Your job contains 1 sequence.
>004271
MGVVDMSNNPPTSRTKDFFASPALSLSLAGIFRGAGASAAANNEVEEGYEGSGGAGGGSK
REETTVEISSENSGHTRSRSDADFDGGGDGDDDDGDGDGDDDSKNKKKKRKKYHRHTAEQ
IREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENSLLKSEI
EKLREENKAMREAINKACCPNCGMATTSRDTSMTTEEQQLRIENARLKAEVEKLRAAVGK
CPPGATSTSSCSAGNDQENRSSLDFYTGIFGIDKSRIMELVNQGMEELKKMATAGGPLWI
RSLETGREILNYDEYVKEFSAENSSNGKSNRSIEASRDAGVVFVDLPKLVQSFTDVNQWK
AMFPCLISKAATVDVICGGEGPNRNGAVQLMFAELQMLTPMVPTREVYFVRYCKQLSAEQ
WAIVDVSIDKVEENIDASLAKCRKRPSGCIVEDKSNGHCKVTWVEHLECQKGTVHTMYRS
IVSSGLAFGARHWMTTLQLQCERLVFFMATNVPTKDSSGVATLAGRKSILKLAQRMTWSF
CRAIGASSYHVWNKVTSKTGEDIRVSSRKNLNDPGEPLGVILCAVSSVWLPVSPNVLFDF
LRDEAHRNEWDIMSNGGPVQTIANLAKGQDRGNAVNIQTMKSKENSMWLLQDSYTNAYES
MVVYAPVDITGMQSVITGCDSSNIAILPSGFSILPDGLESRPLVITSRQEEKITEGGSLL
SIAFQILTNNSPAAKLTMESVDSVNTLISCTLRNIKTSLQCEDA
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 004271
(764 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2119048 - symbol:ATML1 "AT4G21750" species:370... 1058 1.8e-160 3
TAIR|locus:2098866 - symbol:HDG1 "AT3G61150" species:3702... 1175 8.8e-158 2
TAIR|locus:2127008 - symbol:ANL2 "ANTHOCYANINLESS 2" spec... 1505 4.8e-157 2
TAIR|locus:2207235 - symbol:HDG2 "AT1G05230" species:3702... 1463 6.9e-150 1
TAIR|locus:2135368 - symbol:PDF2 "AT4G04890" species:3702... 1450 1.6e-148 1
TAIR|locus:2206880 - symbol:HDG11 "AT1G73360" species:370... 896 5.4e-130 2
TAIR|locus:2030913 - symbol:HDG12 "homeodomain GLABROUS 1... 882 1.0e-124 2
TAIR|locus:2062540 - symbol:HDG3 "AT2G32370" species:3702... 1194 2.2e-121 1
TAIR|locus:2167230 - symbol:HDG9 "AT5G17320" species:3702... 697 4.1e-100 2
TAIR|locus:2097770 - symbol:HDG8 "AT3G03260" species:3702... 988 1.5e-99 1
TAIR|locus:2131814 - symbol:FWA "AT4G25530" species:3702 ... 966 3.2e-97 1
TAIR|locus:2023932 - symbol:HDG10 "AT1G34650" species:370... 715 1.8e-95 2
TAIR|locus:2145116 - symbol:HDG7 "AT5G52170" species:3702... 901 2.5e-90 1
TAIR|locus:2129396 - symbol:HDG4 "AT4G17710" species:3702... 742 1.7e-73 1
TAIR|locus:2182850 - symbol:AT5G07260 "AT5G07260" species... 290 4.5e-26 2
TAIR|locus:2116442 - symbol:AT4G26920 "AT4G26920" species... 167 3.5e-18 3
TAIR|locus:2175856 - symbol:REV "AT5G60690" species:3702 ... 155 1.0e-17 3
TAIR|locus:2134088 - symbol:HB-8 "AT4G32880" species:3702... 145 3.1e-16 3
TAIR|locus:2028140 - symbol:PHV "AT1G30490" species:3702 ... 146 4.1e-16 3
TAIR|locus:2034086 - symbol:ATHB-15 "AT1G52150" species:3... 140 1.5e-14 3
TAIR|locus:2061544 - symbol:PHB "AT2G34710" species:3702 ... 137 2.1e-14 3
UNIPROTKB|H0YJ32 - symbol:SHOX2 "Short stature homeobox p... 135 5.8e-08 1
TAIR|locus:2205075 - symbol:ATHB13 species:3702 "Arabidop... 152 7.7e-08 1
TAIR|locus:2049614 - symbol:HB17 "homeobox-leucine zipper... 147 2.3e-07 1
TAIR|locus:2202795 - symbol:AtHB23 "homeobox protein 23" ... 144 3.7e-07 1
UNIPROTKB|A6NLG4 - symbol:SHOX2 "cDNA FLJ38019 fis, clone... 135 4.1e-07 1
TAIR|locus:2084228 - symbol:HB-1 "homeobox 1" species:370... 140 6.2e-07 2
TAIR|locus:2102107 - symbol:HB20 "homeobox protein 20" sp... 140 8.3e-07 2
TAIR|locus:2129061 - symbol:HAT1 species:3702 "Arabidopsi... 142 9.3e-07 1
TAIR|locus:2129136 - symbol:HB-2 "homeobox protein 2" spe... 142 9.5e-07 1
TAIR|locus:2079542 - symbol:HB-12 "homeobox 12" species:3... 139 1.0e-06 1
TAIR|locus:2040520 - symbol:HB22 "homeobox protein 22" sp... 131 1.1e-06 1
RGD|3116 - symbol:Msx2 "msh homeobox 2" species:10116 "Ra... 108 1.1e-06 2
UNIPROTKB|P52953 - symbol:Msx2 "Homeobox protein MSX-2" s... 108 1.1e-06 2
TAIR|locus:2154724 - symbol:HB52 "homeobox protein 52" sp... 123 1.1e-06 1
TAIR|locus:2150901 - symbol:HB-3 "homeobox 3" species:370... 142 1.3e-06 1
TAIR|locus:2062754 - symbol:HB-7 "homeobox 7" species:370... 139 1.5e-06 1
TAIR|locus:2059143 - symbol:HAT9 species:3702 "Arabidopsi... 139 1.9e-06 1
RGD|3674 - symbol:Shox2 "short stature homeobox 2" specie... 135 3.2e-06 1
UNIPROTKB|O35750 - symbol:Shox2 "Short stature homeobox p... 135 3.2e-06 1
TAIR|locus:2170194 - symbol:HAT14 "homeobox from Arabidop... 139 3.2e-06 1
UNIPROTKB|G3X7M1 - symbol:SHOX "Uncharacterized protein" ... 138 3.3e-06 1
TAIR|locus:2171489 - symbol:HAT2 species:3702 "Arabidopsi... 137 3.5e-06 1
TAIR|locus:2103396 - symbol:HAT3 "homeobox-leucine zipper... 138 3.5e-06 1
TAIR|locus:2137599 - symbol:HAT22 species:3702 "Arabidops... 135 5.6e-06 1
UNIPROTKB|H0YLI9 - symbol:SHOX "Short stature homeobox pr... 132 5.6e-06 1
UNIPROTKB|F1NF72 - symbol:F1NF72 "Uncharacterized protein... 116 6.3e-06 1
ZFIN|ZDB-GENE-040426-1457 - symbol:shox2 "short stature h... 135 6.8e-06 1
UNIPROTKB|F6Y4K5 - symbol:SHOX2 "Uncharacterized protein"... 135 7.9e-06 1
UNIPROTKB|I3L828 - symbol:SHOX2 "Uncharacterized protein"... 135 8.1e-06 1
WB|WBGene00000430 - symbol:ceh-5 species:6239 "Caenorhabd... 115 8.1e-06 1
FB|FBgn0085396 - symbol:CG34367 species:7227 "Drosophila ... 137 8.3e-06 1
FB|FBgn0025334 - symbol:PHDP "Putative homeodomain protei... 130 8.6e-06 1
UNIPROTKB|E1BLB9 - symbol:E1BLB9 "Uncharacterized protein... 135 8.7e-06 1
UNIPROTKB|O60902 - symbol:SHOX2 "Short stature homeobox p... 135 8.7e-06 1
MGI|MGI:1201673 - symbol:Shox2 "short stature homeobox 2"... 135 8.7e-06 1
UNIPROTKB|E2QZN5 - symbol:SHOX2 "Uncharacterized protein"... 135 8.8e-06 1
TAIR|locus:2055028 - symbol:HB4 "homeobox-leucine zipper ... 133 8.9e-06 2
RGD|1586211 - symbol:Hoxb8 "homeo box B8" species:10116 "... 114 1.0e-05 1
UNIPROTKB|F1S681 - symbol:LHX4 "Uncharacterized protein" ... 135 1.1e-05 1
TAIR|locus:2144578 - symbol:HB51 "homeobox 51" species:37... 130 1.2e-05 1
UNIPROTKB|G3V2N9 - symbol:NOBOX "Homeobox protein NOBOX" ... 119 1.2e-05 1
UNIPROTKB|Q969G2 - symbol:LHX4 "LIM/homeobox protein Lhx4... 135 1.2e-05 1
UNIPROTKB|H0YMR3 - symbol:SHOX "Short stature homeobox pr... 132 1.2e-05 1
UNIPROTKB|F1P4U7 - symbol:HOXD11 "Homeobox protein Hox-D1... 113 1.3e-05 1
RGD|1595784 - symbol:Hoxc9 "homeobox C9" species:10116 "R... 113 1.3e-05 1
UNIPROTKB|P18866 - symbol:Hoxc8 "Homeobox protein Hox-C8"... 113 1.3e-05 1
WB|WBGene00000434 - symbol:ceh-9 species:6239 "Caenorhabd... 113 1.3e-05 1
UNIPROTKB|F1Q361 - symbol:SHOX "Uncharacterized protein" ... 132 1.4e-05 1
UNIPROTKB|O15266 - symbol:SHOX "Short stature homeobox pr... 132 1.4e-05 1
UNIPROTKB|K7GS77 - symbol:LOC100520816 "Uncharacterized p... 132 1.4e-05 1
UNIPROTKB|F1SG33 - symbol:LOC100520816 "Uncharacterized p... 132 1.5e-05 1
ZFIN|ZDB-GENE-051030-21 - symbol:shox "short stature home... 132 1.5e-05 1
UNIPROTKB|I3L383 - symbol:HOXB8 "Homeobox protein Hox-B8"... 112 1.7e-05 1
RGD|2320224 - symbol:LOC100364841 "rCG53272-like" species... 112 1.7e-05 1
UNIPROTKB|F1MFM7 - symbol:LHX4 "Uncharacterized protein" ... 133 2.0e-05 1
MGI|MGI:101776 - symbol:Lhx4 "LIM homeobox protein 4" spe... 133 2.0e-05 1
UNIPROTKB|F1PCI5 - symbol:LHX4 "Uncharacterized protein" ... 133 2.0e-05 1
UNIPROTKB|F1NPY3 - symbol:F1NPY3 "Uncharacterized protein... 124 3.1e-05 1
TAIR|locus:2168225 - symbol:HB5 "homeobox protein 5" spec... 129 3.5e-05 1
UNIPROTKB|F1NYF2 - symbol:NKX6-2 "Uncharacterized protein... 109 3.5e-05 1
UNIPROTKB|H9L2C7 - symbol:LHX4 "Uncharacterized protein" ... 126 3.5e-05 1
TAIR|locus:2140055 - symbol:HB16 "homeobox protein 16" sp... 128 3.9e-05 1
ZFIN|ZDB-GENE-980526-216 - symbol:eng1a "engrailed 1a" sp... 125 4.2e-05 1
UNIPROTKB|A8MWF9 - symbol:MEOX1 "Homeobox protein MOX-1" ... 108 4.5e-05 1
WB|WBGene00000439 - symbol:ceh-16 species:6239 "Caenorhab... 120 5.7e-05 1
TAIR|locus:2041283 - symbol:HB6 "homeobox protein 6" spec... 127 5.8e-05 1
RGD|1586239 - symbol:LOC691272 "similar to reproductive h... 107 5.8e-05 1
UNIPROTKB|F1NFE6 - symbol:SHOX "Uncharacterized protein" ... 123 6.1e-05 1
UNIPROTKB|F1NVB2 - symbol:TLX3 "T-cell leukemia homeobox ... 106 7.4e-05 1
ZFIN|ZDB-GENE-990415-108 - symbol:hoxb8a "homeo box B8a" ... 123 8.9e-05 1
ZFIN|ZDB-GENE-980526-299 - symbol:hhex "hematopoietically... 122 8.9e-05 1
ZFIN|ZDB-GENE-060728-1 - symbol:lhx4 "LIM homeobox 4" spe... 127 9.1e-05 1
UNIPROTKB|D6RBG8 - symbol:PITX2 "Pituitary homeobox 2" sp... 105 9.5e-05 1
MGI|MGI:108011 - symbol:Nobox "NOBOX oogenesis homeobox" ... 128 0.00012 1
UNIPROTKB|F1P4U9 - symbol:HOXD8 "Homeobox protein Hox-D8"... 107 0.00012 1
MGI|MGI:1096343 - symbol:Lhx8 "LIM homeobox protein 8" sp... 125 0.00014 1
UNIPROTKB|G3V6V6 - symbol:Lhx8 "RCG29002" species:10116 "... 125 0.00014 1
ZFIN|ZDB-GENE-980526-167 - symbol:eng2a "engrailed 2a" sp... 122 0.00014 1
UNIPROTKB|E1C1I8 - symbol:LOC100858967 "Uncharacterized p... 118 0.00017 1
WARNING: Descriptions of 107 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2119048 [details] [associations]
symbol:ATML1 "AT4G21750" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;IDA] [GO:0009913 "epidermal cell differentiation"
evidence=IGI] [GO:0048825 "cotyledon development" evidence=IGI]
[GO:0006473 "protein acetylation" evidence=RCA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=RCA] [GO:0010027
"thylakoid membrane organization" evidence=RCA] [GO:0010075
"regulation of meristem growth" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0016226 "iron-sulfur cluster assembly"
evidence=RCA] [GO:0048481 "ovule development" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:3.30.530.20
InterPro:IPR023393 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
HOGENOM:HOG000243256 EMBL:AL161555 HSSP:Q6B2C0 EMBL:U37589
EMBL:AL035527 EMBL:AY091104 EMBL:AY150491 EMBL:AK229970
IPI:IPI00535360 PIR:T05850 RefSeq:NP_001031692.1 RefSeq:NP_193906.2
UniGene:At.2706 ProteinModelPortal:Q8RWU4 SMR:Q8RWU4 STRING:Q8RWU4
PRIDE:Q8RWU4 EnsemblPlants:AT4G21750.1 EnsemblPlants:AT4G21750.2
GeneID:828263 KEGG:ath:AT4G21750 TAIR:At4g21750 eggNOG:NOG261733
InParanoid:Q8RWU4 OMA:HAWTTLS PhylomeDB:Q8RWU4
ProtClustDB:CLSN2681990 Genevestigator:Q8RWU4 GO:GO:0048825
GO:GO:0009913 Uniprot:Q8RWU4
Length = 762
Score = 1058 (377.5 bits), Expect = 1.8e-160, Sum P(3) = 1.8e-160
Identities = 205/428 (47%), Positives = 295/428 (68%)
Query: 273 DKSRIMELVNQGMEELKKMATAGGPLWIRSLETGREILNYDEYVKEFSAENSSNGKSNRS 332
DK I+EL MEEL +MA G PLW+ S + EILN +EY + F RS
Sbjct: 256 DKPMIVELAVAAMEELVRMAQTGDPLWVSS-DNSVEILNEEEYFRTFPRGIGPKPIGLRS 314
Query: 333 IEASRDAGVVFVDLPKLVQSFTDVNQWKAMFPCLISKAATVDVICGGEGPNRNGAVQLMF 392
EASR++ VV ++ L++ DVNQW ++F ++S+A T++V+ G N NGA+Q+M
Sbjct: 315 -EASRESTVVIMNHINLIEILMDVNQWSSVFCGIVSRALTLEVLSTGVAGNYNGALQVMT 373
Query: 393 AELQMLTPMVPTREVYFVRYCKQLSAEQWAIVDVSIDKVEENIDASLAKCRKRPSGCIVE 452
AE Q+ +P+VPTRE YFVRYCKQ S WA+VDVS+D + + + + R+RPSGC+++
Sbjct: 374 AEFQVPSPLVPTRENYFVRYCKQHSDGIWAVVDVSLDSLRPS---PITRSRRRPSGCLIQ 430
Query: 453 DKSNGHCKVTWVEHLECQKGTVHTMYRSIVSSGLAFGARHWMTTLQLQCERLVFFMATNV 512
+ NG+ KVTWVEH+E +VH MY+ +V++GLAFGA+ W+ TL QCERL MA+N+
Sbjct: 431 ELQNGYSKVTWVEHIEVDDRSVHNMYKPLVNTGLAFGAKRWVATLDRQCERLASSMASNI 490
Query: 513 PTKDSSGVATLAGRKSILKLAQRMTWSFCRAIGASSYHVWNKVTSKTGEDIRVSSRKNLN 572
P D S + + GRKS+LKLA+RM SFC +GAS+ H W +++ +D+RV +RK+++
Sbjct: 491 PACDLSVITSPEGRKSMLKLAERMVMSFCTGVGASTAHAWTTLSTTGSDDVRVMTRKSMD 550
Query: 573 DPGEPLGVILCAVSSVWLPVSPNVLFDFLRDEAHRNEWDIMSNGGPVQTIANLAKGQDRG 632
DPG P G++L A +S W+PV+P +FDFLRDE R+EWDI+SNGG VQ +A++A G+D G
Sbjct: 551 DPGRPPGIVLSAATSFWIPVAPKRVFDFLRDENSRSEWDILSNGGLVQEMAHIANGRDPG 610
Query: 633 NAVN---IQTMKSKENSMWLLQDSYTNAYESMVVYAPVDITGMQSVITGCDSSNIAILPS 689
N+V+ + + S +++M +LQ+S T+A S V+YAPVDI M V++G D +A+LPS
Sbjct: 611 NSVSLLRVNSGNSGQSNMLILQESCTDASGSYVIYAPVDIIAMNVVLSGGDPDYVALLPS 670
Query: 690 GFSILPDG 697
GF+ILPDG
Sbjct: 671 GFAILPDG 678
Score = 402 (146.6 bits), Expect = 1.8e-160, Sum P(3) = 1.8e-160
Identities = 85/165 (51%), Positives = 113/165 (68%)
Query: 113 YHRHTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHE 172
YHRHT QI+E+E+ FKE PHPD+KQR++LS++L L P QVKFWFQN+RTQ+K ERHE
Sbjct: 66 YHRHTQRQIQELESFFKECPHPDDKQRKELSRELSLEPLQVKFWFQNKRTQMKAQHERHE 125
Query: 173 NSLLKSEIEKLREENKAMREAINKACCPNCGMATTSRDTSMTTEEQQLRIENARLKAEVE 232
N +LKSE +KLR EN ++A++ A CPNCG + M+ +EQ LRIENARL+ E++
Sbjct: 126 NQILKSENDKLRAENNRYKDALSNATCPNCGGPAAIGE--MSFDEQHLRIENARLREEID 183
Query: 233 KLRAA----VGKCPPGATSTS--SCSAGNDQENRSSLDFYTGIFG 271
++ A VGK P A S+S S+ + +RS LD G FG
Sbjct: 184 RISAIAAKYVGK-PLMANSSSFPQLSSSHHIPSRS-LDLEVGNFG 226
Score = 140 (54.3 bits), Expect = 1.8e-160, Sum P(3) = 1.8e-160
Identities = 27/49 (55%), Positives = 38/49 (77%)
Query: 716 GGSLLSIAFQILTNNSPAAKLTMESVDSVNTLISCTLRNIKTSLQCEDA 764
GGSLL++AFQIL ++ P AKL++ SV +VN+LI CT+ IK +L C+ A
Sbjct: 714 GGSLLTVAFQILVDSVPTAKLSLGSVATVNSLIKCTVERIKAALACDGA 762
>TAIR|locus:2098866 [details] [associations]
symbol:HDG1 "AT3G61150" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006473 "protein acetylation" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AL137898 Pfam:PF01852
SMART:SM00234 PROSITE:PS50848 HOGENOM:HOG000243256
ProtClustDB:CLSN2685237 KO:K09338 EMBL:AJ224338 EMBL:AY050866
EMBL:AY096757 IPI:IPI00541112 PIR:T47907 RefSeq:NP_191674.1
UniGene:At.21209 HSSP:Q8C172 ProteinModelPortal:Q9M2E8 SMR:Q9M2E8
IntAct:Q9M2E8 PaxDb:Q9M2E8 PRIDE:Q9M2E8 EnsemblPlants:AT3G61150.1
GeneID:825287 KEGG:ath:AT3G61150 TAIR:At3g61150 eggNOG:NOG267226
InParanoid:Q9M2E8 OMA:HTEYDEN PhylomeDB:Q9M2E8
Genevestigator:Q9M2E8 Uniprot:Q9M2E8
Length = 808
Score = 1175 (418.7 bits), Expect = 8.8e-158, Sum P(2) = 8.8e-158
Identities = 232/499 (46%), Positives = 336/499 (67%)
Query: 274 KSRIMELVNQGMEELKKMATAGGPLWIRSLETGREILNYDEYVKEFSAENSSNGKSNRSI 333
+SR ++L M+EL KMA PLW+RS ++G E+LN +EY FS K + +
Sbjct: 314 RSRYLDLALAAMDELVKMAQTREPLWVRSSDSGFEVLNQEEYDTSFS--RCVGPKQDGFV 371
Query: 334 -EASRDAGVVFVDLPKLVQSFTDVNQWKAMFPCLISKAATVDVICGGEGPNRNGAVQLMF 392
EAS++AG V ++ LV++ D +W MFP ++S+ +T ++I G G RNGA+ LM
Sbjct: 372 SEASKEAGTVIINSLALVETLMDSERWAEMFPSMVSRTSTTEIISSGMG-GRNGALHLMH 430
Query: 393 AELQMLTPMVPTREVYFVRYCKQLSAEQWAIVDVSIDKVEENIDASLAKCRKRPSGCIVE 452
AELQ+L+P+VP R+V F+R+CKQ + WA+VDVSID + E +S CR+ PSGC+V+
Sbjct: 431 AELQLLSPLVPVRQVSFLRFCKQHAEGVWAVVDVSIDSIREGSSSS---CRRLPSGCLVQ 487
Query: 453 DKSNGHCKVTWVEHLECQKGTVHTMYRSIVSSGLAFGARHWMTTLQLQCERLVFFMATNV 512
D +NG+ KVTW+EH E + +H +YR ++ GLAFGA WM LQ QCE L M++ V
Sbjct: 488 DMANGYSKVTWIEHTEYDENHIHRLYRPLLRCGLAFGAHRWMAALQRQCECLTILMSSTV 547
Query: 513 PTKDSSGVATLAGRKSILKLAQRMTWSFCRAIGASSYHVWNKVT-SKTGEDIRVSSRKNL 571
T + GRKS+LKLA+RMT +FC + ASS W+K+ ED+R+ +RK++
Sbjct: 548 STSTNPSPINCNGRKSMLKLAKRMTDNFCGGVCASSLQKWSKLNVGNVDEDVRIMTRKSV 607
Query: 572 NDPGEPLGVILCAVSSVWLPVSPNVLFDFLRDEAHRNEWDIMSNGGPVQTIANLAKGQDR 631
N+PGEP G+IL A +SVW+PVSP LFDFL +E R+EWDI+SNGGP++ +A++AKG DR
Sbjct: 608 NNPGEPPGIILNAATSVWMPVSPRRLFDFLGNERLRSEWDILSNGGPMKEMAHIAKGHDR 667
Query: 632 GNAVNI---QTMKSKENSMWLLQDSYTNAYESMVVYAPVDITGMQSVITGCDSSNIAILP 688
N+V++ + + ++SM +LQ++ +A ++VVYAPVDI MQ+V+ G DS+ +A+LP
Sbjct: 668 SNSVSLLRASAINANQSSMLILQETSIDAAGAVVVYAPVDIPAMQAVMNGGDSAYVALLP 727
Query: 689 SGFSILPDGLESRPLVITSRQEEK-----ITEGGSLLSIAFQILTNNSPAAKLTMESVDS 743
SGF+ILP+G + + EGGSLL++AFQIL N+ P AKLT+ESV++
Sbjct: 728 SGFAILPNGQAGTQRCAAEERNSIGNGGCMEEGGSLLTVAFQILVNSLPTAKLTVESVET 787
Query: 744 VNTLISCTLRNIKTSLQCE 762
VN LISCT++ IK +L C+
Sbjct: 788 VNNLISCTVQKIKAALHCD 806
Score = 384 (140.2 bits), Expect = 8.8e-158, Sum P(2) = 8.8e-158
Identities = 75/128 (58%), Positives = 96/128 (75%)
Query: 113 YHRHTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHE 172
YHRHT +QI+++E++FKE HPDEKQR LS++L L PRQVKFWFQNRRTQ+KT ERHE
Sbjct: 114 YHRHTPKQIQDLESVFKECAHPDEKQRLDLSRRLNLDPRQVKFWFQNRRTQMKTQIERHE 173
Query: 173 NSLLKSEIEKLREENKAMREAINKACCPNCGMATTSRDTSMTTEEQQLRIENARLKAEVE 232
N+LL+ E +KLR EN ++REA+ C NCG + SM EEQ LRIEN+RLK E++
Sbjct: 174 NALLRQENDKLRAENMSVREAMRNPMCGNCGGPAVIGEISM--EEQHLRIENSRLKDELD 231
Query: 233 KLRAAVGK 240
++ A GK
Sbjct: 232 RVCALTGK 239
Score = 37 (18.1 bits), Expect = 4.0e-121, Sum P(2) = 4.0e-121
Identities = 18/64 (28%), Positives = 31/64 (48%)
Query: 252 SAGNDQENRSSLDFYTGIFGIDKSRIMELVNQGMEELKKMATAGGPLWIRSLETG-REIL 310
S G D E+RS D + G D ++ ++ +++ KK P I+ LE+ +E
Sbjct: 79 SRGEDVESRSESDNAEAVSGDD----LDTSDRPLKK-KKRYHRHTPKQIQDLESVFKECA 133
Query: 311 NYDE 314
+ DE
Sbjct: 134 HPDE 137
>TAIR|locus:2127008 [details] [associations]
symbol:ANL2 "ANTHOCYANINLESS 2" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0043481 "anthocyanin accumulation in tissues in
response to UV light" evidence=IMP] [GO:0048364 "root development"
evidence=IMP] [GO:0048765 "root hair cell differentiation"
evidence=IMP] [GO:0006473 "protein acetylation" evidence=RCA]
[GO:0042335 "cuticle development" evidence=IMP] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 INTERPRO:IPR002913 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 GO:GO:0043481 GO:GO:0042335 Gene3D:1.10.10.60
SUPFAM:SSF46689 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
EMBL:AF058919 EMBL:AL161472 EMBL:U85254 EMBL:AF077335 EMBL:AK226968
IPI:IPI00538459 PIR:T01237 RefSeq:NP_567183.2 UniGene:At.24442
ProteinModelPortal:Q0WV12 SMR:Q0WV12 STRING:Q0WV12 PaxDb:Q0WV12
PRIDE:Q0WV12 EnsemblPlants:AT4G00730.1 GeneID:828022
KEGG:ath:AT4G00730 TAIR:At4g00730 eggNOG:euNOG18333
HOGENOM:HOG000243256 InParanoid:Q0WV12 OMA:MAGTING PhylomeDB:Q0WV12
ProtClustDB:CLSN2685237 Genevestigator:Q0WV12 GO:GO:0048765
Uniprot:Q0WV12
Length = 802
Score = 1505 (534.8 bits), Expect = 4.8e-157, Sum P(2) = 4.8e-157
Identities = 319/680 (46%), Positives = 443/680 (65%)
Query: 113 YHRHTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHE 172
YHRHT +QI+E+E++FKE PHPDEKQR +LSK+L L RQVKFWFQNRRTQ+KT ERHE
Sbjct: 138 YHRHTPQQIQELESMFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHE 197
Query: 173 NSLLKSEIEKLREENKAMREAINKACCPNCGMATTSRDTSMTT-----EEQQLRIENARL 227
N+LL+ E +KLR EN ++REA+ C NCG D S+ E +L+ E R+
Sbjct: 198 NALLRQENDKLRAENMSIREAMRNPICTNCGGPAMLGDVSLEEHHLRIENARLKDELDRV 257
Query: 228 KAEVEK-------------LRAAVGK--------CPPGATSTSSCSAGNDQENRSSLDFY 266
K L AVG PP C Q++
Sbjct: 258 CNLTGKFLGHHHNHHYNSSLELAVGTNNNGGHFAFPPDFGGGGGCLPPQQQQS------- 310
Query: 267 TGIFGID-KSRIMELVNQGMEELKKMATAGGPLWIRSLETGREILNYDEYVKEFSAENSS 325
T I GID KS ++EL M+EL K+A + PLW++SL+ R+ LN DEY++ FS S
Sbjct: 311 TVINGIDQKSVLLELALTAMDELVKLAQSEEPLWVKSLDGERDELNQDEYMRTFS----S 366
Query: 326 NGKSNRSIEASRDAGVVFVDLPKLVQSFTDVNQWKAMFPCLISKAATVDVICGGEGPNRN 385
+ + EASR +G+V ++ LV++ D N+W MFPC +++A T DVI GG N
Sbjct: 367 TKPTGLATEASRTSGMVIINSLALVETLMDSNRWTEMFPCNVARATTTDVISGGMAGTIN 426
Query: 386 GAVQLMFAELQMLTPMVPTREVYFVRYCKQLSAEQWAIVDVSIDKVEENIDASLAKCRKR 445
GA+QLM AELQ+L+P+VP R V F+R+CKQ + WA+VDVSID V EN R+
Sbjct: 427 GALQLMNAELQVLSPLVPVRNVNFLRFCKQHAEGVWAVVDVSIDPVREN-SGGAPVIRRL 485
Query: 446 PSGCIVEDKSNGHCKVTWVEHLECQKGTVHTMYRSIVSSGLAFGARHWMTTLQLQCERLV 505
PSGC+V+D SNG+ KVTWVEH E + +H +YR ++ SGL FG++ W+ TLQ QCE L
Sbjct: 486 PSGCVVQDVSNGYSKVTWVEHAEYDENQIHQLYRPLLRSGLGFGSQRWLATLQRQCECLA 545
Query: 506 FFMATNVPTKDSSGVATLAGRKSILKLAQRMTWSFCRAIGASSYHVWNKVT-SKTGEDIR 564
++++V + D++ + T GRKS+LKLAQRMT++FC I A S H W+K+T D+R
Sbjct: 546 ILISSSVTSHDNTSI-TPGGRKSMLKLAQRMTFNFCSGISAPSVHNWSKLTVGNVDPDVR 604
Query: 565 VSSRKNLNDPGEPLGVILCAVSSVWLPVSPNVLFDFLRDEAHRNEWDIMSNGGPVQTIAN 624
V +RK+++DPGEP G++L A +SVWLP +P L+DFLR+E R EWDI+SNGGP+Q +A+
Sbjct: 605 VMTRKSVDDPGEPPGIVLSAATSVWLPAAPQRLYDFLRNERMRCEWDILSNGGPMQEMAH 664
Query: 625 LAKGQDRG-NAVNIQTMKSKENSMWLLQDSYTNAYESMVVYAPVDITGMQSVITGCDSSN 683
+ KGQD+G + + M + ++SM +LQ++ +A ++VVYAPVDI M V+ G DSS
Sbjct: 665 ITKGQDQGVSLLRSNAMNANQSSMLILQETCIDASGALVVYAPVDIPAMHVVMNGGDSSY 724
Query: 684 IAILPSGFSILPDG-LESRPLVITSRQEEKITEGGSLLSIAFQILTNNSPAAKLTMESVD 742
+A+LPSGF++LPDG ++ + +++ GGSLL++AFQIL NN P AKLT+ESV+
Sbjct: 725 VALLPSGFAVLPDGGIDGGG---SGDGDQRPVGGGSLLTVAFQILVNNLPTAKLTVESVE 781
Query: 743 SVNTLISCTLRNIKTSLQCE 762
+VN LISCT++ I+ +LQCE
Sbjct: 782 TVNNLISCTVQKIRAALQCE 801
Score = 47 (21.6 bits), Expect = 4.8e-157, Sum P(2) = 4.8e-157
Identities = 15/37 (40%), Positives = 20/37 (54%)
Query: 9 NPPTSRTKDFFASPALSLSLAGIFRGA--GASAAANN 43
+PP TK +AS LSL+L RG G ++ NN
Sbjct: 52 SPPL--TKSVYASSGLSLALEQPERGTNRGEASMRNN 86
>TAIR|locus:2207235 [details] [associations]
symbol:HDG2 "AT1G05230" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0010090 "trichome morphogenesis" evidence=IMP]
[GO:0010103 "stomatal complex morphogenesis" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005634 GO:GO:0010090 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:3.30.530.20
InterPro:IPR023393 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
HOGENOM:HOG000243256 eggNOG:NOG261733 ProtClustDB:CLSN2681990
EMBL:AC000098 EMBL:AY037177 EMBL:AY091690 IPI:IPI00530516
PIR:G86186 RefSeq:NP_001184911.1 RefSeq:NP_172015.1
RefSeq:NP_849596.1 UniGene:At.19179 UniGene:At.50922
ProteinModelPortal:Q94C37 SMR:Q94C37 STRING:Q94C37 PaxDb:Q94C37
PRIDE:Q94C37 EnsemblPlants:AT1G05230.1 EnsemblPlants:AT1G05230.2
EnsemblPlants:AT1G05230.4 GeneID:839256 KEGG:ath:AT1G05230
TAIR:At1g05230 InParanoid:Q94C37 OMA:VGVITNQ PhylomeDB:Q94C37
Genevestigator:Q94C37 Uniprot:Q94C37
Length = 721
Score = 1463 (520.1 bits), Expect = 6.9e-150, P = 6.9e-150
Identities = 304/674 (45%), Positives = 424/674 (62%)
Query: 113 YHRHTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHE 172
YHRHT QI+EMEA FKE PHPD+KQR+QLS++L L P QVKFWFQN+RTQ+K ERHE
Sbjct: 68 YHRHTQLQIQEMEAFFKECPHPDDKQRKQLSRELNLEPLQVKFWFQNKRTQMKNHHERHE 127
Query: 173 NSLLKSEIEKLREENKAMREAINKACCPNCGMATTSRDTSMTTEEQQLRIENARLKAEVE 232
NS L++E EKLR +N REA+ A CPNCG T + M+ +E QLR+ENARL+ E++
Sbjct: 128 NSHLRAENEKLRNDNLRYREALANASCPNCGGPTAIGE--MSFDEHQLRLENARLREEID 185
Query: 233 KLRAA----VGK------------CPPGATSTSSCSAGNDQENRSSLDFYTGIFG---ID 273
++ A VGK PP + + G + + D I D
Sbjct: 186 RISAIAAKYVGKPVSNYPLMSPPPLPPRPLELAMGNIGGEAYGNNPNDLLKSITAPTESD 245
Query: 274 KSRIMELVNQGMEELKKMATAGGPLWIRSLETGREILNYDEYVKEFSAENSSNGKSNRSI 333
K I++L MEEL +M PLW +SL +L+ +EY + F RS
Sbjct: 246 KPVIIDLSVAAMEELMRMVQVDEPLW-KSL-----VLDEEEYARTFPRGIGPRPAGYRS- 298
Query: 334 EASRDAGVVFVDLPKLVQSFTDVNQWKAMFPCLISKAATVDVICGGEGPNRNGAVQLMFA 393
EASR++ VV ++ +V+ DVNQW +F ++S+A T+ V+ G N NGA+Q+M A
Sbjct: 299 EASRESAVVIMNHVNIVEILMDVNQWSTIFAGMVSRAMTLAVLSTGVAGNYNGALQVMSA 358
Query: 394 ELQMLTPMVPTREVYFVRYCKQLSAEQWAIVDVSIDKVEENIDASLAKCRKRPSGCIVED 453
E Q+ +P+VPTRE YF RYCKQ WA+VD+S+D ++ N A +CR+R SGC++++
Sbjct: 359 EFQVPSPLVPTRETYFARYCKQQGDGSWAVVDISLDSLQPNPPA---RCRRRASGCLIQE 415
Query: 454 KSNGHCKVTWVEHLECQKGTVHTMYRSIVSSGLAFGARHWMTTLQLQCERLVFFMATNVP 513
NG+ KVTWVEH+E VH +Y+ +VS+G AFGA+ W+ L QCERL MATN+
Sbjct: 416 LPNGYSKVTWVEHVEVDDRGVHNLYKHMVSTGHAFGAKRWVAILDRQCERLASVMATNIS 475
Query: 514 TKDSSGVATLAGRKSILKLAQRMTWSFCRAIGASSYHVWNKVTSKTGEDIRVSSRKNLND 573
+ + + GR+S+LKLA+RM SFC + AS+ H W ++ ED+RV +RK+++D
Sbjct: 476 SGEVGVITNQEGRRSMLKLAERMVISFCAGVSASTAHTWTTLSGTGAEDVRVMTRKSVDD 535
Query: 574 PGEPLGVILCAVSSVWLPVSPNVLFDFLRDEAHRNEWDIMSNGGPVQTIANLAKGQDRGN 633
PG P G++L A +S W+PV P +FDFLRDE RNEWDI+SNGG VQ +A++A G+D GN
Sbjct: 536 PGRPPGIVLSAATSFWIPVPPKRVFDFLRDENSRNEWDILSNGGVVQEMAHIANGRDTGN 595
Query: 634 AVN---IQTMKSKENSMWLLQDSYTNAYESMVVYAPVDITGMQSVITGCDSSNIAILPSG 690
V+ + + S +++M +LQ+S T+ S V+YAPVDI M V+ G D +A+LPSG
Sbjct: 596 CVSLLRVNSANSSQSNMLILQESCTDPTASFVIYAPVDIVAMNIVLNGGDPDYVALLPSG 655
Query: 691 FSILPDGLESRPLVITSRQEEKITEGGSLLSIAFQILTNNSPAAKLTMESVDSVNTLISC 750
F+ILPDG + +GGSLL++AFQIL ++ P AKL++ SV +VN LI+C
Sbjct: 656 FAILPDG--------NANSGAPGGDGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIAC 707
Query: 751 TLRNIKTSLQCEDA 764
T+ IK S+ CE A
Sbjct: 708 TVERIKASMSCETA 721
>TAIR|locus:2135368 [details] [associations]
symbol:PDF2 "AT4G04890" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0009913 "epidermal cell differentiation"
evidence=IMP] [GO:0048825 "cotyledon development" evidence=IGI]
[GO:0006473 "protein acetylation" evidence=RCA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=RCA] [GO:0010027
"thylakoid membrane organization" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0016226 "iron-sulfur cluster assembly"
evidence=RCA] [GO:0048481 "ovule development" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 EMBL:AL161502 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:3.30.530.20 InterPro:IPR023393 Pfam:PF01852 SMART:SM00234
PROSITE:PS50848 HOGENOM:HOG000243256 KO:K09338 HSSP:Q6B2C0
eggNOG:NOG261733 ProtClustDB:CLSN2681990 GO:GO:0048825
GO:GO:0009913 EMBL:AF128393 EMBL:AB056455 EMBL:AF424560
EMBL:AY062575 EMBL:BT000144 IPI:IPI00536198 PIR:E85061
RefSeq:NP_567274.1 UniGene:At.4047 ProteinModelPortal:Q93V99
SMR:Q93V99 IntAct:Q93V99 PaxDb:Q93V99 PRIDE:Q93V99
EnsemblPlants:AT4G04890.1 GeneID:825828 KEGG:ath:AT4G04890
TAIR:At4g04890 InParanoid:Q93V99 OMA:MIPARHM PhylomeDB:Q93V99
Genevestigator:Q93V99 Uniprot:Q93V99
Length = 743
Score = 1450 (515.5 bits), Expect = 1.6e-148, P = 1.6e-148
Identities = 306/681 (44%), Positives = 433/681 (63%)
Query: 113 YHRHTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHE 172
YHRHT QI+E+E+ FKE PHPD+KQR++LS+ L L P QVKFWFQN+RTQ+K ERHE
Sbjct: 66 YHRHTQRQIQELESFFKECPHPDDKQRKELSRDLNLEPLQVKFWFQNKRTQMKAQSERHE 125
Query: 173 NSLLKSEIEKLREENKAMREAINKACCPNCG----MATTSRDTS-MTTEEQQLRIENARL 227
N +LKS+ +KLR EN +EA++ A CPNCG + S D + E +LR E R+
Sbjct: 126 NQILKSDNDKLRAENNRYKEALSNATCPNCGGPAAIGEMSFDEQHLRIENARLREEIDRI 185
Query: 228 KAEVEK-LRAAVGKC-PPGATSTSSCSAGNDQENRSSLDFYTG-IFGI------------ 272
A K + +G P A S S + N + + G ++G
Sbjct: 186 SAIAAKYVGKPLGSSFAPLAIHAPSRSLDLEVGNFGNQTGFVGEMYGTGDILRSVSIPSE 245
Query: 273 -DKSRIMELVNQGMEELKKMATAGGPLWIRSLETGREILNYDEYVKEFSAENSSNGKSNR 331
DK I+EL MEEL +MA G PLW+ S + EILN +EY + F R
Sbjct: 246 TDKPIIVELAVAAMEELVRMAQTGDPLWL-STDNSVEILNEEEYFRTFPRGIGPKPLGLR 304
Query: 332 SIEASRDAGVVFVDLPKLVQSFTDVNQWKAMFPCLISKAATVDVICGGEGPNRNGAVQLM 391
S EASR + VV ++ LV+ DVNQW +F ++S+A T++V+ G N NGA+Q+M
Sbjct: 305 S-EASRQSAVVIMNHINLVEILMDVNQWSCVFSGIVSRALTLEVLSTGVAGNYNGALQVM 363
Query: 392 FAELQMLTPMVPTREVYFVRYCKQLSAEQWAIVDVSIDKVEENIDASLAKCRKRPSGCIV 451
AE Q+ +P+VPTRE YFVRYCKQ S WA+VDVS+D + + + + R+RPSGC++
Sbjct: 364 TAEFQVPSPLVPTRENYFVRYCKQHSDGSWAVVDVSLDSLRPS--TPILRTRRRPSGCLI 421
Query: 452 EDKSNGHCKVTWVEHLECQKGTVHTMYRSIVSSGLAFGARHWMTTLQLQCERLVFFMATN 511
++ NG+ KVTW+EH+E +VH MY+ +V SGLAFGA+ W+ TL+ QCERL MA+N
Sbjct: 422 QELPNGYSKVTWIEHMEVDDRSVHNMYKPLVQSGLAFGAKRWVATLERQCERLASSMASN 481
Query: 512 VPTKDSSGVATLAGRKSILKLAQRMTWSFCRAIGASSYHVWNKVTSKTGEDIRVSSRKNL 571
+P D S + + GRKS+LKLA+RM SFC +GAS+ H W +++ +D+RV +RK++
Sbjct: 482 IPG-DLSVITSPEGRKSMLKLAERMVMSFCSGVGASTAHAWTTMSTTGSDDVRVMTRKSM 540
Query: 572 NDPGEPLGVILCAVSSVWLPVSPNVLFDFLRDEAHRNEWDIMSNGGPVQTIANLAKGQDR 631
+DPG P G++L A +S W+PV+P +FDFLRDE R EWDI+SNGG VQ +A++A G +
Sbjct: 541 DDPGRPPGIVLSAATSFWIPVAPKRVFDFLRDENSRKEWDILSNGGMVQEMAHIANGHEP 600
Query: 632 GNAVN---IQTMKSKENSMWLLQDSYTNAYESMVVYAPVDITGMQSVITGCDSSNIAILP 688
GN V+ + + S +++M +LQ+S T+A S V+YAPVDI M V++G D +A+LP
Sbjct: 601 GNCVSLLRVNSGNSSQSNMLILQESCTDASGSYVIYAPVDIVAMNVVLSGGDPDYVALLP 660
Query: 689 SGFSILPDGL-------ESRPLVITSRQEEKITEGGSLLSIAFQILTNNSPAAKLTMESV 741
SGF+ILPDG + + +V T+ GGSLL++AFQIL ++ P AKL++ SV
Sbjct: 661 SGFAILPDGSVGGGDGNQHQEMVSTTSSGSC---GGSLLTVAFQILVDSVPTAKLSLGSV 717
Query: 742 DSVNTLISCTLRNIKTSLQCE 762
+VN+LI CT+ IK ++ C+
Sbjct: 718 ATVNSLIKCTVERIKAAVSCD 738
>TAIR|locus:2206880 [details] [associations]
symbol:HDG11 "AT1G73360" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;IDA] [GO:0005634 "nucleus"
evidence=ISM;IEA;ISS;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0010091 "trichome branching"
evidence=IGI;IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:3.30.530.20
InterPro:IPR023393 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
HOGENOM:HOG000243256 GO:GO:0010091 HSSP:P02836 KO:K09338
EMBL:AC012396 EMBL:BT003979 EMBL:BT004915 IPI:IPI00520147
PIR:B96760 RefSeq:NP_177479.1 UniGene:At.34997
ProteinModelPortal:Q9FX31 SMR:Q9FX31 IntAct:Q9FX31 PaxDb:Q9FX31
PRIDE:Q9FX31 EnsemblPlants:AT1G73360.1 GeneID:843671
KEGG:ath:AT1G73360 TAIR:At1g73360 eggNOG:NOG70408 InParanoid:Q9FX31
OMA:MKLAQRM PhylomeDB:Q9FX31 ProtClustDB:CLSN2679864
Genevestigator:Q9FX31 Uniprot:Q9FX31
Length = 722
Score = 896 (320.5 bits), Expect = 5.4e-130, Sum P(2) = 5.4e-130
Identities = 198/524 (37%), Positives = 314/524 (59%)
Query: 243 PGATSTSSCSAGNDQENRSSLDFYTGIFGIDKSRIMELVNQGMEELKKMATAGGPLWIRS 302
PG S+ + N+ +++ +L I +DK + + MEEL ++ PLW R+
Sbjct: 206 PG--SSMAVGPNNNLQSQPNL----AISDMDKPIMTGIALTAMEELLRLLQTNEPLWTRT 259
Query: 303 LETGREILNYDEYVKEFSAENSSNGKS-NRSIEASRDAGVVFVDLPKLVQSFTDVNQWKA 361
+ R+ILN Y F +S+ GK+ N +EASR +G+VF++ LV F D +W
Sbjct: 260 -DGCRDILNLGSYENVFP-RSSNRGKNQNFRVEASRSSGIVFMNAMALVDMFMDCVKWTE 317
Query: 362 MFPCLISKAATVDVICGGEGPNRNGAVQLMFAELQMLTPMVPTREVYFVRYCKQLSAEQW 421
+FP +I+ + T+ VI G G GA+ L++ E+++L+P+V TRE +RYC+Q W
Sbjct: 318 LFPSIIAASKTLAVISSGMGGTHEGALHLLYEEMEVLSPLVATREFCELRYCQQTEQGSW 377
Query: 422 AIVDVSIDKVEENIDASLAKCRKRPSGCIVEDKSNGHCKVTWVEHLECQ-KGTVHTMYRS 480
+V+VS D + S ++ + PSGC+++D NG+ KVTWVEH+E + K VH +YR
Sbjct: 378 IVVNVSYDLPQF---VSHSQSYRFPSGCLIQDMPNGYSKVTWVEHIETEEKELVHELYRE 434
Query: 481 IVSSGLAFGARHWMTTLQLQCERLVFFMATNVPTKDSSGVA-TLAGRKSILKLAQRMTWS 539
I+ G+AFGA W+TTLQ CER ++D GV + G++S+++LAQRM +
Sbjct: 435 IIHRGIAFGADRWVTTLQRMCERFASLSVPASSSRDLGGVILSPEGKRSMMRLAQRMISN 494
Query: 540 FCRAIGASSYHVWNKVTSKTGE-DIRVSSRKNLNDPGEPLGVILCAVSSVWLPVSPNVLF 598
+C ++ S+ + + V S+ E IRV++ K+ P EP G +LCA ++ WLP SP +F
Sbjct: 495 YCLSVSRSN-NTRSTVVSELNEVGIRVTAHKS---P-EPNGTVLCAATTFWLPNSPQNVF 549
Query: 599 DFLRDEAHRNEWDIMSNGGPVQTIANLAKGQDRGNAVNIQ--TMKSKENSMWLLQDSYTN 656
+FL+DE R +WD++SNG VQ +A+++ G GN +++ + + N+M +LQ+S T+
Sbjct: 550 NFLKDERTRPQWDVLSNGNAVQEVAHISNGSHPGNCISVLRGSNATHSNNMLILQESSTD 609
Query: 657 AYESMVVYAPVDITGMQSVITGCDSSNIAILPSGFSILPDGLESRPLVI-TSRQEEKITE 715
+ + VVY+PVD+ + ++G D S I +L SGF+I PDG S S + +
Sbjct: 610 SSGAFVVYSPVDLAALNIAMSGEDPSYIPLLSSGFTISPDGNGSNSEQGGASTSSGRASA 669
Query: 716 GGSLLSIAFQILTNNSPAAKLTMESVDSVNTLISCTLRNIKTSL 759
GSL+++ FQI+ +N P AKL MESV++VN LI T+ IKT+L
Sbjct: 670 SGSLITVGFQIMVSNLPTAKLNMESVETVNNLIGTTVHQIKTAL 713
Score = 400 (145.9 bits), Expect = 5.4e-130, Sum P(2) = 5.4e-130
Identities = 76/128 (59%), Positives = 96/128 (75%)
Query: 113 YHRHTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHE 172
YHRHTA+QI+ +E+ FKE PHPDEKQR QLS++LGLAPRQ+KFWFQNRRTQ+K ER +
Sbjct: 36 YHRHTAQQIQRLESSFKECPHPDEKQRNQLSRELGLAPRQIKFWFQNRRTQLKAQHERAD 95
Query: 173 NSLLKSEIEKLREENKAMREAINKACCPNCGMATTSRDTSMTTEEQQLRIENARLKAEVE 232
NS LK+E +K+R EN A+REA+ A CPNCG S D +EQ+LRIENA L+ E+E
Sbjct: 96 NSALKAENDKIRCENIAIREALKHAICPNCGGPPVSEDPYF--DEQKLRIENAHLREELE 153
Query: 233 KLRAAVGK 240
++ K
Sbjct: 154 RMSTIASK 161
>TAIR|locus:2030913 [details] [associations]
symbol:HDG12 "homeodomain GLABROUS 12" species:3702
"Arabidopsis thaliana" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0010091 "trichome
branching" evidence=IGI] [GO:0000724 "double-strand break repair
via homologous recombination" evidence=RCA] [GO:0031507
"heterochromatin assembly" evidence=RCA] [GO:0045787 "positive
regulation of cell cycle" evidence=RCA] [GO:0048451 "petal
formation" evidence=RCA] [GO:0048453 "sepal formation"
evidence=RCA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 INTERPRO:IPR002913 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 EMBL:AC034106 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:3.30.530.20 InterPro:IPR023393 Pfam:PF01852 SMART:SM00234
PROSITE:PS50848 HOGENOM:HOG000243256 GO:GO:0010091 HSSP:P02836
KO:K09338 eggNOG:NOG70408 ProtClustDB:CLSN2679864 EMBL:AF424554
EMBL:BT001050 IPI:IPI00531481 PIR:D86314 RefSeq:NP_564041.2
UniGene:At.15827 ProteinModelPortal:Q9LMT8 SMR:Q9LMT8 PaxDb:Q9LMT8
PRIDE:Q9LMT8 EnsemblPlants:AT1G17920.1 GeneID:838371
KEGG:ath:AT1G17920 TAIR:At1g17920 InParanoid:Q9LMT8 OMA:CENIAMQ
PhylomeDB:Q9LMT8 Genevestigator:Q9LMT8 Uniprot:Q9LMT8
Length = 687
Score = 882 (315.5 bits), Expect = 1.0e-124, Sum P(2) = 1.0e-124
Identities = 193/498 (38%), Positives = 302/498 (60%)
Query: 272 IDKSRIMELVNQGMEELKKMATAGGPLWIRSLETGREILNYDEYVKEFSAENSSNGKSNR 331
+DKS + + MEEL ++ PLWI++ + R++LN + Y F+ ++S GK N
Sbjct: 208 MDKSLMTNIAVTAMEELLRLLQTNEPLWIKT-DGCRDVLNLENYENMFTRSSTSGGKKNN 266
Query: 332 -SIEASRDAGVVFVDLPKLVQSFTDVNQWKAMFPCLISKAATVDVICGGEGPNRNGAVQL 390
+EASR +GVVF + LV + + +FP +++ + T+ VI G N A+ L
Sbjct: 267 LGMEASRSSGVVFTNAITLVDMLMNSVKLTELFPSIVASSKTLAVISSGLRGNHGDALHL 326
Query: 391 MFAELQMLTPMVPTREVYFVRYCKQLSAEQWAIVDVSIDKVEENIDASLAKCRKRPSGCI 450
M ELQ+L+P+V TRE +RYC+Q+ WAIV+VS + + I S + + PSGC+
Sbjct: 327 MIEELQVLSPLVTTREFCVLRYCQQIEHGTWAIVNVSYE-FPQFISQS--RSYRFPSGCL 383
Query: 451 VEDKSNGHCKVTWVEHLECQKGT-VHTMYRSIVSSGLAFGARHWMTTLQLQCERLVFFMA 509
++D SNG+ KVTWVEH E ++ +H M++ IV GLAFGA W+ TLQ CER +
Sbjct: 384 IQDMSNGYSKVTWVEHGEFEEQEPIHEMFKDIVHKGLAFGAERWIATLQRMCERFTNLLE 443
Query: 510 TNVPTKDSSGVA-TLAGRKSILKLAQRMTWSFCRAIGASSYHVWNKVTSKTGE-DIRVSS 567
+ D GV + G++SI++LA RM +FC ++G S+ + + V S E IRV+S
Sbjct: 444 PATSSLDLGGVIPSPEGKRSIMRLAHRMVSNFCLSVGTSN-NTRSTVVSGLDEFGIRVTS 502
Query: 568 RKNLNDPGEPLGVILCAVSSVWLPVSPNVLFDFLRDEAHRNEWDIMSNGGPVQTIANLAK 627
K+ ++P G++LCA +S WLP+SP +F+FL+DE R +WD++SNG VQ +A++
Sbjct: 503 HKSRHEPN---GMVLCAATSFWLPISPQNVFNFLKDERTRPQWDVLSNGNSVQEVAHITN 559
Query: 628 GQDRGNAVNIQ---TMKSKENSMWLLQDSYTNAYES-MVVYAPVDITGMQSVITGCDSSN 683
G + GN +++ S +N+M +LQ+S ++ + +V+Y PVD+ + ++G D+S
Sbjct: 560 GSNPGNCISVLRGFNASSSQNNMLILQESCIDSSSAALVIYTPVDLPALNIAMSGQDTSY 619
Query: 684 IAILPSGFSILPDGLESRPLVITSRQEEKITEGGSLLSIAFQILTNNSPAAKLTMESVDS 743
I ILPSGF+I PDG +S+ GGSL+++ FQI+ + AKL MES+++
Sbjct: 620 IPILPSGFAISPDG--------SSKG------GGSLITVGFQIMVSGLQPAKLNMESMET 665
Query: 744 VNTLISCTLRNIKTSLQC 761
VN LI+ T+ IKT+L C
Sbjct: 666 VNNLINTTVHQIKTTLNC 683
Score = 364 (133.2 bits), Expect = 1.0e-124, Sum P(2) = 1.0e-124
Identities = 70/128 (54%), Positives = 93/128 (72%)
Query: 113 YHRHTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHE 172
+HRHT QI+ +E+ F E HPDEKQR QLS++LGLAPRQ+KFWFQNRRTQ K ER +
Sbjct: 25 FHRHTPHQIQRLESTFNECQHPDEKQRNQLSRELGLAPRQIKFWFQNRRTQKKAQHERAD 84
Query: 173 NSLLKSEIEKLREENKAMREAINKACCPNCGMATTSRDTSMTTEEQQLRIENARLKAEVE 232
N LK E +K+R EN A+REAI A CP+CG + + D+ +EQ+LRIENA+L+ E+E
Sbjct: 85 NCALKEENDKIRCENIAIREAIKHAICPSCGDSPVNEDSYF--DEQKLRIENAQLRDELE 142
Query: 233 KLRAAVGK 240
++ + K
Sbjct: 143 RVSSIAAK 150
>TAIR|locus:2062540 [details] [associations]
symbol:HDG3 "AT2G32370" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048825 "cotyledon development" evidence=IGI]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:3.30.530.20
InterPro:IPR023393 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
HOGENOM:HOG000243256 KO:K09338 eggNOG:NOG261733 GO:GO:0048825
EMBL:AC005700 EMBL:EF988635 IPI:IPI00527257 PIR:C84732
RefSeq:NP_180796.2 UniGene:At.38083 ProteinModelPortal:Q9ZV65
SMR:Q9ZV65 PaxDb:Q9ZV65 PRIDE:Q9ZV65 EnsemblPlants:AT2G32370.1
GeneID:817798 KEGG:ath:AT2G32370 TAIR:At2g32370 InParanoid:A7LBA8
PhylomeDB:Q9ZV65 Genevestigator:Q9ZV65 Uniprot:Q9ZV65
Length = 725
Score = 1194 (425.4 bits), Expect = 2.2e-121, P = 2.2e-121
Identities = 277/676 (40%), Positives = 384/676 (56%)
Query: 113 YHRHTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHE 172
Y+RHT QI EMEA F+E PHPD+KQR LS QLGL P Q+KFWFQN+RTQ K QER E
Sbjct: 72 YNRHTQLQISEMEAFFRECPHPDDKQRYDLSAQLGLDPVQIKFWFQNKRTQNKNQQERFE 131
Query: 173 NSLLKSEIEKLREENKAMREAINKACCPNCGMATTSRDTSMTTEEQQLRIENARLKAEVE 232
NS L++ LR EN+ +REAI++A CP CG T + MT EE LRI NARL E++
Sbjct: 132 NSELRNLNNHLRSENQRLREAIHQALCPKCGGQTAIGE--MTFEEHHLRILNARLTEEIK 189
Query: 233 KLRAAVGKC---------------PPGATSTSSCSAGNDQENRSSLDFYTGIFGID-KSR 276
+L K PP G+ + TG + K
Sbjct: 190 QLSVTAEKISRLTGIPVRSHPRVSPPNPPPNFEFGMGSKGNVGNHSRETTGPADANTKPI 249
Query: 277 IMELVNQGMEELKKMATAGGPLWIRSLETGREILNYDEYVKEFSAENSSNGKSNRSIEAS 336
IMEL MEEL MA PLW+ LN DEY K F R+ EAS
Sbjct: 250 IMELAFGAMEELLVMAQVAEPLWMGGFNGTSLALNLDEYEKTFRTGLGPRLGGFRT-EAS 308
Query: 337 RDAGVVFVDLPKLVQSFTDVNQWKAMFPCLISKAATVDVICGGEGPNRNGAVQLMFAELQ 396
R+ +V + +V+ N W MF ++ +A T + I N NG +Q+M AE Q
Sbjct: 309 RETALVAMCPTGIVEMLMQENLWSTMFAGIVGRARTHEQIMADAAGNFNGNLQIMSAEYQ 368
Query: 397 MLTPMVPTREVYFVRYCKQLSAEQWAIVDVSIDKVEENIDASLAKCRKRPSGCIVEDKSN 456
+L+P+V TRE YFVRYCKQ WA+VD+SID + NI+ KCR+RPSGC++++ +
Sbjct: 369 VLSPLVTTRESYFVRYCKQQGEGLWAVVDISIDHLLPNINL---KCRRRPSGCLIQEMHS 425
Query: 457 GHCKVTWVEHLECQKGTVHTMYRSIVSSGLAFGARHWMTTLQLQCERLVFFMATNVPTKD 516
G+ KVTWVEH+E ++++ ++ +G AF A W+ TL QCER+ ++T+ + D
Sbjct: 426 GYSKVTWVEHVEVDDAGSYSIFEKLICTGQAFAANRWVGTLVRQCERISSILSTDFQSVD 485
Query: 517 SSGVATLA--GRKSILKLAQRMTWSFCRAI-GASSYHVWNKVTSKTGEDIRVSSRKNLND 573
S TL G+ S+LK+A+R+ +F + A+ +++ V GEDIRV + K++ND
Sbjct: 486 SGDHITLTNHGKMSMLKIAERIARTFFAGMTNATGSTIFSGVE---GEDIRVMTMKSVND 542
Query: 574 PGEPLGVILCAVSSVWLPVSPNVLFDFLRDEAHRNEWDIMSNGGPVQTIANLAKGQDRGN 633
PG+P GVI+CA +S WLP PN +FDFLR+ HR+ WD++ NG + IA + G D+ N
Sbjct: 543 PGKPPGVIICAATSFWLPAPPNTVFDFLREATHRHNWDVLCNGEMMHKIAEITNGIDKRN 602
Query: 634 AVNI----QTMKSKENSMWLLQDSYTNAYESMVVYAPVDITGMQSVITGC-DSSNIAILP 688
++ T KSK M ++Q++ T+ S V+YAPVD+T M + G D + ILP
Sbjct: 603 CASLLRHGHTSKSK---MMIVQETSTDPTASFVLYAPVDMTSMDITLHGGGDPDFVVILP 659
Query: 689 SGFSILPDGLESRPLVITSRQEEKITEGGSLLSIAFQILTNNSPAAKLTMESVDSVNTLI 748
SGF+I PDG T + K EGGSLL+I+FQ+L + P A+L++ SV + LI
Sbjct: 660 SGFAIFPDG--------TGKPGGK--EGGSLLTISFQMLVESGPEARLSVSSVATTENLI 709
Query: 749 SCTLRNIKTSLQCEDA 764
T+R IK C+ A
Sbjct: 710 RTTVRRIKDLFPCQTA 725
>TAIR|locus:2167230 [details] [associations]
symbol:HDG9 "AT5G17320" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;IDA] InterPro:IPR001356 InterPro:IPR009057
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:3.30.530.20
InterPro:IPR023393 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
HOGENOM:HOG000243256 EMBL:AB005238 ProtClustDB:CLSN2679643
IPI:IPI00529269 RefSeq:NP_197234.1 UniGene:At.54882
ProteinModelPortal:Q9FFI0 SMR:Q9FFI0 EnsemblPlants:AT5G17320.1
GeneID:831598 KEGG:ath:AT5G17320 TAIR:At5g17320 eggNOG:KOG0493
InParanoid:Q9FFI0 PhylomeDB:Q9FFI0 Genevestigator:Q9FFI0
Uniprot:Q9FFI0
Length = 718
Score = 697 (250.4 bits), Expect = 4.1e-100, Sum P(2) = 4.1e-100
Identities = 167/503 (33%), Positives = 272/503 (54%)
Query: 272 IDKSRIMELVNQGMEELKKMATAGGPLWIRSLETGREILNYDEYVKEFSAENSSNGKSNR 331
++K ++E + + E+ + +W +S R +++ Y K F+ N+ NG+
Sbjct: 234 LEKIAMLEAAEKAVSEVLSLIQMDDTMWKKSSIDDRLVIDPGLYEKYFTKTNT-NGRP-- 290
Query: 332 SIEASRDAGVVFVDLPKLVQSFTDVNQWKAMFPCLISKAATVDVICGGEGPNRNGAVQLM 391
E+S+D VV +D L+ F +W +FP ++++A T+ V+ + + + +++
Sbjct: 291 --ESSKDVVVVQMDAGNLIDIFLTAEKWARLFPTIVNEAKTIHVLDSVDHRGKTFS-RVI 347
Query: 392 FAELQMLTPMVPTREVYFVRYCKQLSAEQWAIVDVSIDKVEENIDASLAKCRKRPSGCIV 451
+ +L +L+P+VP RE +R C+Q+ W I DVS D S C KRPSG ++
Sbjct: 348 YEQLHILSPLVPPREFMILRTCQQIEDNVWMIADVSCHLPNIEFDLSFPICTKRPSGVLI 407
Query: 452 EDKSNGHCKVTWVEHLECQKGTV--HTMYRSIVSSGLAFGARHWMTTLQLQCERLVFFMA 509
+ +G KVTW+EH+ V H +YR ++ G +GAR W TL+ CERL+F +
Sbjct: 408 QALPHGFSKVTWIEHVVVNDNRVRPHKLYRDLLYGGFGYGARRWTVTLERTCERLIFSTS 467
Query: 510 TN-VPTKDSSGVA-TLAGRKSILKLAQRMTWSFCRAIGASSYHVWNKVTSKTGEDIRVSS 567
+P D+ GV T+ GR S++ L +RM +F + + ++ + IR+
Sbjct: 468 VPALPNNDNPGVVQTIRGRNSVMHLGERMLRNFAWMMKMVNKLDFSPQSETNNSGIRIGV 527
Query: 568 RKNLNDPGEPLGVILCAVSSVWLPVSPNVLFDFLRDEAHRNEWDIMSNGGPVQTIANLAK 627
R N N+ G+P G+I+CA SS+ LP+ P ++DFL++ R++WD++ +G P A
Sbjct: 528 RIN-NEAGQPPGLIVCAGSSLSLPLPPVQVYDFLKNLEVRHQWDVLCHGNPATEAARFVT 586
Query: 628 GQDRGNAVNI--QTMKSKENSMWLLQDSYTNAYESMVVYAPVDITGMQSVITG-CDSSNI 684
G + N V+ +++ + +LQDS+ +A MV YAP+D+ + I+G D + I
Sbjct: 587 GSNPRNTVSFLEPSIRDINTKLMILQDSFKDALGGMVAYAPMDLNTACAAISGDIDPTTI 646
Query: 685 AILPSGFSILPDGLESRPLVITSRQEEKITEGGS--LLSIAFQILTNN---SPAAKLTME 739
ILPSGF I DG RP S E EGGS LL++AFQIL + SP L +
Sbjct: 647 PILPSGFMISRDG---RP----SEGE---AEGGSYTLLTVAFQILVSGPSYSPDTNLEV- 695
Query: 740 SVDSVNTLISCTLRNIKTSLQCE 762
S +VNTLIS T++ IK L+CE
Sbjct: 696 SATTVNTLISSTVQRIKAMLKCE 718
Score = 316 (116.3 bits), Expect = 4.1e-100, Sum P(2) = 4.1e-100
Identities = 59/122 (48%), Positives = 83/122 (68%)
Query: 113 YHRHTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHE 172
YHRHT EQI +E FKE PHPDE QR+ L ++L L P+Q+KFWFQN+RTQ K+ E+ +
Sbjct: 30 YHRHTNEQIHRLETYFKECPHPDEFQRRLLGEELNLKPKQIKFWFQNKRTQAKSHNEKAD 89
Query: 173 NSLLKSEIEKLREENKAMREAINKACCPNCGMATTSRDTSMTTEEQQLRIENARLKAEVE 232
N+ L++E K+R EN++M +A+N CP CG R+ + Q+LR +NA LK E E
Sbjct: 90 NAALRAENIKIRRENESMEDALNNVVCPPCGGRGPGREDQLR-HLQKLRAQNAYLKDEYE 148
Query: 233 KL 234
++
Sbjct: 149 RV 150
>TAIR|locus:2097770 [details] [associations]
symbol:HDG8 "AT3G03260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 INTERPRO:IPR002913
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:3.30.530.20 InterPro:IPR023393 Pfam:PF01852 SMART:SM00234
PROSITE:PS50848 HOGENOM:HOG000243256 KO:K09338 EMBL:AC012328
EMBL:AK117867 IPI:IPI00538783 RefSeq:NP_186976.2 UniGene:At.41007
ProteinModelPortal:Q9M9P4 SMR:Q9M9P4 PRIDE:Q9M9P4
EnsemblPlants:AT3G03260.1 GeneID:821305 KEGG:ath:AT3G03260
TAIR:At3g03260 InParanoid:Q9M9P4 OMA:LNMESVA PhylomeDB:Q9M9P4
Genevestigator:Q9M9P4 Uniprot:Q9M9P4
Length = 699
Score = 988 (352.9 bits), Expect = 1.5e-99, P = 1.5e-99
Identities = 244/691 (35%), Positives = 370/691 (53%)
Query: 114 HRHTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHEN 173
HRHT +QI+ +EA FKE PHPDE+QR QL ++L L P Q+KFWFQN+RTQ KT ++R N
Sbjct: 28 HRHTPQQIQRLEAYFKECPHPDERQRNQLCRELKLEPDQIKFWFQNKRTQSKTQEDRSTN 87
Query: 174 SLLKSEIEKLREENKAMREAINKACCPNCGMATTSRDTSMTTEEQQLRIENARLKAEVEK 233
LL+ E E L+ +N+AM +A+ CP CG R+ Q+LR ENARLK ++
Sbjct: 88 VLLRGENETLQSDNEAMLDALKSVLCPACGGPPFGRE-ERGHNLQKLRFENARLKDHRDR 146
Query: 234 LRAAVGKCPPGATSTSSCSA--------------GNDQENRSSL---DFYT----GIFGI 272
+ V + P + A GN E SS +F +
Sbjct: 147 ISNFVDQHKPNEPTVEDSLAYVPSLDRISYGINGGNMYEPSSSYGPPNFQIIQPRPLAET 206
Query: 273 DKSRIMELVNQGMEELKKMATAGGPLWIRSLETGREILNYDEYVKEFSAENSSNGKSNRS 332
D S + E+ +EELK++ A W++S +++ + Y + FS +
Sbjct: 207 DMSLLSEIAASAVEELKRLFLAEEQFWVKSCIDETYVIDTESY-ERFSHAVKHFSSTTAH 265
Query: 333 IEASRDAGVVFVDLPKLVQSFTDVNQWKAMFPCLISKAATVDVICGGEGPNRN-GAVQLM 391
+E+S+ VV V+ L+Q F D +WK +FP +++KA T+ V+ G N +Q+M
Sbjct: 266 VESSKAVTVVHVEAINLIQMFLDPEKWKELFPTIVNKANTIHVLGSGLPIRGNCNVLQVM 325
Query: 392 FAELQMLTPMVPTREVYFVRYCKQLSAEQWAIVDVSIDKVEENIDASLAKCRKRPSGCIV 451
+ +L +L+P+VP RE VR C+++ W I DVS N D A C KRPSGC++
Sbjct: 326 WEQLHILSPLVPAREFMVVRCCQEIEKGIWIIADVSH---RANFDFGNAACYKRPSGCLI 382
Query: 452 EDKSNGHCKVTWVEHLECQ-KGTVHTMYRSIVSSGLAFGARHWMTTLQLQCERLVFFMAT 510
+ + H KV W+EH+E K H +YR ++S G +GA+ W+ TL+ CER+
Sbjct: 383 QALPDAHSKVMWIEHVEVDHKLDTHKIYRDLLSGGSGYGAKRWIVTLERMCERMALSSIQ 442
Query: 511 NVPTKDSSGVATLA-GRKSILKLAQRMTWSFCRAIGASSYHVWNKVTSKTGEDIRVSSRK 569
+P D S V T R+S++KL +RM +F + S + + SK G +RVS R
Sbjct: 443 TLPPSDRSEVITTGEARRSVMKLGERMVKNFNEMLTMSGKIDFPQ-QSKNG--VRVSIRM 499
Query: 570 NLNDPGEPLGVILCAVSSVWLPVSPNVLFDFLRDEAHRNEWDIMSNGGPVQTIANLAKGQ 629
N+ + G+P G+++ A SS+ +P++P +F FL++ R +WDI+S G V IA + G
Sbjct: 500 NI-EAGQPPGIVVSASSSLAIPLTPLQVFAFLQNLDTRQQWDILSYGTVVNEIARIVTGS 558
Query: 630 DRGNAVNIQTMKS--KENS------------MWLLQDSYTNAYESMVVYAPVDITGMQSV 675
N V I + +EN+ M +LQD Y +A M+VYAP+D+ M
Sbjct: 559 SETNCVTILRVHPTHEENNDKMVVQDSCKDDMLMLQDCYMDALGGMIVYAPMDMATMHFA 618
Query: 676 ITG-CDSSNIAILPSGFSILPDGLESRPLVITSRQEEKITEGGSLLSIAFQILTNNSP-- 732
++G D S+I ILPSGF I DG S + +GG+LL++AFQIL +
Sbjct: 619 VSGEVDPSHIPILPSGFVISSDGRRST-----------VEDGGTLLTVAFQILVSGKANR 667
Query: 733 AAKLTMESVDSVNTLISCTLRNIKTSLQCED 763
+ ++ +SVD+V+ LIS T++ IK L C +
Sbjct: 668 SREVNEKSVDTVSALISSTIQRIKGLLNCPE 698
>TAIR|locus:2131814 [details] [associations]
symbol:FWA "AT4G25530" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006349 "regulation of gene expression by genetic
imprinting" evidence=IEP] [GO:0031047 "gene silencing by RNA"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009909 "regulation of flower development" evidence=IEP;RCA]
[GO:0042803 "protein homodimerization activity" evidence=IPI]
[GO:0007155 "cell adhesion" evidence=RCA] [GO:0010090 "trichome
morphogenesis" evidence=RCA] [GO:0045010 "actin nucleation"
evidence=RCA] [GO:0048573 "photoperiodism, flowering" evidence=RCA]
[GO:0048765 "root hair cell differentiation" evidence=RCA]
[GO:0071555 "cell wall organization" evidence=RCA] [GO:0009911
"positive regulation of flower development" evidence=IMP]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 INTERPRO:IPR002913 GO:GO:0007275
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 EMBL:AL022197 EMBL:AL161563
Gene3D:1.10.10.60 SUPFAM:SSF46689 Pfam:PF01852 SMART:SM00234
PROSITE:PS50848 GO:GO:0009911 GO:GO:0031047 HOGENOM:HOG000243256
GO:GO:0006349 EMBL:AF178688 EMBL:AF243535 IPI:IPI00545721
PIR:A85295 RefSeq:NP_567722.1 UniGene:At.2139
ProteinModelPortal:Q9FVI6 SMR:Q9FVI6 IntAct:Q9FVI6 STRING:Q9FVI6
PaxDb:Q9FVI6 PRIDE:Q9FVI6 EnsemblPlants:AT4G25530.1 GeneID:828658
KEGG:ath:AT4G25530 TAIR:At4g25530 eggNOG:NOG295539
InParanoid:Q9FVI6 PhylomeDB:Q9FVI6 Genevestigator:Q9FVI6
GermOnline:AT4G25530 Uniprot:Q9FVI6
Length = 686
Score = 966 (345.1 bits), Expect = 3.2e-97, P = 3.2e-97
Identities = 228/661 (34%), Positives = 363/661 (54%)
Query: 114 HRHTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHEN 173
HR TA Q +E+E + E+PHP E+QR +L ++L + QVK WFQN+R K + EN
Sbjct: 45 HRRTAYQTQELENFYMENPHPTEEQRYELGQRLNMGVNQVKNWFQNKRNLEKINNDHLEN 104
Query: 174 SLLKSEIEKLREENKAMREAINKACCPNCGMATTSRDTSMTTEEQQLRIENARLKAEVEK 233
L+ E ++L +R A+ ++ C CG AT DT E Q+L ENA L+ E+++
Sbjct: 105 VTLREEHDRLLATQDQLRSAMLRSLCNICGKATNCGDTEY--EVQKLMAENANLEREIDQ 162
Query: 234 LRAAVGKCPPGA-TSTSS---CSAGNDQENRSS-LDFYTGIFGIDKSRIMELVNQGMEEL 288
+ P STS S+ N N + LDF G +K + L N + L
Sbjct: 163 FNSRYLSHPKQRMVSTSEQAPSSSSNPGINATPVLDFSGGTRTSEKETSIFL-NLAITAL 221
Query: 289 KKMATAGG---PLW-IRSLETGREILN-YDEYVKEFSAENSSNGKSNRSIEASRDAGVVF 343
+++ T G P W I + + + Y++Y F N+ + +EASR G+V
Sbjct: 222 RELITLGEVDCPFWMIDPIVRSKGVSKIYEKYRSSF---NNVTKPPGQIVEASRAKGLVP 278
Query: 344 VDLPKLVQSFTDVNQWKAMFPCLISKAATVDVICGGEGPNRNGAVQLMFAELQMLTPMVP 403
+ LV++ D +W +F ++ A+T V+ G G ++G++Q + AE Q+++P+VP
Sbjct: 279 MTCVTLVKTLMDTGKWVNVFAPIVPVASTHKVLSTGSGGTKSGSLQQIQAEFQVISPLVP 338
Query: 404 TREVYFVRYCKQLSAEQWAIVDVSIDKVEENIDASLAKCRKR-PSGCIVEDKSNGHCKVT 462
R+V F+RYCK++ W +VDV+ +N C KR PSG I++D SNG+ +VT
Sbjct: 339 KRKVTFIRYCKEIRQGLWVVVDVT---PTQNPTLLPYGCSKRLPSGLIIDDLSNGYSQVT 395
Query: 463 WVEHLECQKGTVHTMYRSIVSSGLAFGARHWMTTLQLQCERLVFFMATNVPTKDSSGVAT 522
W+E E + +H +Y+ ++ G+ GA+ W+ TLQ CE L +TN+ T+ S G++
Sbjct: 396 WIEQAEYNESHIHQLYQPLIGYGIGLGAKRWLATLQRHCESLSTLSSTNL-TEISPGLSA 454
Query: 523 LAGRKSILKLAQRMTWSFCRAIGASSYHVWNKV-TSKTGEDIRVSSRKNLNDPGEPLGVI 581
G I+KLAQRMT ++ R I + S W K+ +++ RKN+N+PGE G++
Sbjct: 455 -KGATEIVKLAQRMTLNYYRGITSPSVDKWQKIQVENVAQNMSFMIRKNVNEPGELTGIV 513
Query: 582 LCAVSSVWLPVSPNVLFDFLRDEAHRNEWDIMSNGGPVQTIANLAKGQDRGNAVNIQTMK 641
L A +SVWLPV+ + LF F+ + R+EWDI++N ++ + K + GN +++ +K
Sbjct: 514 LSASTSVWLPVNQHTLFAFISHLSFRHEWDILTNDTTMEETIRIQKAKRHGNIISL--LK 571
Query: 642 SKENSMWLLQDSYTNAYESMVVYAPVDITGMQSVITGCDSSNIAILPSGFSILPDGLESR 701
N M +LQ+ + +A +MVVYAPV+ ++ V G +S ++ LPSGFSI+PDG
Sbjct: 572 IVNNGMLVLQEIWNDASGAMVVYAPVETNSIELVKRGENSDSVKFLPSGFSIVPDG---- 627
Query: 702 PLVITSRQEEKITEGGSLLSIAFQILTNNSPAAKLTMESVDSVNTLISCTLRNIKTSLQC 761
+ T GG LL+ QIL +P A L +V SV TL++ T+ IK++L
Sbjct: 628 ---VNGSYHRGNTGGGCLLTFGLQILVGINPTAALIQGTVKSVETLMAHTIVKIKSALDL 684
Query: 762 E 762
+
Sbjct: 685 Q 685
>TAIR|locus:2023932 [details] [associations]
symbol:HDG10 "AT1G34650" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 INTERPRO:IPR002913
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:3.30.530.20 InterPro:IPR023393 Pfam:PF01852 SMART:SM00234
PROSITE:PS50848 HOGENOM:HOG000243256 EMBL:AC007894 EMBL:AC023279
IPI:IPI00526139 PIR:B86470 RefSeq:NP_174724.1 UniGene:At.51941
ProteinModelPortal:Q9S9Z0 SMR:Q9S9Z0 EnsemblPlants:AT1G34650.1
GeneID:840369 KEGG:ath:AT1G34650 TAIR:At1g34650 InParanoid:Q9S9Z0
PhylomeDB:Q9S9Z0 ProtClustDB:CLSN2679643 Genevestigator:Q9S9Z0
Uniprot:Q9S9Z0
Length = 708
Score = 715 (256.8 bits), Expect = 1.8e-95, Sum P(2) = 1.8e-95
Identities = 170/510 (33%), Positives = 273/510 (53%)
Query: 263 LDFYTGIFGIDKSRIMELVNQGMEELKKMATAGGPLWIRSLETGREILNYDEYVKEFSAE 322
L + + ++K+R+ E+ + E+ + +WI+S GR I++ Y + F+
Sbjct: 211 LQHFQQLSQLEKNRMFEIAKNAVAEVMSLIQMEHSMWIKSTIDGRAIIDPGNYKRYFTKN 270
Query: 323 NSSNGKS--NRSIEASRDAGVVFVDLPKLVQSFTDVNQWKAMFPCLISKAATVDVICGGE 380
+ +S E+S + VV +D LV F + +W +FP ++++A T+ V+ +
Sbjct: 271 SHLKSRSALQSHHESSMEVVVVQMDARNLVDMFLNTEKWARLFPTIVTEAKTIHVLDSMD 330
Query: 381 GPNRNGAVQLMFAELQMLTPMVPTREVYFVRYCKQLSAEQWAIVDVSIDKVEENIDASLA 440
P + + ++++ +L +L+P+V RE +R C+Q+ + W I DVS +++
Sbjct: 331 HPRQTFS-RVVYEQLHILSPLVLPREFIILRTCQQMKEDLWLIADVSCYLQNVEFESTAP 389
Query: 441 KCRKRPSGCIVEDKSNGHCKVTWVEHLEC-QKGTVHTMYRSIVSSGLAFGARHWMTTLQL 499
C KRPSG +++ +G KVTW+EH+E K H +YR ++ G +GAR W TLQ
Sbjct: 390 ICTKRPSGVLIQALPHGRSKVTWIEHVEVTDKVWPHQLYRDLLYGGFGYGARRWTATLQR 449
Query: 500 QCERLVFFMATNVPTKDSSGVA-TLAGRKSILKLAQRMTWSFCRAIGASSYHVWNKVTSK 558
CERL + T+ P D GV T+ GR+S++ L +RM +F + S + +
Sbjct: 450 MCERLSLYSMTDFPPTDYPGVVKTIEGRRSVMSLGERMLKNFAWIMKMSDKLDLPQQSGA 509
Query: 559 TGEDIRVSSRKNLNDPGEPLGVILCAVSSVWLPVSPNVLFDFLRDEAHRNEWDIMSNGGP 618
+R+S R N + G+P G+I+CA SS+ LP+ P ++DFLR+ R++WD+ G P
Sbjct: 510 NNSGVRISVRTN-TEAGQPPGLIVCAGSSLSLPLPPLQVYDFLRNLEVRHQWDVHCQGNP 568
Query: 619 VQTIANLAKGQDRGNAVN-IQTMKSKENSMWLLQDSYTNAYESMVVYAPVDITGMQSVIT 677
V A G D+ N V +Q E + +LQD + +A MVVYAP+++ S I+
Sbjct: 569 VTEAARFVTGPDQKNNVTFLQPSSVGEYKLMILQDGFIDALGGMVVYAPMNLNTAYSAIS 628
Query: 678 G-CDSSNIAILPSGFSILPDGLESRPLVITSRQEEKITEGGS--LLSIAFQI-LTNNSPA 733
G D S I ILPSGF I D S P S E +GGS LL++AFQI +T S
Sbjct: 629 GQVDPSTIPILPSGFIISRD---SHP----SSSE---VDGGSMTLLTLAFQIFVTGPSYY 678
Query: 734 AKLTM-ESVDSVNTLISCTLRNIKTSLQCE 762
L + +S +VNTL+S ++ IK L CE
Sbjct: 679 TDLNLKDSATTVNTLVSSAVQRIKAMLNCE 708
Score = 254 (94.5 bits), Expect = 1.8e-95, Sum P(2) = 1.8e-95
Identities = 57/147 (38%), Positives = 83/147 (56%)
Query: 116 HTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENSL 175
H+ Q++ +EA F E PHPD+ QR+QL +L L +Q+KFWFQNRRTQ + E+ +N
Sbjct: 23 HSNHQVQRLEAFFHECPHPDDSQRRQLGNELNLKHKQIKFWFQNRRTQARIHNEKADNIA 82
Query: 176 LKSEIEKLREENKAMREAINKACCPNCGMATTSRDTSMTTEEQQLRIENARLKAEVEKLR 235
L+ E K+R N+AM +A+ CP CG ++ + Q+LR +N LK E E+L
Sbjct: 83 LRVENMKIRCVNEAMEKALETVLCPPCG-GPHGKEEQLCNL-QKLRTKNVILKTEYERLS 140
Query: 236 AAVGKCPPGATSTSSCSAGNDQENRSS 262
+ + K G S S A D S+
Sbjct: 141 SYLTK--HGGYSIPSVDALPDLHGPST 165
>TAIR|locus:2145116 [details] [associations]
symbol:HDG7 "AT5G52170" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;IDA] [GO:0006473 "protein acetylation" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 INTERPRO:IPR002913 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 Pfam:PF01852
SMART:SM00234 PROSITE:PS50848 eggNOG:euNOG18333
HOGENOM:HOG000243256 HSSP:Q6B2C0 EMBL:AB025603 IPI:IPI00525258
RefSeq:NP_200030.1 UniGene:At.55500 ProteinModelPortal:Q9LTK3
SMR:Q9LTK3 EnsemblPlants:AT5G52170.1 GeneID:835293
KEGG:ath:AT5G52170 TAIR:At5g52170 InParanoid:Q9LTK3
PhylomeDB:Q9LTK3 Genevestigator:Q9LTK3 Uniprot:Q9LTK3
Length = 682
Score = 901 (322.2 bits), Expect = 2.5e-90, P = 2.5e-90
Identities = 229/652 (35%), Positives = 352/652 (53%)
Query: 136 EKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENSLLKSEI-EKLREENKAMREAI 194
++QR + K+ R + Q + K H N + E+ +KL E+K ++
Sbjct: 48 QEQRPKKKKRKTKYHRHTSYQIQELESFFKECP--HPNEKQRLELGKKLTLESKQIKFWF 105
Query: 195 NKACCPNCGMATTSRDTSMTTEEQQLRIENARLKAEVEKLRAAVGKCPPGATSTSSCSAG 254
+ + E ++LR+EN+ LK E +R ++ GA S
Sbjct: 106 QNRRTQMKTQLERHENVILKQENEKLRLENSFLK---ESMRGSLCIDCGGAVIPGEVSFE 162
Query: 255 NDQ---EN---RSSLDFYTGIFG--IDKSRIMELVNQG---MEELK--KMATAGGPLWIR 301
Q EN + LD + I S +E + G + L + G L
Sbjct: 163 QHQLRIENAKLKEELDRICALANRFIGGSISLEQPSNGGIGSQHLPIGHCVSGGTSLMFM 222
Query: 302 SL--ETGREILNYDEYVKEFSAENSSNGKSNRSIEASRDAGVVFVDLPKLVQSFTDVNQW 359
L E E+L E + S G N SR+ G+V ++ LV++ D N+W
Sbjct: 223 DLAMEAMDELLKLAELETSLWSSKSEKGSMNH-FPGSRETGLVLINSLALVETLMDTNKW 281
Query: 360 KAMFPCLISKAATVDVICGGEGPNRNGAVQLMFAELQMLTPMVPTREVYFVRYCKQLSAE 419
MF C+++ A+T++VI G +RNG++ LM AE Q+++P+VP ++ F+RYCKQ
Sbjct: 282 AEMFECIVAVASTLEVISNGSDGSRNGSILLMQAEFQVMSPLVPIKQKKFLRYCKQHGDG 341
Query: 420 QWAIVDVSID--KVEENIDASLAKCRKRPSGCIVEDKSNGHCKVTWVEHLECQKGTVHTM 477
WA+VDVS D + EN+ S + PSGCI++D NG KVTW+EH E ++ H++
Sbjct: 342 LWAVVDVSYDINRGNENLK-SYGGSKMFPSGCIIQDIGNGCSKVTWIEHSEYEESHTHSL 400
Query: 478 YRSIVSSGLAFGARHWMTTLQLQCERLVFFMATNVPTKDSSGVATLAGRKSILKLAQRMT 537
Y+ ++SS + GA W+ TLQ QCE +++ +D +G++ AG KSILKLAQRM
Sbjct: 401 YQPLLSSSVGLGATKWLATLQRQCESFTMLLSS----EDHTGLSH-AGTKSILKLAQRMK 455
Query: 538 WSFCRAIGASSYHVWNKVTSKT-GEDIRVSSRKNLNDPGEPLGVILCAVSSVWLPVSPNV 596
+F I AS H W K+ ++ G+D R+ +RK+L EP G++L A +S+WLPV+
Sbjct: 456 LNFYSGITASCIHKWEKLLAENVGQDTRILTRKSL----EPSGIVLSAATSLWLPVTQQR 511
Query: 597 LFDFLRDEAHRNEWDIMSNGGPVQTIANLAKGQDRGNAVNIQTMKSK---ENSMWLLQDS 653
LF+FL D RN+WDI+SNG ++ + KGQ G+ V++ E+SM +LQ++
Sbjct: 512 LFEFLCDGKCRNQWDILSNGASMENTLLVPKGQQEGSCVSLLRAAGNDQNESSMLILQET 571
Query: 654 YTNAYESMVVYAPVDITGMQSVITGCDSSNIAILPSGFSILPDGLESRPLVITS-----R 708
+ + ++VVYAPVDI M +V++G DS+ +A+LPSGFSILPDG S +
Sbjct: 572 WNDVSGALVVYAPVDIPSMNTVMSGGDSAYVALLPSGFSILPDGSSSSSDQFDTDGGLVN 631
Query: 709 QEEKITEGGSLLSIAFQILTNNSPAAKLTMESVDSVNTLISCTLRNIKTSLQ 760
QE K G LL++ FQIL N+ P AKL +ESV++VN LI+CT+ I+ +L+
Sbjct: 632 QESK----GCLLTVGFQILVNSLPTAKLNVESVETVNNLIACTIHKIRAALR 679
Score = 388 (141.6 bits), Expect = 5.1e-33, P = 5.1e-33
Identities = 84/194 (43%), Positives = 116/194 (59%)
Query: 113 YHRHTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHE 172
YHRHT+ QI+E+E+ FKE PHP+EKQR +L K+L L +Q+KFWFQNRRTQ+KT ERHE
Sbjct: 61 YHRHTSYQIQELESFFKECPHPNEKQRLELGKKLTLESKQIKFWFQNRRTQMKTQLERHE 120
Query: 173 NSLLKSEIEKLREENKAMREAINKACCPNCGMATTSRDTSMTTEEQQLRIENARLKAEVE 232
N +LK E EKLR EN ++E++ + C +CG A + S E+ QLRIENA+LK E++
Sbjct: 121 NVILKQENEKLRLENSFLKESMRGSLCIDCGGAVIPGEVSF--EQHQLRIENAKLKEELD 178
Query: 233 KLRAAVGKCPPGATSTSSCSAGNDQENRSSLDFYTGIFGIDKSRIMELVNQGMEELKKMA 292
++ A + G+ S S G + + G M+L + M+EL K+A
Sbjct: 179 RICALANRFIGGSISLEQPSNGGIGSQHLPIGHC--VSGGTSLMFMDLAMEAMDELLKLA 236
Query: 293 TAGGPLWIRSLETG 306
LW E G
Sbjct: 237 ELETSLWSSKSEKG 250
>TAIR|locus:2129396 [details] [associations]
symbol:HDG4 "AT4G17710" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006944 "cellular membrane fusion" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
EMBL:AL161547 Gene3D:1.10.10.60 SUPFAM:SSF46689 Pfam:PF01852
SMART:SM00234 PROSITE:PS50848 HOGENOM:HOG000243256 KO:K09338
HSSP:Q6B2C0 EMBL:Z97344 eggNOG:NOG264325 EMBL:AY133700
IPI:IPI00546205 PIR:B71447 RefSeq:NP_193506.2 UniGene:At.32974
ProteinModelPortal:Q8L7H4 SMR:Q8L7H4 IntAct:Q8L7H4 PaxDb:Q8L7H4
PRIDE:Q8L7H4 EnsemblPlants:AT4G17710.1 GeneID:827492
KEGG:ath:AT4G17710 TAIR:At4g17710 InParanoid:Q8L7H4
PhylomeDB:Q8L7H4 Genevestigator:Q8L7H4 Uniprot:Q8L7H4
Length = 709
Score = 742 (266.3 bits), Expect = 1.7e-73, P = 1.7e-73
Identities = 201/610 (32%), Positives = 325/610 (53%)
Query: 163 QIKTIQERHENSLLKSEIEKLREENKAMR-EAINKACCPNCGMATTSRDTSMTTEEQQLR 221
Q K Q + + S +S+ KL+ EN+ ++ E+ N C +T LR
Sbjct: 137 QNKRTQIKAQQS--RSDNAKLKAENETLKTESQNIQSNFQCLFCSTCG--------HNLR 186
Query: 222 IENARLKAEVEKLRAAVGKCPPGATSTSSCSAGNDQENRSSLDFYTGIFGIDKSRIMELV 281
+ENARL+ E+++LR+ V P + S N N + L I +K+ MEL
Sbjct: 187 LENARLRQELDRLRSIVSMRNP-SPSQEITPETNKNNNDNML-----IAEEEKAIDMELA 240
Query: 282 NQGMEELKKMATAGGPLWIRS-LETGREILNYDEYVKEFSAENSSNGKSNRSIEASRDAG 340
EL KM PLW + L+ LN +EY K F ++ R EASR
Sbjct: 241 VSCARELAKMCDINEPLWNKKRLDNESVCLNEEEYKKMFLWPLMNDDDRFRR-EASRANA 299
Query: 341 VVFVDLPKLVQSFTDVNQWKAMFPCLISKAATVDVICGG-EGPNRNGAVQLMFAELQMLT 399
V+ ++ LV++F D ++W MF ++S A T +I G GP+ G + LMFAELQ+++
Sbjct: 300 VIMLNCITLVKAFLDADKWSEMFFPIVSSAKTAQIISSGASGPS--GTLLLMFAELQVVS 357
Query: 400 PMVPTREVYFVRYCKQLSAE-QWAIVDVSIDKVEENIDASLAKCRKRPSGCIVEDKSNGH 458
P+VPTRE YF+RY +Q + E +W +VD ID+++ + + R++PSGCI++ NG+
Sbjct: 358 PLVPTREAYFLRYVEQNAEEGKWMVVDFPIDRIKPASATTTDQYRRKPSGCIIQAMRNGY 417
Query: 459 CKVTWVEHLECQKGTVHT-MYRSIVSSGLAFGARHWMTTLQLQCERLVFFMATNVPTKDS 517
+VTWVEH+E ++ V + R V SG+AFGA W++ L+ QCER+ MATN+ D
Sbjct: 418 SQVTWVEHVEVEEKHVQDEVVREFVESGVAFGAERWLSVLKRQCERMASLMATNIT--DL 475
Query: 518 SGVATLAGRKSILKLAQRMTWSFCRAIGASSYHVWNKVTSKTGEDIRVSSRKNLNDPGEP 577
+ ++ RK+++KL+QRM +FC I +S+ + T + +++ SRK
Sbjct: 476 GVIPSVEARKNLMKLSQRMVKTFCLNI-INSHG-----QAPTKDTVKIVSRKVCG----- 524
Query: 578 LGVILCAVSSVWLPVSPNVLFDFLRDEAHRNEWDIMSNGGPVQTIANLAKGQDRGNAVNI 637
G++ CAVS LP S +FD LRD ++ +I+ G Q +A++A G GN++++
Sbjct: 525 -GLVPCAVSVTLLPYSHQQVFDLLRDNQRLSQLEILFMGSSFQEVAHIANGSHLGNSISL 583
Query: 638 QTMKSKENSMW----LLQDSYTNAYESMVVYAPVDITGMQSVITGCDSSNIAILPSGFSI 693
+ + NS +LQ++ T+ S++VY+ VD +Q + G D S I +LP GFS+
Sbjct: 584 LRINVESNSSHNVELMLQETCTDNSGSLLVYSTVDPVAVQLAMNGEDPSEIPLLPVGFSV 643
Query: 694 LP----DGLESRPLVITSRQEEKITEGGSLLSIAFQILTNNSPAAKLTMESVDSVNTLIS 749
+P DG+E ++ LL++A Q+L +N +L + +V +N I
Sbjct: 644 VPVNPSDGVEG----------SSVSSPSCLLTVAIQVLGSNVTTERLDLSTVSVINHRIC 693
Query: 750 CTLRNIKTSL 759
T+ I ++L
Sbjct: 694 ATVNRITSAL 703
Score = 300 (110.7 bits), Expect = 3.4e-23, P = 3.4e-23
Identities = 66/148 (44%), Positives = 91/148 (61%)
Query: 113 YHRHTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHE 172
YHRHTA QI++MEALFKE+ HPD K R +LSK+LGL+P QVKFWFQN+RTQIK Q R +
Sbjct: 92 YHRHTASQIQQMEALFKENAHPDTKTRLRLSKKLGLSPIQVKFWFQNKRTQIKAQQSRSD 151
Query: 173 NSLLKSEIEKLREENKAMREAINKACCPNCGMATTSRDTSMTTEEQQLRIENARLKAEVE 232
N+ LK+E E L+ E++ ++ C CG LR+ENARL+ E++
Sbjct: 152 NAKLKAENETLKTESQNIQSNFQCLFCSTCG--------------HNLRLENARLRQELD 197
Query: 233 KLRAAVGKCPPGATSTSSCSAG-NDQEN 259
+LR+ V P + + N+ +N
Sbjct: 198 RLRSIVSMRNPSPSQEITPETNKNNNDN 225
>TAIR|locus:2182850 [details] [associations]
symbol:AT5G07260 "AT5G07260" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0006944 "cellular membrane fusion" evidence=RCA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA] INTERPRO:IPR002913 EMBL:CP002688
GenomeReviews:BA000015_GR Pfam:PF01852 PROSITE:PS50848
EMBL:BT003974 EMBL:BT005131 IPI:IPI00531581 RefSeq:NP_196343.2
UniGene:At.23335 ProteinModelPortal:Q84JD1 PaxDb:Q84JD1
EnsemblPlants:AT5G07260.1 GeneID:830617 KEGG:ath:AT5G07260
TAIR:At5g07260 HOGENOM:HOG000147055 InParanoid:Q84JD1
PhylomeDB:Q84JD1 ProtClustDB:CLSN2686056 ArrayExpress:Q84JD1
Genevestigator:Q84JD1 Uniprot:Q84JD1
Length = 541
Score = 290 (107.1 bits), Expect = 4.5e-26, Sum P(2) = 4.5e-26
Identities = 93/403 (23%), Positives = 189/403 (46%)
Query: 310 LNYDEYVKEFSAENSSNGKSNRSIEASRDAGVVFVDLPKLVQSFTDVNQWKAMFPCLISK 369
LN DEY + + N E SR + V D LV + + W+ +FP +I
Sbjct: 120 LNLDEYYSKLFPWYARNAPGFVH-EVSRASAFVPCDASSLVANLMNHVSWQKIFPSII-- 176
Query: 370 AATVDVICGGEGPNRNGAVQLMFAELQMLTPMVPTREVYFVRYCKQLSAEQWAIVDVSID 429
A V V E R G ++ + ++P++ TR V +R + + + WAI ++S+
Sbjct: 177 -ADVSV----ESQQR-GLQKINVNFMPQISPLIQTRNVKLLRRSRHIEDDTWAIAEISM- 229
Query: 430 KVEENIDASLAKCRKRPSGCIVEDKSNGHCKVTWVEH-LECQKGTVHTMYRSIVSSGLAF 488
+ + PSG +++ +NG KVT ++H + ++ ++T +S F
Sbjct: 230 YFSSYAQHLRPEYMRFPSGYLIQHIANGISKVTILDHWVYKEEEGMNTF-----NSNSEF 284
Query: 489 GARHWMTTLQLQCERLVFFMATNVPTKDSS-GVATLAGRKSILKLAQRMTWSFCRAIGAS 547
GA+ W+T LQ + ++P+ + + RK++L L+ M FC +
Sbjct: 285 GAQRWLTALQ---KHYYNTCPVSIPSIGHNIQIFDQICRKNLLNLSSFMVNVFCSGVCGI 341
Query: 548 SYHVWNKVTSK--TGEDIRVSSRKNLNDPGEPLGVILCAVSSVWLPVSPNVLFDFLRDEA 605
+ WN++ + + +IR+ ++++ G P V++ A + P V+F +
Sbjct: 342 TGQRWNRLNTVGVSANNIRMFTQESRGMSGIPC-VLVSATGLARMHTKPEVMFGLINGAE 400
Query: 606 HRNEWDIMSNGGPVQTIANLAKGQDRGNAVNIQTMKSKENSMW-LLQDSYTNAYESMVVY 664
+ W + + ++ + + + + N V++ +++ K + W L+Q++Y + +M+++
Sbjct: 401 KQEIWSYLESAKDMKELIRIGRHPNSWNEVSVFSIEWKGSKEWYLIQETYYDESGAMIIH 460
Query: 665 APVDITGMQSVITGCDSSNIAILPSGFSILPDGLESRPLVITS 707
V+ + I G D S + +LPSGF+I+P ES+ +T+
Sbjct: 461 TCVEAPYFAAAINGGDLSGVELLPSGFTIIP--CESQECFVTA 501
Score = 79 (32.9 bits), Expect = 4.5e-26, Sum P(2) = 4.5e-26
Identities = 20/60 (33%), Positives = 36/60 (60%)
Query: 176 LKSEIEKLREENKAMREAINK-ACCPNCGMATTSRDTSMTTEEQQLRIENARLKAEVEKL 234
L + + LR EN+A A+ + C +C + ++TEE++L +ENARL++E++ L
Sbjct: 11 LHQQNDLLRAENRARIHAMTSPSICRSC------EEPIISTEERELWLENARLRSEIDTL 64
>TAIR|locus:2116442 [details] [associations]
symbol:AT4G26920 "AT4G26920" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] INTERPRO:IPR002913 EMBL:CP002687
GenomeReviews:CT486007_GR EMBL:AL161566 GO:GO:0003677 Pfam:PF01852
PROSITE:PS50848 HOGENOM:HOG000147055 IPI:IPI00519973 PIR:D85312
RefSeq:NP_194422.1 UniGene:At.54524 ProteinModelPortal:Q9M0J8
STRING:Q9M0J8 PaxDb:Q9M0J8 PRIDE:Q9M0J8 EnsemblPlants:AT4G26920.1
GeneID:828799 KEGG:ath:AT4G26920 TAIR:At4g26920 eggNOG:NOG311290
OMA:WIIADIS PhylomeDB:Q9M0J8 ArrayExpress:Q9M0J8
Genevestigator:Q9M0J8 Uniprot:Q9M0J8
Length = 461
Score = 167 (63.8 bits), Expect = 3.5e-18, Sum P(3) = 3.5e-18
Identities = 54/194 (27%), Positives = 93/194 (47%)
Query: 263 LDFYTGIFGIDKSRIMEL---VNQGMEELKKMATAGGPLWIRSLETGREILNYDEYVKEF 319
LDF+ F S ++ L + + E+ +AT PLW RS E+L +EY F
Sbjct: 47 LDFWRNQFPNVSSYLLNLWVVLACIVNEIIALATLESPLWRRSQR--EEMLTLNEYYSRF 104
Query: 320 SAENSSNGKSNRSI-EASRDAGVVFVDLPKLVQSFTDVNQWKAMFPCLISKAATVDVICG 378
+ N R + EASR + V+ VD L+ + +W +FP L+ +
Sbjct: 105 FPWYAKNVP--RFVHEASRASEVIHVDASWLLTKLKNPMRWVTIFPSLVGNVSI------ 156
Query: 379 GEGPNRNGAVQLMFAELQMLTPMVPTREVYFVRYCKQLSAEQWAIVDVSIDKVEENIDAS 438
E N + + + L ++TP++PTR+V +RYC +++ + W I D+S+ + D
Sbjct: 157 -ESSNDDVRMIIDMEFLTLITPVIPTRKVKVLRYCHRIANDTWIIADISM-YLSSYSDDL 214
Query: 439 LAKCRKRPSGCIVE 452
+ + PSG I++
Sbjct: 215 RPEFLRFPSGFIIK 228
Score = 134 (52.2 bits), Expect = 3.5e-18, Sum P(3) = 3.5e-18
Identities = 42/182 (23%), Positives = 88/182 (48%)
Query: 520 VATLAGRKSILKLAQRMTWSFCRAIGASSYHVWNKVTSKTGEDIRVSSRKNLNDPGEPLG 579
V AG+ ++L+ ++R+ FC + + + D+RVSS ++ + P G
Sbjct: 236 VTNSAGKNNLLQASKRLVHIFCSGTCGVIGNRGRWLGAGRRFDVRVSSLESRDMIRHPYG 295
Query: 580 VILCAVSSVWLPVSPNVLFDFL----RDEAHRNEWDIMSNGGPVQTIANLAKGQDRG-NA 634
+I A + P +LF + + E H + + +G ++ + + + N
Sbjct: 296 II-SASGLTKIHAKPEILFPLIYGVKKLEIHNH---LRLSGNDLKQVLRITRDDITSRND 351
Query: 635 VNIQTMK-SKENSMWLLQDSYTNAYESMVVYAPVDITGMQSVITGCDSSNIAILPSGFSI 693
V++ + + + ++LLQ++Y A SMV+++ +D++ + +I G D S P GF+I
Sbjct: 352 VSLFSFRLNNSTEVFLLQEAYNEASSSMVIHSILDVSSLAKIING-DRSYSFTYPCGFTI 410
Query: 694 LP 695
+P
Sbjct: 411 MP 412
Score = 41 (19.5 bits), Expect = 3.5e-18, Sum P(3) = 3.5e-18
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 211 TSMTTEEQQLRIENARLKAEVEKLRA 236
T + +E +L+ ENA +++ E L A
Sbjct: 17 TEILSEANELQFENAVSRSDNETLNA 42
>TAIR|locus:2175856 [details] [associations]
symbol:REV "AT5G60690" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0008289 "lipid binding" evidence=ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IMP] [GO:0010014
"meristem initiation" evidence=RCA;IMP] [GO:0009956 "radial pattern
formation" evidence=IMP] [GO:0010051 "xylem and phloem pattern
formation" evidence=RCA;IMP] [GO:0009855 "determination of
bilateral symmetry" evidence=RCA;IMP] [GO:0009944 "polarity
specification of adaxial/abaxial axis" evidence=RCA;IMP]
[GO:0007155 "cell adhesion" evidence=RCA] [GO:0009887 "organ
morphogenesis" evidence=RCA] [GO:0009965 "leaf morphogenesis"
evidence=RCA] [GO:0010072 "primary shoot apical meristem
specification" evidence=RCA] [GO:0010073 "meristem maintenance"
evidence=RCA] [GO:0010075 "regulation of meristem growth"
evidence=RCA] [GO:0010090 "trichome morphogenesis" evidence=RCA]
[GO:0016049 "cell growth" evidence=RCA] [GO:0045010 "actin
nucleation" evidence=RCA] [GO:0045595 "regulation of cell
differentiation" evidence=RCA] [GO:0048439 "flower morphogenesis"
evidence=RCA] [GO:0048519 "negative regulation of biological
process" evidence=RCA] [GO:0048589 "developmental growth"
evidence=RCA] [GO:0048765 "root hair cell differentiation"
evidence=RCA] [GO:0071555 "cell wall organization" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 INTERPRO:IPR002913 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0030154 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 EMBL:AB005246 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:3.30.530.20 InterPro:IPR023393 Pfam:PF01852
SMART:SM00234 PROSITE:PS50848 GO:GO:0010051 GO:GO:0009855
GO:GO:0009944 KO:K09338 HSSP:P10037 ProtClustDB:CLSN2679470
InterPro:IPR013978 Pfam:PF08670 GO:GO:0009956 GO:GO:0010014
EMBL:AF188994 EMBL:AY170127 EMBL:AF233592 EMBL:AK229564
EMBL:EF598684 EMBL:EF598685 EMBL:EF598686 EMBL:EF598687
EMBL:EF598688 EMBL:EF598689 EMBL:EF598690 EMBL:EF598691
EMBL:EF598692 EMBL:EF598693 EMBL:EF598694 EMBL:EF598695
EMBL:EF598696 EMBL:EF598697 EMBL:EF598698 EMBL:EF598699
EMBL:EF598700 EMBL:EF598701 EMBL:EF598702 EMBL:EF598703
EMBL:EF598704 EMBL:EF598705 EMBL:EF598706 IPI:IPI00531930
RefSeq:NP_200877.1 UniGene:At.49201 UniGene:At.7238
ProteinModelPortal:Q9SE43 SMR:Q9SE43 STRING:Q9SE43 PaxDb:Q9SE43
PRIDE:Q9SE43 EnsemblPlants:AT5G60690.1 GeneID:836190
KEGG:ath:AT5G60690 TAIR:At5g60690 eggNOG:NOG323815
InParanoid:Q9M5B6 OMA:TIELVYM PhylomeDB:Q9SE43
Genevestigator:Q9SE43 Uniprot:Q9SE43
Length = 842
Score = 155 (59.6 bits), Expect = 1.0e-17, Sum P(3) = 1.0e-17
Identities = 70/289 (24%), Positives = 127/289 (43%)
Query: 335 ASRDAGVVFVDLPKLVQSFTDVNQWKAMFPCLISKAATVDVICGGEGPNRNGAVQLMFAE 394
A+R G+V ++ K+ + D W C + T+ G G G ++L++ +
Sbjct: 206 AARACGLVSLEPMKIAEILKDRPSW--FRDCRSLEVFTM--FPAGNG----GTIELVYMQ 257
Query: 395 LQMLTPMVPTREVYFVRYCKQLSAEQWAIVDVSIDKVEENIDASLA----KCRKRPSGCI 450
T + P R+ + +RY L + + + S+ +A+ A + SG +
Sbjct: 258 TYAPTTLAPARDFWTLRYTTSLDNGSFVVCERSLSGSGAGPNAASASQFVRAEMLSSGYL 317
Query: 451 VEDKSNGHCKVTWVEHLECQKGTVHTMYRSIVSSGLAFGARHWMTTLQLQCERLVFFMAT 510
+ G + V+HL + +V + R + S + MT L+ R +
Sbjct: 318 IRPCDGGGSIIHIVDHLNLEAWSVPDVLRPLYESSKVVAQK--MTISALRYIRQL----- 370
Query: 511 NVPTKDSSGVATLA-GRK-SILK-LAQRMTWSFCRAIGASSYHVWNKVTSKTGEDI--RV 565
++S+G GR+ ++L+ +QR++ F A+ W+ + EDI +
Sbjct: 371 ---AQESNGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFGDDGWSTMHCDGAEDIIVAI 427
Query: 566 SSRKNLNDPGEPL---GVILCAVSSVWLP-VSPNVLFDFLRDEAHRNEW 610
+S K+LN+ L G +LCA +S+ L V P VL FLR+ HR+EW
Sbjct: 428 NSTKHLNNISNSLSFLGGVLCAKASMLLQNVPPAVLIRFLRE--HRSEW 474
Score = 153 (58.9 bits), Expect = 1.0e-17, Sum P(3) = 1.0e-17
Identities = 42/129 (32%), Positives = 66/129 (51%)
Query: 113 YHRHTAEQIREMEALFKESPHPDEKQRQQLSKQLGLA----PRQVKFWFQNRRTQIKTIQ 168
Y R+TAEQ+ +E ++ E P P +RQQL ++ + P+Q+K WFQNRR + K +
Sbjct: 26 YVRYTAEQVEALERVYAECPKPSSLRRQQLIRECSILANIEPKQIKVWFQNRRCRDKQRK 85
Query: 169 ERHE----NSLLKSEIEKLREENKAMREAINKACCPNCGM----ATTSRDTS----MTTE 216
E N L + + L EEN +++ +++ C N M T D S +TT
Sbjct: 86 EASRLQSVNRKLSAMNKLLMEENDRLQKQVSQLVCENGYMKQQLTTVVNDPSCESVVTTP 145
Query: 217 EQQLRIENA 225
+ LR N+
Sbjct: 146 QHSLRDANS 154
Score = 42 (19.8 bits), Expect = 1.0e-17, Sum P(3) = 1.0e-17
Identities = 24/88 (27%), Positives = 40/88 (45%)
Query: 672 MQSVITGCDSSNIAILPSGFS-ILPDGLE-SRPLVITSRQ--EEKITE--GGSLLSIAFQ 725
++SVI+ +AI PSG S L L P +T Q + + G LL+I
Sbjct: 658 VRSVISSVQRVAMAISPSGISPSLGSKLSPGSPEAVTLAQWISQSYSHHLGSELLTI--D 715
Query: 726 ILTNNSPAAKLTMESVDSVNTLISCTLR 753
L ++ KL + D++ + C+L+
Sbjct: 716 SLGSDDSVLKLLWDHQDAI---LCCSLK 740
Score = 37 (18.1 bits), Expect = 3.4e-17, Sum P(3) = 3.4e-17
Identities = 5/10 (50%), Positives = 9/10 (90%)
Query: 686 ILPSGFSILP 695
++PSGF ++P
Sbjct: 577 LVPSGFRVIP 586
>TAIR|locus:2134088 [details] [associations]
symbol:HB-8 "AT4G32880" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IMP] [GO:0010089 "xylem development"
evidence=RCA;IMP] [GO:0045597 "positive regulation of cell
differentiation" evidence=IMP] [GO:0009733 "response to auxin
stimulus" evidence=IEP] [GO:0010014 "meristem initiation"
evidence=RCA;IMP] [GO:0010072 "primary shoot apical meristem
specification" evidence=RCA;IMP] [GO:0010067 "procambium
histogenesis" evidence=IEP] [GO:0007062 "sister chromatid cohesion"
evidence=RCA] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0009793
"embryo development ending in seed dormancy" evidence=RCA]
[GO:0009855 "determination of bilateral symmetry" evidence=RCA]
[GO:0009880 "embryonic pattern specification" evidence=RCA]
[GO:0009887 "organ morphogenesis" evidence=RCA] [GO:0009888 "tissue
development" evidence=RCA] [GO:0009944 "polarity specification of
adaxial/abaxial axis" evidence=RCA] [GO:0010090 "trichome
morphogenesis" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0010431 "seed maturation" evidence=RCA] [GO:0010638 "positive
regulation of organelle organization" evidence=RCA] [GO:0016049
"cell growth" evidence=RCA] [GO:0033044 "regulation of chromosome
organization" evidence=RCA] [GO:0042546 "cell wall biogenesis"
evidence=RCA] [GO:0044036 "cell wall macromolecule metabolic
process" evidence=RCA] [GO:0045010 "actin nucleation" evidence=RCA]
[GO:0045595 "regulation of cell differentiation" evidence=RCA]
[GO:0048589 "developmental growth" evidence=RCA] [GO:0048765 "root
hair cell differentiation" evidence=RCA] [GO:0051301 "cell
division" evidence=RCA] [GO:0071555 "cell wall organization"
evidence=RCA] InterPro:IPR001356 InterPro:IPR004827
InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00338 SMART:SM00389 INTERPRO:IPR002913 GO:GO:0005634
GO:GO:0030154 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009733
GO:GO:0008284 GO:GO:0043565 GO:GO:0045597 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0010072
Gene3D:3.30.530.20 InterPro:IPR023393 Pfam:PF01852 SMART:SM00234
PROSITE:PS50848 GO:GO:0010089 KO:K09338 HSSP:P10037
HOGENOM:HOG000272677 ProtClustDB:CLSN2679470 InterPro:IPR013978
Pfam:PF08670 EMBL:AL161582 EMBL:Z50851 EMBL:AJ441292 EMBL:AY099631
EMBL:BT008798 IPI:IPI00546637 PIR:T10695 RefSeq:NP_195014.1
UniGene:At.31628 ProteinModelPortal:Q39123 SMR:Q39123 IntAct:Q39123
STRING:Q39123 PaxDb:Q39123 PRIDE:Q39123 EnsemblPlants:AT4G32880.1
GeneID:829424 KEGG:ath:AT4G32880 TAIR:At4g32880 eggNOG:NOG325934
InParanoid:Q39123 OMA:DAVMCCS PhylomeDB:Q39123
Genevestigator:Q39123 GO:GO:0010067 Uniprot:Q39123
Length = 833
Score = 145 (56.1 bits), Expect = 3.1e-16, Sum P(3) = 3.1e-16
Identities = 65/294 (22%), Positives = 126/294 (42%)
Query: 335 ASRDAGVVFVDLPKLVQSFTDVNQWKAMFPCLISKAATVDVICGGEGPNRNGAVQLMFAE 394
A+R G+V +D ++ + D PC + ++D++ N G ++L++ +
Sbjct: 205 AARACGLVGLDPTRVAEILKDK-------PCWLRDCRSLDIVNVLSTAN-GGTLELIYMQ 256
Query: 395 LQMLTPMVPTREVYFVRYCKQLSAEQWAIVDVSIDKVEE--NIDAS--LAKCRKRPSGCI 450
L T + P R+ + +RY + I + S++ + ++ S + PSG +
Sbjct: 257 LYAPTTLAPARDFWMLRYTSVMEDGSLVICERSLNNTQNGPSMPPSPHFVRAEILPSGYL 316
Query: 451 VEDKSNGHCKVTWVEHLECQKGTVHTMYRSIVSSGLAFGARHWMTTLQLQCERLVFFMAT 510
+ G + V+H + + +V + RS+ S R M L R + ++
Sbjct: 317 IRPCEGGGSILHIVDHFDLEPWSVPEVLRSLYESSTLLAQRTTMAAL-----RYLRQISQ 371
Query: 511 NVPTKDSSGVATLAGRKSILK-LAQRMTWSFCRAIGASSYHVWNKVTSKTGEDIRV---- 565
+ + +G R + L+ L+QR++ F A+ S W+ + S +D+ +
Sbjct: 372 EISQPNVTGWGR---RPAALRALSQRLSKGFNEAVNGFSDEGWSILESDGIDDVTLLVNS 428
Query: 566 SSRKNLNDPGEPLG--------VILCAVSSVWLP-VSPNVLFDFLRDEAHRNEW 610
S K + P +LCA +S+ L V P++L FLR+ HR EW
Sbjct: 429 SPTKMMMTSSLPFANGYTSMPSAVLCAKASMLLQNVPPSILLRFLRE--HRQEW 480
Score = 141 (54.7 bits), Expect = 3.1e-16, Sum P(3) = 3.1e-16
Identities = 32/84 (38%), Positives = 48/84 (57%)
Query: 113 YHRHTAEQIREMEALFKESPHPDEKQRQQLSKQL----GLAPRQVKFWFQNRRTQIKTIQ 168
Y R+T EQ+ +E L+ + P P +RQQL ++ + P+Q+K WFQNRR + K
Sbjct: 16 YVRYTPEQVEALERLYNDCPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK--- 72
Query: 169 ERHENSLLKSEIEKLREENKAMRE 192
+R E S L++ KL NK + E
Sbjct: 73 QRKEASRLQAVNRKLTAMNKLLME 96
Score = 50 (22.7 bits), Expect = 3.1e-16, Sum P(3) = 3.1e-16
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 656 NAYESM--VVYAPVDITGMQSVITGCDSSNIAILPSGFSILPDGLESR 701
NA ES +++AP+D + S + I+PSGF I+P L+S+
Sbjct: 559 NAVESCAELIFAPIDASF---------SDDAPIIPSGFRIIP--LDSK 595
>TAIR|locus:2028140 [details] [associations]
symbol:PHV "AT1G30490" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0009943 "adaxial/abaxial axis specification"
evidence=IMP] [GO:0009855 "determination of bilateral symmetry"
evidence=RCA;IMP] [GO:0009944 "polarity specification of
adaxial/abaxial axis" evidence=RCA;IMP] [GO:0010014 "meristem
initiation" evidence=RCA;IMP] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009880 "embryonic pattern
specification" evidence=IGI] [GO:0080060 "integument development"
evidence=IGI] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0010051
"xylem and phloem pattern formation" evidence=RCA] [GO:0010073
"meristem maintenance" evidence=RCA] [GO:0010075 "regulation of
meristem growth" evidence=RCA] [GO:0010090 "trichome morphogenesis"
evidence=RCA] [GO:0045010 "actin nucleation" evidence=RCA]
[GO:0048765 "root hair cell differentiation" evidence=RCA]
[GO:0071555 "cell wall organization" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 INTERPRO:IPR002913 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0030154 GO:GO:0003677
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 EMBL:AC009917
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0010072 Gene3D:3.30.530.20
InterPro:IPR023393 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
GO:GO:0009855 GO:GO:0009880 GO:GO:0009944 KO:K09338 HSSP:P10037
HOGENOM:HOG000272677 ProtClustDB:CLSN2679470 GO:GO:0080060
InterPro:IPR013978 Pfam:PF08670 EMBL:Y10922 EMBL:AJ440967
EMBL:AK221046 EMBL:AK226570 IPI:IPI00523245 PIR:H86429
RefSeq:NP_174337.1 UniGene:At.27961 UniGene:At.33151
ProteinModelPortal:O04292 SMR:O04292 IntAct:O04292 STRING:O04292
PRIDE:O04292 EnsemblPlants:AT1G30490.1 GeneID:839928
KEGG:ath:AT1G30490 TAIR:At1g30490 eggNOG:NOG326783
InParanoid:O04292 OMA:ICRSYRI PhylomeDB:O04292
Genevestigator:O04292 Uniprot:O04292
Length = 841
Score = 146 (56.5 bits), Expect = 4.1e-16, Sum P(3) = 4.1e-16
Identities = 72/295 (24%), Positives = 127/295 (43%)
Query: 335 ASRDAGVVFVDLPKLVQSFTDVNQWKAMFPCLISKAATVDVICGGEGPNRNGAVQLMFAE 394
A+R G+V ++ K+ + D W C+ T++VI G G G ++L+ +
Sbjct: 215 AARACGLVSLEPMKVAEILKDRPSWFRDCRCV----ETLNVIPTGNG----GTIELVNTQ 266
Query: 395 LQMLTPMVPTREVYFVRYCKQLSAEQWAIVDVSIDKVEEN----IDASLAKCRKRPSGCI 450
+ T + R+ + +RY L + + + S+ + +S + + SG +
Sbjct: 267 IYAPTTLAAARDFWTLRYSTSLEDGSYVVCERSLTSATGGPNGPLSSSFVRAKMLSSGFL 326
Query: 451 VEDKSNGHCKVTWVEHLECQKGTVHTMYRSIVSSGLAFGARHWMTTLQLQCERLVFFMAT 510
+ G + V+H++ +V + R + S + MT L+ R +
Sbjct: 327 IRPCDGGGSIIHIVDHVDLDVSSVPEVLRPLYESSKILAQK--MTVAALRHVRQI----- 379
Query: 511 NVPTKDSSG-VATLAGRK-SILK-LAQRMTWSFCRAIGASSYHVWNKVTSKTGEDIRV-- 565
+++SG V GR+ ++L+ +QR+ F A+ W+ ++S GEDI +
Sbjct: 380 ---AQETSGEVQYSGGRQPAVLRTFSQRLCRGFNDAVNGFVDDGWSPMSSDGGEDITIMI 436
Query: 566 --SSRKNLND-------PGEPLGVILCAVSSVWLP-VSPNVLFDFLRDEAHRNEW 610
SS K P GV LCA +S+ L V P VL FLR+ HR EW
Sbjct: 437 NSSSAKFAGSQYGSSFLPSFGSGV-LCAKASMLLQNVPPLVLIRFLRE--HRAEW 488
Score = 142 (55.0 bits), Expect = 4.1e-16, Sum P(3) = 4.1e-16
Identities = 32/84 (38%), Positives = 49/84 (58%)
Query: 113 YHRHTAEQIREMEALFKESPHPDEKQRQQLSKQL----GLAPRQVKFWFQNRRTQIKTIQ 168
Y R+T EQ+ +E ++ E P P +RQQL ++ + PRQ+K WFQNRR + K
Sbjct: 22 YVRYTPEQVEALERVYAECPKPSSLRRQQLIRECPILCNIEPRQIKVWFQNRRCREK--- 78
Query: 169 ERHENSLLKSEIEKLREENKAMRE 192
+R E++ L++ KL NK + E
Sbjct: 79 QRKESARLQTVNRKLSAMNKLLME 102
Score = 47 (21.6 bits), Expect = 4.1e-16, Sum P(3) = 4.1e-16
Identities = 29/115 (25%), Positives = 51/115 (44%)
Query: 660 SMVVYAPVDITGMQSVITGCDSSNIAILPSGFSILP-----------DGLESRPLVIT-- 706
+ +V+AP+D +S + + +LPSGF ++P +R L +
Sbjct: 574 AQLVFAPID----ESF-----ADDAPLLPSGFRVIPLDQKTNPNDHQSASRTRDLASSLD 624
Query: 707 -SRQEEKITEGGSLLSIAFQILTNNSPAAKLTMESVDSVNTLISCTLRNIKTSLQ 760
S + + T +L+IAFQ +N S D+V T+ +RN+ S+Q
Sbjct: 625 GSTKTDSETNSRLVLTIAFQFTFDN--------HSRDNVATMARQYVRNVVGSIQ 671
Score = 46 (21.3 bits), Expect = 2.0e-06, Sum P(3) = 2.0e-06
Identities = 17/66 (25%), Positives = 27/66 (40%)
Query: 159 NRRTQIKTIQERHENSLLKSEIEKLREENKAMREAINKACCPNCGMATTSRDTSMTTEEQ 218
NR+ EN L+ ++ L EN M+ I+ A G T + S+ Q
Sbjct: 90 NRKLSAMNKLLMEENDRLQKQVSNLVYENGFMKHRIHTAS----GTTTDNSCESVVVSGQ 145
Query: 219 QLRIEN 224
Q + +N
Sbjct: 146 QRQQQN 151
>TAIR|locus:2034086 [details] [associations]
symbol:ATHB-15 "AT1G52150" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;TAS] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0009965 "leaf morphogenesis" evidence=IMP]
[GO:0009855 "determination of bilateral symmetry" evidence=RCA;IMP]
[GO:0010014 "meristem initiation" evidence=RCA;IMP] [GO:0009887
"organ morphogenesis" evidence=RCA;IMP] [GO:0010073 "meristem
maintenance" evidence=RCA;TAS] [GO:0010075 "regulation of meristem
growth" evidence=RCA;IMP] [GO:0010087 "phloem or xylem
histogenesis" evidence=IMP] [GO:0048263 "determination of dorsal
identity" evidence=IMP] [GO:0080060 "integument development"
evidence=IGI] [GO:0006995 "cellular response to nitrogen
starvation" evidence=RCA] [GO:0007155 "cell adhesion" evidence=RCA]
[GO:0009944 "polarity specification of adaxial/abaxial axis"
evidence=RCA] [GO:0010051 "xylem and phloem pattern formation"
evidence=RCA] [GO:0010089 "xylem development" evidence=RCA]
[GO:0010090 "trichome morphogenesis" evidence=RCA] [GO:0045010
"actin nucleation" evidence=RCA] [GO:0048439 "flower morphogenesis"
evidence=RCA] [GO:0048519 "negative regulation of biological
process" evidence=RCA] [GO:0048765 "root hair cell differentiation"
evidence=RCA] [GO:0071555 "cell wall organization" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS50071
SMART:SM00389 INTERPRO:IPR002913 EMBL:CP002684 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:3.30.530.20 InterPro:IPR023393 Pfam:PF01852 SMART:SM00234
PROSITE:PS50848 GO:GO:0009965 GO:GO:0010087 KO:K09338
HOGENOM:HOG000272677 ProtClustDB:CLSN2679470 GO:GO:0080060
InterPro:IPR013978 Pfam:PF08670 GO:GO:0010075 GO:GO:0048263
EMBL:AC006216 GO:GO:0010014 IPI:IPI00545601 RefSeq:NP_849795.1
UniGene:At.11011 ProteinModelPortal:B3H4G8 SMR:B3H4G8 STRING:B3H4G8
PRIDE:B3H4G8 EnsemblPlants:AT1G52150.2 GeneID:841645
KEGG:ath:AT1G52150 OMA:EHVASMA Genevestigator:B3H4G8 Uniprot:B3H4G8
Length = 837
Score = 140 (54.3 bits), Expect = 1.5e-14, Sum P(3) = 1.5e-14
Identities = 60/246 (24%), Positives = 110/246 (44%)
Query: 382 PNRNGA-VQLMFAELQMLTPMVPTREVYFVRYCKQLSAEQWAIVDVSIDKVEENIDASLA 440
P NG V+L++ +L T + P R+ + +RY L + + S+ + L
Sbjct: 244 PTANGGTVELLYMQLYAPTTLAPPRDFWLLRYTSVLEDGSLVVCERSLKSTQNGPSMPLV 303
Query: 441 ----KCRKRPSGCIVEDKSNGHCKVTWVEHLECQKGTVHTMYRSIVSSGLAFGARHWMTT 496
+ SG ++ G + V+H++ + +V + R + S + M
Sbjct: 304 QNFVRAEMLSSGYLIRPCDGGGSIIHIVDHMDLEACSVPEVLRPLYESPKVLAQKTTMAA 363
Query: 497 LQLQCERLVFFMATNVPTKDSSGVATLAGRKSILK-LAQRMTWSFCRAIGASSYHVWNKV 555
L+ Q +++ A V T+ +S V R + L+ L+QR++ F A+ + W+ +
Sbjct: 364 LR-QLKQI----AQEV-TQTNSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWSVI 417
Query: 556 TSKTGE-DIRVSSRKN----LN----DPGEPLG-VILCAVSSVWLP-VSPNVLFDFLRDE 604
+ I V+S + LN + P+ V+LCA +S+ L V P +L FLR+
Sbjct: 418 GDSMDDVTITVNSSPDKLMGLNLTFANGFAPVSNVVLCAKASMLLQNVPPAILLRFLRE- 476
Query: 605 AHRNEW 610
HR+EW
Sbjct: 477 -HRSEW 481
Score = 138 (53.6 bits), Expect = 1.5e-14, Sum P(3) = 1.5e-14
Identities = 32/84 (38%), Positives = 48/84 (57%)
Query: 113 YHRHTAEQIREMEALFKESPHPDEKQRQQLSKQL----GLAPRQVKFWFQNRRTQIKTIQ 168
Y R+T EQ+ +E L+ + P P +RQQL ++ + P+Q+K WFQNRR + K
Sbjct: 18 YVRYTPEQVEALERLYHDCPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK--- 74
Query: 169 ERHENSLLKSEIEKLREENKAMRE 192
+R E S L++ KL NK + E
Sbjct: 75 QRKEASRLQAVNRKLTAMNKLLME 98
Score = 52 (23.4 bits), Expect = 6.8e-06, Sum P(3) = 6.8e-06
Identities = 26/94 (27%), Positives = 43/94 (45%)
Query: 136 EKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENSLLKSEIEKLREENKAMREAIN 195
EKQR++ S+ L R K N K + E EN L+ ++ +L EN R+
Sbjct: 73 EKQRKEASR-LQAVNR--KLTAMN-----KLLME--ENDRLQKQVSQLVHENSYFRQHTP 122
Query: 196 KACCPNCGMATTSRDTSMTTEEQQLRIENARLKA 229
P+ TS ++ +T+ + QL +N + A
Sbjct: 123 N---PSLPAKDTSCESVVTSGQHQLASQNPQRDA 153
Score = 42 (19.8 bits), Expect = 1.5e-14, Sum P(3) = 1.5e-14
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 686 ILPSGFSILPDGLESRPLVITS 707
+LPSGF I+P L+S ++S
Sbjct: 580 LLPSGFRIIP--LDSAKQEVSS 599
>TAIR|locus:2061544 [details] [associations]
symbol:PHB "AT2G34710" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0009855 "determination of bilateral symmetry"
evidence=RCA;IMP] [GO:0009944 "polarity specification of
adaxial/abaxial axis" evidence=RCA;IMP] [GO:0010014 "meristem
initiation" evidence=RCA;IMP] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA;IMP] [GO:0080060 "integument
development" evidence=IGI] [GO:0007062 "sister chromatid cohesion"
evidence=RCA] [GO:0007131 "reciprocal meiotic recombination"
evidence=RCA] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009793 "embryo development
ending in seed dormancy" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009880 "embryonic pattern
specification" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0009965 "leaf morphogenesis"
evidence=RCA] [GO:0010051 "xylem and phloem pattern formation"
evidence=RCA] [GO:0010073 "meristem maintenance" evidence=RCA]
[GO:0010075 "regulation of meristem growth" evidence=RCA]
[GO:0010090 "trichome morphogenesis" evidence=RCA] [GO:0010162
"seed dormancy process" evidence=RCA] [GO:0010182 "sugar mediated
signaling pathway" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0010431 "seed maturation" evidence=RCA] [GO:0010564 "regulation
of cell cycle process" evidence=RCA] [GO:0016049 "cell growth"
evidence=RCA] [GO:0016567 "protein ubiquitination" evidence=RCA]
[GO:0019915 "lipid storage" evidence=RCA] [GO:0033044 "regulation
of chromosome organization" evidence=RCA] [GO:0042138 "meiotic DNA
double-strand break formation" evidence=RCA] [GO:0045010 "actin
nucleation" evidence=RCA] [GO:0045132 "meiotic chromosome
segregation" evidence=RCA] [GO:0045595 "regulation of cell
differentiation" evidence=RCA] [GO:0048366 "leaf development"
evidence=RCA] [GO:0048589 "developmental growth" evidence=RCA]
[GO:0048765 "root hair cell differentiation" evidence=RCA]
[GO:0048825 "cotyledon development" evidence=RCA] [GO:0050826
"response to freezing" evidence=RCA] [GO:0051301 "cell division"
evidence=RCA] [GO:0071555 "cell wall organization" evidence=RCA]
[GO:0009955 "adaxial/abaxial pattern specification" evidence=IMP]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 INTERPRO:IPR002913 GO:GO:0005634
GO:GO:0030154 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 EMBL:AC003096
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0010072 Gene3D:3.30.530.20
InterPro:IPR023393 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
GO:GO:0009855 GO:GO:0009944 KO:K09338 EMBL:Y11122 EMBL:AJ441291
EMBL:AY099791 EMBL:BT000335 IPI:IPI00538463 PIR:T01364
RefSeq:NP_181018.1 UniGene:At.37771 HSSP:P10037
ProteinModelPortal:O04291 SMR:O04291 IntAct:O04291 STRING:O04291
PaxDb:O04291 PRIDE:O04291 EnsemblPlants:AT2G34710.1 GeneID:818036
KEGG:ath:AT2G34710 TAIR:At2g34710 eggNOG:NOG264261
HOGENOM:HOG000272677 InParanoid:O04291 OMA:NRKLNAM PhylomeDB:O04291
ProtClustDB:CLSN2679470 Genevestigator:O04291 GO:GO:0080060
InterPro:IPR013978 Pfam:PF08670 Uniprot:O04291
Length = 852
Score = 137 (53.3 bits), Expect = 2.1e-14, Sum P(3) = 2.1e-14
Identities = 31/84 (36%), Positives = 48/84 (57%)
Query: 113 YHRHTAEQIREMEALFKESPHPDEKQRQQLSKQL----GLAPRQVKFWFQNRRTQIKTIQ 168
Y R+T EQ+ +E ++ E P P +RQQL ++ + P+Q+K WFQNRR + K
Sbjct: 26 YVRYTPEQVEALERVYTECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK--- 82
Query: 169 ERHENSLLKSEIEKLREENKAMRE 192
+R E + L++ KL NK + E
Sbjct: 83 QRKEAARLQTVNRKLNAMNKLLME 106
Score = 136 (52.9 bits), Expect = 2.1e-14, Sum P(3) = 2.1e-14
Identities = 69/297 (23%), Positives = 127/297 (42%)
Query: 335 ASRDAGVVFVDLPKLVQSFTDVNQWKAMFPCLISKAATVDVICGGEGPNRNGAVQLMFAE 394
A+R G+V ++ K+ + D W + C T+ VI G G G ++L++ +
Sbjct: 219 AARACGLVSLEPMKVAEILKDRPSW--LRDC--RSVDTLSVIPAGNG----GTIELIYTQ 270
Query: 395 LQMLTPMVPTREVYFVRYCKQLSAEQWAIVDVSIDKVEENI----DASLAKCRKRPSGCI 450
+ T + R+ + +RY L + + + S+ ++ + +PSG +
Sbjct: 271 MYAPTTLAAARDFWTLRYSTCLEDGSYVVCERSLTSATGGPTGPPSSNFVRAEMKPSGFL 330
Query: 451 VEDKSNGHCKVTWVEHLECQKGTVHTMYRSIVSSGLAFGARHWMTTLQLQCERLVFFMAT 510
+ G + V+H++ +V + R + S + MT L+ R +
Sbjct: 331 IRPCDGGGSILHIVDHVDLDAWSVPEVMRPLYESSKILAQK--MTVAALRHVRQI----- 383
Query: 511 NVPTKDSSGVATLAGRK--SILK-LAQRMTWSFCRAIGASSYHVWNKVTSKTGEDIRVSS 567
+++SG G + ++L+ +QR+ F A+ W+ + S ED+ V
Sbjct: 384 ---AQETSGEVQYGGGRQPAVLRTFSQRLCRGFNDAVNGFVDDGWSPMGSDGAEDVTVMI 440
Query: 568 RKNLNDPGE-----------P-LGV-ILCAVSSVWLP-VSPNVLFDFLRDEAHRNEW 610
NL+ PG+ P G +LCA +S+ L V P VL FLR+ HR+EW
Sbjct: 441 --NLS-PGKFGGSQYGNSFLPSFGSGVLCAKASMLLQNVPPAVLVRFLRE--HRSEW 492
Score = 46 (21.3 bits), Expect = 2.1e-14, Sum P(3) = 2.1e-14
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 660 SMVVYAPVDITGMQSVITGCDSSNIAILPSGFSILPDGLESRP 702
+ +V+AP+D +S + + +LPSGF I+P +S P
Sbjct: 578 AQLVFAPID----ESF-----ADDAPLLPSGFRIIPLEQKSTP 611
Score = 43 (20.2 bits), Expect = 5.9e-05, Sum P(3) = 5.9e-05
Identities = 16/66 (24%), Positives = 27/66 (40%)
Query: 159 NRRTQIKTIQERHENSLLKSEIEKLREENKAMREAINKACCPNCGMATTSRDTSMTTEEQ 218
NR+ EN L+ ++ L EN M+ ++ A G T + S+ Q
Sbjct: 94 NRKLNAMNKLLMEENDRLQKQVSNLVYENGHMKHQLHTAS----GTTTDNSCESVVVSGQ 149
Query: 219 QLRIEN 224
Q + +N
Sbjct: 150 QHQQQN 155
>UNIPROTKB|H0YJ32 [details] [associations]
symbol:SHOX2 "Short stature homeobox protein 2"
species:9606 "Homo sapiens" [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 HGNC:HGNC:10854
EMBL:AC112502 Ensembl:ENST00000555977 Uniprot:H0YJ32
Length = 178
Score = 135 (52.6 bits), Expect = 5.8e-08, P = 5.8e-08
Identities = 30/77 (38%), Positives = 47/77 (61%)
Query: 117 TAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENSLL 176
T EQ+ E+E LF E+ +PD R++LS++LGL+ +V+ WFQNRR + + + EN L
Sbjct: 52 TLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCR----KQENQLH 107
Query: 177 KSEIEKLREENKAMREA 193
K + + +A R A
Sbjct: 108 KGVLIGAASQFEACRVA 124
>TAIR|locus:2205075 [details] [associations]
symbol:ATHB13 species:3702 "Arabidopsis thaliana"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA;ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA;IDA] [GO:0009744 "response to sucrose
stimulus" evidence=IMP] [GO:0009965 "leaf morphogenesis"
evidence=IMP] [GO:0048826 "cotyledon morphogenesis" evidence=IMP]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009744
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009965 GO:GO:0000976 KO:K09338 EMBL:AF208044
EMBL:AC013289 EMBL:AY057572 EMBL:AY133645 EMBL:AY086888
IPI:IPI00519626 PIR:H96719 RefSeq:NP_177136.1 UniGene:At.23736
UniGene:At.68137 ProteinModelPortal:Q8LC03 SMR:Q8LC03 STRING:Q8LC03
PaxDb:Q8LC03 PRIDE:Q8LC03 EnsemblPlants:AT1G69780.1 GeneID:843314
KEGG:ath:AT1G69780 GeneFarm:3958 TAIR:At1g69780 eggNOG:NOG250192
HOGENOM:HOG000006025 InParanoid:Q8LC03 OMA:NPILPSC PhylomeDB:Q8LC03
ProtClustDB:CLSN2682576 Genevestigator:Q8LC03 GO:GO:0048826
Uniprot:Q8LC03
Length = 294
Score = 152 (58.6 bits), Expect = 7.7e-08, P = 7.7e-08
Identities = 37/134 (27%), Positives = 63/134 (47%)
Query: 115 RHTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENS 174
R EQ++ +E F+ + +++ QL++ LGL PRQ+ WFQNRR + KT Q +
Sbjct: 88 RLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYD 147
Query: 175 LLKSEIEKLREENKAMREAINKACCPNCGMATTSRDTSMTTEEQQLRIENARLKAEVEKL 234
LK + + L+ EN ++ K G+ + S+ ++ + R + L
Sbjct: 148 TLKRQFDTLKAENDLLQTHNQKLQAEIMGLKNREQTESINLNKETEGSCSNRSDNSSDNL 207
Query: 235 RAAVGKCPPGATST 248
R + PP ST
Sbjct: 208 RLDISTAPPSNDST 221
>TAIR|locus:2049614 [details] [associations]
symbol:HB17 "homeobox-leucine zipper protein 17"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00340 SMART:SM00389 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 KO:K09338 EMBL:AJ431181
EMBL:AC005560 IPI:IPI00540169 PIR:F84424 RefSeq:NP_178252.2
UniGene:At.42490 HSSP:P01366 ProteinModelPortal:Q8S9N6 SMR:Q8S9N6
PRIDE:Q8S9N6 EnsemblPlants:AT2G01430.1 GeneID:814671
KEGG:ath:AT2G01430 GeneFarm:3960 TAIR:At2g01430 eggNOG:NOG248755
HOGENOM:HOG000241612 InParanoid:Q8S9N6 OMA:PRCERIT PhylomeDB:Q8S9N6
ProtClustDB:CLSN2917976 Genevestigator:Q8S9N6 GermOnline:AT2G01430
Uniprot:Q8S9N6
Length = 275
Score = 147 (56.8 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 35/100 (35%), Positives = 52/100 (52%)
Query: 115 RHTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENS 174
R T EQ R +E F+++ + KQ++ L+K L L PRQ++ WFQNRR + K Q E
Sbjct: 142 RLTREQSRLLEDSFRQNHTLNPKQKEVLAKHLMLRPRQIEVWFQNRRARSKLKQTEMECE 201
Query: 175 LLKSEIEKLREENKAMREAINKACCPNCGMATTSRDTSMT 214
LK L EEN + + + G T + +S+T
Sbjct: 202 YLKRWFGSLTEENHRLHREVEELRAMKVGPTTVNSASSLT 241
>TAIR|locus:2202795 [details] [associations]
symbol:AtHB23 "homeobox protein 23" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009739 "response
to gibberellin stimulus" evidence=IEP] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009739 GO:GO:0000976
KO:K09338 HOGENOM:HOG000006025 EMBL:AC005508 EMBL:BT009727
EMBL:AK228056 EMBL:AY084913 IPI:IPI00532646 PIR:F86396
RefSeq:NP_564268.1 UniGene:At.43561 ProteinModelPortal:Q8LFD3
SMR:Q8LFD3 STRING:Q8LFD3 PRIDE:Q8LFD3 EnsemblPlants:AT1G26960.1
GeneID:839587 KEGG:ath:AT1G26960 GeneFarm:3956 TAIR:At1g26960
eggNOG:NOG257807 InParanoid:Q8LFD3 OMA:LAFFPEN PhylomeDB:Q8LFD3
ProtClustDB:CLSN2917066 Genevestigator:Q8LFD3 GermOnline:AT1G26960
Uniprot:Q8LFD3
Length = 255
Score = 144 (55.7 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 28/77 (36%), Positives = 47/77 (61%)
Query: 115 RHTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENS 174
R EQ++ +E F+ + ++ +L++ LGL PRQ+ WFQNRR + KT Q +
Sbjct: 74 RLNMEQLKALEKDFELGNKLESDRKLELARALGLQPRQIAIWFQNRRARSKTKQLEKDYD 133
Query: 175 LLKSEIEKLREENKAMR 191
+LK + E LR+EN+ ++
Sbjct: 134 MLKRQFESLRDENEVLQ 150
>UNIPROTKB|A6NLG4 [details] [associations]
symbol:SHOX2 "cDNA FLJ38019 fis, clone CTONG2012758, highly
similar to Short stature homeobox protein 2" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 EMBL:CH471052
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
HOGENOM:HOG000231518 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GO:GO:0000976 UniGene:Hs.55967 HGNC:HGNC:10854
HOVERGEN:HBG007233 NextBio:25151 EMBL:AC112502 EMBL:AK095338
IPI:IPI01024865 SMR:A6NLG4 STRING:A6NLG4 Ensembl:ENST00000441443
Ensembl:ENST00000490689 Uniprot:A6NLG4
Length = 190
Score = 135 (52.6 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 30/77 (38%), Positives = 47/77 (61%)
Query: 117 TAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENSLL 176
T EQ+ E+E LF E+ +PD R++LS++LGL+ +V+ WFQNRR + + + EN L
Sbjct: 19 TLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCR----KQENQLH 74
Query: 177 KSEIEKLREENKAMREA 193
K + + +A R A
Sbjct: 75 KGVLIGAASQFEACRVA 91
>TAIR|locus:2084228 [details] [associations]
symbol:HB-1 "homeobox 1" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;IDA] [GO:0009637
"response to blue light" evidence=IEP] [GO:0009651 "response to
salt stress" evidence=IEP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0010167 "response
to nitrate" evidence=RCA] [GO:0015706 "nitrate transport"
evidence=RCA] [GO:0015996 "chlorophyll catabolic process"
evidence=RCA] [GO:0042803 "protein homodimerization activity"
evidence=IDA] [GO:0009965 "leaf morphogenesis" evidence=IMP]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0045893
GO:GO:0042803 GO:GO:0009651 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 GO:GO:0009637 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0009965 EMBL:AC009325 GO:GO:0000976 KO:K09338
HOGENOM:HOG000006025 EMBL:X58821 EMBL:AY058188 EMBL:AY098972
EMBL:M90416 IPI:IPI00536407 PIR:S16325 RefSeq:NP_186796.1
UniGene:At.41275 UniGene:At.47815 ProteinModelPortal:Q02283
SMR:Q02283 STRING:Q02283 EnsemblPlants:AT3G01470.1 GeneID:821138
KEGG:ath:AT3G01470 GeneFarm:3968 TAIR:At3g01470 eggNOG:NOG245596
InParanoid:Q02283 OMA:QVHLLEK PhylomeDB:Q02283
ProtClustDB:CLSN2684999 Genevestigator:Q02283 GermOnline:AT3G01470
Uniprot:Q02283
Length = 272
Score = 140 (54.3 bits), Expect = 6.2e-07, Sum P(2) = 6.2e-07
Identities = 30/69 (43%), Positives = 43/69 (62%)
Query: 115 RHTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENS 174
R T EQ+ +E F+ + +++ QL+K+LGL PRQV WFQNRR + KT Q +
Sbjct: 71 RLTTEQVHLLEKSFETENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWKTKQLERDYD 130
Query: 175 LLKSEIEKL 183
LLKS ++L
Sbjct: 131 LLKSTYDQL 139
Score = 44 (20.5 bits), Expect = 6.2e-07, Sum P(2) = 6.2e-07
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 2 GVVDMSNNPPTSRTKDFFASP 22
G M N TS+ + FF+SP
Sbjct: 32 GARSMMNMEETSKRRPFFSSP 52
>TAIR|locus:2102107 [details] [associations]
symbol:HB20 "homeobox protein 20" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009733 "response
to auxin stimulus" evidence=IEP] [GO:0000041 "transition metal ion
transport" evidence=RCA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0009733 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 KO:K09338
HOGENOM:HOG000006025 EMBL:AC008261 EMBL:AK228890 EMBL:BT029221
EMBL:AY087631 IPI:IPI00546192 RefSeq:NP_186771.1 UniGene:At.41313
HSSP:P14859 ProteinModelPortal:Q8LAT0 SMR:Q8LAT0 IntAct:Q8LAT0
PaxDb:Q8LAT0 PRIDE:Q8LAT0 EnsemblPlants:AT3G01220.1 GeneID:821232
KEGG:ath:AT3G01220 GeneFarm:3967 TAIR:At3g01220 eggNOG:NOG328135
InParanoid:Q8LAT0 OMA:SDINLEM PhylomeDB:Q8LAT0
ProtClustDB:CLSN2684985 Genevestigator:Q8LAT0 Uniprot:Q8LAT0
Length = 286
Score = 140 (54.3 bits), Expect = 8.3e-07, Sum P(2) = 8.3e-07
Identities = 29/78 (37%), Positives = 47/78 (60%)
Query: 119 EQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENSLLKS 178
EQ++ +E F+ + +++ QL+K LG+ PRQ+ WFQNRR + KT Q + LK
Sbjct: 94 EQVKALEKSFELGNKLEPERKIQLAKALGMQPRQIAIWFQNRRARWKTRQLERDYDSLKK 153
Query: 179 EIEKLREENKAMREAINK 196
+ E L+ +N ++ A NK
Sbjct: 154 QFESLKSDNASLL-AYNK 170
Score = 44 (20.5 bits), Expect = 8.3e-07, Sum P(2) = 8.3e-07
Identities = 16/53 (30%), Positives = 27/53 (50%)
Query: 322 ENSSNGKSNRSIEASRDAGVVFVDLPKLVQSFTDVNQWKAMFPCLISKAATVD 374
E ++ +N S E S D + +++P+ + T VN K +FP I +A D
Sbjct: 193 EAEASWSNNGSTENSSD---INLEMPRETIT-THVNTIKDLFPSSIRSSAHDD 241
>TAIR|locus:2129061 [details] [associations]
symbol:HAT1 species:3702 "Arabidopsis thaliana"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA;ISS;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003006
"developmental process involved in reproduction" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0010582 "floral
meristem determinacy" evidence=IGI] [GO:0043621 "protein
self-association" evidence=IPI] [GO:0048467 "gynoecium development"
evidence=IGI] [GO:0048507 "meristem development" evidence=IGI]
[GO:0080127 "fruit septum development" evidence=IGI]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR006712 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 Pfam:PF04618 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00340 SMART:SM00389
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0010582
EMBL:Z97343 GO:GO:0000976 KO:K09338 HOGENOM:HOG000241612
eggNOG:KOG0483 EMBL:AL161546 EMBL:U09332 EMBL:U09333 EMBL:AJ441252
EMBL:BT005756 EMBL:BT006112 EMBL:AY087322 EMBL:AK228587
IPI:IPI00538010 PIR:B71444 RefSeq:NP_193476.1 UniGene:At.19738
ProteinModelPortal:P46600 SMR:P46600 EnsemblPlants:AT4G17460.1
GeneID:827457 KEGG:ath:AT4G17460 GeneFarm:3979 TAIR:At4g17460
InParanoid:P46600 OMA:LMCPSCE PhylomeDB:P46600
ProtClustDB:CLSN2685891 Genevestigator:P46600 GermOnline:AT4G17460
GO:GO:0080127 GO:GO:0048467 Uniprot:P46600
Length = 282
Score = 142 (55.0 bits), Expect = 9.3e-07, P = 9.3e-07
Identities = 34/80 (42%), Positives = 48/80 (60%)
Query: 115 RHTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENS 174
R + +Q +E FKE + KQ+ L+K+LGL RQV+ WFQNRR + K Q +
Sbjct: 138 RLSKDQSAVLEDTFKEHNTLNPKQKLALAKKLGLTARQVEVWFQNRRARTKLKQTEVDCE 197
Query: 175 LLKSEIEKLREENKAM-REA 193
LK +EKL EEN+ + +EA
Sbjct: 198 YLKRCVEKLTEENRRLEKEA 217
>TAIR|locus:2129136 [details] [associations]
symbol:HB-2 "homeobox protein 2" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS;IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA;IDA]
[GO:0008283 "cell proliferation" evidence=IMP] [GO:0009733
"response to auxin stimulus" evidence=IMP] [GO:0009826
"unidimensional cell growth" evidence=IMP] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0048364 "root development" evidence=IMP] [GO:0009735 "response
to cytokinin stimulus" evidence=IEP] [GO:0009641 "shade avoidance"
evidence=IEP] [GO:0010017 "red or far-red light signaling pathway"
evidence=IEP] [GO:0010218 "response to far red light" evidence=IEP]
[GO:0042803 "protein homodimerization activity" evidence=IDA]
[GO:0010016 "shoot system morphogenesis" evidence=IMP]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR006712 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 Pfam:PF04618 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00340 SMART:SM00389
GO:GO:0005634 GO:GO:0045892 GO:GO:0042803 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0009735 GO:GO:0009733 GO:GO:0008283
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0010218
GO:GO:0048364 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009826
EMBL:AL161544 GO:GO:0009585 GO:GO:0000976 GO:GO:0010017 KO:K09338
GO:GO:0009641 EMBL:Z97342 EMBL:M90394 EMBL:Z19602 EMBL:X68145
EMBL:X68146 EMBL:AF375453 EMBL:AY081747 EMBL:EF193551 EMBL:EF193552
EMBL:EF193553 EMBL:EF193554 EMBL:EF193555 EMBL:EF193556
EMBL:EF193557 EMBL:EF193558 EMBL:EF193559 EMBL:EF193560
EMBL:EF193561 EMBL:EF193562 EMBL:EF193563 EMBL:EF193564
EMBL:EF193565 EMBL:AY174653 EMBL:AY174654 EMBL:AY174655
EMBL:AY174656 IPI:IPI00517186 PIR:S31424 RefSeq:NP_193411.1
UniGene:At.24419 UniGene:At.74809 ProteinModelPortal:Q05466
SMR:Q05466 IntAct:Q05466 STRING:Q05466 EnsemblPlants:AT4G16780.1
GeneID:827384 KEGG:ath:AT4G16780 GeneFarm:3977 TAIR:At4g16780
eggNOG:NOG150160 InParanoid:Q05466 OMA:EDGDNSR PhylomeDB:Q05466
ProtClustDB:CLSN2685845 Genevestigator:Q05466 GermOnline:AT4G16780
GO:GO:0010016 Uniprot:Q05466
Length = 284
Score = 142 (55.0 bits), Expect = 9.5e-07, P = 9.5e-07
Identities = 31/82 (37%), Positives = 48/82 (58%)
Query: 115 RHTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENS 174
R + +Q +E FK+ + KQ+Q L+KQLGL RQV+ WFQNRR + K Q +
Sbjct: 132 RLSKDQSAILEETFKDHSTLNPKQKQALAKQLGLRARQVEVWFQNRRARTKLKQTEVDCE 191
Query: 175 LLKSEIEKLREENKAMREAINK 196
L+ E L EEN+ +++ + +
Sbjct: 192 FLRRCCENLTEENRRLQKEVTE 213
>TAIR|locus:2079542 [details] [associations]
symbol:HB-12 "homeobox 12" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009651 "response
to salt stress" evidence=IGI;RCA] [GO:0009737 "response to abscisic
acid stimulus" evidence=IEP;RCA;IMP] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0009414 "response to water deprivation" evidence=IEP]
[GO:0009615 "response to virus" evidence=IEP] [GO:0006970 "response
to osmotic stress" evidence=IEP] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0009737 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0045893 GO:GO:0009651 GO:GO:0009414 GO:GO:0003700
GO:GO:0006351 GO:GO:0009615 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000976 EMBL:AF001949 EMBL:AL138642 EMBL:AY059828
EMBL:BT002206 EMBL:AY087187 IPI:IPI00522302 PIR:T47981 PIR:T51751
RefSeq:NP_191748.1 UniGene:At.25517 HSSP:P02836
ProteinModelPortal:Q9M276 SMR:Q9M276 STRING:Q9M276
EnsemblPlants:AT3G61890.1 GeneID:825362 KEGG:ath:AT3G61890
GeneFarm:3970 TAIR:At3g61890 eggNOG:NOG252905 HOGENOM:HOG000006310
InParanoid:Q9M276 KO:K09338 OMA:HELMNIV PhylomeDB:Q9M276
ProtClustDB:CLSN2683559 Genevestigator:Q9M276 GermOnline:AT3G61890
Uniprot:Q9M276
Length = 235
Score = 139 (54.0 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 26/78 (33%), Positives = 48/78 (61%)
Query: 115 RHTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENS 174
R + EQI+ +E +F+ + +++ Q++++LGL PRQV WFQN+R + KT Q E +
Sbjct: 33 RFSEEQIKSLELIFESETRLEPRKKVQVARELGLQPRQVAIWFQNKRARWKTKQLEKEYN 92
Query: 175 LLKSEIEKLREENKAMRE 192
L++ L + + M++
Sbjct: 93 TLRANYNNLASQFEIMKK 110
>TAIR|locus:2040520 [details] [associations]
symbol:HB22 "homeobox protein 22" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003700 GO:GO:0006351 EMBL:AC006919 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000976 KO:K09338 HOGENOM:HOG000006025
EMBL:AC006282 EMBL:DQ056569 IPI:IPI00527137 PIR:E84782
RefSeq:NP_850266.1 UniGene:At.53052 ProteinModelPortal:Q4PSR7
SMR:Q4PSR7 EnsemblPlants:AT2G36610.1 GeneID:818233
KEGG:ath:AT2G36610 GeneFarm:3964 TAIR:At2g36610 eggNOG:NOG297545
InParanoid:Q4PSR7 OMA:MEYWSSS PhylomeDB:Q4PSR7
ProtClustDB:CLSN2918190 Genevestigator:Q4PSR7 GermOnline:AT2G36610
Uniprot:Q4PSR7
Length = 185
Score = 131 (51.2 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 30/86 (34%), Positives = 50/86 (58%)
Query: 117 TAEQIREMEALFKESP--HPDEK------QRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQ 168
T+EQ++ +E F+E +PD K ++ +LSK+LGL PRQ+ WFQNR+ + K Q
Sbjct: 76 TSEQLKFLERSFQEEIKLNPDRKMKLNPDRKMKLSKELGLQPRQIAVWFQNRKARWKNKQ 135
Query: 169 ERHENSLLKSEIEKLREENKAMREAI 194
H L+ E + + E + ++E +
Sbjct: 136 LEHLYESLRQEFDIVSREKELLQEEL 161
>RGD|3116 [details] [associations]
symbol:Msx2 "msh homeobox 2" species:10116 "Rattus norvegicus"
[GO:0000122 "negative regulation of transcription from RNA polymerase
II promoter" evidence=IEA;ISO] [GO:0000978 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding" evidence=IDA]
[GO:0000982 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0000989 "transcription factor binding transcription
factor activity" evidence=IEA;ISO] [GO:0001503 "ossification"
evidence=ISO] [GO:0001649 "osteoblast differentiation"
evidence=ISO;ISS] [GO:0002063 "chondrocyte development"
evidence=IEA;ISO] [GO:0002076 "osteoblast development"
evidence=IEA;IEP;ISO] [GO:0003148 "outflow tract septum
morphogenesis" evidence=IEA;ISO] [GO:0003151 "outflow tract
morphogenesis" evidence=ISO] [GO:0003198 "epithelial to mesenchymal
transition involved in endocardial cushion formation"
evidence=IEA;ISO] [GO:0003416 "endochondral bone growth"
evidence=IEA;ISO] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005667 "transcription factor
complex" evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0008285 "negative regulation of cell proliferation"
evidence=IEA;ISO] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA;ISO] [GO:0023019 "signal transduction
involved in regulation of gene expression" evidence=IEA;ISO]
[GO:0030326 "embryonic limb morphogenesis" evidence=ISO] [GO:0030509
"BMP signaling pathway" evidence=ISO] [GO:0030513 "positive
regulation of BMP signaling pathway" evidence=IEA;ISO] [GO:0032792
"negative regulation of CREB transcription factor activity"
evidence=IEA;ISO] [GO:0035115 "embryonic forelimb morphogenesis"
evidence=IEA;ISO] [GO:0035116 "embryonic hindlimb morphogenesis"
evidence=IEA;ISO] [GO:0035313 "wound healing, spreading of epidermal
cells" evidence=IEA;ISO] [GO:0035880 "embryonic nail plate
morphogenesis" evidence=IEA;ISO] [GO:0042060 "wound healing"
evidence=ISO] [GO:0042476 "odontogenesis" evidence=ISO] [GO:0042640
"anagen" evidence=IEA;ISO] [GO:0042733 "embryonic digit
morphogenesis" evidence=ISO] [GO:0042981 "regulation of apoptotic
process" evidence=ISO] [GO:0043065 "positive regulation of apoptotic
process" evidence=IMP] [GO:0043066 "negative regulation of apoptotic
process" evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA;ISO] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IEA;ISO;ISS] [GO:0045599 "negative
regulation of fat cell differentiation" evidence=IEA;ISO] [GO:0045617
"negative regulation of keratinocyte differentiation"
evidence=IEA;ISO] [GO:0045669 "positive regulation of osteoblast
differentiation" evidence=IEA;ISO] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=ISO;ISS] [GO:0048863 "stem
cell differentiation" evidence=IEA;ISO] [GO:0051216 "cartilage
development" evidence=ISO;IMP] [GO:0051795 "positive regulation of
catagen" evidence=IEA;ISO] [GO:0060346 "bone trabecula formation"
evidence=IEA;ISO] [GO:0060349 "bone morphogenesis" evidence=ISO]
[GO:0060364 "frontal suture morphogenesis" evidence=IEA;ISO]
[GO:0060444 "branching involved in mammary gland duct morphogenesis"
evidence=IEA;ISO] [GO:0061180 "mammary gland epithelium development"
evidence=ISO] [GO:0061312 "BMP signaling pathway involved in heart
development" evidence=IEA;ISO] [GO:0070166 "enamel mineralization"
evidence=IEA;ISO] [GO:0071363 "cellular response to growth factor
stimulus" evidence=IEA;ISO] [GO:0071392 "cellular response to
estradiol stimulus" evidence=IEA;ISO] [GO:2000678 "negative
regulation of transcription regulatory region DNA binding"
evidence=IEA;ISO] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 RGD:3116 GO:GO:0005737
GO:GO:0045892 GO:GO:0043066 GO:GO:0008285 GO:GO:0071363 GO:GO:0009952
GO:GO:0048863 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0000978 GO:GO:0000122
GO:GO:0043065 GO:GO:0000982 GO:GO:0002076 GO:GO:0030513 GO:GO:0035313
GO:GO:0051216 GO:GO:0045669 GO:GO:0045599 GO:GO:0035116 GO:GO:0042640
GO:GO:0035115 GO:GO:0070166 GO:GO:0071392 GO:GO:0000989 GO:GO:0023019
GO:GO:0060444 GO:GO:0002063 GO:GO:0060346 GO:GO:0032792 GO:GO:0003416
GO:GO:0003148 GO:GO:0003198 GO:GO:2000678 GO:GO:0060364
eggNOG:NOG298790 HOGENOM:HOG000231922 OrthoDB:EOG4HQDK0 GO:GO:0045617
GO:GO:0061312 GO:GO:0035880 GO:GO:0051795 EMBL:U12514 IPI:IPI00231048
UniGene:Rn.10414 ProteinModelPortal:P52953 SMR:P52953 STRING:P52953
HOVERGEN:HBG066288 InParanoid:P52953 Genevestigator:P52953
GermOnline:ENSRNOG00000018355 Uniprot:P52953
Length = 139
Score = 108 (43.1 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 26/74 (35%), Positives = 38/74 (51%)
Query: 117 TAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENSLL 176
T Q+ +E F++ + +R + S L L QVK WFQNRR + K +QE
Sbjct: 22 TTSQLLALERKFRQKQYLSIAERAEFSSSLNLTETQVKIWFQNRRAKAKRLQE------- 74
Query: 177 KSEIEKLREENKAM 190
+E+EKL+ K M
Sbjct: 75 -AELEKLKMAAKPM 87
Score = 38 (18.4 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 12/22 (54%), Positives = 14/22 (63%)
Query: 686 ILPSGFSILPDGLESRPLVITS 707
+LPSGFS LP + S PL S
Sbjct: 87 MLPSGFS-LPFPINS-PLQAAS 106
>UNIPROTKB|P52953 [details] [associations]
symbol:Msx2 "Homeobox protein MSX-2" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IEA] [GO:0000989
"transcription factor binding transcription factor activity"
evidence=IEA] [GO:0002063 "chondrocyte development" evidence=IEA]
[GO:0003148 "outflow tract septum morphogenesis" evidence=IEA]
[GO:0003198 "epithelial to mesenchymal transition involved in
endocardial cushion formation" evidence=IEA] [GO:0003416
"endochondral bone growth" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0023019 "signal transduction
involved in regulation of gene expression" evidence=IEA]
[GO:0030513 "positive regulation of BMP signaling pathway"
evidence=IEA] [GO:0032792 "negative regulation of CREB
transcription factor activity" evidence=IEA] [GO:0035115 "embryonic
forelimb morphogenesis" evidence=IEA] [GO:0035116 "embryonic
hindlimb morphogenesis" evidence=IEA] [GO:0035313 "wound healing,
spreading of epidermal cells" evidence=IEA] [GO:0035880 "embryonic
nail plate morphogenesis" evidence=IEA] [GO:0042640 "anagen"
evidence=IEA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IEA] [GO:0045599 "negative regulation of fat cell
differentiation" evidence=IEA] [GO:0045617 "negative regulation of
keratinocyte differentiation" evidence=IEA] [GO:0045669 "positive
regulation of osteoblast differentiation" evidence=IEA] [GO:0048863
"stem cell differentiation" evidence=IEA] [GO:0051795 "positive
regulation of catagen" evidence=IEA] [GO:0060346 "bone trabecula
formation" evidence=IEA] [GO:0060364 "frontal suture morphogenesis"
evidence=IEA] [GO:0060444 "branching involved in mammary gland duct
morphogenesis" evidence=IEA] [GO:0061312 "BMP signaling pathway
involved in heart development" evidence=IEA] [GO:0070166 "enamel
mineralization" evidence=IEA] [GO:0071363 "cellular response to
growth factor stimulus" evidence=IEA] [GO:0071392 "cellular
response to estradiol stimulus" evidence=IEA] [GO:2000678 "negative
regulation of transcription regulatory region DNA binding"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 RGD:3116
GO:GO:0005737 GO:GO:0045892 GO:GO:0043066 GO:GO:0008285
GO:GO:0071363 GO:GO:0009952 GO:GO:0048863 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0000978 GO:GO:0000122 GO:GO:0043065 GO:GO:0000982
GO:GO:0002076 GO:GO:0030513 GO:GO:0035313 GO:GO:0051216
GO:GO:0045669 GO:GO:0045599 GO:GO:0035116 GO:GO:0042640
GO:GO:0035115 GO:GO:0070166 GO:GO:0071392 GO:GO:0000989
GO:GO:0023019 GO:GO:0060444 GO:GO:0002063 GO:GO:0060346
GO:GO:0032792 GO:GO:0003416 GO:GO:0003148 GO:GO:0003198
GO:GO:2000678 GO:GO:0060364 eggNOG:NOG298790 HOGENOM:HOG000231922
OrthoDB:EOG4HQDK0 GO:GO:0045617 GO:GO:0061312 GO:GO:0035880
GO:GO:0051795 EMBL:U12514 IPI:IPI00231048 UniGene:Rn.10414
ProteinModelPortal:P52953 SMR:P52953 STRING:P52953
HOVERGEN:HBG066288 InParanoid:P52953 Genevestigator:P52953
GermOnline:ENSRNOG00000018355 Uniprot:P52953
Length = 139
Score = 108 (43.1 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 26/74 (35%), Positives = 38/74 (51%)
Query: 117 TAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENSLL 176
T Q+ +E F++ + +R + S L L QVK WFQNRR + K +QE
Sbjct: 22 TTSQLLALERKFRQKQYLSIAERAEFSSSLNLTETQVKIWFQNRRAKAKRLQE------- 74
Query: 177 KSEIEKLREENKAM 190
+E+EKL+ K M
Sbjct: 75 -AELEKLKMAAKPM 87
Score = 38 (18.4 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 12/22 (54%), Positives = 14/22 (63%)
Query: 686 ILPSGFSILPDGLESRPLVITS 707
+LPSGFS LP + S PL S
Sbjct: 87 MLPSGFS-LPFPINS-PLQAAS 106
>TAIR|locus:2154724 [details] [associations]
symbol:HB52 "homeobox protein 52" species:3702
"Arabidopsis thaliana" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009637 "response
to blue light" evidence=IEP] [GO:0009646 "response to absence of
light" evidence=IEP] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0009637
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009646 EMBL:AB007644
EMBL:BT015927 EMBL:BT021920 EMBL:AK229211 IPI:IPI00520413
RefSeq:NP_200209.1 UniGene:At.29523 ProteinModelPortal:Q9FN29
SMR:Q9FN29 EnsemblPlants:AT5G53980.1 GeneID:835481
KEGG:ath:AT5G53980 GeneFarm:3987 TAIR:At5g53980 eggNOG:NOG240187
HOGENOM:HOG000029156 InParanoid:Q9FN29 OMA:DELYACF PhylomeDB:Q9FN29
ProtClustDB:CLSN2916425 Genevestigator:Q9FN29 GermOnline:AT5G53980
Uniprot:Q9FN29
Length = 156
Score = 123 (48.4 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 31/92 (33%), Positives = 51/92 (55%)
Query: 115 RHTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKT-------- 166
R T +Q+R++E F + + + QLS QLGL RQV WFQN+R + KT
Sbjct: 14 RLTQDQVRQLEKCFTMNKKLEPDLKLQLSNQLGLPQRQVAVWFQNKRARFKTQSLEVQHC 73
Query: 167 -IQERHENSLLKSEIEKLREENKAMREAINKA 197
+Q +HE +L S+ KL + + +++ + +A
Sbjct: 74 TLQSKHEAAL--SDKAKLEHQVQFLQDELKRA 103
>TAIR|locus:2150901 [details] [associations]
symbol:HB-3 "homeobox 3" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;IDA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000976 KO:K09338 HOGENOM:HOG000006025
ProtClustDB:CLSN2684985 EMBL:AL353993 EMBL:X62644 EMBL:AK229364
EMBL:U09340 IPI:IPI00541406 IPI:IPI00570430 PIR:S20930 PIR:T49950
PIR:T52370 RefSeq:NP_568309.2 UniGene:At.49022
ProteinModelPortal:Q00466 SMR:Q00466 EnsemblPlants:AT5G15150.1
GeneID:831367 KEGG:ath:AT5G15150 GeneFarm:3985 TAIR:At5g15150
eggNOG:NOG322183 InParanoid:Q00466 OMA:EERNNIN PhylomeDB:Q00466
Genevestigator:Q00466 GermOnline:AT5G15150 Uniprot:Q00466
Length = 314
Score = 142 (55.0 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 31/82 (37%), Positives = 48/82 (58%)
Query: 115 RHTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENS 174
R EQ+R +E F+ + +++ QL+K LGL PRQ+ WFQNRR + KT Q +
Sbjct: 118 RLNLEQVRALEKSFELGNKLEPERKMQLAKALGLQPRQIAIWFQNRRARWKTKQLERDYD 177
Query: 175 LLKSEIEKLREENKAMREAINK 196
LK + + L+ +N ++ A NK
Sbjct: 178 SLKKQFDVLKSDNDSLL-AHNK 198
>TAIR|locus:2062754 [details] [associations]
symbol:HB-7 "homeobox 7" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0009409 "response to cold" evidence=RCA] [GO:0009414 "response
to water deprivation" evidence=IEP;RCA] [GO:0009737 "response to
abscisic acid stimulus" evidence=IEP;RCA] [GO:0009738 "abscisic
acid mediated signaling pathway" evidence=IGI;RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0045893 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009738
GO:GO:0009414 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000976 eggNOG:NOG252905 HOGENOM:HOG000006310
ProtClustDB:CLSN2683559 EMBL:X67032 EMBL:AC005819 EMBL:AY045826
EMBL:AY091364 IPI:IPI00544746 PIR:H84905 PIR:S47137
RefSeq:NP_182191.1 UniGene:At.136 ProteinModelPortal:P46897
SMR:P46897 STRING:P46897 EnsemblPlants:AT2G46680.1 GeneID:819280
KEGG:ath:AT2G46680 GeneFarm:3966 TAIR:At2g46680 InParanoid:P46897
OMA:THHESEN PhylomeDB:P46897 Genevestigator:P46897 Uniprot:P46897
Length = 258
Score = 139 (54.0 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 25/78 (32%), Positives = 50/78 (64%)
Query: 115 RHTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENS 174
R + EQI+ +E +F+ + +++ QL+++LGL PRQV WFQN+R + K+ Q E +
Sbjct: 35 RFSDEQIKSLEMMFESETRLEPRKKVQLARELGLQPRQVAIWFQNKRARWKSKQLETEYN 94
Query: 175 LLKSEIEKLREENKAMRE 192
+L+ + L + +++++
Sbjct: 95 ILRQNYDNLASQFESLKK 112
>TAIR|locus:2059143 [details] [associations]
symbol:HAT9 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006473 "protein acetylation" evidence=RCA]
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00340 SMART:SM00389 GO:GO:0005634
EMBL:AC004786 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 KO:K09338 HOGENOM:HOG000241612
ProtClustDB:CLSN2683864 EMBL:U09341 EMBL:U09342 EMBL:AJ441253
EMBL:AK229218 IPI:IPI00526618 PIR:A84617 PIR:T52371 PIR:T52372
RefSeq:NP_179865.1 UniGene:At.12844 UniGene:At.67823
ProteinModelPortal:P46603 SMR:P46603 EnsemblPlants:AT2G22800.1
GeneID:816811 KEGG:ath:AT2G22800 GeneFarm:3963 TAIR:At2g22800
eggNOG:NOG323848 InParanoid:P46603 OMA:MHMPAST PhylomeDB:P46603
Genevestigator:P46603 GermOnline:AT2G22800 Uniprot:P46603
Length = 274
Score = 139 (54.0 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 32/82 (39%), Positives = 47/82 (57%)
Query: 115 RHTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENS 174
R T +Q +E FK+ + KQ+Q L++QL L PRQV+ WFQNRR + K Q +
Sbjct: 116 RLTKQQSALLEESFKDHSTLNPKQKQVLARQLNLRPRQVEVWFQNRRARTKLKQTEVDCE 175
Query: 175 LLKSEIEKLREENKAMREAINK 196
LK E L +EN +++ I +
Sbjct: 176 FLKKCCETLADENIRLQKEIQE 197
>RGD|3674 [details] [associations]
symbol:Shox2 "short stature homeobox 2" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IEA;ISO] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0001649 "osteoblast differentiation"
evidence=IEA;ISO] [GO:0002053 "positive regulation of mesenchymal
cell proliferation" evidence=IEA;ISO] [GO:0002062 "chondrocyte
differentiation" evidence=ISO] [GO:0002063 "chondrocyte development"
evidence=IEA;ISO] [GO:0003170 "heart valve development"
evidence=IEA;ISO] [GO:0003209 "cardiac atrium morphogenesis"
evidence=IEA;ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030326 "embryonic limb morphogenesis"
evidence=IEA;ISO] [GO:0032330 "regulation of chondrocyte
differentiation" evidence=IEA;ISO] [GO:0035115 "embryonic forelimb
morphogenesis" evidence=ISO] [GO:0045880 "positive regulation of
smoothened signaling pathway" evidence=IEA;ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA;ISO] [GO:0048557 "embryonic digestive tract
morphogenesis" evidence=IEA;ISO] [GO:0048598 "embryonic
morphogenesis" evidence=ISO] [GO:0048743 "positive regulation of
skeletal muscle fiber development" evidence=IEA;ISO] [GO:0050772
"positive regulation of axonogenesis" evidence=IEA;ISO] [GO:0060272
"embryonic skeletal joint morphogenesis" evidence=IEA;ISO]
[GO:0060351 "cartilage development involved in endochondral bone
morphogenesis" evidence=IEA;ISO] [GO:0060415 "muscle tissue
morphogenesis" evidence=IEA;ISO] [GO:2000172 "regulation of branching
morphogenesis of a nerve" evidence=IEA;ISO] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 RGD:3674
GO:GO:0005634 GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0030326 GO:GO:0050772
GO:GO:0032330 GO:GO:0001649 HOGENOM:HOG000231518 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GO:GO:0000976 GO:GO:0060272
GO:GO:0002053 GO:GO:0048743 GO:GO:0060351 GO:GO:0002063 GO:GO:0045880
GO:GO:0003209 GO:GO:0048557 GO:GO:0060415 GO:GO:2000172 CTD:6474
eggNOG:NOG113578 HOVERGEN:HBG007233 KO:K09331 OrthoDB:EOG41C6X2
GO:GO:0003170 EMBL:AJ002258 EMBL:AJ002259 EMBL:AJ002260
IPI:IPI00231489 IPI:IPI00559825 RefSeq:NP_037160.1 UniGene:Rn.11258
ProteinModelPortal:O35750 SMR:O35750 STRING:O35750 GeneID:25546
KEGG:rno:25546 UCSC:RGD:3674 InParanoid:O35750 NextBio:607081
Genevestigator:O35750 GermOnline:ENSRNOG00000012478 Uniprot:O35750
Length = 237
Score = 135 (52.6 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 30/77 (38%), Positives = 47/77 (61%)
Query: 117 TAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENSLL 176
T EQ+ E+E LF E+ +PD R++LS++LGL+ +V+ WFQNRR + + + EN L
Sbjct: 54 TLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCR----KQENQLH 109
Query: 177 KSEIEKLREENKAMREA 193
K + + +A R A
Sbjct: 110 KGVLIGAASQFEACRVA 126
>UNIPROTKB|O35750 [details] [associations]
symbol:Shox2 "Short stature homeobox protein 2"
species:10116 "Rattus norvegicus" [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 RGD:3674 GO:GO:0005634 GO:GO:0045944
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122
GO:GO:0030326 GO:GO:0050772 GO:GO:0032330 GO:GO:0001649
HOGENOM:HOG000231518 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GO:GO:0000976 GO:GO:0060272 GO:GO:0002053
GO:GO:0048743 GO:GO:0060351 GO:GO:0002063 GO:GO:0045880
GO:GO:0003209 GO:GO:0048557 GO:GO:0060415 GO:GO:2000172 CTD:6474
eggNOG:NOG113578 HOVERGEN:HBG007233 KO:K09331 OrthoDB:EOG41C6X2
GO:GO:0003170 EMBL:AJ002258 EMBL:AJ002259 EMBL:AJ002260
IPI:IPI00231489 IPI:IPI00559825 RefSeq:NP_037160.1 UniGene:Rn.11258
ProteinModelPortal:O35750 SMR:O35750 STRING:O35750 GeneID:25546
KEGG:rno:25546 UCSC:RGD:3674 InParanoid:O35750 NextBio:607081
Genevestigator:O35750 GermOnline:ENSRNOG00000012478 Uniprot:O35750
Length = 237
Score = 135 (52.6 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 30/77 (38%), Positives = 47/77 (61%)
Query: 117 TAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENSLL 176
T EQ+ E+E LF E+ +PD R++LS++LGL+ +V+ WFQNRR + + + EN L
Sbjct: 54 TLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCR----KQENQLH 109
Query: 177 KSEIEKLREENKAMREA 193
K + + +A R A
Sbjct: 110 KGVLIGAASQFEACRVA 126
>TAIR|locus:2170194 [details] [associations]
symbol:HAT14 "homeobox from Arabidopsis thaliana"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00340 SMART:SM00389 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 KO:K09338 HOGENOM:HOG000241612
EMBL:AP002032 EMBL:AJ431182 EMBL:BT005879 EMBL:AK227423 EMBL:U09334
IPI:IPI00522942 IPI:IPI00547278 PIR:T52367 RefSeq:NP_196289.2
RefSeq:NP_974743.1 UniGene:At.357 ProteinModelPortal:P46665
SMR:P46665 IntAct:P46665 PaxDb:P46665 PRIDE:P46665
EnsemblPlants:AT5G06710.1 GeneID:830560 KEGG:ath:AT5G06710
GeneFarm:3984 TAIR:At5g06710 eggNOG:NOG310615 InParanoid:P46665
OMA:KTSTPFY PhylomeDB:P46665 ProtClustDB:CLSN2917817
Genevestigator:P46665 Uniprot:P46665
Length = 336
Score = 139 (54.0 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 32/82 (39%), Positives = 47/82 (57%)
Query: 115 RHTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENS 174
R + +Q +E FKE + KQ+ L+KQL L PRQV+ WFQNRR + K Q +
Sbjct: 193 RLSKDQSAFLEDSFKEHSTLNPKQKIALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCE 252
Query: 175 LLKSEIEKLREENKAMREAINK 196
LK E L EEN+ +++ + +
Sbjct: 253 YLKRCCESLTEENRRLQKEVKE 274
>UNIPROTKB|G3X7M1 [details] [associations]
symbol:SHOX "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GO:GO:0000976 GeneTree:ENSGT00700000104279 KO:K09331 CTD:6473
OMA:SNHCPVH EMBL:DAAA02005893 RefSeq:NP_001178475.1
UniGene:Bt.106108 Ensembl:ENSBTAT00000038279 GeneID:615159
KEGG:bta:615159 NextBio:20899478 Uniprot:G3X7M1
Length = 306
Score = 138 (53.6 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 25/60 (41%), Positives = 42/60 (70%)
Query: 117 TAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENSLL 176
T EQ+ E+E LF E+ +PD R++LS++LGL+ +V+ WFQNRR + + + + NS++
Sbjct: 127 TLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQMHNSVI 186
>TAIR|locus:2171489 [details] [associations]
symbol:HAT2 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0009733 "response to auxin stimulus"
evidence=RCA;IMP] [GO:0009734 "auxin mediated signaling pathway"
evidence=IEP] [GO:0009826 "unidimensional cell growth"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0009641 "shade avoidance"
evidence=IEP] InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR006712 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 Pfam:PF04618 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00340 SMART:SM00389 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0045892 GO:GO:0009734
GO:GO:0003677 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009826 KO:K09338
HOGENOM:HOG000241612 GO:GO:0009641 EMBL:AB018117
ProtClustDB:CLSN2685891 EMBL:AB067629 EMBL:AJ431183 EMBL:AF428450
EMBL:AY052324 EMBL:AY061904 EMBL:U09335 IPI:IPI00526064 PIR:T52368
RefSeq:NP_199548.1 UniGene:At.25127 ProteinModelPortal:P46601
SMR:P46601 IntAct:P46601 STRING:P46601 EnsemblPlants:AT5G47370.1
GeneID:834784 KEGG:ath:AT5G47370 GeneFarm:3986 TAIR:At5g47370
eggNOG:NOG256142 InParanoid:P46601 OMA:IPINPWA PhylomeDB:P46601
Genevestigator:P46601 GermOnline:AT5G47370 Uniprot:P46601
Length = 283
Score = 137 (53.3 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 33/81 (40%), Positives = 48/81 (59%)
Query: 115 RHTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENS 174
R + +Q +E FKE + KQ+ L+K+L L RQV+ WFQNRR + K Q +
Sbjct: 133 RLSKDQSAFLEETFKEHNTLNPKQKLALAKKLNLTARQVEVWFQNRRARTKLKQTEVDCE 192
Query: 175 LLKSEIEKLREENKAM-REAI 194
LK +EKL EEN+ + +EA+
Sbjct: 193 YLKRCVEKLTEENRRLQKEAM 213
>TAIR|locus:2103396 [details] [associations]
symbol:HAT3 "homeobox-leucine zipper protein 3"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR006712 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 Pfam:PF04618
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00340 SMART:SM00389
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
EMBL:AL138646 KO:K09338 HOGENOM:HOG000241612
ProtClustDB:CLSN2683322 EMBL:U09338 EMBL:U09339 EMBL:AJ440781
EMBL:AY099565 EMBL:BT008713 IPI:IPI00525230 PIR:T47850 PIR:T52350
RefSeq:NP_191598.1 UniGene:At.21112 ProteinModelPortal:P46602
SMR:P46602 IntAct:P46602 EnsemblPlants:AT3G60390.1 GeneID:825210
KEGG:ath:AT3G60390 GeneFarm:3969 TAIR:At3g60390 eggNOG:NOG246006
InParanoid:P46602 OMA:IQNTWIN PhylomeDB:P46602
Genevestigator:P46602 GermOnline:AT3G60390 Uniprot:P46602
Length = 315
Score = 138 (53.6 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 31/82 (37%), Positives = 47/82 (57%)
Query: 115 RHTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENS 174
R + EQ +E FKE + KQ+ L+KQL L RQV+ WFQNRR + K Q +
Sbjct: 165 RLSKEQALVLEETFKEHSTLNPKQKMALAKQLNLRTRQVEVWFQNRRARTKLKQTEVDCE 224
Query: 175 LLKSEIEKLREENKAMREAINK 196
LK E L +EN+ +++ +++
Sbjct: 225 YLKRCCENLTDENRRLQKEVSE 246
>TAIR|locus:2137599 [details] [associations]
symbol:HAT22 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0009735 "response to cytokinin stimulus"
evidence=IEP] [GO:0006473 "protein acetylation" evidence=RCA]
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00340 SMART:SM00389 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009735 EMBL:AL035709
EMBL:AL161592 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 KO:K09338 HOGENOM:HOG000241612
EMBL:U09336 EMBL:U09337 EMBL:AJ441254 EMBL:BT002318 EMBL:AY087563
EMBL:M90417 IPI:IPI00522748 PIR:T06026 RefSeq:NP_195493.1
UniGene:At.23912 ProteinModelPortal:P46604 SMR:P46604 IntAct:P46604
EnsemblPlants:AT4G37790.1 GeneID:829935 KEGG:ath:AT4G37790
GeneFarm:3981 TAIR:At4g37790 eggNOG:NOG259949 InParanoid:P46604
OMA:TTERVVC PhylomeDB:P46604 ProtClustDB:CLSN2683864
Genevestigator:P46604 GermOnline:AT4G37790 Uniprot:P46604
Length = 278
Score = 135 (52.6 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 31/80 (38%), Positives = 46/80 (57%)
Query: 115 RHTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENS 174
R T +Q +E FK + KQ+Q L++QL L PRQV+ WFQNRR + K Q +
Sbjct: 129 RLTKQQSALLEDNFKLHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCE 188
Query: 175 LLKSEIEKLREENKAMREAI 194
LK E L +EN+ +++ +
Sbjct: 189 FLKKCCETLTDENRRLQKEL 208
>UNIPROTKB|H0YLI9 [details] [associations]
symbol:SHOX "Short stature homeobox protein" species:9606
"Homo sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 EMBL:BX004827
HGNC:HGNC:10853 ProteinModelPortal:H0YLI9 SMR:H0YLI9
Ensembl:ENST00000558872 Bgee:H0YLI9 Uniprot:H0YLI9
Length = 225
Score = 132 (51.5 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 26/61 (42%), Positives = 41/61 (67%)
Query: 117 TAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQI-KTIQERHENSL 175
T EQ+ E+E LF E+ +PD R++LS++LGL+ +V+ WFQNRR + K + H+ +
Sbjct: 125 TLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQMHKGVI 184
Query: 176 L 176
L
Sbjct: 185 L 185
>UNIPROTKB|F1NF72 [details] [associations]
symbol:F1NF72 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0009953
"dorsal/ventral pattern formation" evidence=IEA] [GO:0009954
"proximal/distal pattern formation" evidence=IEA] [GO:0030901
"midbrain development" evidence=IEA] [GO:0030902 "hindbrain
development" evidence=IEA] [GO:0030917 "midbrain-hindbrain boundary
development" evidence=IEA] [GO:0035115 "embryonic forelimb
morphogenesis" evidence=IEA] [GO:0043473 "pigmentation"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0048666 "neuron
development" evidence=IEA] InterPro:IPR000047 InterPro:IPR000747
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00026 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000976 GeneTree:ENSGT00680000099870
PROSITE:PS00033 InterPro:IPR019549 InterPro:IPR019737 Pfam:PF10525
EMBL:AADN02016916 IPI:IPI00812139 Ensembl:ENSGALT00000019794
OMA:ASNDEKR Uniprot:F1NF72
Length = 100
Score = 116 (45.9 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 21/49 (42%), Positives = 36/49 (73%)
Query: 117 TAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIK 165
TAEQ++ ++A F+ + + E++RQ L+++L L Q+K WFQN+R +IK
Sbjct: 11 TAEQLQRLKAEFQANRYITEQRRQSLAQELSLNESQIKIWFQNKRAKIK 59
>ZFIN|ZDB-GENE-040426-1457 [details] [associations]
symbol:shox2 "short stature homeobox 2"
species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0007507 "heart
development" evidence=IMP] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-040426-1457 GO:GO:0005634 GO:GO:0007507 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 HOGENOM:HOG000231518
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 GO:GO:0000976
GeneTree:ENSGT00700000104279 HSSP:P06601 CTD:6474 eggNOG:NOG113578
HOVERGEN:HBG007233 KO:K09331 OrthoDB:EOG41C6X2 EMBL:BX004974
EMBL:BC056324 EMBL:BC065345 IPI:IPI00491363 RefSeq:NP_957490.1
UniGene:Dr.26980 SMR:Q7SZN8 Ensembl:ENSDART00000009564
GeneID:394171 KEGG:dre:394171 InParanoid:Q7SZN8 NextBio:20815116
Uniprot:Q7SZN8
Length = 299
Score = 135 (52.6 bits), Expect = 6.8e-06, P = 6.8e-06
Identities = 30/77 (38%), Positives = 47/77 (61%)
Query: 117 TAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENSLL 176
T EQ+ E+E LF E+ +PD R++LS++LGL+ +V+ WFQNRR + + + EN L
Sbjct: 116 TLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCR----KQENQLH 171
Query: 177 KSEIEKLREENKAMREA 193
K + + +A R A
Sbjct: 172 KGVLIGAASQFEACRVA 188
>UNIPROTKB|F6Y4K5 [details] [associations]
symbol:SHOX2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GO:GO:0000976 GeneTree:ENSGT00700000104279 CTD:6474 KO:K09331
OMA:CTEAGRD EMBL:AAEX03013721 Ensembl:ENSCAFT00000014128
RefSeq:XP_003639881.1 GeneID:485732 KEGG:cfa:485732 Uniprot:F6Y4K5
Length = 319
Score = 135 (52.6 bits), Expect = 7.9e-06, P = 7.9e-06
Identities = 30/77 (38%), Positives = 47/77 (61%)
Query: 117 TAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENSLL 176
T EQ+ E+E LF E+ +PD R++LS++LGL+ +V+ WFQNRR + + + EN L
Sbjct: 148 TLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCR----KQENQLH 203
Query: 177 KSEIEKLREENKAMREA 193
K + + +A R A
Sbjct: 204 KGVLIGAASQFEACRVA 220
>UNIPROTKB|I3L828 [details] [associations]
symbol:SHOX2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:2000172 "regulation
of branching morphogenesis of a nerve" evidence=IEA] [GO:0060415
"muscle tissue morphogenesis" evidence=IEA] [GO:0060351 "cartilage
development involved in endochondral bone morphogenesis"
evidence=IEA] [GO:0060272 "embryonic skeletal joint morphogenesis"
evidence=IEA] [GO:0050772 "positive regulation of axonogenesis"
evidence=IEA] [GO:0048743 "positive regulation of skeletal muscle
fiber development" evidence=IEA] [GO:0048557 "embryonic digestive
tract morphogenesis" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045880 "positive regulation of smoothened signaling pathway"
evidence=IEA] [GO:0032330 "regulation of chondrocyte
differentiation" evidence=IEA] [GO:0030326 "embryonic limb
morphogenesis" evidence=IEA] [GO:0003209 "cardiac atrium
morphogenesis" evidence=IEA] [GO:0003170 "heart valve development"
evidence=IEA] [GO:0002063 "chondrocyte development" evidence=IEA]
[GO:0002053 "positive regulation of mesenchymal cell proliferation"
evidence=IEA] [GO:0001649 "osteoblast differentiation"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0030326
GO:GO:0050772 GO:GO:0032330 GO:GO:0001649 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GO:GO:0000976
GeneTree:ENSGT00700000104279 GO:GO:0060272 GO:GO:0002053
GO:GO:0048743 GO:GO:0060351 GO:GO:0002063 GO:GO:0045880
GO:GO:0003209 GO:GO:0048557 GO:GO:0060415 GO:GO:2000172 CTD:6474
KO:K09331 OMA:CTEAGRD GO:GO:0003170 EMBL:FP312663
RefSeq:NP_001230281.1 UniGene:Ssc.38718 Ensembl:ENSSSCT00000025053
GeneID:100628206 KEGG:ssc:100628206 Uniprot:I3L828
Length = 321
Score = 135 (52.6 bits), Expect = 8.1e-06, P = 8.1e-06
Identities = 30/77 (38%), Positives = 47/77 (61%)
Query: 117 TAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENSLL 176
T EQ+ E+E LF E+ +PD R++LS++LGL+ +V+ WFQNRR + + + EN L
Sbjct: 150 TLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCR----KQENQLH 205
Query: 177 KSEIEKLREENKAMREA 193
K + + +A R A
Sbjct: 206 KGVLIGAASQFEACRVA 222
>WB|WBGene00000430 [details] [associations]
symbol:ceh-5 species:6239 "Caenorhabditis elegans"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 EMBL:Z81036 PIR:S05706 PIR:T19335 RefSeq:NP_492586.2
ProteinModelPortal:P20269 SMR:P20269 EnsemblMetazoa:C16C2.1
GeneID:191616 KEGG:cel:CELE_C16C2.1 UCSC:C16C2.1 CTD:191616
WormBase:C16C2.1 eggNOG:NOG309408 GeneTree:ENSGT00680000099870
HOGENOM:HOG000017392 InParanoid:P20269 OMA:QNYWTAA NextBio:949690
Uniprot:P20269
Length = 134
Score = 115 (45.5 bits), Expect = 8.1e-06, P = 8.1e-06
Identities = 24/54 (44%), Positives = 33/54 (61%)
Query: 117 TAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQER 170
T EQ+ ++E F S + R +L++ LGL+ QVK WFQNRRT+ K I R
Sbjct: 43 TDEQLEKLEESFNTSGYLSGSTRAKLAESLGLSDNQVKVWFQNRRTKQKKIDSR 96
>FB|FBgn0085396 [details] [associations]
symbol:CG34367 species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:AE014134 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GO:GO:0000976 GeneTree:ENSGT00700000104279
UniGene:Dm.26780 GeneID:5740879 KEGG:dme:Dmel_CG34367
FlyBase:FBgn0085396 GenomeRNAi:5740879 NextBio:20891918
RefSeq:NP_001097140.1 ProteinModelPortal:A8DYR8 SMR:A8DYR8
EnsemblMetazoa:FBtr0112592 UCSC:CG34367-RC InParanoid:A8DYR8
OrthoDB:EOG4M640D PhylomeDB:A8DYR8 Bgee:A8DYR8 Uniprot:A8DYR8
Length = 420
Score = 137 (53.3 bits), Expect = 8.3e-06, P = 8.3e-06
Identities = 26/61 (42%), Positives = 43/61 (70%)
Query: 117 TAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENSLL 176
T +Q+ E+E LF+E+ +PD R++LS++LGL+ +V+ WFQNRR + + +HEN +
Sbjct: 200 TLDQLNELERLFEETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCR----KHENQMH 255
Query: 177 K 177
K
Sbjct: 256 K 256
>FB|FBgn0025334 [details] [associations]
symbol:PHDP "Putative homeodomain protein" species:7227
"Drosophila melanogaster" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 EMBL:AE013599 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:P06601
GeneTree:ENSGT00700000104256 FlyBase:FBgn0025334 EMBL:BT028839
RefSeq:NP_523834.1 UniGene:Dm.5689 SMR:Q9W1H7 IntAct:Q9W1H7
MINT:MINT-1561397 STRING:Q9W1H7 EnsemblMetazoa:FBtr0072224
GeneID:37788 KEGG:dme:Dmel_CG11182 UCSC:CG11182-RA CTD:37788
InParanoid:Q9W1H7 OMA:YKLRANE GenomeRNAi:37788 NextBio:805410
Uniprot:Q9W1H7
Length = 220
Score = 130 (50.8 bits), Expect = 8.6e-06, P = 8.6e-06
Identities = 25/67 (37%), Positives = 43/67 (64%)
Query: 117 TAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENSLL 176
T+ Q+ E+E +F E+ +PD R++++ +L L +V+ WFQNRR + + QERH ++
Sbjct: 120 TSNQLNELEKIFLETHYPDIYTREEIASKLHLTEARVQVWFQNRRAKFRK-QERHAIYIM 178
Query: 177 KSEIEKL 183
K + KL
Sbjct: 179 KDKSSKL 185
>UNIPROTKB|E1BLB9 [details] [associations]
symbol:E1BLB9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:2000172 "regulation
of branching morphogenesis of a nerve" evidence=IEA] [GO:0060415
"muscle tissue morphogenesis" evidence=IEA] [GO:0060351 "cartilage
development involved in endochondral bone morphogenesis"
evidence=IEA] [GO:0060272 "embryonic skeletal joint morphogenesis"
evidence=IEA] [GO:0050772 "positive regulation of axonogenesis"
evidence=IEA] [GO:0048743 "positive regulation of skeletal muscle
fiber development" evidence=IEA] [GO:0048557 "embryonic digestive
tract morphogenesis" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045880 "positive regulation of smoothened signaling pathway"
evidence=IEA] [GO:0032330 "regulation of chondrocyte
differentiation" evidence=IEA] [GO:0030326 "embryonic limb
morphogenesis" evidence=IEA] [GO:0003209 "cardiac atrium
morphogenesis" evidence=IEA] [GO:0003170 "heart valve development"
evidence=IEA] [GO:0002063 "chondrocyte development" evidence=IEA]
[GO:0002053 "positive regulation of mesenchymal cell proliferation"
evidence=IEA] [GO:0001649 "osteoblast differentiation"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0030326
GO:GO:0050772 GO:GO:0032330 GO:GO:0001649 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GO:GO:0000976
GeneTree:ENSGT00700000104279 GO:GO:0060272 GO:GO:0002053
GO:GO:0048743 GO:GO:0060351 GO:GO:0002063 GO:GO:0045880
GO:GO:0003209 GO:GO:0048557 GO:GO:0060415 GO:GO:2000172 OMA:CTEAGRD
GO:GO:0003170 EMBL:DAAA02002472 IPI:IPI00838807 UniGene:Bt.59425
Ensembl:ENSBTAT00000044731 NextBio:20874258 Uniprot:E1BLB9
Length = 331
Score = 135 (52.6 bits), Expect = 8.7e-06, P = 8.7e-06
Identities = 30/77 (38%), Positives = 47/77 (61%)
Query: 117 TAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENSLL 176
T EQ+ E+E LF E+ +PD R++LS++LGL+ +V+ WFQNRR + + + EN L
Sbjct: 148 TLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCR----KQENQLH 203
Query: 177 KSEIEKLREENKAMREA 193
K + + +A R A
Sbjct: 204 KGVLIGAASQFEACRVA 220
>UNIPROTKB|O60902 [details] [associations]
symbol:SHOX2 "Short stature homeobox protein 2"
species:9606 "Homo sapiens" [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0001649
"osteoblast differentiation" evidence=IEA] [GO:0002053 "positive
regulation of mesenchymal cell proliferation" evidence=IEA]
[GO:0002063 "chondrocyte development" evidence=IEA] [GO:0003170
"heart valve development" evidence=IEA] [GO:0003209 "cardiac atrium
morphogenesis" evidence=IEA] [GO:0030326 "embryonic limb
morphogenesis" evidence=IEA] [GO:0032330 "regulation of chondrocyte
differentiation" evidence=IEA] [GO:0045880 "positive regulation of
smoothened signaling pathway" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0048557 "embryonic digestive tract morphogenesis"
evidence=IEA] [GO:0048743 "positive regulation of skeletal muscle
fiber development" evidence=IEA] [GO:0050772 "positive regulation
of axonogenesis" evidence=IEA] [GO:0060272 "embryonic skeletal
joint morphogenesis" evidence=IEA] [GO:0060351 "cartilage
development involved in endochondral bone morphogenesis"
evidence=IEA] [GO:0060415 "muscle tissue morphogenesis"
evidence=IEA] [GO:2000172 "regulation of branching morphogenesis of
a nerve" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=TAS] [GO:0007399
"nervous system development" evidence=TAS] [GO:0007507 "heart
development" evidence=TAS] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0007399 GO:GO:0007507 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0001501 HOGENOM:HOG000231518
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 GO:GO:0000976
EMBL:AJ002367 EMBL:AJ002368 EMBL:BC008829 EMBL:AF022654
EMBL:AF023203 IPI:IPI00218369 IPI:IPI00295006 IPI:IPI00793628
RefSeq:NP_001157150.1 RefSeq:NP_003021.3 RefSeq:NP_006875.2
UniGene:Hs.55967 ProteinModelPortal:O60902 SMR:O60902 IntAct:O60902
STRING:O60902 PhosphoSite:O60902 PaxDb:O60902 PRIDE:O60902
DNASU:6474 Ensembl:ENST00000389589 Ensembl:ENST00000425436
GeneID:6474 KEGG:hsa:6474 UCSC:uc003fbr.3 UCSC:uc003fbs.3
UCSC:uc010hvw.3 CTD:6474 GeneCards:GC03M157813 HGNC:HGNC:10854
MIM:602504 neXtProt:NX_O60902 PharmGKB:PA35756 eggNOG:NOG113578
HOVERGEN:HBG007233 InParanoid:O60902 KO:K09331 OMA:CTEAGRD
OrthoDB:EOG41C6X2 GenomeRNAi:6474 NextBio:25151 ArrayExpress:O60902
Bgee:O60902 CleanEx:HS_SHOX2 Genevestigator:O60902
GermOnline:ENSG00000168779 Uniprot:O60902
Length = 331
Score = 135 (52.6 bits), Expect = 8.7e-06, P = 8.7e-06
Identities = 30/77 (38%), Positives = 47/77 (61%)
Query: 117 TAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENSLL 176
T EQ+ E+E LF E+ +PD R++LS++LGL+ +V+ WFQNRR + + + EN L
Sbjct: 148 TLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCR----KQENQLH 203
Query: 177 KSEIEKLREENKAMREA 193
K + + +A R A
Sbjct: 204 KGVLIGAASQFEACRVA 220
>MGI|MGI:1201673 [details] [associations]
symbol:Shox2 "short stature homeobox 2" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IDA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0001649 "osteoblast differentiation"
evidence=IMP] [GO:0002053 "positive regulation of mesenchymal cell
proliferation" evidence=IMP] [GO:0002062 "chondrocyte
differentiation" evidence=IMP] [GO:0002063 "chondrocyte
development" evidence=IMP] [GO:0003170 "heart valve development"
evidence=IMP] [GO:0003209 "cardiac atrium morphogenesis"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0030326 "embryonic limb morphogenesis" evidence=IMP]
[GO:0032330 "regulation of chondrocyte differentiation"
evidence=IMP] [GO:0035115 "embryonic forelimb morphogenesis"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045880 "positive regulation of smoothened
signaling pathway" evidence=IMP] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0048557 "embryonic digestive tract morphogenesis" evidence=IMP]
[GO:0048598 "embryonic morphogenesis" evidence=IMP] [GO:0048743
"positive regulation of skeletal muscle fiber development"
evidence=IMP] [GO:0050772 "positive regulation of axonogenesis"
evidence=IMP] [GO:0060272 "embryonic skeletal joint morphogenesis"
evidence=IMP] [GO:0060351 "cartilage development involved in
endochondral bone morphogenesis" evidence=IMP] [GO:0060415 "muscle
tissue morphogenesis" evidence=IMP] [GO:2000172 "regulation of
branching morphogenesis of a nerve" evidence=IMP]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 EMBL:U66918 MGI:MGI:1201673
GO:GO:0005634 GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0030326 GO:GO:0050772
GO:GO:0032330 GO:GO:0001649 HOGENOM:HOG000231518 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GO:GO:0000976
GeneTree:ENSGT00700000104279 GO:GO:0060272 GO:GO:0002053
GO:GO:0048743 GO:GO:0060351 GO:GO:0002063 GO:GO:0045880
GO:GO:0003209 GO:GO:0048557 GO:GO:0060415 GO:GO:2000172 CTD:6474
eggNOG:NOG113578 HOVERGEN:HBG007233 KO:K09331 OMA:CTEAGRD
OrthoDB:EOG41C6X2 EMBL:U67055 EMBL:U65071 EMBL:U65072
IPI:IPI00230342 IPI:IPI00625691 RefSeq:NP_038693.1 UniGene:Mm.39093
ProteinModelPortal:P70390 SMR:P70390 STRING:P70390
PhosphoSite:P70390 PRIDE:P70390 Ensembl:ENSMUST00000029422
Ensembl:ENSMUST00000162060 Ensembl:ENSMUST00000162439 GeneID:20429
KEGG:mmu:20429 UCSC:uc008pld.1 UCSC:uc008ple.1 InParanoid:P70390
NextBio:298446 Bgee:P70390 CleanEx:MM_SHOX2 Genevestigator:P70390
GermOnline:ENSMUSG00000027833 GO:GO:0003170 Uniprot:P70390
Length = 331
Score = 135 (52.6 bits), Expect = 8.7e-06, P = 8.7e-06
Identities = 30/77 (38%), Positives = 47/77 (61%)
Query: 117 TAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENSLL 176
T EQ+ E+E LF E+ +PD R++LS++LGL+ +V+ WFQNRR + + + EN L
Sbjct: 148 TLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCR----KQENQLH 203
Query: 177 KSEIEKLREENKAMREA 193
K + + +A R A
Sbjct: 204 KGVLIGAASQFEACRVA 220
>UNIPROTKB|E2QZN5 [details] [associations]
symbol:SHOX2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GO:GO:0000976 Ensembl:ENSCAFT00000014128 Uniprot:E2QZN5
Length = 334
Score = 135 (52.6 bits), Expect = 8.8e-06, P = 8.8e-06
Identities = 30/77 (38%), Positives = 47/77 (61%)
Query: 117 TAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENSLL 176
T EQ+ E+E LF E+ +PD R++LS++LGL+ +V+ WFQNRR + + + EN L
Sbjct: 151 TLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCR----KQENQLH 206
Query: 177 KSEIEKLREENKAMREA 193
K + + +A R A
Sbjct: 207 KGVLIGAASQFEACRVA 223
>TAIR|locus:2055028 [details] [associations]
symbol:HB4 "homeobox-leucine zipper protein 4"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS;IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009641 "shade
avoidance" evidence=IEP] [GO:0009725 "response to hormone stimulus"
evidence=IMP] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0010218
"response to far red light" evidence=IEP] InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR006712 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 Pfam:PF04618
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00340 SMART:SM00389
GO:GO:0009506 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0010218
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009725 EMBL:AC002388
KO:K09338 HOGENOM:HOG000241612 EMBL:Y09582 EMBL:AJ441251
IPI:IPI00540244 PIR:T00402 RefSeq:NP_182018.1 UniGene:At.44957
ProteinModelPortal:P92953 SMR:P92953 PaxDb:P92953 PRIDE:P92953
EnsemblPlants:AT2G44910.1 GeneID:819100 KEGG:ath:AT2G44910
GeneFarm:3965 TAIR:At2g44910 eggNOG:NOG279137 InParanoid:P92953
OMA:RGGDENE PhylomeDB:P92953 ProtClustDB:CLSN2683322
ArrayExpress:P92953 Genevestigator:P92953 GermOnline:AT2G44910
GO:GO:0009641 Uniprot:P92953
Length = 318
Score = 133 (51.9 bits), Expect = 8.9e-06, Sum P(2) = 8.9e-06
Identities = 30/82 (36%), Positives = 47/82 (57%)
Query: 115 RHTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENS 174
R + +Q +E FKE + KQ+ L+KQL L RQV+ WFQNRR + K Q +
Sbjct: 166 RLSKDQALVLEETFKEHSTLNPKQKLALAKQLNLRARQVEVWFQNRRARTKLKQTEVDCE 225
Query: 175 LLKSEIEKLREENKAMREAINK 196
LK + L EEN+ +++ +++
Sbjct: 226 YLKRCCDNLTEENRRLQKEVSE 247
Score = 44 (20.5 bits), Expect = 8.9e-06, Sum P(2) = 8.9e-06
Identities = 16/48 (33%), Positives = 23/48 (47%)
Query: 495 TTLQL--QCERLVFFMATNVPTKDSSGVATLAGRKSILKLAQRMT-WS 539
TTL + CER+ AT ++ T+ GR S QR+T W+
Sbjct: 265 TTLTMCPSCERVSSSAATVTAAPSTTTTPTVVGRPS----PQRLTPWT 308
>RGD|1586211 [details] [associations]
symbol:Hoxb8 "homeo box B8" species:10116 "Rattus norvegicus"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007625 "grooming behavior" evidence=ISO]
[GO:0008344 "adult locomotory behavior" evidence=ISO] [GO:0009952
"anterior/posterior pattern specification" evidence=ISO]
[GO:0019233 "sensory perception of pain" evidence=ISO] [GO:0021516
"dorsal spinal cord development" evidence=ISO] [GO:0045638
"negative regulation of myeloid cell differentiation"
evidence=ISO;ISS] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=ISO] [GO:0048705 "skeletal system
morphogenesis" evidence=ISO] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
RGD:1586211 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GO:GO:0045638 eggNOG:NOG314669 EMBL:M37565
IPI:IPI00476117 PIR:A43559 UniGene:Rn.231433
ProteinModelPortal:P18863 SMR:P18863 STRING:P18863 UCSC:RGD:1586211
Genevestigator:P18863 Uniprot:P18863
Length = 92
Score = 114 (45.2 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 27/67 (40%), Positives = 38/67 (56%)
Query: 120 QIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENSLLKSE 179
Q E+E F +P+ K+R ++S LGL RQVK WFQNRR + K + + K E
Sbjct: 22 QTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNKDKFPSSKCE 81
Query: 180 IEKLREE 186
E+L +E
Sbjct: 82 QEELEKE 88
>UNIPROTKB|F1S681 [details] [associations]
symbol:LHX4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0021526 "medial
motor column neuron differentiation" evidence=IEA] [GO:0009887
"organ morphogenesis" evidence=IEA] [GO:0008045 "motor neuron axon
guidance" evidence=IEA] [GO:0001890 "placenta development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009887 Gene3D:2.10.110.10
GO:GO:0008045 GeneTree:ENSGT00700000104177 GO:GO:0021526
OMA:LSFRDDQ EMBL:CU855640 EMBL:FP476046 Ensembl:ENSSSCT00000016925
Uniprot:F1S681
Length = 369
Score = 135 (52.6 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 45/163 (27%), Positives = 75/163 (46%)
Query: 117 TAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQE---RHEN 173
TA+Q+ ++ +K SP P R+QLS + GL R V+ WFQNRR + K +++ RH
Sbjct: 144 TAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKRLKKDAGRHRW 203
Query: 174 SLLKSEIEKLREENKAMREAINKACCPNCGMATTSRDTSMTTEEQQLRIENARLKAEVEK 233
+++ R +K +E+ +CG++ D+ ++ E Q+ E +
Sbjct: 204 GQFYKSVKRSRGSSKQEKES----SAEDCGVS----DSELSFREDQILSE----LGHTNR 251
Query: 234 LRAAVGKCPPGATSTSSCSAGNDQENRSSLDFYTGI-FGIDKS 275
+ VG G S S D +S D G +GI +S
Sbjct: 252 IYGNVGDVTGGQLMNGSFSM--DGTGQSYQDLRDGSPYGIPQS 292
>TAIR|locus:2144578 [details] [associations]
symbol:HB51 "homeobox 51" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;IDA] [GO:0009965 "leaf
morphogenesis" evidence=IMP] [GO:0010434 "bract formation"
evidence=IGI] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IGI] [GO:0048510 "regulation of timing of
transition from vegetative to reproductive phase" evidence=IGI]
[GO:0010582 "floral meristem determinacy" evidence=IGI] [GO:0048443
"stamen development" evidence=RCA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0045893 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
EMBL:AB005235 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009965
GO:GO:0048510 GO:GO:0010582 GO:GO:0000976 HOGENOM:HOG000006025
EMBL:AL162506 IPI:IPI00533817 IPI:IPI01019585 PIR:T48406
RefSeq:NP_195999.2 UniGene:At.54712 ProteinModelPortal:Q9LZR0
SMR:Q9LZR0 GeneID:831723 KEGG:ath:AT5G03790 GeneFarm:3983
TAIR:At5g03790 eggNOG:KOG0483 InParanoid:Q9LZR0 OMA:AHPRTEN
ArrayExpress:Q9LZR0 Genevestigator:Q9LZR0 GermOnline:AT5G03790
GO:GO:0010434 Uniprot:Q9LZR0
Length = 235
Score = 130 (50.8 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 27/82 (32%), Positives = 45/82 (54%)
Query: 115 RHTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENS 174
R T+ Q+ +E F+E D ++ +LS++LGL PRQ+ WFQNRR + K Q
Sbjct: 80 RLTSGQLASLERSFQEEIKLDSDRKVKLSRELGLQPRQIAVWFQNRRARWKAKQLEQLYD 139
Query: 175 LLKSEIEKLREENKAMREAINK 196
L+ E + + E + + + + K
Sbjct: 140 SLRQEYDVVSREKQMLHDEVKK 161
>UNIPROTKB|G3V2N9 [details] [associations]
symbol:NOBOX "Homeobox protein NOBOX" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000976 EMBL:AC004534 HGNC:HGNC:22448
ProteinModelPortal:G3V2N9 SMR:G3V2N9 Ensembl:ENST00000555556
ArrayExpress:G3V2N9 Bgee:G3V2N9 Uniprot:G3V2N9
Length = 166
Score = 119 (46.9 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 16/54 (29%), Positives = 40/54 (74%)
Query: 116 HTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQE 169
+ ++Q+ E+E +F+E +PD +R+++++ +G+ P+++ WFQNRR + + +++
Sbjct: 68 YRSDQLEELEKIFQEDHYPDSDKRREIAQTVGVTPQRIMVWFQNRRAKWRKMEK 121
>UNIPROTKB|Q969G2 [details] [associations]
symbol:LHX4 "LIM/homeobox protein Lhx4" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0001890 "placenta development" evidence=IEA]
[GO:0008045 "motor neuron axon guidance" evidence=IEA] [GO:0009887
"organ morphogenesis" evidence=IEA] [GO:0021526 "medial motor
column neuron differentiation" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009887
Gene3D:2.10.110.10 GO:GO:0008045 EMBL:AL139141 Orphanet:226307
Orphanet:95496 eggNOG:NOG275246 HOGENOM:HOG000231629 KO:K09374
HOVERGEN:HBG006263 OrthoDB:EOG4SBDZ0 GO:GO:0021526 EMBL:AY053457
EMBL:AF179849 EMBL:AF405430 EMBL:AF405425 EMBL:AF405426
EMBL:AF405427 EMBL:AF405428 EMBL:AF405429 EMBL:BC011759
EMBL:AB055703 EMBL:AB037683 EMBL:AF282899 EMBL:AH011598
IPI:IPI00169275 RefSeq:NP_203129.1 UniGene:Hs.658487
ProteinModelPortal:Q969G2 SMR:Q969G2 IntAct:Q969G2 STRING:Q969G2
DMDM:209572644 PRIDE:Q969G2 DNASU:89884 Ensembl:ENST00000263726
GeneID:89884 KEGG:hsa:89884 UCSC:uc001goe.2 CTD:89884
GeneCards:GC01P180199 HGNC:HGNC:21734 MIM:262700 MIM:602146
neXtProt:NX_Q969G2 Orphanet:85442 PharmGKB:PA134962876
InParanoid:Q969G2 OMA:LSFRDDQ PhylomeDB:Q969G2 GenomeRNAi:89884
NextBio:76401 ArrayExpress:Q969G2 Bgee:Q969G2 CleanEx:HS_LHX4
Genevestigator:Q969G2 GermOnline:ENSG00000121454 Uniprot:Q969G2
Length = 390
Score = 135 (52.6 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 45/163 (27%), Positives = 75/163 (46%)
Query: 117 TAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQE---RHEN 173
TA+Q+ ++ +K SP P R+QLS + GL R V+ WFQNRR + K +++ RH
Sbjct: 165 TAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKRLKKDAGRHRW 224
Query: 174 SLLKSEIEKLREENKAMREAINKACCPNCGMATTSRDTSMTTEEQQLRIENARLKAEVEK 233
+++ R +K +E+ +CG++ D+ ++ E Q+ E +
Sbjct: 225 GQFYKSVKRSRGSSKQEKES----SAEDCGVS----DSELSFREDQILSE----LGHTNR 272
Query: 234 LRAAVGKCPPGATSTSSCSAGNDQENRSSLDFYTGI-FGIDKS 275
+ VG G S S D +S D G +GI +S
Sbjct: 273 IYGNVGDVTGGQLMNGSFSM--DGTGQSYQDLRDGSPYGIPQS 313
>UNIPROTKB|H0YMR3 [details] [associations]
symbol:SHOX "Short stature homeobox protein" species:9606
"Homo sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 EMBL:BX004827
HGNC:HGNC:10853 ProteinModelPortal:H0YMR3 SMR:H0YMR3
Ensembl:ENST00000560001 Bgee:H0YMR3 Uniprot:H0YMR3
Length = 279
Score = 132 (51.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 26/61 (42%), Positives = 41/61 (67%)
Query: 117 TAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQI-KTIQERHENSL 175
T EQ+ E+E LF E+ +PD R++LS++LGL+ +V+ WFQNRR + K + H+ +
Sbjct: 125 TLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQMHKGVI 184
Query: 176 L 176
L
Sbjct: 185 L 185
>UNIPROTKB|F1P4U7 [details] [associations]
symbol:HOXD11 "Homeobox protein Hox-D11" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001656 "metanephros development" evidence=IEA]
[GO:0001658 "branching involved in ureteric bud morphogenesis"
evidence=IEA] [GO:0001759 "organ induction" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0009953 "dorsal/ventral pattern formation"
evidence=IEA] [GO:0009954 "proximal/distal pattern formation"
evidence=IEA] [GO:0010720 "positive regulation of cell development"
evidence=IEA] [GO:0032332 "positive regulation of chondrocyte
differentiation" evidence=IEA] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA] [GO:0048589 "developmental growth"
evidence=IEA] [GO:0060272 "embryonic skeletal joint morphogenesis"
evidence=IEA] [GO:0060351 "cartilage development involved in
endochondral bone morphogenesis" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0032332 GO:GO:0048589 GO:GO:0001759
GO:GO:0010720 GeneTree:ENSGT00700000104263 IPI:IPI00583692
EMBL:AADN02020032 Ensembl:ENSGALT00000015085 Uniprot:F1P4U7
Length = 109
Score = 113 (44.8 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 24/52 (46%), Positives = 35/52 (67%)
Query: 116 HTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTI 167
+T QIRE+E F + + ++++R QLS+ L L RQVK WFQNRR + K +
Sbjct: 44 YTKYQIRELEREFFFNVYINKEKRLQLSRMLNLTDRQVKIWFQNRRMKEKKL 95
>RGD|1595784 [details] [associations]
symbol:Hoxc9 "homeobox C9" species:10116 "Rattus norvegicus"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=IEA;ISO] [GO:0048706 "embryonic skeletal
system development" evidence=ISO] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 RGD:1595784 GO:GO:0007275
GO:GO:0005634 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
eggNOG:NOG314669 EMBL:S76301 EMBL:M37568 IPI:IPI01016344 PIR:D43559
UniGene:Rn.91646 ProteinModelPortal:P18866 SMR:P18866 STRING:P18866
UCSC:RGD:1595784 HOVERGEN:HBG107057 Genevestigator:P18866
Uniprot:P18866
Length = 108
Score = 113 (44.8 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 29/74 (39%), Positives = 43/74 (58%)
Query: 120 QIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENSLLKS- 178
Q E+E F +P+ K+R ++S LGL RQVK WFQNRR + K +E +++ L +
Sbjct: 26 QTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK--KENNKDKLPGAR 83
Query: 179 EIEKLREENKAMRE 192
+ EK+ EE E
Sbjct: 84 DEEKVEEEGNEEEE 97
>UNIPROTKB|P18866 [details] [associations]
symbol:Hoxc8 "Homeobox protein Hox-C8" species:10116
"Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
RGD:1595784 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 eggNOG:NOG314669 EMBL:S76301 EMBL:M37568
IPI:IPI01016344 PIR:D43559 UniGene:Rn.91646
ProteinModelPortal:P18866 SMR:P18866 STRING:P18866 UCSC:RGD:1595784
HOVERGEN:HBG107057 Genevestigator:P18866 Uniprot:P18866
Length = 108
Score = 113 (44.8 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 29/74 (39%), Positives = 43/74 (58%)
Query: 120 QIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENSLLKS- 178
Q E+E F +P+ K+R ++S LGL RQVK WFQNRR + K +E +++ L +
Sbjct: 26 QTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK--KENNKDKLPGAR 83
Query: 179 EIEKLREENKAMRE 192
+ EK+ EE E
Sbjct: 84 DEEKVEEEGNEEEE 97
>WB|WBGene00000434 [details] [associations]
symbol:ceh-9 species:6239 "Caenorhabditis elegans"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GeneTree:ENSGT00700000104206 EMBL:FO081483
EMBL:X52811 PIR:S13129 RefSeq:NP_001021797.1 UniGene:Cel.30778
ProteinModelPortal:P56407 SMR:P56407 EnsemblMetazoa:Y65B4BR.9
GeneID:267057 KEGG:cel:CELE_Y65B4BR.9 UCSC:Y65B4BR.9 CTD:267057
WormBase:Y65B4BR.9 eggNOG:NOG237842 InParanoid:P56407 OMA:FSGKQVF
NextBio:953494 Uniprot:P56407
Length = 147
Score = 113 (44.8 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 22/58 (37%), Positives = 34/58 (58%)
Query: 117 TAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENS 174
+ +Q+ E+E F+ + R +L+K+L + QVK WFQNRRT+ K I+ E S
Sbjct: 78 SGKQVFELEKQFEAKKYLSSSDRSELAKRLDVTETQVKIWFQNRRTKWKKIESEKERS 135
>UNIPROTKB|F1Q361 [details] [associations]
symbol:SHOX "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GO:GO:0000976 GeneTree:ENSGT00700000104279 OMA:SNHCPVH
EMBL:AAEX03026084 Ensembl:ENSCAFT00000017459 Uniprot:F1Q361
Length = 291
Score = 132 (51.5 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 26/61 (42%), Positives = 41/61 (67%)
Query: 117 TAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQI-KTIQERHENSL 175
T EQ+ E+E LF E+ +PD R++LS++LGL+ +V+ WFQNRR + K + H+ +
Sbjct: 124 TLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQMHKGVI 183
Query: 176 L 176
L
Sbjct: 184 L 184
>UNIPROTKB|O15266 [details] [associations]
symbol:SHOX "Short stature homeobox protein" species:9606
"Homo sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0001501 "skeletal system development" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0006366 GO:GO:0001501 HOGENOM:HOG000231518
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 GO:GO:0000976
Orphanet:137693 eggNOG:NOG113578 HOVERGEN:HBG007233 KO:K09331
OrthoDB:EOG41C6X2 EMBL:Y11536 EMBL:Y11535 EMBL:U82668 EMBL:U89331
EMBL:BX004827 IPI:IPI00005744 IPI:IPI00411417 RefSeq:NP_000442.1
RefSeq:NP_006874.1 UniGene:Hs.105932 ProteinModelPortal:O15266
SMR:O15266 IntAct:O15266 STRING:O15266 PhosphoSite:O15266
PRIDE:O15266 DNASU:6473 Ensembl:ENST00000334060
Ensembl:ENST00000381575 Ensembl:ENST00000381578
Ensembl:ENST00000554971 GeneID:6473 KEGG:hsa:6473 UCSC:uc004cph.1
UCSC:uc004cpi.3 CTD:6473 GeneCards:GC0XP000585 HGNC:HGNC:10853
MIM:127300 MIM:249700 MIM:300582 MIM:312865 MIM:400020
neXtProt:NX_O15266 Orphanet:2632 Orphanet:240 PharmGKB:PA134978644
InParanoid:O15266 OMA:SNHCPVH PhylomeDB:O15266 GenomeRNAi:6473
NextBio:25145 Bgee:O15266 CleanEx:HS_SHOX Genevestigator:O15266
Uniprot:O15266
Length = 292
Score = 132 (51.5 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 26/61 (42%), Positives = 41/61 (67%)
Query: 117 TAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQI-KTIQERHENSL 175
T EQ+ E+E LF E+ +PD R++LS++LGL+ +V+ WFQNRR + K + H+ +
Sbjct: 125 TLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQMHKGVI 184
Query: 176 L 176
L
Sbjct: 185 L 185
>UNIPROTKB|K7GS77 [details] [associations]
symbol:LOC100520816 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GeneTree:ENSGT00700000104279
EMBL:FP015869 GeneID:100520816 RefSeq:XP_003134962.1
Ensembl:ENSSSCT00000035048 Uniprot:K7GS77
Length = 292
Score = 132 (51.5 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 26/61 (42%), Positives = 41/61 (67%)
Query: 117 TAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQI-KTIQERHENSL 175
T EQ+ E+E LF E+ +PD R++LS++LGL+ +V+ WFQNRR + K + H+ +
Sbjct: 125 TLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQMHKGVI 184
Query: 176 L 176
L
Sbjct: 185 L 185
>UNIPROTKB|F1SG33 [details] [associations]
symbol:LOC100520816 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GO:GO:0000976 GeneTree:ENSGT00700000104279 KO:K09331 OMA:SNHCPVH
EMBL:FP015869 RefSeq:XP_003134961.1 Ensembl:ENSSSCT00000013224
GeneID:100520816 KEGG:ssc:100520816 Uniprot:F1SG33
Length = 300
Score = 132 (51.5 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 26/61 (42%), Positives = 41/61 (67%)
Query: 117 TAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQI-KTIQERHENSL 175
T EQ+ E+E LF E+ +PD R++LS++LGL+ +V+ WFQNRR + K + H+ +
Sbjct: 125 TLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQMHKGVI 184
Query: 176 L 176
L
Sbjct: 185 L 185
>ZFIN|ZDB-GENE-051030-21 [details] [associations]
symbol:shox "short stature homeobox" species:7955
"Danio rerio" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-051030-21 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00700000104279 EMBL:BX294669 IPI:IPI00742503
Ensembl:ENSDART00000029238 ArrayExpress:F1Q5T6 Bgee:F1Q5T6
Uniprot:F1Q5T6
Length = 304
Score = 132 (51.5 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 26/61 (42%), Positives = 41/61 (67%)
Query: 117 TAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQI-KTIQERHENSL 175
T EQ+ E+E LF E+ +PD R++LS++LGL+ +V+ WFQNRR + K + H+ +
Sbjct: 117 TLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQMHKGVI 176
Query: 176 L 176
L
Sbjct: 177 L 177
>UNIPROTKB|I3L383 [details] [associations]
symbol:HOXB8 "Homeobox protein Hox-B8" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 EMBL:AC103702 HGNC:HGNC:5119 Ensembl:ENST00000498634
Uniprot:I3L383
Length = 128
Score = 112 (44.5 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 29/72 (40%), Positives = 40/72 (55%)
Query: 120 QIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENSLLKSE 179
Q E+E F +P+ K+R ++S LGL RQVK WFQNRR + K + + K E
Sbjct: 6 QTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNKDKFPSSKCE 65
Query: 180 IEKLREENKAMR 191
E+L E+ K R
Sbjct: 66 QEEL-EKQKLER 76
>RGD|2320224 [details] [associations]
symbol:LOC100364841 "rCG53272-like" species:10116 "Rattus
norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:2320224 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00530000063899
IPI:IPI00959398 Ensembl:ENSRNOT00000035489 Uniprot:F1M524
Length = 96
Score = 112 (44.5 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 22/54 (40%), Positives = 34/54 (62%)
Query: 117 TAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQER 170
T Q+ EME LF+E+P+PD R +L++ L + +VK WF NRR + + + R
Sbjct: 20 TQWQVEEMENLFEETPYPDVLTRGELARTLNVPEVKVKVWFSNRRAKQRKNERR 73
>UNIPROTKB|F1MFM7 [details] [associations]
symbol:LHX4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0021526 "medial
motor column neuron differentiation" evidence=IEA] [GO:0009887
"organ morphogenesis" evidence=IEA] [GO:0008045 "motor neuron axon
guidance" evidence=IEA] [GO:0001890 "placenta development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009887 Gene3D:2.10.110.10
GO:GO:0008045 GeneTree:ENSGT00700000104177 KO:K09374 GO:GO:0021526
CTD:89884 OMA:LSFRDDQ EMBL:DAAA02043487 EMBL:DAAA02043488
EMBL:DAAA02043489 EMBL:DAAA02043490 IPI:IPI00695061
RefSeq:NP_001179714.1 UniGene:Bt.60930 Ensembl:ENSBTAT00000005216
GeneID:540797 KEGG:bta:540797 NextBio:20878839 Uniprot:F1MFM7
Length = 390
Score = 133 (51.9 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 45/163 (27%), Positives = 75/163 (46%)
Query: 117 TAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQE---RHEN 173
TA+Q+ ++ +K SP P R+QLS + GL R V+ WFQNRR + K +++ RH
Sbjct: 165 TAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKRLKKDAGRHRW 224
Query: 174 SLLKSEIEKLREENKAMREAINKACCPNCGMATTSRDTSMTTEEQQLRIENARLKAEVEK 233
+++ R +K +E+ +CG++ D+ ++ E Q+ E +
Sbjct: 225 GQFYKSVKRSRGGSKQEKES----SAEDCGVS----DSELSFREDQILSE----LGHTNR 272
Query: 234 LRAAVGKCPPGATSTSSCSAGNDQENRSSLDFYTGI-FGIDKS 275
+ VG G S S D +S D G +GI +S
Sbjct: 273 IYGNVGDVSGGQLMNGSFSM--DGTGQSYQDLRDGSPYGIPQS 313
>MGI|MGI:101776 [details] [associations]
symbol:Lhx4 "LIM homeobox protein 4" species:10090 "Mus
musculus" [GO:0001890 "placenta development" evidence=IGI]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IDA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008045 "motor neuron axon
guidance" evidence=IGI] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0009887 "organ morphogenesis" evidence=IMP]
[GO:0021526 "medial motor column neuron differentiation"
evidence=IGI] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 MGI:MGI:101776 GO:GO:0005634 GO:GO:0043066
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
GO:GO:0006351 GO:GO:0005622 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0009887 Gene3D:2.10.110.10 GO:GO:0008045 GO:GO:0001890
eggNOG:NOG275246 GeneTree:ENSGT00700000104177 HOGENOM:HOG000231629
KO:K09374 PDB:3MMK PDBsum:3MMK HOVERGEN:HBG006263 OrthoDB:EOG4SBDZ0
GO:GO:0021526 CTD:89884 OMA:LSFRDDQ EMBL:BC049834 EMBL:AF135415
EMBL:U89343 EMBL:S71659 IPI:IPI00134772 PIR:S46332
RefSeq:NP_034842.2 UniGene:Mm.103624 UniGene:Mm.351266
ProteinModelPortal:P53776 SMR:P53776 STRING:P53776 PRIDE:P53776
Ensembl:ENSMUST00000027740 GeneID:16872 KEGG:mmu:16872
UCSC:uc007dbn.2 InParanoid:P53776 NextBio:290842 Bgee:P53776
CleanEx:MM_LHX4 Genevestigator:P53776 GermOnline:ENSMUSG00000026468
Uniprot:P53776
Length = 390
Score = 133 (51.9 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 45/163 (27%), Positives = 75/163 (46%)
Query: 117 TAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQE---RHEN 173
TA+Q+ ++ +K SP P R+QLS + GL R V+ WFQNRR + K +++ RH
Sbjct: 165 TAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKRLKKDAGRHRW 224
Query: 174 SLLKSEIEKLREENKAMREAINKACCPNCGMATTSRDTSMTTEEQQLRIENARLKAEVEK 233
+++ R +K +E+ +CG++ D+ ++ E Q+ E +
Sbjct: 225 GQFYKSVKRSRGGSKQEKES----SAEDCGVS----DSELSFREDQILSE----LGHTNR 272
Query: 234 LRAAVGKCPPGATSTSSCSAGNDQENRSSLDFYTGI-FGIDKS 275
+ VG G S S D +S D G +GI +S
Sbjct: 273 IYGNVGDVTGGQLMNGSFSM--DGTGQSYQDLRDGSPYGIPQS 313
>UNIPROTKB|F1PCI5 [details] [associations]
symbol:LHX4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043066
"negative regulation of apoptotic process" evidence=IEA]
[GO:0021526 "medial motor column neuron differentiation"
evidence=IEA] [GO:0009887 "organ morphogenesis" evidence=IEA]
[GO:0008045 "motor neuron axon guidance" evidence=IEA] [GO:0001890
"placenta development" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009887
Gene3D:2.10.110.10 GO:GO:0008045 GeneTree:ENSGT00700000104177
GO:GO:0021526 OMA:LSFRDDQ EMBL:AAEX03005118 EMBL:AAEX03005119
Ensembl:ENSCAFT00000031328 Uniprot:F1PCI5
Length = 395
Score = 133 (51.9 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 45/163 (27%), Positives = 75/163 (46%)
Query: 117 TAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQE---RHEN 173
TA+Q+ ++ +K SP P R+QLS + GL R V+ WFQNRR + K +++ RH
Sbjct: 170 TAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKRLKKDAGRHRW 229
Query: 174 SLLKSEIEKLREENKAMREAINKACCPNCGMATTSRDTSMTTEEQQLRIENARLKAEVEK 233
+++ R +K +E+ +CG++ D+ ++ E Q+ E +
Sbjct: 230 GQFYKSVKRSRGGSKQEKES----SAEDCGVS----DSELSFREDQILSE----LGHTNR 277
Query: 234 LRAAVGKCPPGATSTSSCSAGNDQENRSSLDFYTGI-FGIDKS 275
+ VG G S S D +S D G +GI +S
Sbjct: 278 IYGNVGDVTGGQLMNGSFSM--DGTGQSYQDLRDGSPYGIPQS 318
>UNIPROTKB|F1NPY3 [details] [associations]
symbol:F1NPY3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001541 "ovarian follicle development"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00650000093445 EMBL:AADN02065142 EMBL:AADN02065141
IPI:IPI00584945 Ensembl:ENSGALT00000030041 OMA:GMIASCE
Uniprot:F1NPY3
Length = 204
Score = 124 (48.7 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 18/48 (37%), Positives = 37/48 (77%)
Query: 116 HTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQ 163
++AEQ+ E+E +F+E +PD ++R++++ +G+ P+++ WFQNRR +
Sbjct: 16 YSAEQLEELEKVFQEDRYPDNEKRREIAAVIGVTPQRIMVWFQNRRAK 63
>TAIR|locus:2168225 [details] [associations]
symbol:HB5 "homeobox protein 5" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;TAS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0009787
"regulation of abscisic acid mediated signaling pathway"
evidence=NAS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;IDA] [GO:0042803 "protein homodimerization activity"
evidence=IDA] [GO:0009737 "response to abscisic acid stimulus"
evidence=IMP;IDA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=TAS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0045893 GO:GO:0042803
GO:GO:0009738 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AB011479 GO:GO:0000976
HOGENOM:HOG000006025 EMBL:X67033 EMBL:AF325054 EMBL:AY074293
EMBL:AY091340 IPI:IPI00526581 PIR:S47135 RefSeq:NP_201334.1
UniGene:At.19698 UniGene:At.67842 ProteinModelPortal:P46667
SMR:P46667 STRING:P46667 EnsemblPlants:AT5G65310.1 GeneID:836656
KEGG:ath:AT5G65310 GeneFarm:3988 TAIR:At5g65310 eggNOG:NOG325574
InParanoid:P46667 OMA:PTSELAF PhylomeDB:P46667
ProtClustDB:CLSN2686460 Genevestigator:P46667 Uniprot:P46667
Length = 312
Score = 129 (50.5 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 25/73 (34%), Positives = 45/73 (61%)
Query: 119 EQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENSLLKS 178
EQ++ +E F+ + +++ +L+++LGL PRQV WFQNRR + KT Q + +LKS
Sbjct: 79 EQVKALEKNFEIDNKLEPERKVKLAQELGLQPRQVAIWFQNRRARWKTKQLERDYGVLKS 138
Query: 179 EIEKLREENKAMR 191
+ L+ +++
Sbjct: 139 NFDALKRNRDSLQ 151
>UNIPROTKB|F1NYF2 [details] [associations]
symbol:NKX6-2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0010454 "negative regulation of cell fate
commitment" evidence=IEA] [GO:0010455 "positive regulation of cell
fate commitment" evidence=IEA] [GO:0021912 "regulation of
transcription from RNA polymerase II promoter involved in spinal
cord motor neuron fate specification" evidence=IEA] [GO:0021913
"regulation of transcription from RNA polymerase II promoter
involved in ventral spinal cord interneuron specification"
evidence=IEA] [GO:0022010 "central nervous system myelination"
evidence=IEA] [GO:0031018 "endocrine pancreas development"
evidence=IEA] [GO:0045686 "negative regulation of glial cell
differentiation" evidence=IEA] [GO:0045687 "positive regulation of
glial cell differentiation" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0030154
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0000976
GeneTree:ENSGT00680000099625 GO:GO:0010455 GO:GO:0010454
EMBL:AADN02047157 EMBL:AADN02047158 IPI:IPI00600245
Ensembl:ENSGALT00000018301 Uniprot:F1NYF2
Length = 133
Score = 109 (43.4 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 30/89 (33%), Positives = 46/89 (51%)
Query: 117 TAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENSLL 176
+ +QI +E F+++ + +R +L+ LG+ QVK WFQNRRT+ + S
Sbjct: 31 SGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKRHAAEMASAK 90
Query: 177 K---SEIEKLREEN-KAMREAINKACCPN 201
K SE EKL+E + + NK PN
Sbjct: 91 KKHDSETEKLKESSDNEDDDEYNKPLDPN 119
>UNIPROTKB|H9L2C7 [details] [associations]
symbol:LHX4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001890
"placenta development" evidence=IEA] [GO:0008045 "motor neuron axon
guidance" evidence=IEA] [GO:0009887 "organ morphogenesis"
evidence=IEA] [GO:0021526 "medial motor column neuron
differentiation" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104177 EMBL:AADN02073379 EMBL:AADN02073380
Ensembl:ENSGALT00000035845 OMA:ERSWHSK Uniprot:H9L2C7
Length = 237
Score = 126 (49.4 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 28/85 (32%), Positives = 46/85 (54%)
Query: 117 TAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQE---RHEN 173
TA+Q+ ++ +K SP P R+QLS + GL R V+ WFQNRR + K +++ RH
Sbjct: 140 TAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKRLKKDAGRHRW 199
Query: 174 SLLKSEIEKLREENKAMREAINKAC 198
+++ R K +E+ + C
Sbjct: 200 GQFYKSVKRSRGAGKLEKESSAEDC 224
>TAIR|locus:2140055 [details] [associations]
symbol:HB16 "homeobox protein 16" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;NAS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;IDA] [GO:0009637
"response to blue light" evidence=IMP] [GO:0030308 "negative
regulation of cell growth" evidence=IMP] [GO:0048510 "regulation of
timing of transition from vegetative to reproductive phase"
evidence=IMP] [GO:0048573 "photoperiodism, flowering"
evidence=RCA;IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0045893 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0030308
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0009637
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0048510 GO:GO:0048573
EMBL:AL161596 GO:GO:0000976 EMBL:AL035708 KO:K09338
HOGENOM:HOG000006025 EMBL:AF076641 EMBL:AF370620 EMBL:AY054571
EMBL:AY128917 IPI:IPI00531709 PIR:G85474 PIR:T06112
RefSeq:NP_195716.1 UniGene:At.20863 ProteinModelPortal:Q940J1
SMR:Q940J1 PaxDb:Q940J1 PRIDE:Q940J1 EnsemblPlants:AT4G40060.1
GeneID:830169 KEGG:ath:AT4G40060 GeneFarm:3982 TAIR:At4g40060
eggNOG:NOG321520 InParanoid:Q940J1 OMA:CDSSAVL PhylomeDB:Q940J1
ProtClustDB:CLSN2685900 Genevestigator:Q940J1 Uniprot:Q940J1
Length = 294
Score = 128 (50.1 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 26/77 (33%), Positives = 46/77 (59%)
Query: 115 RHTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENS 174
R +Q++ +E F+ + +++ +L+++LGL PRQV WFQNRR + KT Q +
Sbjct: 62 RLKVDQVKALEKNFELENKLEPERKTKLAQELGLQPRQVAVWFQNRRARWKTKQLEKDYG 121
Query: 175 LLKSEIEKLREENKAMR 191
+LK + + LR ++R
Sbjct: 122 VLKGQYDSLRHNFDSLR 138
>ZFIN|ZDB-GENE-980526-216 [details] [associations]
symbol:eng1a "engrailed 1a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
InterPro:IPR000047 InterPro:IPR000747 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00026
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-980526-216 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GeneTree:ENSGT00680000099870 PROSITE:PS00033
HOVERGEN:HBG005975 InterPro:IPR019549 InterPro:IPR019737
Pfam:PF10525 EMBL:CABZ01070420 EMBL:BC080209 IPI:IPI00500053
UniGene:Dr.75072 SMR:Q68EL7 STRING:Q68EL7
Ensembl:ENSDART00000012506 InParanoid:Q68EL7 Uniprot:Q68EL7
Length = 231
Score = 125 (49.1 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 23/49 (46%), Positives = 37/49 (75%)
Query: 117 TAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIK 165
TAEQ++ ++A F+ S + E++RQ L+++LGL Q+K WFQN+R +IK
Sbjct: 151 TAEQLQRLKAEFQTSRYITEQRRQALARELGLNESQIKIWFQNKRAKIK 199
>UNIPROTKB|A8MWF9 [details] [associations]
symbol:MEOX1 "Homeobox protein MOX-1" species:9606 "Homo
sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0001757 "somite specification" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0071837 "HMG box domain
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0001757 EMBL:AC068675 EMBL:AC004149
RefSeq:NP_001035091.1 UniGene:Hs.438 DNASU:4222 GeneID:4222
KEGG:hsa:4222 CTD:4222 HGNC:HGNC:7013 PharmGKB:PA30747
HOGENOM:HOG000230987 KO:K09322 GenomeRNAi:4222 NextBio:16659
IPI:IPI00744956 ProteinModelPortal:A8MWF9 SMR:A8MWF9 STRING:A8MWF9
Ensembl:ENST00000393661 HOVERGEN:HBG100054 ArrayExpress:A8MWF9
Bgee:A8MWF9 Uniprot:A8MWF9
Length = 139
Score = 108 (43.1 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 22/52 (42%), Positives = 33/52 (63%)
Query: 117 TAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQ 168
T EQ+RE+EA F + +R +++ L L+ RQVK WFQNRR + K ++
Sbjct: 64 TKEQLRELEAEFAHHNYLTRLRRYEIAVNLDLSERQVKVWFQNRRMKWKRVK 115
>WB|WBGene00000439 [details] [associations]
symbol:ceh-16 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;IDA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0040015 "negative regulation of multicellular organism growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0009957 "epidermal cell fate specification" evidence=IMP]
[GO:0010172 "embryonic body morphogenesis" evidence=IMP]
[GO:0045026 "plasma membrane fusion" evidence=IGI;IMP] [GO:0048859
"formation of anatomical boundary" evidence=IMP] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009792
GO:GO:0043565 GO:GO:0045944 GO:GO:0040011 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000122 GO:GO:0040015 GO:GO:0000976 GO:GO:0010172
GO:GO:0009957 GO:GO:0048859 GeneTree:ENSGT00680000099870
EMBL:AY647457 EMBL:FO080380 PIR:S44752 PIR:T15488
RefSeq:NP_498898.2 UniGene:Cel.25260 ProteinModelPortal:P34326
SMR:P34326 STRING:P34326 EnsemblMetazoa:C13G5.1.1
EnsemblMetazoa:C13G5.1.2 GeneID:191618 KEGG:cel:CELE_C13G5.1
UCSC:C13G5.1 CTD:191618 WormBase:C13G5.1 eggNOG:NOG306728
HOGENOM:HOG000022417 InParanoid:P34326 OMA:PTFASPN NextBio:949698
GO:GO:0045026 PROSITE:PS00033 Uniprot:P34326
Length = 187
Score = 120 (47.3 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 21/49 (42%), Positives = 35/49 (71%)
Query: 117 TAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIK 165
T +Q+ ++ F+ES + EK+RQ+L+ +LGL Q+K WFQN+R ++K
Sbjct: 95 TGDQLDRLKTEFRESRYLTEKRRQELAHELGLNESQIKIWFQNKRAKLK 143
>TAIR|locus:2041283 [details] [associations]
symbol:HB6 "homeobox protein 6" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS;TAS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA;IDA]
[GO:0009414 "response to water deprivation" evidence=IEP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009738 "abscisic
acid mediated signaling pathway" evidence=TAS] [GO:0009788
"negative regulation of abscisic acid mediated signaling pathway"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0009269 "response to desiccation"
evidence=RCA] [GO:0009409 "response to cold" evidence=RCA]
[GO:0009651 "response to salt stress" evidence=RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=RCA] [GO:0042744
"hydrogen peroxide catabolic process" evidence=RCA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0045893 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0009738 GO:GO:0009414 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009788
EMBL:AC006592 GO:GO:0000976 KO:K09338 HOGENOM:HOG000006025
ProtClustDB:CLSN2685900 EMBL:X67034 EMBL:AY060569 EMBL:AY063819
EMBL:AY094457 EMBL:AY122903 EMBL:AF104900 IPI:IPI00548532
PIR:E84612 PIR:S47136 RefSeq:NP_565536.1 UniGene:At.25257
ProteinModelPortal:P46668 SMR:P46668 STRING:P46668
EnsemblPlants:AT2G22430.1 GeneID:816775 KEGG:ath:AT2G22430
GeneFarm:3962 TAIR:At2g22430 eggNOG:NOG255500 InParanoid:P46668
OMA:ESDISVK PhylomeDB:P46668 Genevestigator:P46668
GermOnline:AT2G22430 Uniprot:P46668
Length = 311
Score = 127 (49.8 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 26/77 (33%), Positives = 47/77 (61%)
Query: 115 RHTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENS 174
R + Q++ +E F+ + +++ +L+++LGL PRQV WFQNRR + KT Q +
Sbjct: 65 RLSINQVKALEKNFELENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLEKDYG 124
Query: 175 LLKSEIEKLREENKAMR 191
+LK++ + LR ++R
Sbjct: 125 VLKTQYDSLRHNFDSLR 141
>RGD|1586239 [details] [associations]
symbol:LOC691272 "similar to reproductive homeobox on X
chromosome, 11" species:10116 "Rattus norvegicus" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 Pfam:PF00046 PROSITE:PS50071 SMART:SM00389
RGD:1586239 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00530000063899
IPI:IPI00387867 Ensembl:ENSRNOT00000064531 Uniprot:F1M6S5
Length = 96
Score = 107 (42.7 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 19/51 (37%), Positives = 34/51 (66%)
Query: 119 EQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQE 169
EQ+ E++ +F+E+ +PD QR++L+K + + VK WF RR +I+ Q+
Sbjct: 22 EQLLELDRVFEETQYPDALQRKELAKLINVEEYTVKIWFNKRRAKIRKHQK 72
>UNIPROTKB|F1NFE6 [details] [associations]
symbol:SHOX "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001649 "osteoblast
differentiation" evidence=IEA] [GO:0002053 "positive regulation of
mesenchymal cell proliferation" evidence=IEA] [GO:0002063
"chondrocyte development" evidence=IEA] [GO:0003170 "heart valve
development" evidence=IEA] [GO:0003209 "cardiac atrium
morphogenesis" evidence=IEA] [GO:0030326 "embryonic limb
morphogenesis" evidence=IEA] [GO:0032330 "regulation of chondrocyte
differentiation" evidence=IEA] [GO:0045880 "positive regulation of
smoothened signaling pathway" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0048557 "embryonic digestive tract morphogenesis"
evidence=IEA] [GO:0048743 "positive regulation of skeletal muscle
fiber development" evidence=IEA] [GO:0050772 "positive regulation
of axonogenesis" evidence=IEA] [GO:0060272 "embryonic skeletal
joint morphogenesis" evidence=IEA] [GO:0060351 "cartilage
development involved in endochondral bone morphogenesis"
evidence=IEA] [GO:0060415 "muscle tissue morphogenesis"
evidence=IEA] [GO:2000172 "regulation of branching morphogenesis of
a nerve" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
Pfam:PF00046 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0032330
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GeneTree:ENSGT00700000104279 GO:GO:0002053 GO:GO:0048743
GO:GO:0045880 GO:GO:2000172 EMBL:AADN02017635 EMBL:AADN02017636
EMBL:AADN02017637 EMBL:AADN02017638 IPI:IPI00577004
Ensembl:ENSGALT00000026949 OMA:ARVQXVQ Uniprot:F1NFE6
Length = 221
Score = 123 (48.4 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 26/62 (41%), Positives = 41/62 (66%)
Query: 117 TAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVK-FWFQNRRTQI-KTIQERHENS 174
T EQ+ E+E LF E+ +PD R++LS++LGL+ +V+ WFQNRR + K + H+
Sbjct: 59 TLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQQVWFQNRRAKCRKQENQMHKGV 118
Query: 175 LL 176
+L
Sbjct: 119 IL 120
>UNIPROTKB|F1NVB2 [details] [associations]
symbol:TLX3 "T-cell leukemia homeobox protein 3"
species:9031 "Gallus gallus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0002087 "regulation of respiratory gaseous
exchange by neurological system process" evidence=IEA] [GO:0007417
"central nervous system development" evidence=IEA] [GO:0007585
"respiratory gaseous exchange" evidence=IEA] [GO:0045665 "negative
regulation of neuron differentiation" evidence=IEA] [GO:0048665
"neuron fate specification" evidence=IEA] [GO:0001764 "neuron
migration" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104454 EMBL:AADN02035942 IPI:IPI00814284
Ensembl:ENSGALT00000003427 OMA:LAFPIAR ArrayExpress:F1NVB2
Uniprot:F1NVB2
Length = 136
Score = 106 (42.4 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 27/84 (32%), Positives = 46/84 (54%)
Query: 120 QIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIK--TIQERHENSLLK 177
QI E+E F + +R L+K L + QVK WFQNRRT+ + T +ER
Sbjct: 22 QICELEKRFHRQKYLASAERAALAKSLKMTDAQVKTWFQNRRTKWRRQTAEEREAERQQA 81
Query: 178 SEIEKLREENKAMREAINKACCPN 201
S + L+ ++ A ++++N++ P+
Sbjct: 82 SRL-MLQLQHDAFQKSLNESIQPD 104
>ZFIN|ZDB-GENE-990415-108 [details] [associations]
symbol:hoxb8a "homeo box B8a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-990415-108 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GeneTree:ENSGT00700000104332 EMBL:BX927395
IPI:IPI00993559 Ensembl:ENSDART00000123837 ArrayExpress:E7FB54
Bgee:E7FB54 Uniprot:E7FB54
Length = 246
Score = 123 (48.4 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 28/74 (37%), Positives = 42/74 (56%)
Query: 120 QIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENSLLKSE 179
Q E+E F +P+ K+R ++S LGL RQVK WFQNRR + K + + KSE
Sbjct: 157 QTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNKDKFPSSKSE 216
Query: 180 IEKLREENKAMREA 193
E++ +E + +A
Sbjct: 217 QEQIEKEKREKEQA 230
>ZFIN|ZDB-GENE-980526-299 [details] [associations]
symbol:hhex "hematopoietically expressed homeobox"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0009953 "dorsal/ventral pattern formation"
evidence=IMP] [GO:0060217 "hemangioblast cell differentiation"
evidence=IMP] [GO:0045603 "positive regulation of endothelial cell
differentiation" evidence=IMP] [GO:0035162 "embryonic hemopoiesis"
evidence=IMP] [GO:0007507 "heart development" evidence=IMP]
[GO:0030878 "thyroid gland development" evidence=IMP] [GO:0046620
"regulation of organ growth" evidence=IMP] [GO:0009952
"anterior/posterior pattern specification" evidence=ISS]
[GO:0001889 "liver development" evidence=IMP] [GO:0048565
"digestive tract development" evidence=IMP] [GO:0007368
"determination of left/right symmetry" evidence=IMP] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-980526-299 GO:GO:0005634 GO:GO:0007507 GO:GO:0009952
GO:GO:0043565 GO:GO:0001889 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000122 GO:GO:0045603 GO:GO:0007368 GO:GO:0009953
GO:GO:0048565 GO:GO:0035162 eggNOG:NOG252905 GO:GO:0046620
GO:GO:0030878 CTD:3087 HOVERGEN:HBG055460 KO:K08024
OrthoDB:EOG4XKV7W EMBL:AF131070 IPI:IPI00485854 RefSeq:NP_571009.1
UniGene:Dr.79053 HSSP:P22808 ProteinModelPortal:Q9IAV3 SMR:Q9IAV3
STRING:Q9IAV3 GeneID:30098 KEGG:dre:30098 NextBio:20806580
Uniprot:Q9IAV3
Length = 228
Score = 122 (48.0 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 31/108 (28%), Positives = 56/108 (51%)
Query: 115 RHTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENS 174
R + +Q E+E F+ + +R++L+K L L+ RQVK WFQNRR + + +++ + S
Sbjct: 123 RFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRRLKQENPPS 182
Query: 175 LLKSEIEKLREENKAMREAINKACCPNCGMATTSRDTSMTTEEQQLRI 222
K E E + + + +A +A G +T S + +E Q +
Sbjct: 183 TGKREAED--SDTRRLSDAAARARELESGASTDSEELLDIEDEHQFTL 228
>ZFIN|ZDB-GENE-060728-1 [details] [associations]
symbol:lhx4 "LIM homeobox 4" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 ZFIN:ZDB-GENE-060728-1 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GeneTree:ENSGT00700000104177
HOGENOM:HOG000231629 KO:K09374 HOVERGEN:HBG006263 CTD:89884
OMA:LSFRDDQ EMBL:BX294388 EMBL:CR381643 EMBL:CT025732
IPI:IPI00616255 RefSeq:NP_001116445.1 UniGene:Dr.92005
Ensembl:ENSDART00000057644 GeneID:571943 KEGG:dre:571943
NextBio:20890768 Uniprot:B0S5S7
Length = 391
Score = 127 (49.8 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 27/80 (33%), Positives = 46/80 (57%)
Query: 117 TAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQE---RHEN 173
TA+Q+ +++ +K SP P R+QLS + GL R V+ WFQNRR + K +++ RH
Sbjct: 168 TAKQLETLKSAYKNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKRLKKDAGRHRW 227
Query: 174 SLLKSEIEKLREENKAMREA 193
+++ R +K +E+
Sbjct: 228 GQFYKSVKRNRGSSKTEKES 247
>UNIPROTKB|D6RBG8 [details] [associations]
symbol:PITX2 "Pituitary homeobox 2" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
HOGENOM:HOG000231518 EMBL:AC017068 HGNC:HGNC:9005 ChiTaRS:PITX2
IPI:IPI00967695 ProteinModelPortal:D6RBG8 SMR:D6RBG8
Ensembl:ENST00000511990 ArrayExpress:D6RBG8 Bgee:D6RBG8
Uniprot:D6RBG8
Length = 118
Score = 105 (42.0 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 18/62 (29%), Positives = 38/62 (61%)
Query: 117 TAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENSLL 176
T++Q++E+EA F+ + +PD R++++ L +V+ WF+NRR + + + + L
Sbjct: 47 TSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQAELC 106
Query: 177 KS 178
K+
Sbjct: 107 KN 108
>MGI|MGI:108011 [details] [associations]
symbol:Nobox "NOBOX oogenesis homeobox" species:10090 "Mus
musculus" [GO:0001541 "ovarian follicle development" evidence=IMP]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IMP] [GO:0005634 "nucleus" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IC] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0048477 "oogenesis" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 MGI:MGI:108011 GO:GO:0030154
GO:GO:0003677 GO:GO:0043565 GO:GO:0045944 GO:GO:0048477
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0005667 GO:GO:0001541 HSSP:P06601 CTD:135935 eggNOG:NOG325494
HOGENOM:HOG000113810 HOVERGEN:HBG082039 EMBL:AY061761 EMBL:BC125280
EMBL:BC125282 EMBL:U65067 IPI:IPI00129357 RefSeq:NP_570939.1
UniGene:Mm.17715 ProteinModelPortal:Q8VIH1 SMR:Q8VIH1 STRING:Q8VIH1
PhosphoSite:Q8VIH1 PRIDE:Q8VIH1 Ensembl:ENSMUST00000031749
GeneID:18291 KEGG:mmu:18291 UCSC:uc009bsp.1
GeneTree:ENSGT00650000093445 InParanoid:Q8VIH1 OMA:PLLMDVP
OrthoDB:EOG4JQ3X2 NextBio:293732 Bgee:Q8VIH1 CleanEx:MM_NOBOX
Genevestigator:Q8VIH1 GermOnline:ENSMUSG00000029736 Uniprot:Q8VIH1
Length = 527
Score = 128 (50.1 bits), Expect = 0.00012, P = 0.00012
Identities = 18/57 (31%), Positives = 41/57 (71%)
Query: 116 HTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHE 172
+ ++Q+ E+E +F+E +PD +R ++S+ +G+ P+++ WFQNRR + + +++ +E
Sbjct: 143 YRSDQLEELERIFQEDHYPDSDKRHEISQMVGVTPQRIMVWFQNRRAKWRKVEKLNE 199
>UNIPROTKB|F1P4U9 [details] [associations]
symbol:HOXD8 "Homeobox protein Hox-D8" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00700000104054 IPI:IPI00576774 EMBL:AADN02020025
EMBL:AADN02020026 EMBL:AADN02020027 EMBL:AADN02020028
EMBL:AADN02020029 EMBL:AADN02020030 Ensembl:ENSGALT00000015083
ArrayExpress:F1P4U9 Uniprot:F1P4U9
Length = 148
Score = 107 (42.7 bits), Expect = 0.00012, P = 0.00012
Identities = 28/73 (38%), Positives = 43/73 (58%)
Query: 120 QIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENSLLKSE 179
Q E+E F +P+ K+R ++S LGL RQVK WFQNRR + K +E +++ S+
Sbjct: 66 QTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK--KENNKDKFPASK 123
Query: 180 IEKLREENKAMRE 192
E +E +A +E
Sbjct: 124 QEG--KEGEAKKE 134
>MGI|MGI:1096343 [details] [associations]
symbol:Lhx8 "LIM homeobox protein 8" species:10090 "Mus
musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007611 "learning or memory" evidence=IMP] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008585 "female gonad development"
evidence=IMP] [GO:0021879 "forebrain neuron differentiation"
evidence=IMP] [GO:0021884 "forebrain neuron development"
evidence=IGI] [GO:0042475 "odontogenesis of dentin-containing
tooth" evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 MGI:MGI:1096343 GO:GO:0005634 GO:GO:0008585
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0007611
Gene3D:2.10.110.10 GO:GO:0042475 EMBL:CH466532 GO:GO:0021884
eggNOG:NOG264882 GeneTree:ENSGT00700000104050 HOGENOM:HOG000038965
HOVERGEN:HBG006261 KO:K09375 CTD:431707 OMA:MYWKSDQ
OrthoDB:EOG48WC27 EMBL:D49658 EMBL:AB007596 EMBL:AJ000338
EMBL:AK165733 EMBL:BC125281 EMBL:BC125283 EMBL:BC144768
IPI:IPI00132791 RefSeq:NP_034843.2 UniGene:Mm.15530
ProteinModelPortal:O35652 SMR:O35652 STRING:O35652
PhosphoSite:O35652 PRIDE:O35652 Ensembl:ENSMUST00000177846
GeneID:16875 KEGG:mmu:16875 InParanoid:Q3TMT2 NextBio:290860
Bgee:O35652 CleanEx:MM_LHX8 Genevestigator:O35652
GermOnline:ENSMUSG00000028201 Uniprot:O35652
Length = 367
Score = 125 (49.1 bits), Expect = 0.00014, P = 0.00014
Identities = 30/105 (28%), Positives = 53/105 (50%)
Query: 117 TAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKT-IQERHENSL 175
TA+Q++ M+A F + +PD + Q+L+++ GL+ R ++ WFQN R + K + H +S
Sbjct: 254 TADQLQVMQAQFAQDNNPDAQTLQKLAERTGLSRRVIQVWFQNCRARHKKHVSPNHSSSA 313
Query: 176 LKSEIEKLREENKAMREAINKACCPNCGMATTSRDTSMTTEEQQL 220
+ + R + E A P G T+ + M +Q L
Sbjct: 314 PVTAVPSSRLSPPMLEEMAYSAYVPQDGTMLTALHSYMDAHQQLL 358
>UNIPROTKB|G3V6V6 [details] [associations]
symbol:Lhx8 "RCG29002" species:10116 "Rattus norvegicus"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007611 "learning or memory" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008585 "female gonad development"
evidence=IEA] [GO:0021884 "forebrain neuron development"
evidence=IEA] [GO:0042475 "odontogenesis of dentin-containing
tooth" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 RGD:1308749 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GeneTree:ENSGT00700000104050 EMBL:CH473952
OMA:MYWKSDQ Ensembl:ENSRNOT00000009370 Uniprot:G3V6V6
Length = 367
Score = 125 (49.1 bits), Expect = 0.00014, P = 0.00014
Identities = 30/105 (28%), Positives = 53/105 (50%)
Query: 117 TAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKT-IQERHENSL 175
TA+Q++ M+A F + +PD + Q+L+++ GL+ R ++ WFQN R + K + H +S
Sbjct: 254 TADQLQVMQAQFAQDNNPDAQTLQKLAERTGLSRRVIQVWFQNCRARHKKHVSPNHSSSA 313
Query: 176 LKSEIEKLREENKAMREAINKACCPNCGMATTSRDTSMTTEEQQL 220
+ + R + E A P G T+ + M +Q L
Sbjct: 314 PVTAVPSSRLSPPMLEEMAYSAYVPQDGTMLTALHSYMDAHQQLL 358
>ZFIN|ZDB-GENE-980526-167 [details] [associations]
symbol:eng2a "engrailed 2a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0030901 "midbrain development" evidence=IGI] [GO:0009952
"anterior/posterior pattern specification" evidence=IGI]
[GO:0001708 "cell fate specification" evidence=IGI]
InterPro:IPR000047 InterPro:IPR000747 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00026
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-980526-167 GO:GO:0005634 GO:GO:0001708 GO:GO:0009952
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0030901 GO:GO:0000976
GeneTree:ENSGT00680000099870 eggNOG:NOG306728 PROSITE:PS00033
HOVERGEN:HBG005975 InterPro:IPR019549 InterPro:IPR019737
Pfam:PF10525 HOGENOM:HOG000247054 OrthoDB:EOG4H72D0 EMBL:X68151
EMBL:X68446 EMBL:X07622 EMBL:X59126 IPI:IPI00509115 PIR:A56557
PIR:S00562 RefSeq:NP_571119.2 UniGene:Dr.162132 UniGene:Dr.162307
UniGene:Dr.75073 ProteinModelPortal:P09015 SMR:P09015 STRING:P09015
Ensembl:ENSDART00000031700 GeneID:30243 KEGG:dre:30243 CTD:30243
InParanoid:P09015 OMA:ERHEECE NextBio:20806696 ArrayExpress:P09015
Bgee:P09015 Uniprot:P09015
Length = 265
Score = 122 (48.0 bits), Expect = 0.00014, P = 0.00014
Identities = 22/49 (44%), Positives = 37/49 (75%)
Query: 117 TAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIK 165
TAEQ++ ++A F+ + + E++RQ L+++LGL Q+K WFQN+R +IK
Sbjct: 184 TAEQLQRLKAEFQTNRYLTEQRRQSLAQELGLNESQIKIWFQNKRAKIK 232
>UNIPROTKB|E1C1I8 [details] [associations]
symbol:LOC100858967 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104263 EMBL:AADN02000990 EMBL:AADN02000991
EMBL:AADN02000992 EMBL:AADN02000993 IPI:IPI00818363
Ensembl:ENSGALT00000037817 ArrayExpress:E1C1I8 Uniprot:E1C1I8
Length = 203
Score = 118 (46.6 bits), Expect = 0.00017, P = 0.00017
Identities = 26/52 (50%), Positives = 35/52 (67%)
Query: 116 HTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTI 167
+T QIRE+E F S + ++++R QLS+ L L RQVK WFQNRR + K I
Sbjct: 138 YTKYQIRELEREFFFSVYINKEKRLQLSRMLNLTDRQVKIWFQNRRMKEKKI 189
>TAIR|locus:2046263 [details] [associations]
symbol:HB21 "homeobox protein 21" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0006950 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000976 KO:K09338 HSSP:P01366 EMBL:AC006135
EMBL:BT031362 IPI:IPI00520845 PIR:F84565 RefSeq:NP_179445.1
UniGene:At.52810 ProteinModelPortal:Q9ZU70 SMR:Q9ZU70
EnsemblPlants:AT2G18550.1 GeneID:816370 KEGG:ath:AT2G18550
GeneFarm:3961 TAIR:At2g18550 eggNOG:NOG270330 HOGENOM:HOG000034122
InParanoid:Q9ZU70 OMA:RVEDEYT PhylomeDB:Q9ZU70
ProtClustDB:CLSN2683051 ArrayExpress:Q9ZU70 Genevestigator:Q9ZU70
GermOnline:AT2G18550 Uniprot:Q9ZU70
Length = 220
Score = 119 (46.9 bits), Expect = 0.00017, P = 0.00017
Identities = 24/63 (38%), Positives = 39/63 (61%)
Query: 119 EQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENSLLKS 178
EQ+R +E F++ + +++ +L+ +LGL PRQV WFQNRR + K + E + LK+
Sbjct: 68 EQVRMLEISFEDDHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKRVEDEYTKLKN 127
Query: 179 EIE 181
E
Sbjct: 128 AYE 130
>WB|WBGene00020485 [details] [associations]
symbol:ceh-54 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 EMBL:FO080546 HSSP:P06601
GeneTree:ENSGT00700000104256 PIR:T16866 RefSeq:NP_509037.1
UniGene:Cel.367 ProteinModelPortal:Q22459 SMR:Q22459 DIP:DIP-24677N
IntAct:Q22459 MINT:MINT-1110113 EnsemblMetazoa:T13C5.4
GeneID:188474 KEGG:cel:CELE_T13C5.4 UCSC:T13C5.4 CTD:188474
WormBase:T13C5.4 eggNOG:NOG295926 HOGENOM:HOG000020434
InParanoid:Q22459 OMA:ATRDSEN NextBio:938936 Uniprot:Q22459
Length = 220
Score = 119 (46.9 bits), Expect = 0.00017, P = 0.00017
Identities = 29/100 (29%), Positives = 51/100 (51%)
Query: 118 AEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENSLLK 177
A QI EME +F E+ +PD R++L+ ++ L +V+ WFQNRR + + Q++ +
Sbjct: 53 ANQIDEMEKVFAENQYPDTMSREKLANKIQLHEERVQIWFQNRRAKYRREQKQTGHPYEP 112
Query: 178 SEIEKLRE-ENKAMREAINKACCPNCGMATTSRDTSMTTE 216
I K E + ++ + G + S DT ++ E
Sbjct: 113 PSITKNPTGEKEKTQDCTTLTSASSPGPSNLSNDTLVSIE 152
>UNIPROTKB|F1MXQ1 [details] [associations]
symbol:F1MXQ1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048666 "neuron
development" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0030902 "hindbrain development" evidence=IEA] [GO:0030901
"midbrain development" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] InterPro:IPR000047 InterPro:IPR000747
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00026 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0045944
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0048666 GO:GO:0030901 GO:GO:0030902
GO:GO:0000976 GeneTree:ENSGT00680000099870 EMBL:DAAA02012122
EMBL:DAAA02012123 IPI:IPI00718569 Ensembl:ENSBTAT00000028648
OMA:PSTHMEA Uniprot:F1MXQ1
Length = 186
Score = 116 (45.9 bits), Expect = 0.00018, P = 0.00018
Identities = 21/49 (42%), Positives = 36/49 (73%)
Query: 117 TAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIK 165
TAEQ++ ++A F+ + + E++RQ L+++L L Q+K WFQN+R +IK
Sbjct: 105 TAEQLQRLKAEFQTNRYLTEQRRQSLAQELSLNESQIKIWFQNKRAKIK 153
>UNIPROTKB|Q05917 [details] [associations]
symbol:EN2 "Homeobox protein engrailed-2" species:9031
"Gallus gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007411 "axon
guidance" evidence=IDA] [GO:0030426 "growth cone" evidence=IDA]
[GO:0030175 "filopodium" evidence=IDA] [GO:0030027 "lamellipodium"
evidence=IDA] [GO:0043005 "neuron projection" evidence=IDA]
[GO:0045727 "positive regulation of translation" evidence=IDA]
[GO:0042327 "positive regulation of phosphorylation" evidence=IDA]
InterPro:IPR000047 InterPro:IPR000747 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00026
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0007411 GO:GO:0003700 GO:GO:0030027
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0030175 GO:GO:0030426 GO:GO:0045727 GO:GO:0000976
GO:GO:0042327 PROSITE:PS00033 HOVERGEN:HBG005975 InterPro:IPR019549
InterPro:IPR019737 Pfam:PF10525 KO:K09319 EMBL:L12696 EMBL:L12697
IPI:IPI00579837 PIR:F48423 RefSeq:NP_001254648.1 UniGene:Gga.56328
GeneID:100859435 KEGG:gga:100859435 CTD:2020 Uniprot:Q05917
Length = 289
Score = 122 (48.0 bits), Expect = 0.00018, P = 0.00018
Identities = 22/49 (44%), Positives = 37/49 (75%)
Query: 117 TAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIK 165
TAEQ++ ++A F+ + + E++RQ L+++LGL Q+K WFQN+R +IK
Sbjct: 208 TAEQLQRLKAEFQTNRYLTEQRRQSLAQELGLNESQIKIWFQNKRAKIK 256
>UNIPROTKB|E2QXS9 [details] [associations]
symbol:HHEX "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0090009
"primitive streak formation" evidence=IEA] [GO:0071837 "HMG box
domain binding" evidence=IEA] [GO:0071103 "DNA conformation change"
evidence=IEA] [GO:0070491 "repressing transcription factor binding"
evidence=IEA] [GO:0070365 "hepatocyte differentiation"
evidence=IEA] [GO:0061017 "hepatoblast differentiation"
evidence=IEA] [GO:0061011 "hepatic duct development" evidence=IEA]
[GO:0061010 "gall bladder development" evidence=IEA] [GO:0061009
"common bile duct development" evidence=IEA] [GO:0060431 "primary
lung bud formation" evidence=IEA] [GO:0048853 "forebrain
morphogenesis" evidence=IEA] [GO:0048568 "embryonic organ
development" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0042127 "regulation of cell proliferation"
evidence=IEA] [GO:0035264 "multicellular organism growth"
evidence=IEA] [GO:0035050 "embryonic heart tube development"
evidence=IEA] [GO:0034504 "protein localization to nucleus"
evidence=IEA] [GO:0032993 "protein-DNA complex" evidence=IEA]
[GO:0031016 "pancreas development" evidence=IEA] [GO:0030878
"thyroid gland development" evidence=IEA] [GO:0030183 "B cell
differentiation" evidence=IEA] [GO:0030177 "positive regulation of
Wnt receptor signaling pathway" evidence=IEA] [GO:0022027
"interkinetic nuclear migration" evidence=IEA] [GO:0016973
"poly(A)+ mRNA export from nucleus" evidence=IEA] [GO:0008301 "DNA
binding, bending" evidence=IEA] [GO:0008190 "eukaryotic initiation
factor 4E binding" evidence=IEA] [GO:0007492 "endoderm development"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0002573 "myeloid leukocyte differentiation" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0005737
GO:GO:0007165 GO:GO:0043565 GO:GO:0001701 GO:GO:0045944
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0042127 GO:GO:0000122
GO:GO:0008301 GO:GO:0044212 GO:GO:0007049 GO:GO:0030183
GO:GO:0035264 GO:GO:0001570 GO:GO:0031016 GO:GO:0007492
GO:GO:0070365 GO:GO:0030177 GO:GO:0034504 GO:GO:0032993
GO:GO:0048568 GO:GO:0090009 GO:GO:0022027 GO:GO:0035050
GO:GO:0016973 GO:GO:0030878 GeneTree:ENSGT00680000099625
GO:GO:0048853 GO:GO:0061009 CTD:3087 KO:K08024 OMA:DNSCDQR
GO:GO:0071103 GO:GO:0061010 GO:GO:0061011 GO:GO:0061017
GO:GO:0002573 GO:GO:0060431 EMBL:AAEX03015414 RefSeq:XP_850204.1
Ensembl:ENSCAFT00000012018 GeneID:608175 KEGG:cfa:608175
NextBio:20893846 Uniprot:E2QXS9
Length = 270
Score = 121 (47.7 bits), Expect = 0.00019, P = 0.00019
Identities = 25/69 (36%), Positives = 42/69 (60%)
Query: 115 RHTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENS 174
R + +Q E+E F+ + +R++L+K L L+ RQVK WFQNRR + + +++ + S
Sbjct: 144 RFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRRLKQENPQS 203
Query: 175 LLKSEIEKL 183
K E+E L
Sbjct: 204 NKKEELESL 212
>UNIPROTKB|Q03014 [details] [associations]
symbol:HHEX "Hematopoietically-expressed homeobox protein
HHEX" species:9606 "Homo sapiens" [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0002573 "myeloid leukocyte
differentiation" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0007492 "endoderm development" evidence=IEA]
[GO:0009611 "response to wounding" evidence=IEA] [GO:0022027
"interkinetic nuclear migration" evidence=IEA] [GO:0030878 "thyroid
gland development" evidence=IEA] [GO:0031016 "pancreas development"
evidence=IEA] [GO:0035050 "embryonic heart tube development"
evidence=IEA] [GO:0035264 "multicellular organism growth"
evidence=IEA] [GO:0042127 "regulation of cell proliferation"
evidence=IEA] [GO:0043434 "response to peptide hormone stimulus"
evidence=IEA] [GO:0048568 "embryonic organ development"
evidence=IEA] [GO:0048853 "forebrain morphogenesis" evidence=IEA]
[GO:0060431 "primary lung bud formation" evidence=IEA] [GO:0061009
"common bile duct development" evidence=IEA] [GO:0061010 "gall
bladder development" evidence=IEA] [GO:0061011 "hepatic duct
development" evidence=IEA] [GO:0061017 "hepatoblast
differentiation" evidence=IEA] [GO:0070365 "hepatocyte
differentiation" evidence=IEA] [GO:0071837 "HMG box domain binding"
evidence=IEA] [GO:0090009 "primitive streak formation"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009952 "anterior/posterior pattern specification"
evidence=ISS] [GO:0030177 "positive regulation of Wnt receptor
signaling pathway" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0006406 "mRNA export from nucleus"
evidence=IDA] [GO:0007049 "cell cycle" evidence=IDA] [GO:0008190
"eukaryotic initiation factor 4E binding" evidence=IDA] [GO:0008283
"cell proliferation" evidence=IDA] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IDA] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0030154 "cell differentiation" evidence=IC]
[GO:0030183 "B cell differentiation" evidence=ISS] [GO:0016973
"poly(A)+ mRNA export from nucleus" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0070491
"repressing transcription factor binding" evidence=IDA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IDA;TAS]
[GO:0010944 "negative regulation of transcription by competitive
promoter binding" evidence=TAS] [GO:0017025 "TBP-class protein
binding" evidence=TAS] [GO:0034504 "protein localization to
nucleus" evidence=IDA] [GO:0010621 "negative regulation of
transcription by transcription factor localization" evidence=IC]
[GO:0032993 "protein-DNA complex" evidence=IDA] [GO:0008301 "DNA
binding, bending" evidence=IDA] [GO:0071103 "DNA conformation
change" evidence=IDA] [GO:0016525 "negative regulation of
angiogenesis" evidence=ISS] [GO:0030948 "negative regulation of
vascular endothelial growth factor receptor signaling pathway"
evidence=ISS] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0005737 GO:GO:0009611
GO:GO:0016055 GO:GO:0009952 GO:GO:0008283 EMBL:CH471066
GO:GO:0043565 GO:GO:0001701 GO:GO:0043434 GO:GO:0045944
GO:GO:0003700 GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0042127
GO:GO:0000122 GO:GO:0008301 GO:GO:0044212 GO:GO:0007049
GO:GO:0030183 GO:GO:0035264 GO:GO:0001570 GO:GO:0016525
GO:GO:0031016 GO:GO:0007492 GO:GO:0070365 GO:GO:0010944
GO:GO:0030177 eggNOG:NOG252905 GO:GO:0034504 GO:GO:0032993
GO:GO:0048568 GO:GO:0090009 GO:GO:0017025 GO:GO:0070491
GO:GO:0030948 GO:GO:0022027 GO:GO:0035050 GO:GO:0008190
GO:GO:0016973 GO:GO:0030878 EMBL:AL590080 GO:GO:0048853
GO:GO:0010621 GO:GO:0061009 CTD:3087 HOGENOM:HOG000049110
HOVERGEN:HBG055460 KO:K08024 OrthoDB:EOG4XKV7W EMBL:X67235
EMBL:L16499 EMBL:AK314891 EMBL:BC014336 EMBL:BC015110 EMBL:BC050638
EMBL:Z21533 IPI:IPI00008771 PIR:JN0767 RefSeq:NP_002720.1
UniGene:Hs.118651 PDB:2E1O PDBsum:2E1O ProteinModelPortal:Q03014
SMR:Q03014 IntAct:Q03014 MINT:MINT-1439118 STRING:Q03014
PhosphoSite:Q03014 DMDM:547658 PRIDE:Q03014 DNASU:3087
Ensembl:ENST00000282728 GeneID:3087 KEGG:hsa:3087 UCSC:uc001kid.3
GeneCards:GC10P094439 HGNC:HGNC:4901 MIM:604420 neXtProt:NX_Q03014
PharmGKB:PA29274 InParanoid:Q03014 OMA:DNSCDQR PhylomeDB:Q03014
EvolutionaryTrace:Q03014 GenomeRNAi:3087 NextBio:12253
ArrayExpress:Q03014 Bgee:Q03014 CleanEx:HS_HHEX
Genevestigator:Q03014 GermOnline:ENSG00000152804 GO:GO:0071103
GO:GO:0061010 GO:GO:0061011 GO:GO:0061017 GO:GO:0002573
GO:GO:0060431 Uniprot:Q03014
Length = 270
Score = 121 (47.7 bits), Expect = 0.00019, P = 0.00019
Identities = 25/69 (36%), Positives = 42/69 (60%)
Query: 115 RHTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENS 174
R + +Q E+E F+ + +R++L+K L L+ RQVK WFQNRR + + +++ + S
Sbjct: 143 RFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRRLKQENPQS 202
Query: 175 LLKSEIEKL 183
K E+E L
Sbjct: 203 NKKEELESL 211
>UNIPROTKB|H9L2H7 [details] [associations]
symbol:Gga.20677 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104054 EMBL:AADN02023992
Ensembl:ENSGALT00000035897 Uniprot:H9L2H7
Length = 95
Score = 102 (41.0 bits), Expect = 0.00020, P = 0.00020
Identities = 20/56 (35%), Positives = 33/56 (58%)
Query: 116 HTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERH 171
+T Q E+E F + + ++R ++SK + L RQVK WFQNRR ++K + +
Sbjct: 28 YTKHQTLELEKEFLFNMYLTRERRLEISKSINLTDRQVKIWFQNRRMKLKKMNREN 83
>UNIPROTKB|H9L2H8 [details] [associations]
symbol:Gga.20677 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104054 EMBL:AADN02023992
Ensembl:ENSGALT00000035898 Uniprot:H9L2H8
Length = 99
Score = 102 (41.0 bits), Expect = 0.00020, P = 0.00020
Identities = 20/56 (35%), Positives = 33/56 (58%)
Query: 116 HTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERH 171
+T Q E+E F + + ++R ++SK + L RQVK WFQNRR ++K + +
Sbjct: 32 YTKHQTLELEKEFLFNMYLTRERRLEISKSINLTDRQVKIWFQNRRMKLKKMNREN 87
>FB|FBgn0036274 [details] [associations]
symbol:CG4328 species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0048813 "dendrite morphogenesis" evidence=IMP] [GO:0006911
"phagocytosis, engulfment" evidence=IMP] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0006911 EMBL:AE014296 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0048813
GeneTree:ENSGT00700000104050 EMBL:BT050501 RefSeq:NP_648567.2
UniGene:Dm.27132 SMR:Q9VTW3 IntAct:Q9VTW3 MINT:MINT-301655
EnsemblMetazoa:FBtr0301071 GeneID:39405 KEGG:dme:Dmel_CG4328
UCSC:CG4328-RA FlyBase:FBgn0036274 InParanoid:Q9VTW3 OMA:ETNKENC
OrthoDB:EOG4B8GVN GenomeRNAi:39405 NextBio:813480 Uniprot:Q9VTW3
Length = 544
Score = 126 (49.4 bits), Expect = 0.00020, P = 0.00020
Identities = 38/163 (23%), Positives = 77/163 (47%)
Query: 119 EQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENSLLKS 178
+Q R +A F+ SP P K R+ L+K GL+ R V+ WFQN+R ++K IQ++ + +
Sbjct: 351 QQRRAFKASFEVSPKPCRKVRENLAKDTGLSLRIVQVWFQNQRAKVKKIQKKAK----QE 406
Query: 179 EIEKLREENKAMREAINKACCPNCGMATTSRDTSMTTEEQQLRIENARLKAEVEKLRAAV 238
K +++ +E+++ + +AT +D + + E QL + + ++R +
Sbjct: 407 PPSKGASDSQDSQESLDSS------LATKIKDEAHSDSESQLESPYSTTSDGLTRMRCTI 460
Query: 239 GKCPPGATSTSSCSAGNDQENRSSLDFYTGIFGIDKSRIMELV 281
K + + N++S I G+ + +L+
Sbjct: 461 -KDEQEQVPFNCMETNKENCNKNSEPILNTILGLSYATFQQLM 502
>UNIPROTKB|Q8UVR3 [details] [associations]
symbol:lmx1b.1 "LIM homeobox transcription factor 1-beta.1"
species:8355 "Xenopus laevis" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0030182 "neuron differentiation"
evidence=IMP] [GO:0039020 "pronephric nephron tubule development"
evidence=IMP] [GO:0072013 "glomus development" evidence=IEP;IMP]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0030182 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0072013
GO:GO:0039020 HOVERGEN:HBG052335 KO:K09371 EMBL:AF414086
RefSeq:NP_001083902.1 UniGene:Xl.12464 HSSP:P50480
ProteinModelPortal:Q8UVR3 GeneID:399182 KEGG:xla:399182 CTD:399182
Xenbase:XB-GENE-494754 Uniprot:Q8UVR3
Length = 400
Score = 124 (48.7 bits), Expect = 0.00020, P = 0.00020
Identities = 26/75 (34%), Positives = 43/75 (57%)
Query: 117 TAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENSLL 176
T +Q R +A F+ S P K R+ L+ + GL+ R V+ WFQN+R +IK + RH+
Sbjct: 226 TTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKIKKLARRHQQQQE 285
Query: 177 KSEIEKLREENKAMR 191
+ ++L +E + R
Sbjct: 286 QQNSQRLGQEVMSSR 300
>UNIPROTKB|F6USR4 [details] [associations]
symbol:MEOX2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001525 "angiogenesis" evidence=IEA] [GO:0001757 "somite
specification" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007519 "skeletal muscle tissue development" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0060021 "palate development" evidence=IEA] [GO:0060173 "limb
development" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0005737 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 EMBL:AADN02000860 EMBL:AADN02000861
EMBL:AADN02000862 EMBL:AADN02000863 EMBL:AADN02000864
IPI:IPI00821029 ProteinModelPortal:F6USR4
Ensembl:ENSGALT00000037944 ArrayExpress:F6USR4 Uniprot:F6USR4
Length = 154
Score = 109 (43.4 bits), Expect = 0.00021, P = 0.00021
Identities = 23/52 (44%), Positives = 32/52 (61%)
Query: 117 TAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQ 168
T EQIRE+EA F + +R +++ L L RQVK WFQNRR + K ++
Sbjct: 45 TKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWKRVK 96
>UNIPROTKB|Q6F2E2 [details] [associations]
symbol:vex1 "Homeobox protein vex1" species:8364 "Xenopus
(Silurana) tropicalis" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0030509 "BMP signaling pathway" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0048264 "determination of ventral identity" evidence=ISS]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0030509
GO:GO:0048264 HSSP:P06602 EMBL:AC149072 HOVERGEN:HBG094147
UniGene:Str.30175 ProteinModelPortal:Q6F2E2 Xenbase:XB-GENE-483077
Uniprot:Q6F2E2
Length = 282
Score = 121 (47.7 bits), Expect = 0.00022, P = 0.00022
Identities = 23/51 (45%), Positives = 35/51 (68%)
Query: 115 RHTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIK 165
+ TAEQ+ E+E FKE+ + ++++LSK L L+ Q+K WFQNRR + K
Sbjct: 135 KFTAEQLEELEKSFKENRYIGSSEKRRLSKVLKLSENQIKTWFQNRRMKFK 185
>RGD|1563929 [details] [associations]
symbol:Nobox "NOBOX oogenesis homeobox" species:10116 "Rattus
norvegicus" [GO:0001541 "ovarian follicle development"
evidence=IEA;ISO] [GO:0003677 "DNA binding" evidence=ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA;ISO] InterPro:IPR001356
InterPro:IPR009057 Pfam:PF00046 PROSITE:PS50071 SMART:SM00389
RGD:1563929 GO:GO:0005634 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0001541 EMBL:CH473959
CTD:135935 GeneTree:ENSGT00650000093445 OMA:PLLMDVP
OrthoDB:EOG4JQ3X2 IPI:IPI00394115 RefSeq:NP_001178942.1
UniGene:Rn.228183 Ensembl:ENSRNOT00000029651 GeneID:502759
KEGG:rno:502759 UCSC:RGD:1563929 NextBio:712378 Uniprot:D3ZXL8
Length = 524
Score = 125 (49.1 bits), Expect = 0.00024, P = 0.00024
Identities = 17/57 (29%), Positives = 41/57 (71%)
Query: 116 HTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHE 172
+ ++Q+ E+E +F+E +PD +R ++++ +G+ P+++ WFQNRR + + +++ +E
Sbjct: 142 YRSDQLEELERIFQEDHYPDSDKRHEIAQMVGVTPQRIMVWFQNRRAKWRKVEKLNE 198
>UNIPROTKB|P24341 [details] [associations]
symbol:HOXD10 "Homeobox protein Hox-D10" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 EMBL:D10287 IPI:IPI00593695
PIR:A37914 UniGene:Gga.20677 ProteinModelPortal:P24341 SMR:P24341
eggNOG:KOG0487 Uniprot:P24341
Length = 95
Score = 101 (40.6 bits), Expect = 0.00025, P = 0.00025
Identities = 20/56 (35%), Positives = 33/56 (58%)
Query: 116 HTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERH 171
+T Q E+E F + + ++R ++SK + L RQVK WFQNRR ++K + +
Sbjct: 28 YTKHQTLELEKEFLFNMYLTRERRLEISKSVNLTDRQVKIWFQNRRMKLKKMSREN 83
>UNIPROTKB|F1MCF6 [details] [associations]
symbol:CDX1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0060349 "bone
morphogenesis" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00530000063388 GO:GO:0000976 GO:GO:0060349
EMBL:DAAA02020624 IPI:IPI00867478 Ensembl:ENSBTAT00000015934
OMA:MTIKEEY Uniprot:F1MCF6
Length = 118
Score = 101 (40.6 bits), Expect = 0.00025, P = 0.00025
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 116 HTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHE 172
+T Q E+E F S + +++ +L+ LGL RQVK WFQNRR + + + ++ +
Sbjct: 14 YTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKERKVNKKQQ 70
>UNIPROTKB|F1PF43 [details] [associations]
symbol:VAX2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0060041
"retina development in camera-type eye" evidence=IEA] [GO:0048048
"embryonic eye morphogenesis" evidence=IEA] [GO:0031490 "chromatin
DNA binding" evidence=IEA] [GO:0030900 "forebrain development"
evidence=IEA] [GO:0009950 "dorsal/ventral axis specification"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0005737
GO:GO:0030900 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0060041
GO:GO:0007409 GO:GO:0048048 GO:GO:0000976 GO:GO:0031490
GO:GO:0009950 GeneTree:ENSGT00680000099870 OMA:LGEADHC
EMBL:AAEX03007653 EMBL:AAEX03007652 Ensembl:ENSCAFT00000005524
Uniprot:F1PF43
Length = 247
Score = 119 (46.9 bits), Expect = 0.00026, P = 0.00026
Identities = 27/75 (36%), Positives = 41/75 (54%)
Query: 117 TAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENSLL 176
TAEQ+ +E F+ + ++R +L++QL L+ QVK WFQNRRT+ K Q R
Sbjct: 67 TAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQKKDQSRDLEKRT 126
Query: 177 KSEIEKLREENKAMR 191
SE + + +R
Sbjct: 127 SSEASEAFATSNILR 141
>UNIPROTKB|G3V3J3 [details] [associations]
symbol:OTX2 "Homeobox protein OTX2" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 EMBL:AL161757 HGNC:HGNC:8522
ProteinModelPortal:G3V3J3 SMR:G3V3J3 Ensembl:ENST00000555804
ArrayExpress:G3V3J3 Bgee:G3V3J3 Uniprot:G3V3J3
Length = 163
Score = 111 (44.1 bits), Expect = 0.00026, P = 0.00026
Identities = 25/99 (25%), Positives = 55/99 (55%)
Query: 117 TAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENSLL 176
T Q+ +EALF ++ +PD R++++ ++ L +V+ WF+NRR + + Q++ +N
Sbjct: 46 TRAQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQQQQNGG- 104
Query: 177 KSEIEKLREENKAMREAINKACCPNCGMATTSRDTSMTT 215
++++ +++ RE +++ G T TS+ T
Sbjct: 105 QNKVRPAKKKTSPAREVSSES--GTSGQFTPPSSTSVPT 141
>ZFIN|ZDB-GENE-000223-14 [details] [associations]
symbol:phox2a "paired-like homeobox 2a" species:7955
"Danio rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007420 "brain development" evidence=IGI] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-000223-14 GO:GO:0005634
GO:GO:0007420 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GeneTree:ENSGT00700000104256 EMBL:CU633849
IPI:IPI00511129 Ensembl:ENSDART00000002384 Bgee:F1RCT9
Uniprot:F1RCT9
Length = 280
Score = 120 (47.3 bits), Expect = 0.00028, P = 0.00028
Identities = 24/62 (38%), Positives = 40/62 (64%)
Query: 117 TAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENSLL 176
T+ Q++E+E +F E+ +PD R++L+ ++ L +V+ WFQNRR + + QER NS
Sbjct: 100 TSSQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAKFRK-QERAANSKA 158
Query: 177 KS 178
S
Sbjct: 159 SS 160
>UNIPROTKB|E1C639 [details] [associations]
symbol:Gga.30007 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00700000104256
EMBL:AADN02006258 IPI:IPI00598714 Ensembl:ENSGALT00000020505
OMA:WRKHEKF Uniprot:E1C639
Length = 160
Score = 107 (42.7 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 19/47 (40%), Positives = 33/47 (70%)
Query: 117 TAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQ 163
TAEQ++E+E +F+ + +PD R QL+ ++ L +V+ WFQN+R +
Sbjct: 90 TAEQLQELEKIFQVTHYPDVHIRNQLAAKINLPEARVQIWFQNQRAK 136
Score = 37 (18.1 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 22 PALSLSLAGIFRGAGASAAAN 42
P+LS S+ I + AS +N
Sbjct: 12 PSLSFSIEEILKKPSASTTSN 32
>UNIPROTKB|J9NSM7 [details] [associations]
symbol:EN1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR000747 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00026
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00680000099870 PROSITE:PS00033 InterPro:IPR019549
InterPro:IPR019737 Pfam:PF10525 EMBL:AAEX03011883
Ensembl:ENSCAFT00000048402 OMA:IGPAHRE Uniprot:J9NSM7
Length = 194
Score = 115 (45.5 bits), Expect = 0.00031, P = 0.00031
Identities = 21/49 (42%), Positives = 36/49 (73%)
Query: 117 TAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIK 165
TAEQ++ ++A F+ + + E++RQ L+++L L Q+K WFQN+R +IK
Sbjct: 113 TAEQLQRLKAEFQANRYITEQRRQTLAQELSLNESQIKIWFQNKRAKIK 161
>UNIPROTKB|F1N4F7 [details] [associations]
symbol:LMX1B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0071542
"dopaminergic neuron differentiation" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0035265 "organ growth" evidence=IEA]
[GO:0035108 "limb morphogenesis" evidence=IEA] [GO:0030901
"midbrain development" evidence=IEA] [GO:0030199 "collagen fibril
organization" evidence=IEA] [GO:0021954 "central nervous system
neuron development" evidence=IEA] [GO:0021587 "cerebellum
morphogenesis" evidence=IEA] [GO:0009953 "dorsal/ventral pattern
formation" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0008219 "cell death" evidence=IEA] [GO:0002930
"trabecular meshwork development" evidence=IEA] [GO:0001764 "neuron
migration" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0001764 GO:GO:0046872 GO:GO:0008283 GO:GO:0008219
GO:GO:0071542 GO:GO:0043565 GO:GO:0008270 GO:GO:0030199
GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0043010 Gene3D:2.10.110.10 GO:GO:0030901 GO:GO:0035265
GO:GO:0009953 GO:GO:0021954 GO:GO:0035108
GeneTree:ENSGT00700000104050 GO:GO:0021587 OMA:NRMEGMM
EMBL:DAAA02032139 IPI:IPI00694069 Ensembl:ENSBTAT00000038767
Uniprot:F1N4F7
Length = 294
Score = 120 (47.3 bits), Expect = 0.00031, P = 0.00031
Identities = 24/70 (34%), Positives = 41/70 (58%)
Query: 117 TAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENSLL 176
T +Q R +A F+ S P K R+ L+ + GL+ R V+ WFQN+R ++K + RH+
Sbjct: 119 TTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKKLARRHQQQQE 178
Query: 177 KSEIEKLREE 186
+ ++L +E
Sbjct: 179 QQNSQRLGQE 188
>UNIPROTKB|F1RS26 [details] [associations]
symbol:LMX1B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0071542
"dopaminergic neuron differentiation" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0035265 "organ growth" evidence=IEA]
[GO:0035108 "limb morphogenesis" evidence=IEA] [GO:0030901
"midbrain development" evidence=IEA] [GO:0030199 "collagen fibril
organization" evidence=IEA] [GO:0021954 "central nervous system
neuron development" evidence=IEA] [GO:0021587 "cerebellum
morphogenesis" evidence=IEA] [GO:0009953 "dorsal/ventral pattern
formation" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0008219 "cell death" evidence=IEA] [GO:0002930
"trabecular meshwork development" evidence=IEA] [GO:0001764 "neuron
migration" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0001764 GO:GO:0046872 GO:GO:0008283 GO:GO:0008219
GO:GO:0071542 GO:GO:0043565 GO:GO:0008270 GO:GO:0030199
GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0043010 Gene3D:2.10.110.10 GO:GO:0030901 GO:GO:0035265
GO:GO:0009953 GO:GO:0021954 GO:GO:0035108
GeneTree:ENSGT00700000104050 GO:GO:0021587 OMA:NRMEGMM
EMBL:CU062602 Ensembl:ENSSSCT00000006164 Uniprot:F1RS26
Length = 294
Score = 120 (47.3 bits), Expect = 0.00031, P = 0.00031
Identities = 24/70 (34%), Positives = 41/70 (58%)
Query: 117 TAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENSLL 176
T +Q R +A F+ S P K R+ L+ + GL+ R V+ WFQN+R ++K + RH+
Sbjct: 119 TTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKKLARRHQQQQE 178
Query: 177 KSEIEKLREE 186
+ ++L +E
Sbjct: 179 QQNSQRLGQE 188
>UNIPROTKB|I3LRX4 [details] [associations]
symbol:I3LRX4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00660000095141 Ensembl:ENSSSCT00000029259 OMA:PVHVNRI
Uniprot:I3LRX4
Length = 116
Score = 100 (40.3 bits), Expect = 0.00033, P = 0.00033
Identities = 22/58 (37%), Positives = 34/58 (58%)
Query: 117 TAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENS 174
T+EQ+ E+E F + +R Q++ L L+ QVK WFQNRR + K ++ + NS
Sbjct: 10 TSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWKRVKAGNANS 67
>UNIPROTKB|P97273 [details] [associations]
symbol:TITF1 "Thyroid transcription factor 1" species:10141
"Cavia porcellus" [GO:0005654 "nucleoplasm" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007411 GO:GO:0021766 GO:GO:0001764
GO:GO:0045893 GO:GO:0005654 GO:GO:0033327 GO:GO:0043565
GO:GO:0006644 GO:GO:0045944 GO:GO:0007626 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0003705 GO:GO:0000122 GO:GO:0030336 GO:GO:0044212
GO:GO:0009725 GO:GO:0060510 GO:GO:0021983 GO:GO:0007492
GO:GO:0021877 GO:GO:0048709 GO:GO:0021759 GO:GO:0021892
GO:GO:0030512 GO:GO:0060441 GO:GO:0010719 GO:GO:0021795
GO:GO:0030878 GO:GO:0060430 GO:GO:0021798 GO:GO:0060486
eggNOG:NOG328614 HOGENOM:HOG000231923 HOVERGEN:HBG006689
GO:GO:0031128 GO:GO:0042696 EMBL:U82718 ProteinModelPortal:P97273
SMR:P97273 STRING:P97273 InParanoid:P97273 Uniprot:P97273
Length = 112
Score = 100 (40.3 bits), Expect = 0.00033, P = 0.00033
Identities = 18/46 (39%), Positives = 28/46 (60%)
Query: 120 QIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIK 165
Q+ E+E FK+ + +R+ L+ + L P QVK WFQN R ++K
Sbjct: 12 QVYELERRFKQQKYLSAPEREHLASMIHLTPTQVKIWFQNHRYKMK 57
>RGD|621233 [details] [associations]
symbol:Cdx1 "caudal type homeo box 1" species:10116 "Rattus
norvegicus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;TAS] [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007389
"pattern specification process" evidence=ISO] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA;ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA;ISO] [GO:0060349 "bone
morphogenesis" evidence=IEA;ISO] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:621233 GO:GO:0005634 GO:GO:0009952 GO:GO:0045944
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000976 GO:GO:0060349 eggNOG:NOG291290
HOGENOM:HOG000115975 HOVERGEN:HBG005302 OrthoDB:EOG42FSK7
EMBL:M91450 IPI:IPI00766495 PIR:S27397 ProteinModelPortal:Q05095
SMR:Q05095 STRING:Q05095 UCSC:RGD:621233 InParanoid:Q05095
ArrayExpress:Q05095 Genevestigator:Q05095
GermOnline:ENSRNOG00000018624 Uniprot:Q05095
Length = 123
Score = 100 (40.3 bits), Expect = 0.00033, P = 0.00033
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 116 HTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHE 172
+T Q E+E F S + +++ +L+ LGL RQVK WFQNRR + + + ++ +
Sbjct: 12 YTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKERKVNKKKQ 68
>UNIPROTKB|Q05095 [details] [associations]
symbol:Cdx1 "Homeobox protein CDX-1" species:10116 "Rattus
norvegicus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 RGD:621233
GO:GO:0005634 GO:GO:0009952 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GO:GO:0060349 eggNOG:NOG291290 HOGENOM:HOG000115975
HOVERGEN:HBG005302 OrthoDB:EOG42FSK7 EMBL:M91450 IPI:IPI00766495
PIR:S27397 ProteinModelPortal:Q05095 SMR:Q05095 STRING:Q05095
UCSC:RGD:621233 InParanoid:Q05095 ArrayExpress:Q05095
Genevestigator:Q05095 GermOnline:ENSRNOG00000018624 Uniprot:Q05095
Length = 123
Score = 100 (40.3 bits), Expect = 0.00033, P = 0.00033
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 116 HTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHE 172
+T Q E+E F S + +++ +L+ LGL RQVK WFQNRR + + + ++ +
Sbjct: 12 YTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKERKVNKKKQ 68
>SGD|S000000692 [details] [associations]
symbol:HMRA2 "Silenced copy of a2 at HMR" species:4932
"Saccharomyces cerevisiae" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA;IDA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 SGD:S000000692 GO:GO:0005634
GO:GO:0043565 EMBL:X59720 EMBL:BK006937 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 PIR:S19398
GeneTree:ENSGT00390000002531 KO:K09359 EMBL:AY693196
RefSeq:NP_010020.1 ProteinModelPortal:P0CY13 SMR:P0CY13
IntAct:P0CY13 EnsemblFungi:YCR096C GeneID:850458 KEGG:sce:YCR096C
CYGD:YCR096c NextBio:966090 ArrayExpress:P0CY13 GermOnline:YCR096C
Uniprot:P0CY13
Length = 119
Score = 100 (40.3 bits), Expect = 0.00033, P = 0.00033
Identities = 29/77 (37%), Positives = 41/77 (53%)
Query: 114 HRHTAEQIREMEALFK---ESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQER 170
HR T E +R +E+ F E+P+ D K + L K L+ Q+K W NRR + KTI
Sbjct: 43 HRFTKENVRILESWFAKNIENPYLDTKGLENLMKNTSLSRIQIKNWVSNRRRKEKTITIA 102
Query: 171 HENS-LLKSE-IEKLRE 185
E + LL E + K +E
Sbjct: 103 PELADLLSGEPLAKKKE 119
>UNIPROTKB|F1P1C8 [details] [associations]
symbol:MNX1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] [GO:0008045 "motor
neuron axon guidance" evidence=IEA] [GO:0009791 "post-embryonic
development" evidence=IEA] [GO:0021520 "spinal cord motor neuron
cell fate specification" evidence=IEA] [GO:0021675 "nerve
development" evidence=IEA] [GO:0021904 "dorsal/ventral neural tube
patterning" evidence=IEA] [GO:0031018 "endocrine pancreas
development" evidence=IEA] [GO:0060539 "diaphragm development"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00660000095141 OMA:YNSSDCS EMBL:AADN02000357
IPI:IPI00577112 Ensembl:ENSGALT00000010389 Uniprot:F1P1C8
Length = 348
Score = 121 (47.7 bits), Expect = 0.00034, P = 0.00034
Identities = 41/147 (27%), Positives = 73/147 (49%)
Query: 117 TAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENSLL 176
T++Q+ E+E FK + + +R +++ L L QVK WFQNRR + K ++ E +
Sbjct: 198 TSQQLLELEHQFKLNKYLSRPKRFEVATSLMLTETQVKIWFQNRRMKWKRSKKAKEQAAQ 257
Query: 177 KSEIEKLRE--ENKAMREAINKACCPNCGMATTSRDTSMTTEEQQLRIENARLKAEVEKL 234
++E +K E+KA E + P G R+ + E + E + E E+
Sbjct: 258 EAEKQKGGGGGEDKAAEELLLPG--PEKGGGRRLRELPDSEPEDE---E----EEEEEEE 308
Query: 235 RAAVGKCPPGATSTSSCSAGNDQENRS 261
A G+C P +S CS ++++++S
Sbjct: 309 EAEAGRCCP--YHSSDCSEADEEDSQS 333
>WB|WBGene00002988 [details] [associations]
symbol:lim-6 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0030421 "defecation"
evidence=IMP] [GO:0060756 "foraging behavior" evidence=IMP]
[GO:0030182 "neuron differentiation" evidence=IMP] [GO:0007409
"axonogenesis" evidence=IMP] [GO:0009449 "gamma-aminobutyric acid
biosynthetic process" evidence=IMP] [GO:0010468 "regulation of gene
expression" evidence=IMP] [GO:0061038 "uterus morphogenesis"
evidence=IMP] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0007409 GO:GO:0010468 GO:GO:0030421
GeneTree:ENSGT00700000104050 GO:GO:0009449 eggNOG:NOG243427
GO:GO:0061038 EMBL:FO080324 GeneID:180459 KEGG:cel:CELE_K03E6.1
CTD:180459 GO:GO:0060756 RefSeq:NP_001256980.1
ProteinModelPortal:Q21192 SMR:Q21192 PaxDb:Q21192
EnsemblMetazoa:K03E6.1b UCSC:K03E6.1 WormBase:K03E6.1b
HOGENOM:HOG000018451 InParanoid:Q21192 OMA:HGNIYCE NextBio:909480
ArrayExpress:Q21192 Uniprot:Q21192
Length = 316
Score = 120 (47.3 bits), Expect = 0.00036, P = 0.00036
Identities = 22/57 (38%), Positives = 37/57 (64%)
Query: 118 AEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENS 174
A+Q R+ + F+ S P K R+QL+ + GL+ R V+ WFQN+R +IK + ++ +S
Sbjct: 195 AQQRRQFKTAFERSSKPSRKVREQLANETGLSVRVVQVWFQNQRAKIKKLNKKDSDS 251
>UNIPROTKB|E1C654 [details] [associations]
symbol:VAX1 "Ventral anterior homeobox 1" species:9031
"Gallus gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GeneTree:ENSGT00680000099870 EMBL:AADN02030950
EMBL:AADN02030951 EMBL:AADN02030952 IPI:IPI00682449
Ensembl:ENSGALT00000033072 Uniprot:E1C654
Length = 219
Score = 116 (45.9 bits), Expect = 0.00038, P = 0.00038
Identities = 25/66 (37%), Positives = 44/66 (66%)
Query: 117 TAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENSLL 176
TAEQ+ +E F+ + ++R +L++QL L+ QVK WFQNRRT+ K +++ ++S L
Sbjct: 107 TAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQK--KDQGKDSEL 164
Query: 177 KSEIEK 182
+S + +
Sbjct: 165 RSVVSE 170
>UNIPROTKB|J9NU69 [details] [associations]
symbol:LMX1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104050 OMA:NRMEGMM EMBL:AAEX03006872
EMBL:AAEX03006873 Ensembl:ENSCAFT00000044276 Uniprot:J9NU69
Length = 327
Score = 120 (47.3 bits), Expect = 0.00039, P = 0.00039
Identities = 24/70 (34%), Positives = 41/70 (58%)
Query: 117 TAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENSLL 176
T +Q R +A F+ S P K R+ L+ + GL+ R V+ WFQN+R ++K + RH+
Sbjct: 159 TTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKKLARRHQQQQE 218
Query: 177 KSEIEKLREE 186
+ ++L +E
Sbjct: 219 QQNSQRLGQE 228
>UNIPROTKB|F1P5G0 [details] [associations]
symbol:VAX1 "Ventral anterior homeobox 1" species:9031
"Gallus gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GeneTree:ENSGT00680000099870 EMBL:AADN02030950
EMBL:AADN02030951 EMBL:AADN02030952 IPI:IPI01017344
Ensembl:ENSGALT00000015072 Uniprot:F1P5G0
Length = 220
Score = 116 (45.9 bits), Expect = 0.00039, P = 0.00039
Identities = 25/66 (37%), Positives = 44/66 (66%)
Query: 117 TAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENSLL 176
TAEQ+ +E F+ + ++R +L++QL L+ QVK WFQNRRT+ K +++ ++S L
Sbjct: 107 TAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQK--KDQGKDSEL 164
Query: 177 KSEIEK 182
+S + +
Sbjct: 165 RSVVSE 170
>UNIPROTKB|F1P169 [details] [associations]
symbol:DBX2 "Homeobox protein DBX2" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GeneTree:ENSGT00700000104097 EMBL:AADN02010005
EMBL:AADN02010006 IPI:IPI00822985 Ensembl:ENSGALT00000015650
ArrayExpress:F1P169 Uniprot:F1P169
Length = 156
Score = 108 (43.1 bits), Expect = 0.00041, P = 0.00041
Identities = 26/84 (30%), Positives = 48/84 (57%)
Query: 119 EQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENSLLKS 178
+Q + +E +F++ + + R++L+ LGL QVK WFQNRR + + +E+ L
Sbjct: 19 DQRKALEKMFQKQKYISKTDRKKLAINLGLKESQVKIWFQNRRMKWRNSKEKEV--LSNR 76
Query: 179 EIEKLREENKAMREAINKAC-CPN 201
+++ +EN + A+N A CP+
Sbjct: 77 CLQEGLQENYLSQSAMNFASPCPS 100
>UNIPROTKB|F1NFN6 [details] [associations]
symbol:DLX5 "Homeobox protein DLX-5" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001649
"osteoblast differentiation" evidence=IEA] [GO:0001958
"endochondral ossification" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0030326 "embryonic limb
morphogenesis" evidence=IEA] [GO:0030855 "epithelial cell
differentiation" evidence=IEA] [GO:0042472 "inner ear
morphogenesis" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0048646 "anatomical structure formation involved in
morphogenesis" evidence=IEA] [GO:0050679 "positive regulation of
epithelial cell proliferation" evidence=IEA] [GO:0060021 "palate
development" evidence=IEA] [GO:0060166 "olfactory pit development"
evidence=IEA] [GO:0060325 "face morphogenesis" evidence=IEA]
[GO:0071837 "HMG box domain binding" evidence=IEA] [GO:0090263
"positive regulation of canonical Wnt receptor signaling pathway"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0005737 GO:GO:0008283 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GO:GO:0090263 GO:GO:0050679
GeneTree:ENSGT00700000104439 EMBL:AC145963 IPI:IPI00821107
Ensembl:ENSGALT00000014862 ArrayExpress:F1NFN6 Uniprot:F1NFN6
Length = 77
Score = 99 (39.9 bits), Expect = 0.00042, P = 0.00042
Identities = 19/57 (33%), Positives = 36/57 (63%)
Query: 116 HTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHE 172
+++ Q+ ++ F+++ + +R +L+ LGL QVK WFQN+R++IK I + E
Sbjct: 14 YSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNKRSKIKKIMKNGE 70
>UNIPROTKB|O13004 [details] [associations]
symbol:GSC2 "Goosecoid 2" species:9031 "Gallus gallus"
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006357 Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:P06601
eggNOG:NOG244876 HOGENOM:HOG000112823 OrthoDB:EOG4RFKV2
GeneTree:ENSGT00700000104273 EMBL:AADN02043256 EMBL:Y09850
IPI:IPI00821873 Ensembl:ENSGALT00000038540 InParanoid:O13004
Uniprot:O13004
Length = 61
Score = 99 (39.9 bits), Expect = 0.00042, P = 0.00042
Identities = 19/52 (36%), Positives = 33/52 (63%)
Query: 114 HR--HTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQ 163
HR T EQ++ +E LF ++ +PD R+ L+ ++ L +V+ WF+NRR +
Sbjct: 4 HRTIFTEEQLQALETLFHQNQYPDVITREHLANRIHLKEERVEVWFKNRRAK 55
>UNIPROTKB|F1SC87 [details] [associations]
symbol:HHEX "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0090009 "primitive
streak formation" evidence=IEA] [GO:0071837 "HMG box domain
binding" evidence=IEA] [GO:0071103 "DNA conformation change"
evidence=IEA] [GO:0070491 "repressing transcription factor binding"
evidence=IEA] [GO:0070365 "hepatocyte differentiation"
evidence=IEA] [GO:0061017 "hepatoblast differentiation"
evidence=IEA] [GO:0061011 "hepatic duct development" evidence=IEA]
[GO:0061010 "gall bladder development" evidence=IEA] [GO:0061009
"common bile duct development" evidence=IEA] [GO:0060431 "primary
lung bud formation" evidence=IEA] [GO:0048853 "forebrain
morphogenesis" evidence=IEA] [GO:0048568 "embryonic organ
development" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0042127 "regulation of cell proliferation"
evidence=IEA] [GO:0035264 "multicellular organism growth"
evidence=IEA] [GO:0035050 "embryonic heart tube development"
evidence=IEA] [GO:0034504 "protein localization to nucleus"
evidence=IEA] [GO:0032993 "protein-DNA complex" evidence=IEA]
[GO:0031016 "pancreas development" evidence=IEA] [GO:0030878
"thyroid gland development" evidence=IEA] [GO:0030183 "B cell
differentiation" evidence=IEA] [GO:0030177 "positive regulation of
Wnt receptor signaling pathway" evidence=IEA] [GO:0022027
"interkinetic nuclear migration" evidence=IEA] [GO:0016973
"poly(A)+ mRNA export from nucleus" evidence=IEA] [GO:0008301 "DNA
binding, bending" evidence=IEA] [GO:0008190 "eukaryotic initiation
factor 4E binding" evidence=IEA] [GO:0007492 "endoderm development"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0002573 "myeloid leukocyte differentiation" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0005737
GO:GO:0007165 GO:GO:0043565 GO:GO:0001701 GO:GO:0045944
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0042127 GO:GO:0000122
GO:GO:0008301 GO:GO:0044212 GO:GO:0007049 GO:GO:0030183
GO:GO:0035264 GO:GO:0001570 GO:GO:0031016 GO:GO:0007492
GO:GO:0070365 GO:GO:0030177 GO:GO:0034504 GO:GO:0032993
GO:GO:0048568 GO:GO:0090009 GO:GO:0022027 GO:GO:0035050
GO:GO:0016973 GO:GO:0030878 GeneTree:ENSGT00680000099625
GO:GO:0048853 GO:GO:0061009 CTD:3087 KO:K08024 OMA:DNSCDQR
GO:GO:0071103 GO:GO:0061010 GO:GO:0061011 GO:GO:0061017
GO:GO:0002573 GO:GO:0060431 EMBL:CU467586 RefSeq:NP_001231508.1
UniGene:Ssc.15862 Ensembl:ENSSSCT00000011460 GeneID:397232
KEGG:ssc:397232 Uniprot:F1SC87
Length = 269
Score = 118 (46.6 bits), Expect = 0.00042, P = 0.00042
Identities = 24/69 (34%), Positives = 42/69 (60%)
Query: 115 RHTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENS 174
R + +Q E+E F+ + +R++L+K L L+ RQVK WFQNRR + + +++ + +
Sbjct: 143 RFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRRLKQENPQN 202
Query: 175 LLKSEIEKL 183
K E+E L
Sbjct: 203 NKKEELESL 211
>UNIPROTKB|A7YWK1 [details] [associations]
symbol:HHEX "HHEX protein" species:9913 "Bos taurus"
[GO:0005634 "nucleus" evidence=IEA] [GO:0090009 "primitive streak
formation" evidence=IEA] [GO:0071837 "HMG box domain binding"
evidence=IEA] [GO:0071103 "DNA conformation change" evidence=IEA]
[GO:0070491 "repressing transcription factor binding" evidence=IEA]
[GO:0070365 "hepatocyte differentiation" evidence=IEA] [GO:0061017
"hepatoblast differentiation" evidence=IEA] [GO:0061011 "hepatic
duct development" evidence=IEA] [GO:0061010 "gall bladder
development" evidence=IEA] [GO:0061009 "common bile duct
development" evidence=IEA] [GO:0060431 "primary lung bud formation"
evidence=IEA] [GO:0048853 "forebrain morphogenesis" evidence=IEA]
[GO:0048568 "embryonic organ development" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0042127 "regulation of
cell proliferation" evidence=IEA] [GO:0035264 "multicellular
organism growth" evidence=IEA] [GO:0035050 "embryonic heart tube
development" evidence=IEA] [GO:0034504 "protein localization to
nucleus" evidence=IEA] [GO:0032993 "protein-DNA complex"
evidence=IEA] [GO:0031016 "pancreas development" evidence=IEA]
[GO:0030878 "thyroid gland development" evidence=IEA] [GO:0030183
"B cell differentiation" evidence=IEA] [GO:0030177 "positive
regulation of Wnt receptor signaling pathway" evidence=IEA]
[GO:0022027 "interkinetic nuclear migration" evidence=IEA]
[GO:0016973 "poly(A)+ mRNA export from nucleus" evidence=IEA]
[GO:0008301 "DNA binding, bending" evidence=IEA] [GO:0008190
"eukaryotic initiation factor 4E binding" evidence=IEA] [GO:0007492
"endoderm development" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0002573 "myeloid leukocyte
differentiation" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001570 "vasculogenesis"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0005737 GO:GO:0007165
GO:GO:0043565 GO:GO:0001701 GO:GO:0045944 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0042127 GO:GO:0000122 GO:GO:0008301
GO:GO:0044212 GO:GO:0007049 GO:GO:0030183 GO:GO:0035264
GO:GO:0001570 GO:GO:0031016 GO:GO:0007492 GO:GO:0070365
GO:GO:0030177 eggNOG:NOG252905 GO:GO:0034504 GO:GO:0032993
GO:GO:0048568 GO:GO:0090009 GO:GO:0022027 GO:GO:0035050
GO:GO:0016973 GO:GO:0030878 GeneTree:ENSGT00680000099625
GO:GO:0048853 GO:GO:0061009 CTD:3087 HOGENOM:HOG000049110
HOVERGEN:HBG055460 KO:K08024 OrthoDB:EOG4XKV7W OMA:DNSCDQR
GO:GO:0071103 GO:GO:0061010 GO:GO:0061011 GO:GO:0061017
GO:GO:0002573 GO:GO:0060431 EMBL:DAAA02058821 EMBL:BC134632
IPI:IPI00712870 RefSeq:NP_001098894.1 UniGene:Bt.27920 SMR:A7YWK1
Ensembl:ENSBTAT00000018899 GeneID:539542 KEGG:bta:539542
InParanoid:A7YWK1 NextBio:20878060 Uniprot:A7YWK1
Length = 271
Score = 118 (46.6 bits), Expect = 0.00043, P = 0.00043
Identities = 24/69 (34%), Positives = 42/69 (60%)
Query: 115 RHTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENS 174
R + +Q E+E F+ + +R++L+K L L+ RQVK WFQNRR + + +++ + +
Sbjct: 145 RFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRRLKQENPQN 204
Query: 175 LLKSEIEKL 183
K E+E L
Sbjct: 205 NKKEELESL 213
>RGD|619932 [details] [associations]
symbol:Hhex "hematopoietically expressed homeobox" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO;IDA]
[GO:0001570 "vasculogenesis" evidence=IEA;ISO] [GO:0001701 "in
utero embryonic development" evidence=IEA;ISO] [GO:0001889 "liver
development" evidence=ISO] [GO:0002009 "morphogenesis of an
epithelium" evidence=ISO] [GO:0002573 "myeloid leukocyte
differentiation" evidence=IEA;ISO] [GO:0003682 "chromatin binding"
evidence=IEA;ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0005634
"nucleus" evidence=ISO;IDA;TAS] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0006406 "mRNA export from
nucleus" evidence=ISO] [GO:0007049 "cell cycle" evidence=IEA;ISO]
[GO:0007165 "signal transduction" evidence=IEA;ISO] [GO:0007492
"endoderm development" evidence=IEA;ISO] [GO:0008134 "transcription
factor binding" evidence=ISO] [GO:0008190 "eukaryotic initiation
factor 4E binding" evidence=IEA;ISO] [GO:0008283 "cell
proliferation" evidence=ISO] [GO:0008301 "DNA binding, bending"
evidence=IEA;ISO] [GO:0009611 "response to wounding" evidence=IEP]
[GO:0009887 "organ morphogenesis" evidence=ISO] [GO:0009952
"anterior/posterior pattern specification" evidence=ISO]
[GO:0016525 "negative regulation of angiogenesis" evidence=ISO;IDA]
[GO:0016973 "poly(A)+ mRNA export from nucleus" evidence=IEA;ISO]
[GO:0022027 "interkinetic nuclear migration" evidence=IEA;ISO]
[GO:0030097 "hemopoiesis" evidence=ISO;TAS] [GO:0030154 "cell
differentiation" evidence=IDA] [GO:0030177 "positive regulation of
Wnt receptor signaling pathway" evidence=IEA;ISO] [GO:0030183 "B
cell differentiation" evidence=IEA;ISO] [GO:0030878 "thyroid gland
development" evidence=IEA;ISO] [GO:0030900 "forebrain development"
evidence=ISO] [GO:0030948 "negative regulation of vascular
endothelial growth factor receptor signaling pathway"
evidence=ISO;IDA] [GO:0031016 "pancreas development"
evidence=IEA;ISO] [GO:0032993 "protein-DNA complex"
evidence=IEA;ISO] [GO:0034504 "protein localization to nucleus"
evidence=IEA;ISO] [GO:0035050 "embryonic heart tube development"
evidence=IEA;ISO] [GO:0035264 "multicellular organism growth"
evidence=IEA;ISO] [GO:0042127 "regulation of cell proliferation"
evidence=IEA;ISO] [GO:0042803 "protein homodimerization activity"
evidence=IEA;ISO] [GO:0043434 "response to peptide hormone
stimulus" evidence=IEP] [GO:0043565 "sequence-specific DNA binding"
evidence=ISO;IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO;IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA;ISO] [GO:0048568 "embryonic organ
development" evidence=IEA;ISO] [GO:0048729 "tissue morphogenesis"
evidence=ISO] [GO:0048853 "forebrain morphogenesis"
evidence=IEA;ISO] [GO:0060431 "primary lung bud formation"
evidence=IEA;ISO] [GO:0061009 "common bile duct development"
evidence=IEA;ISO] [GO:0061010 "gall bladder development"
evidence=IEA;ISO] [GO:0061011 "hepatic duct development"
evidence=IEA;ISO] [GO:0061017 "hepatoblast differentiation"
evidence=IEA;ISO] [GO:0070365 "hepatocyte differentiation"
evidence=IEA;ISO] [GO:0070491 "repressing transcription factor
binding" evidence=IEA;ISO] [GO:0071103 "DNA conformation change"
evidence=IEA;ISO] [GO:0071837 "HMG box domain binding"
evidence=IEA;ISO] [GO:0090009 "primitive streak formation"
evidence=IEA;ISO] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:619932 GO:GO:0005634 GO:GO:0005737 GO:GO:0007165
GO:GO:0030154 GO:GO:0009611 GO:GO:0043565 GO:GO:0001701
GO:GO:0043434 GO:GO:0045944 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0042127 GO:GO:0000122 GO:GO:0008301 GO:GO:0044212
GO:GO:0007049 GO:GO:0030183 GO:GO:0035264 GO:GO:0030097
GO:GO:0001570 GO:GO:0016525 GO:GO:0031016 GO:GO:0007492
GO:GO:0070365 GO:GO:0030177 eggNOG:NOG252905 GO:GO:0034504
GO:GO:0032993 GO:GO:0048568 GO:GO:0090009 GO:GO:0030948
GO:GO:0022027 GO:GO:0035050 GO:GO:0016973 GO:GO:0030878
EMBL:CH473953 GeneTree:ENSGT00680000099625 GO:GO:0048853
GO:GO:0061009 CTD:3087 HOGENOM:HOG000049110 HOVERGEN:HBG055460
KO:K08024 OrthoDB:EOG4XKV7W HSSP:P22808 OMA:DNSCDQR GO:GO:0071103
GO:GO:0061010 GO:GO:0061011 GO:GO:0061017 GO:GO:0002573
GO:GO:0060431 EMBL:BC088135 EMBL:D86383 IPI:IPI00211318
RefSeq:NP_077361.1 UniGene:Rn.12188 SMR:Q9WV22 STRING:Q9WV22
Ensembl:ENSRNOT00000022384 GeneID:79237 KEGG:rno:79237
UCSC:RGD:619932 InParanoid:Q9WV22 NextBio:614664
Genevestigator:Q9WV22 Uniprot:Q9WV22
Length = 271
Score = 118 (46.6 bits), Expect = 0.00043, P = 0.00043
Identities = 24/69 (34%), Positives = 42/69 (60%)
Query: 115 RHTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENS 174
R + +Q E+E F+ + +R++L+K L L+ RQVK WFQNRR + + +++ + S
Sbjct: 144 RFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRRLKQENPQS 203
Query: 175 LLKSEIEKL 183
K E++ L
Sbjct: 204 NKKDELDSL 212
>UNIPROTKB|H0YAD2 [details] [associations]
symbol:PHOX2B "Paired mesoderm homeobox protein 2B"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AC105389 HGNC:HGNC:9143
Ensembl:ENST00000510424 Uniprot:H0YAD2
Length = 180
Score = 111 (44.1 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 21/54 (38%), Positives = 37/54 (68%)
Query: 117 TAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQER 170
T+ Q++E+E +F E+ +PD R++L+ ++ L +V+ WFQNRR + + QER
Sbjct: 46 TSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAKFRK-QER 98
Score = 37 (18.1 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 320 SAENSSNGKSNRSIEASRD 338
+A + NG S + ++SRD
Sbjct: 103 AAAAAKNGSSGKKSDSSRD 121
>UNIPROTKB|Q91975 [details] [associations]
symbol:DBX2 "Homeobox protein DBX2" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000976 eggNOG:NOG270330 HOGENOM:HOG000112172
HOVERGEN:HBG104467 OrthoDB:EOG4MPHQG EMBL:X59548 EMBL:X59549
IPI:IPI00822533 PIR:A56566 UniGene:Gga.12249
ProteinModelPortal:Q91975 SMR:Q91975 ArrayExpress:Q91975
Uniprot:Q91975
Length = 157
Score = 108 (43.1 bits), Expect = 0.00045, P = 0.00045
Identities = 26/84 (30%), Positives = 48/84 (57%)
Query: 119 EQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENSLLKS 178
+Q + +E +F++ + + R++L+ LGL QVK WFQNRR + + +E+ L
Sbjct: 19 DQRKALEKMFQKQKYISKTDRKKLAINLGLKESQVKIWFQNRRMKWRNSKEKEV--LSNR 76
Query: 179 EIEKLREENKAMREAINKAC-CPN 201
+++ +EN + A+N A CP+
Sbjct: 77 CLQEGLQENYLSQSAMNFASPCPS 100
>UNIPROTKB|H0YIA6 [details] [associations]
symbol:HOXA11 "Homeobox protein Hox-A11" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005737 GO:GO:0005730
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 EMBL:AC004080 InterPro:IPR021918
Pfam:PF12045 HGNC:HGNC:5101 ChiTaRS:HOXA11 Ensembl:ENST00000517402
Uniprot:H0YIA6
Length = 283
Score = 118 (46.6 bits), Expect = 0.00047, P = 0.00047
Identities = 26/52 (50%), Positives = 35/52 (67%)
Query: 116 HTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTI 167
+T QIRE+E F S + ++++R QLS+ L L RQVK WFQNRR + K I
Sbjct: 218 YTKYQIRELEREFFFSVYINKEKRLQLSRMLNLTDRQVKIWFQNRRMKEKKI 269
>RGD|1564332 [details] [associations]
symbol:Rhox11 "reproductive homeobox 11" species:10116 "Rattus
norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046
PROSITE:PS50071 SMART:SM00389 RGD:1564332 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
OrthoDB:EOG4FFD33 GeneTree:ENSGT00530000063899 EMBL:DQ058658
IPI:IPI00358669 RefSeq:NP_001020044.1 UniGene:Rn.153915
Ensembl:ENSRNOT00000035449 GeneID:298346 KEGG:rno:298346
UCSC:RGD:1564332 CTD:194738 eggNOG:KOG0490 HOGENOM:HOG000136395
HOVERGEN:HBG067324 InParanoid:Q4TU72 NextBio:643503
Genevestigator:Q4TU72 Uniprot:Q4TU72
Length = 215
Score = 115 (45.5 bits), Expect = 0.00048, P = 0.00048
Identities = 23/81 (28%), Positives = 50/81 (61%)
Query: 114 HRHTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHEN 173
++ T Q+ EM+A+F+E+ +PD +R++L++ + + ++VK WF N+R +++ IQ
Sbjct: 101 YKFTPGQLWEMQAVFEETQYPDAFRRKELAELMNVDEQKVKDWFNNKRAKLRKIQRE--- 157
Query: 174 SLLKSEIEKLREENKAMREAI 194
+LK +I ++ M+ +
Sbjct: 158 -ILKGKIITPTQDELRMKTLV 177
>UNIPROTKB|E1BBM6 [details] [associations]
symbol:VAX2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0060041 "retina
development in camera-type eye" evidence=IEA] [GO:0048048
"embryonic eye morphogenesis" evidence=IEA] [GO:0031490 "chromatin
DNA binding" evidence=IEA] [GO:0030900 "forebrain development"
evidence=IEA] [GO:0009950 "dorsal/ventral axis specification"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0005737
GO:GO:0030900 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0060041
GO:GO:0007409 GO:GO:0048048 GO:GO:0000976 GO:GO:0031490
GO:GO:0009950 GeneTree:ENSGT00680000099870 KO:K09318 CTD:25806
OMA:LGEADHC EMBL:DAAA02030410 EMBL:DAAA02030411 IPI:IPI00689758
RefSeq:NP_001179242.1 UniGene:Bt.106472 Ensembl:ENSBTAT00000014023
GeneID:539808 KEGG:bta:539808 NextBio:20878236 Uniprot:E1BBM6
Length = 286
Score = 118 (46.6 bits), Expect = 0.00049, P = 0.00049
Identities = 27/75 (36%), Positives = 40/75 (53%)
Query: 117 TAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENSLL 176
TAEQ+ +E F+ + ++R +L++QL L+ QVK WFQNRRT+ K Q R
Sbjct: 107 TAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQKKDQSRDLEKRA 166
Query: 177 KSEIEKLREENKAMR 191
S K + +R
Sbjct: 167 SSSASKAFATSNILR 181
>MGI|MGI:1100513 [details] [associations]
symbol:Lmx1b "LIM homeobox transcription factor 1 beta"
species:10090 "Mus musculus" [GO:0001764 "neuron migration"
evidence=IMP] [GO:0002930 "trabecular meshwork development"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0008219 "cell death" evidence=IMP]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008283 "cell
proliferation" evidence=IMP] [GO:0010468 "regulation of gene
expression" evidence=IMP] [GO:0021587 "cerebellum morphogenesis"
evidence=IMP] [GO:0021954 "central nervous system neuron
development" evidence=IMP] [GO:0030182 "neuron differentiation"
evidence=IMP] [GO:0030199 "collagen fibril organization"
evidence=IMP] [GO:0030326 "embryonic limb morphogenesis"
evidence=NAS] [GO:0030901 "midbrain development" evidence=IMP]
[GO:0035108 "limb morphogenesis" evidence=IMP] [GO:0035265 "organ
growth" evidence=IMP] [GO:0043010 "camera-type eye development"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0071542 "dopaminergic neuron
differentiation" evidence=IMP] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 EMBL:AF078166
MGI:MGI:1100513 GO:GO:0005634 GO:GO:0001764 GO:GO:0046872
GO:GO:0008283 GO:GO:0008219 GO:GO:0071542 GO:GO:0043565
GO:GO:0008270 GO:GO:0030199 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GO:GO:0030326 GO:GO:0030901 GO:GO:0035265 EMBL:CH466542
GO:GO:0009953 GO:GO:0021954 GeneTree:ENSGT00700000104050
GO:GO:0021587 HOGENOM:HOG000231629 eggNOG:NOG243427
HOVERGEN:HBG052335 KO:K09371 OrthoDB:EOG4QFWDN CTD:4010
EMBL:AL929212 EMBL:BC119169 EMBL:BC125469 IPI:IPI00132794
RefSeq:NP_034855.2 UniGene:Mm.39825 ProteinModelPortal:O88609
SMR:O88609 STRING:O88609 PhosphoSite:O88609 PRIDE:O88609
Ensembl:ENSMUST00000041730 GeneID:16917 KEGG:mmu:16917
InParanoid:Q0VEN6 OMA:NRMEGMM NextBio:290964 Bgee:O88609
CleanEx:MM_LMX1B Genevestigator:O88609
GermOnline:ENSMUSG00000038765 GO:GO:0002930 Uniprot:O88609
Length = 372
Score = 120 (47.3 bits), Expect = 0.00049, P = 0.00049
Identities = 24/70 (34%), Positives = 41/70 (58%)
Query: 117 TAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENSLL 176
T +Q R +A F+ S P K R+ L+ + GL+ R V+ WFQN+R ++K + RH+
Sbjct: 204 TTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKKLARRHQQQQE 263
Query: 177 KSEIEKLREE 186
+ ++L +E
Sbjct: 264 QQNSQRLGQE 273
>UNIPROTKB|G3V877 [details] [associations]
symbol:Lmx1b "LIM homeobox transcription factor 1 beta"
species:10116 "Rattus norvegicus" [GO:0001764 "neuron migration"
evidence=IEA] [GO:0002930 "trabecular meshwork development"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008219 "cell death" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0009953 "dorsal/ventral pattern formation"
evidence=IEA] [GO:0021587 "cerebellum morphogenesis" evidence=IEA]
[GO:0021954 "central nervous system neuron development"
evidence=IEA] [GO:0030199 "collagen fibril organization"
evidence=IEA] [GO:0030901 "midbrain development" evidence=IEA]
[GO:0035108 "limb morphogenesis" evidence=IEA] [GO:0035265 "organ
growth" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0071542
"dopaminergic neuron differentiation" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
RGD:620843 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104050 EMBL:CH474001 OMA:NRMEGMM
UniGene:Rn.92364 Ensembl:ENSRNOT00000022953 Uniprot:G3V877
Length = 372
Score = 120 (47.3 bits), Expect = 0.00049, P = 0.00049
Identities = 24/70 (34%), Positives = 41/70 (58%)
Query: 117 TAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENSLL 176
T +Q R +A F+ S P K R+ L+ + GL+ R V+ WFQN+R ++K + RH+
Sbjct: 204 TTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKKLARRHQQQQE 263
Query: 177 KSEIEKLREE 186
+ ++L +E
Sbjct: 264 QQNSQRLGQE 273
>UNIPROTKB|F1NDZ5 [details] [associations]
symbol:LMX1B "LIM/homeobox protein LMX-1.2" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001764
"neuron migration" evidence=IEA] [GO:0002930 "trabecular meshwork
development" evidence=IEA] [GO:0008219 "cell death" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IEA] [GO:0009953
"dorsal/ventral pattern formation" evidence=IEA] [GO:0021587
"cerebellum morphogenesis" evidence=IEA] [GO:0021954 "central
nervous system neuron development" evidence=IEA] [GO:0030199
"collagen fibril organization" evidence=IEA] [GO:0030901 "midbrain
development" evidence=IEA] [GO:0035108 "limb morphogenesis"
evidence=IEA] [GO:0035265 "organ growth" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0071542 "dopaminergic neuron
differentiation" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0046872 GO:GO:0008283 GO:GO:0008219 GO:GO:0043565
GO:GO:0008270 GO:GO:0030199 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0035265
GeneTree:ENSGT00700000104050 IPI:IPI00599399 OMA:NRMEGMM
EMBL:AADN02026296 EMBL:AADN02026297 EMBL:AADN02026298
EMBL:AADN02031658 Ensembl:ENSGALT00000001376 Uniprot:F1NDZ5
Length = 377
Score = 120 (47.3 bits), Expect = 0.00050, P = 0.00050
Identities = 24/70 (34%), Positives = 41/70 (58%)
Query: 117 TAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENSLL 176
T +Q R +A F+ S P K R+ L+ + GL+ R V+ WFQN+R ++K + RH+
Sbjct: 203 TTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKKLARRHQQQQE 262
Query: 177 KSEIEKLREE 186
+ ++L +E
Sbjct: 263 QQNSQRLGQE 272
>UNIPROTKB|P53413 [details] [associations]
symbol:LMX1B "LIM/homeobox protein LMX-1.2" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 HOGENOM:HOG000231629
eggNOG:NOG243427 HOVERGEN:HBG052335 KO:K09371 OrthoDB:EOG4QFWDN
EMBL:L39880 EMBL:U41823 IPI:IPI00599399 RefSeq:NP_990689.1
UniGene:Gga.758 ProteinModelPortal:P53413 STRING:P53413
GeneID:396312 KEGG:gga:396312 CTD:4010 InParanoid:P53413
NextBio:20816360 Uniprot:P53413
Length = 377
Score = 120 (47.3 bits), Expect = 0.00050, P = 0.00050
Identities = 24/70 (34%), Positives = 41/70 (58%)
Query: 117 TAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENSLL 176
T +Q R +A F+ S P K R+ L+ + GL+ R V+ WFQN+R ++K + RH+
Sbjct: 203 TTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKKLARRHQQQQE 262
Query: 177 KSEIEKLREE 186
+ ++L +E
Sbjct: 263 QQNSQRLGQE 272
>UNIPROTKB|O60663 [details] [associations]
symbol:LMX1B "LIM homeobox transcription factor 1-beta"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0001701 "in utero embryonic development" evidence=NAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0030182 "neuron differentiation" evidence=ISS] [GO:0007275
"multicellular organismal development" evidence=NAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0009953 "dorsal/ventral pattern formation" evidence=ISS]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0030182 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 EMBL:CH471090 GO:GO:0001701
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0009953 HOGENOM:HOG000231629
eggNOG:NOG243427 HOVERGEN:HBG052335 KO:K09371 OrthoDB:EOG4QFWDN
CTD:4010 EMBL:AF057135 EMBL:AF059575 EMBL:AF059572 EMBL:AF059573
EMBL:AF059574 EMBL:AL161908 EMBL:AL161731 EMBL:BC069601
EMBL:BC112120 EMBL:BC113491 IPI:IPI00030989 IPI:IPI00220363
RefSeq:NP_001167618.1 RefSeq:NP_002307.2 UniGene:Hs.129133
ProteinModelPortal:O60663 SMR:O60663 IntAct:O60663 STRING:O60663
PhosphoSite:O60663 PaxDb:O60663 PRIDE:O60663 DNASU:4010
Ensembl:ENST00000373474 Ensembl:ENST00000425646 GeneID:4010
KEGG:hsa:4010 UCSC:uc004bqj.3 GeneCards:GC09P129376 HGNC:HGNC:6654
MIM:161200 MIM:602575 neXtProt:NX_O60663 Orphanet:2614
PharmGKB:PA30417 InParanoid:O60663 PhylomeDB:O60663 GenomeRNAi:4010
NextBio:15732 ArrayExpress:O60663 Bgee:O60663 CleanEx:HS_LMX1B
Genevestigator:O60663 GermOnline:ENSG00000136944 Uniprot:O60663
Length = 379
Score = 120 (47.3 bits), Expect = 0.00051, P = 0.00051
Identities = 24/70 (34%), Positives = 41/70 (58%)
Query: 117 TAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENSLL 176
T +Q R +A F+ S P K R+ L+ + GL+ R V+ WFQN+R ++K + RH+
Sbjct: 204 TTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKKLARRHQQQQE 263
Query: 177 KSEIEKLREE 186
+ ++L +E
Sbjct: 264 QQNSQRLGQE 273
>RGD|621133 [details] [associations]
symbol:Vax2 "ventral anterior homeobox 2" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IEA;ISO] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007409 "axonogenesis" evidence=IEA;ISO] [GO:0009950
"dorsal/ventral axis specification" evidence=IEA;ISO] [GO:0016055
"Wnt receptor signaling pathway" evidence=IEA] [GO:0030900
"forebrain development" evidence=IEA;ISO;ISS] [GO:0031490
"chromatin DNA binding" evidence=IEA;ISO] [GO:0043010 "camera-type
eye development" evidence=ISO] [GO:0048048 "embryonic eye
morphogenesis" evidence=IEA;ISO] [GO:0060041 "retina development in
camera-type eye" evidence=IEA;ISO] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:621133 GO:GO:0005634 GO:GO:0005737 GO:GO:0016055
GO:GO:0030900 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122
GO:GO:0060041 GO:GO:0007409 GO:GO:0048048 GO:GO:0000976
GO:GO:0031490 GO:GO:0009950 eggNOG:NOG309408 HOGENOM:HOG000049217
HOVERGEN:HBG007558 KO:K09318 OrthoDB:EOG4QVCD6 CTD:25806
EMBL:AF113516 IPI:IPI00204233 RefSeq:NP_072159.1 UniGene:Rn.48765
ProteinModelPortal:Q9JLZ9 GeneID:64572 KEGG:rno:64572
UCSC:RGD:621133 InParanoid:Q9JLZ9 NextBio:613528
Genevestigator:Q9JLZ9 GermOnline:ENSRNOG00000013261 Uniprot:Q9JLZ9
Length = 292
Score = 118 (46.6 bits), Expect = 0.00051, P = 0.00051
Identities = 28/72 (38%), Positives = 39/72 (54%)
Query: 117 TAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERH-ENSL 175
TAEQ+ +E F+ + ++R +L++QL L+ QVK WFQNRRT+ K Q R E
Sbjct: 110 TAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQKKDQSRDLEKRA 169
Query: 176 LKSEIEKLREEN 187
S E N
Sbjct: 170 SSSAFEAFATSN 181
>UNIPROTKB|Q9JLZ9 [details] [associations]
symbol:Vax2 "Ventral anterior homeobox 2" species:10116
"Rattus norvegicus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 RGD:621133 GO:GO:0005634
GO:GO:0005737 GO:GO:0016055 GO:GO:0030900 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0060041 GO:GO:0007409
GO:GO:0048048 GO:GO:0000976 GO:GO:0031490 GO:GO:0009950
eggNOG:NOG309408 HOGENOM:HOG000049217 HOVERGEN:HBG007558 KO:K09318
OrthoDB:EOG4QVCD6 CTD:25806 EMBL:AF113516 IPI:IPI00204233
RefSeq:NP_072159.1 UniGene:Rn.48765 ProteinModelPortal:Q9JLZ9
GeneID:64572 KEGG:rno:64572 UCSC:RGD:621133 InParanoid:Q9JLZ9
NextBio:613528 Genevestigator:Q9JLZ9 GermOnline:ENSRNOG00000013261
Uniprot:Q9JLZ9
Length = 292
Score = 118 (46.6 bits), Expect = 0.00051, P = 0.00051
Identities = 28/72 (38%), Positives = 39/72 (54%)
Query: 117 TAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERH-ENSL 175
TAEQ+ +E F+ + ++R +L++QL L+ QVK WFQNRRT+ K Q R E
Sbjct: 110 TAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQKKDQSRDLEKRA 169
Query: 176 LKSEIEKLREEN 187
S E N
Sbjct: 170 SSSAFEAFATSN 181
>UNIPROTKB|G1K364 [details] [associations]
symbol:LOC100858967 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0001656
"metanephros development" evidence=IEA] [GO:0001658 "branching
involved in ureteric bud morphogenesis" evidence=IEA] [GO:0001759
"organ induction" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0007501 "mesodermal cell
fate specification" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0009953 "dorsal/ventral
pattern formation" evidence=IEA] [GO:0009954 "proximal/distal
pattern formation" evidence=IEA] [GO:0010720 "positive regulation
of cell development" evidence=IEA] [GO:0032332 "positive regulation
of chondrocyte differentiation" evidence=IEA] [GO:0032993
"protein-DNA complex" evidence=IEA] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0048589
"developmental growth" evidence=IEA] [GO:0060272 "embryonic
skeletal joint morphogenesis" evidence=IEA] [GO:0060351 "cartilage
development involved in endochondral bone morphogenesis"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
UniGene:Gga.957 OMA:GGCRETA NextBio:20815412 InterPro:IPR021918
Pfam:PF12045 GeneTree:ENSGT00700000104263 EMBL:AADN02000990
EMBL:AADN02000991 EMBL:AADN02000992 EMBL:AADN02000993
Ensembl:ENSGALT00000037819 Uniprot:G1K364
Length = 296
Score = 118 (46.6 bits), Expect = 0.00052, P = 0.00052
Identities = 26/52 (50%), Positives = 35/52 (67%)
Query: 116 HTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTI 167
+T QIRE+E F S + ++++R QLS+ L L RQVK WFQNRR + K I
Sbjct: 231 YTKYQIRELEREFFFSVYINKEKRLQLSRMLNLTDRQVKIWFQNRRMKEKKI 282
>ZFIN|ZDB-GENE-000128-13 [details] [associations]
symbol:dbx2 "developing brain homeobox 2"
species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-000128-13 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HSSP:P23441 EMBL:AF030286 IPI:IPI00488950
UniGene:Dr.107144 UniGene:Dr.156003 UniGene:Dr.159072
ProteinModelPortal:Q9PTT9 SMR:Q9PTT9 HOVERGEN:HBG098470
InParanoid:Q9PTT9 NextBio:20806823 Uniprot:Q9PTT9
Length = 194
Score = 113 (44.8 bits), Expect = 0.00053, P = 0.00053
Identities = 25/67 (37%), Positives = 40/67 (59%)
Query: 119 EQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENSLLKS 178
EQ RE+E F + + + +R +L+ +L L QVK WFQNRR + + +E+ E S +
Sbjct: 104 EQRRELEKTFSKQKYISKTERNRLASELSLKETQVKIWFQNRRMKWRNSREK-EISNTHT 162
Query: 179 EIEKLRE 185
+EKL +
Sbjct: 163 HMEKLTD 169
>UNIPROTKB|P31258 [details] [associations]
symbol:HOXA11 "Homeobox protein Hox-A11" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0001656
"metanephros development" evidence=IEA] [GO:0001658 "branching
involved in ureteric bud morphogenesis" evidence=IEA] [GO:0001759
"organ induction" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0007501 "mesodermal cell
fate specification" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0009953 "dorsal/ventral
pattern formation" evidence=IEA] [GO:0009954 "proximal/distal
pattern formation" evidence=IEA] [GO:0010720 "positive regulation
of cell development" evidence=IEA] [GO:0032332 "positive regulation
of chondrocyte differentiation" evidence=IEA] [GO:0032993
"protein-DNA complex" evidence=IEA] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0048589
"developmental growth" evidence=IEA] [GO:0060272 "embryonic
skeletal joint morphogenesis" evidence=IEA] [GO:0060351 "cartilage
development involved in endochondral bone morphogenesis"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005737 GO:GO:0045893
GO:GO:0005730 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0005667 GO:GO:0032332 GO:GO:0048589 GO:GO:0032993
GO:GO:0001759 EMBL:M81250 IPI:IPI00585648 RefSeq:NP_989950.1
RefSeq:XP_003640756.1 RefSeq:XP_003640763.1 UniGene:Gga.957
ProteinModelPortal:P31258 SMR:P31258 STRING:P31258 GeneID:100858967
GeneID:100859078 GeneID:395327 KEGG:gga:100858967
KEGG:gga:100859078 KEGG:gga:395327 CTD:3207 eggNOG:NOG274734
HOGENOM:HOG000231898 HOVERGEN:HBG052048 InParanoid:P31258 KO:K09296
OMA:GGCRETA NextBio:20815412 ArrayExpress:P31258 GO:GO:0010720
InterPro:IPR021918 Pfam:PF12045 Uniprot:P31258
Length = 297
Score = 118 (46.6 bits), Expect = 0.00053, P = 0.00053
Identities = 26/52 (50%), Positives = 35/52 (67%)
Query: 116 HTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTI 167
+T QIRE+E F S + ++++R QLS+ L L RQVK WFQNRR + K I
Sbjct: 232 YTKYQIRELEREFFFSVYINKEKRLQLSRMLNLTDRQVKIWFQNRRMKEKKI 283
>UNIPROTKB|F1PUR9 [details] [associations]
symbol:DUXA "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 OMA:PGYATKQ
EMBL:AAEX03000701 Ensembl:ENSCAFT00000003829
GeneTree:ENSGT00610000085975 Uniprot:F1PUR9
Length = 163
Score = 109 (43.4 bits), Expect = 0.00053, P = 0.00053
Identities = 19/57 (33%), Positives = 36/57 (63%)
Query: 116 HTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHE 172
+T+ Q+ + F +P+P R+QL+K++G+ +V+ WFQNRR++ +Q + E
Sbjct: 107 YTSSQLHTLIEAFTNNPYPGIDTREQLAKEIGIPESRVQIWFQNRRSRFH-VQRKRE 162
>FB|FBgn0052105 [details] [associations]
symbol:CG32105 species:7227 "Drosophila melanogaster"
[GO:0005634 "nucleus" evidence=ISS] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 EMBL:AE014296 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GeneTree:ENSGT00700000104050
eggNOG:NOG243427 HSSP:P50480 EMBL:BT003467 RefSeq:NP_729801.1
UniGene:Dm.15353 SMR:Q9VTW5 IntAct:Q9VTW5 MINT:MINT-307196
EnsemblMetazoa:FBtr0075953 GeneID:39406 KEGG:dme:Dmel_CG32105
UCSC:CG32105-RB FlyBase:FBgn0052105 InParanoid:Q9VTW5 OMA:CCHAILP
OrthoDB:EOG4BCC40 GenomeRNAi:39406 NextBio:813485 Uniprot:Q9VTW5
Length = 640
Score = 123 (48.4 bits), Expect = 0.00053, P = 0.00053
Identities = 23/54 (42%), Positives = 37/54 (68%)
Query: 117 TAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQER 170
T++Q ++ +A F +SP P K R+ L+K GL+ R V+ WFQN+R ++K IQ +
Sbjct: 432 TSQQRKQFKASFDQSPKPCRKVREALAKDTGLSVRVVQVWFQNQRAKMKKIQRK 485
>UNIPROTKB|H9L1U3 [details] [associations]
symbol:H9L1U3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00610000086217 EMBL:AADN02076603
Ensembl:ENSGALT00000035653 OMA:FREQRYI Uniprot:H9L1U3
Length = 119
Score = 98 (39.6 bits), Expect = 0.00053, P = 0.00053
Identities = 18/51 (35%), Positives = 33/51 (64%)
Query: 115 RHTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIK 165
+ +A Q++E+E F+E + ++++L+ L L+ Q+K WFQNRR + K
Sbjct: 62 KFSAVQLQELERSFREQRYIGASEKRRLAAALDLSQSQIKTWFQNRRMKFK 112
>UNIPROTKB|J9P485 [details] [associations]
symbol:EMX2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00680000099625 EMBL:AAEX03015567 EMBL:AAEX03015568
EMBL:AAEX03015569 Ensembl:ENSCAFT00000043720 Uniprot:J9P485
Length = 134
Score = 98 (39.6 bits), Expect = 0.00053, P = 0.00053
Identities = 21/55 (38%), Positives = 32/55 (58%)
Query: 120 QIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENS 174
Q+ +E F+++ + +R+QL+ L L QVK WFQNRRT+ K + E S
Sbjct: 47 QLLRLEHAFEKNHYVVGAERKQLAHSLSLTETQVKVWFQNRRTKFKRQKLEEEGS 101
>WB|WBGene00000428 [details] [associations]
symbol:ceh-1 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00660000095141 EMBL:FO080880 EMBL:X52810 PIR:S13128
PIR:T16081 PIR:T37298 RefSeq:NP_508796.1 ProteinModelPortal:P53547
SMR:P53547 EnsemblMetazoa:F16H11.4.1 EnsemblMetazoa:F16H11.4.2
GeneID:191614 KEGG:cel:CELE_F16H11.4 UCSC:F16H11.4 CTD:191614
WormBase:F16H11.4 eggNOG:NOG286158 HOGENOM:HOG000020299
InParanoid:P53547 OMA:DANTPQT NextBio:949682 Uniprot:P53547
Length = 132
Score = 98 (39.6 bits), Expect = 0.00053, P = 0.00053
Identities = 23/49 (46%), Positives = 30/49 (61%)
Query: 117 TAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIK 165
T EQ+ +E FK S + +R L+ QL L+ QVK WFQNRRT+ K
Sbjct: 9 TYEQLVALENKFKTSRYLSVVERLNLAIQLQLSETQVKIWFQNRRTKWK 57
>UNIPROTKB|F8VYP0 [details] [associations]
symbol:LMX1B "LIM homeobox transcription factor 1-beta"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 KO:K09371 CTD:4010 EMBL:AL161908 EMBL:AL161731
IPI:IPI00220363 RefSeq:NP_002307.2 UniGene:Hs.129133 DNASU:4010
GeneID:4010 KEGG:hsa:4010 HGNC:HGNC:6654 GenomeRNAi:4010
NextBio:15732 ProteinModelPortal:F8VYP0 SMR:F8VYP0 PRIDE:F8VYP0
Ensembl:ENST00000526117 UCSC:uc004bqi.3 ArrayExpress:F8VYP0
Bgee:F8VYP0 Uniprot:F8VYP0
Length = 395
Score = 120 (47.3 bits), Expect = 0.00055, P = 0.00055
Identities = 24/70 (34%), Positives = 41/70 (58%)
Query: 117 TAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENSLL 176
T +Q R +A F+ S P K R+ L+ + GL+ R V+ WFQN+R ++K + RH+
Sbjct: 227 TTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKKLARRHQQQQE 286
Query: 177 KSEIEKLREE 186
+ ++L +E
Sbjct: 287 QQNSQRLGQE 296
>UNIPROTKB|P53545 [details] [associations]
symbol:GSC "Homeobox protein goosecoid" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
HOGENOM:HOG000112823 EMBL:X70471 IPI:IPI00594603 PIR:A47539
RefSeq:NP_990662.1 UniGene:Gga.738 ProteinModelPortal:P53545
SMR:P53545 STRING:P53545 GeneID:396273 KEGG:gga:396273 CTD:145258
eggNOG:NOG247162 HOVERGEN:HBG005921 InParanoid:P53545 KO:K09324
OrthoDB:EOG46Q6T9 NextBio:20816324 Uniprot:P53545
Length = 245
Score = 116 (45.9 bits), Expect = 0.00055, P = 0.00055
Identities = 29/85 (34%), Positives = 50/85 (58%)
Query: 114 HR--HTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERH 171
HR T EQ+ +E LF+E+ +PD R+QL++++ L +V+ WF+NRR + + Q+R
Sbjct: 153 HRTIFTDEQLEALENLFQETKYPDVGTREQLARKVHLREEKVEVWFKNRRAKWRR-QKRS 211
Query: 172 ENSLLKSEIEKLREENKAMREAINK 196
+ E E ++ NKA + + K
Sbjct: 212 SSE----ESENAQKWNKASKTSPEK 232
>UNIPROTKB|F1NPM5 [details] [associations]
symbol:GSC "Homeobox protein goosecoid" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0021904 "dorsal/ventral neural tube patterning"
evidence=IEA] [GO:0023019 "signal transduction involved in
regulation of gene expression" evidence=IEA] [GO:0030178 "negative
regulation of Wnt receptor signaling pathway" evidence=IEA]
[GO:0030900 "forebrain development" evidence=IEA] [GO:0042474
"middle ear morphogenesis" evidence=IEA] [GO:0048644 "muscle organ
morphogenesis" evidence=IEA] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0000122 GO:GO:0030178
GO:GO:0023019 IPI:IPI00594603 OMA:PVGPSCC
GeneTree:ENSGT00700000104273 EMBL:AADN02003672
Ensembl:ENSGALT00000017878 Uniprot:F1NPM5
Length = 246
Score = 116 (45.9 bits), Expect = 0.00056, P = 0.00056
Identities = 29/85 (34%), Positives = 50/85 (58%)
Query: 114 HR--HTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERH 171
HR T EQ+ +E LF+E+ +PD R+QL++++ L +V+ WF+NRR + + Q+R
Sbjct: 154 HRTIFTDEQLEALENLFQETKYPDVGTREQLARRVHLREEKVEVWFKNRRAKWRR-QKRS 212
Query: 172 ENSLLKSEIEKLREENKAMREAINK 196
+ E E ++ NKA + + K
Sbjct: 213 SSE----ESENAQKWNKASKTSPEK 233
>UNIPROTKB|F1NXJ0 [details] [associations]
symbol:DBX2 "Homeobox protein DBX2" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GeneTree:ENSGT00700000104097 IPI:IPI00822533
EMBL:AADN02010005 EMBL:AADN02010006 Ensembl:ENSGALT00000038779
ArrayExpress:F1NXJ0 Uniprot:F1NXJ0
Length = 160
Score = 108 (43.1 bits), Expect = 0.00059, P = 0.00059
Identities = 26/84 (30%), Positives = 48/84 (57%)
Query: 119 EQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENSLLKS 178
+Q + +E +F++ + + R++L+ LGL QVK WFQNRR + + +E+ L
Sbjct: 22 DQRKALEKMFQKQKYISKTDRKKLAINLGLKESQVKIWFQNRRMKWRNSKEKEV--LSNR 79
Query: 179 EIEKLREENKAMREAINKAC-CPN 201
+++ +EN + A+N A CP+
Sbjct: 80 CLQEGLQENYLSQSAMNFASPCPS 103
>UNIPROTKB|P31270 [details] [associations]
symbol:HOXA11 "Homeobox protein Hox-A11" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0001656 "metanephros development" evidence=IEA]
[GO:0001759 "organ induction" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0009954 "proximal/distal pattern formation" evidence=IEA]
[GO:0042733 "embryonic digit morphogenesis" evidence=IEA]
[GO:0060272 "embryonic skeletal joint morphogenesis" evidence=IEA]
[GO:0007501 "mesodermal cell fate specification" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0032993 "protein-DNA complex" evidence=ISS]
[GO:0043234 "protein complex" evidence=ISS] [GO:0001501 "skeletal
system development" evidence=ISS] [GO:0001658 "branching involved
in ureteric bud morphogenesis" evidence=ISS] [GO:0007275
"multicellular organismal development" evidence=ISS] [GO:0009953
"dorsal/ventral pattern formation" evidence=ISS] [GO:0010720
"positive regulation of cell development" evidence=ISS] [GO:0030326
"embryonic limb morphogenesis" evidence=ISS] [GO:0032332 "positive
regulation of chondrocyte differentiation" evidence=ISS]
[GO:0048589 "developmental growth" evidence=ISS] [GO:0060351
"cartilage development involved in endochondral bone morphogenesis"
evidence=ISS] [GO:0005667 "transcription factor complex"
evidence=ISS] [GO:0009653 "anatomical structure morphogenesis"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005737 GO:GO:0045893 GO:GO:0005730
GO:GO:0009952 EMBL:CH471073 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 EMBL:CH236948 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0007501
GO:GO:0030326 GO:GO:0032332 GO:GO:0048589 GO:GO:0009953
GO:GO:0009954 GO:GO:0042733 GO:GO:0001658 GO:GO:0001656
GO:GO:0032993 GO:GO:0001759 GO:GO:0060351 EMBL:AC004080 CTD:3207
eggNOG:NOG274734 HOGENOM:HOG000231898 HOVERGEN:HBG052048 KO:K09296
OMA:GGCRETA GO:GO:0010720 InterPro:IPR021918 Pfam:PF12045
EMBL:AF071164 EMBL:AF039307 EMBL:BC040948 IPI:IPI00010754
PIR:S14931 RefSeq:NP_005514.1 UniGene:Hs.249171
ProteinModelPortal:P31270 SMR:P31270 IntAct:P31270 STRING:P31270
PhosphoSite:P31270 DMDM:13124744 PRIDE:P31270 DNASU:3207
Ensembl:ENST00000006015 GeneID:3207 KEGG:hsa:3207 UCSC:uc003syx.3
GeneCards:GC07M027220 HGNC:HGNC:5101 HPA:HPA035623 MIM:142958
MIM:605432 neXtProt:NX_P31270 Orphanet:71289 PharmGKB:PA29378
InParanoid:P31270 OrthoDB:EOG4KKZ3X PhylomeDB:P31270 ChiTaRS:HOXA11
GenomeRNAi:3207 NextBio:12762 Bgee:P31270 CleanEx:HS_HOXA11
Genevestigator:P31270 GermOnline:ENSG00000005073 Uniprot:P31270
Length = 313
Score = 118 (46.6 bits), Expect = 0.00059, P = 0.00059
Identities = 26/52 (50%), Positives = 35/52 (67%)
Query: 116 HTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTI 167
+T QIRE+E F S + ++++R QLS+ L L RQVK WFQNRR + K I
Sbjct: 248 YTKYQIRELEREFFFSVYINKEKRLQLSRMLNLTDRQVKIWFQNRRMKEKKI 299
>MGI|MGI:96172 [details] [associations]
symbol:Hoxa11 "homeobox A11" species:10090 "Mus musculus"
[GO:0001501 "skeletal system development" evidence=IGI;IMP]
[GO:0001656 "metanephros development" evidence=IGI] [GO:0001658
"branching involved in ureteric bud morphogenesis" evidence=IGI]
[GO:0001759 "organ induction" evidence=IGI] [GO:0003677 "DNA
binding" evidence=TAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IDA] [GO:0007501 "mesodermal cell fate specification"
evidence=IDA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IGI] [GO:0009953 "dorsal/ventral pattern
formation" evidence=IGI] [GO:0009954 "proximal/distal pattern
formation" evidence=IGI] [GO:0010720 "positive regulation of cell
development" evidence=IGI] [GO:0030326 "embryonic limb
morphogenesis" evidence=IGI] [GO:0032330 "regulation of chondrocyte
differentiation" evidence=IGI] [GO:0032332 "positive regulation of
chondrocyte differentiation" evidence=IGI] [GO:0032993 "protein-DNA
complex" evidence=IDA] [GO:0035115 "embryonic forelimb
morphogenesis" evidence=IGI] [GO:0042733 "embryonic digit
morphogenesis" evidence=IGI] [GO:0043234 "protein complex"
evidence=IDA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0048589 "developmental growth"
evidence=IGI] [GO:0060272 "embryonic skeletal joint morphogenesis"
evidence=IGI] [GO:0060351 "cartilage development involved in
endochondral bone morphogenesis" evidence=IGI] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 MGI:MGI:96172 GO:GO:0005737
GO:GO:0045893 GO:GO:0005730 GO:GO:0009952 GO:GO:0003677
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0007501 GO:GO:0032332 GO:GO:0048589 GO:GO:0009953
GO:GO:0009954 GO:GO:0042733 GO:GO:0001658 GO:GO:0001656
GO:GO:0060272 GO:GO:0032993 GO:GO:0001759 GO:GO:0060351 CTD:3207
eggNOG:NOG274734 HOGENOM:HOG000231898 HOVERGEN:HBG052048 KO:K09296
OMA:GGCRETA GO:GO:0010720 InterPro:IPR021918 Pfam:PF12045
OrthoDB:EOG4KKZ3X EMBL:U20371 EMBL:U20370 EMBL:AK133481
EMBL:BC119302 IPI:IPI00133248 PIR:G37290 RefSeq:NP_034580.1
UniGene:Mm.26954 ProteinModelPortal:P31311 SMR:P31311 IntAct:P31311
MINT:MINT-1172550 STRING:P31311 PhosphoSite:P31311 PRIDE:P31311
Ensembl:ENSMUST00000048026 GeneID:15396 KEGG:mmu:15396
UCSC:uc009byn.1 GeneTree:ENSGT00700000104263 InParanoid:P31311
NextBio:288080 Bgee:P31311 CleanEx:MM_HOXA11 Genevestigator:P31311
GermOnline:ENSMUSG00000038210 Uniprot:P31311
Length = 313
Score = 118 (46.6 bits), Expect = 0.00059, P = 0.00059
Identities = 26/52 (50%), Positives = 35/52 (67%)
Query: 116 HTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTI 167
+T QIRE+E F S + ++++R QLS+ L L RQVK WFQNRR + K I
Sbjct: 248 YTKYQIRELEREFFFSVYINKEKRLQLSRMLNLTDRQVKIWFQNRRMKEKKI 299
>RGD|1564605 [details] [associations]
symbol:Hoxa11 "homeobox A11" species:10116 "Rattus norvegicus"
[GO:0001501 "skeletal system development" evidence=ISO] [GO:0001656
"metanephros development" evidence=ISO] [GO:0001658 "branching
involved in ureteric bud morphogenesis" evidence=ISO] [GO:0001759
"organ induction" evidence=ISO] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0007275 "multicellular organismal
development" evidence=ISO] [GO:0007501 "mesodermal cell fate
specification" evidence=ISO] [GO:0009952 "anterior/posterior
pattern specification" evidence=ISO] [GO:0009953 "dorsal/ventral
pattern formation" evidence=ISO] [GO:0009954 "proximal/distal
pattern formation" evidence=ISO] [GO:0010720 "positive regulation
of cell development" evidence=ISO] [GO:0030326 "embryonic limb
morphogenesis" evidence=ISO] [GO:0032330 "regulation of chondrocyte
differentiation" evidence=ISO] [GO:0032332 "positive regulation of
chondrocyte differentiation" evidence=ISO] [GO:0032993 "protein-DNA
complex" evidence=ISO] [GO:0035115 "embryonic forelimb
morphogenesis" evidence=ISO] [GO:0042733 "embryonic digit
morphogenesis" evidence=ISO] [GO:0043234 "protein complex"
evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0048589 "developmental growth"
evidence=ISO] [GO:0060272 "embryonic skeletal joint morphogenesis"
evidence=ISO] [GO:0060351 "cartilage development involved in
endochondral bone morphogenesis" evidence=ISO] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 RGD:1564605 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 KO:K09295 CTD:3207 KO:K09296
OMA:GGCRETA InterPro:IPR021918 Pfam:PF12045
GeneTree:ENSGT00700000104263 EMBL:CH474011 EMBL:AC122669
RefSeq:NP_001123350.1 RefSeq:XP_003749800.1 RefSeq:XP_003752232.1
RefSeq:XP_003753947.1 UniGene:Rn.224575 Ensembl:ENSRNOT00000010256
GeneID:100909443 GeneID:100911743 GeneID:368057 KEGG:rno:100909443
KEGG:rno:100911743 KEGG:rno:368057 NextBio:691993 Uniprot:G3V6Z0
Length = 313
Score = 118 (46.6 bits), Expect = 0.00059, P = 0.00059
Identities = 26/52 (50%), Positives = 35/52 (67%)
Query: 116 HTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTI 167
+T QIRE+E F S + ++++R QLS+ L L RQVK WFQNRR + K I
Sbjct: 248 YTKYQIRELEREFFFSVYINKEKRLQLSRMLNLTDRQVKIWFQNRRMKEKKI 299
>UNIPROTKB|E1BNP2 [details] [associations]
symbol:HOXA11 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005667 "transcription factor complex" evidence=ISS]
[GO:0060351 "cartilage development involved in endochondral bone
morphogenesis" evidence=ISS] [GO:0048589 "developmental growth"
evidence=ISS] [GO:0032332 "positive regulation of chondrocyte
differentiation" evidence=ISS] [GO:0030326 "embryonic limb
morphogenesis" evidence=ISS] [GO:0010720 "positive regulation of
cell development" evidence=ISS] [GO:0009953 "dorsal/ventral pattern
formation" evidence=ISS] [GO:0007275 "multicellular organismal
development" evidence=ISS] [GO:0001658 "branching involved in
ureteric bud morphogenesis" evidence=ISS] [GO:0001501 "skeletal
system development" evidence=ISS] [GO:0043234 "protein complex"
evidence=ISS] [GO:0032993 "protein-DNA complex" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0007501 "mesodermal cell fate specification"
evidence=ISS] [GO:0060272 "embryonic skeletal joint morphogenesis"
evidence=IEA] [GO:0042733 "embryonic digit morphogenesis"
evidence=IEA] [GO:0009954 "proximal/distal pattern formation"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0001759 "organ induction"
evidence=IEA] [GO:0001656 "metanephros development" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005737 GO:GO:0045893 GO:GO:0005730
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0007501 GO:GO:0030326 GO:GO:0032332 GO:GO:0048589
GO:GO:0009953 GO:GO:0009954 GO:GO:0042733 GO:GO:0001658
GO:GO:0001656 GO:GO:0032993 GO:GO:0001759 GO:GO:0060351 OMA:GGCRETA
GO:GO:0010720 InterPro:IPR021918 Pfam:PF12045
GeneTree:ENSGT00700000104263 EMBL:DAAA02010937 IPI:IPI00715888
Ensembl:ENSBTAT00000019611 Uniprot:E1BNP2
Length = 315
Score = 118 (46.6 bits), Expect = 0.00060, P = 0.00060
Identities = 26/52 (50%), Positives = 35/52 (67%)
Query: 116 HTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTI 167
+T QIRE+E F S + ++++R QLS+ L L RQVK WFQNRR + K I
Sbjct: 250 YTKYQIRELEREFFFSVYINKEKRLQLSRMLNLTDRQVKIWFQNRRMKEKKI 301
>UNIPROTKB|F1S4R4 [details] [associations]
symbol:LOC100739572 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0060021
"palate development" evidence=IEA] [GO:0043010 "camera-type eye
development" evidence=IEA] [GO:0031490 "chromatin DNA binding"
evidence=IEA] [GO:0007420 "brain development" evidence=IEA]
[GO:0007411 "axon guidance" evidence=IEA] [GO:0007406 "negative
regulation of neuroblast proliferation" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GeneTree:ENSGT00680000099870 EMBL:CU462856
Ensembl:ENSSSCT00000011671 Uniprot:F1S4R4
Length = 253
Score = 116 (45.9 bits), Expect = 0.00060, P = 0.00060
Identities = 25/66 (37%), Positives = 44/66 (66%)
Query: 117 TAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENSLL 176
TAEQ+ +E F+ + ++R +L++QL L+ QVK WFQNRRT+ K +++ ++S L
Sbjct: 28 TAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQK--KDQGKDSEL 85
Query: 177 KSEIEK 182
+S + +
Sbjct: 86 RSVVSE 91
>UNIPROTKB|F1SHT7 [details] [associations]
symbol:HOXA11 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060351 "cartilage development involved in endochondral
bone morphogenesis" evidence=IEA] [GO:0060272 "embryonic skeletal
joint morphogenesis" evidence=IEA] [GO:0048589 "developmental
growth" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0042733 "embryonic
digit morphogenesis" evidence=IEA] [GO:0032993 "protein-DNA
complex" evidence=IEA] [GO:0032332 "positive regulation of
chondrocyte differentiation" evidence=IEA] [GO:0010720 "positive
regulation of cell development" evidence=IEA] [GO:0009954
"proximal/distal pattern formation" evidence=IEA] [GO:0009953
"dorsal/ventral pattern formation" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0007501 "mesodermal cell fate specification" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0001759 "organ induction" evidence=IEA]
[GO:0001658 "branching involved in ureteric bud morphogenesis"
evidence=IEA] [GO:0001656 "metanephros development" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005737 GO:GO:0045893 GO:GO:0005730
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0007501 GO:GO:0032332 GO:GO:0048589 GO:GO:0009953
GO:GO:0009954 GO:GO:0042733 GO:GO:0001658 GO:GO:0001656
GO:GO:0032993 GO:GO:0001759 GO:GO:0060351 OMA:GGCRETA GO:GO:0010720
InterPro:IPR021918 Pfam:PF12045 GeneTree:ENSGT00700000104263
EMBL:CU570959 EMBL:CU480612 Ensembl:ENSSSCT00000018179
Uniprot:F1SHT7
Length = 316
Score = 118 (46.6 bits), Expect = 0.00060, P = 0.00060
Identities = 26/52 (50%), Positives = 35/52 (67%)
Query: 116 HTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTI 167
+T QIRE+E F S + ++++R QLS+ L L RQVK WFQNRR + K I
Sbjct: 251 YTKYQIRELEREFFFSVYINKEKRLQLSRMLNLTDRQVKIWFQNRRMKEKKI 302
>WB|WBGene00000450 [details] [associations]
symbol:ceh-28 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0034243 "regulation of transcription elongation from RNA
polymerase II promoter" evidence=ISS] [GO:0000981
"sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=ISS] [GO:0050807 "regulation of synapse
organization" evidence=IMP] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000981
GO:GO:0000976 GO:GO:0050807 GO:GO:0034243
GeneTree:ENSGT00700000104129 KO:K09352 EMBL:Z77133 EMBL:AY205144
RefSeq:NP_510169.4 UniGene:Cel.11118 ProteinModelPortal:G5EE18
SMR:G5EE18 EnsemblMetazoa:K03A11.3 GeneID:191619
KEGG:cel:CELE_K03A11.3 CTD:191619 WormBase:K03A11.3 OMA:NPMFASA
NextBio:949702 Uniprot:G5EE18
Length = 201
Score = 113 (44.8 bits), Expect = 0.00062, P = 0.00062
Identities = 23/55 (41%), Positives = 35/55 (63%)
Query: 117 TAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTI-QER 170
T Q+ E+E FK+ + +R++L++ LGL QVK WFQNRR + K + Q+R
Sbjct: 112 TQHQVNELEERFKKQRYVTATEREELAQCLGLTATQVKIWFQNRRYKCKRLAQDR 166
>UNIPROTKB|G5EE18 [details] [associations]
symbol:ceh-28 "NK-2 family homeodomain protein CEH-28"
species:6239 "Caenorhabditis elegans" [GO:0006366 "transcription
from RNA polymerase II promoter" evidence=ISS] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000981 GO:GO:0000976
GO:GO:0050807 GO:GO:0034243 GeneTree:ENSGT00700000104129 KO:K09352
EMBL:Z77133 EMBL:AY205144 RefSeq:NP_510169.4 UniGene:Cel.11118
ProteinModelPortal:G5EE18 SMR:G5EE18 EnsemblMetazoa:K03A11.3
GeneID:191619 KEGG:cel:CELE_K03A11.3 CTD:191619 WormBase:K03A11.3
OMA:NPMFASA NextBio:949702 Uniprot:G5EE18
Length = 201
Score = 113 (44.8 bits), Expect = 0.00062, P = 0.00062
Identities = 23/55 (41%), Positives = 35/55 (63%)
Query: 117 TAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTI-QER 170
T Q+ E+E FK+ + +R++L++ LGL QVK WFQNRR + K + Q+R
Sbjct: 112 TQHQVNELEERFKKQRYVTATEREELAQCLGLTATQVKIWFQNRRYKCKRLAQDR 166
>UNIPROTKB|E2R114 [details] [associations]
symbol:HOXA11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
CTD:3207 KO:K09296 OMA:GGCRETA InterPro:IPR021918 Pfam:PF12045
GeneTree:ENSGT00700000104263 EMBL:AAEX03009390
RefSeq:XP_003431971.2 Ensembl:ENSCAFT00000004754 GeneID:100683897
KEGG:cfa:100683897 Uniprot:E2R114
Length = 327
Score = 118 (46.6 bits), Expect = 0.00064, P = 0.00064
Identities = 26/52 (50%), Positives = 35/52 (67%)
Query: 116 HTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTI 167
+T QIRE+E F S + ++++R QLS+ L L RQVK WFQNRR + K I
Sbjct: 262 YTKYQIRELEREFFFSVYINKEKRLQLSRMLNLTDRQVKIWFQNRRMKEKKI 313
>ZFIN|ZDB-GENE-980526-40 [details] [associations]
symbol:eng2b "engrailed 2b" species:7955 "Danio
rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IGI] [GO:0030901 "midbrain development"
evidence=IGI] [GO:0001708 "cell fate specification" evidence=IGI]
InterPro:IPR000047 InterPro:IPR000747 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00026
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-980526-40 GO:GO:0005634 GO:GO:0001708 GO:GO:0009952
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0030901 GO:GO:0000976 PROSITE:PS00033
HOVERGEN:HBG005975 InterPro:IPR019549 InterPro:IPR019737
Pfam:PF10525 HSSP:P14653 EMBL:BC071290 IPI:IPI00512460
UniGene:Dr.498 ProteinModelPortal:Q6IQW3 SMR:Q6IQW3 STRING:Q6IQW3
InParanoid:Q6IQW3 ArrayExpress:Q6IQW3 Uniprot:Q6IQW3
Length = 261
Score = 116 (45.9 bits), Expect = 0.00065, P = 0.00065
Identities = 21/49 (42%), Positives = 36/49 (73%)
Query: 117 TAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIK 165
TAEQ++ ++ F+ + + E++RQ L+++LGL Q+K WFQN+R +IK
Sbjct: 180 TAEQLQRLKNEFQNNRYLTEQRRQALAQELGLNESQIKIWFQNKRAKIK 228
>ZFIN|ZDB-GENE-980528-2060 [details] [associations]
symbol:gsc "goosecoid" species:7955 "Danio rerio"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0009950
"dorsal/ventral axis specification" evidence=IEP] [GO:0007420
"brain development" evidence=IGI] [GO:0021999 "neural plate
anterior/posterior regionalization" evidence=IGI] [GO:0009953
"dorsal/ventral pattern formation" evidence=IGI;IDA] [GO:0009948
"anterior/posterior axis specification" evidence=IDA] [GO:0007275
"multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-980528-2060 GO:GO:0005634 GO:GO:0007420 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009948
GO:GO:0009950 GO:GO:0021999 HOVERGEN:HBG005921 OMA:PVGPSCC
GeneTree:ENSGT00700000104273 EMBL:AL772209 IPI:IPI00487794
UniGene:Dr.289 SMR:Q7ZZR4 Ensembl:ENSDART00000082085
InParanoid:Q7ZZR4 Uniprot:Q7ZZR4
Length = 240
Score = 115 (45.5 bits), Expect = 0.00068, P = 0.00068
Identities = 32/87 (36%), Positives = 50/87 (57%)
Query: 114 HR--HTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRT----QIKTI 167
HR T EQ+ +E LF+E+ +PD R+QL++++ L +V+ WF+NRR Q ++
Sbjct: 149 HRTIFTDEQLEALENLFQETKYPDVGTREQLARKVHLREEKVEVWFKNRRAKWRRQKRSS 208
Query: 168 QERHENSL-----LKSEIEKLREENKA 189
E ENS K+ EK+ EE K+
Sbjct: 209 SEESENSQKWNKSTKTTSEKI-EEGKS 234
>UNIPROTKB|F6R243 [details] [associations]
symbol:CDX1 "Homeobox protein CDX-1" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0060349 "bone
morphogenesis" evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000976 EMBL:AADN02028624 IPI:IPI00819151
ProteinModelPortal:F6R243 Ensembl:ENSGALT00000040457 Uniprot:F6R243
Length = 117
Score = 97 (39.2 bits), Expect = 0.00068, P = 0.00068
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 116 HTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQER 170
+T Q E+E F S + +++ +L+ LGL RQVK WFQNRR + + + ++
Sbjct: 13 YTDHQRLELEKEFHYSRYITIRRKAELAAALGLTERQVKIWFQNRRAKERKVNKK 67
>UNIPROTKB|P14839 [details] [associations]
symbol:HOXB6 "Homeobox protein Hox-B6" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 EMBL:X16847 IPI:IPI00589688
PIR:S08303 ProteinModelPortal:P14839 SMR:P14839 Uniprot:P14839
Length = 84
Score = 97 (39.2 bits), Expect = 0.00068, P = 0.00068
Identities = 26/73 (35%), Positives = 37/73 (50%)
Query: 116 HTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENSL 175
+T Q E+E F + + ++R +++ L L RQ+K WFQNRR + K EN L
Sbjct: 14 YTRYQTLELEKEFHFNRYLTRRRRIEIAHSLCLTERQIKIWFQNRRMKWKK-----ENKL 68
Query: 176 LKSEIEKLREENK 188
L S EE K
Sbjct: 69 LSSSQLSAEEEEK 81
>UNIPROTKB|E1BXV0 [details] [associations]
symbol:VAX1 "Ventral anterior homeobox 1" species:9031
"Gallus gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0001764 "neuron
migration" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0007406 "negative
regulation of neuroblast proliferation" evidence=IEA] [GO:0007411
"axon guidance" evidence=IEA] [GO:0007420 "brain development"
evidence=IEA] [GO:0031490 "chromatin DNA binding" evidence=IEA]
[GO:0043010 "camera-type eye development" evidence=IEA] [GO:0060021
"palate development" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0030154 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000122 GO:GO:0000976 GO:GO:0031490
GeneTree:ENSGT00680000099870 EMBL:AADN02030950 EMBL:AADN02030951
EMBL:AADN02030952 IPI:IPI00821767 Ensembl:ENSGALT00000038881
OMA:FEKANIM Uniprot:E1BXV0
Length = 269
Score = 116 (45.9 bits), Expect = 0.00070, P = 0.00070
Identities = 25/66 (37%), Positives = 44/66 (66%)
Query: 117 TAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENSLL 176
TAEQ+ +E F+ + ++R +L++QL L+ QVK WFQNRRT+ K +++ ++S L
Sbjct: 100 TAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQK--KDQGKDSEL 157
Query: 177 KSEIEK 182
+S + +
Sbjct: 158 RSVVSE 163
>UNIPROTKB|Q9PU20 [details] [associations]
symbol:vax2-a "Ventral anterior homeobox 2a" species:8355
"Xenopus laevis" [GO:0030900 "forebrain development" evidence=ISS]
[GO:0060322 "head development" evidence=IMP] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0016055 GO:GO:0030900
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976 GO:GO:0060322
HOVERGEN:HBG007558 KO:K09318 EMBL:AJ238649 RefSeq:NP_001081712.1
UniGene:Xl.224 ProteinModelPortal:Q9PU20 GeneID:398011
KEGG:xla:398011 CTD:398011 Xenbase:XB-GENE-492927 Uniprot:Q9PU20
Length = 302
Score = 117 (46.2 bits), Expect = 0.00071, P = 0.00071
Identities = 26/65 (40%), Positives = 37/65 (56%)
Query: 117 TAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENSLL 176
TAEQ+ +E F+ + ++R +L++QL L+ QVK WFQNRRT+ K Q R
Sbjct: 113 TAEQLYRLELEFQRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQKKDQSRDSEKRS 172
Query: 177 KSEIE 181
S E
Sbjct: 173 SSTSE 177
>ZFIN|ZDB-GENE-030904-8 [details] [associations]
symbol:vax2 "ventral anterior homeobox 2"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0030900 "forebrain
development" evidence=ISS] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0061386 "closure of optic fissure"
evidence=IMP] [GO:0090259 "regulation of retinal ganglion cell axon
guidance" evidence=IMP] [GO:0060041 "retina development in
camera-type eye" evidence=IMP] [GO:0021554 "optic nerve
development" evidence=IMP] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-030904-8 GO:GO:0005634 GO:GO:0016055 GO:GO:0030900
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0060041 GO:GO:0000976 GO:GO:0061386 eggNOG:NOG309408
GeneTree:ENSGT00680000099870 GO:GO:0021554 HOGENOM:HOG000049217
HOVERGEN:HBG007558 KO:K09318 OrthoDB:EOG4QVCD6 GO:GO:0090259
EMBL:AY183363 IPI:IPI00501587 RefSeq:NP_919390.1 UniGene:Dr.88632
ProteinModelPortal:Q801E1 STRING:Q801E1 Ensembl:ENSDART00000081620
GeneID:373869 KEGG:dre:373869 CTD:25806 InParanoid:Q801E1
OMA:LSAVHRT NextBio:20813406 ArrayExpress:Q801E1 Bgee:Q801E1
Uniprot:Q801E1
Length = 307
Score = 117 (46.2 bits), Expect = 0.00073, P = 0.00073
Identities = 26/67 (38%), Positives = 39/67 (58%)
Query: 117 TAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENSLL 176
TAEQ+ +E F+ + ++R +L++QL L+ QVK WFQNRRT+ K Q + +
Sbjct: 111 TAEQLYRLELEFQRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQKKDQTKDTDKRS 170
Query: 177 KSEIEKL 183
S E L
Sbjct: 171 SSTSESL 177
>UNIPROTKB|D2H028 [details] [associations]
symbol:PANDA_002743 "Putative uncharacterized protein"
species:9646 "Ailuropoda melanoleuca" [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=ISS]
[GO:0000988 "protein binding transcription factor activity"
evidence=ISS] [GO:0001047 "core promoter binding" evidence=ISS]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0004882 "androgen
receptor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=ISS]
[GO:0007431 "salivary gland development" evidence=ISS] [GO:0008284
"positive regulation of cell proliferation" evidence=ISS]
[GO:0008285 "negative regulation of cell proliferation"
evidence=ISS] [GO:0010628 "positive regulation of gene expression"
evidence=ISS] [GO:0010942 "positive regulation of cell death"
evidence=ISS] [GO:0014068 "positive regulation of
phosphatidylinositol 3-kinase cascade" evidence=ISS] [GO:0030284
"estrogen receptor activity" evidence=ISS] [GO:0030295 "protein
kinase activator activity" evidence=ISS] [GO:0030331 "estrogen
receptor binding" evidence=ISS] [GO:0030521 "androgen receptor
signaling pathway" evidence=ISS] [GO:0033574 "response to
testosterone stimulus" evidence=ISS] [GO:0043280 "positive
regulation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=ISS] [GO:0043491 "protein kinase B
signaling cascade" evidence=ISS] [GO:0043569 "negative regulation
of insulin-like growth factor receptor signaling pathway"
evidence=ISS] [GO:0043621 "protein self-association" evidence=ISS]
[GO:0045860 "positive regulation of protein kinase activity"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=ISS] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0048754 "branching morphogenesis of an
epithelial tube" evidence=ISS] [GO:0050680 "negative regulation of
epithelial cell proliferation" evidence=ISS] [GO:0051781 "positive
regulation of cell division" evidence=ISS] [GO:0060442 "branching
involved in prostate gland morphogenesis" evidence=ISS] [GO:0060664
"epithelial cell proliferation involved in salivary gland
morphogenesis" evidence=ISS] [GO:0060770 "negative regulation of
epithelial cell proliferation involved in prostate gland
development" evidence=ISS] [GO:0071383 "cellular response to
steroid hormone stimulus" evidence=ISS] [GO:0071899 "negative
regulation of estrogen receptor binding" evidence=ISS] [GO:2000836
"positive regulation of androgen secretion" evidence=ISS]
[GO:2001022 "positive regulation of response to DNA damage
stimulus" evidence=ISS] [GO:2001244 "positive regulation of
intrinsic apoptotic signaling pathway" evidence=ISS]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0045892 GO:GO:0045931 GO:GO:0008284
GO:GO:0051781 GO:GO:0045944 GO:GO:0014068 GO:GO:0030295
GO:GO:0043621 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0006919 GO:GO:0010942 GO:GO:0033574
GO:GO:0001047 GO:GO:0043491 GO:GO:0000976 GO:GO:0004882
GO:GO:0030331 GO:GO:0060770 GO:GO:2001244 GO:GO:0043569
GO:GO:0048754 GO:GO:2001022 GO:GO:0060442 GO:GO:0000988
GO:GO:0030284 GO:GO:0060664 HOGENOM:HOG000231923 GO:GO:0071899
GO:GO:2000836 EMBL:GL192401 Uniprot:D2H028
Length = 140
Score = 101 (40.6 bits), Expect = 0.00076, P = 0.00076
Identities = 29/82 (35%), Positives = 40/82 (48%)
Query: 116 HTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHE-NS 174
HT Q+ E+E F + +R L+K L L QVK WFQNRR + K Q +
Sbjct: 39 HT--QVIELERKFSHQKYLSAPERAHLAKNLKLTETQVKIWFQNRRYKTKRKQLTSDLGD 96
Query: 175 LLK-SEIEKLREENKAMREAIN 195
L K S + L+EE + I+
Sbjct: 97 LEKHSSLPALKEEGLSQASPIS 118
>ZFIN|ZDB-GENE-980526-6 [details] [associations]
symbol:eng1b "engrailed 1b" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0048663 "neuron fate commitment" evidence=IEP]
InterPro:IPR000747 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00026 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-980526-6 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048663
GeneTree:ENSGT00680000099870 PROSITE:PS00033 eggNOG:NOG238866
HOVERGEN:HBG005975 InterPro:IPR019549 InterPro:IPR019737
Pfam:PF10525 HOGENOM:HOG000247054 KO:K09319 OrthoDB:EOG4H72D0
EMBL:BX908756 EMBL:CU861653 EMBL:BC091669 IPI:IPI00555352
RefSeq:NP_001013516.1 UniGene:Dr.79493 SMR:Q5BJ08
Ensembl:ENSDART00000016642 GeneID:541371 KEGG:dre:541371 CTD:541371
InParanoid:Q5BJ08 OMA:LPHQAAQ NextBio:20879183 Uniprot:Q5BJ08
Length = 274
Score = 116 (45.9 bits), Expect = 0.00077, Sum P(2) = 0.00077
Identities = 21/49 (42%), Positives = 36/49 (73%)
Query: 117 TAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIK 165
TAEQ++ ++A F+ + + E++RQ L+++L L Q+K WFQN+R +IK
Sbjct: 192 TAEQLQRLKAEFQANRYITEQRRQSLAQELNLNESQIKIWFQNKRAKIK 240
Score = 41 (19.5 bits), Expect = 0.00077, Sum P(2) = 0.00077
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 7 SNNPPTSRTKDFFASPALSLSLAGIFRGAGASAAAN 42
SN S + +SP+ S F G G++AA N
Sbjct: 91 SNCSSDSTSSSSSSSPSSKQSSVKHFEGNGSTAARN 126
>ZFIN|ZDB-GENE-030904-9 [details] [associations]
symbol:vax1 "ventral anterior homeobox 1"
species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0061386 "closure of optic fissure"
evidence=IMP] [GO:0060041 "retina development in camera-type eye"
evidence=IMP] [GO:0090259 "regulation of retinal ganglion cell axon
guidance" evidence=IMP] [GO:0021554 "optic nerve development"
evidence=IMP] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-030904-9 GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0060041 GO:GO:0000976
GO:GO:0061386 eggNOG:NOG323848 GeneTree:ENSGT00680000099870
GO:GO:0021554 CTD:11023 HOGENOM:HOG000049217 HOVERGEN:HBG007558
KO:K09318 EMBL:AY185348 EMBL:BC065951 IPI:IPI00512062
RefSeq:NP_919391.2 UniGene:Dr.134046 ProteinModelPortal:Q801E0
STRING:Q801E0 Ensembl:ENSDART00000031490 GeneID:373870
KEGG:dre:373870 InParanoid:Q801E0 OrthoDB:EOG4QVCD6
NextBio:20813407 Bgee:Q801E0 GO:GO:0090259 Uniprot:Q801E0
Length = 317
Score = 117 (46.2 bits), Expect = 0.00078, P = 0.00078
Identities = 41/146 (28%), Positives = 69/146 (47%)
Query: 117 TAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENSLL 176
TAEQ+ +E F+ + ++R +L++QL L+ QVK WFQNRRT+ K +++ ++S L
Sbjct: 100 TAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQK--KDQGKDSEL 157
Query: 177 KSEIE---------KLREENKAMREAINKACCPNCG---MATTSRDTSMTTEEQQLRIEN 224
+S + +L E+ + + P+CG + + R S+ +
Sbjct: 158 RSVVSETAATCSVLRLLEQGRLLTPPGLPGLLPHCGSSSLGSALRGPSLGITANGGSSSS 217
Query: 225 ARLKAEVEKLRAAVGKCPPGATSTSS 250
+R A G PP T TSS
Sbjct: 218 SRSSAGSS---GTAGGSPPLPTVTSS 240
>ZFIN|ZDB-GENE-990415-4 [details] [associations]
symbol:hoxa11b "homeo box A11b" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-990415-4 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 eggNOG:NOG274734
HOGENOM:HOG000231898 HOVERGEN:HBG052048 KO:K09296
InterPro:IPR021918 Pfam:PF12045 OrthoDB:EOG4KKZ3X EMBL:AF287137
EMBL:DQ060539 EMBL:Y07698 IPI:IPI00487877 RefSeq:NP_571222.1
UniGene:Dr.85393 ProteinModelPortal:Q9DDU1 SMR:Q9DDU1 GeneID:30382
KEGG:dre:30382 CTD:30382 InParanoid:Q9DDU1 NextBio:20806797
ArrayExpress:Q9DDU1 Uniprot:Q9DDU1
Length = 283
Score = 116 (45.9 bits), Expect = 0.00079, P = 0.00079
Identities = 25/52 (48%), Positives = 35/52 (67%)
Query: 116 HTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTI 167
+T QIRE+E F S + ++++R QLS+ L L RQVK WFQNRR + K +
Sbjct: 218 YTKYQIRELEREFFFSVYINKEKRLQLSRMLNLTDRQVKIWFQNRRMKEKKL 269
>UNIPROTKB|P56915 [details] [associations]
symbol:GSC "Homeobox protein goosecoid" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0021904 "dorsal/ventral neural tube patterning" evidence=IEA]
[GO:0023019 "signal transduction involved in regulation of gene
expression" evidence=IEA] [GO:0030178 "negative regulation of Wnt
receptor signaling pathway" evidence=IEA] [GO:0030900 "forebrain
development" evidence=IEA] [GO:0048644 "muscle organ morphogenesis"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA] [GO:0007369 "gastrulation" evidence=NAS] [GO:0005634
"nucleus" evidence=NAS] [GO:0003677 "DNA binding" evidence=NAS]
[GO:0042474 "middle ear morphogenesis" evidence=ISS] [GO:0001085
"RNA polymerase II transcription factor binding" evidence=ISS]
[GO:0001103 "RNA polymerase II repressing transcription factor
binding" evidence=ISS] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0048644 GO:GO:0003677
GO:GO:0043565 GO:GO:0030900 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0000122
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0048704
GO:GO:0030178 GO:GO:0007369 GO:GO:0021904 GO:GO:0023019
GO:GO:0001103 GO:GO:0042474 HOGENOM:HOG000112823 CTD:145258
eggNOG:NOG247162 HOVERGEN:HBG005921 KO:K09324 OrthoDB:EOG46Q6T9
OMA:PVGPSCC EMBL:AY177407 EMBL:BC063580 IPI:IPI00011923 PIR:A54677
RefSeq:NP_776248.1 UniGene:Hs.440438 PDB:2DMU PDBsum:2DMU
ProteinModelPortal:P56915 SMR:P56915 STRING:P56915
PhosphoSite:P56915 DMDM:61252078 PRIDE:P56915
Ensembl:ENST00000238558 GeneID:145258 KEGG:hsa:145258
UCSC:uc001ydu.3 GeneCards:GC14M095234 HGNC:HGNC:4612 MIM:138890
neXtProt:NX_P56915 PharmGKB:PA29004 InParanoid:P56915
PhylomeDB:P56915 EvolutionaryTrace:P56915 GenomeRNAi:145258
NextBio:85059 Bgee:P56915 CleanEx:HS_GSC Genevestigator:P56915
GermOnline:ENSG00000133937 Uniprot:P56915
Length = 257
Score = 115 (45.5 bits), Expect = 0.00082, P = 0.00082
Identities = 32/89 (35%), Positives = 49/89 (55%)
Query: 114 HR--HTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRT----QIKTI 167
HR T EQ+ +E LF+E+ +PD R+QL++++ L +V+ WF+NRR Q ++
Sbjct: 163 HRTIFTDEQLEALENLFQETKYPDVGTREQLARKVHLREEKVEVWFKNRRAKWRRQKRSS 222
Query: 168 QERHEN-------SLLKSEIEKLREENKA 189
E EN S K+ EK EE K+
Sbjct: 223 SEESENAEKWNKTSSSKASPEKREEEGKS 251
>UNIPROTKB|A1YEY5 [details] [associations]
symbol:GSC "Homeobox protein goosecoid" species:9595
"Gorilla gorilla gorilla" [GO:0042474 "middle ear morphogenesis"
evidence=ISS] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0042474 HOVERGEN:HBG005921
OrthoDB:EOG46Q6T9 EMBL:DQ976489 RefSeq:XP_004055692.1
ProteinModelPortal:A1YEY5 SMR:A1YEY5 GeneID:101153454 OMA:PVGPSCC
Uniprot:A1YEY5
Length = 257
Score = 115 (45.5 bits), Expect = 0.00082, P = 0.00082
Identities = 32/89 (35%), Positives = 49/89 (55%)
Query: 114 HR--HTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRT----QIKTI 167
HR T EQ+ +E LF+E+ +PD R+QL++++ L +V+ WF+NRR Q ++
Sbjct: 163 HRTIFTDEQLEALENLFQETKYPDVGTREQLARKVHLREEKVEVWFKNRRAKWRRQKRSS 222
Query: 168 QERHEN-------SLLKSEIEKLREENKA 189
E EN S K+ EK EE K+
Sbjct: 223 SEESENAEKWNKTSSSKASPEKREEEGKS 251
>UNIPROTKB|A1YFI3 [details] [associations]
symbol:GSC "Homeobox protein goosecoid" species:78454
"Saguinus labiatus" [GO:0042474 "middle ear morphogenesis"
evidence=ISS] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0042474 HOVERGEN:HBG005921
EMBL:DQ976992 ProteinModelPortal:A1YFI3 SMR:A1YFI3 Uniprot:A1YFI3
Length = 257
Score = 115 (45.5 bits), Expect = 0.00082, P = 0.00082
Identities = 32/89 (35%), Positives = 49/89 (55%)
Query: 114 HR--HTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRT----QIKTI 167
HR T EQ+ +E LF+E+ +PD R+QL++++ L +V+ WF+NRR Q ++
Sbjct: 163 HRTIFTDEQLEALENLFQETKYPDVGTREQLARKVHLREEKVEVWFKNRRAKWRRQKRSS 222
Query: 168 QERHEN-------SLLKSEIEKLREENKA 189
E EN S K+ EK EE K+
Sbjct: 223 SEESENAEKWNKTSSSKASPEKREEEGKS 251
>UNIPROTKB|A1YG57 [details] [associations]
symbol:GSC "Homeobox protein goosecoid" species:9597 "Pan
paniscus" [GO:0042474 "middle ear morphogenesis" evidence=ISS]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0042474 CTD:145258 HOVERGEN:HBG005921
KO:K09324 EMBL:DQ977221 RefSeq:XP_003832877.1
ProteinModelPortal:A1YG57 SMR:A1YG57 GeneID:100995285
KEGG:pps:100995285 Uniprot:A1YG57
Length = 257
Score = 115 (45.5 bits), Expect = 0.00082, P = 0.00082
Identities = 32/89 (35%), Positives = 49/89 (55%)
Query: 114 HR--HTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRT----QIKTI 167
HR T EQ+ +E LF+E+ +PD R+QL++++ L +V+ WF+NRR Q ++
Sbjct: 163 HRTIFTDEQLEALENLFQETKYPDVGTREQLARKVHLREEKVEVWFKNRRAKWRRQKRSS 222
Query: 168 QERHEN-------SLLKSEIEKLREENKA 189
E EN S K+ EK EE K+
Sbjct: 223 SEESENAEKWNKTSSSKASPEKREEEGKS 251
>UNIPROTKB|A2T733 [details] [associations]
symbol:GSC "Homeobox protein goosecoid" species:9598 "Pan
troglodytes" [GO:0042474 "middle ear morphogenesis" evidence=ISS]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0048644 GO:GO:0043565 GO:GO:0030900 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0000122
GO:GO:0048704 GO:GO:0030178 GO:GO:0021904 GO:GO:0023019
GO:GO:0042474 HOGENOM:HOG000112823 CTD:145258 eggNOG:NOG247162
HOVERGEN:HBG005921 KO:K09324 OrthoDB:EOG46Q6T9 OMA:PVGPSCC
GeneTree:ENSGT00700000104273 EMBL:DQ977363 RefSeq:NP_001074955.1
UniGene:Ptr.6559 ProteinModelPortal:A2T733 SMR:A2T733
Ensembl:ENSPTRT00000012313 GeneID:467546 KEGG:ptr:467546
InParanoid:A2T733 NextBio:20845425 Uniprot:A2T733
Length = 257
Score = 115 (45.5 bits), Expect = 0.00082, P = 0.00082
Identities = 32/89 (35%), Positives = 49/89 (55%)
Query: 114 HR--HTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRT----QIKTI 167
HR T EQ+ +E LF+E+ +PD R+QL++++ L +V+ WF+NRR Q ++
Sbjct: 163 HRTIFTDEQLEALENLFQETKYPDVGTREQLARKVHLREEKVEVWFKNRRAKWRRQKRSS 222
Query: 168 QERHEN-------SLLKSEIEKLREENKA 189
E EN S K+ EK EE K+
Sbjct: 223 SEESENAEKWNKTSSSKASPEKREEEGKS 251
>UNIPROTKB|A2T7P4 [details] [associations]
symbol:GSC "Homeobox protein goosecoid" species:9600 "Pongo
pygmaeus" [GO:0042474 "middle ear morphogenesis" evidence=ISS]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0042474 HOGENOM:HOG000112823 eggNOG:NOG247162
HOVERGEN:HBG005921 OrthoDB:EOG46Q6T9 EMBL:DQ977514
ProteinModelPortal:A2T7P4 SMR:A2T7P4 InParanoid:A2T7P4
Uniprot:A2T7P4
Length = 257
Score = 115 (45.5 bits), Expect = 0.00082, P = 0.00082
Identities = 32/89 (35%), Positives = 49/89 (55%)
Query: 114 HR--HTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRT----QIKTI 167
HR T EQ+ +E LF+E+ +PD R+QL++++ L +V+ WF+NRR Q ++
Sbjct: 163 HRTIFTDEQLEALENLFQETKYPDVGTREQLARKVHLREEKVEVWFKNRRAKWRRQKRSS 222
Query: 168 QERHEN-------SLLKSEIEKLREENKA 189
E EN S K+ EK EE K+
Sbjct: 223 SEESENAEKWNKTSSSKASPEKREEEGKS 251
>TAIR|locus:2115215 [details] [associations]
symbol:HB40 "homeobox protein 40" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009733 "response
to auxin stimulus" evidence=IEP] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0009733 GO:GO:0006950 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AL161589 GO:GO:0000976
KO:K09338 HSSP:P10037 HOGENOM:HOG000034122 EMBL:Z99708
EMBL:BX827896 IPI:IPI00520900 PIR:H85433 RefSeq:NP_195392.2
UniGene:At.50404 ProteinModelPortal:O23208 SMR:O23208 PRIDE:O23208
EnsemblPlants:AT4G36740.1 GeneID:829827 KEGG:ath:AT4G36740
GeneFarm:3980 TAIR:At4g36740 eggNOG:NOG244411 InParanoid:O23208
OMA:NSYIDEA PhylomeDB:O23208 Genevestigator:O23208 Uniprot:O23208
Length = 216
Score = 113 (44.8 bits), Expect = 0.00082, P = 0.00082
Identities = 26/80 (32%), Positives = 46/80 (57%)
Query: 117 TAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENSLL 176
T EQ+ +E F + + +++ +L+ +LGL PRQV WFQNRR + K + E + L
Sbjct: 60 TDEQVNMLEMSFGDEHKLESERKDRLAAELGLDPRQVAVWFQNRRARWKNKRLEEEYNKL 119
Query: 177 KSE-----IEKLREENKAMR 191
K+ ++K R E++ ++
Sbjct: 120 KNSHDNVVVDKCRLESEVIQ 139
>POMBASE|SPBC21B10.13c [details] [associations]
symbol:yox1 "MBF complex negative regulatory component
Yox1" species:4896 "Schizosaccharomyces pombe" [GO:0000083
"regulation of transcription involved in G1/S phase of mitotic cell
cycle" evidence=IC;TAS] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0000978 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding" evidence=IC;IMP] [GO:0001078 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in negative
regulation of transcription" evidence=NAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;IPI]
[GO:0030907 "MBF transcription complex" evidence=NAS] [GO:0043565
"sequence-specific DNA binding" evidence=ISM] [GO:0071276 "cellular
response to cadmium ion" evidence=IMP] [GO:0071585 "detoxification
of cadmium ion" evidence=IMP] [GO:0071930 "negative regulation of
transcription involved in G1/S phase of mitotic cell cycle"
evidence=IMP] [GO:0071931 "positive regulation of transcription
involved in G1/S phase of mitotic cell cycle" evidence=IMP]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS50071
SMART:SM00389 PomBase:SPBC21B10.13c EMBL:CU329671 GO:GO:0071276
GO:GO:0071585 GO:GO:0001078 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000978 GO:GO:0030907 GO:GO:0071931 eggNOG:COG5576
GO:GO:0071930 EMBL:L14773 OrthoDB:EOG4NKG55 PIR:S50010
RefSeq:NP_595674.1 ProteinModelPortal:P40923 STRING:P40923
EnsemblFungi:SPBC21B10.13c.1 GeneID:2540309 KEGG:spo:SPBC21B10.13c
NextBio:20801438 Uniprot:P40923
Length = 201
Score = 112 (44.5 bits), Expect = 0.00083, P = 0.00083
Identities = 28/93 (30%), Positives = 48/93 (51%)
Query: 115 RHTAEQIREMEALFKESPHPDEKQRQQLSKQL--GLAPRQVKFWFQNRRTQIKTIQERHE 172
R T + +E F ++P P +RQ+LSK+L + PR+++ WFQN+R + R
Sbjct: 39 RTTDAEATLLEQYFLKTPKPSLIERQELSKKLKSSMTPRELQIWFQNKRQSL-----RRS 93
Query: 173 NSLLKSEIEKLREENKAMREAINKACCPNCGMA 205
N L ++ +E E + R++ C + G A
Sbjct: 94 NCLSRNRLEGTGENSLLRRKSTLTLCETSTGQA 126
>UNIPROTKB|Q9UIW0 [details] [associations]
symbol:VAX2 "Ventral anterior homeobox 2" species:9606
"Homo sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0007409 "axonogenesis" evidence=IEA]
[GO:0009950 "dorsal/ventral axis specification" evidence=IEA]
[GO:0031490 "chromatin DNA binding" evidence=IEA] [GO:0048048
"embryonic eye morphogenesis" evidence=IEA] [GO:0060041 "retina
development in camera-type eye" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0030900 "forebrain development" evidence=ISS]
[GO:0007398 "ectoderm development" evidence=TAS] [GO:0007601
"visual perception" evidence=TAS] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0005737 EMBL:CH471053
GO:GO:0016055 GO:GO:0007601 GO:GO:0030900 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0060041 GO:GO:0007409
GO:GO:0048048 GO:GO:0000976 GO:GO:0007398 GO:GO:0031490
GO:GO:0009950 eggNOG:NOG309408 HOGENOM:HOG000049217
HOVERGEN:HBG007558 KO:K09318 OrthoDB:EOG4QVCD6 CTD:25806
EMBL:Y17791 EMBL:BT007035 EMBL:BC006336 IPI:IPI00018903
RefSeq:NP_036608.1 UniGene:Hs.249170 ProteinModelPortal:Q9UIW0
SMR:Q9UIW0 STRING:Q9UIW0 PhosphoSite:Q9UIW0 DMDM:20532295
PaxDb:Q9UIW0 PRIDE:Q9UIW0 DNASU:25806 Ensembl:ENST00000234392
GeneID:25806 KEGG:hsa:25806 UCSC:uc002shh.3 GeneCards:GC02P071127
HGNC:HGNC:12661 MIM:604295 neXtProt:NX_Q9UIW0 PharmGKB:PA37284
InParanoid:Q9UIW0 OMA:LGEADHC PhylomeDB:Q9UIW0 GenomeRNAi:25806
NextBio:47023 ArrayExpress:Q9UIW0 Bgee:Q9UIW0 CleanEx:HS_VAX2
Genevestigator:Q9UIW0 GermOnline:ENSG00000116035 Uniprot:Q9UIW0
Length = 290
Score = 116 (45.9 bits), Expect = 0.00083, P = 0.00083
Identities = 24/54 (44%), Positives = 35/54 (64%)
Query: 117 TAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQER 170
TAEQ+ +E F+ + ++R +L++QL L+ QVK WFQNRRT+ K Q R
Sbjct: 110 TAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQKKDQSR 163
>MGI|MGI:1346018 [details] [associations]
symbol:Vax2 "ventral anterior homeobox containing gene 2"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007409
"axonogenesis" evidence=IMP] [GO:0009950 "dorsal/ventral axis
specification" evidence=IMP] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0030900 "forebrain development"
evidence=IMP] [GO:0031490 "chromatin DNA binding" evidence=IDA]
[GO:0043010 "camera-type eye development" evidence=IGI] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0048048
"embryonic eye morphogenesis" evidence=IDA;IMP] [GO:0060041 "retina
development in camera-type eye" evidence=IDA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 MGI:MGI:1346018 GO:GO:0005634 GO:GO:0005737
GO:GO:0016055 GO:GO:0030900 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000122 GO:GO:0060041 GO:GO:0007409 GO:GO:0048048
GO:GO:0000976 GO:GO:0031490 GO:GO:0009950 eggNOG:NOG309408
GeneTree:ENSGT00680000099870 HOGENOM:HOG000049217
HOVERGEN:HBG007558 KO:K09318 OrthoDB:EOG4QVCD6 CTD:25806
OMA:LGEADHC EMBL:AB020498 EMBL:Y17792 EMBL:AF028715 IPI:IPI00123684
RefSeq:NP_036042.1 UniGene:Mm.307165 ProteinModelPortal:Q9WTP9
SMR:Q9WTP9 STRING:Q9WTP9 PhosphoSite:Q9WTP9 PRIDE:Q9WTP9
Ensembl:ENSMUST00000037807 GeneID:24113 KEGG:mmu:24113
InParanoid:Q9WTP9 NextBio:304143 Bgee:Q9WTP9 CleanEx:MM_VAX2
Genevestigator:Q9WTP9 GermOnline:ENSMUSG00000034777 Uniprot:Q9WTP9
Length = 292
Score = 116 (45.9 bits), Expect = 0.00085, P = 0.00085
Identities = 24/54 (44%), Positives = 35/54 (64%)
Query: 117 TAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQER 170
TAEQ+ +E F+ + ++R +L++QL L+ QVK WFQNRRT+ K Q R
Sbjct: 110 TAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQKKDQSR 163
>UNIPROTKB|J9PBA6 [details] [associations]
symbol:LHX8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104050 EMBL:AAEX03004901 EMBL:AAEX03004902
Ensembl:ENSCAFT00000043981 Uniprot:J9PBA6
Length = 295
Score = 116 (45.9 bits), Expect = 0.00086, P = 0.00086
Identities = 28/98 (28%), Positives = 50/98 (51%)
Query: 117 TAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKT-IQERHENSL 175
TA+Q++ M+A F + +PD + Q+L+++ GL+ R ++ WFQN R + K + H +S
Sbjct: 172 TADQLQVMQAQFAQDNNPDAQTLQKLAERTGLSRRVIQVWFQNCRARHKKHVSPNHSSSA 231
Query: 176 LKSEIEKLREENKAMREAINKACCPNCGMATTSRDTSM 213
+ + R + E A P G T+ + M
Sbjct: 232 PVTAVPPSRLSPPMLEEMAYSAYVPQDGTMLTALHSYM 269
>UNIPROTKB|C8YLT4 [details] [associations]
symbol:Lhx8 "LIM homeobox 8" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IEA] [GO:0021884 "forebrain
neuron development" evidence=IEA] [GO:0008585 "female gonad
development" evidence=IEA] [GO:0007611 "learning or memory"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0008585 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0007611
Gene3D:2.10.110.10 GO:GO:0042475 GO:GO:0021884 eggNOG:NOG264882
GeneTree:ENSGT00700000104050 KO:K09375 CTD:431707 OMA:MYWKSDQ
EMBL:CU929623 EMBL:FJ587986 RefSeq:NP_001159787.1 UniGene:Ssc.78542
Ensembl:ENSSSCT00000004181 GeneID:100310798 KEGG:ssc:100310798
Uniprot:C8YLT4
Length = 295
Score = 116 (45.9 bits), Expect = 0.00086, P = 0.00086
Identities = 28/98 (28%), Positives = 50/98 (51%)
Query: 117 TAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKT-IQERHENSL 175
TA+Q++ M+A F + +PD + Q+L+++ GL+ R ++ WFQN R + K + H +S
Sbjct: 172 TADQLQVMQAQFAQDNNPDAQTLQKLAERTGLSRRVIQVWFQNCRARHKKHVSPNHSSSA 231
Query: 176 LKSEIEKLREENKAMREAINKACCPNCGMATTSRDTSM 213
+ + R + E A P G T+ + M
Sbjct: 232 PVTAVPPSRLSPPMLEEMAYSAYVPQDGTMLTALHSYM 269
>UNIPROTKB|H9L184 [details] [associations]
symbol:Gga.48067 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0002011
"morphogenesis of an epithelial sheet" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0048103 "somatic stem cell division"
evidence=IEA] [GO:0048536 "spleen development" evidence=IEA]
[GO:0048539 "bone marrow development" evidence=IEA] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IEA] [GO:0060216
"definitive hemopoiesis" evidence=IEA] [GO:0060218 "hematopoietic
stem cell differentiation" evidence=IEA] [GO:2000738 "positive
regulation of stem cell differentiation" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 EMBL:AADN02014570
Ensembl:ENSGALT00000029853 OMA:MANTIPP Uniprot:H9L184
Length = 102
Score = 96 (38.9 bits), Expect = 0.00087, P = 0.00087
Identities = 20/63 (31%), Positives = 38/63 (60%)
Query: 116 HTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENSL 175
+T +Q+ E+E F + + ++R +++ L L+ RQ+K WFQNRR + K + N+
Sbjct: 17 YTRQQVLELEKEFHYNRYLTRRRRVEIAHSLCLSERQIKIWFQNRRMKWKK-DHKLPNTK 75
Query: 176 LKS 178
++S
Sbjct: 76 IRS 78
>UNIPROTKB|D6RAR5 [details] [associations]
symbol:D6RAR5 "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 EMBL:AC004080
HOGENOM:HOG000294138 IPI:IPI00382764 ProteinModelPortal:D6RAR5
SMR:D6RAR5 Ensembl:ENST00000470747 Uniprot:D6RAR5
Length = 112
Score = 96 (38.9 bits), Expect = 0.00087, P = 0.00087
Identities = 20/54 (37%), Positives = 32/54 (59%)
Query: 116 HTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQE 169
+T Q E+E F + + +R ++++ L L RQVK WFQNRR ++K I +
Sbjct: 53 YTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKINK 106
>UNIPROTKB|F1SHT6 [details] [associations]
symbol:F1SHT6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104054 EMBL:CU480612
ProteinModelPortal:F1SHT6 SMR:F1SHT6 Ensembl:ENSSSCT00000018180
OMA:RRYEISQ Uniprot:F1SHT6
Length = 93
Score = 96 (38.9 bits), Expect = 0.00087, P = 0.00087
Identities = 19/56 (33%), Positives = 33/56 (58%)
Query: 116 HTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERH 171
+T Q E+E F + + ++R ++S+ + L RQVK WFQNRR ++K + +
Sbjct: 26 YTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRRMKLKKMNREN 81
>UNIPROTKB|G3ECA1 [details] [associations]
symbol:HoxA10 "Homebox A10" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 KO:K09295
GeneTree:ENSGT00700000104054 EMBL:CU570959 EMBL:HQ700342
RefSeq:NP_001231267.1 UniGene:Ssc.100927 UniGene:Ssc.26254
SMR:G3ECA1 Ensembl:ENSSSCT00000028043 GeneID:100620451
KEGG:ssc:100620451 OMA:GNTKGEN Uniprot:G3ECA1
Length = 94
Score = 96 (38.9 bits), Expect = 0.00087, P = 0.00087
Identities = 19/56 (33%), Positives = 33/56 (58%)
Query: 116 HTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERH 171
+T Q E+E F + + ++R ++S+ + L RQVK WFQNRR ++K + +
Sbjct: 27 YTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRRMKLKKMNREN 82
>UNIPROTKB|P09078 [details] [associations]
symbol:HOXB8 "Homeobox protein Hox-B8" species:9823 "Sus
scrofa" [GO:0045638 "negative regulation of myeloid cell
differentiation" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
GO:GO:0045638 EMBL:X06668 ProteinModelPortal:P09078 SMR:P09078
Uniprot:P09078
Length = 93
Score = 96 (38.9 bits), Expect = 0.00087, P = 0.00087
Identities = 21/51 (41%), Positives = 32/51 (62%)
Query: 120 QIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQER 170
Q E+E F+ +P+ K+ ++S LGL RQ+K WFQNRR + K ++R
Sbjct: 18 QTLELEKEFQCNPYLTCKRWIEVSHALGLTERQIKIWFQNRRMKWKKREQR 68
>UNIPROTKB|F1NMY3 [details] [associations]
symbol:HOXB8 "Homeobox protein Hox-B8" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007625
"grooming behavior" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0019233 "sensory perception of
pain" evidence=IEA] [GO:0021516 "dorsal spinal cord development"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000976 GeneTree:ENSGT00700000104332
OMA:MERAQEV EMBL:AADN02070205 EMBL:AADN02070206 EMBL:AADN02027051
EMBL:AADN02027057 EMBL:AADN02027058 EMBL:AADN02027059
EMBL:AADN02027047 EMBL:AADN02027048 EMBL:AADN02027049
EMBL:AADN02027050 EMBL:AADN02027052 EMBL:AADN02027053
EMBL:AADN02027054 EMBL:AADN02027055 EMBL:AADN02027056
EMBL:AADN02027060 EMBL:AADN02027061 EMBL:AADN02027062
EMBL:AADN02027063 EMBL:AADN02027064 EMBL:AADN02027065
EMBL:AADN02027066 EMBL:AADN02027067 EMBL:AADN02027068
EMBL:AADN02027069 EMBL:AADN02070203 EMBL:AADN02070204
EMBL:AADN02073361 IPI:IPI00572938 Ensembl:ENSGALT00000028037
Uniprot:F1NMY3
Length = 240
Score = 114 (45.2 bits), Expect = 0.00088, P = 0.00088
Identities = 27/73 (36%), Positives = 41/73 (56%)
Query: 120 QIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENSLLKSE 179
Q E+E F +P+ K+R ++S LGL RQVK WFQNRR + K + + K E
Sbjct: 155 QTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNKDKFPSSKCE 214
Query: 180 IEKLREENKAMRE 192
E+L ++ + +E
Sbjct: 215 QEELEKQMERAQE 227
>MGI|MGI:96189 [details] [associations]
symbol:Hoxb8 "homeobox B8" species:10090 "Mus musculus"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007625 "grooming behavior" evidence=IMP]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0009952
"anterior/posterior pattern specification" evidence=IGI;IMP]
[GO:0019233 "sensory perception of pain" evidence=IMP] [GO:0021516
"dorsal spinal cord development" evidence=IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045638 "negative
regulation of myeloid cell differentiation" evidence=IDA]
[GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IGI;IMP] [GO:0048705 "skeletal system morphogenesis"
evidence=IGI;IMP] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 MGI:MGI:96189 GO:GO:0005634
GO:GO:0009952 GO:GO:0019233 GO:GO:0008344 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOGENOM:HOG000231181 GO:GO:0048704 GO:GO:0000976
GO:GO:0007625 GO:GO:0045638 GO:GO:0021516 HOVERGEN:HBG016849
GeneTree:ENSGT00700000104332 eggNOG:NOG314669 OrthoDB:EOG4H464V
CTD:3218 KO:K09308 OMA:MERAQEV EMBL:X13961 EMBL:X13721 EMBL:M18399
EMBL:X54077 IPI:IPI00108997 PIR:S03712 RefSeq:NP_034591.1
UniGene:Mm.4822 ProteinModelPortal:P09632 SMR:P09632 DIP:DIP-35618N
IntAct:P09632 STRING:P09632 PhosphoSite:P09632 PRIDE:P09632
Ensembl:ENSMUST00000052650 Ensembl:ENSMUST00000168043 GeneID:15416
KEGG:mmu:15416 InParanoid:P09632 NextBio:288150 Bgee:P09632
CleanEx:MM_HOXB8 Genevestigator:P09632
GermOnline:ENSMUSG00000056648 Uniprot:P09632
Length = 243
Score = 114 (45.2 bits), Expect = 0.00091, P = 0.00091
Identities = 27/67 (40%), Positives = 38/67 (56%)
Query: 120 QIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENSLLKSE 179
Q E+E F +P+ K+R ++S LGL RQVK WFQNRR + K + + K E
Sbjct: 157 QTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNKDKFPSSKCE 216
Query: 180 IEKLREE 186
E+L +E
Sbjct: 217 QEELEKE 223
>UNIPROTKB|G3V6Y1 [details] [associations]
symbol:Hoxb8 "Homeo box B8 (Mapped)" species:10116 "Rattus
norvegicus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007625
"grooming behavior" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0019233 "sensory perception of
pain" evidence=IEA] [GO:0021516 "dorsal spinal cord development"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 RGD:1586211 GO:GO:0007275
GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976 EMBL:CH473948
GeneTree:ENSGT00700000104332 CTD:3218 KO:K09308 OMA:MERAQEV
UniGene:Rn.231433 RefSeq:NP_001178578.1 ProteinModelPortal:G3V6Y1
SMR:G3V6Y1 Ensembl:ENSRNOT00000009986 GeneID:24457 KEGG:rno:24457
NextBio:603373 Uniprot:G3V6Y1
Length = 243
Score = 114 (45.2 bits), Expect = 0.00091, P = 0.00091
Identities = 27/67 (40%), Positives = 38/67 (56%)
Query: 120 QIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENSLLKSE 179
Q E+E F +P+ K+R ++S LGL RQVK WFQNRR + K + + K E
Sbjct: 157 QTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNKDKFPSSKCE 216
Query: 180 IEKLREE 186
E+L +E
Sbjct: 217 QEELEKE 223
>WB|WBGene00001174 [details] [associations]
symbol:egl-5 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0018991 "oviposition" evidence=IMP]
[GO:0030163 "protein catabolic process" evidence=IMP] [GO:0009952
"anterior/posterior pattern specification" evidence=IMP]
[GO:0030155 "regulation of cell adhesion" evidence=IMP] [GO:0045138
"tail tip morphogenesis" evidence=IMP] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0008134 "transcription factor binding"
evidence=IPI] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0018991 GO:GO:0030155
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 KO:K09300
GO:GO:0000122 GO:GO:0030163 GO:GO:0045138 EMBL:L19247 EMBL:FO080429
EMBL:X17075 PIR:A40722 PIR:S44613 RefSeq:NP_001021166.1
RefSeq:NP_001021167.1 RefSeq:NP_498697.3 UniGene:Cel.19646
ProteinModelPortal:P17486 SMR:P17486 STRING:P17486
EnsemblMetazoa:C08C3.1b GeneID:176093 KEGG:cel:CELE_C08C3.1
UCSC:C08C3.1b CTD:176093 WormBase:C08C3.1a WormBase:C08C3.1b
WormBase:C08C3.1c eggNOG:NOG323773 GeneTree:ENSGT00700000104189
HOGENOM:HOG000015889 InParanoid:P17486 OMA:KFQQSSY NextBio:891082
Uniprot:P17486
Length = 223
Score = 113 (44.8 bits), Expect = 0.00091, P = 0.00091
Identities = 24/58 (41%), Positives = 36/58 (62%)
Query: 113 YHRHTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQER 170
Y R+ Q +EA F++S + +KQR++L Q L RQ+K WFQNRR + K ++R
Sbjct: 119 YQRY---QTSVLEAKFQQSSYVSKKQREELRLQTQLTDRQIKIWFQNRRMKAKKEKQR 173
>WB|WBGene00000446 [details] [associations]
symbol:ceh-23 species:6239 "Caenorhabditis elegans"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 EMBL:FO080278
eggNOG:NOG257690 GeneTree:ENSGT00680000099625 EMBL:L19249
PIR:S44907 RefSeq:NP_498700.1 ProteinModelPortal:P34663 SMR:P34663
STRING:P34663 EnsemblMetazoa:ZK652.5 GeneID:176096
KEGG:cel:CELE_ZK652.5 UCSC:ZK652.5 CTD:176096 WormBase:ZK652.5
HOGENOM:HOG000076961 InParanoid:P34663 OMA:KARTIYG NextBio:891100
Uniprot:P34663
Length = 305
Score = 116 (45.9 bits), Expect = 0.00093, P = 0.00093
Identities = 22/70 (31%), Positives = 47/70 (67%)
Query: 120 QIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQ-ERHENSLLKS 178
Q +++E +FK + +R+ L+++LGL+P QV+ WFQNRR++ + Q E +++ L+
Sbjct: 222 QTQQLEDMFKGQMYVVGAERENLAQRLGLSPSQVRIWFQNRRSKHRRKQQEEQQSTTLEE 281
Query: 179 EIEKLREENK 188
+ E++ ++ +
Sbjct: 282 KSEEIGKDEE 291
>UNIPROTKB|F1SAC8 [details] [associations]
symbol:NOBOX "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 OMA:CPQALGH
GeneTree:ENSGT00650000093445 EMBL:FP089699 EMBL:FP565161
Ensembl:ENSSSCT00000016847 Ensembl:ENSSSCT00000029776
Uniprot:F1SAC8
Length = 472
Score = 119 (46.9 bits), Expect = 0.00093, P = 0.00093
Identities = 16/54 (29%), Positives = 40/54 (74%)
Query: 116 HTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQE 169
+ ++Q+ E+E F+E +PD ++R+++++ + +AP+++ WFQNRR + + +++
Sbjct: 195 YRSDQLEELEKFFQEDHYPDSEKRREIAQTVNVAPQRIMVWFQNRRAKWRKVEK 248
>UNIPROTKB|Q8NHV9 [details] [associations]
symbol:RHOXF1 "Rhox homeobox family member 1" species:9606
"Homo sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=NAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0003677 "DNA
binding" evidence=NAS] [GO:0007275 "multicellular organismal
development" evidence=NAS] [GO:0019953 "sexual reproduction"
evidence=IEP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0007276 "gamete generation"
evidence=NAS] [GO:0030518 "intracellular steroid hormone receptor
signaling pathway" evidence=NAS] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000976 GO:GO:0007276 GO:GO:0030518 EMBL:AC005023
EMBL:AY099086 EMBL:BC069324 EMBL:BC069529 EMBL:BC103857
EMBL:BC103858 IPI:IPI00169348 RefSeq:NP_644811.1 UniGene:Hs.644617
ProteinModelPortal:Q8NHV9 SMR:Q8NHV9 IntAct:Q8NHV9 STRING:Q8NHV9
DMDM:37537960 PRIDE:Q8NHV9 DNASU:158800 Ensembl:ENST00000217999
GeneID:158800 KEGG:hsa:158800 UCSC:uc004esk.1 CTD:158800
GeneCards:GC0XM119243 HGNC:HGNC:29993 MIM:300446 neXtProt:NX_Q8NHV9
PharmGKB:PA162401287 eggNOG:NOG257474 HOGENOM:HOG000154120
InParanoid:Q8NHV9 OMA:NKRARCR OrthoDB:EOG4FFD33 PhylomeDB:Q8NHV9
GenomeRNAi:158800 NextBio:87811 Bgee:Q8NHV9 CleanEx:HS_RHOXF1
Genevestigator:Q8NHV9 GermOnline:ENSG00000101883 Uniprot:Q8NHV9
Length = 184
Score = 110 (43.8 bits), Expect = 0.00094, P = 0.00094
Identities = 19/62 (30%), Positives = 40/62 (64%)
Query: 115 RHTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENS 174
+ T Q+ E+E++F+ + +PD R++L++ LG+ +V+ WF+N+R + + RH+
Sbjct: 109 KFTLLQVEELESVFRHTQYPDVPTRRELAENLGVTEDKVRVWFKNKRARCR----RHQRE 164
Query: 175 LL 176
L+
Sbjct: 165 LM 166
>UNIPROTKB|Q8AWG6 [details] [associations]
symbol:hhex "Hematopoietically-expressed homeobox protein
hhex" species:8364 "Xenopus (Silurana) tropicalis" [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0001570 "vasculogenesis" evidence=ISS]
[GO:0001889 "liver development" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0007507 "heart development" evidence=ISS]
[GO:0009952 "anterior/posterior pattern specification"
evidence=ISS] [GO:0030177 "positive regulation of Wnt receptor
signaling pathway" evidence=ISS] [GO:0035162 "embryonic
hemopoiesis" evidence=ISS] [GO:0043565 "sequence-specific DNA
binding" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0007507
GO:GO:0016055 GO:GO:0009952 GO:GO:0043565 GO:GO:0001889
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0001570
GO:GO:0030177 GO:GO:0035162 eggNOG:NOG252905 CTD:3087
HOGENOM:HOG000049110 HOVERGEN:HBG055460 KO:K08024 OrthoDB:EOG4XKV7W
HSSP:P22808 EMBL:AY160969 EMBL:CR761571 RefSeq:NP_989420.1
UniGene:Str.111 ProteinModelPortal:Q8AWG6 SMR:Q8AWG6 STRING:Q8AWG6
GeneID:395060 KEGG:xtr:395060 Xenbase:XB-GENE-487159
InParanoid:Q8AWG6 Uniprot:Q8AWG6
Length = 274
Score = 115 (45.5 bits), Expect = 0.00095, P = 0.00095
Identities = 34/111 (30%), Positives = 55/111 (49%)
Query: 115 RHTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKTIQERHENS 174
R + +Q E+E F+ + +R++L+K L L+ RQVK WFQNRR + + +++ +
Sbjct: 145 RFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRRLKQENPQG 204
Query: 175 LLKSEIEKLREENKAMREAINKACCPNCGMATTSRD--TSMTTEEQQLRIE 223
K E E L EN E+ + +S D TS T ++ L E
Sbjct: 205 NKKDETESL--EN-ICEESQERCLSAEQKSRESSLDEPTSSPTSQETLDSE 252
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.129 0.375 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 764 717 0.00084 121 3 11 22 0.42 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 207
No. of states in DFA: 628 (67 KB)
Total size of DFA: 377 KB (2185 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 65.87u 0.11s 65.98t Elapsed: 00:00:03
Total cpu time: 65.89u 0.12s 66.01t Elapsed: 00:00:03
Start: Mon May 20 20:51:19 2013 End: Mon May 20 20:51:22 2013
WARNINGS ISSUED: 1