999999999
Q ss_pred EEEEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCC----CEEEeee
Q 004268 582 MFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNL----EAFVADF 657 (764)
Q Consensus 582 ~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~----~~kl~Df 657 (764)
.++||||+++|+|.+++.. ...+++..+..++.||+.||+||| ++||+||||||+||+++.++ .+||+||
T Consensus 90 ~~lv~e~~~gg~L~~~l~~---~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~~~~vkl~DF 163 (361)
T 2yab_A 90 VVLILELVSGGELFDFLAQ---KESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDF 163 (361)
T ss_dssp EEEEEECCCSCBHHHHHTT---CSCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCTTSSSCCEEECCC
T ss_pred EEEEEEcCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEeCCCCCccCEEEEec
Confidence 9999999999999999973 346899999999999999999999 89999999999999998776 7999999
Q ss_pred ccccccCCCCCCceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCccccccccc---CCcC----CCC
Q 004268 658 GLARLLHPDSSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSSSS---GRKI----SQN 730 (764)
Q Consensus 658 g~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~~~---~~~~----~~~ 730 (764)
|++....... .....+||+.|+|||++.+..++.++||||+||++|+|++|..||.+.+..+... .... ...
T Consensus 164 G~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~ 242 (361)
T 2yab_A 164 GLAHEIEDGV-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFF 242 (361)
T ss_dssp SSCEECCTTC-CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHHHH
T ss_pred CCceEcCCCC-ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCchhc
Confidence 9998765432 2344679999999999999999999999999999999999999998765432211 1111 112
Q ss_pred CCCcHHHHHHHhhhhccc
Q 004268 731 PRLDLQCNAYLKNFSQGN 748 (764)
Q Consensus 731 ~~~~~~~~~~~~~~l~~~ 748 (764)
+.++..+.+++++|++.+
T Consensus 243 ~~~s~~~~~li~~~L~~d 260 (361)
T 2yab_A 243 SQTSELAKDFIRKLLVKE 260 (361)
T ss_dssp TTSCHHHHHHHHHHSCSS
T ss_pred cCCCHHHHHHHHHHCCCC
Confidence 457889999999999987
No 72
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=4.2e-39 Score=337.45 Aligned_cols=234 Identities=24% Similarity=0.364 Sum_probs=197.2
Q ss_pred hhcCCcceeeeecCceeEEEEEE-CCCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEEEEE
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQL-SSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFLI 585 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 585 (764)
.++|++.+.||+|+||+||+|.+ .+++.||+|++.............+.+|+++++.++||||+++++++.+.+..++|
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 87 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMV 87 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 57899999999999999999986 57999999998653222111235788999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeeccccccCC
Q 004268 586 YEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLARLLHP 665 (764)
Q Consensus 586 ~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 665 (764)
|||+ +|+|.+++.. ...+++..++.++.|++.||+||| ++||+||||||+||++++++.+||+|||++.....
T Consensus 88 ~E~~-~g~l~~~l~~---~~~l~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~ 160 (336)
T 3h4j_B 88 IEYA-GGELFDYIVE---KKRMTEDEGRRFFQQIICAIEYCH---RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTD 160 (336)
T ss_dssp ECCC-CEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTT
T ss_pred EECC-CCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCchhhEEEcCCCCEEEEEeccceeccC
Confidence 9999 6788888863 346899999999999999999999 88999999999999999999999999999987653
Q ss_pred CCCCceecccccccccccccccCCC-CccchHHHHHHHHHHHHhCCCCCCcccccccccC---CcCCCCCCCcHHHHHHH
Q 004268 666 DSSNRTLVVGTYGYIAPELAYTMAV-TEKCDVYSFGVVALEVLMGSHPTDLLSSLSSSSG---RKISQNPRLDLQCNAYL 741 (764)
Q Consensus 666 ~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~DiwslG~il~~lltg~~Pf~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 741 (764)
.. .....+||+.|+|||++.+..+ ++++||||+||++|+|++|+.||++......... .....+..++..+.+++
T Consensus 161 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li 239 (336)
T 3h4j_B 161 GN-FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVMPDFLSPGAQSLI 239 (336)
T ss_dssp SB-TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBCCCCSSCCCCCTTSCHHHHHHH
T ss_pred Cc-ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHHHHHcCCCCCcccCCHHHHHHH
Confidence 32 2344679999999999998876 7899999999999999999999987654332222 22333555789999999
Q ss_pred hhhhccc
Q 004268 742 KNFSQGN 748 (764)
Q Consensus 742 ~~~l~~~ 748 (764)
++|++.+
T Consensus 240 ~~~L~~d 246 (336)
T 3h4j_B 240 RRMIVAD 246 (336)
T ss_dssp HTTSCSS
T ss_pred HHHcCCC
Confidence 9999987
No 73
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=9.1e-39 Score=335.39 Aligned_cols=240 Identities=25% Similarity=0.384 Sum_probs=192.4
Q ss_pred hhcCCcceeeeecCceeEEEEEE----CCCCEEEEEEccCCCCC-cHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCE
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQL----SSGKLVALKKLHRSETE-EPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKC 581 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~----~~~~~vavK~~~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~ 581 (764)
.++|++.+.||+|+||.||+|+. .+++.||+|++...... .......+.+|++++++++||||+++++++.+.+.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 57899999999999999999986 47899999999765432 12234567899999999999999999999999999
Q ss_pred EEEEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeecccc
Q 004268 582 MFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLAR 661 (764)
Q Consensus 582 ~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~ 661 (764)
.|+||||+++++|.+++.. ...+++..+..++.||+.||+||| ++||+||||||+||+++.++.+||+|||+++
T Consensus 96 ~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~ 169 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLER---EGIFMEDTACFYLAEISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCK 169 (327)
T ss_dssp EEEEEECCTTEEHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCTTTEEECTTSCEEECCCSCC-
T ss_pred EEEEEeCCCCCcHHHHHHh---CCCCCHHHHHHHHHHHHHHHHHHH---hCCEEcccCCHHHeEECCCCcEEEEeCCccc
Confidence 9999999999999999973 345889999999999999999999 8899999999999999999999999999997
Q ss_pred ccCCCCCCceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCccccccc---ccCCcCCCCCCCcHHHH
Q 004268 662 LLHPDSSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSS---SSGRKISQNPRLDLQCN 738 (764)
Q Consensus 662 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~---~~~~~~~~~~~~~~~~~ 738 (764)
.............||+.|+|||++.+..++.++||||+|+++|+|++|+.||.+...... ........++.++..+.
T Consensus 170 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~ 249 (327)
T 3a62_A 170 ESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYLTQEAR 249 (327)
T ss_dssp ---------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCTTSCHHHH
T ss_pred ccccCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCCCCCHHHH
Confidence 654443334456799999999999999999999999999999999999999987654221 12223344567889999
Q ss_pred HHHhhhhccchhhH
Q 004268 739 AYLKNFSQGNHRWE 752 (764)
Q Consensus 739 ~~~~~~l~~~~~~~ 752 (764)
+++++|++.++.-|
T Consensus 250 ~li~~~L~~dp~~R 263 (327)
T 3a62_A 250 DLLKKLLKRNAASR 263 (327)
T ss_dssp HHHHHHSCSCGGGS
T ss_pred HHHHHHHhcCHhhc
Confidence 99999999884433
No 74
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=1.9e-38 Score=330.56 Aligned_cols=206 Identities=28% Similarity=0.437 Sum_probs=177.2
Q ss_pred HhhcCCcceeeeecCceeEEEEEECCCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEEEEE
Q 004268 506 ATEDFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFLI 585 (764)
Q Consensus 506 ~~~~y~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 585 (764)
..++|++.+.||+|+||+||+|++.+|+.||+|++...... ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 19 l~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 97 (311)
T 3niz_A 19 LMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAED-EGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLV 97 (311)
T ss_dssp SSCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC-------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEE
T ss_pred hHhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEeccccc-chhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEE
Confidence 46899999999999999999999888999999999765432 22346788999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeeccccccCC
Q 004268 586 YEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLARLLHP 665 (764)
Q Consensus 586 ~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 665 (764)
|||+++ ++.+++... ...+++..++.++.|++.||+||| ++||+||||||+||+++.++.+||+|||.+.....
T Consensus 98 ~e~~~~-~l~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~ 171 (311)
T 3niz_A 98 FEFMEK-DLKKVLDEN--KTGLQDSQIKIYLYQLLRGVAHCH---QHRILHRDLKPQNLLINSDGALKLADFGLARAFGI 171 (311)
T ss_dssp EECCSE-EHHHHHHTC--TTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEETTS
T ss_pred EcCCCC-CHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCchHhEEECCCCCEEEccCcCceecCC
Confidence 999985 788887643 345899999999999999999999 89999999999999999999999999999988765
Q ss_pred CCCCceeccccccccccccccc-CCCCccchHHHHHHHHHHHHhCCCCCCcccc
Q 004268 666 DSSNRTLVVGTYGYIAPELAYT-MAVTEKCDVYSFGVVALEVLMGSHPTDLLSS 718 (764)
Q Consensus 666 ~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~~lltg~~Pf~~~~~ 718 (764)
.........+|+.|+|||++.+ ..++.++||||+||++|+|++|+.||.+...
T Consensus 172 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~ 225 (311)
T 3niz_A 172 PVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTD 225 (311)
T ss_dssp CCC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSST
T ss_pred CcccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCCh
Confidence 5444555678999999999876 5689999999999999999999999986554
No 75
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=2.5e-38 Score=331.20 Aligned_cols=244 Identities=25% Similarity=0.412 Sum_probs=205.0
Q ss_pred CCccCHHHHHHHhhc----------CCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHh
Q 004268 495 DGRITFEEMIEATED----------FHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQ 563 (764)
Q Consensus 495 ~~~~~~~~~~~~~~~----------y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~ 563 (764)
.+.++++++..+.+. |...+.||+|+||.||+|+.. +|+.||||++....... .+.+.+|+.++++
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~---~~~~~~E~~~l~~ 98 (321)
T 2c30_A 22 SGVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQR---RELLFNEVVIMRD 98 (321)
T ss_dssp ---CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCS---HHHHHHHHHHHTT
T ss_pred CCcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhH---HHHHHHHHHHHHh
Confidence 345677777766653 777889999999999999876 79999999987655433 3678899999999
Q ss_pred cCCCceeeEeeEEeeCCEEEEEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCC
Q 004268 564 IRHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNN 643 (764)
Q Consensus 564 l~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~N 643 (764)
++||||+++++++...+..++||||+++++|.+++.. ..+++..+..++.|++.||+||| ++||+||||||+|
T Consensus 99 l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~----~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~N 171 (321)
T 2c30_A 99 YQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ----VRLNEEQIATVCEAVLQALAYLH---AQGVIHRDIKSDS 171 (321)
T ss_dssp CCCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTT----CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGG
T ss_pred CCCCCcceEEEEEEECCEEEEEEecCCCCCHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHH
Confidence 9999999999999999999999999999999999863 35899999999999999999999 8899999999999
Q ss_pred eeecCCCCEEEeeeccccccCCCCCCceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCccccccccc
Q 004268 644 ILLNSNLEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSSSS 723 (764)
Q Consensus 644 Ill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~~~ 723 (764)
|+++.++.+||+|||++..............||+.|+|||++.+..++.++||||+|+++|+|++|+.||..........
T Consensus 172 Ill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~ 251 (321)
T 2c30_A 172 ILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMK 251 (321)
T ss_dssp EEECTTCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH
T ss_pred EEECCCCcEEEeeeeeeeecccCccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 99999999999999999877654444455689999999999999999999999999999999999999998665422211
Q ss_pred C------CcCCCCCCCcHHHHHHHhhhhccc
Q 004268 724 G------RKISQNPRLDLQCNAYLKNFSQGN 748 (764)
Q Consensus 724 ~------~~~~~~~~~~~~~~~~~~~~l~~~ 748 (764)
. ........++..+.+++++|++.+
T Consensus 252 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~d 282 (321)
T 2c30_A 252 RLRDSPPPKLKNSHKVSPVLRDFLERMLVRD 282 (321)
T ss_dssp HHHHSSCCCCTTGGGSCHHHHHHHHHHSCSS
T ss_pred HHhcCCCCCcCccccCCHHHHHHHHHHccCC
Confidence 1 111223346788999999999887
No 76
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=1.2e-38 Score=351.94 Aligned_cols=242 Identities=21% Similarity=0.315 Sum_probs=204.4
Q ss_pred hhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEEEEE
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFLI 585 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 585 (764)
.++|.+.+.||+|+||.||+|+.+ +|+.||+|++...........+.+.+|++++++++||||+++++++.+....|+|
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 263 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV 263 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence 468999999999999999999875 7999999999654332222246788999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhcCc-cccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeeccccccC
Q 004268 586 YEYMERGSLFCVLRNDV-EAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLARLLH 664 (764)
Q Consensus 586 ~e~~~~~~L~~~l~~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~ 664 (764)
|||++||+|..++.... ....+++..++.++.||+.||+||| ++||+||||||+||+++.+|.+||+|||+++...
T Consensus 264 mE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH---~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~ 340 (543)
T 3c4z_A 264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELK 340 (543)
T ss_dssp ECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHH---HcCCcccCCChHHEEEeCCCCEEEeecceeeecc
Confidence 99999999999987542 2346899999999999999999999 8999999999999999999999999999998876
Q ss_pred CCCCCceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCccccccc-------ccCCcCCCCCCCcHHH
Q 004268 665 PDSSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSS-------SSGRKISQNPRLDLQC 737 (764)
Q Consensus 665 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~-------~~~~~~~~~~~~~~~~ 737 (764)
.........+||+.|+|||++.+..++.++||||+||++|||++|+.||.+...... ........++.++..+
T Consensus 341 ~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~~~~~~p~~~s~~~ 420 (543)
T 3c4z_A 341 AGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPAS 420 (543)
T ss_dssp TTCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHCCCCCCTTSCHHH
T ss_pred CCCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhhcccCCCcccCHHH
Confidence 544444456899999999999999999999999999999999999999986542110 1112233456789999
Q ss_pred HHHHhhhhccchhh
Q 004268 738 NAYLKNFSQGNHRW 751 (764)
Q Consensus 738 ~~~~~~~l~~~~~~ 751 (764)
.+++++|++.++.-
T Consensus 421 ~~li~~lL~~dP~~ 434 (543)
T 3c4z_A 421 KDFCEALLQKDPEK 434 (543)
T ss_dssp HHHHHHHSCSSGGG
T ss_pred HHHHHHhccCCHhH
Confidence 99999999987433
No 77
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=4.1e-38 Score=334.63 Aligned_cols=236 Identities=21% Similarity=0.341 Sum_probs=199.2
Q ss_pred HHhhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEEE
Q 004268 505 EATEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCMF 583 (764)
Q Consensus 505 ~~~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 583 (764)
...++|++.+.||+|+||.||+|.++ +|+.||+|++...... ....+.+.+|++++++++||||+++++++.+.+..|
T Consensus 26 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ 104 (362)
T 2bdw_A 26 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLS-ARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHY 104 (362)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred CcccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCC-HHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEE
Confidence 34678999999999999999999865 7899999999766543 334577899999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCC---CCEEEeeeccc
Q 004268 584 LIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSN---LEAFVADFGLA 660 (764)
Q Consensus 584 lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~---~~~kl~Dfg~~ 660 (764)
+||||+++++|.+++.. ...+++..+..++.||+.||+||| ++||+||||||+||+++.+ +.+||+|||++
T Consensus 105 lv~e~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a 178 (362)
T 2bdw_A 105 LVFDLVTGGELFEDIVA---REFYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLA 178 (362)
T ss_dssp EEECCCCSCBHHHHHTT---CSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred EEEecCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCchHHEEEecCCCCCCEEEeecCcc
Confidence 99999999999999873 346899999999999999999999 8999999999999999864 45999999999
Q ss_pred cccCCCCCCceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCccccccccc---CC----cCCCCCCC
Q 004268 661 RLLHPDSSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSSSS---GR----KISQNPRL 733 (764)
Q Consensus 661 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~~~---~~----~~~~~~~~ 733 (764)
...... .......||+.|+|||++.+..++.++||||+||++|+|++|+.||.+.+...... .. .....+.+
T Consensus 179 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 257 (362)
T 2bdw_A 179 IEVNDS-EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTV 257 (362)
T ss_dssp BCCTTC-CSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTGGGGS
T ss_pred eEecCC-cccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCcccccCC
Confidence 876533 22344679999999999999999999999999999999999999998665422111 11 11112346
Q ss_pred cHHHHHHHhhhhccc
Q 004268 734 DLQCNAYLKNFSQGN 748 (764)
Q Consensus 734 ~~~~~~~~~~~l~~~ 748 (764)
+..+.+++++|++.+
T Consensus 258 ~~~~~~li~~~L~~d 272 (362)
T 2bdw_A 258 TPEAKSLIDSMLTVN 272 (362)
T ss_dssp CHHHHHHHHHHSCSS
T ss_pred CHHHHHHHHHHcCCC
Confidence 889999999999987
No 78
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.8e-38 Score=330.40 Aligned_cols=232 Identities=24% Similarity=0.328 Sum_probs=197.8
Q ss_pred hhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEEEEE
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFLI 585 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 585 (764)
.++|++.+.||+|+||+||+|.+. +++.||+|.+.... .....+.+|+++++.++||||+++++++.+.+..++|
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~----~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv 79 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG----TDQVLVKKEISILNIARHRNILHLHESFESMEELVMI 79 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT----HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEE
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc----ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEE
Confidence 578999999999999999999865 68899999987543 2236788999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecC--CCCEEEeeecccccc
Q 004268 586 YEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNS--NLEAFVADFGLARLL 663 (764)
Q Consensus 586 ~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~--~~~~kl~Dfg~~~~~ 663 (764)
|||+++++|.+++... ...+++..+..++.|++.||+||| ++||+||||||+||+++. ++.+||+|||.+...
T Consensus 80 ~e~~~g~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH---~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~ 154 (321)
T 1tki_A 80 FEFISGLDIFERINTS--AFELNEREIVSYVHQVCEALQFLH---SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQL 154 (321)
T ss_dssp ECCCCCCBHHHHHTSS--SCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCTTCEEC
T ss_pred EEeCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHH---HCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeEC
Confidence 9999999999999642 346899999999999999999999 899999999999999987 789999999999877
Q ss_pred CCCCCCceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccccccccC---C----cCCCCCCCcHH
Q 004268 664 HPDSSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSSSSG---R----KISQNPRLDLQ 736 (764)
Q Consensus 664 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~~~~---~----~~~~~~~~~~~ 736 (764)
... .......|++.|+|||++.+..++.++||||+|+++|+|++|..||.+......... . .....+.++..
T Consensus 155 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~ 233 (321)
T 1tki_A 155 KPG-DNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIE 233 (321)
T ss_dssp CTT-CEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCHHHHTTSCHH
T ss_pred CCC-CccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHcCCCCCChhhhccCCHH
Confidence 543 334456799999999999998899999999999999999999999987654321111 1 11112467889
Q ss_pred HHHHHhhhhccc
Q 004268 737 CNAYLKNFSQGN 748 (764)
Q Consensus 737 ~~~~~~~~l~~~ 748 (764)
+.+++++|++.+
T Consensus 234 ~~~li~~~L~~d 245 (321)
T 1tki_A 234 AMDFVDRLLVKE 245 (321)
T ss_dssp HHHHHHTTSCSS
T ss_pred HHHHHHHHcCCC
Confidence 999999999987
No 79
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=2.9e-37 Score=337.75 Aligned_cols=348 Identities=22% Similarity=0.218 Sum_probs=287.9
Q ss_pred CCCccccCCccccCCCCCcEEEcCCCcCcccCCccccCCCCCCEEEccCCcCcccCCcccCCCCCCCEEecCCCcccccC
Q 004268 28 GTLLSGRMPSEIGALSKLEKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLDLNLSNNILNGSI 107 (764)
Q Consensus 28 ~~~~~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 107 (764)
.+...+..+..++.+++|++|++++|.+++. | .+..+++|++|+|++|++++. + ++.+++|++|+|++|.++++
T Consensus 27 ~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~- 100 (457)
T 3bz5_A 27 AFEMQATDTISEEQLATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL- 100 (457)
T ss_dssp HTTCCTTSEEEHHHHTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-
T ss_pred hcCcCcccccChhHcCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-
Confidence 3444556667889999999999999999975 5 699999999999999999964 3 89999999999999999975
Q ss_pred CccCcCCCCCCEEEccCCcCcccCCccccCCCCcCEEecccCcccccCCccccCCCCCCeeecccCCCCCCCCCccccCC
Q 004268 108 PLEFGNLKDLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNLKSLFLDNNHLSGPIPSTLYHLN 187 (764)
Q Consensus 108 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~ 187 (764)
+ |+++++|++|++++|+++++ + +..+++|++|++++|+++++ .+.++++|++|++++|...+.. .+..++
T Consensus 101 ~--~~~l~~L~~L~L~~N~l~~l-~--~~~l~~L~~L~l~~N~l~~l---~l~~l~~L~~L~l~~n~~~~~~--~~~~l~ 170 (457)
T 3bz5_A 101 D--VTPLTKLTYLNCDTNKLTKL-D--VSQNPLLTYLNCARNTLTEI---DVSHNTQLTELDCHLNKKITKL--DVTPQT 170 (457)
T ss_dssp C--CTTCTTCCEEECCSSCCSCC-C--CTTCTTCCEEECTTSCCSCC---CCTTCTTCCEEECTTCSCCCCC--CCTTCT
T ss_pred e--cCCCCcCCEEECCCCcCCee-c--CCCCCcCCEEECCCCcccee---ccccCCcCCEEECCCCCccccc--ccccCC
Confidence 2 88999999999999999986 2 89999999999999999975 3889999999999999543333 478899
Q ss_pred CccEEEecCccCcCCcccccCCccccceeeccCcccccccCccccCCCCCCEEEccCCcccCCCCcCCcCCCCCCeEEcc
Q 004268 188 QLATLCLGYNKLVGPVTKEVGNMKNLDRLHLNGNNLTGSIPSTIGYLNLLDELHLSHNRLDGPIPPTIGNLTNLIALDLS 267 (764)
Q Consensus 188 ~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 267 (764)
+|+.|++++|+++.++ +..+++|+.|++++|.+++. .+..+++|+.|++++|+++++ | +..+++|+.|+++
T Consensus 171 ~L~~L~ls~n~l~~l~---l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~i-p--~~~l~~L~~L~l~ 241 (457)
T 3bz5_A 171 QLTTLDCSFNKITELD---VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTEI-D--VTPLTQLTYFDCS 241 (457)
T ss_dssp TCCEEECCSSCCCCCC---CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECC
T ss_pred cCCEEECCCCccceec---cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCccccc-C--ccccCCCCEEEee
Confidence 9999999999999864 78899999999999999975 388899999999999999974 4 8899999999999
Q ss_pred CCcccCCCCccccCCC-------CCCeEeccCccccCCCCCCCCCCCccceEEccCCcCccCCCh--------hhhcccc
Q 004268 268 SNQLSGLLPREVGNLK-------YLASLSLNGNILIGPIPPTIGYLTNLTYLNLGYNRLSSSIPP--------ELMNCSQ 332 (764)
Q Consensus 268 ~n~l~~~~~~~~~~l~-------~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~--------~~~~l~~ 332 (764)
+|++++..+..+..+. +|+.|++++|.+.+..| ++.+++|+.|++++|...+.+|. .+.++++
T Consensus 242 ~N~l~~~~~~~l~~L~~L~l~~n~L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~~~~~L~~L~l~~~~~ 319 (457)
T 3bz5_A 242 VNPLTELDVSTLSKLTTLHCIQTDLLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDCQAAGITELDLSQNPK 319 (457)
T ss_dssp SSCCSCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEECTTCCCSCCCCTTCTT
T ss_pred CCcCCCcCHHHCCCCCEEeccCCCCCEEECCCCccCCccc--ccccccCCEEECCCCcccceeccCCCcceEechhhccc
Confidence 9999987655554444 45566666665544444 45678999999999986544332 2566788
Q ss_pred cceeeccccccccCCchhcccccccceeecccccccCCCCCCCCCCCccceecCCCCccccccCCccccCccccccCCCC
Q 004268 333 LLNLVLSHNSLSGSIPSEIGNLIFFRQLDLSRNFINGTIPSQLGKIPNISAVDLSKNNLSGVIPASVRRIPKLIVSENNL 412 (764)
Q Consensus 333 L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~n~~ 412 (764)
|++|++++|++++. + +..+++|+.|++++|++++ ++.|..|++++|.++|. ..+..++.++++.|.+
T Consensus 320 L~~L~L~~N~l~~l-~--l~~l~~L~~L~l~~N~l~~--------l~~L~~L~l~~n~l~g~--~~~~~l~~l~l~~N~l 386 (457)
T 3bz5_A 320 LVYLYLNNTELTEL-D--VSHNTKLKSLSCVNAHIQD--------FSSVGKIPALNNNFEAE--GQTITMPKETLTNNSL 386 (457)
T ss_dssp CCEEECTTCCCSCC-C--CTTCTTCSEEECCSSCCCB--------CTTGGGSSGGGTSEEEE--EEEEECCCBCCBTTBE
T ss_pred CCEEECCCCccccc-c--cccCCcCcEEECCCCCCCC--------ccccccccccCCcEEec--ceeeecCccccccCcE
Confidence 89999999999864 3 8888899999999999885 35677788899999876 3566788899999988
Q ss_pred CCC
Q 004268 413 ELE 415 (764)
Q Consensus 413 ~~~ 415 (764)
.+.
T Consensus 387 ~g~ 389 (457)
T 3bz5_A 387 TIA 389 (457)
T ss_dssp EEE
T ss_pred EEE
Confidence 643
No 80
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=2.3e-38 Score=350.23 Aligned_cols=241 Identities=22% Similarity=0.290 Sum_probs=201.9
Q ss_pred hhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEEEEE
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFLI 585 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 585 (764)
.++|++.+.||+|+||.||+|+.. +|+.||+|++.............+.+|+++++.++||||+++++++.+.+..|+|
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 262 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV 262 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence 467999999999999999999865 7999999998654322222236678999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeeccccccCC
Q 004268 586 YEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLARLLHP 665 (764)
Q Consensus 586 ~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 665 (764)
|||++||+|.+++... ....+++..++.++.||+.||+||| ++||+||||||+||+++.++.+||+|||++.....
T Consensus 263 mEy~~gg~L~~~l~~~-~~~~l~e~~~~~i~~qIl~aL~yLH---~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~ 338 (576)
T 2acx_A 263 LTLMNGGDLKFHIYHM-GQAGFPEARAVFYAAEICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPE 338 (576)
T ss_dssp ECCCCSCBHHHHHHSS-SSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EEcCCCCcHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeccCCchheEEEeCCCCeEEEecccceeccc
Confidence 9999999999999754 2334899999999999999999999 88999999999999999999999999999987653
Q ss_pred CCCCceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCccccccc-------ccCCcCCCCCCCcHHHH
Q 004268 666 DSSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSS-------SSGRKISQNPRLDLQCN 738 (764)
Q Consensus 666 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~-------~~~~~~~~~~~~~~~~~ 738 (764)
.. .....+||+.|+|||++.+..++.++||||+||++|+|++|+.||........ ........+..++..+.
T Consensus 339 ~~-~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~~~~~~p~~~s~~~~ 417 (576)
T 2acx_A 339 GQ-TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQAR 417 (576)
T ss_dssp TC-CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHHCCCCCCTTSCHHHH
T ss_pred Cc-cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhcccccCCccCCHHHH
Confidence 32 33446899999999999999999999999999999999999999987543111 11122233456889999
Q ss_pred HHHhhhhccchhhH
Q 004268 739 AYLKNFSQGNHRWE 752 (764)
Q Consensus 739 ~~~~~~l~~~~~~~ 752 (764)
+++++|++.++.-|
T Consensus 418 dLI~~lL~~dP~~R 431 (576)
T 2acx_A 418 SLCSQLLCKDPAER 431 (576)
T ss_dssp HHHHHHTCSSGGGS
T ss_pred HHHHHhccCCHHHc
Confidence 99999999874333
No 81
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.4e-37 Score=324.49 Aligned_cols=237 Identities=26% Similarity=0.436 Sum_probs=199.1
Q ss_pred hhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEEEEE
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFLI 585 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 585 (764)
.++|++.+.||+|+||+||+|.+. +++.||+|++... .....+.+.+|++++++++||||+++++++.+++..++|
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~---~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 85 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRF---DEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFI 85 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCC---CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccC---CHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEE
Confidence 478999999999999999999865 7899999988543 334457899999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeeccccccCC
Q 004268 586 YEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLARLLHP 665 (764)
Q Consensus 586 ~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 665 (764)
|||+++++|.+++... ...+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||.+.....
T Consensus 86 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 160 (310)
T 3s95_A 86 TEYIKGGTLRGIIKSM--DSQYPWSQRVSFAKDIASGMAYLH---SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVD 160 (310)
T ss_dssp EECCTTCBHHHHHHHC--CTTSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEECTTSCEEECCCTTCEECC-
T ss_pred EEecCCCcHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCcCeEEECCCCCEEEeecccceeccc
Confidence 9999999999999752 346899999999999999999999 89999999999999999999999999999987643
Q ss_pred CCCCc--------------eecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccccccccCC------
Q 004268 666 DSSNR--------------TLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSSSSGR------ 725 (764)
Q Consensus 666 ~~~~~--------------~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~~~~~------ 725 (764)
..... ....||+.|+|||++.+..++.++||||+|+++|+|++|..||............
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~ 240 (310)
T 3s95_A 161 EKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFL 240 (310)
T ss_dssp -------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHH
T ss_pred ccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhccc
Confidence 32211 1457899999999999999999999999999999999999999865443222211
Q ss_pred cCCCCCCCcHHHHHHHhhhhccchhh
Q 004268 726 KISQNPRLDLQCNAYLKNFSQGNHRW 751 (764)
Q Consensus 726 ~~~~~~~~~~~~~~~~~~~l~~~~~~ 751 (764)
....++..+..+.+++++|++.++.-
T Consensus 241 ~~~~~~~~~~~l~~li~~~l~~dP~~ 266 (310)
T 3s95_A 241 DRYCPPNCPPSFFPITVRCCDLDPEK 266 (310)
T ss_dssp HHTCCTTCCTTHHHHHHHHTCSSGGG
T ss_pred cccCCCCCCHHHHHHHHHHccCChhh
Confidence 11225667888999999999987433
No 82
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=2.6e-37 Score=333.42 Aligned_cols=311 Identities=21% Similarity=0.188 Sum_probs=243.8
Q ss_pred cCCCeeEEEeCCCCccccCCccccCCCCCcEEEcCCCcCcccCCccccCCCCCCEEEccCCcCcccCCcccCCCCCCCEE
Q 004268 17 CFPNLVTFRIWGTLLSGRMPSEIGALSKLEKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLDL 96 (764)
Q Consensus 17 ~~~~l~~L~l~~~~~~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L 96 (764)
.+++++.|++.+|.++...+..+..+++|++|+|++|.++++.+..|..+++|++|+|++|.+++..+..|+.+++|++|
T Consensus 43 ~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 122 (390)
T 3o6n_A 43 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 122 (390)
T ss_dssp GGCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred ccCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEE
Confidence 45899999999999987766678999999999999999998888899999999999999999998888899999999999
Q ss_pred ecCCCcccccCCccCcCCCCCCEEEccCCcCcccCCccccCCCCcCEEecccCcccccCCccccCCCCCCeeecccCCCC
Q 004268 97 NLSNNILNGSIPLEFGNLKDLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNLKSLFLDNNHLS 176 (764)
Q Consensus 97 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~ 176 (764)
+|++|.++.+.+..|.++++|++|++++|.+..+.+..|.++++|++|++++|+++.+ .+..+++|+.|++++|.++
T Consensus 123 ~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~l~ 199 (390)
T 3o6n_A 123 VLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLS 199 (390)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCSSCCS
T ss_pred ECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcc---ccccccccceeeccccccc
Confidence 9999999988777889999999999999999999999999999999999999999866 3667899999999999887
Q ss_pred CCCCCccccCCCccEEEecCccCcCCcccccCCccccceeeccCcccccccCccccCCCCCCEEEccCCcccCCCCcCCc
Q 004268 177 GPIPSTLYHLNQLATLCLGYNKLVGPVTKEVGNMKNLDRLHLNGNNLTGSIPSTIGYLNLLDELHLSHNRLDGPIPPTIG 256 (764)
Q Consensus 177 ~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 256 (764)
. +...++|+.|++++|.+..+... ..++ |+.|++++|.+++. ..+.
T Consensus 200 ~-----~~~~~~L~~L~l~~n~l~~~~~~---~~~~------------------------L~~L~l~~n~l~~~--~~l~ 245 (390)
T 3o6n_A 200 T-----LAIPIAVEELDASHNSINVVRGP---VNVE------------------------LTILKLQHNNLTDT--AWLL 245 (390)
T ss_dssp E-----EECCSSCSEEECCSSCCCEEECC---CCSS------------------------CCEEECCSSCCCCC--GGGG
T ss_pred c-----cCCCCcceEEECCCCeeeecccc---cccc------------------------ccEEECCCCCCccc--HHHc
Confidence 4 34456777888887777644221 1234 45555555555432 3455
Q ss_pred CCCCCCeEEccCCcccCCCCccccCCCCCCeEeccCccccCCCCCCCCCCCccceEEccCCcCccCCChhhhccccccee
Q 004268 257 NLTNLIALDLSSNQLSGLLPREVGNLKYLASLSLNGNILIGPIPPTIGYLTNLTYLNLGYNRLSSSIPPELMNCSQLLNL 336 (764)
Q Consensus 257 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L 336 (764)
.+++|+.|+|++|.+.+..+..|..+++|+.|++++|++.+ .+..+..+++|++|+|++|+++ .+|..+..+++|++|
T Consensus 246 ~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L 323 (390)
T 3o6n_A 246 NYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENL 323 (390)
T ss_dssp GCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEE
T ss_pred CCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEE
Confidence 55666666666666665556666666666666666666654 3344556777777777777777 456667777788888
Q ss_pred eccccccccCCchhcccccccceeecccccccC
Q 004268 337 VLSHNSLSGSIPSEIGNLIFFRQLDLSRNFING 369 (764)
Q Consensus 337 ~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 369 (764)
+|++|++++. + +..+++|+.|++++|++.+
T Consensus 324 ~L~~N~i~~~-~--~~~~~~L~~L~l~~N~~~~ 353 (390)
T 3o6n_A 324 YLDHNSIVTL-K--LSTHHTLKNLTLSHNDWDC 353 (390)
T ss_dssp ECCSSCCCCC-C--CCTTCCCSEEECCSSCEEH
T ss_pred ECCCCcccee-C--chhhccCCEEEcCCCCccc
Confidence 8888887744 2 5667778888888888764
No 83
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=7.8e-39 Score=350.93 Aligned_cols=237 Identities=22% Similarity=0.300 Sum_probs=191.9
Q ss_pred hhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEEEEE
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFLI 585 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 585 (764)
.++|++.+.||+|+||.||+|... +|+.||+|++.............+.+|+++++.++||||+++++++.+.+..++|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 478999999999999999999864 7999999998754333333346778899999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCC-CCcEEcCCCCCCeeecCCCCEEEeeeccccccC
Q 004268 586 YEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCK-PSIVHRDISSNNILLNSNLEAFVADFGLARLLH 664 (764)
Q Consensus 586 ~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~-~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~ 664 (764)
|||+++++|..++.. ...+++..+..++.||+.||+||| + +||+||||||+||+++.++.+||+|||+++...
T Consensus 227 ~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH---~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 300 (446)
T 4ejn_A 227 MEYANGGELFFHLSR---ERVFSEDRARFYGAEIVSALDYLH---SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGI 300 (446)
T ss_dssp ECCCSSCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTC
T ss_pred EeeCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHh---hcCCEEECCCCHHHEEECCCCCEEEccCCCceecc
Confidence 999999999999873 346899999999999999999999 7 899999999999999999999999999998655
Q ss_pred CCCCCceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCccccccc---ccCCcCCCCCCCcHHHHHHH
Q 004268 665 PDSSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSS---SSGRKISQNPRLDLQCNAYL 741 (764)
Q Consensus 665 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 741 (764)
.........+||+.|+|||++.+..++.++||||+||++|+|++|+.||.+...... ........+..++..+.+++
T Consensus 301 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li 380 (446)
T 4ejn_A 301 KDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAKSLL 380 (446)
T ss_dssp C-----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHH
T ss_pred CCCcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHHhCCCCCCccCCHHHHHHH
Confidence 444445567899999999999999999999999999999999999999986654221 12223334556889999999
Q ss_pred hhhhccch
Q 004268 742 KNFSQGNH 749 (764)
Q Consensus 742 ~~~l~~~~ 749 (764)
++|++.++
T Consensus 381 ~~~L~~dP 388 (446)
T 4ejn_A 381 SGLLKKDP 388 (446)
T ss_dssp HHHTCSST
T ss_pred HHHcccCH
Confidence 99999873
No 84
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=1.5e-38 Score=337.18 Aligned_cols=240 Identities=20% Similarity=0.284 Sum_probs=196.9
Q ss_pred HhhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCC--cHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEE
Q 004268 506 ATEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETE--EPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCM 582 (764)
Q Consensus 506 ~~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 582 (764)
..++|++.+.||+|+||+||+|.+. +++.||+|++...... .....+.+.+|+++++.++||||+++++++.+.+..
T Consensus 22 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~ 101 (351)
T 3c0i_A 22 FEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGML 101 (351)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEE
T ss_pred cccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 3578999999999999999999865 7999999998542210 001136788999999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHHhcCc-cccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCC---EEEeeec
Q 004268 583 FLIYEYMERGSLFCVLRNDV-EAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLE---AFVADFG 658 (764)
Q Consensus 583 ~lv~e~~~~~~L~~~l~~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~---~kl~Dfg 658 (764)
|+||||+++++|.+++.... ....+++..+..++.||+.||+||| ++||+||||||+||+++.++. +||+|||
T Consensus 102 ~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg 178 (351)
T 3c0i_A 102 YMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH---DNNIIHRDVKPHCVLLASKENSAPVKLGGFG 178 (351)
T ss_dssp EEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECSSSTTCCEEECCCT
T ss_pred EEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCChHHeEEecCCCCCcEEEecCc
Confidence 99999999999988876432 2335899999999999999999999 899999999999999986554 9999999
Q ss_pred cccccCCCCCCceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCccccccc--ccCCcCC----CCCC
Q 004268 659 LARLLHPDSSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSS--SSGRKIS----QNPR 732 (764)
Q Consensus 659 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~--~~~~~~~----~~~~ 732 (764)
++..............||+.|+|||++.+..++.++||||+||++|+|++|+.||.+...... ....... ..+.
T Consensus 179 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~i~~~~~~~~~~~~~~ 258 (351)
T 3c0i_A 179 VAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNPRQWSH 258 (351)
T ss_dssp TCEECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHHHHHHHHHHTCCCCCHHHHTT
T ss_pred ceeEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHHHHHHHHHcCCCCCCcccccc
Confidence 998876544444556899999999999999999999999999999999999999986543110 0111111 1245
Q ss_pred CcHHHHHHHhhhhccc
Q 004268 733 LDLQCNAYLKNFSQGN 748 (764)
Q Consensus 733 ~~~~~~~~~~~~l~~~ 748 (764)
++..+.+++++|++.+
T Consensus 259 ~s~~~~~li~~~L~~d 274 (351)
T 3c0i_A 259 ISESAKDLVRRMLMLD 274 (351)
T ss_dssp SCHHHHHHHHHHTCSS
T ss_pred CCHHHHHHHHHHCCCC
Confidence 7889999999999977
No 85
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=2.9e-38 Score=330.83 Aligned_cols=235 Identities=27% Similarity=0.401 Sum_probs=194.9
Q ss_pred HhhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEEEE
Q 004268 506 ATEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFL 584 (764)
Q Consensus 506 ~~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 584 (764)
..++|++.+.||+|+||+||+|.+. +++.||+|++....... ..+.+.+|+.+++.++||||+++++++.+++..|+
T Consensus 5 ~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l 82 (323)
T 3tki_A 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD--CPENIKKEICINKMLNHENVVKFYGHRREGNIQYL 82 (323)
T ss_dssp TTTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC---------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred HhhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccc--hHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEE
Confidence 3578999999999999999999865 89999999986554332 23678899999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeeccccccC
Q 004268 585 IYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLARLLH 664 (764)
Q Consensus 585 v~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~ 664 (764)
||||+++++|.+++.. ...+++..++.++.||+.||+||| ++||+||||||+||+++.++.+||+|||.+....
T Consensus 83 v~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 156 (323)
T 3tki_A 83 FLEYCSGGELFDRIEP---DIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFR 156 (323)
T ss_dssp EEECCTTEEGGGGSBT---TTBCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECE
T ss_pred EEEcCCCCcHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHH---HCCccccccchHHEEEeCCCCEEEEEeeccceec
Confidence 9999999999999863 345899999999999999999999 8999999999999999999999999999998653
Q ss_pred CCC--CCceecccccccccccccccCCC-CccchHHHHHHHHHHHHhCCCCCCcccccccc------cCCcCCCCCCCcH
Q 004268 665 PDS--SNRTLVVGTYGYIAPELAYTMAV-TEKCDVYSFGVVALEVLMGSHPTDLLSSLSSS------SGRKISQNPRLDL 735 (764)
Q Consensus 665 ~~~--~~~~~~~g~~~y~aPE~~~~~~~-~~~~DiwslG~il~~lltg~~Pf~~~~~~~~~------~~~~~~~~~~~~~ 735 (764)
... .......||+.|+|||++.+..+ +.++||||+||++|+|++|+.||......... ..........++.
T Consensus 157 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (323)
T 3tki_A 157 YNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDS 236 (323)
T ss_dssp ETTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCTTSTTGGGSCH
T ss_pred cCCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcccccCCccccCCH
Confidence 222 22234678999999999988776 77899999999999999999999866543211 1112222345788
Q ss_pred HHHHHHhhhhccc
Q 004268 736 QCNAYLKNFSQGN 748 (764)
Q Consensus 736 ~~~~~~~~~l~~~ 748 (764)
.+.+++++|++.+
T Consensus 237 ~~~~li~~~L~~d 249 (323)
T 3tki_A 237 APLALLHKILVEN 249 (323)
T ss_dssp HHHHHHHHHSCSS
T ss_pred HHHHHHHHHccCC
Confidence 9999999999987
No 86
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=6.2e-38 Score=328.93 Aligned_cols=238 Identities=21% Similarity=0.321 Sum_probs=199.1
Q ss_pred HhhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcH---HHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCE
Q 004268 506 ATEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEP---AFLESFQTEARLLSQIRHRNIVKLYGFCLHNKC 581 (764)
Q Consensus 506 ~~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~---~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~ 581 (764)
..++|++.+.||+|+||.||+|... +|+.||+|++........ ...+.+.+|+.++++++||||+++++++.+...
T Consensus 9 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 88 (326)
T 2y0a_A 9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTD 88 (326)
T ss_dssp HHHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred cccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCE
Confidence 3577999999999999999999865 789999999876543211 123678899999999999999999999999999
Q ss_pred EEEEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCC----CEEEeee
Q 004268 582 MFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNL----EAFVADF 657 (764)
Q Consensus 582 ~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~----~~kl~Df 657 (764)
.++||||+++++|.+++.. ...+++..+..++.||+.||+||| ++||+||||||+||+++.++ .+||+||
T Consensus 89 ~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Df 162 (326)
T 2y0a_A 89 VILILELVAGGELFDFLAE---KESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDF 162 (326)
T ss_dssp EEEEEECCCSCBHHHHHTT---SSCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCSSSSSCCEEECCC
T ss_pred EEEEEEcCCCCCHHHHHHh---cCCcCHHHHHHHHHHHHHHHHHHH---HCCeEcCCCCHHHEEEecCCCCCCCEEEEEC
Confidence 9999999999999999973 346899999999999999999999 89999999999999999877 8999999
Q ss_pred ccccccCCCCCCceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccccccccC---C----cCCCC
Q 004268 658 GLARLLHPDSSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSSSSG---R----KISQN 730 (764)
Q Consensus 658 g~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~~~~---~----~~~~~ 730 (764)
|.+....... ......||+.|+|||++.+..++.++||||+||++|+|++|+.||.+....+.... . .....
T Consensus 163 g~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 241 (326)
T 2y0a_A 163 GLAHKIDFGN-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYF 241 (326)
T ss_dssp TTCEECCTTS-CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHTCCCCCHHHH
T ss_pred CCCeECCCCC-ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHhcCCCcCcccc
Confidence 9998765332 23345799999999999999999999999999999999999999976554221110 1 11112
Q ss_pred CCCcHHHHHHHhhhhccchh
Q 004268 731 PRLDLQCNAYLKNFSQGNHR 750 (764)
Q Consensus 731 ~~~~~~~~~~~~~~l~~~~~ 750 (764)
+..+..+.++++.|++.++.
T Consensus 242 ~~~~~~~~~li~~~L~~dP~ 261 (326)
T 2y0a_A 242 SNTSALAKDFIRRLLVKDPK 261 (326)
T ss_dssp TTSCHHHHHHHHHHSCSSGG
T ss_pred ccCCHHHHHHHHHHccCChh
Confidence 45788899999999998833
No 87
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=1.9e-37 Score=320.47 Aligned_cols=236 Identities=24% Similarity=0.366 Sum_probs=193.6
Q ss_pred hcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEEEEEE
Q 004268 508 EDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFLIY 586 (764)
Q Consensus 508 ~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 586 (764)
++|++.+.||+|+||+||+|.+. +++.||+|++....... ...+.+.+|++++++++||||+++++++.+++..++||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDE-GVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVF 80 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSST-THHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcC-CcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEE
Confidence 57999999999999999999865 78999999997655433 33467889999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeeccccccCCC
Q 004268 587 EYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLARLLHPD 666 (764)
Q Consensus 587 e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 666 (764)
||+++ ++.+.+.. ....+++..++.++.|++.||+||| ++||+||||||+||+++.++.+||+|||.+......
T Consensus 81 e~~~~-~l~~~~~~--~~~~l~~~~~~~~~~ql~~~l~~lH---~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 154 (292)
T 3o0g_A 81 EFCDQ-DLKKYFDS--CNGDLDPEIVKSFLFQLLKGLGFCH---SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIP 154 (292)
T ss_dssp ECCSE-EHHHHHHH--TTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCSC
T ss_pred ecCCC-CHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeecccceecCCc
Confidence 99986 55555543 2346899999999999999999999 889999999999999999999999999999877655
Q ss_pred CCCceecccccccccccccccCC-CCccchHHHHHHHHHHHHhCCCCC-Cccccccc-----------------------
Q 004268 667 SSNRTLVVGTYGYIAPELAYTMA-VTEKCDVYSFGVVALEVLMGSHPT-DLLSSLSS----------------------- 721 (764)
Q Consensus 667 ~~~~~~~~g~~~y~aPE~~~~~~-~~~~~DiwslG~il~~lltg~~Pf-~~~~~~~~----------------------- 721 (764)
........||+.|+|||++.+.. ++.++||||+||++|+|++|..|| .+.+..+.
T Consensus 155 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 234 (292)
T 3o0g_A 155 VRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLP 234 (292)
T ss_dssp CSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGST
T ss_pred cccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccc
Confidence 55555568899999999988766 799999999999999999988885 33221000
Q ss_pred ---------ccCCcCCCCCCCcHHHHHHHhhhhccchh
Q 004268 722 ---------SSGRKISQNPRLDLQCNAYLKNFSQGNHR 750 (764)
Q Consensus 722 ---------~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 750 (764)
.........+.++..+.+++++|++.++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~ 272 (292)
T 3o0g_A 235 DYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPV 272 (292)
T ss_dssp TCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGG
T ss_pred cccccccccCCcchhhcccccChHHHHHHHHHhccChh
Confidence 00011122345788999999999998833
No 88
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=8.9e-38 Score=320.63 Aligned_cols=251 Identities=25% Similarity=0.430 Sum_probs=184.1
Q ss_pred HhhcCCcceeeeecCceeEEEEEE-CCCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEEEE
Q 004268 506 ATEDFHIKYCIGTGGYGSVYRAQL-SSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFL 584 (764)
Q Consensus 506 ~~~~y~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 584 (764)
..++|++.+.||+|+||.||+|.. .+|+.||+|++...........+.+.+|++++++++||||+++++++.+.+..++
T Consensus 9 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 88 (278)
T 3cok_A 9 KIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYL 88 (278)
T ss_dssp SGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEE
T ss_pred ccccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEE
Confidence 357899999999999999999986 4799999999865432222224678899999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeeccccccC
Q 004268 585 IYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLARLLH 664 (764)
Q Consensus 585 v~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~ 664 (764)
||||+++++|.+++... ...+++..++.++.|++.||+||| ++||+||||||+||+++.++.+||+|||.+....
T Consensus 89 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~ 163 (278)
T 3cok_A 89 VLEMCHNGEMNRYLKNR--VKPFSENEARHFMHQIITGMLYLH---SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLK 163 (278)
T ss_dssp EEECCTTEEHHHHHHTC--SSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSSCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEecCCCCcHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEEEeecceeecc
Confidence 99999999999999743 346899999999999999999999 8899999999999999999999999999998765
Q ss_pred CCCCCceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCccccccccc---CCcCCCCCCCcHHHHHHH
Q 004268 665 PDSSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSSSS---GRKISQNPRLDLQCNAYL 741 (764)
Q Consensus 665 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 741 (764)
..........|++.|+|||++.+..++.++||||+|+++|+|++|+.||.......... ......+..++..+.+++
T Consensus 164 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 243 (278)
T 3cok_A 164 MPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPSFLSIEAKDLI 243 (278)
T ss_dssp ----------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----CCSSCCCCCTTSCHHHHHHH
T ss_pred CCCCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHHHHhhcccCCccccCHHHHHHH
Confidence 44433445678999999999999899999999999999999999999998655432221 122233455788999999
Q ss_pred hhhhccchhhH--HHhhhcCCC
Q 004268 742 KNFSQGNHRWE--NLLFKKFPY 761 (764)
Q Consensus 742 ~~~l~~~~~~~--~~~~~~~p~ 761 (764)
++|++.++.-| .......||
T Consensus 244 ~~~l~~dp~~Rps~~~~l~h~~ 265 (278)
T 3cok_A 244 HQLLRRNPADRLSLSSVLDHPF 265 (278)
T ss_dssp HHHSCSSGGGSCCHHHHTTSTT
T ss_pred HHHcccCHhhCCCHHHHhcCcc
Confidence 99999884433 333344443
No 89
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=2.6e-38 Score=326.24 Aligned_cols=235 Identities=27% Similarity=0.353 Sum_probs=190.2
Q ss_pred hcCCcceeeeecCceeEEEEEECCCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEEEEEEE
Q 004268 508 EDFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFLIYE 587 (764)
Q Consensus 508 ~~y~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 587 (764)
++|++.+.||+|+||+||+|+..+|+.||+|++....... ...+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDE-GIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFE 80 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGG-CCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEecccccc-ccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEE
Confidence 5799999999999999999998889999999987554321 123667899999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeeccccccCCCC
Q 004268 588 YMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLARLLHPDS 667 (764)
Q Consensus 588 ~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~ 667 (764)
|+++ +|.+++... ...+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||.+.......
T Consensus 81 ~~~~-~l~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 154 (288)
T 1ob3_A 81 HLDQ-DLKKLLDVC--EGGLESVTAKSFLLQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPV 154 (288)
T ss_dssp CCSE-EHHHHHHTS--TTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC--
T ss_pred ecCC-CHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEEeECccccccCccc
Confidence 9986 898888742 345889999999999999999999 8999999999999999999999999999998775444
Q ss_pred CCceecccccccccccccccC-CCCccchHHHHHHHHHHHHhCCCCCCcccccccccC----------------------
Q 004268 668 SNRTLVVGTYGYIAPELAYTM-AVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSSSSG---------------------- 724 (764)
Q Consensus 668 ~~~~~~~g~~~y~aPE~~~~~-~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~~~~---------------------- 724 (764)
.......+|+.|+|||++.+. .++.++||||+||++|+|++|+.||.+....+....
T Consensus 155 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (288)
T 1ob3_A 155 RKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKY 234 (288)
T ss_dssp -------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTC
T ss_pred cccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhccccc
Confidence 444456789999999998764 589999999999999999999999986543211000
Q ss_pred ---C-------cCCCCCCCcHHHHHHHhhhhccch
Q 004268 725 ---R-------KISQNPRLDLQCNAYLKNFSQGNH 749 (764)
Q Consensus 725 ---~-------~~~~~~~~~~~~~~~~~~~l~~~~ 749 (764)
. .......++..+.+++++|++.++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP 269 (288)
T 1ob3_A 235 DPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDP 269 (288)
T ss_dssp CTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSST
T ss_pred ccccccccCccHHHHhhhcCHHHHHHHHHHcCCCc
Confidence 0 001123467888999999998773
No 90
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=2.3e-37 Score=330.69 Aligned_cols=234 Identities=23% Similarity=0.348 Sum_probs=198.5
Q ss_pred hhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEEEEE
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFLI 585 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 585 (764)
.++|++.+.||+|+||+||+|... +|+.||+|++..... .....+.+|+++++.++||||+++++++.+....++|
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~---~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv 126 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYP---LDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLI 126 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSH---HHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccch---hhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEE
Confidence 578999999999999999999865 789999999875432 2236788999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecC--CCCEEEeeecccccc
Q 004268 586 YEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNS--NLEAFVADFGLARLL 663 (764)
Q Consensus 586 ~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~--~~~~kl~Dfg~~~~~ 663 (764)
|||+++++|.+++... ...+++..+..++.||+.||+||| ++||+||||||+||+++. .+.+||+|||++...
T Consensus 127 ~E~~~gg~L~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~ 201 (387)
T 1kob_A 127 LEFLSGGELFDRIAAE--DYKMSEAEVINYMRQACEGLKHMH---EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKL 201 (387)
T ss_dssp EECCCCCBHHHHTTCT--TCCBCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSTTCCCEEECCCTTCEEC
T ss_pred EEcCCCCcHHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccchHHeEEecCCCCceEEEecccceec
Confidence 9999999999998742 345899999999999999999999 899999999999999974 578999999999877
Q ss_pred CCCCCCceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCccccccccc-------CCcCCCCCCCcHH
Q 004268 664 HPDSSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSSSS-------GRKISQNPRLDLQ 736 (764)
Q Consensus 664 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~~~-------~~~~~~~~~~~~~ 736 (764)
.... ......||+.|+|||++.+..++.++||||+||++|+|++|+.||.+........ .........++..
T Consensus 202 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~ 280 (387)
T 1kob_A 202 NPDE-IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPE 280 (387)
T ss_dssp CTTS-CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCCSSTTTTSCHH
T ss_pred CCCc-ceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccccccCCHH
Confidence 5432 3344579999999999999999999999999999999999999998765422111 1112223467899
Q ss_pred HHHHHhhhhccch
Q 004268 737 CNAYLKNFSQGNH 749 (764)
Q Consensus 737 ~~~~~~~~l~~~~ 749 (764)
+.++++.|++.++
T Consensus 281 ~~~li~~~L~~dP 293 (387)
T 1kob_A 281 AKDFIKNLLQKEP 293 (387)
T ss_dssp HHHHHHTTSCSSG
T ss_pred HHHHHHHHcCCCh
Confidence 9999999999883
No 91
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=1.7e-37 Score=331.12 Aligned_cols=241 Identities=24% Similarity=0.388 Sum_probs=200.0
Q ss_pred hhcCCcceeeeecCceeEEEEEEC--------CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhc-CCCceeeEeeEEe
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLS--------SGKLVALKKLHRSETEEPAFLESFQTEARLLSQI-RHRNIVKLYGFCL 577 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~ 577 (764)
.++|++.+.||+|+||+||+|++. ++..||+|++.... .....+.+.+|+++++++ +||||+++++++.
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~ 157 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLLGACT 157 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTC--BHHHHHHHHHHHHHHHHSCCCTTBCCEEEEEC
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCc--CHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEc
Confidence 478999999999999999999752 35579999997653 334457899999999999 8999999999999
Q ss_pred eCCEEEEEEEecCCCCHHHHHhcCcc-------------ccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCe
Q 004268 578 HNKCMFLIYEYMERGSLFCVLRNDVE-------------AVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNI 644 (764)
Q Consensus 578 ~~~~~~lv~e~~~~~~L~~~l~~~~~-------------~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NI 644 (764)
+.+..|+||||+++|+|.+++..... ...+++..+..++.||+.||+||| ++||+||||||+||
T Consensus 158 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NI 234 (370)
T 2psq_A 158 QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNV 234 (370)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGE
T ss_pred cCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCeeccccchhhE
Confidence 99999999999999999999975421 235789999999999999999999 89999999999999
Q ss_pred eecCCCCEEEeeeccccccCCCCC--CceecccccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCccccccc
Q 004268 645 LLNSNLEAFVADFGLARLLHPDSS--NRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLM-GSHPTDLLSSLSS 721 (764)
Q Consensus 645 ll~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~llt-g~~Pf~~~~~~~~ 721 (764)
+++.++.+||+|||+++....... ......+++.|+|||++.+..++.++|||||||++|||++ |+.||.+....+.
T Consensus 235 ll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~ 314 (370)
T 2psq_A 235 LVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 314 (370)
T ss_dssp EECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH
T ss_pred EECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHH
Confidence 999999999999999987654322 1223456789999999999999999999999999999999 9999987654322
Q ss_pred cc----CCcCCCCCCCcHHHHHHHhhhhccchhhH
Q 004268 722 SS----GRKISQNPRLDLQCNAYLKNFSQGNHRWE 752 (764)
Q Consensus 722 ~~----~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 752 (764)
.. ......+...+..+.+++++|++.++.-|
T Consensus 315 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R 349 (370)
T 2psq_A 315 FKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQR 349 (370)
T ss_dssp HHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGS
T ss_pred HHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhC
Confidence 11 12233445678899999999998874433
No 92
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=7.1e-38 Score=324.77 Aligned_cols=236 Identities=22% Similarity=0.341 Sum_probs=191.8
Q ss_pred hhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCc-----------------------HHHHHHHHHHHHHHH
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEE-----------------------PAFLESFQTEARLLS 562 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~-----------------------~~~~~~~~~E~~~l~ 562 (764)
.++|++.+.||+|+||+||+|... +++.||+|++....... ....+.+.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 578999999999999999999864 78899999987654221 112356889999999
Q ss_pred hcCCCceeeEeeEEee--CCEEEEEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCC
Q 004268 563 QIRHRNIVKLYGFCLH--NKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDIS 640 (764)
Q Consensus 563 ~l~hpniv~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlk 640 (764)
+++||||+++++++.+ .+..++||||+++++|.++.. ...+++..+..++.||+.||+||| ++||+|||||
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlk 164 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT----LKPLSEDQARFYFQDLIKGIEYLH---YQKIIHRDIK 164 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC----SSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCC
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCC
Confidence 9999999999999987 568999999999999987653 346899999999999999999999 8899999999
Q ss_pred CCCeeecCCCCEEEeeeccccccCCCCCCceecccccccccccccccCC---CCccchHHHHHHHHHHHHhCCCCCCccc
Q 004268 641 SNNILLNSNLEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYTMA---VTEKCDVYSFGVVALEVLMGSHPTDLLS 717 (764)
Q Consensus 641 p~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~---~~~~~DiwslG~il~~lltg~~Pf~~~~ 717 (764)
|+||+++.++.+||+|||++..............||+.|+|||++.+.. ++.++||||+|+++|+|++|+.||.+..
T Consensus 165 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~ 244 (298)
T 2zv2_A 165 PSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDER 244 (298)
T ss_dssp GGGEEECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred HHHEEECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCcc
Confidence 9999999999999999999987765444444567999999999988765 3778999999999999999999998654
Q ss_pred ccccc-----cCCcCCCCCCCcHHHHHHHhhhhccch
Q 004268 718 SLSSS-----SGRKISQNPRLDLQCNAYLKNFSQGNH 749 (764)
Q Consensus 718 ~~~~~-----~~~~~~~~~~~~~~~~~~~~~~l~~~~ 749 (764)
..... ........+.++..+.+++++|++.++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp 281 (298)
T 2zv2_A 245 IMCLHSKIKSQALEFPDQPDIAEDLKDLITRMLDKNP 281 (298)
T ss_dssp HHHHHHHHHHCCCCCCSSSCCCHHHHHHHHHHTCSCT
T ss_pred HHHHHHHHhcccCCCCCccccCHHHHHHHHHHhhcCh
Confidence 32111 112223345688999999999998773
No 93
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=3.1e-37 Score=350.98 Aligned_cols=331 Identities=21% Similarity=0.183 Sum_probs=205.8
Q ss_pred CCCCcEEEcCCCcCcccCCccccCCCCCCEEEccCCcCcccCCcccCCCCCCCEEecCCCcccccCCccCcCCCCCCEEE
Q 004268 42 LSKLEKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLDLNLSNNILNGSIPLEFGNLKDLDQLR 121 (764)
Q Consensus 42 l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 121 (764)
+.+++.|++++|.++.+.+..|..+++|++|+|++|.|++..+..|..+++|++|+|++|.++++.+..|+++++|++|+
T Consensus 50 l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 129 (597)
T 3oja_B 50 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 129 (597)
T ss_dssp GCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEE
Confidence 34556666666666655555555666666666666666655555666666666666666666655555566666666666
Q ss_pred ccCCcCcccCCccccCCCCcCEEecccCcccccCCccccCCCCCCeeecccCCCCCCCCCccccCCCccEEEecCccCcC
Q 004268 122 LQGNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNLKSLFLDNNHLSGPIPSTLYHLNQLATLCLGYNKLVG 201 (764)
Q Consensus 122 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~ 201 (764)
|++|.++.+++..|.++++|++|+|++|.++++.+..|.++++|++|+|++|.++++. +..+++
T Consensus 130 L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~---~~~l~~------------- 193 (597)
T 3oja_B 130 LERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPS------------- 193 (597)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC---GGGCTT-------------
T ss_pred eeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC---hhhhhh-------------
Confidence 6666666555555566666666666666666555555666666666666666555331 333444
Q ss_pred CcccccCCccccceeeccCcccccccCccccCCCCCCEEEccCCcccCCCCcCCcCCCCCCeEEccCCcccCCCCccccC
Q 004268 202 PVTKEVGNMKNLDRLHLNGNNLTGSIPSTIGYLNLLDELHLSHNRLDGPIPPTIGNLTNLIALDLSSNQLSGLLPREVGN 281 (764)
Q Consensus 202 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 281 (764)
|+.|++++|.+++ +....+|+.|++++|.+....+.. .++|+.|+|++|.+++ +..+..
T Consensus 194 -----------L~~L~l~~n~l~~-----l~~~~~L~~L~ls~n~l~~~~~~~---~~~L~~L~L~~n~l~~--~~~l~~ 252 (597)
T 3oja_B 194 -----------LFHANVSYNLLST-----LAIPIAVEELDASHNSINVVRGPV---NVELTILKLQHNNLTD--TAWLLN 252 (597)
T ss_dssp -----------CSEEECCSSCCSE-----EECCTTCSEEECCSSCCCEEECSC---CSCCCEEECCSSCCCC--CGGGGG
T ss_pred -----------hhhhhcccCcccc-----ccCCchhheeeccCCccccccccc---CCCCCEEECCCCCCCC--Chhhcc
Confidence 4445555544442 223345566666666555332221 2466777777777664 255667
Q ss_pred CCCCCeEeccCccccCCCCCCCCCCCccceEEccCCcCccCCChhhhcccccceeeccccccccCCchhcccccccceee
Q 004268 282 LKYLASLSLNGNILIGPIPPTIGYLTNLTYLNLGYNRLSSSIPPELMNCSQLLNLVLSHNSLSGSIPSEIGNLIFFRQLD 361 (764)
Q Consensus 282 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ 361 (764)
+++|+.|+|++|.+.+..|..|..+++|+.|+|++|.+++ +|..+..+++|+.|+|++|.++ .+|..+..+++|+.|+
T Consensus 253 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~ 330 (597)
T 3oja_B 253 YPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLY 330 (597)
T ss_dssp CTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEE
T ss_pred CCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEE
Confidence 7777777777777776666677777777777777777774 4555566777888888888877 5666677788888888
Q ss_pred cccccccCCCCCCCCCCCccceecCCCCccccccC-CccccCccccccCCCCCC
Q 004268 362 LSRNFINGTIPSQLGKIPNISAVDLSKNNLSGVIP-ASVRRIPKLIVSENNLEL 414 (764)
Q Consensus 362 l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~-~~~~~~~~~~~~~n~~~~ 414 (764)
|++|++++.. +..+++|+.|++++|+++|... .++..+....+..+...|
T Consensus 331 L~~N~l~~~~---~~~~~~L~~L~l~~N~~~~~~~~~~~~~~~~~~~~~~~~~C 381 (597)
T 3oja_B 331 LDHNSIVTLK---LSTHHTLKNLTLSHNDWDCNSLRALFRNVARPAVDDADQHC 381 (597)
T ss_dssp CCSSCCCCCC---CCTTCCCSEEECCSSCEEHHHHHHHTTTCCTTTBCCCCCCC
T ss_pred CCCCCCCCcC---hhhcCCCCEEEeeCCCCCChhHHHHHHHHhhhccccccccC
Confidence 8888887542 6677888999999999987543 345555555554444433
No 94
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=7.1e-38 Score=327.39 Aligned_cols=206 Identities=24% Similarity=0.385 Sum_probs=164.3
Q ss_pred hhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEEEEE
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFLI 585 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 585 (764)
.++|++.+.||+|+||+||+|... +|+.||+|++........ .+.+.+|++++++++||||+++++++.+++..++|
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~--~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 81 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGT--PSTAIREISLMKELKHENIVRLYDVIHTENKLTLV 81 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCS--CHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeeccccccc--HHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEE
Confidence 578999999999999999999864 789999999875543221 25678999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhcCc---cccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeeccccc
Q 004268 586 YEYMERGSLFCVLRNDV---EAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLARL 662 (764)
Q Consensus 586 ~e~~~~~~L~~~l~~~~---~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~ 662 (764)
|||++ ++|.+++.... ....+++..+..++.||+.||+||| ++||+||||||+||+++.++.+||+|||.+..
T Consensus 82 ~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~ 157 (317)
T 2pmi_A 82 FEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCH---ENKILHRDLKPQNLLINKRGQLKLGDFGLARA 157 (317)
T ss_dssp EECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCSSCEE
T ss_pred EEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCChHHeEEcCCCCEEECcCcccee
Confidence 99998 59998886431 1235889999999999999999999 88999999999999999999999999999987
Q ss_pred cCCCCCCceecccccccccccccccC-CCCccchHHHHHHHHHHHHhCCCCCCcccc
Q 004268 663 LHPDSSNRTLVVGTYGYIAPELAYTM-AVTEKCDVYSFGVVALEVLMGSHPTDLLSS 718 (764)
Q Consensus 663 ~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~DiwslG~il~~lltg~~Pf~~~~~ 718 (764)
............||+.|+|||++.+. .++.++||||+||++|+|++|+.||.+...
T Consensus 158 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~ 214 (317)
T 2pmi_A 158 FGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTND 214 (317)
T ss_dssp TTSCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred cCCCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh
Confidence 75444444456789999999998764 689999999999999999999999976543
No 95
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=1.8e-38 Score=331.30 Aligned_cols=236 Identities=25% Similarity=0.407 Sum_probs=193.3
Q ss_pred hhcCCcceeeeecCceeEEEEEE-CCCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCC----E
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQL-SSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNK----C 581 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~----~ 581 (764)
.++|++.+.||+|+||+||+|++ .+++.||+|++.............+.+|++++++++||||+++++++.... .
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 57899999999999999999986 578999999998876666666788999999999999999999999987654 3
Q ss_pred EEEEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeecccc
Q 004268 582 MFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLAR 661 (764)
Q Consensus 582 ~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~ 661 (764)
.|+||||+++++|.+++.. ...+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||.+.
T Consensus 91 ~~lv~e~~~g~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~ 164 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHT---EGPMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIAR 164 (311)
T ss_dssp EEEEEECCCEEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEETTSCEEECCCSCC-
T ss_pred cEEEEecCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH---HCCCCcCCCCHHHEEEcCCCCEEEeeccCcc
Confidence 5999999999999999973 346899999999999999999999 8899999999999999999999999999998
Q ss_pred ccCCCCC---CceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccccccccCC-------cCCCCC
Q 004268 662 LLHPDSS---NRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSSSSGR-------KISQNP 731 (764)
Q Consensus 662 ~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~~~~~-------~~~~~~ 731 (764)
....... ......|++.|+|||++.+..++.++||||+|+++|+|++|+.||.+.......... .....+
T Consensus 165 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (311)
T 3ork_A 165 AIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHE 244 (311)
T ss_dssp -----------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCHHHHST
T ss_pred cccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCcccccC
Confidence 7643322 123356899999999999999999999999999999999999999876543221111 111134
Q ss_pred CCcHHHHHHHhhhhccc
Q 004268 732 RLDLQCNAYLKNFSQGN 748 (764)
Q Consensus 732 ~~~~~~~~~~~~~l~~~ 748 (764)
.++..+.+++++|++.+
T Consensus 245 ~~~~~l~~li~~~l~~d 261 (311)
T 3ork_A 245 GLSADLDAVVLKALAKN 261 (311)
T ss_dssp TCCHHHHHHHHHHTCSS
T ss_pred CCCHHHHHHHHHHHhcC
Confidence 57889999999999987
No 96
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=5.1e-38 Score=343.50 Aligned_cols=235 Identities=25% Similarity=0.395 Sum_probs=200.2
Q ss_pred hhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEEEEE
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFLI 585 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 585 (764)
.++|.+.+.||+|+||.||+|++. +|+.||+|++...........+.+.+|+++++.++||||+++++++.+.+..|+|
T Consensus 15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv 94 (476)
T 2y94_A 15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMV 94 (476)
T ss_dssp ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 578999999999999999999875 8999999998754322222346788999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeeccccccCC
Q 004268 586 YEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLARLLHP 665 (764)
Q Consensus 586 ~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 665 (764)
|||+++++|.+++.. ...+++..++.++.||+.||+||| ++||+||||||+||+++.++.+||+|||++.....
T Consensus 95 ~E~~~gg~L~~~l~~---~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~ 168 (476)
T 2y94_A 95 MEYVSGGELFDYICK---NGRLDEKESRRLFQQILSGVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD 168 (476)
T ss_dssp EECCSSEEHHHHTTS---SSSCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEECTTCCEEECCCSSCEECCT
T ss_pred EeCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH---HCCCCcccccHHHEEEecCCCeEEEeccchhhccc
Confidence 999999999999973 446899999999999999999999 99999999999999999999999999999987654
Q ss_pred CCCCceecccccccccccccccCCC-CccchHHHHHHHHHHHHhCCCCCCccccccc---ccCCcCCCCCCCcHHHHHHH
Q 004268 666 DSSNRTLVVGTYGYIAPELAYTMAV-TEKCDVYSFGVVALEVLMGSHPTDLLSSLSS---SSGRKISQNPRLDLQCNAYL 741 (764)
Q Consensus 666 ~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~DiwslG~il~~lltg~~Pf~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 741 (764)
. ......+||+.|+|||++.+..+ +.++||||+||++|+|++|+.||++...... ........+..++..+.+++
T Consensus 169 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~Li 247 (476)
T 2y94_A 169 G-EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQYLNPSVISLL 247 (476)
T ss_dssp T-CCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHHHHTTCCCCCTTCCHHHHHHH
T ss_pred c-ccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCcCCCccCCHHHHHHH
Confidence 3 23345689999999999998876 6899999999999999999999987654221 11222334455789999999
Q ss_pred hhhhccc
Q 004268 742 KNFSQGN 748 (764)
Q Consensus 742 ~~~l~~~ 748 (764)
++|++.+
T Consensus 248 ~~~L~~d 254 (476)
T 2y94_A 248 KHMLQVD 254 (476)
T ss_dssp HHHTCSS
T ss_pred HHHcCCC
Confidence 9999987
No 97
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=1.3e-37 Score=330.86 Aligned_cols=231 Identities=26% Similarity=0.372 Sum_probs=186.3
Q ss_pred hhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEEEEE
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFLI 585 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 585 (764)
.++|++.+.||+|+||+||+|+.. +++.||+|++....... +.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~----~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 94 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAID----ENVQREIINHRSLRHPNIVRFKEVILTPTHLAII 94 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSC----HHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcccc----HHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEE
Confidence 578999999999999999999876 89999999997655443 5678999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCC--EEEeeecccccc
Q 004268 586 YEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLE--AFVADFGLARLL 663 (764)
Q Consensus 586 ~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~--~kl~Dfg~~~~~ 663 (764)
|||+++|+|.+++.. ...+++..++.++.|++.||+||| ++||+||||||+||+++.++. +||+|||+++..
T Consensus 95 ~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~ql~~~L~~LH---~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~ 168 (361)
T 3uc3_A 95 MEYASGGELYERICN---AGRFSEDEARFFFQQLLSGVSYCH---SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSS 168 (361)
T ss_dssp EECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHH---HTTCCSCCCCGGGEEECSSSSCCEEECCCCCC---
T ss_pred EEeCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCceEEEeecCccccc
Confidence 999999999999873 346899999999999999999999 899999999999999987665 999999999754
Q ss_pred CCCCCCceecccccccccccccccCCCCcc-chHHHHHHHHHHHHhCCCCCCcccccccc---------cCCcCCCCCCC
Q 004268 664 HPDSSNRTLVVGTYGYIAPELAYTMAVTEK-CDVYSFGVVALEVLMGSHPTDLLSSLSSS---------SGRKISQNPRL 733 (764)
Q Consensus 664 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~-~DiwslG~il~~lltg~~Pf~~~~~~~~~---------~~~~~~~~~~~ 733 (764)
... .......||+.|+|||++.+..++.+ +||||+||++|+|++|+.||.+....... ..........+
T Consensus 169 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (361)
T 3uc3_A 169 VLH-SQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRI 247 (361)
T ss_dssp -------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCCCCCTTSCC
T ss_pred ccc-CCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCCCCCCcCCC
Confidence 322 22334579999999999988888665 89999999999999999999875542211 11223334457
Q ss_pred cHHHHHHHhhhhccc
Q 004268 734 DLQCNAYLKNFSQGN 748 (764)
Q Consensus 734 ~~~~~~~~~~~l~~~ 748 (764)
+..+.+++++|++.+
T Consensus 248 s~~~~~li~~~L~~d 262 (361)
T 3uc3_A 248 SPECCHLISRIFVAD 262 (361)
T ss_dssp CHHHHHHHHHHSCSC
T ss_pred CHHHHHHHHHHccCC
Confidence 899999999999987
No 98
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=4.2e-37 Score=318.38 Aligned_cols=236 Identities=22% Similarity=0.388 Sum_probs=205.2
Q ss_pred hhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEEEEE
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFLI 585 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 585 (764)
.++|++.+.||+|+||+||+|.+. +++.||+|++...........+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 93 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 93 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence 578999999999999999999865 6889999999876655566678899999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeeccccccCC
Q 004268 586 YEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLARLLHP 665 (764)
Q Consensus 586 ~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 665 (764)
|||+++++|.+++.. ...+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||.+.....
T Consensus 94 ~e~~~~~~L~~~~~~---~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~ 167 (294)
T 2rku_A 94 LELCRRRSLLELHKR---RKALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY 167 (294)
T ss_dssp EECCTTCBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECCS
T ss_pred EecCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEcCCCCEEEEeccCceeccc
Confidence 999999999998873 346899999999999999999999 88999999999999999999999999999987764
Q ss_pred CCCCceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCccccccc---ccCCcCCCCCCCcHHHHHHHh
Q 004268 666 DSSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSS---SSGRKISQNPRLDLQCNAYLK 742 (764)
Q Consensus 666 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 742 (764)
.........|++.|+|||++.+..++.++||||+|+++|+|++|+.||......+. ........+..++..+.++++
T Consensus 168 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 247 (294)
T 2rku_A 168 DGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQ 247 (294)
T ss_dssp TTCCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCTTSCHHHHHHHH
T ss_pred CccccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhhccCCCccccCHHHHHHHH
Confidence 44445556789999999999999999999999999999999999999987543221 112223345567889999999
Q ss_pred hhhccc
Q 004268 743 NFSQGN 748 (764)
Q Consensus 743 ~~l~~~ 748 (764)
+|++.+
T Consensus 248 ~~l~~~ 253 (294)
T 2rku_A 248 KMLQTD 253 (294)
T ss_dssp HHTCSS
T ss_pred HHcccC
Confidence 999987
No 99
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=8.7e-38 Score=329.73 Aligned_cols=251 Identities=20% Similarity=0.292 Sum_probs=198.6
Q ss_pred HhhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCC----
Q 004268 506 ATEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNK---- 580 (764)
Q Consensus 506 ~~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~---- 580 (764)
..++|++.+.||+|+||.||+|+++ +|+.||+|++....... ..+.+.+|++++++++||||+++++++.+..
T Consensus 4 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~ 81 (332)
T 3qd2_B 4 YLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNREL--AREKVMREVKALAKLEHPGIVRYFNAWLETPPEKW 81 (332)
T ss_dssp HHHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTT--HHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHH
T ss_pred hhhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchh
Confidence 4688999999999999999999876 89999999997654332 3478899999999999999999999886543
Q ss_pred -----------------------------------------------------EEEEEEEecCCCCHHHHHhcCcccccc
Q 004268 581 -----------------------------------------------------CMFLIYEYMERGSLFCVLRNDVEAVEL 607 (764)
Q Consensus 581 -----------------------------------------------------~~~lv~e~~~~~~L~~~l~~~~~~~~l 607 (764)
..++||||+++++|.+++.........
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~ 161 (332)
T 3qd2_B 82 QEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDR 161 (332)
T ss_dssp HHHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGS
T ss_pred hhhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccch
Confidence 389999999999999999876666667
Q ss_pred CHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeeccccccCCCCC------------Cceeccc
Q 004268 608 DWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLARLLHPDSS------------NRTLVVG 675 (764)
Q Consensus 608 ~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~------------~~~~~~g 675 (764)
++..+..++.||+.||+||| ++||+||||||+||+++.++.+||+|||+++....... ......|
T Consensus 162 ~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~g 238 (332)
T 3qd2_B 162 EHGVCLHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVG 238 (332)
T ss_dssp CHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-
T ss_pred hhHHHHHHHHHHHHHHHHHH---hCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCC
Confidence 78889999999999999999 89999999999999999999999999999987754321 1233578
Q ss_pred ccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccccccccCCc--CCCCCCCcHHHHHHHhhhhccchhhH-
Q 004268 676 TYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSSSSGRK--ISQNPRLDLQCNAYLKNFSQGNHRWE- 752 (764)
Q Consensus 676 ~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~- 752 (764)
|+.|+|||++.+..++.++||||+|+++|+|++|..|+............. ....+..+....+++++|++.++.-|
T Consensus 239 t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp 318 (332)
T 3qd2_B 239 TKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVRIITDVRNLKFPLLFTQKYPQEHMMVQDMLSPSPTERP 318 (332)
T ss_dssp CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHTTCCCHHHHHHCHHHHHHHHHHHCSSGGGSC
T ss_pred CcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHHHHHHHhhccCCCcccccCChhHHHHHHHHccCCCCcCC
Confidence 999999999999999999999999999999999998875433221111111 11112235677889999998874333
Q ss_pred -HHhhhcCCC
Q 004268 753 -NLLFKKFPY 761 (764)
Q Consensus 753 -~~~~~~~p~ 761 (764)
.....+.||
T Consensus 319 s~~~~l~~~~ 328 (332)
T 3qd2_B 319 EATDIIENAI 328 (332)
T ss_dssp CHHHHHHSTT
T ss_pred CHHHHhhchh
Confidence 444444444
No 100
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=6.6e-38 Score=358.36 Aligned_cols=238 Identities=21% Similarity=0.316 Sum_probs=203.4
Q ss_pred HhhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhc-CCCceeeEeeEEeeCCEEE
Q 004268 506 ATEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQI-RHRNIVKLYGFCLHNKCMF 583 (764)
Q Consensus 506 ~~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~ 583 (764)
..++|++.+.||+|+||.||+|+++ +++.||+|++.+.........+.+..|.+++..+ +||+|+++++++.+.+..|
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~ 418 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 418 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence 4578999999999999999999865 7889999998754322222236678899999888 7999999999999999999
Q ss_pred EEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeecccccc
Q 004268 584 LIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLARLL 663 (764)
Q Consensus 584 lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~ 663 (764)
+||||+++|+|..++.. ...+++..++.++.||+.||+||| ++||+||||||+|||++.++.+||+|||+++..
T Consensus 419 lV~E~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH---~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~ 492 (674)
T 3pfq_A 419 FVMEYVNGGDLMYHIQQ---VGRFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKEN 492 (674)
T ss_dssp EEEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHH---HTSEECCCCCSTTEEECSSSCEEECCCTTCEEC
T ss_pred EEEeCcCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH---hCCeEeccCChhhEEEcCCCcEEEeecceeecc
Confidence 99999999999999974 346899999999999999999999 899999999999999999999999999999875
Q ss_pred CCCCCCceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCccccccc---ccCCcCCCCCCCcHHHHHH
Q 004268 664 HPDSSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSS---SSGRKISQNPRLDLQCNAY 740 (764)
Q Consensus 664 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 740 (764)
..........+||+.|+|||++.+..|+.++||||+||++|||++|+.||.+.+..+. ........+..++..+.++
T Consensus 493 ~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~l 572 (674)
T 3pfq_A 493 IWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVAI 572 (674)
T ss_dssp CCTTCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHSSCCCCCTTSCHHHHHH
T ss_pred ccCCcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCCccCCHHHHHH
Confidence 5444455567899999999999999999999999999999999999999987655322 2233444556789999999
Q ss_pred Hhhhhccch
Q 004268 741 LKNFSQGNH 749 (764)
Q Consensus 741 ~~~~l~~~~ 749 (764)
++.|++.++
T Consensus 573 i~~lL~~dP 581 (674)
T 3pfq_A 573 CKGLMTKHP 581 (674)
T ss_dssp HHHHSCSSS
T ss_pred HHHHccCCH
Confidence 999999873
No 101
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=3.1e-37 Score=332.48 Aligned_cols=207 Identities=18% Similarity=0.308 Sum_probs=181.0
Q ss_pred hhcCCcceeeeec--CceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEEE
Q 004268 507 TEDFHIKYCIGTG--GYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCMF 583 (764)
Q Consensus 507 ~~~y~~~~~ig~G--~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 583 (764)
.++|++.+.||+| +||+||+|+.. +|+.||+|++...... ....+.+.+|++++++++||||+++++++.+.+..|
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 102 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACS-NEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELW 102 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccC-hHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEE
Confidence 5789999999999 99999999876 7999999999765543 345678889999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeecccccc
Q 004268 584 LIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLARLL 663 (764)
Q Consensus 584 lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~ 663 (764)
+||||+++++|.+++... ....+++..++.++.||+.||+||| ++||+||||||+||+++.++.+||+|||.+...
T Consensus 103 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~ 178 (389)
T 3gni_B 103 VVTSFMAYGSAKDLICTH-FMDGMNELAIAYILQGVLKALDYIH---HMGYVHRSVKASHILISVDGKVYLSGLRSNLSM 178 (389)
T ss_dssp EEEECCTTCBHHHHHHHT-CTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred EEEEccCCCCHHHHHhhh-cccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEcccccceee
Confidence 999999999999999754 2345899999999999999999999 899999999999999999999999999988654
Q ss_pred CCCC-------CCceeccccccccccccccc--CCCCccchHHHHHHHHHHHHhCCCCCCcccc
Q 004268 664 HPDS-------SNRTLVVGTYGYIAPELAYT--MAVTEKCDVYSFGVVALEVLMGSHPTDLLSS 718 (764)
Q Consensus 664 ~~~~-------~~~~~~~g~~~y~aPE~~~~--~~~~~~~DiwslG~il~~lltg~~Pf~~~~~ 718 (764)
.... .......||+.|+|||++.+ ..++.++||||+||++|+|++|+.||.+...
T Consensus 179 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~ 242 (389)
T 3gni_B 179 ISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPA 242 (389)
T ss_dssp EETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCS
T ss_pred ccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCH
Confidence 2211 11223478999999999987 6789999999999999999999999987554
No 102
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=2.7e-37 Score=325.72 Aligned_cols=236 Identities=22% Similarity=0.388 Sum_probs=205.0
Q ss_pred hhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEEEEE
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFLI 585 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 585 (764)
.++|.+.+.||+|+||.||+|.+. +++.||+|++...........+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 119 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 119 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 578999999999999999999865 6889999999876655566678899999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeeccccccCC
Q 004268 586 YEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLARLLHP 665 (764)
Q Consensus 586 ~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 665 (764)
|||+++++|.+++.. ...+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||.+.....
T Consensus 120 ~e~~~~~~L~~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 193 (335)
T 2owb_A 120 LELCRRRSLLELHKR---RKALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY 193 (335)
T ss_dssp ECCCTTCBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEECCS
T ss_pred EecCCCCCHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHH---HCCCEecCCCchhEEEcCCCCEEEeeccCceeccc
Confidence 999999999999873 346899999999999999999999 88999999999999999999999999999987764
Q ss_pred CCCCceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCccccccc---ccCCcCCCCCCCcHHHHHHHh
Q 004268 666 DSSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSS---SSGRKISQNPRLDLQCNAYLK 742 (764)
Q Consensus 666 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 742 (764)
.........|++.|+|||++.+..++.++||||+|+++|+|++|+.||......+. ...........++..+.++++
T Consensus 194 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 273 (335)
T 2owb_A 194 DGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQ 273 (335)
T ss_dssp TTCCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCTTSCHHHHHHHH
T ss_pred CcccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHhcCCCCCCccCCHHHHHHHH
Confidence 44445556799999999999999999999999999999999999999986543221 111223344567889999999
Q ss_pred hhhccc
Q 004268 743 NFSQGN 748 (764)
Q Consensus 743 ~~l~~~ 748 (764)
+|++.+
T Consensus 274 ~~l~~d 279 (335)
T 2owb_A 274 KMLQTD 279 (335)
T ss_dssp HHTCSS
T ss_pred HHccCC
Confidence 999987
No 103
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=3.1e-37 Score=326.46 Aligned_cols=232 Identities=25% Similarity=0.340 Sum_probs=181.3
Q ss_pred HhhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEEEE
Q 004268 506 ATEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFL 584 (764)
Q Consensus 506 ~~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 584 (764)
..++|++.+.||+|+||+||+|++. +++.||+|++..... .+.+.+|++++++++||||+++++++.+.+..++
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 125 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVD-----KKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISL 125 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC---------------CHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccchh-----HHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEE
Confidence 3578999999999999999999876 688999999976432 2667899999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecC---CCCEEEeeecccc
Q 004268 585 IYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNS---NLEAFVADFGLAR 661 (764)
Q Consensus 585 v~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~---~~~~kl~Dfg~~~ 661 (764)
||||+++++|.+++.. ...+++..+..++.|++.||+||| ++||+||||||+||+++. ++.+||+|||+++
T Consensus 126 v~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~ 199 (349)
T 2w4o_A 126 VLELVTGGELFDRIVE---KGYYSERDAADAVKQILEAVAYLH---ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSK 199 (349)
T ss_dssp EECCCCSCBHHHHHTT---CSSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEESSSSTTCCEEECCCC---
T ss_pred EEEeCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCcccEEEecCCCCCCEEEccCcccc
Confidence 9999999999999974 345899999999999999999999 889999999999999975 8899999999998
Q ss_pred ccCCCCCCceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCccccccc----ccC----CcCCCCCCC
Q 004268 662 LLHPDSSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSS----SSG----RKISQNPRL 733 (764)
Q Consensus 662 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~----~~~----~~~~~~~~~ 733 (764)
..... .......||+.|+|||++.+..++.++||||+||++|+|++|+.||........ ... ......+.+
T Consensus 200 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 278 (349)
T 2w4o_A 200 IVEHQ-VLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEV 278 (349)
T ss_dssp --------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCCCCCTTTTTTS
T ss_pred ccCcc-cccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCCccCCchhhhC
Confidence 76432 223346789999999999999999999999999999999999999976543211 011 111223467
Q ss_pred cHHHHHHHhhhhccch
Q 004268 734 DLQCNAYLKNFSQGNH 749 (764)
Q Consensus 734 ~~~~~~~~~~~l~~~~ 749 (764)
+..+.+++++|++.++
T Consensus 279 ~~~~~~li~~~L~~dP 294 (349)
T 2w4o_A 279 SLNAKDLVRKLIVLDP 294 (349)
T ss_dssp CHHHHHHHHTTSCSSG
T ss_pred CHHHHHHHHHHccCCh
Confidence 8899999999999883
No 104
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.2e-37 Score=327.66 Aligned_cols=235 Identities=23% Similarity=0.327 Sum_probs=199.6
Q ss_pred HHhhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcH-----HHHHHHHHHHHHHHhcCCCceeeEeeEEee
Q 004268 505 EATEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEP-----AFLESFQTEARLLSQIRHRNIVKLYGFCLH 578 (764)
Q Consensus 505 ~~~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~-----~~~~~~~~E~~~l~~l~hpniv~~~~~~~~ 578 (764)
+..++|++.+.||+|+||+||+|.+. +++.||+|++........ ...+.+.+|++++++++||||+++++++.+
T Consensus 21 ~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~ 100 (335)
T 3dls_A 21 EYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFEN 100 (335)
T ss_dssp HHHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEEC
T ss_pred ccccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEee
Confidence 45689999999999999999999854 788999999976543221 112456789999999999999999999999
Q ss_pred CCEEEEEEEecCCC-CHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeee
Q 004268 579 NKCMFLIYEYMERG-SLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADF 657 (764)
Q Consensus 579 ~~~~~lv~e~~~~~-~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Df 657 (764)
.+..++||||+.+| +|.+++.. ...+++..+..++.||+.||+||| ++||+||||||+||+++.++.+||+||
T Consensus 101 ~~~~~lv~e~~~~g~~l~~~~~~---~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~Df 174 (335)
T 3dls_A 101 QGFFQLVMEKHGSGLDLFAFIDR---HPRLDEPLASYIFRQLVSAVGYLR---LKDIIHRDIKDENIVIAEDFTIKLIDF 174 (335)
T ss_dssp SSEEEEEEECCTTSCBHHHHHHT---CCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCC
T ss_pred CCEEEEEEEeCCCCccHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH---hCCeEEeccCHHHEEEcCCCcEEEeec
Confidence 99999999999777 99999974 346899999999999999999999 889999999999999999999999999
Q ss_pred ccccccCCCCCCceecccccccccccccccCCC-CccchHHHHHHHHHHHHhCCCCCCcccccccccCCcCCCCCCCcHH
Q 004268 658 GLARLLHPDSSNRTLVVGTYGYIAPELAYTMAV-TEKCDVYSFGVVALEVLMGSHPTDLLSSLSSSSGRKISQNPRLDLQ 736 (764)
Q Consensus 658 g~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~DiwslG~il~~lltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 736 (764)
|.+....... ......||+.|+|||++.+..+ +.++||||+|+++|+|++|+.||...... .......+..++..
T Consensus 175 g~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~---~~~~~~~~~~~~~~ 250 (335)
T 3dls_A 175 GSAAYLERGK-LFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET---VEAAIHPPYLVSKE 250 (335)
T ss_dssp TTCEECCTTC-CBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG---TTTCCCCSSCCCHH
T ss_pred ccceECCCCC-ceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH---HhhccCCCcccCHH
Confidence 9998765433 2344679999999999988877 78999999999999999999999865442 22333445557899
Q ss_pred HHHHHhhhhccch
Q 004268 737 CNAYLKNFSQGNH 749 (764)
Q Consensus 737 ~~~~~~~~l~~~~ 749 (764)
+.++++.|++.++
T Consensus 251 l~~li~~~L~~dP 263 (335)
T 3dls_A 251 LMSLVSGLLQPVP 263 (335)
T ss_dssp HHHHHHHHTCSSG
T ss_pred HHHHHHHHccCCh
Confidence 9999999999883
No 105
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=2e-37 Score=324.81 Aligned_cols=239 Identities=28% Similarity=0.413 Sum_probs=197.5
Q ss_pred hhcCCcceeeeecCceeEEEEEEC----CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEE
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLS----SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCM 582 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 582 (764)
.++|++.+.||+|+||+||+|.+. .+..||+|++..... ....+.+.+|++++++++||||+++++++.+.+..
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 125 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYT--ERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLA 125 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCC--HHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCC
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCC--HHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCcc
Confidence 468999999999999999999864 344699999976543 33457889999999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeeccccc
Q 004268 583 FLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLARL 662 (764)
Q Consensus 583 ~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~ 662 (764)
++||||+++++|.++++.. ...+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+++.
T Consensus 126 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 200 (325)
T 3kul_A 126 MIVTEYMENGSLDTFLRTH--DGQFTIMQLVGMLRGVGAGMRYLS---DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRV 200 (325)
T ss_dssp EEEEECCTTCBHHHHHHTT--TTCSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCSSCEE
T ss_pred EEEeeCCCCCcHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCcceEEECCCCCEEECCCCcccc
Confidence 9999999999999999642 346899999999999999999999 89999999999999999999999999999987
Q ss_pred cCCCCCCc---eecccccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccccccc----cCCcCCCCCCCc
Q 004268 663 LHPDSSNR---TLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLM-GSHPTDLLSSLSSS----SGRKISQNPRLD 734 (764)
Q Consensus 663 ~~~~~~~~---~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~llt-g~~Pf~~~~~~~~~----~~~~~~~~~~~~ 734 (764)
........ ....+|+.|+|||++.+..++.++||||+|+++|+|++ |+.||.+....+.. .......+...+
T Consensus 201 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (325)
T 3kul_A 201 LEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPAPMGCP 280 (325)
T ss_dssp CC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTCCCCCCTTCC
T ss_pred cccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCCCCCCCCcC
Confidence 65432221 22345778999999999999999999999999999999 99999876553221 122334455678
Q ss_pred HHHHHHHhhhhccchhhH
Q 004268 735 LQCNAYLKNFSQGNHRWE 752 (764)
Q Consensus 735 ~~~~~~~~~~l~~~~~~~ 752 (764)
..+.+++..|++.++.-|
T Consensus 281 ~~l~~li~~~l~~dp~~R 298 (325)
T 3kul_A 281 HALHQLMLDCWHKDRAQR 298 (325)
T ss_dssp HHHHHHHHHHTCSSGGGS
T ss_pred HHHHHHHHHHccCChhhC
Confidence 899999999999874433
No 106
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=1.5e-36 Score=322.22 Aligned_cols=307 Identities=26% Similarity=0.395 Sum_probs=176.7
Q ss_pred ccCCCCCcEEEcCCCcCcccCCccccCCCCCCEEEccCCcCcccCCcccCCCCCCCEEecCCCcccccCCccCcCCCCCC
Q 004268 39 IGALSKLEKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLDLNLSNNILNGSIPLEFGNLKDLD 118 (764)
Q Consensus 39 ~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 118 (764)
+..+++|++|++++|.++.+ + .+..+++|++|++++|+++... . +..+++|++|+|++|.++.+ ..|.++++|+
T Consensus 40 ~~~l~~L~~L~l~~~~i~~~-~-~~~~~~~L~~L~l~~n~i~~~~-~-~~~l~~L~~L~L~~n~i~~~--~~~~~l~~L~ 113 (347)
T 4fmz_A 40 QEELESITKLVVAGEKVASI-Q-GIEYLTNLEYLNLNGNQITDIS-P-LSNLVKLTNLYIGTNKITDI--SALQNLTNLR 113 (347)
T ss_dssp HHHHTTCSEEECCSSCCCCC-T-TGGGCTTCCEEECCSSCCCCCG-G-GTTCTTCCEEECCSSCCCCC--GGGTTCTTCS
T ss_pred chhcccccEEEEeCCccccc-h-hhhhcCCccEEEccCCccccch-h-hhcCCcCCEEEccCCcccCc--hHHcCCCcCC
Confidence 44566777777777777643 2 3666777777777777776432 2 66777777777777776643 2466677777
Q ss_pred EEEccCCcCcccCCccccCCCCcCEEecccCcccccCCccccCCCCCCeeecccCCCCCCCCCccccCCCccEEEecCcc
Q 004268 119 QLRLQGNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNLKSLFLDNNHLSGPIPSTLYHLNQLATLCLGYNK 198 (764)
Q Consensus 119 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~ 198 (764)
+|++++|.+..+.+ +..+++|++|++++|..... ...+..+++|++|++++|.+.++.+ +..+++|++|++++|.
T Consensus 114 ~L~l~~n~i~~~~~--~~~l~~L~~L~l~~n~~~~~-~~~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~ 188 (347)
T 4fmz_A 114 ELYLNEDNISDISP--LANLTKMYSLNLGANHNLSD-LSPLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQ 188 (347)
T ss_dssp EEECTTSCCCCCGG--GTTCTTCCEEECTTCTTCCC-CGGGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSC
T ss_pred EEECcCCcccCchh--hccCCceeEEECCCCCCccc-ccchhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCc
Confidence 77777777665533 66666777777776644322 2336666666666666666654322 4555555555555555
Q ss_pred CcCCcccccCCccccceeeccCcccccccCccccCCCCCCEEEccCCcccCCCCcCCcCCCCCCeEEccCCcccCCCCcc
Q 004268 199 LVGPVTKEVGNMKNLDRLHLNGNNLTGSIPSTIGYLNLLDELHLSHNRLDGPIPPTIGNLTNLIALDLSSNQLSGLLPRE 278 (764)
Q Consensus 199 i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 278 (764)
+..+.. +..+++|+.|++++ |.+.+..+ +..+++|+.|++++|.+++..+
T Consensus 189 l~~~~~--~~~l~~L~~L~l~~------------------------n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~-- 238 (347)
T 4fmz_A 189 IEDISP--LASLTSLHYFTAYV------------------------NQITDITP--VANMTRLNSLKIGNNKITDLSP-- 238 (347)
T ss_dssp CCCCGG--GGGCTTCCEEECCS------------------------SCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--
T ss_pred cccccc--ccCCCccceeeccc------------------------CCCCCCch--hhcCCcCCEEEccCCccCCCcc--
Confidence 554332 44444444554444 44443322 4444555555555555543322
Q ss_pred ccCCCCCCeEeccCccccCCCCCCCCCCCccceEEccCCcCccCCChhhhcccccceeeccccccccCCchhcccccccc
Q 004268 279 VGNLKYLASLSLNGNILIGPIPPTIGYLTNLTYLNLGYNRLSSSIPPELMNCSQLLNLVLSHNSLSGSIPSEIGNLIFFR 358 (764)
Q Consensus 279 ~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~ 358 (764)
+..+++|+.|++++|.+.+. ..+..+++|++|++++|++++. +.+..+++|++|++++|++++..+..+..+++|+
T Consensus 239 ~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~ 314 (347)
T 4fmz_A 239 LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLT 314 (347)
T ss_dssp GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCS
T ss_pred hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCC
Confidence 45555555555555555432 2355556666666666666533 3455666666666666666655566666666666
Q ss_pred eeecccccccCCCCCCCCCCCccceecCCCCccc
Q 004268 359 QLDLSRNFINGTIPSQLGKIPNISAVDLSKNNLS 392 (764)
Q Consensus 359 ~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~ 392 (764)
.|+|++|++++..| +..+++|+.|++++|+++
T Consensus 315 ~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 315 TLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp EEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred EEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 66666666665544 556666666666666654
No 107
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.2e-37 Score=318.97 Aligned_cols=235 Identities=24% Similarity=0.355 Sum_probs=176.6
Q ss_pred hhcCCcceeeeecCceeEEEEEE-CCCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEEEEE
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQL-SSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFLI 585 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 585 (764)
.++|++.+.||+|+||+||+|.+ .+++.||+|++...........+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 12 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 91 (275)
T 2eue_A 12 IGNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp CCCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEE
T ss_pred ccceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEE
Confidence 47899999999999999999985 47899999999876655544457889999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeeccccccCC
Q 004268 586 YEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLARLLHP 665 (764)
Q Consensus 586 ~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 665 (764)
|||+ ++++.+++.. ...+++..+..++.|++.||+||| ++||+||||||+||++++++.+||+|||.+.....
T Consensus 92 ~e~~-~~~l~~~~~~---~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 164 (275)
T 2eue_A 92 IEYA-GNELFDYIVQ---RDKMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD 164 (275)
T ss_dssp EECC-CEEHHHHHHT---SSSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTSCEEECCSSCC-----
T ss_pred ehhc-CCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH---HCCCeeccCChHhEEECCCCCEEEeecccceeccC
Confidence 9999 5688887763 345899999999999999999999 88999999999999999999999999999976643
Q ss_pred CCCCceecccccccccccccccCCC-CccchHHHHHHHHHHHHhCCCCCCccccccc---ccCCcCCCCCCCcHHHHHHH
Q 004268 666 DSSNRTLVVGTYGYIAPELAYTMAV-TEKCDVYSFGVVALEVLMGSHPTDLLSSLSS---SSGRKISQNPRLDLQCNAYL 741 (764)
Q Consensus 666 ~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~DiwslG~il~~lltg~~Pf~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 741 (764)
.. ......|++.|+|||++.+..+ ++++||||+|+++|+|++|+.||........ ........+...+..+.+++
T Consensus 165 ~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 243 (275)
T 2eue_A 165 GN-FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLI 243 (275)
T ss_dssp -----------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTSCHHHHHHH
T ss_pred cc-cccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccCCHHHHHHH
Confidence 32 2334578999999999988766 7899999999999999999999987654221 11223334556789999999
Q ss_pred hhhhccch
Q 004268 742 KNFSQGNH 749 (764)
Q Consensus 742 ~~~l~~~~ 749 (764)
++|++.++
T Consensus 244 ~~~l~~dP 251 (275)
T 2eue_A 244 KRMLIVNP 251 (275)
T ss_dssp HHHSCSSG
T ss_pred HHHhhcCH
Confidence 99999883
No 108
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=3.1e-37 Score=314.71 Aligned_cols=237 Identities=22% Similarity=0.394 Sum_probs=200.1
Q ss_pred hhcCCcceeeeecCceeEEEEEECCCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEEEEEE
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFLIY 586 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 586 (764)
.++|++.+.||+|+||+||+|+.+++..||+|++....... +.+.+|++++++++||||+++++++.+.+..++||
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~----~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 82 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSE----DEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVT 82 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTBCH----HHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEE
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCCcH----HHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEE
Confidence 57899999999999999999998888899999997665442 66889999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeeccccccCCC
Q 004268 587 EYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLARLLHPD 666 (764)
Q Consensus 587 e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 666 (764)
||+++++|.+++... ...+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||.+......
T Consensus 83 e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~ 157 (268)
T 3sxs_A 83 EYISNGCLLNYLRSH--GKGLEPSQLLEMCYDVCEGMAFLE---SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDD 157 (268)
T ss_dssp ECCTTCBHHHHHHHH--GGGCCHHHHHHHHHHHHHHHHHHH---HTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTT
T ss_pred EccCCCcHHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCcCcceEEECCCCCEEEccCccceecchh
Confidence 999999999999743 335899999999999999999999 899999999999999999999999999999876433
Q ss_pred CCC-ceecccccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccccccc----cCCcCCCCCCCcHHHHHH
Q 004268 667 SSN-RTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLM-GSHPTDLLSSLSSS----SGRKISQNPRLDLQCNAY 740 (764)
Q Consensus 667 ~~~-~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~llt-g~~Pf~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 740 (764)
... .....+++.|+|||++.+..++.++||||+|+++|+|++ |+.||+........ .......+...+..+.++
T Consensus 158 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 237 (268)
T 3sxs_A 158 QYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRPHLASDTIYQI 237 (268)
T ss_dssp CEEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCTTSCHHHHHH
T ss_pred hhhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHHHcCCCCCCCCcChHHHHHH
Confidence 221 122345678999999999899999999999999999999 99999876653221 122333344568899999
Q ss_pred HhhhhccchhhH
Q 004268 741 LKNFSQGNHRWE 752 (764)
Q Consensus 741 ~~~~l~~~~~~~ 752 (764)
++.|++.++.-|
T Consensus 238 i~~~l~~~p~~R 249 (268)
T 3sxs_A 238 MYSCWHELPEKR 249 (268)
T ss_dssp HHHTTCSSGGGS
T ss_pred HHHHcCCChhhC
Confidence 999999874433
No 109
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=1.2e-37 Score=326.48 Aligned_cols=230 Identities=24% Similarity=0.365 Sum_probs=171.4
Q ss_pred hhcCCcc---eeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcC-CCceeeEeeEEeeCCE
Q 004268 507 TEDFHIK---YCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIR-HRNIVKLYGFCLHNKC 581 (764)
Q Consensus 507 ~~~y~~~---~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~ 581 (764)
.++|++. +.||+|+||+||+|.+. +++.||+|++.... ...+.+|+.+++.+. ||||+++++++.+...
T Consensus 7 ~~~y~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~ 80 (325)
T 3kn6_A 7 YQHYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKRM------EANTQKEITALKLCEGHPNIVKLHEVFHDQLH 80 (325)
T ss_dssp HHHEEECTTSCCSEEETTEEEEEEEETTTCCEEEEEEEEGGG------HHHHHHHHHHHHHTTTCTTBCCEEEEEECSSE
T ss_pred hhccccccCCCccccCCCeEEEEEEECCCCCEEEEEEEChhh------hhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCE
Confidence 3455554 78999999999999865 78999999986432 266789999999997 9999999999999999
Q ss_pred EEEEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCC---CEEEeeec
Q 004268 582 MFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNL---EAFVADFG 658 (764)
Q Consensus 582 ~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~---~~kl~Dfg 658 (764)
.|+||||+++++|.+++.. ...+++..+..++.|++.||+||| ++||+||||||+||+++.++ .+||+|||
T Consensus 81 ~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg 154 (325)
T 3kn6_A 81 TFLVMELLNGGELFERIKK---KKHFSETEASYIMRKLVSAVSHMH---DVGVVHRDLKPENLLFTDENDNLEIKIIDFG 154 (325)
T ss_dssp EEEEECCCCSCBHHHHHHH---CSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEC----CEEEECCCT
T ss_pred EEEEEEccCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH---HCCCeecCCCHHHEEEecCCCcccEEEeccc
Confidence 9999999999999999974 346899999999999999999999 89999999999999998765 89999999
Q ss_pred cccccCCCCCCceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCccccccc----------ccCCcCC
Q 004268 659 LARLLHPDSSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSS----------SSGRKIS 728 (764)
Q Consensus 659 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~----------~~~~~~~ 728 (764)
.+..............||+.|+|||++.+..++.++||||+|+++|+|++|+.||........ .......
T Consensus 155 ~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~ 234 (325)
T 3kn6_A 155 FARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFS 234 (325)
T ss_dssp TCEECCC----------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCC
T ss_pred cceecCCCCCcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCC
Confidence 998766555555566789999999999999999999999999999999999999986543110 0111111
Q ss_pred C----CCCCcHHHHHHHhhhhccc
Q 004268 729 Q----NPRLDLQCNAYLKNFSQGN 748 (764)
Q Consensus 729 ~----~~~~~~~~~~~~~~~l~~~ 748 (764)
. .+.++..+.++++.|++.+
T Consensus 235 ~~~~~~~~~s~~~~~li~~~L~~d 258 (325)
T 3kn6_A 235 FEGEAWKNVSQEAKDLIQGLLTVD 258 (325)
T ss_dssp CCSHHHHTSCHHHHHHHHHHHCCC
T ss_pred CCcccccCCCHHHHHHHHHHCCCC
Confidence 1 1246889999999999877
No 110
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=1.9e-37 Score=331.05 Aligned_cols=232 Identities=15% Similarity=0.169 Sum_probs=192.3
Q ss_pred hhcCCcceeeeecCceeEEEEE------ECCCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcC---CCceeeEeeEEe
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQ------LSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIR---HRNIVKLYGFCL 577 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~------~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~---hpniv~~~~~~~ 577 (764)
.++|++.+.||+|+||+||+|. ..+++.||+|++.... ...+.+|+++++.++ |+||+++++++.
T Consensus 64 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~------~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~ 137 (365)
T 3e7e_A 64 SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN------PWEFYIGTQLMERLKPSMQHMFMKFYSAHL 137 (365)
T ss_dssp SSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC------HHHHHHHHHHHHHSCGGGGGGBCCEEEEEE
T ss_pred CEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC------hhHHHHHHHHHHHhhhhhhhhhhhhheeee
Confidence 5789999999999999999993 4578999999987543 256778888888886 999999999999
Q ss_pred eCCEEEEEEEecCCCCHHHHHhcCc--cccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecC-------
Q 004268 578 HNKCMFLIYEYMERGSLFCVLRNDV--EAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNS------- 648 (764)
Q Consensus 578 ~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~------- 648 (764)
..+..++||||+++|+|.+++.... ....+++..++.++.||+.||+||| ++||+||||||+|||++.
T Consensus 138 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH---~~~ivHrDiKp~NIll~~~~~~~~~ 214 (365)
T 3e7e_A 138 FQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVH---DCEIIHGDIKPDNFILGNGFLEQDD 214 (365)
T ss_dssp CSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECGGGTCC--
T ss_pred cCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHh---hCCeecCCCCHHHEEecccccCccc
Confidence 9999999999999999999997422 2346999999999999999999999 999999999999999998
Q ss_pred ----CCCEEEeeeccccccCC--CCCCceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccccccc
Q 004268 649 ----NLEAFVADFGLARLLHP--DSSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSSS 722 (764)
Q Consensus 649 ----~~~~kl~Dfg~~~~~~~--~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~~ 722 (764)
++.+||+|||+|+.+.. ........+||+.|+|||++.+..++.++||||+||++|||+||+.||.........
T Consensus 215 ~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~ 294 (365)
T 3e7e_A 215 EDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECK 294 (365)
T ss_dssp ----CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEEE
T ss_pred cccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCcee
Confidence 89999999999976532 222334567999999999999999999999999999999999999999755443222
Q ss_pred cCCcCCCCCCCcHHHHHHHhhhhccc
Q 004268 723 SGRKISQNPRLDLQCNAYLKNFSQGN 748 (764)
Q Consensus 723 ~~~~~~~~~~~~~~~~~~~~~~l~~~ 748 (764)
... .......+..+.+++..|++.+
T Consensus 295 ~~~-~~~~~~~~~~~~~~~~~~l~~~ 319 (365)
T 3e7e_A 295 PEG-LFRRLPHLDMWNEFFHVMLNIP 319 (365)
T ss_dssp ECS-CCTTCSSHHHHHHHHHHHHCCC
T ss_pred ech-hccccCcHHHHHHHHHHHcCCC
Confidence 111 1222245778888888888866
No 111
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1.8e-37 Score=316.60 Aligned_cols=237 Identities=24% Similarity=0.400 Sum_probs=200.3
Q ss_pred hhcCCcceeeeecCceeEEEEEECCCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEEEEEE
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFLIY 586 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 586 (764)
.++|++.+.||+|+||+||+|.+.+++.||+|++....... +.+.+|++++++++||||+++++++.+.+..++||
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~----~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 84 (269)
T 4hcu_A 9 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE----EDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVF 84 (269)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSBCH----HHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEE
T ss_pred hhhceeeheecCCCccEEEEEEecCCCeEEEEEecccccCH----HHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEE
Confidence 47899999999999999999998889999999998765443 66889999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeeccccccCCC
Q 004268 587 EYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLARLLHPD 666 (764)
Q Consensus 587 e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 666 (764)
||+++++|.+++... ...+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||.+......
T Consensus 85 e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 159 (269)
T 4hcu_A 85 EFMEHGCLSDYLRTQ--RGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD 159 (269)
T ss_dssp ECCTTCBHHHHHHTT--TTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCH
T ss_pred EeCCCCcHHHHHHhc--CcccCHHHHHHHHHHHHHHHHHHH---hCCeecCCcchheEEEcCCCCEEecccccccccccc
Confidence 999999999999743 345899999999999999999999 899999999999999999999999999999865432
Q ss_pred C-CCceecccccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccccccc----cCCcCCCCCCCcHHHHHH
Q 004268 667 S-SNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLM-GSHPTDLLSSLSSS----SGRKISQNPRLDLQCNAY 740 (764)
Q Consensus 667 ~-~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~llt-g~~Pf~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 740 (764)
. .......+++.|+|||++.+..++.++||||+|+++|+|++ |+.||......+.. .......+...+..+.++
T Consensus 160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 239 (269)
T 4hcu_A 160 QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQI 239 (269)
T ss_dssp HHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTSCHHHHHH
T ss_pred ccccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhcCccCCCCCcCCHHHHHH
Confidence 1 11122456778999999999999999999999999999999 99999876553221 122333445568899999
Q ss_pred HhhhhccchhhH
Q 004268 741 LKNFSQGNHRWE 752 (764)
Q Consensus 741 ~~~~l~~~~~~~ 752 (764)
++.|++.++.-|
T Consensus 240 i~~~l~~~p~~R 251 (269)
T 4hcu_A 240 MNHCWRERPEDR 251 (269)
T ss_dssp HHHHTCSSGGGS
T ss_pred HHHHccCCcccC
Confidence 999998874443
No 112
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=1.1e-36 Score=333.04 Aligned_cols=328 Identities=25% Similarity=0.265 Sum_probs=158.6
Q ss_pred cccCCCeeEEEeCCCCccccCCccccCCCCC-------------cEEEcCCCcCcccCCccccCCCCCCEEEccCCcCcc
Q 004268 15 FTCFPNLVTFRIWGTLLSGRMPSEIGALSKL-------------EKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTG 81 (764)
Q Consensus 15 ~~~~~~l~~L~l~~~~~~~~~~~~~~~l~~L-------------~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~ 81 (764)
|..+++|+.|++++|.+++.+|..++.+++| ++|++++|.++++ |.. .++|++|++++|.+++
T Consensus 30 i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~l-p~~---~~~L~~L~l~~n~l~~ 105 (454)
T 1jl5_A 30 AENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSSL-PEL---PPHLESLVASCNSLTE 105 (454)
T ss_dssp ----CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSCC-CSC---CTTCSEEECCSSCCSS
T ss_pred HhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCccccC-CCC---cCCCCEEEccCCcCCc
Confidence 5555566666666666665666655555543 5555555555532 221 2455555555555553
Q ss_pred cCCcccCCCCCCCEEecCCCcccccCCccCcCCCCCCEEEccCCcCcccCCccccCCCCcCEEecccCcccccCCccccC
Q 004268 82 TIPSEIGSLRDLLDLNLSNNILNGSIPLEFGNLKDLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEVGN 161 (764)
Q Consensus 82 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 161 (764)
+|.. +++|++|++++|.++++.. . .++|++|++++|+++++ | .|.++++|++|++++|+++++ |..
T Consensus 106 -lp~~---~~~L~~L~l~~n~l~~l~~-~---~~~L~~L~L~~n~l~~l-p-~~~~l~~L~~L~l~~N~l~~l-p~~--- 171 (454)
T 1jl5_A 106 -LPEL---PQSLKSLLVDNNNLKALSD-L---PPLLEYLGVSNNQLEKL-P-ELQNSSFLKIIDVDNNSLKKL-PDL--- 171 (454)
T ss_dssp -CCCC---CTTCCEEECCSSCCSCCCS-C---CTTCCEEECCSSCCSSC-C-CCTTCTTCCEEECCSSCCSCC-CCC---
T ss_pred -cccc---cCCCcEEECCCCccCcccC-C---CCCCCEEECcCCCCCCC-c-ccCCCCCCCEEECCCCcCccc-CCC---
Confidence 3322 2455555555555553211 0 14555555555555543 2 355555555555555555532 221
Q ss_pred CCCCCeeecccCCCCCCCCCccccCCCccEEEecCccCcCCcccccCCccccceeeccCcccccccCccccCCCCCCEEE
Q 004268 162 LKNLKSLFLDNNHLSGPIPSTLYHLNQLATLCLGYNKLVGPVTKEVGNMKNLDRLHLNGNNLTGSIPSTIGYLNLLDELH 241 (764)
Q Consensus 162 l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 241 (764)
..+|++|++++|.++++ + .+..+++|+.|++++|++..++. ..++|++|++++|.++. .| .+..+++|+.|+
T Consensus 172 ~~~L~~L~L~~n~l~~l-~-~~~~l~~L~~L~l~~N~l~~l~~----~~~~L~~L~l~~n~l~~-lp-~~~~l~~L~~L~ 243 (454)
T 1jl5_A 172 PPSLEFIAAGNNQLEEL-P-ELQNLPFLTAIYADNNSLKKLPD----LPLSLESIVAGNNILEE-LP-ELQNLPFLTTIY 243 (454)
T ss_dssp CTTCCEEECCSSCCSSC-C-CCTTCTTCCEEECCSSCCSSCCC----CCTTCCEEECCSSCCSS-CC-CCTTCTTCCEEE
T ss_pred cccccEEECcCCcCCcC-c-cccCCCCCCEEECCCCcCCcCCC----CcCcccEEECcCCcCCc-cc-ccCCCCCCCEEE
Confidence 13555555555555542 2 35555555555555555554321 11355555555555552 23 255555555555
Q ss_pred ccCCcccCCCCcCCcCCCCCCeEEccCCcccCCCCccccCCCCCCeEeccCccccCCCCCCCCCCCccceEEccCCcCcc
Q 004268 242 LSHNRLDGPIPPTIGNLTNLIALDLSSNQLSGLLPREVGNLKYLASLSLNGNILIGPIPPTIGYLTNLTYLNLGYNRLSS 321 (764)
Q Consensus 242 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~ 321 (764)
+++|++++. |.. +++|+.|++++|+++++ |.. .++|+.|++++|++.+.. . ..++|++|++++|++++
T Consensus 244 l~~N~l~~l-~~~---~~~L~~L~l~~N~l~~l-~~~---~~~L~~L~ls~N~l~~l~-~---~~~~L~~L~l~~N~l~~ 311 (454)
T 1jl5_A 244 ADNNLLKTL-PDL---PPSLEALNVRDNYLTDL-PEL---PQSLTFLDVSENIFSGLS-E---LPPNLYYLNASSNEIRS 311 (454)
T ss_dssp CCSSCCSSC-CSC---CTTCCEEECCSSCCSCC-CCC---CTTCCEEECCSSCCSEES-C---CCTTCCEEECCSSCCSE
T ss_pred CCCCcCCcc-ccc---ccccCEEECCCCccccc-Ccc---cCcCCEEECcCCccCccc-C---cCCcCCEEECcCCcCCc
Confidence 555555532 221 24555555555555532 211 245555555555554311 0 01344444444444442
Q ss_pred CCChhhhcc-cccceeeccccccccCCchhcccccccceeecccccccCCCCCCCCCCCccceecCCCCcccc
Q 004268 322 SIPPELMNC-SQLLNLVLSHNSLSGSIPSEIGNLIFFRQLDLSRNFINGTIPSQLGKIPNISAVDLSKNNLSG 393 (764)
Q Consensus 322 ~~~~~~~~l-~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~ 393 (764)
. + .+ ++|++|++++|++++ +|.. +++|+.|++++|+++. +|. .+++|+.|++++|++++
T Consensus 312 i-~----~~~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~~-lp~---~l~~L~~L~L~~N~l~~ 371 (454)
T 1jl5_A 312 L-C----DLPPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLAE-VPE---LPQNLKQLHVEYNPLRE 371 (454)
T ss_dssp E-C----CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSS
T ss_pred c-c----CCcCcCCEEECCCCcccc-cccc---CCcCCEEECCCCcccc-ccc---hhhhccEEECCCCCCCc
Confidence 1 1 11 355556666665553 3322 3455566666665553 333 24555566666666555
No 113
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=7.6e-38 Score=329.09 Aligned_cols=219 Identities=41% Similarity=0.713 Sum_probs=187.8
Q ss_pred CCccCHHHHHHHhhcCCcceeeeecCceeEEEEEECCCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEee
Q 004268 495 DGRITFEEMIEATEDFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG 574 (764)
Q Consensus 495 ~~~~~~~~~~~~~~~y~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~ 574 (764)
...+++.++....++|++.+.||+|+||+||+|+.++++.||+|++........ ...+.+|+++++.++||||+++++
T Consensus 17 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~--~~~~~~e~~~l~~l~h~~iv~~~~ 94 (326)
T 3uim_A 17 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGG--ELQFQTEVEMISMAVHRNLLRLRG 94 (326)
T ss_dssp CEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----C--CCHHHHHHHGGGTCCCTTBCCCCE
T ss_pred cceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchH--HHHHHHHHHHHHhccCCCccceEE
Confidence 345788899999999999999999999999999988899999999976543321 136889999999999999999999
Q ss_pred EEeeCCEEEEEEEecCCCCHHHHHhcCc-cccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEE
Q 004268 575 FCLHNKCMFLIYEYMERGSLFCVLRNDV-EAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAF 653 (764)
Q Consensus 575 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~k 653 (764)
++.+.+..++||||+++++|.+++.... ....+++..+..++.|++.||+|||..+..||+||||||+||+++.++.+|
T Consensus 95 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~k 174 (326)
T 3uim_A 95 FCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV 174 (326)
T ss_dssp EECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEE
T ss_pred EEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEE
Confidence 9999999999999999999999998643 233589999999999999999999932222999999999999999999999
Q ss_pred EeeeccccccCCCCCC-ceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCc
Q 004268 654 VADFGLARLLHPDSSN-RTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDL 715 (764)
Q Consensus 654 l~Dfg~~~~~~~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~ 715 (764)
|+|||.+......... .....||+.|+|||++.+..++.++||||+|+++|+|++|+.||+.
T Consensus 175 l~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 237 (326)
T 3uim_A 175 VGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDL 237 (326)
T ss_dssp ECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCH
T ss_pred eccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccc
Confidence 9999999876533322 2335689999999999998999999999999999999999999963
No 114
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=1.4e-37 Score=319.35 Aligned_cols=234 Identities=30% Similarity=0.487 Sum_probs=196.1
Q ss_pred hhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEEEEE
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFLI 585 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 585 (764)
.++|++.+.||+|+||+||+|.+. +++.||+|++...........+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 87 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 87 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence 578999999999999999999765 6789999998654333222346788999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeeccccccCC
Q 004268 586 YEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLARLLHP 665 (764)
Q Consensus 586 ~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 665 (764)
|||+++++|.+++.. ...+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||.+.....
T Consensus 88 ~e~~~~~~l~~~l~~---~~~~~~~~~~~~~~qi~~~l~~LH---~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~ 161 (279)
T 3fdn_A 88 LEYAPLGTVYRELQK---LSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS 161 (279)
T ss_dssp ECCCTTEEHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHH---TTTCEECCCCGGGEEECTTSCEEECSCCEESCC--
T ss_pred EecCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH---hCCEecccCChHhEEEcCCCCEEEEeccccccCCc
Confidence 999999999999873 345899999999999999999999 99999999999999999999999999999865432
Q ss_pred CCCCceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCccccccc---ccCCcCCCCCCCcHHHHHHHh
Q 004268 666 DSSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSS---SSGRKISQNPRLDLQCNAYLK 742 (764)
Q Consensus 666 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 742 (764)
. ......|++.|+|||++.+..++.++||||+|+++|+|++|+.||........ ........+...+..+.++++
T Consensus 162 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 239 (279)
T 3fdn_A 162 S--RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLIS 239 (279)
T ss_dssp --------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCTTSCHHHHHHHH
T ss_pred c--cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHHhCCCCCCCcCCHHHHHHHH
Confidence 2 23345789999999999999999999999999999999999999986654322 122233345557889999999
Q ss_pred hhhccc
Q 004268 743 NFSQGN 748 (764)
Q Consensus 743 ~~l~~~ 748 (764)
+|++.+
T Consensus 240 ~~l~~~ 245 (279)
T 3fdn_A 240 RLLKHN 245 (279)
T ss_dssp HHCCSS
T ss_pred HHhccC
Confidence 999987
No 115
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=2.5e-37 Score=325.56 Aligned_cols=231 Identities=21% Similarity=0.318 Sum_probs=193.6
Q ss_pred HHhhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhc-CCCceeeEeeEEeeCCEE
Q 004268 505 EATEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQI-RHRNIVKLYGFCLHNKCM 582 (764)
Q Consensus 505 ~~~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~ 582 (764)
...++|++.+.||+|+||.||+|.++ +++.||+|++...... ..+|++++.++ +||||+++++++.+.+..
T Consensus 19 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-------~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~ 91 (342)
T 2qr7_A 19 QFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRD-------PTEEIEILLRYGQHPNIITLKDVYDDGKYV 91 (342)
T ss_dssp CHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCC-------CHHHHHHHHHHTTSTTBCCEEEEEECSSEE
T ss_pred CccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCC-------hHHHHHHHHHhcCCCCcCeEEEEEEcCCEE
Confidence 35688999999999999999999865 7889999999765433 24688888888 799999999999999999
Q ss_pred EEEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCC----CCEEEeeec
Q 004268 583 FLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSN----LEAFVADFG 658 (764)
Q Consensus 583 ~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~----~~~kl~Dfg 658 (764)
|+||||+++|+|.+++.. ...+++..+..++.||+.||+||| ++||+||||||+||++.+. +.+||+|||
T Consensus 92 ~lv~E~~~gg~L~~~i~~---~~~~~~~~~~~~~~qi~~al~~lH---~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg 165 (342)
T 2qr7_A 92 YVVTELMKGGELLDKILR---QKFFSEREASAVLFTITKTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFG 165 (342)
T ss_dssp EEEECCCCSCBHHHHHHT---CTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESSSSCSGGGEEECCCT
T ss_pred EEEEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH---HCCcEeccCCHHHEEEecCCCCcCeEEEEECC
Confidence 999999999999999974 346899999999999999999999 8999999999999998533 359999999
Q ss_pred cccccCCCCCCceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCccccccc------c----cCCcCC
Q 004268 659 LARLLHPDSSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSS------S----SGRKIS 728 (764)
Q Consensus 659 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~------~----~~~~~~ 728 (764)
++.............+||+.|+|||++.+..++.++||||+||++|+|++|+.||........ . ......
T Consensus 166 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~ 245 (342)
T 2qr7_A 166 FAKQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGG 245 (342)
T ss_dssp TCEECBCTTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCCCCCST
T ss_pred CcccCcCCCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCCcccCcc
Confidence 998776555445567889999999999988899999999999999999999999985322110 0 011111
Q ss_pred CCCCCcHHHHHHHhhhhccc
Q 004268 729 QNPRLDLQCNAYLKNFSQGN 748 (764)
Q Consensus 729 ~~~~~~~~~~~~~~~~l~~~ 748 (764)
..+.++..+.+++++|++.+
T Consensus 246 ~~~~~s~~~~~li~~~L~~d 265 (342)
T 2qr7_A 246 YWNSVSDTAKDLVSKMLHVD 265 (342)
T ss_dssp TTTTSCHHHHHHHHHHTCSS
T ss_pred ccccCCHHHHHHHHHHCCCC
Confidence 23568899999999999987
No 116
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=1.7e-36 Score=331.30 Aligned_cols=348 Identities=25% Similarity=0.272 Sum_probs=270.6
Q ss_pred CCCeeEEEeCCCCccccCCccccCCCCCcEEEcCCCcCcccCCccccCCCCC-------------CEEEccCCcCcccCC
Q 004268 18 FPNLVTFRIWGTLLSGRMPSEIGALSKLEKLVLSHNSLTGRIPSEIGALSRL-------------KVLDLSYNRLTGTIP 84 (764)
Q Consensus 18 ~~~l~~L~l~~~~~~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L-------------~~L~L~~n~i~~~~~ 84 (764)
...|+.|++++|.+ +.+|++++.+++|++|++++|.+++..|..+..+++| ++|++++|.+++ +|
T Consensus 10 ~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~-lp 87 (454)
T 1jl5_A 10 NTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSS-LP 87 (454)
T ss_dssp -------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSC-CC
T ss_pred cccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCcccc-CC
Confidence 47899999999999 7999999999999999999999999999999998865 999999999995 44
Q ss_pred cccCCCCCCCEEecCCCcccccCCccCcCCCCCCEEEccCCcCcccCCccccCCCCcCEEecccCcccccCCccccCCCC
Q 004268 85 SEIGSLRDLLDLNLSNNILNGSIPLEFGNLKDLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKN 164 (764)
Q Consensus 85 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 164 (764)
.. .++|++|+|++|.+++ .|.. +++|++|++++|+++++.. + .++|++|++++|+++++ | .|.++++
T Consensus 88 ~~---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~l~~--~--~~~L~~L~L~~n~l~~l-p-~~~~l~~ 154 (454)
T 1jl5_A 88 EL---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKALSD--L--PPLLEYLGVSNNQLEKL-P-ELQNSSF 154 (454)
T ss_dssp SC---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSCCCS--C--CTTCCEEECCSSCCSSC-C-CCTTCTT
T ss_pred CC---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCcccC--C--CCCCCEEECcCCCCCCC-c-ccCCCCC
Confidence 42 3789999999999997 4433 4899999999999997532 1 27999999999999974 4 6999999
Q ss_pred CCeeecccCCCCCCCCCccccCCCccEEEecCccCcCCcccccCCccccceeeccCcccccccCccccCCCCCCEEEccC
Q 004268 165 LKSLFLDNNHLSGPIPSTLYHLNQLATLCLGYNKLVGPVTKEVGNMKNLDRLHLNGNNLTGSIPSTIGYLNLLDELHLSH 244 (764)
Q Consensus 165 L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 244 (764)
|++|++++|+++++. .. ..+|++|++++|++..+. .+..+++|++|++++|.+++. |.. .++|++|++++
T Consensus 155 L~~L~l~~N~l~~lp-~~---~~~L~~L~L~~n~l~~l~--~~~~l~~L~~L~l~~N~l~~l-~~~---~~~L~~L~l~~ 224 (454)
T 1jl5_A 155 LKIIDVDNNSLKKLP-DL---PPSLEFIAAGNNQLEELP--ELQNLPFLTAIYADNNSLKKL-PDL---PLSLESIVAGN 224 (454)
T ss_dssp CCEEECCSSCCSCCC-CC---CTTCCEEECCSSCCSSCC--CCTTCTTCCEEECCSSCCSSC-CCC---CTTCCEEECCS
T ss_pred CCEEECCCCcCcccC-CC---cccccEEECcCCcCCcCc--cccCCCCCCEEECCCCcCCcC-CCC---cCcccEEECcC
Confidence 999999999998643 32 359999999999999864 589999999999999999963 332 36899999999
Q ss_pred CcccCCCCcCCcCCCCCCeEEccCCcccCCCCccccCCCCCCeEeccCccccCCCCCCCCCCCccceEEccCCcCccCCC
Q 004268 245 NRLDGPIPPTIGNLTNLIALDLSSNQLSGLLPREVGNLKYLASLSLNGNILIGPIPPTIGYLTNLTYLNLGYNRLSSSIP 324 (764)
Q Consensus 245 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~ 324 (764)
|.++ ..| .++.+++|+.|++++|+++++. . .+++|+.|++++|++.+ +|.. +++|++|++++|++++. |
T Consensus 225 n~l~-~lp-~~~~l~~L~~L~l~~N~l~~l~-~---~~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~l-~ 293 (454)
T 1jl5_A 225 NILE-ELP-ELQNLPFLTTIYADNNLLKTLP-D---LPPSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSGL-S 293 (454)
T ss_dssp SCCS-SCC-CCTTCTTCCEEECCSSCCSSCC-S---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSEE-S
T ss_pred CcCC-ccc-ccCCCCCCCEEECCCCcCCccc-c---cccccCEEECCCCcccc-cCcc---cCcCCEEECcCCccCcc-c
Confidence 9999 455 4899999999999999998643 2 24899999999999986 4433 48999999999999963 2
Q ss_pred hhhhcccccceeeccccccccCCchhcccc-cccceeecccccccCCCCCCCCCCCccceecCCCCccccccCCccccCc
Q 004268 325 PELMNCSQLLNLVLSHNSLSGSIPSEIGNL-IFFRQLDLSRNFINGTIPSQLGKIPNISAVDLSKNNLSGVIPASVRRIP 403 (764)
Q Consensus 325 ~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l-~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~ 403 (764)
. + .++|++|++++|++++. + .+ .+|+.|++++|++++ +|.. +++|+.|++++|.+++. |..+..+.
T Consensus 294 ~-~--~~~L~~L~l~~N~l~~i-~----~~~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~~l-p~~l~~L~ 360 (454)
T 1jl5_A 294 E-L--PPNLYYLNASSNEIRSL-C----DLPPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLAEV-PELPQNLK 360 (454)
T ss_dssp C-C--CTTCCEEECCSSCCSEE-C----CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSCC-CCCCTTCC
T ss_pred C-c--CCcCCEEECcCCcCCcc-c----CCcCcCCEEECCCCcccc-cccc---CCcCCEEECCCCccccc-cchhhhcc
Confidence 1 1 26899999999999852 2 33 589999999999996 5544 58999999999999965 44788999
Q ss_pred cccccCCCCCC
Q 004268 404 KLIVSENNLEL 414 (764)
Q Consensus 404 ~~~~~~n~~~~ 414 (764)
.+++++|++..
T Consensus 361 ~L~L~~N~l~~ 371 (454)
T 1jl5_A 361 QLHVEYNPLRE 371 (454)
T ss_dssp EEECCSSCCSS
T ss_pred EEECCCCCCCc
Confidence 99999999866
No 117
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=2.7e-37 Score=322.65 Aligned_cols=235 Identities=28% Similarity=0.384 Sum_probs=190.8
Q ss_pred hhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEEEEE
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFLI 585 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 585 (764)
.++|++.+.||+|+||+||+|.+. +|+.||+|++..... .....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (311)
T 4agu_A 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESED-DPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLV 80 (311)
T ss_dssp -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC--HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeecccc-chHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEE
Confidence 468999999999999999999875 699999999876543 334457788999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeeccccccCC
Q 004268 586 YEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLARLLHP 665 (764)
Q Consensus 586 ~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 665 (764)
|||++++++..++.. ...+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||.+.....
T Consensus 81 ~e~~~~~~l~~~~~~---~~~~~~~~~~~i~~~l~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 154 (311)
T 4agu_A 81 FEYCDHTVLHELDRY---QRGVPEHLVKSITWQTLQAVNFCH---KHNCIHRDVKPENILITKHSVIKLCDFGFARLLTG 154 (311)
T ss_dssp EECCSEEHHHHHHHT---SSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECC-
T ss_pred EEeCCCchHHHHHhh---hcCCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccC
Confidence 999999999988863 345899999999999999999999 89999999999999999999999999999987765
Q ss_pred CCCCceeccccccccccccccc-CCCCccchHHHHHHHHHHHHhCCCCCCccccccccc---------------------
Q 004268 666 DSSNRTLVVGTYGYIAPELAYT-MAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSSSS--------------------- 723 (764)
Q Consensus 666 ~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~~~--------------------- 723 (764)
.........|++.|+|||++.+ ..++.++||||+|+++|+|++|+.||.+....+...
T Consensus 155 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (311)
T 4agu_A 155 PSDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQ 234 (311)
T ss_dssp -----------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCG
T ss_pred cccccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhccccccccccccccc
Confidence 4444455678999999999876 568999999999999999999999998765321100
Q ss_pred ---CCcC----------CCCCCCcHHHHHHHhhhhccc
Q 004268 724 ---GRKI----------SQNPRLDLQCNAYLKNFSQGN 748 (764)
Q Consensus 724 ---~~~~----------~~~~~~~~~~~~~~~~~l~~~ 748 (764)
.... ...+.++..+.+++++|++.+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d 272 (311)
T 4agu_A 235 YFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMD 272 (311)
T ss_dssp GGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSS
T ss_pred ccccCcCCCccccchhhhhcccccHHHHHHHHHHccCC
Confidence 0000 012467888999999999987
No 118
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=6.4e-37 Score=314.07 Aligned_cols=232 Identities=23% Similarity=0.374 Sum_probs=196.1
Q ss_pred HhhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEEEE
Q 004268 506 ATEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFL 584 (764)
Q Consensus 506 ~~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 584 (764)
..++|++.+.||+|+||+||+|.+. ++..||+|++....... .+.+.+|++++++++||||+++++++.+.+..++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~---~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (277)
T 3f3z_A 7 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVED---VDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYL 83 (277)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSC---HHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred hhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccch---HHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEE
Confidence 4678999999999999999999865 67899999987654443 3678899999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeee---cCCCCEEEeeecccc
Q 004268 585 IYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILL---NSNLEAFVADFGLAR 661 (764)
Q Consensus 585 v~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll---~~~~~~kl~Dfg~~~ 661 (764)
||||+++++|.+++.. ...+++..+..++.|++.||+||| ++||+||||||+||++ +.++.+||+|||.+.
T Consensus 84 v~e~~~~~~L~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~ 157 (277)
T 3f3z_A 84 VMELCTGGELFERVVH---KRVFRESDAARIMKDVLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAA 157 (277)
T ss_dssp EEECCCSCBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSTTCCEEECCCTTCE
T ss_pred EEeccCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHEEEecCCCCCcEEEEecccce
Confidence 9999999999998873 345899999999999999999999 8999999999999999 788999999999998
Q ss_pred ccCCCCCCceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccccccccC---CcCCC----CCCCc
Q 004268 662 LLHPDSSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSSSSG---RKISQ----NPRLD 734 (764)
Q Consensus 662 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~~~~---~~~~~----~~~~~ 734 (764)
...... ......|++.|+|||++.+. ++.++||||+|+++|+|++|+.||........... ..... ...++
T Consensus 158 ~~~~~~-~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (277)
T 3f3z_A 158 RFKPGK-MMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTFTFPEKDWLNVS 235 (277)
T ss_dssp ECCTTS-CBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCHHHHTTSC
T ss_pred eccCcc-chhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCchhhhcCC
Confidence 765433 33445789999999998765 89999999999999999999999987654322111 11111 12578
Q ss_pred HHHHHHHhhhhccc
Q 004268 735 LQCNAYLKNFSQGN 748 (764)
Q Consensus 735 ~~~~~~~~~~l~~~ 748 (764)
..+.+++++|++.+
T Consensus 236 ~~~~~li~~~l~~d 249 (277)
T 3f3z_A 236 PQAESLIRRLLTKS 249 (277)
T ss_dssp HHHHHHHHHHTCSS
T ss_pred HHHHHHHHHHccCC
Confidence 89999999999977
No 119
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=3.5e-36 Score=319.37 Aligned_cols=309 Identities=26% Similarity=0.377 Sum_probs=231.8
Q ss_pred cccccCCCeeEEEeCCCCccccCCccccCCCCCcEEEcCCCcCcccCCccccCCCCCCEEEccCCcCcccCCcccCCCCC
Q 004268 13 LNFTCFPNLVTFRIWGTLLSGRMPSEIGALSKLEKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTGTIPSEIGSLRD 92 (764)
Q Consensus 13 ~~~~~~~~l~~L~l~~~~~~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~ 92 (764)
..++.+++|+.|++++|.++. ++ .+..+++|++|++++|+++++.+ +..+++|++|+|++|.++.. ..|..+++
T Consensus 38 ~~~~~l~~L~~L~l~~~~i~~-~~-~~~~~~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i~~~--~~~~~l~~ 111 (347)
T 4fmz_A 38 VTQEELESITKLVVAGEKVAS-IQ-GIEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITDI--SALQNLTN 111 (347)
T ss_dssp ECHHHHTTCSEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTT
T ss_pred ccchhcccccEEEEeCCcccc-ch-hhhhcCCccEEEccCCccccchh--hhcCCcCCEEEccCCcccCc--hHHcCCCc
Confidence 456688999999999999975 44 48999999999999999996544 99999999999999999953 47999999
Q ss_pred CCEEecCCCcccccCCccCcCCCCCCEEEccCCcCcccCCccccCCCCcCEEecccCcccccCCccccCCCCCCeeeccc
Q 004268 93 LLDLNLSNNILNGSIPLEFGNLKDLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNLKSLFLDN 172 (764)
Q Consensus 93 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 172 (764)
|++|+|++|.++.+.+ +..+++|++|++++|...... ..+..+++|++|++++|.+..+.+ +..+++|++|++++
T Consensus 112 L~~L~l~~n~i~~~~~--~~~l~~L~~L~l~~n~~~~~~-~~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~ 186 (347)
T 4fmz_A 112 LRELYLNEDNISDISP--LANLTKMYSLNLGANHNLSDL-SPLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNY 186 (347)
T ss_dssp CSEEECTTSCCCCCGG--GTTCTTCCEEECTTCTTCCCC-GGGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTT
T ss_pred CCEEECcCCcccCchh--hccCCceeEEECCCCCCcccc-cchhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccC
Confidence 9999999999996544 889999999999999655443 448999999999999999986644 88999999999999
Q ss_pred CCCCCCCCCccccCCCccEEEecCccCcCCcccccCCccccceeeccCcccccccCccccCCCCCCEEEccCCcccCCCC
Q 004268 173 NHLSGPIPSTLYHLNQLATLCLGYNKLVGPVTKEVGNMKNLDRLHLNGNNLTGSIPSTIGYLNLLDELHLSHNRLDGPIP 252 (764)
Q Consensus 173 n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 252 (764)
|.++++.+ +..+++|+.|++++|.+..... +..+++|++|++++|.+++..+ +..+++|++|++++|.+++.
T Consensus 187 n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-- 258 (347)
T 4fmz_A 187 NQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI-- 258 (347)
T ss_dssp SCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--
T ss_pred Cccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC--
Confidence 99986544 8899999999999999986654 6677778888887777775433 55566666666666665532
Q ss_pred cCCcCCCCCCeEEccCCcccCCCCccccCCCCCCeEeccCccccCCCCCCCCCCCccceEEccCCcCccCCChhhhcccc
Q 004268 253 PTIGNLTNLIALDLSSNQLSGLLPREVGNLKYLASLSLNGNILIGPIPPTIGYLTNLTYLNLGYNRLSSSIPPELMNCSQ 332 (764)
Q Consensus 253 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~ 332 (764)
..+..+++|+.|++++|.+++ . ..+..+++|++|++++|++++..+..+..+++
T Consensus 259 ~~~~~l~~L~~L~l~~n~l~~------------------------~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~ 312 (347)
T 4fmz_A 259 NAVKDLTKLKMLNVGSNQISD------------------------I--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTN 312 (347)
T ss_dssp GGGTTCTTCCEEECCSSCCCC------------------------C--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTT
T ss_pred hhHhcCCCcCEEEccCCccCC------------------------C--hhhcCCCCCCEEECcCCcCCCcChhHhhcccc
Confidence 234455555555555555543 2 23445556666666666666555555666666
Q ss_pred cceeeccccccccCCchhcccccccceeeccccccc
Q 004268 333 LLNLVLSHNSLSGSIPSEIGNLIFFRQLDLSRNFIN 368 (764)
Q Consensus 333 L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 368 (764)
|++|++++|++++..| +..+++|+.|++++|+|+
T Consensus 313 L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 313 LTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp CSEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred CCEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 6666666666664444 556666666666666654
No 120
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=4.7e-37 Score=321.83 Aligned_cols=204 Identities=26% Similarity=0.407 Sum_probs=177.7
Q ss_pred hhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCC--EEE
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNK--CMF 583 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~--~~~ 583 (764)
.++|++.+.||+|+||+||+|.+. +++.||+|++........ .+.+.+|++++++++||||+++++++.... ..+
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~--~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 85 (319)
T 4euu_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRP--VDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKV 85 (319)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSC--HHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEE
T ss_pred CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccch--HHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEE
Confidence 478999999999999999999865 699999999976443332 367789999999999999999999988765 789
Q ss_pred EEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeee----cCCCCEEEeeecc
Q 004268 584 LIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILL----NSNLEAFVADFGL 659 (764)
Q Consensus 584 lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll----~~~~~~kl~Dfg~ 659 (764)
+||||+++++|.+++........+++..+..++.|++.||+||| ++||+||||||+||++ +.++.+||+|||.
T Consensus 86 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~ 162 (319)
T 4euu_A 86 LIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGA 162 (319)
T ss_dssp EEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEECTTSCEEEEECCCTT
T ss_pred EEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEEeccCCCCceEEEccCCC
Confidence 99999999999999986544455999999999999999999999 8999999999999999 7788899999999
Q ss_pred ccccCCCCCCceecccccccccccccc--------cCCCCccchHHHHHHHHHHHHhCCCCCCcc
Q 004268 660 ARLLHPDSSNRTLVVGTYGYIAPELAY--------TMAVTEKCDVYSFGVVALEVLMGSHPTDLL 716 (764)
Q Consensus 660 ~~~~~~~~~~~~~~~g~~~y~aPE~~~--------~~~~~~~~DiwslG~il~~lltg~~Pf~~~ 716 (764)
++....... .....||+.|+|||++. +..++.++||||+||++|+|++|+.||...
T Consensus 163 a~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 226 (319)
T 4euu_A 163 ARELEDDEQ-FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPF 226 (319)
T ss_dssp CEECCTTCC-BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECT
T ss_pred ceecCCCCc-eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 987654332 33457899999999886 567899999999999999999999999743
No 121
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=1e-37 Score=327.14 Aligned_cols=243 Identities=35% Similarity=0.513 Sum_probs=198.9
Q ss_pred HHHHHhhcCCcceeeeecCceeEEEEEECCCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCE
Q 004268 502 EMIEATEDFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKC 581 (764)
Q Consensus 502 ~~~~~~~~y~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~ 581 (764)
++....++|++.+.||+|+||+||+|.+++++.||+|++...... ..+.+.+|+++++.++||||+++++++.+.+.
T Consensus 33 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 109 (321)
T 2qkw_B 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQ---GIEEFETEIETLSFCRHPHLVSLIGFCDERNE 109 (321)
T ss_dssp CCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSS---HHHHHHHHHHGGGSCCCTTBCCEEEECCCTTC
T ss_pred HHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChH---HHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCe
Confidence 344467899999999999999999999888999999998765433 24778999999999999999999999999999
Q ss_pred EEEEEEecCCCCHHHHHhcCcc-ccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeeccc
Q 004268 582 MFLIYEYMERGSLFCVLRNDVE-AVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLA 660 (764)
Q Consensus 582 ~~lv~e~~~~~~L~~~l~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~ 660 (764)
.++||||+++++|.+++..... ...+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||.+
T Consensus 110 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~ 186 (321)
T 2qkw_B 110 MILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGIS 186 (321)
T ss_dssp CEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCSTTEEECTTCCEEECCCTTC
T ss_pred EEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhc---CCCeecCCCCHHHEEECCCCCEEEeecccc
Confidence 9999999999999999865322 235899999999999999999999 899999999999999999999999999999
Q ss_pred cccCCCC--CCceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCccccccccc--------------C
Q 004268 661 RLLHPDS--SNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSSSS--------------G 724 (764)
Q Consensus 661 ~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~~~--------------~ 724 (764)
....... .......|++.|+|||++.+..++.++||||+|+++|+|++|+.||.......... .
T Consensus 187 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (321)
T 2qkw_B 187 KKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLE 266 (321)
T ss_dssp EECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCC
T ss_pred cccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHH
Confidence 8654322 22234568999999999999999999999999999999999999997654322110 0
Q ss_pred C--cC----CCCCCCcHHHHHHHhhhhccchh
Q 004268 725 R--KI----SQNPRLDLQCNAYLKNFSQGNHR 750 (764)
Q Consensus 725 ~--~~----~~~~~~~~~~~~~~~~~l~~~~~ 750 (764)
. .. ...+..+..+.+++.+|++.++.
T Consensus 267 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~ 298 (321)
T 2qkw_B 267 QIVDPNLADKIRPESLRKFGDTAVKCLALSSE 298 (321)
T ss_dssp SSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGG
T ss_pred HhcChhhccccCHHHHHHHHHHHHHHcCCCcc
Confidence 0 00 11122345677888899887743
No 122
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=1.9e-36 Score=344.59 Aligned_cols=311 Identities=21% Similarity=0.178 Sum_probs=252.6
Q ss_pred CCCeeEEEeCCCCccccCCccccCCCCCcEEEcCCCcCcccCCccccCCCCCCEEEccCCcCcccCCcccCCCCCCCEEe
Q 004268 18 FPNLVTFRIWGTLLSGRMPSEIGALSKLEKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLDLN 97 (764)
Q Consensus 18 ~~~l~~L~l~~~~~~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~ 97 (764)
+++++.|++.+|.+....+..+..+++|++|+|++|.++++.+..|..+++|++|+|++|.|++..+..|+.+++|++|+
T Consensus 50 l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 129 (597)
T 3oja_B 50 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 129 (597)
T ss_dssp GCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEE
Confidence 46889999999999987777889999999999999999999999999999999999999999988888999999999999
Q ss_pred cCCCcccccCCccCcCCCCCCEEEccCCcCcccCCccccCCCCcCEEecccCcccccCCccccCCCCCCeeecccCCCCC
Q 004268 98 LSNNILNGSIPLEFGNLKDLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNLKSLFLDNNHLSG 177 (764)
Q Consensus 98 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~ 177 (764)
|++|.++.+.+..|.++++|++|+|++|.+++++|..|.++++|++|+|++|.++++. +..+++|+.|++++|.+++
T Consensus 130 L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~---~~~l~~L~~L~l~~n~l~~ 206 (597)
T 3oja_B 130 LERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLST 206 (597)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC---GGGCTTCSEEECCSSCCSE
T ss_pred eeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC---hhhhhhhhhhhcccCcccc
Confidence 9999999888888999999999999999999999999999999999999999998763 5667899999999998863
Q ss_pred CCCCccccCCCccEEEecCccCcCCcccccCCccccceeeccCcccccccCccccCCCCCCEEEccCCcccCCCCcCCcC
Q 004268 178 PIPSTLYHLNQLATLCLGYNKLVGPVTKEVGNMKNLDRLHLNGNNLTGSIPSTIGYLNLLDELHLSHNRLDGPIPPTIGN 257 (764)
Q Consensus 178 ~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 257 (764)
+....+|+.|++++|.+..+... . .++|+.|+|++|.+++. ..+..
T Consensus 207 -----l~~~~~L~~L~ls~n~l~~~~~~------------------------~---~~~L~~L~L~~n~l~~~--~~l~~ 252 (597)
T 3oja_B 207 -----LAIPIAVEELDASHNSINVVRGP------------------------V---NVELTILKLQHNNLTDT--AWLLN 252 (597)
T ss_dssp -----EECCTTCSEEECCSSCCCEEECS------------------------C---CSCCCEEECCSSCCCCC--GGGGG
T ss_pred -----ccCCchhheeeccCCcccccccc------------------------c---CCCCCEEECCCCCCCCC--hhhcc
Confidence 23444566666666655432211 1 13566666666666642 45666
Q ss_pred CCCCCeEEccCCcccCCCCccccCCCCCCeEeccCccccCCCCCCCCCCCccceEEccCCcCccCCChhhhcccccceee
Q 004268 258 LTNLIALDLSSNQLSGLLPREVGNLKYLASLSLNGNILIGPIPPTIGYLTNLTYLNLGYNRLSSSIPPELMNCSQLLNLV 337 (764)
Q Consensus 258 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ 337 (764)
+++|+.|+|++|.+.+..|..|..+++|+.|+|++|.+.+ +|..+..+++|+.|+|++|.++ .+|..+..+++|+.|+
T Consensus 253 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~ 330 (597)
T 3oja_B 253 YPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLY 330 (597)
T ss_dssp CTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEE
T ss_pred CCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEE
Confidence 7777777777777776667777777777777777777765 3455666788888888888888 5677788888888888
Q ss_pred ccccccccCCchhcccccccceeecccccccCC
Q 004268 338 LSHNSLSGSIPSEIGNLIFFRQLDLSRNFINGT 370 (764)
Q Consensus 338 ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 370 (764)
|++|++++.. +..+++|+.|+|++|++.+.
T Consensus 331 L~~N~l~~~~---~~~~~~L~~L~l~~N~~~~~ 360 (597)
T 3oja_B 331 LDHNSIVTLK---LSTHHTLKNLTLSHNDWDCN 360 (597)
T ss_dssp CCSSCCCCCC---CCTTCCCSEEECCSSCEEHH
T ss_pred CCCCCCCCcC---hhhcCCCCEEEeeCCCCCCh
Confidence 8888887542 56777888888888888653
No 123
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=8.3e-37 Score=318.36 Aligned_cols=246 Identities=20% Similarity=0.221 Sum_probs=192.6
Q ss_pred hhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhc-CCCceeeEeeEEeeCCEEEE
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQI-RHRNIVKLYGFCLHNKCMFL 584 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~l 584 (764)
.++|++.+.||+|+||+||+|++. +|+.||||++......... ......|+..+.++ +||||+++++++.+++..++
T Consensus 56 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~-~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~l 134 (311)
T 3p1a_A 56 QQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKD-RARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYL 134 (311)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHH-HHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred hhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHH-HHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEE
Confidence 478999999999999999999876 7999999998765544333 34445555555555 99999999999999999999
Q ss_pred EEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeeccccccC
Q 004268 585 IYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLARLLH 664 (764)
Q Consensus 585 v~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~ 664 (764)
||||+ +++|.+++... ...+++..++.++.|++.||+||| ++||+||||||+||+++.++.+||+|||++....
T Consensus 135 v~e~~-~~~L~~~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~ 208 (311)
T 3p1a_A 135 QTELC-GPSLQQHCEAW--GASLPEAQVWGYLRDTLLALAHLH---SQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELG 208 (311)
T ss_dssp EEECC-CCBHHHHHHHH--CSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECGGGCEEECCCTTCEECC
T ss_pred EEecc-CCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEECCCCCEEEccceeeeecc
Confidence 99999 56888888643 345899999999999999999999 8899999999999999999999999999998765
Q ss_pred CCCCCceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccccccccCCc--CCCCCCCcHHHHHHHh
Q 004268 665 PDSSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSSSSGRK--ISQNPRLDLQCNAYLK 742 (764)
Q Consensus 665 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 742 (764)
... ......||+.|+|||++.+ .++.++||||+||++|||++|..||............. ....+.++..+.++++
T Consensus 209 ~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 286 (311)
T 3p1a_A 209 TAG-AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQGYLPPEFTAGLSSELRSVLV 286 (311)
T ss_dssp -------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHHHHHHTTTCCCHHHHTTSCHHHHHHHH
T ss_pred cCC-CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHhccCCCcccccCCCHHHHHHHH
Confidence 332 2334568999999999876 78999999999999999999977665444322221111 1123457889999999
Q ss_pred hhhccchhhH--HHhhhcCCC
Q 004268 743 NFSQGNHRWE--NLLFKKFPY 761 (764)
Q Consensus 743 ~~l~~~~~~~--~~~~~~~p~ 761 (764)
.|++.++.-| .....+.||
T Consensus 287 ~~L~~dP~~Rpt~~ell~hp~ 307 (311)
T 3p1a_A 287 MMLEPDPKLRATAEALLALPV 307 (311)
T ss_dssp HHSCSSTTTSCCHHHHHTSGG
T ss_pred HHcCCChhhCcCHHHHHhCcc
Confidence 9999873333 344444444
No 124
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=5.6e-37 Score=321.46 Aligned_cols=236 Identities=21% Similarity=0.323 Sum_probs=198.5
Q ss_pred HhhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcH---HHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCE
Q 004268 506 ATEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEP---AFLESFQTEARLLSQIRHRNIVKLYGFCLHNKC 581 (764)
Q Consensus 506 ~~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~---~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~ 581 (764)
..++|++.+.||+|+||.||+|... +|+.||+|++........ ...+.+.+|+.++++++||||+++++++.+.+.
T Consensus 10 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 89 (321)
T 2a2a_A 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTD 89 (321)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred hhccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCE
Confidence 3578999999999999999999865 789999999876543321 123678899999999999999999999999999
Q ss_pred EEEEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCC----CEEEeee
Q 004268 582 MFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNL----EAFVADF 657 (764)
Q Consensus 582 ~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~----~~kl~Df 657 (764)
.++||||+++++|.+++.. ...+++..+..++.|++.||+||| ++||+||||||+||+++.++ .+||+||
T Consensus 90 ~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~lH---~~~ivH~dikp~NIl~~~~~~~~~~~kl~Df 163 (321)
T 2a2a_A 90 VVLILELVSGGELFDFLAQ---KESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDF 163 (321)
T ss_dssp EEEEECCCCSCBHHHHHHT---CSCEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCTTSSSCCEEECCC
T ss_pred EEEEEEcCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCChHHEEEecCCCCcCCEEEccC
Confidence 9999999999999999974 346889999999999999999999 88999999999999999887 7999999
Q ss_pred ccccccCCCCCCceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccccccccC---CcCC----CC
Q 004268 658 GLARLLHPDSSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSSSSG---RKIS----QN 730 (764)
Q Consensus 658 g~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~~~~---~~~~----~~ 730 (764)
|.+....... ......|++.|+|||++.+..++.++||||+|+++|+|++|+.||.+....+.... .... ..
T Consensus 164 g~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 242 (321)
T 2a2a_A 164 GLAHEIEDGV-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFF 242 (321)
T ss_dssp TTCEECCTTC-CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHHHH
T ss_pred ccceecCccc-cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccccChhhh
Confidence 9998765432 23345789999999999999999999999999999999999999986554222111 1111 12
Q ss_pred CCCcHHHHHHHhhhhccc
Q 004268 731 PRLDLQCNAYLKNFSQGN 748 (764)
Q Consensus 731 ~~~~~~~~~~~~~~l~~~ 748 (764)
+..+..+.++++.|++.+
T Consensus 243 ~~~~~~~~~li~~~l~~d 260 (321)
T 2a2a_A 243 SHTSELAKDFIRKLLVKE 260 (321)
T ss_dssp TTCCHHHHHHHHTTSCSS
T ss_pred cccCHHHHHHHHHHcCCC
Confidence 456788999999999987
No 125
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=1.3e-36 Score=313.02 Aligned_cols=235 Identities=21% Similarity=0.336 Sum_probs=198.6
Q ss_pred HhhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEEEE
Q 004268 506 ATEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFL 584 (764)
Q Consensus 506 ~~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 584 (764)
..++|++.+.||+|+||+||+|.+. +++.||+|++...... ....+.+.+|++++++++||||+++++++.+.+..++
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 82 (284)
T 3kk8_A 4 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLS-ARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYL 82 (284)
T ss_dssp TTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred hhhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCC-HHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEE
Confidence 3578999999999999999999865 6899999999765543 3345778899999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCC---EEEeeecccc
Q 004268 585 IYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLE---AFVADFGLAR 661 (764)
Q Consensus 585 v~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~---~kl~Dfg~~~ 661 (764)
||||+++++|.+.+.. ...+++..+..++.|++.||+||| ++||+||||||+||+++.++. +||+|||.+.
T Consensus 83 v~e~~~~~~l~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~ 156 (284)
T 3kk8_A 83 VFDLVTGGELFEDIVA---REFYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAI 156 (284)
T ss_dssp EECCCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESSSSTTCCEEECCCTTCE
T ss_pred EEecCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH---HCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeE
Confidence 9999999999988873 345899999999999999999999 899999999999999986655 9999999998
Q ss_pred ccCCCCCCceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccccccc-------cCCcCCCCCCCc
Q 004268 662 LLHPDSSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSSS-------SGRKISQNPRLD 734 (764)
Q Consensus 662 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~~-------~~~~~~~~~~~~ 734 (764)
...... ......|++.|+|||++.+..++.++||||+|+++|+|++|+.||.+....... ..........++
T Consensus 157 ~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (284)
T 3kk8_A 157 EVNDSE-AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVT 235 (284)
T ss_dssp ECCSSC-BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTTTTSC
T ss_pred EcccCc-cccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhccccCCchhhcccC
Confidence 765332 233467899999999999999999999999999999999999999766542211 111222234678
Q ss_pred HHHHHHHhhhhccc
Q 004268 735 LQCNAYLKNFSQGN 748 (764)
Q Consensus 735 ~~~~~~~~~~l~~~ 748 (764)
..+.+++++|++.+
T Consensus 236 ~~~~~li~~~l~~d 249 (284)
T 3kk8_A 236 PEAKSLIDSMLTVN 249 (284)
T ss_dssp HHHHHHHHHHSCSS
T ss_pred HHHHHHHHHHcccC
Confidence 89999999999877
No 126
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=4e-37 Score=316.78 Aligned_cols=234 Identities=28% Similarity=0.468 Sum_probs=198.7
Q ss_pred hhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEEEEE
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFLI 585 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 585 (764)
.++|++.+.||+|+||.||+|... +++.||+|++...........+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 92 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLM 92 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEE
Confidence 578999999999999999999865 6789999998654322222236788999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeeccccccCC
Q 004268 586 YEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLARLLHP 665 (764)
Q Consensus 586 ~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 665 (764)
|||+++++|.+++.. ...+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||.+.....
T Consensus 93 ~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~ 166 (284)
T 2vgo_A 93 LEFAPRGELYKELQK---HGRFDEQRSATFMEELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS 166 (284)
T ss_dssp ECCCTTEEHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECTTCCEEECCCTTCEECSS
T ss_pred EEeCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEEcCCCCEEEecccccccCcc
Confidence 999999999999974 345899999999999999999999 99999999999999999999999999999976543
Q ss_pred CCCCceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCccccccc---ccCCcCCCCCCCcHHHHHHHh
Q 004268 666 DSSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSS---SSGRKISQNPRLDLQCNAYLK 742 (764)
Q Consensus 666 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 742 (764)
. ......|++.|+|||++.+..++.++||||+|+++|+|++|+.||........ ........++.++..+.++++
T Consensus 167 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 244 (284)
T 2vgo_A 167 L--RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSKDLIS 244 (284)
T ss_dssp S--CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCTTSCHHHHHHHH
T ss_pred c--ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHHHhccccCCCCcCCHHHHHHHH
Confidence 2 23345789999999999999999999999999999999999999986654221 112233345667899999999
Q ss_pred hhhccc
Q 004268 743 NFSQGN 748 (764)
Q Consensus 743 ~~l~~~ 748 (764)
+|++.+
T Consensus 245 ~~l~~~ 250 (284)
T 2vgo_A 245 KLLRYH 250 (284)
T ss_dssp HHSCSS
T ss_pred HHhhcC
Confidence 999877
No 127
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.1e-36 Score=317.19 Aligned_cols=238 Identities=25% Similarity=0.375 Sum_probs=192.3
Q ss_pred HhhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEEEE
Q 004268 506 ATEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFL 584 (764)
Q Consensus 506 ~~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 584 (764)
..++|++.+.||+|+||.||+|... +++.||+|++...........+.+.+|+.++++++||||+++++++..++..++
T Consensus 32 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~l 111 (309)
T 2h34_A 32 QFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYV 111 (309)
T ss_dssp --CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEE
T ss_pred EeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEE
Confidence 4689999999999999999999865 788999999987666666667889999999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeeccccccC
Q 004268 585 IYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLARLLH 664 (764)
Q Consensus 585 v~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~ 664 (764)
||||+++++|.+++.. ...+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||.+....
T Consensus 112 v~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 185 (309)
T 2h34_A 112 DMRLINGVDLAAMLRR---QGPLAPPRAVAIVRQIGSALDAAH---AAGATHRDVKPENILVSADDFAYLVDFGIASATT 185 (309)
T ss_dssp EEECCCCEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSCCC-----
T ss_pred EEEecCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH---HCcCCcCCCChHHEEEcCCCCEEEecCccCcccc
Confidence 9999999999999974 346899999999999999999999 8899999999999999999999999999997664
Q ss_pred CCC-CCceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCccccccc------ccCCcCCCCCCCcHHH
Q 004268 665 PDS-SNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSS------SSGRKISQNPRLDLQC 737 (764)
Q Consensus 665 ~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~------~~~~~~~~~~~~~~~~ 737 (764)
... .......|++.|+|||++.+..++.++||||+|+++|+|++|+.||........ .........+.++..+
T Consensus 186 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 265 (309)
T 2h34_A 186 DEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVMGAHINQAIPRPSTVRPGIPVAF 265 (309)
T ss_dssp -----------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHHHHHHSCCCCGGGTSTTCCTHH
T ss_pred ccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHHHHHhccCCCCccccCCCCCHHH
Confidence 332 222345789999999999999999999999999999999999999987654211 1111223356688899
Q ss_pred HHHHhhhhccch
Q 004268 738 NAYLKNFSQGNH 749 (764)
Q Consensus 738 ~~~~~~~l~~~~ 749 (764)
.+++++|++.++
T Consensus 266 ~~li~~~l~~dP 277 (309)
T 2h34_A 266 DAVIARGMAKNP 277 (309)
T ss_dssp HHHHHHHTCSSG
T ss_pred HHHHHHhccCCH
Confidence 999999998773
No 128
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=1.1e-36 Score=321.72 Aligned_cols=232 Identities=26% Similarity=0.378 Sum_probs=196.2
Q ss_pred hhcCCcceeeeecCceeEEEEEE-CCCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEEEEE
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQL-SSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFLI 585 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 585 (764)
.++|++.+.||+|+||+||+|+. .+++.||+|++...........+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 132 (348)
T 1u5q_A 53 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV 132 (348)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEE
Confidence 46699999999999999999986 57899999999876655555667899999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeeccccccCC
Q 004268 586 YEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLARLLHP 665 (764)
Q Consensus 586 ~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 665 (764)
|||+. |++.+++.. ....+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||++.....
T Consensus 133 ~e~~~-g~l~~~l~~--~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~ 206 (348)
T 1u5q_A 133 MEYCL-GSASDLLEV--HKKPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP 206 (348)
T ss_dssp EECCS-EEHHHHHHH--HTSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS
T ss_pred EecCC-CCHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEeeccCceecCC
Confidence 99998 578777753 2346899999999999999999999 88999999999999999999999999999986643
Q ss_pred CCCCceecccccccccccccc---cCCCCccchHHHHHHHHHHHHhCCCCCCccccccccc-----CCcCCCCCCCcHHH
Q 004268 666 DSSNRTLVVGTYGYIAPELAY---TMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSSSS-----GRKISQNPRLDLQC 737 (764)
Q Consensus 666 ~~~~~~~~~g~~~y~aPE~~~---~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~~~-----~~~~~~~~~~~~~~ 737 (764)
. ....||+.|+|||++. +..++.++||||+||++|+|++|+.||.......... ..........+..+
T Consensus 207 ~----~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 282 (348)
T 1u5q_A 207 A----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYF 282 (348)
T ss_dssp B----CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCCCTTSCHHH
T ss_pred C----CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHH
Confidence 2 2357899999999984 5678999999999999999999999998665422111 11112234568899
Q ss_pred HHHHhhhhccc
Q 004268 738 NAYLKNFSQGN 748 (764)
Q Consensus 738 ~~~~~~~l~~~ 748 (764)
.++++.|++.+
T Consensus 283 ~~li~~~l~~d 293 (348)
T 1u5q_A 283 RNFVDSCLQKI 293 (348)
T ss_dssp HHHHHHHTCSS
T ss_pred HHHHHHHcccC
Confidence 99999999987
No 129
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=1.9e-36 Score=326.19 Aligned_cols=229 Identities=24% Similarity=0.386 Sum_probs=183.0
Q ss_pred hhcCCcc-eeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHh-cCCCceeeEeeEEee----C
Q 004268 507 TEDFHIK-YCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQ-IRHRNIVKLYGFCLH----N 579 (764)
Q Consensus 507 ~~~y~~~-~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~-l~hpniv~~~~~~~~----~ 579 (764)
.++|.+. +.||+|+||+||+|.+. +++.||+|++... ..+.+|++++.+ .+||||+++++++.. .
T Consensus 60 ~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~--------~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~ 131 (400)
T 1nxk_A 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC--------PKARREVELHWRASQCPHIVRIVDVYENLYAGR 131 (400)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS--------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTE
T ss_pred cccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc--------hhHHHHHHHHHHhcCCCCcceEeEEEeecccCC
Confidence 5678776 68999999999999865 7899999998632 456688888755 489999999999876 5
Q ss_pred CEEEEEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecC---CCCEEEee
Q 004268 580 KCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNS---NLEAFVAD 656 (764)
Q Consensus 580 ~~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~---~~~~kl~D 656 (764)
...|+||||+++|+|.+++... ....+++..++.++.||+.||+||| ++||+||||||+||+++. ++.+||+|
T Consensus 132 ~~~~lv~E~~~gg~L~~~l~~~-~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~~~~kl~D 207 (400)
T 1nxk_A 132 KCLLIVMECLDGGELFSRIQDR-GDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTD 207 (400)
T ss_dssp EEEEEEEECCCSEEHHHHHHCC----CCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSTTCCEEECC
T ss_pred cEEEEEEEeCCCCcHHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCcCcceEEEecCCCCccEEEEe
Confidence 6799999999999999999753 2345899999999999999999999 889999999999999997 78999999
Q ss_pred eccccccCCCCCCceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCccccccccc--------C---C
Q 004268 657 FGLARLLHPDSSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSSSS--------G---R 725 (764)
Q Consensus 657 fg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~~~--------~---~ 725 (764)
||+++..... ......+||+.|+|||++.+..++.++||||+||++|+|++|+.||.+........ . .
T Consensus 208 FG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~ 286 (400)
T 1nxk_A 208 FGFAKETTSH-NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEF 286 (400)
T ss_dssp CTTCEECC------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCC
T ss_pred cccccccCCC-CccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCcccC
Confidence 9999876432 22345678999999999999999999999999999999999999998665432110 0 1
Q ss_pred cCCCCCCCcHHHHHHHhhhhccc
Q 004268 726 KISQNPRLDLQCNAYLKNFSQGN 748 (764)
Q Consensus 726 ~~~~~~~~~~~~~~~~~~~l~~~ 748 (764)
.......++..+.++++.|++.+
T Consensus 287 ~~~~~~~~s~~~~~li~~~L~~d 309 (400)
T 1nxk_A 287 PNPEWSEVSEEVKMLIRNLLKTE 309 (400)
T ss_dssp CTTTTTTSCHHHHHHHHTTSCSS
T ss_pred CCcccccCCHHHHHHHHHHCCCC
Confidence 11122457889999999999987
No 130
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=2.8e-37 Score=324.74 Aligned_cols=206 Identities=25% Similarity=0.369 Sum_probs=168.2
Q ss_pred HHhhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEEE
Q 004268 505 EATEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCMF 583 (764)
Q Consensus 505 ~~~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 583 (764)
...++|++.+.||+|+||+||+|.+. +++.||+|++...... ....+.+.+|++++++++||||+++++++.+.+..+
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 109 (329)
T 3gbz_A 31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEE-EGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLH 109 (329)
T ss_dssp -CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC---------CHHHHHHGGGCCCTTBCCEEEEEEETTEEE
T ss_pred cchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccc-cccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEE
Confidence 45689999999999999999999754 7899999999765432 233466789999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeec-----CCCCEEEeeec
Q 004268 584 LIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLN-----SNLEAFVADFG 658 (764)
Q Consensus 584 lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~-----~~~~~kl~Dfg 658 (764)
+||||+++ +|.+++.. ...+++..++.++.||+.||+||| ++||+||||||+||+++ ..+.+||+|||
T Consensus 110 lv~e~~~~-~L~~~~~~---~~~~~~~~~~~i~~ql~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg 182 (329)
T 3gbz_A 110 LIFEYAEN-DLKKYMDK---NPDVSMRVIKSFLYQLINGVNFCH---SRRCLHRDLKPQNLLLSVSDASETPVLKIGDFG 182 (329)
T ss_dssp EEEECCSE-EHHHHHHH---CTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEC-----CCEEEECCTT
T ss_pred EEEecCCC-CHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHH---hCCEECCCCCHHHEEEecCCCCccceEEECcCC
Confidence 99999985 99999874 345899999999999999999999 89999999999999994 45569999999
Q ss_pred cccccCCCCCCceecccccccccccccccC-CCCccchHHHHHHHHHHHHhCCCCCCcccc
Q 004268 659 LARLLHPDSSNRTLVVGTYGYIAPELAYTM-AVTEKCDVYSFGVVALEVLMGSHPTDLLSS 718 (764)
Q Consensus 659 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~DiwslG~il~~lltg~~Pf~~~~~ 718 (764)
.+..............||+.|+|||++.+. .++.++||||+||++|+|++|+.||.+...
T Consensus 183 ~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~ 243 (329)
T 3gbz_A 183 LARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSE 243 (329)
T ss_dssp HHHHHC-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred CccccCCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCH
Confidence 998876554445556789999999998875 489999999999999999999999986553
No 131
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=1.4e-36 Score=319.02 Aligned_cols=247 Identities=20% Similarity=0.309 Sum_probs=202.2
Q ss_pred CccCHHHHHHHhhcCCcc-eeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhc-CCCceeeE
Q 004268 496 GRITFEEMIEATEDFHIK-YCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQI-RHRNIVKL 572 (764)
Q Consensus 496 ~~~~~~~~~~~~~~y~~~-~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~ 572 (764)
+.+.+.......++|.+. +.||+|+||+||+|... +++.||+|++........ ....+.+|+.+++.+ .||||+++
T Consensus 16 ~n~~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~-~~~~~~~e~~~l~~l~~~~~iv~~ 94 (327)
T 3lm5_A 16 ENLYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQD-CRAEILHEIAVLELAKSCPRVINL 94 (327)
T ss_dssp CCCCSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEE-CHHHHHHHHHHHHHTTTCTTBCCE
T ss_pred hhhHHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchH-HHHHHHHHHHHHHhccCCCCEEEE
Confidence 445555666778899998 88999999999999865 799999999876543322 236788999999999 56999999
Q ss_pred eeEEeeCCEEEEEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecC---C
Q 004268 573 YGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNS---N 649 (764)
Q Consensus 573 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~---~ 649 (764)
++++.+.+..++||||+++++|.+++... ....+++..++.++.|++.||+||| ++||+||||||+||+++. +
T Consensus 95 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~i~~ql~~~L~~LH---~~givH~Dikp~NIl~~~~~~~ 170 (327)
T 3lm5_A 95 HEVYENTSEIILILEYAAGGEIFSLCLPE-LAEMVSENDVIRLIKQILEGVYYLH---QNNIVHLDLKPQNILLSSIYPL 170 (327)
T ss_dssp EEEEECSSEEEEEEECCTTEEGGGGGSSC-C-CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESCBTTB
T ss_pred EEEEEeCCeEEEEEEecCCCcHHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCcCChHHEEEecCCCC
Confidence 99999999999999999999999998643 3456899999999999999999999 899999999999999997 7
Q ss_pred CCEEEeeeccccccCCCCCCceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCccccccc-------c
Q 004268 650 LEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSS-------S 722 (764)
Q Consensus 650 ~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~-------~ 722 (764)
+.+||+|||.+....... ......|++.|+|||++.+..++.++||||+|+++|+|++|+.||........ .
T Consensus 171 ~~~kL~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~ 249 (327)
T 3lm5_A 171 GDIKIVDFGMSRKIGHAC-ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVN 249 (327)
T ss_dssp CCEEECCGGGCEEC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC
T ss_pred CcEEEeeCccccccCCcc-ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHhcc
Confidence 899999999998765332 22345789999999999999999999999999999999999999987654221 1
Q ss_pred cCCcCCCCCCCcHHHHHHHhhhhccc
Q 004268 723 SGRKISQNPRLDLQCNAYLKNFSQGN 748 (764)
Q Consensus 723 ~~~~~~~~~~~~~~~~~~~~~~l~~~ 748 (764)
........+.++..+.++++.|++.+
T Consensus 250 ~~~~~~~~~~~~~~~~~li~~~L~~d 275 (327)
T 3lm5_A 250 VDYSEETFSSVSQLATDFIQSLLVKN 275 (327)
T ss_dssp CCCCTTTTTTSCHHHHHHHHHHSCSS
T ss_pred cccCchhhcccCHHHHHHHHHHcCCC
Confidence 11222334567889999999999987
No 132
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=6.8e-37 Score=314.92 Aligned_cols=237 Identities=24% Similarity=0.414 Sum_probs=197.3
Q ss_pred hhcCCcceeeeecCceeEEEEEECCCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEEEEEE
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFLIY 586 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 586 (764)
.++|++.+.||+|+||+||+|++.+++.||+|++....... +.+.+|++++++++||||+++++++.+.+..++||
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~----~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 98 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE----DEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIIT 98 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSBCH----HHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEE
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCCH----HHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEE
Confidence 57899999999999999999999888899999998665443 66889999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeeccccccCCC
Q 004268 587 EYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLARLLHPD 666 (764)
Q Consensus 587 e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 666 (764)
||+++++|.+++... ...+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||.+......
T Consensus 99 e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~ 173 (283)
T 3gen_A 99 EYMANGCLLNYLREM--RHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD 173 (283)
T ss_dssp CCCTTCBHHHHHHCG--GGCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCH
T ss_pred eccCCCcHHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCccceEEEcCCCCEEEcccccccccccc
Confidence 999999999999752 345899999999999999999999 899999999999999999999999999999866432
Q ss_pred CC-CceecccccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccccccc----cCCcCCCCCCCcHHHHHH
Q 004268 667 SS-NRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLM-GSHPTDLLSSLSSS----SGRKISQNPRLDLQCNAY 740 (764)
Q Consensus 667 ~~-~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~llt-g~~Pf~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 740 (764)
.. ......+++.|+|||++.+..++.++||||+|+++|+|++ |+.||......... .......+...+..+.++
T Consensus 174 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 253 (283)
T 3gen_A 174 EYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTI 253 (283)
T ss_dssp HHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHH
T ss_pred ccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHHHhcccCCCCCCcCCHHHHHH
Confidence 11 1122346778999999999999999999999999999998 99999876553221 122233344568899999
Q ss_pred HhhhhccchhhH
Q 004268 741 LKNFSQGNHRWE 752 (764)
Q Consensus 741 ~~~~l~~~~~~~ 752 (764)
++.|++.++.-|
T Consensus 254 i~~~l~~~p~~R 265 (283)
T 3gen_A 254 MYSCWHEKADER 265 (283)
T ss_dssp HHHTTCSSGGGS
T ss_pred HHHHccCChhHC
Confidence 999998874443
No 133
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=4.1e-37 Score=326.31 Aligned_cols=243 Identities=29% Similarity=0.412 Sum_probs=193.4
Q ss_pred HHHHhhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCC--CcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeC
Q 004268 503 MIEATEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSET--EEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHN 579 (764)
Q Consensus 503 ~~~~~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~ 579 (764)
+.+..++|++.+.||+|+||+||+|... +++.||+|++..... ......+.+.+|++++++++||||+++++++.+.
T Consensus 21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~ 100 (345)
T 3hko_A 21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDE 100 (345)
T ss_dssp HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccC
Confidence 3456899999999999999999999864 788999999865421 1122347889999999999999999999999999
Q ss_pred CEEEEEEEecCCCCHHHHHhcCc-------------------------------------cccccCHHHHHHHHHHHHHH
Q 004268 580 KCMFLIYEYMERGSLFCVLRNDV-------------------------------------EAVELDWTKRVNIVKSMAHA 622 (764)
Q Consensus 580 ~~~~lv~e~~~~~~L~~~l~~~~-------------------------------------~~~~l~~~~~~~i~~qi~~a 622 (764)
+..++||||+++|+|.+++.... ....+++..++.++.||+.|
T Consensus 101 ~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~ 180 (345)
T 3hko_A 101 QYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSA 180 (345)
T ss_dssp SEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHH
Confidence 99999999999999999985211 01224677888999999999
Q ss_pred HHHHHhcCCCCcEEcCCCCCCeeecCCC--CEEEeeeccccccCCCCC----Cceeccccccccccccccc--CCCCccc
Q 004268 623 LSYLHYDCKPSIVHRDISSNNILLNSNL--EAFVADFGLARLLHPDSS----NRTLVVGTYGYIAPELAYT--MAVTEKC 694 (764)
Q Consensus 623 L~~LH~~~~~~iiH~Dlkp~NIll~~~~--~~kl~Dfg~~~~~~~~~~----~~~~~~g~~~y~aPE~~~~--~~~~~~~ 694 (764)
|+||| ++||+||||||+||+++.++ .+||+|||.+........ ......||+.|+|||++.+ ..++.++
T Consensus 181 l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~ 257 (345)
T 3hko_A 181 LHYLH---NQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKC 257 (345)
T ss_dssp HHHHH---HTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHH
T ss_pred HHHHH---HCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHH
Confidence 99999 88999999999999998766 899999999986543221 2244678999999999875 6789999
Q ss_pred hHHHHHHHHHHHHhCCCCCCcccccccccC-------CcCCCCCCCcHHHHHHHhhhhccc
Q 004268 695 DVYSFGVVALEVLMGSHPTDLLSSLSSSSG-------RKISQNPRLDLQCNAYLKNFSQGN 748 (764)
Q Consensus 695 DiwslG~il~~lltg~~Pf~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~l~~~ 748 (764)
||||+|+++|+|++|+.||.+....+.... ........++..+.+++++|++.+
T Consensus 258 DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~ 318 (345)
T 3hko_A 258 DAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRN 318 (345)
T ss_dssp HHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSC
T ss_pred HHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHhcccccCCcccccCCHHHHHHHHHHcCCC
Confidence 999999999999999999987655322111 111122236889999999999987
No 134
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=7.7e-37 Score=325.95 Aligned_cols=228 Identities=22% Similarity=0.355 Sum_probs=187.5
Q ss_pred ceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEEEEEEEecCC
Q 004268 513 KYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFLIYEYMER 591 (764)
Q Consensus 513 ~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~ 591 (764)
.+.||+|+||.||+|... +|+.||+|++..... ...+.+.+|++++++++||||+++++++.+.+..++||||+++
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~ 170 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGM---KDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDG 170 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCSH---HHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEccccc---ccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCC
Confidence 568999999999999864 799999999876432 2347889999999999999999999999999999999999999
Q ss_pred CCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeee--cCCCCEEEeeeccccccCCCCCC
Q 004268 592 GSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILL--NSNLEAFVADFGLARLLHPDSSN 669 (764)
Q Consensus 592 ~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll--~~~~~~kl~Dfg~~~~~~~~~~~ 669 (764)
++|.+++.. ....+++..+..++.||+.||+||| ++||+||||||+||++ +.++.+||+|||+++...... .
T Consensus 171 ~~L~~~l~~--~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~-~ 244 (373)
T 2x4f_A 171 GELFDRIID--ESYNLTELDTILFMKQICEGIRHMH---QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE-K 244 (373)
T ss_dssp CEEHHHHHH--TGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC-B
T ss_pred CcHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcc-c
Confidence 999998864 2345889999999999999999999 8999999999999999 567899999999998765433 2
Q ss_pred ceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCccccccccc-------CCcCCCCCCCcHHHHHHHh
Q 004268 670 RTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSSSS-------GRKISQNPRLDLQCNAYLK 742 (764)
Q Consensus 670 ~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~ 742 (764)
.....||+.|+|||++.+..++.++||||+||++|+|++|+.||.+....+... .......+.++..+.++++
T Consensus 245 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~ 324 (373)
T 2x4f_A 245 LKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFIS 324 (373)
T ss_dssp CCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCSCSGGGTTSCHHHHHHHH
T ss_pred cccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCChhhhccCCHHHHHHHH
Confidence 334579999999999999999999999999999999999999998765432111 1111223567899999999
Q ss_pred hhhccch
Q 004268 743 NFSQGNH 749 (764)
Q Consensus 743 ~~l~~~~ 749 (764)
+|++.++
T Consensus 325 ~~L~~dp 331 (373)
T 2x4f_A 325 KLLIKEK 331 (373)
T ss_dssp TTSCSSG
T ss_pred HHcCCCh
Confidence 9999883
No 135
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=4.3e-37 Score=329.28 Aligned_cols=239 Identities=25% Similarity=0.401 Sum_probs=198.6
Q ss_pred hhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEEEEE
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFLI 585 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 585 (764)
.++|++.+.||+|+||+||+|.+. +++.||+|++.... .....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 190 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETL--PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIV 190 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTS--CHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccC--CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEE
Confidence 578999999999999999999876 78999999987543 233446788999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeeccccccCC
Q 004268 586 YEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLARLLHP 665 (764)
Q Consensus 586 ~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 665 (764)
|||+++|+|.++++. ....+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+++....
T Consensus 191 ~e~~~~g~L~~~l~~--~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~ 265 (377)
T 3cbl_A 191 MELVQGGDFLTFLRT--EGARLRVKTLLQMVGDAAAGMEYLE---SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEAD 265 (377)
T ss_dssp EECCTTCBHHHHHHH--HGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCGGGCEECTT
T ss_pred EEcCCCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHH---HCCcCCcccCHHHEEEcCCCcEEECcCCCceecCC
Confidence 999999999999974 2345889999999999999999999 89999999999999999999999999999986532
Q ss_pred CCCC--ceecccccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccccccc----cCCcCCCCCCCcHHHH
Q 004268 666 DSSN--RTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLM-GSHPTDLLSSLSSS----SGRKISQNPRLDLQCN 738 (764)
Q Consensus 666 ~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~llt-g~~Pf~~~~~~~~~----~~~~~~~~~~~~~~~~ 738 (764)
.... .....+++.|+|||++.+..++.++|||||||++|||++ |..||.+....... .......+...+..+.
T Consensus 266 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 345 (377)
T 3cbl_A 266 GVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRLPCPELCPDAVF 345 (377)
T ss_dssp SEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHHHTTCCCCCCTTCCHHHH
T ss_pred CceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHH
Confidence 2111 112235778999999998899999999999999999998 99999876643221 1223333455688899
Q ss_pred HHHhhhhccchhhH
Q 004268 739 AYLKNFSQGNHRWE 752 (764)
Q Consensus 739 ~~~~~~l~~~~~~~ 752 (764)
+++++||+.++.-|
T Consensus 346 ~li~~cl~~dP~~R 359 (377)
T 3cbl_A 346 RLMEQCWAYEPGQR 359 (377)
T ss_dssp HHHHHHTCSSGGGS
T ss_pred HHHHHHcCCCchhC
Confidence 99999998874433
No 136
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.3e-37 Score=326.55 Aligned_cols=233 Identities=25% Similarity=0.351 Sum_probs=184.7
Q ss_pred hcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEEEEEE
Q 004268 508 EDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFLIY 586 (764)
Q Consensus 508 ~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 586 (764)
++|++.+.||+|+||+||+|... +++.||+|++....... ....+.+|++++++++||||+++++++.+.+..++||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 79 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEG--APCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVF 79 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC--------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEE
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccc--cchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEe
Confidence 57999999999999999999865 78999999986544221 1124557999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeeccccccCCC
Q 004268 587 EYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLARLLHPD 666 (764)
Q Consensus 587 e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 666 (764)
||+++ +|.+++... ...+++..++.++.|++.||+||| ++||+||||||+||+++.++.+||+|||.+......
T Consensus 80 e~~~~-~l~~~~~~~--~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~ 153 (324)
T 3mtl_A 80 EYLDK-DLKQYLDDC--GNIINMHNVKLFLFQLLRGLAYCH---RQKVLHRDLKPQNLLINERGELKLADFGLARAKSIP 153 (324)
T ss_dssp ECCSE-EHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHH---HTTEEESSCCGGGEEECTTCCEEECSSSEEECC---
T ss_pred ccccc-CHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCcCHHHEEECCCCCEEEccCcccccccCC
Confidence 99985 888888743 345889999999999999999999 899999999999999999999999999999876544
Q ss_pred CCCceeccccccccccccccc-CCCCccchHHHHHHHHHHHHhCCCCCCccccccccc----------------------
Q 004268 667 SSNRTLVVGTYGYIAPELAYT-MAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSSSS---------------------- 723 (764)
Q Consensus 667 ~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~~~---------------------- 723 (764)
........||+.|+|||++.+ ..++.++||||+||++|+|++|+.||.+.+..+...
T Consensus 154 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 233 (324)
T 3mtl_A 154 TKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEE 233 (324)
T ss_dssp ---------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHH
T ss_pred ccccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchh
Confidence 444455678999999999876 568999999999999999999999998755321100
Q ss_pred -----------CCcCCCCCCCcHHHHHHHhhhhccc
Q 004268 724 -----------GRKISQNPRLDLQCNAYLKNFSQGN 748 (764)
Q Consensus 724 -----------~~~~~~~~~~~~~~~~~~~~~l~~~ 748 (764)
.......+.++..+.+++++|++.+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d 269 (324)
T 3mtl_A 234 FKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFE 269 (324)
T ss_dssp HHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSS
T ss_pred hcccccccccchhhhhhcCCCCHHHHHHHHHHcCcC
Confidence 0001123457888999999999987
No 137
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=7.1e-37 Score=329.44 Aligned_cols=205 Identities=29% Similarity=0.437 Sum_probs=166.4
Q ss_pred HHhhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcC-CCceeeEeeEEeeCC--
Q 004268 505 EATEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIR-HRNIVKLYGFCLHNK-- 580 (764)
Q Consensus 505 ~~~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~-- 580 (764)
...++|++.+.||+|+||+||+|.+. +|+.||+|++...... ....+.+.+|+.+++++. ||||+++++++...+
T Consensus 6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~-~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~ 84 (388)
T 3oz6_A 6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQN-STDAQRTFREIMILTELSGHENIVNLLNVLRADNDR 84 (388)
T ss_dssp HHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CC-HHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSS
T ss_pred cccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccC-hHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCC
Confidence 35689999999999999999999764 7999999998754333 344577889999999997 999999999997544
Q ss_pred EEEEEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeeccc
Q 004268 581 CMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLA 660 (764)
Q Consensus 581 ~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~ 660 (764)
..|+||||++ ++|..+++. ..+++..+..++.||+.||+||| ++||+||||||+||+++.++.+||+|||+|
T Consensus 85 ~~~lv~e~~~-~~L~~~~~~----~~~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a 156 (388)
T 3oz6_A 85 DVYLVFDYME-TDLHAVIRA----NILEPVHKQYVVYQLIKVIKYLH---SGGLLHRDMKPSNILLNAECHVKVADFGLS 156 (388)
T ss_dssp CEEEEEECCS-EEHHHHHHH----TCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEecccC-cCHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHeEEcCCCCEEecCCccc
Confidence 6899999998 589988864 35888999999999999999999 899999999999999999999999999999
Q ss_pred cccCCC---------------------CCCceeccccccccccccccc-CCCCccchHHHHHHHHHHHHhCCCCCCcccc
Q 004268 661 RLLHPD---------------------SSNRTLVVGTYGYIAPELAYT-MAVTEKCDVYSFGVVALEVLMGSHPTDLLSS 718 (764)
Q Consensus 661 ~~~~~~---------------------~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~~lltg~~Pf~~~~~ 718 (764)
+..... ....+..+||+.|+|||++.+ ..++.++||||+||++|||++|++||.+.+.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~ 236 (388)
T 3oz6_A 157 RSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSST 236 (388)
T ss_dssp EESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred ccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCH
Confidence 865321 111234579999999999887 6789999999999999999999999987654
No 138
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=6.2e-37 Score=326.89 Aligned_cols=237 Identities=29% Similarity=0.426 Sum_probs=187.0
Q ss_pred hhcCCcceeeeecCceeEEEEEEC----CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEE
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLS----SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCM 582 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 582 (764)
..+|++.+.||+|+||+||+|+.. ++..||+|++..... ....+.+.+|++++++++||||+++++++.+.+..
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 121 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT--EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPV 121 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCC--HHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccC--HHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCce
Confidence 468999999999999999999754 577899999976542 33457899999999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeeccccc
Q 004268 583 FLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLARL 662 (764)
Q Consensus 583 ~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~ 662 (764)
++||||+++++|.+++... ...+++..+..++.||+.||+||| ++||+||||||+||+++.++.+||+|||+++.
T Consensus 122 ~lv~e~~~~~sL~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 196 (373)
T 2qol_A 122 MIVTEYMENGSLDSFLRKH--DAQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLGRV 196 (373)
T ss_dssp EEEEECCTTCBHHHHHHTT--TTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC-----
T ss_pred EEEEeCCCCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCcceEEEcCCCCEEECcCccccc
Confidence 9999999999999999743 346899999999999999999999 88999999999999999999999999999987
Q ss_pred cCCCCCCc---eecccccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccccccc----cCCcCCCCCCCc
Q 004268 663 LHPDSSNR---TLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLM-GSHPTDLLSSLSSS----SGRKISQNPRLD 734 (764)
Q Consensus 663 ~~~~~~~~---~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~llt-g~~Pf~~~~~~~~~----~~~~~~~~~~~~ 734 (764)
........ ....+++.|+|||++.+..++.++||||||+++|||++ |+.||......+.. ...........+
T Consensus 197 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~ 276 (373)
T 2qol_A 197 LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCP 276 (373)
T ss_dssp -----------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHHHTTEECCCCTTCB
T ss_pred cccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCcccc
Confidence 65332211 12234678999999999999999999999999999998 99999866543221 112233445678
Q ss_pred HHHHHHHhhhhccchh
Q 004268 735 LQCNAYLKNFSQGNHR 750 (764)
Q Consensus 735 ~~~~~~~~~~l~~~~~ 750 (764)
..+.+++.+|++.++.
T Consensus 277 ~~l~~li~~cl~~dp~ 292 (373)
T 2qol_A 277 AALYQLMLDCWQKDRN 292 (373)
T ss_dssp HHHHHHHHHHTCSSGG
T ss_pred HHHHHHHHHHhCcChh
Confidence 8999999999998733
No 139
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=5.7e-37 Score=340.20 Aligned_cols=235 Identities=26% Similarity=0.422 Sum_probs=199.6
Q ss_pred HhhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEEEE
Q 004268 506 ATEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFL 584 (764)
Q Consensus 506 ~~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 584 (764)
..++|++.+.||+|+||+||+|... +|+.||+|++...........+.+.+|++++++++||||+++++++.+.+..++
T Consensus 24 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 103 (484)
T 3nyv_A 24 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYL 103 (484)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 4578999999999999999999865 899999999976554333334788999999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeee---cCCCCEEEeeecccc
Q 004268 585 IYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILL---NSNLEAFVADFGLAR 661 (764)
Q Consensus 585 v~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll---~~~~~~kl~Dfg~~~ 661 (764)
||||+.+++|.+++.. ...+++..++.++.||+.||+||| ++||+||||||+||++ +.++.+||+|||++.
T Consensus 104 v~e~~~~~~L~~~~~~---~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 177 (484)
T 3nyv_A 104 VGEVYTGGELFDEIIS---RKRFSEVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLST 177 (484)
T ss_dssp EECCCCSCBHHHHHHT---CSCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHH
T ss_pred EEecCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeE
Confidence 9999999999999873 346899999999999999999999 8999999999999999 467899999999998
Q ss_pred ccCCCCCCceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccccccccC-------CcCCCCCCCc
Q 004268 662 LLHPDSSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSSSSG-------RKISQNPRLD 734 (764)
Q Consensus 662 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~~~~-------~~~~~~~~~~ 734 (764)
...... ......||+.|+|||++.+ .++.++||||+||++|+|++|++||.+....+.... ........++
T Consensus 178 ~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s 255 (484)
T 3nyv_A 178 HFEASK-KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVS 255 (484)
T ss_dssp HBCCCC-SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGGGGSC
T ss_pred Eccccc-ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCCcccccCC
Confidence 775433 3344679999999999876 689999999999999999999999987665322111 1122234578
Q ss_pred HHHHHHHhhhhccc
Q 004268 735 LQCNAYLKNFSQGN 748 (764)
Q Consensus 735 ~~~~~~~~~~l~~~ 748 (764)
..+.+++++|++.+
T Consensus 256 ~~~~~li~~~L~~d 269 (484)
T 3nyv_A 256 ESAKDLIRKMLTYV 269 (484)
T ss_dssp HHHHHHHHHHTCSS
T ss_pred HHHHHHHHHHCCCC
Confidence 89999999999987
No 140
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=2.7e-36 Score=309.29 Aligned_cols=237 Identities=27% Similarity=0.396 Sum_probs=198.0
Q ss_pred HhhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEEEE
Q 004268 506 ATEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFL 584 (764)
Q Consensus 506 ~~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 584 (764)
..++|++.+.||+|+||.||+|... +++.||+|++....... ..+.+.+|+.+++.++||||+++++++.+.+..++
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 82 (276)
T 2yex_A 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD--CPENIKKEICINKMLNHENVVKFYGHRREGNIQYL 82 (276)
T ss_dssp HHHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTT--HHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred eecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchh--hhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEE
Confidence 4688999999999999999999865 78999999987554332 24788899999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeeccccccC
Q 004268 585 IYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLARLLH 664 (764)
Q Consensus 585 v~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~ 664 (764)
||||+++++|.+++.. ...+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||.+....
T Consensus 83 v~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~ 156 (276)
T 2yex_A 83 FLEYCSGGELFDRIEP---DIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFR 156 (276)
T ss_dssp EEECCTTEEGGGGSBT---TTBCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECE
T ss_pred EEEecCCCcHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCChHHEEEccCCCEEEeeCCCccccC
Confidence 9999999999998863 346899999999999999999999 8999999999999999999999999999997653
Q ss_pred CCC--CCceecccccccccccccccCCC-CccchHHHHHHHHHHHHhCCCCCCcccccccc------cCCcCCCCCCCcH
Q 004268 665 PDS--SNRTLVVGTYGYIAPELAYTMAV-TEKCDVYSFGVVALEVLMGSHPTDLLSSLSSS------SGRKISQNPRLDL 735 (764)
Q Consensus 665 ~~~--~~~~~~~g~~~y~aPE~~~~~~~-~~~~DiwslG~il~~lltg~~Pf~~~~~~~~~------~~~~~~~~~~~~~ 735 (764)
... .......|++.|+|||++.+..+ +.++||||+|+++|+|++|+.||......... ..........++.
T Consensus 157 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (276)
T 2yex_A 157 YNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDS 236 (276)
T ss_dssp ETTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCTTSTTGGGSCH
T ss_pred CCcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhcccccCchhhcCH
Confidence 221 12234578999999999988775 77899999999999999999999875542111 1111222345788
Q ss_pred HHHHHHhhhhccchh
Q 004268 736 QCNAYLKNFSQGNHR 750 (764)
Q Consensus 736 ~~~~~~~~~l~~~~~ 750 (764)
.+.++++.|++.++.
T Consensus 237 ~~~~li~~~l~~~p~ 251 (276)
T 2yex_A 237 APLALLHKILVENPS 251 (276)
T ss_dssp HHHHHHHHHSCSSTT
T ss_pred HHHHHHHHHCCCCch
Confidence 999999999998733
No 141
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.5e-37 Score=325.16 Aligned_cols=241 Identities=27% Similarity=0.401 Sum_probs=196.9
Q ss_pred HhhcCCcceeeeecCceeEEEEEE------CCCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhc-CCCceeeEeeEEee
Q 004268 506 ATEDFHIKYCIGTGGYGSVYRAQL------SSGKLVALKKLHRSETEEPAFLESFQTEARLLSQI-RHRNIVKLYGFCLH 578 (764)
Q Consensus 506 ~~~~y~~~~~ig~G~~g~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~ 578 (764)
..++|++.+.||+|+||+||+|.+ .+++.||+|++...... ...+.+.+|+++++++ +||||+++++++..
T Consensus 43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 120 (344)
T 1rjb_A 43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADS--SEREALMSELKMMTQLGSHENIVNLLGACTL 120 (344)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC--------CHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCH--HHHHHHHHHHHHHHhhcCCCCeeeEEEEEee
Confidence 457899999999999999999985 24568999999754322 2347889999999999 89999999999999
Q ss_pred CCEEEEEEEecCCCCHHHHHhcCccc--------------------cccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcC
Q 004268 579 NKCMFLIYEYMERGSLFCVLRNDVEA--------------------VELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRD 638 (764)
Q Consensus 579 ~~~~~lv~e~~~~~~L~~~l~~~~~~--------------------~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~D 638 (764)
.+..++||||+++|+|.+++...... ..+++..+..++.||+.||+||| ++||+|||
T Consensus 121 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~D 197 (344)
T 1rjb_A 121 SGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE---FKSCVHRD 197 (344)
T ss_dssp SSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHH---HTTEEETT
T ss_pred CCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCcccCC
Confidence 99999999999999999999754221 23789999999999999999999 89999999
Q ss_pred CCCCCeeecCCCCEEEeeeccccccCCCCCC--ceecccccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCc
Q 004268 639 ISSNNILLNSNLEAFVADFGLARLLHPDSSN--RTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLM-GSHPTDL 715 (764)
Q Consensus 639 lkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~llt-g~~Pf~~ 715 (764)
|||+||+++.++.+||+|||.+......... .....+++.|+|||++.+..++.++||||+|+++|+|+| |..||.+
T Consensus 198 ikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~ 277 (344)
T 1rjb_A 198 LAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPG 277 (344)
T ss_dssp CSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTT
T ss_pred CChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCccc
Confidence 9999999999999999999999876543322 223457889999999999999999999999999999998 9999987
Q ss_pred cccccc-----ccCCcCCCCCCCcHHHHHHHhhhhccchhh
Q 004268 716 LSSLSS-----SSGRKISQNPRLDLQCNAYLKNFSQGNHRW 751 (764)
Q Consensus 716 ~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 751 (764)
...... ........+...+..+.++++.|++.++.-
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~ 318 (344)
T 1rjb_A 278 IPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRK 318 (344)
T ss_dssp CCCSHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGG
T ss_pred CCcHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCchh
Confidence 654221 111233345557889999999999987433
No 142
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=4.6e-36 Score=312.00 Aligned_cols=234 Identities=29% Similarity=0.446 Sum_probs=201.2
Q ss_pred hhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEEEEE
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFLI 585 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 585 (764)
.+.|++.+.||+|+||+||+|... +++.||+|++........ .+.+.+|+.++++++||||+++++++.+....++|
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~--~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 98 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDE--IEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWII 98 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTT--HHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHH--HHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEE
Confidence 467999999999999999999754 789999999976554332 47889999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeeccccccCC
Q 004268 586 YEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLARLLHP 665 (764)
Q Consensus 586 ~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 665 (764)
|||+++++|.+++.. ..+++..+..++.|++.||.||| ++||+||||||+||+++.++.+||+|||.+.....
T Consensus 99 ~e~~~~~~L~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~ 171 (303)
T 3a7i_A 99 MEYLGGGSALDLLEP----GPLDETQIATILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTD 171 (303)
T ss_dssp EECCTTEEHHHHHTT----SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECBT
T ss_pred EEeCCCCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCChheEEECCCCCEEEeecccceecCc
Confidence 999999999999863 35899999999999999999999 88999999999999999999999999999987765
Q ss_pred CCCCceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccccccc----cCCcCCCCCCCcHHHHHHH
Q 004268 666 DSSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSSS----SGRKISQNPRLDLQCNAYL 741 (764)
Q Consensus 666 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 741 (764)
.........|++.|+|||++.+..++.++||||+|+++|+|++|+.||......... ...........+..+.+++
T Consensus 172 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 251 (303)
T 3a7i_A 172 TQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFV 251 (303)
T ss_dssp TBCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCCSSCCHHHHHHH
T ss_pred cccccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHHhhcCCCCCCccccCHHHHHHH
Confidence 444445567899999999999999999999999999999999999999876543221 1112223446788999999
Q ss_pred hhhhccch
Q 004268 742 KNFSQGNH 749 (764)
Q Consensus 742 ~~~l~~~~ 749 (764)
+.|++.++
T Consensus 252 ~~~l~~dp 259 (303)
T 3a7i_A 252 EACLNKEP 259 (303)
T ss_dssp HHHCCSSG
T ss_pred HHHcCCCh
Confidence 99999873
No 143
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=1.9e-36 Score=311.65 Aligned_cols=237 Identities=28% Similarity=0.418 Sum_probs=191.4
Q ss_pred HhhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEEEE
Q 004268 506 ATEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFL 584 (764)
Q Consensus 506 ~~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 584 (764)
..++|.+.+.||+|+||+||+|... +++.||+|++........ .+.+.+|++++++++||||+++++++.+....++
T Consensus 20 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~--~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 97 (285)
T 3is5_A 20 IDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVP--MEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYI 97 (285)
T ss_dssp HHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSC--HHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred hhhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchh--HHHHHHHHHHHHhCCCchHHhHHHheecCCeEEE
Confidence 3578999999999999999999864 789999999876554332 3778899999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHhcCc-cccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeee---cCCCCEEEeeeccc
Q 004268 585 IYEYMERGSLFCVLRNDV-EAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILL---NSNLEAFVADFGLA 660 (764)
Q Consensus 585 v~e~~~~~~L~~~l~~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll---~~~~~~kl~Dfg~~ 660 (764)
||||+++++|.+++.... ....+++..+..++.|++.||+||| ++||+||||||+||++ +.++.+||+|||.+
T Consensus 98 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a 174 (285)
T 3is5_A 98 VMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH---SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLA 174 (285)
T ss_dssp EECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEESSSSTTCCEEECCCCCC
T ss_pred EEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEEECCCCHHHEEEecCCCCCCEEEEeeecc
Confidence 999999999999886421 2356899999999999999999999 8999999999999999 45688999999999
Q ss_pred cccCCCCCCceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCccccccccc------CCcCCCCCCCc
Q 004268 661 RLLHPDSSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSSSS------GRKISQNPRLD 734 (764)
Q Consensus 661 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~~~------~~~~~~~~~~~ 734 (764)
....... ......|++.|+|||++. ..++.++||||+|+++|+|++|+.||.+........ .........++
T Consensus 175 ~~~~~~~-~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (285)
T 3is5_A 175 ELFKSDE-HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRPLT 252 (285)
T ss_dssp CC-----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCC--CCCC
T ss_pred eecCCcc-cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhccCCcccccccCcCC
Confidence 7664332 234467899999999876 468999999999999999999999998765422211 11112233468
Q ss_pred HHHHHHHhhhhccch
Q 004268 735 LQCNAYLKNFSQGNH 749 (764)
Q Consensus 735 ~~~~~~~~~~l~~~~ 749 (764)
..+.+++++|++.++
T Consensus 253 ~~~~~li~~~L~~dP 267 (285)
T 3is5_A 253 PQAVDLLKQMLTKDP 267 (285)
T ss_dssp HHHHHHHHHHTCSCT
T ss_pred HHHHHHHHHHccCCh
Confidence 899999999998873
No 144
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=1.4e-37 Score=333.47 Aligned_cols=234 Identities=17% Similarity=0.190 Sum_probs=185.6
Q ss_pred hhcCCcceeeeecCceeEEEEEE-CCCCEEEEEEccCCCCCcHHHHHHHHHHHH---HHHhcCCCceeeEe-------eE
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQL-SSGKLVALKKLHRSETEEPAFLESFQTEAR---LLSQIRHRNIVKLY-------GF 575 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~---~l~~l~hpniv~~~-------~~ 575 (764)
.++|++.+.||+|+||+||+|.+ .+|+.||||++...........+.+.+|++ ++++++||||++++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 47899999999999999999985 579999999998655444445688899994 55555899999998 66
Q ss_pred EeeCC-----------------EEEEEEEecCCCCHHHHHhcCcc----ccccCHHHHHHHHHHHHHHHHHHHhcCCCCc
Q 004268 576 CLHNK-----------------CMFLIYEYMERGSLFCVLRNDVE----AVELDWTKRVNIVKSMAHALSYLHYDCKPSI 634 (764)
Q Consensus 576 ~~~~~-----------------~~~lv~e~~~~~~L~~~l~~~~~----~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~i 634 (764)
+.+.+ ..|+||||+ +|+|.+++..... ...+++..+..++.||+.||+||| ++||
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH---HYGL 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHH---HTTE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHH---hCCe
Confidence 65543 288999999 5799999974311 112345788889999999999999 8899
Q ss_pred EEcCCCCCCeeecCCCCEEEeeeccccccCCCCCCceecccccccccccccccC-----------CCCccchHHHHHHHH
Q 004268 635 VHRDISSNNILLNSNLEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYTM-----------AVTEKCDVYSFGVVA 703 (764)
Q Consensus 635 iH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-----------~~~~~~DiwslG~il 703 (764)
+||||||+||+++.++.+||+|||+++.... ......| +.|+|||++.+. .++.++|||||||++
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~---~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il 303 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA---RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVI 303 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTC---EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecCC---cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHH
Confidence 9999999999999999999999999986432 3344567 999999999887 899999999999999
Q ss_pred HHHHhCCCCCCcccccccccCCcCCCCCCCcHHHHHHHhhhhccch
Q 004268 704 LEVLMGSHPTDLLSSLSSSSGRKISQNPRLDLQCNAYLKNFSQGNH 749 (764)
Q Consensus 704 ~~lltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 749 (764)
|+|++|+.||.+........ ......+.++..+.+++++|++.++
T Consensus 304 ~elltg~~Pf~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~L~~dp 348 (377)
T 3byv_A 304 YWIWCADLPITKDAALGGSE-WIFRSCKNIPQPVRALLEGFLRYPK 348 (377)
T ss_dssp HHHHHSSCCC------CCSG-GGGSSCCCCCHHHHHHHHHHTCSSG
T ss_pred HHHHHCCCCCcccccccchh-hhhhhccCCCHHHHHHHHHHcCCCc
Confidence 99999999998766543222 2223346789999999999999873
No 145
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=9.4e-37 Score=323.31 Aligned_cols=240 Identities=26% Similarity=0.412 Sum_probs=199.3
Q ss_pred HhhcCCcceeeeecCceeEEEEEEC------CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeC
Q 004268 506 ATEDFHIKYCIGTGGYGSVYRAQLS------SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHN 579 (764)
Q Consensus 506 ~~~~y~~~~~ig~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~ 579 (764)
..++|++.+.||+|+||.||+|++. +++.||+|++..... ....+.+.+|++++++++||||+++++++.+.
T Consensus 45 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~ 122 (343)
T 1luf_A 45 PRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEAS--ADMQADFQREAALMAEFDNPNIVKLLGVCAVG 122 (343)
T ss_dssp CGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCC--HHHHHHHHHHHHHHHTCCCTTBCCEEEEECSS
T ss_pred cHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccC--HHHHHHHHHHHHHHHhCCCCCEEEEEEEEccC
Confidence 4578999999999999999999864 347899999976543 34457899999999999999999999999999
Q ss_pred CEEEEEEEecCCCCHHHHHhcCcc---------------------ccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcC
Q 004268 580 KCMFLIYEYMERGSLFCVLRNDVE---------------------AVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRD 638 (764)
Q Consensus 580 ~~~~lv~e~~~~~~L~~~l~~~~~---------------------~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~D 638 (764)
+..++||||+++++|.+++..... ...+++..+..++.||+.||+||| ++||+|||
T Consensus 123 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH---~~~ivH~D 199 (343)
T 1luf_A 123 KPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLS---ERKFVHRD 199 (343)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSC
T ss_pred CceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCC
Confidence 999999999999999999975321 156899999999999999999999 89999999
Q ss_pred CCCCCeeecCCCCEEEeeeccccccCCCC--CCceecccccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCc
Q 004268 639 ISSNNILLNSNLEAFVADFGLARLLHPDS--SNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLM-GSHPTDL 715 (764)
Q Consensus 639 lkp~NIll~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~llt-g~~Pf~~ 715 (764)
|||+||+++.++.+||+|||.+....... .......+++.|+|||++.+..++.++||||+|+++|+|++ |..||.+
T Consensus 200 lkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~ 279 (343)
T 1luf_A 200 LATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYG 279 (343)
T ss_dssp CSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred CCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCC
Confidence 99999999999999999999998764322 12233567889999999999999999999999999999999 9999987
Q ss_pred ccccccc----cCCcCCCCCCCcHHHHHHHhhhhccchh
Q 004268 716 LSSLSSS----SGRKISQNPRLDLQCNAYLKNFSQGNHR 750 (764)
Q Consensus 716 ~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 750 (764)
....+.. .......+...+..+.++++.|++.++.
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~ 318 (343)
T 1luf_A 280 MAHEEVIYYVRDGNILACPENCPLELYNLMRLCWSKLPA 318 (343)
T ss_dssp SCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGG
T ss_pred CChHHHHHHHhCCCcCCCCCCCCHHHHHHHHHHcccCcc
Confidence 6543221 1122233456788999999999998743
No 146
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=2e-36 Score=324.85 Aligned_cols=239 Identities=24% Similarity=0.378 Sum_probs=199.8
Q ss_pred hhcCCcceeeeecCceeEEEEEEC--------CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhc-CCCceeeEeeEEe
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLS--------SGKLVALKKLHRSETEEPAFLESFQTEARLLSQI-RHRNIVKLYGFCL 577 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~ 577 (764)
.++|.+.+.||+|+||+||+|.+. .+..||+|++..... ....+.+.+|+++++++ +||||+++++++.
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~ 145 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDAT--EKDLSDLISEMEMMKMIGKHKNIINLLGACT 145 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCC--HHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccC--HHHHHHHHHHHHHHHHhcCCchhhhheeeec
Confidence 578999999999999999999752 235799999976543 34457889999999999 9999999999999
Q ss_pred eCCEEEEEEEecCCCCHHHHHhcCcc-------------ccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCe
Q 004268 578 HNKCMFLIYEYMERGSLFCVLRNDVE-------------AVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNI 644 (764)
Q Consensus 578 ~~~~~~lv~e~~~~~~L~~~l~~~~~-------------~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NI 644 (764)
+.+..++||||+++|+|.+++..... ...+++..++.++.||+.||+||| ++||+||||||+||
T Consensus 146 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NI 222 (382)
T 3tt0_A 146 QDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNV 222 (382)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGE
T ss_pred cCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCcceE
Confidence 99999999999999999999975431 235899999999999999999999 88999999999999
Q ss_pred eecCCCCEEEeeeccccccCCCCC--CceecccccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCccccccc
Q 004268 645 LLNSNLEAFVADFGLARLLHPDSS--NRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLM-GSHPTDLLSSLSS 721 (764)
Q Consensus 645 ll~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~llt-g~~Pf~~~~~~~~ 721 (764)
+++.++.+||+|||+++....... ......+++.|+|||++.+..++.++||||+||++|+|++ |..||.+....+.
T Consensus 223 ll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~~ 302 (382)
T 3tt0_A 223 LVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 302 (382)
T ss_dssp EECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHH
T ss_pred EEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHH
Confidence 999999999999999987654322 2223456889999999999999999999999999999999 9999987654222
Q ss_pred c----cCCcCCCCCCCcHHHHHHHhhhhccchh
Q 004268 722 S----SGRKISQNPRLDLQCNAYLKNFSQGNHR 750 (764)
Q Consensus 722 ~----~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 750 (764)
. .......+...+..+.++++.|++.++.
T Consensus 303 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~ 335 (382)
T 3tt0_A 303 FKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPS 335 (382)
T ss_dssp HHHHHTTCCCCCCSSCCHHHHHHHHHHTCSSGG
T ss_pred HHHHHcCCCCCCCccCCHHHHHHHHHHcCCChh
Confidence 1 1223334556788999999999988733
No 147
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=7.2e-37 Score=326.08 Aligned_cols=239 Identities=26% Similarity=0.356 Sum_probs=197.1
Q ss_pred hhcCCcceeeeecCceeEEEEEEC------CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCC
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLS------SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNK 580 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~ 580 (764)
.++|++.+.||+|+||+||+|.+. +++.||+|++..... ......+.+|+.++++++||||+++++++.+..
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~ 147 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS--EQDELDFLMEALIISKFNHQNIVRCIGVSLQSL 147 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCC--HHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccC--hhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCC
Confidence 578999999999999999999743 567899999975433 233467889999999999999999999999999
Q ss_pred EEEEEEEecCCCCHHHHHhcCc----cccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCC---CEE
Q 004268 581 CMFLIYEYMERGSLFCVLRNDV----EAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNL---EAF 653 (764)
Q Consensus 581 ~~~lv~e~~~~~~L~~~l~~~~----~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~---~~k 653 (764)
..++||||+++|+|.+++.... ....+++..+..++.||+.||+||| ++||+||||||+||+++.++ .+|
T Consensus 148 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~~~~k 224 (367)
T 3l9p_A 148 PRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAK 224 (367)
T ss_dssp SCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEE
T ss_pred CCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChhhEEEecCCCCceEE
Confidence 9999999999999999997532 2245899999999999999999999 89999999999999999555 599
Q ss_pred EeeeccccccCCC--CCCceecccccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccccccc----cCCc
Q 004268 654 VADFGLARLLHPD--SSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLM-GSHPTDLLSSLSSS----SGRK 726 (764)
Q Consensus 654 l~Dfg~~~~~~~~--~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~llt-g~~Pf~~~~~~~~~----~~~~ 726 (764)
|+|||+++..... ........+|+.|+|||++.+..++.++||||+||++|||++ |..||......+.. ....
T Consensus 225 L~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~i~~~~~ 304 (367)
T 3l9p_A 225 IGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGR 304 (367)
T ss_dssp ECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCC
T ss_pred ECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC
Confidence 9999999765321 122334567899999999999999999999999999999998 99999876653221 1222
Q ss_pred CCCCCCCcHHHHHHHhhhhccchh
Q 004268 727 ISQNPRLDLQCNAYLKNFSQGNHR 750 (764)
Q Consensus 727 ~~~~~~~~~~~~~~~~~~l~~~~~ 750 (764)
.......+..+.++++.|++.++.
T Consensus 305 ~~~~~~~~~~l~~li~~~l~~dP~ 328 (367)
T 3l9p_A 305 MDPPKNCPGPVYRIMTQCWQHQPE 328 (367)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSGG
T ss_pred CCCCccCCHHHHHHHHHHcCCCHh
Confidence 334556788999999999998733
No 148
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=1.4e-36 Score=319.95 Aligned_cols=236 Identities=25% Similarity=0.359 Sum_probs=192.2
Q ss_pred HhhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEEEE
Q 004268 506 ATEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFL 584 (764)
Q Consensus 506 ~~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 584 (764)
..++|++.+.||+|+||+||+|+.. +|+.||+|++...... ....+.+.+|++++++++||||+++++++.+.+..++
T Consensus 23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 101 (331)
T 4aaa_A 23 SMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDD-KMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYL 101 (331)
T ss_dssp CGGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred hhhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCc-hHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEE
Confidence 3589999999999999999999865 6899999998765433 3445678899999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeeccccccC
Q 004268 585 IYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLARLLH 664 (764)
Q Consensus 585 v~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~ 664 (764)
||||++++++..+.. ....+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||.+....
T Consensus 102 v~e~~~~~~l~~~~~---~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 175 (331)
T 4aaa_A 102 VFEFVDHTILDDLEL---FPNGLDYQVVQKYLFQIINGIGFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLA 175 (331)
T ss_dssp EEECCSEEHHHHHHH---STTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCTTC----
T ss_pred EEecCCcchHHHHHh---hccCCCHHHHHHHHHHHHHHHHHHH---HCCEEccCcChheEEEcCCCcEEEEeCCCceeec
Confidence 999999999988876 3345899999999999999999999 8999999999999999999999999999998765
Q ss_pred CCCCCceecccccccccccccccC-CCCccchHHHHHHHHHHHHhCCCCCCcccccccccC-------------------
Q 004268 665 PDSSNRTLVVGTYGYIAPELAYTM-AVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSSSSG------------------- 724 (764)
Q Consensus 665 ~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~~~~------------------- 724 (764)
..........|++.|+|||++.+. .++.++||||+|+++|+|++|+.||.+....+....
T Consensus 176 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (331)
T 4aaa_A 176 APGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKN 255 (331)
T ss_dssp --------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHC
T ss_pred CCccccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhc
Confidence 544444556789999999998875 789999999999999999999999986653211000
Q ss_pred ---------------CcCCCCCCCcHHHHHHHhhhhccc
Q 004268 725 ---------------RKISQNPRLDLQCNAYLKNFSQGN 748 (764)
Q Consensus 725 ---------------~~~~~~~~~~~~~~~~~~~~l~~~ 748 (764)
......+.++..+.+++++|++.+
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~d 294 (331)
T 4aaa_A 256 PVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHID 294 (331)
T ss_dssp GGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSS
T ss_pred cccccccCccccccchhhhcccchhHHHHHHHHHHhccC
Confidence 000113457889999999999987
No 149
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=2.7e-36 Score=321.39 Aligned_cols=245 Identities=26% Similarity=0.391 Sum_probs=201.5
Q ss_pred CHHHHHHHhhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCC-----cHHHHHHHHHHHHHHHhc-CCCceee
Q 004268 499 TFEEMIEATEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETE-----EPAFLESFQTEARLLSQI-RHRNIVK 571 (764)
Q Consensus 499 ~~~~~~~~~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-----~~~~~~~~~~E~~~l~~l-~hpniv~ 571 (764)
.+.......++|++.+.||+|+||.||+|.+. +|+.||||++...... .....+.+.+|+.+++++ +||||++
T Consensus 85 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~ 164 (365)
T 2y7j_A 85 DWAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIIT 164 (365)
T ss_dssp HHHHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCC
T ss_pred cchhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 34455667789999999999999999999875 7999999998765422 123346788999999999 7999999
Q ss_pred EeeEEeeCCEEEEEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCC
Q 004268 572 LYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLE 651 (764)
Q Consensus 572 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~ 651 (764)
+++++......++||||+++++|.+++.. ...+++..+..++.||+.||.||| +.||+||||||+||+++.++.
T Consensus 165 ~~~~~~~~~~~~lv~e~~~g~~L~~~l~~---~~~l~~~~~~~i~~qi~~~L~~LH---~~gi~H~Dlkp~NIl~~~~~~ 238 (365)
T 2y7j_A 165 LIDSYESSSFMFLVFDLMRKGELFDYLTE---KVALSEKETRSIMRSLLEAVSFLH---ANNIVHRDLKPENILLDDNMQ 238 (365)
T ss_dssp EEEEEEBSSEEEEEECCCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCC
T ss_pred EEEEEeeCCEEEEEEEeCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCC
Confidence 99999999999999999999999999973 346899999999999999999999 889999999999999999999
Q ss_pred EEEeeeccccccCCCCCCceeccccccccccccccc------CCCCccchHHHHHHHHHHHHhCCCCCCcccccccccC-
Q 004268 652 AFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYT------MAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSSSSG- 724 (764)
Q Consensus 652 ~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~------~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~~~~- 724 (764)
+||+|||++....... ......||+.|+|||++.+ ..++.++||||+||++|+|++|+.||...........
T Consensus 239 ikl~DfG~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~i 317 (365)
T 2y7j_A 239 IRLSDFGFSCHLEPGE-KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMI 317 (365)
T ss_dssp EEECCCTTCEECCTTC-CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH
T ss_pred EEEEecCcccccCCCc-ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHHHH
Confidence 9999999998765433 2344679999999998863 3578899999999999999999999976543221110
Q ss_pred --Cc----CCCCCCCcHHHHHHHhhhhccchh
Q 004268 725 --RK----ISQNPRLDLQCNAYLKNFSQGNHR 750 (764)
Q Consensus 725 --~~----~~~~~~~~~~~~~~~~~~l~~~~~ 750 (764)
.. .......+..+.+++++|++.++.
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~ 349 (365)
T 2y7j_A 318 MEGQYQFSSPEWDDRSSTVKDLISRLLQVDPE 349 (365)
T ss_dssp HHTCCCCCHHHHSSSCHHHHHHHHHHSCSSTT
T ss_pred HhCCCCCCCcccccCCHHHHHHHHHHcCCChh
Confidence 11 111235677899999999987743
No 150
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.3e-36 Score=321.66 Aligned_cols=233 Identities=23% Similarity=0.386 Sum_probs=189.0
Q ss_pred hhcCCcceeeeecCceeEEEEEECCCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCC--CceeeEeeEEeeCCEEEE
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRH--RNIVKLYGFCLHNKCMFL 584 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h--pniv~~~~~~~~~~~~~l 584 (764)
.++|++.+.||+|+||+||+|...+++.||+|++...... ....+.+.+|++++++++| |||+++++++.++...++
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~l 86 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEAD-NQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM 86 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCC-HHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccc-hHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEE
Confidence 4679999999999999999999888999999998765543 3445788999999999986 999999999999999999
Q ss_pred EEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeeccccccC
Q 004268 585 IYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLARLLH 664 (764)
Q Consensus 585 v~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~ 664 (764)
||| +.+++|.+++.. ...+++..+..++.||+.||+||| ++||+||||||+||+++ ++.+||+|||+++...
T Consensus 87 v~e-~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~al~~lH---~~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~ 158 (343)
T 3dbq_A 87 VME-CGNIDLNSWLKK---KKSIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQ 158 (343)
T ss_dssp EEC-CCSEEHHHHHHH---SCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC-
T ss_pred EEe-CCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCcceEEEE-CCcEEEeecccccccC
Confidence 999 567899999974 346889999999999999999999 88999999999999997 5789999999998765
Q ss_pred CCCC--Cceeccccccccccccccc-----------CCCCccchHHHHHHHHHHHHhCCCCCCccccccc------ccCC
Q 004268 665 PDSS--NRTLVVGTYGYIAPELAYT-----------MAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSS------SSGR 725 (764)
Q Consensus 665 ~~~~--~~~~~~g~~~y~aPE~~~~-----------~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~------~~~~ 725 (764)
.... ......||+.|+|||++.+ ..++.++||||+||++|+|++|+.||........ ....
T Consensus 159 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~ 238 (343)
T 3dbq_A 159 PDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNH 238 (343)
T ss_dssp -----------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTS
T ss_pred cccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHhcCCc
Confidence 4322 1234579999999999865 6788999999999999999999999986433110 1112
Q ss_pred cCCCCCCCcHHHHHHHhhhhccc
Q 004268 726 KISQNPRLDLQCNAYLKNFSQGN 748 (764)
Q Consensus 726 ~~~~~~~~~~~~~~~~~~~l~~~ 748 (764)
....+...+..+.++++.|++.+
T Consensus 239 ~~~~~~~~~~~l~~li~~~L~~d 261 (343)
T 3dbq_A 239 EIEFPDIPEKDLQDVLKCCLKRD 261 (343)
T ss_dssp CCCCCCCSCHHHHHHHHHHTCSS
T ss_pred ccCCcccCCHHHHHHHHHHcCCC
Confidence 22334445678999999999987
No 151
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=3.2e-36 Score=313.85 Aligned_cols=250 Identities=27% Similarity=0.337 Sum_probs=193.9
Q ss_pred HhhcCCcceeeeecCceeEEEEEE-CCCCEEEEEEccCCCCCc--HHHHHHHHHHHHHHHhc---CCCceeeEeeEEeeC
Q 004268 506 ATEDFHIKYCIGTGGYGSVYRAQL-SSGKLVALKKLHRSETEE--PAFLESFQTEARLLSQI---RHRNIVKLYGFCLHN 579 (764)
Q Consensus 506 ~~~~y~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~--~~~~~~~~~E~~~l~~l---~hpniv~~~~~~~~~ 579 (764)
..++|++.+.||+|+||+||+|++ .+++.||+|++....... ......+.+|+++++++ +||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 467999999999999999999986 479999999986433211 01114556777777776 499999999999875
Q ss_pred C-----EEEEEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEE
Q 004268 580 K-----CMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFV 654 (764)
Q Consensus 580 ~-----~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl 654 (764)
. ..++||||++ ++|.+++... ....+++..++.++.|++.||+||| ++||+||||||+||+++.++.+||
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~-~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~Nil~~~~~~~kl 161 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKA-PPPGLPAETIKDLMRQFLRGLDFLH---ANCIVHRDLKPENILVTSGGTVKL 161 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTC-CTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCTTTEEECTTSCEEE
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhc-cCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCEEE
Confidence 5 5899999997 5999999754 2334899999999999999999999 899999999999999999999999
Q ss_pred eeeccccccCCCCCCceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccccccccCC---------
Q 004268 655 ADFGLARLLHPDSSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSSSSGR--------- 725 (764)
Q Consensus 655 ~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~~~~~--------- 725 (764)
+|||.++...... ......||+.|+|||++.+..++.++||||+||++|+|++|++||.+..........
T Consensus 162 ~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~ 240 (308)
T 3g33_A 162 ADFGLARIYSYQM-ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPE 240 (308)
T ss_dssp CSCSCTTTSTTCC-CSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCT
T ss_pred eeCccccccCCCc-ccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCh
Confidence 9999998765332 334567899999999999999999999999999999999999999765542111000
Q ss_pred ---------------------cCCCCCCCcHHHHHHHhhhhccchhhH--HHhhhcCCC
Q 004268 726 ---------------------KISQNPRLDLQCNAYLKNFSQGNHRWE--NLLFKKFPY 761 (764)
Q Consensus 726 ---------------------~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~p~ 761 (764)
.....+.++..+.+++++|++.++.-| .....+.||
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h~~ 299 (308)
T 3g33_A 241 DDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSY 299 (308)
T ss_dssp TTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTT
T ss_pred hhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcCcc
Confidence 001124567888999999999873332 333444444
No 152
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=1.1e-36 Score=319.13 Aligned_cols=199 Identities=31% Similarity=0.465 Sum_probs=171.5
Q ss_pred hhcCCcceeeeecCceeEEEEEECCCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCC----EE
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNK----CM 582 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~----~~ 582 (764)
.++|++.+.||+|+||+||+|++. ++.||+|++..... ......+|+.++++++||||+++++++.... ..
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 97 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQDK----QSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDL 97 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGGH----HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEE
T ss_pred hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCch----HHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceE
Confidence 578999999999999999999876 89999999865432 2345567899999999999999999998743 47
Q ss_pred EEEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCC----------CcEEcCCCCCCeeecCCCCE
Q 004268 583 FLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKP----------SIVHRDISSNNILLNSNLEA 652 (764)
Q Consensus 583 ~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~----------~iiH~Dlkp~NIll~~~~~~ 652 (764)
++||||+++|+|.++++.. .+++..+..++.|++.||+||| +. ||+||||||+||+++.++.+
T Consensus 98 ~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~qi~~al~~LH---~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~ 170 (322)
T 3soc_A 98 WLITAFHEKGSLSDFLKAN----VVSWNELCHIAETMARGLAYLH---EDIPGLKDGHKPAISHRDIKSKNVLLKNNLTA 170 (322)
T ss_dssp EEEEECCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHT---CCEEEETTEEECEEECSCCSGGGEEECTTCCE
T ss_pred EEEEecCCCCCHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHH---hhccccccccCCCEEeCCCChHhEEECCCCeE
Confidence 9999999999999999743 4899999999999999999999 88 99999999999999999999
Q ss_pred EEeeeccccccCCCCCC--ceecccccccccccccccC-----CCCccchHHHHHHHHHHHHhCCCCCCccc
Q 004268 653 FVADFGLARLLHPDSSN--RTLVVGTYGYIAPELAYTM-----AVTEKCDVYSFGVVALEVLMGSHPTDLLS 717 (764)
Q Consensus 653 kl~Dfg~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~-----~~~~~~DiwslG~il~~lltg~~Pf~~~~ 717 (764)
||+|||.++........ .....||+.|+|||++.+. .++.++||||+||++|+|+||+.||.+..
T Consensus 171 kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~ 242 (322)
T 3soc_A 171 CIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPV 242 (322)
T ss_dssp EECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCC
T ss_pred EEccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCc
Confidence 99999999876543322 2235789999999998873 55678999999999999999999998654
No 153
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=9.1e-37 Score=334.51 Aligned_cols=200 Identities=28% Similarity=0.350 Sum_probs=169.1
Q ss_pred hhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeC------
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHN------ 579 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~------ 579 (764)
.++|++.+.||+|+||+||+|.+. +++.||+|++..... .....+++.+|+++++.++||||+++++++...
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~ 139 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ-NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEF 139 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGG-SHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECcccc-ChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccC
Confidence 578999999999999999999755 789999999976532 334457888999999999999999999999654
Q ss_pred CEEEEEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeecc
Q 004268 580 KCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGL 659 (764)
Q Consensus 580 ~~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~ 659 (764)
...|+||||+++ ++.+.+.. .+++..++.++.||+.||+||| ++||+||||||+||+++.++.+||+|||+
T Consensus 140 ~~~~lv~E~~~~-~l~~~~~~-----~l~~~~~~~~~~qil~aL~~lH---~~~iiHrDlkp~NIll~~~~~~kl~DFG~ 210 (464)
T 3ttj_A 140 QDVYLVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGL 210 (464)
T ss_dssp CEEEEEEECCSE-EHHHHHTS-----CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCCC
T ss_pred CeEEEEEeCCCC-CHHHHHhh-----cCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChHhEEEeCCCCEEEEEEEe
Confidence 468999999986 46666642 3888999999999999999999 89999999999999999999999999999
Q ss_pred ccccCCCCCCceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCccc
Q 004268 660 ARLLHPDSSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLS 717 (764)
Q Consensus 660 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~ 717 (764)
++..... ......+||+.|+|||++.+..|+.++||||+||++|+|++|+.||.+.+
T Consensus 211 a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~ 267 (464)
T 3ttj_A 211 ARTAGTS-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRD 267 (464)
T ss_dssp C-----C-CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred eeecCCC-cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 9876533 23345689999999999999999999999999999999999999998765
No 154
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=4.4e-36 Score=311.96 Aligned_cols=233 Identities=25% Similarity=0.434 Sum_probs=188.1
Q ss_pred hhcCCcceeeeecCceeEEEEEECCCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEEEEEE
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFLIY 586 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 586 (764)
.++|++.+.||+|+||+||+|.+. ..+|+|+++..... ....+.+.+|++++++++||||+++++++.. +..++||
T Consensus 35 ~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~lv~ 110 (307)
T 3lb7_A 35 ASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPT-PEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVT 110 (307)
T ss_dssp TTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCC-HHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEE
T ss_pred ccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCC-HHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc-CcEEEEE
Confidence 578999999999999999999864 36899988765433 4445789999999999999999999998754 4578999
Q ss_pred EecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeeccccccCCC
Q 004268 587 EYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLARLLHPD 666 (764)
Q Consensus 587 e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 666 (764)
||+++++|.+++... ...+++..+..++.||+.||+||| ++||+||||||+||+++.++.+||+|||++......
T Consensus 111 e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~ 185 (307)
T 3lb7_A 111 QWCEGSSLYKHLHVQ--ETKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRW 185 (307)
T ss_dssp ECCSSCBHHHHHHTS--CCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCSSSEEECTTSCEEECCCCSSCC----
T ss_pred ecCCCCcHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHH---hCCEeeCCCChhhEEEcCCCCEEEccCCCceecccc
Confidence 999999999999743 346899999999999999999999 889999999999999999999999999999765321
Q ss_pred --CCCceecccccccccccccc---cCCCCccchHHHHHHHHHHHHhCCCCCCccccccccc-----C----CcCCCCCC
Q 004268 667 --SSNRTLVVGTYGYIAPELAY---TMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSSSS-----G----RKISQNPR 732 (764)
Q Consensus 667 --~~~~~~~~g~~~y~aPE~~~---~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~~~-----~----~~~~~~~~ 732 (764)
........||+.|+|||++. +..++.++||||+|+++|+|++|+.||......+... . ........
T Consensus 186 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (307)
T 3lb7_A 186 SGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKN 265 (307)
T ss_dssp --------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTCCCCCSTTSCSS
T ss_pred cccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHHHHHHHhcCCCCcchhhhhcC
Confidence 22233457899999999986 5678899999999999999999999998665422110 0 11112345
Q ss_pred CcHHHHHHHhhhhccc
Q 004268 733 LDLQCNAYLKNFSQGN 748 (764)
Q Consensus 733 ~~~~~~~~~~~~l~~~ 748 (764)
.+..+.++++.|++.+
T Consensus 266 ~~~~l~~li~~~l~~~ 281 (307)
T 3lb7_A 266 CPKAMKRLVADCVKKV 281 (307)
T ss_dssp SCHHHHHHHHHHSCSS
T ss_pred CcHHHHHHHHHHhhCC
Confidence 6788999999999877
No 155
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=4.7e-36 Score=309.72 Aligned_cols=248 Identities=17% Similarity=0.241 Sum_probs=201.2
Q ss_pred HhhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhc-CCCceeeEeeEEeeCCEEE
Q 004268 506 ATEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQI-RHRNIVKLYGFCLHNKCMF 583 (764)
Q Consensus 506 ~~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~ 583 (764)
..++|++.+.||+|+||+||+|.+. +++.||+|++........ ....+.+|+..+..+ +||||+++++++.+.+..+
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~-~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~ 87 (289)
T 1x8b_A 9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSV-DEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHML 87 (289)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSH-HHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEE
T ss_pred ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccH-HHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEE
Confidence 4688999999999999999999875 799999999986544433 246778999999999 9999999999999999999
Q ss_pred EEEEecCCCCHHHHHhcCcc-ccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCC-------------
Q 004268 584 LIYEYMERGSLFCVLRNDVE-AVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSN------------- 649 (764)
Q Consensus 584 lv~e~~~~~~L~~~l~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~------------- 649 (764)
+||||+++++|.+++..... ...+++..+..++.||+.||+||| ++||+||||||+||+++.+
T Consensus 88 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~ 164 (289)
T 1x8b_A 88 IQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIH---SMSLVHMDIKPSNIFISRTSIPNAASEEGDED 164 (289)
T ss_dssp EEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEC---------------
T ss_pred EEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHH---hCCEeecCCCHHHEEEcCCCCCcccccccccc
Confidence 99999999999999975322 245899999999999999999999 8999999999999999844
Q ss_pred ------CCEEEeeeccccccCCCCCCceecccccccccccccccC-CCCccchHHHHHHHHHHHHhCCCCCCcccccccc
Q 004268 650 ------LEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYTM-AVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSSS 722 (764)
Q Consensus 650 ------~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~~ 722 (764)
..+||+|||.+....... ...|++.|+|||++.+. .+++++||||+|+++|+|++|.+|+.........
T Consensus 165 ~~~~~~~~~kl~Dfg~~~~~~~~~----~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~ 240 (289)
T 1x8b_A 165 DWASNKVMFKIGDLGHVTRISSPQ----VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQWHEI 240 (289)
T ss_dssp -----CCCEEECCCTTCEETTCSC----CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHHHHHH
T ss_pred cccCCceEEEEcccccccccCCcc----ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhHHHHH
Confidence 479999999998765432 23589999999998876 5668999999999999999999887655443222
Q ss_pred cCC-cCCCCCCCcHHHHHHHhhhhccchhhH--HHhhhcCCC
Q 004268 723 SGR-KISQNPRLDLQCNAYLKNFSQGNHRWE--NLLFKKFPY 761 (764)
Q Consensus 723 ~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~p~ 761 (764)
... ....++.++..+.++++.|++.++.-| .....+.||
T Consensus 241 ~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~ 282 (289)
T 1x8b_A 241 RQGRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKHSV 282 (289)
T ss_dssp HTTCCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTCTT
T ss_pred HcCCCCCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhhChH
Confidence 222 223345678999999999999874333 444455554
No 156
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=3.3e-37 Score=324.52 Aligned_cols=230 Identities=18% Similarity=0.256 Sum_probs=190.7
Q ss_pred hhcCCcceeeeecCceeEEEEEE-CCCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhc-CCCceeeEeeEEeeCCEEEE
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQL-SSGKLVALKKLHRSETEEPAFLESFQTEARLLSQI-RHRNIVKLYGFCLHNKCMFL 584 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~l 584 (764)
.++|++.+.||+|+||+||+|.. .+++.||+|++...... +.+.+|+++++++ +||||+++++++...+..++
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-----~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~l 82 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRA-----PQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAM 82 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCSS-----CCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEE
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccch-----HHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEE
Confidence 46899999999999999999986 57899999998765433 4578999999999 99999999999999999999
Q ss_pred EEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCC-----EEEeeecc
Q 004268 585 IYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLE-----AFVADFGL 659 (764)
Q Consensus 585 v~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~-----~kl~Dfg~ 659 (764)
||||+ +++|.+++... ...+++..+..++.|++.||+||| ++||+||||||+||+++.++. +||+|||+
T Consensus 83 v~e~~-~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH---~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~ 156 (330)
T 2izr_A 83 VLELL-GPSLEDLFDLC--DRTFSLKTVLMIAIQLISRMEYVH---SKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFAL 156 (330)
T ss_dssp EEECC-CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECCGGGTCTTSEEECCCTT
T ss_pred EEEeC-CCCHHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeeeccCCCCCCceEEEEEccc
Confidence 99999 89999999753 346899999999999999999999 889999999999999998887 99999999
Q ss_pred ccccCCCCCC-------ceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccccccccC------Cc
Q 004268 660 ARLLHPDSSN-------RTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSSSSG------RK 726 (764)
Q Consensus 660 ~~~~~~~~~~-------~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~~~~------~~ 726 (764)
++........ .....||+.|+|||++.+..++.++|||||||++|+|++|+.||.+......... ..
T Consensus 157 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~ 236 (330)
T 2izr_A 157 AKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTK 236 (330)
T ss_dssp CEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHH
T ss_pred ceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhh
Confidence 9876443221 2346799999999999999999999999999999999999999987543221100 00
Q ss_pred CCC-----CCCCcHHHHHHHhhhhccc
Q 004268 727 ISQ-----NPRLDLQCNAYLKNFSQGN 748 (764)
Q Consensus 727 ~~~-----~~~~~~~~~~~~~~~l~~~ 748 (764)
... ....+ .+.++++.|++.+
T Consensus 237 ~~~~~~~~~~~~p-~~~~li~~~l~~~ 262 (330)
T 2izr_A 237 RATPIEVLCENFP-EMATYLRYVRRLD 262 (330)
T ss_dssp HHSCHHHHTTTCH-HHHHHHHHHHHCC
T ss_pred ccCCHHHHhccCh-HHHHHHHHHHhCC
Confidence 000 12234 7888888888766
No 157
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=1.7e-36 Score=317.05 Aligned_cols=240 Identities=25% Similarity=0.403 Sum_probs=200.1
Q ss_pred hhcCCcceeeeecCceeEEEEEE------CCCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCC
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQL------SSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNK 580 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~ 580 (764)
.++|.+.+.||+|+||.||+|.+ .+++.||+|++.... .....+.+.+|++++++++||||+++++++.+.+
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~ 99 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA--SPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDG 99 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCC--CHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCC
Confidence 57899999999999999999975 245789999997544 2344578899999999999999999999999999
Q ss_pred EEEEEEEecCCCCHHHHHhcCcc---------------------ccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCC
Q 004268 581 CMFLIYEYMERGSLFCVLRNDVE---------------------AVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDI 639 (764)
Q Consensus 581 ~~~lv~e~~~~~~L~~~l~~~~~---------------------~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dl 639 (764)
..++||||+++++|.+++..... ...+++..+..++.||+.||+||| ++||+||||
T Consensus 100 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~di 176 (314)
T 2ivs_A 100 PLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLA---EMKLVHRDL 176 (314)
T ss_dssp SCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHH---HTTEECCCC
T ss_pred ceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHH---HCCCccccc
Confidence 99999999999999999975432 234889999999999999999999 889999999
Q ss_pred CCCCeeecCCCCEEEeeeccccccCCCCCC--ceecccccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcc
Q 004268 640 SSNNILLNSNLEAFVADFGLARLLHPDSSN--RTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLM-GSHPTDLL 716 (764)
Q Consensus 640 kp~NIll~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~llt-g~~Pf~~~ 716 (764)
||+||+++.++.+||+|||.+......... .....+++.|+|||++.+..++.++||||+|+++|+|++ |+.||.+.
T Consensus 177 kp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~ 256 (314)
T 2ivs_A 177 AARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGI 256 (314)
T ss_dssp SGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred chheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 999999999999999999999876443221 223456788999999999899999999999999999999 99999876
Q ss_pred cccccc----cCCcCCCCCCCcHHHHHHHhhhhccchhh
Q 004268 717 SSLSSS----SGRKISQNPRLDLQCNAYLKNFSQGNHRW 751 (764)
Q Consensus 717 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 751 (764)
...... .......+...+..+.+++++|++.++.-
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~ 295 (314)
T 2ivs_A 257 PPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDK 295 (314)
T ss_dssp CGGGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGG
T ss_pred CHHHHHHHhhcCCcCCCCccCCHHHHHHHHHHccCChhh
Confidence 553221 11223345567889999999999877443
No 158
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=2e-36 Score=309.28 Aligned_cols=236 Identities=29% Similarity=0.480 Sum_probs=185.8
Q ss_pred hhcCCcceeeeecCceeEEEEEECCCCEEEEEEccCCCCCc-HHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEEEEE
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEE-PAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFLI 585 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 585 (764)
.++|++.+.||+|+||+||+|.+. ++.||+|++....... ....+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV 84 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred hhheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence 468999999999999999999876 8999999987654332 22346788999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCC---cEEcCCCCCCeeecC--------CCCEEE
Q 004268 586 YEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPS---IVHRDISSNNILLNS--------NLEAFV 654 (764)
Q Consensus 586 ~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~---iiH~Dlkp~NIll~~--------~~~~kl 654 (764)
|||+++++|.+++.. ..+++..+..++.|++.||+||| ++| |+||||||+||+++. ++.+||
T Consensus 85 ~e~~~~~~L~~~~~~----~~~~~~~~~~i~~~l~~~l~~lH---~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl 157 (271)
T 3dtc_A 85 MEFARGGPLNRVLSG----KRIPPDILVNWAVQIARGMNYLH---DEAIVPIIHRDLKSSNILILQKVENGDLSNKILKI 157 (271)
T ss_dssp EECCTTEEHHHHHTS----SCCCHHHHHHHHHHHHHHHHHHH---HSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEE
T ss_pred EEcCCCCCHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHH---hCCCCceeecCCchHHEEEecccccccccCcceEE
Confidence 999999999999853 35899999999999999999999 778 999999999999985 778999
Q ss_pred eeeccccccCCCCCCceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccccccc-----cCCcCCC
Q 004268 655 ADFGLARLLHPDSSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSSS-----SGRKISQ 729 (764)
Q Consensus 655 ~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~~-----~~~~~~~ 729 (764)
+|||.+........ ....|++.|+|||++.+..++.++||||+|+++|+|++|+.||.+....... .......
T Consensus 158 ~Dfg~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 235 (271)
T 3dtc_A 158 TDFGLAREWHRTTK--MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPI 235 (271)
T ss_dssp CCCCC---------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHTSCCCCCC
T ss_pred ccCCcccccccccc--cCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhhcCCCCCCC
Confidence 99999986643322 2457899999999999999999999999999999999999999876643221 1122333
Q ss_pred CCCCcHHHHHHHhhhhccchhhH
Q 004268 730 NPRLDLQCNAYLKNFSQGNHRWE 752 (764)
Q Consensus 730 ~~~~~~~~~~~~~~~l~~~~~~~ 752 (764)
+...+..+.+++++|++.++.-|
T Consensus 236 ~~~~~~~~~~li~~~l~~~p~~R 258 (271)
T 3dtc_A 236 PSTCPEPFAKLMEDCWNPDPHSR 258 (271)
T ss_dssp CTTCCHHHHHHHHHHTCSSGGGS
T ss_pred CcccCHHHHHHHHHHhcCCcccC
Confidence 45678899999999998774433
No 159
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=1.7e-36 Score=318.39 Aligned_cols=242 Identities=24% Similarity=0.387 Sum_probs=184.1
Q ss_pred hhcCCcceeeeecCceeEEEEEECC-CC---EEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEE
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLSS-GK---LVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCM 582 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~~-~~---~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 582 (764)
.++|++.+.||+|+||+||+|.+.. ++ .||+|++....... ...+.+.+|++++++++||||+++++++......
T Consensus 22 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 100 (323)
T 3qup_A 22 EQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIAS-SDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAK 100 (323)
T ss_dssp ---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------C-HHHHHHHHHHHHHTTCCCTTBCCCCEEEECC---
T ss_pred hhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCH-HHHHHHHHHHHHHHHCCCCceehhhceeeccccc
Confidence 5789999999999999999997653 32 79999997654333 3357889999999999999999999999877655
Q ss_pred ------EEEEEecCCCCHHHHHhcCc---cccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEE
Q 004268 583 ------FLIYEYMERGSLFCVLRNDV---EAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAF 653 (764)
Q Consensus 583 ------~lv~e~~~~~~L~~~l~~~~---~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~k 653 (764)
++||||+++++|.+++.... ....+++..+..++.|++.||+||| ++||+||||||+||+++.++.+|
T Consensus 101 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~ivH~Dikp~NIli~~~~~~k 177 (323)
T 3qup_A 101 GRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLS---SRNFIHRDLAARNCMLAEDMTVC 177 (323)
T ss_dssp ----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTSCEE
T ss_pred cCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHH---cCCcccCCCCcceEEEcCCCCEE
Confidence 99999999999999986432 1225899999999999999999999 89999999999999999999999
Q ss_pred EeeeccccccCCCCC--CceecccccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccccccc----cCCc
Q 004268 654 VADFGLARLLHPDSS--NRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLM-GSHPTDLLSSLSSS----SGRK 726 (764)
Q Consensus 654 l~Dfg~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~llt-g~~Pf~~~~~~~~~----~~~~ 726 (764)
|+|||.++....... ......+++.|+|||++.+..++.++||||+|+++|+|++ |+.||.+....+.. ....
T Consensus 178 l~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~ 257 (323)
T 3qup_A 178 VADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGNR 257 (323)
T ss_dssp ECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCC
T ss_pred EeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHHHHHHhcCCC
Confidence 999999987643322 1223456788999999999999999999999999999999 99999876653321 1233
Q ss_pred CCCCCCCcHHHHHHHhhhhccchhhH
Q 004268 727 ISQNPRLDLQCNAYLKNFSQGNHRWE 752 (764)
Q Consensus 727 ~~~~~~~~~~~~~~~~~~l~~~~~~~ 752 (764)
....+..+..+.+++++|++.++.-|
T Consensus 258 ~~~~~~~~~~l~~li~~~l~~dp~~R 283 (323)
T 3qup_A 258 LKQPPECMEEVYDLMYQCWSADPKQR 283 (323)
T ss_dssp CCCCTTCCHHHHHHHHHTTCSSGGGS
T ss_pred CCCCCccCHHHHHHHHHHccCChhhC
Confidence 44566788999999999999884433
No 160
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=6.5e-37 Score=326.72 Aligned_cols=247 Identities=23% Similarity=0.348 Sum_probs=200.3
Q ss_pred HHHHHHHhhcCCcceeeeecCceeEEEEEE------CCCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhc-CCCceeeE
Q 004268 500 FEEMIEATEDFHIKYCIGTGGYGSVYRAQL------SSGKLVALKKLHRSETEEPAFLESFQTEARLLSQI-RHRNIVKL 572 (764)
Q Consensus 500 ~~~~~~~~~~y~~~~~ig~G~~g~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~ 572 (764)
..++....++|++.+.||+|+||.||+|++ .+++.||+|++...... ...+.+.+|+++++++ +||||+++
T Consensus 14 ~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~~hpniv~~ 91 (359)
T 3vhe_A 14 ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH--SEHRALMSELKILIHIGHHLNVVNL 91 (359)
T ss_dssp HHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCH--HHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred cccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCH--HHHHHHHHHHHHHHhhcCCcceeee
Confidence 344445578999999999999999999973 25678999999765432 3347789999999999 78999999
Q ss_pred eeEEeeCCE-EEEEEEecCCCCHHHHHhcCcc------------------------------------------------
Q 004268 573 YGFCLHNKC-MFLIYEYMERGSLFCVLRNDVE------------------------------------------------ 603 (764)
Q Consensus 573 ~~~~~~~~~-~~lv~e~~~~~~L~~~l~~~~~------------------------------------------------ 603 (764)
++++.+.+. .++||||+++|+|.+++.....
T Consensus 92 ~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (359)
T 3vhe_A 92 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEK 171 (359)
T ss_dssp EEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC------------------------------------------
T ss_pred eeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccccccccc
Confidence 999887554 8999999999999999975432
Q ss_pred ---------------ccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeeccccccCCCCC
Q 004268 604 ---------------AVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLARLLHPDSS 668 (764)
Q Consensus 604 ---------------~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~ 668 (764)
...+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||.+........
T Consensus 172 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 248 (359)
T 3vhe_A 172 SLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 248 (359)
T ss_dssp ------------CTTTTCBCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTT
T ss_pred ccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEEcCCCcEEEEeccceeeeccccc
Confidence 112889999999999999999999 88999999999999999999999999999987643322
Q ss_pred --CceecccccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCccccccc-----ccCCcCCCCCCCcHHHHHH
Q 004268 669 --NRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLM-GSHPTDLLSSLSS-----SSGRKISQNPRLDLQCNAY 740 (764)
Q Consensus 669 --~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~llt-g~~Pf~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 740 (764)
......||+.|+|||++.+..++.++||||+|+++|+|+| |+.||.+...... ........+...+..+.++
T Consensus 249 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 328 (359)
T 3vhe_A 249 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQT 328 (359)
T ss_dssp CEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHH
T ss_pred chhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHHcCCCCCCCCCCCHHHHHH
Confidence 2234567889999999999999999999999999999998 9999987653221 1122333445578899999
Q ss_pred Hhhhhccchhh
Q 004268 741 LKNFSQGNHRW 751 (764)
Q Consensus 741 ~~~~l~~~~~~ 751 (764)
+..|++.++.-
T Consensus 329 i~~~l~~dP~~ 339 (359)
T 3vhe_A 329 MLDCWHGEPSQ 339 (359)
T ss_dssp HHHHTCSSGGG
T ss_pred HHHHccCChhh
Confidence 99999877443
No 161
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=4.2e-36 Score=328.96 Aligned_cols=232 Identities=26% Similarity=0.408 Sum_probs=195.0
Q ss_pred hhcCCcceeeeecCceeEEEEEECCCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCC-EEEEE
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNK-CMFLI 585 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~-~~~lv 585 (764)
.++|++.+.||+|+||.||+|.+. ++.||||++..... .+.+.+|++++++++||||+++++++.... ..++|
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~~-----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv 265 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDAT-----AQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIV 265 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCTT-----SHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEE
T ss_pred hHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCchH-----HHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEE
Confidence 578999999999999999999886 78999999976542 267889999999999999999999987665 79999
Q ss_pred EEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeeccccccCC
Q 004268 586 YEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLARLLHP 665 (764)
Q Consensus 586 ~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 665 (764)
|||+++|+|.++++.. ....+++..+..++.||+.||+||| ++||+||||||+||+++.++.+||+|||+++....
T Consensus 266 ~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 341 (450)
T 1k9a_A 266 TEYMAKGSLVDYLRSR-GRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS 341 (450)
T ss_dssp EECCTTCBHHHHHHHH-CTTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTSCEEECCCTTCEECC-
T ss_pred EEecCCCcHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHhhEEECCCCCEEEeeCCCcccccc
Confidence 9999999999999753 2234788999999999999999999 89999999999999999999999999999986532
Q ss_pred CCCCceecccccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccccccc----cCCcCCCCCCCcHHHHHH
Q 004268 666 DSSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLM-GSHPTDLLSSLSSS----SGRKISQNPRLDLQCNAY 740 (764)
Q Consensus 666 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~llt-g~~Pf~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 740 (764)
. .....+++.|+|||++.+..++.++||||||+++|||++ |+.||.+....+.. .......+...+..+.++
T Consensus 342 ~---~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~l 418 (450)
T 1k9a_A 342 T---QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYDV 418 (450)
T ss_dssp --------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHHHTTCCCCCCTTCCHHHHHH
T ss_pred c---ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCcCCHHHHHH
Confidence 2 122356889999999999999999999999999999998 99999876543321 222344456678899999
Q ss_pred Hhhhhccchhh
Q 004268 741 LKNFSQGNHRW 751 (764)
Q Consensus 741 ~~~~l~~~~~~ 751 (764)
+++||+.++.-
T Consensus 419 i~~cl~~dp~~ 429 (450)
T 1k9a_A 419 MKNCWHLDAAT 429 (450)
T ss_dssp HHHHTCSSGGG
T ss_pred HHHHcCCChhH
Confidence 99999987443
No 162
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=3.5e-36 Score=323.16 Aligned_cols=232 Identities=23% Similarity=0.386 Sum_probs=188.8
Q ss_pred hcCCcceeeeecCceeEEEEEECCCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcC--CCceeeEeeEEeeCCEEEEE
Q 004268 508 EDFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIR--HRNIVKLYGFCLHNKCMFLI 585 (764)
Q Consensus 508 ~~y~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~--hpniv~~~~~~~~~~~~~lv 585 (764)
.+|++.+.||+|+||+||+|...+++.||||++...... ....+.+.+|++++++++ ||||+++++++...+..|+|
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 134 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEAD-NQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 134 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCC-HHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEeccccc-HHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEE
Confidence 569999999999999999999888999999999765543 344678999999999996 59999999999999999999
Q ss_pred EEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeeccccccCC
Q 004268 586 YEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLARLLHP 665 (764)
Q Consensus 586 ~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 665 (764)
|| +.+++|.+++... ..+++..+..++.||+.||+||| ++||+||||||+||+++ ++.+||+|||+++....
T Consensus 135 ~E-~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~lH---~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~ 206 (390)
T 2zmd_A 135 ME-CGNIDLNSWLKKK---KSIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQP 206 (390)
T ss_dssp EE-CCSEEHHHHHHHC---SSCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCCGGGEEES-SSCEEECCCSSSCCC--
T ss_pred Ee-cCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHEEEE-CCeEEEEecCccccccC
Confidence 99 5678999999743 36888899999999999999999 99999999999999995 57999999999987653
Q ss_pred CCC--Cceeccccccccccccccc-----------CCCCccchHHHHHHHHHHHHhCCCCCCccccccc------ccCCc
Q 004268 666 DSS--NRTLVVGTYGYIAPELAYT-----------MAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSS------SSGRK 726 (764)
Q Consensus 666 ~~~--~~~~~~g~~~y~aPE~~~~-----------~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~------~~~~~ 726 (764)
... .....+||+.|+|||++.+ ..++.++||||+||++|+|++|+.||........ .....
T Consensus 207 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~ 286 (390)
T 2zmd_A 207 DTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHE 286 (390)
T ss_dssp -------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHCTTSC
T ss_pred CCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHHHhCcccc
Confidence 322 1234579999999999865 3688999999999999999999999986532110 01112
Q ss_pred CCCCCCCcHHHHHHHhhhhccc
Q 004268 727 ISQNPRLDLQCNAYLKNFSQGN 748 (764)
Q Consensus 727 ~~~~~~~~~~~~~~~~~~l~~~ 748 (764)
...+...+..+.++++.|++.+
T Consensus 287 ~~~~~~~~~~~~~li~~~L~~d 308 (390)
T 2zmd_A 287 IEFPDIPEKDLQDVLKCCLKRD 308 (390)
T ss_dssp CCCCCCSCHHHHHHHHHHTCSS
T ss_pred CCCCccchHHHHHHHHHHcccC
Confidence 2233445778999999999987
No 163
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=7.2e-36 Score=325.52 Aligned_cols=200 Identities=28% Similarity=0.414 Sum_probs=169.3
Q ss_pred hhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeC-----C
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHN-----K 580 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~-----~ 580 (764)
.++|++.+.||+|+||+||+|.+. +++.||+|++..... .....+++.+|++++++++||||+++++++... .
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~ 103 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFE-DLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFD 103 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTT-SHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhc-ChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCC
Confidence 578999999999999999999865 688999999976533 344457889999999999999999999999776 5
Q ss_pred EEEEEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeeccc
Q 004268 581 CMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLA 660 (764)
Q Consensus 581 ~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~ 660 (764)
..|+||||++ ++|.+++.. ...+++..++.++.||+.||+||| ++||+||||||+||+++.++.+||+|||++
T Consensus 104 ~~~lv~e~~~-~~L~~~~~~---~~~l~~~~~~~i~~qil~aL~~LH---~~givHrDlkp~NILl~~~~~~kL~DFGla 176 (432)
T 3n9x_A 104 ELYIVLEIAD-SDLKKLFKT---PIFLTEEHIKTILYNLLLGENFIH---ESGIIHRDLKPANCLLNQDCSVKVCDFGLA 176 (432)
T ss_dssp CEEEEEECCS-EEHHHHHHS---SCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred eEEEEEecCC-cCHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHH---HCCCCCCCCCHHHeEECCCCCEEEccCCCc
Confidence 6999999997 599999973 346899999999999999999999 899999999999999999999999999999
Q ss_pred cccCCCCC----------------------Cceeccccccccccccc-ccCCCCccchHHHHHHHHHHHHhCCCCCC
Q 004268 661 RLLHPDSS----------------------NRTLVVGTYGYIAPELA-YTMAVTEKCDVYSFGVVALEVLMGSHPTD 714 (764)
Q Consensus 661 ~~~~~~~~----------------------~~~~~~g~~~y~aPE~~-~~~~~~~~~DiwslG~il~~lltg~~Pf~ 714 (764)
+....... ..+..+||+.|+|||++ .+..++.++||||+||++|||++|..||.
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 177 RTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp EEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred ccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 87643321 12456889999999986 56679999999999999999998655543
No 164
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=8.2e-37 Score=322.21 Aligned_cols=241 Identities=24% Similarity=0.383 Sum_probs=198.0
Q ss_pred HhhcCCcceeeeecCceeEEEEEEC-CC-----CEEEEEEccCCCCCcHHHHHHHHHHHHHHHhc-CCCceeeEeeEEee
Q 004268 506 ATEDFHIKYCIGTGGYGSVYRAQLS-SG-----KLVALKKLHRSETEEPAFLESFQTEARLLSQI-RHRNIVKLYGFCLH 578 (764)
Q Consensus 506 ~~~~y~~~~~ig~G~~g~V~~~~~~-~~-----~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~ 578 (764)
..++|++.+.||+|+||+||+|.+. ++ +.||+|.+..... ....+.+.+|+++++++ +||||+++++++.+
T Consensus 44 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 121 (333)
T 2i1m_A 44 PRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAH--ADEKEALMSELKIMSHLGQHENIVNLLGACTH 121 (333)
T ss_dssp CTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCC--HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred CHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccC--hHHHHHHHHHHHHHHhhcCCCCeeeEEEEEec
Confidence 4678999999999999999999864 23 4799999976543 23357889999999999 89999999999999
Q ss_pred CCEEEEEEEecCCCCHHHHHhcCcc-----------ccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeec
Q 004268 579 NKCMFLIYEYMERGSLFCVLRNDVE-----------AVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLN 647 (764)
Q Consensus 579 ~~~~~lv~e~~~~~~L~~~l~~~~~-----------~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~ 647 (764)
.+..++||||+++|+|.+++..... ...+++..+..++.|++.||+||| ++||+||||||+||+++
T Consensus 122 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~ 198 (333)
T 2i1m_A 122 GGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLT 198 (333)
T ss_dssp SSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGCEEE
T ss_pred CCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHh---cCCcccCCcccceEEEC
Confidence 9999999999999999999974321 235789999999999999999999 88999999999999999
Q ss_pred CCCCEEEeeeccccccCCCCCC--ceecccccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccccccc--
Q 004268 648 SNLEAFVADFGLARLLHPDSSN--RTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLM-GSHPTDLLSSLSSS-- 722 (764)
Q Consensus 648 ~~~~~kl~Dfg~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~llt-g~~Pf~~~~~~~~~-- 722 (764)
.++.+||+|||++......... .....+++.|+|||++.+..++.++||||+|+++|+|+| |..||.+.......
T Consensus 199 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~ 278 (333)
T 2i1m_A 199 NGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYK 278 (333)
T ss_dssp GGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHHH
T ss_pred CCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHHH
Confidence 9999999999999866433221 223456789999999999999999999999999999998 99999875532211
Q ss_pred ---cCCcCCCCCCCcHHHHHHHhhhhccchhh
Q 004268 723 ---SGRKISQNPRLDLQCNAYLKNFSQGNHRW 751 (764)
Q Consensus 723 ---~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 751 (764)
.......+...+..+.++++.|++.++.-
T Consensus 279 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~ 310 (333)
T 2i1m_A 279 LVKDGYQMAQPAFAPKNIYSIMQACWALEPTH 310 (333)
T ss_dssp HHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGG
T ss_pred HHhcCCCCCCCCCCCHHHHHHHHHHhccChhh
Confidence 11223334556889999999999887443
No 165
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=2.4e-36 Score=335.03 Aligned_cols=234 Identities=24% Similarity=0.409 Sum_probs=194.1
Q ss_pred HhhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEEEE
Q 004268 506 ATEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFL 584 (764)
Q Consensus 506 ~~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 584 (764)
..++|++.+.||+|+||+||+|... +++.||+|++........ ....+.+|++++++++||||+++++++.+....|+
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 98 (486)
T 3mwu_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNK-DTSTILREVELLKKLDHPNIMKLFEILEDSSSFYI 98 (486)
T ss_dssp HHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCS-CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred hhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccch-HHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEE
Confidence 4688999999999999999999865 799999999864322111 13678899999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeec---CCCCEEEeeecccc
Q 004268 585 IYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLN---SNLEAFVADFGLAR 661 (764)
Q Consensus 585 v~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~---~~~~~kl~Dfg~~~ 661 (764)
||||+++++|.+.+.. ...+++..+..++.||+.||+||| ++||+||||||+||+++ .++.+||+|||++.
T Consensus 99 v~e~~~~~~L~~~~~~---~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 172 (486)
T 3mwu_A 99 VGELYTGGELFDEIIK---RKRFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLST 172 (486)
T ss_dssp EECCCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTT
T ss_pred EEEcCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCchHHEEEecCCCCCCEEEEECCcCe
Confidence 9999999999998863 346899999999999999999999 89999999999999995 45679999999998
Q ss_pred ccCCCCCCceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccccccccC-------CcCCCCCCCc
Q 004268 662 LLHPDSSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSSSSG-------RKISQNPRLD 734 (764)
Q Consensus 662 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~~~~-------~~~~~~~~~~ 734 (764)
...... ......||+.|+|||++.+ .++.++||||+||++|+|++|++||.+....+.... ........++
T Consensus 173 ~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s 250 (486)
T 3mwu_A 173 CFQQNT-KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTIS 250 (486)
T ss_dssp TBCCC-----CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCSGGGGGSC
T ss_pred ECCCCC-ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCcccCCCC
Confidence 765432 2344679999999999876 589999999999999999999999987655322111 1122234578
Q ss_pred HHHHHHHhhhhccc
Q 004268 735 LQCNAYLKNFSQGN 748 (764)
Q Consensus 735 ~~~~~~~~~~l~~~ 748 (764)
..+.+++++|++.+
T Consensus 251 ~~~~~li~~~L~~d 264 (486)
T 3mwu_A 251 DDAKDLIRKMLTFH 264 (486)
T ss_dssp HHHHHHHHHHTCSS
T ss_pred HHHHHHHHHHcCCC
Confidence 89999999999977
No 166
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=8e-36 Score=311.25 Aligned_cols=243 Identities=21% Similarity=0.271 Sum_probs=189.4
Q ss_pred HhhcCCcceeeeecCceeEEEEEE-CCCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEEEE
Q 004268 506 ATEDFHIKYCIGTGGYGSVYRAQL-SSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFL 584 (764)
Q Consensus 506 ~~~~y~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 584 (764)
..++|++.+.||+|+||.||+|.. .+|+.||+|++...........+.+.+|++++++++||||+++++++...+..++
T Consensus 30 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 109 (310)
T 2wqm_A 30 TLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNI 109 (310)
T ss_dssp SGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred cccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEE
Confidence 357899999999999999999986 4799999999987665556667889999999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHhcCc-cccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeecccccc
Q 004268 585 IYEYMERGSLFCVLRNDV-EAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLARLL 663 (764)
Q Consensus 585 v~e~~~~~~L~~~l~~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~ 663 (764)
||||+++++|.+++.... ....+++..+..++.|++.||.||| ++|++||||||+||+++.++.+||+|||.+...
T Consensus 110 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~ 186 (310)
T 2wqm_A 110 VLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFF 186 (310)
T ss_dssp EEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCC------
T ss_pred EEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCcHHHEEEcCCCCEEEEeccceeee
Confidence 999999999999986422 2345889999999999999999999 899999999999999999999999999999876
Q ss_pred CCCCCCceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccccc-----cccC--CcCCCCCCCcHH
Q 004268 664 HPDSSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLS-----SSSG--RKISQNPRLDLQ 736 (764)
Q Consensus 664 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~-----~~~~--~~~~~~~~~~~~ 736 (764)
...........|++.|+|||++.+..++.++||||+|+++|+|++|+.||.+..... .... .........+..
T Consensus 187 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (310)
T 2wqm_A 187 SSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEE 266 (310)
T ss_dssp ------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHTTCSCCCCTTTSCHH
T ss_pred cCCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhcccCCCCcccccCHH
Confidence 544443445678999999999999999999999999999999999999997543210 0001 111122457889
Q ss_pred HHHHHhhhhccchhh
Q 004268 737 CNAYLKNFSQGNHRW 751 (764)
Q Consensus 737 ~~~~~~~~l~~~~~~ 751 (764)
+.++++.|++.+..-
T Consensus 267 l~~li~~~l~~dp~~ 281 (310)
T 2wqm_A 267 LRQLVNMCINPDPEK 281 (310)
T ss_dssp HHHHHHHHTCSSGGG
T ss_pred HHHHHHHHcCCChhh
Confidence 999999999887433
No 167
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.9e-36 Score=317.12 Aligned_cols=236 Identities=26% Similarity=0.453 Sum_probs=189.7
Q ss_pred HHhhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhc-CCCceeeEeeEEee----
Q 004268 505 EATEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQI-RHRNIVKLYGFCLH---- 578 (764)
Q Consensus 505 ~~~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~---- 578 (764)
...++|++.+.||+|+||.||+|.+. +++.||+|++....... +.+.+|+.+++++ +||||+++++++..
T Consensus 21 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~----~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~ 96 (326)
T 2x7f_A 21 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEE----EEIKQEINMLKKYSHHRNIATYYGAFIKKNPP 96 (326)
T ss_dssp CCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSTT----HHHHHHHHHHHHHCCSTTBCCEEEEEEECC--
T ss_pred CCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcccH----HHHHHHHHHHHhccCCCCeeeeeeEEeeccCc
Confidence 35688999999999999999999864 79999999987654432 6788999999999 79999999999987
Q ss_pred --CCEEEEEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEee
Q 004268 579 --NKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVAD 656 (764)
Q Consensus 579 --~~~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~D 656 (764)
.+..++||||+++++|.+++... ....+++..+..++.||+.||+||| ++||+||||||+||+++.++.+||+|
T Consensus 97 ~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~kl~D 172 (326)
T 2x7f_A 97 GMDDQLWLVMEFCGAGSVTDLIKNT-KGNTLKEEWIAYICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVD 172 (326)
T ss_dssp CCCCEEEEEEECCTTEEHHHHHHHS-GGGCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTCCEEECC
T ss_pred cccceEEEEEEcCCCCcHHHHHHhc-ccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCcHHHEEEcCCCCEEEee
Confidence 46799999999999999999754 2346899999999999999999999 88999999999999999999999999
Q ss_pred eccccccCCCCCCceecccccccccccccc-----cCCCCccchHHHHHHHHHHHHhCCCCCCccccccccc-----CCc
Q 004268 657 FGLARLLHPDSSNRTLVVGTYGYIAPELAY-----TMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSSSS-----GRK 726 (764)
Q Consensus 657 fg~~~~~~~~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~~~-----~~~ 726 (764)
||.+..............|++.|+|||++. +..++.++||||+|+++|+|++|+.||.+........ ...
T Consensus 173 fg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~ 252 (326)
T 2x7f_A 173 FGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAP 252 (326)
T ss_dssp CTTTC-------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCC
T ss_pred CcCceecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCccc
Confidence 999987654433344567899999999987 5678999999999999999999999998765432211 111
Q ss_pred CCCCCCCcHHHHHHHhhhhccc
Q 004268 727 ISQNPRLDLQCNAYLKNFSQGN 748 (764)
Q Consensus 727 ~~~~~~~~~~~~~~~~~~l~~~ 748 (764)
.......+..+.+++++|++.+
T Consensus 253 ~~~~~~~~~~l~~li~~~l~~d 274 (326)
T 2x7f_A 253 RLKSKKWSKKFQSFIESCLVKN 274 (326)
T ss_dssp CCSCSCSCHHHHHHHHHHCCSS
T ss_pred cCCccccCHHHHHHHHHHhccC
Confidence 1224557889999999999887
No 168
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.3e-36 Score=313.21 Aligned_cols=233 Identities=27% Similarity=0.440 Sum_probs=187.0
Q ss_pred hhcCCcceeeeecCceeEEEEEECCCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEEEEEE
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFLIY 586 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 586 (764)
.++|++.+.||+|+||+||+|++. ++.||+|++.... ..+.+.+|++++++++||||+++++++.+. .++||
T Consensus 7 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~-----~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~--~~lv~ 78 (307)
T 2eva_A 7 YKEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESES-----ERKAFIVELRQLSRVNHPNIVKLYGACLNP--VCLVM 78 (307)
T ss_dssp GGGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSSTT-----HHHHHHHHHHHHHHCCCTTBCCEEEBCTTT--TEEEE
T ss_pred HhHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecChh-----HHHHHHHHHHHHhcCCCCCcCeEEEEEcCC--cEEEE
Confidence 468999999999999999999886 7899999986432 237789999999999999999999988743 78999
Q ss_pred EecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCC-EEEeeeccccccCC
Q 004268 587 EYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLE-AFVADFGLARLLHP 665 (764)
Q Consensus 587 e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~-~kl~Dfg~~~~~~~ 665 (764)
||+++++|.+++........+++..+..++.|+++||+|||..+.+||+||||||+||+++.++. +||+|||.+.....
T Consensus 79 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~ 158 (307)
T 2eva_A 79 EYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQT 158 (307)
T ss_dssp ECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC------
T ss_pred EcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEccccccccccc
Confidence 99999999999986544456788999999999999999999322289999999999999998886 79999999976543
Q ss_pred CCCCceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCccccccc------ccCCcCCCCCCCcHHHHH
Q 004268 666 DSSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSS------SSGRKISQNPRLDLQCNA 739 (764)
Q Consensus 666 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~------~~~~~~~~~~~~~~~~~~ 739 (764)
. .....|++.|+|||++.+..++.++||||+|+++|+|++|+.||........ ...........++..+.+
T Consensus 159 ~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 235 (307)
T 2eva_A 159 H---MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIES 235 (307)
T ss_dssp ---------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTTCCCCCBTTCCHHHHH
T ss_pred c---cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcCCCCCcccccCHHHHH
Confidence 2 2234689999999999999999999999999999999999999986543211 111222334567889999
Q ss_pred HHhhhhccchh
Q 004268 740 YLKNFSQGNHR 750 (764)
Q Consensus 740 ~~~~~l~~~~~ 750 (764)
++++|++.++.
T Consensus 236 li~~~l~~dp~ 246 (307)
T 2eva_A 236 LMTRCWSKDPS 246 (307)
T ss_dssp HHHHHTCSSGG
T ss_pred HHHHHhcCChh
Confidence 99999998743
No 169
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=2e-36 Score=310.80 Aligned_cols=242 Identities=28% Similarity=0.448 Sum_probs=198.5
Q ss_pred hhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEee--CCEEE
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLH--NKCMF 583 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~--~~~~~ 583 (764)
.++|++.+.||+|+||+||+|... +++.||+|.+...... ....+.+.+|++++++++||||+++++++.+ ....+
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 83 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMT-EAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLY 83 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCC-HHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEE
Confidence 578999999999999999999865 7899999999765543 3345788999999999999999999998754 67899
Q ss_pred EEEEecCCCCHHHHHhcCc-cccccCHHHHHHHHHHHHHHHHHHHhcCCCC-----cEEcCCCCCCeeecCCCCEEEeee
Q 004268 584 LIYEYMERGSLFCVLRNDV-EAVELDWTKRVNIVKSMAHALSYLHYDCKPS-----IVHRDISSNNILLNSNLEAFVADF 657 (764)
Q Consensus 584 lv~e~~~~~~L~~~l~~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~-----iiH~Dlkp~NIll~~~~~~kl~Df 657 (764)
+||||+++++|.+++.... ....+++..+..++.|++.||+||| ++| |+||||||+||+++.++.+||+||
T Consensus 84 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~df 160 (279)
T 2w5a_A 84 IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECH---RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDF 160 (279)
T ss_dssp EEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HHC------CCCCCSGGGEEECSSSCEEECCC
T ss_pred EEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHh---cccCCCCeeEEeccchhhEEEcCCCCEEEecC
Confidence 9999999999999997432 2334899999999999999999999 777 999999999999999999999999
Q ss_pred ccccccCCCCCCceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccccccc----cCCcCCCCCCC
Q 004268 658 GLARLLHPDSSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSSS----SGRKISQNPRL 733 (764)
Q Consensus 658 g~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~~----~~~~~~~~~~~ 733 (764)
|.+..............|++.|+|||++.+..++.++||||+|+++|+|++|+.||......... .......+...
T Consensus 161 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~ 240 (279)
T 2w5a_A 161 GLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRY 240 (279)
T ss_dssp CHHHHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCCTTS
T ss_pred chheeeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHHHhhcccccCCccc
Confidence 99987654433333457899999999999999999999999999999999999999876542211 11122334467
Q ss_pred cHHHHHHHhhhhccchhhH
Q 004268 734 DLQCNAYLKNFSQGNHRWE 752 (764)
Q Consensus 734 ~~~~~~~~~~~l~~~~~~~ 752 (764)
+..+.+++++|++.++.-|
T Consensus 241 ~~~l~~li~~~l~~~p~~R 259 (279)
T 2w5a_A 241 SDELNEIITRMLNLKDYHR 259 (279)
T ss_dssp CHHHHHHHHHHTCSSGGGS
T ss_pred CHHHHHHHHHHcCCCcccC
Confidence 8899999999999885444
No 170
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=4.5e-36 Score=313.82 Aligned_cols=233 Identities=27% Similarity=0.427 Sum_probs=193.6
Q ss_pred HhhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEEEE
Q 004268 506 ATEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFL 584 (764)
Q Consensus 506 ~~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 584 (764)
..++|++.+.||+|+||.||+|.+. +|+.||+|.+...... +.+.+|++++++++||||+++++++...+..++
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 101 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDL-----QEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWI 101 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTSCC-----HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchHHH-----HHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEE
Confidence 4678999999999999999999865 6999999999765432 678899999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeeccccccC
Q 004268 585 IYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLARLLH 664 (764)
Q Consensus 585 v~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~ 664 (764)
||||+++++|.+++.. ....+++..+..++.|++.||.||| ++|++||||||+||+++.++.+||+|||.+....
T Consensus 102 v~e~~~~~~L~~~~~~--~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~ 176 (314)
T 3com_A 102 VMEYCGAGSVSDIIRL--RNKTLTEDEIATILQSTLKGLEYLH---FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLT 176 (314)
T ss_dssp EEECCTTEEHHHHHHH--HTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECB
T ss_pred EeecCCCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHH---hCCCcCCCcCHHHEEECCCCCEEEeecccchhhh
Confidence 9999999999999863 2346899999999999999999999 8999999999999999999999999999998765
Q ss_pred CCCCCceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCccccccccc------CCcCCCCCCCcHHHH
Q 004268 665 PDSSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSSSS------GRKISQNPRLDLQCN 738 (764)
Q Consensus 665 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~~~------~~~~~~~~~~~~~~~ 738 (764)
..........|++.|+|||++.+..++.++||||+|+++|+|++|+.||.......... ..........+..+.
T Consensus 177 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 256 (314)
T 3com_A 177 DTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELWSDNFT 256 (314)
T ss_dssp TTBSCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSSGGGSCHHHH
T ss_pred hhccccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCcccCCcccCCHHHH
Confidence 54444445678999999999999999999999999999999999999998765432111 111222334578899
Q ss_pred HHHhhhhccc
Q 004268 739 AYLKNFSQGN 748 (764)
Q Consensus 739 ~~~~~~l~~~ 748 (764)
++++.|++.+
T Consensus 257 ~li~~~l~~d 266 (314)
T 3com_A 257 DFVKQCLVKS 266 (314)
T ss_dssp HHHHHHTCSC
T ss_pred HHHHHHccCC
Confidence 9999999877
No 171
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=1e-35 Score=306.74 Aligned_cols=236 Identities=29% Similarity=0.469 Sum_probs=194.2
Q ss_pred hhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHH----HHHHHHHHHHHhcCCCceeeEeeEEeeCCE
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFL----ESFQTEARLLSQIRHRNIVKLYGFCLHNKC 581 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~----~~~~~E~~~l~~l~hpniv~~~~~~~~~~~ 581 (764)
.++|++.+.||+|+||+||+|++. +++.||+|++........... +.+.+|++++++++||||+++++++.+..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 96 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP- 96 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence 478999999999999999999864 799999999976554433222 67889999999999999999999997766
Q ss_pred EEEEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCC--cEEcCCCCCCeeecCCCC-----EEE
Q 004268 582 MFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPS--IVHRDISSNNILLNSNLE-----AFV 654 (764)
Q Consensus 582 ~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~--iiH~Dlkp~NIll~~~~~-----~kl 654 (764)
++||||+++++|.+++... ...+++..+..++.|++.||+||| ++| |+||||||+||+++.++. +||
T Consensus 97 -~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~l~~~l~~lH---~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl 170 (287)
T 4f0f_A 97 -RMVMEFVPCGDLYHRLLDK--AHPIKWSVKLRLMLDIALGIEYMQ---NQNPPIVHRDLRSPNIFLQSLDENAPVCAKV 170 (287)
T ss_dssp -EEEEECCTTCBHHHHHHCT--TSCCCHHHHHHHHHHHHHHHHHHH---TSSSCCBCSCCSGGGEEESCCCTTCSCCEEE
T ss_pred -eEEEEecCCCCHHHHHhcc--cCCccHHHHHHHHHHHHHHHHHHH---hCCCCeecCCCCcceEEEeccCCCCceeEEe
Confidence 6999999999999888643 346899999999999999999999 889 999999999999988776 999
Q ss_pred eeeccccccCCCCCCceecccccccccccccc--cCCCCccchHHHHHHHHHHHHhCCCCCCccccccc-------ccCC
Q 004268 655 ADFGLARLLHPDSSNRTLVVGTYGYIAPELAY--TMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSS-------SSGR 725 (764)
Q Consensus 655 ~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~--~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~-------~~~~ 725 (764)
+|||.+..... ......|++.|+|||++. +..++.++||||+|+++|+|++|+.||........ ....
T Consensus 171 ~Dfg~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 247 (287)
T 4f0f_A 171 ADFGLSQQSVH---SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGL 247 (287)
T ss_dssp CCCTTCBCCSS---CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSCC
T ss_pred CCCCccccccc---cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhccCC
Confidence 99999975432 334467899999999984 45678999999999999999999999986554221 1112
Q ss_pred cCCCCCCCcHHHHHHHhhhhccchhhH
Q 004268 726 KISQNPRLDLQCNAYLKNFSQGNHRWE 752 (764)
Q Consensus 726 ~~~~~~~~~~~~~~~~~~~l~~~~~~~ 752 (764)
........+..+.++++.|++.++.-|
T Consensus 248 ~~~~~~~~~~~l~~li~~~l~~dp~~R 274 (287)
T 4f0f_A 248 RPTIPEDCPPRLRNVIELCWSGDPKKR 274 (287)
T ss_dssp CCCCCTTSCHHHHHHHHHHTCSSGGGS
T ss_pred CCCCCcccCHHHHHHHHHHhcCChhhC
Confidence 233445678899999999998774433
No 172
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=5e-36 Score=311.77 Aligned_cols=232 Identities=23% Similarity=0.383 Sum_probs=194.4
Q ss_pred HhhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEEEE
Q 004268 506 ATEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFL 584 (764)
Q Consensus 506 ~~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 584 (764)
..++|.+.+.||+|+||+||+|+.. +|+.||+|++....... .+.+.+|++++++++||||+++++++.+.+..++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (304)
T 2jam_A 7 IRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFR---DSSLENEIAVLKKIKHENIVTLEDIYESTTHYYL 83 (304)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC---------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred hhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccc---hHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEE
Confidence 4678999999999999999999865 79999999997654322 2568899999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeee---cCCCCEEEeeecccc
Q 004268 585 IYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILL---NSNLEAFVADFGLAR 661 (764)
Q Consensus 585 v~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll---~~~~~~kl~Dfg~~~ 661 (764)
||||+++++|.+++.. ...+++..+..++.|++.||+||| ++||+||||||+||++ +.++.+||+|||.+.
T Consensus 84 v~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~ 157 (304)
T 2jam_A 84 VMQLVSGGELFDRILE---RGVYTEKDASLVIQQVLSAVKYLH---ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSK 157 (304)
T ss_dssp EECCCCSCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTC
T ss_pred EEEcCCCccHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEecCCCCCCEEEccCCcce
Confidence 9999999999999863 345889999999999999999999 8899999999999999 788999999999997
Q ss_pred ccCCCCCCceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCccccccccc-------CCcCCCCCCCc
Q 004268 662 LLHPDSSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSSSS-------GRKISQNPRLD 734 (764)
Q Consensus 662 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~~~-------~~~~~~~~~~~ 734 (764)
.... .......|++.|+|||++.+..++.++||||+|+++|+|++|+.||.......... .......+.++
T Consensus 158 ~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 235 (304)
T 2jam_A 158 MEQN--GIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDIS 235 (304)
T ss_dssp CCCC--BTTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHCCCCCCTTTTTTSC
T ss_pred ecCC--CccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCccccccCC
Confidence 5432 22334578999999999999999999999999999999999999998655422110 11112235678
Q ss_pred HHHHHHHhhhhccc
Q 004268 735 LQCNAYLKNFSQGN 748 (764)
Q Consensus 735 ~~~~~~~~~~l~~~ 748 (764)
..+.+++.+|++.+
T Consensus 236 ~~~~~li~~~l~~d 249 (304)
T 2jam_A 236 ESAKDFICHLLEKD 249 (304)
T ss_dssp HHHHHHHHHHHCSS
T ss_pred HHHHHHHHHHcCCC
Confidence 89999999999877
No 173
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=4.7e-36 Score=308.71 Aligned_cols=235 Identities=21% Similarity=0.345 Sum_probs=194.4
Q ss_pred hhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcH---HHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEE
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEP---AFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCM 582 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~---~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 582 (764)
.++|++.+.||+|+||+||+|... +++.||+|++........ ...+.+.+|++++++++||||+++++++.+....
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 83 (283)
T 3bhy_A 4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDV 83 (283)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeE
Confidence 468999999999999999999876 799999999876543211 1247788999999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCC----CEEEeeec
Q 004268 583 FLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNL----EAFVADFG 658 (764)
Q Consensus 583 ~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~----~~kl~Dfg 658 (764)
++||||+++++|.+++.. ...+++..+..++.|++.||+||| ++||+||||||+||+++.++ .+||+|||
T Consensus 84 ~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg 157 (283)
T 3bhy_A 84 VLILELVSGGELFDFLAE---KESLTEDEATQFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFG 157 (283)
T ss_dssp EEEEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSSSSCCEEECCCT
T ss_pred EEEEeecCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCChHHEEEecCCCCCCceEEEecc
Confidence 999999999999999973 346899999999999999999999 88999999999999998877 89999999
Q ss_pred cccccCCCCCCceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCccccccccc---CCc----CCCCC
Q 004268 659 LARLLHPDSSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSSSS---GRK----ISQNP 731 (764)
Q Consensus 659 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~~~---~~~----~~~~~ 731 (764)
.+....... ......+++.|+|||++.+..++.++||||+|+++|+|++|+.||.+........ ... ....+
T Consensus 158 ~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (283)
T 3bhy_A 158 IAHKIEAGN-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFS 236 (283)
T ss_dssp TCEECC---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCHHHHT
T ss_pred cceeccCCC-cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhHhcccCCcchhcc
Confidence 998765332 2234568999999999999999999999999999999999999998765422111 111 11124
Q ss_pred CCcHHHHHHHhhhhccc
Q 004268 732 RLDLQCNAYLKNFSQGN 748 (764)
Q Consensus 732 ~~~~~~~~~~~~~l~~~ 748 (764)
..+..+.+++++|++.+
T Consensus 237 ~~~~~~~~li~~~l~~d 253 (283)
T 3bhy_A 237 NTSELAKDFIRRLLVKD 253 (283)
T ss_dssp TCCHHHHHHHHTTSCSS
T ss_pred cCCHHHHHHHHHHccCC
Confidence 56788999999999887
No 174
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=9.3e-36 Score=310.37 Aligned_cols=218 Identities=34% Similarity=0.575 Sum_probs=187.8
Q ss_pred CccCHHHHHHHhhcCCcc------eeeeecCceeEEEEEECCCCEEEEEEccCCCC-CcHHHHHHHHHHHHHHHhcCCCc
Q 004268 496 GRITFEEMIEATEDFHIK------YCIGTGGYGSVYRAQLSSGKLVALKKLHRSET-EEPAFLESFQTEARLLSQIRHRN 568 (764)
Q Consensus 496 ~~~~~~~~~~~~~~y~~~------~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~E~~~l~~l~hpn 568 (764)
..+++.++......|... +.||+|+||+||+|.. +++.||+|++..... ......+.+.+|++++++++|||
T Consensus 13 ~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 91 (307)
T 2nru_A 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHEN 91 (307)
T ss_dssp EECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTT
T ss_pred CcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCC
Confidence 356788888888887766 8999999999999987 488999999876432 22334578899999999999999
Q ss_pred eeeEeeEEeeCCEEEEEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecC
Q 004268 569 IVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNS 648 (764)
Q Consensus 569 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~ 648 (764)
|+++++++.+.+..++||||+++++|.+++........+++..+..++.|++.||+||| ++||+||||||+||+++.
T Consensus 92 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dlkp~Nili~~ 168 (307)
T 2nru_A 92 LVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDE 168 (307)
T ss_dssp BCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECT
T ss_pred eEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecCCCCHHHEEEcC
Confidence 99999999999999999999999999999976544556899999999999999999999 889999999999999999
Q ss_pred CCCEEEeeeccccccCCCCCC--ceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccc
Q 004268 649 NLEAFVADFGLARLLHPDSSN--RTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSS 718 (764)
Q Consensus 649 ~~~~kl~Dfg~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~ 718 (764)
++.+||+|||.+......... .....|++.|+|||++.+ .++.++||||+|+++|+|++|+.||.....
T Consensus 169 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~ 239 (307)
T 2nru_A 169 AFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHRE 239 (307)
T ss_dssp TCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBS
T ss_pred CCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcc
Confidence 999999999999876533222 223468999999998875 488999999999999999999999987554
No 175
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=3.4e-36 Score=331.48 Aligned_cols=203 Identities=28% Similarity=0.383 Sum_probs=160.1
Q ss_pred hhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeC-----C
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHN-----K 580 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~-----~ 580 (764)
.++|++.+.||+|+||+||+|.+. +++.||||++..... .....+++.+|++++++++||||+++++++... .
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 130 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFE-DLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFD 130 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTS-SHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhc-CHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCc
Confidence 478999999999999999999755 799999999976433 344457889999999999999999999998543 5
Q ss_pred EEEEEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeeccc
Q 004268 581 CMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLA 660 (764)
Q Consensus 581 ~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~ 660 (764)
..|+||||++ ++|.+++.. ...+++..++.++.||+.||+||| ++||+||||||+|||++.++.+||+|||++
T Consensus 131 ~~~lv~e~~~-~~L~~~~~~---~~~l~~~~~~~~~~qi~~aL~~LH---~~~iiHrDlKp~NILl~~~~~~kl~DFGla 203 (458)
T 3rp9_A 131 ELYVVLEIAD-SDFKKLFRT---PVYLTELHIKTLLYNLLVGVKYVH---SAGILHRDLKPANCLVNQDCSVKVCDFGLA 203 (458)
T ss_dssp CEEEEECCCS-EEHHHHHHS---SCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTCCEEECCCTTC
T ss_pred eEEEEEeccc-cchhhhccc---CCCCCHHHHHHHHHHHHHHHHHHH---hCCcCCCCCChhhEEECCCCCEeecccccc
Confidence 6999999985 689999873 456899999999999999999999 899999999999999999999999999999
Q ss_pred cccCCCCC---------------------------Cceeccccccccccccc-ccCCCCccchHHHHHHHHHHHHh----
Q 004268 661 RLLHPDSS---------------------------NRTLVVGTYGYIAPELA-YTMAVTEKCDVYSFGVVALEVLM---- 708 (764)
Q Consensus 661 ~~~~~~~~---------------------------~~~~~~g~~~y~aPE~~-~~~~~~~~~DiwslG~il~~llt---- 708 (764)
+....... .....+||+.|+|||++ .+..++.++||||+||++|||++
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~ 283 (458)
T 3rp9_A 204 RTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKE 283 (458)
T ss_dssp BCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTT
T ss_pred hhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhccc
Confidence 87643211 12345789999999976 56679999999999999999999
Q ss_pred -------CCCCCCccc
Q 004268 709 -------GSHPTDLLS 717 (764)
Q Consensus 709 -------g~~Pf~~~~ 717 (764)
|++||.+.+
T Consensus 284 ~~~~~~~~~p~f~g~~ 299 (458)
T 3rp9_A 284 NVAYHADRGPLFPGSS 299 (458)
T ss_dssp TCSSGGGCCCSCC---
T ss_pred cccccccccccCCCCc
Confidence 677776543
No 176
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=3e-36 Score=316.51 Aligned_cols=236 Identities=24% Similarity=0.415 Sum_probs=189.4
Q ss_pred hhcCCcceeeeecCceeEEEEEEC-CCCE----EEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCE
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLS-SGKL----VALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKC 581 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~-~~~~----vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~ 581 (764)
.++|++.+.||+|+||+||+|.+. +++. ||+|.+...... ...+.+.+|++++++++||||+++++++.+..
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~- 90 (327)
T 3poz_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSP--KANKEILDEAYVMASVDNPHVCRLLGICLTST- 90 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC---------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-
T ss_pred HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCH--HHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-
Confidence 478999999999999999999854 4543 588887644322 22478899999999999999999999998765
Q ss_pred EEEEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeecccc
Q 004268 582 MFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLAR 661 (764)
Q Consensus 582 ~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~ 661 (764)
.++|+||+++|+|.+++... ...+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+++
T Consensus 91 ~~~v~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~ 165 (327)
T 3poz_A 91 VQLITQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAK 165 (327)
T ss_dssp EEEEEECCTTCBHHHHHHHS--TTSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCTTHHH
T ss_pred eEEEEEecCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCChheEEECCCCCEEEccCccee
Confidence 77899999999999999753 346899999999999999999999 8899999999999999999999999999998
Q ss_pred ccCCCCCC--ceecccccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccccccc----cCCcCCCCCCCc
Q 004268 662 LLHPDSSN--RTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLM-GSHPTDLLSSLSSS----SGRKISQNPRLD 734 (764)
Q Consensus 662 ~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~llt-g~~Pf~~~~~~~~~----~~~~~~~~~~~~ 734 (764)
........ .....+|+.|+|||++.+..++.++||||+||++|+|+| |+.||.+....... .......++..+
T Consensus 166 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (327)
T 3poz_A 166 LLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICT 245 (327)
T ss_dssp HHTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCTTBC
T ss_pred EccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHHHcCCCCCCCccCC
Confidence 76543322 223456789999999999999999999999999999999 99999876553321 122334456678
Q ss_pred HHHHHHHhhhhccchh
Q 004268 735 LQCNAYLKNFSQGNHR 750 (764)
Q Consensus 735 ~~~~~~~~~~l~~~~~ 750 (764)
..+.+++..|++.++.
T Consensus 246 ~~~~~li~~~l~~~p~ 261 (327)
T 3poz_A 246 IDVYMIMVKCWMIDAD 261 (327)
T ss_dssp HHHHHHHHHHTCSCGG
T ss_pred HHHHHHHHHHcCCChh
Confidence 8999999999998843
No 177
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=2.4e-36 Score=336.35 Aligned_cols=235 Identities=29% Similarity=0.444 Sum_probs=193.6
Q ss_pred HhhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcH----------HHHHHHHHHHHHHHhcCCCceeeEee
Q 004268 506 ATEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEP----------AFLESFQTEARLLSQIRHRNIVKLYG 574 (764)
Q Consensus 506 ~~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~----------~~~~~~~~E~~~l~~l~hpniv~~~~ 574 (764)
..++|++.+.||+|+||+||+|... +++.||+|++........ ...+.+.+|++++++++||||+++++
T Consensus 34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~ 113 (504)
T 3q5i_A 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD 113 (504)
T ss_dssp GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 4688999999999999999999865 688999999976543211 22467889999999999999999999
Q ss_pred EEeeCCEEEEEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCC---C
Q 004268 575 FCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNL---E 651 (764)
Q Consensus 575 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~---~ 651 (764)
++.+....|+||||+++|+|.+++.. ...+++..+..++.||+.||+||| ++||+||||||+||+++.++ .
T Consensus 114 ~~~~~~~~~lv~e~~~gg~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~ 187 (504)
T 3q5i_A 114 VFEDKKYFYLVTEFYEGGELFEQIIN---RHKFDECDAANIMKQILSGICYLH---KHNIVHRDIKPENILLENKNSLLN 187 (504)
T ss_dssp EEECSSEEEEEEECCTTCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESSTTCCSS
T ss_pred EEEcCCEEEEEEecCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCcHHHEEEecCCCCcc
Confidence 99999999999999999999998863 346899999999999999999999 89999999999999998765 6
Q ss_pred EEEeeeccccccCCCCCCceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccccccccC---C---
Q 004268 652 AFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSSSSG---R--- 725 (764)
Q Consensus 652 ~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~~~~---~--- 725 (764)
+||+|||++....... ......||+.|+|||++.+ .++.++||||+||++|+|++|+.||.+....+.... .
T Consensus 188 ~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~ 265 (504)
T 3q5i_A 188 IKIVDFGLSSFFSKDY-KLRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYY 265 (504)
T ss_dssp EEECCCTTCEECCTTS-CBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCC
T ss_pred EEEEECCCCEEcCCCC-ccccccCCcCCCCHHHhcc-CCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCC
Confidence 9999999998765432 3344679999999999874 689999999999999999999999987665322111 1
Q ss_pred -cCCCCCCCcHHHHHHHhhhhccc
Q 004268 726 -KISQNPRLDLQCNAYLKNFSQGN 748 (764)
Q Consensus 726 -~~~~~~~~~~~~~~~~~~~l~~~ 748 (764)
.....+.++..+.++++.|++.+
T Consensus 266 ~~~~~~~~~s~~~~~li~~~L~~d 289 (504)
T 3q5i_A 266 FDFNDWKNISDEAKELIKLMLTYD 289 (504)
T ss_dssp CCHHHHTTSCHHHHHHHHHHTCSS
T ss_pred CCccccCCCCHHHHHHHHHHcCCC
Confidence 11112567899999999999977
No 178
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-36 Score=322.41 Aligned_cols=238 Identities=24% Similarity=0.329 Sum_probs=187.7
Q ss_pred HHhhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCc--HHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCE
Q 004268 505 EATEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEE--PAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKC 581 (764)
Q Consensus 505 ~~~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~ 581 (764)
...++|++.+.||+|+||.||+|.+. +|+.||+|++....... ....+.+.+|++++++++||||+++++++.+.+.
T Consensus 7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (346)
T 1ua2_A 7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN 86 (346)
T ss_dssp ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTC
T ss_pred HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCc
Confidence 34688999999999999999999865 68999999997543322 1122467899999999999999999999999999
Q ss_pred EEEEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeecccc
Q 004268 582 MFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLAR 661 (764)
Q Consensus 582 ~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~ 661 (764)
.++||||+++ +|..++... ...+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||.++
T Consensus 87 ~~lv~e~~~~-~l~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~ 160 (346)
T 1ua2_A 87 ISLVFDFMET-DLEVIIKDN--SLVLTPSHIKAYMLMTLQGLEYLH---QHWILHRDLKPNNLLLDENGVLKLADFGLAK 160 (346)
T ss_dssp CEEEEECCSE-EHHHHHTTC--CSSCCSSHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECCCGGGS
T ss_pred eEEEEEcCCC-CHHHHHHhc--CcCCCHHHHHHHHHHHHHHHHHHH---HCCEECCCCCHHHEEEcCCCCEEEEecccce
Confidence 9999999986 888888642 345788899999999999999999 8999999999999999999999999999998
Q ss_pred ccCCCCCCceecccccccccccccccC-CCCccchHHHHHHHHHHHHhCCCCCCcccccccccC----------------
Q 004268 662 LLHPDSSNRTLVVGTYGYIAPELAYTM-AVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSSSSG---------------- 724 (764)
Q Consensus 662 ~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~~~~---------------- 724 (764)
.............||+.|+|||++.+. .++.++||||+||++|+|++|.+||.+....+....
T Consensus 161 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 240 (346)
T 1ua2_A 161 SFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDM 240 (346)
T ss_dssp TTTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSST
T ss_pred eccCCcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhh
Confidence 776555445556889999999998764 588999999999999999999999987553211000
Q ss_pred ------CcCC---------CCCCCcHHHHHHHhhhhccc
Q 004268 725 ------RKIS---------QNPRLDLQCNAYLKNFSQGN 748 (764)
Q Consensus 725 ------~~~~---------~~~~~~~~~~~~~~~~l~~~ 748 (764)
.... ..+..+..+.++++.|++.+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d 279 (346)
T 1ua2_A 241 CSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFN 279 (346)
T ss_dssp TSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSS
T ss_pred ccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccC
Confidence 0000 01345678999999999977
No 179
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=3.1e-36 Score=309.55 Aligned_cols=238 Identities=26% Similarity=0.374 Sum_probs=186.6
Q ss_pred hhcCCcceeeeecCceeEEEEEEC----CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEE
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLS----SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCM 582 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 582 (764)
.++|++.+.||+|+||+||+|.+. .+..||+|.+..... ....+.+.+|+.++++++||||+++++++. ++..
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~ 90 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTS--DSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPV 90 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTS--HHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSC
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCC--HHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCcc
Confidence 578999999999999999999764 245799999875432 344578899999999999999999999985 4568
Q ss_pred EEEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeeccccc
Q 004268 583 FLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLARL 662 (764)
Q Consensus 583 ~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~ 662 (764)
++||||+++++|.+++... ...+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||.+..
T Consensus 91 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 165 (281)
T 1mp8_A 91 WIIMELCTLGELRSFLQVR--KYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRY 165 (281)
T ss_dssp EEEEECCTTEEHHHHHHHT--TTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECC------
T ss_pred EEEEecCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHH---hCCeecccccHHHEEECCCCCEEECccccccc
Confidence 8999999999999999743 335889999999999999999999 89999999999999999999999999999987
Q ss_pred cCCCCCC-ceecccccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccccccc----cCCcCCCCCCCcHH
Q 004268 663 LHPDSSN-RTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLM-GSHPTDLLSSLSSS----SGRKISQNPRLDLQ 736 (764)
Q Consensus 663 ~~~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~llt-g~~Pf~~~~~~~~~----~~~~~~~~~~~~~~ 736 (764)
....... .....+++.|+|||++.+..++.++||||+|+++|+|++ |..||.+....+.. .......++..+..
T Consensus 166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 245 (281)
T 1mp8_A 166 MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPT 245 (281)
T ss_dssp -------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCTTCCHH
T ss_pred cCcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHHHcCCCCCCCCCCCHH
Confidence 6433221 223456788999999999999999999999999999997 99999876543321 11223345667889
Q ss_pred HHHHHhhhhccchhhH
Q 004268 737 CNAYLKNFSQGNHRWE 752 (764)
Q Consensus 737 ~~~~~~~~l~~~~~~~ 752 (764)
+.+++++|++.++.-|
T Consensus 246 l~~li~~~l~~~p~~R 261 (281)
T 1mp8_A 246 LYSLMTKCWAYDPSRR 261 (281)
T ss_dssp HHHHHHHHTCSSGGGS
T ss_pred HHHHHHHHccCChhhC
Confidence 9999999998874443
No 180
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=3.3e-36 Score=321.25 Aligned_cols=202 Identities=27% Similarity=0.366 Sum_probs=177.3
Q ss_pred HHHhhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcC-----CCceeeEeeEEe
Q 004268 504 IEATEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIR-----HRNIVKLYGFCL 577 (764)
Q Consensus 504 ~~~~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-----hpniv~~~~~~~ 577 (764)
....++|++.+.||+|+||+||+|++. +++.||+|++... ....+.+..|+++++.++ ||||+++++++.
T Consensus 31 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~ 106 (360)
T 3llt_A 31 MLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI----KKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFM 106 (360)
T ss_dssp CEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC----HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEE
T ss_pred eEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc----hhhhhhhHHHHHHHHHhcccCCCCCCeecccceee
Confidence 345689999999999999999999864 7899999998642 233467788999999996 999999999999
Q ss_pred eCCEEEEEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecC---------
Q 004268 578 HNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNS--------- 648 (764)
Q Consensus 578 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~--------- 648 (764)
..+..++||||+ +++|.+++... ....+++..+..++.||+.||+||| ++||+||||||+||+++.
T Consensus 107 ~~~~~~lv~e~~-~~~L~~~~~~~-~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~~~~~~ 181 (360)
T 3llt_A 107 YYDHMCLIFEPL-GPSLYEIITRN-NYNGFHIEDIKLYCIEILKALNYLR---KMSLTHTDLKPENILLDDPYFEKSLIT 181 (360)
T ss_dssp ETTEEEEEECCC-CCBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCTTCCEEEEE
T ss_pred ECCeeEEEEcCC-CCCHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCcccEEEccccccccccc
Confidence 999999999999 88999999754 2335899999999999999999999 899999999999999975
Q ss_pred ----------------CCCEEEeeeccccccCCCCCCceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCC
Q 004268 649 ----------------NLEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHP 712 (764)
Q Consensus 649 ----------------~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~P 712 (764)
++.+||+|||.+...... .....||+.|+|||++.+..++.++||||+||++|+|++|+.|
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~p 258 (360)
T 3llt_A 182 VRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY---HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLL 258 (360)
T ss_dssp EECTTTCCEEEEEEESCCCEEECCCTTCEETTSC---CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCS
T ss_pred hhcccccccccccccCCCCEEEEeccCceecCCC---CcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCC
Confidence 789999999999865432 2345789999999999999999999999999999999999999
Q ss_pred CCccc
Q 004268 713 TDLLS 717 (764)
Q Consensus 713 f~~~~ 717 (764)
|....
T Consensus 259 f~~~~ 263 (360)
T 3llt_A 259 FRTHE 263 (360)
T ss_dssp CCCSS
T ss_pred CCCCc
Confidence 97654
No 181
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=3.8e-36 Score=314.71 Aligned_cols=233 Identities=21% Similarity=0.340 Sum_probs=186.7
Q ss_pred hhcCCcc-eeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhc-CCCceeeEeeEEeeCCEEE
Q 004268 507 TEDFHIK-YCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQI-RHRNIVKLYGFCLHNKCMF 583 (764)
Q Consensus 507 ~~~y~~~-~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~ 583 (764)
.++|++. +.||+|+||+||+|... +++.||+|++....... .+.+.+|+++++++ +||||+++++++.+.+..+
T Consensus 11 ~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~ 87 (316)
T 2ac3_A 11 EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHI---RSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFY 87 (316)
T ss_dssp TTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCC---HHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEE
T ss_pred ceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchh---HHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEE
Confidence 4778885 78999999999999854 79999999997654332 36788999999995 7999999999999999999
Q ss_pred EEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCC---EEEeeeccc
Q 004268 584 LIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLE---AFVADFGLA 660 (764)
Q Consensus 584 lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~---~kl~Dfg~~ 660 (764)
+||||+++++|.+++.. ...+++..+..++.||+.||+||| ++||+||||||+||+++.++. +||+|||++
T Consensus 88 lv~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~ 161 (316)
T 2ac3_A 88 LVFEKMRGGSILSHIHK---RRHFNELEASVVVQDVASALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFDLG 161 (316)
T ss_dssp EEEECCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEESCSSSSCSEEECCTTCC
T ss_pred EEEEcCCCCcHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHH---hCCceeCCCCHHHEEEccCCCcCceEEEEccCc
Confidence 99999999999999974 346899999999999999999999 889999999999999998766 999999998
Q ss_pred cccCCCCC-------Cceeccccccccccccccc-----CCCCccchHHHHHHHHHHHHhCCCCCCcccccccc------
Q 004268 661 RLLHPDSS-------NRTLVVGTYGYIAPELAYT-----MAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSSS------ 722 (764)
Q Consensus 661 ~~~~~~~~-------~~~~~~g~~~y~aPE~~~~-----~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~~------ 722 (764)
........ ......||+.|+|||++.+ ..++.++||||+||++|+|++|+.||.+....+..
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~ 241 (316)
T 2ac3_A 162 SGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEA 241 (316)
T ss_dssp C-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----C
T ss_pred cccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCccccccccccccccc
Confidence 76542211 1123468999999999875 56889999999999999999999999875432210
Q ss_pred ------------cCCcCCC----CCCCcHHHHHHHhhhhccc
Q 004268 723 ------------SGRKISQ----NPRLDLQCNAYLKNFSQGN 748 (764)
Q Consensus 723 ------------~~~~~~~----~~~~~~~~~~~~~~~l~~~ 748 (764)
....... .+.++..+.+++++|++.+
T Consensus 242 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~d 283 (316)
T 2ac3_A 242 CPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRD 283 (316)
T ss_dssp CHHHHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSS
T ss_pred chhHHHHHHHHHhccCcccCchhcccCCHHHHHHHHHHhhCC
Confidence 0001111 1356788999999999887
No 182
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=1.9e-36 Score=328.51 Aligned_cols=236 Identities=24% Similarity=0.342 Sum_probs=183.3
Q ss_pred HHhhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCC-----cHHHHHHHHHHHHHHHhcCCCceeeEeeEEee
Q 004268 505 EATEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETE-----EPAFLESFQTEARLLSQIRHRNIVKLYGFCLH 578 (764)
Q Consensus 505 ~~~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-----~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~ 578 (764)
...++|.+.+.||+|+||+||+|... +++.||+|++...... .......+.+|++++++++||||+++++++..
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~ 211 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA 211 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec
Confidence 34689999999999999999999764 7899999998754321 11122457899999999999999999999754
Q ss_pred CCEEEEEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCC---CEEEe
Q 004268 579 NKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNL---EAFVA 655 (764)
Q Consensus 579 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~---~~kl~ 655 (764)
+..++||||+++++|.+++.. ...+++..+..++.|++.||+||| ++||+||||||+||+++.++ .+||+
T Consensus 212 -~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlkp~NIll~~~~~~~~~kl~ 284 (419)
T 3i6u_A 212 -EDYYIVLELMEGGELFDKVVG---NKRLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKIT 284 (419)
T ss_dssp -SEEEEEEECCTTCBGGGGTSS---SCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSSSCCEEEC
T ss_pred -CceEEEEEcCCCCcHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEecCCCcceEEEe
Confidence 558999999999999998863 346899999999999999999999 88999999999999997544 59999
Q ss_pred eeccccccCCCCCCceeccccccccccccccc---CCCCccchHHHHHHHHHHHHhCCCCCCccccccccc----CCcCC
Q 004268 656 DFGLARLLHPDSSNRTLVVGTYGYIAPELAYT---MAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSSSS----GRKIS 728 (764)
Q Consensus 656 Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~---~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~~~----~~~~~ 728 (764)
|||+++..... .......||+.|+|||++.+ ..++.++||||+||++|+|++|+.||.......... .....
T Consensus 285 DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~~~~~ 363 (419)
T 3i6u_A 285 DFGHSKILGET-SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYN 363 (419)
T ss_dssp CSSTTTSCC------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHTTCCC
T ss_pred ecccceecCCC-ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhcCCCC
Confidence 99999876533 22344679999999999864 567889999999999999999999998654322111 11111
Q ss_pred ----CCCCCcHHHHHHHhhhhccc
Q 004268 729 ----QNPRLDLQCNAYLKNFSQGN 748 (764)
Q Consensus 729 ----~~~~~~~~~~~~~~~~l~~~ 748 (764)
..+.++..+.+++++|++.+
T Consensus 364 ~~~~~~~~~~~~~~~li~~~L~~d 387 (419)
T 3i6u_A 364 FIPEVWAEVSEKALDLVKKLLVVD 387 (419)
T ss_dssp CCHHHHTTSCHHHHHHHHHHSCSS
T ss_pred CCchhhcccCHHHHHHHHHHccCC
Confidence 12456889999999999877
No 183
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=1.5e-36 Score=333.12 Aligned_cols=238 Identities=24% Similarity=0.425 Sum_probs=198.7
Q ss_pred HhhcCCcceeeeecCceeEEEEEECCCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEEEEE
Q 004268 506 ATEDFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFLI 585 (764)
Q Consensus 506 ~~~~y~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 585 (764)
..++|++.+.||+|+||+||+|.++++..||||++...... .+.+.+|++++++++||||+++++++. .+..++|
T Consensus 186 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~----~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv 260 (454)
T 1qcf_A 186 PRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMS----VEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYII 260 (454)
T ss_dssp CGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTSBC----HHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEE
T ss_pred chHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCCcc----HHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEE
Confidence 35789999999999999999999988899999999765433 378899999999999999999999986 5668999
Q ss_pred EEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeeccccccCC
Q 004268 586 YEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLARLLHP 665 (764)
Q Consensus 586 ~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 665 (764)
|||+++|+|.++++.. ....+++..+..++.||+.||+||| ++||+||||||+||+++.++.+||+|||+++....
T Consensus 261 ~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~ 336 (454)
T 1qcf_A 261 TEFMAKGSLLDFLKSD-EGSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIED 336 (454)
T ss_dssp ECCCTTCBHHHHHHSH-HHHTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCC
T ss_pred EeecCCCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCHHHEEECCCCcEEEeeCCCceEcCC
Confidence 9999999999999743 2335788999999999999999999 88999999999999999999999999999987643
Q ss_pred CCC-CceecccccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccccccc----cCCcCCCCCCCcHHHHH
Q 004268 666 DSS-NRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLM-GSHPTDLLSSLSSS----SGRKISQNPRLDLQCNA 739 (764)
Q Consensus 666 ~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~llt-g~~Pf~~~~~~~~~----~~~~~~~~~~~~~~~~~ 739 (764)
... ......++..|+|||++.+..++.++||||||+++|||+| |+.||.+.+..+.. .......+...+..+.+
T Consensus 337 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~ 416 (454)
T 1qcf_A 337 NEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYN 416 (454)
T ss_dssp HHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTCCCCCCTTSCHHHHH
T ss_pred CceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHH
Confidence 211 1122345778999999998999999999999999999999 99999876543221 12233445567889999
Q ss_pred HHhhhhccchhhH
Q 004268 740 YLKNFSQGNHRWE 752 (764)
Q Consensus 740 ~~~~~l~~~~~~~ 752 (764)
++++||+.++.-|
T Consensus 417 li~~cl~~dp~~R 429 (454)
T 1qcf_A 417 IMMRCWKNRPEER 429 (454)
T ss_dssp HHHHHTCSSGGGS
T ss_pred HHHHHccCChhHC
Confidence 9999999884433
No 184
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=3.5e-36 Score=334.17 Aligned_cols=234 Identities=26% Similarity=0.399 Sum_probs=191.0
Q ss_pred HhhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEEEE
Q 004268 506 ATEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFL 584 (764)
Q Consensus 506 ~~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 584 (764)
..++|++.+.||+|+||+||+|+.. +++.||+|++........ ....+.+|+++++.++||||+++++++.+....|+
T Consensus 35 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 113 (494)
T 3lij_A 35 LSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTS-SNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYL 113 (494)
T ss_dssp HHHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----C-TTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred hhcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCch-HHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence 3578999999999999999999865 789999999876543221 13678899999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecC---CCCEEEeeecccc
Q 004268 585 IYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNS---NLEAFVADFGLAR 661 (764)
Q Consensus 585 v~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~---~~~~kl~Dfg~~~ 661 (764)
||||+++|+|.+++.. ...+++..++.++.||+.||+||| ++||+||||||+||+++. ++.+||+|||++.
T Consensus 114 v~e~~~~g~L~~~~~~---~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~ 187 (494)
T 3lij_A 114 VMECYKGGELFDEIIH---RMKFNEVDAAVIIKQVLSGVTYLH---KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSA 187 (494)
T ss_dssp EEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSTTCCEEECCCTTCE
T ss_pred EEecCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCChhhEEEeCCCCCCcEEEEECCCCe
Confidence 9999999999998863 346899999999999999999999 899999999999999976 4559999999998
Q ss_pred ccCCCCCCceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccccccccC-------CcCCCCCCCc
Q 004268 662 LLHPDSSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSSSSG-------RKISQNPRLD 734 (764)
Q Consensus 662 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~~~~-------~~~~~~~~~~ 734 (764)
...... ......||+.|+|||++. ..++.++||||+||++|+|++|++||.+....+.... ......+.++
T Consensus 188 ~~~~~~-~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s 265 (494)
T 3lij_A 188 VFENQK-KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVS 265 (494)
T ss_dssp ECBTTB-CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCSGGGTTSC
T ss_pred ECCCCc-cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCchhcccCC
Confidence 765432 234467999999999986 4699999999999999999999999987665322111 1112234678
Q ss_pred HHHHHHHhhhhccc
Q 004268 735 LQCNAYLKNFSQGN 748 (764)
Q Consensus 735 ~~~~~~~~~~l~~~ 748 (764)
..+.+++++|++.+
T Consensus 266 ~~~~~li~~~L~~d 279 (494)
T 3lij_A 266 EGAKDLIKQMLQFD 279 (494)
T ss_dssp HHHHHHHHHHTCSS
T ss_pred HHHHHHHHHHCCCC
Confidence 89999999999987
No 185
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=2e-36 Score=314.24 Aligned_cols=236 Identities=25% Similarity=0.355 Sum_probs=192.1
Q ss_pred hhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEEEEE
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFLI 585 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 585 (764)
.++|++.+.||+|+||+||+|+.. +|+.||+|++...... ....+.+.+|++++++++||||+++++++...+..++|
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (299)
T 2r3i_A 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTET-EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLV 80 (299)
T ss_dssp CTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC---------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred cchhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccc-hhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEE
Confidence 368999999999999999999875 7999999998654322 12236778999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeeccccccCC
Q 004268 586 YEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLARLLHP 665 (764)
Q Consensus 586 ~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 665 (764)
|||++ ++|.+++... ....+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||.+.....
T Consensus 81 ~e~~~-~~L~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~ 155 (299)
T 2r3i_A 81 FEFLH-QDLKKFMDAS-ALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV 155 (299)
T ss_dssp EECCS-EEHHHHHHHT-TTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECSTTHHHHHCC
T ss_pred EEccc-CCHHHHHHhh-hccCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHeEEcCCCCEEECcchhhhhccC
Confidence 99998 5999998754 2345889999999999999999999 88999999999999999999999999999987754
Q ss_pred CCCCceecccccccccccccccCC-CCccchHHHHHHHHHHHHhCCCCCCcccccccccC--------------------
Q 004268 666 DSSNRTLVVGTYGYIAPELAYTMA-VTEKCDVYSFGVVALEVLMGSHPTDLLSSLSSSSG-------------------- 724 (764)
Q Consensus 666 ~~~~~~~~~g~~~y~aPE~~~~~~-~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~~~~-------------------- 724 (764)
.........+++.|+|||++.+.. ++.++||||+|+++|+|++|+.||.+....+....
T Consensus 156 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (299)
T 2r3i_A 156 PVRTYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 235 (299)
T ss_dssp CSBCTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGST
T ss_pred CccccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCchhhhhHhhcCc
Confidence 433344457899999999988765 78999999999999999999999987653211000
Q ss_pred ---Cc---------CCCCCCCcHHHHHHHhhhhccc
Q 004268 725 ---RK---------ISQNPRLDLQCNAYLKNFSQGN 748 (764)
Q Consensus 725 ---~~---------~~~~~~~~~~~~~~~~~~l~~~ 748 (764)
.. ....+.++..+.+++++|++.+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d 271 (299)
T 2r3i_A 236 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYD 271 (299)
T ss_dssp TCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSS
T ss_pred ccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcC
Confidence 00 0012456788999999999987
No 186
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=3e-36 Score=307.29 Aligned_cols=236 Identities=25% Similarity=0.391 Sum_probs=198.7
Q ss_pred hhcCCcceeeeecCceeEEEEEECCCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEEEEEE
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFLIY 586 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 586 (764)
.++|++.+.||+|+||.||+|.+.+++.||+|++....... +.+.+|++++++++||||+++++++.+.+..++||
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 82 (267)
T 3t9t_A 7 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE----EDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVT 82 (267)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTBCH----HHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred hhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCCCH----HHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEE
Confidence 47899999999999999999998888999999998765442 67889999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeeccccccCCC
Q 004268 587 EYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLARLLHPD 666 (764)
Q Consensus 587 e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 666 (764)
||+++++|.+++... ...+++..+..++.|++.||+||| ++|++||||||+||+++.++.+||+|||.+......
T Consensus 83 e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~ 157 (267)
T 3t9t_A 83 EFMEHGCLSDYLRTQ--RGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD 157 (267)
T ss_dssp CCCTTCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCH
T ss_pred eCCCCCcHHHHHhhC--cccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCchheEEECCCCCEEEcccccccccccc
Confidence 999999999999743 345889999999999999999999 899999999999999999999999999999865432
Q ss_pred C-CCceecccccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccccccc----cCCcCCCCCCCcHHHHHH
Q 004268 667 S-SNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLM-GSHPTDLLSSLSSS----SGRKISQNPRLDLQCNAY 740 (764)
Q Consensus 667 ~-~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~llt-g~~Pf~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 740 (764)
. .......+++.|+|||++.+..++.++||||+|+++|+|++ |+.||......... .......+...+..+.++
T Consensus 158 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~l 237 (267)
T 3t9t_A 158 QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQI 237 (267)
T ss_dssp HHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTSCHHHHHH
T ss_pred cccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHHHhcCCcCCCCccCcHHHHHH
Confidence 1 11122456788999999998899999999999999999999 99999876542211 112233345568899999
Q ss_pred Hhhhhccchhh
Q 004268 741 LKNFSQGNHRW 751 (764)
Q Consensus 741 ~~~~l~~~~~~ 751 (764)
+++|++.++.-
T Consensus 238 i~~~l~~~p~~ 248 (267)
T 3t9t_A 238 MNHCWRERPED 248 (267)
T ss_dssp HHHHTCSSGGG
T ss_pred HHHHccCChhh
Confidence 99999887443
No 187
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=4.6e-36 Score=313.68 Aligned_cols=240 Identities=26% Similarity=0.380 Sum_probs=199.7
Q ss_pred hhcCCcceeeeecCceeEEEEEE------CCCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhc-CCCceeeEeeEEeeC
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQL------SSGKLVALKKLHRSETEEPAFLESFQTEARLLSQI-RHRNIVKLYGFCLHN 579 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~ 579 (764)
.++|++.+.||+|+||+||+|.+ .+++.||+|++..... ....+.+.+|+++++++ +||||+++++++.+.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 99 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAH--LTEREALMSELKVLSYLGNHMNIVNLLGACTIG 99 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCC--HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchh--HHHHHHHHHHHHHHhhcccCCCeeeEEEEEecC
Confidence 57899999999999999999974 3567899999976543 23357889999999999 999999999999999
Q ss_pred CEEEEEEEecCCCCHHHHHhcCcc---------------ccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCe
Q 004268 580 KCMFLIYEYMERGSLFCVLRNDVE---------------AVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNI 644 (764)
Q Consensus 580 ~~~~lv~e~~~~~~L~~~l~~~~~---------------~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NI 644 (764)
+..++||||+++|+|.+++..... ...+++..+..++.|++.||+||| ++||+||||||+||
T Consensus 100 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Ni 176 (313)
T 1t46_A 100 GPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNI 176 (313)
T ss_dssp SSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGE
T ss_pred CCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCccceE
Confidence 999999999999999999975422 124899999999999999999999 88999999999999
Q ss_pred eecCCCCEEEeeeccccccCCCCCC--ceecccccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCccccccc
Q 004268 645 LLNSNLEAFVADFGLARLLHPDSSN--RTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLM-GSHPTDLLSSLSS 721 (764)
Q Consensus 645 ll~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~llt-g~~Pf~~~~~~~~ 721 (764)
+++.++.+||+|||.+......... .....+++.|+|||++.+..++.++||||+|+++|+|+| |+.||.+......
T Consensus 177 l~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~ 256 (313)
T 1t46_A 177 LLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK 256 (313)
T ss_dssp EEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHH
T ss_pred EEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhH
Confidence 9999999999999999876544322 223456789999999999999999999999999999999 9999987653211
Q ss_pred -----ccCCcCCCCCCCcHHHHHHHhhhhccchhh
Q 004268 722 -----SSGRKISQNPRLDLQCNAYLKNFSQGNHRW 751 (764)
Q Consensus 722 -----~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 751 (764)
............+..+.++++.|++.++.-
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~ 291 (313)
T 1t46_A 257 FYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLK 291 (313)
T ss_dssp HHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGG
T ss_pred HHHHhccCCCCCCcccCCHHHHHHHHHHcCCCchh
Confidence 111223334567889999999999987443
No 188
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=5.9e-36 Score=315.55 Aligned_cols=239 Identities=24% Similarity=0.398 Sum_probs=197.7
Q ss_pred hhcCCcceeeeecCceeEEEEEEC--------CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhc-CCCceeeEeeEEe
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLS--------SGKLVALKKLHRSETEEPAFLESFQTEARLLSQI-RHRNIVKLYGFCL 577 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~ 577 (764)
.++|++.+.||+|+||+||+|++. +++.||+|++..... ....+.+.+|+++++++ +||||+++++++.
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~ 111 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDAT--EKDLSDLVSEMEMMKMIGKHKNIINLLGACT 111 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCC--HHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCc--HHHHHHHHHHHHHHHHhhcCCCEeeEEEEEc
Confidence 578999999999999999999763 567899999976543 33457889999999999 8999999999999
Q ss_pred eCCEEEEEEEecCCCCHHHHHhcCcc-------------ccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCe
Q 004268 578 HNKCMFLIYEYMERGSLFCVLRNDVE-------------AVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNI 644 (764)
Q Consensus 578 ~~~~~~lv~e~~~~~~L~~~l~~~~~-------------~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NI 644 (764)
+.+..++||||+++++|.+++..... ...+++..+..++.||+.||+||| ++||+||||||+||
T Consensus 112 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NI 188 (334)
T 2pvf_A 112 QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNV 188 (334)
T ss_dssp SSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGE
T ss_pred cCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCccceE
Confidence 99999999999999999999975432 234889999999999999999999 88999999999999
Q ss_pred eecCCCCEEEeeeccccccCCCCCC--ceecccccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCccccccc
Q 004268 645 LLNSNLEAFVADFGLARLLHPDSSN--RTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLM-GSHPTDLLSSLSS 721 (764)
Q Consensus 645 ll~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~llt-g~~Pf~~~~~~~~ 721 (764)
+++.++.+||+|||.+......... .....+++.|+|||++.+..++.++||||+|+++|+|++ |+.||.+....+.
T Consensus 189 ll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~ 268 (334)
T 2pvf_A 189 LVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 268 (334)
T ss_dssp EECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHH
T ss_pred EEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHH
Confidence 9999999999999999876543221 222456788999999998899999999999999999999 9999987654221
Q ss_pred c----cCCcCCCCCCCcHHHHHHHhhhhccchh
Q 004268 722 S----SGRKISQNPRLDLQCNAYLKNFSQGNHR 750 (764)
Q Consensus 722 ~----~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 750 (764)
. ...........+..+.++++.|++.++.
T Consensus 269 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~ 301 (334)
T 2pvf_A 269 FKLLKEGHRMDKPANCTNELYMMMRDCWHAVPS 301 (334)
T ss_dssp HHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGG
T ss_pred HHHHhcCCCCCCCccCCHHHHHHHHHHccCChh
Confidence 1 1122334556788999999999987743
No 189
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=2.7e-36 Score=309.26 Aligned_cols=235 Identities=24% Similarity=0.395 Sum_probs=189.5
Q ss_pred hhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEEEEE
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFLI 585 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 585 (764)
.++|++.+.||+|+||.||+|.+. +|+.||+|++...........+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV 89 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence 578999999999999999999876 7999999998654322222346788999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeeccccccCC
Q 004268 586 YEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLARLLHP 665 (764)
Q Consensus 586 ~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 665 (764)
|||+++++|.+++.. ...+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||.+.....
T Consensus 90 ~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~ 163 (276)
T 2h6d_A 90 MEYVSGGELFDYICK---HGRVEEMEARRLFQQILSAVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD 163 (276)
T ss_dssp EECCCSCBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHH---HHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC
T ss_pred EeccCCCcHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCChhhEEECCCCCEEEeecccccccCC
Confidence 999999999999974 345889999999999999999999 88999999999999999999999999999987653
Q ss_pred CCCCceecccccccccccccccCCC-CccchHHHHHHHHHHHHhCCCCCCccccccc---ccCCcCCCCCCCcHHHHHHH
Q 004268 666 DSSNRTLVVGTYGYIAPELAYTMAV-TEKCDVYSFGVVALEVLMGSHPTDLLSSLSS---SSGRKISQNPRLDLQCNAYL 741 (764)
Q Consensus 666 ~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~DiwslG~il~~lltg~~Pf~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 741 (764)
.. ......+++.|+|||++.+..+ +.++||||+|+++|+|++|+.||........ ........+..++..+.+++
T Consensus 164 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 242 (276)
T 2h6d_A 164 GE-FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVATLL 242 (276)
T ss_dssp --------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHH
T ss_pred Cc-ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCcccCchhcCHHHHHHH
Confidence 32 2234578999999999988765 6899999999999999999999986543211 11122233455788999999
Q ss_pred hhhhccc
Q 004268 742 KNFSQGN 748 (764)
Q Consensus 742 ~~~l~~~ 748 (764)
++|++.+
T Consensus 243 ~~~l~~~ 249 (276)
T 2h6d_A 243 MHMLQVD 249 (276)
T ss_dssp HHHTCSS
T ss_pred HHHccCC
Confidence 9999987
No 190
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=2.9e-36 Score=312.20 Aligned_cols=238 Identities=25% Similarity=0.387 Sum_probs=192.3
Q ss_pred hhcCCcceeeeecCceeEEEEEE-----CCCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeC--
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQL-----SSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHN-- 579 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~-- 579 (764)
.++|++.+.||+|+||+||+|++ .+++.||+|++.... ....+.+.+|++++++++||||+++++++...
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 85 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGR 85 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCC---HHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHH
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCC---HHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCC
Confidence 57899999999999999999974 368899999987543 33457889999999999999999999998653
Q ss_pred CEEEEEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeecc
Q 004268 580 KCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGL 659 (764)
Q Consensus 580 ~~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~ 659 (764)
...++||||+++++|.+++... ...+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||.
T Consensus 86 ~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~ 160 (295)
T 3ugc_A 86 RNLKLIMEYLPYGSLRDYLQKH--KERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGL 160 (295)
T ss_dssp TSCEEEEECCTTCBHHHHHHHC--GGGCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCCS
T ss_pred CceEEEEEeCCCCCHHHHHHhc--ccccCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHhhEEEcCCCeEEEccCcc
Confidence 4589999999999999999753 335899999999999999999999 89999999999999999999999999999
Q ss_pred ccccCCCCC---CceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccccc----------------
Q 004268 660 ARLLHPDSS---NRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLS---------------- 720 (764)
Q Consensus 660 ~~~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~---------------- 720 (764)
+........ ......++..|+|||++.+..++.++||||+|+++|+|+||..||.......
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (295)
T 3ugc_A 161 TKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 240 (295)
T ss_dssp CC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHH
T ss_pred cccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHH
Confidence 987643322 1223456778999999999999999999999999999999999987543210
Q ss_pred ----cccCCcCCCCCCCcHHHHHHHhhhhccchhhH
Q 004268 721 ----SSSGRKISQNPRLDLQCNAYLKNFSQGNHRWE 752 (764)
Q Consensus 721 ----~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 752 (764)
.........+...+..+.+++++|++.++.-|
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R 276 (295)
T 3ugc_A 241 LIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQR 276 (295)
T ss_dssp HHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGS
T ss_pred HHHHHhccCcCCCCcCcCHHHHHHHHHHcCCChhhC
Confidence 01112333455678899999999998874443
No 191
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=9.9e-37 Score=314.62 Aligned_cols=237 Identities=27% Similarity=0.416 Sum_probs=200.6
Q ss_pred HhhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEEEE
Q 004268 506 ATEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFL 584 (764)
Q Consensus 506 ~~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 584 (764)
..++|++.+.||+|+||+||+|.+. +++.||+|++...... .+.+.+|++++++++||||+++++++.+.+..++
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 86 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 86 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCSTH----HHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEE
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCHHH----HHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEE
Confidence 4678999999999999999999866 5889999998754432 4778899999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeeccccccC
Q 004268 585 IYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLARLLH 664 (764)
Q Consensus 585 v~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~ 664 (764)
||||+++++|.+++... ....+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||.+....
T Consensus 87 v~e~~~~~~L~~~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~ 162 (288)
T 3kfa_A 87 ITEFMTYGNLLDYLREC-NRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT 162 (288)
T ss_dssp EEECCTTEEHHHHHHHC-CTTTSCHHHHHHHHHHHHHHHHHHH---HHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSC
T ss_pred EEEcCCCCcHHHHHHhc-ccCCccHhHHHHHHHHHHHHHHHHH---HCCccCCCCCcceEEEcCCCCEEEccCccceecc
Confidence 99999999999999754 3345899999999999999999999 8899999999999999999999999999998765
Q ss_pred CCCCC-ceecccccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccccccc----cCCcCCCCCCCcHHHH
Q 004268 665 PDSSN-RTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLM-GSHPTDLLSSLSSS----SGRKISQNPRLDLQCN 738 (764)
Q Consensus 665 ~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~llt-g~~Pf~~~~~~~~~----~~~~~~~~~~~~~~~~ 738 (764)
..... .....+++.|+|||++.+..++.++||||+|+++|+|++ |..||......... .......+...+..+.
T Consensus 163 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 242 (288)
T 3kfa_A 163 GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY 242 (288)
T ss_dssp SSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCCTTCCHHHH
T ss_pred CCccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhccCCCCCCCCCCHHHH
Confidence 33321 223456788999999999999999999999999999999 99999876543221 1223344566788999
Q ss_pred HHHhhhhccchh
Q 004268 739 AYLKNFSQGNHR 750 (764)
Q Consensus 739 ~~~~~~l~~~~~ 750 (764)
++++.|++.++.
T Consensus 243 ~li~~~l~~dp~ 254 (288)
T 3kfa_A 243 ELMRACWQWNPS 254 (288)
T ss_dssp HHHHHHTCSSGG
T ss_pred HHHHHHhCCChh
Confidence 999999998733
No 192
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=2.3e-36 Score=313.59 Aligned_cols=231 Identities=19% Similarity=0.249 Sum_probs=193.8
Q ss_pred hhcCCcceeeeecCceeEEEEEE-CCCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhc-CCCceeeEeeEEeeCCEEEE
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQL-SSGKLVALKKLHRSETEEPAFLESFQTEARLLSQI-RHRNIVKLYGFCLHNKCMFL 584 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~l 584 (764)
.++|++.+.||+|+||+||+|.. .+++.||+|++...... +.+.+|+++++.+ +|++++++++++.+....++
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-----~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~l 83 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDA-----PQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVL 83 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTTS-----CCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCcc-----HHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEE
Confidence 46899999999999999999985 57999999998755433 4577899999999 79999999999999999999
Q ss_pred EEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCC-----EEEeeecc
Q 004268 585 IYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLE-----AFVADFGL 659 (764)
Q Consensus 585 v~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~-----~kl~Dfg~ 659 (764)
||||+ +++|.+++... ...+++..+..++.||+.||+||| ++||+||||||+||+++.++. +||+|||.
T Consensus 84 v~e~~-~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~ 157 (298)
T 1csn_A 84 VIDLL-GPSLEDLLDLC--GRKFSVKTVAMAAKQMLARVQSIH---EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGM 157 (298)
T ss_dssp EEECC-CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECCSSSTTTTCEEECCCTT
T ss_pred EEEec-CCCHHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEeccCCCCCCCeEEEEECcc
Confidence 99999 89999999743 335899999999999999999999 999999999999999987766 99999999
Q ss_pred ccccCCCCC-------CceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCccccccccc---------
Q 004268 660 ARLLHPDSS-------NRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSSSS--------- 723 (764)
Q Consensus 660 ~~~~~~~~~-------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~~~--------- 723 (764)
+........ ......||+.|+|||++.+..++.++||||+|+++|+|++|+.||.+........
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~ 237 (298)
T 1csn_A 158 VKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKK 237 (298)
T ss_dssp CEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHH
T ss_pred ccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhc
Confidence 987654322 1234578999999999999999999999999999999999999998754321110
Q ss_pred --CCcCCCCCCCcHHHHHHHhhhhccc
Q 004268 724 --GRKISQNPRLDLQCNAYLKNFSQGN 748 (764)
Q Consensus 724 --~~~~~~~~~~~~~~~~~~~~~l~~~ 748 (764)
.......+.++..+.++++.|++.+
T Consensus 238 ~~~~~~~~~~~~~~~l~~li~~~l~~d 264 (298)
T 1csn_A 238 QSTPLRELCAGFPEEFYKYMHYARNLA 264 (298)
T ss_dssp HHSCHHHHTTTSCHHHHHHHHHHHHCC
T ss_pred cCccHHHHHhhCcHHHHHHHHHHhcCC
Confidence 0011113467889999999999876
No 193
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=6.4e-36 Score=305.62 Aligned_cols=235 Identities=18% Similarity=0.284 Sum_probs=196.9
Q ss_pred hhcCCcceeeeecCceeEEEEEECCCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeC--CEEEE
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHN--KCMFL 584 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~--~~~~l 584 (764)
.++|++.+.||+|+||+||+|+++ ++.||+|++...... ....+.+.+|++++++++||||+++++++.+. +..++
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 86 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWS-TRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTL 86 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCC-HHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEE
T ss_pred HHHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccC-HHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEe
Confidence 578999999999999999999986 889999999876543 33457799999999999999999999999887 77899
Q ss_pred EEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCC--cEEcCCCCCCeeecCCCCEEEeeeccccc
Q 004268 585 IYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPS--IVHRDISSNNILLNSNLEAFVADFGLARL 662 (764)
Q Consensus 585 v~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~--iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~ 662 (764)
||||+++++|.+++... ....+++..+..++.|++.||+||| ++| |+||||||+||+++.++.++++|||++..
T Consensus 87 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~ 162 (271)
T 3kmu_A 87 ITHWMPYGSLYNVLHEG-TNFVVDQSQAVKFALDMARGMAFLH---TLEPLIPRHALNSRSVMIDEDMTARISMADVKFS 162 (271)
T ss_dssp EEECCTTCBHHHHHHSC-SSCCCCHHHHHHHHHHHHHHHHHHT---TSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCT
T ss_pred eecccCCCcHHHHHhhc-ccCCCCHHHHHHHHHHHHHHHHHHh---cCCCceecCCCccceEEEcCCcceeEEeccceee
Confidence 99999999999999853 2335899999999999999999999 888 99999999999999999999999998765
Q ss_pred cCCCCCCceecccccccccccccccCCCCc---cchHHHHHHHHHHHHhCCCCCCcccccccc-----cCCcCCCCCCCc
Q 004268 663 LHPDSSNRTLVVGTYGYIAPELAYTMAVTE---KCDVYSFGVVALEVLMGSHPTDLLSSLSSS-----SGRKISQNPRLD 734 (764)
Q Consensus 663 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~---~~DiwslG~il~~lltg~~Pf~~~~~~~~~-----~~~~~~~~~~~~ 734 (764)
.... ...||+.|+|||++.+..++. ++||||+|+++|+|++|+.||.+....... .......++..+
T Consensus 163 ~~~~-----~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (271)
T 3kmu_A 163 FQSP-----GRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPTIPPGIS 237 (271)
T ss_dssp TSCT-----TCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHHHHSCCCCCCCTTCC
T ss_pred eccc-----CccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHHHhcCCCCCCCCCCC
Confidence 3322 246799999999998765544 799999999999999999999876553221 122233455678
Q ss_pred HHHHHHHhhhhccchhhH
Q 004268 735 LQCNAYLKNFSQGNHRWE 752 (764)
Q Consensus 735 ~~~~~~~~~~l~~~~~~~ 752 (764)
..+.++++.|++.++.-|
T Consensus 238 ~~~~~li~~~l~~~p~~R 255 (271)
T 3kmu_A 238 PHVSKLMKICMNEDPAKR 255 (271)
T ss_dssp HHHHHHHHHHTCSSGGGS
T ss_pred HHHHHHHHHHcCCChhhC
Confidence 899999999998875444
No 194
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.8e-36 Score=321.67 Aligned_cols=240 Identities=26% Similarity=0.382 Sum_probs=194.5
Q ss_pred hhcCCcceeeeecCceeEEEEEE----CCCCEEEEEEccCCCCC-cHHHHHHHHHHHHHHHhc-CCCceeeEeeEEeeCC
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQL----SSGKLVALKKLHRSETE-EPAFLESFQTEARLLSQI-RHRNIVKLYGFCLHNK 580 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~----~~~~~vavK~~~~~~~~-~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~ 580 (764)
.++|++.+.||+|+||+||+|+. .+++.||+|++...... .....+.+.+|+++++++ +||||+++++++...+
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 47899999999999999999986 37899999998753311 111124567899999999 6999999999999999
Q ss_pred EEEEEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeeccc
Q 004268 581 CMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLA 660 (764)
Q Consensus 581 ~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~ 660 (764)
..++||||+++++|.+++.. ...+++..+..++.||+.||+||| ++||+||||||+||+++.++.+||+|||++
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a 206 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQ---RERFTEHEVQIYVGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLS 206 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEESCSSEE
T ss_pred eEEEEeecCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCcEEEeeCCCC
Confidence 99999999999999999974 346899999999999999999999 889999999999999999999999999999
Q ss_pred cccCCCC-CCceeccccccccccccccc--CCCCccchHHHHHHHHHHHHhCCCCCCcccccccc-------cCCcCCCC
Q 004268 661 RLLHPDS-SNRTLVVGTYGYIAPELAYT--MAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSSS-------SGRKISQN 730 (764)
Q Consensus 661 ~~~~~~~-~~~~~~~g~~~y~aPE~~~~--~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~~-------~~~~~~~~ 730 (764)
+...... .......||+.|+|||++.+ ..++.++|||||||++|+|++|+.||......... .......+
T Consensus 207 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 286 (355)
T 1vzo_A 207 KEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYP 286 (355)
T ss_dssp EECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCCCCCC
T ss_pred eecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHhccCCCCC
Confidence 8654322 22234579999999999886 34789999999999999999999999754432111 11223345
Q ss_pred CCCcHHHHHHHhhhhccchhhH
Q 004268 731 PRLDLQCNAYLKNFSQGNHRWE 752 (764)
Q Consensus 731 ~~~~~~~~~~~~~~l~~~~~~~ 752 (764)
+.++..+.+++++|++.++.-|
T Consensus 287 ~~~~~~~~~li~~~L~~dP~~R 308 (355)
T 1vzo_A 287 QEMSALAKDLIQRLLMKDPKKR 308 (355)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGS
T ss_pred cccCHHHHHHHHHHhhhCHHHh
Confidence 5678899999999999884443
No 195
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6.3e-36 Score=318.59 Aligned_cols=230 Identities=27% Similarity=0.355 Sum_probs=187.1
Q ss_pred hhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCC-----
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNK----- 580 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~----- 580 (764)
.++|++.+.||+|+||.||+|.+. +|+.||+|++..... .....+++.+|+++++.++||||+++++++....
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~ 102 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQ-SELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDF 102 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTS-SHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCcccc-CHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccC
Confidence 578999999999999999999864 799999999976543 3445678899999999999999999999997653
Q ss_pred -EEEEEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeecc
Q 004268 581 -CMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGL 659 (764)
Q Consensus 581 -~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~ 659 (764)
.+|+||||+ +++|.++++. ..+++..+..++.||+.||+||| ++||+||||||+||+++.++.+||+|||+
T Consensus 103 ~~~~lv~e~~-~~~L~~~~~~----~~l~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 174 (367)
T 1cm8_A 103 TDFYLVMPFM-GTDLGKLMKH----EKLGEDRIQFLVYQMLKGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGL 174 (367)
T ss_dssp CCCEEEEECC-SEEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred ceEEEEEecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCcCHHHEEEcCCCCEEEEeeec
Confidence 469999999 7899999864 35889999999999999999999 89999999999999999999999999999
Q ss_pred ccccCCCCCCceeccccccccccccccc-CCCCccchHHHHHHHHHHHHhCCCCCCccccccccc---------------
Q 004268 660 ARLLHPDSSNRTLVVGTYGYIAPELAYT-MAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSSSS--------------- 723 (764)
Q Consensus 660 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~~~--------------- 723 (764)
++..... .....+|+.|+|||++.+ ..++.++||||+||++|+|++|+.||.+.+..+...
T Consensus 175 a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~ 251 (367)
T 1cm8_A 175 ARQADSE---MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQ 251 (367)
T ss_dssp CEECCSS---CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHH
T ss_pred ccccccc---cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHH
Confidence 9875432 334578999999999887 678999999999999999999999998755321100
Q ss_pred -------------------CCcCCCCCCCcHHHHHHHhhhhccc
Q 004268 724 -------------------GRKISQNPRLDLQCNAYLKNFSQGN 748 (764)
Q Consensus 724 -------------------~~~~~~~~~~~~~~~~~~~~~l~~~ 748 (764)
.......+..+..+.+++++|++.+
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~d 295 (367)
T 1cm8_A 252 RLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLD 295 (367)
T ss_dssp TCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSS
T ss_pred HhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCC
Confidence 0011123456889999999999987
No 196
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=1e-35 Score=308.20 Aligned_cols=237 Identities=23% Similarity=0.359 Sum_probs=193.3
Q ss_pred hcCCcceeeeecCceeEEEEEE-CCCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEEEEEE
Q 004268 508 EDFHIKYCIGTGGYGSVYRAQL-SSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFLIY 586 (764)
Q Consensus 508 ~~y~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 586 (764)
++|.....||+|+||+||+|.+ .+++.||+|.+..... ...+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 22 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 98 (295)
T 2clq_A 22 DENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDS---RYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFM 98 (295)
T ss_dssp CTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC------HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCch---HHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEE
Confidence 3455566899999999999986 4788999999876543 22477889999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecC-CCCEEEeeeccccccCC
Q 004268 587 EYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNS-NLEAFVADFGLARLLHP 665 (764)
Q Consensus 587 e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~-~~~~kl~Dfg~~~~~~~ 665 (764)
||+++++|.+++.........++..+..++.|++.||+||| ++||+||||||+||+++. ++.+||+|||.+.....
T Consensus 99 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~ 175 (295)
T 2clq_A 99 EQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAG 175 (295)
T ss_dssp ECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC
T ss_pred EeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHH---hCCEEccCCChhhEEEECCCCCEEEeecccccccCC
Confidence 99999999999986544456778899999999999999999 889999999999999987 89999999999987654
Q ss_pred CCCCceecccccccccccccccCC--CCccchHHHHHHHHHHHHhCCCCCCccccccc------ccCCcCCCCCCCcHHH
Q 004268 666 DSSNRTLVVGTYGYIAPELAYTMA--VTEKCDVYSFGVVALEVLMGSHPTDLLSSLSS------SSGRKISQNPRLDLQC 737 (764)
Q Consensus 666 ~~~~~~~~~g~~~y~aPE~~~~~~--~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~------~~~~~~~~~~~~~~~~ 737 (764)
.........|++.|+|||++.+.. ++.++||||+|+++|+|++|+.||........ ........+..++..+
T Consensus 176 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (295)
T 2clq_A 176 INPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEA 255 (295)
T ss_dssp -----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHCCCCCCCTTSCHHH
T ss_pred CCCcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhccccccccccccCCHHH
Confidence 433344567899999999987653 78999999999999999999999976543211 1112223345678899
Q ss_pred HHHHhhhhccchh
Q 004268 738 NAYLKNFSQGNHR 750 (764)
Q Consensus 738 ~~~~~~~l~~~~~ 750 (764)
.+++++|++.++.
T Consensus 256 ~~li~~~l~~dp~ 268 (295)
T 2clq_A 256 KAFILKCFEPDPD 268 (295)
T ss_dssp HHHHHHTTCSSTT
T ss_pred HHHHHHHccCChh
Confidence 9999999998733
No 197
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=2.7e-36 Score=322.85 Aligned_cols=233 Identities=10% Similarity=0.070 Sum_probs=177.7
Q ss_pred hhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhc--CCCceeeEe-------eEE
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQI--RHRNIVKLY-------GFC 576 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l--~hpniv~~~-------~~~ 576 (764)
...|++.+.||+|+||+||+|.+. +|+.||+|++...........+.+.+|+++++.+ +||||++++ +++
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~ 140 (371)
T 3q60_A 61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAV 140 (371)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEE
T ss_pred ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhe
Confidence 356999999999999999999865 7899999999887765666667888886666555 599988855 444
Q ss_pred eeC-----------------CEEEEEEEecCCCCHHHHHhcCccccccCHHHH------HHHHHHHHHHHHHHHhcCCCC
Q 004268 577 LHN-----------------KCMFLIYEYMERGSLFCVLRNDVEAVELDWTKR------VNIVKSMAHALSYLHYDCKPS 633 (764)
Q Consensus 577 ~~~-----------------~~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~------~~i~~qi~~aL~~LH~~~~~~ 633 (764)
... ...|+||||++ ++|.+++.... ..+.+..+ ..++.||+.||+||| ++|
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~--~~~~~~~~~~~~vk~~i~~qi~~aL~~LH---~~~ 214 (371)
T 3q60_A 141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLD--FVYVFRGDEGILALHILTAQLIRLAANLQ---SKG 214 (371)
T ss_dssp EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHH--HSCCCCHHHHHHHHHHHHHHHHHHHHHHH---HTT
T ss_pred ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhc--cccchhhhhhhhhHHHHHHHHHHHHHHHH---HCC
Confidence 332 34899999999 79999997532 12344444 567799999999999 899
Q ss_pred cEEcCCCCCCeeecCCCCEEEeeeccccccCCCCCCceeccccccccccccccc--CCCCccchHHHHHHHHHHHHhCCC
Q 004268 634 IVHRDISSNNILLNSNLEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYT--MAVTEKCDVYSFGVVALEVLMGSH 711 (764)
Q Consensus 634 iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~--~~~~~~~DiwslG~il~~lltg~~ 711 (764)
|+||||||+||+++.++.+||+|||+++.... ......+++.|+|||++.+ ..++.++||||+||++|+|++|+.
T Consensus 215 ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~ 291 (371)
T 3q60_A 215 LVHGHFTPDNLFIMPDGRLMLGDVSALWKVGT---RGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFL 291 (371)
T ss_dssp EEETTCSGGGEEECTTSCEEECCGGGEEETTC---EEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSC
T ss_pred CccCcCCHHHEEECCCCCEEEEecceeeecCC---CccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCC
Confidence 99999999999999999999999999986542 2224567799999999987 689999999999999999999999
Q ss_pred CCCcccccccc------------cCCcCCCCCCCcHHHHHHHhhhhccc
Q 004268 712 PTDLLSSLSSS------------SGRKISQNPRLDLQCNAYLKNFSQGN 748 (764)
Q Consensus 712 Pf~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~l~~~ 748 (764)
||.+....... ........+.++..+.+++++|++.+
T Consensus 292 Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d 340 (371)
T 3q60_A 292 PFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFD 340 (371)
T ss_dssp STTBCCTTCTTCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSS
T ss_pred CCCCcCcccccchhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCC
Confidence 99877432111 01112223467899999999999877
No 198
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=7.1e-36 Score=306.63 Aligned_cols=235 Identities=26% Similarity=0.449 Sum_probs=196.1
Q ss_pred hhcCCcceeeeecCceeEEEEEECCCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEEEEEE
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFLIY 586 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 586 (764)
.++|++.+.||+|+||+||+|...+++.||+|++...... .+.+.+|++++++++||||+++++++.+ +..++||
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~----~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~ 86 (279)
T 1qpc_A 12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS----PDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIIT 86 (279)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSSC----HHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEE
T ss_pred HHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCccc----HHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEEEE
Confidence 5789999999999999999999888889999999765543 2678899999999999999999999874 4589999
Q ss_pred EecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeeccccccCCC
Q 004268 587 EYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLARLLHPD 666 (764)
Q Consensus 587 e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 666 (764)
||+++++|.+++... ....+++..+..++.|++.||+||| ++||+||||||+||++++++.+||+|||.+......
T Consensus 87 e~~~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 162 (279)
T 1qpc_A 87 EYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDN 162 (279)
T ss_dssp ECCTTCBHHHHTTSH-HHHTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSS
T ss_pred ecCCCCCHHHHHhcC-CCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHhhEEEcCCCCEEECCCcccccccCc
Confidence 999999999999742 2235899999999999999999999 899999999999999999999999999999876533
Q ss_pred CCC-ceecccccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccccccc----cCCcCCCCCCCcHHHHHH
Q 004268 667 SSN-RTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLM-GSHPTDLLSSLSSS----SGRKISQNPRLDLQCNAY 740 (764)
Q Consensus 667 ~~~-~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~llt-g~~Pf~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 740 (764)
... .....++..|+|||++.+..++.++||||+|+++|+|++ |+.||.+....+.. ...........+..+.++
T Consensus 163 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 242 (279)
T 1qpc_A 163 EYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQL 242 (279)
T ss_dssp CEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHH
T ss_pred ccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHHHhcccCCCCcccccHHHHHH
Confidence 211 122346778999999998889999999999999999999 99999876542211 112233445678899999
Q ss_pred Hhhhhccchh
Q 004268 741 LKNFSQGNHR 750 (764)
Q Consensus 741 ~~~~l~~~~~ 750 (764)
++.|++.++.
T Consensus 243 i~~~l~~~p~ 252 (279)
T 1qpc_A 243 MRLCWKERPE 252 (279)
T ss_dssp HHHHTCSSGG
T ss_pred HHHHhccChh
Confidence 9999988743
No 199
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=3.2e-36 Score=330.13 Aligned_cols=236 Identities=27% Similarity=0.438 Sum_probs=193.5
Q ss_pred hhcCCcceeeeecCceeEEEEEECCCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEEEEEE
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFLIY 586 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 586 (764)
.++|++.+.||+|+||+||+|.++.+..||+|++...... .+.+.+|++++++++||||+++++++.+ +..++||
T Consensus 183 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~----~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~ 257 (452)
T 1fmk_A 183 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS----PEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT 257 (452)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSSC----HHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEE
T ss_pred hhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCCC----HHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEe
Confidence 5789999999999999999999887888999999865533 2678899999999999999999999876 6689999
Q ss_pred EecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeeccccccCCC
Q 004268 587 EYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLARLLHPD 666 (764)
Q Consensus 587 e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 666 (764)
||+++|+|.+++... ....+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+++.....
T Consensus 258 e~~~~gsL~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 333 (452)
T 1fmk_A 258 EYMSKGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDN 333 (452)
T ss_dssp CCCTTCBHHHHHSHH-HHTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCCTTC-----
T ss_pred hhhcCCCHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChhhEEECCCCCEEECCCccceecCCC
Confidence 999999999999742 2335889999999999999999999 899999999999999999999999999999876432
Q ss_pred CC-CceecccccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccccccc----cCCcCCCCCCCcHHHHHH
Q 004268 667 SS-NRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLM-GSHPTDLLSSLSSS----SGRKISQNPRLDLQCNAY 740 (764)
Q Consensus 667 ~~-~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~llt-g~~Pf~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 740 (764)
.. ......++..|+|||++.+..++.++||||||+++|||++ |+.||.+....+.. .......++..+..+.++
T Consensus 334 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~l 413 (452)
T 1fmk_A 334 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDL 413 (452)
T ss_dssp ---------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTSCHHHHHH
T ss_pred ceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHH
Confidence 21 1223456788999999999999999999999999999999 99999876543221 122334456678899999
Q ss_pred Hhhhhccchhh
Q 004268 741 LKNFSQGNHRW 751 (764)
Q Consensus 741 ~~~~l~~~~~~ 751 (764)
+++||+.++.-
T Consensus 414 i~~cl~~dP~~ 424 (452)
T 1fmk_A 414 MCQCWRKEPEE 424 (452)
T ss_dssp HHHHTCSSGGG
T ss_pred HHHHccCChhh
Confidence 99999988443
No 200
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=2.6e-35 Score=304.20 Aligned_cols=235 Identities=24% Similarity=0.367 Sum_probs=192.5
Q ss_pred hhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEee----CCE
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLH----NKC 581 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~----~~~ 581 (764)
...|++.+.||+|+||+||+|.+. ++..||+|++...... ....+.+.+|+.++++++||||+++++++.. ...
T Consensus 25 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 103 (290)
T 1t4h_A 25 GRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLT-KSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKC 103 (290)
T ss_dssp SCEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSC-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEE
T ss_pred ceeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhC-HHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCce
Confidence 345888999999999999999764 7889999998765543 3345788999999999999999999998875 456
Q ss_pred EEEEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCC--cEEcCCCCCCeeec-CCCCEEEeeec
Q 004268 582 MFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPS--IVHRDISSNNILLN-SNLEAFVADFG 658 (764)
Q Consensus 582 ~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~--iiH~Dlkp~NIll~-~~~~~kl~Dfg 658 (764)
.++||||+++++|.+++.. ...+++..+..++.|++.||+||| ++| |+||||||+||+++ .++.+||+|||
T Consensus 104 ~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH---~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg 177 (290)
T 1t4h_A 104 IVLVTELMTSGTLKTYLKR---FKVMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLG 177 (290)
T ss_dssp EEEEEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCSCCCGGGEEESSTTSCEEECCTT
T ss_pred EEEEEEecCCCCHHHHHHH---ccCCCHHHHHHHHHHHHHHHHHHH---cCCCCEEECCCCHHHEEEECCCCCEEEeeCC
Confidence 8999999999999999973 346889999999999999999999 888 99999999999998 78999999999
Q ss_pred cccccCCCCCCceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccccccccC------CcCCCCCC
Q 004268 659 LARLLHPDSSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSSSSG------RKISQNPR 732 (764)
Q Consensus 659 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~~~~------~~~~~~~~ 732 (764)
.+..... .......|++.|+|||++.+ .++.++||||+|+++|+|++|+.||........... ........
T Consensus 178 ~~~~~~~--~~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (290)
T 1t4h_A 178 LATLKRA--SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKV 254 (290)
T ss_dssp GGGGCCT--TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGC
T ss_pred Ccccccc--cccccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhccCCccccCCC
Confidence 9976533 23345678999999998875 589999999999999999999999986544221111 11112333
Q ss_pred CcHHHHHHHhhhhccchhh
Q 004268 733 LDLQCNAYLKNFSQGNHRW 751 (764)
Q Consensus 733 ~~~~~~~~~~~~l~~~~~~ 751 (764)
.+..+.++++.|++.++.-
T Consensus 255 ~~~~l~~li~~~l~~dp~~ 273 (290)
T 1t4h_A 255 AIPEVKEIIEGCIRQNKDE 273 (290)
T ss_dssp CCHHHHHHHHHHSCSSGGG
T ss_pred CCHHHHHHHHHHccCChhh
Confidence 4678999999999987433
No 201
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=7.8e-35 Score=306.58 Aligned_cols=288 Identities=22% Similarity=0.282 Sum_probs=161.1
Q ss_pred CCcEEEcCCCcCcccCCccccCCCCCCEEEccCCcCcccCCcccCCCCCCCEEecCCCcccccCCccCcCCCCCCEEEcc
Q 004268 44 KLEKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLDLNLSNNILNGSIPLEFGNLKDLDQLRLQ 123 (764)
Q Consensus 44 ~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 123 (764)
+++.++++++.++ .+|..+. ++|++|+|++|.|++..+..|..+++|++|+|++|.++++.+.+|.++++|++|+|+
T Consensus 34 ~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 110 (332)
T 2ft3_A 34 HLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYIS 110 (332)
T ss_dssp ETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECC
T ss_pred cCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECC
Confidence 4666666666666 3443332 456666666666665555566666666666666666666656666666666666666
Q ss_pred CCcCcccCCccccCCCCcCEEecccCcccccCCccccCCCCCCeeecccCCCCC--CCCCccccCCCccEEEecCccCcC
Q 004268 124 GNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNLKSLFLDNNHLSG--PIPSTLYHLNQLATLCLGYNKLVG 201 (764)
Q Consensus 124 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~--~~~~~~~~l~~L~~L~l~~n~i~~ 201 (764)
+|+++.+++..+ ++|++|++++|+++.+.+..|.++++|++|++++|.++. ..+..+..+
T Consensus 111 ~n~l~~l~~~~~---~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l--------------- 172 (332)
T 2ft3_A 111 KNHLVEIPPNLP---SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL--------------- 172 (332)
T ss_dssp SSCCCSCCSSCC---TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC---------------
T ss_pred CCcCCccCcccc---ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC---------------
Confidence 666664433332 556666666666665555556666666666666665542 333333333
Q ss_pred CcccccCCccccceeeccCcccccccCccccCCCCCCEEEccCCcccCCCCcCCcCCCCCCeEEccCCcccCCCCccccC
Q 004268 202 PVTKEVGNMKNLDRLHLNGNNLTGSIPSTIGYLNLLDELHLSHNRLDGPIPPTIGNLTNLIALDLSSNQLSGLLPREVGN 281 (764)
Q Consensus 202 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 281 (764)
+|++|++++|.++++ |..+. ++|++|++++|.+++..+..|..+++|+.|+|++|++++..+..+..
T Consensus 173 ----------~L~~L~l~~n~l~~l-~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~ 239 (332)
T 2ft3_A 173 ----------KLNYLRISEAKLTGI-PKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSF 239 (332)
T ss_dssp ----------CCSCCBCCSSBCSSC-CSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGG
T ss_pred ----------ccCEEECcCCCCCcc-Ccccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhC
Confidence 444444444444432 11111 34555555555555555455555555566666666555555555555
Q ss_pred CCCCCeEeccCccccCCCCCCCCCCCccceEEccCCcCccCCChhhhc------ccccceeeccccccc--cCCchhccc
Q 004268 282 LKYLASLSLNGNILIGPIPPTIGYLTNLTYLNLGYNRLSSSIPPELMN------CSQLLNLVLSHNSLS--GSIPSEIGN 353 (764)
Q Consensus 282 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~------l~~L~~L~ls~N~l~--~~~~~~~~~ 353 (764)
+++|+.|++++|++. .+|..+..+++|++|++++|+++...+..|.. ..+|+.|++++|++. +..|..|..
T Consensus 240 l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~ 318 (332)
T 2ft3_A 240 LPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRC 318 (332)
T ss_dssp CTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTT
T ss_pred CCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCcccccc
Confidence 566666666666555 34444555666666666666666544444433 245666667776665 456666666
Q ss_pred ccccceeeccccc
Q 004268 354 LIFFRQLDLSRNF 366 (764)
Q Consensus 354 l~~L~~L~l~~N~ 366 (764)
+++|+.|++++|+
T Consensus 319 l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 319 VTDRLAIQFGNYK 331 (332)
T ss_dssp BCCSTTEEC----
T ss_pred cchhhhhhccccc
Confidence 7777777776663
No 202
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=1.2e-34 Score=304.85 Aligned_cols=289 Identities=21% Similarity=0.245 Sum_probs=189.1
Q ss_pred CCcEEEcCCCcCcccCCccccCCCCCCEEEccCCcCcccCCcccCCCCCCCEEecCCCcccccCCccCcCCCCCCEEEcc
Q 004268 44 KLEKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLDLNLSNNILNGSIPLEFGNLKDLDQLRLQ 123 (764)
Q Consensus 44 ~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 123 (764)
+++.++++++.++ .+|..+. ++|++|+|++|+|++..+..|..+++|++|+|++|.++++.|..|.++++|++|+|+
T Consensus 32 ~l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 108 (330)
T 1xku_A 32 HLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLS 108 (330)
T ss_dssp ETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CCeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECC
Confidence 4556666666665 3333332 456666666666665555556666666666666666665556666666666666666
Q ss_pred CCcCcccCCccccCCCCcCEEecccCcccccCCccccCCCCCCeeecccCCCCC--CCCCccccCCCccEEEecCccCcC
Q 004268 124 GNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNLKSLFLDNNHLSG--PIPSTLYHLNQLATLCLGYNKLVG 201 (764)
Q Consensus 124 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~--~~~~~~~~l~~L~~L~l~~n~i~~ 201 (764)
+|+++.++...+ ++|++|++++|+++.+.+..|.++++|+.|++++|.++. ..+..+..+++|+.|++++|.+..
T Consensus 109 ~n~l~~l~~~~~---~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~ 185 (330)
T 1xku_A 109 KNQLKELPEKMP---KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT 185 (330)
T ss_dssp SSCCSBCCSSCC---TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS
T ss_pred CCcCCccChhhc---ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcccc
Confidence 666664433222 456666666666665555556666666666666666642 445556666666666666666665
Q ss_pred CcccccCCccccceeeccCcccccccCccccCCCCCCEEEccCCcccCCCCcCCcCCCCCCeEEccCCcccCCCCccccC
Q 004268 202 PVTKEVGNMKNLDRLHLNGNNLTGSIPSTIGYLNLLDELHLSHNRLDGPIPPTIGNLTNLIALDLSSNQLSGLLPREVGN 281 (764)
Q Consensus 202 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 281 (764)
++...+ ++|++|++++|.+++..+..+..+++|+.|+|++|.+++..+..+..+++|+.|+|++|+++ ..|..+..
T Consensus 186 l~~~~~---~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~ 261 (330)
T 1xku_A 186 IPQGLP---PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLAD 261 (330)
T ss_dssp CCSSCC---TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTT
T ss_pred CCcccc---ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhcc
Confidence 443322 66777777777777766777777777777777777777666667777777888888888777 45566777
Q ss_pred CCCCCeEeccCccccCCCCCCCCC------CCccceEEccCCcCcc--CCChhhhcccccceeeccccc
Q 004268 282 LKYLASLSLNGNILIGPIPPTIGY------LTNLTYLNLGYNRLSS--SIPPELMNCSQLLNLVLSHNS 342 (764)
Q Consensus 282 l~~L~~L~l~~n~l~~~~~~~~~~------l~~L~~L~ls~N~l~~--~~~~~~~~l~~L~~L~ls~N~ 342 (764)
+++|+.|++++|++++..+..|.. .+.|+.|++++|.+.. +.|..|..+.+|+.++|++|+
T Consensus 262 l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 262 HKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp CSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC----
T ss_pred CCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCccccccccceeEEEecccC
Confidence 777888888888877766666643 3678899999998864 567788889999999999985
No 203
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.5e-36 Score=325.55 Aligned_cols=204 Identities=26% Similarity=0.408 Sum_probs=176.4
Q ss_pred hhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCC--EEE
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNK--CMF 583 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~--~~~ 583 (764)
.++|++.+.||+|+||+||+|++. +|+.||+|++........ .+.+.+|++++++++||||+++++++...+ ..+
T Consensus 8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~--~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~ 85 (396)
T 4eut_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRP--VDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKV 85 (396)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSC--HHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEE
T ss_pred CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccch--HHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeE
Confidence 468999999999999999999865 699999999976443322 367789999999999999999999998755 789
Q ss_pred EEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeee----cCCCCEEEeeecc
Q 004268 584 LIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILL----NSNLEAFVADFGL 659 (764)
Q Consensus 584 lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll----~~~~~~kl~Dfg~ 659 (764)
+||||+++++|.+++........+++..++.++.||+.||+||| ++||+||||||+||++ +.++.+||+|||.
T Consensus 86 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~ 162 (396)
T 4eut_A 86 LIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGA 162 (396)
T ss_dssp EEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEECTTSCEEEEECCGGG
T ss_pred EEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHH---HCCEEECCcCHHHEEEeecCCCceeEEEecCCC
Confidence 99999999999999986544445899999999999999999999 8999999999999999 7778899999999
Q ss_pred ccccCCCCCCceeccccccccccccccc--------CCCCccchHHHHHHHHHHHHhCCCCCCcc
Q 004268 660 ARLLHPDSSNRTLVVGTYGYIAPELAYT--------MAVTEKCDVYSFGVVALEVLMGSHPTDLL 716 (764)
Q Consensus 660 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~--------~~~~~~~DiwslG~il~~lltg~~Pf~~~ 716 (764)
++...... ......||+.|+|||++.+ ..++.++||||+||++|+|++|+.||...
T Consensus 163 a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~ 226 (396)
T 4eut_A 163 ARELEDDE-QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPF 226 (396)
T ss_dssp CEECCCGG-GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECT
T ss_pred ceEccCCC-ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCC
Confidence 98765432 2234578999999999865 56788999999999999999999999753
No 204
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=1.5e-36 Score=318.71 Aligned_cols=240 Identities=23% Similarity=0.321 Sum_probs=198.6
Q ss_pred HHhhcCCcceeeeecCceeEEEEEEC------CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEee
Q 004268 505 EATEDFHIKYCIGTGGYGSVYRAQLS------SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLH 578 (764)
Q Consensus 505 ~~~~~y~~~~~ig~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~ 578 (764)
...++|++.+.||+|+||.||+|.+. +++.||+|.+..... ......+.+|++++++++||||+++++++.+
T Consensus 22 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~ 99 (322)
T 1p4o_A 22 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAAS--MRERIEFLNEASVMKEFNCHHVVRLLGVVSQ 99 (322)
T ss_dssp CCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSC--HHHHHHHHHHHHHGGGCCCTTBCCEEEEECS
T ss_pred chhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccC--HHHHHHHHHHHHHHHhcCCCCEeeeEEEEcc
Confidence 35688999999999999999999653 477899999975443 2334678899999999999999999999999
Q ss_pred CCEEEEEEEecCCCCHHHHHhcCcc-------ccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCC
Q 004268 579 NKCMFLIYEYMERGSLFCVLRNDVE-------AVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLE 651 (764)
Q Consensus 579 ~~~~~lv~e~~~~~~L~~~l~~~~~-------~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~ 651 (764)
.+..++||||+++++|.+++..... ...+++..+..++.|++.||+||| ++||+||||||+||+++.++.
T Consensus 100 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~NIli~~~~~ 176 (322)
T 1p4o_A 100 GQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFT 176 (322)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCSGGGEEECTTCC
T ss_pred CCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHH---HCCCccCCCccceEEEcCCCe
Confidence 9999999999999999999874321 135688999999999999999999 889999999999999999999
Q ss_pred EEEeeeccccccCCCCCC--ceecccccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccccccc----cC
Q 004268 652 AFVADFGLARLLHPDSSN--RTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLM-GSHPTDLLSSLSSS----SG 724 (764)
Q Consensus 652 ~kl~Dfg~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~llt-g~~Pf~~~~~~~~~----~~ 724 (764)
+||+|||.+......... .....+++.|+|||++.+..++.++||||+|+++|+|++ |+.||.+....... ..
T Consensus 177 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~ 256 (322)
T 1p4o_A 177 VKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEG 256 (322)
T ss_dssp EEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHTT
T ss_pred EEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHcC
Confidence 999999999765432211 123456889999999999999999999999999999999 89999876543211 11
Q ss_pred CcCCCCCCCcHHHHHHHhhhhccch
Q 004268 725 RKISQNPRLDLQCNAYLKNFSQGNH 749 (764)
Q Consensus 725 ~~~~~~~~~~~~~~~~~~~~l~~~~ 749 (764)
.........+..+.++++.|++.++
T Consensus 257 ~~~~~~~~~~~~l~~li~~~l~~dp 281 (322)
T 1p4o_A 257 GLLDKPDNCPDMLFELMRMCWQYNP 281 (322)
T ss_dssp CCCCCCTTCCHHHHHHHHHHTCSSG
T ss_pred CcCCCCCCCCHHHHHHHHHHcCCCc
Confidence 2233455678899999999999873
No 205
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=3.7e-36 Score=333.12 Aligned_cols=237 Identities=27% Similarity=0.406 Sum_probs=199.6
Q ss_pred hhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEEEEE
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFLI 585 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 585 (764)
..+|++.+.||+|+||.||+|.++ ++..||+|++...... .+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~----~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 294 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 294 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSC----HHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEE
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcccc----hHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEE
Confidence 567999999999999999999876 5889999999765443 36789999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeeccccccCC
Q 004268 586 YEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLARLLHP 665 (764)
Q Consensus 586 ~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 665 (764)
|||+++|+|.++++.. ....+++..+..++.||+.||+||| ++||+||||||+||+++.++.+||+|||+++....
T Consensus 295 ~E~~~~g~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 370 (495)
T 1opk_A 295 TEFMTYGNLLDYLREC-NRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTG 370 (495)
T ss_dssp EECCTTCBHHHHHHHS-CTTTSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGGGCEEECCTTCEECCTT
T ss_pred EEccCCCCHHHHHHhc-CcCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChhhEEECCCCcEEEeecccceeccC
Confidence 9999999999999753 2345889999999999999999999 89999999999999999999999999999987643
Q ss_pred CCCC-ceecccccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccccccc----cCCcCCCCCCCcHHHHH
Q 004268 666 DSSN-RTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLM-GSHPTDLLSSLSSS----SGRKISQNPRLDLQCNA 739 (764)
Q Consensus 666 ~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~llt-g~~Pf~~~~~~~~~----~~~~~~~~~~~~~~~~~ 739 (764)
.... .....++..|+|||++.+..++.++|||||||++|||+| |..||.+.+..... .......+...+..+.+
T Consensus 371 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 450 (495)
T 1opk_A 371 DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYE 450 (495)
T ss_dssp CCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCCTTCCHHHHH
T ss_pred CceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHH
Confidence 2211 122345678999999999899999999999999999999 99999876643221 12233445567889999
Q ss_pred HHhhhhccchhh
Q 004268 740 YLKNFSQGNHRW 751 (764)
Q Consensus 740 ~~~~~l~~~~~~ 751 (764)
+++.||+.++.-
T Consensus 451 li~~cl~~dP~~ 462 (495)
T 1opk_A 451 LMRACWQWNPSD 462 (495)
T ss_dssp HHHHHTCSSGGG
T ss_pred HHHHHcCcChhH
Confidence 999999987443
No 206
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.4e-35 Score=305.63 Aligned_cols=236 Identities=25% Similarity=0.404 Sum_probs=195.6
Q ss_pred hhcCCcce-eeeecCceeEEEEEEC---CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEE
Q 004268 507 TEDFHIKY-CIGTGGYGSVYRAQLS---SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCM 582 (764)
Q Consensus 507 ~~~y~~~~-~ig~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 582 (764)
.++|.+.+ .||+|+||+||+|... +++.||+|++.... .....+.+.+|++++++++||||+++++++ ..+..
T Consensus 8 ~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~ 84 (287)
T 1u59_A 8 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT--EKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEAL 84 (287)
T ss_dssp GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSC--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSE
T ss_pred HHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCcc--chhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCc
Confidence 46677776 8999999999999753 67889999997653 334457899999999999999999999999 45568
Q ss_pred EEEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeeccccc
Q 004268 583 FLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLARL 662 (764)
Q Consensus 583 ~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~ 662 (764)
++||||+++++|.+++.. ....+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||.+..
T Consensus 85 ~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~ 159 (287)
T 1u59_A 85 MLVMEMAGGGPLHKFLVG--KREEIPVSNVAELLHQVSMGMKYLE---EKNFVHRDLAARNVLLVNRHYAKISDFGLSKA 159 (287)
T ss_dssp EEEEECCTTEEHHHHHTT--CTTTSCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred EEEEEeCCCCCHHHHHHh--CCccCCHHHHHHHHHHHHHHHHHHH---HCCEeeCCCchheEEEcCCCCEEECcccceee
Confidence 999999999999999964 2345899999999999999999999 88999999999999999999999999999987
Q ss_pred cCCCCCC---ceecccccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccccccc----cCCcCCCCCCCc
Q 004268 663 LHPDSSN---RTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLM-GSHPTDLLSSLSSS----SGRKISQNPRLD 734 (764)
Q Consensus 663 ~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~llt-g~~Pf~~~~~~~~~----~~~~~~~~~~~~ 734 (764)
....... .....+++.|+|||++.+..++.++||||+|+++|+|++ |+.||......+.. .......++..+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~ 239 (287)
T 1u59_A 160 LGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECP 239 (287)
T ss_dssp CTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTTCCCCCCTTCC
T ss_pred eccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHhcCCcCCCCCCcC
Confidence 6543221 122356789999999998889999999999999999998 99999876543211 112233456678
Q ss_pred HHHHHHHhhhhccchh
Q 004268 735 LQCNAYLKNFSQGNHR 750 (764)
Q Consensus 735 ~~~~~~~~~~l~~~~~ 750 (764)
..+.++++.|++.++.
T Consensus 240 ~~l~~li~~~l~~~p~ 255 (287)
T 1u59_A 240 PELYALMSDCWIYKWE 255 (287)
T ss_dssp HHHHHHHHHTTCSSGG
T ss_pred HHHHHHHHHHcCCChh
Confidence 9999999999987743
No 207
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=8.1e-35 Score=306.44 Aligned_cols=299 Identities=21% Similarity=0.260 Sum_probs=221.7
Q ss_pred cccCCCeeEEEeCCCCccccCCccccCCCCCcEEEcCCCcCcccCCccccCCCCCCEEEccCCcCcccCCcccCCCCCCC
Q 004268 15 FTCFPNLVTFRIWGTLLSGRMPSEIGALSKLEKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTGTIPSEIGSLRDLL 94 (764)
Q Consensus 15 ~~~~~~l~~L~l~~~~~~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~ 94 (764)
+.|..+++.+++++++++ .+|..+. +++++|++++|.++++.+..|.++++|++|+|++|+|++..|.+|..+++|+
T Consensus 29 ~~c~c~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 105 (332)
T 2ft3_A 29 FGCHCHLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQ 105 (332)
T ss_dssp SSCEEETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCC
T ss_pred CCCcccCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCC
Confidence 444457999999999997 6777664 6999999999999988889999999999999999999988899999999999
Q ss_pred EEecCCCcccccCCccCcCCCCCCEEEccCCcCcccCCccccCCCCcCEEecccCcccc--cCCccccCCCCCCeeeccc
Q 004268 95 DLNLSNNILNGSIPLEFGNLKDLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLSLNQLSG--RLPQEVGNLKNLKSLFLDN 172 (764)
Q Consensus 95 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~--~~~~~~~~l~~L~~L~L~~ 172 (764)
+|+|++|.++.+.+..+ ++|++|++++|+++.+.+..|.++++|++|++++|.++. ..+..|..+ +|++|++++
T Consensus 106 ~L~L~~n~l~~l~~~~~---~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~ 181 (332)
T 2ft3_A 106 KLYISKNHLVEIPPNLP---SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISE 181 (332)
T ss_dssp EEECCSSCCCSCCSSCC---TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCS
T ss_pred EEECCCCcCCccCcccc---ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcC
Confidence 99999999995554443 799999999999999988889999999999999999964 678888888 999999999
Q ss_pred CCCCCCCCCccccCCCccEEEecCccCcCCcccccCCccccceeeccCcccccccCccccCCCCCCEEEccCCcccCCCC
Q 004268 173 NHLSGPIPSTLYHLNQLATLCLGYNKLVGPVTKEVGNMKNLDRLHLNGNNLTGSIPSTIGYLNLLDELHLSHNRLDGPIP 252 (764)
Q Consensus 173 n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 252 (764)
|.++.+....+ ++|++|++++|.+..+.+..+..+++|++|++++|.+++..+..+..+++|+.|+|++|.++ .+|
T Consensus 182 n~l~~l~~~~~---~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp 257 (332)
T 2ft3_A 182 AKLTGIPKDLP---ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVP 257 (332)
T ss_dssp SBCSSCCSSSC---SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCC
T ss_pred CCCCccCcccc---CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecC
Confidence 99986543322 56666666666666665556666666666666666666555555555556666666666555 344
Q ss_pred cCCcCCCCCCeEEccCCcccCCCCccccCCCCCCeEeccCccccCCCCCCCCCCCccceEEccCCcCc--cCCChhhhcc
Q 004268 253 PTIGNLTNLIALDLSSNQLSGLLPREVGNLKYLASLSLNGNILIGPIPPTIGYLTNLTYLNLGYNRLS--SSIPPELMNC 330 (764)
Q Consensus 253 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~--~~~~~~~~~l 330 (764)
..+..+++|+.|++++|+++++.+..|.... .....+.|+.|++++|.+. ...|..|..+
T Consensus 258 ~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~------------------~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l 319 (332)
T 2ft3_A 258 AGLPDLKLLQVVYLHTNNITKVGVNDFCPVG------------------FGVKRAYYNGISLFNNPVPYWEVQPATFRCV 319 (332)
T ss_dssp TTGGGCTTCCEEECCSSCCCBCCTTSSSCSS------------------CCSSSCCBSEEECCSSSSCGGGSCGGGGTTB
T ss_pred hhhhcCccCCEEECCCCCCCccChhHccccc------------------cccccccccceEeecCcccccccCccccccc
Confidence 4455555555555555555544444333211 0011356777788887776 4666777778
Q ss_pred cccceeeccccc
Q 004268 331 SQLLNLVLSHNS 342 (764)
Q Consensus 331 ~~L~~L~ls~N~ 342 (764)
++|+.|++++|+
T Consensus 320 ~~L~~l~l~~n~ 331 (332)
T 2ft3_A 320 TDRLAIQFGNYK 331 (332)
T ss_dssp CCSTTEEC----
T ss_pred chhhhhhccccc
Confidence 888888887774
No 208
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=3.3e-36 Score=323.98 Aligned_cols=231 Identities=23% Similarity=0.310 Sum_probs=185.2
Q ss_pred hhcCCcceeeeecCceeEEEEEECCCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCC------
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNK------ 580 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~------ 580 (764)
..+|++.+.||+|+||+||+|++..+..||+|++...... ..+|+++++.++||||+++++++...+
T Consensus 39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~-------~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~ 111 (394)
T 4e7w_A 39 EIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRF-------KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEV 111 (394)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTS-------CCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCE
T ss_pred cceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcch-------HHHHHHHHHhCCCCCcceEEEEEEecCCCCCce
Confidence 4679999999999999999999877777999988654432 236999999999999999999985533
Q ss_pred EEEEEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeec-CCCCEEEeeecc
Q 004268 581 CMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLN-SNLEAFVADFGL 659 (764)
Q Consensus 581 ~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~-~~~~~kl~Dfg~ 659 (764)
..++||||++++.+............+++..++.++.||+.||+||| ++||+||||||+||+++ .++.+||+|||+
T Consensus 112 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~~kL~DFG~ 188 (394)
T 4e7w_A 112 FLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIH---SIGICHRDIKPQNLLLDPPSGVLKLIDFGS 188 (394)
T ss_dssp EEEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCTT
T ss_pred EEEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHEEEcCCCCcEEEeeCCC
Confidence 38899999987544443322223456899999999999999999999 89999999999999999 799999999999
Q ss_pred ccccCCCCCCceecccccccccccccccC-CCCccchHHHHHHHHHHHHhCCCCCCcccccccccC--------------
Q 004268 660 ARLLHPDSSNRTLVVGTYGYIAPELAYTM-AVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSSSSG-------------- 724 (764)
Q Consensus 660 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~~~~-------------- 724 (764)
++....... .....||+.|+|||++.+. .++.++||||+||++|+|++|+.||.+.+..+....
T Consensus 189 a~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~ 267 (394)
T 4e7w_A 189 AKILIAGEP-NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIK 267 (394)
T ss_dssp CEECCTTCC-CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHH
T ss_pred cccccCCCC-CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence 987643332 3345789999999998765 589999999999999999999999987653211000
Q ss_pred --------Cc----------CCCCCCCcHHHHHHHhhhhccc
Q 004268 725 --------RK----------ISQNPRLDLQCNAYLKNFSQGN 748 (764)
Q Consensus 725 --------~~----------~~~~~~~~~~~~~~~~~~l~~~ 748 (764)
.. ....+..+..+.+++++|++.+
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d 309 (394)
T 4e7w_A 268 TMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYT 309 (394)
T ss_dssp HHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSS
T ss_pred hhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCC
Confidence 00 0113347789999999999988
No 209
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=5.4e-36 Score=311.41 Aligned_cols=236 Identities=25% Similarity=0.403 Sum_probs=190.6
Q ss_pred HhhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEEEE
Q 004268 506 ATEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFL 584 (764)
Q Consensus 506 ~~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 584 (764)
..++|++.+.||+|+||+||+|.+. +++.||+|++....... .+.+.+|+++++.++||||+++++++...+..++
T Consensus 17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 93 (302)
T 2j7t_A 17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEE---LEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWI 93 (302)
T ss_dssp GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CC---HHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEE
T ss_pred CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHH---HHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEE
Confidence 4688999999999999999999876 68999999987654332 3678899999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeeccccccC
Q 004268 585 IYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLARLLH 664 (764)
Q Consensus 585 v~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~ 664 (764)
||||+++++|.+++... ...+++..+..++.|++.||.||| ++|++||||||+||+++.++.+||+|||.+....
T Consensus 94 v~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 168 (302)
T 2j7t_A 94 MIEFCPGGAVDAIMLEL--DRGLTEPQIQVVCRQMLEALNFLH---SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNL 168 (302)
T ss_dssp EEECCTTEEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHH
T ss_pred EEEeCCCCcHHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHHHEEECCCCCEEEEECCCCcccc
Confidence 99999999999988642 345899999999999999999999 8899999999999999999999999999876432
Q ss_pred CCCCCceeccccccccccccc-----ccCCCCccchHHHHHHHHHHHHhCCCCCCcccccccccC------CcCCCCCCC
Q 004268 665 PDSSNRTLVVGTYGYIAPELA-----YTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSSSSG------RKISQNPRL 733 (764)
Q Consensus 665 ~~~~~~~~~~g~~~y~aPE~~-----~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~~~~------~~~~~~~~~ 733 (764)
..........|++.|+|||++ .+..++.++||||+|+++|+|++|+.||........... .........
T Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (302)
T 2j7t_A 169 KTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKW 248 (302)
T ss_dssp HHHHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSSGGGS
T ss_pred ccccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHhccCCcccCCcccc
Confidence 221122335789999999988 466789999999999999999999999987654322111 112223446
Q ss_pred cHHHHHHHhhhhccch
Q 004268 734 DLQCNAYLKNFSQGNH 749 (764)
Q Consensus 734 ~~~~~~~~~~~l~~~~ 749 (764)
+..+.++++.|++.++
T Consensus 249 ~~~l~~li~~~l~~dp 264 (302)
T 2j7t_A 249 SVEFRDFLKIALDKNP 264 (302)
T ss_dssp CHHHHHHHHHHSCSCT
T ss_pred CHHHHHHHHHHcccCh
Confidence 7889999999998873
No 210
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=3.8e-36 Score=320.64 Aligned_cols=201 Identities=28% Similarity=0.404 Sum_probs=177.2
Q ss_pred hhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEEEEE
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFLI 585 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 585 (764)
.++|++.+.||+|+||+||+|.+. +++.||+|++.... .....+.+.+|++++++++||||+++++++.+++..++|
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 109 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI--KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISIC 109 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCC--CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEE
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEecccc--CHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEE
Confidence 468999999999999999999865 78999999987653 234457889999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCC-CcEEcCCCCCCeeecCCCCEEEeeeccccccC
Q 004268 586 YEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKP-SIVHRDISSNNILLNSNLEAFVADFGLARLLH 664 (764)
Q Consensus 586 ~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~-~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~ 664 (764)
|||+++++|.+++.. ...+++..+..++.|++.||+||| ++ ||+||||||+||+++.++.+||+|||.+....
T Consensus 110 ~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~~i~~~l~~lh---~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 183 (360)
T 3eqc_A 110 MEHMDGGSLDQVLKK---AGRIPEQILGKVSIAVIKGLTYLR---EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI 183 (360)
T ss_dssp ECCCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHH---HHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHH
T ss_pred EECCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH---HhCCEEcCCccHHHEEECCCCCEEEEECCCCcccc
Confidence 999999999999974 346889999999999999999999 75 99999999999999999999999999997653
Q ss_pred CCCCCceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCccc
Q 004268 665 PDSSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLS 717 (764)
Q Consensus 665 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~ 717 (764)
.. ......|++.|+|||++.+..++.++||||+|+++|+|++|+.||....
T Consensus 184 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 234 (360)
T 3eqc_A 184 DS--MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPD 234 (360)
T ss_dssp HH--C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCC
T ss_pred cc--cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 22 1233578999999999999999999999999999999999999997644
No 211
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=1.3e-35 Score=315.45 Aligned_cols=205 Identities=26% Similarity=0.430 Sum_probs=173.5
Q ss_pred hhcCCcceeeeecCceeEEEEEE-CCCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEee-------
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQL-SSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLH------- 578 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~------- 578 (764)
.++|++.+.||+|+||+||+|+. .+|+.||+|++....... .....+.+|+++++.++||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 94 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKE-GFPITALREIKILQLLKHENVVNLIEICRTKASPYNR 94 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSS-SSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccc-cchHHHHHHHHHHHhccCCCcccHhheeecccccccc
Confidence 57899999999999999999986 479999999986654332 112567799999999999999999999887
Q ss_pred -CCEEEEEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeee
Q 004268 579 -NKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADF 657 (764)
Q Consensus 579 -~~~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Df 657 (764)
.+..++||||+++ ++...+... ...+++..++.++.|++.||+||| ++||+||||||+||+++.++.+||+||
T Consensus 95 ~~~~~~lv~e~~~~-~l~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~kl~Df 168 (351)
T 3mi9_A 95 CKGSIYLVFDFCEH-DLAGLLSNV--LVKFTLSEIKRVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADF 168 (351)
T ss_dssp --CEEEEEEECCSE-EHHHHHHCT--TSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCC
T ss_pred CCceEEEEEeccCC-CHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCHHHEEEcCCCCEEEccc
Confidence 4468999999986 777777542 345899999999999999999999 899999999999999999999999999
Q ss_pred ccccccCCCC----CCceeccccccccccccccc-CCCCccchHHHHHHHHHHHHhCCCCCCcccc
Q 004268 658 GLARLLHPDS----SNRTLVVGTYGYIAPELAYT-MAVTEKCDVYSFGVVALEVLMGSHPTDLLSS 718 (764)
Q Consensus 658 g~~~~~~~~~----~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~~lltg~~Pf~~~~~ 718 (764)
|.+....... .......||+.|+|||++.+ ..++.++||||+||++|+|++|+.||.+...
T Consensus 169 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~ 234 (351)
T 3mi9_A 169 GLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTE 234 (351)
T ss_dssp TTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred hhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCCh
Confidence 9998764221 22234578999999999876 4579999999999999999999999987553
No 212
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=3.9e-36 Score=315.46 Aligned_cols=235 Identities=23% Similarity=0.373 Sum_probs=189.9
Q ss_pred hhcCCcceeeeecCceeEEEEEEC-CCCE----EEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCE
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLS-SGKL----VALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKC 581 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~-~~~~----vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~ 581 (764)
.++|++.+.||+|+||+||+|.+. +++. ||+|.+........ .+.+.+|+.++++++||||+++++++.+ +.
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~--~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~ 88 (325)
T 3kex_A 12 ETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQS--FQAVTDHMLAIGSLDHAHIVRLLGLCPG-SS 88 (325)
T ss_dssp TTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSC--BCSCCHHHHHHHTCCCTTBCCEEEEECB-SS
T ss_pred HhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHH--HHHHHHHHHHHhcCCCCCcCeEEEEEcC-Cc
Confidence 468999999999999999999864 4543 78888754432221 2456789999999999999999999864 56
Q ss_pred EEEEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeecccc
Q 004268 582 MFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLAR 661 (764)
Q Consensus 582 ~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~ 661 (764)
.++||||+++|+|.+++... ...+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+++
T Consensus 89 ~~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~ 163 (325)
T 3kex_A 89 LQLVTQYLPLGSLLDHVRQH--RGALGPQLLLNWGVQIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVAD 163 (325)
T ss_dssp EEEEEECCTTCBSHHHHHSS--GGGSCTTHHHHHHHHHHHHHHHHH---HTTCCCSCCSSTTEEESSSSCEEECSCSGGG
T ss_pred cEEEEEeCCCCCHHHHHHHc--cccCCHHHHHHHHHHHHHHHHHHH---hCCCCCCccchheEEECCCCeEEECCCCccc
Confidence 88999999999999999753 346888999999999999999999 8899999999999999999999999999998
Q ss_pred ccCCCCC--CceecccccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccccccc----cCCcCCCCCCCc
Q 004268 662 LLHPDSS--NRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLM-GSHPTDLLSSLSSS----SGRKISQNPRLD 734 (764)
Q Consensus 662 ~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~llt-g~~Pf~~~~~~~~~----~~~~~~~~~~~~ 734 (764)
....... ......++..|+|||++.+..++.++||||+|+++|+|++ |+.||.+....... .......+...+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (325)
T 3kex_A 164 LLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQPQICT 243 (325)
T ss_dssp GSCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHHHTTCBCCCCTTBC
T ss_pred ccCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHHHcCCCCCCCCcCc
Confidence 8754332 2234567889999999999999999999999999999999 99999876543221 122333444567
Q ss_pred HHHHHHHhhhhccch
Q 004268 735 LQCNAYLKNFSQGNH 749 (764)
Q Consensus 735 ~~~~~~~~~~l~~~~ 749 (764)
..+.+++++|++.++
T Consensus 244 ~~~~~li~~~l~~dp 258 (325)
T 3kex_A 244 IDVYMVMVKCWMIDE 258 (325)
T ss_dssp TTTTHHHHHHTCSCT
T ss_pred HHHHHHHHHHcCCCh
Confidence 788999999998773
No 213
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=3.4e-35 Score=304.73 Aligned_cols=239 Identities=25% Similarity=0.355 Sum_probs=197.5
Q ss_pred HHhhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCC------cHHHHHHHHHHHHHHHhcC-CCceeeEeeEE
Q 004268 505 EATEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETE------EPAFLESFQTEARLLSQIR-HRNIVKLYGFC 576 (764)
Q Consensus 505 ~~~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~------~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~ 576 (764)
...++|++.+.||+|+||.||+|.+. +|+.||+|++...... .....+.+.+|+++++++. ||||+++++++
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~ 93 (298)
T 1phk_A 14 GFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTY 93 (298)
T ss_dssp -CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred chhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeee
Confidence 45689999999999999999999865 7899999998765421 1233467889999999995 99999999999
Q ss_pred eeCCEEEEEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEee
Q 004268 577 LHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVAD 656 (764)
Q Consensus 577 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~D 656 (764)
...+..++||||+++++|.+++.. ...+++..+..++.|++.||+||| ++|++||||||+||+++.++.+||+|
T Consensus 94 ~~~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~d 167 (298)
T 1phk_A 94 ETNTFFFLVFDLMKKGELFDYLTE---KVTLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTD 167 (298)
T ss_dssp ECSSEEEEEEECCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECC
T ss_pred ccCCeEEEEEeccCCCcHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEEcCCCcEEEec
Confidence 999999999999999999999974 346899999999999999999999 89999999999999999999999999
Q ss_pred eccccccCCCCCCceecccccccccccccc------cCCCCccchHHHHHHHHHHHHhCCCCCCccccccccc-------
Q 004268 657 FGLARLLHPDSSNRTLVVGTYGYIAPELAY------TMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSSSS------- 723 (764)
Q Consensus 657 fg~~~~~~~~~~~~~~~~g~~~y~aPE~~~------~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~~~------- 723 (764)
||.+....... ......+++.|+|||++. ...++.++||||+|+++|+|++|+.||..........
T Consensus 168 fg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~ 246 (298)
T 1phk_A 168 FGFSCQLDPGE-KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNY 246 (298)
T ss_dssp CTTCEECCTTC-CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCC
T ss_pred ccchhhcCCCc-ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHHHhcCCc
Confidence 99998765432 234457899999999875 4567899999999999999999999997655422111
Q ss_pred CCcCCCCCCCcHHHHHHHhhhhccchh
Q 004268 724 GRKISQNPRLDLQCNAYLKNFSQGNHR 750 (764)
Q Consensus 724 ~~~~~~~~~~~~~~~~~~~~~l~~~~~ 750 (764)
.......+.++..+.++++.|++.++.
T Consensus 247 ~~~~~~~~~~~~~l~~li~~~l~~dp~ 273 (298)
T 1phk_A 247 QFGSPEWDDYSDTVKDLVSRFLVVQPQ 273 (298)
T ss_dssp CCCTTTGGGSCHHHHHHHHHHCCSSGG
T ss_pred ccCcccccccCHHHHHHHHHHccCCcc
Confidence 111111234678899999999998743
No 214
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=7e-36 Score=310.56 Aligned_cols=239 Identities=22% Similarity=0.358 Sum_probs=194.0
Q ss_pred hhcCCcceeeeecCceeEEEEEE-----CCCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeC--
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQL-----SSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHN-- 579 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~-- 579 (764)
.++|++.+.||+|+||.||+|++ .+++.||+|++....... ..+.+.+|++++++++||||+++++++.+.
T Consensus 20 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~ 97 (302)
T 4e5w_A 20 KRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGN--HIADLKKEIEILRNLYHENIVKYKGICTEDGG 97 (302)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----C--CHHHHHHHHHHHHTCCCTTBCCEEEEEEC---
T ss_pred hhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccch--hHHHHHHHHHHHHhCCCCCeeeeeeEEecCCC
Confidence 46799999999999999999983 368899999997654332 236788999999999999999999999876
Q ss_pred CEEEEEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeecc
Q 004268 580 KCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGL 659 (764)
Q Consensus 580 ~~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~ 659 (764)
...++||||+++++|.+++... ...+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||.
T Consensus 98 ~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~ 172 (302)
T 4e5w_A 98 NGIKLIMEFLPSGSLKEYLPKN--KNKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGL 172 (302)
T ss_dssp CCEEEEEECCTTCBHHHHHHHH--TTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTT
T ss_pred ceEEEEEEeCCCCcHHHHHHhc--cccCCHHHHHHHHHHHHHHHHHhh---cCCcccCCCchheEEEcCCCCEEECcccc
Confidence 6689999999999999999642 345899999999999999999999 89999999999999999999999999999
Q ss_pred ccccCCCCC---CceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCccccc-----------------
Q 004268 660 ARLLHPDSS---NRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSL----------------- 719 (764)
Q Consensus 660 ~~~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~----------------- 719 (764)
+........ ......++..|+|||++.+..++.++||||+|+++|+|++|..|+......
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 252 (302)
T 4e5w_A 173 TKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRL 252 (302)
T ss_dssp CEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHH
T ss_pred cccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHH
Confidence 987754432 123356788899999999999999999999999999999999986533210
Q ss_pred --ccccCCcCCCCCCCcHHHHHHHhhhhccchhhH
Q 004268 720 --SSSSGRKISQNPRLDLQCNAYLKNFSQGNHRWE 752 (764)
Q Consensus 720 --~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 752 (764)
..........++.++..+.+++++|++.++.-|
T Consensus 253 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R 287 (302)
T 4e5w_A 253 VNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNR 287 (302)
T ss_dssp HHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGS
T ss_pred HHHHhccCCCCCCCCCCHHHHHHHHHHcCCCCCCC
Confidence 001122333456678899999999998774443
No 215
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=2.1e-35 Score=315.32 Aligned_cols=242 Identities=25% Similarity=0.335 Sum_probs=190.1
Q ss_pred HHHHHHHhhcCCcceeeeecCceeEEEEEECCCCEEEEEEccCCCCC--------cHHHHHHHHHHHHHHHhcCCCceee
Q 004268 500 FEEMIEATEDFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETE--------EPAFLESFQTEARLLSQIRHRNIVK 571 (764)
Q Consensus 500 ~~~~~~~~~~y~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~--------~~~~~~~~~~E~~~l~~l~hpniv~ 571 (764)
..++....++|++.+.||+|+||+||+|...+|+.||+|++...... .....+.+.+|++++++++||||++
T Consensus 14 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~ 93 (362)
T 3pg1_A 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILG 93 (362)
T ss_dssp HHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred HHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccc
Confidence 45667778999999999999999999999888999999998654322 2334578899999999999999999
Q ss_pred EeeEEee-----CCEEEEEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeee
Q 004268 572 LYGFCLH-----NKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILL 646 (764)
Q Consensus 572 ~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll 646 (764)
+++++.. ....|+||||++ |++.+++.. ....+++..+..++.||+.||+||| ++||+||||||+||++
T Consensus 94 ~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~ 167 (362)
T 3pg1_A 94 LRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHD--QRIVISPQHIQYFMYHILLGLHVLH---EAGVVHRDLHPGNILL 167 (362)
T ss_dssp CSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHC--TTSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEE
T ss_pred eeeeEEeccCCCcceEEEEEccCC-CCHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHH---HCcCEecCCChHHEEE
Confidence 9999854 346899999998 588888764 3346899999999999999999999 8899999999999999
Q ss_pred cCCCCEEEeeeccccccCCCCCCceeccccccccccccccc-CCCCccchHHHHHHHHHHHHhCCCCCCcccccccc---
Q 004268 647 NSNLEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYT-MAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSSS--- 722 (764)
Q Consensus 647 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~~--- 722 (764)
+.++.+||+|||.+...... .......+++.|+|||++.+ ..++.++||||+||++|+|++|+.||.+.......
T Consensus 168 ~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i 246 (362)
T 3pg1_A 168 ADNNDITICDFNLAREDTAD-ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKI 246 (362)
T ss_dssp CTTCCEEECCTTC----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH
T ss_pred cCCCCEEEEecCcccccccc-cccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 99999999999999755432 22344578999999999877 67899999999999999999999999875421110
Q ss_pred --------------------------------cCCcCCCCCCCcHHHHHHHhhhhccc
Q 004268 723 --------------------------------SGRKISQNPRLDLQCNAYLKNFSQGN 748 (764)
Q Consensus 723 --------------------------------~~~~~~~~~~~~~~~~~~~~~~l~~~ 748 (764)
........+..+..+.+++++|++.+
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d 304 (362)
T 3pg1_A 247 VEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFN 304 (362)
T ss_dssp HHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSS
T ss_pred HHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCC
Confidence 00011123456788999999999988
No 216
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=4.7e-36 Score=322.26 Aligned_cols=232 Identities=24% Similarity=0.319 Sum_probs=186.2
Q ss_pred HHhhcCCcceeeeecCceeEEEEEE-CCCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEee-----
Q 004268 505 EATEDFHIKYCIGTGGYGSVYRAQL-SSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLH----- 578 (764)
Q Consensus 505 ~~~~~y~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~----- 578 (764)
...++|++.+.||+|+||+||+|.+ .+|+.||+|++...... ..+|+++++.++||||+++++++..
T Consensus 4 ~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~-------~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 76 (383)
T 3eb0_A 4 TSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRY-------KNRELDIMKVLDHVNIIKLVDYFYTTGDEE 76 (383)
T ss_dssp --CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTS-------CCHHHHHHTTCCCTTBCCEEEEEEEC----
T ss_pred cccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcch-------HHHHHHHHHHcCCCCccchhheeeecCccc
Confidence 3467899999999999999999976 58999999998755432 2379999999999999999999844
Q ss_pred ---------------------------------CCEEEEEEEecCCCCHHHHHhcC-ccccccCHHHHHHHHHHHHHHHH
Q 004268 579 ---------------------------------NKCMFLIYEYMERGSLFCVLRND-VEAVELDWTKRVNIVKSMAHALS 624 (764)
Q Consensus 579 ---------------------------------~~~~~lv~e~~~~~~L~~~l~~~-~~~~~l~~~~~~~i~~qi~~aL~ 624 (764)
....++||||+++ +|.+.+... .....+++..++.++.||+.||+
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~ 155 (383)
T 3eb0_A 77 PKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVG 155 (383)
T ss_dssp ---------------------------------CCEEEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHH
Confidence 3348999999985 777776532 13456899999999999999999
Q ss_pred HHHhcCCCCcEEcCCCCCCeeec-CCCCEEEeeeccccccCCCCCCceecccccccccccccccC-CCCccchHHHHHHH
Q 004268 625 YLHYDCKPSIVHRDISSNNILLN-SNLEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYTM-AVTEKCDVYSFGVV 702 (764)
Q Consensus 625 ~LH~~~~~~iiH~Dlkp~NIll~-~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~DiwslG~i 702 (764)
||| ++||+||||||+||+++ .++.+||+|||.++...... ......+|+.|+|||++.+. .++.++||||+||+
T Consensus 156 ~LH---~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~i 231 (383)
T 3eb0_A 156 FIH---SLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE-PSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCV 231 (383)
T ss_dssp HHH---TTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS-CCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHH
T ss_pred HHH---HCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC-CCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHH
Confidence 999 99999999999999998 68899999999998765433 23345789999999998875 48999999999999
Q ss_pred HHHHHhCCCCCCcccccccccC--------------------------------CcCCCCCCCcHHHHHHHhhhhccc
Q 004268 703 ALEVLMGSHPTDLLSSLSSSSG--------------------------------RKISQNPRLDLQCNAYLKNFSQGN 748 (764)
Q Consensus 703 l~~lltg~~Pf~~~~~~~~~~~--------------------------------~~~~~~~~~~~~~~~~~~~~l~~~ 748 (764)
+|+|++|+.||.+.+..+.... .....+...+..+.+++++|++.+
T Consensus 232 l~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d 309 (383)
T 3eb0_A 232 FGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYE 309 (383)
T ss_dssp HHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSS
T ss_pred HHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCC
Confidence 9999999999987654221100 000123446788999999999988
No 217
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=4e-34 Score=300.96 Aligned_cols=289 Identities=26% Similarity=0.291 Sum_probs=177.0
Q ss_pred CCCEEEccCCcCcccCCcccCCCCCCCEEecCCCcccccCCccCcCCCCCCEEEccCCcCcccCCccccCCCCcCEEecc
Q 004268 68 RLKVLDLSYNRLTGTIPSEIGSLRDLLDLNLSNNILNGSIPLEFGNLKDLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLS 147 (764)
Q Consensus 68 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 147 (764)
+++.++++++.++ .+|..+. ++|++|+|++|.++++.+..|.++++|++|+|++|.++++.|..|.++++|++|+|+
T Consensus 32 ~l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 108 (330)
T 1xku_A 32 HLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLS 108 (330)
T ss_dssp ETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CCeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECC
Confidence 4666666666666 3444443 466666666666666655566666666666666666666666666666666666666
Q ss_pred cCcccccCCccccCCCCCCeeecccCCCCCCCCCccccCCCccEEEecCccCcC--CcccccCCccccceeeccCccccc
Q 004268 148 LNQLSGRLPQEVGNLKNLKSLFLDNNHLSGPIPSTLYHLNQLATLCLGYNKLVG--PVTKEVGNMKNLDRLHLNGNNLTG 225 (764)
Q Consensus 148 ~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~--~~~~~~~~l~~L~~L~L~~n~l~~ 225 (764)
+|+++.+....+ ++|++|++++|.++.+.+..+..+++|+.|++++|.+.. ..+..+..+++|++|++++|.++.
T Consensus 109 ~n~l~~l~~~~~---~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~ 185 (330)
T 1xku_A 109 KNQLKELPEKMP---KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT 185 (330)
T ss_dssp SSCCSBCCSSCC---TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS
T ss_pred CCcCCccChhhc---ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcccc
Confidence 666664433222 566666666666666555566666666666666666643 344556666666666666666664
Q ss_pred ccCccccCCCCCCEEEccCCcccCCCCcCCcCCCCCCeEEccCCcccCCCCccccCCCCCCeEeccCccccCCCCCCCCC
Q 004268 226 SIPSTIGYLNLLDELHLSHNRLDGPIPPTIGNLTNLIALDLSSNQLSGLLPREVGNLKYLASLSLNGNILIGPIPPTIGY 305 (764)
Q Consensus 226 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 305 (764)
+. ..+. ++|++|++++|.+++..+..|..+++|+.|+|++|.+++..+..+..+++|+.|++++|++. .+|..+..
T Consensus 186 l~-~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~ 261 (330)
T 1xku_A 186 IP-QGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLAD 261 (330)
T ss_dssp CC-SSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTT
T ss_pred CC-cccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhcc
Confidence 32 2221 56666666666666666666666666666666666666655556666666666666666665 44555666
Q ss_pred CCccceEEccCCcCccCCChhhhc------ccccceeecccccccc--CCchhcccccccceeeccccc
Q 004268 306 LTNLTYLNLGYNRLSSSIPPELMN------CSQLLNLVLSHNSLSG--SIPSEIGNLIFFRQLDLSRNF 366 (764)
Q Consensus 306 l~~L~~L~ls~N~l~~~~~~~~~~------l~~L~~L~ls~N~l~~--~~~~~~~~l~~L~~L~l~~N~ 366 (764)
+++|++|++++|+|++..+..|.. ...|+.|++++|++.. ..|..|..+.+|+.++|++|+
T Consensus 262 l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 262 HKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp CSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC----
T ss_pred CCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCccccccccceeEEEecccC
Confidence 666666666666666554444432 2556666666666642 445566666666666666663
No 218
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=1.4e-35 Score=316.94 Aligned_cols=201 Identities=28% Similarity=0.363 Sum_probs=166.7
Q ss_pred hhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCC-----
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNK----- 580 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~----- 580 (764)
.++|++.+.||+|+||+||+|... +++.||+|++..... .....+.+.+|+.+++.++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~ 102 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ-NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 102 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTS-SHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccC-ChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccc
Confidence 578999999999999999999765 788999999976543 3344577889999999999999999999997665
Q ss_pred -EEEEEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeecc
Q 004268 581 -CMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGL 659 (764)
Q Consensus 581 -~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~ 659 (764)
..|+||||+++ +|.+.+.. .+++..+..++.||+.||+||| ++||+||||||+||+++.++.+||+|||.
T Consensus 103 ~~~~lv~e~~~~-~l~~~~~~-----~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 173 (371)
T 2xrw_A 103 QDVYIVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGL 173 (371)
T ss_dssp CEEEEEEECCSE-EHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCCCC
T ss_pred cceEEEEEcCCC-CHHHHHhh-----ccCHHHHHHHHHHHHHHHHHHH---HCCeecccCCHHHEEEcCCCCEEEEEeec
Confidence 78999999985 78887752 3788999999999999999999 88999999999999999999999999999
Q ss_pred ccccCCCCCCceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccc
Q 004268 660 ARLLHPDSSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSS 718 (764)
Q Consensus 660 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~ 718 (764)
++...... ......||+.|+|||++.+..++.++||||+||++|+|++|+.||.+.+.
T Consensus 174 a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~ 231 (371)
T 2xrw_A 174 ARTAGTSF-MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDH 231 (371)
T ss_dssp -----------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred cccccccc-ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCH
Confidence 98764322 23346789999999999999999999999999999999999999987654
No 219
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=3.8e-36 Score=326.24 Aligned_cols=230 Identities=27% Similarity=0.369 Sum_probs=183.5
Q ss_pred hhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeC------
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHN------ 579 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~------ 579 (764)
..+|++.+.||+|+||.||+|++. +|+.||||++...... ..+|++++++++||||+++++++...
T Consensus 53 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~~-------~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~ 125 (420)
T 1j1b_A 53 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF-------KNRELQIMRKLDHCNIVRLRYFFYSSGEKKDE 125 (420)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTTS-------CCHHHHHHHTCCCTTBCCEEEEEEEEETTTTE
T ss_pred cceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccchh-------HHHHHHHHHHcCCCCccceeeEEeccCCCCcc
Confidence 457999999999999999999875 6999999998654322 33799999999999999999988542
Q ss_pred CEEEEEEEecCCCCHHHHHhcC-ccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCC-CCEEEeee
Q 004268 580 KCMFLIYEYMERGSLFCVLRND-VEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSN-LEAFVADF 657 (764)
Q Consensus 580 ~~~~lv~e~~~~~~L~~~l~~~-~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~-~~~kl~Df 657 (764)
...++||||+++ ++...+... .....+++..++.++.||+.||+||| ++||+||||||+||+++.+ +.+||+||
T Consensus 126 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NILl~~~~~~~kl~DF 201 (420)
T 1j1b_A 126 VYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDF 201 (420)
T ss_dssp EEEEEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEEETTTTEEEECCC
T ss_pred eeEEeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChhhEEEeCCCCeEEeccc
Confidence 247799999986 566555421 13456899999999999999999999 9999999999999999955 57899999
Q ss_pred ccccccCCCCCCceecccccccccccccccC-CCCccchHHHHHHHHHHHHhCCCCCCccccccccc-------------
Q 004268 658 GLARLLHPDSSNRTLVVGTYGYIAPELAYTM-AVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSSSS------------- 723 (764)
Q Consensus 658 g~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~~~------------- 723 (764)
|+++....... .....||+.|+|||++.+. .++.++||||+||++|||++|+.||.+.+..+...
T Consensus 202 G~a~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~ 280 (420)
T 1j1b_A 202 GSAKQLVRGEP-NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ 280 (420)
T ss_dssp TTCEECCTTCC-CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHH
T ss_pred hhhhhcccCCC-ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHH
Confidence 99987643332 3345789999999998765 78999999999999999999999998765321100
Q ss_pred ---------CCcCC----------CCCCCcHHHHHHHhhhhccc
Q 004268 724 ---------GRKIS----------QNPRLDLQCNAYLKNFSQGN 748 (764)
Q Consensus 724 ---------~~~~~----------~~~~~~~~~~~~~~~~l~~~ 748 (764)
..... ..+..+..+.+++++|++.+
T Consensus 281 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~d 324 (420)
T 1j1b_A 281 IREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYT 324 (420)
T ss_dssp HHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSS
T ss_pred HHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCC
Confidence 00000 13456789999999999988
No 220
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=4.6e-35 Score=308.45 Aligned_cols=192 Identities=21% Similarity=0.376 Sum_probs=170.3
Q ss_pred hhcCCcceeeeecCceeEEEEEE-CCCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcC-CCceeeEeeEEee--CCEE
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQL-SSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIR-HRNIVKLYGFCLH--NKCM 582 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~--~~~~ 582 (764)
.++|++.+.||+|+||+||+|.+ .+++.||+|++.... .+.+.+|++++++++ ||||+++++++.+ ....
T Consensus 35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~ 108 (330)
T 3nsz_A 35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK------KKKIKREIKILENLRGGPNIITLADIVKDPVSRTP 108 (330)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCC------HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCE
T ss_pred CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccc------hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCce
Confidence 47899999999999999999975 478999999987433 267889999999997 9999999999988 6679
Q ss_pred EEEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCC-CEEEeeecccc
Q 004268 583 FLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNL-EAFVADFGLAR 661 (764)
Q Consensus 583 ~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~-~~kl~Dfg~~~ 661 (764)
++||||+++++|.++++ .+++..++.++.|++.||+||| ++||+||||||+||+++.++ .+||+|||.+.
T Consensus 109 ~lv~e~~~~~~l~~~~~------~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~ 179 (330)
T 3nsz_A 109 ALVFEHVNNTDFKQLYQ------TLTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE 179 (330)
T ss_dssp EEEEECCCCCCHHHHGG------GCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred EEEEeccCchhHHHHHH------hCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEEcCCCCEEEEEeCCCce
Confidence 99999999999999885 3788999999999999999999 89999999999999999776 89999999998
Q ss_pred ccCCCCCCceeccccccccccccccc-CCCCccchHHHHHHHHHHHHhCCCCCC
Q 004268 662 LLHPDSSNRTLVVGTYGYIAPELAYT-MAVTEKCDVYSFGVVALEVLMGSHPTD 714 (764)
Q Consensus 662 ~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~~lltg~~Pf~ 714 (764)
...... ......+++.|+|||++.+ ..++.++||||+||++|+|++|+.||.
T Consensus 180 ~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~ 232 (330)
T 3nsz_A 180 FYHPGQ-EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFF 232 (330)
T ss_dssp ECCTTC-CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSS
T ss_pred EcCCCC-ccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcc
Confidence 765433 2344578999999999887 678999999999999999999999994
No 221
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=9.7e-36 Score=312.26 Aligned_cols=235 Identities=26% Similarity=0.359 Sum_probs=187.6
Q ss_pred HhhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCC-----cHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeC
Q 004268 506 ATEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETE-----EPAFLESFQTEARLLSQIRHRNIVKLYGFCLHN 579 (764)
Q Consensus 506 ~~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-----~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~ 579 (764)
..++|++.+.||+|+||.||+|.+. +++.||+|++...... .......+.+|++++++++||||+++++++...
T Consensus 8 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 87 (322)
T 2ycf_A 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE 87 (322)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS
T ss_pred hhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC
Confidence 4678999999999999999999865 6889999998764321 112234678999999999999999999998776
Q ss_pred CEEEEEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCC---EEEee
Q 004268 580 KCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLE---AFVAD 656 (764)
Q Consensus 580 ~~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~---~kl~D 656 (764)
. .++||||+++++|.+++.. ...+++..+..++.||+.||+||| ++||+||||||+||+++.++. +||+|
T Consensus 88 ~-~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~~~~kl~D 160 (322)
T 2ycf_A 88 D-YYIVLELMEGGELFDKVVG---NKRLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITD 160 (322)
T ss_dssp S-EEEEEECCTTEETHHHHST---TCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSSSCCEEECC
T ss_pred c-eEEEEecCCCCcHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEecCCCCCeEEEcc
Confidence 5 8999999999999999873 346899999999999999999999 899999999999999987654 99999
Q ss_pred eccccccCCCCCCceecccccccccccccc---cCCCCccchHHHHHHHHHHHHhCCCCCCccccccccc----CCcCC-
Q 004268 657 FGLARLLHPDSSNRTLVVGTYGYIAPELAY---TMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSSSS----GRKIS- 728 (764)
Q Consensus 657 fg~~~~~~~~~~~~~~~~g~~~y~aPE~~~---~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~~~----~~~~~- 728 (764)
||.+...... .......|++.|+|||++. +..++.++||||+|+++|+|++|+.||.......... .....
T Consensus 161 fg~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 239 (322)
T 2ycf_A 161 FGHSKILGET-SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNF 239 (322)
T ss_dssp CTTCEECCCC-HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTCCCC
T ss_pred Cccceecccc-cccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhCcccc
Confidence 9999876432 1223457899999999874 5678899999999999999999999998654321111 01111
Q ss_pred ---CCCCCcHHHHHHHhhhhccc
Q 004268 729 ---QNPRLDLQCNAYLKNFSQGN 748 (764)
Q Consensus 729 ---~~~~~~~~~~~~~~~~l~~~ 748 (764)
..+.++..+.+++++|++.+
T Consensus 240 ~~~~~~~~~~~~~~li~~~l~~d 262 (322)
T 2ycf_A 240 IPEVWAEVSEKALDLVKKLLVVD 262 (322)
T ss_dssp CHHHHTTSCHHHHHHHHHHSCSS
T ss_pred CchhhhhcCHHHHHHHHHHcccC
Confidence 12456888999999999877
No 222
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=1e-35 Score=312.25 Aligned_cols=236 Identities=24% Similarity=0.427 Sum_probs=188.5
Q ss_pred hhcCCcceeeeecCceeEEEEEEC-CCCE----EEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCE
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLS-SGKL----VALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKC 581 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~-~~~~----vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~ 581 (764)
.++|++.+.||+|+||+||+|.+. +++. ||+|.+........ .+.+.+|+.++++++||||+++++++....
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~--~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~- 90 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA--NKEILDEAYVMASVDNPHVCRLLGICLTST- 90 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCC--HHHHHHHHHHHTTCCBTTBCCCCEEEESSS-
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHH--HHHHHHHHHHHHhCCCCCeeEEEEEEecCC-
Confidence 478999999999999999999854 4554 57777755443322 377889999999999999999999998765
Q ss_pred EEEEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeecccc
Q 004268 582 MFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLAR 661 (764)
Q Consensus 582 ~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~ 661 (764)
.++|+|++.+|+|.+++... ...+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||.++
T Consensus 91 ~~~v~~~~~~g~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~ 165 (327)
T 3lzb_A 91 VQLITQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAK 165 (327)
T ss_dssp EEEEECCCSSCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCTTC--
T ss_pred ceEEEEecCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHh---hCCCcCCCCCHHHEEEcCCCCEEEccCccee
Confidence 78899999999999999753 345889999999999999999999 8999999999999999999999999999998
Q ss_pred ccCCCCCC--ceecccccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccccccc----cCCcCCCCCCCc
Q 004268 662 LLHPDSSN--RTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLM-GSHPTDLLSSLSSS----SGRKISQNPRLD 734 (764)
Q Consensus 662 ~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~llt-g~~Pf~~~~~~~~~----~~~~~~~~~~~~ 734 (764)
........ .....+++.|+|||++.+..++.++||||+|+++|+|++ |+.||.+....... .......++..+
T Consensus 166 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (327)
T 3lzb_A 166 LLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICT 245 (327)
T ss_dssp --------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCTTBC
T ss_pred EccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCCccCC
Confidence 76433222 223456778999999999999999999999999999999 99999876653321 222344456678
Q ss_pred HHHHHHHhhhhccchh
Q 004268 735 LQCNAYLKNFSQGNHR 750 (764)
Q Consensus 735 ~~~~~~~~~~l~~~~~ 750 (764)
..+.++++.|++.++.
T Consensus 246 ~~l~~li~~~l~~dp~ 261 (327)
T 3lzb_A 246 IDVYMIMRKCWMIDAD 261 (327)
T ss_dssp HHHHHHHHHHTCSSGG
T ss_pred HHHHHHHHHHcCCChh
Confidence 8999999999998743
No 223
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=2.1e-35 Score=308.84 Aligned_cols=235 Identities=23% Similarity=0.376 Sum_probs=194.5
Q ss_pred hcC-CcceeeeecCceeEEEEEEC-----CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEee--C
Q 004268 508 EDF-HIKYCIGTGGYGSVYRAQLS-----SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLH--N 579 (764)
Q Consensus 508 ~~y-~~~~~ig~G~~g~V~~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~--~ 579 (764)
++| ++.+.||+|+||+||+|.+. +++.||+|++.... .....+.+.+|++++++++||||+++++++.+ .
T Consensus 30 ~r~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 107 (318)
T 3lxp_A 30 KRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADA--GPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGA 107 (318)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTC--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTT
T ss_pred HHHHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEecccc--ChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCC
Confidence 455 99999999999999988542 68899999997653 23445789999999999999999999999987 4
Q ss_pred CEEEEEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeecc
Q 004268 580 KCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGL 659 (764)
Q Consensus 580 ~~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~ 659 (764)
...++||||+++++|.+++... .+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||.
T Consensus 108 ~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~i~~~l~~~l~~LH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~ 180 (318)
T 3lxp_A 108 ASLQLVMEYVPLGSLRDYLPRH----SIGLAQLLLFAQQICEGMAYLH---AQHYIHRDLAARNVLLDNDRLVKIGDFGL 180 (318)
T ss_dssp TEEEEEECCCTTCBHHHHGGGS----CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCGGG
T ss_pred ceEEEEEecccCCcHHHHHhhC----CCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCchheEEEcCCCCEEECCccc
Confidence 6799999999999999999643 3889999999999999999999 89999999999999999999999999999
Q ss_pred ccccCCCCCC---ceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCccccc-----------------
Q 004268 660 ARLLHPDSSN---RTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSL----------------- 719 (764)
Q Consensus 660 ~~~~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~----------------- 719 (764)
+......... .....++..|+|||++.+..++.++||||+|+++|+|++|+.||......
T Consensus 181 a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 260 (318)
T 3lxp_A 181 AKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRL 260 (318)
T ss_dssp CEECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHH
T ss_pred cccccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHH
Confidence 9877543321 22345788899999999989999999999999999999999999754321
Q ss_pred --ccccCCcCCCCCCCcHHHHHHHhhhhccchhh
Q 004268 720 --SSSSGRKISQNPRLDLQCNAYLKNFSQGNHRW 751 (764)
Q Consensus 720 --~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 751 (764)
..............+..+.++++.|++.++.-
T Consensus 261 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~ 294 (318)
T 3lxp_A 261 TELLERGERLPRPDKCPAEVYHLMKNCWETEASF 294 (318)
T ss_dssp HHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGG
T ss_pred HHHHhcccCCCCCccccHHHHHHHHHHcCCCccc
Confidence 00112233345567889999999999987443
No 224
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=1.5e-35 Score=311.46 Aligned_cols=237 Identities=25% Similarity=0.426 Sum_probs=192.7
Q ss_pred hhcCCcceeeeecCceeEEEEEEC-CCCEE--EEEEccCCCCCcHHHHHHHHHHHHHHHhc-CCCceeeEeeEEeeCCEE
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLS-SGKLV--ALKKLHRSETEEPAFLESFQTEARLLSQI-RHRNIVKLYGFCLHNKCM 582 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~-~~~~v--avK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~ 582 (764)
.++|++.+.||+|+||.||+|+.. ++..+ |+|.+...... ...+.+.+|+++++++ +||||+++++++.+.+..
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~--~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~ 101 (327)
T 1fvr_A 24 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASK--DDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYL 101 (327)
T ss_dssp GGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC--------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEE
T ss_pred HHHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccch--HHHHHHHHHHHHHHhccCCCchhhhceeeeeCCce
Confidence 478999999999999999999754 56644 99988653322 2346788999999999 899999999999999999
Q ss_pred EEEEEecCCCCHHHHHhcCc-------------cccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCC
Q 004268 583 FLIYEYMERGSLFCVLRNDV-------------EAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSN 649 (764)
Q Consensus 583 ~lv~e~~~~~~L~~~l~~~~-------------~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~ 649 (764)
++||||+++++|.+++.... ....+++..++.++.||+.||+||| ++||+||||||+||+++.+
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~~ 178 (327)
T 1fvr_A 102 YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGEN 178 (327)
T ss_dssp EEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGG
T ss_pred EEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCccceEEEcCC
Confidence 99999999999999997542 2346899999999999999999999 8999999999999999999
Q ss_pred CCEEEeeeccccccCCCCCCceecccccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCccccccc----ccC
Q 004268 650 LEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLM-GSHPTDLLSSLSS----SSG 724 (764)
Q Consensus 650 ~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~llt-g~~Pf~~~~~~~~----~~~ 724 (764)
+.+||+|||++...... .......+++.|+|||++.+..++.++||||+|+++|+|++ |+.||.+...... ...
T Consensus 179 ~~~kL~Dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~ 257 (327)
T 1fvr_A 179 YVAKIADFGLSRGQEVY-VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG 257 (327)
T ss_dssp GCEEECCTTCEESSCEE-CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGT
T ss_pred CeEEEcccCcCcccccc-ccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHHHHhhcC
Confidence 99999999999754321 12233456889999999998889999999999999999998 9999987654221 112
Q ss_pred CcCCCCCCCcHHHHHHHhhhhccch
Q 004268 725 RKISQNPRLDLQCNAYLKNFSQGNH 749 (764)
Q Consensus 725 ~~~~~~~~~~~~~~~~~~~~l~~~~ 749 (764)
.....+...+..+.+++++|++.++
T Consensus 258 ~~~~~~~~~~~~l~~li~~~l~~dp 282 (327)
T 1fvr_A 258 YRLEKPLNCDDEVYDLMRQCWREKP 282 (327)
T ss_dssp CCCCCCTTBCHHHHHHHHHHTCSSG
T ss_pred CCCCCCCCCCHHHHHHHHHHccCCh
Confidence 2233455678899999999998873
No 225
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.8e-35 Score=311.30 Aligned_cols=235 Identities=31% Similarity=0.423 Sum_probs=189.3
Q ss_pred hhcCCcceeeeecCceeEEEEEECC-----CCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCE
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLSS-----GKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKC 581 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~ 581 (764)
..+|++.+.||+|+||+||+|.... +..||+|++..... ......+.+|++++++++||||+++++++.+.+.
T Consensus 43 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 120 (333)
T 1mqb_A 43 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYT--EKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKP 120 (333)
T ss_dssp TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCC--HHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS
T ss_pred hHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCC--HHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCC
Confidence 4678889999999999999997542 23599999875443 3334678999999999999999999999999999
Q ss_pred EEEEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeecccc
Q 004268 582 MFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLAR 661 (764)
Q Consensus 582 ~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~ 661 (764)
.++||||+++++|.+++... ...+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||.+.
T Consensus 121 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~ 195 (333)
T 1mqb_A 121 MMIITEYMENGALDKFLREK--DGEFSVLQLVGMLRGIAAGMKYLA---NMNYVHRDLAARNILVNSNLVCKVSDFGLSR 195 (333)
T ss_dssp EEEEEECCTTEEHHHHHHHT--TTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCCCC--
T ss_pred cEEEEeCCCCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChheEEECCCCcEEECCCCcch
Confidence 99999999999999999742 346899999999999999999999 8899999999999999999999999999998
Q ss_pred ccCCCCCC---ceecccccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccccccc----cCCcCCCCCCC
Q 004268 662 LLHPDSSN---RTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLM-GSHPTDLLSSLSSS----SGRKISQNPRL 733 (764)
Q Consensus 662 ~~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~llt-g~~Pf~~~~~~~~~----~~~~~~~~~~~ 733 (764)
........ .....+++.|+|||++.+..++.++||||+|+++|+|++ |+.||......+.. ...........
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 275 (333)
T 1mqb_A 196 VLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDC 275 (333)
T ss_dssp ---------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTC
T ss_pred hhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHCCCcCCCcccC
Confidence 76533221 122345778999999999999999999999999999999 99999766542211 11223345567
Q ss_pred cHHHHHHHhhhhccc
Q 004268 734 DLQCNAYLKNFSQGN 748 (764)
Q Consensus 734 ~~~~~~~~~~~l~~~ 748 (764)
+..+.+++++|++.+
T Consensus 276 ~~~l~~li~~~l~~~ 290 (333)
T 1mqb_A 276 PSAIYQLMMQCWQQE 290 (333)
T ss_dssp BHHHHHHHHHHTCSS
T ss_pred CHHHHHHHHHHcCCC
Confidence 889999999999877
No 226
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=3e-35 Score=307.31 Aligned_cols=242 Identities=21% Similarity=0.347 Sum_probs=188.0
Q ss_pred HhhcCCcceeeeecCceeEEEEEEC----CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCE
Q 004268 506 ATEDFHIKYCIGTGGYGSVYRAQLS----SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKC 581 (764)
Q Consensus 506 ~~~~y~~~~~ig~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~ 581 (764)
..++|.+.+.||+|+||+||+|... +++.||+|++...... ....+.+.+|++++++++||||+++++++.+...
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 110 (313)
T 3brb_A 32 DRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSS-QREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSS 110 (313)
T ss_dssp CGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCC-HHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC---
T ss_pred CHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccc-hhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccc
Confidence 4678999999999999999999653 3458999998765443 3345778999999999999999999999887553
Q ss_pred -----EEEEEEecCCCCHHHHHhcC---ccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEE
Q 004268 582 -----MFLIYEYMERGSLFCVLRND---VEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAF 653 (764)
Q Consensus 582 -----~~lv~e~~~~~~L~~~l~~~---~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~k 653 (764)
.++||||+++++|.+++... .....+++..++.++.|++.||.||| ++||+||||||+||+++.++.+|
T Consensus 111 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp~NIli~~~~~~k 187 (313)
T 3brb_A 111 QGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLS---NRNFLHRDLAARNCMLRDDMTVC 187 (313)
T ss_dssp ----CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCSGGGEEECTTSCEE
T ss_pred cCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCcEE
Confidence 59999999999999998532 13356899999999999999999999 99999999999999999999999
Q ss_pred EeeeccccccCCCCC--CceecccccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccccccc----cCCc
Q 004268 654 VADFGLARLLHPDSS--NRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLM-GSHPTDLLSSLSSS----SGRK 726 (764)
Q Consensus 654 l~Dfg~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~llt-g~~Pf~~~~~~~~~----~~~~ 726 (764)
|+|||.+........ ......+++.|+|||++.+..++.++||||+|+++|+|++ |..||.+....... ....
T Consensus 188 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~ 267 (313)
T 3brb_A 188 VADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGHR 267 (313)
T ss_dssp ECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCC
T ss_pred EeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHHcCCC
Confidence 999999987643321 1233456889999999999999999999999999999999 99999876553221 1222
Q ss_pred CCCCCCCcHHHHHHHhhhhccchhh
Q 004268 727 ISQNPRLDLQCNAYLKNFSQGNHRW 751 (764)
Q Consensus 727 ~~~~~~~~~~~~~~~~~~l~~~~~~ 751 (764)
...++..+..+.++++.|++.++.-
T Consensus 268 ~~~~~~~~~~l~~li~~~l~~dp~~ 292 (313)
T 3brb_A 268 LKQPEDCLDELYEIMYSCWRTDPLD 292 (313)
T ss_dssp CCCBTTCCHHHHHHHHHTTCSSGGG
T ss_pred CCCCccccHHHHHHHHHHcCCChhh
Confidence 3345567889999999999877443
No 227
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=1.3e-35 Score=305.51 Aligned_cols=232 Identities=25% Similarity=0.430 Sum_probs=194.6
Q ss_pred HhhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEee------
Q 004268 506 ATEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLH------ 578 (764)
Q Consensus 506 ~~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~------ 578 (764)
...+|++.+.||+|+||.||+|.+. +++.||+|++.... +.+.+|++++++++||||+++++++..
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-------~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (284)
T 2a19_B 9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN-------EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPE 81 (284)
T ss_dssp HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS-------GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC--
T ss_pred hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc-------HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcc
Confidence 4678999999999999999999876 79999999987543 346689999999999999999998864
Q ss_pred ----------CCEEEEEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecC
Q 004268 579 ----------NKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNS 648 (764)
Q Consensus 579 ----------~~~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~ 648 (764)
....++||||+++++|.+++... ....+++..+..++.|++.||.||| ++||+||||||+||+++.
T Consensus 82 ~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~ 157 (284)
T 2a19_B 82 TSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKR-RGEKLDKVLALELFEQITKGVDYIH---SKKLINRDLKPSNIFLVD 157 (284)
T ss_dssp -------CCEEEEEEEEECCCCSCBHHHHHHHG-GGSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEE
T ss_pred cccccccccCcceEEEEEeccCCCCHHHHHhhc-cCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCCHHHEEEcC
Confidence 45589999999999999999753 2346899999999999999999999 889999999999999999
Q ss_pred CCCEEEeeeccccccCCCCCCceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccccccccCCcCC
Q 004268 649 NLEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSSSSGRKIS 728 (764)
Q Consensus 649 ~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~~~~~~~~ 728 (764)
++.+||+|||.+....... ......|++.|+|||++.+..++.++||||+|+++|+|++|..||.......... ....
T Consensus 158 ~~~~kl~Dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~-~~~~ 235 (284)
T 2a19_B 158 TKQVKIGDFGLVTSLKNDG-KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDL-RDGI 235 (284)
T ss_dssp TTEEEECCCTTCEESSCCS-CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHHHHHHHH-HTTC
T ss_pred CCCEEECcchhheeccccc-cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHHHHHHHh-hccc
Confidence 9999999999998765433 2334578999999999999999999999999999999999999986543321111 1112
Q ss_pred CCCCCcHHHHHHHhhhhccchh
Q 004268 729 QNPRLDLQCNAYLKNFSQGNHR 750 (764)
Q Consensus 729 ~~~~~~~~~~~~~~~~l~~~~~ 750 (764)
.....+..+.+++++|++.++.
T Consensus 236 ~~~~~~~~~~~li~~~l~~dp~ 257 (284)
T 2a19_B 236 ISDIFDKKEKTLLQKLLSKKPE 257 (284)
T ss_dssp CCTTSCHHHHHHHHHHTCSSGG
T ss_pred ccccCCHHHHHHHHHHccCChh
Confidence 3455788999999999988743
No 228
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=8.7e-36 Score=317.55 Aligned_cols=236 Identities=27% Similarity=0.408 Sum_probs=183.7
Q ss_pred hcCCcceeeeecCceeEEEEEEC--CC--CEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEee-CCEE
Q 004268 508 EDFHIKYCIGTGGYGSVYRAQLS--SG--KLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLH-NKCM 582 (764)
Q Consensus 508 ~~y~~~~~ig~G~~g~V~~~~~~--~~--~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~ 582 (764)
..|++.+.||+|+||+||+|.+. ++ ..||+|.+..... ....+.+.+|+.++++++||||+++++++.. ++..
T Consensus 89 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ 166 (373)
T 3c1x_A 89 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITD--IGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP 166 (373)
T ss_dssp EEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSC--SHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCC
T ss_pred ceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCC--HHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCe
Confidence 45788899999999999999753 22 3689999875433 2345789999999999999999999998654 5678
Q ss_pred EEEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeeccccc
Q 004268 583 FLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLARL 662 (764)
Q Consensus 583 ~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~ 662 (764)
++||||+++++|.++++.. ...+++..+..++.||+.||+||| ++||+||||||+||+++.++.+||+|||+++.
T Consensus 167 ~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~ 241 (373)
T 3c1x_A 167 LVVLPYMKHGDLRNFIRNE--THNPTVKDLIGFGLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARD 241 (373)
T ss_dssp EEEEECCTTCBHHHHHHCT--TCCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC-----
T ss_pred EEEEECCCCCCHHHHHhhc--ccCCCHHHHHHHHHHHHHHHHHHH---HCCEecCccchheEEECCCCCEEEeecccccc
Confidence 9999999999999999743 345788999999999999999999 89999999999999999999999999999986
Q ss_pred cCCCCC----CceecccccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccccccc----cCCcCCCCCCC
Q 004268 663 LHPDSS----NRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLM-GSHPTDLLSSLSSS----SGRKISQNPRL 733 (764)
Q Consensus 663 ~~~~~~----~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~llt-g~~Pf~~~~~~~~~----~~~~~~~~~~~ 733 (764)
...... ......+++.|+|||++.+..++.++||||+|+++|||+| |.+||......+.. .......+...
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~ 321 (373)
T 3c1x_A 242 MYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYC 321 (373)
T ss_dssp ----------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHHHTTCCCCCCTTC
T ss_pred ccccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHHcCCCCCCCCCC
Confidence 543221 1123456788999999999999999999999999999999 78889876543321 12233345567
Q ss_pred cHHHHHHHhhhhccchh
Q 004268 734 DLQCNAYLKNFSQGNHR 750 (764)
Q Consensus 734 ~~~~~~~~~~~l~~~~~ 750 (764)
+..+.+++++||+.++.
T Consensus 322 ~~~l~~li~~cl~~dp~ 338 (373)
T 3c1x_A 322 PDPLYEVMLKCWHPKAE 338 (373)
T ss_dssp CHHHHHHHHHHTCSSGG
T ss_pred CHHHHHHHHHHcCCChh
Confidence 88999999999998743
No 229
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=3e-35 Score=303.40 Aligned_cols=236 Identities=25% Similarity=0.421 Sum_probs=182.8
Q ss_pred hhcCCcceeeeecCceeEEEEEECCCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEEEEEE
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFLIY 586 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 586 (764)
.++|++.+.||+|+||+||+|... ..||+|++...... ....+.+.+|++++++++||||++++++. .....++||
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~ 98 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPT-PQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVT 98 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCC-HHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEE
T ss_pred ccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCC-HHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEE
Confidence 578999999999999999999864 35999998765543 44467899999999999999999999965 455689999
Q ss_pred EecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeeccccccCCC
Q 004268 587 EYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLARLLHPD 666 (764)
Q Consensus 587 e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 666 (764)
||+++++|.+++... ...+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||.+......
T Consensus 99 e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 173 (289)
T 3og7_A 99 QWCEGSSLYHHLHAS--ETKFEMKKLIDIARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRW 173 (289)
T ss_dssp ECCCEEEHHHHHTTC-----CCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETTTEEEECCCC--------
T ss_pred EecCCCcHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHH---hCCcccccCccceEEECCCCCEEEccceeccccccc
Confidence 999999999999643 345899999999999999999999 899999999999999999999999999999765432
Q ss_pred --CCCceecccccccccccccc---cCCCCccchHHHHHHHHHHHHhCCCCCCccccccccc---------CCcCCCCCC
Q 004268 667 --SSNRTLVVGTYGYIAPELAY---TMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSSSS---------GRKISQNPR 732 (764)
Q Consensus 667 --~~~~~~~~g~~~y~aPE~~~---~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~~~---------~~~~~~~~~ 732 (764)
........|++.|+|||++. +..++.++||||+|+++|+|++|+.||.......... .........
T Consensus 174 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (289)
T 3og7_A 174 SGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSN 253 (289)
T ss_dssp ----------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCCCCTTSSCTT
T ss_pred cccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccccCcchhhcccc
Confidence 12223457899999999986 5678889999999999999999999998755422110 011112345
Q ss_pred CcHHHHHHHhhhhccchhh
Q 004268 733 LDLQCNAYLKNFSQGNHRW 751 (764)
Q Consensus 733 ~~~~~~~~~~~~l~~~~~~ 751 (764)
.+..+.+++++|++.++.-
T Consensus 254 ~~~~l~~li~~~l~~~p~~ 272 (289)
T 3og7_A 254 CPKRMKRLMAECLKKKRDE 272 (289)
T ss_dssp SCHHHHHHHHHHTCSSGGG
T ss_pred CCHHHHHHHHHHccCChhh
Confidence 6788999999999877443
No 230
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=2.9e-35 Score=302.39 Aligned_cols=237 Identities=24% Similarity=0.315 Sum_probs=192.2
Q ss_pred hhcCCcceeeeecCceeEEEEEECC----CCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEE
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLSS----GKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCM 582 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 582 (764)
.++|++.+.||+|+||+||+|.+.. +..||+|.+..... ....+.+.+|++++++++||||+++++++.++ ..
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~~ 87 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCT--LDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE-PT 87 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSC--HHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS-SC
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccC--chHHHHHHHHHHHHHhCCCCCcceEEEEEcCC-CC
Confidence 5789999999999999999997542 33699999876543 33457899999999999999999999998754 46
Q ss_pred EEEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeeccccc
Q 004268 583 FLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLARL 662 (764)
Q Consensus 583 ~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~ 662 (764)
++||||+++++|.+++... ...+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||.+..
T Consensus 88 ~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 162 (281)
T 3cc6_A 88 WIIMELYPYGELGHYLERN--KNSLKVLTLVLYSLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRY 162 (281)
T ss_dssp EEEEECCTTCBHHHHHHHH--TTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEEEETTEEEECCCCGGGC
T ss_pred EEEEecCCCCCHHHHHHhc--cccCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCccceEEECCCCcEEeCccCCCcc
Confidence 8999999999999999742 345889999999999999999999 89999999999999999999999999999987
Q ss_pred cCCCCC-CceecccccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccccccc----cCCcCCCCCCCcHH
Q 004268 663 LHPDSS-NRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLM-GSHPTDLLSSLSSS----SGRKISQNPRLDLQ 736 (764)
Q Consensus 663 ~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~llt-g~~Pf~~~~~~~~~----~~~~~~~~~~~~~~ 736 (764)
...... ......+++.|+|||++.+..++.++||||+|+++|+|++ |+.||......... .......+...+..
T Consensus 163 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (281)
T 3cc6_A 163 IEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDLCPPV 242 (281)
T ss_dssp C---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHHHHTCCCCCCTTCCHH
T ss_pred cccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHHhcCCCCCCCCCCCHH
Confidence 643322 1233456789999999998999999999999999999998 99999765443221 11223344557889
Q ss_pred HHHHHhhhhccchhh
Q 004268 737 CNAYLKNFSQGNHRW 751 (764)
Q Consensus 737 ~~~~~~~~l~~~~~~ 751 (764)
+.+++++|++.++.-
T Consensus 243 l~~li~~~l~~~p~~ 257 (281)
T 3cc6_A 243 LYTLMTRCWDYDPSD 257 (281)
T ss_dssp HHHHHHHHTCSSGGG
T ss_pred HHHHHHHHccCCchh
Confidence 999999999877443
No 231
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=9.2e-36 Score=307.70 Aligned_cols=236 Identities=24% Similarity=0.385 Sum_probs=192.6
Q ss_pred HhhcCCcce-eeeecCceeEEEEEE---CCCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCE
Q 004268 506 ATEDFHIKY-CIGTGGYGSVYRAQL---SSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKC 581 (764)
Q Consensus 506 ~~~~y~~~~-~ig~G~~g~V~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~ 581 (764)
..++|++.+ .||+|+||+||+|.+ .+++.||+|++...... ....+.+.+|+++++.++||||+++++++ ..+.
T Consensus 14 ~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~ 91 (291)
T 1xbb_A 14 DRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAND-PALKDELLAEANVMQQLDNPYIVRMIGIC-EAES 91 (291)
T ss_dssp CGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC------CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSS
T ss_pred cchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccC-HHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCC
Confidence 357899988 999999999999953 25788999999765432 33457899999999999999999999999 5667
Q ss_pred EEEEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeecccc
Q 004268 582 MFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLAR 661 (764)
Q Consensus 582 ~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~ 661 (764)
.++||||+++++|.+++.. ...+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||.+.
T Consensus 92 ~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~ 165 (291)
T 1xbb_A 92 WMLVMEMAELGPLNKYLQQ---NRHVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSK 165 (291)
T ss_dssp EEEEEECCTTEEHHHHHHH---CTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTCE
T ss_pred cEEEEEeCCCCCHHHHHHh---CcCCCHHHHHHHHHHHHHHHHHHH---hCCeEcCCCCcceEEEeCCCcEEEccCCcce
Confidence 8999999999999999974 345889999999999999999999 8899999999999999999999999999998
Q ss_pred ccCCCCCCc---eecccccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccccccc----cCCcCCCCCCC
Q 004268 662 LLHPDSSNR---TLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLM-GSHPTDLLSSLSSS----SGRKISQNPRL 733 (764)
Q Consensus 662 ~~~~~~~~~---~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~llt-g~~Pf~~~~~~~~~----~~~~~~~~~~~ 733 (764)
......... ....+++.|+|||++.+..++.++||||+|+++|+|++ |+.||.+....... .......++..
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (291)
T 1xbb_A 166 ALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGC 245 (291)
T ss_dssp ECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTC
T ss_pred eeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCC
Confidence 765433221 22345688999999998889999999999999999999 99999876543221 11223345567
Q ss_pred cHHHHHHHhhhhccch
Q 004268 734 DLQCNAYLKNFSQGNH 749 (764)
Q Consensus 734 ~~~~~~~~~~~l~~~~ 749 (764)
+..+.++++.|++.++
T Consensus 246 ~~~l~~li~~~l~~dp 261 (291)
T 1xbb_A 246 PREMYDLMNLCWTYDV 261 (291)
T ss_dssp CHHHHHHHHHHTCSST
T ss_pred CHHHHHHHHHHcCCCh
Confidence 8899999999998773
No 232
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=1.7e-35 Score=309.80 Aligned_cols=245 Identities=23% Similarity=0.352 Sum_probs=199.1
Q ss_pred HHHHHHhhcCCcceeeeecCceeEEEEEE------CCCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhc-CCCceeeEe
Q 004268 501 EEMIEATEDFHIKYCIGTGGYGSVYRAQL------SSGKLVALKKLHRSETEEPAFLESFQTEARLLSQI-RHRNIVKLY 573 (764)
Q Consensus 501 ~~~~~~~~~y~~~~~ig~G~~g~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~ 573 (764)
..+....++|++.+.||+|+||+||+|.+ .+++.||+|++..... ....+.+.+|+++++++ +||||++++
T Consensus 20 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~~hp~iv~~~ 97 (316)
T 2xir_A 20 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT--HSEHRALMSELKILIHIGHHLNVVNLL 97 (316)
T ss_dssp HHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCC--HHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred cceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCC--cHHHHHHHHHHHHHHhcccCCCeeeEE
Confidence 34444568999999999999999999974 3568999999976543 23346789999999999 799999999
Q ss_pred eEEeeCC-EEEEEEEecCCCCHHHHHhcCcc-------------ccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCC
Q 004268 574 GFCLHNK-CMFLIYEYMERGSLFCVLRNDVE-------------AVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDI 639 (764)
Q Consensus 574 ~~~~~~~-~~~lv~e~~~~~~L~~~l~~~~~-------------~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dl 639 (764)
+++...+ ..++||||+++++|.+++..... ...+++..+..++.|++.||+||| ++||+||||
T Consensus 98 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~di 174 (316)
T 2xir_A 98 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDL 174 (316)
T ss_dssp EEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHH---HTTCCCSCC
T ss_pred EEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHH---hCCcccccC
Confidence 9987754 48999999999999999975432 122788999999999999999999 889999999
Q ss_pred CCCCeeecCCCCEEEeeeccccccCCCCCC--ceecccccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcc
Q 004268 640 SSNNILLNSNLEAFVADFGLARLLHPDSSN--RTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLM-GSHPTDLL 716 (764)
Q Consensus 640 kp~NIll~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~llt-g~~Pf~~~ 716 (764)
||+||+++.++.+||+|||.+......... .....+++.|+|||++.+..++.++||||+|+++|+|+| |+.||.+.
T Consensus 175 kp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~ 254 (316)
T 2xir_A 175 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 254 (316)
T ss_dssp SGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred ccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCccc
Confidence 999999999999999999999876543322 223467889999999999999999999999999999998 99999875
Q ss_pred ccccc-----ccCCcCCCCCCCcHHHHHHHhhhhccchh
Q 004268 717 SSLSS-----SSGRKISQNPRLDLQCNAYLKNFSQGNHR 750 (764)
Q Consensus 717 ~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 750 (764)
..... ........+...+..+.+++..|++.++.
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~ 293 (316)
T 2xir_A 255 KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPS 293 (316)
T ss_dssp CCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGG
T ss_pred chhHHHHHHhccCccCCCCCCCCHHHHHHHHHHcCCChh
Confidence 53211 11122333455788999999999987743
No 233
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=2.7e-35 Score=305.98 Aligned_cols=235 Identities=30% Similarity=0.429 Sum_probs=184.5
Q ss_pred hhcCCcceeeeecCceeEEEEEECCCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHh--cCCCceeeEeeEEee----CC
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQ--IRHRNIVKLYGFCLH----NK 580 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~--l~hpniv~~~~~~~~----~~ 580 (764)
.++|++.+.||+|+||+||+|++ +++.||+|++.... .+.+.+|.+++.. ++||||+++++++.. ..
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~------~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~ 79 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSRD------EKSWFRETELYNTVMLRHENILGFIASDMTSRHSST 79 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGGG------HHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEecccc------chhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCc
Confidence 57899999999999999999988 58999999986532 2456677777777 799999999998654 35
Q ss_pred EEEEEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhc-----CCCCcEEcCCCCCCeeecCCCCEEEe
Q 004268 581 CMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYD-----CKPSIVHRDISSNNILLNSNLEAFVA 655 (764)
Q Consensus 581 ~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-----~~~~iiH~Dlkp~NIll~~~~~~kl~ 655 (764)
..++||||+++|+|.++++. ..+++..+..++.|++.||+|||.. +++||+||||||+||+++.++.+||+
T Consensus 80 ~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~ 155 (301)
T 3q4u_A 80 QLWLITHYHEMGSLYDYLQL----TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIA 155 (301)
T ss_dssp EEEEEECCCTTCBHHHHHTT----CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEEC
T ss_pred eeEEehhhccCCCHHHHHhh----cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEe
Confidence 68999999999999999953 3589999999999999999999932 15699999999999999999999999
Q ss_pred eeccccccCCCCCC----ceecccccccccccccccC------CCCccchHHHHHHHHHHHHhC----------CCCCCc
Q 004268 656 DFGLARLLHPDSSN----RTLVVGTYGYIAPELAYTM------AVTEKCDVYSFGVVALEVLMG----------SHPTDL 715 (764)
Q Consensus 656 Dfg~~~~~~~~~~~----~~~~~g~~~y~aPE~~~~~------~~~~~~DiwslG~il~~lltg----------~~Pf~~ 715 (764)
|||+++........ .....||+.|+|||++.+. .+++++||||+|+++|||+|| +.||..
T Consensus 156 Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~ 235 (301)
T 3q4u_A 156 DLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYD 235 (301)
T ss_dssp CCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTT
T ss_pred eCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccc
Confidence 99999766443322 1234789999999999877 455799999999999999999 888865
Q ss_pred cccccccc------CCcCCCCCC---------CcHHHHHHHhhhhccchhhH
Q 004268 716 LSSLSSSS------GRKISQNPR---------LDLQCNAYLKNFSQGNHRWE 752 (764)
Q Consensus 716 ~~~~~~~~------~~~~~~~~~---------~~~~~~~~~~~~l~~~~~~~ 752 (764)
........ .......+. .+..+.+++++|++.++.-|
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R 287 (301)
T 3q4u_A 236 VVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSAR 287 (301)
T ss_dssp TSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGS
T ss_pred cCCCCcchhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhC
Confidence 43321110 011111122 33568889999998774443
No 234
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=1.2e-35 Score=316.86 Aligned_cols=232 Identities=26% Similarity=0.361 Sum_probs=191.3
Q ss_pred hhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeC-----C
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHN-----K 580 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~-----~ 580 (764)
.++|++.+.||+|+||.||+|.+. +++.||+|++.... .....+.+.+|++++++++||||+++++++... .
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 103 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE--HQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMK 103 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTT--CHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCC
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEecccc--CcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccc
Confidence 578999999999999999999865 78899999997543 334457889999999999999999999998765 3
Q ss_pred EEEEEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeeccc
Q 004268 581 CMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLA 660 (764)
Q Consensus 581 ~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~ 660 (764)
..|+||||+++ +|.+++.. ..+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||.+
T Consensus 104 ~~~iv~e~~~~-~L~~~l~~----~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a 175 (364)
T 3qyz_A 104 DVYIVQDLMET-DLYKLLKT----QHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLA 175 (364)
T ss_dssp CEEEEEECCSE-EHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred eEEEEEcccCc-CHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCChHhEEECCCCCEEEEeCcce
Confidence 68999999985 89998864 35899999999999999999999 899999999999999999999999999999
Q ss_pred cccCCCCC---Cceeccccccccccccccc-CCCCccchHHHHHHHHHHHHhCCCCCCcccccccccCC-----------
Q 004268 661 RLLHPDSS---NRTLVVGTYGYIAPELAYT-MAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSSSSGR----------- 725 (764)
Q Consensus 661 ~~~~~~~~---~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~~~~~----------- 725 (764)
........ ......||+.|+|||++.+ ..++.++||||+||++|+|++|+.||.+....+.....
T Consensus 176 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~ 255 (364)
T 3qyz_A 176 RVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 255 (364)
T ss_dssp EECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHH
T ss_pred EecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHH
Confidence 87643322 1234578999999998654 45899999999999999999999999876543211100
Q ss_pred -----------------------cCCCCCCCcHHHHHHHhhhhccc
Q 004268 726 -----------------------KISQNPRLDLQCNAYLKNFSQGN 748 (764)
Q Consensus 726 -----------------------~~~~~~~~~~~~~~~~~~~l~~~ 748 (764)
.....+..+..+.+++++|++.+
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d 301 (364)
T 3qyz_A 256 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFN 301 (364)
T ss_dssp HHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSS
T ss_pred HHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCC
Confidence 00112557888999999999987
No 235
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=2.6e-35 Score=309.78 Aligned_cols=237 Identities=27% Similarity=0.384 Sum_probs=196.7
Q ss_pred hhcCCcceeeeecCceeEEEEEE-----CCCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEe--eC
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQL-----SSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCL--HN 579 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~--~~ 579 (764)
.++|++.+.||+|+||.||+|++ .+++.||+|++.... ....+.+.+|++++++++||||+++++++. +.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~ 98 (327)
T 3lxl_A 22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG---PDQQRDFQREIQILKALHSDFIVKYRGVSYGPGR 98 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCC---HHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSS
T ss_pred hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCC---HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCC
Confidence 47899999999999999999983 368899999987643 334577899999999999999999999886 45
Q ss_pred CEEEEEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeecc
Q 004268 580 KCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGL 659 (764)
Q Consensus 580 ~~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~ 659 (764)
...++||||+++++|.+++... ...+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||.
T Consensus 99 ~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~ 173 (327)
T 3lxl_A 99 QSLRLVMEYLPSGCLRDFLQRH--RARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFGL 173 (327)
T ss_dssp CEEEEEEECCTTCBHHHHHHHH--GGGCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCGGG
T ss_pred ceEEEEEeecCCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCChhhEEECCCCCEEEccccc
Confidence 6799999999999999999742 335899999999999999999999 89999999999999999999999999999
Q ss_pred ccccCCCCCC---ceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccccc----------------
Q 004268 660 ARLLHPDSSN---RTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLS---------------- 720 (764)
Q Consensus 660 ~~~~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~---------------- 720 (764)
+......... .....+++.|+|||++.+..++.++||||+|+++|+|++|+.||.......
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 253 (327)
T 3lxl_A 174 AKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRL 253 (327)
T ss_dssp CEECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHH
T ss_pred ceecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHH
Confidence 9876543321 223457888999999999899999999999999999999999986544310
Q ss_pred ---cccCCcCCCCCCCcHHHHHHHhhhhccchhh
Q 004268 721 ---SSSGRKISQNPRLDLQCNAYLKNFSQGNHRW 751 (764)
Q Consensus 721 ---~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 751 (764)
..........+..+..+.++++.|++.++.-
T Consensus 254 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~ 287 (327)
T 3lxl_A 254 LELLEEGQRLPAPPACPAEVHELMKLCWAPSPQD 287 (327)
T ss_dssp HHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGG
T ss_pred HHHhhcccCCCCCCcccHHHHHHHHHHcCCChhh
Confidence 0111223345667889999999999987433
No 236
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=1.1e-35 Score=316.41 Aligned_cols=200 Identities=28% Similarity=0.402 Sum_probs=157.7
Q ss_pred hhcCCcceeeeecCceeEEEEEE-CCCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeC------
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQL-SSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHN------ 579 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~------ 579 (764)
.++|++.+.||+|+||.||+|.+ .+|+.||+|++..... .....+.+.+|+++++.++||||+++++++...
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~ 106 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ-SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 106 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTS-SHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCcccc-CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccC
Confidence 57899999999999999999975 4789999999976543 334457888999999999999999999998654
Q ss_pred CEEEEEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeecc
Q 004268 580 KCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGL 659 (764)
Q Consensus 580 ~~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~ 659 (764)
...|+|+|++ +++|.+++.. ..+++..+..++.||+.||+||| ++||+||||||+||+++.++.+||+|||+
T Consensus 107 ~~~~lv~e~~-~~~L~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kL~DFG~ 178 (367)
T 2fst_X 107 NDVYLVTHLM-GADLNNIVKC----QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGL 178 (367)
T ss_dssp CCCEEEEECC-CEECC---------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECC---
T ss_pred CeEEEEeccc-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHhhEEECCCCCEEEeeccc
Confidence 5589999999 6799888863 35899999999999999999999 89999999999999999999999999999
Q ss_pred ccccCCCCCCceeccccccccccccccc-CCCCccchHHHHHHHHHHHHhCCCCCCcccc
Q 004268 660 ARLLHPDSSNRTLVVGTYGYIAPELAYT-MAVTEKCDVYSFGVVALEVLMGSHPTDLLSS 718 (764)
Q Consensus 660 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~~lltg~~Pf~~~~~ 718 (764)
++..... .....||+.|+|||++.+ ..++.++||||+||++|+|++|+.||.+.+.
T Consensus 179 a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~ 235 (367)
T 2fst_X 179 ARHTADE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 235 (367)
T ss_dssp ---------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred ccccccc---CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCH
Confidence 9865432 334678999999999887 6789999999999999999999999987654
No 237
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=2.9e-35 Score=305.20 Aligned_cols=239 Identities=27% Similarity=0.401 Sum_probs=192.4
Q ss_pred hhcCCcceeeeecCceeEEEEEECC----CCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEe-eCCE
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLSS----GKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCL-HNKC 581 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~-~~~~ 581 (764)
..+|++.+.||+|+||+||+|.+.. +..||+|.+..... ....+.+.+|++++++++||||+++++++. .++.
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 101 (298)
T 3f66_A 24 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITD--IGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGS 101 (298)
T ss_dssp GEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCS--HHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSC
T ss_pred ceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCC--HHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCc
Confidence 4679999999999999999997542 23589998876433 344578899999999999999999999854 5567
Q ss_pred EEEEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeecccc
Q 004268 582 MFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLAR 661 (764)
Q Consensus 582 ~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~ 661 (764)
.++||||+++++|.+++.. ....+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||.+.
T Consensus 102 ~~~v~e~~~~~~L~~~l~~--~~~~~~~~~~~~i~~ql~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~ 176 (298)
T 3f66_A 102 PLVVLPYMKHGDLRNFIRN--ETHNPTVKDLIGFGLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLAR 176 (298)
T ss_dssp CEEEEECCTTCBHHHHHHC--TTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECSCGGGC
T ss_pred eEEEEeCCCCCCHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCchheEEECCCCCEEECcccccc
Confidence 8999999999999999974 2345788999999999999999999 8999999999999999999999999999998
Q ss_pred ccCCCC----CCceecccccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccccccc----cCCcCCCCCC
Q 004268 662 LLHPDS----SNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLM-GSHPTDLLSSLSSS----SGRKISQNPR 732 (764)
Q Consensus 662 ~~~~~~----~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~llt-g~~Pf~~~~~~~~~----~~~~~~~~~~ 732 (764)
...... .......+++.|+|||++.+..++.++||||+|+++|+|++ |.+||......+.. .......+..
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (298)
T 3f66_A 177 DMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEY 256 (298)
T ss_dssp CCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHHTTCCCCCCTT
T ss_pred cccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhcCCCCCCCcc
Confidence 664322 11233467789999999999999999999999999999999 67777765543321 1223333455
Q ss_pred CcHHHHHHHhhhhccchhhH
Q 004268 733 LDLQCNAYLKNFSQGNHRWE 752 (764)
Q Consensus 733 ~~~~~~~~~~~~l~~~~~~~ 752 (764)
.+..+.++++.|++.++.-|
T Consensus 257 ~~~~l~~li~~~l~~~p~~R 276 (298)
T 3f66_A 257 CPDPLYEVMLKCWHPKAEMR 276 (298)
T ss_dssp CCHHHHHHHHHHTCSSGGGS
T ss_pred CCHHHHHHHHHHcCCChhhC
Confidence 78899999999999874433
No 238
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=1.2e-35 Score=306.54 Aligned_cols=233 Identities=21% Similarity=0.378 Sum_probs=191.2
Q ss_pred hhcCCcceeeeecCceeEEEEEEC-CC-------CEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEee
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLS-SG-------KLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLH 578 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~-~~-------~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~ 578 (764)
.++|++.+.||+|+||+||+|.+. ++ ..||+|++...... ..+.+.+|++++++++||||+++++++.+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~---~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 83 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRN---YSESFFEAASMMSKLSHKHLVLNYGVCVC 83 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGG---GHHHHHHHHHHHHTSCCTTBCCEEEEECC
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHH---HHHHHHHHHHHHHhCCCCCEeEEEEEEEe
Confidence 478999999999999999999754 33 47999998654332 24778999999999999999999999999
Q ss_pred CCEEEEEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCC-------
Q 004268 579 NKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLE------- 651 (764)
Q Consensus 579 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~------- 651 (764)
++..++||||+++++|.+++... ...+++..+..++.|++.||+||| ++||+||||||+||+++.++.
T Consensus 84 ~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~~~ 158 (289)
T 4fvq_A 84 GDENILVQEFVKFGSLDTYLKKN--KNCINILWKLEVAKQLAAAMHFLE---ENTLIHGNVCAKNILLIREEDRKTGNPP 158 (289)
T ss_dssp TTCCEEEEECCTTCBHHHHHHHT--GGGCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEEECCBGGGTBCC
T ss_pred CCCCEEEEECCCCCCHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHh---hCCeECCCcCcceEEEecCCcccccccc
Confidence 99999999999999999999753 334889999999999999999999 899999999999999998877
Q ss_pred -EEEeeeccccccCCCCCCceeccccccccccccccc-CCCCccchHHHHHHHHHHHHhC-CCCCCcccccccc--cCCc
Q 004268 652 -AFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYT-MAVTEKCDVYSFGVVALEVLMG-SHPTDLLSSLSSS--SGRK 726 (764)
Q Consensus 652 -~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~~lltg-~~Pf~~~~~~~~~--~~~~ 726 (764)
+||+|||.+..... .....+++.|+|||++.+ ..++.++||||+|+++|+|++| .+||......... ....
T Consensus 159 ~~kl~Dfg~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~~~ 234 (289)
T 4fvq_A 159 FIKLSDPGISITVLP----KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDR 234 (289)
T ss_dssp EEEECCCCSCTTTSC----HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTT
T ss_pred eeeeccCcccccccC----ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHhhcc
Confidence 99999999875432 233568899999999987 6789999999999999999995 5666554432111 1122
Q ss_pred CCCCCCCcHHHHHHHhhhhccchhh
Q 004268 727 ISQNPRLDLQCNAYLKNFSQGNHRW 751 (764)
Q Consensus 727 ~~~~~~~~~~~~~~~~~~l~~~~~~ 751 (764)
...++..+..+.+++++|++.++.-
T Consensus 235 ~~~~~~~~~~l~~li~~~l~~dp~~ 259 (289)
T 4fvq_A 235 HQLPAPKAAELANLINNCMDYEPDH 259 (289)
T ss_dssp CCCCCCSSCTTHHHHHHHSCSSGGG
T ss_pred CCCCCCCCHHHHHHHHHHcCCChhH
Confidence 3334556788999999999887443
No 239
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=1.5e-35 Score=304.01 Aligned_cols=232 Identities=26% Similarity=0.405 Sum_probs=188.0
Q ss_pred hhcCCcceeeeecCceeEEEEEECCCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeC-CEEEEE
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHN-KCMFLI 585 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~-~~~~lv 585 (764)
.++|++.+.||+|+||+||+|+.. |+.||+|++..... .+.+.+|++++++++||||+++++++.+. +..++|
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~-----~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv 93 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDAT-----AQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIV 93 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC-------HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEE
T ss_pred hhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecchhH-----HHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEE
Confidence 578999999999999999999875 88999999975432 36788999999999999999999987554 468999
Q ss_pred EEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeeccccccCC
Q 004268 586 YEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLARLLHP 665 (764)
Q Consensus 586 ~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 665 (764)
|||+++++|.+++... ....+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||.+.....
T Consensus 94 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~ 169 (278)
T 1byg_A 94 TEYMAKGSLVDYLRSR-GRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS 169 (278)
T ss_dssp ECCCTTEEHHHHHHHH-HHHHCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTSCEEECCCCC------
T ss_pred EecCCCCCHHHHHHhc-ccccCCHHHHHHHHHHHHHHHHHHH---hCCccccCCCcceEEEeCCCcEEEeeccccccccc
Confidence 9999999999999743 2233788999999999999999999 89999999999999999999999999999976543
Q ss_pred CCCCceecccccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccccccc----cCCcCCCCCCCcHHHHHH
Q 004268 666 DSSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLM-GSHPTDLLSSLSSS----SGRKISQNPRLDLQCNAY 740 (764)
Q Consensus 666 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~llt-g~~Pf~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 740 (764)
. .....+++.|+|||++.+..++.++||||+|+++|+|++ |+.||......+.. ...........+..+.++
T Consensus 170 ~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 246 (278)
T 1byg_A 170 T---QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYEV 246 (278)
T ss_dssp ---------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTCCCCCCTTCCHHHHHH
T ss_pred c---ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCCcccCCHHHHHH
Confidence 2 223457889999999999999999999999999999998 99999876543221 122233455678899999
Q ss_pred Hhhhhccchhh
Q 004268 741 LKNFSQGNHRW 751 (764)
Q Consensus 741 ~~~~l~~~~~~ 751 (764)
+++|++.++.-
T Consensus 247 i~~~l~~~p~~ 257 (278)
T 1byg_A 247 MKNCWHLDAAM 257 (278)
T ss_dssp HHHHTCSSGGG
T ss_pred HHHHhcCChhh
Confidence 99999887443
No 240
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=5.2e-36 Score=319.72 Aligned_cols=236 Identities=19% Similarity=0.270 Sum_probs=183.7
Q ss_pred hhcCCcceeeeecCceeEEEEEECC------CCEEEEEEccCCCCCcHHHH--------HHHHHHHHHHHhcCCCceeeE
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLSS------GKLVALKKLHRSETEEPAFL--------ESFQTEARLLSQIRHRNIVKL 572 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~~------~~~vavK~~~~~~~~~~~~~--------~~~~~E~~~l~~l~hpniv~~ 572 (764)
.++|++.+.||+|+||+||+|.+.. ++.||+|++........... ..+..|+..++.++||||+++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~ 113 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY 113 (364)
T ss_dssp CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence 4689999999999999999998754 47899999876542111000 123345556667789999999
Q ss_pred eeEEeeC----CEEEEEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeec-
Q 004268 573 YGFCLHN----KCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLN- 647 (764)
Q Consensus 573 ~~~~~~~----~~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~- 647 (764)
++++... ...++||||+ +++|.+++... ...+++..+..++.||+.||+||| ++||+||||||+||+++
T Consensus 114 ~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~--~~~l~~~~~~~i~~qi~~~l~~lH---~~~iiHrDlkp~Nill~~ 187 (364)
T 3op5_A 114 WGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEAN--AKRFSRKTVLQLSLRILDILEYIH---EHEYVHGDIKASNLLLNY 187 (364)
T ss_dssp EEEEEEEETTEEEEEEEEECE-EEEHHHHHHHT--TSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEES
T ss_pred EeeeeeccCCcceEEEEEeCC-CCCHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEEecCCHHHEEEec
Confidence 9998764 5589999999 89999999752 346899999999999999999999 88999999999999999
Q ss_pred -CCCCEEEeeeccccccCCCCC-------CceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCccccc
Q 004268 648 -SNLEAFVADFGLARLLHPDSS-------NRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSL 719 (764)
Q Consensus 648 -~~~~~kl~Dfg~~~~~~~~~~-------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~ 719 (764)
.++.+||+|||+++.+..... ......||+.|+|||++.+..++.++|||||||++|+|+||+.||.+....
T Consensus 188 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~ 267 (364)
T 3op5_A 188 KNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKD 267 (364)
T ss_dssp SCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTC
T ss_pred CCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccC
Confidence 889999999999977643221 113345999999999999999999999999999999999999999864321
Q ss_pred ccccC--------------CcCCCCCCCcHHHHHHHhhhhccc
Q 004268 720 SSSSG--------------RKISQNPRLDLQCNAYLKNFSQGN 748 (764)
Q Consensus 720 ~~~~~--------------~~~~~~~~~~~~~~~~~~~~l~~~ 748 (764)
..... .........+..+.++++.|+..+
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~ 310 (364)
T 3op5_A 268 PKYVRDSKIRYRENIASLMDKCFPAANAPGEIAKYMETVKLLD 310 (364)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHSCTTCCCHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHhhhhHHHHHHHhcccccCHHHHHHHHHHHhcCC
Confidence 11000 000112456788888898888876
No 241
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=6.6e-36 Score=310.95 Aligned_cols=239 Identities=24% Similarity=0.390 Sum_probs=177.7
Q ss_pred HhhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEEEE
Q 004268 506 ATEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFL 584 (764)
Q Consensus 506 ~~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 584 (764)
..++|++.+.||+|+||+||+|... +++.||+|++...... ...+.+.+|++++++++||||+++++++...+..++
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 90 (303)
T 2vwi_A 13 NRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQ--TSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWL 90 (303)
T ss_dssp CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC------------------CCCCCCCTTBCCEEEEEESSSCEEE
T ss_pred chhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcc--hhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEE
Confidence 4678999999999999999999754 7899999998654432 224678899999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHhcC-----ccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeecc
Q 004268 585 IYEYMERGSLFCVLRND-----VEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGL 659 (764)
Q Consensus 585 v~e~~~~~~L~~~l~~~-----~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~ 659 (764)
||||+++++|.+++... .....+++..+..++.||+.||+||| ++||+||||||+||+++.++.+||+|||.
T Consensus 91 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~ 167 (303)
T 2vwi_A 91 VMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH---KNGQIHRDVKAGNILLGEDGSVQIADFGV 167 (303)
T ss_dssp EEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTCCEEECCCHH
T ss_pred EehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHH---hCCCCCCCCChhhEEEcCCCCEEEEeccc
Confidence 99999999999998631 12345899999999999999999999 88999999999999999999999999999
Q ss_pred ccccCCCCC-----Cceeccccccccccccccc-CCCCccchHHHHHHHHHHHHhCCCCCCccccccccc----------
Q 004268 660 ARLLHPDSS-----NRTLVVGTYGYIAPELAYT-MAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSSSS---------- 723 (764)
Q Consensus 660 ~~~~~~~~~-----~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~~~---------- 723 (764)
+........ ......|++.|+|||++.+ ..++.++||||+|+++|+|++|+.||..........
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 247 (303)
T 2vwi_A 168 SAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSL 247 (303)
T ss_dssp HHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCCCT
T ss_pred hheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCCcc
Confidence 977643221 1233578999999999876 568999999999999999999999998754422110
Q ss_pred ---CCcCCCCCCCcHHHHHHHhhhhccch
Q 004268 724 ---GRKISQNPRLDLQCNAYLKNFSQGNH 749 (764)
Q Consensus 724 ---~~~~~~~~~~~~~~~~~~~~~l~~~~ 749 (764)
..........+..+.++++.|++.++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~li~~~l~~dp 276 (303)
T 2vwi_A 248 ETGVQDKEMLKKYGKSFRKMISLCLQKDP 276 (303)
T ss_dssp TC-----CCCCCCCHHHHHHHHHHCCSSG
T ss_pred ccccccchhhhhhhHHHHHHHHHHccCCh
Confidence 01111234567889999999999883
No 242
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=6.2e-36 Score=317.64 Aligned_cols=236 Identities=25% Similarity=0.400 Sum_probs=195.1
Q ss_pred hhcCCcceeeeecCceeEEEEEECCCCEEEEEEccCCCCCcH--------------HHHHHHHHHHHHHHhcCCCceeeE
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEP--------------AFLESFQTEARLLSQIRHRNIVKL 572 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~--------------~~~~~~~~E~~~l~~l~hpniv~~ 572 (764)
.++|++.+.||+|+||.||+|.. +++.||+|++........ ...+.+.+|++++++++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 57899999999999999999988 899999999865432211 112678899999999999999999
Q ss_pred eeEEeeCCEEEEEEEecCCCCHHHH------HhcCccccccCHHHHHHHHHHHHHHHHHHHhcCC-CCcEEcCCCCCCee
Q 004268 573 YGFCLHNKCMFLIYEYMERGSLFCV------LRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCK-PSIVHRDISSNNIL 645 (764)
Q Consensus 573 ~~~~~~~~~~~lv~e~~~~~~L~~~------l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~-~~iiH~Dlkp~NIl 645 (764)
++++.+.+..++||||+++++|.++ +... ....+++..+..++.|++.||+||| + +||+||||||+||+
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~i~H~dl~p~Nil 184 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKN-YTCFIPIQVIKCIIKSVLNSFSYIH---NEKNICHRDVKPSNIL 184 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSS-SCCCCCHHHHHHHHHHHHHHHHHHH---HTSCEECCCCCGGGEE
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhc-cccCCCHHHHHHHHHHHHHHHHHHh---ccCCEeecCCChHhEE
Confidence 9999999999999999999999998 5432 2456899999999999999999999 7 89999999999999
Q ss_pred ecCCCCEEEeeeccccccCCCCCCceecccccccccccccccC-CCCc-cchHHHHHHHHHHHHhCCCCCCccccccc--
Q 004268 646 LNSNLEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYTM-AVTE-KCDVYSFGVVALEVLMGSHPTDLLSSLSS-- 721 (764)
Q Consensus 646 l~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~-~~DiwslG~il~~lltg~~Pf~~~~~~~~-- 721 (764)
++.++.+||+|||.+...... ......|++.|+|||++.+. .++. ++||||+|+++|+|++|+.||........
T Consensus 185 ~~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~ 262 (348)
T 2pml_X 185 MDKNGRVKLSDFGESEYMVDK--KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELF 262 (348)
T ss_dssp ECTTSCEEECCCTTCEECBTT--EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHHH
T ss_pred EcCCCcEEEeccccccccccc--cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHH
Confidence 999999999999999876433 33445789999999999887 6666 99999999999999999999986654110
Q ss_pred --ccCCcCCCC-------------------CCCcHHHHHHHhhhhccch
Q 004268 722 --SSGRKISQN-------------------PRLDLQCNAYLKNFSQGNH 749 (764)
Q Consensus 722 --~~~~~~~~~-------------------~~~~~~~~~~~~~~l~~~~ 749 (764)
........+ +.++..+.+++++|++.++
T Consensus 263 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP 311 (348)
T 2pml_X 263 NNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNP 311 (348)
T ss_dssp HHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSG
T ss_pred HHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCCh
Confidence 011111111 5678899999999999873
No 243
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=2.8e-35 Score=309.47 Aligned_cols=238 Identities=26% Similarity=0.367 Sum_probs=192.7
Q ss_pred hhcCCcceeeeecCceeEEEEEE------CCCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCC
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQL------SSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNK 580 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~ 580 (764)
.++|++.+.||+|+||+||+|++ .+++.||+|.+..... ......+.+|+.++++++||||+++++++.+..
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 106 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS--EQDELDFLMEALIISKFNHQNIVRCIGVSLQSL 106 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCC--HHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccc--hhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCC
Confidence 57899999999999999999973 3577999999975432 333467889999999999999999999999999
Q ss_pred EEEEEEEecCCCCHHHHHhcCcc----ccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecC---CCCEE
Q 004268 581 CMFLIYEYMERGSLFCVLRNDVE----AVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNS---NLEAF 653 (764)
Q Consensus 581 ~~~lv~e~~~~~~L~~~l~~~~~----~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~---~~~~k 653 (764)
..++||||+++++|.+++..... ...+++..+..++.|++.||.||| ++||+||||||+||+++. +..+|
T Consensus 107 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~i~H~dlkp~NIli~~~~~~~~~k 183 (327)
T 2yfx_A 107 PRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAK 183 (327)
T ss_dssp SCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEE
T ss_pred CcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHh---hCCeecCcCCHhHEEEecCCCcceEE
Confidence 99999999999999999975422 245889999999999999999999 899999999999999984 44699
Q ss_pred EeeeccccccCCCC--CCceecccccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCccccccc----ccCCc
Q 004268 654 VADFGLARLLHPDS--SNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLM-GSHPTDLLSSLSS----SSGRK 726 (764)
Q Consensus 654 l~Dfg~~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~llt-g~~Pf~~~~~~~~----~~~~~ 726 (764)
|+|||.+....... .......+++.|+|||++.+..++.++||||+|+++|+|+| |+.||........ .....
T Consensus 184 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~ 263 (327)
T 2yfx_A 184 IGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGR 263 (327)
T ss_dssp ECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCC
T ss_pred ECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHHHhcCCC
Confidence 99999997653322 12233567889999999999999999999999999999998 9999986654221 11222
Q ss_pred CCCCCCCcHHHHHHHhhhhccch
Q 004268 727 ISQNPRLDLQCNAYLKNFSQGNH 749 (764)
Q Consensus 727 ~~~~~~~~~~~~~~~~~~l~~~~ 749 (764)
.......+..+.++++.|++.++
T Consensus 264 ~~~~~~~~~~l~~li~~~l~~dp 286 (327)
T 2yfx_A 264 MDPPKNCPGPVYRIMTQCWQHQP 286 (327)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSG
T ss_pred CCCCCCCCHHHHHHHHHHhcCCh
Confidence 33455678899999999999873
No 244
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=2.5e-35 Score=304.66 Aligned_cols=238 Identities=24% Similarity=0.384 Sum_probs=186.7
Q ss_pred hhcCCcceeeeecCceeEEEEEEC--CCC--EEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEE
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLS--SGK--LVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCM 582 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~--~~~--~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 582 (764)
.++|++.+.||+|+||+||+|.+. +++ .||+|++...........+.+.+|++++++++||||+++++++.... .
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~ 95 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M 95 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence 478999999999999999999753 333 68999987765544555688999999999999999999999998765 8
Q ss_pred EEEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeeccccc
Q 004268 583 FLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLARL 662 (764)
Q Consensus 583 ~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~ 662 (764)
++||||+++++|.+++... ...+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||.+..
T Consensus 96 ~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~ 170 (291)
T 1u46_A 96 KMVTELAPLGSLLDRLRKH--QGHFLLGTLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRA 170 (291)
T ss_dssp EEEEECCTTCBHHHHHHHH--GGGSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTCEE
T ss_pred eeeEecccCCCHHHHHHhc--cCCcCHHHHHHHHHHHHHHHHHHH---hCCcccCCCchheEEEcCCCCEEEcccccccc
Confidence 8999999999999999742 345889999999999999999999 88999999999999999999999999999987
Q ss_pred cCCCCCC---ceecccccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccccccc-----cCCcCCCCCCC
Q 004268 663 LHPDSSN---RTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLM-GSHPTDLLSSLSSS-----SGRKISQNPRL 733 (764)
Q Consensus 663 ~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~llt-g~~Pf~~~~~~~~~-----~~~~~~~~~~~ 733 (764)
....... .....++..|+|||++.+..++.++||||+|+++|+|++ |+.||.+....... ...........
T Consensus 171 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (291)
T 1u46_A 171 LPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDC 250 (291)
T ss_dssp CCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCCCCCCCTTC
T ss_pred ccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHHHHHccCCCCCCCcCc
Confidence 6543322 123456778999999998889999999999999999999 99999876542211 11223344567
Q ss_pred cHHHHHHHhhhhccchh
Q 004268 734 DLQCNAYLKNFSQGNHR 750 (764)
Q Consensus 734 ~~~~~~~~~~~l~~~~~ 750 (764)
+..+.++++.|++.++.
T Consensus 251 ~~~l~~li~~~l~~~p~ 267 (291)
T 1u46_A 251 PQDIYNVMVQCWAHKPE 267 (291)
T ss_dssp CHHHHHHHHHHTCSSGG
T ss_pred CHHHHHHHHHHccCCcc
Confidence 88999999999998743
No 245
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=2.2e-35 Score=307.23 Aligned_cols=238 Identities=22% Similarity=0.307 Sum_probs=190.8
Q ss_pred HhhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCc-HHHHHHHHHHHHHHHhcCCCceeeEeeEEe--eCCE
Q 004268 506 ATEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEE-PAFLESFQTEARLLSQIRHRNIVKLYGFCL--HNKC 581 (764)
Q Consensus 506 ~~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~--~~~~ 581 (764)
..++|++.+.||+|+||.||+|... +++.||+|++....... ....+.+.+|++++++++||||+++++++. +...
T Consensus 3 l~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (305)
T 2wtk_C 3 LIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQK 82 (305)
T ss_dssp --CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---C
T ss_pred cccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCe
Confidence 4578999999999999999999864 78999999987543211 123477899999999999999999999984 4557
Q ss_pred EEEEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeecccc
Q 004268 582 MFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLAR 661 (764)
Q Consensus 582 ~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~ 661 (764)
.++||||++++ +.+++... ....+++..+..++.||+.||+||| ++||+||||||+||+++.++.+||+|||.+.
T Consensus 83 ~~lv~e~~~~~-l~~~~~~~-~~~~~~~~~~~~~~~qi~~al~~LH---~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~ 157 (305)
T 2wtk_C 83 MYMVMEYCVCG-MQEMLDSV-PEKRFPVCQAHGYFCQLIDGLEYLH---SQGIVHKDIKPGNLLLTTGGTLKISALGVAE 157 (305)
T ss_dssp EEEEEECCSEE-HHHHHHHS-TTCSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred EEEEehhccCC-HHHHHHhC-cccccCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCcccEEEcCCCcEEeecccccc
Confidence 89999999976 77777643 3456899999999999999999999 8899999999999999999999999999998
Q ss_pred ccCCCC--CCceecccccccccccccccCC--CCccchHHHHHHHHHHHHhCCCCCCccccccc---ccCCcCCCCCCCc
Q 004268 662 LLHPDS--SNRTLVVGTYGYIAPELAYTMA--VTEKCDVYSFGVVALEVLMGSHPTDLLSSLSS---SSGRKISQNPRLD 734 (764)
Q Consensus 662 ~~~~~~--~~~~~~~g~~~y~aPE~~~~~~--~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~---~~~~~~~~~~~~~ 734 (764)
...... .......|++.|+|||++.+.. ++.++||||+|+++|+|++|+.||.+...... ........+...+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~ 237 (305)
T 2wtk_C 158 ALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYAIPGDCG 237 (305)
T ss_dssp ECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCCSSSC
T ss_pred ccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHHhcCCCCCCCccC
Confidence 765322 2223456899999999987654 37799999999999999999999987553221 1112233445678
Q ss_pred HHHHHHHhhhhccc
Q 004268 735 LQCNAYLKNFSQGN 748 (764)
Q Consensus 735 ~~~~~~~~~~l~~~ 748 (764)
..+.+++++|++.+
T Consensus 238 ~~l~~li~~~l~~d 251 (305)
T 2wtk_C 238 PPLSDLLKGMLEYE 251 (305)
T ss_dssp HHHHHHHHHHTCSS
T ss_pred HHHHHHHHHHccCC
Confidence 89999999999987
No 246
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=7.3e-35 Score=308.03 Aligned_cols=236 Identities=22% Similarity=0.317 Sum_probs=176.2
Q ss_pred hhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcC-CCceeeEeeEEe-------
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIR-HRNIVKLYGFCL------- 577 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~------- 577 (764)
..+|++.+.||+|+||.||+|++. +++.||+|++.... ....+.+.+|+.+++++. ||||+++++++.
T Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~ 103 (337)
T 3ll6_A 27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNE---EEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESD 103 (337)
T ss_dssp TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESS---HHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTST
T ss_pred CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCc---hHHHHHHHHHHHHHHHhccCCChhhccccccccccccc
Confidence 458999999999999999999864 78999999985543 333467889999999996 999999999983
Q ss_pred -eCCEEEEEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCC--cEEcCCCCCCeeecCCCCEEE
Q 004268 578 -HNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPS--IVHRDISSNNILLNSNLEAFV 654 (764)
Q Consensus 578 -~~~~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~--iiH~Dlkp~NIll~~~~~~kl 654 (764)
.....++||||++ |+|.+++........+++..+..++.||+.||+||| ++| |+||||||+||+++.++.+||
T Consensus 104 ~~~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~~~ivH~Dikp~NIl~~~~~~~kl 179 (337)
T 3ll6_A 104 TGQAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMH---RQKPPIIHRDLKVENLLLSNQGTIKL 179 (337)
T ss_dssp TSSEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHH---TSSSCCBCCCCCGGGCEECTTSCEEB
T ss_pred cCCceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---hCCCCEEEccCCcccEEECCCCCEEE
Confidence 4456899999997 689888875444556999999999999999999999 888 999999999999999999999
Q ss_pred eeeccccccCCCCCC------------ceeccccccccccccc---ccCCCCccchHHHHHHHHHHHHhCCCCCCccccc
Q 004268 655 ADFGLARLLHPDSSN------------RTLVVGTYGYIAPELA---YTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSL 719 (764)
Q Consensus 655 ~Dfg~~~~~~~~~~~------------~~~~~g~~~y~aPE~~---~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~ 719 (764)
+|||.+......... .....|++.|+|||++ .+..++.++||||+|+++|+|++|+.||......
T Consensus 180 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~ 259 (337)
T 3ll6_A 180 CDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKL 259 (337)
T ss_dssp CCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC------
T ss_pred ecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHH
Confidence 999999876533221 1134689999999998 5667899999999999999999999999876554
Q ss_pred ccccC-CcCCCCCCCcHHHHHHHhhhhccch
Q 004268 720 SSSSG-RKISQNPRLDLQCNAYLKNFSQGNH 749 (764)
Q Consensus 720 ~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~ 749 (764)
..... .........+..+.++++.|++.++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p 290 (337)
T 3ll6_A 260 RIVNGKYSIPPHDTQYTVFHSLIRAMLQVNP 290 (337)
T ss_dssp ------CCCCTTCCSSGGGHHHHHHHSCSSG
T ss_pred HhhcCcccCCcccccchHHHHHHHHHccCCh
Confidence 33322 2233345567789999999999873
No 247
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=1.1e-35 Score=332.31 Aligned_cols=237 Identities=27% Similarity=0.437 Sum_probs=197.6
Q ss_pred HhhcCCcceeeeecCceeEEEEEECCCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEEEEE
Q 004268 506 ATEDFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFLI 585 (764)
Q Consensus 506 ~~~~y~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 585 (764)
..++|++.+.||+|+||+||+|.+..+..||||++...... .+.+.+|++++++++||||+++++++.+ +..++|
T Consensus 265 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~----~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv 339 (535)
T 2h8h_A 265 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS----PEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV 339 (535)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSSC----HHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEE
T ss_pred chhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCCCC----HHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEe
Confidence 35789999999999999999999987888999999865543 2678899999999999999999999876 668999
Q ss_pred EEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeeccccccCC
Q 004268 586 YEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLARLLHP 665 (764)
Q Consensus 586 ~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 665 (764)
|||+++|+|.++++.. ....+++..+..++.||+.||+||| ++||+||||||+|||++.++.+||+|||+++....
T Consensus 340 ~e~~~~gsL~~~l~~~-~~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 415 (535)
T 2h8h_A 340 TEYMSKGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIED 415 (535)
T ss_dssp ECCCTTEEHHHHHSHH-HHTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCC
T ss_pred eehhcCCcHHHHHhhc-CCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHhhEEEcCCCcEEEcccccceecCC
Confidence 9999999999999742 2235889999999999999999999 89999999999999999999999999999986542
Q ss_pred CCC-CceecccccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccccccc----cCCcCCCCCCCcHHHHH
Q 004268 666 DSS-NRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLM-GSHPTDLLSSLSSS----SGRKISQNPRLDLQCNA 739 (764)
Q Consensus 666 ~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~llt-g~~Pf~~~~~~~~~----~~~~~~~~~~~~~~~~~ 739 (764)
... ......++..|+|||++.+..++.++|||||||++|||++ |+.||.+....+.. ........+..+..+.+
T Consensus 416 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~ 495 (535)
T 2h8h_A 416 NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHD 495 (535)
T ss_dssp HHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHH
T ss_pred CceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHH
Confidence 210 1122346778999999999999999999999999999999 99999876543221 12233345567889999
Q ss_pred HHhhhhccchhh
Q 004268 740 YLKNFSQGNHRW 751 (764)
Q Consensus 740 ~~~~~l~~~~~~ 751 (764)
++++||+.+..-
T Consensus 496 li~~cl~~dP~~ 507 (535)
T 2h8h_A 496 LMCQCWRKEPEE 507 (535)
T ss_dssp HHHHHTCSSGGG
T ss_pred HHHHHcCCChhH
Confidence 999999988433
No 248
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=2.3e-35 Score=304.76 Aligned_cols=236 Identities=20% Similarity=0.312 Sum_probs=178.7
Q ss_pred hhcCCcceeeeecCceeEEEEEE-CCCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEEEEE
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQL-SSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFLI 585 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 585 (764)
.++|++.+.||+|+||+||+|+. .+|+.||+|++....... ...+.+.++...++.++||||+++++++.+.+..++|
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv 84 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQ-EQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC 84 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHH-HHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcH-HHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEE
Confidence 57899999999999999999986 478999999997654332 2234455555567888999999999999999999999
Q ss_pred EEecCCCCHHHHHhcC-ccccccCHHHHHHHHHHHHHHHHHHHhcCCC-CcEEcCCCCCCeeecCCCCEEEeeecccccc
Q 004268 586 YEYMERGSLFCVLRND-VEAVELDWTKRVNIVKSMAHALSYLHYDCKP-SIVHRDISSNNILLNSNLEAFVADFGLARLL 663 (764)
Q Consensus 586 ~e~~~~~~L~~~l~~~-~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~-~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~ 663 (764)
|||+++ +|.+++... .....+++..++.++.|++.||+||| ++ ||+||||||+||+++.++.+||+|||.+...
T Consensus 85 ~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 160 (290)
T 3fme_A 85 MELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH---SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYL 160 (290)
T ss_dssp EECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HHSCCCCCCCSGGGCEECTTCCEEBCCC------
T ss_pred Eehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeecCCcccc
Confidence 999985 887776532 13456899999999999999999999 77 9999999999999999999999999999876
Q ss_pred CCCCCCceeccccccccccccc----ccCCCCccchHHHHHHHHHHHHhCCCCCCccccccc------ccCCcCCCCCCC
Q 004268 664 HPDSSNRTLVVGTYGYIAPELA----YTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSS------SSGRKISQNPRL 733 (764)
Q Consensus 664 ~~~~~~~~~~~g~~~y~aPE~~----~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~------~~~~~~~~~~~~ 733 (764)
.... ......|++.|+|||++ .+..++.++||||+|+++|+|++|+.||........ ............
T Consensus 161 ~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (290)
T 3fme_A 161 VDDV-AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKF 239 (290)
T ss_dssp ----------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCCCCCTTTS
T ss_pred cccc-cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhccCCCCcccccC
Confidence 5332 22334789999999996 566789999999999999999999999985332111 111122223457
Q ss_pred cHHHHHHHhhhhccc
Q 004268 734 DLQCNAYLKNFSQGN 748 (764)
Q Consensus 734 ~~~~~~~~~~~l~~~ 748 (764)
+..+.++++.|++.+
T Consensus 240 ~~~~~~li~~~l~~~ 254 (290)
T 3fme_A 240 SAEFVDFTSQCLKKN 254 (290)
T ss_dssp CHHHHHHHHHHTCSS
T ss_pred CHHHHHHHHHHhhcC
Confidence 889999999999988
No 249
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=1.5e-35 Score=307.18 Aligned_cols=232 Identities=18% Similarity=0.280 Sum_probs=186.1
Q ss_pred HhhcCCcceeeeecCceeEEEEEE-CCCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEee-EEeeCCEEE
Q 004268 506 ATEDFHIKYCIGTGGYGSVYRAQL-SSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG-FCLHNKCMF 583 (764)
Q Consensus 506 ~~~~y~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~-~~~~~~~~~ 583 (764)
..++|++.+.||+|+||+||+|.+ .+++.||+|++...... +.+.+|+++++.++|++++..+. ++...+..+
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-----~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~ 81 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH-----PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNV 81 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---C-----CCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccc-----hHHHHHHHHHHHhcCCCCCCeeeeecCCCCceE
Confidence 468899999999999999999986 57899999987654433 45778999999998877665555 456778899
Q ss_pred EEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeee---cCCCCEEEeeeccc
Q 004268 584 LIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILL---NSNLEAFVADFGLA 660 (764)
Q Consensus 584 lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll---~~~~~~kl~Dfg~~ 660 (764)
+||||+ +++|.+++... ...+++..+..++.|++.||+||| ++||+||||||+||++ +.++.+||+|||.+
T Consensus 82 lv~e~~-~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a 155 (296)
T 4hgt_A 82 MVMELL-GPSLEDLFNFC--SRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLA 155 (296)
T ss_dssp EEEECC-CCBHHHHHHHT--TSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECCGGGTTCEEECCCTTC
T ss_pred EEEEcc-CCCHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeeeeccCCCCeEEEecCccc
Confidence 999999 88999998742 345899999999999999999999 8999999999999999 78899999999999
Q ss_pred cccCCCCC-------CceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccccccccCC------cC
Q 004268 661 RLLHPDSS-------NRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSSSSGR------KI 727 (764)
Q Consensus 661 ~~~~~~~~-------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~~~~~------~~ 727 (764)
........ ......|++.|+|||++.+..++.++||||+||++|+|++|+.||.+.......... ..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 235 (296)
T 4hgt_A 156 KKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKM 235 (296)
T ss_dssp EECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHH
T ss_pred eeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccc
Confidence 87654322 223457899999999999999999999999999999999999999876543221110 11
Q ss_pred CC-----CCCCcHHHHHHHhhhhccc
Q 004268 728 SQ-----NPRLDLQCNAYLKNFSQGN 748 (764)
Q Consensus 728 ~~-----~~~~~~~~~~~~~~~l~~~ 748 (764)
.. ...++..+.++++.|++.+
T Consensus 236 ~~~~~~~~~~~~~~l~~li~~~l~~~ 261 (296)
T 4hgt_A 236 STPIEVLCKGYPSEFATYLNFCRSLR 261 (296)
T ss_dssp HSCHHHHTTTSCHHHHHHHHHHHTSC
T ss_pred cchhhhhhccCCHHHHHHHHHHHhcC
Confidence 11 2456888999999999877
No 250
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=5.9e-35 Score=300.97 Aligned_cols=236 Identities=25% Similarity=0.408 Sum_probs=195.6
Q ss_pred HHhhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEEE
Q 004268 505 EATEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCMF 583 (764)
Q Consensus 505 ~~~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 583 (764)
...++|++.+.||+|+||+||+|... +++.||+|++....... ...+.+.+|++++++++||||+++++++.+.+..+
T Consensus 19 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 97 (287)
T 2wei_A 19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKN-KDTSTILREVELLKKLDHPNIMKLFEILEDSSSFY 97 (287)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSS-SCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred HHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccch-HHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEE
Confidence 45689999999999999999999875 79999999986544322 12367889999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCC---CCEEEeeeccc
Q 004268 584 LIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSN---LEAFVADFGLA 660 (764)
Q Consensus 584 lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~---~~~kl~Dfg~~ 660 (764)
+||||+++++|.+++.. ...+++..+..++.|++.||+||| ++||+||||||+||+++.+ +.+||+|||.+
T Consensus 98 lv~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~ 171 (287)
T 2wei_A 98 IVGELYTGGELFDEIIK---RKRFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLS 171 (287)
T ss_dssp EEECCCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEECSTTGG
T ss_pred EEEEccCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCChhhEEEecCCCcccEEEeccCcc
Confidence 99999999999998863 346899999999999999999999 8899999999999999754 47999999999
Q ss_pred cccCCCCCCceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCccccccccc-------CCcCCCCCCC
Q 004268 661 RLLHPDSSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSSSS-------GRKISQNPRL 733 (764)
Q Consensus 661 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~~~-------~~~~~~~~~~ 733 (764)
....... ......+++.|+|||++.+ .++.++||||+|+++|+|++|+.||.+........ .........+
T Consensus 172 ~~~~~~~-~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (287)
T 2wei_A 172 TCFQQNT-KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTI 249 (287)
T ss_dssp GTBCCCS-SCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGGTTS
T ss_pred eeecCCC-ccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCchhhhhc
Confidence 8765332 2234568999999999876 48999999999999999999999998765432111 1111223467
Q ss_pred cHHHHHHHhhhhccch
Q 004268 734 DLQCNAYLKNFSQGNH 749 (764)
Q Consensus 734 ~~~~~~~~~~~l~~~~ 749 (764)
+..+.++++.|++.++
T Consensus 250 ~~~~~~li~~~l~~dp 265 (287)
T 2wei_A 250 SDDAKDLIRKMLTFHP 265 (287)
T ss_dssp CHHHHHHHHHHTCSSG
T ss_pred CHHHHHHHHHHcccCh
Confidence 8899999999998773
No 251
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=3.7e-35 Score=307.36 Aligned_cols=239 Identities=23% Similarity=0.349 Sum_probs=191.5
Q ss_pred hhcCCcceeeeecCceeEEEEEE-CCCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEee----CCE
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQL-SSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLH----NKC 581 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~----~~~ 581 (764)
.++|++.+.||+|+||.||+|.. .+++.||+|++.... ....+.+.+|+++++.++||||+++++++.. ...
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 104 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHE---QQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHE 104 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESS---HHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCC---HHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCce
Confidence 47899999999999999999986 579999999986532 3345788999999999999999999999873 447
Q ss_pred EEEEEEecCCCCHHHHHhcCc-cccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeeccc
Q 004268 582 MFLIYEYMERGSLFCVLRNDV-EAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLA 660 (764)
Q Consensus 582 ~~lv~e~~~~~~L~~~l~~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~ 660 (764)
.++||||+++++|.+++.... ....+++..++.++.|++.||+||| ++||+||||||+||+++.++.+||+|||.+
T Consensus 105 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~ 181 (317)
T 2buj_A 105 AWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIH---AKGYAHRDLKPTNILLGDEGQPVLMDLGSM 181 (317)
T ss_dssp EEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCSSC
T ss_pred eEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEcCCCCEEEEecCcc
Confidence 899999999999999987422 2346899999999999999999999 889999999999999999999999999998
Q ss_pred cccCCCCCC---------ceecccccccccccccccCC---CCccchHHHHHHHHHHHHhCCCCCCccccccc------c
Q 004268 661 RLLHPDSSN---------RTLVVGTYGYIAPELAYTMA---VTEKCDVYSFGVVALEVLMGSHPTDLLSSLSS------S 722 (764)
Q Consensus 661 ~~~~~~~~~---------~~~~~g~~~y~aPE~~~~~~---~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~------~ 722 (764)
......... .....|++.|+|||++.+.. ++.++||||+|+++|+|++|+.||........ .
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~ 261 (317)
T 2buj_A 182 NQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQ 261 (317)
T ss_dssp EESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHH
T ss_pred hhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhh
Confidence 765321111 11235689999999987654 68899999999999999999999975322111 1
Q ss_pred cCCcCCCCCCCcHHHHHHHhhhhccchhh
Q 004268 723 SGRKISQNPRLDLQCNAYLKNFSQGNHRW 751 (764)
Q Consensus 723 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 751 (764)
........+..+..+.++++.|++.++.-
T Consensus 262 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~ 290 (317)
T 2buj_A 262 NQLSIPQSPRHSSALWQLLNSMMTVDPHQ 290 (317)
T ss_dssp CC--CCCCTTSCHHHHHHHHHHTCSSGGG
T ss_pred ccCCCCccccCCHHHHHHHHHHhhcChhh
Confidence 12223344567899999999999988443
No 252
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=2.9e-35 Score=320.01 Aligned_cols=200 Identities=22% Similarity=0.317 Sum_probs=174.0
Q ss_pred hhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhc------CCCceeeEeeEEeeC
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQI------RHRNIVKLYGFCLHN 579 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l------~hpniv~~~~~~~~~ 579 (764)
..+|++.+.||+|+||+||+|.+. +++.||+|++... ....+.+.+|+++++.+ .|+||+++++++...
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~ 171 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE----KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFR 171 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC----HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEET
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc----cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccC
Confidence 568999999999999999999765 6899999998653 23346778899988888 477999999999999
Q ss_pred CEEEEEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCC--EEEeee
Q 004268 580 KCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLE--AFVADF 657 (764)
Q Consensus 580 ~~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~--~kl~Df 657 (764)
+..++||||+. ++|.+++... ....+++..++.++.||+.||+||| ++||+||||||+||+++.++. +||+||
T Consensus 172 ~~~~lv~e~~~-~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlKp~NILl~~~~~~~vkL~DF 246 (429)
T 3kvw_A 172 NHICMTFELLS-MNLYELIKKN-KFQGFSLPLVRKFAHSILQCLDALH---KNRIIHCDLKPENILLKQQGRSGIKVIDF 246 (429)
T ss_dssp TEEEEEECCCC-CBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHH---HHTEECSCCSGGGEEESSTTSCCEEECCC
T ss_pred CeEEEEEeccC-CCHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEEccCCCcceEEeec
Confidence 99999999997 5899988754 2335899999999999999999999 889999999999999999887 999999
Q ss_pred ccccccCCCCCCceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccc
Q 004268 658 GLARLLHPDSSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSS 718 (764)
Q Consensus 658 g~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~ 718 (764)
|++...... .....||+.|+|||++.+..++.++||||+||++|+|++|++||.+.+.
T Consensus 247 G~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~ 304 (429)
T 3kvw_A 247 GSSCYEHQR---VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDE 304 (429)
T ss_dssp TTCEETTCC---CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred ccceecCCc---ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCH
Confidence 999765432 2345789999999999999999999999999999999999999986543
No 253
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=2.6e-35 Score=305.36 Aligned_cols=231 Identities=18% Similarity=0.288 Sum_probs=190.0
Q ss_pred hhcCCcceeeeecCceeEEEEEE-CCCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEee-EEeeCCEEEE
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQL-SSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYG-FCLHNKCMFL 584 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~-~~~~~~~~~l 584 (764)
.++|++.+.||+|+||+||+|++ .+++.||+|++...... +.+.+|+++++.++|++++..+. +....+..++
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-----~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~l 82 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH-----PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVM 82 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSSC-----CHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcch-----hHHHHHHHHHHHhhcCCCCCccccccCCCCceEE
Confidence 57899999999999999999986 57999999998765543 45789999999999877555554 4567788999
Q ss_pred EEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeee---cCCCCEEEeeecccc
Q 004268 585 IYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILL---NSNLEAFVADFGLAR 661 (764)
Q Consensus 585 v~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll---~~~~~~kl~Dfg~~~ 661 (764)
||||+ +++|.+++... ...+++..+..++.|++.||+||| ++||+||||||+||++ +.++.+||+|||.+.
T Consensus 83 v~e~~-~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~ 156 (296)
T 3uzp_A 83 VMELL-GPSLEDLFNFC--SRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 156 (296)
T ss_dssp EEECC-CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECCGGGTTCEEECCCTTCE
T ss_pred EEEec-CCCHHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCcc
Confidence 99999 88999999742 345899999999999999999999 8999999999999999 488899999999998
Q ss_pred ccCCCCC-------CceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccccccccC------CcCC
Q 004268 662 LLHPDSS-------NRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSSSSG------RKIS 728 (764)
Q Consensus 662 ~~~~~~~-------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~~~~------~~~~ 728 (764)
....... ......|++.|+|||++.+..++.++||||+|+++|+|++|+.||.+......... ....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 236 (296)
T 3uzp_A 157 KYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMS 236 (296)
T ss_dssp ECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccC
Confidence 7654332 12345789999999999999999999999999999999999999987543221110 0111
Q ss_pred C-----CCCCcHHHHHHHhhhhccc
Q 004268 729 Q-----NPRLDLQCNAYLKNFSQGN 748 (764)
Q Consensus 729 ~-----~~~~~~~~~~~~~~~l~~~ 748 (764)
. .+..+..+.++++.|++.+
T Consensus 237 ~~~~~~~~~~~~~l~~li~~~l~~d 261 (296)
T 3uzp_A 237 TPIEVLCKGYPSEFATYLNFCRSLR 261 (296)
T ss_dssp SCHHHHTTTSCHHHHHHHHHHHTSC
T ss_pred CchHHHHhhCCHHHHHHHHHHHhcC
Confidence 1 2567889999999999877
No 254
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.9e-35 Score=302.00 Aligned_cols=236 Identities=25% Similarity=0.381 Sum_probs=190.6
Q ss_pred hcCCcceeeeecCceeEEEEEEC-CCC---EEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEE-
Q 004268 508 EDFHIKYCIGTGGYGSVYRAQLS-SGK---LVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCM- 582 (764)
Q Consensus 508 ~~y~~~~~ig~G~~g~V~~~~~~-~~~---~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~- 582 (764)
-.|.+.+.||+|+||+||+|.+. +++ .||+|.+.... .....+.+.+|++++++++||||+++++++.+.+..
T Consensus 21 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 98 (298)
T 3pls_A 21 VVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRIT--EMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLP 98 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCC--SHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCC
T ss_pred eEEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccc--cHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCc
Confidence 35667799999999999999743 333 79999987543 334457889999999999999999999999876654
Q ss_pred EEEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeeccccc
Q 004268 583 FLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLARL 662 (764)
Q Consensus 583 ~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~ 662 (764)
++||||+.+++|.+++.. ....+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||.+..
T Consensus 99 ~~v~e~~~~~~L~~~~~~--~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~ 173 (298)
T 3pls_A 99 HVLLPYMCHGDLLQFIRS--PQRNPTVKDLISFGLQVARGMEYLA---EQKFVHRDLAARNCMLDESFTVKVADFGLARD 173 (298)
T ss_dssp EEEECCCTTCBHHHHHHC--TTCCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECCTTSSCT
T ss_pred EEEEecccCCCHHHHHhc--cccCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCcEEeCcCCCccc
Confidence 999999999999999975 2345788999999999999999999 88999999999999999999999999999976
Q ss_pred cCCC----CCCceecccccccccccccccCCCCccchHHHHHHHHHHHHhC-CCCCCcccccccc----cCCcCCCCCCC
Q 004268 663 LHPD----SSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMG-SHPTDLLSSLSSS----SGRKISQNPRL 733 (764)
Q Consensus 663 ~~~~----~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg-~~Pf~~~~~~~~~----~~~~~~~~~~~ 733 (764)
.... ........+++.|+|||.+.+..++.++||||+|+++|+|++| .+||......... .......+...
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (298)
T 3pls_A 174 ILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLPQPEYC 253 (298)
T ss_dssp TTTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHHTTCCCCCCTTC
T ss_pred ccCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhhcCCCCCCCccc
Confidence 5432 1222335678899999999999999999999999999999995 5556554443221 12233345557
Q ss_pred cHHHHHHHhhhhccchh
Q 004268 734 DLQCNAYLKNFSQGNHR 750 (764)
Q Consensus 734 ~~~~~~~~~~~l~~~~~ 750 (764)
+..+.++++.|++.++.
T Consensus 254 ~~~l~~li~~~l~~~p~ 270 (298)
T 3pls_A 254 PDSLYQVMQQCWEADPA 270 (298)
T ss_dssp CHHHHHHHHHHTCSSGG
T ss_pred hHHHHHHHHHHccCChh
Confidence 88999999999998733
No 255
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=5.5e-35 Score=331.20 Aligned_cols=233 Identities=24% Similarity=0.395 Sum_probs=189.1
Q ss_pred hcCCcce-eeeecCceeEEEEEEC---CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEEE
Q 004268 508 EDFHIKY-CIGTGGYGSVYRAQLS---SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCMF 583 (764)
Q Consensus 508 ~~y~~~~-~ig~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 583 (764)
+++.+.+ .||+|+||.||+|.++ ++..||||++....... ..+.+.+|++++++++||||+++++++.. +..+
T Consensus 335 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~--~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~ 411 (613)
T 2ozo_A 335 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKA--DTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALM 411 (613)
T ss_dssp TSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSST--THHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEE
T ss_pred cceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChH--HHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeE
Confidence 4455555 7999999999999753 46679999997654332 24788999999999999999999999976 5589
Q ss_pred EEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeecccccc
Q 004268 584 LIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLARLL 663 (764)
Q Consensus 584 lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~ 663 (764)
+||||+++|+|.+++... ...+++..+..++.||+.||+||| ++||+||||||+||+++.++.+||+|||+++..
T Consensus 412 lv~E~~~~g~L~~~l~~~--~~~l~~~~~~~i~~qi~~~L~~LH---~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~ 486 (613)
T 2ozo_A 412 LVMEMAGGGPLHKFLVGK--REEIPVSNVAELLHQVSMGMKYLE---EKNFVHRNLAARNVLLVNRHYAKISDFGLSKAL 486 (613)
T ss_dssp EEEECCTTCBHHHHHTTC--TTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCSTTTTC
T ss_pred EEEEeCCCCcHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHH---HCCEEcCcCCHHHEEEcCCCcEEEeeccCcccc
Confidence 999999999999999643 345899999999999999999999 899999999999999999999999999999876
Q ss_pred CCCCCC---ceecccccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccccccc----cCCcCCCCCCCcH
Q 004268 664 HPDSSN---RTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLM-GSHPTDLLSSLSSS----SGRKISQNPRLDL 735 (764)
Q Consensus 664 ~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~llt-g~~Pf~~~~~~~~~----~~~~~~~~~~~~~ 735 (764)
...... .....+++.|+|||++.+..++.++|||||||++|||++ |+.||.+....+.. .......++..+.
T Consensus 487 ~~~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~ 566 (613)
T 2ozo_A 487 GADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPP 566 (613)
T ss_dssp C--------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHHHTTCCCCCCTTCCH
T ss_pred cCCCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCCCcCCH
Confidence 433221 122345688999999999999999999999999999998 99999876653321 2233344566789
Q ss_pred HHHHHHhhhhccc
Q 004268 736 QCNAYLKNFSQGN 748 (764)
Q Consensus 736 ~~~~~~~~~l~~~ 748 (764)
.+.++++.||+.+
T Consensus 567 ~l~~li~~cl~~d 579 (613)
T 2ozo_A 567 ELYALMSDCWIYK 579 (613)
T ss_dssp HHHHHHHHTTCSS
T ss_pred HHHHHHHHHcCCC
Confidence 9999999999877
No 256
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=5.7e-35 Score=311.78 Aligned_cols=211 Identities=23% Similarity=0.316 Sum_probs=163.2
Q ss_pred HHHHHHhhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeC
Q 004268 501 EEMIEATEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHN 579 (764)
Q Consensus 501 ~~~~~~~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~ 579 (764)
.......++|++.+.||+|+||+||+|++. +|+.||+|++....... ....+|++.++.++||||+++++++...
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~----~~~~~~~~~l~~l~h~niv~~~~~~~~~ 91 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFR----NRELQIMQDLAVLHHPNIVQLQSYFYTL 91 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTTCC----CHHHHHHHHHHHHCCTTBCCEEEEEEEE
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCcccc----HHHHHHHHHHHhcCCCCcccHHHhhhcc
Confidence 445667899999999999999999999865 78999999986654332 4556778888999999999999998653
Q ss_pred C-------EEEEEEEecCCCCHHHHHh-cCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecC-CC
Q 004268 580 K-------CMFLIYEYMERGSLFCVLR-NDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNS-NL 650 (764)
Q Consensus 580 ~-------~~~lv~e~~~~~~L~~~l~-~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~-~~ 650 (764)
+ ..++||||++++ +...+. .......+++..+..++.|++.|+.|||.. ++||+||||||+||+++. ++
T Consensus 92 ~~~~~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-~~~ivH~Dlkp~NIll~~~~~ 169 (360)
T 3e3p_A 92 GERDRRDIYLNVVMEYVPDT-LHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLP-SVNVCHRDIKPHNVLVNEADG 169 (360)
T ss_dssp CSSCTTCEEEEEEEECCSCB-HHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTST-TTCCBCSCCCGGGEEEETTTT
T ss_pred ccccccceeEEEEeeccccc-HHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCC-CCCeecCcCCHHHEEEeCCCC
Confidence 3 388999999874 444332 222445688899999999999999999943 679999999999999996 89
Q ss_pred CEEEeeeccccccCCCCCCceecccccccccccccccCC-CCccchHHHHHHHHHHHHhCCCCCCcccc
Q 004268 651 EAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYTMA-VTEKCDVYSFGVVALEVLMGSHPTDLLSS 718 (764)
Q Consensus 651 ~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~-~~~~~DiwslG~il~~lltg~~Pf~~~~~ 718 (764)
.+||+|||++........ .....||+.|+|||++.+.. ++.++||||+||++|+|++|+.||.+...
T Consensus 170 ~~kl~Dfg~a~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~ 237 (360)
T 3e3p_A 170 TLKLCDFGSAKKLSPSEP-NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNS 237 (360)
T ss_dssp EEEECCCTTCBCCCTTSC-CCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred cEEEeeCCCceecCCCCC-cccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCCh
Confidence 999999999987654332 33457899999999987654 89999999999999999999999987543
No 257
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.9e-34 Score=304.89 Aligned_cols=239 Identities=27% Similarity=0.383 Sum_probs=184.8
Q ss_pred CHHHHHHHhhcCCcceeeeecCceeEEEEEECCCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhc--CCCceeeEeeEE
Q 004268 499 TFEEMIEATEDFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQI--RHRNIVKLYGFC 576 (764)
Q Consensus 499 ~~~~~~~~~~~y~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l--~hpniv~~~~~~ 576 (764)
+........++|++.+.||+|+||+||+|++. ++.||+|++.... .....+|.+++... +||||+++++++
T Consensus 28 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~------~~~~~~e~~~~~~~~~~h~~i~~~~~~~ 100 (337)
T 3mdy_A 28 PLLVQRTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTE------EASWFRETEIYQTVLMRHENILGFIAAD 100 (337)
T ss_dssp CHHHHTTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGG------HHHHHHHHHHHTSTTCCCTTBCCEEEEE
T ss_pred CcccccccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEeccc------cchhhhHHHHHHHHhhcCCCeeeEEEEE
Confidence 33444456789999999999999999999886 8999999985432 13445566666554 899999999999
Q ss_pred eeC----CEEEEEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCC--------CcEEcCCCCCCe
Q 004268 577 LHN----KCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKP--------SIVHRDISSNNI 644 (764)
Q Consensus 577 ~~~----~~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~--------~iiH~Dlkp~NI 644 (764)
... ...++||||+++|+|.++++.. .+++..+..++.|++.||+||| ++ ||+||||||+||
T Consensus 101 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH---~~~~~~~~~~~ivH~Dikp~Ni 173 (337)
T 3mdy_A 101 IKGTGSWTQLYLITDYHENGSLYDYLKST----TLDAKSMLKLAYSSVSGLCHLH---TEIFSTQGKPAIAHRDLKSKNI 173 (337)
T ss_dssp EESCGGGCEEEEEECCCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHH---SCBCSTTCBCCEECSCCCGGGE
T ss_pred ccCCCCCCceEEEEeccCCCcHHHHhhcc----CCCHHHHHHHHHHHHHHHHHHH---HhhhhhccCCCEEecccchHHE
Confidence 887 7899999999999999999642 5899999999999999999999 77 999999999999
Q ss_pred eecCCCCEEEeeeccccccCCCCCC----ceecccccccccccccccCCCCcc------chHHHHHHHHHHHHhC-----
Q 004268 645 LLNSNLEAFVADFGLARLLHPDSSN----RTLVVGTYGYIAPELAYTMAVTEK------CDVYSFGVVALEVLMG----- 709 (764)
Q Consensus 645 ll~~~~~~kl~Dfg~~~~~~~~~~~----~~~~~g~~~y~aPE~~~~~~~~~~------~DiwslG~il~~lltg----- 709 (764)
+++.++.+||+|||.+......... .....||+.|+|||++.+..++.+ +||||+||++|||+||
T Consensus 174 ll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~ 253 (337)
T 3mdy_A 174 LVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGG 253 (337)
T ss_dssp EECTTSCEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTT
T ss_pred EECCCCCEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCccc
Confidence 9999999999999999776433222 123578999999999988776665 9999999999999999
Q ss_pred -----CCCCCcccccccc---------cCCcCCCCC------CCcHHHHHHHhhhhccchhh
Q 004268 710 -----SHPTDLLSSLSSS---------SGRKISQNP------RLDLQCNAYLKNFSQGNHRW 751 (764)
Q Consensus 710 -----~~Pf~~~~~~~~~---------~~~~~~~~~------~~~~~~~~~~~~~l~~~~~~ 751 (764)
+.||......... ........+ ..+..+.+++++|++.++.-
T Consensus 254 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~ 315 (337)
T 3mdy_A 254 IVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPAS 315 (337)
T ss_dssp BCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGG
T ss_pred ccccccccHhhhcCCCCchhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhh
Confidence 6677654322110 001111111 23445778899999877433
No 258
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.6e-35 Score=311.86 Aligned_cols=229 Identities=20% Similarity=0.256 Sum_probs=187.2
Q ss_pred hhcCCcceeeeecCceeEEEEEECC---------CCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceee------
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLSS---------GKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVK------ 571 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~------ 571 (764)
.++|++.+.||+|+||+||+|+... ++.||+|++... +.+.+|++++++++||||++
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~--------~~~~~E~~~l~~l~h~niv~~~~~~~ 112 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD--------GRLFNEQNFFQRAAKPLQVNKWKKLY 112 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT--------STHHHHHHHHHHHCCHHHHHHHHHHT
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc--------chHHHHHHHHHHhcccchhhhhhhhc
Confidence 4789999999999999999998653 789999998754 35678999999999999887
Q ss_pred ---------EeeEEee-CCEEEEEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCC
Q 004268 572 ---------LYGFCLH-NKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISS 641 (764)
Q Consensus 572 ---------~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp 641 (764)
+++++.. +...++||||+ +++|.+++... ....+++..+..++.||+.||+||| ++||+||||||
T Consensus 113 ~~~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~-~~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dikp 187 (352)
T 2jii_A 113 STPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVS-PKHVLSERSVLQVACRLLDALEFLH---ENEYVHGNVTA 187 (352)
T ss_dssp TCTTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHS-GGGCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCCG
T ss_pred cCCccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhC-CcCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCH
Confidence 5677766 77899999999 89999999853 2356999999999999999999999 88999999999
Q ss_pred CCeeecCCC--CEEEeeeccccccCCCCC-------CceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCC
Q 004268 642 NNILLNSNL--EAFVADFGLARLLHPDSS-------NRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHP 712 (764)
Q Consensus 642 ~NIll~~~~--~~kl~Dfg~~~~~~~~~~-------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~P 712 (764)
+||+++.++ .+||+|||+++....... ......|++.|+|||++.+..++.++||||+|+++|+|++|+.|
T Consensus 188 ~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p 267 (352)
T 2jii_A 188 ENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLP 267 (352)
T ss_dssp GGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCT
T ss_pred HHEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCC
Confidence 999999988 999999999987643221 12334789999999999999999999999999999999999999
Q ss_pred CCccccccccc----C------C----cCCCCCCCcHHHHHHHhhhhccc
Q 004268 713 TDLLSSLSSSS----G------R----KISQNPRLDLQCNAYLKNFSQGN 748 (764)
Q Consensus 713 f~~~~~~~~~~----~------~----~~~~~~~~~~~~~~~~~~~l~~~ 748 (764)
|.......... . . .......++..+.++++.|++.+
T Consensus 268 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~d 317 (352)
T 2jii_A 268 WTNCLPNTEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALT 317 (352)
T ss_dssp TGGGTTCHHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCC
T ss_pred cccCCcCHHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCC
Confidence 98764211000 0 0 00011246889999999999877
No 259
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=9.1e-35 Score=310.66 Aligned_cols=229 Identities=28% Similarity=0.395 Sum_probs=187.6
Q ss_pred hhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEE---
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCM--- 582 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~--- 582 (764)
.++|.+.+.||+|+||+||+|.+. +|+.||+|++..... .....+.+.+|+.+++.++||||+++++++...+..
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 119 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQ-SEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF 119 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTS-SHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEeccccc-chhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccc
Confidence 578999999999999999999865 789999999976543 344467888999999999999999999999877654
Q ss_pred ---EEEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeecc
Q 004268 583 ---FLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGL 659 (764)
Q Consensus 583 ---~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~ 659 (764)
++||||++ ++|.+++.. .+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||.
T Consensus 120 ~~~~lv~e~~~-~~l~~~~~~-----~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~ 190 (371)
T 4exu_A 120 YDFYLVMPFMQ-TDLQKIMGM-----EFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGL 190 (371)
T ss_dssp CCCEEEEECCC-EEHHHHTTS-----CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECSTTC
T ss_pred eeEEEEEcccc-ccHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCcCHHHeEECCCCCEEEEecCc
Confidence 99999998 588877642 3889999999999999999999 88999999999999999999999999999
Q ss_pred ccccCCCCCCceeccccccccccccccc-CCCCccchHHHHHHHHHHHHhCCCCCCcccccccccC--------------
Q 004268 660 ARLLHPDSSNRTLVVGTYGYIAPELAYT-MAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSSSSG-------------- 724 (764)
Q Consensus 660 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~~~~-------------- 724 (764)
++..... .....||+.|+|||++.+ ..++.++||||+||++|+|++|+.||.+.+..+....
T Consensus 191 a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 267 (371)
T 4exu_A 191 ARHADAE---MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQ 267 (371)
T ss_dssp C-----------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHT
T ss_pred ccccccC---cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHH
Confidence 9865432 234578999999999887 6789999999999999999999999987543111000
Q ss_pred --------------------CcCCCCCCCcHHHHHHHhhhhccc
Q 004268 725 --------------------RKISQNPRLDLQCNAYLKNFSQGN 748 (764)
Q Consensus 725 --------------------~~~~~~~~~~~~~~~~~~~~l~~~ 748 (764)
......+..+..+.+++++|++.+
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d 311 (371)
T 4exu_A 268 KLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELD 311 (371)
T ss_dssp TCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSC
T ss_pred HhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCC
Confidence 001113456889999999999987
No 260
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=3.2e-35 Score=318.30 Aligned_cols=202 Identities=27% Similarity=0.440 Sum_probs=157.5
Q ss_pred hhcCCc-ceeeeecCceeEEEEEEC---CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEee--CC
Q 004268 507 TEDFHI-KYCIGTGGYGSVYRAQLS---SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLH--NK 580 (764)
Q Consensus 507 ~~~y~~-~~~ig~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~--~~ 580 (764)
.+.|.+ .+.||+|+||+||+|+++ +++.||+|++...... ..+.+|++++++++||||+++++++.. ..
T Consensus 19 ~~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~~-----~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 93 (405)
T 3rgf_A 19 EDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGIS-----MSACREIALLRELKHPNVISLQKVFLSHADR 93 (405)
T ss_dssp HHHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSCC-----HHHHHHHHHHHHCCCTTBCCCCEEEEETTTT
T ss_pred hhhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCCC-----HHHHHHHHHHHhcCCCCeeeEeeEEecCCCC
Confidence 456776 457999999999999865 5789999999765443 567899999999999999999999954 67
Q ss_pred EEEEEEEecCCCCHHHHHhcCc------cccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeee----cCCC
Q 004268 581 CMFLIYEYMERGSLFCVLRNDV------EAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILL----NSNL 650 (764)
Q Consensus 581 ~~~lv~e~~~~~~L~~~l~~~~------~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll----~~~~ 650 (764)
..++||||+++ +|.+++.... ....+++..++.++.||+.||+||| ++||+||||||+||++ +.++
T Consensus 94 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivH~Dlkp~NIll~~~~~~~~ 169 (405)
T 3rgf_A 94 KVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERG 169 (405)
T ss_dssp EEEEEEECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECCSSTTTT
T ss_pred eEEEEEeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCEeCCCcCHHHeEEecCCCCCC
Confidence 89999999975 7877775321 2224899999999999999999999 8999999999999999 6788
Q ss_pred CEEEeeeccccccCCCC---CCceecccccccccccccccC-CCCccchHHHHHHHHHHHHhCCCCCCccc
Q 004268 651 EAFVADFGLARLLHPDS---SNRTLVVGTYGYIAPELAYTM-AVTEKCDVYSFGVVALEVLMGSHPTDLLS 717 (764)
Q Consensus 651 ~~kl~Dfg~~~~~~~~~---~~~~~~~g~~~y~aPE~~~~~-~~~~~~DiwslG~il~~lltg~~Pf~~~~ 717 (764)
.+||+|||+++...... ......+||+.|+|||++.+. .++.++||||+||++|+|++|++||.+..
T Consensus 170 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~ 240 (405)
T 3rgf_A 170 RVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 240 (405)
T ss_dssp CEEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC
T ss_pred cEEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCcc
Confidence 99999999998765322 222346789999999998874 58999999999999999999999997544
No 261
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=3.6e-35 Score=310.54 Aligned_cols=235 Identities=20% Similarity=0.340 Sum_probs=187.9
Q ss_pred hhcCCcceeeeecCceeEEEEEE-CCCCEEEEEEccCCCCCcHHHHHHHHHHHHH-HHhcCCCceeeEeeEEeeCCEEEE
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQL-SSGKLVALKKLHRSETEEPAFLESFQTEARL-LSQIRHRNIVKLYGFCLHNKCMFL 584 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~-l~~l~hpniv~~~~~~~~~~~~~l 584 (764)
.++|++.+.||+|+||+||+|.. .+|+.||||++........ ...+..|..+ ++.++||||+++++++.+.+..++
T Consensus 50 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~--~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~l 127 (340)
T 3an0_A 50 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQE--QKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWI 127 (340)
T ss_dssp SSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHH--HHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEE
T ss_pred hhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHH--HHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEE
Confidence 56899999999999999999986 4789999999976544332 3455556655 677899999999999999999999
Q ss_pred EEEecCCCCHHHHHhcCc-cccccCHHHHHHHHHHHHHHHHHHHhcCCC-CcEEcCCCCCCeeecCCCCEEEeeeccccc
Q 004268 585 IYEYMERGSLFCVLRNDV-EAVELDWTKRVNIVKSMAHALSYLHYDCKP-SIVHRDISSNNILLNSNLEAFVADFGLARL 662 (764)
Q Consensus 585 v~e~~~~~~L~~~l~~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~-~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~ 662 (764)
||||+++ +|.+++.... ....+++..+..++.||+.||+||| ++ ||+||||||+||+++.++.+||+|||++..
T Consensus 128 v~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH---~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~ 203 (340)
T 3an0_A 128 CMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH---SKLSVIHRDVKPSNVLINALGQVKMCDFGISGY 203 (340)
T ss_dssp EECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCSCCSTTEEECSTTCEEECCCSHHHH
T ss_pred EHHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeeCCCcee
Confidence 9999986 8988876321 3456899999999999999999999 76 999999999999999999999999999987
Q ss_pred cCCCCCCceeccccccccccccccc----CCCCccchHHHHHHHHHHHHhCCCCCCcccccc----cccC--CcCCCCCC
Q 004268 663 LHPDSSNRTLVVGTYGYIAPELAYT----MAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLS----SSSG--RKISQNPR 732 (764)
Q Consensus 663 ~~~~~~~~~~~~g~~~y~aPE~~~~----~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~----~~~~--~~~~~~~~ 732 (764)
.... .......|++.|+|||++.+ ..++.++||||+||++|+|++|+.||....... .... ........
T Consensus 204 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (340)
T 3an0_A 204 LVDS-VAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADK 282 (340)
T ss_dssp HSCH-HHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCCCCCGGG
T ss_pred cccc-cccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchHHHHHHHhcCCCCCCCccc
Confidence 6432 11223478999999999643 478999999999999999999999998643211 0001 11111223
Q ss_pred CcHHHHHHHhhhhccc
Q 004268 733 LDLQCNAYLKNFSQGN 748 (764)
Q Consensus 733 ~~~~~~~~~~~~l~~~ 748 (764)
++..+.+++++|++.+
T Consensus 283 ~~~~~~~li~~~l~~d 298 (340)
T 3an0_A 283 FSAEFVDFTSQCLKKN 298 (340)
T ss_dssp SCHHHHHHHHHHTCSS
T ss_pred CCHHHHHHHHHHccCC
Confidence 6788999999999987
No 262
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=1.7e-35 Score=313.29 Aligned_cols=235 Identities=19% Similarity=0.214 Sum_probs=183.2
Q ss_pred hhcCCcceeeeecCceeEEEEEEC----CCCEEEEEEccCCCCCcHH--------HHHHHHHHHHHHHhcCCCceeeEee
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLS----SGKLVALKKLHRSETEEPA--------FLESFQTEARLLSQIRHRNIVKLYG 574 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~--------~~~~~~~E~~~l~~l~hpniv~~~~ 574 (764)
.++|++.+.||+|+||+||+|... ++..||+|++......... ....+.+|+..++.++||||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 468999999999999999999865 5788999998765432111 0123567888899999999999999
Q ss_pred EEee----CCEEEEEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCC
Q 004268 575 FCLH----NKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNL 650 (764)
Q Consensus 575 ~~~~----~~~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~ 650 (764)
++.. ....|+||||+ +++|.+++... ..+++..+..++.||+.||+||| ++||+||||||+||+++.++
T Consensus 116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~ 188 (345)
T 2v62_A 116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQN---GTFKKSTVLQLGIRMLDVLEYIH---ENEYVHGDIKAANLLLGYKN 188 (345)
T ss_dssp EEEEESSSCEEEEEEEECE-EEEHHHHCBGG---GBCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEESSS
T ss_pred ccccccCCCcEEEEEEecc-CCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCcCHHHEEEccCC
Confidence 9988 77899999999 89999998743 37899999999999999999999 88999999999999999877
Q ss_pred --CEEEeeeccccccCCCC-------CCceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCccccccc
Q 004268 651 --EAFVADFGLARLLHPDS-------SNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSS 721 (764)
Q Consensus 651 --~~kl~Dfg~~~~~~~~~-------~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~ 721 (764)
.+||+|||+++.+.... .......|++.|+|||++.+..++.++||||+||++|+|++|+.||........
T Consensus 189 ~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~ 268 (345)
T 2v62_A 189 PDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPV 268 (345)
T ss_dssp TTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHH
T ss_pred CCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccH
Confidence 99999999998764321 112345789999999999999999999999999999999999999965322110
Q ss_pred c----cCCc----------CCCCCCCcHHHHHHHhhhhccc
Q 004268 722 S----SGRK----------ISQNPRLDLQCNAYLKNFSQGN 748 (764)
Q Consensus 722 ~----~~~~----------~~~~~~~~~~~~~~~~~~l~~~ 748 (764)
. .... .......+..+.++++.|++.+
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~d 309 (345)
T 2v62_A 269 AVQTAKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLA 309 (345)
T ss_dssp HHHHHHHHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCC
T ss_pred HHHHHHHhhcccccHHHHhhccccccHHHHHHHHHHHhhcC
Confidence 0 0000 0011267789999999999877
No 263
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=1.2e-34 Score=308.44 Aligned_cols=232 Identities=26% Similarity=0.391 Sum_probs=189.0
Q ss_pred hhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeC-----C
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHN-----K 580 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~-----~ 580 (764)
.++|++.+.||+|+||+||+|.+. +|+.||+|++.... .......+.+|++++++++||||+++++++... .
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 87 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFD--KPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFN 87 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCS--SHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCC
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccc--cchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccc
Confidence 578999999999999999999865 78999999996543 334456788999999999999999999988764 6
Q ss_pred EEEEEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeeccc
Q 004268 581 CMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLA 660 (764)
Q Consensus 581 ~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~ 660 (764)
..++||||++ ++|.+++.. ..+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||.+
T Consensus 88 ~~~lv~e~~~-~~L~~~~~~----~~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a 159 (353)
T 2b9h_A 88 EVYIIQELMQ-TDLHRVIST----QMLSDDHIQYFIYQTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLA 159 (353)
T ss_dssp CEEEEECCCS-EEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTC
T ss_pred eEEEEEeccC-ccHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEEcCCCcEEEEecccc
Confidence 7999999998 589988864 35899999999999999999999 889999999999999999999999999999
Q ss_pred cccCCCCCC----------ceeccccccccccccccc-CCCCccchHHHHHHHHHHHHhCCCCCCccccccccc------
Q 004268 661 RLLHPDSSN----------RTLVVGTYGYIAPELAYT-MAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSSSS------ 723 (764)
Q Consensus 661 ~~~~~~~~~----------~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~~~------ 723 (764)
......... .....||+.|+|||++.+ ..++.++||||+||++|+|++|+.||.+.+......
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~ 239 (353)
T 2b9h_A 160 RIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGII 239 (353)
T ss_dssp EECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHH
T ss_pred cccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHh
Confidence 876432211 122468999999998764 678999999999999999999999998754211000
Q ss_pred --------C---------------------CcCCCCCCCcHHHHHHHhhhhccc
Q 004268 724 --------G---------------------RKISQNPRLDLQCNAYLKNFSQGN 748 (764)
Q Consensus 724 --------~---------------------~~~~~~~~~~~~~~~~~~~~l~~~ 748 (764)
. ......+.++..+.+++++|++.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d 293 (353)
T 2b9h_A 240 GTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFD 293 (353)
T ss_dssp CCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSS
T ss_pred CCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcC
Confidence 0 000112467889999999999987
No 264
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=1.1e-34 Score=304.94 Aligned_cols=236 Identities=26% Similarity=0.350 Sum_probs=189.8
Q ss_pred HhhcCCcceeeeecCceeEEEEEE--CCCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhc---CCCceeeEeeEEe---
Q 004268 506 ATEDFHIKYCIGTGGYGSVYRAQL--SSGKLVALKKLHRSETEEPAFLESFQTEARLLSQI---RHRNIVKLYGFCL--- 577 (764)
Q Consensus 506 ~~~~y~~~~~ig~G~~g~V~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l---~hpniv~~~~~~~--- 577 (764)
..++|++.+.||+|+||+||+|++ .+|+.||+|++........ ....+.+|+.+++.+ +||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~-~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~ 87 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEG-MPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR 87 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTS-CBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEE
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCccccc-CCchhhHHHHHHHhhhccCCCCeEeeeeeeeecc
Confidence 458899999999999999999987 3688999999865432211 013455777777766 8999999999987
Q ss_pred --eCCEEEEEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEe
Q 004268 578 --HNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVA 655 (764)
Q Consensus 578 --~~~~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~ 655 (764)
.....++||||++ ++|.+++... ....+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+
T Consensus 88 ~~~~~~~~lv~e~~~-~~L~~~l~~~-~~~~~~~~~~~~~~~qi~~~l~~lH---~~gi~H~dlkp~Nili~~~~~~kl~ 162 (326)
T 1blx_A 88 TDRETKLTLVFEHVD-QDLTTYLDKV-PEPGVPTETIKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLA 162 (326)
T ss_dssp CSSEEEEEEEEECCS-CBHHHHHHHS-CTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEEC
T ss_pred cCCCceEEEEEecCC-CCHHHHHHhc-ccCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCCHHHeEEcCCCCEEEe
Confidence 5567999999998 5999998754 2335899999999999999999999 8899999999999999999999999
Q ss_pred eeccccccCCCCCCceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCccccccccc------------
Q 004268 656 DFGLARLLHPDSSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSSSS------------ 723 (764)
Q Consensus 656 Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~~~------------ 723 (764)
|||.+...... .......|++.|+|||++.+..++.++||||+|+++|+|++|+.||.+........
T Consensus 163 Dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~ 241 (326)
T 1blx_A 163 DFGLARIYSFQ-MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEE 241 (326)
T ss_dssp SCCSCCCCCGG-GGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGG
T ss_pred cCcccccccCC-CCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcc
Confidence 99999765422 22334578999999999999999999999999999999999999998654321100
Q ss_pred ------------------CCcCCCCCCCcHHHHHHHhhhhccc
Q 004268 724 ------------------GRKISQNPRLDLQCNAYLKNFSQGN 748 (764)
Q Consensus 724 ------------------~~~~~~~~~~~~~~~~~~~~~l~~~ 748 (764)
.......+.++..+.+++++|++.+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d 284 (326)
T 1blx_A 242 DWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFN 284 (326)
T ss_dssp GSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSS
T ss_pred cCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCC
Confidence 0001123557888999999999987
No 265
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=7.9e-35 Score=315.22 Aligned_cols=199 Identities=24% Similarity=0.336 Sum_probs=170.1
Q ss_pred hhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcC--------CCceeeEeeEEe
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIR--------HRNIVKLYGFCL 577 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~--------hpniv~~~~~~~ 577 (764)
.++|++.+.||+|+||+||+|+.. +++.||+|++... ....+.+.+|+++++.++ ||||+++++++.
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~ 111 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA----EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFK 111 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC----HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC----CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeeccee
Confidence 578999999999999999999754 7889999998643 234577889999999995 788999999987
Q ss_pred ----eCCEEEEEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCC-CcEEcCCCCCCeeecCCC--
Q 004268 578 ----HNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKP-SIVHRDISSNNILLNSNL-- 650 (764)
Q Consensus 578 ----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~-~iiH~Dlkp~NIll~~~~-- 650 (764)
.....++||||+. +++.+.+... ....+++..++.++.||+.||+||| ++ ||+||||||+|||++.++
T Consensus 112 ~~~~~~~~~~lv~e~~~-~~l~~~~~~~-~~~~~~~~~~~~i~~qi~~aL~~lH---~~~givHrDikp~NIll~~~~~~ 186 (397)
T 1wak_A 112 ISGVNGTHICMVFEVLG-HHLLKWIIKS-NYQGLPLPCVKKIIQQVLQGLDYLH---TKCRIIHTDIKPENILLSVNEQY 186 (397)
T ss_dssp EEETTEEEEEEEECCCC-CBHHHHHHHT-TTSCCCHHHHHHHHHHHHHHHHHHH---HTTCEECCCCSGGGEEECCCHHH
T ss_pred ecCCCCceEEEEEeccC-ccHHHHHHhc-ccCCCCHHHHHHHHHHHHHHHHHHH---HhCCEecCCCCHHHeeEeccchh
Confidence 5567999999995 5666665432 2345899999999999999999999 87 999999999999999775
Q ss_pred -----------------------------------------------CEEEeeeccccccCCCCCCceeccccccccccc
Q 004268 651 -----------------------------------------------EAFVADFGLARLLHPDSSNRTLVVGTYGYIAPE 683 (764)
Q Consensus 651 -----------------------------------------------~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE 683 (764)
.+||+|||.+...... .....||+.|+|||
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~---~~~~~gt~~y~aPE 263 (397)
T 1wak_A 187 IRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH---FTEDIQTRQYRSLE 263 (397)
T ss_dssp HHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC---SCSCCSCGGGCCHH
T ss_pred hhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc---CccCCCCCcccCCh
Confidence 7999999999876432 23357899999999
Q ss_pred ccccCCCCccchHHHHHHHHHHHHhCCCCCCccc
Q 004268 684 LAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLS 717 (764)
Q Consensus 684 ~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~ 717 (764)
++.+..++.++||||+||++|+|++|+.||...+
T Consensus 264 ~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~ 297 (397)
T 1wak_A 264 VLIGSGYNTPADIWSTACMAFELATGDYLFEPHS 297 (397)
T ss_dssp HHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCC
T ss_pred hhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCc
Confidence 9999999999999999999999999999998654
No 266
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=1.6e-34 Score=301.80 Aligned_cols=234 Identities=23% Similarity=0.380 Sum_probs=188.3
Q ss_pred HhhcCCcceeeeecCceeEEEEEECCCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcC--CCceeeEeeEEeeCCEEE
Q 004268 506 ATEDFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIR--HRNIVKLYGFCLHNKCMF 583 (764)
Q Consensus 506 ~~~~y~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~--hpniv~~~~~~~~~~~~~ 583 (764)
..++|++.+.||+|+||.||+|...+++.||+|++...... ....+.+.+|++++++++ ||||+++++++...+..+
T Consensus 26 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~ 104 (313)
T 3cek_A 26 KGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEAD-NQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIY 104 (313)
T ss_dssp TTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCC-HHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEE
T ss_pred ccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEecccccc-ccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEE
Confidence 45789999999999999999999888999999999765443 344578899999999997 599999999999999999
Q ss_pred EEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeecccccc
Q 004268 584 LIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLARLL 663 (764)
Q Consensus 584 lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~ 663 (764)
+||| +.+++|.+++.. ...+++..+..++.|++.||+||| ++||+||||||+||++++ +.+||+|||.+...
T Consensus 105 lv~e-~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~ 176 (313)
T 3cek_A 105 MVME-CGNIDLNSWLKK---KKSIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIVD-GMLKLIDFGIANQM 176 (313)
T ss_dssp EEEC-CCSEEHHHHHHH---CSSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEET-TEEEECCCSSSCC-
T ss_pred EEEe-cCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcccEEEEC-CeEEEeeccccccc
Confidence 9999 567899999974 346889999999999999999999 889999999999999965 89999999999876
Q ss_pred CCCCC--Cceeccccccccccccccc-----------CCCCccchHHHHHHHHHHHHhCCCCCCccccccc------ccC
Q 004268 664 HPDSS--NRTLVVGTYGYIAPELAYT-----------MAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSS------SSG 724 (764)
Q Consensus 664 ~~~~~--~~~~~~g~~~y~aPE~~~~-----------~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~------~~~ 724 (764)
..... ......|++.|+|||++.+ ..++.++||||+|+++|+|++|+.||........ ...
T Consensus 177 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~ 256 (313)
T 3cek_A 177 QPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPN 256 (313)
T ss_dssp -------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTT
T ss_pred cCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHhcc
Confidence 43322 1234578999999999875 4688899999999999999999999986533110 111
Q ss_pred CcCCCCCCCcHHHHHHHhhhhccc
Q 004268 725 RKISQNPRLDLQCNAYLKNFSQGN 748 (764)
Q Consensus 725 ~~~~~~~~~~~~~~~~~~~~l~~~ 748 (764)
.....+...+..+.++++.|++.+
T Consensus 257 ~~~~~~~~~~~~l~~li~~~l~~d 280 (313)
T 3cek_A 257 HEIEFPDIPEKDLQDVLKCCLKRD 280 (313)
T ss_dssp SCCCCCCCSCHHHHHHHHHHTCSS
T ss_pred cccCCcccchHHHHHHHHHHccCC
Confidence 122233445788999999999977
No 267
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=1.6e-34 Score=304.36 Aligned_cols=230 Identities=23% Similarity=0.344 Sum_probs=164.6
Q ss_pred HhhcCCcce-eeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEee----C
Q 004268 506 ATEDFHIKY-CIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLH----N 579 (764)
Q Consensus 506 ~~~~y~~~~-~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~----~ 579 (764)
..++|.+.+ .||+|+||+||+|.+. +++.||+|++.... ....+....++.++||||+++++++.. .
T Consensus 26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-------~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~ 98 (336)
T 3fhr_A 26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP-------KARQEVDHHWQASGGPHIVCILDVYENMHHGK 98 (336)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH-------HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTE
T ss_pred ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH-------HHHHHHHHHHHhcCCCChHHHHHHHhhccCCC
Confidence 468899965 6999999999999866 79999999986421 122223334566799999999999876 4
Q ss_pred CEEEEEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecC---CCCEEEee
Q 004268 580 KCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNS---NLEAFVAD 656 (764)
Q Consensus 580 ~~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~---~~~~kl~D 656 (764)
...++||||+++|+|.+++... ....+++..++.++.|++.||+||| ++||+||||||+||+++. ++.+||+|
T Consensus 99 ~~~~lv~e~~~gg~L~~~l~~~-~~~~l~~~~~~~i~~ql~~~l~~LH---~~~ivH~dlkp~NIll~~~~~~~~~kl~D 174 (336)
T 3fhr_A 99 RCLLIIMECMEGGELFSRIQER-GDQAFTEREAAEIMRDIGTAIQFLH---SHNIAHRDVKPENLLYTSKEKDAVLKLTD 174 (336)
T ss_dssp EEEEEEEECCTTEEHHHHHHTC--CCCCBHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSTTCCEEECC
T ss_pred ceEEEEEeccCCCCHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEEecCCCceEEEec
Confidence 5689999999999999999854 2346899999999999999999999 889999999999999986 45599999
Q ss_pred eccccccCCCCCCceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCccccccccc-------C----C
Q 004268 657 FGLARLLHPDSSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSSSS-------G----R 725 (764)
Q Consensus 657 fg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~~~-------~----~ 725 (764)
||.+...... ......+++.|+|||++.+..++.++||||+|+++|+|++|+.||.......... . .
T Consensus 175 fg~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 252 (336)
T 3fhr_A 175 FGFAKETTQN--ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGF 252 (336)
T ss_dssp CTTCEEC------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------CC
T ss_pred cccceecccc--ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhcccccc
Confidence 9999865432 2234578999999999988889999999999999999999999997665432210 0 0
Q ss_pred cCCCCCCCcHHHHHHHhhhhccc
Q 004268 726 KISQNPRLDLQCNAYLKNFSQGN 748 (764)
Q Consensus 726 ~~~~~~~~~~~~~~~~~~~l~~~ 748 (764)
.......++..+.++++.|++.+
T Consensus 253 ~~~~~~~~~~~~~~li~~~L~~d 275 (336)
T 3fhr_A 253 PNPEWSEVSEDAKQLIRLLLKTD 275 (336)
T ss_dssp CTTTSTTCCHHHHHHHHHHSCSS
T ss_pred CchhhccCCHHHHHHHHHHCCCC
Confidence 11112457889999999999987
No 268
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=1.3e-34 Score=304.36 Aligned_cols=235 Identities=23% Similarity=0.297 Sum_probs=169.1
Q ss_pred hhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHH-HHHhcCCCceeeEeeEEeeCCEEEE
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEAR-LLSQIRHRNIVKLYGFCLHNKCMFL 584 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~-~l~~l~hpniv~~~~~~~~~~~~~l 584 (764)
.++|++.+.||+|+||.||+|... +|+.||+|++...... .....+..|+. +++.++||||+++++++.+.+..++
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~l 98 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDE--KEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWI 98 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCH--HHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCc--hHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEE
Confidence 478999999999999999999875 7899999999765432 22345556665 6677799999999999999999999
Q ss_pred EEEecCCCCHHHHHhcC--ccccccCHHHHHHHHHHHHHHHHHHHhcCCC-CcEEcCCCCCCeeecCCCCEEEeeecccc
Q 004268 585 IYEYMERGSLFCVLRND--VEAVELDWTKRVNIVKSMAHALSYLHYDCKP-SIVHRDISSNNILLNSNLEAFVADFGLAR 661 (764)
Q Consensus 585 v~e~~~~~~L~~~l~~~--~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~-~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~ 661 (764)
||||+++ +|.+++... .....+++..+..++.|++.||.||| +. ||+||||||+||+++.++.+||+|||.+.
T Consensus 99 v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~ 174 (327)
T 3aln_A 99 CMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLK---ENLKIIHRDIKPSNILLDRSGNIKLCDFGISG 174 (327)
T ss_dssp EECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHH---HHHSCCCSCCCGGGEEEETTTEEEECCCSSSC
T ss_pred EEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHh---ccCCEeECCCCHHHEEEcCCCCEEEccCCCce
Confidence 9999986 787777531 12456899999999999999999999 77 99999999999999999999999999998
Q ss_pred ccCCCCCCceeccccccccccccc----ccCCCCccchHHHHHHHHHHHHhCCCCCCccccccc-ccC---CcC-----C
Q 004268 662 LLHPDSSNRTLVVGTYGYIAPELA----YTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSS-SSG---RKI-----S 728 (764)
Q Consensus 662 ~~~~~~~~~~~~~g~~~y~aPE~~----~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~-~~~---~~~-----~ 728 (764)
...... ......|++.|+|||++ .+..++.++||||+|+++|+|++|+.||........ ... ... .
T Consensus 175 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 253 (327)
T 3aln_A 175 QLVDSI-AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNS 253 (327)
T ss_dssp C-------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CCCCCSCCCCCCCC
T ss_pred eccccc-ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHHhcCCCCCCCCc
Confidence 764332 22334789999999998 466789999999999999999999999986543211 111 111 1
Q ss_pred CCCCCcHHHHHHHhhhhccc
Q 004268 729 QNPRLDLQCNAYLKNFSQGN 748 (764)
Q Consensus 729 ~~~~~~~~~~~~~~~~l~~~ 748 (764)
.....+..+.++++.|++.+
T Consensus 254 ~~~~~~~~l~~li~~~l~~d 273 (327)
T 3aln_A 254 EEREFSPSFINFVNLCLTKD 273 (327)
T ss_dssp SSCCCCHHHHHHHHHHTCSS
T ss_pred ccccCCHHHHHHHHHHhhCC
Confidence 12346889999999999987
No 269
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=1.9e-35 Score=309.44 Aligned_cols=235 Identities=21% Similarity=0.304 Sum_probs=195.6
Q ss_pred HHhhcCCcceeeeecCceeEEEEEE-CCCCEEEEEEccCCCCCcH---HHHHHHHHHHHHHHhcC--CCceeeEeeEEee
Q 004268 505 EATEDFHIKYCIGTGGYGSVYRAQL-SSGKLVALKKLHRSETEEP---AFLESFQTEARLLSQIR--HRNIVKLYGFCLH 578 (764)
Q Consensus 505 ~~~~~y~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~---~~~~~~~~E~~~l~~l~--hpniv~~~~~~~~ 578 (764)
...++|++.+.||+|+||+||+|.+ .+++.||+|++........ ...+.+.+|+.++++++ ||||+++++++..
T Consensus 40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~ 119 (320)
T 3a99_A 40 PLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFER 119 (320)
T ss_dssp CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEEC
T ss_pred CccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEec
Confidence 3568899999999999999999975 4789999999876543210 01145668999999996 5999999999999
Q ss_pred CCEEEEEEEecCC-CCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeec-CCCCEEEee
Q 004268 579 NKCMFLIYEYMER-GSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLN-SNLEAFVAD 656 (764)
Q Consensus 579 ~~~~~lv~e~~~~-~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~-~~~~~kl~D 656 (764)
.+..++|||++.+ ++|.+++.. ...+++..+..++.|++.||+||| ++||+||||||+||+++ +++.+||+|
T Consensus 120 ~~~~~lv~e~~~~~~~L~~~l~~---~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~kL~D 193 (320)
T 3a99_A 120 PDSFVLILERPEPVQDLFDFITE---RGALQEELARSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLID 193 (320)
T ss_dssp SSEEEEEEECCSSEEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEECC
T ss_pred CCcEEEEEEcCCCCccHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHH---HCCcEeCCCCHHHEEEeCCCCCEEEee
Confidence 9999999999986 899999874 346889999999999999999999 89999999999999999 789999999
Q ss_pred eccccccCCCCCCceecccccccccccccccCCC-CccchHHHHHHHHHHHHhCCCCCCcccccccccCCcCCCCCCCcH
Q 004268 657 FGLARLLHPDSSNRTLVVGTYGYIAPELAYTMAV-TEKCDVYSFGVVALEVLMGSHPTDLLSSLSSSSGRKISQNPRLDL 735 (764)
Q Consensus 657 fg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~DiwslG~il~~lltg~~Pf~~~~~~~~~~~~~~~~~~~~~~ 735 (764)
||.+...... ......|++.|+|||++.+..+ +.++||||+|+++|+|++|+.||...... ..........++.
T Consensus 194 fg~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~---~~~~~~~~~~~~~ 268 (320)
T 3a99_A 194 FGSGALLKDT--VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI---IRGQVFFRQRVSS 268 (320)
T ss_dssp CTTCEECCSS--CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHH---HHCCCCCSSCCCH
T ss_pred Cccccccccc--cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhhh---hcccccccccCCH
Confidence 9999876532 2334578999999999887766 67899999999999999999999865432 1222334567889
Q ss_pred HHHHHHhhhhccchh
Q 004268 736 QCNAYLKNFSQGNHR 750 (764)
Q Consensus 736 ~~~~~~~~~l~~~~~ 750 (764)
.+.+++++|++.++.
T Consensus 269 ~~~~li~~~l~~dp~ 283 (320)
T 3a99_A 269 ECQHLIRWCLALRPS 283 (320)
T ss_dssp HHHHHHHHHTCSSGG
T ss_pred HHHHHHHHHccCChh
Confidence 999999999998733
No 270
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=8.1e-35 Score=305.29 Aligned_cols=231 Identities=24% Similarity=0.354 Sum_probs=183.0
Q ss_pred hhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEe--------
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCL-------- 577 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~-------- 577 (764)
.++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++.
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 86 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTD---PQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTD 86 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCS---HHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCC---hHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccc
Confidence 578999999999999999999876 58999999986542 344578899999999999999999999873
Q ss_pred ------eCCEEEEEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeec-CCC
Q 004268 578 ------HNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLN-SNL 650 (764)
Q Consensus 578 ------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~-~~~ 650 (764)
+....++||||++ ++|.+++.. ..+++..++.++.|++.||+||| ++||+||||||+||+++ +++
T Consensus 87 ~~~~~~~~~~~~lv~e~~~-~~L~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~ 158 (320)
T 2i6l_A 87 DVGSLTELNSVYIVQEYME-TDLANVLEQ----GPLLEEHARLFMYQLLRGLKYIH---SANVLHRDLKPANLFINTEDL 158 (320)
T ss_dssp ----CCSCSEEEEEEECCS-EEHHHHHTT----CCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTT
T ss_pred ccccccccCceeEEeeccC-CCHHHHhhc----CCccHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCC
Confidence 4467899999998 599999863 35889999999999999999999 89999999999999997 567
Q ss_pred CEEEeeeccccccCCCC---CCceeccccccccccccccc-CCCCccchHHHHHHHHHHHHhCCCCCCcccccccccC--
Q 004268 651 EAFVADFGLARLLHPDS---SNRTLVVGTYGYIAPELAYT-MAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSSSSG-- 724 (764)
Q Consensus 651 ~~kl~Dfg~~~~~~~~~---~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~~~~-- 724 (764)
.+||+|||.+....... .......++..|+|||++.+ ..++.++||||+|+++|+|++|+.||.+.........
T Consensus 159 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~ 238 (320)
T 2i6l_A 159 VLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLIL 238 (320)
T ss_dssp EEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred eEEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 99999999998764321 12233467899999998765 6789999999999999999999999987654211100
Q ss_pred -------------------------------CcCCCCCCCcHHHHHHHhhhhccc
Q 004268 725 -------------------------------RKISQNPRLDLQCNAYLKNFSQGN 748 (764)
Q Consensus 725 -------------------------------~~~~~~~~~~~~~~~~~~~~l~~~ 748 (764)
......+.++..+.+++++|++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d 293 (320)
T 2i6l_A 239 ESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFS 293 (320)
T ss_dssp HHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSS
T ss_pred HhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCC
Confidence 000112457889999999999977
No 271
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=5.9e-34 Score=296.17 Aligned_cols=244 Identities=23% Similarity=0.400 Sum_probs=187.7
Q ss_pred HhhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEee------
Q 004268 506 ATEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLH------ 578 (764)
Q Consensus 506 ~~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~------ 578 (764)
..++|++.+.||+|+||+||+|+.. +++.||+|++... ....+.+.+|++++++++||||+++++++.+
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 79 (303)
T 1zy4_A 4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT----EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVK 79 (303)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE----HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC
T ss_pred ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc----HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhh
Confidence 4678999999999999999999864 7999999998542 3345788999999999999999999998765
Q ss_pred -------CCEEEEEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCC
Q 004268 579 -------NKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLE 651 (764)
Q Consensus 579 -------~~~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~ 651 (764)
.+..++||||+++++|.+++... ...+++..++.++.|++.||+||| ++||+||||||+||+++.++.
T Consensus 80 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dlkp~Nil~~~~~~ 154 (303)
T 1zy4_A 80 PMTAVKKKSTLFIQMEYCENGTLYDLIHSE--NLNQQRDEYWRLFRQILEALSYIH---SQGIIHRDLKPMNIFIDESRN 154 (303)
T ss_dssp ------CEEEEEEEEECCCSCBHHHHHHHS--CGGGCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSC
T ss_pred hhcccccCCceEEEEecCCCCCHHHhhhcc--ccccchHHHHHHHHHHHHHHHHHH---hCCeecccCCHHhEEEcCCCC
Confidence 45689999999999999999753 345788899999999999999999 889999999999999999999
Q ss_pred EEEeeeccccccCCCC--------------CCceecccccccccccccccC-CCCccchHHHHHHHHHHHHhCCCCCCcc
Q 004268 652 AFVADFGLARLLHPDS--------------SNRTLVVGTYGYIAPELAYTM-AVTEKCDVYSFGVVALEVLMGSHPTDLL 716 (764)
Q Consensus 652 ~kl~Dfg~~~~~~~~~--------------~~~~~~~g~~~y~aPE~~~~~-~~~~~~DiwslG~il~~lltg~~Pf~~~ 716 (764)
+||+|||.+....... .......|++.|+|||++.+. .++.++||||+|+++|+|++ ||...
T Consensus 155 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~ 231 (303)
T 1zy4_A 155 VKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTG 231 (303)
T ss_dssp EEECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSH
T ss_pred EEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCc
Confidence 9999999998654221 122345689999999998865 68999999999999999998 55432
Q ss_pred cc-cc---cccCC----cCCCCCCCcHHHHHHHhhhhccchhhH--HHhhhcCCC
Q 004268 717 SS-LS---SSSGR----KISQNPRLDLQCNAYLKNFSQGNHRWE--NLLFKKFPY 761 (764)
Q Consensus 717 ~~-~~---~~~~~----~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~p~ 761 (764)
.. .. ..... ........+..+.++++.|++.++.-| .......||
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~ 286 (303)
T 1zy4_A 232 MERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGW 286 (303)
T ss_dssp HHHHHHHHHHHSTTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHSSC
T ss_pred hhHHHHHHhccccccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCCCC
Confidence 11 10 01111 111223456678999999999884433 444445555
No 272
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=2.4e-34 Score=305.75 Aligned_cols=229 Identities=28% Similarity=0.386 Sum_probs=187.1
Q ss_pred hhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCE----
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKC---- 581 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~---- 581 (764)
.++|.+.+.||+|+||+||+|.+. +|+.||+|++..... .....+.+.+|+.+++.++||||+++++++.....
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 101 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQ-SEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF 101 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTS-SHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGC
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEeccccc-chHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccc
Confidence 478999999999999999999865 789999999976543 34445788899999999999999999999987653
Q ss_pred --EEEEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeecc
Q 004268 582 --MFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGL 659 (764)
Q Consensus 582 --~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~ 659 (764)
.++||||++ ++|.+++.. .+++..+..++.||+.||+||| ++||+||||||+||+++.++.+||+|||.
T Consensus 102 ~~~~lv~e~~~-~~l~~~~~~-----~~~~~~~~~i~~qi~~al~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~ 172 (353)
T 3coi_A 102 YDFYLVMPFMQ-TDLQKIMGL-----KFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGL 172 (353)
T ss_dssp CCCEEEEECCS-EEGGGTTTS-----CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECTTCCEEECSTTC
T ss_pred eeEEEEecccc-CCHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEeECCCCcEEEeeccc
Confidence 599999998 588777642 3889999999999999999999 88999999999999999999999999999
Q ss_pred ccccCCCCCCceeccccccccccccccc-CCCCccchHHHHHHHHHHHHhCCCCCCcccccccc----------------
Q 004268 660 ARLLHPDSSNRTLVVGTYGYIAPELAYT-MAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSSS---------------- 722 (764)
Q Consensus 660 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~~---------------- 722 (764)
+...... .....+++.|+|||++.+ ..++.++||||+|+++|+|++|+.||.+.+..+..
T Consensus 173 ~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 249 (353)
T 3coi_A 173 ARHADAE---MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQ 249 (353)
T ss_dssp TTC-----------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHT
T ss_pred ccCCCCC---ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence 9765422 234578999999999887 67899999999999999999999999875431100
Q ss_pred ------------------cCCcCCCCCCCcHHHHHHHhhhhccc
Q 004268 723 ------------------SGRKISQNPRLDLQCNAYLKNFSQGN 748 (764)
Q Consensus 723 ------------------~~~~~~~~~~~~~~~~~~~~~~l~~~ 748 (764)
........+..+..+.+++++|++.+
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d 293 (353)
T 3coi_A 250 KLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELD 293 (353)
T ss_dssp TCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSC
T ss_pred HHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCC
Confidence 00011223467889999999999987
No 273
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=4.1e-34 Score=302.53 Aligned_cols=200 Identities=22% Similarity=0.410 Sum_probs=174.0
Q ss_pred hhcCCcceeeeecCceeEEEEEE-C-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCC------ceeeEeeEEee
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQL-S-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHR------NIVKLYGFCLH 578 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~-~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp------niv~~~~~~~~ 578 (764)
.++|++.+.||+|+||+||+|.+ . +++.||+|++... ....+.+.+|+++++.++|+ +++++++++.+
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~ 88 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV----DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEH 88 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS----HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEE
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC----CchhHHHHHHHHHHHHhhhcCCCCceeeEeeeccccc
Confidence 57899999999999999999976 3 6889999998643 23457788999999998765 49999999999
Q ss_pred CCEEEEEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecC----------
Q 004268 579 NKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNS---------- 648 (764)
Q Consensus 579 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~---------- 648 (764)
.+..++||||+ +++|.+++... ....+++..+..++.||+.||+||| ++||+||||||+||+++.
T Consensus 89 ~~~~~lv~e~~-~~~l~~~l~~~-~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~~~~ 163 (339)
T 1z57_A 89 HGHICIVFELL-GLSTYDFIKEN-GFLPFRLDHIRKMAYQICKSVNFLH---SNKLTHTDLKPENILFVQSDYTEAYNPK 163 (339)
T ss_dssp TTEEEEEEECC-CCBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCCCEEEEEC--
T ss_pred CCcEEEEEcCC-CCCHHHHHHhc-CCCCCcHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHEEEeccccccccCCc
Confidence 99999999999 78999998754 2345889999999999999999999 899999999999999987
Q ss_pred ---------CCCEEEeeeccccccCCCCCCceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccc
Q 004268 649 ---------NLEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSS 718 (764)
Q Consensus 649 ---------~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~ 718 (764)
++.+||+|||.+...... .....||+.|+|||++.+..++.++||||+|+++|+|++|+.||...+.
T Consensus 164 ~~~~~~~~~~~~~kl~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~ 239 (339)
T 1z57_A 164 IKRDERTLINPDIKVVDFGSATYDDEH---HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDS 239 (339)
T ss_dssp --CEEEEESCCCEEECCCSSCEETTSC---CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCH
T ss_pred cccccccccCCCceEeeCcccccCccc---cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCh
Confidence 668999999999865432 2345789999999999999999999999999999999999999986543
No 274
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=1.1e-34 Score=329.28 Aligned_cols=227 Identities=25% Similarity=0.400 Sum_probs=185.9
Q ss_pred eeeeecCceeEEEEEEC---CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEEEEEEEecC
Q 004268 514 YCIGTGGYGSVYRAQLS---SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFLIYEYME 590 (764)
Q Consensus 514 ~~ig~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~ 590 (764)
+.||+|+||+||+|.+. .++.||||++...... ....+.+.+|++++++++||||+++++++.. +..++||||++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~-~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~ 452 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAND-PALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAE 452 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGC-GGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccC
Confidence 47999999999999542 5678999999765432 2334789999999999999999999999965 45889999999
Q ss_pred CCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeeccccccCCCCC--
Q 004268 591 RGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLARLLHPDSS-- 668 (764)
Q Consensus 591 ~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~-- 668 (764)
+|+|.+++.. ...+++..+..++.||+.||+||| ++||+||||||+||+++.++.+||+|||+++.......
T Consensus 453 ~g~L~~~l~~---~~~l~~~~~~~i~~qi~~~L~yLH---~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 526 (635)
T 4fl3_A 453 LGPLNKYLQQ---NRHVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 526 (635)
T ss_dssp TEEHHHHHHH---CTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-----
T ss_pred CCCHHHHHhh---CCCCCHHHHHHHHHHHHHHHHHHH---HCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCcccc
Confidence 9999999973 346899999999999999999999 89999999999999999999999999999987654322
Q ss_pred -CceecccccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCccccccc----ccCCcCCCCCCCcHHHHHHHh
Q 004268 669 -NRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLM-GSHPTDLLSSLSS----SSGRKISQNPRLDLQCNAYLK 742 (764)
Q Consensus 669 -~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~llt-g~~Pf~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 742 (764)
......+++.|+|||++.+..++.++||||+||++|||++ |+.||.+....+. ........+...+..+.++++
T Consensus 527 ~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~ 606 (635)
T 4fl3_A 527 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMN 606 (635)
T ss_dssp --------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHH
T ss_pred ccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHH
Confidence 1223456788999999999999999999999999999998 9999987765322 122233445567889999999
Q ss_pred hhhccc
Q 004268 743 NFSQGN 748 (764)
Q Consensus 743 ~~l~~~ 748 (764)
.||+.+
T Consensus 607 ~cl~~d 612 (635)
T 4fl3_A 607 LCWTYD 612 (635)
T ss_dssp HHTCSS
T ss_pred HHcCCC
Confidence 999877
No 275
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=7.6e-35 Score=318.97 Aligned_cols=231 Identities=19% Similarity=0.293 Sum_probs=191.2
Q ss_pred hhcCCcceeeeecCceeEEEEEE-CCCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCC-CceeeEeeEEeeCCEEEE
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQL-SSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRH-RNIVKLYGFCLHNKCMFL 584 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h-pniv~~~~~~~~~~~~~l 584 (764)
.++|++.+.||+|+||.||+|.+ .+++.||||++...... ..+.+|+++++.++| ++++.+..++...+..++
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~-----~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~l 80 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH-----PQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVL 80 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS-----CCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccccc-----HHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEE
Confidence 47899999999999999999986 57999999988765543 457789999999976 667777777888889999
Q ss_pred EEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeee---cCCCCEEEeeecccc
Q 004268 585 IYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILL---NSNLEAFVADFGLAR 661 (764)
Q Consensus 585 v~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll---~~~~~~kl~Dfg~~~ 661 (764)
||||+ +++|.+++... ...+++..++.|+.||+.||+||| ++||+||||||+|||+ +.++.+||+|||+++
T Consensus 81 vme~~-g~sL~~ll~~~--~~~l~~~~~~~i~~qi~~aL~yLH---~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~ 154 (483)
T 3sv0_A 81 VMDLL-GPSLEDLFNFC--SRKLSLKTVLMLADQMINRVEFVH---SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 154 (483)
T ss_dssp EEECC-CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECCGGGTTCEEECCCTTCE
T ss_pred EEECC-CCCHHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccCcceEEEecCCCCCeEEEEeCCcce
Confidence 99999 88999999742 346899999999999999999999 8999999999999999 688999999999998
Q ss_pred ccCCCCCC-------ceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccccccccC----------
Q 004268 662 LLHPDSSN-------RTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSSSSG---------- 724 (764)
Q Consensus 662 ~~~~~~~~-------~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~~~~---------- 724 (764)
........ .....||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.........
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~ 234 (483)
T 3sv0_A 155 KYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVA 234 (483)
T ss_dssp ECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHH
T ss_pred eccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhcccc
Confidence 76543321 1246799999999999999999999999999999999999999987654211100
Q ss_pred -CcCCCCCCCcHHHHHHHhhhhccc
Q 004268 725 -RKISQNPRLDLQCNAYLKNFSQGN 748 (764)
Q Consensus 725 -~~~~~~~~~~~~~~~~~~~~l~~~ 748 (764)
........++..+.++++.|++.+
T Consensus 235 ~~~~~l~~~~p~~l~~li~~cl~~d 259 (483)
T 3sv0_A 235 TSIEALCRGYPTEFASYFHYCRSLR 259 (483)
T ss_dssp SCHHHHHTTSCHHHHHHHHHHHTCC
T ss_pred ccHHHHhcCCcHHHHHHHHHHhcCC
Confidence 001112456788999999999877
No 276
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=8.3e-35 Score=303.84 Aligned_cols=235 Identities=21% Similarity=0.307 Sum_probs=186.5
Q ss_pred HHHHhhcCCcceeeeecCceeEEEEEE-CCCCEEEEEEccCCCCCcH---HHHHHHHHHHHHHHhc----CCCceeeEee
Q 004268 503 MIEATEDFHIKYCIGTGGYGSVYRAQL-SSGKLVALKKLHRSETEEP---AFLESFQTEARLLSQI----RHRNIVKLYG 574 (764)
Q Consensus 503 ~~~~~~~y~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~---~~~~~~~~E~~~l~~l----~hpniv~~~~ 574 (764)
.....++|++.+.||+|+||.||+|.+ .+++.||+|++........ .....+.+|+.+++++ +||||+++++
T Consensus 26 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~ 105 (312)
T 2iwi_A 26 REAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLD 105 (312)
T ss_dssp -------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEE
T ss_pred hhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEE
Confidence 344578899999999999999999976 4789999999976544321 1123456799999999 8999999999
Q ss_pred EEeeCCEEEEEEEe-cCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeec-CCCCE
Q 004268 575 FCLHNKCMFLIYEY-MERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLN-SNLEA 652 (764)
Q Consensus 575 ~~~~~~~~~lv~e~-~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~-~~~~~ 652 (764)
++...+..++|||+ +.+++|.+++.. ...+++..+..++.||+.||+||| ++||+||||||+||+++ .++.+
T Consensus 106 ~~~~~~~~~~v~e~~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~ 179 (312)
T 2iwi_A 106 WFETQEGFMLVLERPLPAQDLFDYITE---KGPLGEGPSRCFFGQVVAAIQHCH---SRGVVHRDIKDENILIDLRRGCA 179 (312)
T ss_dssp EC-----CEEEEECCSSEEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHH---HHTEECCCCSGGGEEEETTTTEE
T ss_pred EEecCCeEEEEEEecCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChhhEEEeCCCCeE
Confidence 99999999999999 788999999974 345899999999999999999999 88999999999999999 88999
Q ss_pred EEeeeccccccCCCCCCceecccccccccccccccCCCC-ccchHHHHHHHHHHHHhCCCCCCcccccccccCCcCCCCC
Q 004268 653 FVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYTMAVT-EKCDVYSFGVVALEVLMGSHPTDLLSSLSSSSGRKISQNP 731 (764)
Q Consensus 653 kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~-~~~DiwslG~il~~lltg~~Pf~~~~~~~~~~~~~~~~~~ 731 (764)
||+|||.+...... ......|++.|+|||++.+..+. .++||||+|+++|+|++|+.||....... ........
T Consensus 180 kl~dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~---~~~~~~~~ 254 (312)
T 2iwi_A 180 KLIDFGSGALLHDE--PYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEIL---EAELHFPA 254 (312)
T ss_dssp EECCCSSCEECCSS--CBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHH---HTCCCCCT
T ss_pred EEEEcchhhhcccC--cccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHHHh---hhccCCcc
Confidence 99999999876532 23345789999999998877664 58999999999999999999998654321 22233456
Q ss_pred CCcHHHHHHHhhhhccc
Q 004268 732 RLDLQCNAYLKNFSQGN 748 (764)
Q Consensus 732 ~~~~~~~~~~~~~l~~~ 748 (764)
.++..+.+++++|++.+
T Consensus 255 ~~~~~~~~li~~~l~~~ 271 (312)
T 2iwi_A 255 HVSPDCCALIRRCLAPK 271 (312)
T ss_dssp TSCHHHHHHHHHHTCSS
T ss_pred cCCHHHHHHHHHHccCC
Confidence 67899999999999987
No 277
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.6e-34 Score=303.50 Aligned_cols=237 Identities=25% Similarity=0.388 Sum_probs=193.3
Q ss_pred hhcCCcceeeeecCceeEEEEEE-----CCCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCC-
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQL-----SSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNK- 580 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~- 580 (764)
.++|++.+.||+|+||.||+|+. .+++.||+|++.... ....+.+.+|++++++++||||+++++++...+
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 116 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGR 116 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCC---SHHHHHHHHHHHHHHTCCCTTBCCEEEEECC---
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCC---HHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCC
Confidence 56799999999999999999973 368899999987643 233578899999999999999999999987654
Q ss_pred -EEEEEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeecc
Q 004268 581 -CMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGL 659 (764)
Q Consensus 581 -~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~ 659 (764)
..++||||+++++|.+++... ...+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||.
T Consensus 117 ~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp~NIli~~~~~~kL~Dfg~ 191 (326)
T 2w1i_A 117 RNLKLIMEYLPYGSLRDYLQKH--KERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGL 191 (326)
T ss_dssp -CCEEEECCCTTCBHHHHHHHS--TTSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTT
T ss_pred CceEEEEECCCCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHH---hCCEeccCCCcceEEEcCCCcEEEecCcc
Confidence 689999999999999999753 245899999999999999999999 88999999999999999999999999999
Q ss_pred ccccCCCCCC---ceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCccccc-----------------
Q 004268 660 ARLLHPDSSN---RTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSL----------------- 719 (764)
Q Consensus 660 ~~~~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~----------------- 719 (764)
+......... .....++..|+|||++.+..++.++||||+|+++|+|+||..||......
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (326)
T 2w1i_A 192 TKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 271 (326)
T ss_dssp CEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHH
T ss_pred hhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHH
Confidence 9876543321 12235677899999999888999999999999999999999998743210
Q ss_pred --cc-ccCCcCCCCCCCcHHHHHHHhhhhccchhh
Q 004268 720 --SS-SSGRKISQNPRLDLQCNAYLKNFSQGNHRW 751 (764)
Q Consensus 720 --~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 751 (764)
.. ........++..+..+.+++++|++.++.-
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~ 306 (326)
T 2w1i_A 272 LIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQ 306 (326)
T ss_dssp HHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGG
T ss_pred HHHHhhcCCCCCCCCcccHHHHHHHHHHcCCChhh
Confidence 00 011122335567889999999999877433
No 278
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=1.5e-34 Score=305.44 Aligned_cols=194 Identities=28% Similarity=0.488 Sum_probs=159.6
Q ss_pred hhcCCcceeeeecCceeEEEEEECCCCEEEEEEccCCCCCcHHHHHHHHHHHHH--HHhcCCCceeeEeeEEee-----C
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARL--LSQIRHRNIVKLYGFCLH-----N 579 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~--l~~l~hpniv~~~~~~~~-----~ 579 (764)
.++|++.+.||+|+||+||+|+. +++.||+|++..... ..+..|.++ +..++||||+++++++.. .
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~------~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~ 84 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANR------QNFINEKNIYRVPLMEHDNIARFIVGDERVTADGR 84 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGGH------HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSC
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccch------hhHHHHHHHHHHHhccCcchhhheecccccccCCC
Confidence 57899999999999999999977 589999999864321 334444444 445799999999985542 3
Q ss_pred CEEEEEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCC---------CcEEcCCCCCCeeecCCC
Q 004268 580 KCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKP---------SIVHRDISSNNILLNSNL 650 (764)
Q Consensus 580 ~~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~---------~iiH~Dlkp~NIll~~~~ 650 (764)
..+++||||+++|+|.+++... ..++..+..++.||+.||+||| ++ ||+||||||+||+++.++
T Consensus 85 ~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~qi~~~L~~LH---~~~~~~~~~~~~ivH~Dikp~Nill~~~~ 157 (336)
T 3g2f_A 85 MEYLLVMEYYPNGSLXKYLSLH----TSDWVSSCRLAHSVTRGLAYLH---TELPRGDHYKPAISHRDLNSRNVLVKNDG 157 (336)
T ss_dssp EEEEEEECCCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHH---CCBCCGGGCBCCEECSSCSGGGEEECTTS
T ss_pred ceEEEEEecCCCCcHHHHHhhc----ccchhHHHHHHHHHHHHHHHHH---hhhccccccccceeecccccceEEEcCCC
Confidence 3679999999999999999643 3588899999999999999999 88 999999999999999999
Q ss_pred CEEEeeeccccccCCCC--------CCceeccccccccccccccc-------CCCCccchHHHHHHHHHHHHhCCCCCC
Q 004268 651 EAFVADFGLARLLHPDS--------SNRTLVVGTYGYIAPELAYT-------MAVTEKCDVYSFGVVALEVLMGSHPTD 714 (764)
Q Consensus 651 ~~kl~Dfg~~~~~~~~~--------~~~~~~~g~~~y~aPE~~~~-------~~~~~~~DiwslG~il~~lltg~~Pf~ 714 (764)
.+||+|||++....... .......||+.|+|||++.+ ..++.++||||+||++|||++|..||.
T Consensus 158 ~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~ 236 (336)
T 3g2f_A 158 TCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLF 236 (336)
T ss_dssp CEEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGS
T ss_pred cEEEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCC
Confidence 99999999998764321 11223578999999999887 456779999999999999999977754
No 279
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=2.2e-34 Score=313.81 Aligned_cols=231 Identities=23% Similarity=0.351 Sum_probs=175.1
Q ss_pred hcCCcceeeeecCceeEEEEEECCCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhc-CCCceeeEeeEEeeCCEEEEEE
Q 004268 508 EDFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQI-RHRNIVKLYGFCLHNKCMFLIY 586 (764)
Q Consensus 508 ~~y~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lv~ 586 (764)
+.|.+.+.||+|+||+||.+...+|+.||||++.... .+.+.+|+++++++ +||||+++++++.+.+..|+||
T Consensus 15 ~~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~------~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~ 88 (434)
T 2rio_A 15 NLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF------CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIAL 88 (434)
T ss_dssp SCEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGGG------HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEE
T ss_pred heeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHH------HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEE
Confidence 4566678899999999988777789999999986532 25677999999887 8999999999999999999999
Q ss_pred EecCCCCHHHHHhcCccccc----cCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCC-------------
Q 004268 587 EYMERGSLFCVLRNDVEAVE----LDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSN------------- 649 (764)
Q Consensus 587 e~~~~~~L~~~l~~~~~~~~----l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~------------- 649 (764)
||++ |+|.+++........ .++..+..++.||+.||+||| ++||+||||||+||+++.+
T Consensus 89 E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~ 164 (434)
T 2rio_A 89 ELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAEN 164 (434)
T ss_dssp CCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEECCHHHHSCCTTCCCS
T ss_pred ecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEecCcccccccccCCCc
Confidence 9996 599999975422111 123345789999999999999 8899999999999999754
Q ss_pred CCEEEeeeccccccCCCCCC----ceeccccccccccccccc-------CCCCccchHHHHHHHHHHHHh-CCCCCCccc
Q 004268 650 LEAFVADFGLARLLHPDSSN----RTLVVGTYGYIAPELAYT-------MAVTEKCDVYSFGVVALEVLM-GSHPTDLLS 717 (764)
Q Consensus 650 ~~~kl~Dfg~~~~~~~~~~~----~~~~~g~~~y~aPE~~~~-------~~~~~~~DiwslG~il~~llt-g~~Pf~~~~ 717 (764)
+.+||+|||++......... .....||+.|+|||++.+ ..++.++||||+||++|||+| |+.||....
T Consensus 165 ~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~ 244 (434)
T 2rio_A 165 LRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKY 244 (434)
T ss_dssp CEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTT
T ss_pred eEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCch
Confidence 48999999999877543221 234579999999999876 568999999999999999999 999997653
Q ss_pred cccccc--C-CcCC-----CCCCCcHHHHHHHhhhhccc
Q 004268 718 SLSSSS--G-RKIS-----QNPRLDLQCNAYLKNFSQGN 748 (764)
Q Consensus 718 ~~~~~~--~-~~~~-----~~~~~~~~~~~~~~~~l~~~ 748 (764)
...... . .... ..+.++..+.+++++|++.+
T Consensus 245 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d 283 (434)
T 2rio_A 245 SRESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHD 283 (434)
T ss_dssp THHHHHHHTCCCCCCCTTCCCHHHHHHHHHHHHHHTCSS
T ss_pred hhHHHHhcCCCCcccccccccccchHHHHHHHHHHhhCC
Confidence 321110 0 0111 11224578899999999987
No 280
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=5.7e-34 Score=305.92 Aligned_cols=203 Identities=26% Similarity=0.372 Sum_probs=173.6
Q ss_pred HhhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcC-CC-----ceeeEeeEEee
Q 004268 506 ATEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIR-HR-----NIVKLYGFCLH 578 (764)
Q Consensus 506 ~~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp-----niv~~~~~~~~ 578 (764)
..++|++.+.||+|+||+||+|... +++.||+|++... ......+.+|+++++.++ |+ +|+++++++..
T Consensus 52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~ 127 (382)
T 2vx3_A 52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK----KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMF 127 (382)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS----HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEE
T ss_pred eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc----HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeecc
Confidence 4689999999999999999999865 7889999998743 233467788999988884 44 49999999999
Q ss_pred CCEEEEEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeec--CCCCEEEee
Q 004268 579 NKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLN--SNLEAFVAD 656 (764)
Q Consensus 579 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~--~~~~~kl~D 656 (764)
.+..++||||+++ +|.+++... ....+++..++.++.|++.||.|||.. +.||+||||||+||+++ .++.+||+|
T Consensus 128 ~~~~~lv~e~~~~-~L~~~l~~~-~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~D 204 (382)
T 2vx3_A 128 RNHLCLVFEMLSY-NLYDLLRNT-NFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVD 204 (382)
T ss_dssp TTEEEEEEECCCC-BHHHHHHHT-TTSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECC
T ss_pred CCceEEEEecCCC-CHHHHHhhc-CcCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEe
Confidence 9999999999975 999998754 234589999999999999999999932 46999999999999995 578899999
Q ss_pred eccccccCCCCCCceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccc
Q 004268 657 FGLARLLHPDSSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSS 718 (764)
Q Consensus 657 fg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~ 718 (764)
||+++..... .....||+.|+|||++.+..++.++||||+||++|+|++|+.||.+.+.
T Consensus 205 FG~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~ 263 (382)
T 2vx3_A 205 FGSSCQLGQR---IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANE 263 (382)
T ss_dssp CTTCEETTCC---CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred ccCceecccc---cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH
Confidence 9999876432 2345789999999999999999999999999999999999999986543
No 281
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=5.5e-34 Score=309.45 Aligned_cols=231 Identities=23% Similarity=0.324 Sum_probs=176.7
Q ss_pred hhcCCcceeeeecCceeEEEEEECCCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhc-CCCceeeEeeEEeeCCEEEEE
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQI-RHRNIVKLYGFCLHNKCMFLI 585 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lv 585 (764)
..+|.+.+.||+|+||+||.....+++.||||++..... ..+.+|+++++++ +||||+++++++.+....|+|
T Consensus 23 ~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~------~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv 96 (432)
T 3p23_A 23 KISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF------SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIA 96 (432)
T ss_dssp TEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE------EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEE
T ss_pred cEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH------HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEE
Confidence 356999999999999997766666799999999876443 2345899999999 799999999999999999999
Q ss_pred EEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecC-----CCCEEEeeeccc
Q 004268 586 YEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNS-----NLEAFVADFGLA 660 (764)
Q Consensus 586 ~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~-----~~~~kl~Dfg~~ 660 (764)
|||++ |+|.+++.... ....+..+..++.||+.||+||| ++||+||||||+||+++. ...+||+|||++
T Consensus 97 ~E~~~-g~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a 170 (432)
T 3p23_A 97 IELCA-ATLQEYVEQKD--FAHLGLEPITLLQQTTSGLAHLH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLC 170 (432)
T ss_dssp EECCS-EEHHHHHHSSS--CCCCSSCHHHHHHHHHHHHHHHH---HTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEE
T ss_pred EECCC-CCHHHHHHhcC--CCccchhHHHHHHHHHHHHHHHH---HCcCEeCCCCHHHEEEecCCCCCceeEEEecccce
Confidence 99997 59999997532 23444556789999999999999 899999999999999953 336889999999
Q ss_pred cccCCCC---CCceecccccccccccccc---cCCCCccchHHHHHHHHHHHHh-CCCCCCcccccccccC------CcC
Q 004268 661 RLLHPDS---SNRTLVVGTYGYIAPELAY---TMAVTEKCDVYSFGVVALEVLM-GSHPTDLLSSLSSSSG------RKI 727 (764)
Q Consensus 661 ~~~~~~~---~~~~~~~g~~~y~aPE~~~---~~~~~~~~DiwslG~il~~llt-g~~Pf~~~~~~~~~~~------~~~ 727 (764)
+...... .......||+.|+|||++. +..++.++||||+||++|+|++ |..||........... ...
T Consensus 171 ~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~~~ 250 (432)
T 3p23_A 171 KKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCL 250 (432)
T ss_dssp ECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHHHTTCCCCTTS
T ss_pred eeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHHHhccCCcccc
Confidence 8765332 2233467999999999987 4567889999999999999999 9999975443211111 111
Q ss_pred CCCCCCcHHHHHHHhhhhccch
Q 004268 728 SQNPRLDLQCNAYLKNFSQGNH 749 (764)
Q Consensus 728 ~~~~~~~~~~~~~~~~~l~~~~ 749 (764)
......+..+.+++++|++.++
T Consensus 251 ~~~~~~~~~~~~li~~~L~~dP 272 (432)
T 3p23_A 251 HPEKHEDVIARELIEKMIAMDP 272 (432)
T ss_dssp CTTCHHHHHHHHHHHHHSCSSG
T ss_pred CccccccHHHHHHHHHHHhCCH
Confidence 1112234567899999999883
No 282
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=100.00 E-value=2.6e-37 Score=341.73 Aligned_cols=377 Identities=21% Similarity=0.159 Sum_probs=255.7
Q ss_pred CCCeeEEEeCCCCccccCCcc-ccCCCCCcEEEcCCCcCccc----CCccccCCCCCCEEEccCCcCcccCCcc-cCCCC
Q 004268 18 FPNLVTFRIWGTLLSGRMPSE-IGALSKLEKLVLSHNSLTGR----IPSEIGALSRLKVLDLSYNRLTGTIPSE-IGSLR 91 (764)
Q Consensus 18 ~~~l~~L~l~~~~~~~~~~~~-~~~l~~L~~L~Ls~n~i~~~----~~~~~~~l~~L~~L~L~~n~i~~~~~~~-~~~l~ 91 (764)
+|+|+.|++++|.++...... +..+++|++|+|++|.+++. ++..+..+++|++|+|++|.++...+.. +..++
T Consensus 2 ~~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~ 81 (461)
T 1z7x_W 2 SLDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQ 81 (461)
T ss_dssp CEEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTC
T ss_pred CccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHh
Confidence 467888999998887554333 77788899999999988742 4566777888999999998887543322 23344
Q ss_pred ----CCCEEecCCCcccc----cCCccCcCCCCCCEEEccCCcCcccCCcccc-----CCCCcCEEecccCcccccC---
Q 004268 92 ----DLLDLNLSNNILNG----SIPLEFGNLKDLDQLRLQGNKLDGLIPSSIG-----NLTNLTYLDLSLNQLSGRL--- 155 (764)
Q Consensus 92 ----~L~~L~L~~n~l~~----~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~-----~l~~L~~L~L~~n~l~~~~--- 155 (764)
+|++|+|++|.++. ..+..|..+++|++|+|++|.++...+..+. .+++|++|+|++|+++...
T Consensus 82 ~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~ 161 (461)
T 1z7x_W 82 TPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEP 161 (461)
T ss_dssp STTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHH
T ss_pred hCCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHH
Confidence 68899999998884 3467788888899999998888754333322 3567888888888887543
Q ss_pred -CccccCCCCCCeeecccCCCCCCCCCccc-----cCCCccEEEecCccCcCCc----ccccCCccccceeeccCccccc
Q 004268 156 -PQEVGNLKNLKSLFLDNNHLSGPIPSTLY-----HLNQLATLCLGYNKLVGPV----TKEVGNMKNLDRLHLNGNNLTG 225 (764)
Q Consensus 156 -~~~~~~l~~L~~L~L~~n~i~~~~~~~~~-----~l~~L~~L~l~~n~i~~~~----~~~~~~l~~L~~L~L~~n~l~~ 225 (764)
+..+..+++|++|++++|.+++.....+. ..++|++|++++|.+.... +..+..+++|++|++++|.+++
T Consensus 162 l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~ 241 (461)
T 1z7x_W 162 LASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGD 241 (461)
T ss_dssp HHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHH
T ss_pred HHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCCh
Confidence 45566678888888888887643333332 2558888888888887643 4455667888888888888765
Q ss_pred cc-----CccccCCCCCCEEEccCCcccCC----CCcCCcCCCCCCeEEccCCcccCCCCccccC-----CCCCCeEecc
Q 004268 226 SI-----PSTIGYLNLLDELHLSHNRLDGP----IPPTIGNLTNLIALDLSSNQLSGLLPREVGN-----LKYLASLSLN 291 (764)
Q Consensus 226 ~~-----~~~~~~l~~L~~L~L~~n~l~~~----~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~-----l~~L~~L~l~ 291 (764)
.. +..+..+++|+.|++++|.+++. .+..+..+++|+.|+|++|.+++..+..+.. .++|+.|+++
T Consensus 242 ~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~ 321 (461)
T 1z7x_W 242 VGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVK 321 (461)
T ss_dssp HHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECT
T ss_pred HHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcC
Confidence 32 22233567888888888877753 3455666788888888888876443333332 3578888888
Q ss_pred CccccCC----CCCCCCCCCccceEEccCCcCccCCChhhhc-----ccccceeecccccccc----CCchhcccccccc
Q 004268 292 GNILIGP----IPPTIGYLTNLTYLNLGYNRLSSSIPPELMN-----CSQLLNLVLSHNSLSG----SIPSEIGNLIFFR 358 (764)
Q Consensus 292 ~n~l~~~----~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~-----l~~L~~L~ls~N~l~~----~~~~~~~~l~~L~ 358 (764)
+|.+++. .+..+..+++|++|+|++|++++..+..+.. .++|++|+|++|++++ .++..+..+++|+
T Consensus 322 ~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~ 401 (461)
T 1z7x_W 322 SCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLR 401 (461)
T ss_dssp TSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCC
T ss_pred CCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCcc
Confidence 8877654 2334556678888888888777544444433 5678888888888775 5666777777888
Q ss_pred eeecccccccCCCCCC----C-CCCCccceecCCCCccccc
Q 004268 359 QLDLSRNFINGTIPSQ----L-GKIPNISAVDLSKNNLSGV 394 (764)
Q Consensus 359 ~L~l~~N~l~~~~~~~----~-~~l~~L~~l~l~~N~l~~~ 394 (764)
.|+|++|++++..... + ....+|+.|++.++.+...
T Consensus 402 ~L~l~~N~i~~~~~~~l~~~l~~~~~~L~~L~~~~~~~~~~ 442 (461)
T 1z7x_W 402 ELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYWSEE 442 (461)
T ss_dssp EEECCSSSCCHHHHHHHHHHHTSTTCCCCEEECTTCCCCHH
T ss_pred EEECCCCCCCHHHHHHHHHHhccCCcchhheeecccccCHH
Confidence 8888888776431111 1 1123455555555555543
No 283
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=2.1e-35 Score=307.21 Aligned_cols=235 Identities=27% Similarity=0.396 Sum_probs=170.9
Q ss_pred hhcCCcceeeeecCceeEEEEEECCCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHh--cCCCceeeEeeEEeeCC----
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQ--IRHRNIVKLYGFCLHNK---- 580 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~--l~hpniv~~~~~~~~~~---- 580 (764)
.++|++.+.||+|+||+||+|++. ++.||+|++.... ...+.+|.+++.. ++||||+++++++....
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~------~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~ 74 (303)
T 3gxj_A 2 ARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSRE------ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWT 74 (303)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-TT------HHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSE
T ss_pred cceeeehhhccCCCCeEEEEEEEc-CcceEEEEecccc------hhhHHHHHHHHHHHhccCcceeeeeeecccCCCccc
Confidence 478999999999999999999875 8999999986432 2556778888887 79999999999998876
Q ss_pred EEEEEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhc-----CCCCcEEcCCCCCCeeecCCCCEEEe
Q 004268 581 CMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYD-----CKPSIVHRDISSNNILLNSNLEAFVA 655 (764)
Q Consensus 581 ~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-----~~~~iiH~Dlkp~NIll~~~~~~kl~ 655 (764)
..++||||+++|+|.+++.+. .+++..+..++.|++.||+|||.. +++||+||||||+||+++.++.+||+
T Consensus 75 ~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nil~~~~~~~kl~ 150 (303)
T 3gxj_A 75 QLWLVSDYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIA 150 (303)
T ss_dssp EEEEEEECCTTCCHHHHHHHC----CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCCGGGC-CCTTCCC-BC
T ss_pred eeEEEEeccCCCCHHHHHhcc----CcchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCCHHHeEECCCCCEEEe
Confidence 799999999999999999643 477888999999999999999932 15699999999999999999999999
Q ss_pred eeccccccCCCCCC----ceecccccccccccccccC------CCCccchHHHHHHHHHHHHhC----------CCCCCc
Q 004268 656 DFGLARLLHPDSSN----RTLVVGTYGYIAPELAYTM------AVTEKCDVYSFGVVALEVLMG----------SHPTDL 715 (764)
Q Consensus 656 Dfg~~~~~~~~~~~----~~~~~g~~~y~aPE~~~~~------~~~~~~DiwslG~il~~lltg----------~~Pf~~ 715 (764)
|||++......... .....||+.|+|||++.+. .++.++||||+||++|||++| +.||..
T Consensus 151 DFg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~ 230 (303)
T 3gxj_A 151 DLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYD 230 (303)
T ss_dssp CCCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTT
T ss_pred ecCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccc
Confidence 99999766443322 1234789999999998876 344689999999999999999 777765
Q ss_pred ccccccccC------CcCCCCCCCc---------HHHHHHHhhhhccchhhH
Q 004268 716 LSSLSSSSG------RKISQNPRLD---------LQCNAYLKNFSQGNHRWE 752 (764)
Q Consensus 716 ~~~~~~~~~------~~~~~~~~~~---------~~~~~~~~~~l~~~~~~~ 752 (764)
......... ......+..+ ..+.+++++|++.++.-|
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R 282 (303)
T 3gxj_A 231 LVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAAR 282 (303)
T ss_dssp TCC-CCCCC-CHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGS
T ss_pred cCCCCccHHHHHHHHHHhhcCCCccccccchhhHHHHHHHHHHHhccCcccC
Confidence 433211110 1111122222 357788888888774433
No 284
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=2.2e-34 Score=321.29 Aligned_cols=204 Identities=30% Similarity=0.422 Sum_probs=175.2
Q ss_pred HhhcCCcceeeeecCceeEEEEEE-CCCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEee------
Q 004268 506 ATEDFHIKYCIGTGGYGSVYRAQL-SSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLH------ 578 (764)
Q Consensus 506 ~~~~y~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~------ 578 (764)
..++|++.+.||+|+||+||+|.+ .+|+.||+|++.... .....+.+.+|++++++++||||+++++++..
T Consensus 12 ~~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~--~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~ 89 (676)
T 3qa8_A 12 TCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQEL--SPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAP 89 (676)
T ss_dssp -----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCC--CHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCT
T ss_pred CCCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccC--CHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccC
Confidence 358899999999999999999976 478999999987643 33445788999999999999999999998765
Q ss_pred CCEEEEEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCC---EEEe
Q 004268 579 NKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLE---AFVA 655 (764)
Q Consensus 579 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~---~kl~ 655 (764)
.+..++||||+++++|.+++........+++..++.++.|++.||+||| ++||+||||||+||+++.++. +||+
T Consensus 90 ~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLH---s~gIVHrDLKP~NILl~~~g~~~~vKL~ 166 (676)
T 3qa8_A 90 NDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLH---ENRIIHRDLKPENIVLQPGPQRLIHKII 166 (676)
T ss_dssp TSSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHH---HTTBCCCCCCSTTEEEECCSSSCEEEEC
T ss_pred CCeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHeEeecCCCceeEEEc
Confidence 6678999999999999999986555556889999999999999999999 889999999999999997665 9999
Q ss_pred eeccccccCCCCCCceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCc
Q 004268 656 DFGLARLLHPDSSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDL 715 (764)
Q Consensus 656 Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~ 715 (764)
|||.+....... ......|++.|+|||++.+..++.++||||+|+++|+|++|+.||..
T Consensus 167 DFG~a~~~~~~~-~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~ 225 (676)
T 3qa8_A 167 DLGYAKELDQGE-LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLP 225 (676)
T ss_dssp SCCCCCBTTSCC-CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cccccccccccc-ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCc
Confidence 999998765433 23446789999999999999999999999999999999999999965
No 285
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=6.6e-34 Score=324.30 Aligned_cols=239 Identities=26% Similarity=0.374 Sum_probs=193.8
Q ss_pred HhhcCCcceeeeecCceeEEEEEEC----CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCE
Q 004268 506 ATEDFHIKYCIGTGGYGSVYRAQLS----SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKC 581 (764)
Q Consensus 506 ~~~~y~~~~~ig~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~ 581 (764)
..++|++.+.||+|+||+||+|.+. .+..||+|.+..... ....+.+.+|+.++++++||||+++++++.+ +.
T Consensus 388 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~-~~ 464 (656)
T 2j0j_A 388 QRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTS--DSVREKFLQEALTMRQFDHPHIVKLIGVITE-NP 464 (656)
T ss_dssp CGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTC--HHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SS
T ss_pred ccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCC--HHHHHHHHHHHHHHHhCCCCCCCeEEEEEec-Cc
Confidence 3578999999999999999999764 245799999865432 3445788999999999999999999999854 56
Q ss_pred EEEEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeecccc
Q 004268 582 MFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLAR 661 (764)
Q Consensus 582 ~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~ 661 (764)
.|+||||+++|+|.++++.. ...+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+++
T Consensus 465 ~~lv~E~~~~g~L~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDikp~NILl~~~~~vkL~DFG~a~ 539 (656)
T 2j0j_A 465 VWIIMELCTLGELRSFLQVR--KFSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSR 539 (656)
T ss_dssp CEEEEECCTTCBHHHHHHHT--TTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCCCCC
T ss_pred eEEEEEcCCCCcHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccchHhEEEeCCCCEEEEecCCCe
Confidence 89999999999999999743 335889999999999999999999 8899999999999999999999999999998
Q ss_pred ccCCCCCC-ceecccccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccccccc----cCCcCCCCCCCcH
Q 004268 662 LLHPDSSN-RTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLM-GSHPTDLLSSLSSS----SGRKISQNPRLDL 735 (764)
Q Consensus 662 ~~~~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~llt-g~~Pf~~~~~~~~~----~~~~~~~~~~~~~ 735 (764)
........ .....+++.|+|||++.+..++.++||||+|+++|||++ |..||.+....+.. .......++..+.
T Consensus 540 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 619 (656)
T 2j0j_A 540 YMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPP 619 (656)
T ss_dssp SCCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHHTCCCCCCTTCCH
T ss_pred ecCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCCCCccccH
Confidence 76433221 223456789999999999999999999999999999997 99999876543221 1223334566788
Q ss_pred HHHHHHhhhhccchhhH
Q 004268 736 QCNAYLKNFSQGNHRWE 752 (764)
Q Consensus 736 ~~~~~~~~~l~~~~~~~ 752 (764)
.+.+++.+|++.++.-|
T Consensus 620 ~l~~li~~~l~~dP~~R 636 (656)
T 2j0j_A 620 TLYSLMTKCWAYDPSRR 636 (656)
T ss_dssp HHHHHHHHHTCSSGGGS
T ss_pred HHHHHHHHHcCCChhHC
Confidence 99999999999874433
No 286
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=1.8e-33 Score=298.02 Aligned_cols=243 Identities=26% Similarity=0.372 Sum_probs=190.4
Q ss_pred ccCHHHHHHHhhcCCcceeeeecCceeEEEEEECCCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHh--cCCCceeeEee
Q 004268 497 RITFEEMIEATEDFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQ--IRHRNIVKLYG 574 (764)
Q Consensus 497 ~~~~~~~~~~~~~y~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~--l~hpniv~~~~ 574 (764)
..+........++|++.+.||+|+||+||+|.+. ++.||+|++.... ...+.+|.++++. ++||||+++++
T Consensus 31 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~------~~~~~~e~~~~~~~~l~h~ni~~~~~ 103 (342)
T 1b6c_B 31 GLPLLVQRTIARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSRE------ERSWFREAEIYQTVMLRHENILGFIA 103 (342)
T ss_dssp SSCHHHHHHHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEECGGG------HHHHHHHHHHHHHSCCCCTTBCCEEE
T ss_pred CCceeecccccccEEEEeeecCCCCcEEEEEEEc-CccEEEEEeCchh------HHHHHHHHHHHHHhhcCCCcEEEEEe
Confidence 3344444556789999999999999999999885 8999999986432 2567789999988 68999999999
Q ss_pred EEeeCC----EEEEEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhc-----CCCCcEEcCCCCCCee
Q 004268 575 FCLHNK----CMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYD-----CKPSIVHRDISSNNIL 645 (764)
Q Consensus 575 ~~~~~~----~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-----~~~~iiH~Dlkp~NIl 645 (764)
++.... ..++||||+++|+|.+++.+. .+++..+..++.|++.||+|||.. +++||+||||||+||+
T Consensus 104 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIl 179 (342)
T 1b6c_B 104 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNIL 179 (342)
T ss_dssp EEECCCSSCCCEEEEECCCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEE
T ss_pred eecccCCccceeEEEEeecCCCcHHHHHhcc----CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEE
Confidence 998876 799999999999999999642 588999999999999999999932 1469999999999999
Q ss_pred ecCCCCEEEeeeccccccCCCCCC----ceecccccccccccccccCC------CCccchHHHHHHHHHHHHhC------
Q 004268 646 LNSNLEAFVADFGLARLLHPDSSN----RTLVVGTYGYIAPELAYTMA------VTEKCDVYSFGVVALEVLMG------ 709 (764)
Q Consensus 646 l~~~~~~kl~Dfg~~~~~~~~~~~----~~~~~g~~~y~aPE~~~~~~------~~~~~DiwslG~il~~lltg------ 709 (764)
++.++.+||+|||.+......... .....|++.|+|||++.+.. ++.++||||+|+++|+|+||
T Consensus 180 l~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~ 259 (342)
T 1b6c_B 180 VKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGI 259 (342)
T ss_dssp ECTTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTB
T ss_pred ECCCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCc
Confidence 999999999999999876543321 23357899999999987762 34689999999999999999
Q ss_pred ----CCCCCccccccccc------CCcCCCCCCC---------cHHHHHHHhhhhccchh
Q 004268 710 ----SHPTDLLSSLSSSS------GRKISQNPRL---------DLQCNAYLKNFSQGNHR 750 (764)
Q Consensus 710 ----~~Pf~~~~~~~~~~------~~~~~~~~~~---------~~~~~~~~~~~l~~~~~ 750 (764)
+.||.......... .......+.+ +..+.+++++|++.++.
T Consensus 260 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~ 319 (342)
T 1b6c_B 260 HEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGA 319 (342)
T ss_dssp CCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGG
T ss_pred ccccccCccccCcCcccHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChh
Confidence 78887654321100 0011112222 24667888888887733
No 287
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=100.00 E-value=2.2e-37 Score=342.32 Aligned_cols=371 Identities=22% Similarity=0.193 Sum_probs=294.4
Q ss_pred CCCCcEEEcCCCcCcccCCcc-ccCCCCCCEEEccCCcCcc----cCCcccCCCCCCCEEecCCCcccccCCccC-cCCC
Q 004268 42 LSKLEKLVLSHNSLTGRIPSE-IGALSRLKVLDLSYNRLTG----TIPSEIGSLRDLLDLNLSNNILNGSIPLEF-GNLK 115 (764)
Q Consensus 42 l~~L~~L~Ls~n~i~~~~~~~-~~~l~~L~~L~L~~n~i~~----~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~-~~l~ 115 (764)
+++|++|+|++|++++..... +..+++|++|+|++|+++. .++..+..+++|++|+|++|.++...+..+ ..++
T Consensus 2 ~~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~ 81 (461)
T 1z7x_W 2 SLDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQ 81 (461)
T ss_dssp CEEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTC
T ss_pred CccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHh
Confidence 357899999999998654333 7889999999999999984 346778889999999999999986444333 3455
Q ss_pred ----CCCEEEccCCcCcc----cCCccccCCCCcCEEecccCcccccCCccc-----cCCCCCCeeecccCCCCCCC---
Q 004268 116 ----DLDQLRLQGNKLDG----LIPSSIGNLTNLTYLDLSLNQLSGRLPQEV-----GNLKNLKSLFLDNNHLSGPI--- 179 (764)
Q Consensus 116 ----~L~~L~L~~n~l~~----~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~-----~~l~~L~~L~L~~n~i~~~~--- 179 (764)
+|++|+|++|.++. ..+..+..+++|++|+|++|.+++..+..+ ...++|++|++++|.+++..
T Consensus 82 ~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~ 161 (461)
T 1z7x_W 82 TPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEP 161 (461)
T ss_dssp STTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHH
T ss_pred hCCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHH
Confidence 79999999999985 347789999999999999999975544433 23678999999999998643
Q ss_pred -CCccccCCCccEEEecCccCcCCcccccC-----CccccceeeccCcccccc----cCccccCCCCCCEEEccCCcccC
Q 004268 180 -PSTLYHLNQLATLCLGYNKLVGPVTKEVG-----NMKNLDRLHLNGNNLTGS----IPSTIGYLNLLDELHLSHNRLDG 249 (764)
Q Consensus 180 -~~~~~~l~~L~~L~l~~n~i~~~~~~~~~-----~l~~L~~L~L~~n~l~~~----~~~~~~~l~~L~~L~L~~n~l~~ 249 (764)
+..+..+++|++|++++|.+.......+. ..++|++|++++|.+++. .+..+..+++|++|++++|.+++
T Consensus 162 l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~ 241 (461)
T 1z7x_W 162 LASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGD 241 (461)
T ss_dssp HHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHH
T ss_pred HHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCCh
Confidence 45567789999999999998765444443 356999999999999864 46677889999999999999875
Q ss_pred CC-----CcCCcCCCCCCeEEccCCcccCC----CCccccCCCCCCeEeccCccccCCCCCCCC-----CCCccceEEcc
Q 004268 250 PI-----PPTIGNLTNLIALDLSSNQLSGL----LPREVGNLKYLASLSLNGNILIGPIPPTIG-----YLTNLTYLNLG 315 (764)
Q Consensus 250 ~~-----~~~~~~l~~L~~L~L~~n~l~~~----~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~-----~l~~L~~L~ls 315 (764)
.. +..+..+++|+.|++++|.+++. .+..+..+++|++|++++|.+.+..+..+. ..++|++|+++
T Consensus 242 ~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~ 321 (461)
T 1z7x_W 242 VGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVK 321 (461)
T ss_dssp HHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECT
T ss_pred HHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcC
Confidence 42 23334689999999999999854 456677899999999999998654333332 23699999999
Q ss_pred CCcCccC----CChhhhcccccceeeccccccccCCchhccc-----ccccceeecccccccC----CCCCCCCCCCccc
Q 004268 316 YNRLSSS----IPPELMNCSQLLNLVLSHNSLSGSIPSEIGN-----LIFFRQLDLSRNFING----TIPSQLGKIPNIS 382 (764)
Q Consensus 316 ~N~l~~~----~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~-----l~~L~~L~l~~N~l~~----~~~~~~~~l~~L~ 382 (764)
+|.+++. ++..+..+++|++|+|++|++++..+..+.. .++|+.|+|++|++++ .++..+..+++|+
T Consensus 322 ~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~ 401 (461)
T 1z7x_W 322 SCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLR 401 (461)
T ss_dssp TSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCC
T ss_pred CCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCcc
Confidence 9999865 4566778899999999999999766665543 6799999999999986 6788888899999
Q ss_pred eecCCCCccccc--------cCCccccCccccccCCCC
Q 004268 383 AVDLSKNNLSGV--------IPASVRRIPKLIVSENNL 412 (764)
Q Consensus 383 ~l~l~~N~l~~~--------~~~~~~~~~~~~~~~n~~ 412 (764)
.|++++|+++.. +|.....++.+.+.++..
T Consensus 402 ~L~l~~N~i~~~~~~~l~~~l~~~~~~L~~L~~~~~~~ 439 (461)
T 1z7x_W 402 ELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYW 439 (461)
T ss_dssp EEECCSSSCCHHHHHHHHHHHTSTTCCCCEEECTTCCC
T ss_pred EEECCCCCCCHHHHHHHHHHhccCCcchhheeeccccc
Confidence 999999999854 444455677776655544
No 288
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=1.1e-33 Score=301.35 Aligned_cols=200 Identities=26% Similarity=0.413 Sum_probs=171.5
Q ss_pred hhcCCcceeeeecCceeEEEEEEC-CC-CEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCc------eeeEeeEEee
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLS-SG-KLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRN------IVKLYGFCLH 578 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~-~~-~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpn------iv~~~~~~~~ 578 (764)
.++|++.+.||+|+||+||+|... ++ +.||+|++... ....+.+.+|++++++++|++ ++.+++++..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~ 93 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV----GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNF 93 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC----HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEE
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc----ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeee
Confidence 578999999999999999999864 44 68999998643 233477889999999997665 9999999999
Q ss_pred CCEEEEEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeee------------
Q 004268 579 NKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILL------------ 646 (764)
Q Consensus 579 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll------------ 646 (764)
.+..++||||+ ++++.+++... ....+++..+..++.||+.||+||| ++||+||||||+||++
T Consensus 94 ~~~~~lv~e~~-~~~l~~~l~~~-~~~~~~~~~~~~i~~qi~~~L~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~~~~ 168 (355)
T 2eu9_A 94 HGHMCIAFELL-GKNTFEFLKEN-NFQPYPLPHVRHMAYQLCHALRFLH---ENQLTHTDLKPENILFVNSEFETLYNEH 168 (355)
T ss_dssp TTEEEEEEECC-CCBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEESCCCEEEEECCC
T ss_pred CCeEEEEEecc-CCChHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEeccccccccccc
Confidence 99999999999 55676776543 2345899999999999999999999 9999999999999999
Q ss_pred -------cCCCCEEEeeeccccccCCCCCCceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccc
Q 004268 647 -------NSNLEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSS 718 (764)
Q Consensus 647 -------~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~ 718 (764)
+.++.+||+|||.+...... .....||+.|+|||++.+..++.++||||+||++|+|++|+.||.....
T Consensus 169 ~~~~~~~~~~~~~kl~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~ 244 (355)
T 2eu9_A 169 KSCEEKSVKNTSIRVADFGSATFDHEH---HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHEN 244 (355)
T ss_dssp -CCCEEEESCCCEEECCCTTCEETTSC---CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred ccccccccCCCcEEEeecCcccccccc---ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCH
Confidence 56789999999999865432 2345789999999999999999999999999999999999999986543
No 289
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=1.6e-34 Score=310.04 Aligned_cols=199 Identities=21% Similarity=0.355 Sum_probs=168.9
Q ss_pred hhcCCcceeeeecCceeEEEEEE-CCCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcC-----------CCceeeEee
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQL-SSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIR-----------HRNIVKLYG 574 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-----------hpniv~~~~ 574 (764)
.++|++.+.||+|+||+||+|.+ .+++.||+|++.... ...+.+.+|++++++++ ||||+++++
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~ 93 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK----VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLD 93 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH----HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc----cchhhhhHHHHHHHHhhcccccchhccccchHHHHHH
Confidence 47899999999999999999986 478999999986432 23467889999999886 899999999
Q ss_pred EEeeCC----EEEEEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCC-CcEEcCCCCCCeeec--
Q 004268 575 FCLHNK----CMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKP-SIVHRDISSNNILLN-- 647 (764)
Q Consensus 575 ~~~~~~----~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~-~iiH~Dlkp~NIll~-- 647 (764)
++...+ ..++|||++ +++|.+++... ....+++..+..++.||+.||+||| ++ ||+||||||+||+++
T Consensus 94 ~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~-~~~~~~~~~~~~i~~qi~~aL~~lH---~~~~ivH~Dikp~NIll~~~ 168 (373)
T 1q8y_A 94 HFNHKGPNGVHVVMVFEVL-GENLLALIKKY-EHRGIPLIYVKQISKQLLLGLDYMH---RRCGIIHTDIKPENVLMEIV 168 (373)
T ss_dssp EEEEEETTEEEEEEEECCC-CEEHHHHHHHT-TTSCCCHHHHHHHHHHHHHHHHHHH---HTTCEECSCCSGGGEEEEEE
T ss_pred HhhccCCCCceEEEEEecC-CCCHHHHHHHh-hccCCcHHHHHHHHHHHHHHHHHHH---hcCCEEecCCChHHeEEecc
Confidence 988654 789999999 88999999753 2345899999999999999999999 87 999999999999995
Q ss_pred ----CCCCEEEeeeccccccCCCCCCceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCccc
Q 004268 648 ----SNLEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLS 717 (764)
Q Consensus 648 ----~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~ 717 (764)
..+.+||+|||.+...... .....||+.|+|||++.+..++.++||||+||++|+|++|+.||....
T Consensus 169 ~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~ 239 (373)
T 1q8y_A 169 DSPENLIQIKIADLGNACWYDEH---YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDE 239 (373)
T ss_dssp ETTTTEEEEEECCCTTCEETTBC---CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC----
T ss_pred CCCcCcceEEEcccccccccCCC---CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCc
Confidence 4458999999999876432 233578999999999999999999999999999999999999998654
No 290
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=2.9e-33 Score=287.07 Aligned_cols=211 Identities=13% Similarity=0.108 Sum_probs=177.7
Q ss_pred hhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEEEEE
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFLI 585 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 585 (764)
.++|++.+.||+|+||.||+|.+. +++.||+|++...........+.+.+|++++++++||||+++++++.+.+..|+|
T Consensus 30 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 109 (286)
T 3uqc_A 30 NGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVV 109 (286)
T ss_dssp TTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred cCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEE
Confidence 478999999999999999999875 5899999999887766666678899999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeeccccccCC
Q 004268 586 YEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLARLLHP 665 (764)
Q Consensus 586 ~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 665 (764)
|||++|++|.++++.. ....++..++.|++.||+||| ++||+||||||+||+++.++.+||+++|
T Consensus 110 ~e~~~g~~L~~~l~~~-----~~~~~~~~i~~ql~~aL~~lH---~~givH~Dikp~NIll~~~g~~kl~~~~------- 174 (286)
T 3uqc_A 110 AEWIRGGSLQEVADTS-----PSPVGAIRAMQSLAAAADAAH---RAGVALSIDHPSRVRVSIDGDVVLAYPA------- 174 (286)
T ss_dssp EECCCEEEHHHHHTTC-----CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEEETTSCEEECSCC-------
T ss_pred EEecCCCCHHHHHhcC-----CChHHHHHHHHHHHHHHHHHH---HCCCccCCCCcccEEEcCCCCEEEEecc-------
Confidence 9999999999999632 345678899999999999999 8999999999999999999999998543
Q ss_pred CCCCceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCccccccccc---CC-cC------CCCCCCcH
Q 004268 666 DSSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSSSS---GR-KI------SQNPRLDL 735 (764)
Q Consensus 666 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~~~---~~-~~------~~~~~~~~ 735 (764)
|++ .++.++||||+||++|+|+||+.||.+.+...... .. .. ...+.++.
T Consensus 175 -------------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (286)
T 3uqc_A 175 -------------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPF 234 (286)
T ss_dssp -------------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBCTTSCBCCHHHHCTTSCH
T ss_pred -------------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHHhccCCCChhhcccCCCH
Confidence 223 36789999999999999999999999776543221 11 11 12356788
Q ss_pred HHHHHHhhhhccchhhH
Q 004268 736 QCNAYLKNFSQGNHRWE 752 (764)
Q Consensus 736 ~~~~~~~~~l~~~~~~~ 752 (764)
.+.+++.+|++.+..-|
T Consensus 235 ~l~~li~~~l~~dP~~R 251 (286)
T 3uqc_A 235 QISAVAARSVQGDGGIR 251 (286)
T ss_dssp HHHHHHHHHHCTTSSCC
T ss_pred HHHHHHHHHcccCCccC
Confidence 99999999998774433
No 291
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=1.2e-33 Score=295.97 Aligned_cols=234 Identities=21% Similarity=0.311 Sum_probs=172.6
Q ss_pred hhcCCcceeeeecCceeEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEEEEE
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFLI 585 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 585 (764)
.++|++.+.||+|+||.||+|.+. +|+.||+|++....... ...+.+..+..+++.++||||+++++++.+.+..++|
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv 102 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKE-ENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIA 102 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHH-HHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccch-HHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEE
Confidence 578999999999999999999875 79999999997654332 2234455555678888999999999999999999999
Q ss_pred EEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCC-CcEEcCCCCCCeeecCCCCEEEeeeccccccC
Q 004268 586 YEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKP-SIVHRDISSNNILLNSNLEAFVADFGLARLLH 664 (764)
Q Consensus 586 ~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~-~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~ 664 (764)
|||+ ++.+..+... ....+++..+..++.|++.||+||| ++ ||+||||||+||+++.++.+||+|||.+....
T Consensus 103 ~e~~-~~~~~~l~~~--~~~~~~~~~~~~~~~~i~~~l~~lH---~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~ 176 (318)
T 2dyl_A 103 MELM-GTCAEKLKKR--MQGPIPERILGKMTVAIVKALYYLK---EKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLV 176 (318)
T ss_dssp ECCC-SEEHHHHHHH--HTSCCCHHHHHHHHHHHHHHHHHHH---HHHCCCCCCCCGGGEEECTTSCEEECCCTTC----
T ss_pred Eecc-CCcHHHHHHH--hccCCCHHHHHHHHHHHHHHHHHHH---hhCCEEeCCCCHHHEEECCCCCEEEEECCCchhcc
Confidence 9999 4566555542 2346899999999999999999999 74 99999999999999999999999999997664
Q ss_pred CCCCCceecccccccccccccc-----cCCCCccchHHHHHHHHHHHHhCCCCCCcccccc-c------ccCCcCCCCCC
Q 004268 665 PDSSNRTLVVGTYGYIAPELAY-----TMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLS-S------SSGRKISQNPR 732 (764)
Q Consensus 665 ~~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~-~------~~~~~~~~~~~ 732 (764)
... ......+++.|+|||++. +..++.++||||+|+++|+|++|+.||....... . ...........
T Consensus 177 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (318)
T 2dyl_A 177 DDK-AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHMG 255 (318)
T ss_dssp -----------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSCCCCCCSSSC
T ss_pred CCc-cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccCCCCCCccCC
Confidence 332 223457899999999984 5568899999999999999999999998643211 0 01111222335
Q ss_pred CcHHHHHHHhhhhccc
Q 004268 733 LDLQCNAYLKNFSQGN 748 (764)
Q Consensus 733 ~~~~~~~~~~~~l~~~ 748 (764)
++..+.++++.|++.+
T Consensus 256 ~~~~l~~li~~~l~~d 271 (318)
T 2dyl_A 256 FSGDFQSFVKDCLTKD 271 (318)
T ss_dssp CCHHHHHHHHHHTCSC
T ss_pred CCHHHHHHHHHHccCC
Confidence 7889999999999877
No 292
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=9e-35 Score=304.73 Aligned_cols=235 Identities=22% Similarity=0.358 Sum_probs=186.8
Q ss_pred HhhcCCcceeeeecCceeEEEEEECCCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEEEEE
Q 004268 506 ATEDFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFLI 585 (764)
Q Consensus 506 ~~~~y~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 585 (764)
..++|++.+.||+|+||+||+|.... .||+|++....... ...+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 31 ~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv 107 (319)
T 2y4i_B 31 PFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNE-DQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAII 107 (319)
T ss_dssp CCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCC-CCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEE
T ss_pred CHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCH-HHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEE
Confidence 46789999999999999999998753 49999987644322 1125577899999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeeccccccCC
Q 004268 586 YEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLARLLHP 665 (764)
Q Consensus 586 ~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 665 (764)
|||+++++|.+++... ...+++..+..++.|++.||+||| ++||+||||||+||+++ ++.+||+|||++.....
T Consensus 108 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~ 181 (319)
T 2y4i_B 108 TSLCKGRTLYSVVRDA--KIVLDVNKTRQIAQEIVKGMGYLH---AKGILHKDLKSKNVFYD-NGKVVITDFGLFSISGV 181 (319)
T ss_dssp CBCCCSEEHHHHTTSS--CCCCCSHHHHHHHHHHHHHHHHHH---HTTCCCCCCCSTTEEEC---CCEECCCSCCC----
T ss_pred eecccCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHH---hCCccccCCChhhEEEe-CCCEEEeecCCcccccc
Confidence 9999999999999743 345889999999999999999999 88999999999999998 67999999999875432
Q ss_pred C-----CCCceeccccccccccccccc---------CCCCccchHHHHHHHHHHHHhCCCCCCccccccccc-----CCc
Q 004268 666 D-----SSNRTLVVGTYGYIAPELAYT---------MAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSSSS-----GRK 726 (764)
Q Consensus 666 ~-----~~~~~~~~g~~~y~aPE~~~~---------~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~~~-----~~~ 726 (764)
. ........|++.|+|||++.+ ..++.++||||+|+++|+|++|+.||.......... ...
T Consensus 182 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~ 261 (319)
T 2y4i_B 182 LQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMKP 261 (319)
T ss_dssp ------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHHHHTTCCC
T ss_pred ccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhccCCCC
Confidence 1 122233568999999999875 357889999999999999999999998765432111 111
Q ss_pred CCCCCCCcHHHHHHHhhhhccch
Q 004268 727 ISQNPRLDLQCNAYLKNFSQGNH 749 (764)
Q Consensus 727 ~~~~~~~~~~~~~~~~~~l~~~~ 749 (764)
.......+..+.++++.|++.++
T Consensus 262 ~~~~~~~~~~l~~li~~~l~~~p 284 (319)
T 2y4i_B 262 NLSQIGMGKEISDILLFCWAFEQ 284 (319)
T ss_dssp CCCCSSCCTTHHHHHHHHHCSST
T ss_pred CCCcCCCCHHHHHHHHHHhcCCh
Confidence 11223467889999999998773
No 293
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=5.6e-35 Score=308.32 Aligned_cols=229 Identities=16% Similarity=0.178 Sum_probs=178.9
Q ss_pred hhcCCcceeeeecCceeEEEEEECCCCEEEEEEccCCCCC-----cHHHHHHHHHHHHHHHhcC---------CCceeeE
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETE-----EPAFLESFQTEARLLSQIR---------HRNIVKL 572 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~~~~E~~~l~~l~---------hpniv~~ 572 (764)
.++|++.+.||+|+||+||+|++ +|+.||+|++...... .....+.+.+|+++++.++ ||||+++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 57899999999999999999988 6899999999765432 1222367889999999986 6666666
Q ss_pred eeEE-----------------ee-------------CCEEEEEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHH
Q 004268 573 YGFC-----------------LH-------------NKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHA 622 (764)
Q Consensus 573 ~~~~-----------------~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~a 622 (764)
.+++ .+ .+..|+||||+++|++.+.+.+ ..+++..++.++.||+.|
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~----~~~~~~~~~~i~~qi~~a 173 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT----KLSSLATAKSILHQLTAS 173 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT----TCCCHHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh----cCCCHHHHHHHHHHHHHH
Confidence 6543 32 6789999999999976666642 357899999999999999
Q ss_pred HHHHHhcCCCCcEEcCCCCCCeeecCCC--------------------CEEEeeeccccccCCCCCCceecccccccccc
Q 004268 623 LSYLHYDCKPSIVHRDISSNNILLNSNL--------------------EAFVADFGLARLLHPDSSNRTLVVGTYGYIAP 682 (764)
Q Consensus 623 L~~LH~~~~~~iiH~Dlkp~NIll~~~~--------------------~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aP 682 (764)
|+|||. ++||+||||||+|||++.++ .+||+|||+|+..... ..+||+.|+||
T Consensus 174 L~~lH~--~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-----~~~gt~~y~aP 246 (336)
T 2vuw_A 174 LAVAEA--SLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-----IVVFCDVSMDE 246 (336)
T ss_dssp HHHHHH--HHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-----EEECCCCTTCS
T ss_pred HHHHHH--hCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-----cEEEeecccCh
Confidence 999993 35999999999999999887 8999999999876532 35799999999
Q ss_pred cccccCCCCccchHHHHHHH-HHHHHhCCCCCCcccc----cccc---cCCcCCC----CCCCcHHHHHHHhhhhccc
Q 004268 683 ELAYTMAVTEKCDVYSFGVV-ALEVLMGSHPTDLLSS----LSSS---SGRKISQ----NPRLDLQCNAYLKNFSQGN 748 (764)
Q Consensus 683 E~~~~~~~~~~~DiwslG~i-l~~lltg~~Pf~~~~~----~~~~---~~~~~~~----~~~~~~~~~~~~~~~l~~~ 748 (764)
|++.+.. +.++||||+|++ .+++++|..||..... .+.. ....... .+.++..+.+++++|++.+
T Consensus 247 E~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~d 323 (336)
T 2vuw_A 247 DLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEFHRTMLNFS 323 (336)
T ss_dssp GGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTCCCSSCCCSHHHHHHHHHHHHHHHHGGGSS
T ss_pred hhhcCCC-ccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhhccCcccchhhhhhcCHHHHHHHHHHhccC
Confidence 9998776 899999998777 7889999999975311 0000 0111111 2235778999999999977
No 294
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.4e-33 Score=325.19 Aligned_cols=223 Identities=23% Similarity=0.325 Sum_probs=183.0
Q ss_pred hhcCCcceeeeecCceeEEEEEEC--CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCE---
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLS--SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCLHNKC--- 581 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~--- 581 (764)
.++|++.+.||+|+||+||+|.+. +|+.||+|++.... .....+.+.+|++++++++||||+++++++...+.
T Consensus 79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~ 156 (681)
T 2pzi_A 79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSG--DAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGD 156 (681)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSC--CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSC
T ss_pred CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccC--CHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCC
Confidence 478999999999999999999865 68999999987543 23445778999999999999999999999987655
Q ss_pred --EEEEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeecc
Q 004268 582 --MFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGL 659 (764)
Q Consensus 582 --~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~ 659 (764)
.|+||||+++++|.+++.. .+++..+..++.||+.||+||| ++||+||||||+||+++.+ .+||+|||+
T Consensus 157 ~~~~lv~E~~~g~~L~~~~~~-----~l~~~~~~~~~~qi~~aL~~lH---~~giiHrDlkp~NIll~~~-~~kl~DFG~ 227 (681)
T 2pzi_A 157 PVGYIVMEYVGGQSLKRSKGQ-----KLPVAEAIAYLLEILPALSYLH---SIGLVYNDLKPENIMLTEE-QLKLIDLGA 227 (681)
T ss_dssp EEEEEEEECCCCEECC----C-----CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECSS-CEEECCCTT
T ss_pred ceeEEEEEeCCCCcHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHH---HCCCeecccChHHeEEeCC-cEEEEeccc
Confidence 7999999999999887753 5899999999999999999999 8999999999999999875 999999999
Q ss_pred ccccCCCCCCceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccccccccCCcCCCCCCCcHHHHH
Q 004268 660 ARLLHPDSSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSSSSGRKISQNPRLDLQCNA 739 (764)
Q Consensus 660 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 739 (764)
++..... ....||+.|+|||++.+. ++.++||||+||++|+|++|..||.+....... ........+..+.+
T Consensus 228 a~~~~~~----~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~~---~~~~~~~~~~~l~~ 299 (681)
T 2pzi_A 228 VSRINSF----GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYVDGLP---EDDPVLKTYDSYGR 299 (681)
T ss_dssp CEETTCC----SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEECSSCC---TTCHHHHHCHHHHH
T ss_pred chhcccC----CccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCccccccccc---ccccccccCHHHHH
Confidence 9876533 345789999999998765 488999999999999999999998864322111 00011113467889
Q ss_pred HHhhhhccc
Q 004268 740 YLKNFSQGN 748 (764)
Q Consensus 740 ~~~~~l~~~ 748 (764)
++.+|++.+
T Consensus 300 li~~~l~~d 308 (681)
T 2pzi_A 300 LLRRAIDPD 308 (681)
T ss_dssp HHHHHTCSS
T ss_pred HHhhhccCC
Confidence 999999887
No 295
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=6.6e-33 Score=288.53 Aligned_cols=248 Identities=30% Similarity=0.519 Sum_probs=145.3
Q ss_pred CeeEEEeCCCCccc--cCCccccCCCCCcEEEcCC-CcCcccCCccccCCCCCCEEEccCCcCcccCCcccCCCCCCCEE
Q 004268 20 NLVTFRIWGTLLSG--RMPSEIGALSKLEKLVLSH-NSLTGRIPSEIGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLDL 96 (764)
Q Consensus 20 ~l~~L~l~~~~~~~--~~~~~~~~l~~L~~L~Ls~-n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L 96 (764)
+++.|++++|.+++ .+|+.+..+++|++|+|++ |.+++..|..|..+++|++|+|++|++++..|..|..+++|++|
T Consensus 51 ~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L 130 (313)
T 1ogq_A 51 RVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTL 130 (313)
T ss_dssp CEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEE
T ss_pred eEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEE
Confidence 45556666665555 5555555555566666653 55555555555555555555555555555555555555555555
Q ss_pred ecCCCcccccCCccCcCCCCCCEEEccCCcCcccCCccccCCC-CcCEEecccCcccccCCccccCCCCCCeeecccCCC
Q 004268 97 NLSNNILNGSIPLEFGNLKDLDQLRLQGNKLDGLIPSSIGNLT-NLTYLDLSLNQLSGRLPQEVGNLKNLKSLFLDNNHL 175 (764)
Q Consensus 97 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~-~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i 175 (764)
+|++|.+++..|..|..+++|++|+|++|++++..|..+..++ +|++|+|++|++++..|..|..++ |+.|++++|.+
T Consensus 131 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l 209 (313)
T 1ogq_A 131 DFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNML 209 (313)
T ss_dssp ECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEE
T ss_pred eCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcc
Confidence 5555555555555555555555555555555544555555554 555555555555545555555444 55555555544
Q ss_pred CCCCCCccccCCCccEEEecCccCcCCcccccCCccccceeeccCcccccccCccccCCCCCCEEEccCCcccCCCCcCC
Q 004268 176 SGPIPSTLYHLNQLATLCLGYNKLVGPVTKEVGNMKNLDRLHLNGNNLTGSIPSTIGYLNLLDELHLSHNRLDGPIPPTI 255 (764)
Q Consensus 176 ~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 255 (764)
....+..+..+++|+.|++++|.+++..+. +..+++|++|+|++|.+++..|..|
T Consensus 210 ------------------------~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l 264 (313)
T 1ogq_A 210 ------------------------EGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGL 264 (313)
T ss_dssp ------------------------EECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGG
T ss_pred ------------------------cCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHH
Confidence 444444555555555555555555544333 5556666666666666666666666
Q ss_pred cCCCCCCeEEccCCcccCCCCccccCCCCCCeEeccCcc
Q 004268 256 GNLTNLIALDLSSNQLSGLLPREVGNLKYLASLSLNGNI 294 (764)
Q Consensus 256 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 294 (764)
..+++|+.|+|++|++++..|.. ..+++|+.|++++|.
T Consensus 265 ~~l~~L~~L~Ls~N~l~~~ip~~-~~l~~L~~l~l~~N~ 302 (313)
T 1ogq_A 265 TQLKFLHSLNVSFNNLCGEIPQG-GNLQRFDVSAYANNK 302 (313)
T ss_dssp GGCTTCCEEECCSSEEEEECCCS-TTGGGSCGGGTCSSS
T ss_pred hcCcCCCEEECcCCcccccCCCC-ccccccChHHhcCCC
Confidence 66777777777777776555554 666677777777776
No 296
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=5.8e-33 Score=288.97 Aligned_cols=249 Identities=29% Similarity=0.485 Sum_probs=161.9
Q ss_pred CCCEEEccCCcCcc--cCCccccCCCCcCEEeccc-CcccccCCccccCCCCCCeeecccCCCCCCCCCccccCCCccEE
Q 004268 116 DLDQLRLQGNKLDG--LIPSSIGNLTNLTYLDLSL-NQLSGRLPQEVGNLKNLKSLFLDNNHLSGPIPSTLYHLNQLATL 192 (764)
Q Consensus 116 ~L~~L~L~~n~l~~--~~~~~~~~l~~L~~L~L~~-n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L 192 (764)
+++.|+|++|.+.+ ..|..|.++++|++|+|++ |.+.+..|..|.++++|++|+|++|.+++.
T Consensus 51 ~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~-------------- 116 (313)
T 1ogq_A 51 RVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGA-------------- 116 (313)
T ss_dssp CEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEE--------------
T ss_pred eEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCc--------------
Confidence 45555555555554 4445555555555555553 555444444555555555555555544433
Q ss_pred EecCccCcCCcccccCCccccceeeccCcccccccCccccCCCCCCEEEccCCcccCCCCcCCcCCC-CCCeEEccCCcc
Q 004268 193 CLGYNKLVGPVTKEVGNMKNLDRLHLNGNNLTGSIPSTIGYLNLLDELHLSHNRLDGPIPPTIGNLT-NLIALDLSSNQL 271 (764)
Q Consensus 193 ~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~-~L~~L~L~~n~l 271 (764)
.+..|..+++|++|++++|.+++..|..+..+++|++|++++|.+++..|..+..++ +|+.|+|++|++
T Consensus 117 ----------~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l 186 (313)
T 1ogq_A 117 ----------IPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRL 186 (313)
T ss_dssp ----------CCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEE
T ss_pred ----------CCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCee
Confidence 344455555555555555655555566666666666666666666655666666665 677777777777
Q ss_pred cCCCCccccCCCCCCeEeccCccccCCCCCCCCCCCccceEEccCCcCccCCChhhhcccccceeeccccccccCCchhc
Q 004268 272 SGLLPREVGNLKYLASLSLNGNILIGPIPPTIGYLTNLTYLNLGYNRLSSSIPPELMNCSQLLNLVLSHNSLSGSIPSEI 351 (764)
Q Consensus 272 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~ 351 (764)
++..|..+..+. |+.|++++|.+.+..|..+..+++|++|+|++|++++..|. +..+++|++|+|++|++++.+|..+
T Consensus 187 ~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l 264 (313)
T 1ogq_A 187 TGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGL 264 (313)
T ss_dssp EEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGG
T ss_pred eccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHH
Confidence 666666666665 77777777777766666777777777777777777744433 6667778888888888877777778
Q ss_pred ccccccceeecccccccCCCCCCCCCCCccceecCCCCcc
Q 004268 352 GNLIFFRQLDLSRNFINGTIPSQLGKIPNISAVDLSKNNL 391 (764)
Q Consensus 352 ~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l 391 (764)
..+++|+.|+|++|++++.+|.. ..+++|+.+++++|+.
T Consensus 265 ~~l~~L~~L~Ls~N~l~~~ip~~-~~l~~L~~l~l~~N~~ 303 (313)
T 1ogq_A 265 TQLKFLHSLNVSFNNLCGEIPQG-GNLQRFDVSAYANNKC 303 (313)
T ss_dssp GGCTTCCEEECCSSEEEEECCCS-TTGGGSCGGGTCSSSE
T ss_pred hcCcCCCEEECcCCcccccCCCC-ccccccChHHhcCCCC
Confidence 88888888888888887777765 7778888888888873
No 297
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=5.1e-33 Score=300.92 Aligned_cols=233 Identities=16% Similarity=0.183 Sum_probs=177.0
Q ss_pred hcCCcceeeeecCceeEEEEEE-CCCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCC-Cce----------------
Q 004268 508 EDFHIKYCIGTGGYGSVYRAQL-SSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRH-RNI---------------- 569 (764)
Q Consensus 508 ~~y~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h-pni---------------- 569 (764)
..|...+.||+|+||+||+|.+ .+|+.||||++...........+.+.+|+.+++.++| ++.
T Consensus 78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 157 (413)
T 3dzo_A 78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV 157 (413)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEE
T ss_pred eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhc
Confidence 4588889999999999999985 4799999999885554444445788999999999976 211
Q ss_pred -----eeEeeEEee-----CCEEEEEEEecCCCCHHHHHhc----CccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcE
Q 004268 570 -----VKLYGFCLH-----NKCMFLIYEYMERGSLFCVLRN----DVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIV 635 (764)
Q Consensus 570 -----v~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~----~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ii 635 (764)
..+..++.. ....+++|+++ +++|.++++. ......+++..+..++.||+.||+||| ++||+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ii 233 (413)
T 3dzo_A 158 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH---HYGLV 233 (413)
T ss_dssp ECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHH---HTTEE
T ss_pred ccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHH---hCCcc
Confidence 111111111 12357777766 5799988842 112445788889999999999999999 89999
Q ss_pred EcCCCCCCeeecCCCCEEEeeeccccccCCCCCCceeccccccccccccc----------ccCCCCccchHHHHHHHHHH
Q 004268 636 HRDISSNNILLNSNLEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELA----------YTMAVTEKCDVYSFGVVALE 705 (764)
Q Consensus 636 H~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~----------~~~~~~~~~DiwslG~il~~ 705 (764)
||||||+|||++.++.+||+|||+++..... ....+| +.|+|||++ .+..++.++||||+||++|+
T Consensus 234 HrDiKp~NILl~~~~~~kL~DFG~a~~~~~~---~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~e 309 (413)
T 3dzo_A 234 HTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS---AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYW 309 (413)
T ss_dssp CSCCCGGGEEECTTCCEEECCGGGCEETTEE---ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHH
T ss_pred cCCcccceEEEecCCeEEEEeccceeecCCc---cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHH
Confidence 9999999999999999999999998765432 334567 999999998 56668899999999999999
Q ss_pred HHhCCCCCCcccccccccCCcCCCCCCCcHHHHHHHhhhhccch
Q 004268 706 VLMGSHPTDLLSSLSSSSGRKISQNPRLDLQCNAYLKNFSQGNH 749 (764)
Q Consensus 706 lltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 749 (764)
|++|+.||.......... ......+.++..+.+++++|++.++
T Consensus 310 lltg~~Pf~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~dP 352 (413)
T 3dzo_A 310 IWCADLPNTDDAALGGSE-WIFRSCKNIPQPVRALLEGFLRYPK 352 (413)
T ss_dssp HHHSSCCCCTTGGGSCSG-GGGSSCCCCCHHHHHHHHHHTCSSG
T ss_pred HHHCCCCCCCcchhhhHH-HHHhhcccCCHHHHHHHHHHccCCh
Confidence 999999998766543322 2233445788999999999999873
No 298
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=5.6e-32 Score=280.31 Aligned_cols=209 Identities=23% Similarity=0.395 Sum_probs=169.2
Q ss_pred HhhcCCcc-eeeeecCceeEEEEEE-CCCCEEEEEEccCCCCCcHHHHHHHHHHHHHH-HhcCCCceeeEeeEEee----
Q 004268 506 ATEDFHIK-YCIGTGGYGSVYRAQL-SSGKLVALKKLHRSETEEPAFLESFQTEARLL-SQIRHRNIVKLYGFCLH---- 578 (764)
Q Consensus 506 ~~~~y~~~-~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l-~~l~hpniv~~~~~~~~---- 578 (764)
..++|.+. +.||+|+||.||+|.. .+++.||+|++... ..+.+|++++ +..+||||+++++++..
T Consensus 15 ~~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--------~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~ 86 (299)
T 3m2w_A 15 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC--------PKARREVELHWRASQCPHIVRIVDVYENLYAG 86 (299)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS--------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETT
T ss_pred cccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc--------HHHHHHHHHHHHhccCCCchhHHhhhhhhcCC
Confidence 35778887 7799999999999986 47899999998642 4567888888 55599999999999887
Q ss_pred CCEEEEEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecC---CCCEEEe
Q 004268 579 NKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNS---NLEAFVA 655 (764)
Q Consensus 579 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~---~~~~kl~ 655 (764)
....++||||+++++|.+++... ....+++..+..++.|++.||+||| ++||+||||||+||+++. ++.+||+
T Consensus 87 ~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~~~kl~ 162 (299)
T 3m2w_A 87 RKCLLIVMECLDGGELFSRIQDR-GDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLT 162 (299)
T ss_dssp EEEEEEEECCCCSCBHHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSTTCCEEEC
T ss_pred CceEEEEEeecCCCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEecCCCCCcEEEe
Confidence 67799999999999999999754 2346899999999999999999999 899999999999999997 7899999
Q ss_pred eeccccccCCCCCCceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCccccccccc----CC---cCC
Q 004268 656 DFGLARLLHPDSSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSSSS----GR---KIS 728 (764)
Q Consensus 656 Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~~~----~~---~~~ 728 (764)
|||++.... +..++.++||||+||++|+|++|+.||.......... .. ...
T Consensus 163 Dfg~a~~~~----------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~ 220 (299)
T 3m2w_A 163 DFGFAKETT----------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYE 220 (299)
T ss_dssp CCTTCEECT----------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCCSSCTTCCS
T ss_pred ccccccccc----------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHHHHhhcccc
Confidence 999986532 2346789999999999999999999997665432211 11 111
Q ss_pred CC----CCCcHHHHHHHhhhhccc
Q 004268 729 QN----PRLDLQCNAYLKNFSQGN 748 (764)
Q Consensus 729 ~~----~~~~~~~~~~~~~~l~~~ 748 (764)
.+ ..++..+.+++++|++.+
T Consensus 221 ~~~~~~~~~~~~~~~li~~~l~~d 244 (299)
T 3m2w_A 221 FPNPEWSEVSEEVKMLIRNLLKTE 244 (299)
T ss_dssp SCHHHHTTSCHHHHHHHHHHTCSS
T ss_pred CCchhcccCCHHHHHHHHHHcccC
Confidence 11 456889999999999877
No 299
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.97 E-value=3.4e-31 Score=281.28 Aligned_cols=277 Identities=22% Similarity=0.185 Sum_probs=166.0
Q ss_pred CCCCCcEEEcCCCcCcccCCccccCCCCCCEEEccCCcCcccCCcccCCCCCCCEEecCCCcccccCCccCcCCCCCCEE
Q 004268 41 ALSKLEKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLDLNLSNNILNGSIPLEFGNLKDLDQL 120 (764)
Q Consensus 41 ~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 120 (764)
.|+.....+++++.++. +|..+. ++|++|+|++|++++..+..|..+++|++|+|++|.++++.+.+|.++++|++|
T Consensus 29 ~C~~~~~c~~~~~~l~~-iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 105 (353)
T 2z80_A 29 SCDRNGICKGSSGSLNS-IPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHL 105 (353)
T ss_dssp EECTTSEEECCSTTCSS-CCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred CCCCCeEeeCCCCCccc-cccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEE
Confidence 34444556666666663 343333 366777777777665555566667777777777777766666666677777777
Q ss_pred EccCCcCcccCCccccCCCCcCEEecccCcccccCC-ccccCCCCCCeeecccC-CCCCCCCCccccCCCccEEEecCcc
Q 004268 121 RLQGNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLP-QEVGNLKNLKSLFLDNN-HLSGPIPSTLYHLNQLATLCLGYNK 198 (764)
Q Consensus 121 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~n-~i~~~~~~~~~~l~~L~~L~l~~n~ 198 (764)
+|++|+++++++..|.++++|++|+|++|+++.+.+ ..|.++++|++|++++| .++.+.+..+..+++|++|++++|.
T Consensus 106 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~ 185 (353)
T 2z80_A 106 DLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASD 185 (353)
T ss_dssp ECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETT
T ss_pred ECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCC
Confidence 777777766655556667777777777777665544 45666677777777766 3555555666666677777777776
Q ss_pred CcCCcccccCCccccceeeccCcccccccCccccCCCCCCEEEccCCcccCCCCcCCc---CCCCCCeEEccCCcccCC-
Q 004268 199 LVGPVTKEVGNMKNLDRLHLNGNNLTGSIPSTIGYLNLLDELHLSHNRLDGPIPPTIG---NLTNLIALDLSSNQLSGL- 274 (764)
Q Consensus 199 i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~---~l~~L~~L~L~~n~l~~~- 274 (764)
+....+..+..+++|++|++++|.++......+..+++|+.|++++|.+++..+..+. ....++.++|+++.+++.
T Consensus 186 l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~ 265 (353)
T 2z80_A 186 LQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDES 265 (353)
T ss_dssp CCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHHH
T ss_pred cCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccccCcc
Confidence 6666566666667777777777766644444444566677777777776654433322 244566666666665431
Q ss_pred ---CCccccCCCCCCeEeccCccccCCCCCCCCCCCccceEEccCCcCc
Q 004268 275 ---LPREVGNLKYLASLSLNGNILIGPIPPTIGYLTNLTYLNLGYNRLS 320 (764)
Q Consensus 275 ---~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~ 320 (764)
.|..+..+++|+.|++++|+++.+.+..|..+++|++|+|++|++.
T Consensus 266 l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~ 314 (353)
T 2z80_A 266 LFQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWD 314 (353)
T ss_dssp HHHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred hhhhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCcc
Confidence 2334445555555555555554332222344455555555555444
No 300
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.97 E-value=3.6e-31 Score=275.33 Aligned_cols=78 Identities=31% Similarity=0.277 Sum_probs=34.3
Q ss_pred EEecCCCcccccCCccCcCCCCCCEEEccCCcCcccCCccccCCCCcCEEecccCcccccC--CccccCCCCCCeeeccc
Q 004268 95 DLNLSNNILNGSIPLEFGNLKDLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRL--PQEVGNLKNLKSLFLDN 172 (764)
Q Consensus 95 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~--~~~~~~l~~L~~L~L~~ 172 (764)
.++++++.++.+ |..+. ++|++|+|++|+++.+++..|.++++|++|+|++|+++.+. +..+.++++|++|++++
T Consensus 11 ~l~c~~~~l~~i-p~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~ 87 (306)
T 2z66_A 11 EIRCNSKGLTSV-PTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSF 87 (306)
T ss_dssp EEECCSSCCSSC-CSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCS
T ss_pred EEEcCCCCcccC-CCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCC
Confidence 445555555422 22221 34555555555555444444455555555555555544221 22333344444444444
Q ss_pred CCC
Q 004268 173 NHL 175 (764)
Q Consensus 173 n~i 175 (764)
|.+
T Consensus 88 n~i 90 (306)
T 2z66_A 88 NGV 90 (306)
T ss_dssp CSE
T ss_pred Ccc
Confidence 443
No 301
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.97 E-value=3.5e-31 Score=281.24 Aligned_cols=276 Identities=21% Similarity=0.222 Sum_probs=241.1
Q ss_pred CCeeEEEeCCCCccccCCccccCCCCCcEEEcCCCcCcccCCccccCCCCCCEEEccCCcCcccCCcccCCCCCCCEEec
Q 004268 19 PNLVTFRIWGTLLSGRMPSEIGALSKLEKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLDLNL 98 (764)
Q Consensus 19 ~~l~~L~l~~~~~~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L 98 (764)
|.....++++++++ .+|..+. ++|++|++++|+++++.+..|.++++|++|+|++|++++..+.+|..+++|++|+|
T Consensus 31 ~~~~~c~~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (353)
T 2z80_A 31 DRNGICKGSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDL 107 (353)
T ss_dssp CTTSEEECCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCeEeeCCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEEC
Confidence 44456899999998 6677665 48999999999999888889999999999999999999888889999999999999
Q ss_pred CCCcccccCCccCcCCCCCCEEEccCCcCcccCC-ccccCCCCcCEEecccC-cccccCCccccCCCCCCeeecccCCCC
Q 004268 99 SNNILNGSIPLEFGNLKDLDQLRLQGNKLDGLIP-SSIGNLTNLTYLDLSLN-QLSGRLPQEVGNLKNLKSLFLDNNHLS 176 (764)
Q Consensus 99 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~n-~l~~~~~~~~~~l~~L~~L~L~~n~i~ 176 (764)
++|.++++.+..|.++++|++|+|++|+++.+++ ..|.++++|++|++++| .+..+.+..|.++++|++|++++|.++
T Consensus 108 s~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~ 187 (353)
T 2z80_A 108 SYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQ 187 (353)
T ss_dssp CSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCC
T ss_pred CCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcC
Confidence 9999997777779999999999999999998766 68999999999999999 588788889999999999999999999
Q ss_pred CCCCCccccCCCccEEEecCccCcCCcccccCCccccceeeccCcccccccCcccc---CCCCCCEEEccCCcccCC---
Q 004268 177 GPIPSTLYHLNQLATLCLGYNKLVGPVTKEVGNMKNLDRLHLNGNNLTGSIPSTIG---YLNLLDELHLSHNRLDGP--- 250 (764)
Q Consensus 177 ~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~---~l~~L~~L~L~~n~l~~~--- 250 (764)
+..+..+..+++|++|++++|.+..+....+..+++|++|++++|.+++..+..+. ....++.++|+++.+.+.
T Consensus 188 ~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~ 267 (353)
T 2z80_A 188 SYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLF 267 (353)
T ss_dssp EECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHHHHH
T ss_pred ccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccccCcchh
Confidence 88889999999999999999999877766677789999999999999976655443 456788999999988752
Q ss_pred -CCcCCcCCCCCCeEEccCCcccCCCCccccCCCCCCeEeccCccccC
Q 004268 251 -IPPTIGNLTNLIALDLSSNQLSGLLPREVGNLKYLASLSLNGNILIG 297 (764)
Q Consensus 251 -~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 297 (764)
.|..+..+++|+.|+|++|+++.+.+..|..+++|+.|++++|.+..
T Consensus 268 ~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~ 315 (353)
T 2z80_A 268 QVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 315 (353)
T ss_dssp HHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred hhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccC
Confidence 45678889999999999999997666667999999999999999864
No 302
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.97 E-value=1.3e-30 Score=271.12 Aligned_cols=279 Identities=22% Similarity=0.218 Sum_probs=155.0
Q ss_pred cEEEcCCCcCcccCCccccCCCCCCEEEccCCcCcccCCcccCCCCCCCEEecCCCcccccC--CccCcCCCCCCEEEcc
Q 004268 46 EKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLDLNLSNNILNGSI--PLEFGNLKDLDQLRLQ 123 (764)
Q Consensus 46 ~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~--~~~~~~l~~L~~L~L~ 123 (764)
+.++++++.++ .+|..+. ++|++|+|++|+++...+..|..+++|++|+|++|.++.+. +..+.++++|++|+|+
T Consensus 10 ~~l~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls 86 (306)
T 2z66_A 10 TEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLS 86 (306)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECC
T ss_pred CEEEcCCCCcc-cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECC
Confidence 35666666665 3333332 45666666666665444444555666666666666555321 3344445555555555
Q ss_pred CCcCcccCCccccCCCCcCEEecccCcccccCC-ccccCCCCCCeeecccCCCCCCCCCccccCCCccEEEecCccCcCC
Q 004268 124 GNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLP-QEVGNLKNLKSLFLDNNHLSGPIPSTLYHLNQLATLCLGYNKLVGP 202 (764)
Q Consensus 124 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~ 202 (764)
+|.+..+ +..+.++++|++|++++|+++++.+ ..+.+ +++|++|++++|.+...
T Consensus 87 ~n~i~~l-~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~------------------------l~~L~~L~l~~n~l~~~ 141 (306)
T 2z66_A 87 FNGVITM-SSNFLGLEQLEHLDFQHSNLKQMSEFSVFLS------------------------LRNLIYLDISHTHTRVA 141 (306)
T ss_dssp SCSEEEE-EEEEETCTTCCEEECTTSEEESSTTTTTTTT------------------------CTTCCEEECTTSCCEEC
T ss_pred CCccccC-hhhcCCCCCCCEEECCCCcccccccchhhhh------------------------ccCCCEEECCCCcCCcc
Confidence 5555532 2334555555555555555543332 33444 44444444444444444
Q ss_pred cccccCCccccceeeccCccccc-ccCccccCCCCCCEEEccCCcccCCCCcCCcCCCCCCeEEccCCcccCCCCccccC
Q 004268 203 VTKEVGNMKNLDRLHLNGNNLTG-SIPSTIGYLNLLDELHLSHNRLDGPIPPTIGNLTNLIALDLSSNQLSGLLPREVGN 281 (764)
Q Consensus 203 ~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 281 (764)
.+..+..+++|++|++++|.+++ ..|..+..+++|+.|++++|.+++..+..|..+++|+.|+|++|.+++..+..+..
T Consensus 142 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 221 (306)
T 2z66_A 142 FNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKC 221 (306)
T ss_dssp STTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTT
T ss_pred chhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccC
Confidence 44445555666666666666654 45566666677777777777776666666777777777777777776666666666
Q ss_pred CCCCCeEeccCccccCCCCCCCCCCC-ccceEEccCCcCccCCC--hhhhcccccceeeccccccccCCchhcc
Q 004268 282 LKYLASLSLNGNILIGPIPPTIGYLT-NLTYLNLGYNRLSSSIP--PELMNCSQLLNLVLSHNSLSGSIPSEIG 352 (764)
Q Consensus 282 l~~L~~L~l~~n~l~~~~~~~~~~l~-~L~~L~ls~N~l~~~~~--~~~~~l~~L~~L~ls~N~l~~~~~~~~~ 352 (764)
+++|+.|++++|++.+..+..+..++ +|++|+|++|.++..-. .....+...+.+....+.+....|..+.
T Consensus 222 l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~~~~~~~~l~~~~~~~~~~~~~~C~~p~~~~ 295 (306)
T 2z66_A 222 LNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERMECATPSDKQ 295 (306)
T ss_dssp CTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGGGHHHHHHHHHTGGGBSCGGGCBEEESGGGT
T ss_pred cccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecccChHHHHHHHHhhhhhhccccccccCCchhhC
Confidence 77777777777777666666666663 67777777777663211 1112233334444444555444444443
No 303
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.97 E-value=7.1e-30 Score=280.57 Aligned_cols=248 Identities=23% Similarity=0.262 Sum_probs=199.8
Q ss_pred CCcEEEcCCCcCcccCCccccCCCCCCEEEccCCcCcccCCcccCCCCCCCEEecCCCcccccCCccCcCCCCCCEEEcc
Q 004268 44 KLEKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLDLNLSNNILNGSIPLEFGNLKDLDQLRLQ 123 (764)
Q Consensus 44 ~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 123 (764)
....++.+++.++ .+|..+. ++|++|+|++|+|++..+..|..+++|++|+|++|.++++.+..|.++++|++|+|+
T Consensus 55 ~~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~ 131 (452)
T 3zyi_A 55 QFSKVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELF 131 (452)
T ss_dssp SSCEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCcEEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECC
Confidence 4567777777777 3454444 577788888888877777777788888888888888877777777788888888888
Q ss_pred CCcCcccCCccccCCCCcCEEecccCcccccCCccccCCCCCCeeeccc-CCCCCCCCCccccCCCccEEEecCccCcCC
Q 004268 124 GNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNLKSLFLDN-NHLSGPIPSTLYHLNQLATLCLGYNKLVGP 202 (764)
Q Consensus 124 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~-n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~ 202 (764)
+|+++.+++..|.++++|++|+|++|+++.+.+..|.++++|+.|++++ |.+..+.+..|..+++|+.|+|++|++..+
T Consensus 132 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~ 211 (452)
T 3zyi_A 132 DNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM 211 (452)
T ss_dssp SSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC
T ss_pred CCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc
Confidence 8888777777777788888888888888777777777888888888877 455556666777888888888888888765
Q ss_pred cccccCCccccceeeccCcccccccCccccCCCCCCEEEccCCcccCCCCcCCcCCCCCCeEEccCCcccCCCCccccCC
Q 004268 203 VTKEVGNMKNLDRLHLNGNNLTGSIPSTIGYLNLLDELHLSHNRLDGPIPPTIGNLTNLIALDLSSNQLSGLLPREVGNL 282 (764)
Q Consensus 203 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 282 (764)
. .+..+++|++|+|++|.+++..+..|..+++|+.|+|++|.++++.+..|..+++|+.|+|++|+++++.+..|..+
T Consensus 212 ~--~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 289 (452)
T 3zyi_A 212 P--NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPL 289 (452)
T ss_dssp C--CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTC
T ss_pred c--cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccc
Confidence 3 47788889999999999998888889999999999999999998888889999999999999999998888888999
Q ss_pred CCCCeEeccCcccc
Q 004268 283 KYLASLSLNGNILI 296 (764)
Q Consensus 283 ~~L~~L~l~~n~l~ 296 (764)
++|+.|+|++|.+.
T Consensus 290 ~~L~~L~L~~Np~~ 303 (452)
T 3zyi_A 290 RYLVELHLHHNPWN 303 (452)
T ss_dssp TTCCEEECCSSCEE
T ss_pred cCCCEEEccCCCcC
Confidence 99999999999875
No 304
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.97 E-value=6.9e-30 Score=279.62 Aligned_cols=248 Identities=23% Similarity=0.271 Sum_probs=210.0
Q ss_pred CCcEEEcCCCcCcccCCccccCCCCCCEEEccCCcCcccCCcccCCCCCCCEEecCCCcccccCCccCcCCCCCCEEEcc
Q 004268 44 KLEKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLDLNLSNNILNGSIPLEFGNLKDLDQLRLQ 123 (764)
Q Consensus 44 ~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 123 (764)
....++.+++.++ .+|..+. ++++.|+|++|+|+...+..|..+++|++|+|++|.++.+.+.+|.++++|++|+|+
T Consensus 44 ~~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~ 120 (440)
T 3zyj_A 44 QFSKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELF 120 (440)
T ss_dssp TSCEEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECC
T ss_pred CCCEEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECC
Confidence 4667888888887 4555554 578888888888887777888888888888888888887777888888888888888
Q ss_pred CCcCcccCCccccCCCCcCEEecccCcccccCCccccCCCCCCeeeccc-CCCCCCCCCccccCCCccEEEecCccCcCC
Q 004268 124 GNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNLKSLFLDN-NHLSGPIPSTLYHLNQLATLCLGYNKLVGP 202 (764)
Q Consensus 124 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~-n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~ 202 (764)
+|+++.+.+..|.++++|++|+|++|+++.+.+..|.++++|++|+|++ |.++.+.+..|..+++|++|++++|.++.+
T Consensus 121 ~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~ 200 (440)
T 3zyj_A 121 DNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREI 200 (440)
T ss_dssp SSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSSC
T ss_pred CCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCccc
Confidence 8888887777888888888888888888877777888888888888887 456656666788888888888888888865
Q ss_pred cccccCCccccceeeccCcccccccCccccCCCCCCEEEccCCcccCCCCcCCcCCCCCCeEEccCCcccCCCCccccCC
Q 004268 203 VTKEVGNMKNLDRLHLNGNNLTGSIPSTIGYLNLLDELHLSHNRLDGPIPPTIGNLTNLIALDLSSNQLSGLLPREVGNL 282 (764)
Q Consensus 203 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 282 (764)
+ .+..+++|++|+|++|.+++..+..|..+++|+.|+|++|.++++.+..|..+++|+.|+|++|+++++.+..|..+
T Consensus 201 ~--~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 278 (440)
T 3zyj_A 201 P--NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPL 278 (440)
T ss_dssp C--CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSC
T ss_pred c--ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccc
Confidence 4 47888999999999999998888999999999999999999998888999999999999999999998888889999
Q ss_pred CCCCeEeccCcccc
Q 004268 283 KYLASLSLNGNILI 296 (764)
Q Consensus 283 ~~L~~L~l~~n~l~ 296 (764)
++|+.|+|++|.+.
T Consensus 279 ~~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 279 HHLERIHLHHNPWN 292 (440)
T ss_dssp TTCCEEECCSSCEE
T ss_pred cCCCEEEcCCCCcc
Confidence 99999999999875
No 305
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.97 E-value=9.8e-30 Score=278.40 Aligned_cols=248 Identities=25% Similarity=0.256 Sum_probs=225.6
Q ss_pred CCCEEEccCCcCcccCCcccCCCCCCCEEecCCCcccccCCccCcCCCCCCEEEccCCcCcccCCccccCCCCcCEEecc
Q 004268 68 RLKVLDLSYNRLTGTIPSEIGSLRDLLDLNLSNNILNGSIPLEFGNLKDLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLS 147 (764)
Q Consensus 68 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 147 (764)
..+.++.+++.++ .+|..+. ++++.|+|++|.++.+.+..|.++++|++|+|++|.++.+.+..|.++++|++|+|+
T Consensus 44 ~~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~ 120 (440)
T 3zyj_A 44 QFSKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELF 120 (440)
T ss_dssp TSCEEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECC
T ss_pred CCCEEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECC
Confidence 4678999999998 5676665 789999999999998888999999999999999999999988999999999999999
Q ss_pred cCcccccCCccccCCCCCCeeecccCCCCCCCCCccccCCCccEEEecC-ccCcCCcccccCCccccceeeccCcccccc
Q 004268 148 LNQLSGRLPQEVGNLKNLKSLFLDNNHLSGPIPSTLYHLNQLATLCLGY-NKLVGPVTKEVGNMKNLDRLHLNGNNLTGS 226 (764)
Q Consensus 148 ~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~-n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~ 226 (764)
+|+++.+.+..|.++++|++|+|++|.++.+.+..|..+++|++|++++ |.+..+....|..+++|++|++++|+++.+
T Consensus 121 ~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~ 200 (440)
T 3zyj_A 121 DNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREI 200 (440)
T ss_dssp SSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSSC
T ss_pred CCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCccc
Confidence 9999988888899999999999999999988888999999999999998 566667777899999999999999999854
Q ss_pred cCccccCCCCCCEEEccCCcccCCCCcCCcCCCCCCeEEccCCcccCCCCccccCCCCCCeEeccCccccCCCCCCCCCC
Q 004268 227 IPSTIGYLNLLDELHLSHNRLDGPIPPTIGNLTNLIALDLSSNQLSGLLPREVGNLKYLASLSLNGNILIGPIPPTIGYL 306 (764)
Q Consensus 227 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l 306 (764)
| .+..+++|+.|+|++|.+++..+..|.++++|+.|+|++|+++++.+..|.++++|+.|+|++|++++..+..+..+
T Consensus 201 -~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 278 (440)
T 3zyj_A 201 -P-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPL 278 (440)
T ss_dssp -C-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSC
T ss_pred -c-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccc
Confidence 3 47889999999999999998889999999999999999999998889999999999999999999998888889999
Q ss_pred CccceEEccCCcCc
Q 004268 307 TNLTYLNLGYNRLS 320 (764)
Q Consensus 307 ~~L~~L~ls~N~l~ 320 (764)
++|+.|+|++|.+.
T Consensus 279 ~~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 279 HHLERIHLHHNPWN 292 (440)
T ss_dssp TTCCEEECCSSCEE
T ss_pred cCCCEEEcCCCCcc
Confidence 99999999999987
No 306
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.97 E-value=1.2e-29 Score=278.82 Aligned_cols=249 Identities=24% Similarity=0.228 Sum_probs=223.6
Q ss_pred CCCEEEccCCcCcccCCcccCCCCCCCEEecCCCcccccCCccCcCCCCCCEEEccCCcCcccCCccccCCCCcCEEecc
Q 004268 68 RLKVLDLSYNRLTGTIPSEIGSLRDLLDLNLSNNILNGSIPLEFGNLKDLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLS 147 (764)
Q Consensus 68 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 147 (764)
....++.+++.++ .+|..+. ++|++|+|++|.++++.+..|.++++|++|+|++|.++++.+..|.++++|++|+|+
T Consensus 55 ~~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~ 131 (452)
T 3zyi_A 55 QFSKVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELF 131 (452)
T ss_dssp SSCEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCcEEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECC
Confidence 4578899999988 5666554 689999999999998889999999999999999999999988999999999999999
Q ss_pred cCcccccCCccccCCCCCCeeecccCCCCCCCCCccccCCCccEEEecC-ccCcCCcccccCCccccceeeccCcccccc
Q 004268 148 LNQLSGRLPQEVGNLKNLKSLFLDNNHLSGPIPSTLYHLNQLATLCLGY-NKLVGPVTKEVGNMKNLDRLHLNGNNLTGS 226 (764)
Q Consensus 148 ~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~-n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~ 226 (764)
+|+++.+.+..|.++++|++|+|++|.++.+.+..|..+++|+.|++++ |.+..+....|..+++|++|+|++|++++.
T Consensus 132 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~ 211 (452)
T 3zyi_A 132 DNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM 211 (452)
T ss_dssp SSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC
T ss_pred CCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc
Confidence 9999988888899999999999999999988888899999999999998 567767777899999999999999999865
Q ss_pred cCccccCCCCCCEEEccCCcccCCCCcCCcCCCCCCeEEccCCcccCCCCccccCCCCCCeEeccCccccCCCCCCCCCC
Q 004268 227 IPSTIGYLNLLDELHLSHNRLDGPIPPTIGNLTNLIALDLSSNQLSGLLPREVGNLKYLASLSLNGNILIGPIPPTIGYL 306 (764)
Q Consensus 227 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l 306 (764)
| .+..+++|+.|+|++|.+++..+..|.++++|+.|+|++|+++++.+..|.++++|+.|+|++|++++..+..+..+
T Consensus 212 -~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 289 (452)
T 3zyi_A 212 -P-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPL 289 (452)
T ss_dssp -C-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTC
T ss_pred -c-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccc
Confidence 3 47888999999999999998888999999999999999999998888899999999999999999998888888999
Q ss_pred CccceEEccCCcCcc
Q 004268 307 TNLTYLNLGYNRLSS 321 (764)
Q Consensus 307 ~~L~~L~ls~N~l~~ 321 (764)
++|+.|+|++|.+.-
T Consensus 290 ~~L~~L~L~~Np~~C 304 (452)
T 3zyi_A 290 RYLVELHLHHNPWNC 304 (452)
T ss_dssp TTCCEEECCSSCEEC
T ss_pred cCCCEEEccCCCcCC
Confidence 999999999998873
No 307
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.97 E-value=8.1e-30 Score=262.08 Aligned_cols=223 Identities=27% Similarity=0.322 Sum_probs=106.8
Q ss_pred cEEEcCCCcCcccCCccccCCCCCCEEEccCCcCcccCCcccCCCCCCCEEecCCCcccccCCccCcCCCCCCEEEccCC
Q 004268 46 EKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLDLNLSNNILNGSIPLEFGNLKDLDQLRLQGN 125 (764)
Q Consensus 46 ~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 125 (764)
+.++++++.++. +|..+ .++|++|+|++|.|+...+..|..+++|++|+|++|.++++.+..|.++++|++|++++|
T Consensus 14 ~~~~c~~~~l~~-ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 90 (285)
T 1ozn_A 14 VTTSCPQQGLQA-VPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDN 90 (285)
T ss_dssp CEEECCSSCCSS-CCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSC
T ss_pred eEEEcCcCCccc-CCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCC
Confidence 345555555552 23222 234555555555555444444555555555555555555444445555555555555555
Q ss_pred c-CcccCCccccCCCCcCEEecccCcccccCCccccCCCCCCeeecccCCCCCCCCCccccCCCccEEEecCccCcCCcc
Q 004268 126 K-LDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNLKSLFLDNNHLSGPIPSTLYHLNQLATLCLGYNKLVGPVT 204 (764)
Q Consensus 126 ~-l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~ 204 (764)
. +..+.+..|.++++|++|+|++|.++++.+..|.++++|++|++++|.+ ..+..
T Consensus 91 ~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l------------------------~~~~~ 146 (285)
T 1ozn_A 91 AQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNAL------------------------QALPD 146 (285)
T ss_dssp TTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCC------------------------CCCCT
T ss_pred CCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcc------------------------cccCH
Confidence 4 4444444444444444444444444444444444444444444444444 33333
Q ss_pred cccCCccccceeeccCcccccccCccccCCCCCCEEEccCCcccCCCCcCCcCCCCCCeEEccCCcccCCCCccccCCCC
Q 004268 205 KEVGNMKNLDRLHLNGNNLTGSIPSTIGYLNLLDELHLSHNRLDGPIPPTIGNLTNLIALDLSSNQLSGLLPREVGNLKY 284 (764)
Q Consensus 205 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 284 (764)
..|..+++|++|++++|++++..+..+..+++|+.|++++|.+++..+..|..+++|+.|++++|.+++..+..+..+++
T Consensus 147 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~ 226 (285)
T 1ozn_A 147 DTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRA 226 (285)
T ss_dssp TTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTT
T ss_pred hHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcc
Confidence 33444444555555555544444444444455555555555554444445555555555555555555444344444444
Q ss_pred CCeEeccCccc
Q 004268 285 LASLSLNGNIL 295 (764)
Q Consensus 285 L~~L~l~~n~l 295 (764)
|+.|++++|.+
T Consensus 227 L~~L~l~~N~~ 237 (285)
T 1ozn_A 227 LQYLRLNDNPW 237 (285)
T ss_dssp CCEEECCSSCE
T ss_pred cCEEeccCCCc
Confidence 44444444444
No 308
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.97 E-value=1.1e-29 Score=261.11 Aligned_cols=237 Identities=25% Similarity=0.215 Sum_probs=114.6
Q ss_pred CCCEEEccCCcCcccCCccccCCCCcCEEecccCcccccCCccccCCCCCCeeecccCC-CCCCCCCccccCCCccEEEe
Q 004268 116 DLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNLKSLFLDNNH-LSGPIPSTLYHLNQLATLCL 194 (764)
Q Consensus 116 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~-i~~~~~~~~~~l~~L~~L~l 194 (764)
+|++|+|++|.++.+.+..|.++++|++|+|++|.++++.+..|.++++|++|++++|. ++.+.+..+..+++|++|++
T Consensus 33 ~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l 112 (285)
T 1ozn_A 33 ASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHL 112 (285)
T ss_dssp TCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEEC
T ss_pred CceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEEC
Confidence 44444444444444444444444444444444444444444444444444444444443 33333333444444444444
Q ss_pred cCccCcCCcccccCCccccceeeccCcccccccCccccCCCCCCEEEccCCcccCCCCcCCcCCCCCCeEEccCCcccCC
Q 004268 195 GYNKLVGPVTKEVGNMKNLDRLHLNGNNLTGSIPSTIGYLNLLDELHLSHNRLDGPIPPTIGNLTNLIALDLSSNQLSGL 274 (764)
Q Consensus 195 ~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 274 (764)
++|.+..+.+..+..+++|++|++++|.+++..+.. |..+++|+.|+|++|.++++
T Consensus 113 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~------------------------~~~l~~L~~L~l~~n~l~~~ 168 (285)
T 1ozn_A 113 DRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDT------------------------FRDLGNLTHLFLHGNRISSV 168 (285)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTT------------------------TTTCTTCCEEECCSSCCCEE
T ss_pred CCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhH------------------------hccCCCccEEECCCCccccc
Confidence 444444333444445555555555555555444444 44444555555555555444
Q ss_pred CCccccCCCCCCeEeccCccccCCCCCCCCCCCccceEEccCCcCccCCChhhhcccccceeeccccccccCCchhcccc
Q 004268 275 LPREVGNLKYLASLSLNGNILIGPIPPTIGYLTNLTYLNLGYNRLSSSIPPELMNCSQLLNLVLSHNSLSGSIPSEIGNL 354 (764)
Q Consensus 275 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l 354 (764)
.+..|..+++|+.|++++|.+.+..|..+..+++|++|++++|++++..+..+..+++|++|++++|++....+. ..-.
T Consensus 169 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~-~~~~ 247 (285)
T 1ozn_A 169 PERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRA-RPLW 247 (285)
T ss_dssp CTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGG-HHHH
T ss_pred CHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCc-HHHH
Confidence 444455555555555555555554455555555566666666665544444455566666666666665532221 1112
Q ss_pred cccceeecccccccCCCCCCCCC
Q 004268 355 IFFRQLDLSRNFINGTIPSQLGK 377 (764)
Q Consensus 355 ~~L~~L~l~~N~l~~~~~~~~~~ 377 (764)
..++.+..+.|.+.+..|..+.+
T Consensus 248 ~~l~~~~~~~~~~~c~~p~~l~g 270 (285)
T 1ozn_A 248 AWLQKFRGSSSEVPCSLPQRLAG 270 (285)
T ss_dssp HHHHHCCSEECCCBEEESGGGTT
T ss_pred HHHHhcccccCccccCCchHhCC
Confidence 33445555566666555555433
No 309
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.96 E-value=2.8e-28 Score=274.12 Aligned_cols=267 Identities=24% Similarity=0.218 Sum_probs=146.6
Q ss_pred CcEEEcCCCcCcccCCccccCCCCCCEEEccCCcCcccCCcccCCCCCCCEEecCCCcccccCCccCcCCCCCCEEEccC
Q 004268 45 LEKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLDLNLSNNILNGSIPLEFGNLKDLDQLRLQG 124 (764)
Q Consensus 45 L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 124 (764)
++.|++++|.++ .+|..+. ++|++|+|++|.|+. +|. .+++|++|+|++|.++.+.. .+++|++|+|++
T Consensus 42 l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~~-lp~---~l~~L~~L~Ls~N~l~~lp~----~l~~L~~L~Ls~ 110 (622)
T 3g06_A 42 NAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLTS-LPA---LPPELRTLEVSGNQLTSLPV----LPPGLLELSIFS 110 (622)
T ss_dssp CCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCSC-CCC---CCTTCCEEEECSCCCSCCCC----CCTTCCEEEECS
T ss_pred CcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCCC-CCC---cCCCCCEEEcCCCcCCcCCC----CCCCCCEEECcC
Confidence 444445444444 2333332 345555555554442 222 23445555555555443222 344555555555
Q ss_pred CcCcccCCccccCCCCcCEEecccCcccccCCccccCCCCCCeeecccCCCCCCCCCccccCCCccEEEecCccCcCCcc
Q 004268 125 NKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNLKSLFLDNNHLSGPIPSTLYHLNQLATLCLGYNKLVGPVT 204 (764)
Q Consensus 125 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~ 204 (764)
|+++++++ .+++|+.|++++|+++.+.. . +++|++|+|++|.++++.. .+.+|+.|++++|.++.+.
T Consensus 111 N~l~~l~~----~l~~L~~L~L~~N~l~~lp~-~---l~~L~~L~Ls~N~l~~l~~----~~~~L~~L~L~~N~l~~l~- 177 (622)
T 3g06_A 111 NPLTHLPA----LPSGLCKLWIFGNQLTSLPV-L---PPGLQELSVSDNQLASLPA----LPSELCKLWAYNNQLTSLP- 177 (622)
T ss_dssp CCCCCCCC----CCTTCCEEECCSSCCSCCCC-C---CTTCCEEECCSSCCSCCCC----CCTTCCEEECCSSCCSCCC-
T ss_pred CcCCCCCC----CCCCcCEEECCCCCCCcCCC-C---CCCCCEEECcCCcCCCcCC----ccCCCCEEECCCCCCCCCc-
Confidence 55544322 33445555555555543221 1 2455555555555543221 2344555555555555433
Q ss_pred cccCCccccceeeccCcccccccCccccCCCCCCEEEccCCcccCCCCcCCcCCCCCCeEEccCCcccCCCCccccCCCC
Q 004268 205 KEVGNMKNLDRLHLNGNNLTGSIPSTIGYLNLLDELHLSHNRLDGPIPPTIGNLTNLIALDLSSNQLSGLLPREVGNLKY 284 (764)
Q Consensus 205 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 284 (764)
..+++|+.|++++|.++++.. .+++|+.|++++|.++.+ |. .+++|+.|+|++|.++++. ..+++
T Consensus 178 ---~~~~~L~~L~Ls~N~l~~l~~----~~~~L~~L~L~~N~l~~l-~~---~~~~L~~L~Ls~N~L~~lp----~~l~~ 242 (622)
T 3g06_A 178 ---MLPSGLQELSVSDNQLASLPT----LPSELYKLWAYNNRLTSL-PA---LPSGLKELIVSGNRLTSLP----VLPSE 242 (622)
T ss_dssp ---CCCTTCCEEECCSSCCSCCCC----CCTTCCEEECCSSCCSSC-CC---CCTTCCEEECCSSCCSCCC----CCCTT
T ss_pred ---ccCCCCcEEECCCCCCCCCCC----ccchhhEEECcCCccccc-CC---CCCCCCEEEccCCccCcCC----CCCCc
Confidence 234566666666666664221 235667777777777633 32 2367777777777777532 34567
Q ss_pred CCeEeccCccccCCCCCCCCCCCccceEEccCCcCccCCChhhhcccccceeeccccccccCCchhccccc
Q 004268 285 LASLSLNGNILIGPIPPTIGYLTNLTYLNLGYNRLSSSIPPELMNCSQLLNLVLSHNSLSGSIPSEIGNLI 355 (764)
Q Consensus 285 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~ 355 (764)
|+.|++++|+|+.+ |. .+++|+.|+|++|+|+ .+|..+.++++|+.|+|++|++++..|..+..+.
T Consensus 243 L~~L~Ls~N~L~~l-p~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 243 LKELMVSGNRLTSL-PM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREIT 308 (622)
T ss_dssp CCEEECCSSCCSCC-CC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHHHHHH
T ss_pred CcEEECCCCCCCcC-Cc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHHHhcc
Confidence 77777777777643 33 4567778888888777 5577777777888888888887776666665554
No 310
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.96 E-value=2.4e-28 Score=274.70 Aligned_cols=268 Identities=26% Similarity=0.255 Sum_probs=159.7
Q ss_pred CCCEEEccCCcCcccCCcccCCCCCCCEEecCCCcccccCCccCcCCCCCCEEEccCCcCcccCCccccCCCCcCEEecc
Q 004268 68 RLKVLDLSYNRLTGTIPSEIGSLRDLLDLNLSNNILNGSIPLEFGNLKDLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLS 147 (764)
Q Consensus 68 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 147 (764)
++++|++++|.++ .+|..+. ++|++|+|++|.++.+.+ .+++|++|+|++|+++++++ .+++|++|+|+
T Consensus 41 ~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~~lp~----~l~~L~~L~Ls~N~l~~lp~----~l~~L~~L~Ls 109 (622)
T 3g06_A 41 GNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLTSLPA----LPPELRTLEVSGNQLTSLPV----LPPGLLELSIF 109 (622)
T ss_dssp CCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCSCCCC----CCTTCCEEEECSCCCSCCCC----CCTTCCEEEEC
T ss_pred CCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCCCCCC----cCCCCCEEEcCCCcCCcCCC----CCCCCCEEECc
Confidence 5778888888887 5565554 678888888887774433 45777777777777776543 56777777777
Q ss_pred cCcccccCCccccCCCCCCeeecccCCCCCCCCCccccCCCccEEEecCccCcCCcccccCCccccceeeccCccccccc
Q 004268 148 LNQLSGRLPQEVGNLKNLKSLFLDNNHLSGPIPSTLYHLNQLATLCLGYNKLVGPVTKEVGNMKNLDRLHLNGNNLTGSI 227 (764)
Q Consensus 148 ~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 227 (764)
+|+++++.. .+++|+.|++++|.++.+.. .+++|++|++++|++..++. .+++
T Consensus 110 ~N~l~~l~~----~l~~L~~L~L~~N~l~~lp~----~l~~L~~L~Ls~N~l~~l~~----~~~~--------------- 162 (622)
T 3g06_A 110 SNPLTHLPA----LPSGLCKLWIFGNQLTSLPV----LPPGLQELSVSDNQLASLPA----LPSE--------------- 162 (622)
T ss_dssp SCCCCCCCC----CCTTCCEEECCSSCCSCCCC----CCTTCCEEECCSSCCSCCCC----CCTT---------------
T ss_pred CCcCCCCCC----CCCCcCEEECCCCCCCcCCC----CCCCCCEEECcCCcCCCcCC----ccCC---------------
Confidence 777775433 45667777777777664332 13555555555555554321 2234
Q ss_pred CccccCCCCCCEEEccCCcccCCCCcCCcCCCCCCeEEccCCcccCCCCccccCCCCCCeEeccCccccCCCCCCCCCCC
Q 004268 228 PSTIGYLNLLDELHLSHNRLDGPIPPTIGNLTNLIALDLSSNQLSGLLPREVGNLKYLASLSLNGNILIGPIPPTIGYLT 307 (764)
Q Consensus 228 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 307 (764)
|+.|++++|.++.+ | ..+++|+.|+|++|.++++.. .+++|+.|++++|.+... |. .++
T Consensus 163 ---------L~~L~L~~N~l~~l-~---~~~~~L~~L~Ls~N~l~~l~~----~~~~L~~L~L~~N~l~~l-~~---~~~ 221 (622)
T 3g06_A 163 ---------LCKLWAYNNQLTSL-P---MLPSGLQELSVSDNQLASLPT----LPSELYKLWAYNNRLTSL-PA---LPS 221 (622)
T ss_dssp ---------CCEEECCSSCCSCC-C---CCCTTCCEEECCSSCCSCCCC----CCTTCCEEECCSSCCSSC-CC---CCT
T ss_pred ---------CCEEECCCCCCCCC-c---ccCCCCcEEECCCCCCCCCCC----ccchhhEEECcCCccccc-CC---CCC
Confidence 44455555555432 2 223455555555555553221 124555555555555532 21 135
Q ss_pred ccceEEccCCcCccCCChhhhcccccceeeccccccccCCchhcccccccceeecccccccCCCCCCCCCCCccceecCC
Q 004268 308 NLTYLNLGYNRLSSSIPPELMNCSQLLNLVLSHNSLSGSIPSEIGNLIFFRQLDLSRNFINGTIPSQLGKIPNISAVDLS 387 (764)
Q Consensus 308 ~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~ 387 (764)
+|++|+|++|+|++ +| ..+++|+.|+|++|+|+ .+|. .+++|+.|+|++|+|+ .+|..+.++++|+.|+++
T Consensus 222 ~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~ 292 (622)
T 3g06_A 222 GLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLE 292 (622)
T ss_dssp TCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECC
T ss_pred CCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEec
Confidence 66666666666663 33 33456666666666666 3333 4556677777777776 556667777777777777
Q ss_pred CCccccccCCccccCc
Q 004268 388 KNNLSGVIPASVRRIP 403 (764)
Q Consensus 388 ~N~l~~~~~~~~~~~~ 403 (764)
+|++++..|..+..++
T Consensus 293 ~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 293 GNPLSERTLQALREIT 308 (622)
T ss_dssp SCCCCHHHHHHHHHHH
T ss_pred CCCCCCcCHHHHHhcc
Confidence 7777776666555444
No 311
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.96 E-value=2.9e-30 Score=269.42 Aligned_cols=255 Identities=22% Similarity=0.210 Sum_probs=133.5
Q ss_pred EEEcCCCcCcccCCccccCCCCCCEEEccCCcCcccCCcccCCCCCCCEEecCCCcccccCCccCcCCCCCCEEEccCCc
Q 004268 47 KLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLDLNLSNNILNGSIPLEFGNLKDLDQLRLQGNK 126 (764)
Q Consensus 47 ~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 126 (764)
.++++.+.+.......+..+++|++|+|++|++++..+..|..+++|++|+|++|.+++..+ |..+++|++|+|++|+
T Consensus 14 i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~ 91 (317)
T 3o53_A 14 IEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNY 91 (317)
T ss_dssp EESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSE
T ss_pred EeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCc
Confidence 44555555544444444445555555555555554444555555555555555555553332 4555555555555555
Q ss_pred CcccCCccccCCCCcCEEecccCcccccCCccccCCCCCCeeecccCCCCCCCCCccccCCCccEEEecCccCcCCcccc
Q 004268 127 LDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNLKSLFLDNNHLSGPIPSTLYHLNQLATLCLGYNKLVGPVTKE 206 (764)
Q Consensus 127 l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~ 206 (764)
++++. ..++|++|++++|+++++.+. .+++|++|++++|++..+.+..
T Consensus 92 l~~l~-----~~~~L~~L~l~~n~l~~~~~~---------------------------~~~~L~~L~l~~N~l~~~~~~~ 139 (317)
T 3o53_A 92 VQELL-----VGPSIETLHAANNNISRVSCS---------------------------RGQGKKNIYLANNKITMLRDLD 139 (317)
T ss_dssp EEEEE-----ECTTCCEEECCSSCCSEEEEC---------------------------CCSSCEEEECCSSCCCSGGGBC
T ss_pred ccccc-----CCCCcCEEECCCCccCCcCcc---------------------------ccCCCCEEECCCCCCCCccchh
Confidence 54332 124445555555444433222 1234444555555544444444
Q ss_pred cCCccccceeeccCcccccccCccc-cCCCCCCEEEccCCcccCCCCcCCcCCCCCCeEEccCCcccCCCCccccCCCCC
Q 004268 207 VGNMKNLDRLHLNGNNLTGSIPSTI-GYLNLLDELHLSHNRLDGPIPPTIGNLTNLIALDLSSNQLSGLLPREVGNLKYL 285 (764)
Q Consensus 207 ~~~l~~L~~L~L~~n~l~~~~~~~~-~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 285 (764)
+..+++|++|++++|.+++..+..+ ..+++|++|+|++|.+++.. ....+++|+.|+|++|+++++.+ .+..+++|
T Consensus 140 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~--~~~~l~~L~~L~Ls~N~l~~l~~-~~~~l~~L 216 (317)
T 3o53_A 140 EGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVK--GQVVFAKLKTLDLSSNKLAFMGP-EFQSAAGV 216 (317)
T ss_dssp TGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEE--CCCCCTTCCEEECCSSCCCEECG-GGGGGTTC
T ss_pred hhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCcccc--cccccccCCEEECCCCcCCcchh-hhcccCcc
Confidence 5555555555555555555444444 24566666666666665442 22235666666766666664333 35566666
Q ss_pred CeEeccCccccCCCCCCCCCCCccceEEccCCcCc-cCCChhhhcccccceeecc
Q 004268 286 ASLSLNGNILIGPIPPTIGYLTNLTYLNLGYNRLS-SSIPPELMNCSQLLNLVLS 339 (764)
Q Consensus 286 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~-~~~~~~~~~l~~L~~L~ls 339 (764)
+.|++++|++.+ +|..+..+++|+.|++++|.++ +..+..+..+++|+.|+++
T Consensus 217 ~~L~L~~N~l~~-l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~ 270 (317)
T 3o53_A 217 TWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (317)
T ss_dssp SEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHH
T ss_pred cEEECcCCcccc-hhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECC
Confidence 666666666653 3444555566666666666665 3444455555555555555
No 312
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.96 E-value=2.9e-30 Score=269.41 Aligned_cols=268 Identities=21% Similarity=0.182 Sum_probs=215.4
Q ss_pred CCeeEEEeCCCCccccCCccccCCCCCcEEEcCCCcCcccCCccccCCCCCCEEEccCCcCcccCCcccCCCCCCCEEec
Q 004268 19 PNLVTFRIWGTLLSGRMPSEIGALSKLEKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLDLNL 98 (764)
Q Consensus 19 ~~l~~L~l~~~~~~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L 98 (764)
..+..++++.+.+...+...+..+++|++|+|++|++++..|..|..+++|++|+|++|++++..+ |..+++|++|+|
T Consensus 10 ~~l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~L 87 (317)
T 3o53_A 10 NRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDL 87 (317)
T ss_dssp TEEEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEEC
T ss_pred CceeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEEC
Confidence 457777888888876666677788899999999999998888899999999999999999986543 899999999999
Q ss_pred CCCcccccCCccCcCCCCCCEEEccCCcCcccCCccccCCCCcCEEecccCcccccCCccccCCCCCCeeecccCCCCCC
Q 004268 99 SNNILNGSIPLEFGNLKDLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNLKSLFLDNNHLSGP 178 (764)
Q Consensus 99 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~ 178 (764)
++|.++++. ..++|++|++++|+++++.+.. +++|++|++++|+++++.+..|..+++|++|++++|.++++
T Consensus 88 s~n~l~~l~-----~~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 159 (317)
T 3o53_A 88 NNNYVQELL-----VGPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTV 159 (317)
T ss_dssp CSSEEEEEE-----ECTTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEE
T ss_pred cCCcccccc-----CCCCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcc
Confidence 999998554 3489999999999999876544 57899999999999988888899999999999999999876
Q ss_pred CCCcc-ccCCCccEEEecCccCcCCcccccCCccccceeeccCcccccccCccccCCCCCCEEEccCCcccCCCCcCCcC
Q 004268 179 IPSTL-YHLNQLATLCLGYNKLVGPVTKEVGNMKNLDRLHLNGNNLTGSIPSTIGYLNLLDELHLSHNRLDGPIPPTIGN 257 (764)
Q Consensus 179 ~~~~~-~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 257 (764)
.+..+ ..+++|++|++++|.++.+. ....+++|++|++++|+++++.+ .+..+++|+.|+|++|.++. +|..+..
T Consensus 160 ~~~~~~~~l~~L~~L~L~~N~l~~~~--~~~~l~~L~~L~Ls~N~l~~l~~-~~~~l~~L~~L~L~~N~l~~-l~~~~~~ 235 (317)
T 3o53_A 160 NFAELAASSDTLEHLNLQYNFIYDVK--GQVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVL-IEKALRF 235 (317)
T ss_dssp EGGGGGGGTTTCCEEECTTSCCCEEE--CCCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCE-ECTTCCC
T ss_pred cHHHHhhccCcCCEEECCCCcCcccc--cccccccCCEEECCCCcCCcchh-hhcccCcccEEECcCCcccc-hhhHhhc
Confidence 66665 46888899999998888653 23347888888888888886544 47778888888888888884 4566778
Q ss_pred CCCCCeEEccCCccc-CCCCccccCCCCCCeEeccCc-cccCCCC
Q 004268 258 LTNLIALDLSSNQLS-GLLPREVGNLKYLASLSLNGN-ILIGPIP 300 (764)
Q Consensus 258 l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~l~~n-~l~~~~~ 300 (764)
+++|+.|++++|++. +..+..+..+++|+.|++++| .+.+..+
T Consensus 236 l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~~ 280 (317)
T 3o53_A 236 SQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNE 280 (317)
T ss_dssp CTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSSSS
T ss_pred CCCCCEEEccCCCccCcCHHHHHhccccceEEECCCchhccCCch
Confidence 888888888888887 556667777777888877744 3444333
No 313
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.96 E-value=4.3e-30 Score=287.21 Aligned_cols=187 Identities=18% Similarity=0.093 Sum_probs=133.4
Q ss_pred eeecCceeEEEEE-ECCCCEEEEEEccCCCCC-------cHHHHHHHHHHHHHHHhc-CCCceeeEeeEEeeCCEEEEEE
Q 004268 516 IGTGGYGSVYRAQ-LSSGKLVALKKLHRSETE-------EPAFLESFQTEARLLSQI-RHRNIVKLYGFCLHNKCMFLIY 586 (764)
Q Consensus 516 ig~G~~g~V~~~~-~~~~~~vavK~~~~~~~~-------~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lv~ 586 (764)
.+.|+.|.+..++ ...|+.|++|++...... .+...+++.+|+++++++ .|+||+++++++++++..||||
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM 321 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM 321 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence 3455666555553 336889999999765322 233456799999999999 7999999999999999999999
Q ss_pred EecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeeccccccCCC
Q 004268 587 EYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLARLLHPD 666 (764)
Q Consensus 587 e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 666 (764)
||++|++|.+++.+. .+++.. +|+.||+.||+|+| ++|||||||||+|||++++|.+||+|||+|+.....
T Consensus 322 Eyv~G~~L~d~i~~~---~~l~~~---~I~~QIl~AL~ylH---~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~ 392 (569)
T 4azs_A 322 EKLPGRLLSDMLAAG---EEIDRE---KILGSLLRSLAALE---KQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQD 392 (569)
T ss_dssp ECCCSEEHHHHHHTT---CCCCHH---HHHHHHHHHHHHHH---HTTCEESCCCGGGEEECTTSCEEECCCTTEESCC--
T ss_pred ecCCCCcHHHHHHhC---CCCCHH---HHHHHHHHHHHHHH---HCCceeccCchHhEEECCCCCEEEeecccCeeCCCC
Confidence 999999999999843 345544 58999999999999 999999999999999999999999999999887665
Q ss_pred CCCceecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCC
Q 004268 667 SSNRTLVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHP 712 (764)
Q Consensus 667 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~P 712 (764)
.......+||+.|+|||++.+. +..++|+||+|++++++.+|..|
T Consensus 393 ~~~~~t~vGTp~YmAPE~l~g~-~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 393 CSWPTNLVQSFFVFVNELFAEN-KSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp -CCSHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred CccccCceechhhccHHHhCCC-CCCcccccccccchhhhccccch
Confidence 5556667899999999998764 66789999999998877655443
No 314
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.95 E-value=2e-31 Score=304.28 Aligned_cols=379 Identities=14% Similarity=0.096 Sum_probs=208.2
Q ss_pred cccccCCCeeEEEeCCCCc---cccCCcccc------------CCCCCcEEEcCCCcCcccCCccccC-C-CCCCEEEcc
Q 004268 13 LNFTCFPNLVTFRIWGTLL---SGRMPSEIG------------ALSKLEKLVLSHNSLTGRIPSEIGA-L-SRLKVLDLS 75 (764)
Q Consensus 13 ~~~~~~~~l~~L~l~~~~~---~~~~~~~~~------------~l~~L~~L~Ls~n~i~~~~~~~~~~-l-~~L~~L~L~ 75 (764)
..+..+|+|+.|++.+|.. .+.+|..++ .+++|++|+|++|.+++..+..+.. + .+|++|+|+
T Consensus 67 ~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~ 146 (592)
T 3ogk_B 67 RLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLD 146 (592)
T ss_dssp HHHHHCTTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEEEEE
T ss_pred HHHHhCCCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCCCeEEeeccEecHHHHHHHHHhccccCcEEECc
Confidence 3455666666666655432 122222222 4566666666666555443333333 2 236666665
Q ss_pred CCc-Ccc-cCCcccCCCCCCCEEecCCCcccccC----CccCcCCCCCCEEEccCCcCcccC----CccccCCCCcCEEe
Q 004268 76 YNR-LTG-TIPSEIGSLRDLLDLNLSNNILNGSI----PLEFGNLKDLDQLRLQGNKLDGLI----PSSIGNLTNLTYLD 145 (764)
Q Consensus 76 ~n~-i~~-~~~~~~~~l~~L~~L~L~~n~l~~~~----~~~~~~l~~L~~L~L~~n~l~~~~----~~~~~~l~~L~~L~ 145 (764)
+|. ++. ..+.....+++|++|+|++|.+++.. +..+..+++|++|++++|.++++. +..+.++++|++|+
T Consensus 147 ~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~ 226 (592)
T 3ogk_B 147 KCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVK 226 (592)
T ss_dssp SCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEE
T ss_pred CCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEe
Confidence 554 110 01122234556666666666554331 112334555666666655554221 22234455566666
Q ss_pred cccCcccccCCccccCCCC---------------------------CCeeecccCCCCCCCCCccccCCCccEEEecCcc
Q 004268 146 LSLNQLSGRLPQEVGNLKN---------------------------LKSLFLDNNHLSGPIPSTLYHLNQLATLCLGYNK 198 (764)
Q Consensus 146 L~~n~l~~~~~~~~~~l~~---------------------------L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~ 198 (764)
|++|.+.+ .+..+.++++ |+.|.++++... ..+..+..+++|++|++++|.
T Consensus 227 L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~-~l~~~~~~~~~L~~L~Ls~~~ 304 (592)
T 3ogk_B 227 VGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPN-EMPILFPFAAQIRKLDLLYAL 304 (592)
T ss_dssp CSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCTT-TGGGGGGGGGGCCEEEETTCC
T ss_pred ccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccccCccccchh-HHHHHHhhcCCCcEEecCCCc
Confidence 66555543 2234444444 444444443222 233445566677777777777
Q ss_pred CcCCcc-cccCCccccceeeccCccccc-ccCccccCCCCCCEEEcc-----------CCcccCCCC-cCCcCCCCCCeE
Q 004268 199 LVGPVT-KEVGNMKNLDRLHLNGNNLTG-SIPSTIGYLNLLDELHLS-----------HNRLDGPIP-PTIGNLTNLIAL 264 (764)
Q Consensus 199 i~~~~~-~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~-----------~n~l~~~~~-~~~~~l~~L~~L 264 (764)
+..... ..+..+++|++|+++ +.+.+ ..+..+..+++|++|+++ .|.+++... ..+..+++|++|
T Consensus 305 l~~~~~~~~~~~~~~L~~L~L~-~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L 383 (592)
T 3ogk_B 305 LETEDHCTLIQKCPNLEVLETR-NVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYM 383 (592)
T ss_dssp CCHHHHHHHHTTCTTCCEEEEE-GGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEE
T ss_pred CCHHHHHHHHHhCcCCCEEecc-CccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEE
Confidence 543222 234667777777777 33332 223333556777777777 345543211 123346778888
Q ss_pred EccCCcccCCCCccccC-CCCCCeEecc----CccccCCC-----CCCCCCCCccceEEccCCc--CccCCChhhh-ccc
Q 004268 265 DLSSNQLSGLLPREVGN-LKYLASLSLN----GNILIGPI-----PPTIGYLTNLTYLNLGYNR--LSSSIPPELM-NCS 331 (764)
Q Consensus 265 ~L~~n~l~~~~~~~~~~-l~~L~~L~l~----~n~l~~~~-----~~~~~~l~~L~~L~ls~N~--l~~~~~~~~~-~l~ 331 (764)
+++.|.+++..+..+.. +++|+.|+++ .|.+++.. +..+..+++|++|++++|. +++..+..+. .++
T Consensus 384 ~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~ 463 (592)
T 3ogk_B 384 AVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSP 463 (592)
T ss_dssp EEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCT
T ss_pred EeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCc
Confidence 88777776555555544 7778888885 55565421 1124557788888887543 5544334443 367
Q ss_pred ccceeeccccccccC-CchhcccccccceeecccccccCC-CCCCCCCCCccceecCCCCccccc
Q 004268 332 QLLNLVLSHNSLSGS-IPSEIGNLIFFRQLDLSRNFINGT-IPSQLGKIPNISAVDLSKNNLSGV 394 (764)
Q Consensus 332 ~L~~L~ls~N~l~~~-~~~~~~~l~~L~~L~l~~N~l~~~-~~~~~~~l~~L~~l~l~~N~l~~~ 394 (764)
+|++|+|++|++++. .+..+.++++|+.|+|++|++++. .+..+..+++|+.|++++|+++..
T Consensus 464 ~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~~ 528 (592)
T 3ogk_B 464 NVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMT 528 (592)
T ss_dssp TCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCTT
T ss_pred cceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCHH
Confidence 788888888887753 344456778888888888887543 233345677888888888887754
No 315
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.95 E-value=1.9e-27 Score=248.74 Aligned_cols=234 Identities=22% Similarity=0.287 Sum_probs=126.4
Q ss_pred CCCCEEEccCCcCcccCCcccCCCCCCCEEecCCCcccccCCccCcCCCCCCEEEccCCcCcccCCccccCCCCcCEEec
Q 004268 67 SRLKVLDLSYNRLTGTIPSEIGSLRDLLDLNLSNNILNGSIPLEFGNLKDLDQLRLQGNKLDGLIPSSIGNLTNLTYLDL 146 (764)
Q Consensus 67 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 146 (764)
++++.|+|++|.++ .+|..+..+++|++|+|++|.++ ..|..|.++++|++|+|++|.++. .|..|.++++|++|+|
T Consensus 81 ~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~~-lp~~l~~l~~L~~L~L 157 (328)
T 4fcg_A 81 PGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLRA-LPASIASLNRLRELSI 157 (328)
T ss_dssp TTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCCC-CCGGGGGCTTCCEEEE
T ss_pred cceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCcccc-CcHHHhcCcCCCEEEC
Confidence 45555666666555 44445555556666666666555 445555555666666666666552 3445556666666666
Q ss_pred ccCcccccCCccccCCCCCCeeecccCCCCCCCCCccccCCCccEEEecCccCcCCcccccCCccccceeeccCcccccc
Q 004268 147 SLNQLSGRLPQEVGNLKNLKSLFLDNNHLSGPIPSTLYHLNQLATLCLGYNKLVGPVTKEVGNMKNLDRLHLNGNNLTGS 226 (764)
Q Consensus 147 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~ 226 (764)
++|++.+..|..+.. . ...+.+..+++|++|++++|.++.+ +..+..+++|++|++++|.+++
T Consensus 158 ~~n~~~~~~p~~~~~------~---------~~~~~~~~l~~L~~L~L~~n~l~~l-p~~l~~l~~L~~L~L~~N~l~~- 220 (328)
T 4fcg_A 158 RACPELTELPEPLAS------T---------DASGEHQGLVNLQSLRLEWTGIRSL-PASIANLQNLKSLKIRNSPLSA- 220 (328)
T ss_dssp EEETTCCCCCSCSEE------E---------C-CCCEEESTTCCEEEEEEECCCCC-CGGGGGCTTCCEEEEESSCCCC-
T ss_pred CCCCCccccChhHhh------c---------cchhhhccCCCCCEEECcCCCcCcc-hHhhcCCCCCCEEEccCCCCCc-
Confidence 665554444443332 0 0011233444444444444444422 2234445555555555555553
Q ss_pred cCccccCCCCCCEEEccCCcccCCCCcCCcCCCCCCeEEccCCcccCCCCccccCCCCCCeEeccCccccCCCCCCCCCC
Q 004268 227 IPSTIGYLNLLDELHLSHNRLDGPIPPTIGNLTNLIALDLSSNQLSGLLPREVGNLKYLASLSLNGNILIGPIPPTIGYL 306 (764)
Q Consensus 227 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l 306 (764)
.|..+..+++|++|+|++|.+.+..|..+..+++|+.|+|++|.+.+..|..+..+++|+.|+|++|.+.+.+|..+..+
T Consensus 221 l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L 300 (328)
T 4fcg_A 221 LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQL 300 (328)
T ss_dssp CCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGS
T ss_pred CchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhc
Confidence 23345555555555555555555555556666666666666665555555556666666666666666665666666666
Q ss_pred CccceEEccCCcCc
Q 004268 307 TNLTYLNLGYNRLS 320 (764)
Q Consensus 307 ~~L~~L~ls~N~l~ 320 (764)
++|+.+++..|.+.
T Consensus 301 ~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 301 PANCIILVPPHLQA 314 (328)
T ss_dssp CTTCEEECCGGGSC
T ss_pred cCceEEeCCHHHHH
Confidence 66666666655544
No 316
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.95 E-value=2.6e-27 Score=247.69 Aligned_cols=235 Identities=23% Similarity=0.278 Sum_probs=152.2
Q ss_pred CCCCCEEEccCCcCcccCCccccCCCCcCEEecccCcccccCCccccCCCCCCeeecccCCCCCCCCCccccCCCccEEE
Q 004268 114 LKDLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNLKSLFLDNNHLSGPIPSTLYHLNQLATLC 193 (764)
Q Consensus 114 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~ 193 (764)
.++++.|+|++|.++.+ |..+..+++|++|+|++|.++ ..|..+.++++|++|+|++|.++ ..+..+..+++|++|+
T Consensus 80 ~~~l~~L~L~~n~l~~l-p~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~ 156 (328)
T 4fcg_A 80 QPGRVALELRSVPLPQF-PDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELS 156 (328)
T ss_dssp STTCCEEEEESSCCSSC-CSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEE
T ss_pred ccceeEEEccCCCchhc-ChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEE
Confidence 35677777777777643 444556777777777777776 45566667777777777777766 3455566666666666
Q ss_pred ecCccCcCCcccccCCccccceeeccCcccccccCccccCCCCCCEEEccCCcccCCCCcCCcCCCCCCeEEccCCcccC
Q 004268 194 LGYNKLVGPVTKEVGNMKNLDRLHLNGNNLTGSIPSTIGYLNLLDELHLSHNRLDGPIPPTIGNLTNLIALDLSSNQLSG 273 (764)
Q Consensus 194 l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 273 (764)
+++|.+....+..+.. . ..+..+..+++|+.|+|++|.++ .+|..+..+++|+.|+|++|.+++
T Consensus 157 L~~n~~~~~~p~~~~~------~---------~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~ 220 (328)
T 4fcg_A 157 IRACPELTELPEPLAS------T---------DASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA 220 (328)
T ss_dssp EEEETTCCCCCSCSEE------E---------C-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC
T ss_pred CCCCCCccccChhHhh------c---------cchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc
Confidence 6665544333322211 0 01122445667777777777776 556667777777777777777764
Q ss_pred CCCccccCCCCCCeEeccCccccCCCCCCCCCCCccceEEccCCcCccCCChhhhcccccceeeccccccccCCchhccc
Q 004268 274 LLPREVGNLKYLASLSLNGNILIGPIPPTIGYLTNLTYLNLGYNRLSSSIPPELMNCSQLLNLVLSHNSLSGSIPSEIGN 353 (764)
Q Consensus 274 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~ 353 (764)
.+..+..+++|+.|++++|.+.+..|..+..+++|++|+|++|.+.+.+|..+.++++|++|+|++|++.+.+|..+.+
T Consensus 221 -l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~ 299 (328)
T 4fcg_A 221 -LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQ 299 (328)
T ss_dssp -CCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGG
T ss_pred -CchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhh
Confidence 3445667777777777777776666777777777777777777766666767777777777777777776677777777
Q ss_pred ccccceeeccccccc
Q 004268 354 LIFFRQLDLSRNFIN 368 (764)
Q Consensus 354 l~~L~~L~l~~N~l~ 368 (764)
+++|+.+++..|.+.
T Consensus 300 L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 300 LPANCIILVPPHLQA 314 (328)
T ss_dssp SCTTCEEECCGGGSC
T ss_pred ccCceEEeCCHHHHH
Confidence 777777777666554
No 317
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.95 E-value=1.3e-30 Score=297.51 Aligned_cols=389 Identities=15% Similarity=0.101 Sum_probs=260.2
Q ss_pred EEEeCCCCccccCCccccCCCCCcEEEcCCCcCc---ccCCcccc------------CCCCCCEEEccCCcCcccCCccc
Q 004268 23 TFRIWGTLLSGRMPSEIGALSKLEKLVLSHNSLT---GRIPSEIG------------ALSRLKVLDLSYNRLTGTIPSEI 87 (764)
Q Consensus 23 ~L~l~~~~~~~~~~~~~~~l~~L~~L~Ls~n~i~---~~~~~~~~------------~l~~L~~L~L~~n~i~~~~~~~~ 87 (764)
.+.+.++ ....++..+..+++|++|+|+++... +..|..+. .+++|++|+|++|.++...+..+
T Consensus 54 ~l~~~~~-~~~~~~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~i~~~~~~~l 132 (592)
T 3ogk_B 54 HVTMALC-YTATPDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFRRMIVSDLDLDRL 132 (592)
T ss_dssp EEEESCG-GGSCHHHHHHHCTTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHH
T ss_pred EEEEeec-cccChHHHHHhCCCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCCCeEEeeccEecHHHHHHH
Confidence 3444443 23344556778999999999886431 23333333 68999999999999886655555
Q ss_pred CC-CC-CCCEEecCCCc-cccc-CCccCcCCCCCCEEEccCCcCcccC----CccccCCCCcCEEecccCccccc----C
Q 004268 88 GS-LR-DLLDLNLSNNI-LNGS-IPLEFGNLKDLDQLRLQGNKLDGLI----PSSIGNLTNLTYLDLSLNQLSGR----L 155 (764)
Q Consensus 88 ~~-l~-~L~~L~L~~n~-l~~~-~~~~~~~l~~L~~L~L~~n~l~~~~----~~~~~~l~~L~~L~L~~n~l~~~----~ 155 (764)
.. ++ +|++|+|++|. ++.. .+....++++|++|+|++|.+.+.. +..+.++++|++|++++|.++++ .
T Consensus 133 ~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l 212 (592)
T 3ogk_B 133 AKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDL 212 (592)
T ss_dssp HHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHH
T ss_pred HHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHH
Confidence 55 33 49999999987 2211 1222347899999999999987652 23456789999999999999733 3
Q ss_pred CccccCCCCCCeeecccCCCCCCCCCccccCCCccEEEecCccCc--------------------------CCcccccCC
Q 004268 156 PQEVGNLKNLKSLFLDNNHLSGPIPSTLYHLNQLATLCLGYNKLV--------------------------GPVTKEVGN 209 (764)
Q Consensus 156 ~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~--------------------------~~~~~~~~~ 209 (764)
+..+.++++|++|++++|.+.+ .+..+..+++|++|+++.+... ...+..+..
T Consensus 213 ~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~l~~~~~~ 291 (592)
T 3ogk_B 213 ETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPNEMPILFPF 291 (592)
T ss_dssp HHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCTTTGGGGGGG
T ss_pred HHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccccCccccchhHHHHHHhh
Confidence 4445688999999999998875 3356667777777777632211 112334455
Q ss_pred ccccceeeccCcccccccC-ccccCCCCCCEEEccCCcccCC-CCcCCcCCCCCCeEEccC-----------CcccCCCC
Q 004268 210 MKNLDRLHLNGNNLTGSIP-STIGYLNLLDELHLSHNRLDGP-IPPTIGNLTNLIALDLSS-----------NQLSGLLP 276 (764)
Q Consensus 210 l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~-~~~~~~~l~~L~~L~L~~-----------n~l~~~~~ 276 (764)
+++|++|++++|.+++... ..+..+++|+.|+++ +.+.+. .+..+..+++|+.|+|++ |.+++...
T Consensus 292 ~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~-~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~ 370 (592)
T 3ogk_B 292 AAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETR-NVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGL 370 (592)
T ss_dssp GGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEE-GGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHH
T ss_pred cCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEecc-CccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHH
Confidence 6677777777777653322 234667777777777 333322 222334567788888883 45543222
Q ss_pred -ccccCCCCCCeEeccCccccCCCCCCCCC-CCccceEEcc----CCcCccC-----CChhhhcccccceeecccc--cc
Q 004268 277 -REVGNLKYLASLSLNGNILIGPIPPTIGY-LTNLTYLNLG----YNRLSSS-----IPPELMNCSQLLNLVLSHN--SL 343 (764)
Q Consensus 277 -~~~~~l~~L~~L~l~~n~l~~~~~~~~~~-l~~L~~L~ls----~N~l~~~-----~~~~~~~l~~L~~L~ls~N--~l 343 (764)
.....+++|+.|+++.|.+++..+..+.. +++|+.|+++ .|.+++. ++..+.++++|++|++++| .+
T Consensus 371 ~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l 450 (592)
T 3ogk_B 371 IALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGL 450 (592)
T ss_dssp HHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGC
T ss_pred HHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCc
Confidence 22345788888888777776544444444 7788888886 6677743 2233667888999998743 36
Q ss_pred ccCCchhccc-ccccceeecccccccC-CCCCCCCCCCccceecCCCCcccccc-CC---ccccCccccccCCCCCC
Q 004268 344 SGSIPSEIGN-LIFFRQLDLSRNFING-TIPSQLGKIPNISAVDLSKNNLSGVI-PA---SVRRIPKLIVSENNLEL 414 (764)
Q Consensus 344 ~~~~~~~~~~-l~~L~~L~l~~N~l~~-~~~~~~~~l~~L~~l~l~~N~l~~~~-~~---~~~~~~~~~~~~n~~~~ 414 (764)
++..+..+.. +++|+.|+|++|++++ ..+..+..+++|+.|++++|+++... +. .++.++.+++++|++..
T Consensus 451 ~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~ 527 (592)
T 3ogk_B 451 TDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASM 527 (592)
T ss_dssp CHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCT
T ss_pred cHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCH
Confidence 6555555543 7889999999999875 33445577899999999999987432 22 35688999999998643
No 318
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=3.3e-29 Score=260.74 Aligned_cols=58 Identities=33% Similarity=0.359 Sum_probs=26.1
Q ss_pred CCccceEEccCCcCccCCChhhhcccccceeeccccccccCCchhcccccccceeeccccccc
Q 004268 306 LTNLTYLNLGYNRLSSSIPPELMNCSQLLNLVLSHNSLSGSIPSEIGNLIFFRQLDLSRNFIN 368 (764)
Q Consensus 306 l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 368 (764)
+++|++|+|++|+|+ .+|..+. ++|++|+|++|+|++. |. +..+++|+.|+|++|+++
T Consensus 252 l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~ 309 (312)
T 1wwl_A 252 PSQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFL 309 (312)
T ss_dssp CTTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTT
T ss_pred cCCCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCC
Confidence 344444444444444 3333332 4444444444444433 32 444445555555555444
No 319
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=3e-29 Score=261.04 Aligned_cols=154 Identities=25% Similarity=0.232 Sum_probs=76.0
Q ss_pred CCCCEEEccCCcccCCCCcCCcCCCCCCeEEccCCcccCC--CCcc--ccCCCCCCeEeccCccccCC---CCCCCCCCC
Q 004268 235 NLLDELHLSHNRLDGPIPPTIGNLTNLIALDLSSNQLSGL--LPRE--VGNLKYLASLSLNGNILIGP---IPPTIGYLT 307 (764)
Q Consensus 235 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~--~~~~--~~~l~~L~~L~l~~n~l~~~---~~~~~~~l~ 307 (764)
++|++|+|++|.+.+..+..|+.+++|+.|+|++|++.+. .+.. +..+++|++|++++|++.+. ....+..++
T Consensus 149 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~ 228 (312)
T 1wwl_A 149 PGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARV 228 (312)
T ss_dssp TTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTC
T ss_pred CCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCC
Confidence 3444444444444433334444444444444444443321 1111 14444444444444444311 111223445
Q ss_pred ccceEEccCCcCccCCC-hhhhcccccceeeccccccccCCchhcccccccceeecccccccCCCCCCCCCCCccceecC
Q 004268 308 NLTYLNLGYNRLSSSIP-PELMNCSQLLNLVLSHNSLSGSIPSEIGNLIFFRQLDLSRNFINGTIPSQLGKIPNISAVDL 386 (764)
Q Consensus 308 ~L~~L~ls~N~l~~~~~-~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l 386 (764)
+|++|+|++|++++..| ..+..+++|++|+|++|+|+ .+|..+. ++|+.|||++|+|++. |. +..+++|+.|++
T Consensus 229 ~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L 303 (312)
T 1wwl_A 229 QLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSL 303 (312)
T ss_dssp CCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEEC
T ss_pred CCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEec
Confidence 55556666665554432 33444566666666666666 4454444 5666666666666644 43 666666666666
Q ss_pred CCCcccc
Q 004268 387 SKNNLSG 393 (764)
Q Consensus 387 ~~N~l~~ 393 (764)
++|++++
T Consensus 304 ~~N~l~~ 310 (312)
T 1wwl_A 304 KGNPFLD 310 (312)
T ss_dssp TTCTTTC
T ss_pred cCCCCCC
Confidence 6666653
No 320
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.95 E-value=6e-28 Score=266.44 Aligned_cols=234 Identities=22% Similarity=0.227 Sum_probs=119.5
Q ss_pred CCCEEecCCCcccccCCccCcCCCCCCEEEccCCcCcccCCccccCCCCcCEEecccCcccccCCccccCCCCCCeeecc
Q 004268 92 DLLDLNLSNNILNGSIPLEFGNLKDLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNLKSLFLD 171 (764)
Q Consensus 92 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 171 (764)
+|++|+|++|.++++.+..|.++++|++|+|++|.+++..+ |..+++|++|+|++|.++++.+ .++|++|+++
T Consensus 35 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L~L~ 107 (487)
T 3oja_A 35 NVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETLHAA 107 (487)
T ss_dssp GCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEEECC
T ss_pred CccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEEECc
Confidence 44444444444444434444444444444444444443322 4444444444444444443221 1445555555
Q ss_pred cCCCCCCCCCccccCCCccEEEecCccCcCCcccccCCccccceeeccCcccccccCcccc-CCCCCCEEEccCCcccCC
Q 004268 172 NNHLSGPIPSTLYHLNQLATLCLGYNKLVGPVTKEVGNMKNLDRLHLNGNNLTGSIPSTIG-YLNLLDELHLSHNRLDGP 250 (764)
Q Consensus 172 ~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~-~l~~L~~L~L~~n~l~~~ 250 (764)
+|.++++.+. .+++|+.|+|++|.+..+.+..+..+++|+.|+|++|.+++..|..+. .+++|+.|+|++|.+++.
T Consensus 108 ~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~ 184 (487)
T 3oja_A 108 NNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV 184 (487)
T ss_dssp SSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE
T ss_pred CCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc
Confidence 5544433222 234455555555555555555555566666666666666655555554 456666666666666644
Q ss_pred CCcCCcCCCCCCeEEccCCcccCCCCccccCCCCCCeEeccCccccCCCCCCCCCCCccceEEccCCcCc-cCCChhhhc
Q 004268 251 IPPTIGNLTNLIALDLSSNQLSGLLPREVGNLKYLASLSLNGNILIGPIPPTIGYLTNLTYLNLGYNRLS-SSIPPELMN 329 (764)
Q Consensus 251 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~-~~~~~~~~~ 329 (764)
.+ +..+++|+.|+|++|.++++++ .+..+++|+.|+|++|.+.+ +|..+..+++|+.|++++|.+. +..|..+..
T Consensus 185 ~~--~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~~~~~ 260 (487)
T 3oja_A 185 KG--QVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFFSK 260 (487)
T ss_dssp EC--CCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHHHHTT
T ss_pred cc--cccCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHHHHHh
Confidence 22 2346666666666666665433 35566666666666666653 3444555556666666666555 333444444
Q ss_pred ccccceeecc
Q 004268 330 CSQLLNLVLS 339 (764)
Q Consensus 330 l~~L~~L~ls 339 (764)
++.|+.|+++
T Consensus 261 l~~L~~l~~~ 270 (487)
T 3oja_A 261 NQRVQTVAKQ 270 (487)
T ss_dssp CHHHHHHHHH
T ss_pred CCCCcEEecc
Confidence 4444444443
No 321
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.95 E-value=2.7e-28 Score=269.25 Aligned_cols=246 Identities=22% Similarity=0.245 Sum_probs=151.1
Q ss_pred CCCCCCEEEccCCcCcccCCccccCCCCcCEEecccCcccccCCccccCCCCCCeeecccCCCCCCCCCccccCCCccEE
Q 004268 113 NLKDLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNLKSLFLDNNHLSGPIPSTLYHLNQLATL 192 (764)
Q Consensus 113 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L 192 (764)
.+++|++|+|++|.++++.|..|.++++|++|+|++|.+++..+ |.++++|++|+|++|.++++. ..++|+.|
T Consensus 32 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~-----~~~~L~~L 104 (487)
T 3oja_A 32 SAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELL-----VGPSIETL 104 (487)
T ss_dssp TGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEE-----ECTTCCEE
T ss_pred cCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCC-----CCCCcCEE
Confidence 44578888888888887777788888888888888888876554 777777888888777776432 22555555
Q ss_pred EecCccCcCCcccccCCccccceeeccCcccccccCccccCCCCCCEEEccCCcccCCCCcCCcCCCCCCeEEccCCccc
Q 004268 193 CLGYNKLVGPVTKEVGNMKNLDRLHLNGNNLTGSIPSTIGYLNLLDELHLSHNRLDGPIPPTIGNLTNLIALDLSSNQLS 272 (764)
Q Consensus 193 ~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 272 (764)
++++|.+..+... .+ ++|+.|+|++|.+++..|..++.+++|+.|+|++|.++
T Consensus 105 ~L~~N~l~~~~~~---~l------------------------~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 157 (487)
T 3oja_A 105 HAANNNISRVSCS---RG------------------------QGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEID 157 (487)
T ss_dssp ECCSSCCCCEEEC---CC------------------------SSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCC
T ss_pred ECcCCcCCCCCcc---cc------------------------CCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCC
Confidence 5555555543322 22 34555555555555444445555555555555555555
Q ss_pred CCCCcccc-CCCCCCeEeccCccccCCCCCCCCCCCccceEEccCCcCccCCChhhhcccccceeeccccccccCCchhc
Q 004268 273 GLLPREVG-NLKYLASLSLNGNILIGPIPPTIGYLTNLTYLNLGYNRLSSSIPPELMNCSQLLNLVLSHNSLSGSIPSEI 351 (764)
Q Consensus 273 ~~~~~~~~-~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~ 351 (764)
+..|..+. .+++|+.|+|++|.+++..+ ...+++|++|+|++|.+++. |..+..+++|+.|+|++|.+++ +|..+
T Consensus 158 ~~~~~~l~~~l~~L~~L~Ls~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~L~~L~Ls~N~l~~-lp~~l 233 (487)
T 3oja_A 158 TVNFAELAASSDTLEHLNLQYNFIYDVKG--QVVFAKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLVL-IEKAL 233 (487)
T ss_dssp EEEGGGGGGGTTTCCEEECTTSCCCEEEC--CCCCTTCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCCE-ECTTC
T ss_pred CcChHHHhhhCCcccEEecCCCccccccc--cccCCCCCEEECCCCCCCCC-CHhHcCCCCccEEEecCCcCcc-cchhh
Confidence 54444443 45556666666665554422 22456666666666666643 3346666667777777776663 45556
Q ss_pred ccccccceeeccccccc-CCCCCCCCCCCccceecCC-------CCccccccC
Q 004268 352 GNLIFFRQLDLSRNFIN-GTIPSQLGKIPNISAVDLS-------KNNLSGVIP 396 (764)
Q Consensus 352 ~~l~~L~~L~l~~N~l~-~~~~~~~~~l~~L~~l~l~-------~N~l~~~~~ 396 (764)
..+++|+.|++++|++. +..|..+..++.|+.++++ .|+..+..+
T Consensus 234 ~~l~~L~~L~l~~N~l~c~~~~~~~~~l~~L~~l~~~~~~~~~~~~~~~c~~~ 286 (487)
T 3oja_A 234 RFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEEECTVP 286 (487)
T ss_dssp CCCTTCCEEECTTCCBCHHHHHHHHTTCHHHHHHHHHHHHHHTSSSSCCCSST
T ss_pred ccCCCCCEEEcCCCCCcCcchHHHHHhCCCCcEEeccccccccCCCcccccCC
Confidence 66666777777777665 4455556666667666665 555554444
No 322
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.94 E-value=3.8e-26 Score=233.47 Aligned_cols=204 Identities=25% Similarity=0.269 Sum_probs=91.9
Q ss_pred CCCEEEccCCcCcccCCcccCCCCCCCEEecCCCcccccCCccCcCCCCCCEEEccCCcCcccCCccccCCCCcCEEecc
Q 004268 68 RLKVLDLSYNRLTGTIPSEIGSLRDLLDLNLSNNILNGSIPLEFGNLKDLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLS 147 (764)
Q Consensus 68 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 147 (764)
+|++|+|++|++++..+..|..+++|++|+|++|.++++.+..|.++++|++|+|++|.++++.+..|.++++|++|+++
T Consensus 29 ~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~ 108 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred CccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECC
Confidence 34444444444444333344444444444444444444444444444445555554444444444444444555555555
Q ss_pred cCcccccCCccccCCCCCCeeecccCCCCCCC-CCccccCCCccEEEecCccCcCCcccccCCccccc----eeeccCcc
Q 004268 148 LNQLSGRLPQEVGNLKNLKSLFLDNNHLSGPI-PSTLYHLNQLATLCLGYNKLVGPVTKEVGNMKNLD----RLHLNGNN 222 (764)
Q Consensus 148 ~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~-~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~----~L~L~~n~ 222 (764)
+|.++++.+..+.++++|++|++++|.++++. +..+..+++|++|++++|+++.+.+..+..+++|+ +|++++|.
T Consensus 109 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~ 188 (276)
T 2z62_A 109 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNP 188 (276)
T ss_dssp TSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSC
T ss_pred CCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCc
Confidence 55444444444444455555555555444321 34444444444444444444443333333333333 44444444
Q ss_pred cccccCccccCCCCCCEEEccCCcccCCCCcCCcCCCCCCeEEccCCccc
Q 004268 223 LTGSIPSTIGYLNLLDELHLSHNRLDGPIPPTIGNLTNLIALDLSSNQLS 272 (764)
Q Consensus 223 l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 272 (764)
++++.+..+... +|+.|+|++|.+++..+..|..+++|+.|+|++|++.
T Consensus 189 l~~~~~~~~~~~-~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~ 237 (276)
T 2z62_A 189 MNFIQPGAFKEI-RLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWD 237 (276)
T ss_dssp CCEECTTSSCSC-CEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBC
T ss_pred ccccCccccCCC-cccEEECCCCceeecCHhHhcccccccEEEccCCccc
Confidence 443333322221 3444444444444333333444444444444444443
No 323
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.94 E-value=2.6e-26 Score=234.68 Aligned_cols=224 Identities=25% Similarity=0.262 Sum_probs=186.2
Q ss_pred eEEEeCCCCccccCCccccCCCCCcEEEcCCCcCcccCCccccCCCCCCEEEccCCcCcccCCcccCCCCCCCEEecCCC
Q 004268 22 VTFRIWGTLLSGRMPSEIGALSKLEKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLDLNLSNN 101 (764)
Q Consensus 22 ~~L~l~~~~~~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n 101 (764)
...++.+.+++ .+|..+. +++++|++++|+++++.+..|..+++|++|+|++|++++..+..|..+++|++|+|++|
T Consensus 10 ~~~~c~~~~l~-~ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n 86 (276)
T 2z62_A 10 ITYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGN 86 (276)
T ss_dssp TEEECTTSCCS-SCCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTC
T ss_pred ceEEecCCCcc-ccCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCC
Confidence 35677777775 5666554 47889999999988877778888889999999999888777778888899999999999
Q ss_pred cccccCCccCcCCCCCCEEEccCCcCcccCCccccCCCCcCEEecccCcccccC-CccccCCCCCCeeecccCCCCCCCC
Q 004268 102 ILNGSIPLEFGNLKDLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRL-PQEVGNLKNLKSLFLDNNHLSGPIP 180 (764)
Q Consensus 102 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~-~~~~~~l~~L~~L~L~~n~i~~~~~ 180 (764)
.++++.+..|.++++|++|++++|.+.++.+..+.++++|++|+|++|.++++. |..|.++++|++|++++|+++++.+
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~ 166 (276)
T 2z62_A 87 PIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYC 166 (276)
T ss_dssp CCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECG
T ss_pred ccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCH
Confidence 988888888888999999999999988887777888899999999999888653 7788888999999999998887777
Q ss_pred CccccCCCcc----EEEecCccCcCCcccccCCccccceeeccCcccccccCccccCCCCCCEEEccCCcccC
Q 004268 181 STLYHLNQLA----TLCLGYNKLVGPVTKEVGNMKNLDRLHLNGNNLTGSIPSTIGYLNLLDELHLSHNRLDG 249 (764)
Q Consensus 181 ~~~~~l~~L~----~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 249 (764)
..+..+.+|+ .|++++|.+..+.+..+.. .+|++|++++|++++..+..|..+++|+.|+|++|.+..
T Consensus 167 ~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c 238 (276)
T 2z62_A 167 TDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKE-IRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 238 (276)
T ss_dssp GGGHHHHTCTTCCEEEECCSSCCCEECTTSSCS-CCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCC
T ss_pred HHhhhhhhccccceeeecCCCcccccCccccCC-CcccEEECCCCceeecCHhHhcccccccEEEccCCcccc
Confidence 7777777776 8899999988776666654 479999999999998777778889999999999998873
No 324
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.94 E-value=1.2e-25 Score=228.68 Aligned_cols=205 Identities=29% Similarity=0.349 Sum_probs=133.4
Q ss_pred cCCCeeEEEeCCCCccccCCccccCCCCCcEEEcCCCcCcccCCccccCCCCCCEEEccCCcCcccCCcccCCCCCCCEE
Q 004268 17 CFPNLVTFRIWGTLLSGRMPSEIGALSKLEKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLDL 96 (764)
Q Consensus 17 ~~~~l~~L~l~~~~~~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L 96 (764)
|.++.+.+++++++++ .+|..+. +++++|+|++|+++++.+..|.++++|++|+|++|.++...+..|..+++|++|
T Consensus 14 c~~~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L 90 (270)
T 2o6q_A 14 CNNNKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETL 90 (270)
T ss_dssp EETTTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEE
T ss_pred eCCCCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEE
Confidence 3345667777777776 4555443 466777777777776666667777777777777777765555556666777777
Q ss_pred ecCCCcccccCCccCcCCCCCCEEEccCCcCcccCCccccCCCCcCEEecccCcccccCCccccCCCCCCeeecccCCCC
Q 004268 97 NLSNNILNGSIPLEFGNLKDLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNLKSLFLDNNHLS 176 (764)
Q Consensus 97 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~ 176 (764)
+|++|.++.+.+..|.++++|++|+|++|+++.+.+..|.++++|++|+|++|.++.+.+..|.++++|+.|+|++|.++
T Consensus 91 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 170 (270)
T 2o6q_A 91 WVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLK 170 (270)
T ss_dssp ECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCS
T ss_pred ECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCc
Confidence 77777776666666666677777777777776666666666667777777777666665555666666666666666666
Q ss_pred CCCCCccccCCCccEEEecCccCcCCcccccCCccccceeeccCcccc
Q 004268 177 GPIPSTLYHLNQLATLCLGYNKLVGPVTKEVGNMKNLDRLHLNGNNLT 224 (764)
Q Consensus 177 ~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~ 224 (764)
.+.+..|..+++|++|++++|++..+....|..+++|+.|++++|.+.
T Consensus 171 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 218 (270)
T 2o6q_A 171 RVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWD 218 (270)
T ss_dssp CCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred EeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCee
Confidence 655555666666666666666666555555555556666666655554
No 325
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.94 E-value=2.9e-25 Score=225.82 Aligned_cols=202 Identities=30% Similarity=0.310 Sum_probs=124.0
Q ss_pred CCcEEEcCCCcCcccCCccccCCCCCCEEEccCCcCcccCCcccCCCCCCCEEecCCCcccccCCccCcCCCCCCEEEcc
Q 004268 44 KLEKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLDLNLSNNILNGSIPLEFGNLKDLDQLRLQ 123 (764)
Q Consensus 44 ~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 123 (764)
+.+.+++++++++. +|..+. ++|++|+|++|+|+...+.+|..+++|++|+|++|.++.+.+..|.++++|++|+|+
T Consensus 17 ~~~~l~~~~~~l~~-ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~ 93 (270)
T 2o6q_A 17 NKNSVDCSSKKLTA-IPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVT 93 (270)
T ss_dssp TTTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECC
T ss_pred CCCEEEccCCCCCc-cCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECC
Confidence 45667777777763 444443 466777777777765555566667777777777777666666666666666777666
Q ss_pred CCcCcccCCccccCCCCcCEEecccCcccccCCccccCCCCCCeeecccCCCCCCCCCccccCCCccEEEecCccCcCCc
Q 004268 124 GNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNLKSLFLDNNHLSGPIPSTLYHLNQLATLCLGYNKLVGPV 203 (764)
Q Consensus 124 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~ 203 (764)
+|+++.+++..|.++++|++|+|++|+++.+.+..|.++++|++|+|++|.++.+.+..|..+++|+.|++++|
T Consensus 94 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n------ 167 (270)
T 2o6q_A 94 DNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNN------ 167 (270)
T ss_dssp SSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS------
T ss_pred CCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCC------
Confidence 66666666666666666666666666666665555666666666666666665554444455555555555554
Q ss_pred ccccCCccccceeeccCcccccccCccccCCCCCCEEEccCCcccCCCCcCCcCCCCCCeEEccCCccc
Q 004268 204 TKEVGNMKNLDRLHLNGNNLTGSIPSTIGYLNLLDELHLSHNRLDGPIPPTIGNLTNLIALDLSSNQLS 272 (764)
Q Consensus 204 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 272 (764)
.++++.+..|..+++|+.|+|++|.++...+..|..+++|+.|+|++|++.
T Consensus 168 ------------------~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 218 (270)
T 2o6q_A 168 ------------------QLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWD 218 (270)
T ss_dssp ------------------CCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred ------------------cCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCee
Confidence 444444444555555555555555555555555666666666666666654
No 326
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.94 E-value=2.8e-29 Score=286.79 Aligned_cols=391 Identities=16% Similarity=0.129 Sum_probs=259.8
Q ss_pred ccccccCCCeeEEEeCCCCccc---cCCc------------cccCCCCCcEEEcCCCcCcccCCcccc-CCCCCCEEEcc
Q 004268 12 QLNFTCFPNLVTFRIWGTLLSG---RMPS------------EIGALSKLEKLVLSHNSLTGRIPSEIG-ALSRLKVLDLS 75 (764)
Q Consensus 12 ~~~~~~~~~l~~L~l~~~~~~~---~~~~------------~~~~l~~L~~L~Ls~n~i~~~~~~~~~-~l~~L~~L~L~ 75 (764)
...+..+|+|+.|++.+|.... ..|. -...+++|++|+|++|.+++..+..+. .+++|++|+|+
T Consensus 59 ~~~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~ 138 (594)
T 2p1m_B 59 ATVIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLS 138 (594)
T ss_dssp HHHHHHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEE
T ss_pred HHHHhhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCC
Confidence 3456778899999999886322 1111 134678899999999988866666664 67899999999
Q ss_pred CC-cCccc-CCcccCCCCCCCEEecCCCcccccCCccC----cCCCCCCEEEccCCcCcccCCcc----ccCCCCcCEEe
Q 004268 76 YN-RLTGT-IPSEIGSLRDLLDLNLSNNILNGSIPLEF----GNLKDLDQLRLQGNKLDGLIPSS----IGNLTNLTYLD 145 (764)
Q Consensus 76 ~n-~i~~~-~~~~~~~l~~L~~L~L~~n~l~~~~~~~~----~~l~~L~~L~L~~n~l~~~~~~~----~~~l~~L~~L~ 145 (764)
+| .++.. .+..+..+++|++|+|++|.+++..+..+ ..+++|++|++++|. ..+.... +.++++|++|+
T Consensus 139 ~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~~-~~~~~~~l~~l~~~~~~L~~L~ 217 (594)
T 2p1m_B 139 SCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLA-SEVSFSALERLVTRCPNLKSLK 217 (594)
T ss_dssp SCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECTTCC-SCCCHHHHHHHHHHCTTCCEEE
T ss_pred CcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEecccC-CcCCHHHHHHHHHhCCCCcEEe
Confidence 88 55532 33445578899999999998775444333 366789999999887 2222222 34568899999
Q ss_pred cccC-cccccCCccccCCCCCCeeecccCC--------------------------CCCC----CCCccccCCCccEEEe
Q 004268 146 LSLN-QLSGRLPQEVGNLKNLKSLFLDNNH--------------------------LSGP----IPSTLYHLNQLATLCL 194 (764)
Q Consensus 146 L~~n-~l~~~~~~~~~~l~~L~~L~L~~n~--------------------------i~~~----~~~~~~~l~~L~~L~l 194 (764)
|++| .+.+ .+..+..+++|++|++..+. +... .+..+..+++|++|++
T Consensus 218 L~~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~~l~~~~~L~~Ls~~~~~~~~~l~~~~~~~~~L~~L~L 296 (594)
T 2p1m_B 218 LNRAVPLEK-LATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVALSGCKELRCLSGFWDAVPAYLPAVYSVCSRLTTLNL 296 (594)
T ss_dssp CCTTSCHHH-HHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHHHHHTCTTCCEEECCBTCCGGGGGGGHHHHTTCCEEEC
T ss_pred cCCCCcHHH-HHHHHhcCCcceEcccccccCccchhhHHHHHHHHhcCCCcccccCCcccchhhHHHHHHhhCCCCEEEc
Confidence 9888 4443 45556667777777655442 1111 1222335788999999
Q ss_pred cCccCcCCcc-cccCCccccceeeccCcccccc-cCccccCCCCCCEEEccC---------CcccCCCCcCCc-CCCCCC
Q 004268 195 GYNKLVGPVT-KEVGNMKNLDRLHLNGNNLTGS-IPSTIGYLNLLDELHLSH---------NRLDGPIPPTIG-NLTNLI 262 (764)
Q Consensus 195 ~~n~i~~~~~-~~~~~l~~L~~L~L~~n~l~~~-~~~~~~~l~~L~~L~L~~---------n~l~~~~~~~~~-~l~~L~ 262 (764)
++|.+..... ..+..+++|++|++++| +++. .+.....+++|++|+++. +.+++.....+. .+++|+
T Consensus 297 ~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~ 375 (594)
T 2p1m_B 297 SYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLE 375 (594)
T ss_dssp TTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCC
T ss_pred cCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHH
Confidence 9998663222 23567889999999988 4422 222233578899998843 445432222222 478899
Q ss_pred eEEccCCcccCCCCcccc-CCCCCCeEecc--C----ccccCCCCC-----CCCCCCccceEEccCCcCccCCChhhhc-
Q 004268 263 ALDLSSNQLSGLLPREVG-NLKYLASLSLN--G----NILIGPIPP-----TIGYLTNLTYLNLGYNRLSSSIPPELMN- 329 (764)
Q Consensus 263 ~L~L~~n~l~~~~~~~~~-~l~~L~~L~l~--~----n~l~~~~~~-----~~~~l~~L~~L~ls~N~l~~~~~~~~~~- 329 (764)
.|+++.|.+++.....+. .+++|+.|+++ + |.+++.... .+..+++|+.|+|++ .+++..+..+..
T Consensus 376 ~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~ 454 (594)
T 2p1m_B 376 SVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTY 454 (594)
T ss_dssp EEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHH
T ss_pred HHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHh
Confidence 999988888765555554 58899999998 4 455422111 145678999999987 666555555555
Q ss_pred ccccceeeccccccccCCchhc-ccccccceeecccccccCCCCC-CCCCCCccceecCCCCccccccCCcc-ccCcccc
Q 004268 330 CSQLLNLVLSHNSLSGSIPSEI-GNLIFFRQLDLSRNFINGTIPS-QLGKIPNISAVDLSKNNLSGVIPASV-RRIPKLI 406 (764)
Q Consensus 330 l~~L~~L~ls~N~l~~~~~~~~-~~l~~L~~L~l~~N~l~~~~~~-~~~~l~~L~~l~l~~N~l~~~~~~~~-~~~~~~~ 406 (764)
+++|++|+|++|.+++..+..+ .++++|+.|+|++|++++.... ....+++|+.|++++|+++......+ ..+|.+.
T Consensus 455 ~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~~lp~l~ 534 (594)
T 2p1m_B 455 AKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVSFGACKLLGQKMPKLN 534 (594)
T ss_dssp CTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCCBHHHHHHHHHHCTTEE
T ss_pred chhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCCCHHHHHHHHHhCCCCE
Confidence 7889999999999876655555 6688999999999998644333 34558899999999999864322222 3445543
No 327
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.93 E-value=3.1e-26 Score=254.60 Aligned_cols=187 Identities=17% Similarity=0.220 Sum_probs=148.1
Q ss_pred CcceeeeecCceeEEEEEECCCCEEEEEEccCCCCCcH-----HHHHHHHHHHHHHHhcCCCceeeEeeEEeeCCEEEEE
Q 004268 511 HIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEP-----AFLESFQTEARLLSQIRHRNIVKLYGFCLHNKCMFLI 585 (764)
Q Consensus 511 ~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~-----~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 585 (764)
...+.||+|+||+||+|.. .++.+++|+......... ...+++.+|++++++++||||+++..++...+..|+|
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 4467899999999999954 488999998765443322 1245689999999999999999655555566677999
Q ss_pred EEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeeccccccCC
Q 004268 586 YEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLARLLHP 665 (764)
Q Consensus 586 ~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 665 (764)
|||+++++|.+++.. +..++.|++.||+||| ++||+||||||+||+++. .+||+|||+++....
T Consensus 418 mE~~~ggsL~~~l~~-----------~~~i~~qi~~aL~~LH---~~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~ 481 (540)
T 3en9_A 418 MSYINGKLAKDVIED-----------NLDIAYKIGEIVGKLH---KNDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNL 481 (540)
T ss_dssp EECCCSEEHHHHSTT-----------CTHHHHHHHHHHHHHH---HTTEECTTCCTTSEEESS--SEEECCCTTCEECCC
T ss_pred EECCCCCCHHHHHHH-----------HHHHHHHHHHHHHHHH---HCcCccCCCCHHHEEECC--eEEEEECccCEECCC
Confidence 999999999999873 4579999999999999 899999999999999998 999999999988754
Q ss_pred CCCC-------ceeccccccccccccccc--CCCCccchHHHHHHHHHHHHhCCCCCC
Q 004268 666 DSSN-------RTLVVGTYGYIAPELAYT--MAVTEKCDVYSFGVVALEVLMGSHPTD 714 (764)
Q Consensus 666 ~~~~-------~~~~~g~~~y~aPE~~~~--~~~~~~~DiwslG~il~~lltg~~Pf~ 714 (764)
.... .....||+.|+|||++.. ..|+..+|+|+.++-..+-+.++.+|.
T Consensus 482 ~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 482 DEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp HHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred ccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 3221 134689999999999987 567888999999999999888888875
No 328
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.92 E-value=1.6e-24 Score=222.14 Aligned_cols=202 Identities=27% Similarity=0.220 Sum_probs=111.3
Q ss_pred cccCCCeeEEEeCCCCccccCCccccCCCCCcEEEcCCCcCcccCCccccCCCCCCEEEccCCcCcccCCcccCCCCCCC
Q 004268 15 FTCFPNLVTFRIWGTLLSGRMPSEIGALSKLEKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTGTIPSEIGSLRDLL 94 (764)
Q Consensus 15 ~~~~~~l~~L~l~~~~~~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~ 94 (764)
++++++++++++++++++ .+|..+. +++++|+|++|.+++..+..|..+++|++|+|++|.|++..+ ...+++|+
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~ 80 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQV--DGTLPVLG 80 (290)
T ss_dssp EECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEEC--CSCCTTCC
T ss_pred ccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccC--CCCCCcCC
Confidence 455566666666666665 3444432 456666666666665555556666666666666666654322 24555666
Q ss_pred EEecCCCcccccCCccCcCCCCCCEEEccCCcCcccCCccccCCCCcCEEecccCcccccCCccccCCCCCCeeecccCC
Q 004268 95 DLNLSNNILNGSIPLEFGNLKDLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNLKSLFLDNNH 174 (764)
Q Consensus 95 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 174 (764)
+|+|++|.++ ..|..+.++++|++|+|++|+++++++..|.++++|++|+|++|+++.+.+..|..+++|+.|+|++|+
T Consensus 81 ~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 159 (290)
T 1p9a_G 81 TLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNN 159 (290)
T ss_dssp EEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSC
T ss_pred EEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCc
Confidence 6666666665 334455555666666666666655555555556666666666666555555555555555555555555
Q ss_pred CCCCCCCccccCCCccEEEecCccCcCCcccccCCccccceeeccCccc
Q 004268 175 LSGPIPSTLYHLNQLATLCLGYNKLVGPVTKEVGNMKNLDRLHLNGNNL 223 (764)
Q Consensus 175 i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l 223 (764)
++.+.+..|..+++|+.|+|++|++..++.. +..+++|+.|+|++|.+
T Consensus 160 l~~l~~~~~~~l~~L~~L~L~~N~l~~ip~~-~~~~~~L~~l~L~~Np~ 207 (290)
T 1p9a_G 160 LTELPAGLLNGLENLDTLLLQENSLYTIPKG-FFGSHLLPFAFLHGNPW 207 (290)
T ss_dssp CSCCCTTTTTTCTTCCEEECCSSCCCCCCTT-TTTTCCCSEEECCSCCB
T ss_pred CCccCHHHhcCcCCCCEEECCCCcCCccChh-hcccccCCeEEeCCCCc
Confidence 5555544555555555555555555543322 22233444444444444
No 329
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.92 E-value=6.4e-25 Score=223.46 Aligned_cols=227 Identities=24% Similarity=0.270 Sum_probs=140.5
Q ss_pred CeeEEEeCCCCccccCCccccCCCCCcEEEcCCCcCcccCCccccCCCCCCEEEccCCcCcccCCcccCCCCCCCEEecC
Q 004268 20 NLVTFRIWGTLLSGRMPSEIGALSKLEKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLDLNLS 99 (764)
Q Consensus 20 ~l~~L~l~~~~~~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~ 99 (764)
++..+++.++.+... ..+..+++|+.|++++|.++.. ..+..+++|++|+|++|.+++. ..+..+++|++|+|+
T Consensus 20 ~l~~l~l~~~~~~~~--~~~~~l~~L~~L~l~~~~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~ 93 (272)
T 3rfs_A 20 ETIKANLKKKSVTDA--VTQNELNSIDQIIANNSDIKSV--QGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILT 93 (272)
T ss_dssp HHHHHHHTCSCTTSE--ECHHHHTTCCEEECTTSCCCCC--TTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECT
T ss_pred HHHHHHhcCcccccc--cccccccceeeeeeCCCCcccc--cccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECC
Confidence 444455555555433 3344556666666666666532 2356666666666666666632 356666666666666
Q ss_pred CCcccccCCccCcCCCCCCEEEccCCcCcccCCccccCCCCcCEEecccCcccccCCccccCCCCCCeeecccCCCCCCC
Q 004268 100 NNILNGSIPLEFGNLKDLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNLKSLFLDNNHLSGPI 179 (764)
Q Consensus 100 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~ 179 (764)
+|.++++.+..|.++++|++|+|++|+++++.+..|.++++|++|+|++|+++++.+..|.++++|+.|++++|.++++.
T Consensus 94 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 173 (272)
T 3rfs_A 94 GNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLP 173 (272)
T ss_dssp TSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCC
T ss_pred CCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccC
Confidence 66666665556666666666666666666666666666666666666666666665555666666666666666666665
Q ss_pred CCccccCCCccEEEecCccCcCCcccccCCccccceeeccCcccccccCccccCCCCCCEEEccCCcccCCCCcCCcCCC
Q 004268 180 PSTLYHLNQLATLCLGYNKLVGPVTKEVGNMKNLDRLHLNGNNLTGSIPSTIGYLNLLDELHLSHNRLDGPIPPTIGNLT 259 (764)
Q Consensus 180 ~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~ 259 (764)
+..+..+++|++|++++|++..+.+..+..+++|+.|++++|.+.+ .++.|+.|+++.|.+.+.+|..++.++
T Consensus 174 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~-------~~~~l~~l~~~~n~~~g~ip~~~~~~~ 246 (272)
T 3rfs_A 174 EGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVVRNSAGSVA 246 (272)
T ss_dssp TTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC-------CTTTTHHHHHHHHHTGGGBBCTTSCBC
T ss_pred HHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccc-------cCcHHHHHHHHHHhCCCcccCcccccC
Confidence 5556666666666666666666666666666666666666666553 234566666666666666666655544
No 330
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.92 E-value=3.7e-25 Score=225.25 Aligned_cols=188 Identities=28% Similarity=0.244 Sum_probs=100.3
Q ss_pred ccCCCccEEEecCccCcCCcccccCCccccceeeccCcccccccCccccCCCCCCEEEccCCcccCCCCcCCcCCCCCCe
Q 004268 184 YHLNQLATLCLGYNKLVGPVTKEVGNMKNLDRLHLNGNNLTGSIPSTIGYLNLLDELHLSHNRLDGPIPPTIGNLTNLIA 263 (764)
Q Consensus 184 ~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 263 (764)
..+++|+.|++++|.+..+ ..+..+++|++|++++|.+++..+..+..+++|++|+|++|.+++..+..|..+++|++
T Consensus 60 ~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 137 (272)
T 3rfs_A 60 QYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTY 137 (272)
T ss_dssp GGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCE
T ss_pred ccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCE
Confidence 3334444444444443332 13444444455555555444444444455555555555555555444444555555555
Q ss_pred EEccCCcccCCCCccccCCCCCCeEeccCccccCCCCCCCCCCCccceEEccCCcCccCCChhhhcccccceeecccccc
Q 004268 264 LDLSSNQLSGLLPREVGNLKYLASLSLNGNILIGPIPPTIGYLTNLTYLNLGYNRLSSSIPPELMNCSQLLNLVLSHNSL 343 (764)
Q Consensus 264 L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l 343 (764)
|+|++|.+++..+..|..+++|+.|++++|++++..+..+..+++|++|++++|++++..+..+..+++|++|++++|++
T Consensus 138 L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~ 217 (272)
T 3rfs_A 138 LNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPW 217 (272)
T ss_dssp EECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCB
T ss_pred EECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCc
Confidence 55555555555554555555555555555555555555555556666666666666655555555666666666666655
Q ss_pred ccCCchhcccccccceeecccccccCCCCCCCCCCCc
Q 004268 344 SGSIPSEIGNLIFFRQLDLSRNFINGTIPSQLGKIPN 380 (764)
Q Consensus 344 ~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~ 380 (764)
.+. +++|+.|+++.|.+++.+|..+..++.
T Consensus 218 ~~~-------~~~l~~l~~~~n~~~g~ip~~~~~~~~ 247 (272)
T 3rfs_A 218 DCT-------CPGIRYLSEWINKHSGVVRNSAGSVAP 247 (272)
T ss_dssp CCC-------TTTTHHHHHHHHHTGGGBBCTTSCBCG
T ss_pred ccc-------CcHHHHHHHHHHhCCCcccCcccccCC
Confidence 532 334566666666666666666655543
No 331
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.92 E-value=2.8e-24 Score=220.41 Aligned_cols=132 Identities=27% Similarity=0.327 Sum_probs=60.2
Q ss_pred ccCCCCCcEEEcCCCcCcccCCccccCCCCCCEEEccCCcCcccCCcccCCCCCCCEEecCCCcccccCCccCcCCCCCC
Q 004268 39 IGALSKLEKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLDLNLSNNILNGSIPLEFGNLKDLD 118 (764)
Q Consensus 39 ~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 118 (764)
+..+++++++++++|.++. +|..+. +++++|+|++|.|++..+..|..+++|++|+|++|.++.+.+. ..+++|+
T Consensus 6 ~~~l~~l~~l~~~~~~l~~-ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L~ 80 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLTA-LPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVLG 80 (290)
T ss_dssp EECSTTCCEEECTTSCCSS-CCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTCC
T ss_pred ccccCCccEEECCCCCCCc-CCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcCC
Confidence 4445555555555555552 232222 3455555555555544444555555555555555555433221 3444444
Q ss_pred EEEccCCcCcccCCccccCCCCcCEEecccCcccccCCccccCCCCCCeeecccCCCC
Q 004268 119 QLRLQGNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNLKSLFLDNNHLS 176 (764)
Q Consensus 119 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~ 176 (764)
+|+|++|+++.+ |..+.++++|++|+|++|+++.+.+..|.++++|++|+|++|+++
T Consensus 81 ~L~Ls~N~l~~l-~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~ 137 (290)
T 1p9a_G 81 TLDLSHNQLQSL-PLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELK 137 (290)
T ss_dssp EEECCSSCCSSC-CCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCC
T ss_pred EEECCCCcCCcC-chhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCC
Confidence 444444444422 233444444444444444444333334444444444444444433
No 332
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.92 E-value=2.4e-28 Score=279.04 Aligned_cols=373 Identities=17% Similarity=0.157 Sum_probs=262.3
Q ss_pred ccCCCeeEEEeCCCCccccCCcccc-CCCCCcEEEcCCC-cCccc-CCccccCCCCCCEEEccCCcCcccCCccc----C
Q 004268 16 TCFPNLVTFRIWGTLLSGRMPSEIG-ALSKLEKLVLSHN-SLTGR-IPSEIGALSRLKVLDLSYNRLTGTIPSEI----G 88 (764)
Q Consensus 16 ~~~~~l~~L~l~~~~~~~~~~~~~~-~l~~L~~L~Ls~n-~i~~~-~~~~~~~l~~L~~L~L~~n~i~~~~~~~~----~ 88 (764)
..+++|+.|++++|.+++..+..+. .+++|++|+|++| .+++. .+..+..+++|++|+|++|.++...+..+ .
T Consensus 102 ~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~ 181 (594)
T 2p1m_B 102 SSYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPD 181 (594)
T ss_dssp HHCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCT
T ss_pred HhCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhh
Confidence 4678999999999999887777776 6899999999999 66532 34444578999999999999875444333 3
Q ss_pred CCCCCCEEecCCCc--cccc-CCccCcCCCCCCEEEccCC-cCcccCCccccCCCCcCEEecccCc--------------
Q 004268 89 SLRDLLDLNLSNNI--LNGS-IPLEFGNLKDLDQLRLQGN-KLDGLIPSSIGNLTNLTYLDLSLNQ-------------- 150 (764)
Q Consensus 89 ~l~~L~~L~L~~n~--l~~~-~~~~~~~l~~L~~L~L~~n-~l~~~~~~~~~~l~~L~~L~L~~n~-------------- 150 (764)
.+++|++|+|++|. ++.. ....+..+++|++|+|++| .+.+ .+..+..+++|++|+++.+.
T Consensus 182 ~~~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~~ 260 (594)
T 2p1m_B 182 TYTSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEK-LATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVA 260 (594)
T ss_dssp TCCCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHHH-HHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHHH
T ss_pred cCCcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHHH-HHHHHhcCCcceEcccccccCccchhhHHHHHHH
Confidence 67799999999997 2211 1112345699999999998 4444 55667778888888765542
Q ss_pred ------------cccc----CCccccCCCCCCeeecccCCCCCCC-CCccccCCCccEEEecCccCcCCccc-ccCCccc
Q 004268 151 ------------LSGR----LPQEVGNLKNLKSLFLDNNHLSGPI-PSTLYHLNQLATLCLGYNKLVGPVTK-EVGNMKN 212 (764)
Q Consensus 151 ------------l~~~----~~~~~~~l~~L~~L~L~~n~i~~~~-~~~~~~l~~L~~L~l~~n~i~~~~~~-~~~~l~~ 212 (764)
+... .+..+..+++|++|+|++|.+++.. ...+..+++|++|++++| +...... ....+++
T Consensus 261 l~~~~~L~~Ls~~~~~~~~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~ 339 (594)
T 2p1m_B 261 LSGCKELRCLSGFWDAVPAYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKD 339 (594)
T ss_dssp HHTCTTCCEEECCBTCCGGGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTT
T ss_pred HhcCCCcccccCCcccchhhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCC
Confidence 1111 2222336789999999999976321 122458899999999998 4422222 2235789
Q ss_pred cceeecc---------CcccccccCcccc-CCCCCCEEEccCCcccCCCCcCCc-CCCCCCeEEcc--C----CcccCCC
Q 004268 213 LDRLHLN---------GNNLTGSIPSTIG-YLNLLDELHLSHNRLDGPIPPTIG-NLTNLIALDLS--S----NQLSGLL 275 (764)
Q Consensus 213 L~~L~L~---------~n~l~~~~~~~~~-~l~~L~~L~L~~n~l~~~~~~~~~-~l~~L~~L~L~--~----n~l~~~~ 275 (764)
|++|+++ .+.+++.....+. .+++|+.|.++.|.+++.....+. .+++|+.|+|+ + |.+++..
T Consensus 340 L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~ 419 (594)
T 2p1m_B 340 LRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEP 419 (594)
T ss_dssp CCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCC
T ss_pred CCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCc
Confidence 9999984 3455543333333 489999999999999865444454 58999999999 4 5665322
Q ss_pred C-----ccccCCCCCCeEeccCccccCCCCCCCCC-CCccceEEccCCcCccCCChhh-hcccccceeeccccccccCCc
Q 004268 276 P-----REVGNLKYLASLSLNGNILIGPIPPTIGY-LTNLTYLNLGYNRLSSSIPPEL-MNCSQLLNLVLSHNSLSGSIP 348 (764)
Q Consensus 276 ~-----~~~~~l~~L~~L~l~~n~l~~~~~~~~~~-l~~L~~L~ls~N~l~~~~~~~~-~~l~~L~~L~ls~N~l~~~~~ 348 (764)
. ..+..+++|+.|++++ .+++.....+.. +++|++|+|++|.+++..+..+ .++++|++|+|++|++++...
T Consensus 420 ~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~ 498 (594)
T 2p1m_B 420 LDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKAL 498 (594)
T ss_dssp THHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHH
T ss_pred hhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHH
Confidence 2 2267789999999987 555433333443 7899999999999986555555 678999999999999975544
Q ss_pred h-hcccccccceeecccccccCCCCCCC-CCCCccceecCCCCcc
Q 004268 349 S-EIGNLIFFRQLDLSRNFINGTIPSQL-GKIPNISAVDLSKNNL 391 (764)
Q Consensus 349 ~-~~~~l~~L~~L~l~~N~l~~~~~~~~-~~l~~L~~l~l~~N~l 391 (764)
. ....+++|+.|++++|+++......+ ..+|+++...+..+.-
T Consensus 499 ~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~~lp~l~i~~~~~~~~ 543 (594)
T 2p1m_B 499 LANASKLETMRSLWMSSCSVSFGACKLLGQKMPKLNVEVIDERGA 543 (594)
T ss_dssp HHTGGGGGGSSEEEEESSCCBHHHHHHHHHHCTTEEEEEECSSSC
T ss_pred HHHHHhCCCCCEEeeeCCCCCHHHHHHHHHhCCCCEEEEecCCCc
Confidence 4 34568999999999999853322333 4567776666655543
No 333
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.92 E-value=1.5e-24 Score=216.36 Aligned_cols=196 Identities=18% Similarity=0.182 Sum_probs=95.8
Q ss_pred CCCEEEccCCcCcccCCcccCCCCCCCEEecCCCc-ccccCCccCcCCCCCCEEEccC-CcCcccCCccccCCCCcCEEe
Q 004268 68 RLKVLDLSYNRLTGTIPSEIGSLRDLLDLNLSNNI-LNGSIPLEFGNLKDLDQLRLQG-NKLDGLIPSSIGNLTNLTYLD 145 (764)
Q Consensus 68 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~-l~~~~~~~~~~l~~L~~L~L~~-n~l~~~~~~~~~~l~~L~~L~ 145 (764)
+|++|+|++|+|++..+..|..+++|++|+|++|. ++.+.+.+|.++++|++|++++ |+++.+.+..|.++++|++|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~ 111 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLG 111 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEe
Confidence 45555555555554444455555555555555554 5544444555555555555555 555555555555555555555
Q ss_pred cccCcccccCCccccCCCCCC---eeecccC-CCCCCCCCccccCCCcc-EEEecCccCcCCcccccCCccccceeeccC
Q 004268 146 LSLNQLSGRLPQEVGNLKNLK---SLFLDNN-HLSGPIPSTLYHLNQLA-TLCLGYNKLVGPVTKEVGNMKNLDRLHLNG 220 (764)
Q Consensus 146 L~~n~l~~~~~~~~~~l~~L~---~L~L~~n-~i~~~~~~~~~~l~~L~-~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~ 220 (764)
+++|+++++ |. |.++++|+ +|++++| .++.+.+..|..+++|+ .|++++|+++.++...|.. ++|++|++++
T Consensus 112 l~~n~l~~l-p~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~-~~L~~L~L~~ 188 (239)
T 2xwt_C 112 IFNTGLKMF-PD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNG-TKLDAVYLNK 188 (239)
T ss_dssp EEEECCCSC-CC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTT-CEEEEEECTT
T ss_pred CCCCCCccc-cc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCC-CCCCEEEcCC
Confidence 555555532 22 44444444 5555555 44444444444444444 4444444444433333333 4455555555
Q ss_pred cc-cccccCccccCC-CCCCEEEccCCcccCCCCcCCcCCCCCCeEEccCC
Q 004268 221 NN-LTGSIPSTIGYL-NLLDELHLSHNRLDGPIPPTIGNLTNLIALDLSSN 269 (764)
Q Consensus 221 n~-l~~~~~~~~~~l-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 269 (764)
|+ ++.+.+..|..+ ++|+.|++++|.++.+.+. .+++|+.|+++++
T Consensus 189 n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~---~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 189 NKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK---GLEHLKELIARNT 236 (239)
T ss_dssp CTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT---TCTTCSEEECTTC
T ss_pred CCCcccCCHHHhhccccCCcEEECCCCccccCChh---HhccCceeeccCc
Confidence 52 444444444444 4455555555554432222 2344444444443
No 334
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.91 E-value=1.8e-24 Score=215.86 Aligned_cols=205 Identities=18% Similarity=0.170 Sum_probs=180.1
Q ss_pred ccccCCccccCCCCCcEEEcCCCcCcccCCccccCCCCCCEEEccCCc-CcccCCcccCCCCCCCEEecCC-CcccccCC
Q 004268 31 LSGRMPSEIGALSKLEKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNR-LTGTIPSEIGSLRDLLDLNLSN-NILNGSIP 108 (764)
Q Consensus 31 ~~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~-i~~~~~~~~~~l~~L~~L~L~~-n~l~~~~~ 108 (764)
++ .+|. +. +++++|++++|+++++.+..|.++++|++|+|++|+ ++.+.+.+|..+++|++|+|++ |.++.+.+
T Consensus 23 l~-~ip~-~~--~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~ 98 (239)
T 2xwt_C 23 IQ-RIPS-LP--PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDP 98 (239)
T ss_dssp CS-SCCC-CC--TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECT
T ss_pred cc-ccCC-CC--CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCH
Confidence 54 5666 43 489999999999998888899999999999999997 8877777899999999999998 99998888
Q ss_pred ccCcCCCCCCEEEccCCcCcccCCccccCCCCcC---EEecccC-cccccCCccccCCCCCC-eeecccCCCCCCCCCcc
Q 004268 109 LEFGNLKDLDQLRLQGNKLDGLIPSSIGNLTNLT---YLDLSLN-QLSGRLPQEVGNLKNLK-SLFLDNNHLSGPIPSTL 183 (764)
Q Consensus 109 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~---~L~L~~n-~l~~~~~~~~~~l~~L~-~L~L~~n~i~~~~~~~~ 183 (764)
..|.++++|++|++++|++++++ . |..+++|+ +|++++| .++.+.+..|.++++|+ +|++++|.++.+.+..|
T Consensus 99 ~~f~~l~~L~~L~l~~n~l~~lp-~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~ 176 (239)
T 2xwt_C 99 DALKELPLLKFLGIFNTGLKMFP-D-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAF 176 (239)
T ss_dssp TSEECCTTCCEEEEEEECCCSCC-C-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTT
T ss_pred HHhCCCCCCCEEeCCCCCCcccc-c-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhc
Confidence 89999999999999999999854 3 88888888 9999999 99988888899999999 99999999997777677
Q ss_pred ccCCCccEEEecCcc-CcCCcccccCCc-cccceeeccCcccccccCccccCCCCCCEEEccCC
Q 004268 184 YHLNQLATLCLGYNK-LVGPVTKEVGNM-KNLDRLHLNGNNLTGSIPSTIGYLNLLDELHLSHN 245 (764)
Q Consensus 184 ~~l~~L~~L~l~~n~-i~~~~~~~~~~l-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 245 (764)
.. ++|+.|++++|+ ++.+.+..|..+ ++|++|++++|+++.+.+. .+++|+.|+++++
T Consensus 177 ~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~---~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 177 NG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK---GLEHLKELIARNT 236 (239)
T ss_dssp TT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT---TCTTCSEEECTTC
T ss_pred CC-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccCChh---HhccCceeeccCc
Confidence 66 899999999995 998888889999 9999999999999965544 5778999998876
No 335
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.91 E-value=8e-26 Score=240.45 Aligned_cols=108 Identities=20% Similarity=0.143 Sum_probs=51.4
Q ss_pred EEeCCCCccccCCccccCCCCCcEEEcCCCcCcccCC----ccccCCC-CCCEEEccCCcCcccCCcccCCC-----CCC
Q 004268 24 FRIWGTLLSGRMPSEIGALSKLEKLVLSHNSLTGRIP----SEIGALS-RLKVLDLSYNRLTGTIPSEIGSL-----RDL 93 (764)
Q Consensus 24 L~l~~~~~~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~----~~~~~l~-~L~~L~L~~n~i~~~~~~~~~~l-----~~L 93 (764)
++++.|++++.+|..+...++|++|+|++|.+++..+ ..|..++ +|++|+|++|+|+...+..+..+ ++|
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L 82 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANV 82 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTC
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCc
Confidence 3445555555555544444445555555555554443 4444454 55555555555554433333332 455
Q ss_pred CEEecCCCcccccCCcc----CcCC-CCCCEEEccCCcCcccC
Q 004268 94 LDLNLSNNILNGSIPLE----FGNL-KDLDQLRLQGNKLDGLI 131 (764)
Q Consensus 94 ~~L~L~~n~l~~~~~~~----~~~l-~~L~~L~L~~n~l~~~~ 131 (764)
++|+|++|.++...+.. +..+ ++|++|+|++|+++...
T Consensus 83 ~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~ 125 (362)
T 3goz_A 83 TSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKS 125 (362)
T ss_dssp CEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSC
T ss_pred cEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHH
Confidence 55555555554333332 2222 44555555555544433
No 336
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.91 E-value=1e-25 Score=239.65 Aligned_cols=107 Identities=23% Similarity=0.243 Sum_probs=52.9
Q ss_pred EEcCCCcCcccCCccccCCCCCCEEEccCCcCcccCC----cccCCCC-CCCEEecCCCcccccCCccCcCC-----CCC
Q 004268 48 LVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTGTIP----SEIGSLR-DLLDLNLSNNILNGSIPLEFGNL-----KDL 117 (764)
Q Consensus 48 L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~----~~~~~l~-~L~~L~L~~n~l~~~~~~~~~~l-----~~L 117 (764)
+++++|.+++.+|..+...++|++|+|++|.++...+ .+|..++ +|++|+|++|.++...+..|..+ ++|
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L 82 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANV 82 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTC
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCc
Confidence 4555555555555444444445555555555554333 4455555 55555555555554444444332 555
Q ss_pred CEEEccCCcCcccCCcccc----CC-CCcCEEecccCccccc
Q 004268 118 DQLRLQGNKLDGLIPSSIG----NL-TNLTYLDLSLNQLSGR 154 (764)
Q Consensus 118 ~~L~L~~n~l~~~~~~~~~----~l-~~L~~L~L~~n~l~~~ 154 (764)
++|+|++|.++...+..+. .+ ++|++|+|++|++++.
T Consensus 83 ~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~ 124 (362)
T 3goz_A 83 TSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSK 124 (362)
T ss_dssp CEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGS
T ss_pred cEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcH
Confidence 5555555555544333222 22 4455555555554433
No 337
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.91 E-value=3e-23 Score=208.44 Aligned_cols=180 Identities=30% Similarity=0.338 Sum_probs=137.1
Q ss_pred CCeeEEEeCCCCccccCCccccCCCCCcEEEcCCCcCcccCCccccCCCCCCEEEccCCcCcccCCcccCCCCCCCEEec
Q 004268 19 PNLVTFRIWGTLLSGRMPSEIGALSKLEKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLDLNL 98 (764)
Q Consensus 19 ~~l~~L~l~~~~~~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L 98 (764)
++.+.++++++.++ .+|..+. ++++.|+|++|.+++..+..|.++++|++|+|++|.|++..+..|..+++|++|+|
T Consensus 14 ~~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 90 (251)
T 3m19_A 14 EGKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGL 90 (251)
T ss_dssp GGGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEEC
Confidence 56677888888776 5565554 47788888888887777777788888888888888887777777777888888888
Q ss_pred CCCcccccCCccCcCCCCCCEEEccCCcCcccCCccccCCCCcCEEecccCcccccCCccccCCCCCCeeecccCCCCCC
Q 004268 99 SNNILNGSIPLEFGNLKDLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNLKSLFLDNNHLSGP 178 (764)
Q Consensus 99 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~ 178 (764)
++|.++.+.+..|.++++|++|+|++|+++++++..|.++++|++|+|++|+++++.+..|.++++|++|+|++|+++++
T Consensus 91 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 170 (251)
T 3m19_A 91 ANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSV 170 (251)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCcc
Confidence 88888777777777778888888888888777777777777888888888887777666777777777777777777777
Q ss_pred CCCccccCCCccEEEecCccCcC
Q 004268 179 IPSTLYHLNQLATLCLGYNKLVG 201 (764)
Q Consensus 179 ~~~~~~~l~~L~~L~l~~n~i~~ 201 (764)
.+..+..+++|+.|++++|.+..
T Consensus 171 ~~~~~~~l~~L~~L~l~~N~~~c 193 (251)
T 3m19_A 171 PHGAFDRLGKLQTITLFGNQFDC 193 (251)
T ss_dssp CTTTTTTCTTCCEEECCSCCBCT
T ss_pred CHHHHhCCCCCCEEEeeCCceeC
Confidence 66677777777777777777653
No 338
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.90 E-value=2.3e-23 Score=215.79 Aligned_cols=192 Identities=26% Similarity=0.366 Sum_probs=99.4
Q ss_pred CCCCCcEEEcCCCcCcccCCccccCCCCCCEEEccCCcCcccCCcccCCCCCCCEEecCCCcccccCCccCcCCCCCCEE
Q 004268 41 ALSKLEKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLDLNLSNNILNGSIPLEFGNLKDLDQL 120 (764)
Q Consensus 41 ~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 120 (764)
.+++|++|++++|.++.. + .+..+++|++|+|++|.++...+ +..+++|++|+|++|.++++ ..|..+++|++|
T Consensus 39 ~l~~L~~L~l~~~~i~~l-~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~--~~~~~l~~L~~L 112 (308)
T 1h6u_A 39 DLDGITTLSAFGTGVTTI-E-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV--SAIAGLQSIKTL 112 (308)
T ss_dssp HHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC--GGGTTCTTCCEE
T ss_pred HcCCcCEEEeeCCCccCc-h-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc--hhhcCCCCCCEE
Confidence 344555555555555432 2 34455555555555555553222 55555555555555555432 234555555555
Q ss_pred EccCCcCcccCCccccCCCCcCEEecccCcccccCCccccCCCCCCeeecccCCCCCCCCCccccCCCccEEEecCccCc
Q 004268 121 RLQGNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNLKSLFLDNNHLSGPIPSTLYHLNQLATLCLGYNKLV 200 (764)
Q Consensus 121 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~ 200 (764)
+|++|+++++. .+..+++|++|+|++|+++++.+ +.++++|+.|++++|.++++.+ +..+++|+.|++++|.+.
T Consensus 113 ~l~~n~l~~~~--~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~ 186 (308)
T 1h6u_A 113 DLTSTQITDVT--PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKIS 186 (308)
T ss_dssp ECTTSCCCCCG--GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC
T ss_pred ECCCCCCCCch--hhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCccC
Confidence 55555555432 25555555555555555554322 5555555555555555554322 455555555555555555
Q ss_pred CCcccccCCccccceeeccCcccccccCccccCCCCCCEEEccCCccc
Q 004268 201 GPVTKEVGNMKNLDRLHLNGNNLTGSIPSTIGYLNLLDELHLSHNRLD 248 (764)
Q Consensus 201 ~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 248 (764)
.+.+ +..+++|++|++++|++++.. .+..+++|+.|+|++|.++
T Consensus 187 ~~~~--l~~l~~L~~L~L~~N~l~~~~--~l~~l~~L~~L~l~~N~i~ 230 (308)
T 1h6u_A 187 DISP--LASLPNLIEVHLKNNQISDVS--PLANTSNLFIVTLTNQTIT 230 (308)
T ss_dssp CCGG--GGGCTTCCEEECTTSCCCBCG--GGTTCTTCCEEEEEEEEEE
T ss_pred cChh--hcCCCCCCEEEccCCccCccc--cccCCCCCCEEEccCCeee
Confidence 4432 555566666666666665443 2555666666666666665
No 339
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.90 E-value=1.1e-23 Score=218.93 Aligned_cols=201 Identities=22% Similarity=0.237 Sum_probs=107.7
Q ss_pred CCCEEecCCCcccccCCccC--cCCCCCCEEEccCCcCcccCC----ccccCCCCcCEEecccCcccccCCccccCCCCC
Q 004268 92 DLLDLNLSNNILNGSIPLEF--GNLKDLDQLRLQGNKLDGLIP----SSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNL 165 (764)
Q Consensus 92 ~L~~L~L~~n~l~~~~~~~~--~~l~~L~~L~L~~n~l~~~~~----~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 165 (764)
+|++|+|++|.+++..+..+ ..+++|++|+|++|.+++..+ ..+..+++|++|+|++|++.++.+..|.++++|
T Consensus 92 ~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L 171 (310)
T 4glp_A 92 RLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPAL 171 (310)
T ss_dssp CCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTC
T ss_pred ceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCC
Confidence 34444444444444444444 444444444444444443222 222334445555555555544444444455555
Q ss_pred CeeecccCCCCC---C-CCCccccCCCccEEEecCccCcCCccc---ccCCccccceeeccCcccccccCccccCC---C
Q 004268 166 KSLFLDNNHLSG---P-IPSTLYHLNQLATLCLGYNKLVGPVTK---EVGNMKNLDRLHLNGNNLTGSIPSTIGYL---N 235 (764)
Q Consensus 166 ~~L~L~~n~i~~---~-~~~~~~~l~~L~~L~l~~n~i~~~~~~---~~~~l~~L~~L~L~~n~l~~~~~~~~~~l---~ 235 (764)
++|+|++|++.+ + ....+..+++|++|+|++|+++.+... .+..+++|++|+|++|.+++..|..+..+ +
T Consensus 172 ~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~ 251 (310)
T 4glp_A 172 TSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSS 251 (310)
T ss_dssp CEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCT
T ss_pred CEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcC
Confidence 555555554331 1 011223444555555555555432211 23455666677777777666555555444 5
Q ss_pred CCCEEEccCCcccCCCCcCCcCCCCCCeEEccCCcccCCCCccccCCCCCCeEeccCccccC
Q 004268 236 LLDELHLSHNRLDGPIPPTIGNLTNLIALDLSSNQLSGLLPREVGNLKYLASLSLNGNILIG 297 (764)
Q Consensus 236 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 297 (764)
+|+.|+|++|.++ .+|..+. ++|+.|+|++|++++. |. +..+++|+.|++++|++++
T Consensus 252 ~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 252 ALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp TCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSCEECSSTTTSC
T ss_pred cCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccEEECcCCCCCC
Confidence 7777777777777 3444443 6788888888887754 22 5677788888888887753
No 340
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.90 E-value=1.7e-23 Score=216.71 Aligned_cols=208 Identities=26% Similarity=0.437 Sum_probs=129.9
Q ss_pred EEEcCCCcCcccCCccccCCCCCCEEEccCCcCcccCCcccCCCCCCCEEecCCCcccccCCccCcCCCCCCEEEccCCc
Q 004268 47 KLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLDLNLSNNILNGSIPLEFGNLKDLDQLRLQGNK 126 (764)
Q Consensus 47 ~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 126 (764)
.+.+..+.+++.. .+..+++|++|++++|.++. ++ .+..+++|++|+|++|.++++.+ |..+++|++|+|++|+
T Consensus 23 ~~~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~ 96 (308)
T 1h6u_A 23 KIAAGKSNVTDTV--TQADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNP 96 (308)
T ss_dssp HHHTTCSSTTSEE--CHHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCC
T ss_pred HHHhCCCCcCcee--cHHHcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCc
Confidence 3445566665432 24567778888888888874 33 57778888888888888875544 7778888888888888
Q ss_pred CcccCCccccCCCCcCEEecccCcccccCCccccCCCCCCeeecccCCCCCCCCCccccCCCccEEEecCccCcCCcccc
Q 004268 127 LDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNLKSLFLDNNHLSGPIPSTLYHLNQLATLCLGYNKLVGPVTKE 206 (764)
Q Consensus 127 l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~ 206 (764)
++++ ..+..+++|++|+|++|+++++. .+.++++|++|++++|.++++.+ +..+++|+.|++++|.+..+.+
T Consensus 97 l~~~--~~~~~l~~L~~L~l~~n~l~~~~--~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~-- 168 (308)
T 1h6u_A 97 LKNV--SAIAGLQSIKTLDLTSTQITDVT--PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP-- 168 (308)
T ss_dssp CSCC--GGGTTCTTCCEEECTTSCCCCCG--GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--
T ss_pred CCCc--hhhcCCCCCCEEECCCCCCCCch--hhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--
Confidence 7765 35777778888888888877543 37777777777777777765433 5666666666666666654433
Q ss_pred cCCccccceeeccCcccccccCccccCCCCCCEEEccCCcccCCCCcCCcCCCCCCeEEccCCccc
Q 004268 207 VGNMKNLDRLHLNGNNLTGSIPSTIGYLNLLDELHLSHNRLDGPIPPTIGNLTNLIALDLSSNQLS 272 (764)
Q Consensus 207 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 272 (764)
+..+++|++|++++|.+++..+ +..+++|+.|+|++|.+++.. .+..+++|+.|+|++|+++
T Consensus 169 l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~--~l~~l~~L~~L~l~~N~i~ 230 (308)
T 1h6u_A 169 LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVS--PLANTSNLFIVTLTNQTIT 230 (308)
T ss_dssp GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCG--GGTTCTTCCEEEEEEEEEE
T ss_pred hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCccc--cccCCCCCCEEEccCCeee
Confidence 5555555555555555553322 444444555555555444332 2444444444444444443
No 341
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.90 E-value=2.3e-23 Score=220.18 Aligned_cols=154 Identities=19% Similarity=0.162 Sum_probs=84.2
Q ss_pred cEEEcCCCcCcccCCccccCCCCCCEEEccCCcCcccCCcccCCCCCCCEEecCCCcccc-cCCccCcCCCCCCE-EEcc
Q 004268 46 EKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLDLNLSNNILNG-SIPLEFGNLKDLDQ-LRLQ 123 (764)
Q Consensus 46 ~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~-L~L~ 123 (764)
+.++.++++++ .+|..+. +++++|+|++|+|+.+.+.+|.++++|++|+|++|.+.+ +.+.+|.++++|++ +.++
T Consensus 12 ~~v~C~~~~Lt-~iP~~l~--~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~ 88 (350)
T 4ay9_X 12 RVFLCQESKVT-EIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 88 (350)
T ss_dssp TEEEEESTTCC-SCCTTCC--TTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEE
T ss_pred CEEEecCCCCC-ccCcCcC--CCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhccc
Confidence 45666666666 3444442 456666666666665555566666666666666666533 34455666666554 3444
Q ss_pred CCcCcccCCccccCCCCcCEEecccCcccccCCccccCCCCCCeeeccc-CCCCCCCCCccccCC-CccEEEecCccCcC
Q 004268 124 GNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNLKSLFLDN-NHLSGPIPSTLYHLN-QLATLCLGYNKLVG 201 (764)
Q Consensus 124 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~-n~i~~~~~~~~~~l~-~L~~L~l~~n~i~~ 201 (764)
+|+++.+.+++|.++++|++|++++|+++.+.+..+....++..|++.+ |.+..+....|..+. .++.|+|++|+|+.
T Consensus 89 ~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~ 168 (350)
T 4ay9_X 89 ANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQE 168 (350)
T ss_dssp ETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCE
T ss_pred CCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccC
Confidence 5666666666666666666666666666655555555555555555533 344444444443332 24444444444443
Q ss_pred C
Q 004268 202 P 202 (764)
Q Consensus 202 ~ 202 (764)
+
T Consensus 169 i 169 (350)
T 4ay9_X 169 I 169 (350)
T ss_dssp E
T ss_pred C
Confidence 3
No 342
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.90 E-value=5.4e-23 Score=217.38 Aligned_cols=241 Identities=17% Similarity=0.151 Sum_probs=197.1
Q ss_pred eeEEEeCCCCccccCCccccCCCCCcEEEcCCCcCcccCCccccCCCCCCEEEccCCcCcccC-CcccCCCCCCCE-Eec
Q 004268 21 LVTFRIWGTLLSGRMPSEIGALSKLEKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTGTI-PSEIGSLRDLLD-LNL 98 (764)
Q Consensus 21 l~~L~l~~~~~~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~-~~~~~~l~~L~~-L~L 98 (764)
-+++++++++++ .+|..+ .+++++|+|++|+|+.+.+.+|.++++|++|+|++|+|.+.+ +.+|.++++|++ +.+
T Consensus 11 ~~~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~ 87 (350)
T 4ay9_X 11 NRVFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIE 87 (350)
T ss_dssp TTEEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEE
T ss_pred CCEEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcc
Confidence 367899999998 778776 468999999999999888889999999999999999986544 568999999876 667
Q ss_pred CCCcccccCCccCcCCCCCCEEEccCCcCcccCCccccCCCCcCEEeccc-CcccccCCccccCCC-CCCeeecccCCCC
Q 004268 99 SNNILNGSIPLEFGNLKDLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLSL-NQLSGRLPQEVGNLK-NLKSLFLDNNHLS 176 (764)
Q Consensus 99 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~-n~l~~~~~~~~~~l~-~L~~L~L~~n~i~ 176 (764)
++|+++.+.+.+|.++++|++|++++|++..+.+..+....++..|++.+ |++..+.+..|.++. .++.|+|++|+|+
T Consensus 88 ~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~ 167 (350)
T 4ay9_X 88 KANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQ 167 (350)
T ss_dssp EETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCC
T ss_pred cCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhcccccccc
Confidence 78999999999999999999999999999998888888888899999966 688888888888875 6899999999999
Q ss_pred CCCCCccccCCCccEEEec-CccCcCCcccccCCccccceeeccCcccccccCccccCCCCCCEEEccCC-cccCCCCcC
Q 004268 177 GPIPSTLYHLNQLATLCLG-YNKLVGPVTKEVGNMKNLDRLHLNGNNLTGSIPSTIGYLNLLDELHLSHN-RLDGPIPPT 254 (764)
Q Consensus 177 ~~~~~~~~~l~~L~~L~l~-~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n-~l~~~~~~~ 254 (764)
.+.+..|. ..+|++|+++ +|.++.++.+.|..+++|++|++++|+++.+.+..| .+|+.|.+.++ .++ ..| .
T Consensus 168 ~i~~~~f~-~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~---~~L~~L~~l~~~~l~-~lP-~ 241 (350)
T 4ay9_X 168 EIHNSAFN-GTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGL---ENLKKLRARSTYNLK-KLP-T 241 (350)
T ss_dssp EECTTSST-TEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSC---TTCCEEECTTCTTCC-CCC-C
T ss_pred CCChhhcc-ccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhh---ccchHhhhccCCCcC-cCC-C
Confidence 77766664 4689999997 478888888888999999999999999886655444 45555554443 344 444 4
Q ss_pred CcCCCCCCeEEccCCc
Q 004268 255 IGNLTNLIALDLSSNQ 270 (764)
Q Consensus 255 ~~~l~~L~~L~L~~n~ 270 (764)
+..+++|+.++++++.
T Consensus 242 l~~l~~L~~l~l~~~~ 257 (350)
T 4ay9_X 242 LEKLVALMEASLTYPS 257 (350)
T ss_dssp TTTCCSCCEEECSCHH
T ss_pred chhCcChhhCcCCCCc
Confidence 6777778888876653
No 343
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.90 E-value=7.7e-23 Score=205.45 Aligned_cols=180 Identities=28% Similarity=0.292 Sum_probs=142.4
Q ss_pred CCCcEEEcCCCcCcccCCccccCCCCCCEEEccCCcCcccCCcccCCCCCCCEEecCCCcccccCCccCcCCCCCCEEEc
Q 004268 43 SKLEKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLDLNLSNNILNGSIPLEFGNLKDLDQLRL 122 (764)
Q Consensus 43 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 122 (764)
...++++++++.++ .+|..+. ++|+.|+|++|.+++..+..|..+++|++|+|++|.++++.+..|.++++|++|+|
T Consensus 14 ~~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 90 (251)
T 3m19_A 14 EGKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGL 90 (251)
T ss_dssp GGGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEEC
Confidence 35678888888888 4555554 57888888888888777778888888888888888888877777888888888888
Q ss_pred cCCcCcccCCccccCCCCcCEEecccCcccccCCccccCCCCCCeeecccCCCCCCCCCccccCCCccEEEecCccCcCC
Q 004268 123 QGNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNLKSLFLDNNHLSGPIPSTLYHLNQLATLCLGYNKLVGP 202 (764)
Q Consensus 123 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~ 202 (764)
++|+++.+++..|.++++|++|+|++|+++++.+..|.++++|++|+|++|.++++.+..|..+++|++|+|++|++..+
T Consensus 91 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 170 (251)
T 3m19_A 91 ANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSV 170 (251)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCcc
Confidence 88888888777888888888888888888877777778888888888888888877766777777777777777777777
Q ss_pred cccccCCccccceeeccCccccc
Q 004268 203 VTKEVGNMKNLDRLHLNGNNLTG 225 (764)
Q Consensus 203 ~~~~~~~l~~L~~L~L~~n~l~~ 225 (764)
.+..|..+++|+.|++++|.+..
T Consensus 171 ~~~~~~~l~~L~~L~l~~N~~~c 193 (251)
T 3m19_A 171 PHGAFDRLGKLQTITLFGNQFDC 193 (251)
T ss_dssp CTTTTTTCTTCCEEECCSCCBCT
T ss_pred CHHHHhCCCCCCEEEeeCCceeC
Confidence 66667777777777777777654
No 344
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.89 E-value=1.2e-23 Score=218.70 Aligned_cols=226 Identities=18% Similarity=0.126 Sum_probs=184.9
Q ss_pred CCeeEEEeCCCCccccCCc---cccCCCCCcEEEcCCCcCcccCCccc--cCCCCCCEEEccCCcCcccCC----cccCC
Q 004268 19 PNLVTFRIWGTLLSGRMPS---EIGALSKLEKLVLSHNSLTGRIPSEI--GALSRLKVLDLSYNRLTGTIP----SEIGS 89 (764)
Q Consensus 19 ~~l~~L~l~~~~~~~~~~~---~~~~l~~L~~L~Ls~n~i~~~~~~~~--~~l~~L~~L~L~~n~i~~~~~----~~~~~ 89 (764)
..++.|.+.++.++...-. .+..+++|++|++++|.+++..|..+ ..+++|++|+|++|.+++..+ ..+..
T Consensus 64 ~~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~ 143 (310)
T 4glp_A 64 LRVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWL 143 (310)
T ss_dssp CCCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTB
T ss_pred cceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhh
Confidence 4578899998887532111 12345679999999999998898888 899999999999999996544 44567
Q ss_pred CCCCCEEecCCCcccccCCccCcCCCCCCEEEccCCcCcc---cC-CccccCCCCcCEEecccCcccccCCc---cccCC
Q 004268 90 LRDLLDLNLSNNILNGSIPLEFGNLKDLDQLRLQGNKLDG---LI-PSSIGNLTNLTYLDLSLNQLSGRLPQ---EVGNL 162 (764)
Q Consensus 90 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~---~~-~~~~~~l~~L~~L~L~~n~l~~~~~~---~~~~l 162 (764)
+++|++|+|++|.++++.+..|.++++|++|+|++|++.+ +. +..+..+++|++|+|++|+++.+... .+.++
T Consensus 144 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l 223 (310)
T 4glp_A 144 KPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAG 223 (310)
T ss_dssp CSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHT
T ss_pred ccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcC
Confidence 8999999999999998888999999999999999999864 22 23357899999999999999744321 35788
Q ss_pred CCCCeeecccCCCCCCCCCccccC---CCccEEEecCccCcCCcccccCCccccceeeccCcccccccCccccCCCCCCE
Q 004268 163 KNLKSLFLDNNHLSGPIPSTLYHL---NQLATLCLGYNKLVGPVTKEVGNMKNLDRLHLNGNNLTGSIPSTIGYLNLLDE 239 (764)
Q Consensus 163 ~~L~~L~L~~n~i~~~~~~~~~~l---~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 239 (764)
++|++|+|++|.+++..|..+..+ ++|++|+|++|+++.++...+ ++|++|+|++|+++++ |. +..+++|+.
T Consensus 224 ~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~---~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~ 298 (310)
T 4glp_A 224 VQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLEQVPKGLP---AKLRVLDLSSNRLNRA-PQ-PDELPEVDN 298 (310)
T ss_dssp CCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCCSCCSCCC---SCCSCEECCSCCCCSC-CC-TTSCCCCSC
T ss_pred CCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCCchhhhhc---CCCCEEECCCCcCCCC-ch-hhhCCCccE
Confidence 999999999999998767666666 699999999999997654432 7999999999999965 33 678899999
Q ss_pred EEccCCcccC
Q 004268 240 LHLSHNRLDG 249 (764)
Q Consensus 240 L~L~~n~l~~ 249 (764)
|+|++|.+++
T Consensus 299 L~L~~N~l~~ 308 (310)
T 4glp_A 299 LTLDGNPFLV 308 (310)
T ss_dssp EECSSTTTSC
T ss_pred EECcCCCCCC
Confidence 9999999974
No 345
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.89 E-value=1.8e-25 Score=240.28 Aligned_cols=254 Identities=19% Similarity=0.217 Sum_probs=136.4
Q ss_pred EccCCcCcccCCcccCCCCCCCEEecCCCcccccCC----ccCcCCCCCCEEEccCCcCc---ccCCccc-------cCC
Q 004268 73 DLSYNRLTGTIPSEIGSLRDLLDLNLSNNILNGSIP----LEFGNLKDLDQLRLQGNKLD---GLIPSSI-------GNL 138 (764)
Q Consensus 73 ~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~----~~~~~l~~L~~L~L~~n~l~---~~~~~~~-------~~l 138 (764)
.++...+. .++..+..+++|++|+|++|.++...+ ..|..+++|++|+|++|.+. +..|..+ ..+
T Consensus 15 ~l~~~~~~-~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~ 93 (386)
T 2ca6_A 15 AITTEDEK-SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKC 93 (386)
T ss_dssp SCCSHHHH-TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTC
T ss_pred CCCHHHHH-HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhC
Confidence 33444444 455677777888888888888875533 33667788888888776444 2223333 455
Q ss_pred CCcCEEecccCcccc----cCCccccCCCCCCeeecccCCCCCCCCCccccCCCccEEEecCccCcCCcccccCCc----
Q 004268 139 TNLTYLDLSLNQLSG----RLPQEVGNLKNLKSLFLDNNHLSGPIPSTLYHLNQLATLCLGYNKLVGPVTKEVGNM---- 210 (764)
Q Consensus 139 ~~L~~L~L~~n~l~~----~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l---- 210 (764)
++|++|+|++|.++. ..+..+.++++|++|+|++|.++...+..+.. .+..+
T Consensus 94 ~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~--------------------~l~~l~~~~ 153 (386)
T 2ca6_A 94 PKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIAR--------------------ALQELAVNK 153 (386)
T ss_dssp TTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHH--------------------HHHHHHHHH
T ss_pred CcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHH--------------------HHHHHhhhh
Confidence 666666666666654 23444555566666666666554221111111 11111
Q ss_pred -----cccceeeccCccccc-ccC---ccccCCCCCCEEEccCCcccC-----CCCcCCcCCCCCCeEEccCCccc----
Q 004268 211 -----KNLDRLHLNGNNLTG-SIP---STIGYLNLLDELHLSHNRLDG-----PIPPTIGNLTNLIALDLSSNQLS---- 272 (764)
Q Consensus 211 -----~~L~~L~L~~n~l~~-~~~---~~~~~l~~L~~L~L~~n~l~~-----~~~~~~~~l~~L~~L~L~~n~l~---- 272 (764)
++|++|++++|+++. ..+ ..+..+++|+.|+|++|.++. ..+..+..+++|+.|+|++|.++
T Consensus 154 ~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~ 233 (386)
T 2ca6_A 154 KAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGS 233 (386)
T ss_dssp HHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHH
T ss_pred hcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHH
Confidence 455555555555541 111 234455566666666665542 12224555666666666666663
Q ss_pred CCCCccccCCCCCCeEeccCccccCC----CCCCC--CCCCccceEEccCCcCcc----CCChhh-hcccccceeecccc
Q 004268 273 GLLPREVGNLKYLASLSLNGNILIGP----IPPTI--GYLTNLTYLNLGYNRLSS----SIPPEL-MNCSQLLNLVLSHN 341 (764)
Q Consensus 273 ~~~~~~~~~l~~L~~L~l~~n~l~~~----~~~~~--~~l~~L~~L~ls~N~l~~----~~~~~~-~~l~~L~~L~ls~N 341 (764)
...+..+..+++|+.|+|++|.+.+. ++..+ +.+++|++|+|++|.++. .+|..+ .++++|+.|++++|
T Consensus 234 ~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N 313 (386)
T 2ca6_A 234 SALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGN 313 (386)
T ss_dssp HHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTS
T ss_pred HHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCC
Confidence 23444555556666666666655432 22233 225666666666666664 244444 44566666666666
Q ss_pred ccccCC
Q 004268 342 SLSGSI 347 (764)
Q Consensus 342 ~l~~~~ 347 (764)
++++..
T Consensus 314 ~l~~~~ 319 (386)
T 2ca6_A 314 RFSEED 319 (386)
T ss_dssp BSCTTS
T ss_pred cCCcch
Confidence 666444
No 346
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.89 E-value=1.6e-25 Score=240.64 Aligned_cols=255 Identities=20% Similarity=0.198 Sum_probs=163.5
Q ss_pred EcCCCcCcccCCccccCCCCCCEEEccCCcCcccC----CcccCCCCCCCEEecCCCccc---ccCCcc-------CcCC
Q 004268 49 VLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTGTI----PSEIGSLRDLLDLNLSNNILN---GSIPLE-------FGNL 114 (764)
Q Consensus 49 ~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~----~~~~~~l~~L~~L~L~~n~l~---~~~~~~-------~~~l 114 (764)
.++...+. .++..+..+++|++|+|++|.|+... +..|..+++|++|+|++|.+. +..|.. |..+
T Consensus 15 ~l~~~~~~-~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~ 93 (386)
T 2ca6_A 15 AITTEDEK-SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKC 93 (386)
T ss_dssp SCCSHHHH-TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTC
T ss_pred CCCHHHHH-HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhC
Confidence 33444444 46677888999999999999998653 345889999999999997554 333433 4789
Q ss_pred CCCCEEEccCCcCcc----cCCccccCCCCcCEEecccCcccccCCccccC----C---------CCCCeeecccCCCCC
Q 004268 115 KDLDQLRLQGNKLDG----LIPSSIGNLTNLTYLDLSLNQLSGRLPQEVGN----L---------KNLKSLFLDNNHLSG 177 (764)
Q Consensus 115 ~~L~~L~L~~n~l~~----~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~----l---------~~L~~L~L~~n~i~~ 177 (764)
++|++|+|++|.++. ..+..+..+++|++|+|++|.++...+..+.. + ++|++|+|++|+++.
T Consensus 94 ~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~ 173 (386)
T 2ca6_A 94 PKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLEN 173 (386)
T ss_dssp TTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTG
T ss_pred CcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCc
Confidence 999999999999997 35667889999999999999997554444443 3 777777777777752
Q ss_pred C-CC---CccccCCCccEEEecCccCcCCcccccCCccccceeeccCcccccccCccccCCCCCCEEEccCCccc----C
Q 004268 178 P-IP---STLYHLNQLATLCLGYNKLVGPVTKEVGNMKNLDRLHLNGNNLTGSIPSTIGYLNLLDELHLSHNRLD----G 249 (764)
Q Consensus 178 ~-~~---~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~----~ 249 (764)
. .+ ..+..+++|++|++++|.+...... ...+..+..+++|+.|+|++|.++ .
T Consensus 174 ~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~-------------------~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~ 234 (386)
T 2ca6_A 174 GSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIE-------------------HLLLEGLAYCQELKVLDLQDNTFTHLGSS 234 (386)
T ss_dssp GGHHHHHHHHHHCTTCCEEECCSSCCCHHHHH-------------------HHHHTTGGGCTTCCEEECCSSCCHHHHHH
T ss_pred HHHHHHHHHHHhCCCcCEEECcCCCCCHhHHH-------------------HHHHHHhhcCCCccEEECcCCCCCcHHHH
Confidence 1 11 2334455555555555554411000 012224445555555555555553 2
Q ss_pred CCCcCCcCCCCCCeEEccCCcccCC----CCcccc--CCCCCCeEeccCccccC----CCCCCC-CCCCccceEEccCCc
Q 004268 250 PIPPTIGNLTNLIALDLSSNQLSGL----LPREVG--NLKYLASLSLNGNILIG----PIPPTI-GYLTNLTYLNLGYNR 318 (764)
Q Consensus 250 ~~~~~~~~l~~L~~L~L~~n~l~~~----~~~~~~--~l~~L~~L~l~~n~l~~----~~~~~~-~~l~~L~~L~ls~N~ 318 (764)
.++..+..+++|+.|+|++|.+++. .+..+. .+++|+.|+|++|.+.+ .+|..+ ..+++|++|+|++|+
T Consensus 235 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~ 314 (386)
T 2ca6_A 235 ALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNR 314 (386)
T ss_dssp HHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSB
T ss_pred HHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCc
Confidence 3344555566666666666666543 233342 26667777777776665 244444 446777888888887
Q ss_pred CccCC
Q 004268 319 LSSSI 323 (764)
Q Consensus 319 l~~~~ 323 (764)
+++..
T Consensus 315 l~~~~ 319 (386)
T 2ca6_A 315 FSEED 319 (386)
T ss_dssp SCTTS
T ss_pred CCcch
Confidence 77544
No 347
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.89 E-value=2.6e-24 Score=226.79 Aligned_cols=253 Identities=21% Similarity=0.240 Sum_probs=128.2
Q ss_pred CcEEEcCCCcCcccCCccccCC--CCCCEEEccCCcCcccCCcccCCCCCCCEEecCCCccccc-CCccCcCCCCCCEEE
Q 004268 45 LEKLVLSHNSLTGRIPSEIGAL--SRLKVLDLSYNRLTGTIPSEIGSLRDLLDLNLSNNILNGS-IPLEFGNLKDLDQLR 121 (764)
Q Consensus 45 L~~L~Ls~n~i~~~~~~~~~~l--~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~~~~~~l~~L~~L~ 121 (764)
++.|++++|.+. +..+..+ ++++.|++++|.+.+..+. +..+++|++|+|++|.++.. .+..+..+++|++|+
T Consensus 49 ~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~ 124 (336)
T 2ast_B 49 WQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLS 124 (336)
T ss_dssp SSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEE
T ss_pred heeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEe
Confidence 555666665554 2334444 5566666666665543333 33455566666666555433 344455555555555
Q ss_pred ccCCcCcccCCccccCCCCcCEEecccC-ccccc-CCccccCCCCCCeeecccC-CCCCCCCCccccCCCccEEEecCcc
Q 004268 122 LQGNKLDGLIPSSIGNLTNLTYLDLSLN-QLSGR-LPQEVGNLKNLKSLFLDNN-HLSGPIPSTLYHLNQLATLCLGYNK 198 (764)
Q Consensus 122 L~~n~l~~~~~~~~~~l~~L~~L~L~~n-~l~~~-~~~~~~~l~~L~~L~L~~n-~i~~~~~~~~~~l~~L~~L~l~~n~ 198 (764)
|++|.+++..+..+..+++|++|+|++| .+++. .+..+.++++|++|++++| .+++..
T Consensus 125 L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~------------------- 185 (336)
T 2ast_B 125 LEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKH------------------- 185 (336)
T ss_dssp CTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHH-------------------
T ss_pred CcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHH-------------------
Confidence 5555555444445555555555555555 34421 2333444555555555555 443210
Q ss_pred CcCCcccccCCcc-ccceeeccCc--ccc-cccCccccCCCCCCEEEccCCc-ccCCCCcCCcCCCCCCeEEccCCc-cc
Q 004268 199 LVGPVTKEVGNMK-NLDRLHLNGN--NLT-GSIPSTIGYLNLLDELHLSHNR-LDGPIPPTIGNLTNLIALDLSSNQ-LS 272 (764)
Q Consensus 199 i~~~~~~~~~~l~-~L~~L~L~~n--~l~-~~~~~~~~~l~~L~~L~L~~n~-l~~~~~~~~~~l~~L~~L~L~~n~-l~ 272 (764)
.+..+..++ +|++|++++| .++ +..+..+..+++|+.|++++|. +++..+..+..+++|+.|++++|. +.
T Consensus 186 ----~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~ 261 (336)
T 2ast_B 186 ----VQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDII 261 (336)
T ss_dssp ----HHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCC
T ss_pred ----HHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCC
Confidence 122233444 4555555555 222 2233344555666666666665 444444555666666666666663 22
Q ss_pred CCCCccccCCCCCCeEeccCccccCCCCCCCCCC-CccceEEccCCcCccCCChhhh
Q 004268 273 GLLPREVGNLKYLASLSLNGNILIGPIPPTIGYL-TNLTYLNLGYNRLSSSIPPELM 328 (764)
Q Consensus 273 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l-~~L~~L~ls~N~l~~~~~~~~~ 328 (764)
......+..+++|+.|++++| +.. ..+..+ .+|+.|++++|++++..|..+.
T Consensus 262 ~~~~~~l~~~~~L~~L~l~~~-i~~---~~~~~l~~~l~~L~l~~n~l~~~~~~~~~ 314 (336)
T 2ast_B 262 PETLLELGEIPTLKTLQVFGI-VPD---GTLQLLKEALPHLQINCSHFTTIARPTIG 314 (336)
T ss_dssp GGGGGGGGGCTTCCEEECTTS-SCT---TCHHHHHHHSTTSEESCCCSCCTTCSSCS
T ss_pred HHHHHHHhcCCCCCEEeccCc-cCH---HHHHHHHhhCcceEEecccCccccCCccc
Confidence 222224556666666666666 221 233333 2355566677777666555444
No 348
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.88 E-value=3.1e-24 Score=226.20 Aligned_cols=198 Identities=18% Similarity=0.219 Sum_probs=151.8
Q ss_pred CeeEEEeCCCCccccCCccccCC--CCCcEEEcCCCcCcccCCccccCCCCCCEEEccCCcCccc-CCcccCCCCCCCEE
Q 004268 20 NLVTFRIWGTLLSGRMPSEIGAL--SKLEKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTGT-IPSEIGSLRDLLDL 96 (764)
Q Consensus 20 ~l~~L~l~~~~~~~~~~~~~~~l--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~-~~~~~~~l~~L~~L 96 (764)
.++.|+++++.+. +..+..+ ++++.|++++|.+++..+. +..+++|++|+|++|.++.. .+..+..+++|++|
T Consensus 48 ~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L 123 (336)
T 2ast_B 48 LWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNL 123 (336)
T ss_dssp TSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEE
T ss_pred hheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEE
Confidence 3788999999876 4667777 8999999999999977665 56789999999999999855 77889999999999
Q ss_pred ecCCCcccccCCccCcCCCCCCEEEccCC-cCccc-CCccccCCCCcCEEecccC-ccccc-CCccccCCC-CCCeeecc
Q 004268 97 NLSNNILNGSIPLEFGNLKDLDQLRLQGN-KLDGL-IPSSIGNLTNLTYLDLSLN-QLSGR-LPQEVGNLK-NLKSLFLD 171 (764)
Q Consensus 97 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~n-~l~~~-~~~~~~~l~~L~~L~L~~n-~l~~~-~~~~~~~l~-~L~~L~L~ 171 (764)
+|++|.+++..+..|..+++|++|+|++| .+++. .+..+.++++|++|++++| .+++. .+..+..++ +|++|+++
T Consensus 124 ~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~ 203 (336)
T 2ast_B 124 SLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLS 203 (336)
T ss_dssp ECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECC
T ss_pred eCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeC
Confidence 99999998778888999999999999999 67752 4566888999999999999 88854 456678888 99999999
Q ss_pred cCC--CC-CCCCCccccCCCccEEEecCcc-CcCCcccccCCccccceeeccCc
Q 004268 172 NNH--LS-GPIPSTLYHLNQLATLCLGYNK-LVGPVTKEVGNMKNLDRLHLNGN 221 (764)
Q Consensus 172 ~n~--i~-~~~~~~~~~l~~L~~L~l~~n~-i~~~~~~~~~~l~~L~~L~L~~n 221 (764)
+|. ++ ...+..+..+++|++|++++|. ++......+..+++|++|++++|
T Consensus 204 ~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~ 257 (336)
T 2ast_B 204 GYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRC 257 (336)
T ss_dssp SCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTC
T ss_pred CCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCC
Confidence 984 43 1222344455566666666555 33333334444455555555544
No 349
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.88 E-value=6.9e-23 Score=208.45 Aligned_cols=166 Identities=15% Similarity=0.141 Sum_probs=126.8
Q ss_pred HHHHhhcCCcceeeeecCceeEEEEEECCCCEEEEEEccCCCCCcH---------------HHHHHHHHHHHHHHhcCCC
Q 004268 503 MIEATEDFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEP---------------AFLESFQTEARLLSQIRHR 567 (764)
Q Consensus 503 ~~~~~~~y~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~---------------~~~~~~~~E~~~l~~l~hp 567 (764)
+......|.+.+.||+|+||.||+|.+.+|+.||+|++........ .....+.+|++++++++|
T Consensus 85 ~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~~- 163 (282)
T 1zar_A 85 LVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQG- 163 (282)
T ss_dssp HHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTT-
T ss_pred HHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhccC-
Confidence 3344556778899999999999999887899999999865332110 134678999999999984
Q ss_pred ceeeEeeEEeeCCEEEEEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeec
Q 004268 568 NIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLN 647 (764)
Q Consensus 568 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~ 647 (764)
+++.+++.. +..|+||||++|++|.+ +.. .....++.|++.||+||| ++||+||||||+||+++
T Consensus 164 --~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~---------~~~~~i~~qi~~~l~~lH---~~giiHrDlkp~NILl~ 227 (282)
T 1zar_A 164 --LAVPKVYAW-EGNAVLMELIDAKELYR-VRV---------ENPDEVLDMILEEVAKFY---HRGIVHGDLSQYNVLVS 227 (282)
T ss_dssp --SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC---------SCHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEEE
T ss_pred --CCcCeEEec-cceEEEEEecCCCcHHH-cch---------hhHHHHHHHHHHHHHHHH---HCCCEeCCCCHHHEEEE
Confidence 555554433 44699999999999988 431 123469999999999999 89999999999999999
Q ss_pred CCCCEEEeeeccccccCCCCCCceeccccccccccccccc----------CCCCccchHHHH
Q 004268 648 SNLEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYT----------MAVTEKCDVYSF 699 (764)
Q Consensus 648 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~----------~~~~~~~Diwsl 699 (764)
++.+||+|||+|+. +..+.|||.+.+ ..|+..+|+|.+
T Consensus 228 -~~~vkl~DFG~a~~-------------~~~~~a~e~l~rdv~~i~~~f~~~~~~~~~~~~~ 275 (282)
T 1zar_A 228 -EEGIWIIDFPQSVE-------------VGEEGWREILERDVRNIITYFSRTYRTEKDINSA 275 (282)
T ss_dssp -TTEEEECCCTTCEE-------------TTSTTHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
T ss_pred -CCcEEEEECCCCeE-------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCChHHH
Confidence 99999999999963 335688998654 345555666653
No 350
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.86 E-value=3.2e-21 Score=187.73 Aligned_cols=180 Identities=25% Similarity=0.241 Sum_probs=108.5
Q ss_pred cEEEcCCCcCcccCCccccCCCCCCEEEccCCcCcccCCcccCCCCCCCEEecCCCcccccCCccCcCCCCCCEEEccCC
Q 004268 46 EKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLDLNLSNNILNGSIPLEFGNLKDLDQLRLQGN 125 (764)
Q Consensus 46 ~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 125 (764)
+.++++++.++. +|..+ .++|++|+|++|++++..+..|..+++|++|+|++|.++.+.+..|.++++|++|+|++|
T Consensus 10 ~~v~c~~~~l~~-~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 86 (208)
T 2o6s_A 10 TTVECYSQGRTS-VPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTN 86 (208)
T ss_dssp TEEECCSSCCSS-CCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCccC-CCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCC
Confidence 345555555553 23222 235666666666666554555566666666666666666555555666666666666666
Q ss_pred cCcccCCccccCCCCcCEEecccCcccccCCccccCCCCCCeeecccCCCCCCCCCccccCCCccEEEecCccCcCCccc
Q 004268 126 KLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNLKSLFLDNNHLSGPIPSTLYHLNQLATLCLGYNKLVGPVTK 205 (764)
Q Consensus 126 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~ 205 (764)
+++++++..|.++++|++|+|++|+++++.+..|.++++|++|++++|.++++.+..+..+++|+.|++++|.+.
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~----- 161 (208)
T 2o6s_A 87 QLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWD----- 161 (208)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBC-----
T ss_pred cCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCee-----
Confidence 666555555666666666666666666555555666666666666666666555555666666666666666544
Q ss_pred ccCCccccceeeccCcccccccCccccCCC
Q 004268 206 EVGNMKNLDRLHLNGNNLTGSIPSTIGYLN 235 (764)
Q Consensus 206 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~ 235 (764)
..+++|++|+++.|++++.+|..++.++
T Consensus 162 --~~~~~l~~L~~~~n~~~g~ip~~~~~l~ 189 (208)
T 2o6s_A 162 --CTCPGIRYLSEWINKHSGVVRNSAGSVA 189 (208)
T ss_dssp --CCTTTTHHHHHHHHHCTTTBBCTTSSBC
T ss_pred --cCCCCHHHHHHHHHhCCceeeccCcccc
Confidence 2345677777777777776666555443
No 351
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.86 E-value=4.9e-21 Score=186.42 Aligned_cols=182 Identities=26% Similarity=0.256 Sum_probs=154.3
Q ss_pred eeEEEeCCCCccccCCccccCCCCCcEEEcCCCcCcccCCccccCCCCCCEEEccCCcCcccCCcccCCCCCCCEEecCC
Q 004268 21 LVTFRIWGTLLSGRMPSEIGALSKLEKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLDLNLSN 100 (764)
Q Consensus 21 l~~L~l~~~~~~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~ 100 (764)
-+.+++.+++++ .+|..+ .++|++|++++|+++++.+..|..+++|++|+|++|+++...+..|..+++|++|+|++
T Consensus 9 ~~~v~c~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~ 85 (208)
T 2o6s_A 9 GTTVECYSQGRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLST 85 (208)
T ss_dssp TTEEECCSSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCcc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCC
Confidence 356788888886 455544 45899999999999987777889999999999999999977777788999999999999
Q ss_pred CcccccCCccCcCCCCCCEEEccCCcCcccCCccccCCCCcCEEecccCcccccCCccccCCCCCCeeecccCCCCCCCC
Q 004268 101 NILNGSIPLEFGNLKDLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNLKSLFLDNNHLSGPIP 180 (764)
Q Consensus 101 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~ 180 (764)
|.++++.+..|.++++|++|+|++|+++++.+..|.++++|++|+|++|+++++.+..|.++++|+.|++++|.+.
T Consensus 86 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~---- 161 (208)
T 2o6s_A 86 NQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWD---- 161 (208)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBC----
T ss_pred CcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCee----
Confidence 9999887778899999999999999999888888899999999999999999888878899999999999999775
Q ss_pred CccccCCCccEEEecCccCcCCcccccCCccc
Q 004268 181 STLYHLNQLATLCLGYNKLVGPVTKEVGNMKN 212 (764)
Q Consensus 181 ~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~ 212 (764)
..+++|+.|+++.|++++..+..+..++.
T Consensus 162 ---~~~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 162 ---CTCPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp ---CCTTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred ---cCCCCHHHHHHHHHhCCceeeccCccccC
Confidence 34578889999999998777776665544
No 352
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.85 E-value=8.3e-22 Score=206.46 Aligned_cols=283 Identities=16% Similarity=0.114 Sum_probs=172.8
Q ss_pred CCCCcEEEcCCCcCcccCCccccC-CCCCCEEEccCCcCc--ccCCcccCCCCCCCEEecCCCcccccCCccCcC-----
Q 004268 42 LSKLEKLVLSHNSLTGRIPSEIGA-LSRLKVLDLSYNRLT--GTIPSEIGSLRDLLDLNLSNNILNGSIPLEFGN----- 113 (764)
Q Consensus 42 l~~L~~L~Ls~n~i~~~~~~~~~~-l~~L~~L~L~~n~i~--~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~----- 113 (764)
+.+++.|.++++ +.......+.. +++|++|||++|+|. ......+ +.+..+.+..|. +.+.+|.+
T Consensus 24 ~~~l~~L~l~g~-i~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~~~~---~~~~~~~~~~~~---I~~~aF~~~~~~~ 96 (329)
T 3sb4_A 24 ANSITHLTLTGK-LNAEDFRHLRDEFPSLKVLDISNAEIKMYSGKAGTY---PNGKFYIYMANF---VPAYAFSNVVNGV 96 (329)
T ss_dssp HHHCSEEEEEEE-ECHHHHHHHHHSCTTCCEEEEEEEEECCEEESSSSS---GGGCCEEECTTE---ECTTTTEEEETTE
T ss_pred hCceeEEEEecc-ccHHHHHHHHHhhccCeEEecCcceeEEecCccccc---cccccccccccc---cCHHHhccccccc
Confidence 456677777654 21111122333 677888888888777 3222222 234556666653 45567777
Q ss_pred ---CCCCCEEEccCCcCcccCCccccCCCCcCEEecccCcccccCCccccCCCCCCeeecccC----CCCCCCCCccccC
Q 004268 114 ---LKDLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNLKSLFLDNN----HLSGPIPSTLYHL 186 (764)
Q Consensus 114 ---l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n----~i~~~~~~~~~~l 186 (764)
+++|++|+|.+ .++.+.+.+|.+|++|+.|++++|.+..+.+.+|.++.++..+.+..+ ....+...+|.++
T Consensus 97 ~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~ 175 (329)
T 3sb4_A 97 TKGKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEG 175 (329)
T ss_dssp EEECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEES
T ss_pred ccccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccc
Confidence 88888888887 777777778888888888888888887777888887777777766553 2233555667777
Q ss_pred CCcc-EEEecCccCcCCccccc---CCccccceeeccCcccccccCccc-cCCCCCCEEEccCCcccCCCCcCCcCCCCC
Q 004268 187 NQLA-TLCLGYNKLVGPVTKEV---GNMKNLDRLHLNGNNLTGSIPSTI-GYLNLLDELHLSHNRLDGPIPPTIGNLTNL 261 (764)
Q Consensus 187 ~~L~-~L~l~~n~i~~~~~~~~---~~l~~L~~L~L~~n~l~~~~~~~~-~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 261 (764)
..|+ .+.+.... .+....+ ....++..+.+.++-.. .....+ ..+++|+.|+|++|.++.+...+|.++++|
T Consensus 176 ~~L~~~i~~~~~~--~l~~~~~~~~~~~~~~~~l~~~~~l~~-~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L 252 (329)
T 3sb4_A 176 EPLETTIQVGAMG--KLEDEIMKAGLQPRDINFLTIEGKLDN-ADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYL 252 (329)
T ss_dssp CCCEEEEEECTTC--CHHHHHHHTTCCGGGCSEEEEEECCCH-HHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTC
T ss_pred cccceeEEecCCC--cHHHHHhhcccCccccceEEEeeeecH-HHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCC
Confidence 7776 45544322 1111111 12455566665544222 111111 235677777777777776666677777777
Q ss_pred CeEEccCCcccCCCCccccCCCCCC-eEeccCccccCCCCCCCCCCCccceEEccCCcCccCCChhhhcccccceee
Q 004268 262 IALDLSSNQLSGLLPREVGNLKYLA-SLSLNGNILIGPIPPTIGYLTNLTYLNLGYNRLSSSIPPELMNCSQLLNLV 337 (764)
Q Consensus 262 ~~L~L~~n~l~~~~~~~~~~l~~L~-~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ 337 (764)
+.|+|.+| +..+...+|.++.+|+ .+++.+ .++.+.+.+|..+++|+.|++++|+++.+.+.+|.++++|+.|+
T Consensus 253 ~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 253 LKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp CEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEE
T ss_pred CEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhc
Confidence 77777776 6556666677777776 677666 55555556666666666666666666655556666666666655
No 353
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.84 E-value=9.2e-21 Score=194.38 Aligned_cols=187 Identities=24% Similarity=0.331 Sum_probs=114.7
Q ss_pred EEEeCCCCccccCCccccCCCCCcEEEcCCCcCcccCCccccCCCCCCEEEccCCcCcccCCcccCCCCCCCEEecCCCc
Q 004268 23 TFRIWGTLLSGRMPSEIGALSKLEKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLDLNLSNNI 102 (764)
Q Consensus 23 ~L~l~~~~~~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~ 102 (764)
.+.+.++.+++. ..+..+++|++|++++|.+++. + .+..+++|++|+|++|++++..+ +..+++|++|+|++|.
T Consensus 28 ~~~l~~~~~~~~--~~~~~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~ 101 (291)
T 1h6t_A 28 KDNLKKKSVTDA--VTQNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENK 101 (291)
T ss_dssp HHHTTCSCTTSE--ECHHHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSC
T ss_pred HHHhcCCCcccc--cchhhcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCc
Confidence 334445544432 2234556666666666666643 2 36666666666666666664332 6666666666666666
Q ss_pred ccccCCccCcCCCCCCEEEccCCcCcccCCccccCCCCcCEEecccCcccccCCccccCCCCCCeeecccCCCCCCCCCc
Q 004268 103 LNGSIPLEFGNLKDLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNLKSLFLDNNHLSGPIPST 182 (764)
Q Consensus 103 l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~ 182 (764)
++.+ ..+..+++|++|+|++|+++++ ..+..+++|++|++++|+++++ ..+..+++|++|++++|.++++.+
T Consensus 102 l~~~--~~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~-- 173 (291)
T 1h6t_A 102 VKDL--SSLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP-- 173 (291)
T ss_dssp CCCG--GGGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--
T ss_pred CCCC--hhhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--
Confidence 6643 2366666666666666666654 3566666666666666666654 456666667777777666665443
Q ss_pred cccCCCccEEEecCccCcCCcccccCCccccceeeccCccccc
Q 004268 183 LYHLNQLATLCLGYNKLVGPVTKEVGNMKNLDRLHLNGNNLTG 225 (764)
Q Consensus 183 ~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~ 225 (764)
+..+++|+.|++++|.++.+. .+..+++|+.|++++|.++.
T Consensus 174 l~~l~~L~~L~L~~N~i~~l~--~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 174 LAGLTKLQNLYLSKNHISDLR--ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp GTTCTTCCEEECCSSCCCBCG--GGTTCTTCSEEEEEEEEEEC
T ss_pred hcCCCccCEEECCCCcCCCCh--hhccCCCCCEEECcCCcccC
Confidence 666666777777777666542 36667777777777777664
No 354
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.84 E-value=1.4e-20 Score=208.93 Aligned_cols=194 Identities=22% Similarity=0.233 Sum_probs=91.1
Q ss_pred CeeEEEeCCCCccccCCccccCCCCCcEEEcCCCcCcccCCccccCCCCCCEEEccCCcCcccCCcccCCCCCCCEEecC
Q 004268 20 NLVTFRIWGTLLSGRMPSEIGALSKLEKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLDLNLS 99 (764)
Q Consensus 20 ~l~~L~l~~~~~~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~ 99 (764)
+++.|++++|++++ +|..+. ++|++|+|++|+|+ .+| ..+++|++|+|++|+|++ +|. +.. +|++|+|+
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls 128 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVD 128 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECC
T ss_pred CccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECC
Confidence 55555555555543 343332 44555555555555 233 223455555555555553 333 332 45555555
Q ss_pred CCcccccCCccCcCCCCCCEEEccCCcCcccCCccccCCCCcCEEecccCcccccCCccccCCCCCCeeecccCCCCCCC
Q 004268 100 NNILNGSIPLEFGNLKDLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNLKSLFLDNNHLSGPI 179 (764)
Q Consensus 100 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~ 179 (764)
+|.++++.+ .+++|+.|+|++|.++++++ .+++|++|+|++|+++++++ |. ++|+.|+|++|.|+.+.
T Consensus 129 ~N~l~~lp~----~l~~L~~L~Ls~N~l~~lp~----~l~~L~~L~Ls~N~L~~lp~--l~--~~L~~L~Ls~N~L~~lp 196 (571)
T 3cvr_A 129 NNQLTMLPE----LPALLEYINADNNQLTMLPE----LPTSLEVLSVRNNQLTFLPE--LP--ESLEALDVSTNLLESLP 196 (571)
T ss_dssp SSCCSCCCC----CCTTCCEEECCSSCCSCCCC----CCTTCCEEECCSSCCSCCCC--CC--TTCCEEECCSSCCSSCC
T ss_pred CCcCCCCCC----cCccccEEeCCCCccCcCCC----cCCCcCEEECCCCCCCCcch--hh--CCCCEEECcCCCCCchh
Confidence 555543222 34455555555555544322 23445555555555543222 33 44445555544444222
Q ss_pred CCccccCCCccEEEecCccCcCCcccccCCccccceeeccCcccccccCccccCCCCCCEEEccCCcccCCCCcCCcCC
Q 004268 180 PSTLYHLNQLATLCLGYNKLVGPVTKEVGNMKNLDRLHLNGNNLTGSIPSTIGYLNLLDELHLSHNRLDGPIPPTIGNL 258 (764)
Q Consensus 180 ~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 258 (764)
. +.. +| +...+.|+.|+|++|+++. +|..+..+++|+.|+|++|.+++..|..+..+
T Consensus 197 ~--~~~--~L-----------------~~~~~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l 253 (571)
T 3cvr_A 197 A--VPV--RN-----------------HHSEETEIFFRCRENRITH-IPENILSLDPTCTIILEDNPLSSRIRESLSQQ 253 (571)
T ss_dssp C--CC---------------------------CCEEEECCSSCCCC-CCGGGGGSCTTEEEECCSSSCCHHHHHHHHHH
T ss_pred h--HHH--hh-----------------hcccccceEEecCCCccee-cCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHh
Confidence 1 211 22 0111222666777776663 44445556777777777777766555555443
No 355
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.84 E-value=2.5e-20 Score=182.64 Aligned_cols=133 Identities=27% Similarity=0.348 Sum_probs=65.8
Q ss_pred CCCEEEccCCcCcccCCcccCCCCCCCEEecCCCcccccCCccCcCCCCCCEEEccCCcCcccCCccccCCCCcCEEecc
Q 004268 68 RLKVLDLSYNRLTGTIPSEIGSLRDLLDLNLSNNILNGSIPLEFGNLKDLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLS 147 (764)
Q Consensus 68 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 147 (764)
+|++|+|++|+|+...+..|..+++|++|+|++|.++++.+.+|.++++|++|+|++|+++.+++..|.++++|++|+|+
T Consensus 33 ~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~ 112 (220)
T 2v9t_B 33 TITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLN 112 (220)
T ss_dssp TCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECC
Confidence 44444444444444444444444444444554444444444444445555555555555544444444445555555555
Q ss_pred cCcccccCCccccCCCCCCeeecccCCCCCCCCCccccCCCccEEEecCccCc
Q 004268 148 LNQLSGRLPQEVGNLKNLKSLFLDNNHLSGPIPSTLYHLNQLATLCLGYNKLV 200 (764)
Q Consensus 148 ~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~ 200 (764)
+|+++++.+..|.++++|+.|+|++|.++++.+..|..+++|+.|+|++|.+.
T Consensus 113 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 113 ANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFI 165 (220)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEE
T ss_pred CCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcC
Confidence 55555444444555555555555555555444444555555555555555443
No 356
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.84 E-value=1.6e-20 Score=199.26 Aligned_cols=175 Identities=27% Similarity=0.251 Sum_probs=89.1
Q ss_pred EEEcCCCcCcccCCccccCCCCCCEEEccCCcCcccCCcccC-CCCCCCEEecCCCcccccCCccCcCCCCCCEEEccCC
Q 004268 47 KLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTGTIPSEIG-SLRDLLDLNLSNNILNGSIPLEFGNLKDLDQLRLQGN 125 (764)
Q Consensus 47 ~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~-~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 125 (764)
.+++++++++. +|..+. +.++.|+|++|+|++..+..|. .+++|++|+|++|.|+.+.+.+|.++++|++|+|++|
T Consensus 22 ~l~c~~~~l~~-iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 98 (361)
T 2xot_A 22 ILSCSKQQLPN-VPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSN 98 (361)
T ss_dssp EEECCSSCCSS-CCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EEEeCCCCcCc-cCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCC
Confidence 45555555552 333332 2355555555555544444444 5555555555555555555555555555555555555
Q ss_pred cCcccCCccccCCCCcCEEecccCcccccCCccccCCCCCCeeecccCCCCCCCCCcc---ccCCCccEEEecCccCcCC
Q 004268 126 KLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNLKSLFLDNNHLSGPIPSTL---YHLNQLATLCLGYNKLVGP 202 (764)
Q Consensus 126 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~---~~l~~L~~L~l~~n~i~~~ 202 (764)
+|+.+.+..|.++++|++|+|++|+|+.+.+..|.++++|+.|+|++|.++.+....| ..+++|+.|+|++|++..+
T Consensus 99 ~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~l 178 (361)
T 2xot_A 99 HLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKL 178 (361)
T ss_dssp CCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCCC
T ss_pred cCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCcc
Confidence 5555555555555555555555555555555555555555555555555554443333 3345555555555555544
Q ss_pred cccccCCccc--cceeeccCcccc
Q 004268 203 VTKEVGNMKN--LDRLHLNGNNLT 224 (764)
Q Consensus 203 ~~~~~~~l~~--L~~L~L~~n~l~ 224 (764)
....+..++. ++.|+|++|.+.
T Consensus 179 ~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 179 PLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp CHHHHHHSCHHHHTTEECCSSCEE
T ss_pred CHHHhhhccHhhcceEEecCCCcc
Confidence 4444444443 244555555443
No 357
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.84 E-value=1.2e-20 Score=200.06 Aligned_cols=179 Identities=26% Similarity=0.201 Sum_probs=162.2
Q ss_pred CeeEEEeCCCCccccCCccccCCCCCcEEEcCCCcCcccCCcccc-CCCCCCEEEccCCcCcccCCcccCCCCCCCEEec
Q 004268 20 NLVTFRIWGTLLSGRMPSEIGALSKLEKLVLSHNSLTGRIPSEIG-ALSRLKVLDLSYNRLTGTIPSEIGSLRDLLDLNL 98 (764)
Q Consensus 20 ~l~~L~l~~~~~~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~-~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L 98 (764)
.-+++++++++++ .+|..+. ..++.|+|++|+|+++.+..|. ++++|++|+|++|+|+...+.+|..+++|++|+|
T Consensus 19 ~~~~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~L 95 (361)
T 2xot_A 19 ASNILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDL 95 (361)
T ss_dssp ETTEEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCEEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEEC
Confidence 4568999999998 5777664 4699999999999998888898 9999999999999999888889999999999999
Q ss_pred CCCcccccCCccCcCCCCCCEEEccCCcCcccCCccccCCCCcCEEecccCcccccCCccc---cCCCCCCeeecccCCC
Q 004268 99 SNNILNGSIPLEFGNLKDLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEV---GNLKNLKSLFLDNNHL 175 (764)
Q Consensus 99 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~---~~l~~L~~L~L~~n~i 175 (764)
++|.|+.+.+..|.++++|++|+|++|+|..+.+..|.++++|++|+|++|+++.+.+..| ..+++|+.|+|++|+|
T Consensus 96 s~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l 175 (361)
T 2xot_A 96 SSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKL 175 (361)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCC
T ss_pred CCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCC
Confidence 9999999988899999999999999999999999999999999999999999998877777 5799999999999999
Q ss_pred CCCCCCccccCCC--ccEEEecCccCcC
Q 004268 176 SGPIPSTLYHLNQ--LATLCLGYNKLVG 201 (764)
Q Consensus 176 ~~~~~~~~~~l~~--L~~L~l~~n~i~~ 201 (764)
+.+.+..+..++. ++.|+|++|.+..
T Consensus 176 ~~l~~~~~~~l~~~~l~~l~l~~N~~~C 203 (361)
T 2xot_A 176 KKLPLTDLQKLPAWVKNGLYLHNNPLEC 203 (361)
T ss_dssp CCCCHHHHHHSCHHHHTTEECCSSCEEC
T ss_pred CccCHHHhhhccHhhcceEEecCCCccC
Confidence 9888788888887 4889999999873
No 358
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.83 E-value=4.7e-20 Score=180.68 Aligned_cols=153 Identities=24% Similarity=0.325 Sum_probs=128.7
Q ss_pred eeEEEeCCCCccccCCccccCCCCCcEEEcCCCcCcccCCccccCCCCCCEEEccCCcCcccCCcccCCCCCCCEEecCC
Q 004268 21 LVTFRIWGTLLSGRMPSEIGALSKLEKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLDLNLSN 100 (764)
Q Consensus 21 l~~L~l~~~~~~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~ 100 (764)
-+.+++.+++++ .+|..+. +++++|+|++|+|+++.+..|..+++|++|+|++|+|++..|.+|.++++|++|+|++
T Consensus 13 ~~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~ 89 (220)
T 2v9t_B 13 NNIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYG 89 (220)
T ss_dssp TTEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCS
T ss_pred CCEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCC
Confidence 357888888887 5666554 6888888888888887777888888888888888888877788888888888888888
Q ss_pred CcccccCCccCcCCCCCCEEEccCCcCcccCCccccCCCCcCEEecccCcccccCCccccCCCCCCeeecccCCCC
Q 004268 101 NILNGSIPLEFGNLKDLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNLKSLFLDNNHLS 176 (764)
Q Consensus 101 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~ 176 (764)
|.|+.+.+..|.++++|++|+|++|+++++.+..|.++++|++|+|++|+++++.+..|..+++|+.|+|++|.+.
T Consensus 90 N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 90 NKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFI 165 (220)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEE
T ss_pred CcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcC
Confidence 8888777777888888888888888888888888888888888888888888888778888888888888888875
No 359
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.83 E-value=1.4e-20 Score=192.96 Aligned_cols=165 Identities=29% Similarity=0.386 Sum_probs=97.0
Q ss_pred cEEEcCCCcCcccCCccccCCCCCCEEEccCCcCcccCCcccCCCCCCCEEecCCCcccccCCccCcCCCCCCEEEccCC
Q 004268 46 EKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLDLNLSNNILNGSIPLEFGNLKDLDQLRLQGN 125 (764)
Q Consensus 46 ~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 125 (764)
..+.+..+.+++..+ +..+++|++|++++|.++.. + .+..+++|++|+|++|.++++.+ +.++++|++|+|++|
T Consensus 27 ~~~~l~~~~~~~~~~--~~~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n 100 (291)
T 1h6t_A 27 IKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDEN 100 (291)
T ss_dssp HHHHTTCSCTTSEEC--HHHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSS
T ss_pred HHHHhcCCCcccccc--hhhcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCC
Confidence 344555555554322 45566777777777777643 2 36667777777777777765443 666777777777777
Q ss_pred cCcccCCccccCCCCcCEEecccCcccccCCccccCCCCCCeeecccCCCCCCCCCccccCCCccEEEecCccCcCCccc
Q 004268 126 KLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNLKSLFLDNNHLSGPIPSTLYHLNQLATLCLGYNKLVGPVTK 205 (764)
Q Consensus 126 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~ 205 (764)
.++++ ..+..+++|++|+|++|+++++ ..+..+++|+.|++++|.++++ ..+..+++|+.|++++|++..+.+
T Consensus 101 ~l~~~--~~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~- 173 (291)
T 1h6t_A 101 KVKDL--SSLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP- 173 (291)
T ss_dssp CCCCG--GGGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG-
T ss_pred cCCCC--hhhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh-
Confidence 77654 2366666777777777766643 3456666666666666666543 345555555555555555544332
Q ss_pred ccCCccccceeeccCcccc
Q 004268 206 EVGNMKNLDRLHLNGNNLT 224 (764)
Q Consensus 206 ~~~~l~~L~~L~L~~n~l~ 224 (764)
+..+++|++|++++|.++
T Consensus 174 -l~~l~~L~~L~L~~N~i~ 191 (291)
T 1h6t_A 174 -LAGLTKLQNLYLSKNHIS 191 (291)
T ss_dssp -GTTCTTCCEEECCSSCCC
T ss_pred -hcCCCccCEEECCCCcCC
Confidence 444444444444444444
No 360
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.83 E-value=5.4e-20 Score=204.18 Aligned_cols=189 Identities=24% Similarity=0.314 Sum_probs=105.7
Q ss_pred CCCEEEccCCcCcccCCccccCCCCcCEEecccCcccccCCccccCCCCCCeeecccCCCCCCCCCccccCCCccEEEec
Q 004268 116 DLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNLKSLFLDNNHLSGPIPSTLYHLNQLATLCLG 195 (764)
Q Consensus 116 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~ 195 (764)
+|+.|+|++|.++++++.. .++|++|+|++|+|+.+ | ..+++|++|+|++|.++++.. +.. +|+.|+|+
T Consensus 60 ~L~~L~Ls~n~L~~lp~~l---~~~L~~L~Ls~N~l~~i-p---~~l~~L~~L~Ls~N~l~~ip~--l~~--~L~~L~Ls 128 (571)
T 3cvr_A 60 QFSELQLNRLNLSSLPDNL---PPQITVLEITQNALISL-P---ELPASLEYLDACDNRLSTLPE--LPA--SLKHLDVD 128 (571)
T ss_dssp TCSEEECCSSCCSCCCSCC---CTTCSEEECCSSCCSCC-C---CCCTTCCEEECCSSCCSCCCC--CCT--TCCEEECC
T ss_pred CccEEEeCCCCCCccCHhH---cCCCCEEECcCCCCccc-c---cccCCCCEEEccCCCCCCcch--hhc--CCCEEECC
Confidence 6666666666666543322 25566666666666633 2 234566666666666654322 322 44445555
Q ss_pred CccCcCCcccccCCccccceeeccCcccccccCccccCCCCCCEEEccCCcccCCCCcCCcCCCCCCeEEccCCcccCCC
Q 004268 196 YNKLVGPVTKEVGNMKNLDRLHLNGNNLTGSIPSTIGYLNLLDELHLSHNRLDGPIPPTIGNLTNLIALDLSSNQLSGLL 275 (764)
Q Consensus 196 ~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 275 (764)
+|+++.++. .+++|+.|+|++|.|++ +|. .+++|+.|+|++|+++++
T Consensus 129 ~N~l~~lp~----------------------------~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~l- 175 (571)
T 3cvr_A 129 NNQLTMLPE----------------------------LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTFL- 175 (571)
T ss_dssp SSCCSCCCC----------------------------CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSCC-
T ss_pred CCcCCCCCC----------------------------cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCCc-
Confidence 444443222 34455555555555553 222 345555555555555542
Q ss_pred CccccCCCCCCeEeccCccccCCCCCCCCCCCcc-------ceEEccCCcCccCCChhhhcccccceeeccccccccCCc
Q 004268 276 PREVGNLKYLASLSLNGNILIGPIPPTIGYLTNL-------TYLNLGYNRLSSSIPPELMNCSQLLNLVLSHNSLSGSIP 348 (764)
Q Consensus 276 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L-------~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~ 348 (764)
|. |. ++|+.|+|++|+|+. +|. +.. +| +.|+|++|+|+ .+|..+..+++|+.|+|++|++++.+|
T Consensus 176 p~-l~--~~L~~L~Ls~N~L~~-lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p 247 (571)
T 3cvr_A 176 PE-LP--ESLEALDVSTNLLES-LPA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIR 247 (571)
T ss_dssp CC-CC--TTCCEEECCSSCCSS-CCC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHH
T ss_pred ch-hh--CCCCEEECcCCCCCc-hhh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCH
Confidence 22 33 556666666665552 233 332 44 88888888888 567777778888888888888887777
Q ss_pred hhcccccc
Q 004268 349 SEIGNLIF 356 (764)
Q Consensus 349 ~~~~~l~~ 356 (764)
..+..+..
T Consensus 248 ~~l~~l~~ 255 (571)
T 3cvr_A 248 ESLSQQTA 255 (571)
T ss_dssp HHHHHHHH
T ss_pred HHHHHhhc
Confidence 77766543
No 361
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.83 E-value=3.7e-20 Score=181.41 Aligned_cols=156 Identities=19% Similarity=0.197 Sum_probs=113.2
Q ss_pred CEEEccCCcccCCCCcCCcCCCCCCeEEccCCcccCCCC-ccccCCCCCCeEeccCccccCCCCCCCCCCCccceEEccC
Q 004268 238 DELHLSHNRLDGPIPPTIGNLTNLIALDLSSNQLSGLLP-REVGNLKYLASLSLNGNILIGPIPPTIGYLTNLTYLNLGY 316 (764)
Q Consensus 238 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~ 316 (764)
+.+++++|.++. +|..+. ..++.|+|++|.++++.+ ..|..+++|+.|+|++|+++++.+..|..+++|++|+|++
T Consensus 14 ~~l~~s~n~l~~-iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 14 TTVDCSNQKLNK-IPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp TEEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEeEeCCCCccc-CccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 466666666663 333332 345677777777766533 4467777777777777777766666777777777777777
Q ss_pred CcCccCCChhhhcccccceeeccccccccCCchhcccccccceeecccccccCCCCCCCCCCCccceecCCCCccccccC
Q 004268 317 NRLSSSIPPELMNCSQLLNLVLSHNSLSGSIPSEIGNLIFFRQLDLSRNFINGTIPSQLGKIPNISAVDLSKNNLSGVIP 396 (764)
Q Consensus 317 N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~ 396 (764)
|++++..+..|.++++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..|..|..+++|+.|++++|+++|..+
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 77776666667777788888888888877777777778888888888888887777788888888888888888876655
No 362
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.83 E-value=4.8e-19 Score=189.12 Aligned_cols=265 Identities=11% Similarity=0.092 Sum_probs=130.9
Q ss_pred CCCcEEEcCCCcCcccCCccccCCCCCCEEEccCCcCcccCCcccCCCCCCCEEecCCCcccccCCccCcCCCCCCEEEc
Q 004268 43 SKLEKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLDLNLSNNILNGSIPLEFGNLKDLDQLRL 122 (764)
Q Consensus 43 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 122 (764)
..++.+.+.. .++.+...+|.++ +|+.++|.++ ++.+...+|.++ +|+.+.|.+ .++.+...+|.++++|+.+++
T Consensus 113 ~~l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l 187 (401)
T 4fdw_A 113 KGYNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKADL 187 (401)
T ss_dssp SSCSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEEC
T ss_pred CCccEEEECC-ccCEehHhhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeeec
Confidence 4444444443 2333444444443 4555555444 443444444442 355555543 344444445555555555555
Q ss_pred cCCcCcccCCccccCCCCcCEEecccCcccccCCccccCCCCCCeeecccCCCCCCCCCccccCCCccEEEecCccCcCC
Q 004268 123 QGNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNLKSLFLDNNHLSGPIPSTLYHLNQLATLCLGYNKLVGP 202 (764)
Q Consensus 123 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~ 202 (764)
.+|.++.+...+|. +.+|+.+.|..+ ++.+...+|.++++|+.+.+..| +..+
T Consensus 188 ~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-------------------------l~~I 240 (401)
T 4fdw_A 188 SKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-------------------------VSTI 240 (401)
T ss_dssp TTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-------------------------CCEE
T ss_pred CCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-------------------------ccCc
Confidence 55555544444444 344555555422 44444445555555555555443 3334
Q ss_pred cccccCCccccceeeccCcccccccCccccCCCCCCEEEccCCccc-----CCCCcCCcCCCCCCeEEccCCcccCCCCc
Q 004268 203 VTKEVGNMKNLDRLHLNGNNLTGSIPSTIGYLNLLDELHLSHNRLD-----GPIPPTIGNLTNLIALDLSSNQLSGLLPR 277 (764)
Q Consensus 203 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-----~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 277 (764)
...+|.+ .+|+.+.+. +.++.+...+|..+++|+.+++.+|.+. .+...+|.++++|+.++|. +.+..+...
T Consensus 241 ~~~aF~~-~~L~~i~lp-~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~ 317 (401)
T 4fdw_A 241 GQEAFRE-SGITTVKLP-NGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQG 317 (401)
T ss_dssp CTTTTTT-CCCSEEEEE-TTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTT
T ss_pred ccccccc-CCccEEEeC-CCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhh
Confidence 4444444 444444442 3334344444555555555555444433 3444556666666666665 335545555
Q ss_pred cccCCCCCCeEeccCccccCCCCCCCCCCCccceEEccCCcCccCCChhhhccc-ccceeeccccccc
Q 004268 278 EVGNLKYLASLSLNGNILIGPIPPTIGYLTNLTYLNLGYNRLSSSIPPELMNCS-QLLNLVLSHNSLS 344 (764)
Q Consensus 278 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~-~L~~L~ls~N~l~ 344 (764)
+|.++.+|+.+.|..| ++.+...+|..+ +|+.+++++|.+.......|.+++ +++.|++..+.+.
T Consensus 318 aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 318 LLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESVE 383 (401)
T ss_dssp TTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGHH
T ss_pred hhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHHH
Confidence 5666666666666443 444455556665 666666666665554555555553 5566666665543
No 363
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.83 E-value=3.3e-20 Score=208.43 Aligned_cols=188 Identities=23% Similarity=0.344 Sum_probs=95.2
Q ss_pred eeEEEeCCCCccccCCccccCCCCCcEEEcCCCcCcccCCccccCCCCCCEEEccCCcCcccCCcccCCCCCCCEEecCC
Q 004268 21 LVTFRIWGTLLSGRMPSEIGALSKLEKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLDLNLSN 100 (764)
Q Consensus 21 l~~L~l~~~~~~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~ 100 (764)
+..+.+..+.+...++ +..+++|+.|++++|.++.+ + .+..+++|+.|+|++|+|++..+ +..+++|++|+|++
T Consensus 23 l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~ 96 (605)
T 1m9s_A 23 TIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDE 96 (605)
T ss_dssp HHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCCC-T-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCS
T ss_pred HHHHhccCCCcccccc--hhcCCCCCEEECcCCCCCCC-h-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcC
Confidence 4444555555543322 34555666666666666532 2 35556666666666666654332 55556666666666
Q ss_pred CcccccCCccCcCCCCCCEEEccCCcCcccCCccccCCCCcCEEecccCcccccCCccccCCCCCCeeecccCCCCCCCC
Q 004268 101 NILNGSIPLEFGNLKDLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNLKSLFLDNNHLSGPIP 180 (764)
Q Consensus 101 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~ 180 (764)
|.++.+ ..|..+++|++|+|++|.+..+ ..+..+++|+.|+|++|.++++ ..+..+++|+.|+|++|.++++.+
T Consensus 97 N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~ 170 (605)
T 1m9s_A 97 NKIKDL--SSLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP 170 (605)
T ss_dssp SCCCCC--TTSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG
T ss_pred CCCCCC--hhhccCCCCCEEEecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh
Confidence 665532 1455555555555555555543 2355555555555555555543 345555555555555555544332
Q ss_pred CccccCCCccEEEecCccCcCCcccccCCccccceeeccCcccc
Q 004268 181 STLYHLNQLATLCLGYNKLVGPVTKEVGNMKNLDRLHLNGNNLT 224 (764)
Q Consensus 181 ~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~ 224 (764)
+..+++|+.|+|++|.+..+ ..+..+++|+.|+|++|.+.
T Consensus 171 --l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~ 210 (605)
T 1m9s_A 171 --LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECL 210 (605)
T ss_dssp --GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEE
T ss_pred --hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCc
Confidence 44444444444444444432 12334444444444444443
No 364
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.83 E-value=5.6e-19 Score=188.60 Aligned_cols=269 Identities=10% Similarity=0.062 Sum_probs=196.0
Q ss_pred cccCCCeeEEEeCCCCccccCCccccCCCCCcEEEcCCCcCcccCCccccCCCCCCEEEccCCcCcccCCcccCCCCCCC
Q 004268 15 FTCFPNLVTFRIWGTLLSGRMPSEIGALSKLEKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTGTIPSEIGSLRDLL 94 (764)
Q Consensus 15 ~~~~~~l~~L~l~~~~~~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~ 94 (764)
+..+..++.+.+-.+ ++.+-..+|..+ +|+.+.+..+ ++.+...+|.++ +|+.+.|.+ .++.+...+|.++++|+
T Consensus 109 ~~~~~~l~~i~ip~~-i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~ 183 (401)
T 4fdw_A 109 TEILKGYNEIILPNS-VKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLK 183 (401)
T ss_dssp EEECSSCSEEECCTT-CCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCC
T ss_pred EEecCCccEEEECCc-cCEehHhhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCC
Confidence 344567777777654 666777788886 7999999887 777888999985 799999997 77778889999999999
Q ss_pred EEecCCCcccccCCccCcCCCCCCEEEccCCcCcccCCccccCCCCcCEEecccCcccccCCccccCCCCCCeeecccCC
Q 004268 95 DLNLSNNILNGSIPLEFGNLKDLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNLKSLFLDNNH 174 (764)
Q Consensus 95 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 174 (764)
.++|++|.++.+...+|. ..+|+.+.|..+ +..+...+|.++++|+.+++..| ++.+...+|.+ .+|+.+.+ .+.
T Consensus 184 ~l~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~ 258 (401)
T 4fdw_A 184 KADLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNG 258 (401)
T ss_dssp EEECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETT
T ss_pred eeecCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe-CCC
Confidence 999999999999999998 589999999855 88899999999999999999985 67788899998 88999999 455
Q ss_pred CCCCCCCccccCCCccEEEecCccCc-----CCcccccCCccccceeeccCcccccccCccccCCCCCCEEEccCCcccC
Q 004268 175 LSGPIPSTLYHLNQLATLCLGYNKLV-----GPVTKEVGNMKNLDRLHLNGNNLTGSIPSTIGYLNLLDELHLSHNRLDG 249 (764)
Q Consensus 175 i~~~~~~~~~~l~~L~~L~l~~n~i~-----~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 249 (764)
++.+...+|.++++|+.+++.+|.+. .+...+|.++++|+.+.+. +.++ .
T Consensus 259 i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~------------------------~ 313 (401)
T 4fdw_A 259 VTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIR------------------------I 313 (401)
T ss_dssp CCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCC------------------------E
T ss_pred ccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceE------------------------E
Confidence 77788888999999999988887665 3444445555555555554 2244 3
Q ss_pred CCCcCCcCCCCCCeEEccCCcccCCCCccccCCCCCCeEeccCccccCCCCCCCCCCC-ccceEEccCCcCc
Q 004268 250 PIPPTIGNLTNLIALDLSSNQLSGLLPREVGNLKYLASLSLNGNILIGPIPPTIGYLT-NLTYLNLGYNRLS 320 (764)
Q Consensus 250 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~-~L~~L~ls~N~l~ 320 (764)
+...+|.++++|+.++|..| +..+...+|.++ +|+.+++++|.+.......|..++ +++.|++..+.+.
T Consensus 314 I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 314 LGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESVE 383 (401)
T ss_dssp ECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGHH
T ss_pred EhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHHH
Confidence 44445555555555555333 443444555555 555555555555544444555543 5566666555443
No 365
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.82 E-value=3e-21 Score=202.16 Aligned_cols=285 Identities=13% Similarity=0.077 Sum_probs=213.7
Q ss_pred cCCCeeEEEeCCCCccccCCccccC-CCCCcEEEcCCCcCc--ccCCccccCCCCCCEEEccCCcCcccCCcccCC----
Q 004268 17 CFPNLVTFRIWGTLLSGRMPSEIGA-LSKLEKLVLSHNSLT--GRIPSEIGALSRLKVLDLSYNRLTGTIPSEIGS---- 89 (764)
Q Consensus 17 ~~~~l~~L~l~~~~~~~~~~~~~~~-l~~L~~L~Ls~n~i~--~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~---- 89 (764)
.+++++.|.+.|+ +....-..+.. +++|+.|||++|+|. ......+.. ++.+.+..|.| .+.+|.+
T Consensus 23 ~~~~l~~L~l~g~-i~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~~~~~~---~~~~~~~~~~I---~~~aF~~~~~~ 95 (329)
T 3sb4_A 23 EANSITHLTLTGK-LNAEDFRHLRDEFPSLKVLDISNAEIKMYSGKAGTYPN---GKFYIYMANFV---PAYAFSNVVNG 95 (329)
T ss_dssp HHHHCSEEEEEEE-ECHHHHHHHHHSCTTCCEEEEEEEEECCEEESSSSSGG---GCCEEECTTEE---CTTTTEEEETT
T ss_pred hhCceeEEEEecc-ccHHHHHHHHHhhccCeEEecCcceeEEecCccccccc---ccccccccccc---CHHHhcccccc
Confidence 4677999999876 32222234444 789999999999998 444333333 56677777744 4577888
Q ss_pred ----CCCCCEEecCCCcccccCCccCcCCCCCCEEEccCCcCcccCCccccCCCCcCEEecccCc----ccccCCccccC
Q 004268 90 ----LRDLLDLNLSNNILNGSIPLEFGNLKDLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLSLNQ----LSGRLPQEVGN 161 (764)
Q Consensus 90 ----l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~----l~~~~~~~~~~ 161 (764)
+++|+.|+|++ .++.+.+.+|.++++|++|++++|.+..+.+.+|.++.++..+.+..+. ...+...+|.+
T Consensus 96 ~~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~ 174 (329)
T 3sb4_A 96 VTKGKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIE 174 (329)
T ss_dssp EEEECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEE
T ss_pred cccccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhcccccccccccc
Confidence 99999999999 8888999999999999999999999999999999999989888877643 33455667888
Q ss_pred CCCCC-eeecccCCCCCCCCCcc---ccCCCccEEEecCccCcCCccccc-CCccccceeeccCcccccccCccccCCCC
Q 004268 162 LKNLK-SLFLDNNHLSGPIPSTL---YHLNQLATLCLGYNKLVGPVTKEV-GNMKNLDRLHLNGNNLTGSIPSTIGYLNL 236 (764)
Q Consensus 162 l~~L~-~L~L~~n~i~~~~~~~~---~~l~~L~~L~l~~n~i~~~~~~~~-~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 236 (764)
+..|+ .+.+....- +....+ ....++..+.+.++-.. .....+ ..+++|+.|+|++|+++.+...+|..+.+
T Consensus 175 ~~~L~~~i~~~~~~~--l~~~~~~~~~~~~~~~~l~~~~~l~~-~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~ 251 (329)
T 3sb4_A 175 GEPLETTIQVGAMGK--LEDEIMKAGLQPRDINFLTIEGKLDN-ADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKY 251 (329)
T ss_dssp SCCCEEEEEECTTCC--HHHHHHHTTCCGGGCSEEEEEECCCH-HHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTT
T ss_pred ccccceeEEecCCCc--HHHHHhhcccCccccceEEEeeeecH-HHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCC
Confidence 88887 555543321 111111 12455666766655221 111122 23688999999988888888888999999
Q ss_pred CCEEEccCCcccCCCCcCCcCCCCCC-eEEccCCcccCCCCccccCCCCCCeEeccCccccCCCCCCCCCCCccceEEc
Q 004268 237 LDELHLSHNRLDGPIPPTIGNLTNLI-ALDLSSNQLSGLLPREVGNLKYLASLSLNGNILIGPIPPTIGYLTNLTYLNL 314 (764)
Q Consensus 237 L~~L~L~~n~l~~~~~~~~~~l~~L~-~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 314 (764)
|++|+|++| ++.+.+.+|.++++|+ .+++.+ .++.+.+.+|.++++|+.|++++|.+..+.+.+|.++++|+.++.
T Consensus 252 L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 252 LLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp CCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred CCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhcc
Confidence 999999888 7778888899999998 999988 777788888999999999999899888888888999999988864
No 366
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.82 E-value=2.1e-20 Score=210.03 Aligned_cols=171 Identities=26% Similarity=0.334 Sum_probs=82.6
Q ss_pred CCCCCCeeecccCCCCCCCCCccccCCCccEEEecCccCcCCcccccCCccccceeeccCcccccccCccccCCCCCCEE
Q 004268 161 NLKNLKSLFLDNNHLSGPIPSTLYHLNQLATLCLGYNKLVGPVTKEVGNMKNLDRLHLNGNNLTGSIPSTIGYLNLLDEL 240 (764)
Q Consensus 161 ~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 240 (764)
.+++|+.|++++|.+..+. .+..+++|+.|+|++|.+..+.+ +..+++|+.|+|++|.+++. ..+..+++|+.|
T Consensus 41 ~L~~L~~L~l~~n~i~~l~--~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L 114 (605)
T 1m9s_A 41 ELNSIDQIIANNSDIKSVQ--GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKDL--SSLKDLKKLKSL 114 (605)
T ss_dssp HHTTCCCCBCTTCCCCCCT--TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCC--TTSTTCTTCCEE
T ss_pred cCCCCCEEECcCCCCCCCh--HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCCC--hhhccCCCCCEE
Confidence 3444444444444444321 23444444444444444443332 44444444444444444421 134445555555
Q ss_pred EccCCcccCCCCcCCcCCCCCCeEEccCCcccCCCCccccCCCCCCeEeccCccccCCCCCCCCCCCccceEEccCCcCc
Q 004268 241 HLSHNRLDGPIPPTIGNLTNLIALDLSSNQLSGLLPREVGNLKYLASLSLNGNILIGPIPPTIGYLTNLTYLNLGYNRLS 320 (764)
Q Consensus 241 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~ 320 (764)
+|++|.+.+. ..+..+++|+.|+|++|.++++ ..+..+++|+.|+|++|.+.+..| +..+++|+.|+|++|+|+
T Consensus 115 ~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~ 188 (605)
T 1m9s_A 115 SLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHIS 188 (605)
T ss_dssp ECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC
T ss_pred EecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCC
Confidence 5555555432 2345555555555555555533 345555555555555555554433 555555555555555555
Q ss_pred cCCChhhhcccccceeecccccccc
Q 004268 321 SSIPPELMNCSQLLNLVLSHNSLSG 345 (764)
Q Consensus 321 ~~~~~~~~~l~~L~~L~ls~N~l~~ 345 (764)
+. ..+..+++|+.|+|++|++++
T Consensus 189 ~l--~~l~~l~~L~~L~L~~N~l~~ 211 (605)
T 1m9s_A 189 DL--RALAGLKNLDVLELFSQECLN 211 (605)
T ss_dssp BC--GGGTTCTTCSEEECCSEEEEC
T ss_pred CC--hHHccCCCCCEEEccCCcCcC
Confidence 32 235555555555555555553
No 367
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.82 E-value=1.2e-19 Score=177.67 Aligned_cols=151 Identities=23% Similarity=0.252 Sum_probs=87.3
Q ss_pred EEEcCCCcCcccCCccccCCCCCCEEEccCCcCcccCC-cccCCCCCCCEEecCCCcccccCCccCcCCCCCCEEEccCC
Q 004268 47 KLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTGTIP-SEIGSLRDLLDLNLSNNILNGSIPLEFGNLKDLDQLRLQGN 125 (764)
Q Consensus 47 ~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 125 (764)
.+++++|.++. +|..+. ..+++|+|++|+|++..+ ..|..+++|++|+|++|.|+++.+.+|.++++|++|+|++|
T Consensus 15 ~l~~s~n~l~~-iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 91 (220)
T 2v70_A 15 TVDCSNQKLNK-IPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSN 91 (220)
T ss_dssp EEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EeEeCCCCccc-CccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCC
Confidence 55555555553 333332 234556666666654432 34555666666666666666555555666666666666666
Q ss_pred cCcccCCccccCCCCcCEEecccCcccccCCccccCCCCCCeeecccCCCCCCCCCccccCCCccEEEecCccCc
Q 004268 126 KLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNLKSLFLDNNHLSGPIPSTLYHLNQLATLCLGYNKLV 200 (764)
Q Consensus 126 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~ 200 (764)
+++++.+..|.++++|++|+|++|+++++.+..|.++++|+.|+|++|.++++.+..|..+++|+.|+|++|.+.
T Consensus 92 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 166 (220)
T 2v70_A 92 RLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFN 166 (220)
T ss_dssp CCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEE
T ss_pred ccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCc
Confidence 666555555666666666666666666555556666666666666666666555555555556666666655554
No 368
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.82 E-value=1.4e-19 Score=178.66 Aligned_cols=156 Identities=24% Similarity=0.268 Sum_probs=122.3
Q ss_pred CCEEEccCCcccCCCCcCCcCCCCCCeEEccCCcccCCCCccccCCCCCCeEeccCccccCCCCCCCCCCCccceEEccC
Q 004268 237 LDELHLSHNRLDGPIPPTIGNLTNLIALDLSSNQLSGLLPREVGNLKYLASLSLNGNILIGPIPPTIGYLTNLTYLNLGY 316 (764)
Q Consensus 237 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~ 316 (764)
.+.++++++.++. +|..+. ++|+.|+|++|.++++.+..|.++++|+.|+|++|++..+.+..|..+++|++|+|++
T Consensus 21 ~~~v~c~~~~l~~-ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~ 97 (229)
T 3e6j_A 21 GTTVDCRSKRHAS-VPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGT 97 (229)
T ss_dssp TTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEeEccCCCcCc-cCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCC
Confidence 4567777777763 333333 6778888888888777777778888888888888888766666777888888888888
Q ss_pred CcCccCCChhhhcccccceeeccccccccCCchhcccccccceeecccccccCCCCCCCCCCCccceecCCCCccccccC
Q 004268 317 NRLSSSIPPELMNCSQLLNLVLSHNSLSGSIPSEIGNLIFFRQLDLSRNFINGTIPSQLGKIPNISAVDLSKNNLSGVIP 396 (764)
Q Consensus 317 N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~ 396 (764)
|+|+...+..|..+++|++|+|++|+|+ .+|..+..+++|+.|+|++|+|++..+..|..+++|+.|++++|+++|..+
T Consensus 98 N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 98 NQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred CcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 8888666666788888888888888888 667778888888888888888887777788888999999999999887665
No 369
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.80 E-value=6.3e-19 Score=173.89 Aligned_cols=149 Identities=30% Similarity=0.303 Sum_probs=64.9
Q ss_pred EEEeCCCCccccCCccccCCCCCcEEEcCCCcCcccCCccccCCCCCCEEEccCCcCcccCCcccCCCCCCCEEecCCCc
Q 004268 23 TFRIWGTLLSGRMPSEIGALSKLEKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLDLNLSNNI 102 (764)
Q Consensus 23 ~L~l~~~~~~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~ 102 (764)
.+++++++++ .+|..+. ++|++|+|++|+++++.|..|..+++|++|+|++|+|+...+..|..+++|++|+|++|.
T Consensus 23 ~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~ 99 (229)
T 3e6j_A 23 TVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQ 99 (229)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCc
Confidence 3444444443 3333222 344444444444444444444444444444444444443333344444444444444444
Q ss_pred ccccCCccCcCCCCCCEEEccCCcCcccCCccccCCCCcCEEecccCcccccCCccccCCCCCCeeecccCCC
Q 004268 103 LNGSIPLEFGNLKDLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNLKSLFLDNNHL 175 (764)
Q Consensus 103 l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i 175 (764)
++.+.+..|..+++|++|+|++|+++.+ |..+.++++|++|+|++|+++.+.+..|..+++|+.|+|++|.+
T Consensus 100 l~~l~~~~~~~l~~L~~L~Ls~N~l~~l-p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~ 171 (229)
T 3e6j_A 100 LTVLPSAVFDRLVHLKELFMCCNKLTEL-PRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPW 171 (229)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCSC-CTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCB
T ss_pred CCccChhHhCcchhhCeEeccCCccccc-CcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCc
Confidence 4444444444444444444444444422 33334444444444444444443333444444444444444443
No 370
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.79 E-value=7.8e-18 Score=180.88 Aligned_cols=336 Identities=11% Similarity=0.028 Sum_probs=239.3
Q ss_pred CccccCCccccCCCCCcEEEcCCCcCcccCCccccCCCCCCEEEccCCcCcccCCcccCCCCCCCEEecCCCcccccCCc
Q 004268 30 LLSGRMPSEIGALSKLEKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLDLNLSNNILNGSIPL 109 (764)
Q Consensus 30 ~~~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 109 (764)
.++.+-..+|.+|.+|+.+.|.. .++.+...+|.++++|+.++|.++ ++.+...+|.++.+|+.+.+..+ +..+...
T Consensus 58 ~VtsIg~~AF~~c~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~ 134 (394)
T 4fs7_A 58 DVVSIGYAAFQGCRKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVE 134 (394)
T ss_dssp EEEEECTTTTTTCTTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTT
T ss_pred eEeEhHHHHhhCCCCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecce
Confidence 35556667788888888888874 466677778888888888888765 55566778888888888777655 4447777
Q ss_pred cCcCCCCCCEEEccCCcCcccCCccccCCCCcCEEecccCcccccCCccccCCCCCCeeecccCCCCCCCCCccccCCCc
Q 004268 110 EFGNLKDLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNLKSLFLDNNHLSGPIPSTLYHLNQL 189 (764)
Q Consensus 110 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L 189 (764)
+|.++..++.... +.+..+...+|.++++|+.+.+.++.. .+...+|.++.+|+.+.+..| ++.+...+|.++..|
T Consensus 135 aF~~~~~~~~~~~--~~~~~i~~~aF~~c~~L~~i~l~~~~~-~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L 210 (394)
T 4fs7_A 135 AFKGCDFKEITIP--EGVTVIGDEAFATCESLEYVSLPDSME-TLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILL 210 (394)
T ss_dssp TTTTCCCSEEECC--TTCCEECTTTTTTCTTCCEEECCTTCC-EECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTC
T ss_pred eeecccccccccC--ccccccchhhhcccCCCcEEecCCccc-eeccccccCCCCceEEEcCCC-ceEeCchhhcccccc
Confidence 7877754333322 223345567788888888888876543 477778888888888888766 555777778888888
Q ss_pred cEEEecCccCcCCcccccCCccccceeeccCcccccccCccccCCCCCCEEEccCCcccCCCCcCCcCCCCCCeEEccCC
Q 004268 190 ATLCLGYNKLVGPVTKEVGNMKNLDRLHLNGNNLTGSIPSTIGYLNLLDELHLSHNRLDGPIPPTIGNLTNLIALDLSSN 269 (764)
Q Consensus 190 ~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 269 (764)
+.+.+..+... +.. .+.....|+.+.+..+ ++.+...+|..+..|+.+.+..+... +...+|..+..++.+.+..+
T Consensus 211 ~~i~~~~~~~~-i~~-~~~~~~~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~ 286 (394)
T 4fs7_A 211 ENMEFPNSLYY-LGD-FALSKTGVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSV 286 (394)
T ss_dssp CBCCCCTTCCE-ECT-TTTTTCCCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSS
T ss_pred ceeecCCCceE-eeh-hhcccCCCceEEECCC-ceecccccccccccceeEEcCCCcce-eeccccccccccceeccCce
Confidence 87777665433 222 2334467788877644 34466677788888888888777555 66677888888888887776
Q ss_pred cccCCCCccccCCCCCCeEeccCccccCCCCCCCCCCCccceEEccCCcCccCCChhhhcccccceeeccccccccCCch
Q 004268 270 QLSGLLPREVGNLKYLASLSLNGNILIGPIPPTIGYLTNLTYLNLGYNRLSSSIPPELMNCSQLLNLVLSHNSLSGSIPS 349 (764)
Q Consensus 270 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~ 349 (764)
.+. ...|.++.+|+.+.+..+ +..+...+|..+.+|+.++|.++ ++.+...+|.++.+|+.+++..| ++.+...
T Consensus 287 ~i~---~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~ 360 (394)
T 4fs7_A 287 IVP---EKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGAN 360 (394)
T ss_dssp EEC---TTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTT
T ss_pred eec---cccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHH
Confidence 543 356778888888888665 55566677888888888888654 66566778888888888888777 6667777
Q ss_pred hcccccccceeecccccccCCCCCCCCCCCcccee
Q 004268 350 EIGNLIFFRQLDLSRNFINGTIPSQLGKIPNISAV 384 (764)
Q Consensus 350 ~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l 384 (764)
.|.++.+|+.+++..+ +. ....+|.+.++|+.+
T Consensus 361 aF~~C~~L~~i~lp~~-~~-~~~~~F~~c~~L~~I 393 (394)
T 4fs7_A 361 AFQGCINLKKVELPKR-LE-QYRYDFEDTTKFKWI 393 (394)
T ss_dssp TBTTCTTCCEEEEEGG-GG-GGGGGBCTTCEEEEE
T ss_pred HhhCCCCCCEEEECCC-CE-EhhheecCCCCCcEE
Confidence 8888888888888765 33 334567777777764
No 371
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.79 E-value=3.7e-18 Score=183.38 Aligned_cols=319 Identities=10% Similarity=0.001 Sum_probs=227.0
Q ss_pred cCcccCCccccCCCCCCEEEccCCcCcccCCcccCCCCCCCEEecCCCcccccCCccCcCCCCCCEEEccCCcCcccCCc
Q 004268 54 SLTGRIPSEIGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLDLNLSNNILNGSIPLEFGNLKDLDQLRLQGNKLDGLIPS 133 (764)
Q Consensus 54 ~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 133 (764)
.++.+...+|.++.+|+.+.|..+ ++.+...+|.++.+|+.++|.++ ++.+...+|.++.+|+.+.+..+ +..+...
T Consensus 58 ~VtsIg~~AF~~c~~L~~i~lp~~-i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~ 134 (394)
T 4fs7_A 58 DVVSIGYAAFQGCRKVTEIKIPST-VREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVE 134 (394)
T ss_dssp EEEEECTTTTTTCTTEEEEECCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTT
T ss_pred eEeEhHHHHhhCCCCceEEEeCCC-ccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecce
Confidence 456667778888888888888754 66666778888888888888755 56577778888888888776654 5556677
Q ss_pred cccCCCCcCEEecccCcccccCCccccCCCCCCeeecccCCCCCCCCCccccCCCccEEEecCccCcCCcccccCCcccc
Q 004268 134 SIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNLKSLFLDNNHLSGPIPSTLYHLNQLATLCLGYNKLVGPVTKEVGNMKNL 213 (764)
Q Consensus 134 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L 213 (764)
+|.++..++..... .+..+...+|.++++|+.+.+.++. ..+...+|.++.+|+.+.+..+ +..+...+|.++..|
T Consensus 135 aF~~~~~~~~~~~~--~~~~i~~~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L 210 (394)
T 4fs7_A 135 AFKGCDFKEITIPE--GVTVIGDEAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILL 210 (394)
T ss_dssp TTTTCCCSEEECCT--TCCEECTTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTC
T ss_pred eeecccccccccCc--cccccchhhhcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC-ceEeCchhhcccccc
Confidence 77777544433322 2333566778888888888887654 3377778888888888888766 555677778888888
Q ss_pred ceeeccCcccccccCccccCCCCCCEEEccCCcccCCCCcCCcCCCCCCeEEccCCcccCCCCccccCCCCCCeEeccCc
Q 004268 214 DRLHLNGNNLTGSIPSTIGYLNLLDELHLSHNRLDGPIPPTIGNLTNLIALDLSSNQLSGLLPREVGNLKYLASLSLNGN 293 (764)
Q Consensus 214 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n 293 (764)
+.+.+..+... + ...+.....|+.+.+..+. +.+...+|..+.+|+.+.+..+... +....|..+..++.+....+
T Consensus 211 ~~i~~~~~~~~-i-~~~~~~~~~l~~i~ip~~~-~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~ 286 (394)
T 4fs7_A 211 ENMEFPNSLYY-L-GDFALSKTGVKNIIIPDSF-TELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSV 286 (394)
T ss_dssp CBCCCCTTCCE-E-CTTTTTTCCCCEEEECTTC-CEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSS
T ss_pred ceeecCCCceE-e-ehhhcccCCCceEEECCCc-eecccccccccccceeEEcCCCcce-eeccccccccccceeccCce
Confidence 88887766543 2 2333345678888776543 3355667778888888888777554 66677888888888877776
Q ss_pred cccCCCCCCCCCCCccceEEccCCcCccCCChhhhcccccceeeccccccccCCchhcccccccceeecccccccCCCCC
Q 004268 294 ILIGPIPPTIGYLTNLTYLNLGYNRLSSSIPPELMNCSQLLNLVLSHNSLSGSIPSEIGNLIFFRQLDLSRNFINGTIPS 373 (764)
Q Consensus 294 ~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 373 (764)
.+. ...|..+.+|+.+.+.++ ++.+...+|.++.+|+.++|.++ ++.+....|.++.+|+.+++..| ++.+...
T Consensus 287 ~i~---~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~ 360 (394)
T 4fs7_A 287 IVP---EKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGAN 360 (394)
T ss_dssp EEC---TTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTT
T ss_pred eec---cccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHH
Confidence 543 246777788888888765 55566677888888888888654 66566777888888888888776 6666777
Q ss_pred CCCCCCccceecCCCC
Q 004268 374 QLGKIPNISAVDLSKN 389 (764)
Q Consensus 374 ~~~~l~~L~~l~l~~N 389 (764)
+|.++++|+.+++..|
T Consensus 361 aF~~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 361 AFQGCINLKKVELPKR 376 (394)
T ss_dssp TBTTCTTCCEEEEEGG
T ss_pred HhhCCCCCCEEEECCC
Confidence 8888888888877544
No 372
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.79 E-value=3.2e-19 Score=171.70 Aligned_cols=153 Identities=19% Similarity=0.215 Sum_probs=104.9
Q ss_pred cCCCCCcEEEcCCCcCcccCCccccCCCCCCEEEccCCcCcccCCcccCCCCCCCEEecCCCcccccCCccCcCCCCCCE
Q 004268 40 GALSKLEKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLDLNLSNNILNGSIPLEFGNLKDLDQ 119 (764)
Q Consensus 40 ~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 119 (764)
..+++|++|++++|.++. +| .+..+++|++|++++|.++. +..+..+++|++|+|++|.+++..+..|..+++|++
T Consensus 41 ~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~l~~n~~~~--~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~ 116 (197)
T 4ezg_A 41 AQMNSLTYITLANINVTD-LT-GIEYAHNIKDLTINNIHATN--YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTL 116 (197)
T ss_dssp HHHHTCCEEEEESSCCSC-CT-TGGGCTTCSEEEEESCCCSC--CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCE
T ss_pred hhcCCccEEeccCCCccC-hH-HHhcCCCCCEEEccCCCCCc--chhhhcCCCCCEEEeECCccCcccChhhcCCCCCCE
Confidence 556677777777777763 33 46677777777777776652 246677777777777777777666667777777777
Q ss_pred EEccCCcCcccCCccccCCCCcCEEecccCc-ccccCCccccCCCCCCeeecccCCCCCCCCCccccCCCccEEEecCcc
Q 004268 120 LRLQGNKLDGLIPSSIGNLTNLTYLDLSLNQ-LSGRLPQEVGNLKNLKSLFLDNNHLSGPIPSTLYHLNQLATLCLGYNK 198 (764)
Q Consensus 120 L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~-l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~ 198 (764)
|++++|++++..+..+..+++|++|+|++|. ++.+ + .+.++++|++|++++|.++++. .+..+++|+.|++++|+
T Consensus 117 L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~-~-~l~~l~~L~~L~l~~n~i~~~~--~l~~l~~L~~L~l~~N~ 192 (197)
T 4ezg_A 117 LDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDI-M-PLKTLPELKSLNIQFDGVHDYR--GIEDFPKLNQLYAFSQT 192 (197)
T ss_dssp EECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCC-G-GGGGCSSCCEEECTTBCCCCCT--TGGGCSSCCEEEECBC-
T ss_pred EEecCCccCcHhHHHHhhCCCCCEEEccCCCCcccc-H-hhcCCCCCCEEECCCCCCcChH--HhccCCCCCEEEeeCcc
Confidence 7777777776666667777777777777776 6544 2 5777777777777777776543 56777777777777777
Q ss_pred Cc
Q 004268 199 LV 200 (764)
Q Consensus 199 i~ 200 (764)
+.
T Consensus 193 i~ 194 (197)
T 4ezg_A 193 IG 194 (197)
T ss_dssp --
T ss_pred cC
Confidence 65
No 373
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.79 E-value=1.1e-19 Score=183.26 Aligned_cols=170 Identities=23% Similarity=0.267 Sum_probs=103.4
Q ss_pred CCCeeEEEeCCCCccccCCccccCCCCCcEEEcCCCcCcccCCccccCCCCCCEEEccCCcCcccCCcccCCCCCCCEEe
Q 004268 18 FPNLVTFRIWGTLLSGRMPSEIGALSKLEKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLDLN 97 (764)
Q Consensus 18 ~~~l~~L~l~~~~~~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~ 97 (764)
+.++..+++.++.+++.. .+..+++|++|++++|.++.+ + .+..+++|++|+|++|+|++..+ +..+++|++|+
T Consensus 18 l~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~ 91 (263)
T 1xeu_A 18 LANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQSL-A-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELS 91 (263)
T ss_dssp HHHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEE
T ss_pred HHHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCcccc-h-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEE
Confidence 344556666666665432 466666777777777776643 3 56666777777777777664333 66667777777
Q ss_pred cCCCcccccCCccCcCCCCCCEEEccCCcCcccCCccccCCCCcCEEecccCcccccCCccccCCCCCCeeecccCCCCC
Q 004268 98 LSNNILNGSIPLEFGNLKDLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNLKSLFLDNNHLSG 177 (764)
Q Consensus 98 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~ 177 (764)
|++|.++++.+ +.. ++|++|+|++|+++++ ..+..+++|++|+|++|+++++ ..+..+++|+.|++++|.+++
T Consensus 92 L~~N~l~~l~~--~~~-~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~--~~l~~l~~L~~L~L~~N~i~~ 164 (263)
T 1xeu_A 92 VNRNRLKNLNG--IPS-ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSI--VMLGFLSKLEVLDLHGNEITN 164 (263)
T ss_dssp CCSSCCSCCTT--CCC-SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBC--GGGGGCTTCCEEECTTSCCCB
T ss_pred CCCCccCCcCc--ccc-CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCCC--hHHccCCCCCEEECCCCcCcc
Confidence 77777664432 222 6666666666666654 2466666666666666666654 246666666666666666654
Q ss_pred CCCCccccCCCccEEEecCccCcCC
Q 004268 178 PIPSTLYHLNQLATLCLGYNKLVGP 202 (764)
Q Consensus 178 ~~~~~~~~l~~L~~L~l~~n~i~~~ 202 (764)
+ ..+..+++|+.|++++|.+...
T Consensus 165 ~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 165 T--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp C--TTSTTCCCCCEEEEEEEEEECC
T ss_pred h--HHhccCCCCCEEeCCCCcccCC
Confidence 4 4455555566666665555543
No 374
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.78 E-value=1.8e-19 Score=181.75 Aligned_cols=126 Identities=24% Similarity=0.341 Sum_probs=55.4
Q ss_pred ccCCCccEEEecCccCcCCcccccCCccccceeeccCcccccccCccccCCCCCCEEEccCCcccCCCCcCCcCCCCCCe
Q 004268 184 YHLNQLATLCLGYNKLVGPVTKEVGNMKNLDRLHLNGNNLTGSIPSTIGYLNLLDELHLSHNRLDGPIPPTIGNLTNLIA 263 (764)
Q Consensus 184 ~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 263 (764)
..+++|+.|++++|++..+.+ +..+++|++|++++|++++..+ +.. ++|+.|+|++|.+++. ..+..+++|+.
T Consensus 60 ~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~N~l~~l~~--~~~-~~L~~L~L~~N~l~~~--~~l~~l~~L~~ 132 (263)
T 1xeu_A 60 QFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVNRNRLKNLNG--IPS-ACLSRLFLDNNELRDT--DSLIHLKNLEI 132 (263)
T ss_dssp GGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCSSCCSCCTT--CCC-SSCCEEECCSSCCSBS--GGGTTCTTCCE
T ss_pred hhCCCCCEEECCCCccCCChh--hccCCCCCEEECCCCccCCcCc--ccc-CcccEEEccCCccCCC--hhhcCcccccE
Confidence 333334444444443333322 3344444444444444443211 111 4444455555544432 23444555555
Q ss_pred EEccCCcccCCCCccccCCCCCCeEeccCccccCCCCCCCCCCCccceEEccCCcCc
Q 004268 264 LDLSSNQLSGLLPREVGNLKYLASLSLNGNILIGPIPPTIGYLTNLTYLNLGYNRLS 320 (764)
Q Consensus 264 L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~ 320 (764)
|+|++|+++++ ..+..+++|+.|++++|++.+. ..+..+++|+.|++++|+++
T Consensus 133 L~Ls~N~i~~~--~~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~ 185 (263)
T 1xeu_A 133 LSIRNNKLKSI--VMLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCV 185 (263)
T ss_dssp EECTTSCCCBC--GGGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEE
T ss_pred EECCCCcCCCC--hHHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCccc
Confidence 55555555433 1344455555555555555443 33444555555555555554
No 375
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.78 E-value=1e-18 Score=168.20 Aligned_cols=152 Identities=16% Similarity=0.246 Sum_probs=72.6
Q ss_pred ccCCCeeEEEeCCCCccccCCccccCCCCCcEEEcCCCcCcccCCccccCCCCCCEEEccCCcCcccCCcccCCCCCCCE
Q 004268 16 TCFPNLVTFRIWGTLLSGRMPSEIGALSKLEKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLD 95 (764)
Q Consensus 16 ~~~~~l~~L~l~~~~~~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~ 95 (764)
..+++|+.|++++|.++ .+| .+..+++|++|++++|.++. +..+..+++|++|++++|++++..+..|..+++|++
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~~--~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~ 116 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHATN--YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTL 116 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCSC--CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCE
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCCc--chhhhcCCCCCEEEeECCccCcccChhhcCCCCCCE
Confidence 34445555555555554 233 34455555555555554432 124445555555555555555444444555555555
Q ss_pred EecCCCcccccCCccCcCCCCCCEEEccCCc-CcccCCccccCCCCcCEEecccCcccccCCccccCCCCCCeeecccCC
Q 004268 96 LNLSNNILNGSIPLEFGNLKDLDQLRLQGNK-LDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNLKSLFLDNNH 174 (764)
Q Consensus 96 L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~-l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 174 (764)
|+|++|.+++..+..|..+++|++|+|++|. ++.+ + .+..+++|++|++++|+++++. .+.++++|++|++++|+
T Consensus 117 L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~-~-~l~~l~~L~~L~l~~n~i~~~~--~l~~l~~L~~L~l~~N~ 192 (197)
T 4ezg_A 117 LDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDI-M-PLKTLPELKSLNIQFDGVHDYR--GIEDFPKLNQLYAFSQT 192 (197)
T ss_dssp EECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCC-G-GGGGCSSCCEEECTTBCCCCCT--TGGGCSSCCEEEECBC-
T ss_pred EEecCCccCcHhHHHHhhCCCCCEEEccCCCCcccc-H-hhcCCCCCCEEECCCCCCcChH--HhccCCCCCEEEeeCcc
Confidence 5555555544444444555555555555554 4433 1 3444555555555555554322 44445555555555554
Q ss_pred C
Q 004268 175 L 175 (764)
Q Consensus 175 i 175 (764)
+
T Consensus 193 i 193 (197)
T 4ezg_A 193 I 193 (197)
T ss_dssp -
T ss_pred c
Confidence 4
No 376
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.76 E-value=1.6e-18 Score=165.75 Aligned_cols=156 Identities=21% Similarity=0.231 Sum_probs=77.4
Q ss_pred CCCeEEccCCcccCCCCc-cccCCCCCCeEeccCccccCCCCCCCCCCCccceEEccCCcCccCCChhhhcccccceeec
Q 004268 260 NLIALDLSSNQLSGLLPR-EVGNLKYLASLSLNGNILIGPIPPTIGYLTNLTYLNLGYNRLSSSIPPELMNCSQLLNLVL 338 (764)
Q Consensus 260 ~L~~L~L~~n~l~~~~~~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l 338 (764)
+|+.|+|++|.++++.+. .|..+++|+.|+|++|++++..|..|..+++|++|+|++|+|++..+..|.++++|++|+|
T Consensus 30 ~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 109 (192)
T 1w8a_A 30 HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNL 109 (192)
T ss_dssp TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEEC
T ss_pred CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEEC
Confidence 445555555555443332 2444555555555555555444445555555555555555555444444555555555555
Q ss_pred cccccccCCchhcccccccceeecccccccCCCCCCCCCCCccceecCCCCccccccCCccccCccccccCCCCCCCC
Q 004268 339 SHNSLSGSIPSEIGNLIFFRQLDLSRNFINGTIPSQLGKIPNISAVDLSKNNLSGVIPASVRRIPKLIVSENNLELEN 416 (764)
Q Consensus 339 s~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~n~~~~~~ 416 (764)
++|++++..|..+..+++|+.|+|++|++++..+... -...++...+.++...+..|..+...+-..+..+.+.|..
T Consensus 110 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~-~~~~l~~~~~~~~~~~C~~P~~l~~~~l~~l~~~~~~C~~ 186 (192)
T 1w8a_A 110 YDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAW-FAEWLRKKSLNGGAARCGAPSKVRDVQIKDLPHSEFKCSS 186 (192)
T ss_dssp CSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHH-HHHHHHHHCCSGGGCBBCSSTTTTTSBGGGSCTTTCCCCC
T ss_pred CCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchH-HHHHHHHcCCCCCCCCCCCChHHcCCChhhCcHhhcCcCC
Confidence 5555554445555555555555555555543322110 0011222334455555666666666666666666665553
No 377
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.76 E-value=8.9e-21 Score=211.81 Aligned_cols=187 Identities=27% Similarity=0.277 Sum_probs=99.8
Q ss_pred CCCCcCEEecccCcccccCCccccCCCCCCeeecccCC-------------CCCCCCCccccCCCccEEE-ecCccCcCC
Q 004268 137 NLTNLTYLDLSLNQLSGRLPQEVGNLKNLKSLFLDNNH-------------LSGPIPSTLYHLNQLATLC-LGYNKLVGP 202 (764)
Q Consensus 137 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~-------------i~~~~~~~~~~l~~L~~L~-l~~n~i~~~ 202 (764)
.+++|+.|+|++|+++ ..|..+.++++|+.|++++|. +.+..+..+..+++|+.|+ ++.|.+
T Consensus 347 ~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~--- 422 (567)
T 1dce_A 347 TDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYL--- 422 (567)
T ss_dssp TTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHH---
T ss_pred cCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhccc---
Confidence 3445555555555554 334445555555555554332 2223334445555555554 343322
Q ss_pred cccccCCccccceeeccCcccccccCccccCCCCCCEEEccCCcccCCCCcCCcCCCCCCeEEccCCcccCCCCccccCC
Q 004268 203 VTKEVGNMKNLDRLHLNGNNLTGSIPSTIGYLNLLDELHLSHNRLDGPIPPTIGNLTNLIALDLSSNQLSGLLPREVGNL 282 (764)
Q Consensus 203 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 282 (764)
..|+.+.+++|.++...+ ..|+.|+|++|.|++ +|. |+.+++|+.|+|++|.|+ ..|..+.++
T Consensus 423 --------~~L~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l 485 (567)
T 1dce_A 423 --------DDLRSKFLLENSVLKMEY------ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAAL 485 (567)
T ss_dssp --------HHHHHHHHHHHHHHHHHH------TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGC
T ss_pred --------chhhhhhhhcccccccCc------cCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcC
Confidence 234445555555553222 136666666666664 333 666666666666666666 345566666
Q ss_pred CCCCeEeccCccccCCCCCCCCCCCccceEEccCCcCccCC-ChhhhcccccceeeccccccccC
Q 004268 283 KYLASLSLNGNILIGPIPPTIGYLTNLTYLNLGYNRLSSSI-PPELMNCSQLLNLVLSHNSLSGS 346 (764)
Q Consensus 283 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~-~~~~~~l~~L~~L~ls~N~l~~~ 346 (764)
++|+.|+|++|+|++ +| .++.+++|+.|+|++|+|++.. |..+..+++|+.|+|++|++++.
T Consensus 486 ~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~ 548 (567)
T 1dce_A 486 RCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQE 548 (567)
T ss_dssp TTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGS
T ss_pred CCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCC
Confidence 666666666666654 33 5555666666666666666443 55566666666666666666543
No 378
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.75 E-value=2.5e-18 Score=172.69 Aligned_cols=142 Identities=22% Similarity=0.264 Sum_probs=108.0
Q ss_pred cCCcceeeeecCceeEEEEEE-CCCCE--EEEEEccCCCCC---------------------cHHHHHHHHHHHHHHHhc
Q 004268 509 DFHIKYCIGTGGYGSVYRAQL-SSGKL--VALKKLHRSETE---------------------EPAFLESFQTEARLLSQI 564 (764)
Q Consensus 509 ~y~~~~~ig~G~~g~V~~~~~-~~~~~--vavK~~~~~~~~---------------------~~~~~~~~~~E~~~l~~l 564 (764)
-|.+.+.||+|+||.||+|.. .+|+. ||||++...... .......+.+|+++++++
T Consensus 48 ~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 127 (258)
T 1zth_A 48 ITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERA 127 (258)
T ss_dssp EEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHH
T ss_pred chhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHH
Confidence 467889999999999999987 67989 999987543211 011224678999999999
Q ss_pred CCCce--eeEeeEEeeCCEEEEEEEecCC-C----CHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEc
Q 004268 565 RHRNI--VKLYGFCLHNKCMFLIYEYMER-G----SLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHR 637 (764)
Q Consensus 565 ~hpni--v~~~~~~~~~~~~~lv~e~~~~-~----~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~ 637 (764)
.|+++ +.++++ +..++||||+.+ | +|.+.... .++..+..++.|++.|+.|||. +.||+||
T Consensus 128 ~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~------~~~~~~~~i~~qi~~~l~~lH~--~~givHr 195 (258)
T 1zth_A 128 KEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE------LKELDVEGIFNDVVENVKRLYQ--EAELVHA 195 (258)
T ss_dssp HHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG------GGGSCHHHHHHHHHHHHHHHHH--TSCEECS
T ss_pred HhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc------cChHHHHHHHHHHHHHHHHHHH--HCCEEeC
Confidence 88753 444443 245899999942 3 66665431 2244667899999999999994 4599999
Q ss_pred CCCCCCeeecCCCCEEEeeeccccccC
Q 004268 638 DISSNNILLNSNLEAFVADFGLARLLH 664 (764)
Q Consensus 638 Dlkp~NIll~~~~~~kl~Dfg~~~~~~ 664 (764)
||||+|||++. .++|+|||+|....
T Consensus 196 Dlkp~NILl~~--~~~liDFG~a~~~~ 220 (258)
T 1zth_A 196 DLSEYNIMYID--KVYFIDMGQAVTLR 220 (258)
T ss_dssp SCSTTSEEESS--SEEECCCTTCEETT
T ss_pred CCCHHHEEEcC--cEEEEECcccccCC
Confidence 99999999998 99999999997653
No 379
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.73 E-value=1.5e-20 Score=209.92 Aligned_cols=204 Identities=24% Similarity=0.197 Sum_probs=150.8
Q ss_pred cCCCCCCEEEccCCcCcccCCccccCCCCcCEEecccCc-------------ccccCCccccCCCCCCeee-cccCCCCC
Q 004268 112 GNLKDLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLSLNQ-------------LSGRLPQEVGNLKNLKSLF-LDNNHLSG 177 (764)
Q Consensus 112 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~-------------l~~~~~~~~~~l~~L~~L~-L~~n~i~~ 177 (764)
..+++|+.|+|++|+++. .|..++++++|+.|++++|. +.+..|..+.++++|+.|+ ++.|.+
T Consensus 346 ~~~~~L~~L~Ls~n~L~~-Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~-- 422 (567)
T 1dce_A 346 ATDEQLFRCELSVEKSTV-LQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYL-- 422 (567)
T ss_dssp STTTTSSSCCCCHHHHHH-HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHH--
T ss_pred ccCccceeccCChhhHHh-hHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhccc--
Confidence 456677777777777763 36667777777777776654 4455667778888888888 666643
Q ss_pred CCCCccccCCCccEEEecCccCcCCcccccCCccccceeeccCcccccccCccccCCCCCCEEEccCCcccCCCCcCCcC
Q 004268 178 PIPSTLYHLNQLATLCLGYNKLVGPVTKEVGNMKNLDRLHLNGNNLTGSIPSTIGYLNLLDELHLSHNRLDGPIPPTIGN 257 (764)
Q Consensus 178 ~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 257 (764)
..|..+.+++|.+..+.. ..|+.|+|++|.++++ |. +..+++|+.|+|++|.|+ .+|..|+.
T Consensus 423 ---------~~L~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~~l-p~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~ 484 (567)
T 1dce_A 423 ---------DDLRSKFLLENSVLKMEY------ADVRVLHLAHKDLTVL-CH-LEQLLLVTHLDLSHNRLR-ALPPALAA 484 (567)
T ss_dssp ---------HHHHHHHHHHHHHHHHHH------TTCSEEECTTSCCSSC-CC-GGGGTTCCEEECCSSCCC-CCCGGGGG
T ss_pred ---------chhhhhhhhcccccccCc------cCceEEEecCCCCCCC-cC-ccccccCcEeecCccccc-ccchhhhc
Confidence 345556677777664432 2478888888888864 44 888888899999988888 66778888
Q ss_pred CCCCCeEEccCCcccCCCCccccCCCCCCeEeccCccccCCC-CCCCCCCCccceEEccCCcCccCCCh---hhhccccc
Q 004268 258 LTNLIALDLSSNQLSGLLPREVGNLKYLASLSLNGNILIGPI-PPTIGYLTNLTYLNLGYNRLSSSIPP---ELMNCSQL 333 (764)
Q Consensus 258 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~-~~~~~~l~~L~~L~ls~N~l~~~~~~---~~~~l~~L 333 (764)
+++|+.|+|++|.|+++ | .+..+++|+.|+|++|++++.. |..+..+++|+.|+|++|++++..|. .+..+++|
T Consensus 485 l~~L~~L~Ls~N~l~~l-p-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L 562 (567)
T 1dce_A 485 LRCLEVLQASDNALENV-D-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSV 562 (567)
T ss_dssp CTTCCEEECCSSCCCCC-G-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTC
T ss_pred CCCCCEEECCCCCCCCC-c-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCccc
Confidence 88999999999988864 4 7888889999999999988776 88888899999999999998865432 22346677
Q ss_pred ceeec
Q 004268 334 LNLVL 338 (764)
Q Consensus 334 ~~L~l 338 (764)
+.|++
T Consensus 563 ~~L~l 567 (567)
T 1dce_A 563 SSILT 567 (567)
T ss_dssp SEEEC
T ss_pred CccCC
Confidence 77653
No 380
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.72 E-value=3.2e-17 Score=156.72 Aligned_cols=175 Identities=23% Similarity=0.277 Sum_probs=107.5
Q ss_pred ceeeccCcccccccCccccCCCCCCEEEccCCcccCCCCc-CCcCCCCCCeEEccCCcccCCCCccccCCCCCCeEeccC
Q 004268 214 DRLHLNGNNLTGSIPSTIGYLNLLDELHLSHNRLDGPIPP-TIGNLTNLIALDLSSNQLSGLLPREVGNLKYLASLSLNG 292 (764)
Q Consensus 214 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~-~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~ 292 (764)
+.+++++|.++. +|..+. .+|++|++++|.++++.+. .|..+++|++|+|++|+|+++.+..|.++++|+.|+|++
T Consensus 11 ~~l~~s~~~l~~-ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLKE-IPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCSS-CCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcCc-CccCCC--CCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 455666666653 233222 2566666666666655543 366677777777777777766666677777777777777
Q ss_pred ccccCCCCCCCCCCCccceEEccCCcCccCCChhhhcccccceeeccccccccCCchhcccccccceeecccccccCCCC
Q 004268 293 NILIGPIPPTIGYLTNLTYLNLGYNRLSSSIPPELMNCSQLLNLVLSHNSLSGSIPSEIGNLIFFRQLDLSRNFINGTIP 372 (764)
Q Consensus 293 n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 372 (764)
|++.+..+..|..+++|++|+|++|+|++..|..|..+++|++|+|++|++++..+.. .-...++...+..+...+..|
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~-~~~~~l~~~~~~~~~~~C~~P 166 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLA-WFAEWLRKKSLNGGAARCGAP 166 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGH-HHHHHHHHHCCSGGGCBBCSS
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcch-HHHHHHHHcCCCCCCCCCCCC
Confidence 7777666666777777777777777777666777777777777777777776543311 001123333445555555556
Q ss_pred CCCCCCCccceecCCCCcccccc
Q 004268 373 SQLGKIPNISAVDLSKNNLSGVI 395 (764)
Q Consensus 373 ~~~~~l~~L~~l~l~~N~l~~~~ 395 (764)
..+.+ ....++..+.+++..
T Consensus 167 ~~l~~---~~l~~l~~~~~~C~~ 186 (192)
T 1w8a_A 167 SKVRD---VQIKDLPHSEFKCSS 186 (192)
T ss_dssp TTTTT---SBGGGSCTTTCCCCC
T ss_pred hHHcC---CChhhCcHhhcCcCC
Confidence 55444 345567777776543
No 381
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.71 E-value=5e-18 Score=195.70 Aligned_cols=141 Identities=29% Similarity=0.346 Sum_probs=69.4
Q ss_pred ccccCCccccceeeccCcccccccCccccCCCCCCEEEccCCcccCCCCcCCcCCCCCCeEEccCCcccCCCCccccCCC
Q 004268 204 TKEVGNMKNLDRLHLNGNNLTGSIPSTIGYLNLLDELHLSHNRLDGPIPPTIGNLTNLIALDLSSNQLSGLLPREVGNLK 283 (764)
Q Consensus 204 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~ 283 (764)
+..|..++.|+.|+|++|.+. .++..+..+++|+.|+|++|.|+ .+|..|+.+++|+.|+|++|.|+ ..|..|.+++
T Consensus 217 ~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~ 293 (727)
T 4b8c_D 217 KDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCF 293 (727)
T ss_dssp -----CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGT
T ss_pred hhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCC
Confidence 444555555555555555555 23333335555555555555555 44445555555555555555555 3344555555
Q ss_pred CCCeEeccCccccCCCCCCCCCCCccceEEccCCcCccCCChhhhcccc-cceeeccccccccCCc
Q 004268 284 YLASLSLNGNILIGPIPPTIGYLTNLTYLNLGYNRLSSSIPPELMNCSQ-LLNLVLSHNSLSGSIP 348 (764)
Q Consensus 284 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~-L~~L~ls~N~l~~~~~ 348 (764)
+|+.|+|++|.|. .+|..|+.+++|++|+|++|.|++.+|..+..+.. +..|+|++|.+++.+|
T Consensus 294 ~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p 358 (727)
T 4b8c_D 294 QLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLP 358 (727)
T ss_dssp TCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_pred CCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCc
Confidence 5555555555554 33444555555555555555555444444433221 1234555555554444
No 382
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.71 E-value=2e-17 Score=154.68 Aligned_cols=132 Identities=25% Similarity=0.278 Sum_probs=68.1
Q ss_pred CCCcEEEcCCCcCc-ccCCccccCCCCCCEEEccCCcCcccCCcccCCCCCCCEEecCCCcccccCCccCcCCCCCCEEE
Q 004268 43 SKLEKLVLSHNSLT-GRIPSEIGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLDLNLSNNILNGSIPLEFGNLKDLDQLR 121 (764)
Q Consensus 43 ~~L~~L~Ls~n~i~-~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 121 (764)
++|++|++++|.++ +.+|..+..+++|++|+|++|.|+.. ..+..+++|++|+|++|.+++..+..+..+++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 44555555555554 33444445555555555555555533 4455555555555555555544444444455555555
Q ss_pred ccCCcCcccCC-ccccCCCCcCEEecccCcccccCC---ccccCCCCCCeeecccCCCC
Q 004268 122 LQGNKLDGLIP-SSIGNLTNLTYLDLSLNQLSGRLP---QEVGNLKNLKSLFLDNNHLS 176 (764)
Q Consensus 122 L~~n~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~---~~~~~l~~L~~L~L~~n~i~ 176 (764)
|++|.++++.. ..+..+++|++|++++|+++++.+ ..|..+++|++|++++|.+.
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 55555554322 445555555555555555554433 34555555555555555554
No 383
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.70 E-value=3.8e-17 Score=152.81 Aligned_cols=135 Identities=27% Similarity=0.249 Sum_probs=89.5
Q ss_pred CCCeeEEEeCCCCcc-ccCCccccCCCCCcEEEcCCCcCcccCCccccCCCCCCEEEccCCcCcccCCcccCCCCCCCEE
Q 004268 18 FPNLVTFRIWGTLLS-GRMPSEIGALSKLEKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLDL 96 (764)
Q Consensus 18 ~~~l~~L~l~~~~~~-~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L 96 (764)
+++|+.|++++|.++ +.+|..+..+++|++|++++|.+++. ..|..+++|++|+|++|++++..|..+..+++|++|
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 356777777777765 56666666677777777777777654 566667777777777777765566666666777777
Q ss_pred ecCCCcccccCC-ccCcCCCCCCEEEccCCcCcccCC---ccccCCCCcCEEecccCccccc
Q 004268 97 NLSNNILNGSIP-LEFGNLKDLDQLRLQGNKLDGLIP---SSIGNLTNLTYLDLSLNQLSGR 154 (764)
Q Consensus 97 ~L~~n~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~---~~~~~l~~L~~L~L~~n~l~~~ 154 (764)
+|++|.++++.. ..|..+++|++|++++|.++++++ ..|..+++|++|++++|.+..+
T Consensus 101 ~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~ 162 (168)
T 2ell_A 101 NLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQEA 162 (168)
T ss_dssp ECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCBC
T ss_pred eccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChhhc
Confidence 777777765432 556667777777777777766554 4566677777777777766533
No 384
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.69 E-value=1.7e-16 Score=151.68 Aligned_cols=127 Identities=27% Similarity=0.333 Sum_probs=72.4
Q ss_pred cEEEcCCCcCcccCCccccCCCCCCEEEccCCcCcccCCcccCCCCCCCEEecCCCcccccCCccCcCCCCCCEEEccCC
Q 004268 46 EKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLDLNLSNNILNGSIPLEFGNLKDLDQLRLQGN 125 (764)
Q Consensus 46 ~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 125 (764)
+.+++++|.++ .+|..+. ++|++|+|++|+|+ .+|..|..+++|++|+|++|.|+++.+.+|.++++|++|+|++|
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 34555555555 2333332 35555666666555 34455555566666666666665555555666666666666666
Q ss_pred cCcccCCccccCCCCcCEEecccCcccccCCccccCCCCCCeeecccCCCC
Q 004268 126 KLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNLKSLFLDNNHLS 176 (764)
Q Consensus 126 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~ 176 (764)
+|+++.+..|.++++|++|+|++|+++.+.+..|..+++|+.|+|++|.+.
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLY 139 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEE
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCee
Confidence 666555555666666666666666665555555666666666666666553
No 385
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.69 E-value=1.7e-16 Score=151.56 Aligned_cols=127 Identities=29% Similarity=0.410 Sum_probs=90.8
Q ss_pred eEEEeCCCCccccCCccccCCCCCcEEEcCCCcCcccCCccccCCCCCCEEEccCCcCcccCCcccCCCCCCCEEecCCC
Q 004268 22 VTFRIWGTLLSGRMPSEIGALSKLEKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLDLNLSNN 101 (764)
Q Consensus 22 ~~L~l~~~~~~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n 101 (764)
+.+++++++++ .+|..+. ++|++|+|++|+|+ .+|..|..+++|++|+|++|.|++..+.+|.++++|++|+|++|
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 46777777776 4555443 46777777777776 45567777777777777777777666667777777777777777
Q ss_pred cccccCCccCcCCCCCCEEEccCCcCcccCCccccCCCCcCEEecccCccc
Q 004268 102 ILNGSIPLEFGNLKDLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLSLNQLS 152 (764)
Q Consensus 102 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 152 (764)
.|+++.+.+|.++++|++|+|++|.++.+++..|..+++|+.|+|++|.+.
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLY 139 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEE
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCee
Confidence 777777777777777777777777777766666777777777777777765
No 386
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.69 E-value=1.1e-17 Score=192.93 Aligned_cols=163 Identities=23% Similarity=0.201 Sum_probs=123.5
Q ss_pred eeccCcccccccCccccCCCCCCEEEccCCcccCCCCcCCcCCCCCCeEEccCCcccCCCCccccCCCCCCeEeccCccc
Q 004268 216 LHLNGNNLTGSIPSTIGYLNLLDELHLSHNRLDGPIPPTIGNLTNLIALDLSSNQLSGLLPREVGNLKYLASLSLNGNIL 295 (764)
Q Consensus 216 L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 295 (764)
+++..|.+. ..+..+..++.|+.|+|++|.+. .+|..+..+++|+.|+|++|.|+ ..|..|.++++|+.|+|++|+|
T Consensus 206 ~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l 282 (727)
T 4b8c_D 206 DDDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRL 282 (727)
T ss_dssp -----------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCC
T ss_pred cccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcC
Confidence 345556665 67888999999999999999999 56666779999999999999999 6788899999999999999999
Q ss_pred cCCCCCCCCCCCccceEEccCCcCccCCChhhhcccccceeeccccccccCCchhcccccc-cceeecccccccCCCCCC
Q 004268 296 IGPIPPTIGYLTNLTYLNLGYNRLSSSIPPELMNCSQLLNLVLSHNSLSGSIPSEIGNLIF-FRQLDLSRNFINGTIPSQ 374 (764)
Q Consensus 296 ~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~-L~~L~l~~N~l~~~~~~~ 374 (764)
+ .+|..|..+++|++|+|++|.|+ .+|..|..+++|+.|+|++|+|++.+|..+..+.. +..|+|++|.+++.+|..
T Consensus 283 ~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~ 360 (727)
T 4b8c_D 283 T-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE 360 (727)
T ss_dssp S-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_pred C-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccc
Confidence 8 66889999999999999999998 67888999999999999999999988888866533 345899999999888765
Q ss_pred CCCCCccceecCCCC
Q 004268 375 LGKIPNISAVDLSKN 389 (764)
Q Consensus 375 ~~~l~~L~~l~l~~N 389 (764)
|+.|++++|
T Consensus 361 ------l~~l~l~~n 369 (727)
T 4b8c_D 361 ------RRFIEINTD 369 (727)
T ss_dssp ---------------
T ss_pred ------cceeEeecc
Confidence 455667777
No 387
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.68 E-value=3.3e-15 Score=160.34 Aligned_cols=330 Identities=8% Similarity=0.067 Sum_probs=157.1
Q ss_pred ccccCCC-CCcEEEcCCCcCcccCCccccCCCCCCEEEccCCc---CcccCCcccCCCCCCCEEecCCCcccccCCccCc
Q 004268 37 SEIGALS-KLEKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNR---LTGTIPSEIGSLRDLLDLNLSNNILNGSIPLEFG 112 (764)
Q Consensus 37 ~~~~~l~-~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~---i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 112 (764)
.+|.+++ .|+.+.+-.+ ++.+...+|.++++|+.+.++.|. ++.+...+|..+.+|+.+.+.++ ++.+...+|.
T Consensus 57 ~aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~ 134 (394)
T 4gt6_A 57 RVFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAFH 134 (394)
T ss_dssp TTTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTTT
T ss_pred hhccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhhh
Confidence 3444443 3555555533 444555556666666666555543 44444455555555555555443 3335555555
Q ss_pred CCCCCCEEEccCCcCcccCCccccCCCCcCEEecccCcccccCCccccCCCCCCeeecccCCCCCCCCCccccCCCccEE
Q 004268 113 NLKDLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNLKSLFLDNNHLSGPIPSTLYHLNQLATL 192 (764)
Q Consensus 113 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L 192 (764)
++.+|+.+.+..+ +..+...+|.++.+|+.+.+..+ ++.+...+|.+ .+|+.+.+..+-.. +...+|..+.+++..
T Consensus 135 ~c~~L~~i~lp~~-~~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~~-~~l~~i~ip~~~~~-i~~~af~~c~~l~~~ 210 (394)
T 4gt6_A 135 HCEELDTVTIPEG-VTSVADGMFSYCYSLHTVTLPDS-VTAIEERAFTG-TALTQIHIPAKVTR-IGTNAFSECFALSTI 210 (394)
T ss_dssp TCTTCCEEECCTT-CCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTT-CCCSEEEECTTCCE-ECTTTTTTCTTCCEE
T ss_pred hhcccccccccce-eeeecccceecccccccccccce-eeEeccccccc-cceeEEEECCcccc-cccchhhhcccccee
Confidence 5556666555432 33345555555555665555443 33344555543 34555555443322 444555555555555
Q ss_pred EecCccCcCCcccccCCccccceeeccCcccccccCccccCCCCCCEEEccCCcccCCCCcCCcCCCCCCeEEccCCccc
Q 004268 193 CLGYNKLVGPVTKEVGNMKNLDRLHLNGNNLTGSIPSTIGYLNLLDELHLSHNRLDGPIPPTIGNLTNLIALDLSSNQLS 272 (764)
Q Consensus 193 ~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 272 (764)
....+.........+....... .....+.....+..+.+.. .+..+...+|.++.+|+.+.+.++...
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~ip~-~v~~i~~~aF~~c~~L~~i~lp~~~~~ 278 (394)
T 4gt6_A 211 TSDSESYPAIDNVLYEKSANGD-----------YALIRYPSQREDPAFKIPN-GVARIETHAFDSCAYLASVKMPDSVVS 278 (394)
T ss_dssp EECCSSSCBSSSCEEEECTTSC-----------EEEEECCTTCCCSEEECCT-TEEEECTTTTTTCSSCCEEECCTTCCE
T ss_pred cccccccccccceeeccccccc-----------ccccccccccccceEEcCC-cceEcccceeeecccccEEecccccce
Confidence 5444433221111111000000 0000011122233333332 223244455666666666666544433
Q ss_pred CCCCccccCCCCCCeEeccCccccCCCCCCCCCCCccceEEccCCcCccCCChhhhcccccceeeccccccccCCchhcc
Q 004268 273 GLLPREVGNLKYLASLSLNGNILIGPIPPTIGYLTNLTYLNLGYNRLSSSIPPELMNCSQLLNLVLSHNSLSGSIPSEIG 352 (764)
Q Consensus 273 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~ 352 (764)
+...+|.++.+|+.+.+. +.+..+...+|..+.+|+.++|..+ ++.+...+|.++.+|+.+.|..+ ++.+....|.
T Consensus 279 -I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~ 354 (394)
T 4gt6_A 279 -IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFS 354 (394)
T ss_dssp -ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGT
T ss_pred -ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhh
Confidence 455556666666666664 3334444455666666666666543 44345556666666666666443 5545555666
Q ss_pred cccccceeecccccccCCCCCCCCCCCccceecCCCCcc
Q 004268 353 NLIFFRQLDLSRNFINGTIPSQLGKIPNISAVDLSKNNL 391 (764)
Q Consensus 353 ~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l 391 (764)
++.+|+.+++.+|.... ..+....+|+.+.+..|.+
T Consensus 355 ~C~~L~~i~~~~~~~~~---~~~~~~~~L~~i~i~~~~~ 390 (394)
T 4gt6_A 355 NCTALNNIEYSGSRSQW---NAISTDSGLQNLPVAPGSI 390 (394)
T ss_dssp TCTTCCEEEESSCHHHH---HTCBCCCCC----------
T ss_pred CCCCCCEEEECCceeeh---hhhhccCCCCEEEeCCCCE
Confidence 66666666666655431 2344455566666555543
No 388
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.68 E-value=4.4e-17 Score=149.00 Aligned_cols=128 Identities=25% Similarity=0.283 Sum_probs=70.7
Q ss_pred CCCeeEEEeCCCCcc-ccCCccccCCCCCcEEEcCCCcCcccCCccccCCCCCCEEEccCCcCcccCCcccCCCCCCCEE
Q 004268 18 FPNLVTFRIWGTLLS-GRMPSEIGALSKLEKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLDL 96 (764)
Q Consensus 18 ~~~l~~L~l~~~~~~-~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L 96 (764)
+++++.|++++|.++ +.+|..+..+++|++|++++|.+++. ..+..+++|++|+|++|.+++.+|..+..+++|++|
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 355666666666665 45555555666666666666666543 445555666666666666554455555555555555
Q ss_pred ecCCCcccccC-CccCcCCCCCCEEEccCCcCcccCC---ccccCCCCcCEEecc
Q 004268 97 NLSNNILNGSI-PLEFGNLKDLDQLRLQGNKLDGLIP---SSIGNLTNLTYLDLS 147 (764)
Q Consensus 97 ~L~~n~l~~~~-~~~~~~l~~L~~L~L~~n~l~~~~~---~~~~~l~~L~~L~L~ 147 (764)
+|++|.++++. +..+..+++|++|++++|.++++++ ..+..+++|+.|+++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 55555555431 2445555555555555555554443 345555555555544
No 389
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.67 E-value=8e-17 Score=167.20 Aligned_cols=140 Identities=12% Similarity=0.155 Sum_probs=102.9
Q ss_pred cCCcceeeeecCceeEEEEEECCCCEEEEEEccCCCCC---------------cHHH----HHHHHHHHHHHHhcCCCce
Q 004268 509 DFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETE---------------EPAF----LESFQTEARLLSQIRHRNI 569 (764)
Q Consensus 509 ~y~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~---------------~~~~----~~~~~~E~~~l~~l~hpni 569 (764)
-|.+.+.||+|++|.||+|...+|+.||||+++..... .... .....+|...+.++.+.++
T Consensus 96 iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv 175 (397)
T 4gyi_A 96 VYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGF 175 (397)
T ss_dssp CSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 39999999999999999999889999999987542110 0000 1123467777777754443
Q ss_pred --eeEeeEEeeCCEEEEEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeec
Q 004268 570 --VKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLN 647 (764)
Q Consensus 570 --v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~ 647 (764)
+..+++ .. .++||||++|+++..+.. . .....++.|++.++.++| ++|||||||||.|||++
T Consensus 176 ~vp~p~~~--~~--~~LVME~i~G~~L~~l~~-------~--~~~~~l~~qll~~l~~lH---~~gIVHrDLKp~NILl~ 239 (397)
T 4gyi_A 176 PVPEPIAQ--SR--HTIVMSLVDALPMRQVSS-------V--PDPASLYADLIALILRLA---KHGLIHGDFNEFNILIR 239 (397)
T ss_dssp SCCCEEEE--ET--TEEEEECCSCEEGGGCCC-------C--SCHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEEE
T ss_pred CCCeeeec--cC--ceEEEEecCCccHhhhcc-------c--HHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHEEEe
Confidence 233322 22 369999999988765432 1 234568899999999999 88999999999999998
Q ss_pred CCCC----------EEEeeeccccccC
Q 004268 648 SNLE----------AFVADFGLARLLH 664 (764)
Q Consensus 648 ~~~~----------~kl~Dfg~~~~~~ 664 (764)
+++. +.|+||+-+....
T Consensus 240 ~dgd~~d~~~~~~~~~iID~~Q~V~~~ 266 (397)
T 4gyi_A 240 EEKDAEDPSSITLTPIIIXFPQMVSMD 266 (397)
T ss_dssp EEECSSCTTSEEEEEEECCCTTCEETT
T ss_pred CCCCcccccccccceEEEEeCCcccCC
Confidence 7763 8999999887643
No 390
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.67 E-value=4.7e-15 Score=159.15 Aligned_cols=335 Identities=10% Similarity=0.078 Sum_probs=240.7
Q ss_pred cccccccccC-CCeeEEEeCCCCccccCCccccCCCCCcEEEcCCCc---CcccCCccccCCCCCCEEEccCCcCcccCC
Q 004268 9 ELSQLNFTCF-PNLVTFRIWGTLLSGRMPSEIGALSKLEKLVLSHNS---LTGRIPSEIGALSRLKVLDLSYNRLTGTIP 84 (764)
Q Consensus 9 ~~~~~~~~~~-~~l~~L~l~~~~~~~~~~~~~~~l~~L~~L~Ls~n~---i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~ 84 (764)
+|....|.+. ..|+.+.+-.+ ++.+-..+|.+|.+|+.+.++.|. ++.+...+|.++.+|+.+.+..+ ++.+..
T Consensus 53 ~Ig~~aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~ 130 (394)
T 4gt6_A 53 KIGDRVFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDS 130 (394)
T ss_dssp EECTTTTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECT
T ss_pred EcCHhhccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehh
Confidence 4566778876 46999999765 777888999999999999998774 77778889999999999998876 555777
Q ss_pred cccCCCCCCCEEecCCCcccccCCccCcCCCCCCEEEccCCcCcccCCccccCCCCcCEEecccCcccccCCccccCCCC
Q 004268 85 SEIGSLRDLLDLNLSNNILNGSIPLEFGNLKDLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKN 164 (764)
Q Consensus 85 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 164 (764)
.+|..+.+|+.+.+..+. ..+...+|..+.+|+.+.+..+ +..+...+|.+ .+|+.+.+..+-.. +...+|.++.+
T Consensus 131 ~aF~~c~~L~~i~lp~~~-~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~~-~~l~~i~ip~~~~~-i~~~af~~c~~ 206 (394)
T 4gt6_A 131 EAFHHCEELDTVTIPEGV-TSVADGMFSYCYSLHTVTLPDS-VTAIEERAFTG-TALTQIHIPAKVTR-IGTNAFSECFA 206 (394)
T ss_dssp TTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCEEECCTT-CCEECTTTTTT-CCCSEEEECTTCCE-ECTTTTTTCTT
T ss_pred hhhhhhccccccccccee-eeecccceecccccccccccce-eeEeccccccc-cceeEEEECCcccc-cccchhhhccc
Confidence 899999999999998654 4588899999999999999765 66677788876 67999999876554 78889999999
Q ss_pred CCeeecccCCCCCCCCCccccCCCccEEEecCccCcCCcccccCCccccceeeccCcccccccCccccCCCCCCEEEccC
Q 004268 165 LKSLFLDNNHLSGPIPSTLYHLNQLATLCLGYNKLVGPVTKEVGNMKNLDRLHLNGNNLTGSIPSTIGYLNLLDELHLSH 244 (764)
Q Consensus 165 L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 244 (764)
++......+....+....+........- ...+.....+..+.+. +.++.+...+|..+..|+.+.+..
T Consensus 207 l~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~ip-~~v~~i~~~aF~~c~~L~~i~lp~ 274 (394)
T 4gt6_A 207 LSTITSDSESYPAIDNVLYEKSANGDYA-----------LIRYPSQREDPAFKIP-NGVARIETHAFDSCAYLASVKMPD 274 (394)
T ss_dssp CCEEEECCSSSCBSSSCEEEECTTSCEE-----------EEECCTTCCCSEEECC-TTEEEECTTTTTTCSSCCEEECCT
T ss_pred cceecccccccccccceeeccccccccc-----------ccccccccccceEEcC-CcceEcccceeeecccccEEeccc
Confidence 9999887776653322222221111111 1112223344445554 334446667788888888888876
Q ss_pred CcccCCCCcCCcCCCCCCeEEccCCcccCCCCccccCCCCCCeEeccCccccCCCCCCCCCCCccceEEccCCcCccCCC
Q 004268 245 NRLDGPIPPTIGNLTNLIALDLSSNQLSGLLPREVGNLKYLASLSLNGNILIGPIPPTIGYLTNLTYLNLGYNRLSSSIP 324 (764)
Q Consensus 245 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~ 324 (764)
+... +...+|.++++|+.+.+. +.+..+...+|.++.+|+.+.+..+ ++.+...+|..+.+|+.+.+..+ ++.+..
T Consensus 275 ~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~ 350 (394)
T 4gt6_A 275 SVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPE 350 (394)
T ss_dssp TCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCG
T ss_pred ccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhH
Confidence 6554 666788888888888885 4555577778888888888888765 55566678888888888888655 665667
Q ss_pred hhhhcccccceeeccccccccCCchhcccccccceeeccccccc
Q 004268 325 PELMNCSQLLNLVLSHNSLSGSIPSEIGNLIFFRQLDLSRNFIN 368 (764)
Q Consensus 325 ~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 368 (764)
.+|.++.+|+.+++.+|.... ..+.....|+.+.+..|.+.
T Consensus 351 ~aF~~C~~L~~i~~~~~~~~~---~~~~~~~~L~~i~i~~~~~~ 391 (394)
T 4gt6_A 351 SAFSNCTALNNIEYSGSRSQW---NAISTDSGLQNLPVAPGSID 391 (394)
T ss_dssp GGGTTCTTCCEEEESSCHHHH---HTCBCCCCC-----------
T ss_pred hHhhCCCCCCEEEECCceeeh---hhhhccCCCCEEEeCCCCEE
Confidence 788888899999988886541 45667778888888777653
No 391
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.67 E-value=9e-17 Score=146.94 Aligned_cols=127 Identities=25% Similarity=0.301 Sum_probs=82.9
Q ss_pred CCCcEEEcCCCcCc-ccCCccccCCCCCCEEEccCCcCcccCCcccCCCCCCCEEecCCCcccccCCccCcCCCCCCEEE
Q 004268 43 SKLEKLVLSHNSLT-GRIPSEIGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLDLNLSNNILNGSIPLEFGNLKDLDQLR 121 (764)
Q Consensus 43 ~~L~~L~Ls~n~i~-~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 121 (764)
+++++|++++|.++ +..|..+..+++|++|++++|.+++. ..+..+++|++|+|++|.+++..|..+.++++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 56677777777776 45566666777777777777777644 5666667777777777777655555566666777777
Q ss_pred ccCCcCcccC-CccccCCCCcCEEecccCcccccCC---ccccCCCCCCeeecc
Q 004268 122 LQGNKLDGLI-PSSIGNLTNLTYLDLSLNQLSGRLP---QEVGNLKNLKSLFLD 171 (764)
Q Consensus 122 L~~n~l~~~~-~~~~~~l~~L~~L~L~~n~l~~~~~---~~~~~l~~L~~L~L~ 171 (764)
+++|+++++. +..+..+++|++|++++|++++..+ ..+..+++|+.|+++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 7777766542 3556666667777777666665544 456666666666654
No 392
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.66 E-value=9.8e-16 Score=144.48 Aligned_cols=128 Identities=28% Similarity=0.336 Sum_probs=70.9
Q ss_pred cEEEcCCCcCcccCCccccCCCCCCEEEccCCcCcccCCcccCCCCCCCEEecCCCcccccCCccCcCCCCCCEEEccCC
Q 004268 46 EKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLDLNLSNNILNGSIPLEFGNLKDLDQLRLQGN 125 (764)
Q Consensus 46 ~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 125 (764)
+.+++++|+++. +|..+. ++|++|++++|++++..+..|..+++|++|+|++|.++++.+..|.++++|++|+|++|
T Consensus 10 ~~l~~~~~~l~~-~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 86 (177)
T 2o6r_A 10 TEIRCNSKGLTS-VPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHEN 86 (177)
T ss_dssp TEEECCSSCCSS-CCTTCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCCcc-CCCCCC--CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCC
Confidence 455555555553 222221 35555555555555444445555555555555555555555555555566666666666
Q ss_pred cCcccCCccccCCCCcCEEecccCcccccCCccccCCCCCCeeecccCCCC
Q 004268 126 KLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNLKSLFLDNNHLS 176 (764)
Q Consensus 126 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~ 176 (764)
+++++++..|.++++|++|+|++|+++++.+..|.++++|++|+|++|.+.
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 137 (177)
T 2o6r_A 87 KLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWD 137 (177)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred CccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCee
Confidence 665555555555566666666666665555555555666666666666554
No 393
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.65 E-value=1.2e-15 Score=143.79 Aligned_cols=129 Identities=26% Similarity=0.252 Sum_probs=72.1
Q ss_pred eeEEEeCCCCccccCCccccCCCCCcEEEcCCCcCcccCCccccCCCCCCEEEccCCcCcccCCcccCCCCCCCEEecCC
Q 004268 21 LVTFRIWGTLLSGRMPSEIGALSKLEKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLDLNLSN 100 (764)
Q Consensus 21 l~~L~l~~~~~~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~ 100 (764)
.+.+++++++++ .+|..+. ++|++|++++|+++++.+..|..+++|++|+|++|++++..+..|..+++|++|+|++
T Consensus 9 ~~~l~~~~~~l~-~~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 9 GTEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TTEEECCSSCCS-SCCTTCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCc-cCCCCCC--CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 345555555554 3333222 4555666666665555555555556666666666665544444555556666666666
Q ss_pred CcccccCCccCcCCCCCCEEEccCCcCcccCCccccCCCCcCEEecccCccc
Q 004268 101 NILNGSIPLEFGNLKDLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLSLNQLS 152 (764)
Q Consensus 101 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 152 (764)
|.++++.+..|..+++|++|+|++|+++++++..|..+++|++|+|++|++.
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 137 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWD 137 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCee
Confidence 6665555555555566666666666665555555555556666666666554
No 394
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.63 E-value=5.5e-16 Score=145.99 Aligned_cols=132 Identities=21% Similarity=0.197 Sum_probs=56.6
Q ss_pred ccCCCCCcEEEcCCCcCcccCCccccCC-CCCCEEEccCCcCcccCCcccCCCCCCCEEecCCCcccccCCccCcCCCCC
Q 004268 39 IGALSKLEKLVLSHNSLTGRIPSEIGAL-SRLKVLDLSYNRLTGTIPSEIGSLRDLLDLNLSNNILNGSIPLEFGNLKDL 117 (764)
Q Consensus 39 ~~~l~~L~~L~Ls~n~i~~~~~~~~~~l-~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 117 (764)
+..+.+|++|++++|+++.+ +. +..+ ++|++|+|++|.|++. ..|..+++|++|+|++|.++++.+..|..+++|
T Consensus 15 ~~~~~~L~~L~l~~n~l~~i-~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 90 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIPVI-EN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDL 90 (176)
T ss_dssp EECTTSCEEEECTTSCCCSC-CC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTC
T ss_pred cCCcCCceEEEeeCCCCchh-HH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCC
Confidence 33444444444444444422 22 2222 2444444444444432 344444444444444444444433333444444
Q ss_pred CEEEccCCcCcccCC-ccccCCCCcCEEecccCcccccCCc---cccCCCCCCeeecccCC
Q 004268 118 DQLRLQGNKLDGLIP-SSIGNLTNLTYLDLSLNQLSGRLPQ---EVGNLKNLKSLFLDNNH 174 (764)
Q Consensus 118 ~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~---~~~~l~~L~~L~L~~n~ 174 (764)
++|+|++|+++.+++ ..+..+++|++|++++|+++.+... .+..+++|+.|+++.|.
T Consensus 91 ~~L~L~~N~i~~~~~~~~l~~l~~L~~L~l~~N~i~~~~~~~~~~~~~l~~L~~Ld~~~n~ 151 (176)
T 1a9n_A 91 TELILTNNSLVELGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVK 151 (176)
T ss_dssp CEEECCSCCCCCGGGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEETTEECC
T ss_pred CEEECCCCcCCcchhhHhhhcCCCCCEEEecCCCCCCcHhHHHHHHHHCCccceeCCCcCC
Confidence 444444444443221 1344444444444444444422111 24444444444444443
No 395
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.62 E-value=6.7e-16 Score=145.39 Aligned_cols=137 Identities=22% Similarity=0.206 Sum_probs=118.0
Q ss_pred cccccCCCeeEEEeCCCCccccCCccccCC-CCCcEEEcCCCcCcccCCccccCCCCCCEEEccCCcCcccCCcccCCCC
Q 004268 13 LNFTCFPNLVTFRIWGTLLSGRMPSEIGAL-SKLEKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTGTIPSEIGSLR 91 (764)
Q Consensus 13 ~~~~~~~~l~~L~l~~~~~~~~~~~~~~~l-~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~ 91 (764)
..|..+++|+.|++++|.++. ++. +..+ ++|++|+|++|.+++. ..|..+++|++|+|++|+|++..+..|..++
T Consensus 13 ~~~~~~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 88 (176)
T 1a9n_A 13 AQYTNAVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALP 88 (176)
T ss_dssp CEEECTTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCT
T ss_pred HhcCCcCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCC
Confidence 457788999999999999984 454 5554 4999999999999976 6899999999999999999976666679999
Q ss_pred CCCEEecCCCcccccCC-ccCcCCCCCCEEEccCCcCcccCCc---cccCCCCcCEEecccCcccc
Q 004268 92 DLLDLNLSNNILNGSIP-LEFGNLKDLDQLRLQGNKLDGLIPS---SIGNLTNLTYLDLSLNQLSG 153 (764)
Q Consensus 92 ~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~---~~~~l~~L~~L~L~~n~l~~ 153 (764)
+|++|+|++|.++.+.+ ..+..+++|++|++++|.+..+++. .+..+++|+.||+++|.+..
T Consensus 89 ~L~~L~L~~N~i~~~~~~~~l~~l~~L~~L~l~~N~i~~~~~~~~~~~~~l~~L~~Ld~~~n~~~~ 154 (176)
T 1a9n_A 89 DLTELILTNNSLVELGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKE 154 (176)
T ss_dssp TCCEEECCSCCCCCGGGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEETTEECCHHH
T ss_pred CCCEEECCCCcCCcchhhHhhhcCCCCCEEEecCCCCCCcHhHHHHHHHHCCccceeCCCcCCHHH
Confidence 99999999999985443 3789999999999999999966443 58999999999999999864
No 396
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.54 E-value=1.7e-17 Score=159.67 Aligned_cols=135 Identities=23% Similarity=0.273 Sum_probs=81.4
Q ss_pred cccCCCeeEEEeCCCCccccCCc------cccCCCCCcEEEcCCCcCcccCCccccCCCCCCEEEccCCcCcccCCcccC
Q 004268 15 FTCFPNLVTFRIWGTLLSGRMPS------EIGALSKLEKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTGTIPSEIG 88 (764)
Q Consensus 15 ~~~~~~l~~L~l~~~~~~~~~~~------~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~ 88 (764)
|...+.++.+++.++.+++..|. .+..+++|++|+|++|.+++ +| .+..+++|++|+|++|+++ .+|..+.
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~ 90 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDA 90 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhh
Confidence 44555566666666666555554 66666666666666666664 34 5666666666666666666 3455555
Q ss_pred CCCCCCEEecCCCcccccCCccCcCCCCCCEEEccCCcCcccCC-ccccCCCCcCEEecccCccccc
Q 004268 89 SLRDLLDLNLSNNILNGSIPLEFGNLKDLDQLRLQGNKLDGLIP-SSIGNLTNLTYLDLSLNQLSGR 154 (764)
Q Consensus 89 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~ 154 (764)
.+++|++|+|++|.++++. .+..+++|++|++++|+++.+.+ ..+..+++|++|++++|++.+.
T Consensus 91 ~~~~L~~L~L~~N~l~~l~--~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~ 155 (198)
T 1ds9_A 91 VADTLEELWISYNQIASLS--GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYND 155 (198)
T ss_dssp HHHHCSEEEEEEEECCCHH--HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHH
T ss_pred cCCcCCEEECcCCcCCcCC--ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccc
Confidence 5566666666666666432 45556666666666666664432 3455666666666666666544
No 397
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.54 E-value=5.2e-17 Score=156.32 Aligned_cols=132 Identities=21% Similarity=0.295 Sum_probs=78.1
Q ss_pred CCcCCCCCCeEEccCCcccCCCCccccCCCCCCeEeccCccccCCCCCCCCCCCccceEEccCCcCccCCChhhhccccc
Q 004268 254 TIGNLTNLIALDLSSNQLSGLLPREVGNLKYLASLSLNGNILIGPIPPTIGYLTNLTYLNLGYNRLSSSIPPELMNCSQL 333 (764)
Q Consensus 254 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L 333 (764)
.+..+++|+.|+|++|.+++ .| .+..+++|+.|++++|.+. .+|..+..+++|++|++++|++++ +| .+..+++|
T Consensus 43 ~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L 117 (198)
T 1ds9_A 43 TLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-LS-GIEKLVNL 117 (198)
T ss_dssp HHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHS
T ss_pred HHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCCEEECcCCcCCc-CC-ccccCCCC
Confidence 45555666666666666654 23 5556666666666666665 334444555666666666666664 22 46666667
Q ss_pred ceeeccccccccCCc-hhcccccccceeecccccccCCCCCC----------CCCCCccceecCCCCccc
Q 004268 334 LNLVLSHNSLSGSIP-SEIGNLIFFRQLDLSRNFINGTIPSQ----------LGKIPNISAVDLSKNNLS 392 (764)
Q Consensus 334 ~~L~ls~N~l~~~~~-~~~~~l~~L~~L~l~~N~l~~~~~~~----------~~~l~~L~~l~l~~N~l~ 392 (764)
+.|++++|++++..+ ..+..+++|+.|++++|++.+..|.. +..+++|+.|| +|+++
T Consensus 118 ~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 118 RVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD--GMPVD 185 (198)
T ss_dssp SEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC--CGGGT
T ss_pred CEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHHhCCCcEEEC--CcccC
Confidence 777777776664322 35666666666777666665554432 55666666665 55554
No 398
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.53 E-value=5e-14 Score=131.43 Aligned_cols=104 Identities=31% Similarity=0.339 Sum_probs=58.1
Q ss_pred cEEEcCCCcCcccCCccccCCCCCCEEEccCCcCcccCCcccCCCCCCCEEecCCCcccccCCccCcCCCCCCEEEccCC
Q 004268 46 EKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLDLNLSNNILNGSIPLEFGNLKDLDQLRLQGN 125 (764)
Q Consensus 46 ~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 125 (764)
+.|++++|.++. +|..+. ++|++|+|++|+|++..+..|..+++|++|+|++|+|+++.+..|.++++|++|+|++|
T Consensus 12 ~~l~~s~n~l~~-ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 12 TTVDCSGKSLAS-VPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp TEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcCc-cCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 455566665553 333332 45555666666555555555555555555555555555555555555555555555555
Q ss_pred cCcccCCccccCCCCcCEEecccCccc
Q 004268 126 KLDGLIPSSIGNLTNLTYLDLSLNQLS 152 (764)
Q Consensus 126 ~l~~~~~~~~~~l~~L~~L~L~~n~l~ 152 (764)
+++++++..|.++++|++|+|++|++.
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~ 115 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWD 115 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCC
Confidence 555555555555555555555555554
No 399
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.51 E-value=1.6e-12 Score=138.66 Aligned_cols=314 Identities=11% Similarity=0.082 Sum_probs=154.4
Q ss_pred ccCCCCCcEEEcCCCcCcccCCccccCCCCCCEEEccCCcCcccCCcccCCCCCCCEEecCCCcccccCCccCcCCCCCC
Q 004268 39 IGALSKLEKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLDLNLSNNILNGSIPLEFGNLKDLD 118 (764)
Q Consensus 39 ~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 118 (764)
+....+|+.+.+.. .++.+...+|.++.+|+.++|..+ ++.+...+|.++ +|+.+.+..+ +..+...+|... +|+
T Consensus 42 ~~~~~~i~~v~ip~-~vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~~-~L~ 116 (379)
T 4h09_A 42 YKDRDRISEVRVNS-GITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQGT-DLD 116 (379)
T ss_dssp GGGGGGCSEEEECT-TEEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTTC-CCS
T ss_pred cccccCCEEEEeCC-CccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEeccceeccC-Ccc
Confidence 44445555555543 344455555666666666666543 444445555554 4555555433 333555555543 455
Q ss_pred EEEccCCcCcccCCccccCCCCcCEEecccCcccccCCccccCCCCCCeeecccCCCCCCCCCccccCCCccEEEecCcc
Q 004268 119 QLRLQGNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRLPQEVGNLKNLKSLFLDNNHLSGPIPSTLYHLNQLATLCLGYNK 198 (764)
Q Consensus 119 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~ 198 (764)
.+.+..+ +..+...+|.++ +|+.+.+..+ ++.+...+|.++.+++.+.+..+........... .+.
T Consensus 117 ~i~lp~~-~~~i~~~~F~~~-~l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~-----------~~~ 182 (379)
T 4h09_A 117 DFEFPGA-TTEIGNYIFYNS-SVKRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVL-----------YNK 182 (379)
T ss_dssp EEECCTT-CCEECTTTTTTC-CCCEEEECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEE-----------EET
T ss_pred cccCCCc-cccccccccccc-eeeeeeccce-eeccccchhcccccccccccccccceeeccccee-----------ccc
Confidence 5555443 222444444443 3444443332 3334445555555555555444332210000000 000
Q ss_pred CcCCcccccCCccccceeeccCcccccccCccccCCCCCCEEEccCCcccCCCCcCCcCCCCCCeEEccCCcccCCCCcc
Q 004268 199 LVGPVTKEVGNMKNLDRLHLNGNNLTGSIPSTIGYLNLLDELHLSHNRLDGPIPPTIGNLTNLIALDLSSNQLSGLLPRE 278 (764)
Q Consensus 199 i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 278 (764)
. ......+.....+..+.+..+.. ......+.....|+.+.+..+ +..+...+|.++.+|+.+.+..+ +..+...+
T Consensus 183 ~-~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~a 258 (379)
T 4h09_A 183 N-KTILESYPAAKTGTEFTIPSTVK-TVTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFL 258 (379)
T ss_dssp T-SSEEEECCTTCCCSEEECCTTCC-EECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTT
T ss_pred c-cceecccccccccccccccccee-EEeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccc
Confidence 0 01112233334444444443322 234445555566666666544 23244556666666666666554 44455556
Q ss_pred ccCCCCCCeEeccCccccCCCCCCCCCCCccceEEccCCcCccCCChhhhcccccceeeccccccccCCchhcccccccc
Q 004268 279 VGNLKYLASLSLNGNILIGPIPPTIGYLTNLTYLNLGYNRLSSSIPPELMNCSQLLNLVLSHNSLSGSIPSEIGNLIFFR 358 (764)
Q Consensus 279 ~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~ 358 (764)
|.++.+|+.+.+..+ +..+...+|..+++|+.+.+.++.++.+...+|.++.+|+.+.|..+ ++.+...+|.++.+|+
T Consensus 259 F~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~ 336 (379)
T 4h09_A 259 LQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALS 336 (379)
T ss_dssp TTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCC
T ss_pred cceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCC
Confidence 666666666666443 33344455666666666666666665555556666666666666543 4444455566666666
Q ss_pred eeecccccccCCCCCCCCCC
Q 004268 359 QLDLSRNFINGTIPSQLGKI 378 (764)
Q Consensus 359 ~L~l~~N~l~~~~~~~~~~l 378 (764)
.+.+..+ ++.+-..+|.+.
T Consensus 337 ~i~ip~~-v~~I~~~aF~~c 355 (379)
T 4h09_A 337 TISYPKS-ITLIESGAFEGS 355 (379)
T ss_dssp CCCCCTT-CCEECTTTTTTS
T ss_pred EEEECCc-cCEEchhHhhCC
Confidence 6666443 443444555444
No 400
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.51 E-value=8.7e-14 Score=130.20 Aligned_cols=104 Identities=26% Similarity=0.291 Sum_probs=56.9
Q ss_pred cEEEcCCCcCcccCCccccCCCCCCEEEccCCcCcccCCcccCCCCCCCEEecCCCcccccCCccCcCCCCCCEEEccCC
Q 004268 46 EKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTGTIPSEIGSLRDLLDLNLSNNILNGSIPLEFGNLKDLDQLRLQGN 125 (764)
Q Consensus 46 ~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 125 (764)
+.+++++|+++ .+|..+. ++|++|+|++|+|++..|..|..+++|++|+|++|+|+++.+..|.++++|++|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 45555555555 3333332 45555555555555555555555555555555555555554445555555555555555
Q ss_pred cCcccCCccccCCCCcCEEecccCccc
Q 004268 126 KLDGLIPSSIGNLTNLTYLDLSLNQLS 152 (764)
Q Consensus 126 ~l~~~~~~~~~~l~~L~~L~L~~n~l~ 152 (764)
+|+++++..|.++++|++|+|++|++.
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcc
Confidence 555555444555555555555555554
No 401
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.51 E-value=7.6e-14 Score=130.18 Aligned_cols=105 Identities=31% Similarity=0.339 Sum_probs=77.5
Q ss_pred CCEEEccCCcCcccCCcccCCCCCCCEEecCCCcccccCCccCcCCCCCCEEEccCCcCcccCCccccCCCCcCEEeccc
Q 004268 69 LKVLDLSYNRLTGTIPSEIGSLRDLLDLNLSNNILNGSIPLEFGNLKDLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLSL 148 (764)
Q Consensus 69 L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 148 (764)
.++|++++|.++. +|..+. ++|++|+|++|.|+++.+..|.++++|++|+|++|+|+++++..|.++++|++|+|++
T Consensus 11 ~~~l~~s~n~l~~-ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLAS-VPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcCc-cCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 4677888887773 555443 6777778877777777777777777777777777777777777777777777777777
Q ss_pred CcccccCCccccCCCCCCeeecccCCCC
Q 004268 149 NQLSGRLPQEVGNLKNLKSLFLDNNHLS 176 (764)
Q Consensus 149 n~l~~~~~~~~~~l~~L~~L~L~~n~i~ 176 (764)
|+|+++.+..|.++++|+.|+|++|.++
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 115 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWD 115 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCC
Confidence 7777666666777777777777777765
No 402
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.50 E-value=2.3e-12 Score=137.57 Aligned_cols=302 Identities=11% Similarity=0.052 Sum_probs=177.0
Q ss_pred cccCCCeeEEEeCCCCccccCCccccCCCCCcEEEcCCCcCcccCCccccCCCCCCEEEccCCcCcccCCcccCCCCCCC
Q 004268 15 FTCFPNLVTFRIWGTLLSGRMPSEIGALSKLEKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTGTIPSEIGSLRDLL 94 (764)
Q Consensus 15 ~~~~~~l~~L~l~~~~~~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~ 94 (764)
|....+|+.+.+.. +++.+-..+|.+|.+|+.++|..+ ++.+...+|.++ +|+.+.+..+ ++.+...+|... +|+
T Consensus 42 ~~~~~~i~~v~ip~-~vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~~-~L~ 116 (379)
T 4h09_A 42 YKDRDRISEVRVNS-GITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQGT-DLD 116 (379)
T ss_dssp GGGGGGCSEEEECT-TEEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTTC-CCS
T ss_pred cccccCCEEEEeCC-CccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEeccceeccC-Ccc
Confidence 55667899999975 488788889999999999999764 777888999987 6888888765 555667788775 899
Q ss_pred EEecCCCcccccCCccCcCCCCCCEEEccCCcCcccCCccccCCCCcCEEecccCcccccC------------CccccCC
Q 004268 95 DLNLSNNILNGSIPLEFGNLKDLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLSLNQLSGRL------------PQEVGNL 162 (764)
Q Consensus 95 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~------------~~~~~~l 162 (764)
.+.+.++- ..+...+|.+. +|+.+.+..+ ++.+...+|.++.+++.+.+..+...... ...+...
T Consensus 117 ~i~lp~~~-~~i~~~~F~~~-~l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (379)
T 4h09_A 117 DFEFPGAT-TEIGNYIFYNS-SVKRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAA 193 (379)
T ss_dssp EEECCTTC-CEECTTTTTTC-CCCEEEECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTT
T ss_pred cccCCCcc-ccccccccccc-eeeeeeccce-eeccccchhcccccccccccccccceeecccceecccccceecccccc
Confidence 99998764 44777888775 6888777654 55677888999999999988766543221 1123333
Q ss_pred CCCCeeecccCCCCCCCCCccccCCCccEEEecCccCcCCcccccCCccccceeeccCcccccccCccccCCCCCCEEEc
Q 004268 163 KNLKSLFLDNNHLSGPIPSTLYHLNQLATLCLGYNKLVGPVTKEVGNMKNLDRLHLNGNNLTGSIPSTIGYLNLLDELHL 242 (764)
Q Consensus 163 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 242 (764)
..+..+.+..+... +....+....+|+.+.+..+ +..+...+|..+..|+.+.+..+ ++.+...
T Consensus 194 ~~~~~~~~~~~~~~-i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~------------- 257 (379)
T 4h09_A 194 KTGTEFTIPSTVKT-VTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSF------------- 257 (379)
T ss_dssp CCCSEEECCTTCCE-ECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTT-------------
T ss_pred ccccccccccceeE-Eeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCcc-------------
Confidence 44444444332221 33344444455555544332 23334444444455555554433 3333444
Q ss_pred cCCcccCCCCcCCcCCCCCCeEEccCCcccCCCCccccCCCCCCeEeccCccccCCCCCCCCCCCccceEEccCCcCccC
Q 004268 243 SHNRLDGPIPPTIGNLTNLIALDLSSNQLSGLLPREVGNLKYLASLSLNGNILIGPIPPTIGYLTNLTYLNLGYNRLSSS 322 (764)
Q Consensus 243 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~ 322 (764)
+|.++.+|+.+.+..+ +..+...+|.++.+|+.+.+.++.++.+...+|..+.+|+.+.|..+ ++.+
T Consensus 258 -----------aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I 324 (379)
T 4h09_A 258 -----------LLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTI 324 (379)
T ss_dssp -----------TTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEE
T ss_pred -----------ccceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEE
Confidence 4444444444444332 33233344444445555555444444444444555555555555433 3334
Q ss_pred CChhhhcccccceeeccccccccCCchhcccc
Q 004268 323 IPPELMNCSQLLNLVLSHNSLSGSIPSEIGNL 354 (764)
Q Consensus 323 ~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l 354 (764)
...+|.++.+|+++.+..+ ++.+...+|.+.
T Consensus 325 ~~~aF~~C~~L~~i~ip~~-v~~I~~~aF~~c 355 (379)
T 4h09_A 325 QVYAFKNCKALSTISYPKS-ITLIESGAFEGS 355 (379)
T ss_dssp CTTTTTTCTTCCCCCCCTT-CCEECTTTTTTS
T ss_pred HHHHhhCCCCCCEEEECCc-cCEEchhHhhCC
Confidence 4445555555555555433 433334444443
No 403
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.49 E-value=1.2e-13 Score=129.15 Aligned_cols=104 Identities=33% Similarity=0.416 Sum_probs=80.0
Q ss_pred CEEEccCCcCcccCCcccCCCCCCCEEecCCCcccccCCccCcCCCCCCEEEccCCcCcccCCccccCCCCcCEEecccC
Q 004268 70 KVLDLSYNRLTGTIPSEIGSLRDLLDLNLSNNILNGSIPLEFGNLKDLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLSLN 149 (764)
Q Consensus 70 ~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 149 (764)
+.+++++|+++ .+|..+. ++|++|+|++|.|+++.+..|.++++|++|+|++|+|+++++..|.++++|++|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 67888888887 4555554 67888888888888777777888888888888888888777777777888888888888
Q ss_pred cccccCCccccCCCCCCeeecccCCCC
Q 004268 150 QLSGRLPQEVGNLKNLKSLFLDNNHLS 176 (764)
Q Consensus 150 ~l~~~~~~~~~~l~~L~~L~L~~n~i~ 176 (764)
+|+.+.+..|.++++|+.|+|++|.+.
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcc
Confidence 887766666777777777777777765
No 404
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.36 E-value=7.6e-15 Score=155.07 Aligned_cols=138 Identities=22% Similarity=0.153 Sum_probs=60.1
Q ss_pred CCCCEEecCCCcccccCCccC-cCCCCCCEEEccCCcCcccCCccc-----cCCCCcCEEecccCcccccC----Ccccc
Q 004268 91 RDLLDLNLSNNILNGSIPLEF-GNLKDLDQLRLQGNKLDGLIPSSI-----GNLTNLTYLDLSLNQLSGRL----PQEVG 160 (764)
Q Consensus 91 ~~L~~L~L~~n~l~~~~~~~~-~~l~~L~~L~L~~n~l~~~~~~~~-----~~l~~L~~L~L~~n~l~~~~----~~~~~ 160 (764)
++|++|+|++|.++......+ ..+++|++|+|++|.++......+ ...++|++|+|++|.++... +.++.
T Consensus 101 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~ 180 (372)
T 3un9_A 101 HALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLA 180 (372)
T ss_dssp SCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHH
T ss_pred CCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHh
Confidence 345555555554442221111 123345555555555543222222 12344555555555554321 12223
Q ss_pred CCCCCCeeecccCCCCCCC----CCccccCCCccEEEecCccCcCCccc----ccCCccccceeeccCcccccccC
Q 004268 161 NLKNLKSLFLDNNHLSGPI----PSTLYHLNQLATLCLGYNKLVGPVTK----EVGNMKNLDRLHLNGNNLTGSIP 228 (764)
Q Consensus 161 ~l~~L~~L~L~~n~i~~~~----~~~~~~l~~L~~L~l~~n~i~~~~~~----~~~~l~~L~~L~L~~n~l~~~~~ 228 (764)
.+++|++|+|++|.|++.. ...+..+++|++|+|++|.|+..... .+...++|++|+|++|.+++...
T Consensus 181 ~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~g~ 256 (372)
T 3un9_A 181 GNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSEGR 256 (372)
T ss_dssp TCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHHHH
T ss_pred cCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHHHH
Confidence 4455555555555544211 22334445555555555555432221 22234556666666666554333
No 405
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.34 E-value=1.1e-14 Score=153.91 Aligned_cols=182 Identities=18% Similarity=0.149 Sum_probs=99.1
Q ss_pred CCCcEEEcCCCcCcccCCccccC-----CCCCCEEEccCCcCcccCCccc-CCCCCCCEEecCCCcccccCCccC-----
Q 004268 43 SKLEKLVLSHNSLTGRIPSEIGA-----LSRLKVLDLSYNRLTGTIPSEI-GSLRDLLDLNLSNNILNGSIPLEF----- 111 (764)
Q Consensus 43 ~~L~~L~Ls~n~i~~~~~~~~~~-----l~~L~~L~L~~n~i~~~~~~~~-~~l~~L~~L~L~~n~l~~~~~~~~----- 111 (764)
+.|++|+|++|.++......+.. .++|++|+|++|.|+......+ ..+++|++|+|++|.++......+
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 45667777777666433222222 2567777777776653222222 234566777777777664333333
Q ss_pred cCCCCCCEEEccCCcCcccC----CccccCCCCcCEEecccCcccccC----CccccCCCCCCeeecccCCCCCCC----
Q 004268 112 GNLKDLDQLRLQGNKLDGLI----PSSIGNLTNLTYLDLSLNQLSGRL----PQEVGNLKNLKSLFLDNNHLSGPI---- 179 (764)
Q Consensus 112 ~~l~~L~~L~L~~n~l~~~~----~~~~~~l~~L~~L~L~~n~l~~~~----~~~~~~l~~L~~L~L~~n~i~~~~---- 179 (764)
...++|++|+|++|.++... +.++..+++|++|+|++|.|++.. ..++...++|++|+|++|.|++..
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l 231 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALAL 231 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHH
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHH
Confidence 23466777777777765422 223355667777777777776432 344556667777777777776322
Q ss_pred CCccccCCCccEEEecCccCcCCcccccCCc---c--ccceee--ccCcccc
Q 004268 180 PSTLYHLNQLATLCLGYNKLVGPVTKEVGNM---K--NLDRLH--LNGNNLT 224 (764)
Q Consensus 180 ~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l---~--~L~~L~--L~~n~l~ 224 (764)
...+..+++|++|+|++|.|.......+..+ . .|+.+. +..+.+.
T Consensus 232 ~~~L~~~~~L~~L~Ls~N~i~~~g~~~L~~~~~~~~~~L~~l~~ll~~~~~~ 283 (372)
T 3un9_A 232 ARAAREHPSLELLHLYFNELSSEGRQVLRDLGGAAEGGARVVVSLTEGTAVS 283 (372)
T ss_dssp HHHHHHCSSCCEEECTTSSCCHHHHHHHHHCC------CEEECCCC----CH
T ss_pred HHHHHhCCCCCEEeccCCCCCHHHHHHHHHHhcCCCccchhhHhhhcCCccC
Confidence 1233455677777777777765444333322 1 155555 5555554
No 406
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.32 E-value=5.5e-12 Score=127.14 Aligned_cols=148 Identities=14% Similarity=0.085 Sum_probs=115.6
Q ss_pred HHHHhhcCCcceeeeecCceeEEEEEECCCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcC-CCceeeEeeEEeeCCE
Q 004268 503 MIEATEDFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIR-HRNIVKLYGFCLHNKC 581 (764)
Q Consensus 503 ~~~~~~~y~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~ 581 (764)
+......|++....+.|+.+.||++... ++.+++|......... ...+.+|+++++.+. +..++++++++.+.+.
T Consensus 9 l~~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~---~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~ 84 (263)
T 3tm0_A 9 LKKLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGT---TYDVEREKDMMLWLEGKLPVPKVLHFERHDGW 84 (263)
T ss_dssp HHHHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTS---TTCHHHHHHHHHHHTTTSCCCCEEEEEEETTE
T ss_pred HHHHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCC---HHHHHHHHHHHHHHhcCCCCCeEEEEEecCCc
Confidence 3455678998888998999999999765 7899999986532111 145789999999994 6788999999999999
Q ss_pred EEEEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcC-------------------------------
Q 004268 582 MFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDC------------------------------- 630 (764)
Q Consensus 582 ~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~------------------------------- 630 (764)
.|+||||++|.++.+... +......++.++++++..||...
T Consensus 85 ~~lv~e~i~G~~l~~~~~--------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (263)
T 3tm0_A 85 SNLLMSEADGVLCSEEYE--------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCE 156 (263)
T ss_dssp EEEEEECCSSEEHHHHCC--------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGG
T ss_pred eEEEEEecCCeehhhccC--------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccc
Confidence 999999999999877632 11223467889999999999510
Q ss_pred -------------------------CCCcEEcCCCCCCeeecCCCCEEEeeeccccc
Q 004268 631 -------------------------KPSIVHRDISSNNILLNSNLEAFVADFGLARL 662 (764)
Q Consensus 631 -------------------------~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~ 662 (764)
..+++|+|++|.||++++++.+.|+||+.+..
T Consensus 157 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~ 213 (263)
T 3tm0_A 157 NWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR 213 (263)
T ss_dssp GGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred cccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhccc
Confidence 15699999999999998765567999998753
No 407
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.29 E-value=7.2e-12 Score=131.93 Aligned_cols=102 Identities=24% Similarity=0.239 Sum_probs=52.6
Q ss_pred EEcCCC-cCcccCCccccCCCCCCEEEccC-CcCcccCCcccCCCCCCCEEecCCCcccccCCccCcCCCCCCEEEccCC
Q 004268 48 LVLSHN-SLTGRIPSEIGALSRLKVLDLSY-NRLTGTIPSEIGSLRDLLDLNLSNNILNGSIPLEFGNLKDLDQLRLQGN 125 (764)
Q Consensus 48 L~Ls~n-~i~~~~~~~~~~l~~L~~L~L~~-n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 125 (764)
++++++ +++. +|. +..+++|++|+|++ |.|+++.+..|..+++|++|+|++|.|+++.+..|.++++|++|+|++|
T Consensus 13 v~~~~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N 90 (347)
T 2ifg_A 13 LRCTRDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFN 90 (347)
T ss_dssp EECCSSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSS
T ss_pred EEcCCCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCC
Confidence 455554 4542 333 55555555555553 5555444445555555555555555555555555555555555555555
Q ss_pred cCcccCCccccCCCCcCEEecccCccc
Q 004268 126 KLDGLIPSSIGNLTNLTYLDLSLNQLS 152 (764)
Q Consensus 126 ~l~~~~~~~~~~l~~L~~L~L~~n~l~ 152 (764)
+|+++++..|..++ |+.|+|++|.+.
T Consensus 91 ~l~~~~~~~~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 91 ALESLSWKTVQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp CCSCCCSTTTCSCC-CCEEECCSSCCC
T ss_pred ccceeCHHHcccCC-ceEEEeeCCCcc
Confidence 55554444444443 555555555544
No 408
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.29 E-value=7.4e-12 Score=131.82 Aligned_cols=103 Identities=23% Similarity=0.281 Sum_probs=78.3
Q ss_pred EEEccCC-cCcccCCcccCCCCCCCEEecCC-CcccccCCccCcCCCCCCEEEccCCcCcccCCccccCCCCcCEEeccc
Q 004268 71 VLDLSYN-RLTGTIPSEIGSLRDLLDLNLSN-NILNGSIPLEFGNLKDLDQLRLQGNKLDGLIPSSIGNLTNLTYLDLSL 148 (764)
Q Consensus 71 ~L~L~~n-~i~~~~~~~~~~l~~L~~L~L~~-n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 148 (764)
.++++++ +++ .+|. +..+++|++|+|++ |.|+++.+..|.++++|+.|+|++|+|+++++..|.++++|++|+|++
T Consensus 12 ~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 4677777 777 4666 77778888888875 888877777788888888888888888877777788888888888888
Q ss_pred CcccccCCccccCCCCCCeeecccCCCC
Q 004268 149 NQLSGRLPQEVGNLKNLKSLFLDNNHLS 176 (764)
Q Consensus 149 n~l~~~~~~~~~~l~~L~~L~L~~n~i~ 176 (764)
|+|+++.+..|..++ |+.|+|++|.+.
T Consensus 90 N~l~~~~~~~~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 90 NALESLSWKTVQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp SCCSCCCSTTTCSCC-CCEEECCSSCCC
T ss_pred CccceeCHHHcccCC-ceEEEeeCCCcc
Confidence 888776666666655 777777777665
No 409
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.11 E-value=1.1e-10 Score=117.51 Aligned_cols=139 Identities=17% Similarity=0.113 Sum_probs=101.6
Q ss_pred hhcCCcceeeeecCceeEEEEEECCCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCc--eeeEeeEEeeCCEEEE
Q 004268 507 TEDFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRN--IVKLYGFCLHNKCMFL 584 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpn--iv~~~~~~~~~~~~~l 584 (764)
...|.+....+.|..+.||++...+|+.+++|....... ..+.+|+++++.+.+.+ +++++++...++..++
T Consensus 19 ~~~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~~~------~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~ 92 (264)
T 1nd4_A 19 LFGYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSGAL------NELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWL 92 (264)
T ss_dssp TTTCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSCTT------SCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEE
T ss_pred cCCCceEecccCCCCceEEEEecCCCCeEEEEeCCcccc------hhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEE
Confidence 345555443345666999999877788899999765421 45678999999985433 6778998888888999
Q ss_pred EEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcC----------------------------------
Q 004268 585 IYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDC---------------------------------- 630 (764)
Q Consensus 585 v~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---------------------------------- 630 (764)
||||++|.++. ... .. ...++.++++++..||...
T Consensus 93 v~e~i~G~~l~--~~~------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (264)
T 1nd4_A 93 LLGEVPGQDLL--SSH------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEE 161 (264)
T ss_dssp EEECCSSEETT--TSC------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGG
T ss_pred EEEecCCcccC--cCc------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhh
Confidence 99999998874 211 11 1256778888888888321
Q ss_pred ---------------------CCCcEEcCCCCCCeeecCCCCEEEeeeccccc
Q 004268 631 ---------------------KPSIVHRDISSNNILLNSNLEAFVADFGLARL 662 (764)
Q Consensus 631 ---------------------~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~ 662 (764)
..+++|+|++|.||++++++.+.|+|||.+..
T Consensus 162 ~~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 162 HQGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp GTTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred ccCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 12399999999999998776667999998754
No 410
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=99.01 E-value=6.3e-10 Score=117.50 Aligned_cols=144 Identities=18% Similarity=0.267 Sum_probs=107.1
Q ss_pred cceeeeecCceeEEEEEECCCCEEEEEEcc--CCCCCcHHHHHHHHHHHHHHHhcC--CCceeeEeeEEeeC---CEEEE
Q 004268 512 IKYCIGTGGYGSVYRAQLSSGKLVALKKLH--RSETEEPAFLESFQTEARLLSQIR--HRNIVKLYGFCLHN---KCMFL 584 (764)
Q Consensus 512 ~~~~ig~G~~g~V~~~~~~~~~~vavK~~~--~~~~~~~~~~~~~~~E~~~l~~l~--hpniv~~~~~~~~~---~~~~l 584 (764)
..+.++.|.++.||++... +..+++|+.. ...... ....+.+|+++++.+. +..+++++.++.+. +..|+
T Consensus 42 ~~~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~~~--~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~ 118 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKLLP--SAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFY 118 (359)
T ss_dssp EEEECCC-CCSCEEEEECS-SCEEEEECCCC------------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEE
T ss_pred eEEEcCCcccceEEEEEEC-CceEEEEeCCCCCCCCCC--cHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEE
Confidence 4567899999999999876 5688888876 332111 1256789999999996 45688999988776 45899
Q ss_pred EEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcC----------------------------------
Q 004268 585 IYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDC---------------------------------- 630 (764)
Q Consensus 585 v~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---------------------------------- 630 (764)
||||++|..+.+. ....++..+...++.+++++|..||...
T Consensus 119 vme~v~G~~l~~~-----~~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (359)
T 3dxp_A 119 IMEFVSGRVLWDQ-----SLPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETES 193 (359)
T ss_dssp EEECCCCBCCCCT-----TCTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSC
T ss_pred EEEecCCeecCCC-----ccccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcC
Confidence 9999999776432 1223667788889999999999999520
Q ss_pred ---------------------CCCcEEcCCCCCCeeecCCCC--EEEeeecccccc
Q 004268 631 ---------------------KPSIVHRDISSNNILLNSNLE--AFVADFGLARLL 663 (764)
Q Consensus 631 ---------------------~~~iiH~Dlkp~NIll~~~~~--~kl~Dfg~~~~~ 663 (764)
..+++|||++|.||+++.++. +.++||+.+...
T Consensus 194 ~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~g 249 (359)
T 3dxp_A 194 IPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTLG 249 (359)
T ss_dssp CHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEEE
T ss_pred ChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECccccccC
Confidence 257999999999999997653 689999988653
No 411
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.98 E-value=1.2e-10 Score=121.62 Aligned_cols=83 Identities=16% Similarity=0.196 Sum_probs=40.5
Q ss_pred CCCccEEEecCccCcCCccccc---CCccccceeeccCccccccc----CccccCCCCCCEEEccCCcccCCCCcCCcC-
Q 004268 186 LNQLATLCLGYNKLVGPVTKEV---GNMKNLDRLHLNGNNLTGSI----PSTIGYLNLLDELHLSHNRLDGPIPPTIGN- 257 (764)
Q Consensus 186 l~~L~~L~l~~n~i~~~~~~~~---~~l~~L~~L~L~~n~l~~~~----~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~- 257 (764)
+++|+.|+|++|.+.......+ ..+++|++|+|+.|.+++.. +..+..+++|+.|+|++|.|++.....+..
T Consensus 251 ~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~a 330 (362)
T 2ra8_A 251 FPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQKS 330 (362)
T ss_dssp CTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHHH
T ss_pred CCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHHHHH
Confidence 3455555555554432111111 13566666666666665432 222234566777777766665432222322
Q ss_pred CCCCCeEEccCCc
Q 004268 258 LTNLIALDLSSNQ 270 (764)
Q Consensus 258 l~~L~~L~L~~n~ 270 (764)
+ ...++++.++
T Consensus 331 l--g~~~~~~~~~ 341 (362)
T 2ra8_A 331 L--PMKIDVSDSQ 341 (362)
T ss_dssp C--CSEEECCSBC
T ss_pred c--CCEEEecCCc
Confidence 1 2446666665
No 412
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.98 E-value=1e-10 Score=122.17 Aligned_cols=81 Identities=17% Similarity=0.149 Sum_probs=35.4
Q ss_pred ccCCCeeEEEeCCCCcc---------ccCCccccCCCCCcEEEcCCCcCcccCCccccCCCCCCEEEccCCcCcccCCcc
Q 004268 16 TCFPNLVTFRIWGTLLS---------GRMPSEIGALSKLEKLVLSHNSLTGRIPSEIGALSRLKVLDLSYNRLTGTIPSE 86 (764)
Q Consensus 16 ~~~~~l~~L~l~~~~~~---------~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~ 86 (764)
+.||+|+.|.+.+.... +.++..+..+++|+.|+|++|.-. ..+. +. +++|+.|+|..|.+.......
T Consensus 136 ~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l-~l~~-~~-~~~L~~L~L~~~~l~~~~l~~ 212 (362)
T 2ra8_A 136 EKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL-SIGK-KP-RPNLKSLEIISGGLPDSVVED 212 (362)
T ss_dssp HHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-BCCS-CB-CTTCSEEEEECSBCCHHHHHH
T ss_pred hhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-eecc-cc-CCCCcEEEEecCCCChHHHHH
Confidence 34566666666543221 112233445555555555554211 1111 22 455555555555544222222
Q ss_pred cC--CCCCCCEEecC
Q 004268 87 IG--SLRDLLDLNLS 99 (764)
Q Consensus 87 ~~--~l~~L~~L~L~ 99 (764)
+. .+++|++|+|+
T Consensus 213 l~~~~lp~L~~L~L~ 227 (362)
T 2ra8_A 213 ILGSDLPNLEKLVLY 227 (362)
T ss_dssp HHHSBCTTCCEEEEE
T ss_pred HHHccCCCCcEEEEe
Confidence 22 34555555553
No 413
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.92 E-value=4.2e-10 Score=115.77 Aligned_cols=187 Identities=21% Similarity=0.207 Sum_probs=123.3
Q ss_pred ceeeeecCceeEEEEEECCCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcC-CCc--eeeEeeEEeeCC---EEEEEE
Q 004268 513 KYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIR-HRN--IVKLYGFCLHNK---CMFLIY 586 (764)
Q Consensus 513 ~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpn--iv~~~~~~~~~~---~~~lv~ 586 (764)
.+.++.|....||++. +.+++|+.... .....+.+|+++++.+. +.. +++++....... ..|+||
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~-----~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm 95 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS-----RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGF 95 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH-----HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEE
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc-----chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEE
Confidence 3558999999999873 56888886432 23467889999999883 332 456655544333 358899
Q ss_pred EecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhc-------------------------------------
Q 004268 587 EYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYD------------------------------------- 629 (764)
Q Consensus 587 e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~------------------------------------- 629 (764)
++++|.++..... ..++..+...++.+++..+..||..
T Consensus 96 ~~i~G~~l~~~~~-----~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (304)
T 3sg8_A 96 TKIKGVPLTPLLL-----NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQM 170 (304)
T ss_dssp ECCCCEECCHHHH-----HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHH
T ss_pred cccCCeECCcccc-----ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccH
Confidence 9999988765332 2356677778888888888888841
Q ss_pred ------------------CCCCcEEcCCCCCCeeecC--CCCEEEeeeccccccCCCCCCcee--------------ccc
Q 004268 630 ------------------CKPSIVHRDISSNNILLNS--NLEAFVADFGLARLLHPDSSNRTL--------------VVG 675 (764)
Q Consensus 630 ------------------~~~~iiH~Dlkp~NIll~~--~~~~kl~Dfg~~~~~~~~~~~~~~--------------~~g 675 (764)
....++|+|++|.||++++ ...+.++||+.+....+..+-... ...
T Consensus 171 ~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~ 250 (304)
T 3sg8_A 171 KKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILN 250 (304)
T ss_dssp HHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHH
Confidence 0135899999999999998 456789999998764321100000 000
Q ss_pred cccccc-ccccccCCCCccchHHHHHHHHHHHHhCCCCCCc
Q 004268 676 TYGYIA-PELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDL 715 (764)
Q Consensus 676 ~~~y~a-PE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~ 715 (764)
...... |+..... ....+.|++|.++|.+.+|..||-.
T Consensus 251 ~Y~~~~~~~~~~r~--~~~~~~~~l~~~~~~~~~g~~~~~~ 289 (304)
T 3sg8_A 251 HYKHKDIPTVLEKY--RMKEKYWSFEKIIYGKEYGYMDWYE 289 (304)
T ss_dssp HHTCSCHHHHHHHH--HHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HcCCCCcHHHHHHH--HHHHHHHHHHHHHHHHHcCCHHHHH
Confidence 001111 2221111 1236899999999999999998753
No 414
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.76 E-value=1.7e-08 Score=104.53 Aligned_cols=138 Identities=20% Similarity=0.182 Sum_probs=101.7
Q ss_pred cCCcceeeeecCceeEEEEEECCCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCC----CceeeEeeEEeeCCEEEE
Q 004268 509 DFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRH----RNIVKLYGFCLHNKCMFL 584 (764)
Q Consensus 509 ~y~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h----pniv~~~~~~~~~~~~~l 584 (764)
.+...+.++.|....||++ |+.+++|+.... .....+.+|.++++.+.+ ..+++++++ +..|+
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~-----~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~l 104 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKRD-----SVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFN 104 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESSH-----HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCE
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCcH-----HHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEE
Confidence 5666788999999999998 667888876332 223568899999999965 235666655 45689
Q ss_pred EEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcC----------------------------------
Q 004268 585 IYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDC---------------------------------- 630 (764)
Q Consensus 585 v~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---------------------------------- 630 (764)
||||++|.++..... ..++..+...++.+++..+..||...
T Consensus 105 vme~i~G~~l~~~~~-----~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (320)
T 3r70_A 105 IMKYIKGERITYEQY-----HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQ 179 (320)
T ss_dssp EEECCCCBCCCHHHH-----TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTT
T ss_pred EEeecCCcccccccc-----ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcc
Confidence 999999988864321 12455666677777888887777332
Q ss_pred --------------------------CCCcEEcCCCCCCeeecCCCCEEEeeeccccccC
Q 004268 631 --------------------------KPSIVHRDISSNNILLNSNLEAFVADFGLARLLH 664 (764)
Q Consensus 631 --------------------------~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~ 664 (764)
...++|+|++|.||+++.++.+.++||+.+....
T Consensus 180 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~~ 239 (320)
T 3r70_A 180 LLTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVGD 239 (320)
T ss_dssp CCCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEEC
T ss_pred cccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccCC
Confidence 1235999999999999986667999999986543
No 415
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.61 E-value=6e-09 Score=98.17 Aligned_cols=92 Identities=17% Similarity=0.210 Sum_probs=44.8
Q ss_pred ccccCCCCCcEEEcCCC-cCccc----CCccccCCCCCCEEEccCCcCccc----CCcccCCCCCCCEEecCCCccccc-
Q 004268 37 SEIGALSKLEKLVLSHN-SLTGR----IPSEIGALSRLKVLDLSYNRLTGT----IPSEIGSLRDLLDLNLSNNILNGS- 106 (764)
Q Consensus 37 ~~~~~l~~L~~L~Ls~n-~i~~~----~~~~~~~l~~L~~L~L~~n~i~~~----~~~~~~~l~~L~~L~L~~n~l~~~- 106 (764)
..+...+.|++|+|++| .+++. +...+...++|++|+|++|.|... +...+...++|++|+|++|.|+..
T Consensus 30 ~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g 109 (185)
T 1io0_A 30 RIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSG 109 (185)
T ss_dssp HHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHH
T ss_pred HHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHH
Confidence 34455556666666666 55421 223344455566666666655421 223334445555555555555532
Q ss_pred ---CCccCcCCCCCCEEEc--cCCcCc
Q 004268 107 ---IPLEFGNLKDLDQLRL--QGNKLD 128 (764)
Q Consensus 107 ---~~~~~~~l~~L~~L~L--~~n~l~ 128 (764)
...++...++|++|+| ++|.+.
T Consensus 110 ~~~l~~~L~~n~~L~~L~L~~~~N~i~ 136 (185)
T 1io0_A 110 ILALVEALQSNTSLIELRIDNQSQPLG 136 (185)
T ss_dssp HHHHHHGGGGCSSCCEEECCCCSSCCC
T ss_pred HHHHHHHHHhCCCceEEEecCCCCCCC
Confidence 1223344444555555 445544
No 416
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.54 E-value=9.7e-09 Score=96.71 Aligned_cols=67 Identities=9% Similarity=0.070 Sum_probs=32.2
Q ss_pred cccCCCCCCEEEccCC-cCccc----CCcccCCCCCCCEEecCCCcccccC----CccCcCCCCCCEEEccCCcCc
Q 004268 62 EIGALSRLKVLDLSYN-RLTGT----IPSEIGSLRDLLDLNLSNNILNGSI----PLEFGNLKDLDQLRLQGNKLD 128 (764)
Q Consensus 62 ~~~~l~~L~~L~L~~n-~i~~~----~~~~~~~l~~L~~L~L~~n~l~~~~----~~~~~~l~~L~~L~L~~n~l~ 128 (764)
.+...+.|++|+|++| .|... +...+...++|++|+|++|.|+... ...+...+.|++|+|++|.|.
T Consensus 31 ~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~ 106 (185)
T 1io0_A 31 IQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFIS 106 (185)
T ss_dssp HHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCC
T ss_pred HHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCC
Confidence 3445556666666665 55421 2334444555555555555554321 122233344555555555554
No 417
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.48 E-value=1e-06 Score=88.69 Aligned_cols=142 Identities=19% Similarity=0.170 Sum_probs=100.9
Q ss_pred hhcCCcceeeeecCce-eEEEEEEC-CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcC-CCceeeEeeEEeeCCEEE
Q 004268 507 TEDFHIKYCIGTGGYG-SVYRAQLS-SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIR-HRNIVKLYGFCLHNKCMF 583 (764)
Q Consensus 507 ~~~y~~~~~ig~G~~g-~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~~ 583 (764)
...|+. +.+..|..+ .||+.... ++..+++|+-... ....+.+|.+.++.+. +--++++++++.+.+..|
T Consensus 24 l~g~~~-~~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~------~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~ 96 (272)
T 4gkh_A 24 LYGYRW-ARDNVGQSGATIYRLYGKPNAPELFLKHGKGS------VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAW 96 (272)
T ss_dssp HTTCEE-EEEECSSSSCEEEEEECCTTCCCEEEEEEETH------HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEE
T ss_pred ccCCeE-EEccCCCcCCeEEEEEecCCCeEEEEEECCCC------CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEE
Confidence 344543 345556655 69988754 5667899986432 2367889999999884 444788999999999999
Q ss_pred EEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcC---------------------------------
Q 004268 584 LIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDC--------------------------------- 630 (764)
Q Consensus 584 lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~--------------------------------- 630 (764)
+|||+++|.++.+..... ......+..+++..+..||...
T Consensus 97 lvme~l~G~~~~~~~~~~-------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (272)
T 4gkh_A 97 LLTTAIPGKTAFQVLEEY-------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDD 169 (272)
T ss_dssp EEEECCCSEEHHHHHHHC-------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCG
T ss_pred EEEEeeCCccccccccCC-------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccc
Confidence 999999998887665421 1222345666666666666320
Q ss_pred ----------------------CCCcEEcCCCCCCeeecCCCCEEEeeeccccc
Q 004268 631 ----------------------KPSIVHRDISSNNILLNSNLEAFVADFGLARL 662 (764)
Q Consensus 631 ----------------------~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~ 662 (764)
...++|+|+++.|||+++++.+-|+||+.+..
T Consensus 170 ~~~~~~~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 170 ERNGWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp GGTTCCHHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred cccchHHHHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 11379999999999999877777999998864
No 418
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.42 E-value=1.9e-06 Score=88.16 Aligned_cols=138 Identities=17% Similarity=0.097 Sum_probs=94.5
Q ss_pred ceeeeecCceeEEEEEECCCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCC---ceeeEeeEEe-eCCEEEEEEEe
Q 004268 513 KYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHR---NIVKLYGFCL-HNKCMFLIYEY 588 (764)
Q Consensus 513 ~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp---niv~~~~~~~-~~~~~~lv~e~ 588 (764)
.+.++.|....||+. |+.+++|+... ......+.+|.++++.+.+. .+++++.+.. ..+..++|||+
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~~-----~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~ 94 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPKS-----QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRK 94 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESS-----HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEEC
T ss_pred eeecCCCcceeEEEE----CCEEEEEecCC-----chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEec
Confidence 456888998999998 56788887422 22346789999999999642 4677777764 45567899999
Q ss_pred cCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhc---------------------------------------
Q 004268 589 MERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYD--------------------------------------- 629 (764)
Q Consensus 589 ~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~--------------------------------------- 629 (764)
++|.++....-. .++..+...++.+++..|..||..
T Consensus 95 i~G~~l~~~~~~-----~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~ 169 (306)
T 3tdw_A 95 VQGQILGEDGMA-----VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLR 169 (306)
T ss_dssp CCSEECHHHHHT-----TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHH
T ss_pred cCCeECchhhhh-----hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhH
Confidence 999887653211 123333444444444444444421
Q ss_pred ------------------CCCCcEEcCCCCCCeeecC---CCCE-EEeeeccccccC
Q 004268 630 ------------------CKPSIVHRDISSNNILLNS---NLEA-FVADFGLARLLH 664 (764)
Q Consensus 630 ------------------~~~~iiH~Dlkp~NIll~~---~~~~-kl~Dfg~~~~~~ 664 (764)
....++|+|++|.||+++. ++.+ .|+||+.+....
T Consensus 170 ~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~gd 226 (306)
T 3tdw_A 170 DYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAISD 226 (306)
T ss_dssp HHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEEC
T ss_pred HHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCCC
Confidence 1346799999999999987 4555 799999886543
No 419
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.38 E-value=2.7e-08 Score=98.31 Aligned_cols=81 Identities=27% Similarity=0.245 Sum_probs=50.3
Q ss_pred CCCCCCCEEecCCCcccccC--CccCcCCCCCCEEEccCCcCcccCCccccCCC--CcCEEecccCcccccCC-------
Q 004268 88 GSLRDLLDLNLSNNILNGSI--PLEFGNLKDLDQLRLQGNKLDGLIPSSIGNLT--NLTYLDLSLNQLSGRLP------- 156 (764)
Q Consensus 88 ~~l~~L~~L~L~~n~l~~~~--~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~--~L~~L~L~~n~l~~~~~------- 156 (764)
..+++|+.|+|++|.|+++. +..+..+++|+.|+|++|+|+++ ..+..+. +|++|+|++|.+.+..+
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~ 244 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYIS 244 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHH
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHH
Confidence 44667777777777776532 34455677777777777777755 2333333 77777777777764332
Q ss_pred ccccCCCCCCeeec
Q 004268 157 QEVGNLKNLKSLFL 170 (764)
Q Consensus 157 ~~~~~l~~L~~L~L 170 (764)
..+..+++|+.|+-
T Consensus 245 ~il~~~P~L~~LDg 258 (267)
T 3rw6_A 245 AIRERFPKLLRLDG 258 (267)
T ss_dssp HHHHHCTTCCEESS
T ss_pred HHHHHCcccCeECC
Confidence 23556677777653
No 420
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.36 E-value=3.3e-08 Score=97.67 Aligned_cols=81 Identities=31% Similarity=0.325 Sum_probs=52.1
Q ss_pred cCCCCCCEEEccCCcCccc--CCcccCCCCCCCEEecCCCcccccC-CccCcCCCCCCEEEccCCcCcccCC-------c
Q 004268 64 GALSRLKVLDLSYNRLTGT--IPSEIGSLRDLLDLNLSNNILNGSI-PLEFGNLKDLDQLRLQGNKLDGLIP-------S 133 (764)
Q Consensus 64 ~~l~~L~~L~L~~n~i~~~--~~~~~~~l~~L~~L~L~~n~l~~~~-~~~~~~l~~L~~L~L~~n~l~~~~~-------~ 133 (764)
..+++|++|+|++|+|+++ ++..+..+++|+.|+|++|.|+++. ...+..+ +|++|+|++|.+.+-.| .
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~~~l~~l~~l-~L~~L~L~~Npl~~~~~~~~~y~~~ 245 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGL-KLEELWLDGNSLCDTFRDQSTYISA 245 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSGGGGGGGTTS-CCSEEECTTSTTGGGCSSHHHHHHH
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCchhhhhcccC-CcceEEccCCcCccccCcchhHHHH
Confidence 3566777777777777752 3455566777777777777777541 1223333 77888888887765333 2
Q ss_pred cccCCCCcCEEe
Q 004268 134 SIGNLTNLTYLD 145 (764)
Q Consensus 134 ~~~~l~~L~~L~ 145 (764)
.+..+++|+.||
T Consensus 246 il~~~P~L~~LD 257 (267)
T 3rw6_A 246 IRERFPKLLRLD 257 (267)
T ss_dssp HHHHCTTCCEES
T ss_pred HHHHCcccCeEC
Confidence 466778888876
No 421
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.36 E-value=2.6e-06 Score=86.05 Aligned_cols=76 Identities=18% Similarity=0.174 Sum_probs=59.8
Q ss_pred cceeeeecCceeEEEEEECCCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCC---ceeeEeeEEeeCCEEEEEEEe
Q 004268 512 IKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHR---NIVKLYGFCLHNKCMFLIYEY 588 (764)
Q Consensus 512 ~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp---niv~~~~~~~~~~~~~lv~e~ 588 (764)
-.+.++.|.++.||++...+|+.+++|+........ ...+.+|++.++.+.+. .+++++++. ..++||||
T Consensus 19 ~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~---~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~ 91 (288)
T 3d1u_A 19 AVAERGHSHRWHLYRVELADGTPLFVKALPDDAPAL---DGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEW 91 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCC---TTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEEC
T ss_pred ceeeeCCcchhheEEEEeCCCCeEEEEecCCCCcch---hHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEe
Confidence 356799999999999998889999999965432211 25678999999999764 578888764 25899999
Q ss_pred cCCCCH
Q 004268 589 MERGSL 594 (764)
Q Consensus 589 ~~~~~L 594 (764)
++++.+
T Consensus 92 l~g~~~ 97 (288)
T 3d1u_A 92 VDERPP 97 (288)
T ss_dssp CCCCCC
T ss_pred cccCCC
Confidence 999874
No 422
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.27 E-value=5.5e-06 Score=86.80 Aligned_cols=77 Identities=9% Similarity=0.114 Sum_probs=58.5
Q ss_pred cCCcceeeeecCceeEEEEEECCCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCC--ceeeEeeEEeeC-CEEEEE
Q 004268 509 DFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHR--NIVKLYGFCLHN-KCMFLI 585 (764)
Q Consensus 509 ~y~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp--niv~~~~~~~~~-~~~~lv 585 (764)
.....+.++.|....+|+... +++.+++|..... ..+.+|+.+++.+... .+++++.++... +..|+|
T Consensus 42 ~~~~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~--------~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv 112 (362)
T 3ovc_A 42 SVSDLMQLSEGEESRAFSFDV-GGRGYVLRVNSCA--------DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCI 112 (362)
T ss_dssp CCEEEEEEEECSSEEEEEEEE-TTEEEEEEEESCC--------HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEE
T ss_pred CCceEEECCCCCcceEEEEEE-CCcEEEEEeCCch--------hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEE
Confidence 344456789999999999876 4888999987432 3577899999998643 367788777664 668999
Q ss_pred EEecCCCCH
Q 004268 586 YEYMERGSL 594 (764)
Q Consensus 586 ~e~~~~~~L 594 (764)
|||++|.++
T Consensus 113 ~e~l~G~~l 121 (362)
T 3ovc_A 113 SRRAQGVTL 121 (362)
T ss_dssp EECCCSEET
T ss_pred EEecCCCCc
Confidence 999998655
No 423
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=98.14 E-value=5.2e-07 Score=82.39 Aligned_cols=34 Identities=18% Similarity=0.282 Sum_probs=14.3
Q ss_pred CcCEEecccCc-ccccCCccccCCCCCCeeecccC
Q 004268 140 NLTYLDLSLNQ-LSGRLPQEVGNLKNLKSLFLDNN 173 (764)
Q Consensus 140 ~L~~L~L~~n~-l~~~~~~~~~~l~~L~~L~L~~n 173 (764)
+|++|+|++|. |++..-..+.++++|++|+++++
T Consensus 115 ~L~~L~Ls~C~~ITD~Gl~~L~~~~~L~~L~L~~c 149 (176)
T 3e4g_A 115 SMLEMEIISCGNVTDKGIIALHHFRNLKYLFLSDL 149 (176)
T ss_dssp HCCEEEEESCTTCCHHHHHHGGGCTTCCEEEEESC
T ss_pred CCCEEEcCCCCcCCHHHHHHHhcCCCCCEEECCCC
Confidence 34444444442 43332233344444444444444
No 424
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.10 E-value=4.7e-06 Score=87.50 Aligned_cols=80 Identities=8% Similarity=0.011 Sum_probs=55.9
Q ss_pred ceee-eecCceeEEEEEEC-------CCCEEEEEEccCCC---CCcHHHHHHHHHHHHHHHhcC-C--CceeeEeeEEee
Q 004268 513 KYCI-GTGGYGSVYRAQLS-------SGKLVALKKLHRSE---TEEPAFLESFQTEARLLSQIR-H--RNIVKLYGFCLH 578 (764)
Q Consensus 513 ~~~i-g~G~~g~V~~~~~~-------~~~~vavK~~~~~~---~~~~~~~~~~~~E~~~l~~l~-h--pniv~~~~~~~~ 578 (764)
.+.+ +.|....+|+.... +++.+++|...... ... ...+.+|+++++.+. + -.+++++.+..+
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~---~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~ 101 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFP---TYRLDHQFEVIRLVGELTDVPVPRVRWIETT 101 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSS---CCCHHHHHHHHHHHHHHCCSCCCCEEEEECS
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCc---hhHHHHHHHHHHHHhhcCCCCCCcEEEEccC
Confidence 3567 78888999998654 26789999875432 100 134668888888884 2 357888888766
Q ss_pred C---CEEEEEEEecCCCCHH
Q 004268 579 N---KCMFLIYEYMERGSLF 595 (764)
Q Consensus 579 ~---~~~~lv~e~~~~~~L~ 595 (764)
. +..|+|||+++|..+.
T Consensus 102 ~~~~g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 102 GDVLGTPFFLMDYVEGVVPP 121 (357)
T ss_dssp STTTSSCEEEEECCCCBCCC
T ss_pred CCccCCceEEEEecCCCChh
Confidence 5 3568999999987654
No 425
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=98.09 E-value=8.2e-07 Score=81.06 Aligned_cols=84 Identities=13% Similarity=0.136 Sum_probs=42.0
Q ss_pred CCCCEEEccCCcCcccCCcccCCCCCCCEEecCCCc-ccccCCccCcCC----CCCCEEEccCCc-CcccCCccccCCCC
Q 004268 67 SRLKVLDLSYNRLTGTIPSEIGSLRDLLDLNLSNNI-LNGSIPLEFGNL----KDLDQLRLQGNK-LDGLIPSSIGNLTN 140 (764)
Q Consensus 67 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~-l~~~~~~~~~~l----~~L~~L~L~~n~-l~~~~~~~~~~l~~ 140 (764)
.+|+.|||++|.|+...-..+.++++|++|+|++|. ++...-..+..+ ++|++|+|++|. |+...-..+..+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 345566666655554434445555566666665553 443222233332 245566665553 54332233455555
Q ss_pred cCEEecccCc
Q 004268 141 LTYLDLSLNQ 150 (764)
Q Consensus 141 L~~L~L~~n~ 150 (764)
|++|+|+++.
T Consensus 141 L~~L~L~~c~ 150 (176)
T 3e4g_A 141 LKYLFLSDLP 150 (176)
T ss_dssp CCEEEEESCT
T ss_pred CCEEECCCCC
Confidence 6666655553
No 426
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=98.01 E-value=1.6e-05 Score=82.98 Aligned_cols=141 Identities=18% Similarity=0.279 Sum_probs=80.9
Q ss_pred eeeeecCceeEEEEEECCCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcC--CCceeeEee------EEeeCCEEEEE
Q 004268 514 YCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIR--HRNIVKLYG------FCLHNKCMFLI 585 (764)
Q Consensus 514 ~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~--hpniv~~~~------~~~~~~~~~lv 585 (764)
+.++.|..+.||++...+| .+++|+.... . ..+..|.++++.+. .-.+++++. +....+..+++
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~----~---~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l 109 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRP----E---KKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVV 109 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECSC----H---HHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEE
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCCC----H---HHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEE
Confidence 3466677889999987644 5899988652 1 33445566666553 113444443 22356778999
Q ss_pred EEecCCCCHH-----------HH---HhcCcc----cc-------ccCHHH-----------------------------
Q 004268 586 YEYMERGSLF-----------CV---LRNDVE----AV-------ELDWTK----------------------------- 611 (764)
Q Consensus 586 ~e~~~~~~L~-----------~~---l~~~~~----~~-------~l~~~~----------------------------- 611 (764)
|+|++|..+. .. ++.... .. ...|..
T Consensus 110 ~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 189 (346)
T 2q83_A 110 YDWIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYL 189 (346)
T ss_dssp EECCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHH
T ss_pred EEeecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHH
Confidence 9999986542 01 111000 00 011111
Q ss_pred --HHHHHHHHHHHHHHHHh----------cCCCCcEEcCCCCCCeeecCCCCEEEeeeccccc
Q 004268 612 --RVNIVKSMAHALSYLHY----------DCKPSIVHRDISSNNILLNSNLEAFVADFGLARL 662 (764)
Q Consensus 612 --~~~i~~qi~~aL~~LH~----------~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~ 662 (764)
...+..++..++++|+. ....+++|||+++.||+++.++.+.++||+.+..
T Consensus 190 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~ 252 (346)
T 2q83_A 190 QEIDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSF 252 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred HHHHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence 11112234445666652 0157899999999999998888999999998854
No 427
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.94 E-value=2.1e-05 Score=83.92 Aligned_cols=78 Identities=10% Similarity=0.077 Sum_probs=50.0
Q ss_pred ceeeeecCceeEEEEEEC-CCCEEEEEEccCCCC-CcH---HHHHHHHHHHHHHHhcCC---CceeeEeeEEeeCCEEEE
Q 004268 513 KYCIGTGGYGSVYRAQLS-SGKLVALKKLHRSET-EEP---AFLESFQTEARLLSQIRH---RNIVKLYGFCLHNKCMFL 584 (764)
Q Consensus 513 ~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~---~~~~~~~~E~~~l~~l~h---pniv~~~~~~~~~~~~~l 584 (764)
.+.+|.|..+.||++... +++.|++|....... ..+ ...+++..|.++++.+.. ..+++++.+. .+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~d--~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD--TEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE--TTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEEc--CCccEE
Confidence 467899999999999754 578999998653221 000 012456789999888732 3456676543 344579
Q ss_pred EEEecCCC
Q 004268 585 IYEYMERG 592 (764)
Q Consensus 585 v~e~~~~~ 592 (764)
|||++++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999864
No 428
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.76 E-value=0.00014 Score=73.94 Aligned_cols=75 Identities=21% Similarity=0.232 Sum_probs=60.8
Q ss_pred ceeeeecCceeEEEEEECCCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcC---CCceeeEeeEEeeCCEEEEEEEec
Q 004268 513 KYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIR---HRNIVKLYGFCLHNKCMFLIYEYM 589 (764)
Q Consensus 513 ~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~---hpniv~~~~~~~~~~~~~lv~e~~ 589 (764)
.+.++.|....+|+.... ++.+++|...... ...+..|++.++.+. ...+++++++....+..++||||+
T Consensus 41 ~~~l~gG~~n~~y~v~~~-~~~~vlK~~~~~~------~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l 113 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLINDE-VQTVFVKINERSY------RSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEAL 113 (312)
T ss_dssp EEEECCSSSSEEEEEESS-SCEEEEEEEEGGG------HHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECC
T ss_pred eEEeCCccceeeeEEEEC-CCeEEEEeCCccc------HHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEec
Confidence 456899999999999764 7789999875431 367889999998883 367889999988888999999999
Q ss_pred CCCCH
Q 004268 590 ERGSL 594 (764)
Q Consensus 590 ~~~~L 594 (764)
++..+
T Consensus 114 ~G~~~ 118 (312)
T 3jr1_A 114 NKSKN 118 (312)
T ss_dssp CCCCC
T ss_pred cCCCC
Confidence 98764
No 429
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.70 E-value=9.8e-06 Score=75.43 Aligned_cols=65 Identities=12% Similarity=0.191 Sum_probs=30.6
Q ss_pred cCCCCCcEEEcCCC-cCccc----CCccccCCCCCCEEEccCCcCccc----CCcccCCCCCCCEEecCCCccc
Q 004268 40 GALSKLEKLVLSHN-SLTGR----IPSEIGALSRLKVLDLSYNRLTGT----IPSEIGSLRDLLDLNLSNNILN 104 (764)
Q Consensus 40 ~~l~~L~~L~Ls~n-~i~~~----~~~~~~~l~~L~~L~L~~n~i~~~----~~~~~~~l~~L~~L~L~~n~l~ 104 (764)
..-+.|++|+|++| +|.+. +.+++...+.|+.|+|++|+|... +.+++...+.|++|+|++|.|+
T Consensus 38 ~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig 111 (197)
T 1pgv_A 38 EDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLT 111 (197)
T ss_dssp TTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCC
T ss_pred hcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCC
Confidence 33445555555553 44421 233344445555555555555421 2233334455555555555554
No 430
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.64 E-value=0.00021 Score=76.56 Aligned_cols=78 Identities=10% Similarity=0.056 Sum_probs=49.4
Q ss_pred CCCcEEcCCCCCCeeecCCCCEEEeeeccccccCCCCCCceeccc--ccccccccccccC---CCCccchHHHHHHHHHH
Q 004268 631 KPSIVHRDISSNNILLNSNLEAFVADFGLARLLHPDSSNRTLVVG--TYGYIAPELAYTM---AVTEKCDVYSFGVVALE 705 (764)
Q Consensus 631 ~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g--~~~y~aPE~~~~~---~~~~~~DiwslG~il~~ 705 (764)
...++|||++|.|||++.++ ++++||+.+....+..+ ...... ...|.+|+..... ......++.+.+..+|+
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~D-la~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFD-IGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWN 308 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHH-HHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHH
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHH-HHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHH
Confidence 67999999999999998776 99999999875432111 111111 1346666654311 11223455677888888
Q ss_pred HHhCC
Q 004268 706 VLMGS 710 (764)
Q Consensus 706 lltg~ 710 (764)
.+.++
T Consensus 309 ~y~~~ 313 (420)
T 2pyw_A 309 LFNKR 313 (420)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87654
No 431
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.64 E-value=0.00037 Score=70.42 Aligned_cols=79 Identities=18% Similarity=0.209 Sum_probs=57.8
Q ss_pred cCCcceeeeecCceeEEEEEECCCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcC-C--CceeeEeeEEeeCCEEEEE
Q 004268 509 DFHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIR-H--RNIVKLYGFCLHNKCMFLI 585 (764)
Q Consensus 509 ~y~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h--pniv~~~~~~~~~~~~~lv 585 (764)
+..-++.+|.|..+.||+.+..+|+.|++|+......... ..+..|++.++.+. . --+++++++. . .++|
T Consensus 16 ~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~---~~~~~Ea~~L~~L~~~~~vpvP~v~~~~--~--~~lv 88 (288)
T 3f7w_A 16 EVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALD---GLFRAEALGLDWLGRSFGSPVPQVAGWD--D--RTLA 88 (288)
T ss_dssp CEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCT---THHHHHHHHHHHHTCSTTCCSCCEEEEE--T--TEEE
T ss_pred CeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchh---hHHHHHHHHHHHHHhhCCCCcceEEecc--C--ceEE
Confidence 4455677999999999999999999999998765443221 45778999999884 2 2356666543 2 3689
Q ss_pred EEecCCCCH
Q 004268 586 YEYMERGSL 594 (764)
Q Consensus 586 ~e~~~~~~L 594 (764)
|||++++..
T Consensus 89 ~e~l~~~~~ 97 (288)
T 3f7w_A 89 MEWVDERPP 97 (288)
T ss_dssp EECCCCCCC
T ss_pred EEeecccCC
Confidence 999987653
No 432
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.63 E-value=1.2e-05 Score=74.84 Aligned_cols=62 Identities=13% Similarity=0.160 Sum_probs=30.1
Q ss_pred CCCcCEEecccCcccccC----CccccCCCCCCeeecccCCC---CC----CCCCccccCCCccEEEecCccC
Q 004268 138 LTNLTYLDLSLNQLSGRL----PQEVGNLKNLKSLFLDNNHL---SG----PIPSTLYHLNQLATLCLGYNKL 199 (764)
Q Consensus 138 l~~L~~L~L~~n~l~~~~----~~~~~~l~~L~~L~L~~n~i---~~----~~~~~~~~l~~L~~L~l~~n~i 199 (764)
-+.|++|+|+.|.|.... ..++...+.|++|+|++|.. .. ....++...++|+.|+++.|.+
T Consensus 97 N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 97 SPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASM 169 (197)
T ss_dssp CSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCH
T ss_pred CCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCc
Confidence 345555555555554221 22344445566666654422 21 0122345556666666666554
No 433
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.56 E-value=0.0009 Score=68.96 Aligned_cols=160 Identities=13% Similarity=0.120 Sum_probs=91.8
Q ss_pred ccCHHHHHHHhhcCCc-----ceeeeecCceeEEEEEECCCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCC--Cce
Q 004268 497 RITFEEMIEATEDFHI-----KYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRH--RNI 569 (764)
Q Consensus 497 ~~~~~~~~~~~~~y~~-----~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h--pni 569 (764)
.++.+.+....+.|.+ ...++ |....||++...+|+.+++|........ ...+..|..+++.+.. -.+
T Consensus 10 ~l~~~~i~~~l~~~g~~~~~~~~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~~----~~~~~~E~~~~~~L~~~g~~v 84 (328)
T 1zyl_A 10 TLHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDEDRRRFVVKFYRPERWT----ADQILEEHQFALQLVNDEVPV 84 (328)
T ss_dssp CCCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCTTCCCEEEEEECTTTSC----HHHHHHHHHHHHHHHHTTCSB
T ss_pred CCCHHHHHHHHHHcCCCCCceEEeec-CcccceEEEEcCCCCEEEEEEcCCCCCC----HHHHHHHHHHHHHHHHcCCee
Confidence 3455666655565543 23466 7788999987767778999998644322 1456678888887732 124
Q ss_pred eeEeeE-----EeeCCEEEEEEEecCCCCHH-----H------H---Hhc---Ccc---ccccCHHHH------------
Q 004268 570 VKLYGF-----CLHNKCMFLIYEYMERGSLF-----C------V---LRN---DVE---AVELDWTKR------------ 612 (764)
Q Consensus 570 v~~~~~-----~~~~~~~~lv~e~~~~~~L~-----~------~---l~~---~~~---~~~l~~~~~------------ 612 (764)
++++.. ....+..+++|++++|..+. . . ++. ... ....++...
T Consensus 85 p~~~~~~g~~~~~~~g~~~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 164 (328)
T 1zyl_A 85 AAPVAFNGQTLLNHQGFYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDAT 164 (328)
T ss_dssp CCCCCBTTBSCEEETTEEEEEEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCS
T ss_pred cceeecCCcEEEEECCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcC
Confidence 444442 22356678999999885431 0 0 010 000 011121110
Q ss_pred ----------HHHHHHHHHHHHHHHh-cCCCCcEEcCCCCCCeeecCCCCEEEeeecccccc
Q 004268 613 ----------VNIVKSMAHALSYLHY-DCKPSIVHRDISSNNILLNSNLEAFVADFGLARLL 663 (764)
Q Consensus 613 ----------~~i~~qi~~aL~~LH~-~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~ 663 (764)
...+.+++..++..-. .....++|||+++.||+++ + .+.++||+.+...
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~g 224 (328)
T 1zyl_A 165 LIPSGLKAAFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARNG 224 (328)
T ss_dssp SSCTTTHHHHHHHHHHHHHHHHHHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCEE
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCcC
Confidence 1111122222222210 0256789999999999999 4 8999999987643
No 434
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.45 E-value=0.0011 Score=68.00 Aligned_cols=159 Identities=13% Similarity=0.135 Sum_probs=89.7
Q ss_pred cCHHHHHHHhhcCCcc-----eeeeecCceeEEEEEECCCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCC--cee
Q 004268 498 ITFEEMIEATEDFHIK-----YCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHR--NIV 570 (764)
Q Consensus 498 ~~~~~~~~~~~~y~~~-----~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp--niv 570 (764)
++.+++.....+|.+. +.++.|....+|++...+| .+++|........ +.+..|.++++.+... .++
T Consensus 7 ~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~~~-----~~l~~e~~~l~~L~~~g~~vP 80 (322)
T 2ppq_A 7 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRVEK-----NDLPFFLGLMQHLAAKGLSCP 80 (322)
T ss_dssp CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC---C-----CHHHHHHHHHHHHHHTTCCCC
T ss_pred CCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCCCH-----HHHHHHHHHHHHHHHCCCCCC
Confidence 5566677777777652 3466788889999987655 6889988653211 3455788887777321 134
Q ss_pred eEeeE------EeeCCEEEEEEEecCCCCHHH-----------H---HhcCc---cccc---c---CHHHHHH-------
Q 004268 571 KLYGF------CLHNKCMFLIYEYMERGSLFC-----------V---LRNDV---EAVE---L---DWTKRVN------- 614 (764)
Q Consensus 571 ~~~~~------~~~~~~~~lv~e~~~~~~L~~-----------~---l~~~~---~~~~---l---~~~~~~~------- 614 (764)
+++.. ....+..+++|+|++|..+.. . ++... .... . .|.....
T Consensus 81 ~~~~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 160 (322)
T 2ppq_A 81 LPLPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERAD 160 (322)
T ss_dssp CBCCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGG
T ss_pred cccCCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHH
Confidence 44421 223466789999999865310 0 11000 0000 0 1111000
Q ss_pred -----HHHHHHHHHHHHHhc----CCCCcEEcCCCCCCeeecCCCCEEEeeeccccc
Q 004268 615 -----IVKSMAHALSYLHYD----CKPSIVHRDISSNNILLNSNLEAFVADFGLARL 662 (764)
Q Consensus 615 -----i~~qi~~aL~~LH~~----~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~ 662 (764)
+...+...+++++.. ...+++|+|+++.||++++++.+.++||+.+..
T Consensus 161 ~~~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~ 217 (322)
T 2ppq_A 161 EVEKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN 217 (322)
T ss_dssp GTSTTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred hhhhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence 001133444555421 145899999999999999876568999998754
No 435
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.41 E-value=0.00052 Score=70.96 Aligned_cols=142 Identities=20% Similarity=0.193 Sum_probs=75.8
Q ss_pred eeeecCcee-EEEEEECCCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcC--CCceeeEeeEEeeCCEEEEEEEecCC
Q 004268 515 CIGTGGYGS-VYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIR--HRNIVKLYGFCLHNKCMFLIYEYMER 591 (764)
Q Consensus 515 ~ig~G~~g~-V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~--hpniv~~~~~~~~~~~~~lv~e~~~~ 591 (764)
.++.|.... +|+....+|+.+++|....... ..+..|+++++.+. .-.+++++.+....+ +++||++.+
T Consensus 25 ~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~------~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~ 96 (333)
T 3csv_A 25 PLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG------GDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGD 96 (333)
T ss_dssp C--------CCEEEECTTCCEEEEEECCTTTT------CCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCS
T ss_pred ECCCCCCCceEEEEEcCCCCeEEEEECCCCCC------ccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCC
Confidence 455554444 6677654477888886554321 22345677777663 234667777644444 689999987
Q ss_pred CCHHHHHhcCcc-----------------------ccccCHHHHH-------HH-------------HHHHHHHHHHHH-
Q 004268 592 GSLFCVLRNDVE-----------------------AVELDWTKRV-------NI-------------VKSMAHALSYLH- 627 (764)
Q Consensus 592 ~~L~~~l~~~~~-----------------------~~~l~~~~~~-------~i-------------~~qi~~aL~~LH- 627 (764)
..+.+.+..... ...++..... .+ ...+..+++.+.
T Consensus 97 ~~l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~ 176 (333)
T 3csv_A 97 ALFTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILS 176 (333)
T ss_dssp CBHHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHH
T ss_pred cchHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHH
Confidence 676544421100 0111111100 00 011112222221
Q ss_pred --hcCCCCcEEcCCCCCCeeecCC----CCEEEeeeccccccC
Q 004268 628 --YDCKPSIVHRDISSNNILLNSN----LEAFVADFGLARLLH 664 (764)
Q Consensus 628 --~~~~~~iiH~Dlkp~NIll~~~----~~~kl~Dfg~~~~~~ 664 (764)
......++|||+.+.|||++.+ +.+.++||+.+....
T Consensus 177 ~~~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G~ 219 (333)
T 3csv_A 177 AQLEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLGH 219 (333)
T ss_dssp HHCCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEEC
T ss_pred hcccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcCC
Confidence 1125689999999999999874 678999999987543
No 436
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=97.23 E-value=0.00085 Score=70.06 Aligned_cols=141 Identities=18% Similarity=0.238 Sum_probs=83.8
Q ss_pred eeeeecCceeEEEEEEC--------CCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcC-CCceeeEeeEEeeCCEEEE
Q 004268 514 YCIGTGGYGSVYRAQLS--------SGKLVALKKLHRSETEEPAFLESFQTEARLLSQIR-HRNIVKLYGFCLHNKCMFL 584 (764)
Q Consensus 514 ~~ig~G~~g~V~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~~l 584 (764)
+.+..|-...+|++... +++.+++|+..... .. ...+.+|.++++.+. +.-.+++++.+.+ .+
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~-~~---~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~ 127 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAIL-QG---VDSLVLESVMFAILAERSLGPQLYGVFPE----GR 127 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CC---HHHHHHHHHHHHHHHHTTSSCCEEEEETT----EE
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCcc-ch---HHHHHHHHHHHHHHHhcCCCCeEEEEcCC----cc
Confidence 45777888899999764 35789999864321 11 245568999998883 3334777776654 28
Q ss_pred EEEecCCCCHHH-----------H---H---hcC-cc-cccc--CHHHHHHHHHHHHH-------------------HHH
Q 004268 585 IYEYMERGSLFC-----------V---L---RND-VE-AVEL--DWTKRVNIVKSMAH-------------------ALS 624 (764)
Q Consensus 585 v~e~~~~~~L~~-----------~---l---~~~-~~-~~~l--~~~~~~~i~~qi~~-------------------aL~ 624 (764)
||||++|.++.. + + +.. .. .... -+.++.++..++.. .++
T Consensus 128 v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 207 (379)
T 3feg_A 128 LEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMG 207 (379)
T ss_dssp EEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHH
T ss_pred EEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHH
Confidence 999999865421 0 1 000 00 1111 23455555544422 123
Q ss_pred HHH----h-cCCCCcEEcCCCCCCeeecCC----CCEEEeeeccccc
Q 004268 625 YLH----Y-DCKPSIVHRDISSNNILLNSN----LEAFVADFGLARL 662 (764)
Q Consensus 625 ~LH----~-~~~~~iiH~Dlkp~NIll~~~----~~~kl~Dfg~~~~ 662 (764)
+|. . .....++|+|+.+.||+++.+ +.+.++||..+..
T Consensus 208 ~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 208 NLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 322 1 124578999999999999876 7899999998864
No 437
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=97.22 E-value=0.00093 Score=71.45 Aligned_cols=73 Identities=22% Similarity=0.220 Sum_probs=49.6
Q ss_pred ceeeeecCceeEEEEEECC--------CCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcC-CCceeeEeeEEeeCCEEE
Q 004268 513 KYCIGTGGYGSVYRAQLSS--------GKLVALKKLHRSETEEPAFLESFQTEARLLSQIR-HRNIVKLYGFCLHNKCMF 583 (764)
Q Consensus 513 ~~~ig~G~~g~V~~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~~ 583 (764)
.+.|+.|....+|++...+ ++.+++|+...... .+.+.+|..+++.+. +.-.+++++.+.+ .
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~~-----~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g 148 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPET-----ESHLVAESVIFTLLSERHLGPKLYGIFSG----G 148 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCCC-----HHHHHHHHHHHHHHHHTTSSSCEEEEETT----E
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCCc-----HHHHHHHHHHHHHHHhCCCCCcEEEEeCC----C
Confidence 4567888889999998653 57899999844211 134457999888884 3334677776542 2
Q ss_pred EEEEecCCCCH
Q 004268 584 LIYEYMERGSL 594 (764)
Q Consensus 584 lv~e~~~~~~L 594 (764)
+|+||++|.++
T Consensus 149 ~v~e~l~G~~l 159 (429)
T 1nw1_A 149 RLEEYIPSRPL 159 (429)
T ss_dssp EEECCCCEEEC
T ss_pred EEEEEeCCccc
Confidence 88999987443
No 438
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.18 E-value=0.00099 Score=67.70 Aligned_cols=139 Identities=12% Similarity=0.072 Sum_probs=75.9
Q ss_pred ceeeeecCceeEEEEEECCCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcC-CCceeeEeeEEeeCCEEEEEEEec-C
Q 004268 513 KYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIR-HRNIVKLYGFCLHNKCMFLIYEYM-E 590 (764)
Q Consensus 513 ~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~~lv~e~~-~ 590 (764)
.+.++.|....+|++ +.+++|+........ ....+|+.+++.+. +.-.++++++..+ .-++++||+ +
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~~----~~r~~E~~~l~~l~~~g~~P~~~~~~~~--~~~~v~e~i~~ 91 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEEY----INRANEAVAAREAAKAGVSPEVLHVDPA--TGVMVTRYIAG 91 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC----C----CCHHHHHHHHHHHHHTTSSCCEEEECTT--TCCEEEECCTT
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccce----eCHHHHHHHHHHHHHcCCCCceEEEECC--CCEEEEeecCC
Confidence 677999999999999 568888876532110 12246787777773 2222566655433 346899999 6
Q ss_pred CCCHHHH---------------H---hcCcc--ccccC-HHHHHHHHHH--------------HHHHH----HHHH-hcC
Q 004268 591 RGSLFCV---------------L---RNDVE--AVELD-WTKRVNIVKS--------------MAHAL----SYLH-YDC 630 (764)
Q Consensus 591 ~~~L~~~---------------l---~~~~~--~~~l~-~~~~~~i~~q--------------i~~aL----~~LH-~~~ 630 (764)
|.++... + +.... ....+ ...+..+..+ +...+ +.+. ...
T Consensus 92 g~~l~~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~ 171 (301)
T 3dxq_A 92 AQTMSPEKFKTRPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSALAAHPL 171 (301)
T ss_dssp CEECCHHHHHHSTTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHHHHHHHHSSCC
T ss_pred CccCCHhhHhhhHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhcCC
Confidence 6544210 0 00000 00000 1111111110 11111 1111 012
Q ss_pred CCCcEEcCCCCCCeeecCCCCEEEeeecccccc
Q 004268 631 KPSIVHRDISSNNILLNSNLEAFVADFGLARLL 663 (764)
Q Consensus 631 ~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~ 663 (764)
...++|+|+.|.||+ ..++.+.++||..+...
T Consensus 172 ~~~l~HgDl~~~Nil-~~~~~~~lID~e~a~~g 203 (301)
T 3dxq_A 172 PLAACHCDPLCENFL-DTGERMWIVDWEYSGMN 203 (301)
T ss_dssp CCEEECSCCCGGGEE-ECSSCEEECCCTTCEEE
T ss_pred CceeeccCCCcCCEE-ECCCCEEEEecccccCC
Confidence 446899999999999 56678899999988654
No 439
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.14 E-value=0.00037 Score=60.55 Aligned_cols=37 Identities=22% Similarity=0.302 Sum_probs=20.6
Q ss_pred cceeecccccccCCCCCCCCCCCccceecCCCCcccc
Q 004268 357 FRQLDLSRNFINGTIPSQLGKIPNISAVDLSKNNLSG 393 (764)
Q Consensus 357 L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~ 393 (764)
|+.|+|++|+|+.+.+..|..+++|+.|+|++|++.+
T Consensus 33 l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~C 69 (130)
T 3rfe_A 33 TTELVLTGNNLTALPPGLLDALPALRTAHLGANPWRC 69 (130)
T ss_dssp CSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCBC
T ss_pred CCEEECCCCcCCccChhhhhhccccCEEEecCCCeec
Confidence 4555555555554555555555555555555555554
No 440
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.06 E-value=0.00094 Score=57.97 Aligned_cols=34 Identities=32% Similarity=0.430 Sum_probs=13.1
Q ss_pred CCEEEccCCcCcccCCccccCCCCcCEEecccCc
Q 004268 117 LDQLRLQGNKLDGLIPSSIGNLTNLTYLDLSLNQ 150 (764)
Q Consensus 117 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 150 (764)
|++|+|++|+|+.+.++.|..+++|+.|+|++|.
T Consensus 33 l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP 66 (130)
T 3rfe_A 33 TTELVLTGNNLTALPPGLLDALPALRTAHLGANP 66 (130)
T ss_dssp CSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSC
T ss_pred CCEEECCCCcCCccChhhhhhccccCEEEecCCC
Confidence 3333333333333333333333333344444433
No 441
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.94 E-value=0.0051 Score=66.01 Aligned_cols=74 Identities=18% Similarity=0.142 Sum_probs=48.1
Q ss_pred ceeeeecCceeEEEEEECC-CCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCc-eeeEeeEEeeCCEEEEEEEecC
Q 004268 513 KYCIGTGGYGSVYRAQLSS-GKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRN-IVKLYGFCLHNKCMFLIYEYME 590 (764)
Q Consensus 513 ~~~ig~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpn-iv~~~~~~~~~~~~~lv~e~~~ 590 (764)
.+.|+.|-...+|++...+ ++.+++|+.......- -...+|..+++.+...+ .+++++.+. +. .||||++
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~----idR~~E~~vl~~L~~~gl~P~ll~~~~--~G--~v~e~I~ 184 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEI----INREREKKISCILYNKNIAKKIYVFFT--NG--RIEEFMD 184 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCSC----SCHHHHHHHHHHHTTSSSBCCEEEEET--TE--EEEECCC
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhhh----cCHHHHHHHHHHHHhcCCCCCEEEEeC--Ce--EEEEeeC
Confidence 4568888889999998764 4789999875432111 11247899999985433 467777763 32 5999998
Q ss_pred CCCH
Q 004268 591 RGSL 594 (764)
Q Consensus 591 ~~~L 594 (764)
|.++
T Consensus 185 G~~l 188 (458)
T 2qg7_A 185 GYAL 188 (458)
T ss_dssp SEEC
T ss_pred CccC
Confidence 7544
No 442
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.89 E-value=0.0056 Score=63.19 Aligned_cols=33 Identities=24% Similarity=0.441 Sum_probs=28.9
Q ss_pred CCCcEEcCCCCCCeeecCCCCEEEeeecccccc
Q 004268 631 KPSIVHRDISSNNILLNSNLEAFVADFGLARLL 663 (764)
Q Consensus 631 ~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~ 663 (764)
..+++|+|+.+.||++++++.+.++||+.+...
T Consensus 205 ~~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~~ 237 (339)
T 3i1a_A 205 KYVLCHSDIHAGNVLVGNEESIYIIDWDEPMLA 237 (339)
T ss_dssp GCEEECSCCCGGGEEECGGGCEEECCCSSCEEE
T ss_pred CceeEeCCCCcCCEEEeCCCeEEEEECCCCeeC
Confidence 457999999999999998888999999887654
No 443
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.81 E-value=0.0019 Score=67.66 Aligned_cols=74 Identities=16% Similarity=0.103 Sum_probs=44.6
Q ss_pred ceeeeecCceeEEEEEECC---------CCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcC-CCceeeEeeEEeeCCEE
Q 004268 513 KYCIGTGGYGSVYRAQLSS---------GKLVALKKLHRSETEEPAFLESFQTEARLLSQIR-HRNIVKLYGFCLHNKCM 582 (764)
Q Consensus 513 ~~~ig~G~~g~V~~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~ 582 (764)
.+.++.|....+|++...+ ++.+++|+....... ......|.++++.+. +.-++++++.. .+
T Consensus 38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~----~~~~~~E~~~l~~L~~~g~~P~~~~~~--~~-- 109 (369)
T 3c5i_A 38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDE----LYNTISEFEVYKTMSKYKIAPQLLNTF--NG-- 109 (369)
T ss_dssp EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGG----TSCHHHHHHHHHHHHHTTSSCCEEEEE--TT--
T ss_pred EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccc----eecHHHHHHHHHHHHhcCCCCceEEec--CC--
Confidence 3457788888999997653 278999987543211 012357888888874 32255777554 22
Q ss_pred EEEEEecCCCCH
Q 004268 583 FLIYEYMERGSL 594 (764)
Q Consensus 583 ~lv~e~~~~~~L 594 (764)
++||||++|..+
T Consensus 110 ~~v~e~i~G~~l 121 (369)
T 3c5i_A 110 GRIEEWLYGDPL 121 (369)
T ss_dssp EEEEECCCSEEC
T ss_pred cEEEEEecCCcC
Confidence 689999987543
No 444
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=96.32 E-value=0.012 Score=61.50 Aligned_cols=145 Identities=17% Similarity=0.196 Sum_probs=84.2
Q ss_pred eeeeecCceeEEEEEECC--------CCEEEEEEccCCCCC-----------cHH----HHHHHHHHHHHHHhcC-CCce
Q 004268 514 YCIGTGGYGSVYRAQLSS--------GKLVALKKLHRSETE-----------EPA----FLESFQTEARLLSQIR-HRNI 569 (764)
Q Consensus 514 ~~ig~G~~g~V~~~~~~~--------~~~vavK~~~~~~~~-----------~~~----~~~~~~~E~~~l~~l~-hpni 569 (764)
+.+..|-...+|++...+ ++.|++++.-..... +.. ..+.+..|.++++.+. +.-.
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 456678888999987653 378999987543210 000 0122335888888883 5556
Q ss_pred eeEeeEEeeCCEEEEEEEecCCCCHHH-------H-------H---hcC-cc-ccccC--HHHHHHHHHHHH--------
Q 004268 570 VKLYGFCLHNKCMFLIYEYMERGSLFC-------V-------L---RND-VE-AVELD--WTKRVNIVKSMA-------- 620 (764)
Q Consensus 570 v~~~~~~~~~~~~~lv~e~~~~~~L~~-------~-------l---~~~-~~-~~~l~--~~~~~~i~~qi~-------- 620 (764)
+++++++..+ +|+||++|.+|.. . + +.. .. ..... +..+.++..++.
T Consensus 138 Pkl~~~~~~G----~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~ 213 (401)
T 3f2s_A 138 PKLYGIFPQG----RLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEES 213 (401)
T ss_dssp CCEEEEETTE----EEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHH
T ss_pred CeEEEEeCCC----eEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchh
Confidence 7788776532 8899998755421 0 0 000 00 11111 233444443321
Q ss_pred --------------HHH----HHHHh-cCCCCcEEcCCCCCCeeecCC------CCEEEeeeccccc
Q 004268 621 --------------HAL----SYLHY-DCKPSIVHRDISSNNILLNSN------LEAFVADFGLARL 662 (764)
Q Consensus 621 --------------~aL----~~LH~-~~~~~iiH~Dlkp~NIll~~~------~~~kl~Dfg~~~~ 662 (764)
..+ +++.. .....++|+|+.+.||+++.+ +.+.++||..|..
T Consensus 214 ~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~ 280 (401)
T 3f2s_A 214 RIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCEE
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCCc
Confidence 112 22221 124578999999999999876 7899999998864
No 445
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=95.83 E-value=0.04 Score=58.27 Aligned_cols=141 Identities=9% Similarity=0.088 Sum_probs=84.8
Q ss_pred ceeeeecCceeEEEEEECC--------CCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcC-CCceeeEeeEEeeCCEEE
Q 004268 513 KYCIGTGGYGSVYRAQLSS--------GKLVALKKLHRSETEEPAFLESFQTEARLLSQIR-HRNIVKLYGFCLHNKCMF 583 (764)
Q Consensus 513 ~~~ig~G~~g~V~~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~~ 583 (764)
.+.+..|-...+|++...+ ++.+++|+.......- -...+|.++++.+. +.-.+++++.+. + +
T Consensus 75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~~----idR~~E~~~l~~L~~~gi~P~l~~~~~--~--~ 146 (424)
T 3mes_A 75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGKF----YDSKVELDVFRYLSNINIAPNIIADFP--E--G 146 (424)
T ss_dssp EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-CC----CCHHHHHHHHHHHHHTTSSCCEEEEET--T--E
T ss_pred EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcchh----cCHHHHHHHHHHHHhcCCCCCEEEEcC--C--C
Confidence 4557778889999997653 6889999875432110 12347888888883 333566765432 2 6
Q ss_pred EEEEecCCCCHHH-------H-------Hh---c-Cc---------cccccCHHHHHHHHHHHH----------------
Q 004268 584 LIYEYMERGSLFC-------V-------LR---N-DV---------EAVELDWTKRVNIVKSMA---------------- 620 (764)
Q Consensus 584 lv~e~~~~~~L~~-------~-------l~---~-~~---------~~~~l~~~~~~~i~~qi~---------------- 620 (764)
.||||++|.++.. . +. . .. ...+..+.++.++..++-
T Consensus 147 ~I~efI~G~~l~~~~l~~~~~~~~ia~~La~LH~~~~~~~~L~~~~~~~p~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~ 226 (424)
T 3mes_A 147 RIEEFIDGEPLTTKQLQLTHICVEVAKNMGSLHIINSKRADFPSRFDKEPILFKRIYLWREEAKIQVSKNNFQIDKELYS 226 (424)
T ss_dssp EEEECCCSEECCTGGGGSHHHHHHHHHHHHHHHTHHHHCTTSCTTSCCSCCHHHHHHHHHHHHHHHHHTCC--CCHHHHH
T ss_pred EEEEEeCCccCChhhcCCHHHHHHHHHHHHHHhcCchhhccCccccCCCCcHHHHHHHHHHHHHHhhcccchhhccccHH
Confidence 8899999865311 0 00 0 00 001112344444443322
Q ss_pred ---HHHHHHH---------------------hcCCCCcEEcCCCCCCeeecCCCCEEEeeeccccc
Q 004268 621 ---HALSYLH---------------------YDCKPSIVHRDISSNNILLNSNLEAFVADFGLARL 662 (764)
Q Consensus 621 ---~aL~~LH---------------------~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~ 662 (764)
..+.+|. ......++|+|+.+.||+ +.++.+.++||..+..
T Consensus 227 ~l~~e~~~L~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~ 291 (424)
T 3mes_A 227 KILEEIDQLEELIMGGEKFSMERALELKLYSPAFSLVFAHNDLQENNLL-QTQNNIRMIDYEYSAI 291 (424)
T ss_dssp HHHHHHHHHHHHHHTSSCCCHHHHHHHHTTCGGGCEEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred HHHHHHHHHHHHHhhhcccccccccccccccCCCCceEECCCCCcccee-cCCCcEEEEecccCCc
Confidence 2223322 111356899999999999 8888999999999864
No 446
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=95.04 E-value=0.1 Score=48.66 Aligned_cols=124 Identities=15% Similarity=0.097 Sum_probs=80.4
Q ss_pred CCHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCeeecCCCCEEEeeeccccccCCCCCCce
Q 004268 592 GSLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNNILLNSNLEAFVADFGLARLLHPDSSNRT 671 (764)
Q Consensus 592 ~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 671 (764)
-+|.++++. ...++++++++.++.|.+.+|.-.-. ++.-..+=+.|..|++..+|.|.+.+ +.+.
T Consensus 33 vSL~eIL~~--~~~PlsEEqaWALc~Qc~~~L~~~~~--~~~~~~~i~~~~~i~l~~dG~V~f~~-~~s~---------- 97 (229)
T 2yle_A 33 LSLEEILRL--YNQPINEEQAWAVCYQCCGSLRAAAR--RRQPRHRVRSAAQIRVWRDGAVTLAP-AADD---------- 97 (229)
T ss_dssp EEHHHHHHH--HTSCCCHHHHHHHHHHHHHHHHHHHH--TTCCCCCCCSGGGEEEETTSCEEECC-C-------------
T ss_pred ccHHHHHHH--cCCCcCHHHHHHHHHHHHHHHHhhhh--cccCCceecCCcceEEecCCceeccc-cccc----------
Confidence 378899875 45679999999999999999888721 11111233457899999999888764 1110
Q ss_pred ecccccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccccccccCCcCCCCCCCcHHHHHHHhhhhcc
Q 004268 672 LVVGTYGYIAPELAYTMAVTEKCDVYSFGVVALEVLMGSHPTDLLSSLSSSSGRKISQNPRLDLQCNAYLKNFSQG 747 (764)
Q Consensus 672 ~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~lltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 747 (764)
.....+.|||... ...+.+.=|||||+++|..+-=..|= .+.+.++.++..+|..|...
T Consensus 98 --~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~e--------------~eE~eLS~~LE~LL~~Mt~~ 156 (229)
T 2yle_A 98 --AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLKE--------------NEERELSPPLEQLIDHMANT 156 (229)
T ss_dssp -----------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCCT--------------TEEECCCHHHHHHHHHHTTC
T ss_pred --ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCCc--------------ccchhhCHHHHHHHHHHHhc
Confidence 1233566888753 34567788999999999998643332 23456788888888777654
No 447
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=93.77 E-value=0.23 Score=52.33 Aligned_cols=31 Identities=26% Similarity=0.412 Sum_probs=26.0
Q ss_pred CcEEcCCCCCCeee------cCCCCEEEeeecccccc
Q 004268 633 SIVHRDISSNNILL------NSNLEAFVADFGLARLL 663 (764)
Q Consensus 633 ~iiH~Dlkp~NIll------~~~~~~kl~Dfg~~~~~ 663 (764)
.++|+|+.+.||++ +++..++++||..|...
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~n 281 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSYN 281 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEEE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhccCC
Confidence 46899999999999 45678999999998653
No 448
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=91.96 E-value=0.1 Score=34.36 Aligned_cols=26 Identities=12% Similarity=0.144 Sum_probs=10.7
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhhccC
Q 004268 448 IILAMVAFVFAILIFGILFVHRRKDK 473 (764)
Q Consensus 448 i~~~~v~~~~~~li~~~~~~~rrr~k 473 (764)
.+++.++++++++...+++++||+.+
T Consensus 15 gVVgGv~~v~ii~~~~~~~~RRRr~~ 40 (44)
T 2l2t_A 15 GVIGGLFILVIVGLTFAVYVRRKSIK 40 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCSS
T ss_pred eehHHHHHHHHHHHHHHHHhhhhhhh
Confidence 33333333334443444444444443
No 449
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=91.87 E-value=0.19 Score=33.23 Aligned_cols=29 Identities=17% Similarity=0.228 Sum_probs=12.5
Q ss_pred eehhhhHHHHHHHHHHHHHHHHHhhhccC
Q 004268 445 LVTIILAMVAFVFAILIFGILFVHRRKDK 473 (764)
Q Consensus 445 ~~~i~~~~v~~~~~~li~~~~~~~rrr~k 473 (764)
++..+++.+++++++++.++++++||+.+
T Consensus 13 IA~gVVgGv~~~~ii~~~~~~~~RRr~~~ 41 (44)
T 2ks1_B 13 IATGMVGALLLLLVVALGIGLFMRRRHIV 41 (44)
T ss_dssp STHHHHHHHHHHHHHHHHHHHHHHTTTCC
T ss_pred EEeehhHHHHHHHHHHHHHHHHhhhhHhh
Confidence 33444444444444444444444444443
No 450
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=88.67 E-value=0.39 Score=31.57 Aligned_cols=6 Identities=0% Similarity=0.512 Sum_probs=2.5
Q ss_pred ehhhhH
Q 004268 446 VTIILA 451 (764)
Q Consensus 446 ~~i~~~ 451 (764)
+.++++
T Consensus 15 a~~vVG 20 (44)
T 2jwa_A 15 ISAVVG 20 (44)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 334444
No 451
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=87.89 E-value=1.1 Score=41.71 Aligned_cols=118 Identities=6% Similarity=0.133 Sum_probs=82.0
Q ss_pred CCCceeeEeeEEeeCCEEEEEEEecCCC-CHHHHHhcCccccccCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCC
Q 004268 565 RHRNIVKLYGFCLHNKCMFLIYEYMERG-SLFCVLRNDVEAVELDWTKRVNIVKSMAHALSYLHYDCKPSIVHRDISSNN 643 (764)
Q Consensus 565 ~hpniv~~~~~~~~~~~~~lv~e~~~~~-~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iiH~Dlkp~N 643 (764)
.||+++.. .+-.+.+.+.+.++.-+.+ ++.. ++ ..+....++++.+|+....+++ .=+|--++|+|
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~-ik------~~~~~eKlr~l~ni~~l~~~~~-----~r~tf~L~P~N 109 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDN-IK------SFTKNEKLRYLLNIKNLEEVNR-----TRYTFVLAPDE 109 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGG-GG------GSCHHHHHHHHHHGGGGGGGGG-----SSEECCCSGGG
T ss_pred cCCcccce-EEEEcccEEEEEEEcCcccCCHHH-HH------hcCHHHHHHHHHHHHHHHHHhc-----CceEEEEecce
Confidence 57888866 5666667766666654422 3322 22 3677888999999998886666 44888999999
Q ss_pred eeecCCCCEEEeeeccccccCCCCCCceecccccccccccccccCCCCccchHH-HHHHHHHHHHhCCCCCCcccc
Q 004268 644 ILLNSNLEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYTMAVTEKCDVY-SFGVVALEVLMGSHPTDLLSS 718 (764)
Q Consensus 644 Ill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Diw-slG~il~~lltg~~Pf~~~~~ 718 (764)
++++.++.+++.=.|....+. |.- .+ ..|.| .+=+++..++++++.|+..-.
T Consensus 110 L~f~~~~~p~i~~RGik~~l~-----------------P~~-----~~-ee~fL~qyKAliiall~~K~~Fe~l~~ 162 (215)
T 4ann_A 110 LFFTRDGLPIAKTRGLQNVVD-----------------PLP-----VS-EAEFLTRYKALVICAFNEKQSFDALVE 162 (215)
T ss_dssp EEECTTSCEEESCCEETTTBS-----------------CCC-----CC-HHHHHHHHHHHHHHHHCTTCCHHHHHH
T ss_pred EEEcCCCCEEEEEccCccCCC-----------------CCC-----CC-HHHHHHHHHHHHHHHHcCCCCHHHHHc
Confidence 999999999998777643332 221 11 12444 577899999999999986544
No 452
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=86.31 E-value=2.8 Score=39.18 Aligned_cols=118 Identities=13% Similarity=0.121 Sum_probs=81.5
Q ss_pred CCCceeeEeeEEeeCCEEEEEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHHHHHHH-HHHhcCCCCcEEcCCCCCC
Q 004268 565 RHRNIVKLYGFCLHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSMAHALS-YLHYDCKPSIVHRDISSNN 643 (764)
Q Consensus 565 ~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~-~LH~~~~~~iiH~Dlkp~N 643 (764)
.||++ -..+-.+++.+.+.++.-+++.-...++ ..+....++++.+|+.... +++ .-+|--++|+|
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~------~~~~~eKlrll~nl~~L~~~~~~-----~r~tf~l~P~N 114 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIR------KTTLLSRIRAAIHLVSKVKHHSA-----RRLIFIVCPEN 114 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHH------TSCHHHHHHHHHHHHHHHSSCCS-----SSEECCCCGGG
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHH------hcCHHHHHHHHHHHHHHHHHhhh-----CceeEEEeCce
Confidence 57888 3444567777777777664443333333 3677888888888888766 555 56888999999
Q ss_pred eeecCCCCEEEeeeccccccCCCCCCceecccccccccccccccCCCCccchHH-HHHHHHHHHHhCCCCCCcccc
Q 004268 644 ILLNSNLEAFVADFGLARLLHPDSSNRTLVVGTYGYIAPELAYTMAVTEKCDVY-SFGVVALEVLMGSHPTDLLSS 718 (764)
Q Consensus 644 Ill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Diw-slG~il~~lltg~~Pf~~~~~ 718 (764)
++++.++.+++.=.|.-..+ +|.-.. ..|.| .+=+++..++.+++.|+..-.
T Consensus 115 L~f~~~~~p~i~hRGi~~~l-----------------pP~e~~------ee~fl~qyKali~all~~K~~Fe~l~~ 167 (219)
T 4ano_A 115 LMFNRALEPFFLHVGVKESL-----------------PPDEWD------DERLLREVKATVLALTEGEYRFDEYLK 167 (219)
T ss_dssp EEECTTCCEEESCCEETTTB-----------------SSCSCC------HHHHHHHHHHHHHHHTTCSSCHHHHHH
T ss_pred EEEeCCCcEEEEEcCCcccC-----------------CCCCCC------HHHHHHHHHHHHHHHHcCCCCHHHHHh
Confidence 99999999999877764332 222211 22444 577888999999999886554
No 453
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=85.23 E-value=1.9 Score=34.83 Aligned_cols=17 Identities=6% Similarity=0.003 Sum_probs=6.7
Q ss_pred cCCccCcCCCCCCEEEc
Q 004268 106 SIPLEFGNLKDLDQLRL 122 (764)
Q Consensus 106 ~~~~~~~~l~~L~~L~L 122 (764)
+...+|.++.+|+.+.|
T Consensus 11 I~~~aF~~c~~L~~i~i 27 (100)
T 2lz0_A 11 MDKSLFAGNTVIREITV 27 (100)
T ss_dssp SCSCTTTTCTTCCCEEE
T ss_pred ecHHHhcCCCCCcEEEc
Confidence 33333444444444433
No 454
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=81.80 E-value=3.1 Score=33.51 Aligned_cols=48 Identities=17% Similarity=0.185 Sum_probs=30.0
Q ss_pred CcCcccCCcccCCCCCCCEEecCCCcccccCCccCcCCCCCCEEEccCC
Q 004268 77 NRLTGTIPSEIGSLRDLLDLNLSNNILNGSIPLEFGNLKDLDQLRLQGN 125 (764)
Q Consensus 77 n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 125 (764)
..++.+...+|.++.+|+.+.+..+ ++.+...+|.++.+|+.+.+.+.
T Consensus 6 ~~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 6 EPVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp CCCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCS
T ss_pred CccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCC
Confidence 3455555566777777777776654 33466666777777777766554
No 455
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=79.00 E-value=1.2 Score=28.36 Aligned_cols=23 Identities=13% Similarity=0.129 Sum_probs=10.3
Q ss_pred ehhhhHHHHHHHHHHHHHHHHHh
Q 004268 446 VTIILAMVAFVFAILIFGILFVH 468 (764)
Q Consensus 446 ~~i~~~~v~~~~~~li~~~~~~~ 468 (764)
..+++++++.+.++..+++|+++
T Consensus 14 AGiVvG~v~gv~li~~l~~~~~r 36 (38)
T 2k1k_A 14 VAVIFGLLLGAALLLGILVFRSR 36 (38)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHC
T ss_pred eeeehHHHHHHHHHHHHHHHHee
Confidence 34444554444444444444433
No 456
>1afo_A Glycophorin A; integral membrane protein, transmembrane helix interactions, membrane protein folding; NMR {Homo sapiens} SCOP: j.35.1.1 PDB: 2kpf_A
Probab=70.15 E-value=4.7 Score=25.29 Aligned_cols=29 Identities=17% Similarity=0.206 Sum_probs=21.2
Q ss_pred eeehhhhHHHHHHHHHHHHHHHHHhhhcc
Q 004268 444 RLVTIILAMVAFVFAILIFGILFVHRRKD 472 (764)
Q Consensus 444 ~~~~i~~~~v~~~~~~li~~~~~~~rrr~ 472 (764)
.+..+++++.++++.++++..++.+|-++
T Consensus 11 ~i~lII~~vmaGiIG~IllI~y~I~rl~K 39 (40)
T 1afo_A 11 EITLIIFGVMAGVIGTILLISYGIRRLIK 39 (40)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 45677888888888887777777776543
No 457
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=66.67 E-value=0.63 Score=49.83 Aligned_cols=62 Identities=18% Similarity=0.130 Sum_probs=16.9
Q ss_pred cceeeeecCceeEEEEEECC-CCEEEE------EEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeEEe
Q 004268 512 IKYCIGTGGYGSVYRAQLSS-GKLVAL------KKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGFCL 577 (764)
Q Consensus 512 ~~~~ig~G~~g~V~~~~~~~-~~~vav------K~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~ 577 (764)
+.+.+| ||.||+|.+.. ..+||+ |........ .+....+.+|..+++.++|||+++.+++..
T Consensus 146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~-~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVS-EKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp STTTSS---BCCC---------CCBGGGC------------------------------------CBCCCEEE
T ss_pred ccccCC---chhhhcccccccCCchhhhhccCcccccccccc-ccccccccccccccccccccccCCCcceEE
Confidence 344555 99999998653 357888 665443322 223456788999999999999999988754
No 458
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=60.76 E-value=13 Score=24.50 Aligned_cols=10 Identities=40% Similarity=0.604 Sum_probs=5.1
Q ss_pred hhhhHHHHHH
Q 004268 447 TIILAMVAFV 456 (764)
Q Consensus 447 ~i~~~~v~~~ 456 (764)
.++.+++.++
T Consensus 13 ~Ia~~vVGvl 22 (44)
T 2jwa_A 13 SIISAVVGIL 22 (44)
T ss_dssp HHHHHHHHHH
T ss_pred chHHHHHHHH
Confidence 4555555533
No 459
>2l9u_A Receptor tyrosine-protein kinase ERBB-3; transmenbrane dimer, membrane protein, EGFR; NMR {Homo sapiens}
Probab=49.72 E-value=20 Score=21.71 Aligned_cols=23 Identities=22% Similarity=0.384 Sum_probs=12.7
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhc
Q 004268 449 ILAMVAFVFAILIFGILFVHRRK 471 (764)
Q Consensus 449 ~~~~v~~~~~~li~~~~~~~rrr 471 (764)
+++..++++.++.-.+.+++.||
T Consensus 12 ~i~gl~vif~~lg~tflywrgrr 34 (40)
T 2l9u_A 12 VIAGLVVIFMMLGGTFLYWRGRR 34 (40)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCceeEEEcccc
Confidence 34444555556665666666554
No 460
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=47.02 E-value=31 Score=22.71 Aligned_cols=31 Identities=19% Similarity=0.369 Sum_probs=24.8
Q ss_pred hhhhHHHHHHHHHHHHHHHHHhhhccCCCCC
Q 004268 447 TIILAMVAFVFAILIFGILFVHRRKDKKFNP 477 (764)
Q Consensus 447 ~i~~~~v~~~~~~li~~~~~~~rrr~k~~~~ 477 (764)
.|+.+++..++++++.+..++...|+++.+.
T Consensus 11 aIA~gVVgGv~~v~ii~~~~~~~~RRRr~~~ 41 (44)
T 2l2t_A 11 LIAAGVIGGLFILVIVGLTFAVYVRRKSIKK 41 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCSSC
T ss_pred eEEEeehHHHHHHHHHHHHHHHHhhhhhhhh
Confidence 4677777788888889988889999877654
No 461
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=46.25 E-value=25 Score=23.16 Aligned_cols=33 Identities=12% Similarity=0.208 Sum_probs=24.9
Q ss_pred eeehhhhHHHHHHHHHHHHHHHHHhhhccCCCC
Q 004268 444 RLVTIILAMVAFVFAILIFGILFVHRRKDKKFN 476 (764)
Q Consensus 444 ~~~~i~~~~v~~~~~~li~~~~~~~rrr~k~~~ 476 (764)
....|+.+++..++++++++..++...|+++.+
T Consensus 9 ~~~~IA~gVVgGv~~~~ii~~~~~~~~RRr~~~ 41 (44)
T 2ks1_B 9 KIPSIATGMVGALLLLLVVALGIGLFMRRRHIV 41 (44)
T ss_dssp CSSSSTHHHHHHHHHHHHHHHHHHHHHHTTTCC
T ss_pred CcceEEeehhHHHHHHHHHHHHHHHHhhhhHhh
Confidence 356677777777888888888888888887654
No 462
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=45.20 E-value=21 Score=24.66 Aligned_cols=7 Identities=0% Similarity=0.577 Sum_probs=2.6
Q ss_pred hhhHHHH
Q 004268 448 IILAMVA 454 (764)
Q Consensus 448 i~~~~v~ 454 (764)
+++++++
T Consensus 15 Ii~svl~ 21 (54)
T 2knc_A 15 VLVGVLG 21 (54)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 3333333
No 463
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=44.33 E-value=21 Score=24.63 Aligned_cols=8 Identities=38% Similarity=0.571 Sum_probs=3.2
Q ss_pred hhhhHHHH
Q 004268 447 TIILAMVA 454 (764)
Q Consensus 447 ~i~~~~v~ 454 (764)
++++++++
T Consensus 11 iIi~svl~ 18 (54)
T 2l8s_A 11 VILLSAFA 18 (54)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 33444443
No 464
>2jo1_A Phospholemman; FXYD1, Na,K-ATPase, micelle, hydrolase regulator; NMR {Homo sapiens}
Probab=41.15 E-value=26 Score=25.39 Aligned_cols=21 Identities=24% Similarity=0.444 Sum_probs=10.7
Q ss_pred eeehhhhHHHHHHHHHHHHHH
Q 004268 444 RLVTIILAMVAFVFAILIFGI 464 (764)
Q Consensus 444 ~~~~i~~~~v~~~~~~li~~~ 464 (764)
++..+++++|++++.++++.-
T Consensus 17 RiGGLifA~vLfi~GI~iilS 37 (72)
T 2jo1_A 17 QIGGLVIAGILFILGILIVLS 37 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred hccchHHHHHHHHHHHHHHHc
Confidence 344455566555555544443
No 465
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=39.68 E-value=29 Score=24.77 Aligned_cols=18 Identities=33% Similarity=0.467 Sum_probs=9.6
Q ss_pred hhhHHHHHHHHHHHHHHH
Q 004268 448 IILAMVAFVFAILIFGIL 465 (764)
Q Consensus 448 i~~~~v~~~~~~li~~~~ 465 (764)
+++++++.+++.+.+.++
T Consensus 12 ivlGg~~~lll~~glcI~ 29 (70)
T 2klu_A 12 IVLGGVAGLLLFIGLGIF 29 (70)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHH
Confidence 455555555555555555
No 466
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=39.21 E-value=1.9e+02 Score=31.58 Aligned_cols=84 Identities=19% Similarity=0.219 Sum_probs=49.0
Q ss_pred eeEeeEEeeCCEEEEEEEecCCCCHHHHHhc----------Ccccc----ccCHHHHHHHHHHHHH--HHHHHHhcCCCC
Q 004268 570 VKLYGFCLHNKCMFLIYEYMERGSLFCVLRN----------DVEAV----ELDWTKRVNIVKSMAH--ALSYLHYDCKPS 633 (764)
Q Consensus 570 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~----------~~~~~----~l~~~~~~~i~~qi~~--aL~~LH~~~~~~ 633 (764)
++.|.+........+ .|++++.++.+.+.. ..... ...+.....++..+|. .+.|+= |
T Consensus 402 i~~Y~Vipls~~~Gl-IE~V~~~tl~~il~~~~~l~~~f~~~~~~~~~~~~~~~~a~~nF~~S~A~ySvv~YIL-----G 475 (614)
T 3ls8_A 402 LTPYKVLATSTKHGF-MQFIQSVPVAEVLDTEGSIQNFFRKYAPSENGPNGISAEVMDTYVKSCAGYCVITYIL-----G 475 (614)
T ss_dssp CCCCCEEESSSSEEE-EECCCCEEHHHHHHHTSSHHHHHHHHSBCTTSGGGBCHHHHHHHHHHHHHHHHHHHHH-----T
T ss_pred eeccEEEEecCCCce-EEEeCCccHHHHHHccChHHHHHHHhCCCccccccccHHHHHHHHHHHHHHhHhheee-----e
Confidence 344555544444333 467766555554432 11111 1123444455555443 455555 3
Q ss_pred cEEcCCCCCCeeecCCCCEEEeeecccc
Q 004268 634 IVHRDISSNNILLNSNLEAFVADFGLAR 661 (764)
Q Consensus 634 iiH~Dlkp~NIll~~~~~~kl~Dfg~~~ 661 (764)
| +|=+++|||++.+|++.=+|||.+-
T Consensus 476 i--gDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 476 V--GDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp C--CCCCTTSEEECTTSCEEECCCSSCT
T ss_pred c--cCCCCcceeEcCCCCEeeeehHHhh
Confidence 3 5889999999999999999999884
No 467
>2k1a_A Integrin alpha-IIB; single-PASS transmembrane segment, alternative splicing, calcium, cell adhesion, cleavage on PAIR of basic residues; NMR {Homo sapiens} PDB: 2k9j_A
Probab=33.90 E-value=45 Score=21.67 Aligned_cols=12 Identities=0% Similarity=0.152 Sum_probs=5.1
Q ss_pred eehhhhHHHHHH
Q 004268 445 LVTIILAMVAFV 456 (764)
Q Consensus 445 ~~~i~~~~v~~~ 456 (764)
++++++++++++
T Consensus 10 ~wiIi~s~l~GL 21 (42)
T 2k1a_A 10 IWWVLVGVLGGL 21 (42)
T ss_dssp HHHHHHHHHHHH
T ss_pred hHHHHHHHHHHH
Confidence 344444444433
No 468
>1pi7_A VPU protein, U ORF protein; alpha helix, viral protein; NMR {Human immunodeficiency virus 1} SCOP: j.35.1.1 PDB: 1pi8_A 1pje_A 2gof_A 2goh_A 2jpx_A
Probab=32.33 E-value=48 Score=20.71 Aligned_cols=22 Identities=27% Similarity=0.634 Sum_probs=10.8
Q ss_pred hhhHHHHHHHHHHHHHHHHHhh
Q 004268 448 IILAMVAFVFAILIFGILFVHR 469 (764)
Q Consensus 448 i~~~~v~~~~~~li~~~~~~~r 469 (764)
++..+++++++++++.+.+...
T Consensus 8 ivalivalIiaIVVWtiv~ieY 29 (36)
T 1pi7_A 8 IVALVVAIIIAIVVWSIVIIEG 29 (36)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3334444555555555555433
No 469
>2jp3_A FXYD domain-containing ION transport regulator 4; protein, transcription; NMR {Rattus norvegicus}
Probab=27.56 E-value=28 Score=24.96 Aligned_cols=20 Identities=15% Similarity=0.117 Sum_probs=9.8
Q ss_pred eeehhhhHHHHHHHHHHHHH
Q 004268 444 RLVTIILAMVAFVFAILIFG 463 (764)
Q Consensus 444 ~~~~i~~~~v~~~~~~li~~ 463 (764)
++...++++|++++.++++.
T Consensus 18 RigGLifA~vLfi~GI~iil 37 (67)
T 2jp3_A 18 QLGGLIFGGLLCIAGIALAL 37 (67)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred eecchhhHHHHHHHHHHHHH
Confidence 34445555555555444443
No 470
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=24.33 E-value=1.7e+02 Score=29.10 Aligned_cols=140 Identities=14% Similarity=0.092 Sum_probs=72.4
Q ss_pred CCcceeeeecCceeEEEEEECCCCEEEEEEccCCCCCcHHHHHHHHHHHHHHHhcCCCceeeEeeE--------------
Q 004268 510 FHIKYCIGTGGYGSVYRAQLSSGKLVALKKLHRSETEEPAFLESFQTEARLLSQIRHRNIVKLYGF-------------- 575 (764)
Q Consensus 510 y~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~-------------- 575 (764)
+..++....|.. -||.+.. ++..|+||-.. .-..+.+..++...-.+.-|...-+...
T Consensus 71 v~~I~~s~~Gst-gvff~~t-d~~~~VVK~s~------~l~~E~l~s~LA~~LGlpiP~~Riv~~~~~E~~e~~~~L~~~ 142 (342)
T 1cja_A 71 FKGIERSEKGTE-GLFFVET-ESGVFIVKRST------NIESETFCSLLCMRLGLHAPKVRVVSSNSEEGTNMLECLAAI 142 (342)
T ss_dssp EEEEEECCSTTS-CEEEEEE-SSCEEEEECCT------THHHHHHHHHHHHHHTCCCCCEEEEESSSHHHHHHHHHHHHH
T ss_pred eeEEEeccCCCC-CeEEEEe-CCCEEEEeCcH------HHHHHHHHHHHHHHhCCCCCCeeEEeeCcHHHHHHHHHHHHh
Confidence 444555555654 5665555 47889999431 1123455555555555566654322211
Q ss_pred E--------eeCCEEEEEEEecCCCCHHHHHhcCccccccCHHHHHHHHHHH--HHHHHHHHhcCCCC-cE-EcCCCCCC
Q 004268 576 C--------LHNKCMFLIYEYMERGSLFCVLRNDVEAVELDWTKRVNIVKSM--AHALSYLHYDCKPS-IV-HRDISSNN 643 (764)
Q Consensus 576 ~--------~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~l~~~~~~~i~~qi--~~aL~~LH~~~~~~-ii-H~Dlkp~N 643 (764)
. ...+..+++|+|.+|..|.+.-... ....+... .+.++ +-+++.+....++- .+ +.-=.+.|
T Consensus 143 ~~~~~~l~~l~~~~~~l~meyv~G~~L~e~~~~~-~~~~f~~~----~~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~N 217 (342)
T 1cja_A 143 DKSFRVITTLANQANILLMELVRGITLNKLTTTS-APEVLTKS----TMQQLGSLMALDVIVNNSDRLPIAWTNEGNLDN 217 (342)
T ss_dssp CSSSCHHHHHTTCSEEEEEECCCEEESTTCCSSS-HHHHSCHH----HHHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGG
T ss_pred hhhhHHHHHhhcccceehhhhcCCCccccchhhh-hhhhcCHH----HHHhhchhheehhhhcCCccCcccccCCCChhh
Confidence 0 0122467999999876654332110 00112222 23333 23344444332332 11 12357899
Q ss_pred eeecCCCC-EEEeeeccccc
Q 004268 644 ILLNSNLE-AFVADFGLARL 662 (764)
Q Consensus 644 Ill~~~~~-~kl~Dfg~~~~ 662 (764)
||+++++. +.++|-+.+..
T Consensus 218 IL~~~~n~~~~~IDhn~af~ 237 (342)
T 1cja_A 218 IMLSERGATVVPIDSKIIPL 237 (342)
T ss_dssp EEEESBTTCEEECSCCCCCC
T ss_pred eEEeCCCCeEEEEcCCcccc
Confidence 99986554 88999998854
No 471
>2lx0_A Membrane fusion protein P14; membrane fusion protein transmembrane domain, P14 fast prote ARCH, micelle-peptide complex, membrane protein; NMR {Synthetic}
Probab=23.36 E-value=1.1e+02 Score=17.36 Aligned_cols=22 Identities=27% Similarity=0.581 Sum_probs=9.3
Q ss_pred hhhhHHHHHHHHHHHHHHHHHhh
Q 004268 447 TIILAMVAFVFAILIFGILFVHR 469 (764)
Q Consensus 447 ~i~~~~v~~~~~~li~~~~~~~r 469 (764)
.++.++|+++ ..+.+++|.++.
T Consensus 7 eviaglvall-tflafgfwlfky 28 (32)
T 2lx0_A 7 EVIAGLVALL-TFLAFGFWLFKY 28 (32)
T ss_dssp HHHHHHHHHH-HHHHHHHHHHHH
T ss_pred HHHHHHHHHH-HHHHHHHHHHHH
Confidence 3444444433 333444454443
No 472
>1zza_A Stannin, AG8_1; helix, membrane protein; NMR {Homo sapiens}
Probab=20.07 E-value=1.4e+02 Score=21.62 Aligned_cols=14 Identities=29% Similarity=0.351 Sum_probs=6.6
Q ss_pred HHHHHHHHHHhhhc
Q 004268 458 AILIFGILFVHRRK 471 (764)
Q Consensus 458 ~~li~~~~~~~rrr 471 (764)
.++++.+|++.|-+
T Consensus 28 g~li~gcwcylrlq 41 (90)
T 1zza_A 28 GALILGCWCYLRLQ 41 (90)
T ss_dssp HHHHHHHHTTTSSC
T ss_pred HHHHHHHHHHHHHH
Confidence 34455555554433
Done!