BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 004269
(764 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SGQ6|PP126_ARATH Pentatricopeptide repeat-containing protein At1g76280
OS=Arabidopsis thaliana GN=At1g76280 PE=2 SV=2
Length = 773
Score = 790 bits (2039), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/756 (54%), Positives = 535/756 (70%), Gaps = 82/756 (10%)
Query: 37 SRTLTTTMGLNE----ESISKATQMQIVDALCRGERSRASHLLLNLGHAHHSLGADDFFH 92
SR++TT +G NE + SK Q+QIVDAL GER AS LL L ++SL ADDF
Sbjct: 43 SRSVTTMIG-NEFIRCQDESKILQLQIVDALRSGERQGASALLFKLIQGNYSLSADDFHD 101
Query: 93 ILNYCARSPDPLFVMETWRMMEEKEIGLNNKCYLLMMQALCKGGYLEEASNLIYFLGERY 152
IL YCARSPDP+FVMET+ +M +KEI L+++ L ++++LC GG+L++AS I+ + E
Sbjct: 102 ILYYCARSPDPVFVMETYSVMCKKEISLDSRSLLFIVKSLCNGGHLDKASEFIHAVREDD 161
Query: 153 GIYPILPVYNSFLGACAKLHSMVHANLCLDLMDSRMVGKNEVTYTELLKLAVWQKNLSAV 212
I P+LP+YN FLGACA+ S+ HA+ CL+LMD R VGKN +TY LLKLAV+Q+NLS V
Sbjct: 162 RISPLLPIYNFFLGACARTRSVYHASKCLELMDQRRVGKNGITYVALLKLAVFQRNLSTV 221
Query: 213 HEIWEDYIKHYSLSIFSLRKFVWSFTRLRDLKSAYETLQHMVALAMMGKLYINRTSEGRL 272
++IW+ Y+ HY+L I SLR+F+WSFTRL DLKSAYE LQHMV LA+ G+ ++ +++ G+L
Sbjct: 222 NDIWKHYVNHYNLDILSLRRFIWSFTRLGDLKSAYELLQHMVYLALRGEFFV-KSNRGKL 280
Query: 273 RSSRLDIPIPLN-------------------------ALP-------VMKVLRWSFSDVI 300
S+RL IP+P ALP ++VLRWSF+DVI
Sbjct: 281 HSTRLYIPVPSKDETGSEKFAFGVTDRIVDCNSSSKVALPKGHNKILAIRVLRWSFNDVI 340
Query: 301 HACGRTQNSGLAEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRGLRNGMEVLKIMQQNNLK 360
HACG+++NS LAEQLMLQ LK+MQQ NLK
Sbjct: 341 HACGQSKNSELAEQLMLQ--------------------------------LKVMQQQNLK 368
Query: 361 PQDSTIATLSVECSKALELDLAEALLDQISRCTNPKPFSAFLAACDTMDKPERAIKIFAK 420
P DST+AT++ CSKAL++DLAE LLDQIS C+ PF+ LAA D++D+PERA+++ A+
Sbjct: 369 PYDSTLATVAAYCSKALQVDLAEHLLDQISECSYSYPFNNLLAAYDSLDQPERAVRVLAR 428
Query: 421 MRQ-KLRPDIRTYELLFSLFGNVNAPYEEGNMFSQVDSAKRINAIEMDMARNNIQHSHIS 479
M++ KLRPD+RTYELLFSLFGNVNAPYEEGNM SQVD KRINAIEMDM RN QHS IS
Sbjct: 429 MKELKLRPDMRTYELLFSLFGNVNAPYEEGNMLSQVDCCKRINAIEMDMMRNGFQHSPIS 488
Query: 480 MKNLLKALGAEGMIRELIQYF-------CDSKTPLGTPTYNTVLHSLVEAQESHRAMEIF 532
N+L+ALGAEGM+ E+I++ S LGTPTYN VLHSL+EA E+ + IF
Sbjct: 489 RLNVLRALGAEGMVNEMIRHLQKAENLSAHSNMYLGTPTYNIVLHSLLEANETDMVINIF 548
Query: 533 KQMKTCGIPPNAATYNIMIDCCSIIRCFKSASALVSMMVRDGFYPQTMTYTALIKILLDY 592
K+MK+CG P + ATYNIMIDCCS+I +KSA ALVSMM+RDGF P+ +T+TAL+KILL+
Sbjct: 549 KRMKSCGCPADVATYNIMIDCCSLIHSYKSACALVSMMIRDGFSPKAVTFTALMKILLND 608
Query: 593 GDFDEALNLLDLVSLEGIPHDVLLYNTILKKACEKGRIDVIEFIIEQMHQNKVQPDPSTC 652
+F+EALNLLD +LE I DVL YNTIL+KA EKG IDVIE+I+EQMH+ KV PDP+TC
Sbjct: 609 ANFEEALNLLDQAALEEIHLDVLSYNTILRKAFEKGMIDVIEYIVEQMHREKVNPDPTTC 668
Query: 653 HFVFSGYVNCGFHNSAMEALQVLSMRMLCEE-VSTLEEKRSDFED-LILAEDSEAESRIL 710
H+VFS YV G+H +A+EAL VLS+RML EE +L++K+ + E+ +++ED EAE++I+
Sbjct: 669 HYVFSCYVEKGYHATAIEALNVLSLRMLNEEDKESLQDKKIELEENFVMSEDPEAETKII 728
Query: 711 QFCEDSNENLAFTAALLQLRWCTIVGFPISWSLDRA 746
+ S E+LA AALL LRWC ++G I WS D++
Sbjct: 729 ELFRKSEEHLA--AALLNLRWCAMLGGRIIWSEDQS 762
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 110 bits (276), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/366 (24%), Positives = 170/366 (46%), Gaps = 21/366 (5%)
Query: 295 SFSDVIHACGRTQNSGLAEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRGLRNGMEVLKIM 354
++ V++ + ++ LA L+ +M+ L+P Y+ I + + + + + + K M
Sbjct: 223 TYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEM 282
Query: 355 QQNNLKPQDSTIATL-SVECSKALELDLAEALLDQISRCTNPK--PFSAFLAACDTMDKP 411
+ ++P T ++L S C+ D + L D I R NP FSA + A K
Sbjct: 283 ETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKL 342
Query: 412 ERAIKIFAKM-RQKLRPDIRTYELLFSLFGNVNAPYEEGNMFSQVDSAKRINAIEMDMAR 470
A K++ +M ++ + P I TY L + F M ++D AK++ M
Sbjct: 343 VEAEKLYDEMVKRSIDPSIVTYSSLINGFC----------MHDRLDEAKQMFEF---MVS 389
Query: 471 NNIQHSHISMKNLLKALGAEGMIRELIQYFCD-SKTPL--GTPTYNTVLHSLVEAQESHR 527
+ ++ L+K + E ++ F + S+ L T TYN ++ L +A +
Sbjct: 390 KHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDM 449
Query: 528 AMEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASALVSMMVRDGFYPQTMTYTALIK 587
A EIFK+M + G+PPN TYN ++D + A + + R P TY +I+
Sbjct: 450 AQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIE 509
Query: 588 ILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILKKACEKGRIDVIEFIIEQMHQNKVQP 647
+ G ++ +L +SL+G+ DV+ YNT++ C KG + + + ++M ++ P
Sbjct: 510 GMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLP 569
Query: 648 DPSTCH 653
+ S C+
Sbjct: 570 N-SGCY 574
Score = 89.0 bits (219), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 94/396 (23%), Positives = 158/396 (39%), Gaps = 51/396 (12%)
Query: 296 FSDVIHACGRTQNSGLAEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRGLRNGMEVLKIMQ 355
FS ++ A + + L QMQ+LG+ + +TY I L + VL M
Sbjct: 84 FSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMM 143
Query: 356 QNNLKPQDSTIATLSVECSKALELDLAEALLDQI---SRCTNPKPFSAFLAACDTMDKPE 412
+ +P T+++L + + A AL+DQ+ N F+ + +K
Sbjct: 144 KLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKAS 203
Query: 413 RAIKIFAKMRQK-LRPDIRTYELLFSLFGNVNAPYEEGNMFSQVDSAKRINAIEMDMARN 471
A+ + +M K +PD+ TY ++ VN + G + D+A N
Sbjct: 204 EAMALIDRMVAKGCQPDLVTYGVV------VNGLCKRG---------------DTDLAFN 242
Query: 472 NIQHSHISMKNLLKALGAEGMIRELIQYFCDSKTPLGTPTYNTVLHSLVEAQESHRAMEI 531
L+ K G YNT++ L + + A+ +
Sbjct: 243 ------------------------LLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNL 278
Query: 532 FKQMKTCGIPPNAATYNIMIDC-CSIIRCFKSASALVSMMVRDGFYPQTMTYTALIKILL 590
FK+M+T GI PN TY+ +I C C+ R + AS L+S M+ P T++ALI +
Sbjct: 279 FKEMETKGIRPNVVTYSSLISCLCNYGR-WSDASRLLSDMIERKINPDVFTFSALIDAFV 337
Query: 591 DYGDFDEALNLLDLVSLEGIPHDVLLYNTILKKACEKGRIDVIEFIIEQMHQNKVQPDPS 650
G EA L D + I ++ Y++++ C R+D + + E M PD
Sbjct: 338 KEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVV 397
Query: 651 TCHFVFSGYVNCGFHNSAMEALQVLSMRMLCEEVST 686
T + + G+ ME + +S R L T
Sbjct: 398 TYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVT 433
Score = 86.3 bits (212), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 86/400 (21%), Positives = 166/400 (41%), Gaps = 25/400 (6%)
Query: 276 RLDIPIPLNALPVMKVLRW-----SFSDVIHACGRTQNSGLAEQLMLQMQSLGLQPSSHT 330
R +P+ L L M L + + S +++ ++ A L+ QM G QP++ T
Sbjct: 129 RSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVT 188
Query: 331 YDGFIRAIVSDRGLRNGMEVLKIMQQNNLKPQDSTIATLSVECSKALELDLAEALLDQIS 390
++ I + M ++ M +P T + K + DLA LL+++
Sbjct: 189 FNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKME 248
Query: 391 RCTNPKPFSAFLAACDTMDKPER---AIKIFAKMRQK-LRPDIRTYELLFSLFGNVNAPY 446
+ + D + K + A+ +F +M K +RP++ TY L S N
Sbjct: 249 QGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCN----- 303
Query: 447 EEGNMFSQVDSAKRINAIEMDMARNNIQHSHISMKNLLKALGAEGMIRELIQYFCDSKTP 506
+ + A R+ + DM I + L+ A EG + E + + +
Sbjct: 304 -----YGRWSDASRLLS---DMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKR 355
Query: 507 LGTP---TYNTVLHSLVEAQESHRAMEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSA 563
P TY+++++ A ++F+ M + P+ TYN +I + +
Sbjct: 356 SIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEG 415
Query: 564 SALVSMMVRDGFYPQTMTYTALIKILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILKK 623
+ M + G T+TY LI+ L GD D A + + +G+P +++ YNT+L
Sbjct: 416 MEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDG 475
Query: 624 ACEKGRIDVIEFIIEQMHQNKVQPDPSTCHFVFSGYVNCG 663
C+ G+++ + E + ++K++P T + + G G
Sbjct: 476 LCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAG 515
Score = 64.3 bits (155), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 87/433 (20%), Positives = 172/433 (39%), Gaps = 47/433 (10%)
Query: 125 YLLMMQALCKGGYLEEASNLIYFLGERYGIYPILPVYNSFLGACAKLHSMVHANLCLDLM 184
Y +++ LCK G + A NL+ + E+ + P + +YN+ + K M A M
Sbjct: 224 YGVVVNGLCKRGDTDLAFNLLNKM-EQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEM 282
Query: 185 DSRMVGKNEVTYTELLKLAVWQKNLSAVHEIWEDYI-KHYSLSIFSLRKFVWSFTRLRDL 243
+++ + N VTY+ L+ S + D I + + +F+ + +F + L
Sbjct: 283 ETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKL 342
Query: 244 KSAYETLQHMVALAMMGKLYINRTSEGRLRSSRLDIPIPLNALPVMKVLRWSFSDVIHAC 303
A + MV RS +D I ++S +I+
Sbjct: 343 VEAEKLYDEMVK-----------------RS--IDPSI------------VTYSSLINGF 371
Query: 304 GRTQNSGLAEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRGLRNGMEVLKIMQQNNLKPQD 363
A+Q+ M S P TY+ I+ + + GMEV + M Q L
Sbjct: 372 CMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNT 431
Query: 364 STIATLSVECSKALELDLAEALLDQISRCTNPKPFSAFLAACDTM---DKPERAIKIFAK 420
T L +A + D+A+ + ++ P + D + K E+A+ +F
Sbjct: 432 VTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEY 491
Query: 421 M-RQKLRPDIRTYELLFSLFGNVNAPYEEGNMFSQVDSAKRINAIEMDMARNNIQHSHIS 479
+ R K+ P I TY ++ + ++F + + ++ D+ N S
Sbjct: 492 LQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLS----LKGVKPDVVAYNTMISGFC 547
Query: 480 MKNLLKALGAEGMIRELIQYFCDSKTPLGTPTYNTVLHSLVEAQESHRAMEIFKQMKTCG 539
K + A+ + +E+ + D P + YNT++ + + + + E+ K+M++CG
Sbjct: 548 RKGSKEE--ADALFKEMKE---DGTLP-NSGCYNTLIRARLRDGDREASAELIKEMRSCG 601
Query: 540 IPPNAATYNIMID 552
+A+T ++ +
Sbjct: 602 FAGDASTIGLVTN 614
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/292 (18%), Positives = 120/292 (41%), Gaps = 25/292 (8%)
Query: 93 ILNYCARSPDPLFVMETWRMMEEKEIGLNNKCYLLMMQALCKGGYLEEASNLIYFLGERY 152
++N + D ME+ ++ Y ++ LCK ++++A NL + E
Sbjct: 227 VVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEM-ETK 285
Query: 153 GIYPILPVYNSFLGACAKLHSMVHANLCLDLMDSRMVGKNEVTYTELLKLAVWQKNLSAV 212
GI P + Y+S + A+ L M R + + T++ L+ V + L
Sbjct: 286 GIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEA 345
Query: 213 HEIWEDYIKH-YSLSIFSLRKFVWSFTRLRDLKSAYETLQHMVALAMMGKLYI-NRTSEG 270
+++++ +K SI + + F L A + + MV+ + N +G
Sbjct: 346 EKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKG 405
Query: 271 RLRSSRLDIPIPLNALPVMKVLR-----------WSFSDVIHACGRTQNSGLAEQLMLQM 319
+ R++ M+V R +++ +I + + +A+++ +M
Sbjct: 406 FCKYKRVE--------EGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEM 457
Query: 320 QSLGLQPSSHTYDGFIRAIVSDRGLRNGMEVLKIMQQNNLKPQDSTIATLSV 371
S G+ P+ TY+ + + + L M V + +Q++ ++P TI T ++
Sbjct: 458 VSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP---TIYTYNI 506
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 70/367 (19%), Positives = 147/367 (40%), Gaps = 18/367 (4%)
Query: 10 FQLIADSFCKSKFHKHERRNVANKLELSRTLTTTMGLNEESISKATQMQIVDALCR-GER 68
+ I D CK K H + N+ ++E T G+ ++ ++ ++ LC G
Sbjct: 259 YNTIIDGLCKYK-HMDDALNLFKEME-------TKGIRPNVVTYSS---LISCLCNYGRW 307
Query: 69 SRASHLLLNLGHAHHSLGADDFFHILNYCARSPDPLFVMETWRMMEEKEIGLNNKCYLLM 128
S AS LL ++ + F +++ + + + + M ++ I + Y +
Sbjct: 308 SDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSL 367
Query: 129 MQALCKGGYLEEASNLIYFLGERYGIYPILPVYNSFLGACAKLHSMVHANLCLDLMDSRM 188
+ C L+EA + F+ ++ +P + YN+ + K + M R
Sbjct: 368 INGFCMHDRLDEAKQMFEFMVSKH-CFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRG 426
Query: 189 VGKNEVTYTELLKLAVWQKNLSAVHEIWEDYIKH-YSLSIFSLRKFVWSFTRLRDLKSAY 247
+ N VTY L++ + EI+++ + +I + + + L+ A
Sbjct: 427 LVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAM 486
Query: 248 ETLQHMVALAMMGKLYI-NRTSEGRLRSSRLDIPIPLN---ALPVMKVLRWSFSDVIHAC 303
+++ M +Y N EG ++ +++ L +L +K +++ +I
Sbjct: 487 VVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGF 546
Query: 304 GRTQNSGLAEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRGLRNGMEVLKIMQQNNLKPQD 363
R + A+ L +M+ G P+S Y+ IRA + D E++K M+
Sbjct: 547 CRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDA 606
Query: 364 STIATLS 370
STI ++
Sbjct: 607 STIGLVT 613
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 109 bits (273), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 120/546 (21%), Positives = 232/546 (42%), Gaps = 27/546 (4%)
Query: 155 YPILPVYNSFLGACAKLHSMVHANLCLDLMDSRMVGKNEVTYTELLKLAVWQKNLSAVHE 214
+P + ++ L A AK++ + M + + N TY+ L+ + LS
Sbjct: 78 FPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALA 137
Query: 215 IWEDYIK-HYSLSIFSLRKFVWSFTRLRDLKSAYETLQHMVALAMMGKLY-INRTSEGRL 272
+ +K Y I +L + F + A + MV + + N G
Sbjct: 138 VLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLF 197
Query: 273 RSSRLDIPIPLNALPVMKVLR---WSFSDVIHACGRTQNSGLAEQLMLQMQSLGLQPSSH 329
R +R + L V+K + ++ V++ + + LA L+ +M+ ++P
Sbjct: 198 RHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVV 257
Query: 330 TYDGFIRAIVSDRGLRNGMEVLKIMQQNNLKPQDSTIATL-SVECSKALELDLAEALLDQ 388
Y+ I A+ + + + + + + M ++P T +L C+ D + L D
Sbjct: 258 IYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM 317
Query: 389 ISRCTNPK--PFSAFLAACDTMDKPERAIKIFAKM-RQKLRPDIRTYELLFSLFGNVNAP 445
I R NP FSA + A K A K++ +M ++ + PDI TY L + F
Sbjct: 318 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC----- 372
Query: 446 YEEGNMFSQVDSAKRINAIEMDMARN---NIQHSHISMKNLLKALGA-EGMIRELIQYFC 501
M ++D AK + E+ ++++ N+ + +K KA EGM EL +
Sbjct: 373 -----MHDRLDEAKHM--FELMISKDCFPNVVTYNTLIKGFCKAKRVDEGM--ELFREMS 423
Query: 502 DSKTPLGTPTYNTVLHSLVEAQESHRAMEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFK 561
T TY T++H +A+E A +FKQM + G+ P+ TY+I++D +
Sbjct: 424 QRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVE 483
Query: 562 SASALVSMMVRDGFYPQTMTYTALIKILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTIL 621
+A + + R P TY +I+ + G ++ +L +SL+G+ +V+ Y T++
Sbjct: 484 TALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMM 543
Query: 622 KKACEKGRIDVIEFIIEQMHQNKVQPDPSTCHFVFSGYVNCGFHNSAMEALQVLSMRMLC 681
C KG + + + +M + PD T + + ++ G ++ E ++ +
Sbjct: 544 SGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFV 603
Query: 682 EEVSTL 687
+ ST+
Sbjct: 604 GDASTI 609
Score = 84.7 bits (208), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 87/405 (21%), Positives = 164/405 (40%), Gaps = 22/405 (5%)
Query: 312 AEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRGLRNGMEVLKIMQQNNLKPQDSTIATLSV 371
A L+ QM +G QP S T++ I + + ++ M +P T +
Sbjct: 170 AVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVN 229
Query: 372 ECSKALELDLAEALLDQISRCTNPKP----FSAFLAACDTMDKPERAIKIFAKMRQK-LR 426
K ++DLA +LL ++ + +P ++ + A A+ +F +M K +R
Sbjct: 230 GLCKRGDIDLALSLLKKMEQ-GKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIR 288
Query: 427 PDIRTYELLFSLFGNVNAPYEEGNMFSQVDSAKRINAIEMDMARNNIQHSHISMKNLLKA 486
P++ TY L N + + A R+ + DM I + ++ L+ A
Sbjct: 289 PNVVTYNSLIRCLCN----------YGRWSDASRLLS---DMIERKINPNVVTFSALIDA 335
Query: 487 LGAEGMIRELIQYFCDSKTPLGTP---TYNTVLHSLVEAQESHRAMEIFKQMKTCGIPPN 543
EG + E + + + P TY+++++ A +F+ M + PN
Sbjct: 336 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 395
Query: 544 AATYNIMIDCCSIIRCFKSASALVSMMVRDGFYPQTMTYTALIKILLDYGDFDEALNLLD 603
TYN +I + L M + G T+TYT LI + D A +
Sbjct: 396 VVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFK 455
Query: 604 LVSLEGIPHDVLLYNTILKKACEKGRIDVIEFIIEQMHQNKVQPDPSTCHFVFSGYVNCG 663
+ +G+ D++ Y+ +L C G+++ + E + ++K++PD T + + G G
Sbjct: 456 QMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAG 515
Query: 664 FHNSAMEALQVLSMRMLCEEVSTLEEKRSDFEDLILAEDSEAESR 708
+ LS++ + V T S F L E+++A R
Sbjct: 516 KVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFR 560
Score = 63.9 bits (154), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 102/509 (20%), Positives = 205/509 (40%), Gaps = 56/509 (11%)
Query: 54 ATQMQIVDALCRGER-SRASHL---LLNLGHAHHSLGADDFFHILNYCARSPDPLFVMET 109
T +++ C G R S A L ++ +G+ S + H L R+ + + +++
Sbjct: 152 VTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDR 211
Query: 110 WRMMEEKEIGLNNKCYLLMMQALCKGGYLEEASNLIYFLGERYGIYPILPVYNSFLGACA 169
M K + Y +++ LCK G ++ A +L+ + E+ I P + +YN+ + A
Sbjct: 212 ---MVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKM-EQGKIEPGVVIYNTIIDALC 267
Query: 170 KLHSMVHANLCLDLMDSRMVGKNEVTYTELLKLAVWQKNLSAVHEIWEDYI-KHYSLSIF 228
++ A MD++ + N VTY L++ S + D I + + ++
Sbjct: 268 NYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVV 327
Query: 229 SLRKFVWSFTRLRDLKSAYETLQHMVALAMMGKLYINRTSEGRLRSSRLDIPIPLNALPV 288
+ + +F + L A + M+ RS DI
Sbjct: 328 TFSALIDAFVKEGKLVEAEKLYDEMIK-----------------RSIDPDI--------- 361
Query: 289 MKVLRWSFSDVIHACGRTQNSGLAEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRGLRNGM 348
+++S +I+ A+ + M S P+ TY+ I+ + + GM
Sbjct: 362 -----FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGM 416
Query: 349 EVLKIMQQNNLKPQDSTIATLSVECSKALELDLAEALLDQ-ISRCTNPK--PFSAFLAAC 405
E+ + M Q L T TL +A E D A+ + Q +S P +S L
Sbjct: 417 ELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGL 476
Query: 406 DTMDKPERAIKIFAKM-RQKLRPDIRTYELLFSLFGNVNAPYEEGNMFSQVDSAKRINAI 464
K E A+ +F + R K+ PDI TY ++ + ++F + + +
Sbjct: 477 CNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLS----LKGV 532
Query: 465 EMDMARNNIQHSHISMKNLLKALGAEGMIRELIQYFCDSKTPL-GTPTYNTVLHSLVEAQ 523
+ ++ S K L + A+ + RE+ + + PL + TYNT++ + +
Sbjct: 533 KPNVVTYTTMMSGFCRKGLKEE--ADALFREMKE-----EGPLPDSGTYNTLIRAHLRDG 585
Query: 524 ESHRAMEIFKQMKTCGIPPNAATYNIMID 552
+ + E+ ++M++C +A+T ++ +
Sbjct: 586 DKAASAELIREMRSCRFVGDASTIGLVTN 614
Score = 35.4 bits (80), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/97 (19%), Positives = 48/97 (49%)
Query: 563 ASALVSMMVRDGFYPQTMTYTALIKILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILK 622
A L MV+ +P + ++ L+ + FD ++L + + GI H++ Y+ ++
Sbjct: 65 AVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILIN 124
Query: 623 KACEKGRIDVIEFIIEQMHQNKVQPDPSTCHFVFSGY 659
C + ++ + ++ +M + +PD T + + +G+
Sbjct: 125 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGF 161
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 106 bits (264), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 122/554 (22%), Positives = 234/554 (42%), Gaps = 43/554 (7%)
Query: 155 YPILPVYNSFLGACAKLHSMVHANLCLDLMDSRMVGKNEVTYTELLKLAVWQKNLSAVHE 214
+P + +N L A AK++ + M + + + TY+ + + LS
Sbjct: 80 FPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALA 139
Query: 215 IWEDYIK-HYSLSIFSLRKFVWSFTRLRDLKSAYETLQHMVALA-----------MMGKL 262
+ +K Y I +L + + + + A + MV + + G
Sbjct: 140 VLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLF 199
Query: 263 YINRTSEGRLRSSRLDIPIPLNALPVMKVLRWSFSDVIHACGRTQNSGLAEQLMLQMQSL 322
N+ SE + +D + P + ++ V++ + + LA L+ +M+
Sbjct: 200 LHNKASEA---VALVDQMVQRGCQPDL----VTYGTVVNGLCKRGDIDLALSLLKKMEKG 252
Query: 323 GLQPSSHTYDGFIRAIVSDRGLRNGMEVLKIMQQNNLKPQDSTIATL-SVECSKALELDL 381
++ Y+ I + + + + + + M ++P T ++L S C+ D
Sbjct: 253 KIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDA 312
Query: 382 AEALLDQISRCTNPK--PFSAFLAACDTMDKPERAIKIFAKM-RQKLRPDIRTYELLFSL 438
+ L D I R NP FSA + A K A K++ +M ++ + PDI TY L +
Sbjct: 313 SRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLING 372
Query: 439 FGNVNAPYEEGNMFSQVDSAKRINA--IEMDMARNNIQHSHISMKNLLKALGAE-GMIRE 495
F M ++D AK + I D N + +S + +K KA E GM E
Sbjct: 373 FC----------MHDRLDEAKHMFELMISKDCFPNVVTYSTL-IKGFCKAKRVEEGM--E 419
Query: 496 LIQYFCDSKTPLGTPTYNTVLHSLVEAQESHRAMEIFKQMKTCGIPPNAATYNIMIDCCS 555
L + T TY T++H +A++ A +FKQM + G+ PN TYNI++D
Sbjct: 420 LFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLD--G 477
Query: 556 IIRCFKSASALVSM--MVRDGFYPQTMTYTALIKILLDYGDFDEALNLLDLVSLEGIPHD 613
+ + K A A+V + R P TY +I+ + G ++ L +SL+G+ +
Sbjct: 478 LCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPN 537
Query: 614 VLLYNTILKKACEKGRIDVIEFIIEQMHQNKVQPDPSTCHFVFSGYVNCGFHNSAMEALQ 673
V+ YNT++ C KG + + ++++M ++ P+ T + + + G ++ E ++
Sbjct: 538 VIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIK 597
Query: 674 VLSMRMLCEEVSTL 687
+ + ST+
Sbjct: 598 EMRSCGFAGDASTI 611
Score = 66.6 bits (161), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 100/226 (44%), Gaps = 7/226 (3%)
Query: 439 FGNVNAPYEEGNMFSQVDSAKRINAIEM--DMARNNIQHSHISMKNLLKALGAEGMIREL 496
F + + Y E D K +A+++ DM ++ S + LL A+ EL
Sbjct: 43 FASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKF-EL 101
Query: 497 IQYFCDSKTPLGTP----TYNTVLHSLVEAQESHRAMEIFKQMKTCGIPPNAATYNIMID 552
+ + LG TY+ ++ + A+ + +M G P+ T + +++
Sbjct: 102 VISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLN 161
Query: 553 CCSIIRCFKSASALVSMMVRDGFYPQTMTYTALIKILLDYGDFDEALNLLDLVSLEGIPH 612
+ A ALV MV G+ P T T+T LI L + EA+ L+D + G
Sbjct: 162 GYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQP 221
Query: 613 DVLLYNTILKKACEKGRIDVIEFIIEQMHQNKVQPDPSTCHFVFSG 658
D++ Y T++ C++G ID+ ++++M + K++ D + + G
Sbjct: 222 DLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDG 267
Score = 56.6 bits (135), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/279 (20%), Positives = 122/279 (43%), Gaps = 14/279 (5%)
Query: 93 ILNYCARSPDPLFVMETWRMMEEKEIGLNNKCYLLMMQALCKGGYLEEASNLIYFLGERY 152
++N + D + + ME+ +I + Y ++ LCK ++++A NL + +
Sbjct: 229 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNK- 287
Query: 153 GIYPILPVYNSFLGACAKLHSMVHANLCLDLMDSRMVGKNEVTYTELLKLAVWQKNLSAV 212
GI P + Y+S + A+ L M R + N VT++ L+ V + L
Sbjct: 288 GIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 347
Query: 213 HEIWEDYIKH-YSLSIFSLRKFVWSFTRLRDLKSAYETLQHMVALAMMGKLYINRTS--- 268
+++++ IK IF+ + F L A +HM L + + N +
Sbjct: 348 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA----KHMFELMISKDCFPNVVTYST 403
Query: 269 --EGRLRSSRLDIPIPLNALPVMKVL---RWSFSDVIHACGRTQNSGLAEQLMLQMQSLG 323
+G ++ R++ + L + L +++ +IH + ++ A+ + QM S+G
Sbjct: 404 LIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVG 463
Query: 324 LQPSSHTYDGFIRAIVSDRGLRNGMEVLKIMQQNNLKPQ 362
+ P+ TY+ + + + L M V + +Q++ ++P
Sbjct: 464 VHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPD 502
Score = 53.5 bits (127), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 82/433 (18%), Positives = 170/433 (39%), Gaps = 47/433 (10%)
Query: 125 YLLMMQALCKGGYLEEASNLIYFLGERYGIYPILPVYNSFLGACAKLHSMVHANLCLDLM 184
Y ++ LCK G ++ A +L+ + E+ I + +YN+ + K M A M
Sbjct: 226 YGTVVNGLCKRGDIDLALSLLKKM-EKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEM 284
Query: 185 DSRMVGKNEVTYTELLKLAVWQKNLSAVHEIWEDYI-KHYSLSIFSLRKFVWSFTRLRDL 243
D++ + + TY+ L+ S + D I + + ++ + + +F + L
Sbjct: 285 DNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKL 344
Query: 244 KSAYETLQHMVALAMMGKLYINRTSEGRLRSSRLDIPIPLNALPVMKVLRWSFSDVIHAC 303
A + M+ RS DI +++S +I+
Sbjct: 345 VEAEKLYDEMIK-----------------RSIDPDI--------------FTYSSLINGF 373
Query: 304 GRTQNSGLAEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRGLRNGMEVLKIMQQNNLKPQD 363
A+ + M S P+ TY I+ + + GME+ + M Q L
Sbjct: 374 CMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNT 433
Query: 364 STIATLSVECSKALELDLAEALLDQ-ISRCTNPK--PFSAFLAACDTMDKPERAIKIFAK 420
T TL +A + D A+ + Q +S +P ++ L K +A+ +F
Sbjct: 434 VTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEY 493
Query: 421 M-RQKLRPDIRTYELLFSLFGNVNAPYEEGNMFSQVDSAKRINAIEMDMARNNIQHSHIS 479
+ R + PDI TY ++ + +F + + + ++ N S
Sbjct: 494 LQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLS----LKGVSPNVIAYNTMISGFC 549
Query: 480 MKNLLKALGAEGMIRELIQYFCDSKTPLGTPTYNTVLHSLVEAQESHRAMEIFKQMKTCG 539
K + A+ +++++ + D P + TYNT++ + + + + E+ K+M++CG
Sbjct: 550 RKGSKEE--ADSLLKKMKE---DGPLP-NSGTYNTLIRARLRDGDREASAELIKEMRSCG 603
Query: 540 IPPNAATYNIMID 552
+A+T ++ +
Sbjct: 604 FAGDASTIGLVTN 616
Score = 35.8 bits (81), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/97 (20%), Positives = 45/97 (46%)
Query: 563 ASALVSMMVRDGFYPQTMTYTALIKILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILK 622
A L MV+ +P + + L+ + F+ ++L + + GI HD+ Y+ +
Sbjct: 67 AVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFIN 126
Query: 623 KACEKGRIDVIEFIIEQMHQNKVQPDPSTCHFVFSGY 659
C + ++ + ++ +M + +PD T + +GY
Sbjct: 127 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGY 163
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 102 bits (254), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/364 (23%), Positives = 169/364 (46%), Gaps = 20/364 (5%)
Query: 295 SFSDVIHACGRTQNSGLAEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRGLRNGMEVLKIM 354
++ V++ + + LA L+ +M++ ++ + Y I ++ R + + + M
Sbjct: 227 TYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEM 286
Query: 355 QQNNLKPQDSTIATL-SVECSKALELDLAEALLDQISRCTNPK--PFSAFLAACDTMDKP 411
+ ++P T ++L S C+ D + L D I R NP F+A + A K
Sbjct: 287 ENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKL 346
Query: 412 ERAIKIFAKM-RQKLRPDIRTYELLFSLFGNVNAPYEEGNMFSQVDSAKRINAIEMDMAR 470
A K++ +M ++ + PDI TY L + F M ++D AK + E+ +++
Sbjct: 347 VEAEKLYDEMIKRSIDPDIFTYSSLINGFC----------MHDRLDEAKHM--FELMISK 394
Query: 471 NNIQHSHISMKNLLKALGAEGMIRELIQYFCD-SKTPL--GTPTYNTVLHSLVEAQESHR 527
+ + ++ L+ I E ++ F + S+ L T TY T++H +A++
Sbjct: 395 DCFPNV-VTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDN 453
Query: 528 AMEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASALVSMMVRDGFYPQTMTYTALIK 587
A +FKQM + G+ PN TYN ++D + A + + R P TY +I+
Sbjct: 454 AQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIE 513
Query: 588 ILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILKKACEKGRIDVIEFIIEQMHQNKVQP 647
+ G ++ +L +SL+G+ DV++YNT++ C KG + + + +M ++ P
Sbjct: 514 GMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLP 573
Query: 648 DPST 651
D T
Sbjct: 574 DSGT 577
Score = 90.1 bits (222), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 114/529 (21%), Positives = 213/529 (40%), Gaps = 33/529 (6%)
Query: 196 YTELLKLAVWQKNLSAVHEIWEDYIKHYSL-SIFSLRKFVWSFTRLRDLKSAYETLQHMV 254
Y E+L+ + L ++ +K L SIF K + + +++ + M
Sbjct: 53 YREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQ 112
Query: 255 ALAMMGKLY-----IN---RTSEGRLRSSRLDIPIPLNALPVMKVLRWSFSDVIHACGRT 306
L + LY IN R S+ L + L + L P + L + H G+
Sbjct: 113 RLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCH--GKR 170
Query: 307 QNSGLAEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRGLRNGMEVLKIMQQNNLKPQDSTI 366
+ +A L+ QM +G +P + T+ I + + ++ M Q +P T
Sbjct: 171 ISDAVA--LVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTY 228
Query: 367 ATLSVECSKALELDLAEALLDQISRCTNPKPFSAFLAACDTMDK---PERAIKIFAKMRQ 423
+ K ++DLA LL+++ + D++ K + A+ +F +M
Sbjct: 229 GVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMEN 288
Query: 424 K-LRPDIRTYELLFSLFGNVNAPYEEGNMFSQVDSAKRINAIEMDMARNNIQHSHISMKN 482
K +RP++ TY L S N YE + S++ S DM I + ++
Sbjct: 289 KGVRPNVITYSSLISCLCN----YERWSDASRLLS---------DMIERKINPNVVTFNA 335
Query: 483 LLKALGAEGMIRELIQYFCDSKTPLGTP---TYNTVLHSLVEAQESHRAMEIFKQMKTCG 539
L+ A EG + E + + + P TY+++++ A +F+ M +
Sbjct: 336 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 395
Query: 540 IPPNAATYNIMIDCCSIIRCFKSASALVSMMVRDGFYPQTMTYTALIKILLDYGDFDEAL 599
PN TYN +I+ + L M + G T+TYT LI D D A
Sbjct: 396 CFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 455
Query: 600 NLLDLVSLEGIPHDVLLYNTILKKACEKGRIDVIEFIIEQMHQNKVQPDPSTCHFVFSGY 659
+ + +G+ +++ YNT+L C+ G+++ + E + ++K++P T + + G
Sbjct: 456 MVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGM 515
Query: 660 VNCGFHNSAMEALQVLSMRMLCEEVSTLEEKRSDFEDLILAEDSEAESR 708
G + LS++ + +V S F L E+++A R
Sbjct: 516 CKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFR 564
Score = 56.2 bits (134), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/288 (21%), Positives = 121/288 (42%), Gaps = 17/288 (5%)
Query: 93 ILNYCARSPDPLFVMETWRMMEEKEIGLNNKCYLLMMQALCKGGYLEEASNLIYFLGERY 152
++N + D ME +I N Y ++ +LCK + ++A NL + E
Sbjct: 231 VVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEM-ENK 289
Query: 153 GIYPILPVYNSFLGACAKLHSMVHANLCLDLMDSRMVGKNEVTYTELLKLAVWQKNLSAV 212
G+ P + Y+S + A+ L M R + N VT+ L+ V + L
Sbjct: 290 GVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEA 349
Query: 213 HEIWEDYIKH-YSLSIFSLRKFVWSFTRLRDLKSAYETLQHMVALAMMGKLYINRTS--- 268
+++++ IK IF+ + F L A +HM L + + N +
Sbjct: 350 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA----KHMFELMISKDCFPNVVTYNT 405
Query: 269 --EGRLRSSRLDIPIPLNALPVMKVL---RWSFSDVIHACGRTQNSGLAEQLMLQMQSLG 323
G ++ R+D + L + L +++ +IH + ++ A+ + QM S G
Sbjct: 406 LINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDG 465
Query: 324 LQPSSHTYDGFIRAIVSDRGLRNGMEVLKIMQQNNLKPQDSTIATLSV 371
+ P+ TY+ + + + L M V + +Q++ ++P TI T ++
Sbjct: 466 VHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP---TIYTYNI 510
Score = 39.7 bits (91), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 68/168 (40%), Gaps = 3/168 (1%)
Query: 508 GTPTYNTVLHSLVEAQESHRAMEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASALV 567
G+ Y +L + + + + A+ +F M P+ +N ++ + ++ F +L
Sbjct: 49 GSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLG 108
Query: 568 SMMVRDGFYPQTMTYTALIKILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILKKACEK 627
M R G TY LI AL LL + G ++ +++L C
Sbjct: 109 EKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHG 168
Query: 628 GRIDVIEFIIEQMHQNKVQPDPSTCHFVFSGYVNCGFHNSAMEALQVL 675
RI +++QM + +PD T + G HN A EA+ ++
Sbjct: 169 KRISDAVALVDQMVEMGYRPDTITFTTLIHGLF---LHNKASEAVALV 213
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 102 bits (253), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 168/366 (45%), Gaps = 22/366 (6%)
Query: 294 WSFSDVIHACGRTQNSGLAEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRGLRNGMEVLKI 353
+++ V++ + + LA L+ +M+ ++ Y I A+ + + + + + +
Sbjct: 221 FTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTE 280
Query: 354 MQQNNLKPQDSTIATL-SVECSKALELDLAEALLDQISRCTNPK--PFSAFLAACDTMDK 410
M ++P T +L C+ D + L D I R NP FSA + A K
Sbjct: 281 MDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 340
Query: 411 PERAIKIFAKM-RQKLRPDIRTYELLFSLFGNVNAPYEEGNMFSQVDSAKRINAIEMDMA 469
A K++ +M ++ + PDI TY L + F M ++D AK + E+ ++
Sbjct: 341 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFC----------MHDRLDEAKHM--FELMIS 388
Query: 470 RN---NIQHSHISMKNLLKALGAE-GMIRELIQYFCDSKTPLGTPTYNTVLHSLVEAQES 525
++ N+ + +K KA E GM EL + T TYNT++ L +A +
Sbjct: 389 KDCFPNVVTYNTLIKGFCKAKRVEEGM--ELFREMSQRGLVGNTVTYNTLIQGLFQAGDC 446
Query: 526 HRAMEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASALVSMMVRDGFYPQTMTYTAL 585
A +IFK+M + G+PP+ TY+I++D + A + + + P TY +
Sbjct: 447 DMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIM 506
Query: 586 IKILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILKKACEKGRIDVIEFIIEQMHQNKV 645
I+ + G ++ +L +SL+G+ +V++Y T++ C KG + + + +M ++
Sbjct: 507 IEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGT 566
Query: 646 QPDPST 651
P+ T
Sbjct: 567 LPNSGT 572
Score = 87.8 bits (216), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 94/445 (21%), Positives = 181/445 (40%), Gaps = 25/445 (5%)
Query: 276 RLDIPIPLNALPVMKVLRW-----SFSDVIHACGRTQNSGLAEQLMLQMQSLGLQPSSHT 330
R +P+ L L M L + + S +++ + A L+ QM + QP++ T
Sbjct: 128 RSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVT 187
Query: 331 YDGFIRAIVSDRGLRNGMEVLKIMQQNNLKPQDSTIATLSVECSKALELDLAEALLDQIS 390
++ I + + ++ M +P T T+ K ++DLA +LL ++
Sbjct: 188 FNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKME 247
Query: 391 RCTNPKPFSAFLAACDTM---DKPERAIKIFAKMRQK-LRPDIRTYELLFSLFGNVNAPY 446
+ + D + A+ +F +M K +RP++ TY L N
Sbjct: 248 KGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCN----- 302
Query: 447 EEGNMFSQVDSAKRINAIEMDMARNNIQHSHISMKNLLKALGAEGMIRELIQYFCDSKTP 506
+ + A R+ + DM I + ++ L+ A EG + E + + +
Sbjct: 303 -----YGRWSDASRLLS---DMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 354
Query: 507 LGTP---TYNTVLHSLVEAQESHRAMEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSA 563
P TY+++++ A +F+ M + PN TYN +I + +
Sbjct: 355 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEG 414
Query: 564 SALVSMMVRDGFYPQTMTYTALIKILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILKK 623
L M + G T+TY LI+ L GD D A + + +G+P D++ Y+ +L
Sbjct: 415 MELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDG 474
Query: 624 ACEKGRIDVIEFIIEQMHQNKVQPDPSTCHFVFSGYVNCGFHNSAMEALQVLSMRMLCEE 683
C+ G+++ + E + ++K++PD T + + G G + LS++ +
Sbjct: 475 LCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPN 534
Query: 684 VSTLEEKRSDFEDLILAEDSEAESR 708
V S F L E+++A R
Sbjct: 535 VIIYTTMISGFCRKGLKEEADALFR 559
Score = 74.7 bits (182), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 105/492 (21%), Positives = 191/492 (38%), Gaps = 27/492 (5%)
Query: 194 VTYTELLKLAVWQKNLS-AVHEIWEDYIKHYSLSIFSLRKFVWSFTRLRDLKSAYETLQH 252
VT + LL K +S AV + + ++ Y + + + A +
Sbjct: 151 VTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDR 210
Query: 253 MVALAMMGKLYINRTSEGRLRSSRLDIPIPLNALPVMKVLRWS-----FSDVIHACGRTQ 307
MVA L+ T L R DI + L+ L M+ + ++ +I A +
Sbjct: 211 MVARGCQPDLFTYGTVVNGL-CKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYK 269
Query: 308 NSGLAEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRGLRNGMEVLKIMQQNNLKPQDSTIA 367
N A L +M + G++P+ TY+ IR + + + +L M + + P T +
Sbjct: 270 NVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFS 329
Query: 368 TLSVECSKALELDLAEALLDQ-ISRCTNPKPF--SAFLAACDTMDKPERAIKIFAKMRQK 424
L K +L AE L D+ I R +P F S+ + D+ + A +F M K
Sbjct: 330 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 389
Query: 425 -LRPDIRTYELLFSLFGNVNAPYEEGNMFSQVDSAKRINAIEMDMARNNIQHSHISMKNL 483
P++ TY L F E +F + M++ + + ++ L
Sbjct: 390 DCFPNVVTYNTLIKGFCKAKRVEEGMELFRE-------------MSQRGLVGNTVTYNTL 436
Query: 484 LKALGAEG---MIRELIQYFCDSKTPLGTPTYNTVLHSLVEAQESHRAMEIFKQMKTCGI 540
++ L G M +++ + P TY+ +L L + + +A+ +F+ ++ +
Sbjct: 437 IQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKM 496
Query: 541 PPNAATYNIMIDCCSIIRCFKSASALVSMMVRDGFYPQTMTYTALIKILLDYGDFDEALN 600
P+ TYNIMI+ + L + G P + YT +I G +EA
Sbjct: 497 EPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADA 556
Query: 601 LLDLVSLEGIPHDVLLYNTILKKACEKGRIDVIEFIIEQMHQNKVQPDPSTCHFVFSGYV 660
L + +G + YNT+++ G +I++M D ST V +
Sbjct: 557 LFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLH 616
Query: 661 NCGFHNSAMEAL 672
+ S +E L
Sbjct: 617 DGRLEKSYLEML 628
Score = 63.2 bits (152), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 85/433 (19%), Positives = 177/433 (40%), Gaps = 47/433 (10%)
Query: 125 YLLMMQALCKGGYLEEASNLIYFLGERYGIYPILPVYNSFLGACAKLHSMVHANLCLDLM 184
Y ++ LCK G ++ A +L+ + E+ I + +Y + + A ++ A M
Sbjct: 223 YGTVVNGLCKRGDIDLALSLLKKM-EKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEM 281
Query: 185 DSRMVGKNEVTYTELLKLAVWQKNLSAVHEIWEDYI-KHYSLSIFSLRKFVWSFTRLRDL 243
D++ + N VTY L++ S + D I + + ++ + + +F + L
Sbjct: 282 DNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKL 341
Query: 244 KSAYETLQHMVALAMMGKLYINRTSEGRLRSSRLDIPIPLNALPVMKVLRWSFSDVIHAC 303
A + M+ RS DI +++S +I+
Sbjct: 342 VEAEKLYDEMIK-----------------RSIDPDI--------------FTYSSLINGF 370
Query: 304 GRTQNSGLAEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRGLRNGMEVLKIMQQNNLKPQD 363
A+ + M S P+ TY+ I+ + + GME+ + M Q L
Sbjct: 371 CMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNT 430
Query: 364 STIATLSVECSKALELDLAEALLDQISRCTNPK---PFSAFLAACDTMDKPERAIKIFAK 420
T TL +A + D+A+ + ++ P +S L K E+A+ +F
Sbjct: 431 VTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEY 490
Query: 421 MRQ-KLRPDIRTYELLFSLFGNVNAPYEEGNMFSQVDSAKRINAIEMDMARNNIQHSHIS 479
+++ K+ PDI TY ++ + ++F + + ++ ++ S
Sbjct: 491 LQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLS----LKGVKPNVIIYTTMISGFC 546
Query: 480 MKNLLKALGAEGMIRELIQYFCDSKTPLGTPTYNTVLHSLVEAQESHRAMEIFKQMKTCG 539
K L + A+ + RE+ + D P + TYNT++ + + + + E+ K+M++CG
Sbjct: 547 RKGLKEE--ADALFREMKE---DGTLP-NSGTYNTLIRARLRDGDKAASAELIKEMRSCG 600
Query: 540 IPPNAATYNIMID 552
+A+T +++I+
Sbjct: 601 FVGDASTISMVIN 613
Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 67/138 (48%)
Query: 511 TYNTVLHSLVEAQESHRAMEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASALVSMM 570
+YN +++ + A+ + +M G P+ T + +++ + A ALV M
Sbjct: 117 SYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQM 176
Query: 571 VRDGFYPQTMTYTALIKILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILKKACEKGRI 630
+ P T+T+ LI L + EA+ L+D + G D+ Y T++ C++G I
Sbjct: 177 FVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDI 236
Query: 631 DVIEFIIEQMHQNKVQPD 648
D+ ++++M + K++ D
Sbjct: 237 DLALSLLKKMEKGKIEAD 254
Score = 47.4 bits (111), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/278 (19%), Positives = 116/278 (41%), Gaps = 14/278 (5%)
Query: 93 ILNYCARSPDPLFVMETWRMMEEKEIGLNNKCYLLMMQALCKGGYLEEASNLIYFLGERY 152
++N + D + + ME+ +I + Y ++ ALC + +A NL + +
Sbjct: 226 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNK- 284
Query: 153 GIYPILPVYNSFLGACAKLHSMVHANLCLDLMDSRMVGKNEVTYTELLKLAVWQKNLSAV 212
GI P + YNS + A+ L M R + N VT++ L+ V + L
Sbjct: 285 GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 344
Query: 213 HEIWEDYIKH-YSLSIFSLRKFVWSFTRLRDLKSAYETLQHMVALAMMGKLYINRTS--- 268
+++++ IK IF+ + F L A +HM L + + N +
Sbjct: 345 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA----KHMFELMISKDCFPNVVTYNT 400
Query: 269 --EGRLRSSRLDIPIPLNALPVMKVL---RWSFSDVIHACGRTQNSGLAEQLMLQMQSLG 323
+G ++ R++ + L + L +++ +I + + +A+++ +M S G
Sbjct: 401 LIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG 460
Query: 324 LQPSSHTYDGFIRAIVSDRGLRNGMEVLKIMQQNNLKP 361
+ P TY + + L + V + +Q++ ++P
Sbjct: 461 VPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEP 498
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 135/595 (22%), Positives = 240/595 (40%), Gaps = 61/595 (10%)
Query: 93 ILNYCARSPDPLFVMETWRMMEEKE-----IGLNNKCYLLMMQALCKGGYLEEASNLIYF 147
++ C D L+V++ R M + E L CY ++ +L + G ++E +Y
Sbjct: 149 MIKSCDSVGDALYVLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQ-VYM 207
Query: 148 LGERYGIYPILPVYNSFLGACAKLHSMVHANLCLDLMDSRMVGKNEVTYTELLKLAVWQK 207
+ P + YN + KL ++ AN + + + + TYT L+ +K
Sbjct: 208 EMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRK 267
Query: 208 NLSAVHEIWEDYIKHYSLSIFSLRKFVWSFTRLRDLKSAYETLQHMVALAMMGKLYINRT 267
+L + +++ + R + AY L H + +A R
Sbjct: 268 DLDSAFKVFNE----------------MPLKGCRRNEVAYTHLIHGLCVA-------RRI 304
Query: 268 SEGRLRSSRLDIPIPLNALPVMKVLRWSFSDVIHACGRTQNSGLAEQLMLQMQSLGLQPS 327
E +D+ + + +R + CG + S A L+ +M+ G++P+
Sbjct: 305 DEA------MDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSE-ALNLVKEMEETGIKPN 357
Query: 328 SHTYDGFIRAIVSDRGLRNGMEVLKIMQQNNLKPQDSTI-ATLSVECSKALELDLAEA-- 384
HTY I ++ S E+L M + L P T A ++ C + + D +
Sbjct: 358 IHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVE 417
Query: 385 LLDQISRCTNPKPFSAFLAA-CDTMDKPERAIKIFAKM-RQKLRPDIRTYELLFSLFGNV 442
L++ N + ++ + C + +A+ + KM +K+ PD+ TY L +
Sbjct: 418 LMESRKLSPNTRTYNELIKGYCKS--NVHKAMGVLNKMLERKVLPDVVTYNSL------I 469
Query: 443 NAPYEEGNMFSQVDSAKRINAIEMDMARNNIQHSHISMKNLLKALGAEGMIRELIQYFCD 502
+ GN DSA R+ ++ D Q ++ SM + +L + E F D
Sbjct: 470 DGQCRSGNF----DSAYRLLSLMNDRGLVPDQWTYTSM---IDSLCKSKRVEEACDLF-D 521
Query: 503 SKTPLGT-PT---YNTVLHSLVEAQESHRAMEIFKQMKTCGIPPNAATYNIMIDCCSIIR 558
S G P Y ++ +A + A + ++M + PN+ T+N +I
Sbjct: 522 SLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADG 581
Query: 559 CFKSASALVSMMVRDGFYPQTMTYTALIKILLDYGDFDEALNLLDLVSLEGIPHDVLLYN 618
K A+ L MV+ G P T T LI LL GDFD A + + G D Y
Sbjct: 582 KLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYT 641
Query: 619 TILKKACEKGRIDVIEFIIEQMHQNKVQPDPSTCHFVFSGYVNCGFHNSAMEALQ 673
T ++ C +GR+ E ++ +M +N V PD T + GY + G N A + L+
Sbjct: 642 TFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLK 696
Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 124/577 (21%), Positives = 230/577 (39%), Gaps = 46/577 (7%)
Query: 113 MEEKEIGLNNKCYLLMMQALCKGGYLEEASNLIYFLGERYGIYPILPVYNSFLGACAKLH 172
MEE I N Y +++ +LC E+A L+ + E+ G+ P + YN+ + K
Sbjct: 349 MEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEK-GLMPNVITYNALINGYCKRG 407
Query: 173 SMVHANLCLDLMDSRMVGKNEVTYTELLKLAVWQKNLSAVHEIWEDYIKHYSL-SIFSLR 231
+ A ++LM+SR + N TY EL+K + N+ + ++ L + +
Sbjct: 408 MIEDAVDVVELMESRKLSPNTRTYNELIK-GYCKSNVHKAMGVLNKMLERKVLPDVVTYN 466
Query: 232 KFVWSFTRLRDLKSAYETLQHMVALAMMGKLYINRTSEGRL-RSSRLDIPIPL------N 284
+ R + SAY L M ++ + + L +S R++ L
Sbjct: 467 SLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQK 526
Query: 285 ALPVMKVLRWSFSDVIHACGRTQNSGLAEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRGL 344
+ V+ + D G+ + L + ML L P+S T++ I + +D L
Sbjct: 527 GVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCL---PNSLTFNALIHGLCADGKL 583
Query: 345 RNGMEVLKIMQQNNLKPQDSTIATLSVECSKALELDLAEALLDQ-ISRCTNPKP--FSAF 401
+ + + M + L+P ST L K + D A + Q +S T P ++ F
Sbjct: 584 KEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTF 643
Query: 402 LAACDTMDKPERAIKIFAKMRQK-LRPDIRTYELLFSLFGNVNAPYEEGNMFSQVDSAKR 460
+ + A + AKMR+ + PD+ TY L +G++ G D KR
Sbjct: 644 IQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDL------GQTNFAFDVLKR 697
Query: 461 INAIEMDMARNNIQHSHISM-KNLL-----KALGAE------------GMIRELIQYFCD 502
+ D QH+ +S+ K+LL K G+E + EL++ +
Sbjct: 698 MR----DTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVE 753
Query: 503 SKTPLGTPTYNTVLHSLVEAQESHRAMEIFKQM-KTCGIPPNAATYNIMIDCCSIIRCFK 561
+Y ++ + E A ++F M + GI P+ +N ++ CC ++
Sbjct: 754 HSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHN 813
Query: 562 SASALVSMMVRDGFYPQTMTYTALIKILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTIL 621
A+ +V M+ G PQ + LI L G+ + ++ + G D L + I+
Sbjct: 814 EAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIII 873
Query: 622 KKACEKGRIDVIEFIIEQMHQNKVQPDPSTCHFVFSG 658
++G ++ + M +N + T + G
Sbjct: 874 DGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
Score = 70.1 bits (170), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 79/175 (45%), Gaps = 1/175 (0%)
Query: 512 YNTVLHSLVEAQESHRAMEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASALVSMMV 571
Y ++H L A+ AM++F +MK P TY ++I A LV M
Sbjct: 291 YTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEME 350
Query: 572 RDGFYPQTMTYTALIKILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILKKACEKGRID 631
G P TYT LI L F++A LL + +G+ +V+ YN ++ C++G I+
Sbjct: 351 ETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIE 410
Query: 632 VIEFIIEQMHQNKVQPDPSTCHFVFSGYVNCGFHNSAMEALQVLSMRMLCEEVST 686
++E M K+ P+ T + + GY H AM L + R + +V T
Sbjct: 411 DAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHK-AMGVLNKMLERKVLPDVVT 464
Score = 67.4 bits (163), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 120/291 (41%), Gaps = 10/291 (3%)
Query: 402 LAACDTMDKPERAIKIFAKMRQKLRPDIRTYELLFSLFGNVNAPYEEGNMFSQVDSAKRI 461
+ +CD++ + + KM + R +++ Y+L+ G N F VD K++
Sbjct: 150 IKSCDSVGDALYVLDLCRKMNKDERFELK-YKLII---GCYNTLLNSLARFGLVDEMKQV 205
Query: 462 NAIEMDMARNNIQHSHISMKNLLKALGAEGMIRELIQYFCDSKTPLGTP---TYNTVLHS 518
M+M + + + + ++ G + E QY P TY +++
Sbjct: 206 Y---MEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMG 262
Query: 519 LVEAQESHRAMEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASALVSMMVRDGFYPQ 578
+ ++ A ++F +M G N Y +I + R A L M D +P
Sbjct: 263 YCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPT 322
Query: 579 TMTYTALIKILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILKKACEKGRIDVIEFIIE 638
TYT LIK L EALNL+ + GI ++ Y ++ C + + + ++
Sbjct: 323 VRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLG 382
Query: 639 QMHQNKVQPDPSTCHFVFSGYVNCGFHNSAMEALQVLSMRMLCEEVSTLEE 689
QM + + P+ T + + +GY G A++ ++++ R L T E
Sbjct: 383 QMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNE 433
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 96/455 (21%), Positives = 172/455 (37%), Gaps = 95/455 (20%)
Query: 4 PLLRTRFQLIADSFCKSKFHKHERRNVANKLELSRTLTTTMGLNEESISKATQMQIVDAL 63
P RT +LI +CKS HK V NK+ + L + N ++D
Sbjct: 426 PNTRTYNELIK-GYCKSNVHK--AMGVLNKMLERKVLPDVVTYN----------SLIDGQ 472
Query: 64 CRGERSRASHLLLNLGHAHHSLGADDFFHILNYCARSPDPLFVMETWRMMEEKEIGLNNK 123
CR +++ LL+L + D V + W
Sbjct: 473 CRSGNFDSAYRLLSLMN---------------------DRGLVPDQWT------------ 499
Query: 124 CYLLMMQALCKGGYLEEASNLIYFLGERYGIYPILPVYNSFLGACAKLHSMVHANLCLDL 183
Y M+ +LCK +EEA +L L E+ G+ P + +Y + + K + A+L L+
Sbjct: 500 -YTSMIDSLCKSKRVEEACDLFDSL-EQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEK 557
Query: 184 MDSRMVGKNEVTYTELLKLAVWQKNLSAVHEIWEDYIK-HYSLSIFSLRKFVWSFTRLRD 242
M S+ N +T+ L+ L + E +K ++ + + + D
Sbjct: 558 MLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGD 617
Query: 243 LKSAYETLQHMVALAMMGKLYINRT------SEGRLRSSRLDIPIPLNALPVMKVLR--- 293
AY Q M++ + T EGRL L+A +M +R
Sbjct: 618 FDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRL----------LDAEDMMAKMRENG 667
Query: 294 -----WSFSDVIHACGRTQNSGLAEQLMLQMQSLGLQPSSHTYDGFIRAIVSDR-GLRNG 347
+++S +I G + A ++ +M+ G +PS HT+ I+ ++ + G + G
Sbjct: 668 VSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKG 727
Query: 348 -----------------MEVLKIMQQNNLKPQDSTIATLSVECSKALELDLAEALLDQIS 390
+E+L+ M ++++ P + L + + L +AE + D +
Sbjct: 728 SEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQ 787
Query: 391 RCTNPKP----FSAFLAACDTMDKPERAIKIFAKM 421
R P F+A L+ C + K A K+ M
Sbjct: 788 RNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDM 822
>sp|Q9SIC9|PP178_ARATH Pentatricopeptide repeat-containing protein At2g31400,
chloroplastic OS=Arabidopsis thaliana GN=At2g31400 PE=2
SV=1
Length = 918
Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 128/277 (46%), Gaps = 16/277 (5%)
Query: 398 FSAFLAACDTMDKPERAIKIFAKMRQ-KLRPDIRTYELLFSLFGNVNAPYEEGNMFSQVD 456
FSA ++A E AI +F M++ LRP++ TY + ++A + G F QV
Sbjct: 271 FSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAV------IDACGKGGMEFKQV- 323
Query: 457 SAKRINAIEMDMARNNIQHSHISMKNLLKALGAEGM---IRELIQYFCDSKTPLGTPTYN 513
AK + +M RN +Q I+ +LL G+ R L + + +YN
Sbjct: 324 -AKFFD----EMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYN 378
Query: 514 TVLHSLVEAQESHRAMEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASALVSMMVRD 573
T+L ++ + + A EI QM I PN +Y+ +ID + F A L M
Sbjct: 379 TLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYL 438
Query: 574 GFYPQTMTYTALIKILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILKKACEKGRIDVI 633
G ++Y L+ I G +EAL++L ++ GI DV+ YN +L ++G+ D +
Sbjct: 439 GIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEV 498
Query: 634 EFIIEQMHQNKVQPDPSTCHFVFSGYVNCGFHNSAME 670
+ + +M + V P+ T + GY G + AME
Sbjct: 499 KKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAME 535
Score = 89.0 bits (219), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 93/442 (21%), Positives = 180/442 (40%), Gaps = 67/442 (15%)
Query: 294 WSFSDVIHACGRTQNSGLAEQ---LMLQMQSLGLQPSSHTYDGFIRAIVSDRGLRNGMEV 350
++FS +I A GR SGL E+ + M+ GL+P+ TY+ I A + GME
Sbjct: 269 YAFSALISAYGR---SGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACG-----KGGMEF 320
Query: 351 LKI------MQQNNLKPQDSTIATLSVECSKALELDLAEALLDQIS-RCTNPKPFS--AF 401
++ MQ+N ++P T +L CS+ + A L D+++ R FS
Sbjct: 321 KQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTL 380
Query: 402 LAACDTMDKPERAIKIFAKMR-QKLRPDIRTYELLFSLFGNVNAPYEEGNMFSQVDSAKR 460
L A + + A +I A+M +++ P++ +Y + F E N+F ++ R
Sbjct: 381 LDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEM----R 436
Query: 461 INAIEMDMARNNIQHSHISMKNLLKALGAEGMIRELIQYFCDSKTPLGTPTYNTVLHSLV 520
I +D +YNT+L
Sbjct: 437 YLGIALDRV-----------------------------------------SYNTLLSIYT 455
Query: 521 EAQESHRAMEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASALVSMMVRDGFYPQTM 580
+ S A++I ++M + GI + TYN ++ + + + M R+ P +
Sbjct: 456 KVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLL 515
Query: 581 TYTALIKILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILKKACEKGRIDVIEFIIEQM 640
TY+ LI G + EA+ + G+ DV+LY+ ++ C+ G + +I++M
Sbjct: 516 TYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEM 575
Query: 641 HQNKVQPDPSTCHFVFSGYVNCGFHNSAMEALQVLSMRMLCEEVSTLEEKRSDFEDLILA 700
+ + P+ T + + + + + + S+ +S L E + +
Sbjct: 576 TKEGISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFG 635
Query: 701 E-DSEAESRILQFCEDSNENLA 721
+ +E+ +R + CE+ + L+
Sbjct: 636 QLTTESNNRTTKDCEEGMQELS 657
Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 102/473 (21%), Positives = 180/473 (38%), Gaps = 61/473 (12%)
Query: 119 GLNNKCYLL--MMQALCKGGYLEEASNLIYFLGERYGIYPILPVYNSFLGACAKLHSMVH 176
G N Y ++ A + G EEA ++ + E YG+ P L YN+ + AC K M
Sbjct: 263 GYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE-YGLRPNLVTYNAVIDACGK-GGMEF 320
Query: 177 ANLC--LDLMDSRMVGKNEVTYTELLKL----AVWQKNLSAVHEIWEDYIKHYSLSIFSL 230
+ D M V + +T+ LL + +W+ + E+ I+ +FS
Sbjct: 321 KQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQ---DVFSY 377
Query: 231 RKFVWSFTRLRDLKSAYETLQHMVALAMMGKLYINRTS-EGRLRSSRLDIPIPLNALPVM 289
+ + + + A+E L M +M + T +G ++ R D LN M
Sbjct: 378 NTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFD--EALNLFGEM 435
Query: 290 KVL-----RWSFSDVIHACGRTQNSGLAEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRGL 344
+ L R S++ ++ + S A ++ +M S+G++ TY+ +
Sbjct: 436 RYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKY 495
Query: 345 RNGMEVLKIMQQNNLKPQDSTIATLSVECSKALELDLAEALLDQISRCTNPKPFSAFLAA 404
+V M++ ++ P T +TL SK A + + + A
Sbjct: 496 DEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSAL 555
Query: 405 CDTMDKP---ERAIKIFAKM-RQKLRPDIRTYELLFSLFG-----NVNAPYEEGNMFSQV 455
D + K A+ + +M ++ + P++ TY + FG + +A Y G
Sbjct: 556 IDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFS 615
Query: 456 DSAKRINAIEMDMARNNIQHSHISMKNLLKALGAEGMIRELIQYFCDSKTPLGTPTYNTV 515
SA L AL E +IQ F L T + N
Sbjct: 616 SSA-------------------------LSAL-TETEGNRVIQLFGQ----LTTESNNRT 645
Query: 516 LHSLVEA-QESHRAMEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASALV 567
E QE +E+F++M I PN T++ +++ CS F+ AS L+
Sbjct: 646 TKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLL 698
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 100 bits (249), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 110/516 (21%), Positives = 203/516 (39%), Gaps = 88/516 (17%)
Query: 152 YGIYPILPVYNSFLGACAKLHSMVHANLCLDLMDSRMVGKNEVTYTELLKLAVWQKNLSA 211
+GI P + +N + A + H + A L L+ M S + +E T+T +++ + + +L
Sbjct: 183 WGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDG 242
Query: 212 VHEIWEDYIKHY-SLSIFSLRKFVWSFTRLRDLKSAYETLQHMVALAMMGKLYINRTSEG 270
I E ++ S S S+ V F + ++ A +Q M
Sbjct: 243 ALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEM----------------- 285
Query: 271 RLRSSRLDIPIPLNALPVMKVLRWSFSDVIHACGRTQNSGLAEQLMLQMQSLGLQPSSHT 330
S D P +++F+ +++ + + A ++M M G P +T
Sbjct: 286 ----SNQDGFFPD---------QYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYT 332
Query: 331 YDGFIRAIVSDRGLRNGMEVLKIMQQNNLKPQDSTIATLSVECSKALELDLAEALLDQIS 390
Y+ I + ++ +EVL M + P T TL K +++ A L ++
Sbjct: 333 YNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLT 392
Query: 391 R-------CTNPKPFSAFLAACDTMDKPERAIKIFAKMRQK-LRPDIRTYELLFSLFGNV 442
CT F++ + A+++F +MR K PD TY +L
Sbjct: 393 SKGILPDVCT----FNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLID----- 443
Query: 443 NAPYEEGNMFSQVDSAKRINAIEMDMARNNIQHSHISMKNLLKALGAEGMIRELIQYFCD 502
S K A+ N+LK + G R +I
Sbjct: 444 ----------SLCSKGKLDEAL-----------------NMLKQMELSGCARSVI----- 471
Query: 503 SKTPLGTPTYNTVLHSLVEAQESHRAMEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKS 562
TYNT++ +A ++ A EIF +M+ G+ N+ TYN +ID R +
Sbjct: 472 --------TYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVED 523
Query: 563 ASALVSMMVRDGFYPQTMTYTALIKILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILK 622
A+ L+ M+ +G P TY +L+ GD +A +++ ++ G D++ Y T++
Sbjct: 524 AAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLIS 583
Query: 623 KACEKGRIDVIEFIIEQMHQNKVQPDPSTCHFVFSG 658
C+ GR++V ++ + + P + V G
Sbjct: 584 GLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQG 619
Score = 73.9 bits (180), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 104/501 (20%), Positives = 190/501 (37%), Gaps = 71/501 (14%)
Query: 196 YTELLKLAVWQKNLSAVHEIWEDYIKHYSLSIFSLRKFVWSFT-------RLRDLKSAYE 248
Y +L L V +L V I H +S++ ++ V +F R L+ A
Sbjct: 157 YNRMLNLLVDGNSLKLVE------ISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAIL 210
Query: 249 TLQHMVALAMM-GKLYINRTSEGRLRSSRLDIPIPLNALPVMKVLRWS---FSDVIHA-C 303
L+ M + ++ + +G + LD + + V WS + ++H C
Sbjct: 211 MLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFC 270
Query: 304 --GRTQNSGLAEQLMLQMQSL-GLQPSSHTYDGFIRAIVSDRGLRNGMEVLKIMQQNNLK 360
GR ++ A + +M + G P +T++ + + +++ +E++ +M Q
Sbjct: 271 KEGRVED---ALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYD 327
Query: 361 PQDSTIATLSVECSKALELDLAEALLDQISRCTNPKPFSAFLAACDTMDKPERAIKIFAK 420
P T ++ K E+ A +LDQ+
Sbjct: 328 PDVYTYNSVISGLCKLGEVKEAVEVLDQM------------------------------- 356
Query: 421 MRQKLRPDIRTYELLFSLFGNVNAPYEEGNMFSQVDSAKRINAIEMDMARNNIQHSHISM 480
+ + P+ TY L S N QV+ A + + + I +
Sbjct: 357 ITRDCSPNTVTYNTLISTLCKEN----------QVEEATELARV---LTSKGILPDVCTF 403
Query: 481 KNLLKALGAEGMIRELIQYFCDSKTPLGTP---TYNTVLHSLVEAQESHRAMEIFKQMKT 537
+L++ L R ++ F + ++ P TYN ++ SL + A+ + KQM+
Sbjct: 404 NSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMEL 463
Query: 538 CGIPPNAATYNIMIDCCSIIRCFKSASALVSMMVRDGFYPQTMTYTALIKILLDYGDFDE 597
G + TYN +ID + A + M G ++TY LI L ++
Sbjct: 464 SGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVED 523
Query: 598 ALNLLDLVSLEGIPHDVLLYNTILKKACEKGRIDVIEFIIEQMHQNKVQPDPSTCHFVFS 657
A L+D + +EG D YN++L C G I I++ M N +PD T + S
Sbjct: 524 AAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLIS 583
Query: 658 GYVNCGFHNSAMEALQVLSMR 678
G G A + L+ + M+
Sbjct: 584 GLCKAGRVEVASKLLRSIQMK 604
Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 82/376 (21%), Positives = 148/376 (39%), Gaps = 56/376 (14%)
Query: 319 MQSLGLQPSSHTYDGFIRAIVSDRGLRNGMEVLKI----MQQNNLKPQDSTIATLSVECS 374
+ GL+P +H Y+ + +V N +++++I M +KP ST L
Sbjct: 145 IDEFGLKPDTHFYNRMLNLLVDG----NSLKLVEISHAKMSVWGIKPDVSTFNVLIKALC 200
Query: 375 KALELDLAEALLDQISRCTNPKPFSAFLAACDTMDKPERAIKIFAKMRQKLRPDIRTYEL 434
+A +L A +L+ D P L PD +T+
Sbjct: 201 RAHQLRPAILMLE---------------------DMPSYG----------LVPDEKTFTT 229
Query: 435 LFSLFGNVNAPYEEGNMFSQVDSAKRINAIEMDMARNNIQHSHISMKNLLKALGAEGMIR 494
+ + EEG++ D A RI M S++S+ ++ EG +
Sbjct: 230 VMQGY------IEEGDL----DGALRIRE---QMVEFGCSWSNVSVNVIVHGFCKEGRVE 276
Query: 495 ELIQYFCDSKTPLG----TPTYNTVLHSLVEAQESHRAMEIFKQMKTCGIPPNAATYNIM 550
+ + + + G T+NT+++ L +A A+EI M G P+ TYN +
Sbjct: 277 DALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSV 336
Query: 551 IDCCSIIRCFKSASALVSMMVRDGFYPQTMTYTALIKILLDYGDFDEALNLLDLVSLEGI 610
I + K A ++ M+ P T+TY LI L +EA L +++ +GI
Sbjct: 337 ISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGI 396
Query: 611 PHDVLLYNTILKKACEKGRIDVIEFIIEQMHQNKVQPDPSTCHFVFSGYVNCGFHNSAME 670
DV +N++++ C V + E+M +PD T + + + G + A+
Sbjct: 397 LPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALN 456
Query: 671 ALQVLSMRMLCEEVST 686
L+ + + V T
Sbjct: 457 MLKQMELSGCARSVIT 472
Score = 66.2 bits (160), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 110/561 (19%), Positives = 218/561 (38%), Gaps = 61/561 (10%)
Query: 59 IVDALCRGERSRASHLLLNLGHAHHSLGADD--FFHILNYCARSPDPLFVMETWRMMEEK 116
++ ALCR + R + L+L + L D+ F ++ D + M E
Sbjct: 195 LIKALCRAHQLRPAILMLE-DMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEF 253
Query: 117 EIGLNNKCYLLMMQALCKGGYLEEASNLIYFLGERYGIYPILPVYNSFLGACAKLHSMVH 176
+N +++ CK G +E+A N I + + G +P +N+ + K + H
Sbjct: 254 GCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKH 313
Query: 177 ANLCLDLMDSRMVGKNEVTYTELLKLAVWQKNLSAVHEIWEDYI-KHYSLSIFSLRKFVW 235
A +D+M + TY ++ + E+ + I + S + + +
Sbjct: 314 AIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLIS 373
Query: 236 SFTRLRDLKSAYETLQHMVALAMMGKLYINRTSEGRLRSSRLDIPIPLNALPVMKVLRWS 295
+ + ++ A E + + TS+G LP + +
Sbjct: 374 TLCKENQVEEATELARVL-------------TSKG--------------ILPDV----CT 402
Query: 296 FSDVIHACGRTQNSGLAEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRGLRNGMEVLKIMQ 355
F+ +I T+N +A +L +M+S G +P TY+ I ++ S L + +LK M+
Sbjct: 403 FNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQME 462
Query: 356 QNNLKPQDSTIATLSVECSKALELDLAEALLDQ-----ISRCTNPKPFSAFLAACDTMDK 410
+ T TL KA + AE + D+ +SR N ++ + +
Sbjct: 463 LSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSR--NSVTYNTLIDGLCKSRR 520
Query: 411 PERAIKIFAKM-RQKLRPDIRTYELLFSLFGNVNAPYEEGNMFSQVDSAKRINAIEMDMA 469
E A ++ +M + +PD TY L + F + K+ I M
Sbjct: 521 VEDAAQLMDQMIMEGQKPDKYTYNSLLT-------------HFCRGGDIKKAADIVQAMT 567
Query: 470 RNNIQHSHISMKNLLKALGAEGMIR---ELIQYFCDSKTPLGTPTYNTVLHSLVEAQESH 526
N + ++ L+ L G + +L++ L YN V+ L +++
Sbjct: 568 SNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTT 627
Query: 527 RAMEIFKQM-KTCGIPPNAATYNIMI-DCCSIIRCFKSASALVSMMVRDGFYPQTMTYTA 584
A+ +F++M + PP+A +Y I+ C+ + A + ++ GF P+ +
Sbjct: 628 EAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYM 687
Query: 585 LIKILLDYGDFDEALNLLDLV 605
L + LL + + L+++V
Sbjct: 688 LAEGLLTLSMEETLVKLVNMV 708
>sp|Q9LVQ5|PP432_ARATH Pentatricopeptide repeat-containing protein At5g55840
OS=Arabidopsis thaliana GN=At5g55840 PE=2 SV=2
Length = 1096
Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 122/577 (21%), Positives = 232/577 (40%), Gaps = 55/577 (9%)
Query: 106 VMETWRMMEEKEIGLNNKCYLLMMQALCKGGYLEEASNLIYFLGERYGIYPILPVYNSFL 165
+M T+R+ N Y ++++ + G ++++ + +G YG P + N+ L
Sbjct: 112 LMTTYRLCNS-----NPSVYDILIRVYLREGMIQDSLEIFRLMG-LYGFNPSVYTCNAIL 165
Query: 166 GACAKLHSMVHANLCLDLMDSRMVGKNEVTYTELLKLAVWQKNLSAVHEIWEDYIKH-YS 224
G+ K V L M R + + T+ L+ + + + + + K Y+
Sbjct: 166 GSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYA 225
Query: 225 LSIFSLRKFVWSFTRLRDLKSAYETLQHMVALAMMGKLYI-----------NRTSEGRL- 272
+I + + + + K+A E L HM + + + NR ++G L
Sbjct: 226 PTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLL 285
Query: 273 -RSSRLDIPIPLNALPVMKVLRWSFSDVIHACGRTQNSGLAEQLMLQMQSLGLQPSSHTY 331
R R + P +++ +I+ +A QL+ +M S GL P+ T+
Sbjct: 286 LRDMRKRMIHPNEV---------TYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTF 336
Query: 332 DGFIRAIVSDRGLRNGMEVLKIMQQNNLKPQDSTIATLSVECSKALELDLAEALLDQISR 391
+ I +S+ + +++ +M+ L P + + L K E DLA ++ R
Sbjct: 337 NALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKR 396
Query: 392 ---CTNPKPFSAFLAACDTMDKPERAIKIFAKM-RQKLRPDIRTYELLFSLFGNVNAPYE 447
C ++ + + A+ + +M + + PDI TY L
Sbjct: 397 NGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALI----------- 445
Query: 448 EGNMFSQVDSAKRINAIEMDMARNNIQHSHISMKNLLKALGAEGMIRELIQYFCDSKTPL 507
N F +V K I + R + + I L+ G ++E I+ + ++
Sbjct: 446 --NGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIY-EAMILE 502
Query: 508 GTP----TYNTVLHSLVEAQESHRAMEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSA 563
G T+N ++ SL +A + A E + M + GI PN +++ +I+ A
Sbjct: 503 GHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKA 562
Query: 564 SALVSMMVRDGFYPQTMTYTALIKILLDYGDFDEALNLLDLVSLEGIPH--DVLLYNTIL 621
++ M + G +P TY +L+K L G EA L SL +P D ++YNT+L
Sbjct: 563 FSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLK--SLHAVPAAVDTVMYNTLL 620
Query: 622 KKACEKGRIDVIEFIIEQMHQNKVQPDPSTCHFVFSG 658
C+ G + + +M Q + PD T + SG
Sbjct: 621 TAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISG 657
Score = 77.0 bits (188), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 88/184 (47%), Gaps = 3/184 (1%)
Query: 483 LLKALGAEGMIRELIQYFCDSKTPLGTP---TYNTVLHSLVEAQESHRAMEIFKQMKTCG 539
L++ EGMI++ ++ F P T N +L S+V++ E K+M
Sbjct: 129 LIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRK 188
Query: 540 IPPNAATYNIMIDCCSIIRCFKSASALVSMMVRDGFYPQTMTYTALIKILLDYGDFDEAL 599
I P+ AT+NI+I+ F+ +S L+ M + G+ P +TY ++ G F A+
Sbjct: 189 ICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAI 248
Query: 600 NLLDLVSLEGIPHDVLLYNTILKKACEKGRIDVIEFIIEQMHQNKVQPDPSTCHFVFSGY 659
LLD + +G+ DV YN ++ C RI ++ M + + P+ T + + +G+
Sbjct: 249 ELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGF 308
Query: 660 VNCG 663
N G
Sbjct: 309 SNEG 312
Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/373 (21%), Positives = 148/373 (39%), Gaps = 49/373 (13%)
Query: 295 SFSDVIHACGRTQNSGLAEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRGLRNGMEVLKIM 354
+++ V+H + A +L+ M+S G+ TY+ I + + G +L+ M
Sbjct: 230 TYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDM 289
Query: 355 QQNNLKPQDSTIATLSVECSKALELDLAEALLDQI---SRCTNPKPFSAFLAACDTMDKP 411
++ + P + T TL S ++ +A LL+++ N F+A + +
Sbjct: 290 RKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNF 349
Query: 412 ERAIKIFAKMRQK-LRPDIRTYELLFSLFGNVNAPYEEGNMFSQVDSAKRINAIEMDMAR 470
+ A+K+F M K L P +Y +L NA ++ F M M R
Sbjct: 350 KEALKMFYMMEAKGLTPSEVSYGVLLDGLCK-NAEFDLARGFY------------MRMKR 396
Query: 471 NNIQHSHISMKNLLKALGAEGMIRELIQYFCDSKTPLGTPTYNTVLHSLVEAQESHRAME 530
N + I+ ++ L G + E A+
Sbjct: 397 NGVCVGRITYTGMIDGLCKNGFLDE--------------------------------AVV 424
Query: 531 IFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASALVSMMVRDGFYPQTMTYTALIKILL 590
+ +M GI P+ TY+ +I+ + FK+A +V + R G P + Y+ LI
Sbjct: 425 LLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCC 484
Query: 591 DYGDFDEALNLLDLVSLEGIPHDVLLYNTILKKACEKGRIDVIEFIIEQMHQNKVQPDPS 650
G EA+ + + + LEG D +N ++ C+ G++ E + M + + P+
Sbjct: 485 RMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTV 544
Query: 651 TCHFVFSGYVNCG 663
+ + +GY N G
Sbjct: 545 SFDCLINGYGNSG 557
Score = 67.0 bits (162), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 111/259 (42%), Gaps = 16/259 (6%)
Query: 421 MRQKLRPDIRTYELLFSLFGNVNAPYEEGNMFSQVDSAKRINAIEMDMARNNIQHSHISM 480
+++K+ PD+ T+ +L +N EG S ++ + + M ++ + ++
Sbjct: 185 LKRKICPDVATFNIL------INVLCAEG-------SFEKSSYLMQKMEKSGYAPTIVTY 231
Query: 481 KNLLKALGAEGMIR---ELIQYFCDSKTPLGTPTYNTVLHSLVEAQESHRAMEIFKQMKT 537
+L +G + EL+ + TYN ++H L + + + + M+
Sbjct: 232 NTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRK 291
Query: 538 CGIPPNAATYNIMIDCCSIIRCFKSASALVSMMVRDGFYPQTMTYTALIKILLDYGDFDE 597
I PN TYN +I+ S AS L++ M+ G P +T+ ALI + G+F E
Sbjct: 292 RMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKE 351
Query: 598 ALNLLDLVSLEGIPHDVLLYNTILKKACEKGRIDVIEFIIEQMHQNKVQPDPSTCHFVFS 657
AL + ++ +G+ + Y +L C+ D+ +M +N V T +
Sbjct: 352 ALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMID 411
Query: 658 GYVNCGFHNSAMEALQVLS 676
G GF + A+ L +S
Sbjct: 412 GLCKNGFLDEAVVLLNEMS 430
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 119/612 (19%), Positives = 236/612 (38%), Gaps = 56/612 (9%)
Query: 93 ILNYCARSPDPLFVMETWRMMEEKEIGLNNKCYLLMMQALCKGGYLEEASNLIYFLGERY 152
IL +S + + V + M +++I + + +++ LC G E++S L+ + E+
Sbjct: 164 ILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKM-EKS 222
Query: 153 GIYPILPVYNSFLGACAKLHSMVHANLCLDLMDSRMVGKNEVTYTELLKLAVWQKNLSAV 212
G P + YN+ L K A LD M S+ V + TY L+ ++
Sbjct: 223 GYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKG 282
Query: 213 HEIWEDYIKH-YSLSIFSLRKFVWSFTRLRDLKSAYETLQHMVALAM------MGKLYIN 265
+ + D K + + + F+ + A + L M++ + L
Sbjct: 283 YLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDG 342
Query: 266 RTSEGRLRSSRLDIPIPLNALPVMKVLRWSFSDVIHAC---GRTQNS--GLAEQLMLQMQ 320
SEG + + L +M+ + S+V + G +N+ LA ++M+
Sbjct: 343 HISEGNFKEA-------LKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMK 395
Query: 321 SLGLQPSSHTYDGFIRAIVSDRGLRNGMEVLKIMQQNNLKPQDSTIATLSVECSKALELD 380
G+ TY G I + + L + +L M ++ + P T + L K
Sbjct: 396 RNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFK 455
Query: 381 LAEALLDQISRCT---NPKPFSAFLAACDTMDKPERAIKIF-AKMRQKLRPDIRTYELLF 436
A+ ++ +I R N +S + C M + AI+I+ A + + D T+ +L
Sbjct: 456 TAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLV 515
Query: 437 SLFGNVNAPYEEGNMFSQVDSAKRI--NAIEMDMARNNIQHSHISMK------------- 481
+ E F + ++ I N + D N +S +K
Sbjct: 516 TSLCKA-GKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGH 574
Query: 482 --------NLLKALGAEGMIRE---LIQYFCDSKTPLGTPTYNTVLHSLVEAQESHRAME 530
+LLK L G +RE ++ + T YNT+L ++ ++ +A+
Sbjct: 575 HPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVS 634
Query: 531 IFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASALV---SMMVRDGFYPQTMTYTALIK 587
+F +M I P++ TY +I + R K+ A++ R P + YT +
Sbjct: 635 LFGEMVQRSILPDSYTYTSLIS--GLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVD 692
Query: 588 ILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILKKACEKGRIDVIEFIIEQMHQNKVQP 647
+ G + + + + G D++ N ++ G+I+ ++ +M P
Sbjct: 693 GMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGP 752
Query: 648 DPSTCHFVFSGY 659
+ +T + + GY
Sbjct: 753 NLTTYNILLHGY 764
Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 112/564 (19%), Positives = 211/564 (37%), Gaps = 62/564 (10%)
Query: 107 METWRMMEEKEIGLNNKCYLLMMQALCKGGYLEEASNLIYFLGERYGIYPILPVYNSFLG 166
++ + MME K + + Y +++ LCK + A Y +R G+ Y +
Sbjct: 353 LKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGF-YMRMKRNGVCVGRITYTGMID 411
Query: 167 ACAKLHSMVHANLCLDLMDSRMVGKNEVTYTELL----KLAVWQKNLSAVHEIWEDYIKH 222
K + A + L+ M + + VTY+ L+ K+ ++ V I+ +
Sbjct: 412 GLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSP 471
Query: 223 YSLSIFSLRKFVWSFTRLRDLKSAYETLQHMVALAMMGKLYINRTSEGRLRSSRLDIPIP 282
+ I+S +++ R+ LK A + M+ EG R
Sbjct: 472 NGI-IYS--TLIYNCCRMGCLKEAIRIYEAMIL-------------EGHTRD-------- 507
Query: 283 LNALPVMKVLRWSFSDVIHACGRTQNSGLAEQLMLQMQSLGLQPSSHTYDGFIRAIV-SD 341
++F+ ++ + + AE+ M M S G+ P++ ++D I S
Sbjct: 508 ----------HFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSG 557
Query: 342 RGLRNGMEVLKIMQQNNLKPQDSTIATLSVECSKALELDLAEALLDQ---ISRCTNPKPF 398
GL+ V M + P T +L K L AE L + + +
Sbjct: 558 EGLK-AFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMY 616
Query: 399 SAFLAACDTMDKPERAIKIFAKMRQK-LRPDIRTYELLFSLFGNVNAPYEEGNMFSQVDS 457
+ L A +A+ +F +M Q+ + PD TY L S +G +
Sbjct: 617 NTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLIS------GLCRKGKTVIAILF 670
Query: 458 AKRINAIEMDMARNNIQHSHISMKNLLKALGAEGMIRELIQYFCDSKTPLG-TP---TYN 513
AK A R N+ + + + + G + I YF + LG TP T N
Sbjct: 671 AKEAEA------RGNVLPNKVMYTCFVDGMFKAGQWKAGI-YFREQMDNLGHTPDIVTTN 723
Query: 514 TVLHSLVEAQESHRAMEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASALVSMMVRD 573
++ + + ++ +M PN TYNI++ S + ++ L ++ +
Sbjct: 724 AMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILN 783
Query: 574 GFYPQTMTYTALIKILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILKKACEKGRIDVI 633
G P +T +L+ + + + L +L G+ D +N ++ K C G I+
Sbjct: 784 GILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWA 843
Query: 634 EFIIEQMHQNKVQPDPSTCHFVFS 657
+++ M + D TC + S
Sbjct: 844 FDLVKVMTSLGISLDKDTCDAMVS 867
Score = 47.4 bits (111), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 90/487 (18%), Positives = 185/487 (37%), Gaps = 43/487 (8%)
Query: 125 YLLMMQALCKGGYLEEASNLIYFLGERYGIYPILP--VYNSFLGACAKLHSMVHANLCLD 182
Y +++ LCKGG+L EA FL + + + +YN+ L A K ++ A
Sbjct: 581 YGSLLKGLCKGGHLREAEK---FLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFG 637
Query: 183 LMDSRMVGKNEVTYTELLK---------LAV-WQKNLSAVHEIWEDYIKHYSLSIFSLRK 232
M R + + TYT L+ +A+ + K A + + + + +
Sbjct: 638 EMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKA 697
Query: 233 FVWSFTRLRDLKSAYETLQHMVALAMMGKLYINRTSEGRLRSSRLDIP--IPLNALPVMK 290
W + + L H + + + G++ + +P N P +
Sbjct: 698 GQWKAGIY--FREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLT 755
Query: 291 VLRWSFSDVIHACGRTQNSGLAEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRGLRNGMEV 350
+++ ++H + ++ + L + G+ P T + I L G+++
Sbjct: 756 ----TYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKI 811
Query: 351 LKIMQQNNLKPQDSTIATLSVECSKALELDLAEALLDQISRCT---NPKPFSAFLAACDT 407
LK ++ T L +C E++ A L+ ++ + A ++ +
Sbjct: 812 LKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNR 871
Query: 408 MDKPERAIKIFAKM-RQKLRPDIRTYELLFSLFGNVNAPYEEGNMFSQVDSAKRINAIEM 466
+ + + + +M +Q + P+ R Y G +N +V K ++
Sbjct: 872 NHRFQESRMVLHEMSKQGISPESRKY------IGLING-------LCRVGDIKTAFVVKE 918
Query: 467 DMARNNIQHSHISMKNLLKALGAEGMIRE---LIQYFCDSKTPLGTPTYNTVLHSLVEAQ 523
+M + I +++ +++AL G E L+++ K ++ T++H +
Sbjct: 919 EMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNG 978
Query: 524 ESHRAMEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASALVSMMVRDGFYPQTMTYT 583
A+E+ M CG+ + +YN++I A L M DGF TY
Sbjct: 979 NVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYK 1038
Query: 584 ALIKILL 590
ALI+ LL
Sbjct: 1039 ALIRGLL 1045
Score = 47.0 bits (110), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 109/611 (17%), Positives = 220/611 (36%), Gaps = 86/611 (14%)
Query: 113 MEEKEIGLNNKCYLLMMQALCKGGYLEEASNLIYFLGERYGIYPILPVYNSFLGACAKLH 172
M+ + + Y M+ LCK G+L+EA L+ + + GI P + Y++ + K+
Sbjct: 394 MKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEM-SKDGIDPDIVTYSALINGFCKVG 452
Query: 173 SMVHANLCLDLMDSRMVGKNEVTYTELLKLAVWQKNLSAVHEIWEDYI-KHYSLSIFSLR 231
A + + + N + Y+ L+ L I+E I + ++ F+
Sbjct: 453 RFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFN 512
Query: 232 KFVWSFTRLRDLKSAYETLQHMVALAMMGKLYINRTSEGRLRSSRLDIPIPLNALPVMKV 291
V S + + A E ++ M TS+G L ++
Sbjct: 513 VLVTSLCKAGKVAEAEEFMRCM-------------TSDGILPNT---------------- 543
Query: 292 LRWSFSDVIHACGRTQNSGLAEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRGLRNGMEVL 351
SF +I+ G + A + +M +G P+ TY ++ + LR + L
Sbjct: 544 --VSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFL 601
Query: 352 KIMQQNNLKPQDSTIATLSVECSKALELDLAEALLDQ-ISRCTNPKPFSAFLAACDTMDK 410
K + TL K+ L A +L + + R P ++ K
Sbjct: 602 KSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRK 661
Query: 411 PERAIKIFAKMRQKLRPDIRTYELLFSLFGNVNAPYEEGNMFSQVDSAKRINAIEMDMAR 470
+ I I + R ++ +++++ F V+ ++ G + + ++++
Sbjct: 662 GKTVIAILFAKEAEARGNVLPNKVMYTCF--VDGMFKAGQWKAGIYFREQMD-------- 711
Query: 471 NNIQHSH--ISMKNLLKALGAEGMIRELIQYFCDSKTPLGTP---TYNTVLHSLVEAQES 525
N+ H+ ++ ++ G I + + G P TYN +LH + ++
Sbjct: 712 -NLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDV 770
Query: 526 HRAMEIFKQMKTCGIPPNAAT-----------------------------------YNIM 550
+ +++ + GI P+ T +N++
Sbjct: 771 STSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNML 830
Query: 551 IDCCSIIRCFKSASALVSMMVRDGFYPQTMTYTALIKILLDYGDFDEALNLLDLVSLEGI 610
I C A LV +M G T A++ +L F E+ +L +S +GI
Sbjct: 831 ISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGI 890
Query: 611 PHDVLLYNTILKKACEKGRIDVIEFIIEQMHQNKVQPDPSTCHFVFSGYVNCGFHNSAME 670
+ Y ++ C G I + E+M +K+ P + CG + A
Sbjct: 891 SPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATL 950
Query: 671 ALQ-VLSMRML 680
L+ +L M+++
Sbjct: 951 LLRFMLKMKLV 961
Score = 41.6 bits (96), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 73/152 (48%), Gaps = 10/152 (6%)
Query: 512 YNTVLHSLVEAQESHRAMEIFKQM---KTCGIPPNAATYNIMIDCCSIIRCFKS--ASAL 566
Y +++ L + A + ++M K C PPN A + M+ ++ +C K+ A+ L
Sbjct: 897 YIGLINGLCRVGDIKTAFVVKEEMIAHKIC--PPNVAE-SAMVR--ALAKCGKADEATLL 951
Query: 567 VSMMVRDGFYPQTMTYTALIKILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILKKACE 626
+ M++ P ++T L+ + G+ EAL L ++S G+ D++ YN ++ C
Sbjct: 952 LRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCA 1011
Query: 627 KGRIDVIEFIIEQMHQNKVQPDPSTCHFVFSG 658
KG + + + E+M + + +T + G
Sbjct: 1012 KGDMALAFELYEEMKGDGFLANATTYKALIRG 1043
>sp|Q6NKW7|PP164_ARATH Pentatricopeptide repeat-containing protein At2g19280
OS=Arabidopsis thaliana GN=At2g19280 PE=2 SV=2
Length = 693
Score = 97.8 bits (242), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 107/443 (24%), Positives = 173/443 (39%), Gaps = 71/443 (16%)
Query: 305 RTQNSGLAEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRGLRNGMEVLKIMQQNNLKPQDS 364
R LA + + M S G ++ FIR SD G E+L M+ ++P
Sbjct: 248 RVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIV 307
Query: 365 TIATLSVECSKALELDLAEALLDQISRCTNPKPFSAFLAACD---TMDKPERAIKIFAKM 421
+ KA L A ++L ++ + + + D + KPE AIK+
Sbjct: 308 AFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSF 367
Query: 422 RQKLRPDIRTYELLFSLFGNVNAPYEEGNMFSQV-------DSAKRINAIE--MDMARNN 472
R LRP+I Y S + +F ++ D I+ ++ R +
Sbjct: 368 R--LRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTD 425
Query: 473 --IQHSHISMKN-----------LLKALGAEGMIRELIQYFCDSKT---PLGTPTYNTVL 516
Q+ +K+ L+ A G I + F + KT L TYN ++
Sbjct: 426 KAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLM 485
Query: 517 HSLVEAQESHRAMEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASALVSMMVRDGFY 576
H + + ++ E+ +M++ GI P+ ATYNI+I + A+ ++S ++R GF
Sbjct: 486 HGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFV 545
Query: 577 PQTMTYTALIKILLDYGDFDEALNLL----------DLVSLEGIPH-------------- 612
P T+ +T +I GDF EA L D+V+ + H
Sbjct: 546 PSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVL 605
Query: 613 -----------DVLLYNTILKKACEKGRIDVIEFIIEQMHQNKVQPDPSTCHFVFSGYVN 661
DV+LYNT++ C G I+ +I M Q + P+ ST H + G
Sbjct: 606 FNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGLEG 665
Query: 662 CGFHNSAMEALQVLSMRMLCEEV 684
F NS A ML EE+
Sbjct: 666 KRFVNSETHA------SMLLEEI 682
Score = 38.9 bits (89), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 68/155 (43%), Gaps = 8/155 (5%)
Query: 295 SFSDVIHACGRTQNSGLAEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRGLRNGMEVLKIM 354
++++++H G+T +L+ +M+S G+ P TY+ I ++V + E++ +
Sbjct: 480 TYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISEL 539
Query: 355 QQNNLKPQDSTIATLSVECSKALELDLAEAL-----LDQISRCTNPKPFSAFLAACDTMD 409
+ P ST+A V + D EA + + + SA L
Sbjct: 540 IRRGFVP--STLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQ 597
Query: 410 KPERAIKIFAKMRQK-LRPDIRTYELLFSLFGNVN 443
+ E+AI +F K+ L+PD+ Y L + +V
Sbjct: 598 RMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVG 632
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 97.1 bits (240), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 151/348 (43%), Gaps = 21/348 (6%)
Query: 320 QSLGLQPSSHTYDGFIRAIV-SDRGLRNGMEVLKIMQQNNLKPQDSTIATLSVECSKALE 378
Q+ G P +Y+ + A + S R + V K M ++ + P T L A
Sbjct: 161 QAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGN 220
Query: 379 LDLAEALLDQISR---CTNPKPFSAFLAACDTMDKPERAIKIFAKMRQK-LRPDIRTYEL 434
+D+A L D++ N ++ + + K + K+ M K L P++ +Y +
Sbjct: 221 IDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNV 280
Query: 435 LFSLFGNVNAPYEEGNMFSQVDSAKRINAIEMDMARNNIQHSHISMKNLLKALGAEGMIR 494
+ +N EG M K ++ + +M R ++ L+K EG
Sbjct: 281 V------INGLCREGRM-------KEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFH 327
Query: 495 ELIQYFCDSKTPLGTP---TYNTVLHSLVEAQESHRAMEIFKQMKTCGIPPNAATYNIMI 551
+ + + TP TY +++HS+ +A +RAME QM+ G+ PN TY ++
Sbjct: 328 QALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLV 387
Query: 552 DCCSIIRCFKSASALVSMMVRDGFYPQTMTYTALIKILLDYGDFDEALNLLDLVSLEGIP 611
D S A ++ M +GF P +TY ALI G ++A+ +L+ + +G+
Sbjct: 388 DGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLS 447
Query: 612 HDVLLYNTILKKACEKGRIDVIEFIIEQMHQNKVQPDPSTCHFVFSGY 659
DV+ Y+T+L C +D + +M + ++PD T + G+
Sbjct: 448 PDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGF 495
Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 118/566 (20%), Positives = 229/566 (40%), Gaps = 79/566 (13%)
Query: 127 LMMQALCKGGYLEEASNLIYFLGERYGIYPILPVYNSFLGAC--AKLHSMVHANLCLDLM 184
L++++ + +++A ++++ L + +G P + YN+ L A +K + N+ +++
Sbjct: 139 LVVKSYSRLSLIDKALSIVH-LAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEML 197
Query: 185 DSRMVGKNEVTYTELLKLAVWQKNLSAVHEIWEDYIKHYSL-SIFSLRKFVWSFTRLRDL 243
+S+ V N TY L++ + N+ +++ L ++ + + + +LR +
Sbjct: 198 ESQ-VSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKI 256
Query: 244 KSAYETLQHMVALAMMGKLY-INRTSEGRLRSSRL-DIPIPLNALPVMKVLRWSFSDVIH 301
++ L+ M + L N G R R+ ++ L M +S +V +
Sbjct: 257 DDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTE---MNRRGYSLDEVTY 313
Query: 302 AC---GRTQNSGLAEQLMLQMQSL--GLQPSSHTYDGFIRAIVSDRGLRNGMEVLKIMQQ 356
G + + L++ + L GL PS TY I ++ + ME L M+
Sbjct: 314 NTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRV 373
Query: 357 NNLKPQDSTIATLSVECSKALELDLAEALLDQIS-RCTNPK--PFSAFLAACDTMDKPER 413
L P + T TL S+ ++ A +L +++ +P ++A + K E
Sbjct: 374 RGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMED 433
Query: 414 AIKIFAKMRQK-LRPDIRTYELLFSLFGNVNAPYEEGNMFSQVDSAKRINAIEMDMARNN 472
AI + M++K L PD+ +Y + S F Y+ VD A R+
Sbjct: 434 AIAVLEDMKEKGLSPDVVSYSTVLSGFCR---SYD-------VDEALRVK---------- 473
Query: 473 IQHSHISMKNLLKALGAEGMIRELIQYFCDSKTPLGTPTYNTVLHSLVEAQESHRAMEIF 532
RE+++ T TY++++ E + + A +++
Sbjct: 474 ---------------------REMVE----KGIKPDTITYSSLIQGFCEQRRTKEACDLY 508
Query: 533 KQMKTCGIPPNAATYNIMIDCCSIIRCFKSASALVSMMVRDGFYPQTMTYTALIKILLDY 592
++M G+PP+ TY +I+ + + A L + MV G P +TY+ LI L
Sbjct: 509 EEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQ 568
Query: 593 GDFDEALNLL-DLVSLEGIPHDVLLYNTI--------------LKKACEKGRIDVIEFII 637
EA LL L E +P DV + I +K C KG + + +
Sbjct: 569 SRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVF 628
Query: 638 EQMHQNKVQPDPSTCHFVFSGYVNCG 663
E M +PD + + + G+ G
Sbjct: 629 ESMLGKNHKPDGTAYNIMIHGHCRAG 654
Score = 73.9 bits (180), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 107/475 (22%), Positives = 191/475 (40%), Gaps = 40/475 (8%)
Query: 226 SIFSLRKFVWSFTRLRDLKSAYETLQHMVALAMM-GKLYINRTSEGRLRSSRLDIPIPLN 284
S+F L V S++RL + A + A M G L N + +RS R +I N
Sbjct: 135 SVFDL--VVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKR-NISFAEN 191
Query: 285 ALPVMKVLR-----WSFSDVIHACGRTQNSGLAEQLMLQMQSLGLQPSSHTYDGFIRAIV 339
M + ++++ +I N +A L +M++ G P+ TY+ I
Sbjct: 192 VFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYC 251
Query: 340 SDRGLRNGMEVLKIMQQNNLKPQ----DSTIATLSVECSKALELDLAEALLDQISRCTNP 395
R + +G ++L+ M L+P + I L E + E+ +++ +
Sbjct: 252 KLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCRE-GRMKEVSFVLTEMNRRGYSLDE 310
Query: 396 KPFSAFLAACDTMDKPERAIKIFAKM-RQKLRPDIRTY-ELLFSL--FGNVN-------- 443
++ + +A+ + A+M R L P + TY L+ S+ GN+N
Sbjct: 311 VTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQ 370
Query: 444 ------APYEEG-----NMFSQVDSAKRINAIEMDMARNNIQHSHISMKNLLKALGAEGM 492
P E + FSQ + +M N S ++ L+ G
Sbjct: 371 MRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGK 430
Query: 493 IRELIQYFCDSKTPLGTP---TYNTVLHSLVEAQESHRAMEIFKQMKTCGIPPNAATYNI 549
+ + I D K +P +Y+TVL + + A+ + ++M GI P+ TY+
Sbjct: 431 MEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSS 490
Query: 550 MIDCCSIIRCFKSASALVSMMVRDGFYPQTMTYTALIKILLDYGDFDEALNLLDLVSLEG 609
+I R K A L M+R G P TYTALI GD ++AL L + + +G
Sbjct: 491 LIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKG 550
Query: 610 IPHDVLLYNTILKKACEKGRIDVIEFIIEQMHQNKVQPDPSTCHFVFSGYVNCGF 664
+ DV+ Y+ ++ ++ R + ++ ++ + P T H + N F
Sbjct: 551 VLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEF 605
Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 85/193 (44%), Gaps = 4/193 (2%)
Query: 489 AEGMIRELIQYFCDSKTPLGTPTYNTVLHSLVEAQESHRAMEIFKQMKTCGIPPNAATYN 548
AE + +E+++ S+ TYN ++ A A+ +F +M+T G PN TYN
Sbjct: 189 AENVFKEMLE----SQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYN 244
Query: 549 IMIDCCSIIRCFKSASALVSMMVRDGFYPQTMTYTALIKILLDYGDFDEALNLLDLVSLE 608
+ID +R L+ M G P ++Y +I L G E +L ++
Sbjct: 245 TLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRR 304
Query: 609 GIPHDVLLYNTILKKACEKGRIDVIEFIIEQMHQNKVQPDPSTCHFVFSGYVNCGFHNSA 668
G D + YNT++K C++G + +M ++ + P T + G N A
Sbjct: 305 GYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRA 364
Query: 669 MEALQVLSMRMLC 681
ME L + +R LC
Sbjct: 365 MEFLDQMRVRGLC 377
Score = 63.2 bits (152), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/309 (20%), Positives = 131/309 (42%), Gaps = 33/309 (10%)
Query: 400 AFLAACDTMDKPERAI----KIFAKM-RQKLRPDIRTYELL---FSLFGNVNAPYEEGNM 451
++ A D + +R I +F +M ++ P++ TY +L F GN++ +
Sbjct: 171 SYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVAL---TL 227
Query: 452 FSQVDSAKRINAIEMDMARNNIQHSHISMKN------LLKALGAEGMIRELIQYFCDSKT 505
F ++++ + + + N + + ++ LL+++ +G+ LI
Sbjct: 228 FDKMETKGCLPNV---VTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLI-------- 276
Query: 506 PLGTPTYNTVLHSLVEAQESHRAMEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASA 565
+YN V++ L + +M G + TYN +I F A
Sbjct: 277 -----SYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALV 331
Query: 566 LVSMMVRDGFYPQTMTYTALIKILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILKKAC 625
+ + M+R G P +TYT+LI + G+ + A+ LD + + G+ + Y T++
Sbjct: 332 MHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFS 391
Query: 626 EKGRIDVIEFIIEQMHQNKVQPDPSTCHFVFSGYVNCGFHNSAMEALQVLSMRMLCEEVS 685
+KG ++ ++ +M+ N P T + + +G+ G A+ L+ + + L +V
Sbjct: 392 QKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVV 451
Query: 686 TLEEKRSDF 694
+ S F
Sbjct: 452 SYSTVLSGF 460
Score = 60.5 bits (145), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 102/511 (19%), Positives = 194/511 (37%), Gaps = 74/511 (14%)
Query: 113 MEEKEIGLNNKCYLLMMQALCKGGYLEEASNLIYFLGERYGIYPILPVYNSFLGACAKLH 172
ME K N Y ++ CK +++ L+ + + G+ P L YN + +
Sbjct: 231 METKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALK-GLEPNLISYNVVINGLCREG 289
Query: 173 SMVHANLCLDLMDSRMVGKNEVTYTELLKLAVWQKNLSAVHEIWEDYIKH-YSLSIFSLR 231
M + L M+ R +EVTY L+K + N + + ++H + S+ +
Sbjct: 290 RMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYT 349
Query: 232 KFVWSFTRLRDLKSAYETLQHMVALAMMGKLYINRTSEGRLRSSRLDIPIPLNALPVMKV 291
+ S + ++ A E L M G + R
Sbjct: 350 SLIHSMCKAGNMNRAMEFLDQMRV-------------RGLCPNER--------------- 381
Query: 292 LRWSFSDVIHACGRTQNSGLAEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRGLRNGMEVL 351
+++ ++ + A +++ +M G PS TY+ I + + + VL
Sbjct: 382 ---TYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVL 438
Query: 352 KIMQQNNLKPQDSTIATLSVECSKALELDLAEAL---LDQISRCTNPK--PFSAFLAACD 406
+ M++ L P + +T+ ++ ++D EAL + + + P +S+ +
Sbjct: 439 EDMKEKGLSPDVVSYSTVLSGFCRSYDVD--EALRVKREMVEKGIKPDTITYSSLIQGFC 496
Query: 407 TMDKPERAIKIFAKM-RQKLRPDIRTYELLFSLFGNVNAPYEEGNMFSQVDSAKRINAIE 465
+ + A ++ +M R L PD TY L +NA EG++ ++ +
Sbjct: 497 EQRRTKEACDLYEEMLRVGLPPDEFTYTAL------INAYCMEGDL-------EKALQLH 543
Query: 466 MDMARNNIQHSHISMKNLLKALGAEGMIRE----LIQYFCDSKTPLGTPTYNTVLH---- 517
+M + ++ L+ L + RE L++ F + P TY+T++
Sbjct: 544 NEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVP-SDVTYHTLIENCSN 602
Query: 518 -------SLVEA----QESHRAMEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASAL 566
SL++ A ++F+ M P+ YNIMI + A L
Sbjct: 603 IEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTL 662
Query: 567 VSMMVRDGFYPQTMTYTALIKILLDYGDFDE 597
MV+ GF T+T AL+K L G +E
Sbjct: 663 YKEMVKSGFLLHTVTVIALVKALHKEGKVNE 693
Score = 44.7 bits (104), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 98/522 (18%), Positives = 203/522 (38%), Gaps = 96/522 (18%)
Query: 113 MEEKEIGLNNKCYLLMMQALCKGGYLEEASNLIYFLGERYGIYPILPVYNSFLGACAKLH 172
M + L+ Y +++ CK G +A +++ R+G+ P + Y S + + K
Sbjct: 301 MNRRGYSLDEVTYNTLIKGYCKEGNFHQAL-VMHAEMLRHGLTPSVITYTSLIHSMCKAG 359
Query: 173 SMVHANLCLDLMDSRMVGKNEVTYTELLKLAVWQKNLSAVHEIWEDYIKH-YSLSIFSLR 231
+M A LD M R + NE TYT L+ + ++ + + + + +S S+ +
Sbjct: 360 NMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYN 419
Query: 232 KFVWSFTRLRDLKSAYETLQHMVALAMMGKLYINRTSEGRLRSSRLDIPIPLNALPVMKV 291
+ ++ A L+ M + + D+
Sbjct: 420 ALINGHCVTGKMEDAIAVLEDM-----------------KEKGLSPDV------------ 450
Query: 292 LRWSFSDVIHACGRTQNSGLAEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRGLRNGMEVL 351
S+S V+ R+ + A ++ +M G++P + TY I+ R + ++
Sbjct: 451 --VSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLY 508
Query: 352 KIMQQNNLKPQDST-IATLSVECSKALELDLAEALLDQISRCTNPKPFSAFLAACDTMDK 410
+ M + L P + T A ++ C +E DL
Sbjct: 509 EEMLRVGLPPDEFTYTALINAYC---MEGDL----------------------------- 536
Query: 411 PERAIKIFAKMRQK-LRPDIRTYELLFSLFGNVNAPYEEGNMFSQVDSAKRI-------N 462
E+A+++ +M +K + PD+ TY +L + N S+ AKR+
Sbjct: 537 -EKALQLHNEMVEKGVLPDVVTYSVLINGL----------NKQSRTREAKRLLLKLFYEE 585
Query: 463 AIEMDMARNNIQH--SHISMK---NLLKALGAEGMIRELIQYF----CDSKTPLGTPTYN 513
++ D+ + + S+I K +L+K +GM+ E Q F + P GT YN
Sbjct: 586 SVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGT-AYN 644
Query: 514 TVLHSLVEAQESHRAMEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASALVSMMVRD 573
++H A + +A ++K+M G + T ++ ++++ ++R
Sbjct: 645 IMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRS 704
Query: 574 GFYPQTMTYTALIKILLDYGDFDEALNLLDLVSLEG-IPHDV 614
+ L++I G+ D L++L ++ +G +P+ +
Sbjct: 705 CELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPNGI 746
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 96.3 bits (238), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 95/416 (22%), Positives = 170/416 (40%), Gaps = 30/416 (7%)
Query: 312 AEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRGLRNGMEVLKIMQQNNLKPQDSTIATLSV 371
A L+ QM +G QP + T+ + + + +++ M +P T +
Sbjct: 154 AVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVIN 213
Query: 372 ECSKALELDLAEALLDQISRCTNPKPFSAFLAACDTMDK---PERAIKIFAKMRQK-LRP 427
K E DLA LL+++ + + D++ K + A+ +F +M K +RP
Sbjct: 214 GLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRP 273
Query: 428 DIRTYELLFSLFGNVNAPYEEGNMFSQVDSAKRINAIEMDMARNNIQHSHISMKNLLKAL 487
D+ TY L S N + + A R+ + DM I + ++ +L+ A
Sbjct: 274 DVFTYSSLISCLCN----------YGRWSDASRLLS---DMLERKINPNVVTFNSLIDAF 320
Query: 488 GAEG-------MIRELIQYFCDSKTPLGTPTYNTVLHSLVEAQESHRAMEIFKQMKTCGI 540
EG + E+IQ D TYN++++ A +IF M +
Sbjct: 321 AKEGKLIEAEKLFDEMIQRSIDPNIV----TYNSLINGFCMHDRLDEAQQIFTLMVSKDC 376
Query: 541 PPNAATYNIMIDCCSIIRCFKSASALVSMMVRDGFYPQTMTYTALIKILLDYGDFDEALN 600
P+ TYN +I+ + L M R G T+TYT LI D D A
Sbjct: 377 LPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQM 436
Query: 601 LLDLVSLEGIPHDVLLYNTILKKACEKGRIDVIEFIIEQMHQNKVQPDPSTCHFVFSGYV 660
+ + +G+ +++ YNT+L C+ G+++ + E + ++K++PD T + + G
Sbjct: 437 VFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMC 496
Query: 661 NCGFHNSAMEALQVLSMRMLCEEVSTLEEKRSDFEDLILAEDSEAESRILQFCEDS 716
G + LS++ + +V S F L E EA + ++ ED
Sbjct: 497 KAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKE--EAYTLFIKMKEDG 550
Score = 96.3 bits (238), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 113/531 (21%), Positives = 219/531 (41%), Gaps = 25/531 (4%)
Query: 155 YPILPVYNSFLGACAKLHSMVHANLCLDLMDSRMVGKNEVTYTELLKLAVWQKNLSAVHE 214
+P + ++ L A AK+ + M+ V N TY ++ + LS
Sbjct: 62 FPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALA 121
Query: 215 IWEDYIK-HYSLSIFSLRKFVWSFTRLRDLKSAYETLQHMVALAMMGKLYINRT-SEGRL 272
I +K Y SI +L + F + A + MV + T G
Sbjct: 122 ILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLF 181
Query: 273 RSSRLDIPIPLNALPVMKVLR---WSFSDVIHACGRTQNSGLAEQLMLQMQSLGLQPSSH 329
+ ++ + L V+K + ++ VI+ + LA L+ +M+ ++
Sbjct: 182 QHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVV 241
Query: 330 TYDGFIRAIVSDRGLRNGMEVLKIMQQNNLKPQDSTIATL-SVECSKALELDLAEALLDQ 388
Y I ++ R + + + + M ++P T ++L S C+ D + L D
Sbjct: 242 IYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDM 301
Query: 389 ISRCTNPK--PFSAFLAACDTMDKPERAIKIFAKMRQK-LRPDIRTYELLFSLFGNVNAP 445
+ R NP F++ + A K A K+F +M Q+ + P+I TY L + F
Sbjct: 302 LERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFC----- 356
Query: 446 YEEGNMFSQVDSAKRINAIEMDMARNNIQHSHISMKNLLKALGAEGMIRELIQYFCD-SK 504
M ++D A++I + M + ++ L+ + + ++ F D S+
Sbjct: 357 -----MHDRLDEAQQIFTL---MVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSR 408
Query: 505 TPL--GTPTYNTVLHSLVEAQESHRAMEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKS 562
L T TY T++H +A + A +FKQM + G+ PN TYN ++D +
Sbjct: 409 RGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEK 468
Query: 563 ASALVSMMVRDGFYPQTMTYTALIKILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILK 622
A + + + P TY + + + G ++ +L +SL+G+ DV+ YNT++
Sbjct: 469 AMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMIS 528
Query: 623 KACEKGRIDVIEFIIEQMHQNKVQPDPSTCHFVFSGYVNCGFHNSAMEALQ 673
C+KG + + +M ++ PD T + + ++ G ++ E ++
Sbjct: 529 GFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIK 579
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/248 (20%), Positives = 104/248 (41%), Gaps = 20/248 (8%)
Query: 312 AEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRGLRNGMEVLKIMQQNNLKPQDSTIATLSV 371
A+Q+ M S P TY+ I + + +GME+ + M + L T TL
Sbjct: 364 AQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIH 423
Query: 372 ECSKALELDLAEALLDQ-ISRCTNPK--PFSAFLAACDTMDKPERAIKIFAKMRQ-KLRP 427
+A + D A+ + Q +S +P ++ L K E+A+ +F +++ K+ P
Sbjct: 424 GFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEP 483
Query: 428 DIRTYELLFSLFGNVNAPYEEGNMFSQVDSAKRINAIEMDMARNNIQHSHISMKNLLKAL 487
DI TY ++ + ++F ++ ++ I+ ++
Sbjct: 484 DIYTYNIMSEGMCKAGKVEDGWDLFCS-------------LSLKGVKPDVIAYNTMISGF 530
Query: 488 GAEGMIRELIQYFCDSKTPLGTP---TYNTVLHSLVEAQESHRAMEIFKQMKTCGIPPNA 544
+G+ E F K P TYNT++ + + + + E+ K+M++C +A
Sbjct: 531 CKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDA 590
Query: 545 ATYNIMID 552
+TY ++ D
Sbjct: 591 STYGLVTD 598
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 76/388 (19%), Positives = 147/388 (37%), Gaps = 38/388 (9%)
Query: 54 ATQMQIVDALC-RGERSRASHLLLNLGHAHHSLGADDFFHILNYCARSPDPLFVMETWRM 112
T +++ LC RGE A +LL + + +++ + + +
Sbjct: 206 VTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTE 265
Query: 113 MEEKEIGLNNKCYLLMMQALCKGGYLEEASNLIYFLGERYGIYPILPVYNSFLGACAKLH 172
M+ K I + Y ++ LC G +AS L+ + ER I P + +NS + A AK
Sbjct: 266 MDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLER-KINPNVVTFNSLIDAFAKEG 324
Query: 173 SMVHANLCLDLMDSRMVGKNEVTYTELLKLAVWQKNLSAVHEIWEDYIKHYSL-SIFSLR 231
++ A D M R + N VTY L+ L +I+ + L + +
Sbjct: 325 KLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYN 384
Query: 232 KFVWSFTRLRDLKSAYETLQHMVALAMMGKLYINRTSEGRLRSSRLDIPIPLNALPVMKV 291
+ F + + + E + M ++G
Sbjct: 385 TLINGFCKAKKVVDGMELFRDMSRRGLVGN------------------------------ 414
Query: 292 LRWSFSDVIHACGRTQNSGLAEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRGLRNGMEVL 351
+++ +IH + + A+ + QM S G+ P+ TY+ + + + L M V
Sbjct: 415 -TVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVF 473
Query: 352 KIMQQNNLKPQDSTIATLSVECSKALELDLAEALLDQIS-RCTNPK--PFSAFLAACDTM 408
+ +Q++ ++P T +S KA +++ L +S + P ++ ++
Sbjct: 474 EYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKK 533
Query: 409 DKPERAIKIFAKMRQKLR-PDIRTYELL 435
E A +F KM++ PD TY L
Sbjct: 534 GLKEEAYTLFIKMKEDGPLPDSGTYNTL 561
Score = 39.3 bits (90), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 67/165 (40%), Gaps = 40/165 (24%)
Query: 512 YNTVLHSLVEAQESHRAMEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASALVSMMV 571
++ +L ++ + ++ + ++M+ G+ N TYNIMI+C A A++ M+
Sbjct: 68 FSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMM 127
Query: 572 RDGFYPQTMTYTALIKILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILKKACEKGRID 631
+ G+ P +T N++L C RI
Sbjct: 128 KLGYGPSIVTL-----------------------------------NSLLNGFCHGNRIS 152
Query: 632 VIEFIIEQMHQNKVQPDPSTCHFVFSGYVNCGF-HNSAMEALQVL 675
+++QM + QPD T F+ V+ F HN A EA+ ++
Sbjct: 153 EAVALVDQMVEMGYQPDTVT----FTTLVHGLFQHNKASEAVALV 193
Score = 33.1 bits (74), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 18/97 (18%), Positives = 45/97 (46%)
Query: 563 ASALVSMMVRDGFYPQTMTYTALIKILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILK 622
A L MV+ +P + ++ L+ + FD ++ + + + G+ H++ YN ++
Sbjct: 49 AVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMIN 108
Query: 623 KACEKGRIDVIEFIIEQMHQNKVQPDPSTCHFVFSGY 659
C + ++ I+ +M + P T + + +G+
Sbjct: 109 CLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGF 145
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 96.3 bits (238), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 103/467 (22%), Positives = 185/467 (39%), Gaps = 32/467 (6%)
Query: 296 FSDVIHACGRTQNSGLAEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRGLRNGMEVLKIMQ 355
+ +IH+ + A QL+ +M +G P + T++ I + + +++ M
Sbjct: 255 YQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRML 314
Query: 356 QNNLKPQDSTIATLSVECSKALELDLAEALLDQISRCTNPKP----FSAFLAACDTMDKP 411
P D T L K +D A+ L +I PKP F+ + T +
Sbjct: 315 IRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRI-----PKPEIVIFNTLIHGFVTHGRL 369
Query: 412 ERAIKIFAKM--RQKLRPDIRTYELLFSLFGNVNAPYEEGNMFSQVDSAKRINAIEMDMA 469
+ A + + M + PD+ TY L + ++EG + ++ + DM
Sbjct: 370 DDAKAVLSDMVTSYGIVPDVCTYNSL------IYGYWKEGLVGLALE-------VLHDMR 416
Query: 470 RNNIQHSHISMKNLLKALGAEGMIRE----LIQYFCDSKTPLGTPTYNTVLHSLVEAQES 525
+ + S L+ G I E L + D P T +N ++ + +
Sbjct: 417 NKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKP-NTVGFNCLISAFCKEHRI 475
Query: 526 HRAMEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASALVSMMVRDGFYPQTMTYTAL 585
A+EIF++M G P+ T+N +I + K A L+ M+ +G T+TY L
Sbjct: 476 PEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTL 535
Query: 586 IKILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILKKACEKGRIDVIEFIIEQMHQNKV 645
I L G+ EA L++ + +G P D + YN+++K C G +D + E+M ++
Sbjct: 536 INAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGH 595
Query: 646 QPDPSTCHFVFSGYVNCGFHNSAMEALQVLSMRMLCEEVSTLEEKRSDFEDLILAEDSEA 705
P +C+ + +G G A+E + + +R ++ T + ED
Sbjct: 596 APSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLT 655
Query: 706 ESRILQFCEDSNENLAFTAALLQLRWCTIVGFPISWSLDRASGLEDS 752
R LQ + + F + W GF L G+ED
Sbjct: 656 MFRKLQAEGIPPDTVTFNTL---MSWLCKGGFVYDACLLLDEGIEDG 699
Score = 63.9 bits (154), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 127/286 (44%), Gaps = 20/286 (6%)
Query: 312 AEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRGLRNGMEVLKIMQQNNLKPQDSTIATLSV 371
A ++ +M + GL+P++ ++ I A + + +E+ + M + KP T +L
Sbjct: 443 AYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLIS 502
Query: 372 ECSKALELDLAEALL-DQISR--CTNPKPFSAFLAACDTMDKPERAIKIFAKMRQKLRP- 427
+ E+ A LL D IS N ++ + A + + A K+ +M + P
Sbjct: 503 GLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPL 562
Query: 428 DIRTYELLFSLFGNVNAPYEEGNMFSQVDSAKRINAIEMDMARNNIQHSHISMKNLLKAL 487
D TY L G A +VD A+ ++ M R+ S+IS L+ L
Sbjct: 563 DEITYNSLIK--GLCRA--------GEVDKAR---SLFEKMLRDGHAPSNISCNILINGL 609
Query: 488 GAEGMIRELIQYFCDSKTPLGTP---TYNTVLHSLVEAQESHRAMEIFKQMKTCGIPPNA 544
GM+ E +++ + TP T+N++++ L A + +F++++ GIPP+
Sbjct: 610 CRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDT 669
Query: 545 ATYNIMIDCCSIIRCFKSASALVSMMVRDGFYPQTMTYTALIKILL 590
T+N ++ A L+ + DGF P T++ L++ ++
Sbjct: 670 VTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSII 715
Score = 60.8 bits (146), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 72/160 (45%)
Query: 511 TYNTVLHSLVEAQESHRAMEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASALVSMM 570
+YN VL LV A +F M + IPP T+ +++ + SA +L+ M
Sbjct: 184 SYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDM 243
Query: 571 VRDGFYPQTMTYTALIKILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILKKACEKGRI 630
+ G P ++ Y LI L +EAL LL+ + L G D +N ++ C+ RI
Sbjct: 244 TKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRI 303
Query: 631 DVIEFIIEQMHQNKVQPDPSTCHFVFSGYVNCGFHNSAME 670
+ ++ +M PD T ++ +G G ++A +
Sbjct: 304 NEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKD 343
Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 68/171 (39%), Gaps = 8/171 (4%)
Query: 504 KTPLGTPTYNTVLHSLVEAQESHRAMEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSA 563
K P T+ V+ + E A+ + + M G PN+ Y +I S A
Sbjct: 212 KIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEA 271
Query: 564 SALVSMMVRDGFYPQTMTYTALIKILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILKK 623
L+ M G P T+ +I L + +EA +++ + + G D + Y ++
Sbjct: 272 LQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNG 331
Query: 624 ACEKGRIDVIEFIIEQMHQNKVQPDPSTCHF--VFSGYVNCGFHNSAMEAL 672
C+ GR+D + + ++ P P F + G+V G + A L
Sbjct: 332 LCKIGRVDAAKDLFYRI------PKPEIVIFNTLIHGFVTHGRLDDAKAVL 376
Score = 43.5 bits (101), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/196 (20%), Positives = 84/196 (42%), Gaps = 8/196 (4%)
Query: 469 ARNNIQHSHISMKNLLKALGAEG---MIRELIQYFCDSKTPLGTPTYNTVLHSLVEAQ-- 523
++N +HS + L+ LGA G I L+ D + +++ +A
Sbjct: 103 SQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFP 162
Query: 524 -ESHRAMEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASALVSMMVRDGFYPQTMTY 582
++ R M + + +C P +YN++++ C K A+ + M+ P T+
Sbjct: 163 GQTTRLMLEMRNVYSC--EPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTF 220
Query: 583 TALIKILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILKKACEKGRIDVIEFIIEQMHQ 642
++K + D AL+LL ++ G + ++Y T++ + R++ ++E+M
Sbjct: 221 GVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFL 280
Query: 643 NKVQPDPSTCHFVFSG 658
PD T + V G
Sbjct: 281 MGCVPDAETFNDVILG 296
Score = 36.6 bits (83), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 62/294 (21%), Positives = 113/294 (38%), Gaps = 20/294 (6%)
Query: 107 METWRMMEEKEIGLNNKCYLLMMQALCKGGYLEEASNLIYFLGERYGIYPILPVYNSFLG 166
+E M K N Y +++ CK G ++EA N++ + G+ P +N +
Sbjct: 409 LEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSAD-GLKPNTVGFNCLIS 467
Query: 167 ACAKLHSMVHANLCLDLMDSRMVGKNEVTYTELLKLAVWQKNLSAVHEIW--EDYIKHYS 224
A K H + A M + + T+ L+ + H +W D I
Sbjct: 468 AFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIK--HALWLLRDMISEGV 525
Query: 225 LS-IFSLRKFVWSFTRLRDLKSAYETLQHMVALAM-MGKLYINRTSEGRLRSSRLDIPIP 282
++ + + +F R ++K A + + MV + ++ N +G R+ +D
Sbjct: 526 VANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARS 585
Query: 283 LNALPVMKVLRWSFSDVIHACGRTQN----SGLAE---QLMLQMQSLGLQPSSHTYDGFI 335
L K+LR + +C N SG+ E + +M G P T++ I
Sbjct: 586 L----FEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLI 641
Query: 336 RAIVSDRGLRNGMEVLKIMQQNNLKPQDSTIATL-SVECSKALELDLAEALLDQ 388
+ + +G+ + + +Q + P T TL S C D A LLD+
Sbjct: 642 NGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYD-ACLLLDE 694
>sp|Q9SAD9|PPR40_ARATH Pentatricopeptide repeat-containing protein At1g13040,
mitochondrial OS=Arabidopsis thaliana GN=At1g13040 PE=2
SV=1
Length = 517
Score = 96.3 bits (238), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 86/382 (22%), Positives = 156/382 (40%), Gaps = 35/382 (9%)
Query: 294 WSFSDVIHACGRTQNSGLAEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRGLRNGMEVLKI 353
W+F+ + R G A Q M G +P +Y I + + + +E+
Sbjct: 115 WAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNA 174
Query: 354 MQQNNLKPQDSTIATLSVECSKALELDLAEALLDQISRCTNPK----PFSAFLAACDTMD 409
M ++ + P + A L V A ++DLA ++ + + K ++A ++
Sbjct: 175 MIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAG 234
Query: 410 KPERAIKIFAKMRQ-KLRPDIRTYELLFSLFGNVNAPYEEGNMFSQVDSAKRINAIEMDM 468
+ E+A + + M + PD+ TY +L + Y + NM KR + +M
Sbjct: 235 RIEKAEALKSYMSKIGCEPDLVTYNVLLNY-------YYDNNML------KRAEGVMAEM 281
Query: 469 ARNNIQHSHISMKNLLKALGAEGMIRELIQYFCDSKTPLG---TPTYNTVLHSLVEAQES 525
R+ IQ S LLK + + P G +Y+T++ + A +
Sbjct: 282 VRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNT 341
Query: 526 HRAMEIFKQMKTCGIPPNAATYNIMIDCCSIIRCF------KSASALVSMMVRDGFYPQT 579
+A +F++M+ G+ N TY S+I+ F A L+ M G P
Sbjct: 342 RKAYRLFEEMRQKGMVMNVVTYT------SLIKAFLREGNSSVAKKLLDQMTELGLSPDR 395
Query: 580 MTYTALIKILLDYGDFDEALNLL-DLVSLEGIPHDVLLYNTILKKACEKGRIDVIEFIIE 638
+ YT ++ L G+ D+A + D++ E P D + YN+++ C GR+ + E
Sbjct: 396 IFYTTILDHLCKSGNVDKAYGVFNDMIEHEITP-DAISYNSLISGLCRSGRVTEAIKLFE 454
Query: 639 QMHQNKVQPDPSTCHFVFSGYV 660
M + PD T F+ G +
Sbjct: 455 DMKGKECCPDELTFKFIIGGLI 476
Score = 42.0 bits (97), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 85/217 (39%), Gaps = 17/217 (7%)
Query: 480 MKNLLKALGAEGMIRELIQYFCD---SKTPLGTPTYNTVLHSLVEAQESHRAMEIFKQMK 536
+ NL+K+ GMI +Q F + S + + YN + LV A I+ MK
Sbjct: 16 IANLVKS----GMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMK 71
Query: 537 TCGIPPNAATYNIMIDCCSIIRCFKSASALVSMMVRDGFYPQTMTYTALIKILLDYGDFD 596
G TY+ I ++ F AL+S M GF P + + +L
Sbjct: 72 PMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVG 131
Query: 597 EALNLLDLVSLEGIPHDVLLYNTILKKACEKGRI-DVIEFIIEQMHQNKVQPDPSTCHFV 655
A+ + G DV+ Y ++ G++ D +E I M ++ V PD C +
Sbjct: 132 FAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVE-IWNAMIRSGVSPDNKACAAL 190
Query: 656 FSGYVNCGFHNSAMEALQVLSMRMLCEEVSTLEEKRS 692
G H ++ L+ M+ EE+ + K S
Sbjct: 191 VVGLC----HARKVD----LAYEMVAEEIKSARVKLS 219
Score = 35.4 bits (80), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 67/162 (41%), Gaps = 4/162 (2%)
Query: 511 TYNTVLHSLVEAQESHRAMEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASALVSMM 570
Y + + +LV++ A+++F +M+ + YN I F+ A A+ M
Sbjct: 11 AYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDM 70
Query: 571 VRDGFYPQTMTYTALIKILLDYGDFD--EALNLLDLVSLEGIPHDVLLYNTILKKACEKG 628
GF TY+ I L FD +AL L D+ +L IP D+ +N L C +
Sbjct: 71 KPMGFSLIPFTYSRFISGLCKVKKFDLIDAL-LSDMETLGFIP-DIWAFNVYLDLLCREN 128
Query: 629 RIDVIEFIIEQMHQNKVQPDPSTCHFVFSGYVNCGFHNSAME 670
++ M Q +PD + + +G G A+E
Sbjct: 129 KVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVE 170
Score = 32.7 bits (73), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 28/160 (17%), Positives = 66/160 (41%), Gaps = 2/160 (1%)
Query: 59 IVDALCRGERSRASHLLLN-LGHAHHSLGADDFFHILNYCARSPDPLFVMETWRMMEEKE 117
+++ CR +R ++ L + + + ++ R + + M E
Sbjct: 331 LIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELG 390
Query: 118 IGLNNKCYLLMMQALCKGGYLEEASNLIYFLGERYGIYPILPVYNSFLGACAKLHSMVHA 177
+ + Y ++ LCK G +++A + + E + I P YNS + + + A
Sbjct: 391 LSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIE-HEITPDAISYNSLISGLCRSGRVTEA 449
Query: 178 NLCLDLMDSRMVGKNEVTYTELLKLAVWQKNLSAVHEIWE 217
+ M + +E+T+ ++ + K LSA +++W+
Sbjct: 450 IKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWD 489
>sp|Q9SR00|PP213_ARATH Pentatricopeptide repeat-containing protein At3g04760,
chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2
SV=1
Length = 602
Score = 94.4 bits (233), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 113/465 (24%), Positives = 194/465 (41%), Gaps = 33/465 (7%)
Query: 221 KHYSLSIFSLRKFVWSFTRLRDLKSAYETLQHMVALAMMGKLYINRTSEGRLRSSRLDIP 280
K Y+ + K + F LR++ A ++ + N G + +R+D
Sbjct: 118 KGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPDVFAYNALINGFCKMNRIDDA 177
Query: 281 IPLNALPVMKVLRWSFSDVIHA------CGRTQNSGLAEQLMLQMQSLGLQPSSHTYDGF 334
L M+ +S V + C R + LA +++ Q+ S QP+ TY
Sbjct: 178 T--RVLDRMRSKDFSPDTVTYNIMIGSLCSRGK-LDLALKVLNQLLSDNCQPTVITYTIL 234
Query: 335 IRAIVSDRGLRNGMEVLKIMQQNNLKPQDSTIATLSVECSKALELDLAEALLDQIS-RCT 393
I A + + G+ ++++ M LKP T T+ K +D A ++ + +
Sbjct: 235 IEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGC 294
Query: 394 NPK--PFSAFLAACDTMDKPERAIKIFAKM-RQKLRPDIRTYELLFSLFGNVNAPYEEGN 450
P ++ L A K E K+ KM +K P++ TY +L + + EE
Sbjct: 295 EPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCR-DGKIEEA- 352
Query: 451 MFSQVDSAKRINAIEMDMARNNIQHSHISMKNLLKALGAEGMIRELIQYF----CDSKTP 506
+N +++ M + S L+ A EG + I++ D P
Sbjct: 353 ----------MNLLKL-MKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLP 401
Query: 507 LGTPTYNTVLHSLVEAQESHRAMEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASAL 566
YNTVL +L + ++ +A+EIF ++ G PN+++YN M A +
Sbjct: 402 -DIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHM 460
Query: 567 VSMMVRDGFYPQTMTYTALIKILLDYGDFDEALNLL-DLVSLEGIPHDVLLYNTILKKAC 625
+ M+ +G P +TY ++I L G DEA LL D+ S E P V+ YN +L C
Sbjct: 461 ILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHP-SVVTYNIVLLGFC 519
Query: 626 EKGRIDVIEFIIEQMHQNKVQPDPSTCHFVFSGYVNCGFHNSAME 670
+ RI+ ++E M N +P+ +T + G G+ AME
Sbjct: 520 KAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAME 564
Score = 73.9 bits (180), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 115/268 (42%), Gaps = 20/268 (7%)
Query: 312 AEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRGLRNGMEVLKIMQQNNLKPQDSTIATLSV 371
E+LM +M S P+ TY I + D + M +LK+M++ L P + L
Sbjct: 317 GEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIA 376
Query: 372 ECSKALELDLA-EALLDQISRCTNPK--PFSAFLAACDTMDKPERAIKIFAKMRQ-KLRP 427
+ LD+A E L IS P ++ LA K ++A++IF K+ + P
Sbjct: 377 AFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSP 436
Query: 428 DIRTYELLFSLFGNVNAPYEEGNMFSQVDSAKRINAIEMDMARNNIQHSHISMKNLLKAL 487
+ +Y +FS ++S D + ++ I ++M N I I+ +++ L
Sbjct: 437 NSSSYNTMFSA------------LWSSGDKIRALHMI-LEMMSNGIDPDEITYNSMISCL 483
Query: 488 GAEGMIRELIQYFCDSKTPLGTP---TYNTVLHSLVEAQESHRAMEIFKQMKTCGIPPNA 544
EGM+ E + D ++ P TYN VL +A A+ + + M G PN
Sbjct: 484 CREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNE 543
Query: 545 ATYNIMIDCCSIIRCFKSASALVSMMVR 572
TY ++I+ A L + +VR
Sbjct: 544 TTYTVLIEGIGFAGYRAEAMELANDLVR 571
Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/374 (20%), Positives = 156/374 (41%), Gaps = 25/374 (6%)
Query: 299 VIHACGRTQNSGLAEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRGLRNGMEVLKIMQQNN 358
+ H R+ N + L+ M G P I+ + R + + V++I+++
Sbjct: 95 IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG 154
Query: 359 LKPQDSTIATLSVECSKALELDLAEALLDQISRCTNPKP----FSAFLAACDTMDKPERA 414
+P L K +D A +LD++ R + P ++ + + + K + A
Sbjct: 155 -QPDVFAYNALINGFCKMNRIDDATRVLDRM-RSKDFSPDTVTYNIMIGSLCSRGKLDLA 212
Query: 415 IKIFAKM-RQKLRPDIRTYELLFSLFGNVNAPYEEGNMFSQVDSAKRINAIEMD-MARNN 472
+K+ ++ +P + TY +L + A EG VD A ++ MD M
Sbjct: 213 LKVLNQLLSDNCQPTVITYTIL------IEATMLEGG----VDEALKL----MDEMLSRG 258
Query: 473 IQHSHISMKNLLKALGAEGMIRELIQYFCDSKTPLGTP---TYNTVLHSLVEAQESHRAM 529
++ + +++ + EGM+ + + + P +YN +L +L+ +
Sbjct: 259 LKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGE 318
Query: 530 EIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASALVSMMVRDGFYPQTMTYTALIKIL 589
++ +M + PN TY+I+I + A L+ +M G P +Y LI
Sbjct: 319 KLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAF 378
Query: 590 LDYGDFDEALNLLDLVSLEGIPHDVLLYNTILKKACEKGRIDVIEFIIEQMHQNKVQPDP 649
G D A+ L+ + +G D++ YNT+L C+ G+ D I ++ + P+
Sbjct: 379 CREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNS 438
Query: 650 STCHFVFSGYVNCG 663
S+ + +FS + G
Sbjct: 439 SSYNTMFSALWSSG 452
Score = 63.2 bits (152), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 78/172 (45%)
Query: 509 TPTYNTVLHSLVEAQESHRAMEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASALVS 568
T TYN ++ SL + A+++ Q+ + P TY I+I+ + A L+
Sbjct: 193 TVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMD 252
Query: 569 MMVRDGFYPQTMTYTALIKILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILKKACEKG 628
M+ G P TY +I+ + G D A ++ + L+G DV+ YN +L+ +G
Sbjct: 253 EMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQG 312
Query: 629 RIDVIEFIIEQMHQNKVQPDPSTCHFVFSGYVNCGFHNSAMEALQVLSMRML 680
+ + E ++ +M K P+ T + + G AM L+++ + L
Sbjct: 313 KWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGL 364
Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/274 (19%), Positives = 122/274 (44%), Gaps = 20/274 (7%)
Query: 407 TMDKPERAIKIFAKMRQKLRPDIRTYELLFSLFGNVNAPYEEGNMFSQVDSAKRINAIEM 466
T+ +A+++ + + +PD+ Y L + F +N ++D A R+ +
Sbjct: 136 TLRNIPKAVRVMEILEKFGQPDVFAYNALINGFCKMN----------RIDDATRV----L 181
Query: 467 DMARN-NIQHSHISMKNLLKALGAEG----MIRELIQYFCDSKTPLGTPTYNTVLHSLVE 521
D R+ + ++ ++ +L + G ++ L Q D+ P TY ++ + +
Sbjct: 182 DRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPT-VITYTILIEATML 240
Query: 522 AQESHRAMEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASALVSMMVRDGFYPQTMT 581
A+++ +M + G+ P+ TYN +I A +V + G P ++
Sbjct: 241 EGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVIS 300
Query: 582 YTALIKILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILKKACEKGRIDVIEFIIEQMH 641
Y L++ LL+ G ++E L+ + E +V+ Y+ ++ C G+I+ +++ M
Sbjct: 301 YNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMK 360
Query: 642 QNKVQPDPSTCHFVFSGYVNCGFHNSAMEALQVL 675
+ + PD + + + + G + A+E L+ +
Sbjct: 361 EKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM 394
Score = 50.1 bits (118), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 71/153 (46%), Gaps = 6/153 (3%)
Query: 527 RAMEIFKQMKTCGIPPNAATYNIMIDC-CSIIRCFKSASALVSMMVRDGFYPQTMTYTAL 585
R MEI ++ P+ YN +I+ C + R + L M +D F P T+TY +
Sbjct: 145 RVMEILEKFGQ----PDVFAYNALINGFCKMNRIDDATRVLDRMRSKD-FSPDTVTYNIM 199
Query: 586 IKILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILKKACEKGRIDVIEFIIEQMHQNKV 645
I L G D AL +L+ + + V+ Y +++ +G +D ++++M +
Sbjct: 200 IGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGL 259
Query: 646 QPDPSTCHFVFSGYVNCGFHNSAMEALQVLSMR 678
+PD T + + G G + A E ++ L ++
Sbjct: 260 KPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELK 292
Score = 41.6 bits (96), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 82/195 (42%), Gaps = 2/195 (1%)
Query: 59 IVDALCR-GERSRASHLLLNLGHAHHSLGADDFFHILNYCARSPDPLFVMETWRMMEEKE 117
++ LC+ G+ +A + LG S + + + + S D + + M
Sbjct: 409 VLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNG 468
Query: 118 IGLNNKCYLLMMQALCKGGYLEEASNLIYFLGERYGIYPILPVYNSFLGACAKLHSMVHA 177
I + Y M+ LC+ G ++EA L+ + +P + YN L K H + A
Sbjct: 469 IDPDEITYNSMISCLCREGMVDEAFELLVDM-RSCEFHPSVVTYNIVLLGFCKAHRIEDA 527
Query: 178 NLCLDLMDSRMVGKNEVTYTELLKLAVWQKNLSAVHEIWEDYIKHYSLSIFSLRKFVWSF 237
L+ M NE TYT L++ + + E+ D ++ ++S +S ++ +F
Sbjct: 528 INVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAISEYSFKRLHRTF 587
Query: 238 TRLRDLKSAYETLQH 252
L L+ + +T +
Sbjct: 588 PLLNVLQRSSQTFGY 602
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 93.2 bits (230), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 85/400 (21%), Positives = 180/400 (45%), Gaps = 20/400 (5%)
Query: 295 SFSDVIHACGRTQNSGLAEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRGLRNGMEVLKIM 354
++ V++ + ++ LA L+ +M++ ++ ++ I ++ R + + + + K M
Sbjct: 227 TYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM 286
Query: 355 QQNNLKPQDSTIATL-SVECSKALELDLAEALLDQISRCTNPK--PFSAFLAACDTMDKP 411
+ ++P T ++L S CS D ++ L D I + NP F+A + A K
Sbjct: 287 ETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKF 346
Query: 412 ERAIKIFAKM-RQKLRPDIRTYELLFSLFGNVNAPYEEGNMFSQVDSAKRINAIEMDMAR 470
A K++ M ++ + PDI TY L + F M ++D AK++ M
Sbjct: 347 VEAEKLYDDMIKRSIDPDIFTYNSLVNGF----------CMHDRLDKAKQMFEF---MVS 393
Query: 471 NNIQHSHISMKNLLKALGAEGMIRELIQYF--CDSKTPLG-TPTYNTVLHSLVEAQESHR 527
+ ++ L+K + + + F + +G T TY T++ L +
Sbjct: 394 KDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDN 453
Query: 528 AMEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASALVSMMVRDGFYPQTMTYTALIK 587
A ++FKQM + G+PP+ TY+I++D + A + M + YT +I+
Sbjct: 454 AQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIE 513
Query: 588 ILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILKKACEKGRIDVIEFIIEQMHQNKVQP 647
+ G D+ +L +SL+G+ +V+ YNT++ C K + ++++M ++ P
Sbjct: 514 GMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLP 573
Query: 648 DPSTCHFVFSGYVNCGFHNSAMEALQVLSMRMLCEEVSTL 687
+ T + + ++ G ++ E ++ + + ST+
Sbjct: 574 NSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTI 613
Score = 86.7 bits (213), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 106/507 (20%), Positives = 201/507 (39%), Gaps = 33/507 (6%)
Query: 196 YTELLKLAVWQKNLSAVHEIWEDYIKHYSL-SIFSLRKFVWSFTRLRDLKSAYETLQHMV 254
Y E+L+ + L ++ +K L SI K + + +++ + M
Sbjct: 53 YREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQ 112
Query: 255 ALAMMGKLY-----IN---RTSEGRLRSSRLDIPIPLNALPVMKVLRWSFSDVIHACGRT 306
L ++ LY IN R S+ L + L + L P + L + H G+
Sbjct: 113 RLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCH--GKR 170
Query: 307 QNSGLAEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRGLRNGMEVLKIMQQNNLKPQDSTI 366
+ +A L+ QM +G +P + T+ I + + ++ M Q +P T
Sbjct: 171 ISDAVA--LVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTY 228
Query: 367 ATLSVECSKALELDLAEALLDQISRCTNPKPFSAFLAACDTMDK---PERAIKIFAKMRQ 423
+ K + DLA LL+++ F D++ K + A+ +F +M
Sbjct: 229 GVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMET 288
Query: 424 K-LRPDIRTYELLFSLFGNVNAPYEEGNMFSQVDSAKRINAIEMDMARNNIQHSHISMKN 482
K +RP++ TY L S + + + S DM I + ++
Sbjct: 289 KGIRPNVVTYSSLISCLCSYGRWSDASQLLS-------------DMIEKKINPNLVTFNA 335
Query: 483 LLKALGAEGMIRELIQYFCDSKTPLGTP---TYNTVLHSLVEAQESHRAMEIFKQMKTCG 539
L+ A EG E + + D P TYN++++ +A ++F+ M +
Sbjct: 336 LIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKD 395
Query: 540 IPPNAATYNIMIDCCSIIRCFKSASALVSMMVRDGFYPQTMTYTALIKILLDYGDFDEAL 599
P+ TYN +I + + + L M G T+TYT LI+ L GD D A
Sbjct: 396 CFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQ 455
Query: 600 NLLDLVSLEGIPHDVLLYNTILKKACEKGRIDVIEFIIEQMHQNKVQPDPSTCHFVFSGY 659
+ + +G+P D++ Y+ +L C G+++ + + M +++++ D + G
Sbjct: 456 KVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGM 515
Query: 660 VNCGFHNSAMEALQVLSMRMLCEEVST 686
G + + LS++ + V T
Sbjct: 516 CKAGKVDDGWDLFCSLSLKGVKPNVVT 542
Score = 53.1 bits (126), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 85/460 (18%), Positives = 179/460 (38%), Gaps = 76/460 (16%)
Query: 93 ILNYCARSPDPLFVMETWRMMEEKEIGLNNKCYLLMMQALCKGGYLEEASNLIYFLGERY 152
++N + D + ME +I + + ++ +LCK ++++A NL + E
Sbjct: 231 VVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM-ETK 289
Query: 153 GIYPILPVYNSFLGACAKLHSMVHANLCLDLMDSRMVGKNEVTYTELLKLAVWQKNLSAV 212
GI P + Y+S + A+ L M + + N VT+ L+ V +
Sbjct: 290 GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEA 349
Query: 213 HEIWEDYIKH-YSLSIFSLRKFVWSFTRLRDLKSAYETLQHMVALAMMGKLYINRTSEGR 271
++++D IK IF+ V F L A + + MV+
Sbjct: 350 EKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVS---------------- 393
Query: 272 LRSSRLDIPIPLNALPVMKVLRWSFSDVIHACGRTQNSGLAEQLMLQMQSLGLQPSSHTY 331
+ P + +++ +I +++ +L +M GL + TY
Sbjct: 394 -----------KDCFPDV----VTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTY 438
Query: 332 DGFIRAIVSDRGLRNGMEVLKIMQQNNLKPQDSTIATLSVECSKALELDLAEALLDQISR 391
I+ + D N +V K M + + P I T S+ LLD +
Sbjct: 439 TTLIQGLFHDGDCDNAQKVFKQMVSDGVPPD---IMTYSI-------------LLDGL-- 480
Query: 392 CTNPKPFSAFLAACDTMDKPERAIKIFAKMRQ-KLRPDIRTYELLFSLFGNVNAPYEEGN 450
C N K E+A+++F M++ +++ DI Y + + +
Sbjct: 481 CNNG--------------KLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWD 526
Query: 451 MFSQVDSAKRINAIEMDMARNNIQHSHISMKNLLKALGAEGMIRELIQYFCDSKTPLGTP 510
+F + + ++ ++ N S + K LL+ A +++++ + D P +
Sbjct: 527 LFCSL----SLKGVKPNVVTYNTMISGLCSKRLLQE--AYALLKKMKE---DGPLP-NSG 576
Query: 511 TYNTVLHSLVEAQESHRAMEIFKQMKTCGIPPNAATYNIM 550
TYNT++ + + + + E+ ++M++C +A+T ++
Sbjct: 577 TYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLV 616
Score = 36.2 bits (82), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 66/168 (39%), Gaps = 3/168 (1%)
Query: 508 GTPTYNTVLHSLVEAQESHRAMEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASALV 567
G+ Y +L + + + A+ +F M P+ +N ++ + ++ F +L
Sbjct: 49 GSGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLG 108
Query: 568 SMMVRDGFYPQTMTYTALIKILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILKKACEK 627
M R TY LI AL LL + G ++ +++L C
Sbjct: 109 EKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHG 168
Query: 628 GRIDVIEFIIEQMHQNKVQPDPSTCHFVFSGYVNCGFHNSAMEALQVL 675
RI +++QM + +PD T + G HN A EA+ ++
Sbjct: 169 KRISDAVALVDQMVEMGYRPDTITFTTLIHGLF---LHNKASEAVALV 213
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 92.4 bits (228), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/365 (23%), Positives = 153/365 (41%), Gaps = 21/365 (5%)
Query: 312 AEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRGLRNGMEVLKIMQQNNLKPQDSTIATLSV 371
A L+ QM +G QP + T+ + + + +++ M +P T +
Sbjct: 164 AVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVIN 223
Query: 372 ECSKALELDLAEALLDQISRCTNPKPFSAFLAACDTMDK---PERAIKIFAKMRQK-LRP 427
K E DLA LL+++ + + D + K + A +F KM K ++P
Sbjct: 224 GLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKP 283
Query: 428 DIRTYELLFSLFGNVNAPYEEGNMFSQVDSAKRINAIEMDMARNNIQHSHISMKNLLKAL 487
D+ TY L S N + + A R+ + DM NI + L+ A
Sbjct: 284 DVFTYNPLISCLCN----------YGRWSDASRLLS---DMLEKNINPDLVFFNALIDAF 330
Query: 488 GAEGMIRELIQYFCD-SKTPLGTP---TYNTVLHSLVEAQESHRAMEIFKQMKTCGIPPN 543
EG + E + + + K+ P YNT++ + + ME+F++M G+ N
Sbjct: 331 VKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGN 390
Query: 544 AATYNIMIDCCSIIRCFKSASALVSMMVRDGFYPQTMTYTALIKILLDYGDFDEALNLLD 603
TY +I R +A + MV DG +P MTY L+ L + G+ + AL + +
Sbjct: 391 TVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFE 450
Query: 604 LVSLEGIPHDVLLYNTILKKACEKGRIDVIEFIIEQMHQNKVQPDPSTCHFVFSGYVNCG 663
+ + D++ Y T+++ C+ G+++ + + V+P+ T + SG+ G
Sbjct: 451 YMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKG 510
Query: 664 FHNSA 668
A
Sbjct: 511 LKEEA 515
Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 93/424 (21%), Positives = 159/424 (37%), Gaps = 87/424 (20%)
Query: 296 FSDVIHACGRTQNSGLAEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRGLRNGMEVLKIMQ 355
FS ++ A + L L QMQ+LG+ + +TY FI L + +L M
Sbjct: 78 FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMM 137
Query: 356 QNNLKPQDSTIATLSVECSKALELDLAEALLDQISRCT---NPKPFSAFLAACDTMDKPE 412
+ P T+ +L + A AL+DQ+ + F+ + +K
Sbjct: 138 KLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKAS 197
Query: 413 RAIKIFAKMRQK-LRPDIRTYELLFSLFGNVNAPYEEGNMFSQVDSAKRINAIEMDMARN 471
A+ + +M K +PD+ TY + + P N+ ++++ K IE D+
Sbjct: 198 EAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGK----IEADVV-- 251
Query: 472 NIQHSHISMKNLLKALGAEGMIRELIQYFCDSKTPLGTPTYNTVLHSLVEAQESHRAMEI 531
YNT++ L + + A ++
Sbjct: 252 ---------------------------------------IYNTIIDGLCKYKHMDDAFDL 272
Query: 532 FKQMKTCGIPPNAATYNIMIDC-CSIIRCFKSASALVSMMVRDGFYPQTMTYTALIKILL 590
F +M+T GI P+ TYN +I C C+ R + AS L+S M+ P + + ALI +
Sbjct: 273 FNKMETKGIKPDVFTYNPLISCLCNYGR-WSDASRLLSDMLEKNINPDLVFFNALIDAFV 331
Query: 591 DYGDFDEALNLLD-LVSLEGIPHDVLLYNTILKKACEKGRI------------------- 630
G EA L D +V + DV+ YNT++K C+ R+
Sbjct: 332 KEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNT 391
Query: 631 ----------------DVIEFIIEQMHQNKVQPDPSTCHFVFSGYVNCGFHNSAMEALQV 674
D + + +QM + V PD T + + G N G +A+ +
Sbjct: 392 VTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEY 451
Query: 675 LSMR 678
+ R
Sbjct: 452 MQKR 455
Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 101/512 (19%), Positives = 183/512 (35%), Gaps = 36/512 (7%)
Query: 155 YPILPVYNSFLGACAKLHSMVHANLCLDLMDSRMVGKNEVTYTELLKLAVWQKNLSAVHE 214
+P + ++ L A AK++ + M + + N TY+ + + LS
Sbjct: 72 FPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALA 131
Query: 215 IWEDYIK-HYSLSIFSLRKFVWSFTRLRDLKSAYETLQHMVALAMMGKLYINRT-SEGRL 272
I +K Y SI +L + F + A + MV + T G
Sbjct: 132 ILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLF 191
Query: 273 RSSRLDIPIPLNALPVMKVLR---WSFSDVIHACGRTQNSGLAEQLMLQMQSLGLQPSSH 329
+ ++ + L V+K + ++ VI+ + LA L+ +M+ ++
Sbjct: 192 QHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVV 251
Query: 330 TYDGFIRAIVSDRGLRNGMEVLKIMQQNNLKPQDSTIATL-SVECSKALELDLAEALLDQ 388
Y+ I + + + + ++ M+ +KP T L S C+ D + L D
Sbjct: 252 IYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDM 311
Query: 389 ISRCTNPKP--FSAFLAACDTMDKPERAIKIFAKMRQKLR--PDIRTYELLF-------- 436
+ + NP F+A + A K A K++ +M + PD+ Y L
Sbjct: 312 LEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKR 371
Query: 437 --------------SLFGNVNAPYEEGNMFSQVDSAKRINAIEMDMARNNIQHSHISMKN 482
L GN + F Q + M + + ++
Sbjct: 372 VEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNI 431
Query: 483 LLKALGAEGMIRE---LIQYFCDSKTPLGTPTYNTVLHSLVEAQESHRAMEIFKQMKTCG 539
LL L G + + +Y L TY T++ +L +A + ++F + G
Sbjct: 432 LLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKG 491
Query: 540 IPPNAATYNIMIDCCSIIRCFKSASALVSMMVRDGFYPQTMTYTALIKILLDYGDFDEAL 599
+ PN TY M+ + A AL M DG P + TY LI+ L GD +
Sbjct: 492 VKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASA 551
Query: 600 NLLDLVSLEGIPHDVLLYNTILKKACEKGRID 631
L+ + G D + ++ GR+D
Sbjct: 552 ELIKEMRSCGFAGDASTFG-LVTNMLHDGRLD 582
Score = 50.8 bits (120), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 74/463 (15%), Positives = 163/463 (35%), Gaps = 112/463 (24%)
Query: 93 ILNYCARSPDPLFVMETWRMMEEKEIGLNNKCYLLMMQALCKGGYLEEASNLIYFLGERY 152
++N + +P + ME+ +I + Y ++ LCK ++++A +L + E
Sbjct: 221 VINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKM-ETK 279
Query: 153 GIYPILPVYNSFLGACAKLHSMVHANLCLDLMDSRMVGKNEVTYTELLKLAVWQKNLSAV 212
GI P + YN + A+ L M + + + V + L+ V + L
Sbjct: 280 GIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEA 339
Query: 213 HEIWEDYI--KHYSLSIFSLRKFVWSFTRLRDLKSAYETLQHMVALAMMGKLYINRTSEG 270
+++++ + KH + + + F + + ++ E + M ++G
Sbjct: 340 EKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTV------- 392
Query: 271 RLRSSRLDIPIPLNALPVMKVLRWSFSDVIHACGRTQNSGLAEQLMLQMQSLGLQPSSHT 330
+++ +IH + ++ A+ + QM S G+ P T
Sbjct: 393 ------------------------TYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMT 428
Query: 331 YDGFIRAIVSDRGLRNGMEVLKIMQQNNLKPQDSTIATLSVECSKALELDLAEALLDQIS 390
Y+ + + ++ + + V + MQ+ ++K T T+ KA
Sbjct: 429 YNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKA-------------- 474
Query: 391 RCTNPKPFSAFLAACDTMDKPERAIKIFAKMRQK-LRPDIRTYELLFSLFGNVNAPYEEG 449
K E +F + K ++P++ TY + S F E
Sbjct: 475 ------------------GKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEAD 516
Query: 450 NMFSQVDSAKRINAIEMDMARNNIQHSHISMKNLLKALGAEGMIRELIQYFCDSKTPLGT 509
+F + MK D P +
Sbjct: 517 ALF-------------------------VEMKE-------------------DGPLP-NS 531
Query: 510 PTYNTVLHSLVEAQESHRAMEIFKQMKTCGIPPNAATYNIMID 552
TYNT++ + + + + E+ K+M++CG +A+T+ ++ +
Sbjct: 532 GTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTN 574
Score = 33.1 bits (74), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 60/149 (40%), Gaps = 5/149 (3%)
Query: 528 AMEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASALVSMMVRDGFYPQTMTYTALIK 587
A+ +F M P+ ++ ++ + + F +L M G TY+ I
Sbjct: 59 AIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFIN 118
Query: 588 ILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILKKACEKGRIDVIEFIIEQMHQNKVQP 647
AL +L + G ++ N++L C RI +++QM + QP
Sbjct: 119 YFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQP 178
Query: 648 DPSTCHFVFSGYVNCGF-HNSAMEALQVL 675
D T F+ V+ F HN A EA+ ++
Sbjct: 179 DTVT----FTTLVHGLFQHNKASEAVALV 203
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 92.0 bits (227), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 114/495 (23%), Positives = 208/495 (42%), Gaps = 28/495 (5%)
Query: 206 QKNLSAVHEIWEDYIKHYSLSIFSLRKFVWSFTRLRDLKSAYETLQHMVALAMMGKLYI- 264
Q+ L +H + +D + S + F + D AY T M+ ++ +
Sbjct: 175 QEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTY 234
Query: 265 NRTSEGRLRSSRLDIPIP-LNALPVMKVLR--WSFSDVIHACGRTQNSGLAEQLMLQMQS 321
N ++ +D + LN + V+ +++ ++H + A + +M+S
Sbjct: 235 NSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRS 294
Query: 322 LGLQPSSHTYDGFIRAIVSDRGLRNG--MEVLKI---MQQNNLKPQDSTIATLSVECSKA 376
G++P TY +++ D +NG ME KI M + LKP+ +T TL +
Sbjct: 295 DGVEPDVVTY-----SLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATK 349
Query: 377 LELDLAEALLDQISR-CTNPK--PFSAFLAACDTMDKPERAIKIFAKMRQK-LRPDIRTY 432
L LLD + R +P FS + A K ++A+ +F+KMRQ+ L P+ TY
Sbjct: 350 GALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTY 409
Query: 433 ELLFSLFGNVNAPYEEGNMFSQVDSAKRINAIEMDMARNNIQHSHISMKNLLKALGAEGM 492
+ + + F Q+ I+ ++ NI ++ S+ + L
Sbjct: 410 GAVIGILCKSGRVEDAMLYFEQM--------IDEGLSPGNIVYN--SLIHGLCTCNKWER 459
Query: 493 IRELIQYFCDSKTPLGTPTYNTVLHSLVEAQESHRAMEIFKQMKTCGIPPNAATYNIMID 552
ELI D L T +N+++ S + + ++F+ M G+ PN TYN +I+
Sbjct: 460 AEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLIN 519
Query: 553 CCSIIRCFKSASALVSMMVRDGFYPQTMTYTALIKILLDYGDFDEALNLLDLVSLEGIPH 612
+ A L+S MV G P T+TY+ LI ++AL L + G+
Sbjct: 520 GYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSP 579
Query: 613 DVLLYNTILKKACEKGRIDVIEFIIEQMHQNKVQPDPSTCHFVFSGYVNCGFHNSAMEAL 672
D++ YN IL+ + R + + ++ ++ Q + ST + + G + A++
Sbjct: 580 DIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMF 639
Query: 673 QVLSMRMLCEEVSTL 687
Q L + L E T
Sbjct: 640 QNLCLMDLKLEARTF 654
Score = 57.0 bits (136), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 108/522 (20%), Positives = 207/522 (39%), Gaps = 54/522 (10%)
Query: 153 GIYPILPVYNSFLGACAKLHSMVHANLCLDLMDSRMVGKNEVTYTELL----KLAVWQKN 208
GI P + YNS + A K +M A L+ M V + +TY +L ++
Sbjct: 226 GILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEA 285
Query: 209 LSAVHEIWEDYIKHYSLSIFSLRKFVWSFTRLRDLKSAYETLQH---MVALAMMGKLYIN 265
+ + ++ D ++ ++ L ++ R + + ++++ + G L
Sbjct: 286 IGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQG 345
Query: 266 RTSEGRLRS--SRLDIPIPLNALPVMKVLRWSFSDVIHACGRTQNSGLAEQLML---QMQ 320
++G L LD+ + P + FS +I A + G +Q ML +M+
Sbjct: 346 YATKGALVEMHGLLDLMVRNGIHPD----HYVFSILICAYAK---QGKVDQAMLVFSKMR 398
Query: 321 SLGLQPSSHTYDGFIRAIVSDRGLRNGMEVLKIMQQNNLKPQDSTIATLSVECSKALELD 380
GL P++ TY I + + + M + M L P + +L + +
Sbjct: 399 QQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWE 458
Query: 381 LAEAL-LDQISR--CTNPKPFSAFLAACDTMDKPERAI---KIFAKM-RQKLRPDIRTYE 433
AE L L+ + R C N F++ + D+ K R I K+F M R ++P++ TY
Sbjct: 459 RAEELILEMLDRGICLNTIFFNSII---DSHCKEGRVIESEKLFELMVRIGVKPNVITYN 515
Query: 434 LLFS--------------LFGNVNAPYEEG--------NMFSQVDSAKRINAIEMDMARN 471
L + L G V+ + N + ++ + + +M +
Sbjct: 516 TLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESS 575
Query: 472 NIQHSHISMKNLLKAL---GAEGMIRELIQYFCDSKTPLGTPTYNTVLHSLVEAQESHRA 528
+ I+ +L+ L +EL +S T + TYN +LH L + + + A
Sbjct: 576 GVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDA 635
Query: 529 MEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASALVSMMVRDGFYPQTMTYTALIKI 588
+++F+ + + A T+NIMID + A L +G P TY + +
Sbjct: 636 LQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAEN 695
Query: 589 LLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILKKACEKGRI 630
++ G +E L + G D + N I+++ ++G I
Sbjct: 696 IIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEI 737
Score = 53.5 bits (127), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 108/566 (19%), Positives = 209/566 (36%), Gaps = 53/566 (9%)
Query: 128 MMQALCKGGYLEEASNLIYFLGERYGIYPILPVYNSFL-GACAKLHSMVHANLCLDLMDS 186
+++ LC +A +++ G P + YN L G C + S L + D
Sbjct: 128 LLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADD 187
Query: 187 RMVGK--NEVTYTELL----KLAVWQKNLSAVHEIWEDYIKHYSLSIFSLRKFVWSFTRL 240
R G + V+YT ++ K K S HE+ + I + + + + +
Sbjct: 188 RGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILP---DVVTYNSIIAALCKA 244
Query: 241 RDLKSAYETLQHMVALAMMGK-LYINRTSEGRLRSSRLDIPIPLNALPVMKVLR------ 293
+ + A E L MV +M + N G S + P A+ +K +R
Sbjct: 245 QAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQ-----PKEAIGFLKKMRSDGVEP 299
Query: 294 --WSFSDVIHACGRTQNSGLAEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRGLRNGMEVL 351
++S ++ + A ++ M GL+P TY ++ + L +L
Sbjct: 300 DVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLL 359
Query: 352 KIMQQNNLKPQDSTIATLSVECSKALELDLAEALLDQI-SRCTNPKP--FSAFLAACDTM 408
+M +N + P + L +K ++D A + ++ + NP + A +
Sbjct: 360 DLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKS 419
Query: 409 DKPERAIKIFAKM-RQKLRPDIRTYELLFSLFGNVNA-PYEEGNMFSQVDSAKRINAIEM 466
+ E A+ F +M + L P Y L N E + +D +N I
Sbjct: 420 GRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFF 479
Query: 467 D---------------------MARNNIQHSHISMKNLLKALGAEGMIRE---LIQYFCD 502
+ M R ++ + I+ L+ G + E L+
Sbjct: 480 NSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVS 539
Query: 503 SKTPLGTPTYNTVLHSLVEAQESHRAMEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKS 562
T TY+T+++ + A+ +FK+M++ G+ P+ TYNI++ R +
Sbjct: 540 VGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAA 599
Query: 563 ASALVSMMVRDGFYPQTMTYTALIKILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILK 622
A L + G + TY ++ L D+AL + + L + + +N ++
Sbjct: 600 AKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMID 659
Query: 623 KACEKGRIDVIEFIIEQMHQNKVQPD 648
+ GR D + + N + P+
Sbjct: 660 ALLKVGRNDEAKDLFVAFSSNGLVPN 685
Score = 41.2 bits (95), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 72/167 (43%), Gaps = 9/167 (5%)
Query: 528 AMEIFKQMKTCG---IPPNAATYNIMIDCCSIIRCFKSASALVSMMVRDGFYPQTMTYTA 584
A+ + +M G + P+ TY I+I CC A + +++ GF + +T
Sbjct: 68 AVSRYNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTP 127
Query: 585 LIKILLDYGDFDEALNLL--DLVSLEGIPHDVLLYNTILKKACEKGRIDVIEFIIEQMHQ 642
L+K L +A++++ + L IP +V YN +LK C++ R ++ M
Sbjct: 128 LLKGLCADKRTSDAMDIVLRRMTELGCIP-NVFSYNILLKGLCDENRSQEALELLHMMAD 186
Query: 643 NK---VQPDPSTCHFVFSGYVNCGFHNSAMEALQVLSMRMLCEEVST 686
++ PD + V +G+ G + A + R + +V T
Sbjct: 187 DRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVT 233
>sp|Q0WPZ6|PP158_ARATH Pentatricopeptide repeat-containing protein At2g17140
OS=Arabidopsis thaliana GN=At2g17140 PE=2 SV=1
Length = 874
Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/406 (21%), Positives = 172/406 (42%), Gaps = 26/406 (6%)
Query: 285 ALPVMKVLRWSFSD----------VIHACGRTQNSGLAEQLMLQMQSLGLQPSSHTYDGF 334
A P +++R F + ++ +C + + L M G+ P ++T++
Sbjct: 94 AFPQFQLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLL 153
Query: 335 IRAIVSDRGLRNGMEVLKIMQQNNLKPQDSTIATLSVECSKALELDLAEALLDQISR--- 391
IRA+ + E+ M + KP + T L KA D LL+ +
Sbjct: 154 IRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGV 213
Query: 392 CTNPKPFSAFLAACDTMDKPERAIKIFAKMRQK-LRPDIRTYELLFSLFGNVNAPYEEGN 450
N ++ +++ + + + K+ KMR++ L PDI T+ ++A +EG
Sbjct: 214 LPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFN------SRISALCKEGK 267
Query: 451 MFSQVDSAKRINAIEMDMARNNIQHSHISMKNLLKALGAEGMIRE---LIQYFCDSKTPL 507
+ +D+++ + +E+D + + I+ +LK G++ + L + ++
Sbjct: 268 V---LDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLA 324
Query: 508 GTPTYNTVLHSLVEAQESHRAMEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASALV 567
+YN L LV + A + KQM GI P+ +YNI++D + A +V
Sbjct: 325 SLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIV 384
Query: 568 SMMVRDGFYPQTMTYTALIKILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILKKACEK 627
+M R+G P +TY L+ G D A +LL + + N +L +
Sbjct: 385 GLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKM 444
Query: 628 GRIDVIEFIIEQMHQNKVQPDPSTCHFVFSGYVNCGFHNSAMEALQ 673
GRI E ++ +M++ D TC+ + G G + A+E ++
Sbjct: 445 GRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVK 490
Score = 66.2 bits (160), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 76/367 (20%), Positives = 155/367 (42%), Gaps = 26/367 (7%)
Query: 312 AEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRGLRNGMEVLKIMQQNNLKPQDSTIATLSV 371
AE ++ QM G+ PS ++Y+ + + L + ++ +M++N + P T L
Sbjct: 345 AETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLH 404
Query: 372 ECSKALELDLAEALLDQISR---CTNPKPFSAFLAACDTMDKPERAIKIFAKMRQK-LRP 427
++D A++LL ++ R N + L + M + A ++ KM +K
Sbjct: 405 GYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGL 464
Query: 428 DIRTYELLFSLFGNVNAPYEEGNMFSQVDSAKRINAIEMDMARNNIQHSHISMKNLLKAL 487
D T ++ V+ G + ++ K + + A N+ +S+I + + +L
Sbjct: 465 DTVTCNII------VDGLCGSGELDKAIEIVKGMR-VHGSAALGNLGNSYIGLVD--DSL 515
Query: 488 GAEGMIRELIQYFCDSKTPLGTPTYNTVLHSLVEAQESHRAMEIFKQMKTCGIPPNAATY 547
+ +LI TY+T+L+ L +A A +F +M + P++ Y
Sbjct: 516 IENNCLPDLI-------------TYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAY 562
Query: 548 NIMIDCCSIIRCFKSASALVSMMVRDGFYPQTMTYTALIKILLDYGDFDEALNLLDLVSL 607
NI I SA ++ M + G + TY +LI L E L+D +
Sbjct: 563 NIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKE 622
Query: 608 EGIPHDVLLYNTILKKACEKGRIDVIEFIIEQMHQNKVQPDPSTCHFVFSGYVNCGFHNS 667
+GI ++ YNT ++ CE +++ ++++M Q + P+ + ++ + +
Sbjct: 623 KGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDM 682
Query: 668 AMEALQV 674
A E +
Sbjct: 683 AQEVFET 689
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 86/441 (19%), Positives = 173/441 (39%), Gaps = 66/441 (14%)
Query: 294 WSFSDVIHACGRTQNSGLAEQLMLQMQSLGLQPSSHTYD----GFIRAIVSDRGLRNGME 349
++F+ +I A + A +L +M G +P+ T+ G+ +A ++D+GL E
Sbjct: 148 YTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGL----E 203
Query: 350 VLKIMQQNNLKPQDSTIATLSVECSKALELDLAEALLDQISR---CTNPKPFSAFLAACD 406
+L M+ + P T+ + D +E +++++ + F++ ++A
Sbjct: 204 LLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALC 263
Query: 407 TMDKPERAIKIFAKMRQK-----LRPDIRTYELLFSLFGNVNAPYEEGNMFSQVDSAKRI 461
K A +IF+ M RP+ TY L+ F V + +F + +
Sbjct: 264 KEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDL 323
Query: 462 NAIEM--DMARNNIQHSH-ISMKNLLKALGAEGMIRELIQY------------FCDSKTP 506
+++ + ++H I + +LK + +G+ + Y D+KT
Sbjct: 324 ASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTI 383
Query: 507 LG----------TPTYNTVLHSLVEAQESHRAMEIFKQMKTCGIPPNAATYNIMIDCCSI 556
+G TY +LH + A + ++M PNA T NI++
Sbjct: 384 VGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWK 443
Query: 557 IRCFKSASALVSMMVRDGFYPQTMTYTALIKILLDYGDFDEALNLLDLVSLEG------- 609
+ A L+ M G+ T+T ++ L G+ D+A+ ++ + + G
Sbjct: 444 MGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNL 503
Query: 610 -----------------IPHDVLLYNTILKKACEKGRIDVIEFIIEQMHQNKVQPDPSTC 652
+P D++ Y+T+L C+ GR + + +M K+QPD
Sbjct: 504 GNSYIGLVDDSLIENNCLP-DLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAY 562
Query: 653 HFVFSGYVNCGFHNSAMEALQ 673
+ + G +SA L+
Sbjct: 563 NIFIHHFCKQGKISSAFRVLK 583
Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 114/558 (20%), Positives = 213/558 (38%), Gaps = 70/558 (12%)
Query: 121 NNKCYLLMMQALCKGGYLEEASNLIYFLGERYGIYPILPVYNSFLGACAKLHSMVHANLC 180
N+ Y LM++ CK G LE+A L + E + L YN +L + + A
Sbjct: 290 NSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLAS-LQSYNIWLQGLVRHGKFIEAETV 348
Query: 181 LDLMDSRMVGKNEVTYTELL----KLAVWQKNLSAVHEIWEDYIKHYSLSIFSLRKFVWS 236
L M + +G + +Y L+ KL + + V + + + +++ L +
Sbjct: 349 LKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCL---LHG 405
Query: 237 FTRLRDLKSAYETLQHMVALAMMGKLYINRTSEGRLRSSRLDIPIPLNALPVMKVLRWSF 296
+ + + +A LQ M +R+ N LP ++
Sbjct: 406 YCSVGKVDAAKSLLQEM------------------MRN---------NCLPNA----YTC 434
Query: 297 SDVIHACGRTQNSGLAEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRGLRNGMEVLKIMQQ 356
+ ++H+ + AE+L+ +M G + T + + + L +E++K M+
Sbjct: 435 NILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRV 494
Query: 357 NNLKPQDSTIATLSVECSKALELDLAE--ALLDQISRCTNPKPFSAFLAACDTMDKPERA 414
+ + + L ++ L E L D I+ +S L + A
Sbjct: 495 HG----SAALGNLGNSYIGLVDDSLIENNCLPDLIT-------YSTLLNGLCKAGRFAEA 543
Query: 415 IKIFAKM-RQKLRPDIRTYELLFSLFGNVNAPYEEGNMFSQVDSAKRINAIEMDMARNNI 473
+FA+M +KL+PD Y + F ++G ++ SA R+ DM +
Sbjct: 544 KNLFAEMMGEKLQPDSVAYNIFIHHF------CKQG----KISSAFRVLK---DMEKKGC 590
Query: 474 QHSHISMKNLLKALGAEGMIRELIQYFCDSKTPLGTP---TYNTVLHSLVEAQESHRAME 530
S + +L+ LG + I E+ + K +P TYNT + L E ++ A
Sbjct: 591 HKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATN 650
Query: 531 IFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASALVSMMVRDGFYPQTMTYTALIKILL 590
+ +M I PN ++ +I+ + F A + V + + Y+ + LL
Sbjct: 651 LLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGL-YSLMFNELL 709
Query: 591 DYGDFDEALNLLDLVSLEGIPHDVLLYNTILKKACEKGRIDVIEFIIEQMHQNKVQPDPS 650
G +A LL+ V G LY +++ C+K ++V I+ +M DP+
Sbjct: 710 AAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPA 769
Query: 651 TCHFVFSGYVNCGFHNSA 668
V G G A
Sbjct: 770 ALMPVIDGLGKMGNKKEA 787
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 104/477 (21%), Positives = 188/477 (39%), Gaps = 47/477 (9%)
Query: 111 RMMEEKEIGLNNKCYLLMMQALCKGGYLEEASNLIYFLGERYGIYPILPVYNSFL-GACA 169
+ M +K IG + Y ++M LCK G L +A ++ + +R G+ P Y L G C+
Sbjct: 350 KQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLM-KRNGVCPDAVTYGCLLHGYCS 408
Query: 170 KLHSMVHANLCLDLMDSRMVGKNEVTYTELLKLAVWQ-KNLSAVHEIWEDYI-KHYSLSI 227
+L ++M + + N T LL ++W+ +S E+ K Y L
Sbjct: 409 VGKVDAAKSLLQEMMRNNCL-PNAYTCNILLH-SLWKMGRISEAEELLRKMNEKGYGLDT 466
Query: 228 FSLRKFVWSFTRLRDLKSAYETLQHM-----VALAMMGKLYINRTSEGRLRSSRLDIPIP 282
+ V +L A E ++ M AL +G YI + + +
Sbjct: 467 VTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIEN-------- 518
Query: 283 LNALPVMKVLRWSFSDVIHACGRTQNSGLAEQLMLQMQSLGLQPSSHTYDGFIRAIVSDR 342
N LP + ++S +++ + A+ L +M LQP S Y+ FI
Sbjct: 519 -NCLPDL----ITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQG 573
Query: 343 GLRNGMEVLKIMQQN----NLKPQDSTIATLSVECSKALELDLAEALLDQISRCTNPKPF 398
+ + VLK M++ +L+ +S I L ++ ++ E+ L+D++
Sbjct: 574 KISSAFRVLKDMEKKGCHKSLETYNSLILGLGIK-NQIFEI---HGLMDEMKEKGISPNI 629
Query: 399 SAFLAACDTM---DKPERAIKIFAKMRQK-LRPDIRTYELLFSLFGNVNAPYEEGNMFSQ 454
+ A + +K E A + +M QK + P++ +++ L F V
Sbjct: 630 CTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKV----------PD 679
Query: 455 VDSAKRINAIEMDMARNNIQHSHISMKNLLKALGAEGMIRELIQYFCDSKTPLGTPTYNT 514
D A+ + + + + + M N L A G EL++ D LGT Y
Sbjct: 680 FDMAQEVFETAVSICGQK-EGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKD 738
Query: 515 VLHSLVEAQESHRAMEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASALVSMMV 571
++ SL + E A I +M G + A +ID + K A++ M+
Sbjct: 739 LVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANSFADKMM 795
Score = 43.9 bits (102), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/186 (20%), Positives = 75/186 (40%), Gaps = 18/186 (9%)
Query: 512 YNTVLHSLVEAQESHRAMEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASALVSMMV 571
YNT++ S + + ++ ++M+ G+ P+ T+N I AS + S M
Sbjct: 220 YNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDME 279
Query: 572 RDGFY----PQTMTYTALIKILLDYGDFDEALNLL-------DLVSLEGIPHDVLLYNTI 620
D + P ++TY ++K G ++A L DL SL+ YN
Sbjct: 280 LDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQS-------YNIW 332
Query: 621 LKKACEKGRIDVIEFIIEQMHQNKVQPDPSTCHFVFSGYVNCGFHNSAMEALQVLSMRML 680
L+ G+ E +++QM + P + + + G G + A + ++ +
Sbjct: 333 LQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGV 392
Query: 681 CEEVST 686
C + T
Sbjct: 393 CPDAVT 398
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 95/397 (23%), Positives = 164/397 (41%), Gaps = 53/397 (13%)
Query: 296 FSDVIHACGRTQNSGLAEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRGLRNGMEVLKIMQ 355
F+ ++ A + L L QMQ+LG+ +TY FI L + VL M
Sbjct: 86 FNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMM 145
Query: 356 QNNLKPQDSTIATLSVECSKALELDLAEALLDQISRCTNPKP----FSAFLAACDTMDKP 411
+ +P T+++L + + A AL+DQ+ KP F+ + +K
Sbjct: 146 KLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVE-MGYKPDTFTFTTLIHGLFLHNKA 204
Query: 412 ERAIKIFAKMRQK-LRPDIRTYELLFSLFGNVNAPYEEGNMFSQVDSAKRINAIEMDMAR 470
A+ + +M Q+ +PD+ TY + VN + G ++D+A
Sbjct: 205 SEAVALVDQMVQRGCQPDLVTYGTV------VNGLCKRG---------------DIDLAL 243
Query: 471 NNIQHSHISMKNLLKALGAEGMIRELIQYFCDSKTPLGTPTYNTVLHSLVEAQESHRAME 530
N LL + A ++ +NT++ SL + + A++
Sbjct: 244 N-----------LLNKMEA-------------ARIKANVVIFNTIIDSLCKYRHVEVAVD 279
Query: 531 IFKQMKTCGIPPNAATYNIMIDC-CSIIRCFKSASALVSMMVRDGFYPQTMTYTALIKIL 589
+F +M+T GI PN TYN +I+C C+ R + AS L+S M+ P +T+ ALI
Sbjct: 280 LFTEMETKGIRPNVVTYNSLINCLCNYGR-WSDASRLLSNMLEKKINPNVVTFNALIDAF 338
Query: 590 LDYGDFDEALNLLDLVSLEGIPHDVLLYNTILKKACEKGRIDVIEFIIEQMHQNKVQPDP 649
G EA L + + I D + YN ++ C R+D + + + M P+
Sbjct: 339 FKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNI 398
Query: 650 STCHFVFSGYVNCGFHNSAMEALQVLSMRMLCEEVST 686
T + + +G+ C +E + +S R L T
Sbjct: 399 QTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVT 435
Score = 86.3 bits (212), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 84/378 (22%), Positives = 156/378 (41%), Gaps = 28/378 (7%)
Query: 312 AEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRGLRNGMEVLKIMQQNNLKPQDSTIATLSV 371
A L+ QM +G +P + T+ I + + ++ M Q +P T T+
Sbjct: 172 AVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVN 231
Query: 372 ECSKALELDLAEALLDQISRCTNPKPFSAFLAACDTMDK---PERAIKIFAKMRQK-LRP 427
K ++DLA LL+++ F D++ K E A+ +F +M K +RP
Sbjct: 232 GLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRP 291
Query: 428 DIRTYELLFSLFGNVNAPYEEGNMFSQVDSAKRINAIEMDMARNNIQHSHISMKNLLKAL 487
++ TY L + N + + A R+ + +M I + ++ L+ A
Sbjct: 292 NVVTYNSLINCLCN----------YGRWSDASRLLS---NMLEKKINPNVVTFNALIDAF 338
Query: 488 GAEGMI-------RELIQYFCDSKTPLGTPTYNTVLHSLVEAQESHRAMEIFKQMKTCGI 540
EG + E+IQ D T TYN +++ A ++FK M +
Sbjct: 339 FKEGKLVEAEKLHEEMIQRSIDPDTI----TYNLLINGFCMHNRLDEAKQMFKFMVSKDC 394
Query: 541 PPNAATYNIMIDCCSIIRCFKSASALVSMMVRDGFYPQTMTYTALIKILLDYGDFDEALN 600
PN TYN +I+ + + L M + G T+TYT +I+ GD D A
Sbjct: 395 LPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQM 454
Query: 601 LLDLVSLEGIPHDVLLYNTILKKACEKGRIDVIEFIIEQMHQNKVQPDPSTCHFVFSGYV 660
+ + +P D++ Y+ +L C G++D I + + +++++ + + + G
Sbjct: 455 VFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMC 514
Query: 661 NCGFHNSAMEALQVLSMR 678
G A + LS++
Sbjct: 515 KAGKVGEAWDLFCSLSIK 532
Score = 60.8 bits (146), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 95/216 (43%), Gaps = 7/216 (3%)
Query: 439 FGNVNAPYEEGNMFSQVDSAKRINAIEM--DMARNNIQHSHISMKNLLKALGAEGMIREL 496
F + + Y E D K +A+++ DM ++ S + LL A+ EL
Sbjct: 43 FASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKF-EL 101
Query: 497 IQYFCDSKTPLGTP----TYNTVLHSLVEAQESHRAMEIFKQMKTCGIPPNAATYNIMID 552
+ + LG TY+ ++ + A+ + +M G P+ T + +++
Sbjct: 102 VISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLN 161
Query: 553 CCSIIRCFKSASALVSMMVRDGFYPQTMTYTALIKILLDYGDFDEALNLLDLVSLEGIPH 612
+ A ALV MV G+ P T T+T LI L + EA+ L+D + G
Sbjct: 162 GYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQP 221
Query: 613 DVLLYNTILKKACEKGRIDVIEFIIEQMHQNKVQPD 648
D++ Y T++ C++G ID+ ++ +M +++ +
Sbjct: 222 DLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKAN 257
Score = 59.7 bits (143), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 82/393 (20%), Positives = 166/393 (42%), Gaps = 30/393 (7%)
Query: 276 RLDIPIPLNALPVMKVLRWS-----FSDVIHACGRTQNSGLAEQLMLQMQSLGLQPSSHT 330
R DI + LN L M+ R F+ +I + + ++ +A L +M++ G++P+ T
Sbjct: 236 RGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVT 295
Query: 331 YDGFIRAIVSDRGLRNGMEVLKIMQQNNLKPQDSTIATLSVECSKALELDLAEALLDQ-I 389
Y+ I + + + +L M + + P T L K +L AE L ++ I
Sbjct: 296 YNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMI 355
Query: 390 SRCTNPKP--FSAFLAACDTMDKPERAIKIFAKMRQK-LRPDIRTYELLFSLFGNVNAPY 446
R +P ++ + ++ + A ++F M K P+I+TY L + F
Sbjct: 356 QRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVE 415
Query: 447 EEGNMFSQVDSAKRINAIEMDMARNNIQHSHISMKNLLKALGAEGMIRELIQYFCDSKTP 506
+ +F ++ + + N + ++ I ++ +A G + + + ++ P
Sbjct: 416 DGVELFREMS--------QRGLVGNTVTYTTI-IQGFFQA-GDCDSAQMVFKQMVSNRVP 465
Query: 507 LGTPTYNTVLHSLVEAQESHRAMEIFKQMKTCGIPPNAATYNIMID-CCSIIRCFKSASA 565
TY+ +LH L + A+ IFK ++ + N YN MI+ C + ++
Sbjct: 466 TDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDL 525
Query: 566 LVSMMVRDGFYPQTMTYTALIKILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILK--- 622
S+ ++ P +TY +I L EA +L + +G + YNT+++
Sbjct: 526 FCSLSIK----PDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANL 581
Query: 623 KACEKGRIDVIEFIIEQMHQNKVQPDPSTCHFV 655
+ C++ +I++M + D ST V
Sbjct: 582 RDCDRA---ASAELIKEMRSSGFVGDASTISLV 611
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 125/297 (42%), Gaps = 21/297 (7%)
Query: 312 AEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRGLRNGMEVLKIMQQNNLKPQDSTIATLSV 371
AE+L +M + P + TY+ I L ++ K M + P T TL
Sbjct: 347 AEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLIN 406
Query: 372 ECSKALELDLAEALLDQISR---CTNPKPFSAFLAACDTMDKPERAIKIFAKMRQKLRP- 427
K ++ L ++S+ N ++ + + A +F +M P
Sbjct: 407 GFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPT 466
Query: 428 DIRTYELLFSLFGNVNAPYEEGNMFSQVDSAKRINAIEMDMARNNIQHSHISMKNLLKAL 487
DI TY +L ++ G + + + K + EM++ NI + ++ + KA
Sbjct: 467 DIMTYSIL------LHGLCSYGKLDTALVIFKYLQKSEMEL---NIFIYNTMIEGMCKA- 516
Query: 488 GAEGMIRELIQYFCDSKTPLGTPTYNTVLHSLVEAQESHRAMEIFKQMKTCGIPPNAATY 547
G + E FC TYNT++ L + A ++F++MK G PN+ TY
Sbjct: 517 ---GKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTY 573
Query: 548 NIMIDCCSIIRCFKSASA-LVSMMVRDGFYPQTMTYTALIKILLDYGDFDEA-LNLL 602
N +I ++ C ++ASA L+ M GF T + + +L D G D++ LN+L
Sbjct: 574 NTLIR-ANLRDCDRAASAELIKEMRSSGFVGDASTISLVTNMLHD-GRLDKSFLNML 628
Score = 36.2 bits (82), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/97 (20%), Positives = 45/97 (46%)
Query: 563 ASALVSMMVRDGFYPQTMTYTALIKILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILK 622
A L MV+ +P + + L+ + F+ ++L + + GI HD+ Y+ +
Sbjct: 67 AVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFIN 126
Query: 623 KACEKGRIDVIEFIIEQMHQNKVQPDPSTCHFVFSGY 659
C + ++ + ++ +M + +PD T + +GY
Sbjct: 127 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGY 163
>sp|Q9LSK8|PP240_ARATH Pentatricopeptide repeat-containing protein At3g18020
OS=Arabidopsis thaliana GN=At3g18020 PE=2 SV=1
Length = 688
Score = 91.3 bits (225), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 110/529 (20%), Positives = 219/529 (41%), Gaps = 42/529 (7%)
Query: 147 FLGERYGIYPILPVYNSFLGACAKLHSMVHANLCLDLMDSRMVGKNEVTYTELLKLAVWQ 206
+G + P L YN + ++ ++ A+ + M +R + VT+T L+
Sbjct: 151 LIGFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEI 210
Query: 207 KNLSAVHEIWEDY----IKHYSLSIFSLRKFVWSFTRLRD-------LKSAYETLQHMVA 255
+ L H+++++ I+ SL++ L + F ++RD +K +E +++
Sbjct: 211 RELEVAHKVFDEMRVCGIRPNSLTLSVL---IGGFLKMRDVETGRKLMKELWEYMKNETD 267
Query: 256 LAMMGKLYINRTS----EGRLRSSRLDIPIPLNALPVMKVLRWSFSDVIHACGRTQNSGL 311
+M + N EG + +I ++ + V +++ +I + R + +
Sbjct: 268 TSMKAAAFANLVDSMCREGYF-NDIFEIAENMSLCESVNV-EFAYGHMIDSLCRYRRNHG 325
Query: 312 AEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRGLRNGMEVLKIMQQNNLKPQDSTIATLSV 371
A +++ M+S GL+P +Y+ I + D G ++L+ + P + T L
Sbjct: 326 AARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLME 385
Query: 372 ECSKALELDLAEALLDQISR---CTNPKPFSAFLAACDTMDKPERAIKIFAKMRQ-KLRP 427
K L+ A +L+ + R + ++ +L MD P + + M Q RP
Sbjct: 386 SLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRP 445
Query: 428 DIRTYELLFSLFGNVNAPYEEGNMFSQVDSAKRINAIEMDMARNNIQHSHISMKNLLKAL 487
D ++L +N + G +VD A ++ ++ M +++ ++ L
Sbjct: 446 D------EYTLNTVINGLCKMG----RVDDAMKV--LDDMMTGKFCAPDAVTLNTVMCGL 493
Query: 488 GAEGMIRE----LIQYFCDSKTPLGTPTYNTVLHSLVEAQESHRAMEIFKQMKTCGIPPN 543
A+G E L + ++K G YN V+ L + + AM +F Q++ + +
Sbjct: 494 LAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTAD 553
Query: 544 AATYNIMIDCCSIIRCFKSASALVSMMVRDGFYPQTMTYTALIKILLDYGDFDEALNLL- 602
+ TY I+ID + A ++ Y A +K L G +A + L
Sbjct: 554 STTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLY 613
Query: 603 DLVSLEGIPHDVLLYNTILKKACEKGRIDVIEFIIEQMHQNKVQPDPST 651
DL IP +V+ YNT++ + G I+E+M +N PD T
Sbjct: 614 DLADSGAIP-NVVCYNTVIAECSRSGLKREAYQILEEMRKNGQAPDAVT 661
Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/320 (22%), Positives = 129/320 (40%), Gaps = 24/320 (7%)
Query: 373 CSKALELDLAEALLDQISRCTNPK--PFSAFLAACDTMDKPERAIKIFAKMRQ-KLRPDI 429
C+ +D + + D +R P F+ + + + E A K+F +MR +RP+
Sbjct: 173 CTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNS 232
Query: 430 RTYELLFSLFGNVNAPYEEGNMFSQVDSAKRINAIEMDMARNNIQHS--HISMKNLLKAL 487
T +L F + V++ +++ + +N S + NL+ ++
Sbjct: 233 LTLSVLIGGFLKMR----------DVETGRKLMKELWEYMKNETDTSMKAAAFANLVDSM 282
Query: 488 GAEGMIRELIQY-----FCDSKTPLGTPTYNTVLHSLVEAQESHRAMEIFKQMKTCGIPP 542
EG ++ + C+S Y ++ SL + +H A I MK+ G+ P
Sbjct: 283 CREGYFNDIFEIAENMSLCESVNV--EFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLKP 340
Query: 543 NAATYNIMI-DCCSIIRCFKSASALVSMMVRDGFYPQTMTYTALIKILLDYGDFDEALNL 601
+YN +I C C + A L+ F+P TY L++ L D +A N+
Sbjct: 341 RRTSYNAIIHGLCKDGGCMR-AYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNV 399
Query: 602 LDLVSLEGIPHDVLLYNTILKKACEKGRIDVIEFIIEQMHQNKVQPDPSTCHFVFSGYVN 661
L+L+ + +YN L+ C I ++ M Q +PD T + V +G
Sbjct: 400 LELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCK 459
Query: 662 CGFHNSAMEALQVLSMRMLC 681
G + AM+ L + C
Sbjct: 460 MGRVDDAMKVLDDMMTGKFC 479
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 98/525 (18%), Positives = 191/525 (36%), Gaps = 82/525 (15%)
Query: 125 YLLMMQALCKGGYLEEASNLIYFLGERYGIYPILPVYNSFLGACAKLHSMVHANLCLDLM 184
Y +M LC + +A L++ + R G P + + + +G ++ + A+ D M
Sbjct: 165 YNRLMNQLCTIYRVIDAHKLVFDMRNR-GHLPDVVTFTTLIGGYCEIRELEVAHKVFDEM 223
Query: 185 DSRMVGKNEVTYTEL----LKLAVWQKNLSAVHEIWEDYIKH---YSLSIFSLRKFVWSF 237
+ N +T + L LK+ + + E+WE Y+K+ S+ + V S
Sbjct: 224 RVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWE-YMKNETDTSMKAAAFANLVDSM 282
Query: 238 TRLRDLKSAYETLQHM-------VALA---MMGKLYINRTSEGRLRSSRLDIPIPLNALP 287
R +E ++M V A M+ L R + G R + +
Sbjct: 283 CREGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARI------VYIMKSK 336
Query: 288 VMKVLRWSFSDVIHACGRTQNSGLAEQLMLQMQSLGLQPSSHTYDGFIRAIVSD------ 341
+K R S++ +IH + A QL+ + PS +TY + ++ +
Sbjct: 337 GLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKA 396
Query: 342 -----------------------RGL---RNGMEVLKI---MQQNNLKPQDSTIATLSVE 372
RGL N E+L + M Q + +P + T+ T+
Sbjct: 397 RNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVING 456
Query: 373 CSKALELDLAEALLDQI--SRCTNPKPFSAFLAACDTM--DKPERAIKIFAKM--RQKLR 426
K +D A +LD + + P + C + + E A+ + ++ K++
Sbjct: 457 LCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIK 516
Query: 427 PDIRTYELLFSLFGNVNAPYEEGNMFSQVDSAKRINAIEMDMARNNIQHSHISMKNLLKA 486
P + Y + ++ E ++F Q++ A ++ + ++
Sbjct: 517 PGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKA-------------SVTADSTTYAIIIDG 563
Query: 487 LGAEGMIRELIQYFCDSKTPLGTP---TYNTVLHSLVEAQESHRAMEIFKQMKTCGIPPN 543
L + +++ D P G Y L L ++ A + G PN
Sbjct: 564 LCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPN 623
Query: 544 AATYNIMIDCCSIIRCFKSASALVSMMVRDGFYPQTMTYTALIKI 588
YN +I CS + A ++ M ++G P +T+ L K+
Sbjct: 624 VVCYNTVIAECSRSGLKREAYQILEEMRKNGQAPDAVTWRILDKL 668
Score = 33.1 bits (74), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 29/62 (46%)
Query: 596 DEALNLLDLVSLEGIPHDVLLYNTILKKACEKGRIDVIEFIIEQMHQNKVQPDPSTCHFV 655
DEAL +LD + L G D L ++++ C+ GR D + PD TC+ +
Sbjct: 72 DEALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVI 131
Query: 656 FS 657
+
Sbjct: 132 IA 133
>sp|Q9LW84|PP236_ARATH Pentatricopeptide repeat-containing protein At3g16010
OS=Arabidopsis thaliana GN=At3g16010 PE=2 SV=1
Length = 642
Score = 90.9 bits (224), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 91/424 (21%), Positives = 167/424 (39%), Gaps = 57/424 (13%)
Query: 296 FSDVIHACGRTQNSGLAEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRGLRNGMEVLKIM- 354
S+++ A GR + A + Q + +P+S TY+ I ++ + EV M
Sbjct: 165 LSELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMC 224
Query: 355 QQNNLKPQDSTIATLSVECSKALELDLAEALLDQIS-RCTNP--KPFSAFLAACDTMDKP 411
+ + P T + L K D A L D++ C P K ++ L + K
Sbjct: 225 NEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKV 284
Query: 412 ERAIKIFAKM-RQKLRPDIRTYELLFSLFGNVNAPYEEGNMFSQVDSAKRINAIEMDMAR 470
E+A+ +F +M R P + TY L G +VD A DM R
Sbjct: 285 EKALDLFEEMKRAGCSPTVYTYTELIKGLGKA----------GRVDEAY---GFYKDMLR 331
Query: 471 NNIQHSHISMKNLLKALGAEGMIRELIQYFCDSKTPLGTPT---YNTVLHSLVEAQ---- 523
+ + + + NL+ LG G + EL F + TPT YNTV+ +L E++
Sbjct: 332 DGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVS 391
Query: 524 --------------------------------ESHRAMEIFKQMKTCGIPPNAATYNIMI 551
+A+ + ++M G PP A Y +I
Sbjct: 392 EVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLI 451
Query: 552 DCCSIIRCFKSASALVSMMVRDGFYPQTMTYTALIKILLDYGDFDEALNLLDLVSLEGIP 611
+ + +++A+ L + + + Y +IK G EA++L + + +G
Sbjct: 452 NALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSG 511
Query: 612 HDVLLYNTILKKACEKGRIDVIEFIIEQMHQNKVQPDPSTCHFVFSGYVNCGFHNSAMEA 671
DV YN ++ + G I+ ++ +M +N + D ++ + + +G+ G A+E
Sbjct: 512 PDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEM 571
Query: 672 LQVL 675
+ +
Sbjct: 572 FETI 575
Score = 60.1 bits (144), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 84/187 (44%), Gaps = 5/187 (2%)
Query: 467 DMARNN-IQHSHISMKNLLKALGAEGMIRELIQYFCDSKTPLGTP---TYNTVLHSLVEA 522
++ RN + S + L+KALG M+ + + F +K P TYN+V+ L++
Sbjct: 151 EVVRNTYVSVSPAVLSELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQE 210
Query: 523 QESHRAMEIFKQMKTCG-IPPNAATYNIMIDCCSIIRCFKSASALVSMMVRDGFYPQTMT 581
+ + E++ +M G P+ TY+ +I + SA L M + P
Sbjct: 211 GQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKI 270
Query: 582 YTALIKILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILKKACEKGRIDVIEFIIEQMH 641
YT L+ I G ++AL+L + + G V Y ++K + GR+D + M
Sbjct: 271 YTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDML 330
Query: 642 QNKVQPD 648
++ + PD
Sbjct: 331 RDGLTPD 337
Score = 60.1 bits (144), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/288 (20%), Positives = 128/288 (44%), Gaps = 24/288 (8%)
Query: 310 GLAEQLMLQMQSLGL---QPSSHTYDGFIRAIVSDRG-LRNGMEVLKIMQQNNLKPQDST 365
G E+L +G+ P+ +Y+ I+A+ + + M+ +++ P + T
Sbjct: 352 GRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFT 411
Query: 366 IATLSVECSKALELDLAEALLDQISRCTNPKPFSAFLAACDTMDKPER---AIKIFAKMR 422
+ L K ++ A LL+++ P +A+ + + + K +R A ++F +++
Sbjct: 412 YSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELK 471
Query: 423 QKL-RPDIRTYELLFSLFGNVNAPYEEGNMFSQVDSAKRINAIEMDMARNNIQHSHISMK 481
+ R Y ++ FG E ++F N ++ + ++ + M
Sbjct: 472 ENFGNVSSRVYAVMIKHFGKCGKLSEAVDLF---------NEMKNQGSGPDVYAYNALMS 522
Query: 482 NLLKALGAEGMIRE---LIQYFCDSKTPLGTPTYNTVLHSLVEAQESHRAMEIFKQMKTC 538
++KA GMI E L++ ++ ++N +L+ RA+E+F+ +K
Sbjct: 523 GMVKA----GMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHS 578
Query: 539 GIPPNAATYNIMIDCCSIIRCFKSASALVSMMVRDGFYPQTMTYTALI 586
GI P+ TYN ++ C + F+ A+ ++ M GF +TY++++
Sbjct: 579 GIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSIL 626
Score = 47.4 bits (111), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 98/243 (40%), Gaps = 22/243 (9%)
Query: 318 QMQSLGLQPSSHTYDGFIRAIVSDRGLRNGMEVLKIMQQNNLKPQDSTIATLSVECSKAL 377
+M++ + PS TY I + + +L+ M + P + +L KA
Sbjct: 399 KMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAK 458
Query: 378 ELDLAEALLDQISRC---TNPKPFSAFLAACDTMDKPERAIKIFAKMR-QKLRPDIRTYE 433
+ A L ++ + + ++ + K A+ +F +M+ Q PD+ Y
Sbjct: 459 RYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYN 518
Query: 434 LLFSLFGNVNAPYEEGNMFSQVDSAKRINAIEMDMARNNIQHSHISMKNLLKALGAEGMI 493
L S G V A M ++ +S R +E + R +I +I +L G+
Sbjct: 519 ALMS--GMVKA-----GMINEANSLLR--KMEENGCRADINSHNI----ILNGFARTGVP 565
Query: 494 RELIQYFCDSK----TPLGTPTYNTVLHSLVEAQESHRAMEIFKQMKTCGIPPNAATYNI 549
R I+ F K P G TYNT+L A A + ++MK G +A TY+
Sbjct: 566 RRAIEMFETIKHSGIKPDGV-TYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSS 624
Query: 550 MID 552
++D
Sbjct: 625 ILD 627
>sp|Q9SZ52|PP344_ARATH Pentatricopeptide repeat-containing protein At4g31850,
chloroplastic OS=Arabidopsis thaliana GN=PGR3 PE=1 SV=1
Length = 1112
Score = 90.9 bits (224), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 115/501 (22%), Positives = 194/501 (38%), Gaps = 30/501 (5%)
Query: 169 AKLHSMVHANLCLDLMDSRMVGKNEVTYTELLK-LAVWQKNLSAVHEIWEDYIKHYSLSI 227
KL M + DLM R++ ++ TY + K L+V A + + + + L+
Sbjct: 132 GKLEEMAYV---FDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNA 188
Query: 228 FSLRKFVWSFTRLRDLKSAYETLQHMVALAMMGKLYINRTSEGRLRSSRLDIPIPLNALP 287
+S + + R A E + M+ L + L R DI + L
Sbjct: 189 YSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGL-GKRRDIDSVMGLLK 247
Query: 288 VMKVLR-----WSFSDVIHACGRTQNSGLAEQLMLQMQSLGLQPSSHTYDGFIRAIVSDR 342
M+ L ++F+ I GR A +++ +M G P TY I A+ + R
Sbjct: 248 EMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTAR 307
Query: 343 GLRNGMEVLKIMQQNNLKPQDSTIATLSVECSKALELDLAEALLDQISRCTNPKPFSAFL 402
L EV + M+ KP T TL S +LD + ++ + + F
Sbjct: 308 KLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFT 367
Query: 403 AACDTMDKPE---RAIKIFAKMR-QKLRPDIRTYELLFSLFGNVNAPYEEGNMFSQVDSA 458
D + K A MR Q + P++ TY L V+ + +F ++S
Sbjct: 368 ILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMES- 426
Query: 459 KRINAIEMDMARNNIQHSHISMKNLLKALGAEGMIRELIQYFCDSKTPLGTPTY---NTV 515
+ +++I + G G ++ F KT P N
Sbjct: 427 ---------LGVKPTAYTYIV---FIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNAS 474
Query: 516 LHSLVEAQESHRAMEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASALVSMMVRDGF 575
L+SL +A A +IF +K G+ P++ TYN+M+ C S + A L+S M+ +G
Sbjct: 475 LYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGC 534
Query: 576 YPQTMTYTALIKILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILKKACEKGRIDVIEF 635
P + +LI L DEA + + + V+ YNT+L + G+I
Sbjct: 535 EPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIE 594
Query: 636 IIEQMHQNKVQPDPSTCHFVF 656
+ E M Q P+ T + +F
Sbjct: 595 LFEGMVQKGCPPNTITFNTLF 615
Score = 85.5 bits (210), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 139/666 (20%), Positives = 270/666 (40%), Gaps = 65/666 (9%)
Query: 54 ATQMQIVDALCRGER-SRASHLLLNLGHAHHSLGADDFFHILNYCARSPDPLFVMETWRM 112
T ++DALC + A + + H + +L+ + + D V + W
Sbjct: 294 VTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSE 353
Query: 113 MEEKEIGLNNKCYLLMMQALCKGGYLEEASNLIYFLGERYGIYPILPVYNSFLGACAKLH 172
ME+ + + +++ ALCK G EA + + + ++ GI P L YN+ + ++H
Sbjct: 354 MEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQ-GILPNLHTYNTLICGLLRVH 412
Query: 173 SMVHANLCLDLMDSRMVGKNEVTYTELLKLAVWQK---NLSAVHEIWEDYIKHYSLSIFS 229
+ A M+S +G YT ++ + + K ++SA+ + K + +I +
Sbjct: 413 RLDDALELFGNMES--LGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVA 470
Query: 230 LRKFVWSFT---RLRDLKSAYETLQHM------VALAMMGKLY--INRTSEG-RLRSSRL 277
++S R R+ K + L+ + V MM K Y + E +L S +
Sbjct: 471 CNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMM 530
Query: 278 DIPIPLNALPVMKVLRWSFSDVIHACGRTQNSGLAEQLMLQMQSLGLQPSSHTYDGFIRA 337
+ N ++ S + ++ R A ++ ++M+ + L+P+ TY+ +
Sbjct: 531 E-----NGCEPDVIVVNSLINTLYKADRVDE---AWKMFMRMKEMKLKPTVVTYNTLLAG 582
Query: 338 IVSDRGLRNGMEVLKIMQQNNLKPQDSTIATLSVECSKALELDLA-EALLDQISRCTNPK 396
+ + ++ +E+ + M Q P T TL K E+ LA + L + P
Sbjct: 583 LGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPD 642
Query: 397 PFS--AFLAACDTMDKPERAIKIFAKMRQKLRPDIRTYELLFSLFGNVNAPYEEGN---- 450
F+ + + + A+ F +M++ + PD T L L G V A E
Sbjct: 643 VFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVT--LCTLLPGVVKASLIEDAYKII 700
Query: 451 ---MFSQVDSAKRI---NAIEMDMARNNIQHSHISMKNLLKALG----AEGMIRELIQYF 500
+++ D + + I +A I ++ +S L A G + ++ +I+Y
Sbjct: 701 TNFLYNCADQPANLFWEDLIGSILAEAGIDNA-VSFSERLVANGICRDGDSILVPIIRYS 759
Query: 501 CDSKTPLGT-----------------PTYNTVLHSLVEAQESHRAMEIFKQMKTCGIPPN 543
C G PTYN ++ L+EA A ++F Q+K+ G P+
Sbjct: 760 CKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPD 819
Query: 544 AATYNIMIDCCSIIRCFKSASALVSMMVRDGFYPQTMTYTALIKILLDYGDFDEALNL-L 602
ATYN ++D L M T+T+ +I L+ G+ D+AL+L
Sbjct: 820 VATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYY 879
Query: 603 DLVSLEGIPHDVLLYNTILKKACEKGRIDVIEFIIEQMHQNKVQPDPSTCHFVFSGYVNC 662
DL+S Y ++ + GR+ + + E M +P+ + + + +G+
Sbjct: 880 DLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKA 939
Query: 663 GFHNSA 668
G ++A
Sbjct: 940 GEADAA 945
Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 94/420 (22%), Positives = 176/420 (41%), Gaps = 51/420 (12%)
Query: 294 WSFSDVIHACGRTQNSGLAEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRGLRNGMEVLKI 353
+S++ +IH +++ A ++ +M G +PS TY + + R + + M +LK
Sbjct: 189 YSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKE 248
Query: 354 MQQNNLKPQDSTIATLSVECSKALELDLAEALLDQIS-RCTNPK--PFSAFLAACDTMDK 410
M+ LKP T +A +++ A +L ++ P ++ + A T K
Sbjct: 249 METLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARK 308
Query: 411 PERAIKIFAKMRQ-KLRPDIRTYELLFSLFGNVNAPYEEGNMFSQVDSAKRI-NAIEMDM 468
+ A ++F KM+ + +PD TY L F + +DS K+ + +E D
Sbjct: 309 LDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNR----------DLDSVKQFWSEMEKDG 358
Query: 469 ARNNIQHSHISMKNLLKALGAEGMIRELIQYFCDSKTPLGTPTYNTVLHSLVEAQESHRA 528
++ I + L KA G G + + D TYNT++ L+ A
Sbjct: 359 HVPDVVTFTILVDALCKA-GNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDA 417
Query: 529 MEIFKQMKTCGIPPNAATYNIMID-----------------------CCSIIRCFKSASA 565
+E+F M++ G+ P A TY + ID +I+ C S +
Sbjct: 418 LELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYS 477
Query: 566 L-----------VSMMVRD-GFYPQTMTYTALIKILLDYGDFDEALNLLDLVSLEGIPHD 613
L + ++D G P ++TY ++K G+ DEA+ LL + G D
Sbjct: 478 LAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPD 537
Query: 614 VLLYNTILKKACEKGRIDVIEFIIEQMHQNKVQPDPSTCHFVFSGYVNCGFHNSAMEALQ 673
V++ N+++ + R+D + +M + K++P T + + +G G A+E +
Sbjct: 538 VIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFE 597
Score = 72.8 bits (177), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 119/275 (43%), Gaps = 17/275 (6%)
Query: 414 AIKIFAKM-RQKLRPDIRTYELLFSLFGNVNAPYEEGNMFSQVDSAKRINAIEMDMARNN 472
A++++ +M + RP ++TY L G +DS + + +M
Sbjct: 207 AMEVYRRMILEGFRPSLQTYSSLMVGLGKRR----------DIDS---VMGLLKEMETLG 253
Query: 473 IQHSHISMKNLLKALGAEGMIRE---LIQYFCDSKTPLGTPTYNTVLHSLVEAQESHRAM 529
++ + + ++ LG G I E +++ D TY ++ +L A++ A
Sbjct: 254 LKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAK 313
Query: 530 EIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASALVSMMVRDGFYPQTMTYTALIKIL 589
E+F++MKT P+ TY ++D S R S S M +DG P +T+T L+ L
Sbjct: 314 EVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDAL 373
Query: 590 LDYGDFDEALNLLDLVSLEGIPHDVLLYNTILKKACEKGRIDVIEFIIEQMHQNKVQPDP 649
G+F EA + LD++ +GI ++ YNT++ R+D + M V+P
Sbjct: 374 CKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTA 433
Query: 650 STCHFVFSGYVNCGFHNSAMEALQVLSMRMLCEEV 684
T Y G SA+E + + + + +
Sbjct: 434 YTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNI 468
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 80/372 (21%), Positives = 146/372 (39%), Gaps = 29/372 (7%)
Query: 318 QMQSLGLQPSSHTYDGFIRAIVSDRGLRNGMEVLKIMQQNNLKPQDSTIATLSVECSKAL 377
+M+ G ++++Y+G I ++ R MEV + M +P T ++L V K
Sbjct: 178 KMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRR 237
Query: 378 ELDLAEALLDQISRCT---NPKPFSAFLAACDTMDKPERAIKIFAKMR-QKLRPDIRTYE 433
++D LL ++ N F+ + K A +I +M + PD+ TY
Sbjct: 238 DIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYT 297
Query: 434 LLFSLFGNVNAPYEEGNMFSQVDSAK----RINAIEMDMARNNIQHSHISMKNLLKALGA 489
+L +F ++ + + R+ I + + R + S+K +
Sbjct: 298 VLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITL-LDRFSDNRDLDSVKQFWSEMEK 356
Query: 490 EGMIRELIQYFCDSKTPLGTPTYNTVLHSLVEAQESHRAMEIFKQMKTCGIPPNAATYNI 549
+G + +++ T+ ++ +L +A A + M+ GI PN TYN
Sbjct: 357 DGHVPDVV-------------TFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNT 403
Query: 550 MIDCCSIIRCFK--SASALVSMMVRDGFYPQTMTYTALIKILLDYGDFDEALNLLDLVSL 607
+I C ++R + A L M G P TY I GD AL + +
Sbjct: 404 LI--CGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKT 461
Query: 608 EGIPHDVLLYNTILKKACEKGRIDVIEFIIEQMHQNKVQPDPSTCHFVFSGYVNCGFHNS 667
+GI +++ N L + GR + I + + PD T + + Y G
Sbjct: 462 KGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVG---E 518
Query: 668 AMEALQVLSMRM 679
EA+++LS M
Sbjct: 519 IDEAIKLLSEMM 530
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 122/583 (20%), Positives = 235/583 (40%), Gaps = 60/583 (10%)
Query: 106 VMETWRMMEEKEIGLNNKCYLLMMQALCKGGYLEEASNLIYFLGERYGIYPILPVYNSFL 165
VM + ME + N + + ++ L + G + EA ++ + + G P + Y +
Sbjct: 242 VMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDE-GCGPDVVTYTVLI 300
Query: 166 GACAKLHSMVHANLCLDLMDSRMVGKNEVTYTELLKLAVWQKNLSAVHEIWEDYIKHYSL 225
A + A + M + + VTY LL ++L +V + W + K +
Sbjct: 301 DALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHV 360
Query: 226 -SIFSLRKFVWSFTRLRDLKSAYETLQHMVALAMMGKLYI-NRTSEGRLRSSRLDIPIPL 283
+ + V + + + A++TL M ++ L+ N G LR RLD + L
Sbjct: 361 PDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEL 420
Query: 284 ----NALPVMKVLRWSFSDVIHACGRTQNSGLAEQLMLQMQSLGLQPSSHTYDGFIRAIV 339
+L V K +++ I G++ +S A + +M++ G+ P+ + + ++
Sbjct: 421 FGNMESLGV-KPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLA 479
Query: 340 SDRGLRNGMEVLKIMQQNNLKPQDSTIATLSVEC-SKALELDLAEALLDQISRCTNPKPF 398
R ++ ++ L P DS + ++C SK E+D A LL ++
Sbjct: 480 KAGRDREAKQIFYGLKDIGLVP-DSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDV 538
Query: 399 SAFLAACDTMDKPER---AIKIFAKMRQ-KLRPDIRTYELLFSLFGNVNAPYEEGNMF-S 453
+ +T+ K +R A K+F +M++ KL+P + TY L + G E +F
Sbjct: 539 IVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEG 598
Query: 454 QVDSAKRINAIEMD-----MARNNIQHSHISMKNLLKALGAEGMIRELIQYFCDSKTPLG 508
V N I + + +N+ +++K L K + G + ++
Sbjct: 599 MVQKGCPPNTITFNTLFDCLCKND--EVTLALKMLFKMMDM-GCVPDVF----------- 644
Query: 509 TPTYNTVLHSLVEAQESHRAMEIFKQMKT---------CGIPPNAATYNIMIDCCSIIRC 559
TYNT++ LV+ + AM F QMK C + P +++ D II
Sbjct: 645 --TYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITN 702
Query: 560 FKSASALVSMMVRDGFYPQTMTYTALIKILLDYGDFDEALNLLDLVSLEGIPHD---VLL 616
F A P + + LI +L D A++ + + GI D +L+
Sbjct: 703 FLYNCA---------DQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILV 753
Query: 617 YNTILKKACEKGRIDVIEFIIEQMHQN-KVQPDPSTCHFVFSG 658
I++ +C+ + + E+ ++ VQP T + + G
Sbjct: 754 --PIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGG 794
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/398 (18%), Positives = 156/398 (39%), Gaps = 33/398 (8%)
Query: 325 QPSSHTYDGFIRAIVSDRGLRNGMEVLKIMQQNNL-KPQDSTIATLSVECSKALELDLAE 383
QP++ ++ I +I+++ G+ N + + + N + + DS + + K + A
Sbjct: 710 QPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGAR 769
Query: 384 ALLDQISRCTNPKP----FSAFLAACDTMDKPERAIKIFAKMRQK-LRPDIRTYELLFSL 438
L ++ ++ +P ++ + D E A +F +++ PD+ TY L
Sbjct: 770 TLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDA 829
Query: 439 FGNVNAPYEEGNMFSQVDS--------------AKRINAIEMD---------MARNNIQH 475
+G E ++ ++ + + + A +D M+ +
Sbjct: 830 YGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSP 889
Query: 476 SHISMKNLLKALGAEGMIRELIQYF---CDSKTPLGTPTYNTVLHSLVEAQESHRAMEIF 532
+ + L+ L G + E Q F D YN +++ +A E+ A +F
Sbjct: 890 TACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALF 949
Query: 533 KQMKTCGIPPNAATYNIMIDCCSIIRCFKSASALVSMMVRDGFYPQTMTYTALIKILLDY 592
K+M G+ P+ TY++++DC ++ + G P + Y +I L
Sbjct: 950 KRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKS 1009
Query: 593 GDFDEALNLL-DLVSLEGIPHDVLLYNTILKKACEKGRIDVIEFIIEQMHQNKVQPDPST 651
+EAL L ++ + GI D+ YN+++ G ++ I ++ + ++P+ T
Sbjct: 1010 HRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFT 1069
Query: 652 CHFVFSGYVNCGFHNSAMEALQVLSMRMLCEEVSTLEE 689
+ + GY G A Q + T E+
Sbjct: 1070 FNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQ 1107
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 133/301 (44%), Gaps = 24/301 (7%)
Query: 295 SFSDVIHACGRTQNSGLAEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRGLRNGMEVL-KI 353
+++ ++ A G++ +L +M + + ++ T++ I +V + + +++ +
Sbjct: 822 TYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDL 881
Query: 354 MQQNNLKPQDSTIATLSVECSKALEL----DLAEALLDQISRCTNPKPFSAFLAACDTMD 409
M + P T L SK+ L L E +LD R N ++ +
Sbjct: 882 MSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCR-PNCAIYNILINGFGKAG 940
Query: 410 KPERAIKIFAKM-RQKLRPDIRTYELLFSLFGNVNAPYEEGNMFSQVDSAKRINAIEMDM 468
+ + A +F +M ++ +RPD++TY +L V E + F ++ + + D+
Sbjct: 941 EADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKES----GLNPDV 996
Query: 469 ARNNIQHSHISMKNLLKALGAEGMIRELIQYFCDSKTPLG-TP---TYNTVLHSLVEAQE 524
N+ ++ LG + E + F + KT G TP TYN+++ +L A
Sbjct: 997 VCYNL---------IINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGM 1047
Query: 525 SHRAMEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASALVSMMVRDGFYPQTMTYTA 584
A +I+ +++ G+ PN T+N +I S+ + A A+ MV GF P T TY
Sbjct: 1048 VEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQ 1107
Query: 585 L 585
L
Sbjct: 1108 L 1108
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 89.4 bits (220), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 87/400 (21%), Positives = 180/400 (45%), Gaps = 20/400 (5%)
Query: 295 SFSDVIHACGRTQNSGLAEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRGLRNGMEVLKIM 354
++ V++ + + LA L+ +M++ ++ ++ I ++ R + + + + K M
Sbjct: 152 TYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM 211
Query: 355 QQNNLKPQDSTIATL-SVECSKALELDLAEALLDQISRCTNPK--PFSAFLAACDTMDKP 411
+ ++P T ++L S CS D ++ L D I + NP F+A + A K
Sbjct: 212 ETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKF 271
Query: 412 ERAIKIFAKM-RQKLRPDIRTYELLFSLFGNVNAPYEEGNMFSQVDSAKRINAIEMDMAR 470
A K+ M ++ + PDI TY L + F M ++D AK++ E +++
Sbjct: 272 VEAEKLHDDMIKRSIDPDIFTYNSLINGFC----------MHDRLDKAKQM--FEFMVSK 319
Query: 471 N---NIQHSHISMKNLLKALGAEGMIRELIQYFCDSKTPLGTPTYNTVLHSLVEAQESHR 527
+ ++ + +K K+ E EL + T TY T++ L +
Sbjct: 320 DCFPDLDTYNTLIKGFCKSKRVEDGT-ELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDN 378
Query: 528 AMEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASALVSMMVRDGFYPQTMTYTALIK 587
A ++FKQM + G+PP+ TY+I++D + A + M + YT +I+
Sbjct: 379 AQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIE 438
Query: 588 ILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILKKACEKGRIDVIEFIIEQMHQNKVQP 647
+ G D+ +L +SL+G+ +V+ YNT++ C K + ++++M ++ P
Sbjct: 439 GMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLP 498
Query: 648 DPSTCHFVFSGYVNCGFHNSAMEALQVLSMRMLCEEVSTL 687
D T + + ++ G ++ E ++ + + ST+
Sbjct: 499 DSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTI 538
Score = 84.0 bits (206), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 101/476 (21%), Positives = 189/476 (39%), Gaps = 32/476 (6%)
Query: 226 SIFSLRKFVWSFTRLRDLKSAYETLQHMVALAMMGKLY-----IN---RTSEGRLRSSRL 277
SIF K + + +++ + M L + LY IN R S+ L + L
Sbjct: 9 SIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALL 68
Query: 278 DIPIPLNALPVMKVLRWSFSDVIHACGRTQNSGLAEQLMLQMQSLGLQPSSHTYDGFIRA 337
+ L P + L + H G+ + +A L+ QM +G +P + T+ I
Sbjct: 69 GKMMKLGYEPSIVTLSSLLNGYCH--GKRISDAVA--LVDQMVEMGYRPDTITFTTLIHG 124
Query: 338 IVSDRGLRNGMEVLKIMQQNNLKPQDSTIATLSVECSKALELDLAEALLDQISRCTNPKP 397
+ + ++ M Q +P T + K ++DLA LL+++
Sbjct: 125 LFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEAD 184
Query: 398 FSAFLAACDTMDK---PERAIKIFAKMRQK-LRPDIRTYELLFSLFGNVNAPYEEGNMFS 453
F D++ K + A+ +F +M K +RP++ TY L S + + + S
Sbjct: 185 VVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLS 244
Query: 454 QVDSAKRINAIEMDMARNNIQHSHISMKNLLKALGAEGMIRELIQYFCDSKTPLGTP--- 510
DM I + ++ L+ A EG E + D P
Sbjct: 245 -------------DMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIF 291
Query: 511 TYNTVLHSLVEAQESHRAMEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASALVSMM 570
TYN++++ +A ++F+ M + P+ TYN +I + + + L M
Sbjct: 292 TYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREM 351
Query: 571 VRDGFYPQTMTYTALIKILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILKKACEKGRI 630
G T+TYT LI+ L GD D A + + +G+P D++ Y+ +L C G++
Sbjct: 352 SHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKL 411
Query: 631 DVIEFIIEQMHQNKVQPDPSTCHFVFSGYVNCGFHNSAMEALQVLSMRMLCEEVST 686
+ + + M +++++ D + G G + + LS++ + V T
Sbjct: 412 EKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVT 467
Score = 71.2 bits (173), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 81/356 (22%), Positives = 141/356 (39%), Gaps = 40/356 (11%)
Query: 276 RLDIPIPLNALPVMKVLRWS-----FSDVIHACGRTQNSGLAEQLMLQMQSLGLQPSSHT 330
R DI + N L M+ + F+ +I + + ++ A L +M++ G++P+ T
Sbjct: 163 RGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVT 222
Query: 331 YDGFIRAIVSDRGLRNGMEVLKIMQQNNLKPQDSTIATLSVECSKALELDLAEALLDQ-I 389
Y I + S + ++L M + + P T L K + AE L D I
Sbjct: 223 YSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMI 282
Query: 390 SRCTNPKPFS--AFLAACDTMDKPERAIKIFAKMRQK-LRPDIRTYELLFSLFGNVNAPY 446
R +P F+ + + D+ ++A ++F M K PD+ TY L F
Sbjct: 283 KRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVE 342
Query: 447 EEGNMFSQV-------------------------DSAKRINAIEMDMARNNIQHSHISMK 481
+ +F ++ D+A+++ M + + ++
Sbjct: 343 DGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFK---QMVSDGVPPDIMTYS 399
Query: 482 NLLKALGAEGMIR---ELIQYFCDSKTPLGTPTYNTVLHSLVEAQESHRAMEIFKQMKTC 538
LL L G + E+ Y S+ L Y T++ + +A + ++F +
Sbjct: 400 ILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLK 459
Query: 539 GIPPNAATYNIMIDCCSIIRCFKSASALVSMMVRDGFYPQTMTYTALIKILLDYGD 594
G+ PN TYN MI R + A AL+ M DG P + TY LI+ L GD
Sbjct: 460 GVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGD 515
Score = 49.7 bits (117), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 84/460 (18%), Positives = 177/460 (38%), Gaps = 76/460 (16%)
Query: 93 ILNYCARSPDPLFVMETWRMMEEKEIGLNNKCYLLMMQALCKGGYLEEASNLIYFLGERY 152
++N + D ME +I + + ++ +LCK ++++A NL + E
Sbjct: 156 VVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM-ETK 214
Query: 153 GIYPILPVYNSFLGACAKLHSMVHANLCLDLMDSRMVGKNEVTYTELLKLAVWQKNLSAV 212
GI P + Y+S + A+ L M + + N VT+ L+ V +
Sbjct: 215 GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEA 274
Query: 213 HEIWEDYIKH-YSLSIFSLRKFVWSFTRLRDLKSAYETLQHMVALAMMGKLYINRTSEGR 271
++ +D IK IF+ + F L A + + MV+
Sbjct: 275 EKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSK--------------- 319
Query: 272 LRSSRLDIPIPLNALPVMKVLRWSFSDVIHACGRTQNSGLAEQLMLQMQSLGLQPSSHTY 331
+ P + +++ +I +++ +L +M GL + TY
Sbjct: 320 ------------DCFPDLD----TYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTY 363
Query: 332 DGFIRAIVSDRGLRNGMEVLKIMQQNNLKPQDSTIATLSVECSKALELDLAEALLDQISR 391
I+ + D N +V K M + + P I T S+ LLD +
Sbjct: 364 TTLIQGLFHDGDCDNAQKVFKQMVSDGVPPD---IMTYSI-------------LLDGL-- 405
Query: 392 CTNPKPFSAFLAACDTMDKPERAIKIFAKMRQ-KLRPDIRTYELLFSLFGNVNAPYEEGN 450
C N K E+A+++F M++ +++ DI Y + + +
Sbjct: 406 CNNGKL--------------EKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWD 451
Query: 451 MFSQVDSAKRINAIEMDMARNNIQHSHISMKNLLKALGAEGMIRELIQYFCDSKTPLGTP 510
+F + + ++ ++ N S + K LL+ A +++++ + D P +
Sbjct: 452 LFCSL----SLKGVKPNVVTYNTMISGLCSKRLLQE--AYALLKKMKE---DGPLP-DSG 501
Query: 511 TYNTVLHSLVEAQESHRAMEIFKQMKTCGIPPNAATYNIM 550
TYNT++ + + + + E+ ++M++C +A+T ++
Sbjct: 502 TYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLV 541
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 89.0 bits (219), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 92/389 (23%), Positives = 170/389 (43%), Gaps = 24/389 (6%)
Query: 294 WSFSDVIHACGRTQNSGLAEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRGLRNGMEVLKI 353
++ S +I+ R + LA M ++ LG +P++ T+ I + + + +E++
Sbjct: 124 YTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDR 183
Query: 354 MQQNNLKPQDSTIATL-SVECSKALELDLAEALLDQISR--CT-NPKPFSAFLAACDTMD 409
M + KP TI TL + C E + A L+D++ C N + L
Sbjct: 184 MVEMGHKPDLITINTLVNGLCLSGKEAE-AMLLIDKMVEYGCQPNAVTYGPVLNVMCKSG 242
Query: 410 KPERAIKIFAKMRQK-LRPDIRTYELLFSLFGNVNAPYEEGNMFSQVDSAKRINAIEMDM 468
+ A+++ KM ++ ++ D Y ++ + N+F N +EM
Sbjct: 243 QTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLF---------NEMEMKG 293
Query: 469 ARNNIQHSHISMKNLLKAL----GAEGMIRELIQYFCDSKTPLGTPTYNTVLHSLVEAQE 524
NI +I + A GA+ ++R++I+ K T++ ++ S V+ +
Sbjct: 294 ITTNIITYNILIGGFCNAGRWDDGAK-LLRDMIK----RKINPNVVTFSVLIDSFVKEGK 348
Query: 525 SHRAMEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASALVSMMVRDGFYPQTMTYTA 584
A E+ K+M GI P+ TY +ID A+ +V +MV G P T+
Sbjct: 349 LREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNI 408
Query: 585 LIKILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILKKACEKGRIDVIEFIIEQMHQNK 644
LI D+ L L +SL G+ D + YNT+++ CE G+++V + + ++M K
Sbjct: 409 LINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRK 468
Query: 645 VQPDPSTCHFVFSGYVNCGFHNSAMEALQ 673
V P+ T + G + G A+E +
Sbjct: 469 VPPNIVTYKILLDGLCDNGESEKALEIFE 497
Score = 72.8 bits (177), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 81/409 (19%), Positives = 170/409 (41%), Gaps = 33/409 (8%)
Query: 312 AEQLML--QMQSLGLQPSSHTYDGFIRAIVSDRGLRNGMEVLKIMQQNNLKPQDSTIATL 369
AE ++L +M G QP++ TY + + ME+L+ M++ N+K + +
Sbjct: 210 AEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSII 269
Query: 370 SVECSKALELDLAEALLDQISR---CTNPKPFSAFLAACDTMDKPERAIKIFAKM-RQKL 425
K LD A L +++ TN ++ + + + K+ M ++K+
Sbjct: 270 IDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKI 329
Query: 426 RPDIRTYELLFSLFGNVNAPYEEGNMFSQV-------DSAKRINAIEMDMARNNIQHSHI 478
P++ T+ +L F E + ++ D+ + I+ N++ ++
Sbjct: 330 NPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKAN- 388
Query: 479 SMKNLLKALGAEGMIRE---LIQYFCDSK----------------TPLGTPTYNTVLHSL 519
M +L+ + G + IR LI +C + T TYNT++
Sbjct: 389 QMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGF 448
Query: 520 VEAQESHRAMEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASALVSMMVRDGFYPQT 579
E + + A E+F++M + +PPN TY I++D + A + + +
Sbjct: 449 CELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDI 508
Query: 580 MTYTALIKILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILKKACEKGRIDVIEFIIEQ 639
Y +I + + D+A +L + L+G+ V YN ++ C+KG + E + +
Sbjct: 509 GIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRK 568
Query: 640 MHQNKVQPDPSTCHFVFSGYVNCGFHNSAMEALQVLSMRMLCEEVSTLE 688
M ++ PD T + + ++ G +++ ++ L + ST++
Sbjct: 569 MEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIK 617
Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 106/506 (20%), Positives = 202/506 (39%), Gaps = 75/506 (14%)
Query: 59 IVDALC-RGERSRASHLLLNLGHAHHSLGADDFFHILNYCARSPDPLFVMETWRMMEEKE 117
+V+ LC G+ + A L+ + A + +LN +S ME R MEE+
Sbjct: 199 LVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERN 258
Query: 118 IGLNNKCYLLMMQALCKGGYLEEASNLIYFLGERYGIYPILPVYNSFLGACAKLHSMVHA 177
I L+ Y +++ LCK G L+ A NL + E GI + YN +G
Sbjct: 259 IKLDAVKYSIIIDGLCKHGSLDNAFNLFNEM-EMKGITTNIITYNILIGGFCNAGRWDDG 317
Query: 178 NLCLDLMDSRMVGKNEVTYTELLKLAVWQKNLSAVHEIWEDYIKHYSLSIFSLRKFVWSF 237
L M R + N VT++ L+ V + L E+ ++ I H ++ ++ ++
Sbjct: 318 AKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMI-HRGIAPDTI-----TY 371
Query: 238 TRLRDLKSAYETLQHMVALAMMGKLYINRTSEGRLRSSRLDIPIPLNALPVMKVLRWSFS 297
T L D + H+ M L +++ + +R +F+
Sbjct: 372 TSLID---GFCKENHLDKANQMVDLMVSKGCDPNIR---------------------TFN 407
Query: 298 DVIHACGRTQNSGLAEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRGLRNGMEVLKIMQQN 357
+I+ + +L +M G+ + TY+ I+ L E+ + M
Sbjct: 408 ILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSR 467
Query: 358 NLKPQDSTIATLSVECSKALELDLAEALLDQISRCTNPKPFSAFLAACDTMDKPERAIKI 417
+ P I T + LLD + CD + E+A++I
Sbjct: 468 KVPPN---IVTYKI-------------LLDGL---------------CDN-GESEKALEI 495
Query: 418 FAKM-RQKLRPDIRTYELLFSLFGNVNAPYEEGNMFSQVDSAKRINAIEMDMARNNIQHS 476
F K+ + K+ DI Y ++ N + + ++F + + ++ + NI
Sbjct: 496 FEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLP----LKGVKPGVKTYNIMIG 551
Query: 477 HISMKNLLKALGAEGMIRELIQYFCDSKTPLGTPTYNTVLHSLVEAQESHRAMEIFKQMK 536
+ K L AE + R++ + D P G TYN ++ + + ++ +++++ +++K
Sbjct: 552 GLCKKGPLSE--AELLFRKMEE---DGHAPDGW-TYNILIRAHLGDGDATKSVKLIEELK 605
Query: 537 TCGIPPNAATYNIMIDCCSIIRCFKS 562
CG +A+T ++ID S R KS
Sbjct: 606 RCGFSVDASTIKMVIDMLSDGRLKKS 631
Score = 64.7 bits (156), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 95/198 (47%), Gaps = 10/198 (5%)
Query: 484 LKALGAEGMIRELIQYFCDSKTPLGTPT-YNTVLHSLVEAQESHRAMEIFKQMKTCGIPP 542
+KA A + R++I PL T ++ + ++ + ++ + + KQM+ GI
Sbjct: 67 IKADDAIDLFRDMIH-----SRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAH 121
Query: 543 NAATYNIMIDCCSIIRCFKSASALVSM--MVRDGFYPQTMTYTALIKILLDYGDFDEALN 600
N T +IMI+C RC K A +M +++ G+ P T+T++ LI L G EAL
Sbjct: 122 NLYTLSIMINC--FCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALE 179
Query: 601 LLDLVSLEGIPHDVLLYNTILKKACEKGRIDVIEFIIEQMHQNKVQPDPSTCHFVFSGYV 660
L+D + G D++ NT++ C G+ +I++M + QP+ T V +
Sbjct: 180 LVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMC 239
Query: 661 NCGFHNSAMEALQVLSMR 678
G AME L+ + R
Sbjct: 240 KSGQTALAMELLRKMEER 257
Score = 63.2 bits (152), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 78/355 (21%), Positives = 143/355 (40%), Gaps = 26/355 (7%)
Query: 312 AEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRGLRNGMEVLKIMQQNNLKPQDSTIATLSV 371
A L +M+ G+ + TY+ I + +G ++L+ M + + P T + L
Sbjct: 282 AFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLID 341
Query: 372 ECSKALELDLAEAL-LDQISRCTNPKPF---SAFLAAC--DTMDKPERAIKIFAKMRQKL 425
K +L AE L + I R P S C + +DK + + + + +
Sbjct: 342 SFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLM--VSKGC 399
Query: 426 RPDIRTYELLFSLFGNVNAPYEEGNMFSQVDSAKRINAIEMDMARNNIQHSHISMKNLLK 485
P+IRT+ +L + + N + +F + M+ + ++ L++
Sbjct: 400 DPNIRTFNILINGYCKANRIDDGLELFRK-------------MSLRGVVADTVTYNTLIQ 446
Query: 486 A---LGAEGMIRELIQYFCDSKTPLGTPTYNTVLHSLVEAQESHRAMEIFKQMKTCGIPP 542
LG + +EL Q K P TY +L L + ES +A+EIF++++ +
Sbjct: 447 GFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMEL 506
Query: 543 NAATYNIMI-DCCSIIRCFKSASALVSMMVRDGFYPQTMTYTALIKILLDYGDFDEALNL 601
+ YNI+I C+ + + S+ ++ G P TY +I L G EA L
Sbjct: 507 DIGIYNIIIHGMCNASKVDDAWDLFCSLPLK-GVKPGVKTYNIMIGGLCKKGPLSEAELL 565
Query: 602 LDLVSLEGIPHDVLLYNTILKKACEKGRIDVIEFIIEQMHQNKVQPDPSTCHFVF 656
+ +G D YN +++ G +IE++ + D ST V
Sbjct: 566 FRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVI 620
>sp|Q9S7R4|PP125_ARATH Pentatricopeptide repeat-containing protein At1g74900,
mitochondrial OS=Arabidopsis thaliana GN=OTP43 PE=2 SV=1
Length = 482
Score = 88.6 bits (218), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 126/311 (40%), Gaps = 19/311 (6%)
Query: 354 MQQNNLKPQDSTIATLSVECSKALELDLAEALLDQISRCTNPKPFSAFLAACDTMDKP-- 411
M+ + P T A ++ + A + D A L + + ++F D + K
Sbjct: 117 MRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKR 176
Query: 412 -ERAIKIFAKMRQKLRPDIRTYELLFSLFGNVNAPYEEGNMFSQVDSAKRINAIEMDMAR 470
E+A ++F +R + D TY ++ N + + + + +M
Sbjct: 177 VEKAYELFRALRGRFSVDTVTYNVIL-------------NGWCLIKRTPKALEVLKEMVE 223
Query: 471 NNIQHSHISMKNLLKALGAEGMIRELIQYFCDSKT---PLGTPTYNTVLHSLVEAQESHR 527
I + + +LK G IR ++F + K + TY TV+H A E R
Sbjct: 224 RGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKR 283
Query: 528 AMEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASALVSMMVRDGFYPQTMTYTALIK 587
A +F +M G+ P+ ATYN MI ++A + MVR G+ P TY LI+
Sbjct: 284 ARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIR 343
Query: 588 ILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILKKACEKGRIDVIEFIIEQMHQNKVQP 647
L G+F L+ + EG + YN +++ E ++ + E+M P
Sbjct: 344 GLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLP 403
Query: 648 DPSTCHFVFSG 658
+ T + + SG
Sbjct: 404 NLDTYNILISG 414
Score = 66.2 bits (160), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 76/165 (46%)
Query: 509 TPTYNTVLHSLVEAQESHRAMEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASALVS 568
T TYN +L+ + + +A+E+ K+M GI PN TYN M+ + A
Sbjct: 195 TVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFL 254
Query: 569 MMVRDGFYPQTMTYTALIKILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILKKACEKG 628
M + +TYT ++ G+ A N+ D + EG+ V YN +++ C+K
Sbjct: 255 EMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKD 314
Query: 629 RIDVIEFIIEQMHQNKVQPDPSTCHFVFSGYVNCGFHNSAMEALQ 673
++ + E+M + +P+ +T + + G + G + E +Q
Sbjct: 315 NVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQ 359
Score = 38.5 bits (88), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 63/147 (42%), Gaps = 4/147 (2%)
Query: 295 SFSDVIHACGRTQNSGLAEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRGLRNGMEVLKIM 354
+++ V+H G A + +M G+ PS TY+ I+ + + N + + + M
Sbjct: 267 TYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEM 326
Query: 355 QQNNLKPQDSTIATLSVECSKALELDLAEALLDQISR--C-TNPKPFSAFLAACDTMDKP 411
+ +P +T L A E E L+ ++ C N + ++ + +
Sbjct: 327 VRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEV 386
Query: 412 ERAIKIFAKMRQ-KLRPDIRTYELLFS 437
E+A+ +F KM P++ TY +L S
Sbjct: 387 EKALGLFEKMGSGDCLPNLDTYNILIS 413
Score = 34.3 bits (77), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 38/192 (19%), Positives = 81/192 (42%), Gaps = 6/192 (3%)
Query: 498 QYFCDSKTPLGTPT-YNTVLHSLVEAQESHRAMEIFKQMKTCG--IPPNAATYNIMIDCC 554
Q+ +KT TP N+VL L +A++ F + +A+++++ ID
Sbjct: 44 QFLLSTKTTPWTPNLVNSVLKRL--WNHGPKALQFFHFLDNHHREYVHDASSFDLAIDIA 101
Query: 555 SIIRCFKSASALVSMMVRDGFYPQTMTYTALIKILLDYGDFDEALNLLDLVSLEGIPHDV 614
+ + + +L+ M P T+ + + G D+A+ L + G D+
Sbjct: 102 ARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDL 161
Query: 615 LLYNTILKKACEKGRIDVIEFIIEQMHQNKVQPDPSTCHFVFSGYVNCGFHNSAMEALQV 674
+NTIL C+ R++ + + + + D T + + +G+ A+E L+
Sbjct: 162 ASFNTILDVLCKSKRVEKAYELFRAL-RGRFSVDTVTYNVILNGWCLIKRTPKALEVLKE 220
Query: 675 LSMRMLCEEVST 686
+ R + ++T
Sbjct: 221 MVERGINPNLTT 232
>sp|Q9FIT7|PP442_ARATH Pentatricopeptide repeat-containing protein At5g61990,
mitochondrial OS=Arabidopsis thaliana GN=At5g61990 PE=2
SV=1
Length = 974
Score = 87.8 bits (216), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 111/601 (18%), Positives = 239/601 (39%), Gaps = 83/601 (13%)
Query: 108 ETWRMMEEKEIGLNNKCYLLMMQALCKGGYLEEASNLIYFLGERY--------------- 152
+ ++ M E+ + + K Y +++ A C+ G ++ ++++ + +
Sbjct: 207 DVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKE 266
Query: 153 -----GIYPILPVYNSFLGACAKLHSMVHANLCLDLMDSRMVGKNEVTYTELLKLAVWQK 207
G+ P+ Y+ + K+ + A L MDS V + TY+ L+ + +
Sbjct: 267 SMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGR 326
Query: 208 NLSAVHEIWEDYIKH-YSLSIFSLRKFVWSFTRLRDLKSAYETLQHMVALAMM--GKLYI 264
N A + + + H ++ + + ++ ++ A M+A ++ + Y
Sbjct: 327 NADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYA 386
Query: 265 NRTSEGRLRSSRLDIPIPLNALPVMK-----VLRWSFSDVIHACGRTQNSGLAEQLMLQM 319
+ EG R + L L MK + +++ V+ + + A ++ +M
Sbjct: 387 SLI-EGYCREKNVRQGYEL--LVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEM 443
Query: 320 QSLGLQPSSHTYDGFIRAIVSDRGLRNGMEVLKIMQQNNLKPQDSTIATLSVECSKALEL 379
+ G +P+ Y I+ + + + M VLK M++ + P +L + SKA +
Sbjct: 444 IASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRM 503
Query: 380 DLAEALLDQISRCTNPKPFSAFLAACDTMDKPERAIKIFAKMRQKLRPDIRTYELLFSLF 439
D A + L ++ + L+P+ TY
Sbjct: 504 DEARSFLVEM-------------------------------VENGLKPNAFTY------- 525
Query: 440 GNVNAPYEEGNMFSQVDSAKRINAIEMDMARNNIQHSHISMKNLLKALGAEGMIRELIQY 499
G + Y E + F+ D + +M + + + L+ +G + E
Sbjct: 526 GAFISGYIEASEFASADKYVK------EMRECGVLPNKVLCTGLINEYCKKGKVIEACSA 579
Query: 500 F---CDSKTPLGTPTYNTVLHSLVEAQESHRAMEIFKQMKTCGIPPNAATYNIMIDCCSI 556
+ D TY +++ L + + A EIF++M+ GI P+ +Y ++I+ S
Sbjct: 580 YRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSK 639
Query: 557 IRCFKSASALVSMMVRDGFYPQTMTYTALIKILLDYGDFDEALNLLDLVSLEGIPHDVLL 616
+ + AS++ MV +G P + Y L+ G+ ++A LLD +S++G+ + +
Sbjct: 640 LGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVT 699
Query: 617 YNTILKKACEKGRIDVIEFIIEQMHQNKVQPDPSTCHFVFSGYVN-CGFHNSAMEALQVL 675
Y TI+ C+ G + + ++M + PD FV++ V+ C N A+ +
Sbjct: 700 YCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPD----SFVYTTLVDGCCRLNDVERAITIF 755
Query: 676 S 676
Sbjct: 756 G 756
Score = 84.3 bits (207), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 132/634 (20%), Positives = 242/634 (38%), Gaps = 90/634 (14%)
Query: 113 MEEKEIGLNNKCYLLMMQALCKGGYLEEASNLIYFLGERYGIYPILPVYNSFLGACAKLH 172
M+ + L+N Y L++ L KG + A L++ + +GI +Y+ + +K
Sbjct: 303 MDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEM-VSHGINIKPYMYDCCICVMSKEG 361
Query: 173 SMVHANLCLDLMDSRMVGKNEVTYTELLKLAVWQKNLSAVHEIWEDYIK-HYSLSIFSLR 231
M A D M + + Y L++ +KN+ +E+ + K + +S ++
Sbjct: 362 VMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYG 421
Query: 232 KFVWSFTRLRDLKSAYETLQHMVALAMMGKLYINRT-SEGRLRSSRLDIPIPLNALPVMK 290
V DL AY ++ M+A + I T + L++SR +A+ V+K
Sbjct: 422 TVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFG-----DAMRVLK 476
Query: 291 VLR--------WSFSDVIHACGRTQNSGLAEQLMLQMQSLGLQPSSHTYDGFIRAIVSDR 342
++ + ++ +I + + A +++M GL+P++ TY FI +
Sbjct: 477 EMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEAS 536
Query: 343 GLRNGMEVLKIMQQNNLKPQDSTIATLSVE-CSKALELDLAEA---LLDQISRCTNPKPF 398
+ + +K M++ + P L E C K ++ A ++DQ + K +
Sbjct: 537 EFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQ-GILGDAKTY 595
Query: 399 SAFLAACDTMDKPERAIKIFAKMRQK-LRPDIRTYELL---FSLFGNVNAP-------YE 447
+ + DK + A +IF +MR K + PD+ +Y +L FS GN+ E
Sbjct: 596 TVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVE 655
Query: 448 EG--------NM----FSQVDSAKRINAIEMDMARNNIQHSHISMKNLLKALGAEGMIRE 495
EG NM F + ++ + +M+ + + ++ ++ G + E
Sbjct: 656 EGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAE 715
Query: 496 LIQYFCDSKTPLGTP---TYNTVLHSLVEAQESHRAMEIF-KQMKTCGIP---------- 541
+ F + K P Y T++ + RA+ IF K C
Sbjct: 716 AFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINW 775
Query: 542 ---------------------------PNAATYNIMIDCCSIIRCFKSASALVSMMVRDG 574
PN TYNIMID ++A L M
Sbjct: 776 VFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNAN 835
Query: 575 FYPQTMTYTALIKILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILKKACEKGRIDVIE 634
P +TYT+L+ G E + D GI D ++Y+ I+ ++G
Sbjct: 836 LMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKAL 895
Query: 635 FIIEQMHQNKVQPDP-----STCHFVFSGYVNCG 663
+++QM D STC + SG+ G
Sbjct: 896 VLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVG 929
Score = 66.6 bits (161), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 82/374 (21%), Positives = 147/374 (39%), Gaps = 51/374 (13%)
Query: 312 AEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRGLRNGMEVLKIMQQNNLKPQDSTIATLSV 371
A+ L M + GL P + Y I ++ +R G E+L M++ N+ T T+
Sbjct: 366 AKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVK 425
Query: 372 ECSKALELDLAEALLDQI--SRC-TNPKPFSAFLAACDTMDKPERAIKIFAKMR-QKLRP 427
+ +LD A ++ ++ S C N ++ + + A+++ +M+ Q + P
Sbjct: 426 GMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAP 485
Query: 428 DIRTYELLFSLFGNVNAPYEEGNMFSQVDSAKRINAIEMDMARNNIQHSHISMKNLLKAL 487
DI Y ++ + AKR MD AR+ + ++N LK
Sbjct: 486 DIFCYN----------------SLIIGLSKAKR-----MDEARSFLVEM---VENGLKP- 520
Query: 488 GAEGMIRELIQYFCDSKTPLGTPTYNTVLHSLVEAQESHRAMEIFKQMKTCGIPPNAATY 547
TY + +EA E A + K+M+ CG+ PN
Sbjct: 521 --------------------NAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLC 560
Query: 548 NIMI-DCCSIIRCFKSASALVSMMVRDGFYPQTMTYTALIKILLDYGDFDEALNLLDLVS 606
+I + C + ++ SA SM V G TYT L+ L D+A + +
Sbjct: 561 TGLINEYCKKGKVIEACSAYRSM-VDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMR 619
Query: 607 LEGIPHDVLLYNTILKKACEKGRIDVIEFIIEQMHQNKVQPDPSTCHFVFSGYVNCGFHN 666
+GI DV Y ++ + G + I ++M + + P+ + + G+ G
Sbjct: 620 GKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIE 679
Query: 667 SAMEALQVLSMRML 680
A E L +S++ L
Sbjct: 680 KAKELLDEMSVKGL 693
Score = 60.1 bits (144), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 75/177 (42%), Gaps = 6/177 (3%)
Query: 511 TYNTVLHSLVEAQESHRAMEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASALVSMM 570
Y +++ + + E+ +MK I + TY ++ A +V M
Sbjct: 384 AYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEM 443
Query: 571 VRDGFYPQTMTYTALIKILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILKKACEKGRI 630
+ G P + YT LIK L F +A+ +L + +GI D+ YN+++ + R+
Sbjct: 444 IASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRM 503
Query: 631 DVIEFIIEQMHQNKVQPDPSTCHFVFSGYVNCGFHNSA------MEALQVLSMRMLC 681
D + +M +N ++P+ T SGY+ SA M VL ++LC
Sbjct: 504 DEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLC 560
Score = 50.8 bits (120), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 74/362 (20%), Positives = 137/362 (37%), Gaps = 42/362 (11%)
Query: 312 AEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRGLRNGMEVLKIMQQNNLKPQDSTIATLSV 371
AE++ +M+ G+ P +Y I ++ + M + L P L
Sbjct: 611 AEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLG 670
Query: 372 ECSKALELDLAEALLDQIS-RCTNPKPFS---AFLAACDTMDKPERAIKIFAKMRQK-LR 426
++ E++ A+ LLD++S + +P + C + D E A ++F +M+ K L
Sbjct: 671 GFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAE-AFRLFDEMKLKGLV 729
Query: 427 PDIRTYELLFSLFGNVNAPYEEGNMFSQVDSAKRINAIEMDMARNNIQHSHIS------- 479
PD Y L VD R+N +E + +
Sbjct: 730 PDSFVYTTL-------------------VDGCCRLNDVERAITIFGTNKKGCASSTAPFN 770
Query: 480 -MKNLLKALGAEGMIRELIQYFCD-SKTPLGTP---TYNTVLHSLVEAQESHRAMEIFKQ 534
+ N + G + E++ D S G P TYN ++ L + A E+F Q
Sbjct: 771 ALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQ 830
Query: 535 MKTCGIPPNAATYNIMIDCCSIIRCFKSASALVSMMVRDGFYPQTMTYTALIKILLDYGD 594
M+ + P TY +++ + + + G P + Y+ +I L G
Sbjct: 831 MQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGM 890
Query: 595 FDEALNLLDLVSL-----EGIPHDVLLYNTILKKACEKGRIDVIEFIIEQMHQNKVQPDP 649
+AL L+D + +G + +L + G ++V E ++E M + + PD
Sbjct: 891 TTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDS 950
Query: 650 ST 651
+T
Sbjct: 951 AT 952
Score = 40.0 bits (92), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 105/264 (39%), Gaps = 32/264 (12%)
Query: 108 ETWRMMEEKEIGLNNKCYLLMMQALCKGGYLEEASNLIYFLGERYGIYPILPVYNSFLGA 167
E +R M K I + Y +++ K G +++AS++ + E G+ P + +YN LG
Sbjct: 613 EIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEE-GLTPNVIIYNMLLGG 671
Query: 168 CAKLHSMVHANLCLDLMDSRMVGKNEVTYTELLKLAVWQKNLSAVHEIWEDY-IKHYSLS 226
+ + A LD M + + N VTY ++ +L+ ++++ +K
Sbjct: 672 FCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPD 731
Query: 227 IFSLRKFVWSFTRLRDLKSAYETLQHMVALAMMGKLYINRTSEGRLRSSRLDIPIPLNAL 286
F V RL D++ A + I T++ SS P NAL
Sbjct: 732 SFVYTTLVDGCCRLNDVERA---------------ITIFGTNKKGCASS----TAPFNAL 772
Query: 287 PVMKVLRWSFSDVIHACGRTQ-NSGLAEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRGLR 345
+ W F G+T+ + + +LM +P+ TY+ I + + L
Sbjct: 773 -----INWVFK-----FGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLE 822
Query: 346 NGMEVLKIMQQNNLKPQDSTIATL 369
E+ MQ NL P T +L
Sbjct: 823 AAKELFHQMQNANLMPTVITYTSL 846
>sp|Q9SS81|PP221_ARATH Pentatricopeptide repeat-containing protein At3g09060
OS=Arabidopsis thaliana GN=At3g09060 PE=2 SV=1
Length = 687
Score = 87.8 bits (216), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 89/187 (47%), Gaps = 5/187 (2%)
Query: 482 NLLKALGAEGMIRELIQYFCDSKTPLGTP----TYNTVLHSLVEAQESHRAMEIFKQMKT 537
+++K G M + + F + G +YNT+L++ VEA++ + +F +T
Sbjct: 83 SVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFET 142
Query: 538 CGIPPNAATYNIMIDCCSIIRCFKSASALVSMMVRDGFYPQTMTYTALIKILLDYGDFDE 597
G+ PN TYN++I + F+ A + M ++GF P +Y+ +I L G D+
Sbjct: 143 AGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDD 202
Query: 598 ALNLLDLVSLEGIPHDVLLYNTILKKAC-EKGRIDVIEFIIEQMHQNKVQPDPSTCHFVF 656
AL L D +S G+ DV YN ++ EK +E + + V P+ T + +
Sbjct: 203 ALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMI 262
Query: 657 SGYVNCG 663
SG CG
Sbjct: 263 SGLSKCG 269
Score = 70.5 bits (171), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 80/395 (20%), Positives = 169/395 (42%), Gaps = 27/395 (6%)
Query: 281 IPLNALPVMKVLR---------WSFSDVIHACGRTQNSGLAEQLMLQMQSLGLQPSSHTY 331
+P AL V K +R S++ +++A + E L ++ G+ P+ TY
Sbjct: 93 MPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTY 152
Query: 332 DGFIRAIVSDRGLRNGMEVLKIMQQNNLKPQDSTIATLSVECSKALELDLAEALLDQISR 391
+ I+ + L M + KP + +T+ + +KA +LD A L D++S
Sbjct: 153 NVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSE 212
Query: 392 CTNPKPFSAFLAACDTMDKP---ERAIKIFAKMRQ--KLRPDIRTYELLFSLFGNVNAPY 446
+ + D K + A++++ ++ + + P+++T+ ++ S
Sbjct: 213 RGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVD 272
Query: 447 EEGNMFSQVDSAKRINAIEMDM-ARNNIQHSHISMKNLLKALGAEGMIRELIQYFCDSKT 505
+ ++ ++ +R E D+ +++ H N+ K AE + EL + K
Sbjct: 273 DCLKIWERMKQNER----EKDLYTYSSLIHGLCDAGNVDK---AESVFNELDE----RKA 321
Query: 506 PLGTPTYNTVLHSLVEAQESHRAMEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASA 565
+ TYNT+L + ++E+++ M+ N +YNI+I A+
Sbjct: 322 SIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN-SVNIVSYNILIKGLLENGKIDEATM 380
Query: 566 LVSMMVRDGFYPQTMTYTALIKILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILKKAC 625
+ +M G+ TY I L G ++AL ++ V G DV Y +I+ C
Sbjct: 381 IWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLC 440
Query: 626 EKGRIDVIEFIIEQMHQNKVQPDPSTCHFVFSGYV 660
+K R++ ++++M ++ V+ + C+ + G +
Sbjct: 441 KKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLI 475
Score = 66.6 bits (161), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 94/206 (45%), Gaps = 16/206 (7%)
Query: 475 HSHISMKNLLKALGAEGMIR------ELI---QYFCDSKTPLGTPTYNTVLHSLVEAQES 525
HS + ++L+ L M+ ELI + CD L +V+ + +
Sbjct: 41 HSAVVYHHILRRLSETRMVNHVSRIVELIRSQECKCDEDVAL------SVIKTYGKNSMP 94
Query: 526 HRAMEIFKQMKTC-GIPPNAATYNIMIDCCSIIRCFKSASALVSMMVRDGFYPQTMTYTA 584
+A+++FK+M+ G P +YN +++ + + +L + G P TY
Sbjct: 95 DQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNV 154
Query: 585 LIKILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILKKACEKGRIDVIEFIIEQMHQNK 644
LIK+ +F++A LD + EG DV Y+T++ + G++D + ++M +
Sbjct: 155 LIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERG 214
Query: 645 VQPDPSTCHFVFSGYVNCGFHNSAME 670
V PD + + + G++ H +AME
Sbjct: 215 VAPDVTCYNILIDGFLKEKDHKTAME 240
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/360 (20%), Positives = 145/360 (40%), Gaps = 22/360 (6%)
Query: 312 AEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRGLRNGMEVLKIMQQNNLKPQDSTIATLSV 371
A + M G +P +Y I + L + +E+ M + + P D T + +
Sbjct: 168 ARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAP-DVTCYNILI 226
Query: 372 -----ECSKALELDLAEALLDQISRCTNPKPFSAFLAACDTMDKPERAIKIFAKMRQKLR 426
E ++L + LL+ S N K + ++ + + +KI+ +M+Q R
Sbjct: 227 DGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNER 286
Query: 427 -PDIRTYELLFSLFGNVNAPYEEGNMFSQVDSAKRINAIEMDMARNNIQHSHISMKNLLK 485
D+ TY L ++ + GN VD A+ + E+D + +I ++ +L
Sbjct: 287 EKDLYTYSSL------IHGLCDAGN----VDKAESVFN-ELDERKASIDV--VTYNTMLG 333
Query: 486 ALGAEGMIRELIQYF--CDSKTPLGTPTYNTVLHSLVEAQESHRAMEIFKQMKTCGIPPN 543
G I+E ++ + + K + +YN ++ L+E + A I++ M G +
Sbjct: 334 GFCRCGKIKESLELWRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAAD 393
Query: 544 AATYNIMIDCCSIIRCFKSASALVSMMVRDGFYPQTMTYTALIKILLDYGDFDEALNLLD 603
TY I I + A ++ + G + Y ++I L +EA NL+
Sbjct: 394 KTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVK 453
Query: 604 LVSLEGIPHDVLLYNTILKKACEKGRIDVIEFIIEQMHQNKVQPDPSTCHFVFSGYVNCG 663
+S G+ + + N ++ R+ F + +M +N +P + + + G G
Sbjct: 454 EMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAG 513
Score = 64.3 bits (155), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 74/374 (19%), Positives = 149/374 (39%), Gaps = 24/374 (6%)
Query: 294 WSFSDVIHACGRTQNSGLAEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRGLRNGMEVLKI 353
+S+S VI+ + A +L +M G+ P Y+ I + ++ + ME+
Sbjct: 185 FSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDR 244
Query: 354 MQQN-----NLKPQDSTIATLSVECSKALELDLAEALLDQISRCTNPKPFSAFLAACDTM 408
+ ++ N+K + I+ LS +C + + + Q R + +S+ +
Sbjct: 245 LLEDSSVYPNVKTHNIMISGLS-KCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDA 303
Query: 409 DKPERAIKIFAKM-RQKLRPDIRTYELLFSLFGNVNAPYEEGNMFSQVDSAKRINAIEMD 467
++A +F ++ +K D+ TY + F E ++ ++ +N + +
Sbjct: 304 GNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVSYN 363
Query: 468 MARNNIQHSHISMKNLLKALGAEGMIRE--LIQYFCDSKT-PLGTPTYNTVLHSLVEAQE 524
+ L+K L G I E +I +K TY +H L
Sbjct: 364 I--------------LIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGY 409
Query: 525 SHRAMEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASALVSMMVRDGFYPQTMTYTA 584
++A+ + +++++ G + Y +IDC + + AS LV M + G + A
Sbjct: 410 VNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNA 469
Query: 585 LIKILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILKKACEKGRIDVIEFIIEQMHQNK 644
LI L+ EA L + G V+ YN ++ C+ G+ +++M +N
Sbjct: 470 LIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENG 529
Query: 645 VQPDPSTCHFVFSG 658
+PD T + G
Sbjct: 530 WKPDLKTYSILLCG 543
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 118/629 (18%), Positives = 231/629 (36%), Gaps = 82/629 (13%)
Query: 79 GHAHHSLGADDFFHILNYCARSPDPLFVMETWRMMEEKEIGLNNKCYLLMMQALCKGGYL 138
G+AH ++ + HIL + + V ++ +E + L +++ K
Sbjct: 38 GYAHSAV---VYHHILRRLSETRMVNHVSRIVELIRSQECKCDEDVALSVIKTYGKNSMP 94
Query: 139 EEASNLIYFLGERYGIYPILPVYNSFLGACAKLHSMVHANLCLDLMDSRMVGKNEVTYTE 198
++A ++ + E +G P + YN+ L A + V ++ V N TY
Sbjct: 95 DQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNV 154
Query: 199 LLKLAVWQKNLSAVHE----IWEDYIKHYSLSIFSLRKFVWSFTRLRDLKSAYETLQHMV 254
L+K++ +K +W++ K +FS + + L A E M
Sbjct: 155 LIKMSCKKKEFEKARGFLDWMWKEGFKP---DVFSYSTVINDLAKAGKLDDALELFDEM- 210
Query: 255 ALAMMGKLYINRTSEGRLRSSRLDIPIPLNALPVMKVLRWSFSDVIHACGRTQNSGLAEQ 314
SE R D+ ++ +I + ++ A +
Sbjct: 211 -------------SE---RGVAPDVT--------------CYNILIDGFLKEKDHKTAME 240
Query: 315 LMLQ-MQSLGLQPSSHTYDGFIRAIVSDRGLRNGMEVLKIMQQNNLKPQDSTIATLSVEC 373
L + ++ + P+ T++ I + + + +++ + M+QN + T ++L
Sbjct: 241 LWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGL 300
Query: 374 SKALELDLAEAL---LDQISRCTNPKPFSAFLAACDTMDKPERAIKIFAKMRQKLRPDIR 430
A +D AE++ LD+ + ++ L K + +++++ M K +I
Sbjct: 301 CDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIV 360
Query: 431 TYELLFSLFGNVNAPYEEGNMFSQVDSAKRINAIEMDMARNNIQHSHISMKNLL-KALGA 489
+Y +L N +E M ++ AK A D I + + + KALG
Sbjct: 361 SYNILIKGLLE-NGKIDEATMIWRLMPAKGYAA---DKTTYGIFIHGLCVNGYVNKALGV 416
Query: 490 EGMIR------------ELIQYFCDSK----------------TPLGTPTYNTVLHSLVE 521
+ +I C K L + N ++ L+
Sbjct: 417 MQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIR 476
Query: 522 AQESHRAMEIFKQMKTCGIPPNAATYNIMIDCCSIIRC--FKSASALVSMMVRDGFYPQT 579
A ++M G P +YNI+I C + + F ASA V M+ +G+ P
Sbjct: 477 DSRLGEASFFLREMGKNGCRPTVVSYNILI--CGLCKAGKFGEASAFVKEMLENGWKPDL 534
Query: 580 MTYTALIKILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILKKACEKGRIDVIEFIIEQ 639
TY+ L+ L D AL L G+ DV+++N ++ C G++D ++
Sbjct: 535 KTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMAN 594
Query: 640 MHQNKVQPDPSTCHFVFSGYVNCGFHNSA 668
M + T + + G+ G N A
Sbjct: 595 MEHRNCTANLVTYNTLMEGFFKVGDSNRA 623
Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 90/544 (16%), Positives = 195/544 (35%), Gaps = 92/544 (16%)
Query: 93 ILNYCARSPDPLFVMETWRMMEEKEIGLNNKCYLLMMQALCKGGYLEEASNLIYFLGERY 152
++N A++ +E + M E+ + + CY +++ K + A L L E
Sbjct: 190 VINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDS 249
Query: 153 GIYPILPVYNSFLGACAKLHSMVHANLCLDLMDSRMVGKNEVTYTELLKLAVWQKNLSAV 212
+YP + +N + +K + + M K+ TY+ L+ N+
Sbjct: 250 SVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKA 309
Query: 213 HEIWEDYI-KHYSLSIFSLRKFVWSFTRLRDLKSAYETLQHMVALAMMGKLYINRTSEGR 271
++ + + S+ + + + F R +K + E + M + + N +G
Sbjct: 310 ESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVSYNILIKGL 369
Query: 272 LRSSRLDIPIPL------------------------------NALPVMKVLR-------- 293
L + ++D + AL VM+ +
Sbjct: 370 LENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDV 429
Query: 294 WSFSDVIHACGRTQNSGLAEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRGLRNGMEVLKI 353
++++ +I + + A L+ +M G++ +SH + I ++ D L L+
Sbjct: 430 YAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLRE 489
Query: 354 MQQNNLKPQDSTIATLSVECSKALELDLAEALLDQISRCTNPKPFSAFLAACDTMDKPER 413
M +N +P + L KA + A A + ++
Sbjct: 490 MGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEM------------------------ 525
Query: 414 AIKIFAKMRQKLRPDIRTYELLFSLF---GNVNAPYEEGNMFSQVDSAKRINAIEMDMAR 470
+ +PD++TY +L ++ E + F Q + +E D+
Sbjct: 526 -------LENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQ-------SGLETDVMM 571
Query: 471 NNIQHSHISMKNLLKALGAEGMIRELIQYFCDSKTPLGTP---TYNTVLHSLVEAQESHR 527
+NI L+ L + G + + + + + T TYNT++ + +S+R
Sbjct: 572 HNI---------LIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNR 622
Query: 528 AMEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASALVSMMVRDGFYPQTMTYTALIK 587
A I+ M G+ P+ +YN ++ + R A G +P T+ L++
Sbjct: 623 ATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVR 682
Query: 588 ILLD 591
+++
Sbjct: 683 AVVN 686
Score = 48.1 bits (113), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 73/162 (45%), Gaps = 4/162 (2%)
Query: 511 TYNTVLHSLVEAQESHRAMEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKS--ASALVS 568
+YN ++ L +A + A K+M G P+ TY+I++ C + R K A L
Sbjct: 501 SYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILL--CGLCRDRKIDLALELWH 558
Query: 569 MMVRDGFYPQTMTYTALIKILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILKKACEKG 628
++ G M + LI L G D+A+ ++ + +++ YNT+++ + G
Sbjct: 559 QFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVG 618
Query: 629 RIDVIEFIIEQMHQNKVQPDPSTCHFVFSGYVNCGFHNSAME 670
+ I M++ +QPD + + + G C + AME
Sbjct: 619 DSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAME 660
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 88/200 (44%), Gaps = 7/200 (3%)
Query: 467 DMARNNIQHSHISMKNLLKALGAEGMIRE---LIQYFCDSKTPLGTPTYNTVLHSLVEAQ 523
+M +N + + +S L+ L G E ++ ++ TY+ +L L +
Sbjct: 489 EMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDR 548
Query: 524 ESHRAMEIFKQMKTCGIPPNAATYNIMI-DCCSIIRCFKSASALVSMMVRDGFYPQTMTY 582
+ A+E++ Q G+ + +NI+I CS+ + + + + +M R+ +TY
Sbjct: 549 KIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRN-CTANLVTY 607
Query: 583 TALIKILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILKKACE-KGRIDVIEFIIEQMH 641
L++ GD + A + + G+ D++ YNTI+K C +G +EF +
Sbjct: 608 NTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEF-FDDAR 666
Query: 642 QNKVQPDPSTCHFVFSGYVN 661
+ + P T + + VN
Sbjct: 667 NHGIFPTVYTWNILVRAVVN 686
Score = 35.4 bits (80), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/112 (18%), Positives = 48/112 (42%)
Query: 574 GFYPQTMTYTALIKILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILKKACEKGRIDVI 633
G P +Y L+ ++ + + +L G+ ++ YN ++K +C+K +
Sbjct: 109 GCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKA 168
Query: 634 EFIIEQMHQNKVQPDPSTCHFVFSGYVNCGFHNSAMEALQVLSMRMLCEEVS 685
++ M + +PD + V + G + A+E +S R + +V+
Sbjct: 169 RGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVT 220
>sp|Q0WKZ3|PP105_ARATH Pentatricopeptide repeat-containing protein At1g64580
OS=Arabidopsis thaliana GN=At1g64580 PE=2 SV=1
Length = 523
Score = 87.4 bits (215), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 144/344 (41%), Gaps = 22/344 (6%)
Query: 312 AEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRGLRNGMEVLKIMQQNNLKPQDSTIATLSV 371
A L+ M G P+ Y+ I + +R L N +EV M++ ++ T TL
Sbjct: 168 AVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLIS 227
Query: 372 ECSKALE-LDLAEALLDQISRCTNPKPFSAFLAACDTMDKPE---RAIKIFAKM-RQKLR 426
S + D A L D + R +P F A DT K A ++ +M R+ +
Sbjct: 228 GLSNSGRWTDAARLLRDMVKRKIDPNVI-FFTALIDTFVKEGNLLEARNLYKEMIRRSVV 286
Query: 427 PDIRTYELLFSLFGNVNAPYEEGNMFSQVDSAKRINAIEMDMARNNIQHSHISMKNLLKA 486
P++ TY L + F + MF + S + ++ L+
Sbjct: 287 PNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDV-------------VTYNTLITG 333
Query: 487 LGAEGMIRELIQYFCD--SKTPLGTP-TYNTVLHSLVEAQESHRAMEIFKQMKTCGIPPN 543
+ + ++ FC+ + +G TYNT++H +A + + A ++F +M CG+ P+
Sbjct: 334 FCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPD 393
Query: 544 AATYNIMIDCCSIIRCFKSASALVSMMVRDGFYPQTMTYTALIKILLDYGDFDEALNLLD 603
TYNI++DC + A +V + + +TY +I+ L EA L
Sbjct: 394 IVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFR 453
Query: 604 LVSLEGIPHDVLLYNTILKKACEKGRIDVIEFIIEQMHQNKVQP 647
++ +G+ D + Y T++ C KG + + +M ++ P
Sbjct: 454 SLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMP 497
Score = 71.2 bits (173), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 93/211 (44%), Gaps = 13/211 (6%)
Query: 462 NAIEM--DMARNNIQHSHISMKNLLKALGAEG-------MIRELIQYFCDSKTPLGTPTY 512
NA+E+ M + I+ ++ L+ L G ++R++++ D +
Sbjct: 202 NALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIF----F 257
Query: 513 NTVLHSLVEAQESHRAMEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASALVSMMVR 572
++ + V+ A ++K+M + PN TYN +I+ I C A + +MV
Sbjct: 258 TALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVS 317
Query: 573 DGFYPQTMTYTALIKILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILKKACEKGRIDV 632
G +P +TY LI ++ + L ++ +G+ D YNT++ C+ G+++V
Sbjct: 318 KGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNV 377
Query: 633 IEFIIEQMHQNKVQPDPSTCHFVFSGYVNCG 663
+ + +M V PD T + + N G
Sbjct: 378 AQKVFNRMVDCGVSPDIVTYNILLDCLCNNG 408
Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 91/196 (46%), Gaps = 5/196 (2%)
Query: 468 MARNNIQHSHISMKNLLKALGAEGMIRELIQYFCDSKTPLG----TPTYNTVLHSLVEAQ 523
M + + S +++ +LL +E + DS G YNTV++ L + +
Sbjct: 140 MMKLGFRPSIVTLGSLLNGFCQGNRFQEAVS-LVDSMDGFGFVPNVVIYNTVINGLCKNR 198
Query: 524 ESHRAMEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASALVSMMVRDGFYPQTMTYT 583
+ + A+E+F M+ GI +A TYN +I S + A+ L+ MV+ P + +T
Sbjct: 199 DLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFT 258
Query: 584 ALIKILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILKKACEKGRIDVIEFIIEQMHQN 643
ALI + G+ EA NL + + +V YN+++ C G + +++ + M
Sbjct: 259 ALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSK 318
Query: 644 KVQPDPSTCHFVFSGY 659
PD T + + +G+
Sbjct: 319 GCFPDVVTYNTLITGF 334
Score = 54.7 bits (130), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 97/249 (38%), Gaps = 17/249 (6%)
Query: 414 AIKIFAKMRQK-LRPDIRTYELLFSLFGNVNAPYEEGNMFSQVDSAKRINAIEMDMARNN 472
A+++F M +K +R D TY L S N D+A+ + DM +
Sbjct: 203 ALEVFYCMEKKGIRADAVTYNTLISGLSNSG---------RWTDAARLLR----DMVKRK 249
Query: 473 IQHSHISMKNLLKALGAEGMI---RELIQYFCDSKTPLGTPTYNTVLHSLVEAQESHRAM 529
I + I L+ EG + R L + TYN++++ A
Sbjct: 250 IDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAK 309
Query: 530 EIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASALVSMMVRDGFYPQTMTYTALIKIL 589
+F M + G P+ TYN +I + + L M G TY LI
Sbjct: 310 YMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGY 369
Query: 590 LDYGDFDEALNLLDLVSLEGIPHDVLLYNTILKKACEKGRIDVIEFIIEQMHQNKVQPDP 649
G + A + + + G+ D++ YN +L C G+I+ ++E + ++++ D
Sbjct: 370 CQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDI 429
Query: 650 STCHFVFSG 658
T + + G
Sbjct: 430 ITYNIIIQG 438
Score = 50.8 bits (120), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 83/184 (45%), Gaps = 3/184 (1%)
Query: 500 FCDSKTPLGTPT---YNTVLHSLVEAQESHRAMEIFKQMKTCGIPPNAATYNIMIDCCSI 556
FC+ P+ + VL + + + + ++ +M+ GI + ++ I+I C
Sbjct: 67 FCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCR 126
Query: 557 IRCFKSASALVSMMVRDGFYPQTMTYTALIKILLDYGDFDEALNLLDLVSLEGIPHDVLL 616
A AL+ M++ GF P +T +L+ F EA++L+D + G +V++
Sbjct: 127 CSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVI 186
Query: 617 YNTILKKACEKGRIDVIEFIIEQMHQNKVQPDPSTCHFVFSGYVNCGFHNSAMEALQVLS 676
YNT++ C+ ++ + M + ++ D T + + SG N G A L+ +
Sbjct: 187 YNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMV 246
Query: 677 MRML 680
R +
Sbjct: 247 KRKI 250
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/225 (20%), Positives = 89/225 (39%), Gaps = 8/225 (3%)
Query: 511 TYNTVLHSLVEAQESHRAMEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASALVSMM 570
T ++L+ + A+ + M G PN YN +I+ R +A + M
Sbjct: 151 TLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCM 210
Query: 571 VRDGFYPQTMTYTALIKILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILKKACEKGRI 630
+ G +TY LI L + G + +A LL + I +V+ + ++ ++G +
Sbjct: 211 EKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNL 270
Query: 631 DVIEFIIEQMHQNKVQPDPSTCHFVFSGYVNCGFHNSAMEALQVLSMRMLCEEVSTLEEK 690
+ ++M + V P+ T + + +G+ G A ++ + +V T
Sbjct: 271 LEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTL 330
Query: 691 RSDFEDLILAEDSEAESRILQFCEDSNENL---AFTAALLQLRWC 732
+ F + E + FCE + + L AFT L +C
Sbjct: 331 ITGF-----CKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYC 370
Score = 40.0 bits (92), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 63/373 (16%), Positives = 141/373 (37%), Gaps = 50/373 (13%)
Query: 128 MMQALCKGGYLEEASNLIYFLGERYGIYPILPVYNSFLGACAKLHSMVHANLCLDLMDSR 187
++ C+G +EA +L+ + + +G P + +YN+ + K + +A M+ +
Sbjct: 155 LLNGFCQGNRFQEAVSLVDSM-DGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKK 213
Query: 188 MVGKNEVTYTELLKLAVWQKNLSAVHEIWEDYIKH-YSLSIFSLRKFVWSFTRLRDLKSA 246
+ + VTY L+ + + D +K ++ + +F + +L A
Sbjct: 214 GIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEA 273
Query: 247 YETLQHMVALAMMGKLYINRTSEGRLRSSRLDIPIPLNALPVMKVLRWSFSDVIHACGRT 306
+ M+ +++ ++ + +N IH C
Sbjct: 274 RNLYKEMIRRSVVPNVFTYNS--------------LINGF------------CIHGC--- 304
Query: 307 QNSGLAEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRGLRNGMEVLKIMQQNNLKPQDSTI 366
G A+ + M S G P TY+ I + + +GM++ M L T
Sbjct: 305 --LGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTY 362
Query: 367 ATLSVECSKALELDLAEALLDQISRCTNPKPFSAFLAACDTM---DKPERAIKIFAKMRQ 423
TL +A +L++A+ + +++ C + D + K E+A+ + +++
Sbjct: 363 NTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQK 422
Query: 424 -KLRPDIRTYELLFSLFGNVNAPYEEGNMFSQVDSAKRINAIEMDMARNNIQHSHISMKN 482
++ DI TY ++ +G + D K + + R ++ I+
Sbjct: 423 SEMDVDIITYNIII-----------QG--LCRTDKLKEAWCLFRSLTRKGVKPDAIAYIT 469
Query: 483 LLKALGAEGMIRE 495
++ L +G+ RE
Sbjct: 470 MISGLCRKGLQRE 482
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 87.0 bits (214), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/338 (21%), Positives = 150/338 (44%), Gaps = 20/338 (5%)
Query: 318 QMQSLGLQPSSHTYDGFIRAIVSDRGLRNGMEVLKIMQQNNLKPQDSTIATL-SVECSKA 376
QM +G +P+ Y+ I + + + N +++L M+++ + P T +L S CS
Sbjct: 176 QMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSG 235
Query: 377 LELDLAEALLDQISRCTNPK--PFSAFLAACDTMDKPERAIKIFAKM-RQKLRPDIRTYE 433
D + R P F+A + AC + A + + +M R+ L PDI TY
Sbjct: 236 RWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYS 295
Query: 434 LLFSLFGNVNAPYEEGNMFSQVDSAKRINAIEMDMARNNIQHSHISMKNLLKALGAEGMI 493
LL ++G M+S++D A+ + M ++ L+ +
Sbjct: 296 LL--IYGLC--------MYSRLDEAEEMFGF---MVSKGCFPDVVTYSILINGYCKSKKV 342
Query: 494 RELIQYFCD---SKTPLGTPTYNTVLHSLVEAQESHRAMEIFKQMKTCGIPPNAATYNIM 550
++ FC+ T TY ++ A + + A EIF++M CG+ PN TYN++
Sbjct: 343 EHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVL 402
Query: 551 IDCCSIIRCFKSASALVSMMVRDGFYPQTMTYTALIKILLDYGDFDEALNLLDLVSLEGI 610
+ + A +++ M ++G +TY +I+ + G+ +A ++ ++ +G+
Sbjct: 403 LHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGL 462
Query: 611 PHDVLLYNTILKKACEKGRIDVIEFIIEQMHQNKVQPD 648
D+ Y T++ +KG + + +M ++ + P+
Sbjct: 463 MPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 70/148 (47%)
Query: 511 TYNTVLHSLVEAQESHRAMEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASALVSMM 570
T+ ++L+ + A+ +F QM G PN YN +ID + +A L++ M
Sbjct: 153 TFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRM 212
Query: 571 VRDGFYPQTMTYTALIKILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILKKACEKGRI 630
+DG P +TY +LI L G + +A ++ ++ I DV +N ++ ++GR+
Sbjct: 213 EKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRV 272
Query: 631 DVIEFIIEQMHQNKVQPDPSTCHFVFSG 658
E E+M + + PD T + G
Sbjct: 273 SEAEEFYEEMIRRSLDPDIVTYSLLIYG 300
Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 72/149 (48%), Gaps = 2/149 (1%)
Query: 512 YNTVLHSLVEAQESHRAMEIFKQMKTCGIPPNAATYNIMID-CCSIIRCFKSASALVSMM 570
YNT++ L ++++ A+++ +M+ GI P+ TYN +I CS R + A+ +VS M
Sbjct: 189 YNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGR-WSDATRMVSCM 247
Query: 571 VRDGFYPQTMTYTALIKILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILKKACEKGRI 630
+ YP T+ ALI + G EA + + + D++ Y+ ++ C R+
Sbjct: 248 TKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRL 307
Query: 631 DVIEFIIEQMHQNKVQPDPSTCHFVFSGY 659
D E + M PD T + +GY
Sbjct: 308 DEAEEMFGFMVSKGCFPDVVTYSILINGY 336
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 78/377 (20%), Positives = 146/377 (38%), Gaps = 24/377 (6%)
Query: 296 FSDVIHACGRTQNSGLAEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRGLRNGMEVLKIMQ 355
FS ++ A + + + L QMQ LG+ + T + + L + L M
Sbjct: 84 FSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMI 143
Query: 356 QNNLKPQDSTIATLSVECSKALELDLAEALLDQISRCTNPKPFSAFLAACDTMDKPER-- 413
+ +P T +L + + A + DQ+ + D + K ++
Sbjct: 144 KLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVD 203
Query: 414 -AIKIFAKM-RQKLRPDIRTYELLFSLFGNVNAPYEEGNMFSQVDSAKRINAIEMD--MA 469
A+ + +M + + PD+ TY L S S + +A M M
Sbjct: 204 NALDLLNRMEKDGIGPDVVTYNSLIS---------------GLCSSGRWSDATRMVSCMT 248
Query: 470 RNNIQHSHISMKNLLKALGAEGMIRELIQYFCDSKTPLGTP---TYNTVLHSLVEAQESH 526
+ I + L+ A EG + E +++ + P TY+ +++ L
Sbjct: 249 KREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLD 308
Query: 527 RAMEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASALVSMMVRDGFYPQTMTYTALI 586
A E+F M + G P+ TY+I+I+ + + L M + G T+TYT LI
Sbjct: 309 EAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILI 368
Query: 587 KILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILKKACEKGRIDVIEFIIEQMHQNKVQ 646
+ G + A + + G+ +++ YN +L C+ G+I+ I+ M +N +
Sbjct: 369 QGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMD 428
Query: 647 PDPSTCHFVFSGYVNCG 663
D T + + G G
Sbjct: 429 ADIVTYNIIIRGMCKAG 445
Score = 60.1 bits (144), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 78/347 (22%), Positives = 133/347 (38%), Gaps = 31/347 (8%)
Query: 344 LRNGMEVLKI---------MQQNNLKPQDSTIATLSVECSKALELDLAEALLDQISRCTN 394
LRNG+ +K+ M Q P + + L SK + D+ L +Q+
Sbjct: 53 LRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGI 112
Query: 395 PKPFSAFLAACDTM-------DKPERAIKIFAKM-RQKLRPDIRTYELLFSLFGNVNAPY 446
P L C+ + + A+ KM + P I T+ L + F + Y
Sbjct: 113 PHN----LCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVY 168
Query: 447 EEGNMFSQVDSAKRINAIEMDMARNNIQHSHISMKNLLKALGAEGMIRELIQYFCDSKTP 506
+ MF Q+ + M N + ++ I + L K+ + + L + D P
Sbjct: 169 DALYMFDQM--------VGMGYKPNVVIYNTI-IDGLCKSKQVDNALDLLNRMEKDGIGP 219
Query: 507 LGTPTYNTVLHSLVEAQESHRAMEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASAL 566
TYN+++ L + A + M I P+ T+N +ID C A
Sbjct: 220 -DVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEF 278
Query: 567 VSMMVRDGFYPQTMTYTALIKILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILKKACE 626
M+R P +TY+ LI L Y DEA + + +G DV+ Y+ ++ C+
Sbjct: 279 YEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCK 338
Query: 627 KGRIDVIEFIIEQMHQNKVQPDPSTCHFVFSGYVNCGFHNSAMEALQ 673
+++ + +M Q V + T + GY G N A E +
Sbjct: 339 SKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFR 385
Score = 56.6 bits (135), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 86/197 (43%), Gaps = 6/197 (3%)
Query: 495 ELIQYFCDSKTPLGTP----TYNTVLHSLVEAQESHRAMEIFKQMKTCGIPPNAATYNIM 550
+++ Y + LG P T N +L+ + A+ +M G P+ T+ +
Sbjct: 98 DVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSL 157
Query: 551 IDC-CSIIRCFKSASALVSMMVRDGFYPQTMTYTALIKILLDYGDFDEALNLLDLVSLEG 609
++ C R + A + MV G+ P + Y +I L D AL+LL+ + +G
Sbjct: 158 LNGFCRGDRVY-DALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDG 216
Query: 610 IPHDVLLYNTILKKACEKGRIDVIEFIIEQMHQNKVQPDPSTCHFVFSGYVNCGFHNSAM 669
I DV+ YN+++ C GR ++ M + ++ PD T + + V G + A
Sbjct: 217 IGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAE 276
Query: 670 EALQVLSMRMLCEEVST 686
E + + R L ++ T
Sbjct: 277 EFYEEMIRRSLDPDIVT 293
Score = 49.7 bits (117), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 85/396 (21%), Positives = 158/396 (39%), Gaps = 34/396 (8%)
Query: 2 YRPLLRT--RFQLIADSFCKSKFHKHERRNVANKLELSRTLT--TTMGLNEESISKATQM 57
YR +LR RF + DS FH + R + + + SR L+ + M + I QM
Sbjct: 49 YREMLRNGIRFMKLDDSL-DLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQM 107
Query: 58 Q-------------IVDALCR-GERSRASHLLLNLGHAHHSLGADDFFHILN-YCA--RS 100
Q +++ CR + S A L + H F +LN +C R
Sbjct: 108 QMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRV 167
Query: 101 PDPLFVMETWRMMEEKEIGLNNKCYLLMMQALCKGGYLEEASNLIYFLGERYGIYPILPV 160
D L++ + M K N Y ++ LCK ++ A +L+ + E+ GI P +
Sbjct: 168 YDALYMFDQMVGMGYKP---NVVIYNTIIDGLCKSKQVDNALDLLNRM-EKDGIGPDVVT 223
Query: 161 YNSFLGACAKLHSMVHANLCLDLMDSRMVGKNEVTYTELLKLAVWQKNLSAVHEIWEDYI 220
YNS + A + M R + + T+ L+ V + +S E +E+ I
Sbjct: 224 YNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMI 283
Query: 221 KH-YSLSIFSLRKFVWSFTRLRDLKSAYETLQHMVALAMMGKLYINRT-SEGRLRSSRLD 278
+ I + ++ L A E MV+ + G +S +++
Sbjct: 284 RRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVE 343
Query: 279 IPIPLNA-LPVMKVLR--WSFSDVIHACGRTQNSGLAEQLMLQMQSLGLQPSSHTYDGFI 335
+ L + V+R +++ +I R +AE++ +M G+ P+ TY+ +
Sbjct: 344 HGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLL 403
Query: 336 RAIVSDRGLRNGMEVLKIMQQNNLKPQDSTIATLSV 371
+ + + + +L MQ+N + D+ I T ++
Sbjct: 404 HGLCDNGKIEKALVILADMQKNGM---DADIVTYNI 436
Score = 41.2 bits (95), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 100/258 (38%), Gaps = 22/258 (8%)
Query: 294 WSFSDVIHACGRTQNSGLAEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRGLRNGMEVLKI 353
++F+ +I AC + AE+ +M L P TY I + L E+
Sbjct: 257 FTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGF 316
Query: 354 MQQNNLKPQDSTIATLSVECSKALELDLAEALLDQISR---CTNPKPFSAFLAACDTMDK 410
M P T + L K+ +++ L ++S+ N ++ + K
Sbjct: 317 MVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGK 376
Query: 411 PERAIKIFAKMR-QKLRPDIRTYE-LLFSLFGNVNAPYEEGNMFSQVDSAKRINAIEMDM 468
A +IF +M + P+I TY LL L N +++ A I A DM
Sbjct: 377 LNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDN-----------GKIEKALVILA---DM 422
Query: 469 ARNNIQHSHISMKNLLKALGAEGMIRELIQYFCDSKTPLGTP---TYNTVLHSLVEAQES 525
+N + ++ +++ + G + + +C P TY T++ L +
Sbjct: 423 QKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLR 482
Query: 526 HRAMEIFKQMKTCGIPPN 543
A +F++MK GI PN
Sbjct: 483 READALFRKMKEDGILPN 500
>sp|Q9SFV9|PP218_ARATH Pentatricopeptide repeat-containing protein At3g07290,
mitochondrial OS=Arabidopsis thaliana GN=At3g07290 PE=2
SV=1
Length = 880
Score = 87.0 bits (214), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 81/374 (21%), Positives = 156/374 (41%), Gaps = 20/374 (5%)
Query: 312 AEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRGLRNGMEVLKIMQQNNLKPQDSTI-ATLS 370
A L +M G +P+ HTY I + D + V + M ++ + P T A ++
Sbjct: 320 AFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALIN 379
Query: 371 VECSKALELDLAEALLDQISRCTNP--KPFSAFLAACDTMDKPERAIKIFAKM-RQKLRP 427
C + E L R P + F+ + + KP +A+ + +M L P
Sbjct: 380 GYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSP 439
Query: 428 DIRTYELLFSLFGNVNAPYEEGNMFSQVDSAKRINAIEMDMARNNIQHSHISMKNLLKAL 487
DI +Y +L ++ EG+M + +N + I+ ++ ++ A
Sbjct: 440 DIVSYNVL------IDGLCREGHMNTAYKLLSSMNCFD-------IEPDCLTFTAIINAF 486
Query: 488 GAEG---MIRELIQYFCDSKTPLGTPTYNTVLHSLVEAQESHRAMEIFKQMKTCGIPPNA 544
+G + + L T T++ + + ++ A+ I + + I
Sbjct: 487 CKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTP 546
Query: 545 ATYNIMIDCCSIIRCFKSASALVSMMVRDGFYPQTMTYTALIKILLDYGDFDEALNLLDL 604
+ N+++D S K A++ + + G P +TYT L+ L+ GD + +L+L
Sbjct: 547 HSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILEL 606
Query: 605 VSLEGIPHDVLLYNTILKKACEKGRIDVIEFIIEQMHQNKVQPDPSTCHFVFSGYVNCGF 664
+ L G +V Y I+ C+ GR++ E ++ M + V P+ T + GYVN G
Sbjct: 607 MKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGK 666
Query: 665 HNSAMEALQVLSMR 678
+ A+E ++ + R
Sbjct: 667 LDRALETVRAMVER 680
Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 77/164 (46%), Gaps = 3/164 (1%)
Query: 528 AMEIFKQM-KTCGIPPNAATYNIMI-DCCSIIRCFKSASALVSMMVRDGFYPQTMTYTAL 585
A+++F M K PN+ +Y+I+I C + R + A L M G P T TYT L
Sbjct: 249 ALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGR-LEEAFGLKDQMGEKGCQPSTRTYTVL 307
Query: 586 IKILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILKKACEKGRIDVIEFIIEQMHQNKV 645
IK L D G D+A NL D + G +V Y ++ C G+I+ + +M ++++
Sbjct: 308 IKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRI 367
Query: 646 QPDPSTCHFVFSGYVNCGFHNSAMEALQVLSMRMLCEEVSTLEE 689
P T + + +GY G A E L V+ R V T E
Sbjct: 368 FPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNE 411
Score = 63.5 bits (153), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 74/164 (45%)
Query: 509 TPTYNTVLHSLVEAQESHRAMEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASALVS 568
T TY ++ +L + +A +F +M G PN TY ++ID + A+ +
Sbjct: 301 TRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCR 360
Query: 569 MMVRDGFYPQTMTYTALIKILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILKKACEKG 628
MV+D +P +TY ALI G A LL ++ +V +N +++ C G
Sbjct: 361 KMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVG 420
Query: 629 RIDVIEFIIEQMHQNKVQPDPSTCHFVFSGYVNCGFHNSAMEAL 672
+ ++++M N + PD + + + G G N+A + L
Sbjct: 421 KPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLL 464
Score = 53.1 bits (126), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 67/163 (41%)
Query: 511 TYNTVLHSLVEAQESHRAMEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASALVSMM 570
+Y+ ++H L E A + QM G P+ TY ++I A L M
Sbjct: 268 SYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEM 327
Query: 571 VRDGFYPQTMTYTALIKILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILKKACEKGRI 630
+ G P TYT LI L G +EA + + + I V+ YN ++ C+ GR+
Sbjct: 328 IPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRV 387
Query: 631 DVIEFIIEQMHQNKVQPDPSTCHFVFSGYVNCGFHNSAMEALQ 673
++ M + +P+ T + + G G A+ L+
Sbjct: 388 VPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLK 430
Score = 42.7 bits (99), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 103/513 (20%), Positives = 188/513 (36%), Gaps = 40/513 (7%)
Query: 59 IVDALCRGERSRASHL----LLNLGHAHHSLGADDFFHILNYC--ARSPDPLFVMETWRM 112
IV+ALC+ + A+ + +L +G S +L +C D L V + M
Sbjct: 201 IVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSL--LLGFCRGLNLRDALKVFDV--M 256
Query: 113 MEEKEIGLNNKCYLLMMQALCKGGYLEEASNLIYFLGERYGIYPILPVYNSFLGACAKLH 172
+E N+ Y +++ LC+ G LEEA L +GE+ G P Y + A
Sbjct: 257 SKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEK-GCQPSTRTYTVLIKALCDRG 315
Query: 173 SMVHANLCLDLMDSRMVGKNEVTYTELLKLAVWQKNLSAVHEIWEDYIKHYSL-SIFSLR 231
+ A D M R N TYT L+ + + + +K S+ +
Sbjct: 316 LIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYN 375
Query: 232 KFVWSFTRLRDLKSAYETLQHMVALAMMGKL-YINRTSEGRLRSSRLDIPIPLNALPVMK 290
+ + + + A+E L M A + N EG R + P A+ ++K
Sbjct: 376 ALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGK-----PYKAVHLLK 430
Query: 291 VLR--------WSFSDVIHACGRTQNSGLAEQLMLQMQSLGLQPSSHTYDGFIRAIVSDR 342
+ S++ +I R + A +L+ M ++P T+ I A
Sbjct: 431 RMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQG 490
Query: 343 GLRNGMEVLKIMQQNNLKPQDSTIATLSVECSKALELDLAEALLDQISR---CTNPKPFS 399
L +M + + + T TL K + A +L+ + + T P +
Sbjct: 491 KADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLN 550
Query: 400 AFLAACDTMDKPERAIKIFAKMRQ-KLRPDIRTYELLFSLFGNVNAPYEEGNMFSQVDSA 458
L K + + + K+ + L P + TY L V+ G++ S
Sbjct: 551 VILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTL------VDGLIRSGDI---TGSF 601
Query: 459 KRINAIEMDMARNNIQHSHISMKNLLKALGAEGMIRELIQYFCDSKTPLGTPTYNTVLHS 518
+ + +++ N+ + + + N L G +L+ DS TY ++
Sbjct: 602 RILELMKLSGCLPNV-YPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKG 660
Query: 519 LVEAQESHRAMEIFKQMKTCGIPPNAATYNIMI 551
V + RA+E + M G N Y+ ++
Sbjct: 661 YVNNGKLDRALETVRAMVERGYELNDRIYSSLL 693
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 86.7 bits (213), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 94/433 (21%), Positives = 176/433 (40%), Gaps = 27/433 (6%)
Query: 266 RTSEGRLRSSRLDIPIPL-----NALPVMKVLRWSFSDVIHACGRTQNSGLAEQLMLQMQ 320
R S+ RLR +L+ I L + P ++ F+ ++ A + + + L +M+
Sbjct: 55 RLSKTRLRDIKLNDAIDLFSDMVKSRPFPSIV--DFNRLLSAIVKLKKYDVVISLGKKME 112
Query: 321 SLGLQPSSHTYDGFIRAIVSDRGLRNGMEVLKIMQQNNLKPQDSTIATLSVECSKALELD 380
LG++ +T++ I + + +L M + +P TI +L + +
Sbjct: 113 VLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVS 172
Query: 381 LAEALLDQISRCTNPKPFSAFLAACDTMDKPER---AIKIFAKM-RQKLRPDIRTYELLF 436
A +L+D++ A+ A D++ K +R A F ++ R+ +RP++ TY L
Sbjct: 173 DAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALV 232
Query: 437 SLFGNVNAPYEEGNMFSQVDSAKRINAIEMDMARNNIQHSHISMKNLLKALGAEGMI--- 493
+ N + + + S DM + I + I+ LL A G +
Sbjct: 233 NGLCNSSRWSDAARLLS-------------DMIKKKITPNVITYSALLDAFVKNGKVLEA 279
Query: 494 RELIQYFCDSKTPLGTPTYNTVLHSLVEAQESHRAMEIFKQMKTCGIPPNAATYNIMIDC 553
+EL + TY+++++ L A ++F M + G + +YN +I+
Sbjct: 280 KELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLING 339
Query: 554 CSIIRCFKSASALVSMMVRDGFYPQTMTYTALIKILLDYGDFDEALNLLDLVSLEGIPHD 613
+ + L M + G T+TY LI+ GD D+A + GI D
Sbjct: 340 FCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPD 399
Query: 614 VLLYNTILKKACEKGRIDVIEFIIEQMHQNKVQPDPSTCHFVFSGYVNCGFHNSAMEALQ 673
+ YN +L C+ G ++ I E M + ++ D T V G G A
Sbjct: 400 IWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFC 459
Query: 674 VLSMRMLCEEVST 686
LS++ L ++ T
Sbjct: 460 SLSLKGLKPDIVT 472
Score = 36.2 bits (82), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 76/424 (17%), Positives = 145/424 (34%), Gaps = 82/424 (19%)
Query: 128 MMQALCKGGYLEEASNLIYFLGERYGIYPILPVYNSFLGACAKLHSMVHANLCLDLMDSR 187
++ C+ + +A +L+ + E G P + YN+ + + K + A ++ +
Sbjct: 161 LVNGFCRRNRVSDAVSLVDKMVE-IGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERK 219
Query: 188 MVGKNEVTYTELLKLAVWQKNLSAVHEIWEDYI-KHYSLSIFSLRKFVWSFTRLRDLKSA 246
+ N VTYT L+ S + D I K + ++ + + +F + + A
Sbjct: 220 GIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEA 279
Query: 247 YETLQHMVALAMMGKLYINRTSEGRLRSSRLDIPIPLNALPVMKVLRWSFSDVIHACGRT 306
E + MV ++ +D I ++S +I+
Sbjct: 280 KELFEEMVRMS-------------------IDPDIV------------TYSSLINGLCLH 308
Query: 307 QNSGLAEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRGLRNGMEVLKIMQQNNLKPQDSTI 366
A Q+ M S G +Y+ I + + +GM++ + M Q L T
Sbjct: 309 DRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTY 368
Query: 367 ATLSVECSKALELDLAEALLDQISRCTNPKPFSAFLAACDTMDKPERAIKIFAKMR-QKL 425
TL F A D ++A + F++M +
Sbjct: 369 NTL----------------------------IQGFFQAGDV----DKAQEFFSQMDFFGI 396
Query: 426 RPDIRTYELLFSLFGNVNAPYEEGNMFSQVDSAKRINAIEMDMARNNIQHSHISMKNLLK 485
PDI TY +L G + + K + E DM + + ++ +++
Sbjct: 397 SPDIWTYNILL------------GGLCDNGELEKALVIFE-DMQKREMDLDIVTYTTVIR 443
Query: 486 ALGAEGMIRELIQYFCDSKTPLGTP---TYNTVLHSLVEAQESHRAMEIFKQMKTCGIPP 542
+ G + E FC P TY T++ L H ++ +MK G+
Sbjct: 444 GMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMK 503
Query: 543 NAAT 546
N T
Sbjct: 504 NDCT 507
Score = 34.3 bits (77), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 40/191 (20%), Positives = 82/191 (42%), Gaps = 14/191 (7%)
Query: 54 ATQMQIVDALCRGERSRASHLLLNLGHAHHSLGADDFFHIL--NYCA--RSPDPLFVMET 109
T +++ LC +R ++ + +L + L ++ L +C R D M+
Sbjct: 296 VTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDG---MKL 352
Query: 110 WRMMEEKEIGLNNKCYLLMMQALCKGGYLEEASNLIYFLGERYGIYPILPVYNSFLGACA 169
+R M ++ + N Y ++Q + G +++A + + +GI P + YN LG
Sbjct: 353 FREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM-DFFGISPDIWTYNILLGGLC 411
Query: 170 KLHSMVHANLCLDLMDSRMVGKNEVTYTELLKLAVWQKNLSAVHEIWEDYIKHYSLSIFS 229
+ A + + M R + + VTYT +++ V E W + SLS+
Sbjct: 412 DNGELEKALVIFEDMQKREMDLDIVTYTTVIR---GMCKTGKVEEAWSLFC---SLSLKG 465
Query: 230 LRKFVWSFTRL 240
L+ + ++T +
Sbjct: 466 LKPDIVTYTTM 476
>sp|Q0WMY5|PP365_ARATH Pentatricopeptide repeat-containing protein At5g04810,
chloroplastic OS=Arabidopsis thaliana GN=PPR4 PE=1 SV=1
Length = 952
Score = 85.5 bits (210), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 88/463 (19%), Positives = 176/463 (38%), Gaps = 64/463 (13%)
Query: 288 VMKVLRWSFSDVIHACGRTQNSGLAEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRGLRNG 347
+ K R F ++ GR + A + +M++ G+ P+S Y I A R +
Sbjct: 304 ISKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEA 363
Query: 348 MEVLKIMQQNNLKPQDSTIATLSVECSKALELDLAEALLDQ---ISRCTNPKPFSAFL-A 403
+ ++ M++ ++ T + + SKA + A+ D+ I + N + + A
Sbjct: 364 LSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYA 423
Query: 404 ACDT-----------------MDKP-----------------ERAIKIFAKMRQ-KLRPD 428
C T +D P ++ + +F ++++ P
Sbjct: 424 HCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPT 483
Query: 429 IRTYELLFSLFGNVN----------APYEEG------------NMFSQVDSAKRINAIEM 466
+ TY L +L+ V EEG N F ++ A+
Sbjct: 484 VVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFE 543
Query: 467 DMARNNIQHSHISMKNLLKALGAEGMIRELIQYFCDSKTPLGTPTYNT---VLHSLVEAQ 523
DM + ++ I N++ A G + IQ + + PT T ++H ++
Sbjct: 544 DMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSG 603
Query: 524 ESHRAMEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASALVSMMVRDGFYPQTMTYT 583
+ R++E+F M+ CG P T+N +I+ R + A ++ M G TYT
Sbjct: 604 DMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYT 663
Query: 584 ALIKILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILKKACEKGRIDVIEFIIEQMHQN 643
+++ GD +A + EG+ D+ Y +LK C+ GR+ + ++M
Sbjct: 664 KIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSAR 723
Query: 644 KVQPDPSTCHFVFSGYVNCGFHNSAMEALQVLSMRMLCEEVST 686
+ + + + G+ G A + +Q + + ++ T
Sbjct: 724 NIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHT 766
Score = 81.3 bits (199), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 91/399 (22%), Positives = 164/399 (41%), Gaps = 40/399 (10%)
Query: 296 FSDVIHACGRTQNSGLAEQLMLQMQSLGLQPSSHTY----DGFIRAIVSDRGLRNGMEVL 351
+ +I+A +T N AE L+ +M+ G+ Y DG+ +V+D + G+ V
Sbjct: 417 YGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGY--TMVADE--KKGLVVF 472
Query: 352 KIMQQNNLKPQDSTIA------TLSVECSKALELDLAEALLDQISRCTNPKPFSAFLAAC 405
K +++ P T T + SKALE+ ++ + N K +S +
Sbjct: 473 KRLKECGFTPTVVTYGCLINLYTKVGKISKALEVS---RVMKEEGVKHNLKTYSMMINGF 529
Query: 406 DTMDKPERAIKIFAKM-RQKLRPDIRTYELLFSLFGNVNAPYEEGNMFSQVDSAKRINAI 464
+ A +F M ++ ++PD+ Y + S F + GNM + + K + +
Sbjct: 530 VKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGM------GNMDRAIQTVKEMQKL 583
Query: 465 EMDMARNN---IQHSHISMKNLLKALGAEGMIRELIQYFCDSKTPLGTPTYNTVLHSLVE 521
I H + ++ ++L M+R C + T+N +++ LVE
Sbjct: 584 RHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRR-----CGCVPTV--HTFNGLINGLVE 636
Query: 522 AQESHRAMEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASALVSMMVRDGFYPQTMT 581
++ +A+EI +M G+ N TY ++ + + A + + +G T
Sbjct: 637 KRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFT 696
Query: 582 YTALIKILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILKKACEKGRIDVIEFIIEQMH 641
Y AL+K G AL + +S IP + +YN ++ +G + +I+QM
Sbjct: 697 YEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMK 756
Query: 642 QNKVQPDPSTCHFVFSGYVNCGFHNSA------MEALQV 674
+ V+PD T S G N A MEAL V
Sbjct: 757 KEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGV 795
Score = 80.1 bits (196), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 103/232 (44%), Gaps = 10/232 (4%)
Query: 456 DSAKRINAIEMDMARNNIQHSHISMKNLLKALGAEGMIRELIQYFCDSKTPLGTPTYNTV 515
D AKRI+ I ++H N+ +A E ++RE+ + D+ + Y+T+
Sbjct: 403 DEAKRIHKTLNASIYGKIIYAHCQTCNMERA---EALVREMEEEGIDAPIAI----YHTM 455
Query: 516 LHSLVEAQESHRAMEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASALVSMMVRDGF 575
+ + + + +FK++K CG P TY +I+ + + A + +M +G
Sbjct: 456 MDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGV 515
Query: 576 YPQTMTYTALIKILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILKKACEKGRIDVIEF 635
TY+ +I + D+ A + + + EG+ DV+LYN I+ C G +D
Sbjct: 516 KHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQ 575
Query: 636 IIEQMHQNKVQPDPSTCHFVFSGYVNCGFHNSAMEALQVLSMRMLCEEVSTL 687
+++M + + +P T + GY G +L+V M C V T+
Sbjct: 576 TVKEMQKLRHRPTTRTFMPIIHGYAKSG---DMRRSLEVFDMMRRCGCVPTV 624
Score = 67.8 bits (164), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 101/493 (20%), Positives = 188/493 (38%), Gaps = 65/493 (13%)
Query: 120 LNNKCYLLMMQALCKGGYLEEASNLIYFLGERYGIYPILPVYNSFLGACAKLHSMVHANL 179
LN Y ++ A C+ +E A L+ + E GI + +Y++ + + +
Sbjct: 412 LNASIYGKIIYAHCQTCNMERAEALVREM-EEEGIDAPIAIYHTMMDGYTMVADEKKGLV 470
Query: 180 CLDLMDSRMVGKNEVTYTELLKLAVWQKNLSAVHEI----WEDYIKHYSLSIFSLRKFVW 235
+ VTY L+ L +S E+ E+ +KH +L +S+ +
Sbjct: 471 VFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKH-NLKTYSM--MIN 527
Query: 236 SFTRLRDLKSAYETLQHMVALAMMGKLYI-NRTSEGRLRSSRLDIPIPLNALPVMKVLRW 294
F +L+D +A+ + MV M + + N +D I + M+ LR
Sbjct: 528 GFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAI--QTVKEMQKLRH 585
Query: 295 -----SFSDVIHACGRTQNSGLAEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRGLRNGME 349
+F +IH ++ + + ++ M+ G P+ HT++G I +V R + +E
Sbjct: 586 RPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVE 645
Query: 350 VLKIMQQNNLKPQDSTIATLSVECSKALELDLAEALLDQISRCTNPKPFSAFLAACDTMD 409
+L M T+A +S N ++ + ++
Sbjct: 646 ILDEM----------TLAGVSA----------------------NEHTYTKIMQGYASVG 673
Query: 410 KPERAIKIFAKMR-QKLRPDIRTYELLFSLFGNVNAPYEEGNMFSQVDSAKRINAIEMDM 468
+A + F +++ + L DI TYE L + A + G M S + A+ +M
Sbjct: 674 DTGKAFEYFTRLQNEGLDVDIFTYEAL------LKACCKSGRMQSAL-------AVTKEM 720
Query: 469 ARNNIQHSHISMKNLLKALGAEGMIRE---LIQYFCDSKTPLGTPTYNTVLHSLVEAQES 525
+ NI + L+ G + E LIQ TY + + + +A +
Sbjct: 721 SARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDM 780
Query: 526 HRAMEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASALVSMMVRDGFYPQTMTYTAL 585
+RA + ++M+ G+ PN TY +I + + A + M G P Y L
Sbjct: 781 NRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCL 840
Query: 586 IKILLDYGDFDEA 598
+ LL EA
Sbjct: 841 LTSLLSRASIAEA 853
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 81/179 (45%), Gaps = 10/179 (5%)
Query: 26 ERRNVANKLELSRTLT-TTMGLNEESISKATQMQIVDALCRGERSRASHLLLNLGHAHHS 84
E+R + +E+ +T + NE + +K Q G+ +A L +
Sbjct: 636 EKRQMEKAVEILDEMTLAGVSANEHTYTKIMQ----GYASVGDTGKAFEYFTRL--QNEG 689
Query: 85 LGADDFFH--ILNYCARSPDPLFVMETWRMMEEKEIGLNNKCYLLMMQALCKGGYLEEAS 142
L D F + +L C +S + + M + I N+ Y +++ + G + EA+
Sbjct: 690 LDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAA 749
Query: 143 NLIYFLGERYGIYPILPVYNSFLGACAKLHSMVHANLCLDLMDSRMVGKNEVTYTELLK 201
+LI + ++ G+ P + Y SF+ AC+K M A ++ M++ V N TYT L+K
Sbjct: 750 DLIQQM-KKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIK 807
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/356 (17%), Positives = 142/356 (39%), Gaps = 40/356 (11%)
Query: 106 VMETWRMMEEKEIGLNNKCYLLMMQALCKGGYLEEASNLIYFLGE--RYGIYPILPVYNS 163
+E R+M+E+ + N K Y +M+ K L++ +N + + G+ P + +YN+
Sbjct: 503 ALEVSRVMKEEGVKHNLKTYSMMINGFVK---LKDWANAFAVFEDMVKEGMKPDVILYNN 559
Query: 164 FLGACAKLHSMVHANLCLDLMDSRMVGKNEVTYTELLKLAVWQKNLSAVHEIWEDYIKHY 223
+ A + +M A + M T+ ++ ++ E++ D ++
Sbjct: 560 IISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVF-DMMRRC 618
Query: 224 SL--SIFSLRKFVWSFTRLRDLKSAYETL-----------QHMVALAMMGKLYINRTSEG 270
++ + + R ++ A E L +H M G + T +
Sbjct: 619 GCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKA 678
Query: 271 -----RLRSSRLDIPIPLNALPVMKVLRWSFSDVIHACGRTQNSGLAEQLMLQMQSLGLQ 325
RL++ LD+ I +++ ++ AC ++ A + +M + +
Sbjct: 679 FEYFTRLQNEGLDVDI------------FTYEALLKACCKSGRMQSALAVTKEMSARNIP 726
Query: 326 PSSHTYDGFIRAIVSDRGLRNGMEVLKIMQQNNLKPQDSTIATLSVECSKALELDLAEAL 385
+S Y+ I + ++++ M++ +KP T + CSKA +++ A
Sbjct: 727 RNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQT 786
Query: 386 LDQISRC---TNPKPFSAFLAACDTMDKPERAIKIFAKMRQ-KLRPDIRTYELLFS 437
++++ N K ++ + PE+A+ + +M+ ++PD Y L +
Sbjct: 787 IEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLT 842
>sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containing protein At5g59900
OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1
Length = 907
Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 116/563 (20%), Positives = 229/563 (40%), Gaps = 45/563 (7%)
Query: 128 MMQALCKGGYLEEASNLIYFLGERYGIYPILPVYNSFLGACAKLHSMVHANLCLDLMDSR 187
+++ L K G +EEA NL+ + + +G+ P L VYN+ + + K A L D M
Sbjct: 338 LVEGLRKRGKIEEALNLVKRVVD-FGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKI 396
Query: 188 MVGKNEVTYTELLKLAVWQKNL-SAVHEIWEDYIKHYSLSIFSLRKFVWSFTRLRDLKSA 246
+ N+VTY+ L+ + + L +A+ + E LS++ + + D+ +A
Sbjct: 397 GLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAA 456
Query: 247 YETLQHMV------ALAMMGKLYINRTSEGRLRSSRLDIPIPLNALPVMKVLRWSFSDVI 300
+ M+ + L S+G++ + L + + + + ++F+ ++
Sbjct: 457 EGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKA-LRLYHEMTGKGIAPSI-YTFTTLL 514
Query: 301 HACGRTQNSGLAEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRGLRNGMEVLKIMQQNNLK 360
R A +L +M ++P+ TY+ I + + E LK M + +
Sbjct: 515 SGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIV 574
Query: 361 PQDSTIATLSVECSKALELDLAEALLDQISRCT---NPKPFSAFLAACDTMDKPERAIKI 417
P + L + A+ +D + + N ++ L K E A+ +
Sbjct: 575 PDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSV 634
Query: 418 FAKMRQK-LRPDIRTYELLFS----------LFGNVNAPYEEG------------NMFSQ 454
+M Q+ + D+ Y +L FG + ++ G + S+
Sbjct: 635 CQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSK 694
Query: 455 VDSAKRINAIEMDMARNNIQHSHISMKNLLKALGAEGMIRELIQYFCDSKTPLGTP---- 510
K I M + ++ ++ L G + E + C P+ +
Sbjct: 695 TGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNE-AEVLCSKMQPVSSVPNQV 753
Query: 511 TYNTVLHSLVEAQ-ESHRAMEIFKQMKTCGIPPNAATYNIMI-DCCSIIRCFKSASALVS 568
TY L L + + + +A+E+ + G+ N ATYN++I C R + AS L++
Sbjct: 754 TYGCFLDILTKGEVDMQKAVELHNAILK-GLLANTATYNMLIRGFCRQGR-IEEASELIT 811
Query: 569 MMVRDGFYPQTMTYTALIKILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILKKACEKG 628
M+ DG P +TYT +I L D +A+ L + ++ +GI D + YNT++ C G
Sbjct: 812 RMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAG 871
Query: 629 RIDVIEFIIEQMHQNKVQPDPST 651
+ + +M + + P+ T
Sbjct: 872 EMGKATELRNEMLRQGLIPNNKT 894
Score = 77.0 bits (188), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 86/381 (22%), Positives = 150/381 (39%), Gaps = 51/381 (13%)
Query: 295 SFSDVIHACGRTQNSGLAEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRGLRNGMEVLKIM 354
+ S ++H + ++ GLA +L M S+G++P + Y G IR++ + L E++ M
Sbjct: 194 TLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHM 253
Query: 355 QQNNLKPQDSTIATLSVECSKALELDLAEALLDQISRCTNPKPFSAFLAACDTMDKPERA 414
+ D I +V L+D + C K + A D K
Sbjct: 254 EATGC---DVNIVPYNV-------------LIDGL--CKKQKVWEAVGIKKDLAGK---- 291
Query: 415 IKIFAKMRQKLRPDIRTYELLFSLFGNVNAPYEEGNMFSQVDSAKRINAIEM--DMARNN 472
L+PD+ TY L V +E G +EM +M
Sbjct: 292 ---------DLKPDVVTYCTLVYGLCKVQ-EFEIG--------------LEMMDEMLCLR 327
Query: 473 IQHSHISMKNLLKALGAEGMIRE---LIQYFCDSKTPLGTPTYNTVLHSLVEAQESHRAM 529
S ++ +L++ L G I E L++ D YN ++ SL + ++ H A
Sbjct: 328 FSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAE 387
Query: 530 EIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASALVSMMVRDGFYPQTMTYTALIKIL 589
+F +M G+ PN TY+I+ID +A + + MV G Y +LI
Sbjct: 388 LLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGH 447
Query: 590 LDYGDFDEALNLLDLVSLEGIPHDVLLYNTILKKACEKGRIDVIEFIIEQMHQNKVQPDP 649
+GD A + + + + V+ Y +++ C KG+I+ + +M + P
Sbjct: 448 CKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSI 507
Query: 650 STCHFVFSGYVNCGFHNSAME 670
T + SG G A++
Sbjct: 508 YTFTTLLSGLFRAGLIRDAVK 528
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/405 (21%), Positives = 174/405 (42%), Gaps = 28/405 (6%)
Query: 295 SFSDVIHACGRTQNSGLAEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRGLRNGMEVLKIM 354
++ V++ ++ NS LA L +M+ ++ S Y I ++ D + + + M
Sbjct: 212 TYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEM 271
Query: 355 QQNNLKPQDSTIATL-SVECSKALELDLAEALLDQISRCTNPK--PFSAFLAACDTMDKP 411
+ +K T ++L C+ D A+ L + I R P FSA + K
Sbjct: 272 EMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKL 331
Query: 412 ERAIKIFAKM-RQKLRPDIRTYELLFSLFGNVNAPYEEGNMFSQVDSAKRINAIEMDMAR 470
A +++ +M + + PD TY L F N +E MF + S E D+
Sbjct: 332 LEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVS----KGCEPDIVT 387
Query: 471 NNIQ-HSHISMKN------LLKALGAEGMIRELIQYFCDSKTPLGTPTYNTVLHSLVEAQ 523
+I +S+ K L + + ++G+I I TYNT++ ++
Sbjct: 388 YSILINSYCKAKRVDDGMRLFREISSKGLIPNTI-------------TYNTLVLGFCQSG 434
Query: 524 ESHRAMEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASALVSMMVRDGFYPQTMTYT 583
+ + A E+F++M + G+PP+ TY I++D A + M + Y
Sbjct: 435 KLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYN 494
Query: 584 ALIKILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILKKACEKGRIDVIEFIIEQMHQN 643
+I + + D+A +L +S +G+ DV+ YN ++ C+KG + + + +M ++
Sbjct: 495 IIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKED 554
Query: 644 KVQPDPSTCHFVFSGYVNCGFHNSAMEALQVLSMRMLCEEVSTLE 688
PD T + + ++ S++E ++ + + + ST++
Sbjct: 555 GCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIK 599
Score = 76.6 bits (187), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 75/363 (20%), Positives = 156/363 (42%), Gaps = 28/363 (7%)
Query: 322 LGLQPSSHTYDGFIRAIVSDRGLRNGMEVLKIMQQNNLKPQDSTIATLSVECSKALELDL 381
LG +P + T+ + + + + ++ M + +P T++TL +
Sbjct: 134 LGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSE 193
Query: 382 AEALLDQISRCT---NPKPFSAFLAACDTMDKPERAIKIFAKMRQK-LRPDIRTYELLFS 437
A L+D++ + + L A+ +F KM ++ ++ + Y ++
Sbjct: 194 ALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIV-- 251
Query: 438 LFGNVNAPYEEGNMFSQVDSAKRINAIEMDMARNNIQHSHISMKNLLKALGAEG------ 491
+++ ++G S D+ N +EM I+ ++ +L+ L +G
Sbjct: 252 ----IDSLCKDG---SFDDALSLFNEMEM----KGIKADVVTYSSLIGGLCNDGKWDDGA 300
Query: 492 -MIRELIQYFCDSKTPLGTPTYNTVLHSLVEAQESHRAMEIFKQMKTCGIPPNAATYNIM 550
M+RE+I + P T++ ++ V+ + A E++ +M T GI P+ TYN +
Sbjct: 301 KMLREMIGR---NIIP-DVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSL 356
Query: 551 IDCCSIIRCFKSASALVSMMVRDGFYPQTMTYTALIKILLDYGDFDEALNLLDLVSLEGI 610
ID C A+ + +MV G P +TY+ LI D+ + L +S +G+
Sbjct: 357 IDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGL 416
Query: 611 PHDVLLYNTILKKACEKGRIDVIEFIIEQMHQNKVQPDPSTCHFVFSGYVNCGFHNSAME 670
+ + YNT++ C+ G+++ + + ++M V P T + G + G N A+E
Sbjct: 417 IPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALE 476
Query: 671 ALQ 673
+
Sbjct: 477 IFE 479
Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 99/516 (19%), Positives = 205/516 (39%), Gaps = 85/516 (16%)
Query: 54 ATQMQIVDALCRGERSRASHLLLNLGHAHHSLGADDFFH--ILNYCARSPDPLFVMETWR 111
T +++ LC R + +L++ + D+ + +LN +S + ++ +R
Sbjct: 176 VTVSTLINGLCLKGRVSEALVLIDR-MVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFR 234
Query: 112 MMEEKEIGLNNKCYLLMMQALCKGGYLEEASNLIYFLGERYGIYPILPVYNSFLGACAKL 171
MEE+ I + Y +++ +LCK G ++A +L + E GI + Y+S +G
Sbjct: 235 KMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEM-EMKGIKADVVTYSSLIGGLCND 293
Query: 172 HSMVHANLCLDLMDSRMVGKNEVTYTELLKLAVWQKNLSAVHEIWEDYI-KHYSLSIFSL 230
L M R + + VT++ L+ + V + L E++ + I + + +
Sbjct: 294 GKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITY 353
Query: 231 RKFVWSFTRLRDLKSAYETLQHMVALAMMGKLYINRTSEGRLRSSRLDIPIPLNALPVMK 290
+ F + L A + MV+ + DI
Sbjct: 354 NSLIDGFCKENCLHEANQMFDLMVS-----------------KGCEPDI----------- 385
Query: 291 VLRWSFSDVIHACGRTQNSGLAEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRGLRNGMEV 350
++S +I++ + + +L ++ S GL P++ TY+ + L E+
Sbjct: 386 ---VTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKEL 442
Query: 351 LKIMQQNNLKPQDSTIATLSVECSKALELDLAEALLDQISRCTNPKPFSAFLAACDTMDK 410
+ M + P ++ T + LLD + CD +
Sbjct: 443 FQEMVSRGVPP---SVVTYGI-------------LLDGL---------------CDN-GE 470
Query: 411 PERAIKIFAKMRQ-KLRPDIRTYELLFSLFGNVNAPYEEGNMFSQVDSAKRINAIEMDMA 469
+A++IF KM++ ++ I Y ++ + G NA S+VD A ++ ++
Sbjct: 471 LNKALEIFEKMQKSRMTLGIGIYNII--IHGMCNA--------SKVDDAW---SLFCSLS 517
Query: 470 RNNIQHSHISMKNLLKALGAEGMIRELIQYFCDSKTPLGTP---TYNTVLHSLVEAQESH 526
++ ++ ++ L +G + E F K TP TYN ++ + +
Sbjct: 518 DKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLI 577
Query: 527 RAMEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKS 562
++E+ ++MK CG +++T ++ID S R KS
Sbjct: 578 SSVELIEEMKVCGFSADSSTIKMVIDMLSDRRLDKS 613
Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 92/228 (40%), Gaps = 8/228 (3%)
Query: 461 INAIEMDMARNNIQ-HSHISMKNLLKALGAEGMIRELIQYFCDSKTPLGTPTYNTVLHSL 519
+N IE DM I + + K LL A G +L Y D T T++T+++
Sbjct: 98 LNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKL-GYEPD------TITFSTLVNGF 150
Query: 520 VEAQESHRAMEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASALVSMMVRDGFYPQT 579
A+ + +M P+ T + +I+ + A L+ MV GF P
Sbjct: 151 CLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDE 210
Query: 580 MTYTALIKILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILKKACEKGRIDVIEFIIEQ 639
+TY ++ L G+ AL+L + I V+ Y+ ++ C+ G D + +
Sbjct: 211 VTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNE 270
Query: 640 MHQNKVQPDPSTCHFVFSGYVNCGFHNSAMEALQVLSMRMLCEEVSTL 687
M ++ D T + G N G + + L+ + R + +V T
Sbjct: 271 MEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTF 318
>sp|Q9LUR2|PP238_ARATH Putative pentatricopeptide repeat-containing protein At3g16710,
mitochondrial OS=Arabidopsis thaliana GN=At3g16710 PE=3
SV=1
Length = 507
Score = 84.3 bits (207), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/349 (22%), Positives = 149/349 (42%), Gaps = 24/349 (6%)
Query: 312 AEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRGLRNGMEVLKIMQQNNLKPQDSTI-ATLS 370
A L Q+ +G +P+ TY IR + +R L + +E+ M N +P T A ++
Sbjct: 172 AIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVT 231
Query: 371 VECSKALELDLAEALLDQISRCTNPK--PFSAFLAACDTMDKPERAIKIFAKMRQ-KLRP 427
C D A L D + R P F+A + A + K A +++ M Q + P
Sbjct: 232 GLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYP 291
Query: 428 DIRTYELLFSLFGNVNAPYEEGNMFSQVDSAKRINAIEMDMARNNIQHSHISMKNLLKAL 487
D+ TY L + M+ +D A+++ + M RN + + L+
Sbjct: 292 DVFTYGSLINGLC----------MYGLLDEARQMFYL---MERNGCYPNEVIYTTLIHGF 338
Query: 488 GAEGMIRELIQYFCD---SKTPLGTPTYNTVLHSLVEAQESHRAMEIFKQMKTCGIPPNA 544
+ + ++ F + T TY ++ A E+F QM + PP+
Sbjct: 339 CKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDI 398
Query: 545 ATYNIMID--CCSIIRCFKSASALVSMMVRDGFYPQTMTYTALIKILLDYGDFDEALNLL 602
TYN+++D CC+ + A + M + +TYT +I+ + G ++A +L
Sbjct: 399 RTYNVLLDGLCCN--GKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLF 456
Query: 603 DLVSLEGIPHDVLLYNTILKKACEKGRIDVIEFIIEQMHQNKVQPDPST 651
+ +G+ +V+ Y T++ C +G I + + ++M ++ P+ S
Sbjct: 457 CSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESV 505
Score = 73.2 bits (178), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 150/375 (40%), Gaps = 40/375 (10%)
Query: 334 FIRAIVSDRG-LRNGMEVLKIMQQNNL-------KPQDSTI---ATLSVECSKALELDLA 382
+IRA S R LRNG+ L+ +L +P S I LSV +K D+
Sbjct: 44 WIRAFSSYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSV-IAKMNRYDVV 102
Query: 383 EALLDQISRCTNPKPFSAFLAACDTM-------DKPERAIKIFAKM-RQKLRPDIRTYEL 434
+L +Q+ P L C+ + +P RA KM + PD+ T+
Sbjct: 103 ISLFEQMQILGIP----PLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTS 158
Query: 435 LFSLFGNVNAPYEEGNMFSQVDSAKRINAIEMDMARNNIQHSHISMKNLLKALGAEGMIR 494
L + + + N + +F Q+ + M N + ++ L++ L +
Sbjct: 159 LLNGYCHWNRIEDAIALFDQI--------LGMGFKPNVVTYT-----TLIRCLCKNRHLN 205
Query: 495 ELIQYFCDSKTPLGTP---TYNTVLHSLVEAQESHRAMEIFKQMKTCGIPPNAATYNIMI 551
++ F T P TYN ++ L E A + + M I PN T+ +I
Sbjct: 206 HAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALI 265
Query: 552 DCCSIIRCFKSASALVSMMVRDGFYPQTMTYTALIKILLDYGDFDEALNLLDLVSLEGIP 611
D + A L ++M++ YP TY +LI L YG DEA + L+ G
Sbjct: 266 DAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCY 325
Query: 612 HDVLLYNTILKKACEKGRIDVIEFIIEQMHQNKVQPDPSTCHFVFSGYVNCGFHNSAMEA 671
+ ++Y T++ C+ R++ I +M Q V + T + GY G + A E
Sbjct: 326 PNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEV 385
Query: 672 LQVLSMRMLCEEVST 686
+S R ++ T
Sbjct: 386 FNQMSSRRAPPDIRT 400
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/262 (19%), Positives = 110/262 (41%), Gaps = 11/262 (4%)
Query: 398 FSAFLAACDTMDKPERAIKIFAK-MRQKLRPDIRTYELLFSLFGNVNAPYEEGNMFSQVD 456
F++ L ++ E AI +F + + +P++ TY L +F+Q+
Sbjct: 156 FTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMG 215
Query: 457 SAKRINAIEMDMARNNIQHSHISMKNLLKALGAEGMIRELIQYFCDSKTPLGTPTYNTVL 516
+ + +R N+ ++ ++ L +G G L++ + T+ ++
Sbjct: 216 T---------NGSRPNVV-TYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALI 265
Query: 517 HSLVEAQESHRAMEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASALVSMMVRDGFY 576
+ V+ + A E++ M + P+ TY +I+ + A + +M R+G Y
Sbjct: 266 DAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCY 325
Query: 577 PQTMTYTALIKILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILKKACEKGRIDVIEFI 636
P + YT LI ++ + + +S +G+ + + Y +++ C GR DV + +
Sbjct: 326 PNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEV 385
Query: 637 IEQMHQNKVQPDPSTCHFVFSG 658
QM + PD T + + G
Sbjct: 386 FNQMSSRRAPPDIRTYNVLLDG 407
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 106/260 (40%), Gaps = 20/260 (7%)
Query: 295 SFSDVIHACGRTQNSGLAEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRGLRNGMEVLKIM 354
+F+ +I A + A++L M + + P TY I + L ++ +M
Sbjct: 260 TFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLM 319
Query: 355 QQNNLKPQDSTIATLSVECSKALELDLAEALLDQISR---CTNPKPFSAFLAACDTMDKP 411
++N P + TL K+ ++ + ++S+ N ++ + + +P
Sbjct: 320 ERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRP 379
Query: 412 ERAIKIFAKMR-QKLRPDIRTYELLFSLFGNVNAPYEEGNMFSQVDSAKRINAIEMDMAR 470
+ A ++F +M ++ PDIRTY +L N E+ M + + EMD+
Sbjct: 380 DVAQEVFNQMSSRRAPPDIRTYNVLLDGLC-CNGKVEKALMIFEYMRKR-----EMDI-- 431
Query: 471 NNIQHSHISMKNLLKALGAEGMIRELIQYFCDSKTPLGTP---TYNTVLHSLVEAQESHR 527
NI I ++ + K G + + FC + P TY T++ H
Sbjct: 432 -NIVTYTIIIQGMCKL----GKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHE 486
Query: 528 AMEIFKQMKTCGIPPNAATY 547
A +FK+MK G PN + Y
Sbjct: 487 ADSLFKKMKEDGFLPNESVY 506
Score = 37.4 bits (85), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 65/163 (39%), Gaps = 2/163 (1%)
Query: 40 LTTTMGLNEESISKATQMQIVDALCR-GERSRASHLLLNLGHAHHSLGADDFFHILNYCA 98
L MG N + T +V LC G A+ LL ++ F +++
Sbjct: 210 LFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFV 269
Query: 99 RSPDPLFVMETWRMMEEKEIGLNNKCYLLMMQALCKGGYLEEASNLIYFLGERYGIYPIL 158
+ + E + +M + + + Y ++ LC G L+EA + Y + ER G YP
Sbjct: 270 KVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLM-ERNGCYPNE 328
Query: 159 PVYNSFLGACAKLHSMVHANLCLDLMDSRMVGKNEVTYTELLK 201
+Y + + K + M + V N +TYT L++
Sbjct: 329 VIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQ 371
>sp|Q9C6S6|PPR67_ARATH Putative pentatricopeptide repeat-containing protein At1g31840
OS=Arabidopsis thaliana GN=At1g31840 PE=2 SV=2
Length = 840
Score = 84.3 bits (207), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 128/600 (21%), Positives = 236/600 (39%), Gaps = 80/600 (13%)
Query: 69 SRASHLLLNLGHAHHSLGADDFFHILN-YCARSP-DPLFVMETWRMMEEKEIGLNNKCYL 126
SR L+L+ G A + + F ++N +C R D F + +++ME++ I + Y
Sbjct: 271 SRLLSLVLDCGPAPNVV---TFCTLINGFCKRGEMDRAF--DLFKVMEQRGIEPDLIAYS 325
Query: 127 LMMQALCKGGYLEEASNLIYFLGERYGIYPILPVYNSFLGACAKLHSMVHANLCLDLMDS 186
++ K G L L + G+ + V++S + K + A++ M
Sbjct: 326 TLIDGYFKAGMLGMGHKL-FSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLC 384
Query: 187 RMVGKNEVTYTELLKLAVWQKNLSAVHEIWEDYIKH-YSLSIFSLRKFVWSFTRLRDLKS 245
+ + N VTYT L+K + ++ +K SI + + F + +L+S
Sbjct: 385 QGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRS 444
Query: 246 AYETLQHMVALA------MMGKLYINRTSEG-RLRSSRLDIPIPLNALPVMKVLRWSFSD 298
+ + M+ + + G L + +G L + R + + ++ + V+ F+
Sbjct: 445 GFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVV---FNS 501
Query: 299 VIHACGRTQNSGLAEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRGLRNGMEVLKIMQQNN 358
+I R A ++ M G++P T+ +R + + L + + M +
Sbjct: 502 LIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMG 561
Query: 359 LKPQDSTIATLSVECSKALELDLAEALLDQISRCTNPKPFSAFLAACDTM-------DKP 411
L+P TL K ++ + L D + R SA +A C+ + +
Sbjct: 562 LEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQR----NKISADIAVCNVVIHLLFKCHRI 617
Query: 412 ERAIKIFAKMRQ-KLRPDIRTYELLFSLFGNVNAPYEEGNMFSQVDSAKRINAIEMDMAR 470
E A K F + + K+ PDI TY + + ++ ++D A+RI
Sbjct: 618 EDASKFFNNLIEGKMEPDIVTYNTMICGYCSLR----------RLDEAERIF-------- 659
Query: 471 NNIQHSHISMKNLLKALGAEGMIRELIQYFCDSKTPLG--TPTYNTVLHSLVEAQESHRA 528
LLK TP G T T ++H L + + A
Sbjct: 660 -----------ELLKV------------------TPFGPNTVTLTILIHVLCKNNDMDGA 690
Query: 529 MEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASALVSMMVRDGFYPQTMTYTALIKI 588
+ +F M G PNA TY ++D S + + L M G P ++Y+ +I
Sbjct: 691 IRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDG 750
Query: 589 LLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILKKACEKGRIDVIEFIIEQMHQNKVQPD 648
L G DEA N+ + DV+ Y +++ C+ GR+ + E M +N V+PD
Sbjct: 751 LCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 810
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/378 (18%), Positives = 137/378 (36%), Gaps = 29/378 (7%)
Query: 311 LAEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRGLRNGMEVLKIMQQNNLKPQDSTIATLS 370
+A +L+ + G P+ T+ I + ++ K+M+Q ++P +TL
Sbjct: 269 VASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLI 328
Query: 371 VECSKALELDLAEALLDQISRCTNPKPFSAFLAACDTMDKP---ERAIKIFAKMR-QKLR 426
KA L + L Q F + D K A ++ +M Q +
Sbjct: 329 DGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGIS 388
Query: 427 PDIRTYELLFSLFGNVNAPYEEGNMFSQV----------------------DSAKRINAI 464
P++ TY +L YE M+ Q+ + + A+
Sbjct: 389 PNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFAL 448
Query: 465 EMDMARNNIQHSHISMKNLLKALGAEGMIRELIQY---FCDSKTPLGTPTYNTVLHSLVE 521
DM + + L+ L +G++ +++ L +N+++
Sbjct: 449 YEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCR 508
Query: 522 AQESHRAMEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASALVSMMVRDGFYPQTMT 581
A+++F+ M GI P+ AT+ ++ + + A L M + G P +
Sbjct: 509 LNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALA 568
Query: 582 YTALIKILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILKKACEKGRIDVIEFIIEQMH 641
Y LI + L L DL+ I D+ + N ++ + RI+ +
Sbjct: 569 YCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLI 628
Query: 642 QNKVQPDPSTCHFVFSGY 659
+ K++PD T + + GY
Sbjct: 629 EGKMEPDIVTYNTMICGY 646
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 96/235 (40%), Gaps = 6/235 (2%)
Query: 452 FSQVDSAKRINAIEMDMARNNIQHSHISMKNLLKALGAEGMIRELIQYFCDSKT-PLGTP 510
+ VD A I + Q S M N L +I + C P G
Sbjct: 159 YGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSGVS 218
Query: 511 TYNTVLHSLVEAQESHRAMEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASALVSMM 570
+ VL +L E +A++ + + G + N ++ S+ + + AS L+S++
Sbjct: 219 AHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQ-IEVASRLLSLV 277
Query: 571 VRDGFYPQTMTYTALIKILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILKKACEKGRI 630
+ G P +T+ LI G+ D A +L ++ GI D++ Y+T++ + G +
Sbjct: 278 LDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGML 337
Query: 631 DVIEFIIEQMHQNKVQPDPSTCHFVFSGYVNCGFHNSAMEALQVLSMRMLCEEVS 685
+ + Q V+ D VFS ++ + + V+ RMLC+ +S
Sbjct: 338 GMGHKLFSQALHKGVKLDV----VVFSSTIDVYVKSGDLATASVVYKRMLCQGIS 388
>sp|Q9C9U0|PP118_ARATH Pentatricopeptide repeat-containing protein At1g73710
OS=Arabidopsis thaliana GN=At1g73710 PE=2 SV=1
Length = 991
Score = 84.0 bits (206), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 116/257 (45%), Gaps = 15/257 (5%)
Query: 421 MRQKLR-PDIRTYELLFSLFGNVNAPYEEGNMFSQVDSAKRIN----AIEMDMARNNIQH 475
M Q++ PD T + +F N + ++ + F + A +++ +I+ D +N
Sbjct: 206 MGQRMHFPDEVTMATVVRVFKN-SGEFDRADRFFKGWCAGKVDLDLDSID-DFPKNGSAQ 263
Query: 476 SHISMKNLLK----ALGAEGMIRELIQYFCDS----KTPLGTPTYNTVLHSLVEAQESHR 527
S +++K L +GA I + + + S + P T T+NT++ +A +
Sbjct: 264 SPVNLKQFLSMELFKVGARNPIEKSLHFASGSDSSPRKPRLTSTFNTLIDLYGKAGRLND 323
Query: 528 AMEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASALVSMMVRDGFYPQTMTYTALIK 587
A +F +M G+P + T+N MI C A +L+ M G P T TY L+
Sbjct: 324 AANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNILLS 383
Query: 588 ILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILKKACEKGRIDVIEFIIEQMHQNKVQP 647
+ D GD + AL + G+ D + + +L C++ + +E +I +M +N ++
Sbjct: 384 LHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRI 443
Query: 648 DPSTCHFVFSGYVNCGF 664
D + + YVN G
Sbjct: 444 DEHSVPVIMQMYVNEGL 460
Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 93/461 (20%), Positives = 187/461 (40%), Gaps = 47/461 (10%)
Query: 295 SFSDVIHACGRTQNSGLAEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRG-LRNGMEVLKI 353
+F+ +IH CG + AE L+ +M+ G+ P + TY+ + ++ +D G + +E +
Sbjct: 342 TFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYN-ILLSLHADAGDIEAALEYYRK 400
Query: 354 MQQNNLKPQDST-IATLSVECSKALELDLAEALLDQISRCTNPKPFSAFLAACDTMDKPE 412
+++ L P T A L + C + + ++ EA++ ++ R +++ E
Sbjct: 401 IRKVGLFPDTVTHRAVLHILCQRKMVAEV-EAVIAEMDR--------------NSIRIDE 445
Query: 413 RAIKIFAKMRQKLRPDIRTYELL--FSL--------FGNVNAPYEEGNMFSQVDS---AK 459
++ + +M ++ L F L V Y E ++ + ++ K
Sbjct: 446 HSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGK 505
Query: 460 RINAIEMDMARNNIQHSHISMKNLLKALGAEGMIRELIQYFCDSKTPLGTP---TYNTVL 516
R M RN++ ++ ++KA G + + + F K P TYN++
Sbjct: 506 R----NMSGQRNDVLEYNV----MIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLF 557
Query: 517 HSLVEAQESHRAMEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASALVSMMVRDGFY 576
L A I +M G P TY MI + A L M + G
Sbjct: 558 QMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVK 617
Query: 577 PQTMTYTALIKILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILKKACEKGRIDVIEFI 636
P + Y +LI + G +EA+ ++ G+ + ++ +++K + G ++ +
Sbjct: 618 PNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRV 677
Query: 637 IEQMHQNKVQPDPSTCHFVFSGYVNCGFHNSAMEALQVLSMRMLCEEVS-----TLEEKR 691
++M ++ PD + + + S + G + A L + C+ +S L +
Sbjct: 678 YDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKGTCDVISFATMMYLYKGM 737
Query: 692 SDFEDLILAEDSEAESRILQFCEDSNENLAFTAALLQLRWC 732
++ I + ES +L C N+ +A AA QL C
Sbjct: 738 GMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSEC 778
Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 95/463 (20%), Positives = 175/463 (37%), Gaps = 93/463 (20%)
Query: 360 KPQ-DSTIATLSVECSKALELDLAEALLDQISRCTNP---KPFSAFLAACDTMDKPERAI 415
KP+ ST TL KA L+ A L ++ + P F+ + C T A
Sbjct: 301 KPRLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAE 360
Query: 416 KIFAKMRQK-LRPDIRTYELLFSLF---GNVNAPYEEG-------------------NMF 452
+ KM +K + PD +TY +L SL G++ A E ++
Sbjct: 361 SLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHIL 420
Query: 453 SQVDSAKRINAIEMDMARNNIQHSHISMKNLLKALGAEGMI---RELIQYF----CDSKT 505
Q + A+ +M RN+I+ S+ +++ EG++ + L + F S T
Sbjct: 421 CQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSST 480
Query: 506 PLGTPT-------------------------------YNTVLHSLVEAQESHRAMEIFKQ 534
L YN ++ + +A+ +A+ +FK
Sbjct: 481 TLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKG 540
Query: 535 MKTCGIPPNAATYNIMIDCCSIIRCFKSASALVSMMVRDGFYPQTMTYTALIKILLDYGD 594
MK G P+ TYN + + + A +++ M+ G P TY A+I + G
Sbjct: 541 MKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGL 600
Query: 595 FDEALNLLDLVSLEGIPHDVLLYNTILKKACEKGRIDVIEFIIEQMHQNKVQPDPSTCHF 654
+A++L + + G+ + ++Y +++ E G ++ M ++ VQ + H
Sbjct: 601 LSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSN----HI 656
Query: 655 VFSGYVNCGFHNSAMEALQVLSMRMLCEEVSTLEEKRSDFEDLILAE---DSEAESRILQ 711
V + + +V LEE R ++ + +E D A + +L
Sbjct: 657 VLTSLIKA------------------YSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLS 698
Query: 712 FCED---SNENLAFTAALLQLRWCTIVGFPISWSLDRASGLED 751
C D +E + AL + C ++ F L + G+ D
Sbjct: 699 LCADLGIVSEAESIFNALREKGTCDVISFATMMYLYKGMGMLD 741
Score = 37.7 bits (86), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 47/112 (41%), Gaps = 10/112 (8%)
Query: 512 YNTVLHSLVEAQESHRAMEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASALVSMMV 571
YN VL +L A + + +M G+ P TY +++D K A + M
Sbjct: 148 YNIVLRALGRAGKWDELRLCWIEMAHNGVLPTNNTYGMLVDVYGKAGLVKEALLWIKHMG 207
Query: 572 RDGFYPQTMTYTALIKILLDYGDFDEALNL----------LDLVSLEGIPHD 613
+ +P +T ++++ + G+FD A LDL S++ P +
Sbjct: 208 QRMHFPDEVTMATVVRVFKNSGEFDRADRFFKGWCAGKVDLDLDSIDDFPKN 259
Score = 33.1 bits (74), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 62/358 (17%), Positives = 138/358 (38%), Gaps = 20/358 (5%)
Query: 312 AEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRGLRNGMEVLKIMQQNNLKPQDSTIATLS- 370
A++++ +M G +P TY I + V L + +++ + M++ +KP + +L
Sbjct: 569 AQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLIN 628
Query: 371 --VECSKALELDLAEALLDQISRCTNPKPFSAFLAACDTMDKPERAIKIFAKMR-QKLRP 427
E E ++++ +N ++ + A + E A +++ KM+ + P
Sbjct: 629 GFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGP 688
Query: 428 DIRTYELLFSLFGNVNAPYEEGNMFSQVDSAKRINAIEMDMARNNIQHSHISMKNLLKAL 487
D+ + SL ++ E ++F+ + + I S +M L K +
Sbjct: 689 DVAASNSMLSLCADLGIVSEAESIFNALREKGTCDVI-----------SFATMMYLYKGM 737
Query: 488 GAEGMIRELIQYFCDSKTPLGTPTYNTVLHSLVEAQESHRAMEIFKQMKT-CGIPPNAAT 546
G E+ + +S ++N V+ + E+F +M + + T
Sbjct: 738 GMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEMLVERKLLLDWGT 797
Query: 547 YNIMIDCCSIIRCFKSASALVSMMVRDGFYPQTMTYTALIKILLD-YGDFDEALNLLDLV 605
+ + ++++ S VS + + + A+ L G + AL +
Sbjct: 798 FKTLF---TLLKKGGVPSEAVSQLQTAYNEAKPLATPAITATLFSAMGLYAYALESCQEL 854
Query: 606 SLEGIPHDVLLYNTILKKACEKGRIDVIEFIIEQMHQNKVQPDPSTCHFVFSGYVNCG 663
+ IP + YN ++ G ID+ +M + ++PD T ++ Y G
Sbjct: 855 TSGEIPREHFAYNAVIYTYSASGDIDMALKAYMRMQEKGLEPDIVTQAYLVGIYGKAG 912
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 84.0 bits (206), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/381 (20%), Positives = 165/381 (43%), Gaps = 14/381 (3%)
Query: 294 WSFSDVIHACGRTQNSGLAEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRGLRNGMEVLKI 353
++ S +I+ R + A M ++ LG +P + ++ + + + + +E++
Sbjct: 124 YTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDR 183
Query: 354 MQQNNLKPQDSTIATLSVECSKALELDLAEALLDQISRCT---NPKPFSAFLAACDTMDK 410
M + KP T+ TL ++ A L+D++ N + L +
Sbjct: 184 MVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQ 243
Query: 411 PERAIKIFAKMRQK-LRPDIRTYELLFSLFGNVNAPYEEGNMFSQVDSAKRINAIEMDMA 469
A+++ KM ++ ++ D Y ++ + N+F++++ I + D+
Sbjct: 244 TALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEME----IKGFKADII 299
Query: 470 RNNIQHSHISMKNLLKALGAEGMIRELIQYFCDSKTPLGTPTYNTVLHSLVEAQESHRAM 529
N N + ++R++I+ K T++ ++ S V+ + A
Sbjct: 300 TYNTLIGGFC--NAGRWDDGAKLLRDMIK----RKISPNVVTFSVLIDSFVKEGKLREAD 353
Query: 530 EIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASALVSMMVRDGFYPQTMTYTALIKIL 589
++ K+M GI PN TYN +ID + A +V +M+ G P MT+ LI
Sbjct: 354 QLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGY 413
Query: 590 LDYGDFDEALNLLDLVSLEGIPHDVLLYNTILKKACEKGRIDVIEFIIEQMHQNKVQPDP 649
D+ L L +SL G+ + + YNT+++ C+ G+++V + + ++M +V+PD
Sbjct: 414 CKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDI 473
Query: 650 STCHFVFSGYVNCGFHNSAME 670
+ + G + G A+E
Sbjct: 474 VSYKILLDGLCDNGELEKALE 494
Score = 67.4 bits (163), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 105/553 (18%), Positives = 212/553 (38%), Gaps = 90/553 (16%)
Query: 196 YTELLKLAVWQKNLSAVHEIWEDYIKHYSLSIFSLRKFVWSFTRLRDLKSAYETLQHMVA 255
++ + K ++ L+ ++ I H SI++L + F R R L A+ T+ ++
Sbjct: 95 FSAIAKTKQYELVLALCKQMESKGIAH---SIYTLSIMINCFCRCRKLSYAFSTMGKIMK 151
Query: 256 LAMMGKLYI-NRTSEGRLRSSRL-------DIPIPLNALPVMKVLRWSFSDVIHACGRTQ 307
L I N G R+ D + + P + L + G
Sbjct: 152 LGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVN------GLCL 205
Query: 308 NSGLAEQLML--QMQSLGLQPSSHTYDGFIRAIVSDRGLRNGMEVLKIMQQNNLKPQDST 365
N +++ ++L +M G QP+ TY + + ME+L+ M++ N+K
Sbjct: 206 NGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265
Query: 366 IATLSVECSKALELDLAEALLDQISRCTNPKPFSAFLAACDTM-------DKPERAIKIF 418
+ + K LD A L +++ K F A + +T+ + + K+
Sbjct: 266 YSIIIDGLCKDGSLDNAFNLFNEME----IKGFKADIITYNTLIGGFCNAGRWDDGAKLL 321
Query: 419 AKM-RQKLRPDIRTYELLFSLFGNVNAPYEEGNMFSQVDSAKRINAIEMDMARNNIQHSH 477
M ++K+ P++ T+ +L F +EG + + + + +M + I +
Sbjct: 322 RDMIKRKISPNVVTFSVLIDSF------VKEGKL-------READQLLKEMMQRGIAPNT 368
Query: 478 ISMKNLLKALGAEGMIRELIQYF-------CDSKTPLGTPTYNTVLHSLVEAQESHRAME 530
I+ +L+ E + E IQ CD T+N +++ +A +E
Sbjct: 369 ITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIM----TFNILINGYCKANRIDDGLE 424
Query: 531 IFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASALVSMMVRDGFYPQTMTYTALIKILL 590
+F++M G+ N TYN ++ + A L MV P ++Y L+ L
Sbjct: 425 LFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLC 484
Query: 591 DYGDFDEALNL----------LDL-------------------------VSLEGIPHDVL 615
D G+ ++AL + LD+ + L+G+ D
Sbjct: 485 DNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDAR 544
Query: 616 LYNTILKKACEKGRIDVIEFIIEQMHQNKVQPDPSTCHFVFSGYVNCGFHNSAMEALQVL 675
YN ++ + C K + + + +M + PD T + + ++ +A E ++ +
Sbjct: 545 AYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEM 604
Query: 676 SMRMLCEEVSTLE 688
+VST++
Sbjct: 605 KSSGFPADVSTVK 617
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 119/592 (20%), Positives = 210/592 (35%), Gaps = 74/592 (12%)
Query: 37 SRTLTTTMGLNE--ESISKATQMQIVDALCRGERSRASHLLLNLGHAHHSLGADDFFHIL 94
SR L T + N +I+K Q ++V ALC+ S+ + H+ ++L ++
Sbjct: 82 SRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKG------IAHSIYTLSI-----MI 130
Query: 95 NYCARSPDPLFVMETWRMMEEKEIGLNNKCYLLMMQALCKGGYLEEASNLIYFLGERYGI 154
N R + T + + + + ++ LC + EA L+ + E G
Sbjct: 131 NCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVE-MGH 189
Query: 155 YPILPVYNSFLGACAKLHSMVHANLCLDLMDSRMVGKNEVTYTELLKLAVWQKNLSAVHE 214
P L N+ + + A + +D M NEVTY +L + + E
Sbjct: 190 KPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAME 249
Query: 215 IWEDYI-KHYSLSIFSLRKFVWSFTRLRDLKSAYETLQHMVALAMMGKLYI-NRTSEGRL 272
+ ++ L + + L +A+ M + N G
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFC 309
Query: 273 RSSRLDIPIPLNALPVMKVLR---WSFSDVIHACGRTQNSGLAEQLMLQMQSLGLQPSSH 329
+ R D L + + + +FS +I + + A+QL+ +M G+ P++
Sbjct: 310 NAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTI 369
Query: 330 TYDGFIRAIVSDRGLRNGMEVLKIMQQNNLKPQDSTIATLSVECSKALELDLAEALLDQI 389
TY+ I + L ++++ +M P T L KA +D L ++
Sbjct: 370 TYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREM 429
Query: 390 S---RCTNPKPFSAFLAACDTMDKPERAIKIFAKM-RQKLRPDIRTYELLFSLFGNVNAP 445
S N ++ + K E A K+F +M +++RPDI
Sbjct: 430 SLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDI---------------- 473
Query: 446 YEEGNMFSQVDSAKRINAIEMDMARNNIQHSHISMKNLLKALGAEGMIRELIQYFCD--- 502
+S K LL L G + + ++ F
Sbjct: 474 --------------------------------VSYKILLDGLCDNGELEKALEIFGKIEK 501
Query: 503 SKTPLGTPTYNTVLHSLVEAQESHRAMEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKS 562
SK L Y ++H + A + A ++F + G+ +A YNIMI
Sbjct: 502 SKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSK 561
Query: 563 ASALVSMMVRDGFYPQTMTYTALIKILLDYGDFDEALNLLDLVSLEGIPHDV 614
A L M +G P +TY LI+ L D A L++ + G P DV
Sbjct: 562 ADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADV 613
Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 95/198 (47%), Gaps = 10/198 (5%)
Query: 484 LKALGAEGMIRELIQYFCDSKTPLGTPT-YNTVLHSLVEAQESHRAMEIFKQMKTCGIPP 542
+KA A + R++IQ PL T +N + ++ + ++ + + KQM++ GI
Sbjct: 67 IKADDAVDLFRDMIQ-----SRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAH 121
Query: 543 NAATYNIMIDCCSIIRCFKSASALVSM--MVRDGFYPQTMTYTALIKILLDYGDFDEALN 600
+ T +IMI+C RC K + A +M +++ G+ P T+ + L+ L EAL
Sbjct: 122 SIYTLSIMINC--FCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALE 179
Query: 601 LLDLVSLEGIPHDVLLYNTILKKACEKGRIDVIEFIIEQMHQNKVQPDPSTCHFVFSGYV 660
L+D + G ++ NT++ C G++ +I++M + QP+ T V +
Sbjct: 180 LVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMC 239
Query: 661 NCGFHNSAMEALQVLSMR 678
G AME L+ + R
Sbjct: 240 KSGQTALAMELLRKMEER 257
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 83.6 bits (205), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 81/391 (20%), Positives = 165/391 (42%), Gaps = 28/391 (7%)
Query: 294 WSFSDVIHACGRTQNSGLAEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRGLRNGMEVLKI 353
++ S +I+ C R + LA M ++ LG +P + T+ I + + + +E++
Sbjct: 108 YTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDR 167
Query: 354 MQQNNLKPQDSTIATLSVECSKALELDLAEALLDQISRCT---NPKPFSAFLAACDTMDK 410
M + KP T+ L ++ A L+D++ N + L +
Sbjct: 168 MVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQ 227
Query: 411 PERAIKIFAKMRQ-KLRPDIRTYELLFSLFGNVNAPYEEGNMFSQVDSAKRINAIEMDMA 469
A+++ KM + K++ D Y ++ + N+F++++ I + D+
Sbjct: 228 TALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEME----IKGFKADI- 282
Query: 470 RNNIQHSHISMKNLLKALGAEG-------MIRELIQYFCDSKTPLGTPTYNTVLHSLVEA 522
I L++ G ++R++I+ K ++ ++ V+
Sbjct: 283 --------IIYTTLIRGFCYAGRWDDGAKLLRDMIK----RKITPDVVAFSALIDCFVKE 330
Query: 523 QESHRAMEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASALVSMMVRDGFYPQTMTY 582
+ A E+ K+M GI P+ TY +ID A+ ++ +MV G P T+
Sbjct: 331 GKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTF 390
Query: 583 TALIKILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILKKACEKGRIDVIEFIIEQMHQ 642
LI D+ L L +SL G+ D + YNT+++ CE G+++V + + ++M
Sbjct: 391 NILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVS 450
Query: 643 NKVQPDPSTCHFVFSGYVNCGFHNSAMEALQ 673
+V+PD + + G + G A+E +
Sbjct: 451 RRVRPDIVSYKILLDGLCDNGEPEKALEIFE 481
Score = 73.2 bits (178), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 113/498 (22%), Positives = 184/498 (36%), Gaps = 61/498 (12%)
Query: 128 MMQALCKGGYLEEASNLIYFLGERYGIYPILPVYNSFLGACAKLHSMVHANLCLDLMDSR 187
++ LC G + EA L+ + E G P L N+ + + A L +D M
Sbjct: 148 LINGLCLEGRVSEALELVDRMVE-MGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVET 206
Query: 188 MVGKNEVTYTELLKLAVWQKNLSAVHEIWEDYIKHYSLSIFSLRKFVWSFTRLRDLKSAY 247
NEVTY +LK+ + E+ LRK +L +K Y
Sbjct: 207 GFQPNEVTYGPVLKVMCKSGQTALAMEL--------------LRKMEERKIKLDAVK--Y 250
Query: 248 ETLQHMVALAMMGKL--YINRTSEGRLRSSRLDIPIPLNALPVMKVLRWSFSDVIHA--- 302
+ + L G L N +E ++ + DI I ++ +I
Sbjct: 251 SII--IDGLCKDGSLDNAFNLFNEMEIKGFKADIII--------------YTTLIRGFCY 294
Query: 303 CGRTQNSGLAEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRGLRNGMEVLKIMQQNNLKPQ 362
GR + +L+ M + P + I V + LR E+ K M Q + P
Sbjct: 295 AGRWDDGA---KLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPD 351
Query: 363 DSTIATLSVECSKALELDLAEALLD-QISRCTNP--KPFSAFLAACDTMDKPERAIKIFA 419
T +L K +LD A +LD +S+ P + F+ + + + +++F
Sbjct: 352 TVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFR 411
Query: 420 KMR-QKLRPDIRTYELLFSLFGNVNAPYEEGNMFSQVDSAKRINAIEMDMARNNIQHSHI 478
KM + + D TY L F + +F + M ++ +
Sbjct: 412 KMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQE-------------MVSRRVRPDIV 458
Query: 479 SMKNLLKALGAEGMIRELIQYFCD---SKTPLGTPTYNTVLHSLVEAQESHRAMEIFKQM 535
S K LL L G + ++ F SK L YN ++H + A + A ++F +
Sbjct: 459 SYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSL 518
Query: 536 KTCGIPPNAATYNIMIDCCSIIRCFKSASALVSMMVRDGFYPQTMTYTALIKILLDYGDF 595
G+ P+ TYNIMI A L M DG P TY LI+ L GD
Sbjct: 519 PLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDA 578
Query: 596 DEALNLLDLVSLEGIPHD 613
++ L++ + G D
Sbjct: 579 TKSAKLIEEIKRCGFSVD 596
Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/378 (21%), Positives = 158/378 (41%), Gaps = 24/378 (6%)
Query: 295 SFSDVIHACGRTQNSGLAEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRGLRNGMEVLKIM 354
++ V+ ++ + LA +L+ +M+ ++ + Y I + D L N + M
Sbjct: 214 TYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM 273
Query: 355 QQNNLKPQDSTIATLSVE--CSKALELDLAEALLDQISRCTNPK--PFSAFLAACDTMDK 410
+ K D I T + C D A+ L D I R P FSA + K
Sbjct: 274 EIKGFKA-DIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGK 332
Query: 411 PERAIKIFAKMRQK-LRPDIRTYELLFSLFGNVNAPYEEGNMFSQVDSAKRINAIEMDMA 469
A ++ +M Q+ + PD TY L F N Q+D A + +++ ++
Sbjct: 333 LREAEELHKEMIQRGISPDTVTYTSLIDGFCKEN----------QLDKANHM--LDLMVS 380
Query: 470 RN---NIQHSHISMKNLLKA-LGAEGMIRELIQYFCDSKTPLGTPTYNTVLHSLVEAQES 525
+ NI+ +I + KA L +G+ EL + T TYNT++ E +
Sbjct: 381 KGCGPNIRTFNILINGYCKANLIDDGL--ELFRKMSLRGVVADTVTYNTLIQGFCELGKL 438
Query: 526 HRAMEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASALVSMMVRDGFYPQTMTYTAL 585
A E+F++M + + P+ +Y I++D + A + + + Y +
Sbjct: 439 EVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNII 498
Query: 586 IKILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILKKACEKGRIDVIEFIIEQMHQNKV 645
I + + D+A +L + L+G+ DV YN ++ C+KG + + + +M ++
Sbjct: 499 IHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGH 558
Query: 646 QPDPSTCHFVFSGYVNCG 663
P+ T + + ++ G
Sbjct: 559 SPNGCTYNILIRAHLGEG 576
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 82/169 (48%), Gaps = 4/169 (2%)
Query: 512 YNTVLHSLVEAQESHRAMEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASALVSM-- 569
++ + + ++ +++ KQM+ GI N T +IMI+CC RC K + A +M
Sbjct: 75 FSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCC--RCRKLSLAFSAMGK 132
Query: 570 MVRDGFYPQTMTYTALIKILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILKKACEKGR 629
+++ G+ P T+T++ LI L G EAL L+D + G ++ N ++ C G+
Sbjct: 133 IIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGK 192
Query: 630 IDVIEFIIEQMHQNKVQPDPSTCHFVFSGYVNCGFHNSAMEALQVLSMR 678
+ +I++M + QP+ T V G AME L+ + R
Sbjct: 193 VSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEER 241
Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/222 (18%), Positives = 92/222 (41%), Gaps = 3/222 (1%)
Query: 468 MARNNIQHSHISMKNLLKAL---GAEGMIRELIQYFCDSKTPLGTPTYNTVLHSLVEAQE 524
M Q + ++ +LK + G + EL++ + K L Y+ ++ L +
Sbjct: 203 MVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGS 262
Query: 525 SHRAMEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASALVSMMVRDGFYPQTMTYTA 584
A +F +M+ G + Y +I + + L+ M++ P + ++A
Sbjct: 263 LDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSA 322
Query: 585 LIKILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILKKACEKGRIDVIEFIIEQMHQNK 644
LI + G EA L + GI D + Y +++ C++ ++D +++ M
Sbjct: 323 LIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKG 382
Query: 645 VQPDPSTCHFVFSGYVNCGFHNSAMEALQVLSMRMLCEEVST 686
P+ T + + +GY + +E + +S+R + + T
Sbjct: 383 CGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVT 424
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 103/508 (20%), Positives = 203/508 (39%), Gaps = 79/508 (15%)
Query: 59 IVDALC-RGERSRASHLLLNLGHAHHSLGADDFFHILNYCARSPDPLFVMETWRMMEEKE 117
+V+ LC G+ S A L+ + + +L +S ME R MEE++
Sbjct: 183 LVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERK 242
Query: 118 IGLNNKCYLLMMQALCKGGYLEEASNLIYFLGERYGIYPILPVYNSFL-GACAKLHSMVH 176
I L+ Y +++ LCK G L+ A NL + E G + +Y + + G C
Sbjct: 243 IKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM-EIKGFKADIIIYTTLIRGFCYAGRWDDG 301
Query: 177 ANLCLDLMDSRMVGKNEVTYTELLKLAVWQKNLSAVHEIWEDYIKH-YSLSIFSLRKFVW 235
A L D++ R + + V ++ L+ V + L E+ ++ I+ S + +
Sbjct: 302 AKLLRDMI-KRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLID 360
Query: 236 SFTRLRDLKSAYETLQHMVALAMMGKLYINRTSEGRLRSSRLDIPIPLNALPVMKVLRWS 295
F + L A HM LD+ + P ++ +
Sbjct: 361 GFCKENQLDKA----NHM-----------------------LDLMVSKGCGPNIR----T 389
Query: 296 FSDVIHACGRTQNSGLAEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRGLRNGMEVLKIMQ 355
F+ +I+ + +L +M G+ + TY+ I+ L E+ + M
Sbjct: 390 FNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMV 449
Query: 356 QNNLKPQDSTIATLSVECSKALELDLAEALLDQISRCTNPKPFSAFLAACDTMDKPERAI 415
++P I + + LLD + CD +PE+A+
Sbjct: 450 SRRVRPD---IVSYKI-------------LLDGL---------------CDN-GEPEKAL 477
Query: 416 KIFAKM-RQKLRPDIRTYELLFSLFGNVNAPYEEGNMFSQVDSAKRINAIEMDMARNNIQ 474
+IF K+ + K+ DI Y ++ N + + ++F + + ++ D+ NI
Sbjct: 478 EIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLP----LKGVKPDVKTYNIM 533
Query: 475 HSHISMKNLLKALGAEGMIRELIQYFCDSKTPLGTPTYNTVLHSLVEAQESHRAMEIFKQ 534
+ K L A+ + R++ + D +P G TYN ++ + + ++ ++ ++ ++
Sbjct: 534 IGGLCKKGSLSE--ADLLFRKMEE---DGHSPNGC-TYNILIRAHLGEGDATKSAKLIEE 587
Query: 535 MKTCGIPPNAATYNIMIDCCSIIRCFKS 562
+K CG +A+T +++D S R KS
Sbjct: 588 IKRCGFSVDASTVKMVVDMLSDGRLKKS 615
>sp|Q9SUD8|PP340_ARATH Pentatricopeptide repeat-containing protein At4g28010
OS=Arabidopsis thaliana GN=At4g28010 PE=2 SV=1
Length = 704
Score = 82.8 bits (203), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 90/369 (24%), Positives = 166/369 (44%), Gaps = 34/369 (9%)
Query: 298 DVIHACGRTQNSGLAEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRGLRNGMEVLKIMQQN 357
D + G+T+ A QL+ M +P++ TY+ I + D + + +E++++M++
Sbjct: 325 DGLCGVGKTKE---ALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKR 381
Query: 358 NLKPQDSTIATL-SVECSKALELDLAEALLDQI---SRCTNPK--PFSAFLAACDTMDKP 411
+P + T L C+K +LD A LL + S T+P ++A + ++
Sbjct: 382 RTRPDNITYNILLGGLCAKG-DLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRL 440
Query: 412 ERAIKIFAKMRQKLRPDIR--TYELLFSLF--GNVNAPYEEGNMFSQVDSAKRINAIEMD 467
+A+ I+ + +KL R T LL S G+VN E ++ Q+ +K
Sbjct: 441 HQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAME---LWKQISDSK-------- 489
Query: 468 MARNNIQHSHISMKNLLKALGAEGMIRELIQYFCDSKTPLGTPT---YNTVLHSLVEAQE 524
+ RN+ ++ ++ GM+ C + P+ YN +L SL +
Sbjct: 490 IVRNSDTYTA-----MIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGS 544
Query: 525 SHRAMEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASALVSMMVRDGFYPQTMTYTA 584
+A +F++M+ P+ ++NIMID KSA +L+ M R G P TY+
Sbjct: 545 LDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSK 604
Query: 585 LIKILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILKKACEKGRIDVIEFIIEQMHQNK 644
LI L G DEA++ D + G D + +++LK +G D + +++++
Sbjct: 605 LINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKD 664
Query: 645 VQPDPS-TC 652
+ D TC
Sbjct: 665 IVLDKELTC 673
Score = 74.3 bits (181), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 117/270 (43%), Gaps = 23/270 (8%)
Query: 413 RAIKIFAKMRQK-LRPDIRTYELLFSLFGNVNAPYEEGNMFSQVDSAKRINAIEM--DMA 469
+A+ + +MR+ L PD+ +Y + F EG + A+E+ +M
Sbjct: 160 KAVSLLREMRRNSLMPDVFSYNTVIRGFC-------EGKELEK--------ALELANEMK 204
Query: 470 RNNIQHSHISMKNLLKALGAEGMIRELIQYFCDSK---TPLGTPTYNTVLHSLVEAQESH 526
+ S ++ L+ A G + E + + + K Y +++ + E
Sbjct: 205 GSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELD 264
Query: 527 RAMEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASALVSMMVRDGFYPQTMTYTALI 586
R +F ++ G P A TYN +I + K AS + M+ G P TYT LI
Sbjct: 265 RGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLI 324
Query: 587 KILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILKKACEKGRI-DVIEFIIEQMHQNKV 645
L G EAL LL+L+ + + + YN I+ K C+ G + D +E I+E M + +
Sbjct: 325 DGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVE-IVELMKKRRT 383
Query: 646 QPDPSTCHFVFSGYVNCGFHNSAMEALQVL 675
+PD T + + G G + A + L ++
Sbjct: 384 RPDNITYNILLGGLCAKGDLDEASKLLYLM 413
Score = 70.1 bits (170), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 75/365 (20%), Positives = 143/365 (39%), Gaps = 53/365 (14%)
Query: 312 AEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRGLRNGMEVLKIMQQNNLKPQDSTI-ATLS 370
A ++ M G++P+ +TY G I + + +++L +M + + +P T ++
Sbjct: 301 ASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIIN 360
Query: 371 VECSKALELDLAEALLDQISRCTNPKPFS-----AFLAACDTMDKPERAIKIFAKMRQKL 425
C L D E + R T P + L A +D+ + + + K
Sbjct: 361 KLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYT 420
Query: 426 RPDIRTYELLFSLFGNVNAPYEEGNMFSQVDSAKRINAIEMDMARNNIQHSHISMKNLL- 484
PD+ +Y NA+ + + N H + + +LL
Sbjct: 421 DPDVISY-----------------------------NALIHGLCKENRLHQALDIYDLLV 451
Query: 485 KALGAEGMIRELIQYFCDSKTPLGTPTYNTVLHSLVEAQESHRAMEIFKQMKTCGIPPNA 544
+ LGA + T N +L+S ++A + ++AME++KQ+ I N+
Sbjct: 452 EKLGAGDRV-----------------TTNILLNSTLKAGDVNKAMELWKQISDSKIVRNS 494
Query: 545 ATYNIMIDCCSIIRCFKSASALVSMMVRDGFYPQTMTYTALIKILLDYGDFDEALNLLDL 604
TY MID A L+ M P Y L+ L G D+A L +
Sbjct: 495 DTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEE 554
Query: 605 VSLEGIPHDVLLYNTILKKACEKGRIDVIEFIIEQMHQNKVQPDPSTCHFVFSGYVNCGF 664
+ + DV+ +N ++ + + G I E ++ M + + PD T + + ++ G+
Sbjct: 555 MQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGY 614
Query: 665 HNSAM 669
+ A+
Sbjct: 615 LDEAI 619
Score = 63.2 bits (152), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 67/144 (46%)
Query: 511 TYNTVLHSLVEAQESHRAMEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASALVSMM 570
TYNT++ + + A EIF+ M G+ PN TY +ID + K A L+++M
Sbjct: 284 TYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLM 343
Query: 571 VRDGFYPQTMTYTALIKILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILKKACEKGRI 630
+ P +TY +I L G +A+ +++L+ D + YN +L C KG +
Sbjct: 344 IEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDL 403
Query: 631 DVIEFIIEQMHQNKVQPDPSTCHF 654
D ++ M ++ DP +
Sbjct: 404 DEASKLLYLMLKDSSYTDPDVISY 427
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 79/395 (20%), Positives = 164/395 (41%), Gaps = 30/395 (7%)
Query: 295 SFSDVIHACGRTQNSGLAEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRGLRNGMEVLKIM 354
S S ++ + + +G A ++ M G + + ++ ++ + + + +L+ M
Sbjct: 109 SLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREM 168
Query: 355 QQNNLKPQDSTIATLSVECSKALELDLAEALLDQI--SRCT-NPKPFSAFLAACDTMDKP 411
++N+L P + T+ + EL+ A L +++ S C+ + + + A K
Sbjct: 169 RRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKM 228
Query: 412 ERAIKIFAKMR-QKLRPDIRTYELLFSLFGNVNAPYEEGNMFSQVDSAKRINAIEMDMAR 470
+ A+ +M+ L D+ Y L F + +F +V + R
Sbjct: 229 DEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEV------------LER 276
Query: 471 NNIQHSHISMKNLLKALGAEGMIR---ELIQYFCDSKTPLGTPTYNTVLHSLVEAQESHR 527
+ I+ L++ G ++ E+ ++ + TY ++ L ++
Sbjct: 277 GD-SPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKE 335
Query: 528 AMEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASALVSMMVRDGFYPQTMTYTALIK 587
A+++ M PNA TYNI+I+ A +V +M + P +TY L+
Sbjct: 336 ALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLG 395
Query: 588 ILLDYGDFDEALNLLDLVSLEG--IPHDVLLYNTILKKACEKGR----IDVIEFIIEQMH 641
L GD DEA LL L+ + DV+ YN ++ C++ R +D+ + ++E++
Sbjct: 396 GLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLG 455
Query: 642 QNKVQPDPSTCHFVFSGYVNCGFHNSAMEALQVLS 676
D T + + + + G N AME + +S
Sbjct: 456 AG----DRVTTNILLNSTLKAGDVNKAMELWKQIS 486
Score = 43.1 bits (100), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 74/165 (44%), Gaps = 2/165 (1%)
Query: 55 TQMQIVDALCRGERSRASHLLLNLG-HAHHSLGADDFFHILNYCARSPDPLFVMETWRMM 113
T ++D LC +++ + LLNL A + I+N + +E +M
Sbjct: 319 TYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELM 378
Query: 114 EEKEIGLNNKCYLLMMQALCKGGYLEEASNLIYF-LGERYGIYPILPVYNSFLGACAKLH 172
+++ +N Y +++ LC G L+EAS L+Y L + P + YN+ + K +
Sbjct: 379 KKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKEN 438
Query: 173 SMVHANLCLDLMDSRMVGKNEVTYTELLKLAVWQKNLSAVHEIWE 217
+ A DL+ ++ + VT LL + +++ E+W+
Sbjct: 439 RLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWK 483
Score = 42.4 bits (98), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 71/332 (21%), Positives = 135/332 (40%), Gaps = 12/332 (3%)
Query: 108 ETWRMMEEKEIGLNNKCYLLMMQALCKGGYLEEASNLIYFLGERYGIYPILPVYNSFLGA 167
E + M E+ + N Y ++ LC G +EA L+ + E+ P YN +
Sbjct: 303 EIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEK-DEEPNAVTYNIIINK 361
Query: 168 CAKLHSMVHANLCLDLMDSRMVGKNEVTYTELLKLAVWQKNLSAVHEIWEDYIKHYSLS- 226
K + A ++LM R + +TY LL + +L ++ +K S +
Sbjct: 362 LCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTD 421
Query: 227 --IFSLRKFVWSFTRLRDLKSAYETLQHMV-ALAMMGKLYINRTSEGRLRSSRLDIPIPL 283
+ S + + L A + +V L ++ N L++ ++ + L
Sbjct: 422 PDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMEL 481
Query: 284 -NALPVMKVLRWS--FSDVIHACGRTQNSGLAEQLMLQMQSLGLQPSSHTYDGFIRAIVS 340
+ K++R S ++ +I +T +A+ L+ +M+ LQPS Y+ + ++
Sbjct: 482 WKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCK 541
Query: 341 DRGLRNGMEVLKIMQQNNLKPQDSTIATLSVECSKALELDLAEALLDQISRCT-NPKPF- 398
+ L + + MQ++N P + + KA ++ AE+LL +SR +P F
Sbjct: 542 EGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFT 601
Query: 399 -SAFLAACDTMDKPERAIKIFAKM-RQKLRPD 428
S + + + AI F KM PD
Sbjct: 602 YSKLINRFLKLGYLDEAISFFDKMVDSGFEPD 633
Score = 38.9 bits (89), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 35/178 (19%), Positives = 76/178 (42%), Gaps = 1/178 (0%)
Query: 496 LIQYFCDSKTPLGTPTYNTVLHSLVEAQESHRAMEIFKQMKTCGIPPNAATYNIMIDCCS 555
+ Q DS + L N ++ LV ++ A +++M N + + +++C
Sbjct: 60 VFQQAVDSGSSLAFAG-NNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYV 118
Query: 556 IIRCFKSASALVSMMVRDGFYPQTMTYTALIKILLDYGDFDEALNLLDLVSLEGIPHDVL 615
+R A ++++M++ GF + L+K L + +A++LL + + DV
Sbjct: 119 QMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVF 178
Query: 616 LYNTILKKACEKGRIDVIEFIIEQMHQNKVQPDPSTCHFVFSGYVNCGFHNSAMEALQ 673
YNT+++ CE ++ + +M + T + + G + AM L+
Sbjct: 179 SYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLK 236
Score = 33.9 bits (76), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 42/98 (42%), Gaps = 4/98 (4%)
Query: 83 HSLGADDFFH---ILNYCARSPDPLFVMETWRMMEEKEIGLNNKCYLLMMQALCKGGYLE 139
LGA D +LN ++ D ME W+ + + +I N+ Y M+ CK G L
Sbjct: 452 EKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLN 511
Query: 140 EASNLIYFLGERYGIYPILPVYNSFLGACAKLHSMVHA 177
A L+ + + P + YN L + K S+ A
Sbjct: 512 VAKGLLCKM-RVSELQPSVFDYNCLLSSLCKEGSLDQA 548
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/385 (19%), Positives = 167/385 (43%), Gaps = 47/385 (12%)
Query: 294 WSFSDVIHACGRTQNSGLAEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRGLRNGMEVLKI 353
++ + +I+ R + A ++ ++ LG +P + T++ I+ + + + + ++
Sbjct: 124 YTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDR 183
Query: 354 MQQNNLKPQDSTIATLSVECSKALELDLAEALLDQISRCTNPKPFSAFLAACDTMDKPER 413
M +N +P T ++ ++ + LA LL ++ ER
Sbjct: 184 MVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKME---------------------ER 222
Query: 414 AIKIFAKMRQKLRPDIRTYELLFSLFGNVNAPYEEGNMFSQVDSAKRINAIEMDMARNNI 473
+K D+ TY + +++ +G + + + K +M I
Sbjct: 223 NVK----------ADVFTYSTI------IDSLCRDGCIDAAISLFK-------EMETKGI 259
Query: 474 QHSHISMKNLLKALGAEGMIRE---LIQYFCDSKTPLGTPTYNTVLHSLVEAQESHRAME 530
+ S ++ +L++ L G + L++ + T+N +L V+ + A E
Sbjct: 260 KSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANE 319
Query: 531 IFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASALVSMMVRDGFYPQTMTYTALIKILL 590
++K+M T GI PN TYN ++D + A+ ++ +MVR+ P +T+T+LIK
Sbjct: 320 LYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYC 379
Query: 591 DYGDFDEALNLLDLVSLEGIPHDVLLYNTILKKACEKGRIDVIEFIIEQMHQNKVQPDPS 650
D+ + + +S G+ + + Y+ +++ C+ G+I + E + ++M + V PD
Sbjct: 380 MVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVM 439
Query: 651 TCHFVFSGYVNCGFHNSAMEALQVL 675
T + G + G A+E + L
Sbjct: 440 TYGILLDGLCDNGKLEKALEIFEDL 464
Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 110/269 (40%), Gaps = 16/269 (5%)
Query: 421 MRQKLRPDIRTYELLFSLFGNVNAPYEEGNMFSQVDSAKRINAIEMDMARNNIQHSHISM 480
M+ PD T+ L + + EG + V R M N Q ++
Sbjct: 150 MKLGYEPDTTTFNTL------IKGLFLEGKVSEAVVLVDR-------MVENGCQPDVVTY 196
Query: 481 KNLLKAL---GAEGMIRELIQYFCDSKTPLGTPTYNTVLHSLVEAQESHRAMEIFKQMKT 537
+++ + G + +L++ + TY+T++ SL A+ +FK+M+T
Sbjct: 197 NSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMET 256
Query: 538 CGIPPNAATYNIMIDCCSIIRCFKSASALVSMMVRDGFYPQTMTYTALIKILLDYGDFDE 597
GI + TYN ++ + + L+ MV P +T+ L+ + + G E
Sbjct: 257 KGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQE 316
Query: 598 ALNLLDLVSLEGIPHDVLLYNTILKKACEKGRIDVIEFIIEQMHQNKVQPDPSTCHFVFS 657
A L + GI +++ YNT++ C + R+ +++ M +NK PD T +
Sbjct: 317 ANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIK 376
Query: 658 GYVNCGFHNSAMEALQVLSMRMLCEEVST 686
GY + M+ + +S R L T
Sbjct: 377 GYCMVKRVDDGMKVFRNISKRGLVANAVT 405
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 78/349 (22%), Positives = 134/349 (38%), Gaps = 29/349 (8%)
Query: 294 WSFSDVIHACGRTQNSGLAEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRGLRNGMEVLKI 353
+++S +I + R A L +M++ G++ S TY+ +R + +G +LK
Sbjct: 229 FTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKD 288
Query: 354 MQQNNLKPQDSTIATLSVECSKALELDLAEALLDQ-ISRCTNPK--PFSAFLAACDTMDK 410
M + P T L K +L A L + I+R +P ++ + ++
Sbjct: 289 MVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNR 348
Query: 411 PERAIKIFAKM-RQKLRPDIRTYELLFS-------------LFGNVNAPYEEGNM----- 451
A + M R K PDI T+ L +F N++ N
Sbjct: 349 LSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSI 408
Query: 452 ----FSQVDSAKRINAIEMDMARNNIQHSHISMKNLLKALGAEGMIRELIQYFCD---SK 504
F Q K + +M + + ++ LL L G + + ++ F D SK
Sbjct: 409 LVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSK 468
Query: 505 TPLGTPTYNTVLHSLVEAQESHRAMEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSAS 564
LG Y T++ + + + A +F + G+ PN TY +MI A+
Sbjct: 469 MDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEAN 528
Query: 565 ALVSMMVRDGFYPQTMTYTALIKILLDYGDFDEALNLLDLVSLEGIPHD 613
L+ M DG P TY LI+ L GD + L++ + G D
Sbjct: 529 ILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSAD 577
Score = 64.3 bits (155), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 87/404 (21%), Positives = 159/404 (39%), Gaps = 55/404 (13%)
Query: 295 SFSDVIHACGRTQNSGLAEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRGLRNGMEVLKIM 354
+++ +++ R+ ++ LA L+ +M+ ++ TY I ++ D + + + K M
Sbjct: 195 TYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEM 254
Query: 355 QQNNLKPQDSTIATLSVECSKALELDLAEALL-DQISRCTNPK--PFSAFLAACDTMDKP 411
+ +K T +L KA + + LL D +SR P F+ L K
Sbjct: 255 ETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKL 314
Query: 412 ERAIKIFAKM-RQKLRPDIRTYELLFSLFGNVNAPYEEGNMFSQVDSAKRINAIEMDMAR 470
+ A +++ +M + + P+I TY L + N E NM M R
Sbjct: 315 QEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDL-------------MVR 361
Query: 471 NNIQHSHISMKNLLKALGAEGMIRELIQYFCD-SKTPL--GTPTYNTVLHSLVEAQESHR 527
N ++ +L+K + + ++ F + SK L TY+ ++ ++ +
Sbjct: 362 NKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKL 421
Query: 528 AMEIFKQMKTCGIPPNAATYNIMID--C---------------------------CSIIR 558
A E+F++M + G+ P+ TY I++D C +II
Sbjct: 422 AEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIE 481
Query: 559 --C----FKSASALVSMMVRDGFYPQTMTYTALIKILLDYGDFDEALNLLDLVSLEGIPH 612
C + A L + G P MTYT +I L G EA LL + +G
Sbjct: 482 GMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAP 541
Query: 613 DVLLYNTILKKACEKGRIDVIEFIIEQMHQNKVQPDPSTCHFVF 656
+ YNT+++ G + +IE+M D S+ V
Sbjct: 542 NDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVI 585
Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 102/258 (39%), Gaps = 8/258 (3%)
Query: 436 FSLFGNVNAPYEEGNMFSQVDSAKRINAIEM--DMARNNIQHSHISMKNLLKALGAEGMI 493
FS N N + E + S + K+ +AI + +M R+ S + A+
Sbjct: 46 FSSISNGNVCFRE-RLRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQF 104
Query: 494 RELIQYFCDSKTPLGTP----TYNTVLHSLVEAQESHRAMEIFKQMKTCGIPPNAATYNI 549
L+ FC G T N +++ ++ A + ++ G P+ T+N
Sbjct: 105 -NLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNT 163
Query: 550 MIDCCSIIRCFKSASALVSMMVRDGFYPQTMTYTALIKILLDYGDFDEALNLLDLVSLEG 609
+I + A LV MV +G P +TY +++ + GD AL+LL +
Sbjct: 164 LIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERN 223
Query: 610 IPHDVLLYNTILKKACEKGRIDVIEFIIEQMHQNKVQPDPSTCHFVFSGYVNCGFHNSAM 669
+ DV Y+TI+ C G ID + ++M ++ T + + G G N
Sbjct: 224 VKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGA 283
Query: 670 EALQVLSMRMLCEEVSTL 687
L+ + R + V T
Sbjct: 284 LLLKDMVSREIVPNVITF 301
Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 119/283 (42%), Gaps = 28/283 (9%)
Query: 93 ILNYCARSPDPLFVMETWRMMEEKEIGLNNKCYLLMMQALCKGGYLEEASNLIYFLGERY 152
I+N RS D ++ R MEE+ + + Y ++ +LC+ G ++ A +L + E
Sbjct: 199 IVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEM-ETK 257
Query: 153 GIYPILPVYNSFLGACAKLHSMVHANLCLDLMDSRMVGKNEVTYTELLKLAVWQKNLSAV 212
GI + YNS + K L L M SR + N +T+ LL + V + L
Sbjct: 258 GIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEA 317
Query: 213 HEIWEDYI-KHYSLSIFSLRKFVWSFTRLRDLKSAYETLQHMV-----------ALAMMG 260
+E++++ I + S +I + + + L A L MV + G
Sbjct: 318 NELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKG 377
Query: 261 KLYINRTSEG----RLRSSRLDIPIPLNALPVMKVLRWSFSDVIHACGRTQNSGLAEQLM 316
+ R +G R S R + NA+ ++S ++ ++ LAE+L
Sbjct: 378 YCMVKRVDDGMKVFRNISKR---GLVANAV--------TYSILVQGFCQSGKIKLAEELF 426
Query: 317 LQMQSLGLQPSSHTYDGFIRAIVSDRGLRNGMEVLKIMQQNNL 359
+M S G+ P TY + + + L +E+ + +Q++ +
Sbjct: 427 QEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKM 469
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 57/112 (50%), Gaps = 1/112 (0%)
Query: 107 METWRMMEEKEIGLNNKCYLLMMQALCKGGYLEEASNLIYFLGERYGIYPILPVYNSFLG 166
+E + +++ ++ L Y +++ +CKGG +E+A NL L + G+ P + Y +
Sbjct: 458 LEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCK-GVKPNVMTYTVMIS 516
Query: 167 ACAKLHSMVHANLCLDLMDSRMVGKNEVTYTELLKLAVWQKNLSAVHEIWED 218
K S+ AN+ L M+ N+ TY L++ + +L+A ++ E+
Sbjct: 517 GLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEE 568
>sp|Q9LYZ9|PP362_ARATH Pentatricopeptide repeat-containing protein At5g02860
OS=Arabidopsis thaliana GN=At5g02860 PE=2 SV=1
Length = 819
Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 95/442 (21%), Positives = 165/442 (37%), Gaps = 71/442 (16%)
Query: 289 MKVLRWSFSDVIHAC-----GRTQNSGLAEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRG 343
MK +S+ V + G++ A +++ +M G PS TY+ I A D
Sbjct: 305 MKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGM 364
Query: 344 LRNGMEVLKIMQQNNLKPQDSTIATLSVECSKALELDLAEALLDQISRCTNPKP----FS 399
L ME+ M + KP T TL +A +++ A ++ +++ R KP F+
Sbjct: 365 LDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEM-RNAGCKPNICTFN 423
Query: 400 AFLAACDTMDKPERAIKIFAKMRQ-KLRPDIRTYELLFSLFGNVNAPYEEGNMFSQVDSA 458
AF+ K +KIF ++ L PDI T+ L ++FG E +F ++ A
Sbjct: 424 AFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRA 483
Query: 459 ----------------KRINAIEMDMA------RNNIQHSHISMKNLLKALGAEGMIRE- 495
R + E M + + +L AL GM +
Sbjct: 484 GFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQS 543
Query: 496 --LIQYFCDSKTPLGTPTYNTVLHSLVEAQE----------------SHRAM-------- 529
++ D + TY ++LH+ +E RA+
Sbjct: 544 EKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLV 603
Query: 530 -----------EIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASALVSMMVRDGFYPQ 578
F ++K G P+ T N M+ + A+ ++ M GF P
Sbjct: 604 CSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPS 663
Query: 579 TMTYTALIKILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILKKACEKGRIDVIEFIIE 638
TY +L+ + DF ++ +L + +GI D++ YNT++ C R+ I
Sbjct: 664 MATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFS 723
Query: 639 QMHQNKVQPDPSTCHFVFSGYV 660
+M + + PD T + Y
Sbjct: 724 EMRNSGIVPDVITYNTFIGSYA 745
Score = 80.9 bits (198), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 92/455 (20%), Positives = 172/455 (37%), Gaps = 69/455 (15%)
Query: 299 VIHACGRTQNSGLAEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRGLRNGMEVLKIMQQNN 358
+I G+ A + +Q G ++Y I A + R + V K M+++
Sbjct: 179 IISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDG 238
Query: 359 LKPQDSTI-ATLSVECSKALELDLAEALLDQISR---CTNPKPFSAFLAACDTMDKPERA 414
KP T L+V + +L++++ + ++ + C + A
Sbjct: 239 CKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEA 298
Query: 415 IKIFAKMRQK-LRPDIRTYELLFSLFGNVNAPYEEGNMFSQVDSAKRINAIEMDMARNNI 473
++F +M+ D TY L ++G + P E + K +N +M N
Sbjct: 299 AQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKE---------AMKVLN----EMVLNGF 345
Query: 474 QHSHISMKNLLKALGAEGMIRELIQY---FCDSKTPLGTPTYNTVLHSLVEAQESHRAME 530
S ++ +L+ A +GM+ E ++ + T TY T+L A + AM
Sbjct: 346 SPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMS 405
Query: 531 IFKQMKTCGIPPNAATYNIMI-------------------DCC----------SIIRCF- 560
IF++M+ G PN T+N I + C +++ F
Sbjct: 406 IFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFG 465
Query: 561 -----KSASALVSMMVRDGFYPQTMTYTALIKILLDYGDFDEALNLLDLVSLEGIPHDVL 615
S + M R GF P+ T+ LI G F++A+ + + G+ D+
Sbjct: 466 QNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLS 525
Query: 616 LYNTILKKACEKGRIDVIEFIIEQMHQNKVQPDPSTCHFVFSGYVN---CGFHNSAME-- 670
YNT+L G + E ++ +M + +P+ T + Y N G +S E
Sbjct: 526 TYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEV 585
Query: 671 --------ALQVLSMRMLCEEVSTLEEKRSDFEDL 697
A+ + ++ ++C + L E F +L
Sbjct: 586 YSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSEL 620
Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 146/344 (42%), Gaps = 28/344 (8%)
Query: 293 RWSFSDVIHACGRTQNSGLAEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRGLRNGMEVLK 352
R +F+ +I A R + A + +M G+ P TY+ + A+ +VL
Sbjct: 489 RETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLA 548
Query: 353 IMQQNNLKPQDSTIATLSVECSKALELDLAEALLDQI-SRCTNP-----KPFSAFLAACD 406
M+ KP + T +L + E+ L +L +++ S P K + CD
Sbjct: 549 EMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCD 608
Query: 407 TMDKPERAIKIFAKMRQK-LRPDIRTYELLFSLFGNVNAPYEEGNMFSQVDSAKRINAIE 465
+ + ERA F++++++ PDI T + S++G + + +D K
Sbjct: 609 LLPEAERA---FSELKERGFSPDITTLNSMVSIYGRRQMVAKANGV---LDYMKERGFTP 662
Query: 466 MDMARNNIQHSHISMKNLLKALGAEGMIRELIQYFCDSKTPLGTPTYNTVLHSLVEAQES 525
N++ + H + K+ E ++RE++ +YNTV+++
Sbjct: 663 SMATYNSLMYMHSRSADFGKS---EEILREILA----KGIKPDIISYNTVIYAYCRNTRM 715
Query: 526 HRAMEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASALVSMMVRDGFYPQTMTYTAL 585
A IF +M+ GI P+ TYN I + F+ A +V M++ G P TY ++
Sbjct: 716 RDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSI 775
Query: 586 IKILLDYGDFDEA-LNLLDLVSLEGIPH-----DVLLYNTILKK 623
+ DEA L + DL +L+ PH D+ L I+KK
Sbjct: 776 VDGYCKLNRKDEAKLFVEDLRNLD--PHAPKGEDLRLLERIVKK 817
>sp|Q8L844|PP413_ARATH Pentatricopeptide repeat-containing protein At5g42310,
mitochondrial OS=Arabidopsis thaliana GN=At5g42310 PE=2
SV=1
Length = 709
Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 106/544 (19%), Positives = 212/544 (38%), Gaps = 74/544 (13%)
Query: 125 YLLMMQALCKGGYLEEASNLIYFLGERYGIYPILPVYNSFLGACAKLHSMVHANLCLDLM 184
Y +++ AL + L EA + L ++ + P+ YN+ +GACA+ + + A + M
Sbjct: 170 YSILIHALGRSEKLYEA----FLLSQKQTLTPL--TYNALIGACARNNDIEKALNLIAKM 223
Query: 185 DSRMVGKNEVTYTELLKLAVWQKNLSAV------HEIWEDYIKHYSLSIFSLRKFVWSFT 238
+ V Y+ +++ + +V EI D ++ L + + + F
Sbjct: 224 RQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLE---LDVQLVNDIIMGFA 280
Query: 239 RLRDLKSAYETLQHMVALAMMGKLYINRTSEGRLRSSRLDIPIPLNALPVMKVLRWSFSD 298
+ D A + L A + K +
Sbjct: 281 KSGDPSKALQLLGMAQATGLSAKTA-------------------------------TLVS 309
Query: 299 VIHACGRTQNSGLAEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRGLRNGMEVLKIMQQNN 358
+I A + + AE L +++ G++P + Y+ ++ V L++ ++ M++
Sbjct: 310 IISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRG 369
Query: 359 LKPQDSTIATLSVECSKALELDLAEALLDQISRC---TNPKPFSAFLAACDTMDKPERAI 415
+ P + T + L A + A +L ++ N FS LA + ++
Sbjct: 370 VSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTF 429
Query: 416 KIFAKMRQ-KLRPDIRTYELLFSLFGNVNAPYEEGNMFSQVDSAKRINAIEMDMARNNI- 473
++ +M+ ++PD + Y ++ FG N F ++ S IE D N
Sbjct: 430 QVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLS----EGIEPDRVTWNTL 485
Query: 474 -----QHS-HISMKNLLKALGAEGMIRELIQYFCDSKTPLGTPTYNTVLHSLVEAQESHR 527
+H HI + + +A+ G + P T TYN +++S + +
Sbjct: 486 IDCHCKHGRHIVAEEMFEAMERRGCL------------PCAT-TYNIMINSYGDQERWDD 532
Query: 528 AMEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASALVSMMVRDGFYPQTMTYTALIK 587
+ +MK+ GI PN T+ ++D F A + M G P + Y ALI
Sbjct: 533 MKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALIN 592
Query: 588 ILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILKKACEKGRIDVIEFIIEQMHQNKVQP 647
G ++A+N +++ +G+ +L N+++ E R +++ M +N V+P
Sbjct: 593 AYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKP 652
Query: 648 DPST 651
D T
Sbjct: 653 DVVT 656
Score = 73.6 bits (179), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 148/340 (43%), Gaps = 26/340 (7%)
Query: 347 GMEVLKIMQQNNLKPQDSTIATLSVECSKALELDLAEALLDQISRCTNPKP----FSAFL 402
+++L + Q L + +T+ ++ + + AEAL +++ R + KP ++A L
Sbjct: 288 ALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEEL-RQSGIKPRTRAYNALL 346
Query: 403 AACDTMDKPERAIKIFAKMRQK-LRPDIRTYELLFSLFGNVNAPYEEGNMFSQVDSAKRI 461
+ A + ++M ++ + PD TY LL + VNA E + RI
Sbjct: 347 KGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAY--VNAGRWE---------SARI 395
Query: 462 NAIEMDMARNNIQHSHISMKNLLKALGAEGMIRELIQYFCDSKTPLGTPT---YNTVLHS 518
EM+ ++Q + LL G ++ Q + K+ P YN V+ +
Sbjct: 396 VLKEMEAG--DVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDT 453
Query: 519 LVEAQESHRAMEIFKQMKTCGIPPNAATYNIMIDC-CSIIRCFKSASALVSMMVRDGFYP 577
+ AM F +M + GI P+ T+N +IDC C R A + M R G P
Sbjct: 454 FGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHI-VAEEMFEAMERRGCLP 512
Query: 578 QTMTYTALIKILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILKKACEKGRI-DVIEFI 636
TY +I D +D+ LL + +GI +V+ + T++ + GR D IE
Sbjct: 513 CATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIE-C 571
Query: 637 IEQMHQNKVQPDPSTCHFVFSGYVNCGFHNSAMEALQVLS 676
+E+M ++P + + + + Y G A+ A +V++
Sbjct: 572 LEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMT 611
Score = 63.9 bits (154), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 77/389 (19%), Positives = 161/389 (41%), Gaps = 24/389 (6%)
Query: 295 SFSDVIHACGRTQNSGLAEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRGLRNGM--EVLK 352
+++ +I AC R + A L+ +M+ G Q Y I+++ + + M + K
Sbjct: 199 TYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYK 258
Query: 353 IMQQNNLKPQDSTIATL------SVECSKALEL-DLAEALLDQISRCTNPKPFSAFLAAC 405
++++ L+ + + S + SKAL+L +A+A T SA +
Sbjct: 259 EIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSG 318
Query: 406 DTMDKPERAIKIFAKMRQK-LRPDIRTYELLFSLFGNVNAPYEEGNMFSQVDSAKRINAI 464
T++ A +F ++RQ ++P R Y L + + +M S+++ KR +
Sbjct: 319 RTLE----AEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEME--KR--GV 370
Query: 465 EMDMARNNIQHSHISMKNLLKALGAEGMIRELIQYFCDSKTPLGTPTYNTVLHSLVEAQE 524
D +H++ + + G R +++ + ++ +L + E
Sbjct: 371 SPD------EHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGE 424
Query: 525 SHRAMEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASALVSMMVRDGFYPQTMTYTA 584
+ ++ K+MK+ G+ P+ YN++ID C A M+ +G P +T+
Sbjct: 425 WQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNT 484
Query: 585 LIKILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILKKACEKGRIDVIEFIIEQMHQNK 644
LI +G A + + + G YN ++ ++ R D ++ ++ +M
Sbjct: 485 LIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQG 544
Query: 645 VQPDPSTCHFVFSGYVNCGFHNSAMEALQ 673
+ P+ T + Y G N A+E L+
Sbjct: 545 ILPNVVTHTTLVDVYGKSGRFNDAIECLE 573
Score = 63.2 bits (152), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 68/330 (20%), Positives = 125/330 (37%), Gaps = 36/330 (10%)
Query: 381 LAEALLDQISRCTNPKPFSAFLAACDTMDKPERAIKIFAKMRQK-LRPDIRTYELLFSLF 439
L EA L + P ++A + AC + E+A+ + AKMRQ + D Y L+
Sbjct: 183 LYEAFLLSQKQTLTPLTYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSL 242
Query: 440 GNVNAP--------YEEGNMFSQVDSAKRINAIEMDMARNNIQHSHISMKNLLKALG--- 488
N Y+E + +N I M A++ + + + +A G
Sbjct: 243 TRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSA 302
Query: 489 --------------------AEGMIRELIQYFCDSKTPLGTPTYNTVLHSLVEAQESHRA 528
AE + EL Q S T YN +L V+ A
Sbjct: 303 KTATLVSIISALADSGRTLEAEALFEELRQ----SGIKPRTRAYNALLKGYVKTGPLKDA 358
Query: 529 MEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASALVSMMVRDGFYPQTMTYTALIKI 588
+ +M+ G+ P+ TY+++ID ++SA ++ M P + ++ L+
Sbjct: 359 ESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAG 418
Query: 589 LLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILKKACEKGRIDVIEFIIEQMHQNKVQPD 648
D G++ + +L + G+ D YN ++ + +D ++M ++PD
Sbjct: 419 FRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPD 478
Query: 649 PSTCHFVFSGYVNCGFHNSAMEALQVLSMR 678
T + + + G H A E + + R
Sbjct: 479 RVTWNTLIDCHCKHGRHIVAEEMFEAMERR 508
>sp|Q940A6|PP325_ARATH Pentatricopeptide repeat-containing protein At4g19440,
chloroplastic OS=Arabidopsis thaliana GN=At4g19440 PE=2
SV=2
Length = 838
Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 120/566 (21%), Positives = 219/566 (38%), Gaps = 77/566 (13%)
Query: 119 GLNNKCYLLM--MQALCKGGYLEEASNLIYFLGERYGIYPILPVYNSF---LGACAKLHS 173
G++ YL + A CKGG +EEA L + E G+ P + +N+ LG C +
Sbjct: 268 GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKM-EEAGVAPNVVTFNTVIDGLGMCGRYD- 325
Query: 174 MVHANLCLDLMDSRMVGKNEVTYTELLKLAVWQKNLSAVHEIWEDYIKHYSLSIFSLRKF 233
A + + M R + +TY+ L+K
Sbjct: 326 --EAFMFKEKMVERGMEPTLITYSILVK-------------------------------- 351
Query: 234 VWSFTRLRDLKSAYETLQHMVALAMMGKLYI-NRTSEGRLRSSRLDIPIPLNALPVMKVL 292
TR + + AY L+ M + + N + + + L+ I + L V K L
Sbjct: 352 --GLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGL 409
Query: 293 RWS---FSDVIHACGRTQNSGLAEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRGLRNGME 349
+ ++ +I + + AE+L+ +M S+G + ++ I + S + +
Sbjct: 410 SLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALR 469
Query: 350 VLKIMQQNNLKPQDSTIATL-SVEC-----SKALELDLAEALLDQISRCTNPKPFSAFLA 403
+ M N+ P + TL S C SKALEL L++ + + +A L
Sbjct: 470 FVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQ--FLNK-GFVVDTRTSNALLH 526
Query: 404 ACDTMDKPERAIKIFAKMRQKLRPDIRTYELLFSLFGNVNAPYEEGNMFSQVDSAKRINA 463
K + A +I ++ + G V + S K+++
Sbjct: 527 GLCEAGKLDEAFRIQKEILGR---------------GCVMDRVSYNTLISGCCGKKKLDE 571
Query: 464 IEM---DMARNNIQHSHISMKNLLKALGAEGMIRELIQYFCDSKTPLGTP---TYNTVLH 517
M +M + ++ + + L+ L + E IQ++ D K P TY+ ++
Sbjct: 572 AFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMID 631
Query: 518 SLVEAQESHRAMEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASALVSMMVRDGFYP 577
+A+ + E F +M + + PN YN +I A L M G P
Sbjct: 632 GCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISP 691
Query: 578 QTMTYTALIKILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILKKACEKGRIDVIEFII 637
+ TYT+LIK + +EA L + + +EG+ +V Y ++ + G++ +E ++
Sbjct: 692 NSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLL 751
Query: 638 EQMHQNKVQPDPSTCHFVFSGYVNCG 663
+MH V P+ T + GY G
Sbjct: 752 REMHSKNVHPNKITYTVMIGGYARDG 777
Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 88/385 (22%), Positives = 154/385 (40%), Gaps = 33/385 (8%)
Query: 298 DVIHACGRTQNSGLAEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRGLRNGMEVLKIMQQN 357
D + CGR + + ++ M++ G++P+ TY ++ + + + + VLK M +
Sbjct: 316 DGLGMCGRYDEAFMFKEKMVER---GMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKK 372
Query: 358 NLKPQDSTIATLSVECSKALELDLAEALLDQISRCTNPKPFSAFLAACDTMDKPERAIKI 417
P L +A L+ A + D + K S + +T+ IK
Sbjct: 373 GFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMV----SKGLSLTSSTYNTL------IKG 422
Query: 418 FAKMRQKLRPDIRTYELLFSLFGNVNAPYEEGNMFSQV---------DSAKRINAIEMDM 468
+ K Q + R + + S+ NVN +G+ S + DSA R +M
Sbjct: 423 YCKNGQADNAE-RLLKEMLSIGFNVN----QGSFTSVICLLCSHLMFDSALRFVG---EM 474
Query: 469 ARNNIQHSHISMKNLLKAL---GAEGMIRELIQYFCDSKTPLGTPTYNTVLHSLVEAQES 525
N+ + L+ L G EL F + + T T N +LH L EA +
Sbjct: 475 LLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKL 534
Query: 526 HRAMEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASALVSMMVRDGFYPQTMTYTAL 585
A I K++ G + +YN +I C + A + MV+ G P TY+ L
Sbjct: 535 DEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSIL 594
Query: 586 IKILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILKKACEKGRIDVIEFIIEQMHQNKV 645
I L + +EA+ D G+ DV Y+ ++ C+ R + + ++M V
Sbjct: 595 ICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNV 654
Query: 646 QPDPSTCHFVFSGYVNCGFHNSAME 670
QP+ + + Y G + A+E
Sbjct: 655 QPNTVVYNHLIRAYCRSGRLSMALE 679
Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 77/162 (47%)
Query: 512 YNTVLHSLVEAQESHRAMEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASALVSMMV 571
+ T +++ + + A+++F +M+ G+ PN T+N +ID + + A MV
Sbjct: 276 FTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMV 335
Query: 572 RDGFYPQTMTYTALIKILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILKKACEKGRID 631
G P +TY+ L+K L +A +L ++ +G P +V++YN ++ E G ++
Sbjct: 336 ERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLN 395
Query: 632 VIEFIIEQMHQNKVQPDPSTCHFVFSGYVNCGFHNSAMEALQ 673
I + M + ST + + GY G ++A L+
Sbjct: 396 KAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLK 437
Score = 63.9 bits (154), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 129/290 (44%), Gaps = 21/290 (7%)
Query: 347 GMEVLKIMQQNNLKPQDSTIATLSVECSKALELDLAEALLDQISRCTNPKPF---SAFLA 403
++V ++ + P +T L +A E D + + +P + +A A
Sbjct: 223 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINA 282
Query: 404 ACDTMDKPERAIKIFAKMRQK-LRPDIRTYELLFSLFGNVNAPYEEGNMFSQVDSAKRIN 462
C K E A+K+F+KM + + P++ T+ + G + Y+E MF +
Sbjct: 283 FCKG-GKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLG-MCGRYDEAFMFKE-------K 333
Query: 463 AIEMDMARNNIQHSHISMKNLLKA--LG-AEGMIRELIQYFCDSKTPLGTPTYNTVLHSL 519
+E M I +S I +K L +A +G A +++E+ + P YN ++ S
Sbjct: 334 MVERGMEPTLITYS-ILVKGLTRAKRIGDAYFVLKEMTK----KGFPPNVIVYNNLIDSF 388
Query: 520 VEAQESHRAMEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASALVSMMVRDGFYPQT 579
+EA ++A+EI M + G+ ++TYN +I +A L+ M+ GF
Sbjct: 389 IEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQ 448
Query: 580 MTYTALIKILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILKKACEKGR 629
++T++I +L + FD AL + + L + L T++ C+ G+
Sbjct: 449 GSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGK 498
Score = 44.7 bits (104), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 47/100 (47%), Gaps = 1/100 (1%)
Query: 569 MMVRDGFYPQTMTYTALIKILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILKKACEKG 628
++ G +P T L+ L+ +F + D+V +G+ DV L+ T + C+ G
Sbjct: 229 VLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVC-KGVSPDVYLFTTAINAFCKGG 287
Query: 629 RIDVIEFIIEQMHQNKVQPDPSTCHFVFSGYVNCGFHNSA 668
+++ + +M + V P+ T + V G CG ++ A
Sbjct: 288 KVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEA 327
Score = 41.6 bits (96), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 59/133 (44%), Gaps = 5/133 (3%)
Query: 528 AMEIFKQMKTCGIPPNAATYNIMIDCCSIIRC--FKSASALVSMMVRDGFYPQTMTYTAL 585
A+++F + G+ P+ T NI++ S++R F+ ++ + G P +T
Sbjct: 223 ALDVFPVLANKGMFPSKTTCNILLT--SLVRANEFQKCCEAFDVVCK-GVSPDVYLFTTA 279
Query: 586 IKILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILKKACEKGRIDVIEFIIEQMHQNKV 645
I G +EA+ L + G+ +V+ +NT++ GR D E+M + +
Sbjct: 280 INAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGM 339
Query: 646 QPDPSTCHFVFSG 658
+P T + G
Sbjct: 340 EPTLITYSILVKG 352
Score = 37.4 bits (85), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 66/331 (19%), Positives = 127/331 (38%), Gaps = 35/331 (10%)
Query: 107 METWRMMEEKEIGLNNKCYLLMMQALCKGGYLEEASNLIYFLGERYGIYPILPVYNSFLG 166
+E W K ++ + ++ LC+ G L+EA + + R G YN+ +
Sbjct: 503 LELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGR-GCVMDRVSYNTLIS 561
Query: 167 ACAKLHSMVHANLCLDLMDSRMVGKNEVTYTELLKLAVWQKNLSAVHEIWEDYIKHYSLS 226
C + A + LD M R + + TY+ L+ + + W+D ++ L
Sbjct: 562 GCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLP 621
Query: 227 IFSLRKFVWSFTRLRDLKSAYETLQHMVALAMMGKLYINRTSEGRLRSSRLDIPIPLNAL 286
V++++ + D G RT EG+ D + N
Sbjct: 622 D------VYTYSVMID-----------------GCCKAERTEEGQ---EFFDEMMSKNVQ 655
Query: 287 PVMKVLRWSFSDVIHACGRTQNSGLAEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRGLRN 346
P V ++ +I A R+ +A +L M+ G+ P+S TY I+ + +
Sbjct: 656 PNTVV----YNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEE 711
Query: 347 GMEVLKIMQQNNLKPQDSTIATLSVECSKALELDLAEALLDQI-SRCTNPKP--FSAFLA 403
+ + M+ L+P L K ++ E LL ++ S+ +P ++ +
Sbjct: 712 AKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIG 771
Query: 404 ACDTMDKPERAIKIFAKMRQK-LRPDIRTYE 433
A ++ +MR+K + PD TY+
Sbjct: 772 GYARDGNVTEASRLLNEMREKGIVPDSITYK 802
>sp|Q9LYT2|PP287_ARATH Pentatricopeptide repeat-containing protein At3g59040
OS=Arabidopsis thaliana GN=At3g59040 PE=2 SV=2
Length = 583
Score = 81.3 bits (199), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/388 (20%), Positives = 150/388 (38%), Gaps = 60/388 (15%)
Query: 294 WSFSDV-----IHACGRTQNSGLAEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRGLRNGM 348
W+FS++ I A G+ N AE+++ + +G P+ +Y + + N
Sbjct: 135 WNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAE 194
Query: 349 EVLKIMQQNNLKPQDST---IATLSVECSKALELD-LAEALLDQISRCTNP--KPFSAFL 402
+ + MQ + +P T I VE K E + + E LLD+ P K + +
Sbjct: 195 AIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMI 254
Query: 403 AACDTMDKPERAIKIFAKMRQKLRPD-IRTYELLFSLFGNVNAPYEEGNMFSQVDSAKRI 461
E+A K+F+ M K P TY L S S K +
Sbjct: 255 YMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSF----------------ETSYKEV 298
Query: 462 NAIEMDMARNNIQHSHISMKNLLKALGAEGMIRELIQYFCDSKTPLGTPTYNTVLHSLVE 521
+ I M R++IQ +S L+KA G
Sbjct: 299 SKIYDQMQRSDIQPDVVSYALLIKAYG--------------------------------R 326
Query: 522 AQESHRAMEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASALVSMMVRDGFYPQTMT 581
A+ A+ +F++M G+ P YNI++D +I + A + M RD +P +
Sbjct: 327 ARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWS 386
Query: 582 YTALIKILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILKKACEKGRIDVIEFIIEQMH 641
YT ++ ++ D + A + ++G +++ Y T++K + ++ + + E+M
Sbjct: 387 YTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMR 446
Query: 642 QNKVQPDPSTCHFVFSGYVNCGFHNSAM 669
+ ++ + + + C SA+
Sbjct: 447 LSGIKANQTILTTIMDASGRCKNFGSAL 474
Score = 70.5 bits (171), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 71/344 (20%), Positives = 134/344 (38%), Gaps = 20/344 (5%)
Query: 295 SFSDVIHACGRTQNSGLAEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRGLRNGMEVLKIM 354
S++ ++ + GR AE + +MQS G +PS+ TY ++ V + EV + +
Sbjct: 176 SYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETL 235
Query: 355 ---QQNNLKPQDSTIATLSVECSKALELDLAEALLDQISRCTNPKPFSAFLAACDTMDKP 411
+++ LKP + KA + A + + P+ + +
Sbjct: 236 LDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSY 295
Query: 412 ERAIKIFAKM-RQKLRPDIRTYELLFSLFGNVNAPYEEGNMFSQVDSAKRINAIEMDMAR 470
+ KI+ +M R ++PD+ +Y LL +G E ++F ++ A
Sbjct: 296 KEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDA------------ 343
Query: 471 NNIQHSHISMKNLLKALGAEGMIRELIQYFCDSKTPLGTP---TYNTVLHSLVEAQESHR 527
++ +H + LL A GM+ + F + P +Y T+L + V A +
Sbjct: 344 -GVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEG 402
Query: 528 AMEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASALVSMMVRDGFYPQTMTYTALIK 587
A + FK++K G PN TY +I + + + M G T ++
Sbjct: 403 AEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMD 462
Query: 588 ILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILKKACEKGRID 631
+F AL + G+P D N +L A + ++
Sbjct: 463 ASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELE 506
Score = 37.0 bits (84), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 55/314 (17%), Positives = 118/314 (37%), Gaps = 39/314 (12%)
Query: 124 CYLLMMQALCKGGYLEEASNLIYFL--GERYGIYPILPVYNSFLGACAKLHSMVHANLCL 181
Y ++++ +G +EA + L ++ + P +Y+ + K + A
Sbjct: 211 TYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVF 270
Query: 182 DLMDSRMVGKNEVTYTELLKLAVWQKNLSAVHEIWEDYIKHYSLS--IFSLRKFVWSFTR 239
M + V ++ VTY L+ K +S ++ D ++ + + S + ++ R
Sbjct: 271 SSMVGKGVPQSTVTYNSLMSFETSYKEVSKIY----DQMQRSDIQPDVVSYALLIKAYGR 326
Query: 240 LRDLKSAYETLQHMV----------------ALAMMGKLYINRTSEGRLRSSRLDIPIPL 283
R + A + M+ A A+ G + +T +R R+
Sbjct: 327 ARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRI------ 380
Query: 284 NALPVMKVLRWSFSDVIHACGRTQNSGLAEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRG 343
P + WS++ ++ A + AE+ +++ G +P+ TY I+
Sbjct: 381 --FPDL----WSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKAND 434
Query: 344 LRNGMEVLKIMQQNNLKPQDSTIATLSVECSKALELDLAEALLDQISRCTNP---KPFSA 400
+ MEV + M+ + +K + + T+ + A ++ C P K +
Sbjct: 435 VEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNV 494
Query: 401 FLAACDTMDKPERA 414
L+ T D+ E A
Sbjct: 495 LLSLASTQDELEEA 508
Score = 36.6 bits (83), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 69/173 (39%), Gaps = 21/173 (12%)
Query: 549 IMIDCCSIIRCFKSASALVSMMVRDGFYPQTMTYTALIKILLDYGDFDEALNLLDLVSLE 608
++I + F A ++S++ + G P ++YTAL++ G + A + +
Sbjct: 144 MLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSS 203
Query: 609 GIPHDVLLYNTILKKACEKGRIDVIEFIIEQMHQNK---VQPDPSTCHF----------- 654
G + Y ILK E + E + E + K ++PD H
Sbjct: 204 GPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNY 263
Query: 655 -----VFSGYVNCGFHNSAMEALQVLSMRMLCEEVSTLEE--KRSDFEDLILA 700
VFS V G S + ++S +EVS + + +RSD + +++
Sbjct: 264 EKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQPDVVS 316
>sp|Q8GZ63|PP397_ARATH Pentatricopeptide repeat-containing protein At5g25630
OS=Arabidopsis thaliana GN=At5g25630 PE=2 SV=2
Length = 574
Score = 80.9 bits (198), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 85/384 (22%), Positives = 165/384 (42%), Gaps = 45/384 (11%)
Query: 296 FSDVIHACGRTQNSGLAEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRGLRNGMEVLKIMQ 355
F+ VI+A + N A Q +L+M+ LGL P++ TY+ I+ G+
Sbjct: 118 FNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGY----GIAG--------- 164
Query: 356 QNNLKPQDSTIATLSVECSKALELDLAEALLDQISRCTNPKPFSAFLAACDTMDKPERAI 415
KP+ S S+ L+L L E +D N + F+ + A K E A
Sbjct: 165 ----KPERS---------SELLDLMLEEGNVDV---GPNIRTFNVLVQAWCKKKKVEEAW 208
Query: 416 KIFAKMRQ-KLRPDIRTYELLFSLFGNVNAPYEEGNMFSQVDSAKRINAIEMDMARNNIQ 474
++ KM + +RPD TY + + + ++G + +S + + A+ N +
Sbjct: 209 EVVKKMEECGVRPDTVTYNTIATCY------VQKGETV-RAESEVVEKMVMKEKAKPNGR 261
Query: 475 HSHISMKNLLKALGAEGMIRE---LIQYFCDSKTPLGTPTYNTVLHSLVEAQESHRAMEI 531
I + + EG +R+ ++ + + +N++++ VE + E+
Sbjct: 262 TCGIVVGGYCR----EGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEV 317
Query: 532 FKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASALVSMMVRDGFYPQTMTYTALIKILLD 591
MK C + + TY+ +++ S + A+ + MV+ G P Y+ L K +
Sbjct: 318 LTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVR 377
Query: 592 YGDFDEALNLLDLVSLEGIPHDVLLYNTILKKACEKGRIDVIEFIIEQMHQNKVQPDPST 651
+ +A LL+ + +E P +V+++ T++ C G +D + +M + V P+ T
Sbjct: 378 AKEPKKAEELLETLIVESRP-NVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKT 436
Query: 652 CHFVFSGYVNCGFHNSAMEALQVL 675
+ GY+ A E LQ++
Sbjct: 437 FETLMWGYLEVKQPWKAEEVLQMM 460
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/187 (21%), Positives = 82/187 (43%), Gaps = 38/187 (20%)
Query: 515 VLHSLVEAQESHRAMEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASALVSMMVRDG 574
+++ L+E H A +FK + G P+ +Y ++ ++ + + S S++VS + + G
Sbjct: 51 LMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSG 110
Query: 575 ------FY-----------------------------PQTMTYTALIKILLDYGDFDEAL 599
F+ P T TY LIK G + +
Sbjct: 111 TKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSS 170
Query: 600 NLLDLVSLEG---IPHDVLLYNTILKKACEKGRIDVIEFIIEQMHQNKVQPDPSTCHFVF 656
LLDL+ EG + ++ +N +++ C+K +++ ++++M + V+PD T + +
Sbjct: 171 ELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIA 230
Query: 657 SGYVNCG 663
+ YV G
Sbjct: 231 TCYVQKG 237
Score = 33.5 bits (75), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 22/114 (19%), Positives = 49/114 (42%), Gaps = 2/114 (1%)
Query: 563 ASALVSMMVRDGFYPQTMTYTALIKILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILK 622
A + + G P ++YT L+ + + +++ V G D + +N ++
Sbjct: 64 AQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVIN 123
Query: 623 KACEKGRI-DVIEFIIEQMHQNKVQPDPSTCHFVFSGYVNCGFHNSAMEALQVL 675
E G + D ++ ++ +M + + P ST + + GY G + E L ++
Sbjct: 124 AFSESGNMEDAVQALL-KMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLM 176
>sp|Q9FKR3|PP404_ARATH Pentatricopeptide repeat-containing protein At5g38730
OS=Arabidopsis thaliana GN=At5g38730 PE=2 SV=1
Length = 596
Score = 80.9 bits (198), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 99/496 (19%), Positives = 198/496 (39%), Gaps = 45/496 (9%)
Query: 215 IWEDYIKHYSLSIFSLRKFVWSFTRLRDLKSAYETLQHMVALAMMGKLYINRTSEGRLRS 274
IW D + S+ S K + T+ + K+A++ L + ++ + R+ G +
Sbjct: 68 IWTDSLPSSKHSLQSSWKMILILTKHKHFKTAHQLLDKLAQRELLSSPLVLRSLVGGVSE 127
Query: 275 SRLDIPIPLNALPVMKVLRWSFSDVI---------------HACGRTQNSGLAEQL---- 315
D+ + L + +D I AC NS + ++L
Sbjct: 128 DPEDVSHVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTV 187
Query: 316 ---MLQMQSLGLQPSSHTYDGFIRAIVSDRGLRNGMEVLKIMQQNNLKPQDSTIATL-SV 371
+M LG+ + H Y+ + A ++L M++ + P T TL SV
Sbjct: 188 WKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISV 247
Query: 372 ECSKALELDLAEALLDQISR---CTNPKPFSAFLAACDTMDKPERAIKIFAKMRQKLRPD 428
C K++ + A ++ D++ R N +++F+ + A ++F +++ + +
Sbjct: 248 YCKKSMHFE-ALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDDVTAN 306
Query: 429 IRTYELLFSLFGNVNAPYEEGNMFSQVDSAKRINAIEMDMARNNIQHSHISMKNLLKALG 488
TY L + +N +D A R+ + M ++ ++L+ L
Sbjct: 307 HVTYTTLIDGYCRMN----------DIDEALRLREV---MESRGFSPGVVTYNSILRKLC 353
Query: 489 AEGMIRE---LIQYFCDSKTPLGTPTYNTVLHSLVEAQESHRAMEIFKQMKTCGIPPNAA 545
+G IRE L+ K T NT++++ + ++ A+++ K+M G+ +
Sbjct: 354 EDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMY 413
Query: 546 TYNIMI-DCCSIIRCFKSASALVSMMVRDGFYPQTMTYTALIKILLDYGDFDEALNLLDL 604
+Y +I C ++ + L SM + GF P TY+ L+ + DE LL+
Sbjct: 414 SYKALIHGFCKVLELENAKEELFSM-IEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEE 472
Query: 605 VSLEGIPHDVLLYNTILKKACEKGRIDVIEFIIEQMHQNKVQPDPSTCHFVFSGYVNCGF 664
G+ DV LY ++++ C+ ++D + + E M + + D + Y G
Sbjct: 473 FEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGK 532
Query: 665 HNSAMEALQVLSMRML 680
A V+ R L
Sbjct: 533 VTEASALFDVMYNRRL 548
Score = 37.0 bits (84), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 55/121 (45%), Gaps = 8/121 (6%)
Query: 85 LGADDFFHILNY----CARSPDPLFVMETWRMMEEKEIGLNNKCYLLMMQALCKGGYLEE 140
LG H+ N C++S DP + MEEK + + Y ++ CK E
Sbjct: 197 LGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFE 256
Query: 141 ASNLIYFLGERYGIYPILPVYNSFLGACAKLHSMVHAN-LCLDLMDSRMVGKNEVTYTEL 199
A ++ + ER G+ P + YNSF+ ++ M A L ++ D V N VTYT L
Sbjct: 257 ALSVQDRM-ERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDD--VTANHVTYTTL 313
Query: 200 L 200
+
Sbjct: 314 I 314
>sp|Q5G1S8|PP241_ARATH Pentatricopeptide repeat-containing protein At3g18110,
chloroplastic OS=Arabidopsis thaliana GN=EMB1270 PE=2
SV=2
Length = 1440
Score = 80.5 bits (197), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 103/459 (22%), Positives = 178/459 (38%), Gaps = 83/459 (18%)
Query: 170 KLHSMVHANLCLDLMDSRMVGKNEVTYTELLKLAVWQKNLSAVHEIWEDYIKHYSLSIFS 229
K+ S+ D++D+R+V Y ++K S E W+ +
Sbjct: 133 KILSLKSNQFVADILDARLVQMTPTDYCFVVK--------SVGQESWQR----------A 174
Query: 230 LRKFVWSFTRLRDLKSAYETLQHMVALAMMGKLYINRTSEGRLRSSRLDIPIPLNALPVM 289
L F W +L+ + MVA A++G L GR L + I A P +
Sbjct: 175 LEVFEW-----LNLRHWHSPNARMVA-AILGVL-------GRWNQESLAVEIFTRAEPTV 221
Query: 290 KVLRWSFSDVIHACGRTQNSGLAEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRGLRNGM- 348
++ ++ R+ A++L+ M+ G P +++ I A + GL +
Sbjct: 222 GDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLA 281
Query: 349 -EVLKIMQQNNLKPQDSTIATLSVECSKALELDLAEALLDQISRCTNPKPFSAFLAACDT 407
E+L +++ + L+P T TL CS+ LD
Sbjct: 282 VELLDMVRNSGLRPDAITYNTLLSACSRDSNLD--------------------------- 314
Query: 408 MDKPERAIKIFAKMR-QKLRPDIRTYELLFSLFGNVNAPYEEGNMFSQVDSAKRINAIEM 466
A+K+F M + +PD+ TY + S++G E +F M
Sbjct: 315 -----GAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLF-------------M 356
Query: 467 DMARNNIQHSHISMKNLLKALGAE---GMIRELIQYFCDSKTPLGTPTYNTVLHSLVEAQ 523
++ ++ +LL A E ++E+ Q TYNT++H +
Sbjct: 357 ELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQG 416
Query: 524 ESHRAMEIFKQMKT-CGIPPNAATYNIMIDCCSIIRCFKSASALVSMMVRDGFYPQTMTY 582
+ A++++K MK G P+A TY ++ID A+AL+S M+ G P TY
Sbjct: 417 QLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTY 476
Query: 583 TALIKILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTIL 621
+ALI G +EA + + G D L Y+ +L
Sbjct: 477 SALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVML 515
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/328 (21%), Positives = 135/328 (41%), Gaps = 41/328 (12%)
Query: 294 WSFSDVIHACGRTQNSGLAEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRGLRNGMEVLKI 353
W+++ +I GR + AE+L ++++ G P + TY+ + A +R EV +
Sbjct: 333 WTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQ 392
Query: 354 MQQNNLKPQDSTIATLSVECSKALELDLAEALLDQISRCTNPKPFS-AFLAACDTMDKPE 412
MQ+ + T T+ K +LDLA L + + P + + D++ K
Sbjct: 393 MQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKAN 452
Query: 413 RAIKIFAKMRQKL----RPDIRTYELLFSLFGNVNAPYEEGNMFSQVDSAKRINAIEMDM 468
R ++ A M + L +P ++TY L + E + FS M
Sbjct: 453 RTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSC-------------M 499
Query: 469 ARNNIQHSHISMKNLLKAL-------GAEGMIRELIQYFCDSKTPLGTPTYNTVLHSLVE 521
R+ + +++ +L L A G+ R++I D TP T Y ++ L++
Sbjct: 500 LRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMIS---DGHTPSYT-LYELMILGLMK 555
Query: 522 AQESHRAMEIFKQMKT-CGIPPNAATYNIMIDCCSII---RCFKSASALVSMMVRDGFYP 577
S + + M+ CG+ P ++ S++ CF A+ + + + +G+
Sbjct: 556 ENRSDDIQKTIRDMEELCGMNP--------LEISSVLVKGECFDLAARQLKVAITNGYEL 607
Query: 578 QTMTYTALIKILLDYGDFDEALNLLDLV 605
+ T +++ G EA LL+ +
Sbjct: 608 ENDTLLSILGSYSSSGRHSEAFELLEFL 635
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 114/278 (41%), Gaps = 20/278 (7%)
Query: 398 FSAFLAACDTMDKPERAIKIFAKMRQK-LRPDIRTYELLFSLFGNVNAPYEEGNMFSQVD 456
++A + K +A ++ MRQ+ PD+ ++ L +NA + G + +
Sbjct: 228 YNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTL------INARLKSGGLTPNL- 280
Query: 457 SAKRINAIEM-DMARNN-IQHSHISMKNLLKALGAEGMIRELIQYFCDSKTPLGTP---T 511
A+E+ DM RN+ ++ I+ LL A + + ++ F D + P T
Sbjct: 281 ------AVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWT 334
Query: 512 YNTVLHSLVEAQESHRAMEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASALVSMMV 571
YN ++ + A +F +++ G P+A TYN ++ + R + + M
Sbjct: 335 YNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQ 394
Query: 572 RDGFYPQTMTYTALIKILLDYGDFDEALNLL-DLVSLEGIPHDVLLYNTILKKACEKGRI 630
+ GF MTY +I + G D AL L D+ L G D + Y ++ + R
Sbjct: 395 KMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRT 454
Query: 631 DVIEFIIEQMHQNKVQPDPSTCHFVFSGYVNCGFHNSA 668
++ +M ++P T + GY G A
Sbjct: 455 VEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEA 492
Score = 60.8 bits (146), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 66/156 (42%), Gaps = 3/156 (1%)
Query: 515 VLHSLVEAQESHRAMEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASALVSMMVRDG 574
+L L + A+EIF + + + YN M+ S F A LV M + G
Sbjct: 197 ILGVLGRWNQESLAVEIFTRAEPT-VGDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRG 255
Query: 575 FYPQTMTYTALIKILLDYGDFDE--ALNLLDLVSLEGIPHDVLLYNTILKKACEKGRIDV 632
P +++ LI L G A+ LLD+V G+ D + YNT+L +D
Sbjct: 256 CVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDG 315
Query: 633 IEFIIEQMHQNKVQPDPSTCHFVFSGYVNCGFHNSA 668
+ E M ++ QPD T + + S Y CG A
Sbjct: 316 AVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEA 351
Score = 57.0 bits (136), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 79/165 (47%), Gaps = 3/165 (1%)
Query: 512 YNTVLHSLVEAQESHRAMEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASALVSMMV 571
+N++L ++ + +++++++K G+ P+ TYN +I R + L+ M
Sbjct: 930 WNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMR 989
Query: 572 RDGFYPQTMTYTALIKILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILKKACEKGRID 631
G P+ TY +LI ++A L + + +G+ D Y+T++K + + G
Sbjct: 990 NLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDS 1049
Query: 632 VIEFIIEQMHQNKVQPDPSTCHFVFSGYVNCGFHNSAMEALQVLS 676
E +++ M ++P +T H + Y + G + EA +VLS
Sbjct: 1050 KAEKLLQMMKNAGIEPTLATMHLLMVSYSSSG---NPQEAEKVLS 1091
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 132/710 (18%), Positives = 243/710 (34%), Gaps = 141/710 (19%)
Query: 76 LNLGHAHHSLGADDFFHILNYCARSPDPLFVMETWRMMEEKEIGLNNKCYLLMMQALCKG 135
LNL H HS A IL R +E + E +G + Y MM +
Sbjct: 181 LNLRH-WHSPNARMVAAILGVLGRWNQESLAVEIF-TRAEPTVGDRVQVYNAMMGVYSRS 238
Query: 136 GYLEEASNLIYFLGERYGIYPILPVYNSFLGACAKLHSMVHANLCLDLMD-SRMVG--KN 192
G +A L+ + +R G P L +N+ + A K + NL ++L+D R G +
Sbjct: 239 GKFSKAQELVDAMRQR-GCVPDLISFNTLINARLKSGGLT-PNLAVELLDMVRNSGLRPD 296
Query: 193 EVTYTELLKLAVWQKNLSAVHEIWEDYIKHYS----------LSIFS------------- 229
+TY LL NL +++ED H +S++
Sbjct: 297 AITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFM 356
Query: 230 ---LRKF----------VWSFTRLRDLKSAYETLQHMVALAMMGKLYINRTSEGRLRSSR 276
L+ F +++F R R+ + E Q M + GK + + + +
Sbjct: 357 ELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMG-FGKDEMTYNTIIHMYGKQ 415
Query: 277 LDIPIPLNALPVMKVLRW------SFSDVIHACGRTQNSGLAEQLMLQMQSLGLQPSSHT 330
+ + L MK L +++ +I + G+ + A LM +M +G++P+ T
Sbjct: 416 GQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQT 475
Query: 331 YDGFIRAIVSDRGLRNGMEVLKIMQQNNLKPQDSTIATL------SVECSKALEL----- 379
Y I + M ++ KP + + + E KA L
Sbjct: 476 YSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMI 535
Query: 380 -------------------------DLAEALLDQISRCT-NPKPFSAFLAACDTMDKPER 413
D+ + + D C NP S+ L + D R
Sbjct: 536 SDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEELCGMNPLEISSVLVKGECFDLAAR 595
Query: 414 AIKIFAKMRQKLRPDIRTYELLFSLFGNVNAPYEEGNMFSQVDSAKRINAIEMDMARNNI 473
+K+ +L D L S+ G+ ++ F ++ K + + +
Sbjct: 596 QLKVAITNGYELENDT-----LLSILGSYSSSGRHSEAFELLEFLKEHASGSKRLITEAL 650
Query: 474 QHSHISMKNLLKALGAEGMIRELIQYFCDSKTP---LGTPT-YNTVLHSLVEAQESHRAM 529
H + NL AL +YF D G+ T Y T+LH V + A
Sbjct: 651 IVLHCKVNNLSAALD---------EYFADPCVHGWCFGSSTMYETLLHCCVANEHYAEAS 701
Query: 530 EIFKQMK---------TC----------GIPPNA-----------------ATYNIMIDC 553
++F ++ C G P A Y +I+
Sbjct: 702 QVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQAETKGFHFACSPMYTDIIEA 761
Query: 554 CSIIRCFKSASALVSMMVRDGFYPQTMTYTALIKILLDYGDFDEALNLLDLVSLEGIPHD 613
+ ++ A ++V + + G P T+ +L+ G ++ A + + + +G
Sbjct: 762 YGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPT 821
Query: 614 VLLYNTILKKACEKGRIDVIEFIIEQMHQNKVQPDPSTCHFVFSGYVNCG 663
V N +L C GR++ + ++E++ + S+ + + G
Sbjct: 822 VESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAG 871
Score = 53.5 bits (127), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/265 (19%), Positives = 109/265 (41%), Gaps = 19/265 (7%)
Query: 412 ERAIKIFA--KMRQKLRPDIRTYELLFSLFGNVNAPYEEGNMFSQVDS--AKRINAIEMD 467
+RA+++F +R P+ R + + G N +F++ + R+
Sbjct: 172 QRALEVFEWLNLRHWHSPNARMVAAILGVLGRWNQESLAVEIFTRAEPTVGDRVQVYNAM 231
Query: 468 MARNNIQHSHISMKNLLKALGAEGMIRELIQYFCDSKTPLGTPTYNTVLHSLVEAQ--ES 525
M + + L+ A+ G + +LI ++NT++++ +++
Sbjct: 232 MGVYSRSGKFSKAQELVDAMRQRGCVPDLI-------------SFNTLINARLKSGGLTP 278
Query: 526 HRAMEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASALVSMMVRDGFYPQTMTYTAL 585
+ A+E+ ++ G+ P+A TYN ++ CS A + M P TY A+
Sbjct: 279 NLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAM 338
Query: 586 IKILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILKKACEKGRIDVIEFIIEQMHQNKV 645
I + G EA L + L+G D + YN++L + + ++ + +QM +
Sbjct: 339 ISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGF 398
Query: 646 QPDPSTCHFVFSGYVNCGFHNSAME 670
D T + + Y G + A++
Sbjct: 399 GKDEMTYNTIIHMYGKQGQLDLALQ 423
Score = 53.5 bits (127), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 76/389 (19%), Positives = 147/389 (37%), Gaps = 30/389 (7%)
Query: 296 FSDVIHACGRTQNSGLAEQLMLQMQSLGLQPSSHTYDGFIRAIVSDRGLRNGMEVLKIMQ 355
++D+I A G+ + AE ++ ++ G P T++ + A + M
Sbjct: 755 YTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMM 814
Query: 356 QNNLKPQDSTIATLSVECSKALELD--------LAEALLD---QISRCTNPKPFSAFLAA 404
++ P +I L AL +D + E L D +IS+ + AF A
Sbjct: 815 RDGPSPTVESINILL----HALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARA 870
Query: 405 CDTMDKPERAIKIFAKMRQK-LRPDIRTYELLFSLFGNVNAPYEEGNMFSQVDSAKRINA 463
+ + KI++ M+ P IR Y ++ L + M S+++ A
Sbjct: 871 GNIFE----VKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEAN---- 922
Query: 464 IEMDMARNNIQHSHISMKNLLKALGAEGMIRELIQYFCDSKTPLGTPTYNTVLHSLVEAQ 523
++++A N SM + A+ ++ Q ++ TYNT++ +
Sbjct: 923 FKVELAIWN------SMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDR 976
Query: 524 ESHRAMEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASALVSMMVRDGFYPQTMTYT 583
+ +QM+ G+ P TY +I +C + A L ++ G Y
Sbjct: 977 RPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYH 1036
Query: 584 ALIKILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILKKACEKGRIDVIEFIIEQMHQN 643
++KI D G +A LL ++ GI + + ++ G E ++ +
Sbjct: 1037 TMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDT 1096
Query: 644 KVQPDPSTCHFVFSGYVNCGFHNSAMEAL 672
+V+ V Y+ +NS +E L
Sbjct: 1097 EVELTTLPYSSVIDAYLRSKDYNSGIERL 1125
Score = 53.1 bits (126), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 60/290 (20%), Positives = 119/290 (41%), Gaps = 24/290 (8%)
Query: 394 NPKPFSAFLAACDTMDKPERAIKIFAKMRQKLRPDIRTYELLFSLFGNVNAPYEEGNMFS 453
N + +A L ++ A++IF + + ++ Y + + Y FS
Sbjct: 190 NARMVAAILGVLGRWNQESLAVEIFTRAEPTVGDRVQVYNAMMGV-------YSRSGKFS 242
Query: 454 Q----VDSAKRINAIEMDMARNNIQHSHISMKNLLKALGAEGMIRELIQYFCDSKTPLGT 509
+ VD+ ++ + ++ N + ++ + L L E L+ +S
Sbjct: 243 KAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVE-----LLDMVRNSGLRPDA 297
Query: 510 PTYNTVLHSLVEAQESHRAMEIFKQMKTCGIPPNAATYNIMIDCCSIIRCFKSASA--LV 567
TYNT+L + A+++F+ M+ P+ TYN MI RC +A A L
Sbjct: 298 ITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYG--RCGLAAEAERLF 355
Query: 568 SMMVRDGFYPQTMTYTALIKILLDYGDFDEALNLLDLVSLEGIPHDVLLYNTILKKACEK 627
+ GF+P +TY +L+ + ++ + + G D + YNTI+ ++
Sbjct: 356 MELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQ 415
Query: 628 GRIDVIEFIIEQMHQ-NKVQPDPSTCHFVFSGYVNCGFHNSAMEALQVLS 676
G++D+ + + M + PD T + + G N +EA ++S
Sbjct: 416 GQLDLALQLYKDMKGLSGRNPDAITYTVLID---SLGKANRTVEAAALMS 462
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.135 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 264,552,936
Number of Sequences: 539616
Number of extensions: 10652762
Number of successful extensions: 30085
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 295
Number of HSP's successfully gapped in prelim test: 136
Number of HSP's that attempted gapping in prelim test: 24800
Number of HSP's gapped (non-prelim): 2854
length of query: 764
length of database: 191,569,459
effective HSP length: 125
effective length of query: 639
effective length of database: 124,117,459
effective search space: 79311056301
effective search space used: 79311056301
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 65 (29.6 bits)