Query 004275
Match_columns 764
No_of_seqs 775 out of 4900
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 19:58:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004275.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004275hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 100.0 3.7E-42 1.3E-46 411.9 30.7 266 29-315 9-382 (768)
2 4eco_A Uncharacterized protein 100.0 3.8E-40 1.3E-44 385.9 24.1 340 32-385 30-505 (636)
3 1ogq_A PGIP-2, polygalacturona 100.0 3.3E-40 1.1E-44 352.5 18.2 301 28-367 2-312 (313)
4 4ecn_A Leucine-rich repeat pro 100.0 7.1E-39 2.4E-43 382.2 27.7 323 29-367 266-717 (876)
5 3rgz_A Protein brassinosteroid 100.0 9.4E-38 3.2E-42 373.8 21.1 282 85-366 269-557 (768)
6 4eco_A Uncharacterized protein 100.0 7.8E-35 2.7E-39 340.8 18.4 284 96-387 194-532 (636)
7 3v47_A TOLL-like receptor 5B a 100.0 1.7E-33 5.9E-38 316.5 21.1 300 85-384 30-412 (455)
8 1ogq_A PGIP-2, polygalacturona 100.0 9.9E-34 3.4E-38 302.2 13.4 232 109-366 50-287 (313)
9 3j0a_A TOLL-like receptor 5; m 100.0 1.5E-31 5E-36 323.4 33.6 277 85-361 24-376 (844)
10 2id5_A Lingo-1, leucine rich r 100.0 3.8E-32 1.3E-36 307.6 23.6 298 70-367 13-316 (477)
11 3v47_A TOLL-like receptor 5B a 100.0 2E-32 6.9E-37 307.7 18.9 282 84-365 53-413 (455)
12 2z81_A CD282 antigen, TOLL-lik 100.0 1.7E-31 5.9E-36 307.5 22.3 307 70-380 6-444 (549)
13 3t6q_A CD180 antigen; protein- 100.0 4E-31 1.4E-35 308.2 25.7 295 85-381 33-414 (606)
14 4ecn_A Leucine-rich repeat pro 100.0 1.5E-31 5.1E-36 319.1 21.7 274 84-366 447-772 (876)
15 2z7x_B TOLL-like receptor 1, v 100.0 4.5E-31 1.5E-35 302.1 22.0 273 85-365 21-417 (520)
16 2id5_A Lingo-1, leucine rich r 100.0 6.5E-31 2.2E-35 297.4 21.3 279 84-362 55-335 (477)
17 3vq2_A TLR4, TOLL-like recepto 100.0 9.7E-31 3.3E-35 305.0 23.1 138 85-222 32-170 (606)
18 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 1.8E-30 6.1E-35 300.0 24.7 274 85-364 52-467 (562)
19 4fcg_A Uncharacterized protein 100.0 3.1E-31 1.1E-35 284.7 16.8 278 29-338 24-314 (328)
20 3t6q_A CD180 antigen; protein- 100.0 2.3E-30 7.9E-35 301.9 25.5 279 86-366 255-542 (606)
21 3j0a_A TOLL-like receptor 5; m 100.0 3.1E-30 1.1E-34 311.8 25.5 274 84-360 47-394 (844)
22 3vq2_A TLR4, TOLL-like recepto 100.0 3.5E-30 1.2E-34 300.4 22.9 300 84-385 55-515 (606)
23 3o6n_A APL1; leucine-rich repe 100.0 9.2E-30 3.1E-34 280.2 22.1 284 85-377 45-349 (390)
24 3oja_B Anopheles plasmodium-re 100.0 1.4E-29 4.9E-34 294.4 24.4 284 85-377 51-355 (597)
25 1ziw_A TOLL-like receptor 3; i 100.0 2.9E-29 1E-33 296.6 26.4 282 85-366 25-348 (680)
26 2z63_A TOLL-like receptor 4, v 100.0 1.4E-29 4.6E-34 292.9 22.1 133 86-218 29-162 (570)
27 2z7x_B TOLL-like receptor 1, v 100.0 1.8E-29 6.3E-34 288.7 22.9 285 88-384 3-416 (520)
28 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 8.5E-29 2.9E-33 285.9 24.6 157 88-253 34-195 (562)
29 2ft3_A Biglycan; proteoglycan, 100.0 1.1E-28 3.7E-33 265.5 23.1 272 85-367 33-316 (332)
30 2ft3_A Biglycan; proteoglycan, 100.0 2E-28 6.9E-33 263.4 25.1 266 85-358 54-331 (332)
31 1xku_A Decorin; proteoglycan, 100.0 1.5E-28 5.1E-33 264.2 23.9 266 86-361 32-307 (330)
32 4g8a_A TOLL-like receptor 4; l 100.0 1.1E-28 3.7E-33 288.6 24.4 284 85-368 52-563 (635)
33 1xku_A Decorin; proteoglycan, 100.0 3.3E-28 1.1E-32 261.5 25.8 267 85-358 52-330 (330)
34 2z63_A TOLL-like receptor 4, v 100.0 7.7E-29 2.6E-33 286.6 21.9 112 85-196 52-164 (570)
35 2z80_A TOLL-like receptor 2, v 100.0 1.7E-29 5.9E-34 274.2 14.5 254 110-364 53-318 (353)
36 2z81_A CD282 antigen, TOLL-lik 100.0 6E-29 2.1E-33 286.3 19.7 136 84-219 49-210 (549)
37 1ziw_A TOLL-like receptor 3; i 100.0 5.3E-28 1.8E-32 285.8 27.3 279 87-365 224-554 (680)
38 4fcg_A Uncharacterized protein 100.0 5E-28 1.7E-32 259.7 22.0 236 107-362 79-316 (328)
39 3o6n_A APL1; leucine-rich repe 100.0 4.9E-28 1.7E-32 266.4 22.1 267 85-362 69-354 (390)
40 2z66_A Variable lymphocyte rec 100.0 1.3E-28 4.4E-33 261.7 14.8 258 109-367 28-294 (306)
41 3oja_B Anopheles plasmodium-re 100.0 7.2E-28 2.5E-32 280.0 22.1 268 85-362 75-360 (597)
42 3bz5_A Internalin-J, INLJ; leu 100.0 4.4E-27 1.5E-31 263.8 24.6 256 85-365 42-304 (457)
43 2z66_A Variable lymphocyte rec 100.0 3.1E-28 1.1E-32 258.7 14.0 275 70-345 9-294 (306)
44 3bz5_A Internalin-J, INLJ; leu 99.9 1.2E-26 3.9E-31 260.4 25.0 272 85-381 64-353 (457)
45 2z80_A TOLL-like receptor 2, v 99.9 6.2E-28 2.1E-32 261.9 13.8 258 85-342 52-318 (353)
46 4fmz_A Internalin; leucine ric 99.9 1.7E-26 5.8E-31 249.8 25.1 261 85-364 66-328 (347)
47 1ozn_A Reticulon 4 receptor; N 99.9 5E-27 1.7E-31 246.8 19.7 254 88-368 14-269 (285)
48 3zyi_A Leucine-rich repeat-con 99.9 7.4E-27 2.5E-31 262.2 22.3 246 90-340 59-305 (452)
49 4fmz_A Internalin; leucine ric 99.9 1E-26 3.5E-31 251.5 22.4 260 84-360 87-346 (347)
50 1o6v_A Internalin A; bacterial 99.9 2.3E-26 7.9E-31 259.2 25.7 258 85-363 68-325 (466)
51 1o6v_A Internalin A; bacterial 99.9 3.4E-26 1.2E-30 257.9 27.0 276 85-381 46-323 (466)
52 1wwl_A Monocyte differentiatio 99.9 6.4E-29 2.2E-33 264.9 4.3 241 88-338 46-309 (312)
53 3zyj_A Leucine-rich repeat-con 99.9 1.2E-26 4E-31 259.6 22.9 247 89-340 47-294 (440)
54 1jl5_A Outer protein YOPM; leu 99.9 7.3E-27 2.5E-31 261.7 19.5 264 85-378 11-288 (454)
55 4g8a_A TOLL-like receptor 4; l 99.9 6.9E-26 2.4E-30 264.9 28.1 156 91-249 37-193 (635)
56 3zyi_A Leucine-rich repeat-con 99.9 2.8E-26 9.5E-31 257.5 22.5 247 111-362 56-305 (452)
57 3zyj_A Leucine-rich repeat-con 99.9 3.4E-26 1.2E-30 255.9 23.1 246 111-361 45-293 (440)
58 1ozn_A Reticulon 4 receptor; N 99.9 7.6E-27 2.6E-31 245.4 15.7 236 85-345 32-268 (285)
59 3o53_A Protein LRIM1, AGAP0063 99.9 3.3E-28 1.1E-32 260.0 4.7 271 86-370 11-286 (317)
60 1wwl_A Monocyte differentiatio 99.9 4.8E-28 1.6E-32 258.1 3.4 249 105-362 39-311 (312)
61 1jl5_A Outer protein YOPM; leu 99.9 8.5E-25 2.9E-29 244.9 27.6 321 85-477 91-416 (454)
62 3oja_A Leucine-rich immune mol 99.9 2.1E-26 7.3E-31 260.4 8.5 227 105-345 30-258 (487)
63 2z62_A TOLL-like receptor 4, v 99.9 1.4E-24 4.8E-29 227.0 19.7 220 100-342 21-241 (276)
64 2o6q_A Variable lymphocyte rec 99.9 4.5E-24 1.5E-28 222.4 21.0 213 70-315 7-219 (270)
65 3o53_A Protein LRIM1, AGAP0063 99.9 4.7E-26 1.6E-30 243.3 3.6 245 85-343 34-281 (317)
66 3oja_A Leucine-rich immune mol 99.9 2.4E-25 8E-30 251.9 8.0 235 85-333 34-270 (487)
67 3g06_A SSPH2 (leucine-rich rep 99.9 1.1E-23 3.7E-28 243.5 17.6 236 86-362 41-276 (622)
68 2o6q_A Variable lymphocyte rec 99.9 2E-22 6.8E-27 209.9 24.0 206 110-342 17-222 (270)
69 2z62_A TOLL-like receptor 4, v 99.9 5.1E-23 1.7E-27 215.1 17.9 224 113-364 11-241 (276)
70 3rfs_A Internalin B, repeat mo 99.9 8.8E-23 3E-27 212.9 19.2 206 85-301 41-246 (272)
71 3rfs_A Internalin B, repeat mo 99.9 6.6E-23 2.2E-27 213.8 16.1 207 105-346 37-243 (272)
72 1z7x_W Ribonuclease inhibitor; 99.9 1E-25 3.5E-30 253.4 -7.4 276 86-361 86-412 (461)
73 1p9a_G Platelet glycoprotein I 99.9 4.8E-22 1.6E-26 209.2 20.5 204 105-339 6-209 (290)
74 1p9a_G Platelet glycoprotein I 99.9 4.4E-22 1.5E-26 209.5 19.6 199 85-314 10-208 (290)
75 2ast_B S-phase kinase-associat 99.9 8.8E-24 3E-28 227.3 4.2 261 70-366 39-312 (336)
76 4glp_A Monocyte differentiatio 99.9 3.2E-22 1.1E-26 212.8 14.7 224 109-338 64-307 (310)
77 3goz_A Leucine-rich repeat-con 99.9 8.2E-24 2.8E-28 230.2 0.7 253 90-362 3-299 (362)
78 3m19_A Variable lymphocyte rec 99.9 2.2E-21 7.5E-26 199.7 18.7 210 133-369 14-231 (251)
79 2ca6_A RAN GTPase-activating p 99.9 6.7E-24 2.3E-28 233.0 -0.9 244 101-364 24-320 (386)
80 3g06_A SSPH2 (leucine-rich rep 99.9 3.9E-21 1.3E-25 222.1 22.0 242 85-367 61-304 (622)
81 3m19_A Variable lymphocyte rec 99.9 2E-21 6.9E-26 200.0 17.2 185 70-265 7-191 (251)
82 2ast_B S-phase kinase-associat 99.9 4E-24 1.4E-28 230.0 -3.5 179 85-264 70-258 (336)
83 1z7x_W Ribonuclease inhibitor; 99.9 2.2E-24 7.6E-29 242.4 -5.9 278 85-362 3-328 (461)
84 2xwt_C Thyrotropin receptor; s 99.9 1.9E-21 6.6E-26 198.5 15.9 203 100-335 25-236 (239)
85 4glp_A Monocyte differentiatio 99.9 7.1E-22 2.4E-26 210.1 12.4 223 86-315 65-308 (310)
86 2ca6_A RAN GTPase-activating p 99.9 6.5E-24 2.2E-28 233.1 -3.9 234 85-342 32-320 (386)
87 2xwt_C Thyrotropin receptor; s 99.9 2.1E-21 7.3E-26 198.2 14.9 178 85-265 31-217 (239)
88 1h6u_A Internalin H; cell adhe 99.9 7.7E-21 2.6E-25 201.9 17.7 192 107-338 39-230 (308)
89 3goz_A Leucine-rich repeat-con 99.9 3E-23 1E-27 225.8 -1.1 233 113-365 2-271 (362)
90 1h6u_A Internalin H; cell adhe 99.8 1.5E-20 5.1E-25 199.6 16.6 192 84-315 40-231 (308)
91 3cvr_A Invasion plasmid antige 99.8 5.1E-21 1.8E-25 218.5 11.6 217 48-323 35-252 (571)
92 2o6s_A Variable lymphocyte rec 99.8 8E-20 2.7E-24 182.3 18.5 181 88-302 10-190 (208)
93 4ay9_X Follicle-stimulating ho 99.8 8.5E-20 2.9E-24 197.5 17.3 238 90-335 14-256 (350)
94 3cvr_A Invasion plasmid antige 99.8 7.1E-20 2.4E-24 209.1 16.7 184 134-345 60-250 (571)
95 2o6s_A Variable lymphocyte rec 99.8 1.1E-19 3.7E-24 181.3 12.7 178 70-254 9-190 (208)
96 4ay9_X Follicle-stimulating ho 99.8 3.9E-19 1.3E-23 192.3 16.1 238 112-356 12-255 (350)
97 3e6j_A Variable lymphocyte rec 99.8 3.9E-18 1.3E-22 172.8 17.5 143 100-245 33-175 (229)
98 4b8c_D Glucose-repressible alc 99.8 9.8E-20 3.4E-24 215.3 5.2 258 29-338 129-404 (727)
99 1m9s_A Internalin B; cell inva 99.8 2.3E-18 7.9E-23 198.7 14.9 173 105-291 39-211 (605)
100 3ogk_B Coronatine-insensitive 99.8 1.7E-20 6E-25 217.6 -3.4 149 87-237 166-350 (592)
101 2v9t_B SLIT homolog 2 protein 99.8 8.4E-18 2.9E-22 169.2 16.4 152 89-243 15-166 (220)
102 2v70_A SLIT-2, SLIT homolog 2 99.8 7.3E-18 2.5E-22 169.7 15.8 155 88-245 14-169 (220)
103 1h6t_A Internalin B; cell adhe 99.8 4E-18 1.4E-22 179.3 13.5 146 106-263 43-188 (291)
104 2xot_A Amphoterin-induced prot 99.7 6.3E-18 2.2E-22 183.6 14.5 174 88-264 21-200 (361)
105 2v9t_B SLIT homolog 2 protein 99.7 1.7E-17 5.8E-22 167.0 16.2 150 112-264 14-163 (220)
106 2v70_A SLIT-2, SLIT homolog 2 99.7 1.5E-17 5.3E-22 167.3 15.8 150 112-264 14-164 (220)
107 1h6t_A Internalin B; cell adhe 99.7 1.1E-17 3.6E-22 176.1 14.9 186 114-339 29-214 (291)
108 4asz_A BDNF/NT-3 growth factor 99.7 1.1E-18 3.9E-23 183.3 6.6 91 659-749 13-109 (299)
109 4aoj_A High affinity nerve gro 99.7 3.2E-18 1.1E-22 182.4 10.1 91 659-749 41-137 (329)
110 1m9s_A Internalin B; cell inva 99.7 2.1E-17 7.1E-22 190.7 16.6 180 85-278 43-222 (605)
111 2xot_A Amphoterin-induced prot 99.7 1.2E-17 4.2E-22 181.3 13.3 176 112-314 21-202 (361)
112 3e6j_A Variable lymphocyte rec 99.7 6E-17 2.1E-21 164.0 16.8 149 112-264 22-170 (229)
113 4ezg_A Putative uncharacterize 99.7 3.9E-17 1.4E-21 161.3 13.9 150 107-263 42-191 (197)
114 1dce_A Protein (RAB geranylger 99.7 2.7E-20 9.1E-25 213.5 -10.4 188 105-315 345-547 (567)
115 4gt4_A Tyrosine-protein kinase 99.7 6.1E-18 2.1E-22 178.6 8.4 90 660-749 27-123 (308)
116 3ogk_B Coronatine-insensitive 99.7 2.8E-19 9.6E-24 207.4 -4.1 277 85-362 192-528 (592)
117 4ezg_A Putative uncharacterize 99.7 5.4E-17 1.8E-21 160.3 12.7 152 85-243 44-195 (197)
118 1dce_A Protein (RAB geranylger 99.7 1.7E-19 6E-24 206.8 -10.9 201 130-354 346-567 (567)
119 1xeu_A Internalin C; cellular 99.7 6.1E-17 2.1E-21 167.6 9.1 144 108-264 18-161 (263)
120 4fih_A Serine/threonine-protei 99.7 4.2E-17 1.5E-21 173.8 7.9 106 659-764 74-193 (346)
121 4b9d_A Serine/threonine-protei 99.7 1E-16 3.4E-21 171.2 10.4 106 659-764 24-148 (350)
122 4fie_A Serine/threonine-protei 99.7 9E-17 3.1E-21 175.6 8.7 107 658-764 150-270 (423)
123 4b8c_D Glucose-repressible alc 99.7 2.6E-17 8.9E-22 194.5 4.4 190 100-315 215-405 (727)
124 1xeu_A Internalin C; cellular 99.7 7.5E-17 2.6E-21 166.9 7.3 171 131-340 17-187 (263)
125 3omv_A RAF proto-oncogene seri 99.7 1.7E-16 5.8E-21 166.9 9.8 104 658-764 35-155 (307)
126 1w8a_A SLIT protein; signaling 99.6 6.2E-16 2.1E-20 152.0 12.6 131 88-221 11-142 (192)
127 1w8a_A SLIT protein; signaling 99.6 7.9E-16 2.7E-20 151.2 12.7 132 112-246 11-143 (192)
128 2ell_A Acidic leucine-rich nuc 99.6 6E-16 2.1E-20 148.5 11.4 133 108-242 23-160 (168)
129 4aw0_A HPDK1, 3-phosphoinositi 99.6 1E-16 3.4E-21 168.3 6.3 106 659-764 32-155 (311)
130 3fpq_A Serine/threonine-protei 99.6 6.3E-16 2.1E-20 161.3 8.7 103 662-764 29-154 (290)
131 2p1m_B Transport inhibitor res 99.6 3.5E-17 1.2E-21 189.8 -1.2 182 179-362 287-496 (594)
132 4g31_A Eukaryotic translation 99.6 8.6E-16 2.9E-20 161.6 9.0 106 659-764 5-141 (299)
133 2je0_A Acidic leucine-rich nuc 99.6 1.4E-15 4.7E-20 142.9 9.5 127 133-261 17-148 (149)
134 2je0_A Acidic leucine-rich nuc 99.6 7E-16 2.4E-20 144.8 7.3 127 109-237 17-148 (149)
135 2ell_A Acidic leucine-rich nuc 99.6 3.5E-15 1.2E-19 143.1 11.4 132 131-264 22-158 (168)
136 4ase_A Vascular endothelial gr 99.6 5.3E-16 1.8E-20 166.7 6.0 100 650-749 55-163 (353)
137 3hyh_A Carbon catabolite-derep 99.6 1.3E-15 4.4E-20 157.6 8.6 105 659-764 13-135 (275)
138 4g3f_A NF-kappa-beta-inducing 99.6 5.7E-16 2E-20 164.5 6.2 101 659-764 58-173 (336)
139 2p1m_B Transport inhibitor res 99.6 2.6E-17 8.9E-22 190.8 -5.6 178 86-263 106-324 (594)
140 2wfh_A SLIT homolog 2 protein 99.6 1.1E-14 3.8E-19 143.1 14.0 127 88-218 13-139 (193)
141 2wfh_A SLIT homolog 2 protein 99.6 1.3E-14 4.3E-19 142.7 13.3 128 112-243 13-140 (193)
142 3ubd_A Ribosomal protein S6 ki 99.6 4.5E-16 1.5E-20 163.3 2.8 106 659-764 24-149 (304)
143 3hmm_A TGF-beta receptor type- 99.6 3.7E-15 1.3E-19 157.3 9.5 89 660-750 4-96 (303)
144 2o6r_A Variable lymphocyte rec 99.6 2.3E-14 7.9E-19 138.6 14.2 131 87-220 9-139 (177)
145 2o6r_A Variable lymphocyte rec 99.5 2.7E-14 9.1E-19 138.2 13.2 133 111-246 9-141 (177)
146 3sb4_A Hypothetical leucine ri 99.5 1.7E-14 5.9E-19 154.3 11.4 240 85-331 25-327 (329)
147 3uto_A Twitchin; kinase, muscl 99.5 1.9E-14 6.3E-19 165.1 10.5 107 658-764 156-278 (573)
148 4b99_A Mitogen-activated prote 99.5 2.1E-14 7.1E-19 156.9 8.2 105 659-764 54-181 (398)
149 1ds9_A Outer arm dynein; leuci 99.5 4E-16 1.4E-20 154.1 -6.0 147 108-259 17-180 (198)
150 1a9n_A U2A', U2A'; complex (nu 99.5 5.4E-14 1.8E-18 136.0 8.4 132 105-242 15-153 (176)
151 3sb4_A Hypothetical leucine ri 99.5 3E-14 1E-18 152.4 7.1 249 107-366 23-316 (329)
152 2c30_A Serine/threonine-protei 99.5 1.2E-13 4E-18 147.2 11.6 119 646-764 22-164 (321)
153 1ds9_A Outer arm dynein; leuci 99.5 2.2E-16 7.6E-21 156.0 -9.7 149 87-242 20-185 (198)
154 4f9c_A Cell division cycle 7-r 99.4 9.5E-14 3.3E-18 149.9 8.9 107 656-764 18-140 (361)
155 2qkw_B Protein kinase; three-h 99.4 2.9E-14 9.9E-19 151.9 3.5 115 650-764 30-162 (321)
156 1a9n_A U2A', U2A'; complex (nu 99.4 1.7E-13 5.9E-18 132.4 8.5 130 128-263 14-150 (176)
157 4aw2_A Serine/threonine-protei 99.4 1E-13 3.5E-18 153.8 7.4 115 650-764 65-198 (437)
158 3s95_A LIMK-1, LIM domain kina 99.4 4.1E-13 1.4E-17 142.1 10.9 106 659-764 10-131 (310)
159 3uim_A Brassinosteroid insensi 99.4 1E-13 3.4E-18 147.9 6.1 104 647-750 18-122 (326)
160 4fdw_A Leucine rich hypothetic 99.4 4.2E-12 1.4E-16 139.1 18.9 251 96-358 123-381 (401)
161 3v5w_A G-protein coupled recep 99.4 1.8E-13 6.2E-18 156.5 8.2 106 659-764 189-315 (689)
162 3fxz_A Serine/threonine-protei 99.4 3.9E-13 1.3E-17 141.5 10.0 107 658-764 19-139 (297)
163 3g39_A Variable lymphocyte rec 99.4 1.1E-12 3.8E-17 125.9 11.9 107 87-196 11-117 (170)
164 4fdw_A Leucine rich hypothetic 99.4 1E-11 3.6E-16 136.0 20.3 248 107-366 111-364 (401)
165 3fe3_A MAP/microtubule affinit 99.4 5E-13 1.7E-17 142.8 9.4 107 658-764 14-137 (328)
166 2nru_A Interleukin-1 receptor- 99.4 9E-13 3.1E-17 139.2 11.2 117 647-764 13-156 (307)
167 3g39_A Variable lymphocyte rec 99.4 1.8E-12 6.2E-17 124.4 12.1 105 111-218 11-115 (170)
168 3uqc_A Probable conserved tran 99.4 7.3E-13 2.5E-17 138.6 9.7 106 659-764 31-152 (286)
169 2qol_A Ephrin receptor; recept 99.4 3.6E-13 1.2E-17 146.7 7.4 106 659-764 45-170 (373)
170 2r9u_A Variable lymphocyte rec 99.4 2.8E-12 9.4E-17 123.6 12.2 105 88-195 15-119 (174)
171 4hcu_A Tyrosine-protein kinase 99.4 1.2E-12 4.2E-17 135.3 10.3 105 659-764 10-129 (269)
172 2r9u_A Variable lymphocyte rec 99.4 3.2E-12 1.1E-16 123.2 11.7 104 112-218 15-118 (174)
173 3kul_A Ephrin type-A receptor 99.4 7.7E-13 2.7E-17 141.1 8.1 106 659-764 49-174 (325)
174 2yab_A Death-associated protei 99.3 1.3E-12 4.4E-17 141.4 9.8 107 658-764 11-138 (361)
175 3v8s_A RHO-associated protein 99.3 4.3E-13 1.5E-17 147.6 6.1 114 651-764 61-191 (410)
176 3zgw_A Maternal embryonic leuc 99.3 1E-12 3.4E-17 141.4 8.5 108 657-764 8-131 (347)
177 2psq_A Fibroblast growth facto 99.3 9.2E-13 3.1E-17 143.2 8.0 92 658-749 80-181 (370)
178 3qd2_B Eukaryotic translation 99.3 1.8E-12 6.1E-17 138.2 9.7 106 659-764 6-187 (332)
179 1o6l_A RAC-beta serine/threoni 99.3 1E-12 3.5E-17 140.9 7.7 106 659-764 5-128 (337)
180 3cbl_A C-FES, proto-oncogene t 99.3 5.6E-13 1.9E-17 145.3 5.5 107 658-764 113-236 (377)
181 3ugc_A Tyrosine-protein kinase 99.3 8.8E-13 3E-17 138.4 6.8 106 659-764 10-137 (295)
182 2vd5_A DMPK protein; serine/th 99.3 6.4E-13 2.2E-17 146.3 5.9 115 650-764 52-185 (412)
183 2x4f_A Myosin light chain kina 99.3 9.3E-13 3.2E-17 143.3 7.0 104 661-764 91-210 (373)
184 4eqm_A Protein kinase; transfe 99.3 2E-12 6.8E-17 135.8 9.3 107 658-764 10-134 (294)
185 1tki_A Titin; serine kinase, m 99.3 3.3E-12 1.1E-16 136.0 11.1 106 658-764 4-125 (321)
186 4fvq_A Tyrosine-protein kinase 99.3 1.4E-12 4.6E-17 136.4 8.0 106 659-764 8-136 (289)
187 2bdw_A Hypothetical protein K1 99.3 2.3E-12 7.8E-17 139.6 9.9 107 658-764 28-151 (362)
188 2y0a_A Death-associated protei 99.3 2.5E-12 8.5E-17 137.3 9.8 106 659-764 11-137 (326)
189 3vhe_A Vascular endothelial gr 99.3 7.3E-13 2.5E-17 143.2 5.7 101 649-749 12-121 (359)
190 1kob_A Twitchin; kinase, intra 99.3 2.4E-12 8.3E-17 140.6 9.8 107 658-764 50-172 (387)
191 2ac3_A MAP kinase-interacting 99.3 3E-12 1E-16 135.7 10.0 106 659-764 12-134 (316)
192 3gen_A Tyrosine-protein kinase 99.3 2E-12 6.9E-17 134.7 8.2 106 658-764 23-143 (283)
193 3sxs_A Cytoplasmic tyrosine-pr 99.3 1.5E-12 5E-17 134.6 7.1 106 658-764 7-127 (268)
194 1luf_A Muscle-specific tyrosin 99.3 3.1E-12 1.1E-16 137.3 9.9 93 657-749 45-144 (343)
195 3a62_A Ribosomal protein S6 ki 99.3 1.8E-12 6.1E-17 138.4 8.0 107 658-764 16-144 (327)
196 1qcf_A Haematopoetic cell kina 99.3 1.4E-12 4.9E-17 145.8 7.3 108 655-764 184-307 (454)
197 3p86_A Serine/threonine-protei 99.3 1.3E-12 4.5E-17 138.3 6.6 108 656-764 34-162 (309)
198 3f3z_A Calcium/calmodulin-depe 99.3 1.9E-12 6.3E-17 134.6 7.6 107 658-764 8-129 (277)
199 3uc3_A Serine/threonine-protei 99.3 2.5E-12 8.7E-17 139.3 8.7 106 658-764 19-139 (361)
200 1fot_A TPK1 delta, CAMP-depend 99.3 1.9E-12 6.4E-17 137.7 7.5 106 659-764 6-129 (318)
201 3c0i_A Peripheral plasma membr 99.3 1.5E-12 5.1E-17 140.5 6.7 106 659-764 24-153 (351)
202 2w4o_A Calcium/calmodulin-depe 99.3 2.5E-12 8.5E-17 138.6 8.4 105 658-764 52-171 (349)
203 3txo_A PKC-L, NPKC-ETA, protei 99.3 2.4E-12 8.1E-17 138.9 7.9 107 658-764 22-147 (353)
204 3l9p_A Anaplastic lymphoma kin 99.3 1.7E-12 6E-17 140.9 6.8 106 659-764 71-204 (367)
205 3hko_A Calcium/calmodulin-depe 99.3 1.1E-12 3.7E-17 141.0 4.8 93 655-747 22-120 (345)
206 3tki_A Serine/threonine-protei 99.3 2E-12 6.7E-17 137.9 6.6 107 658-764 6-128 (323)
207 3t9t_A Tyrosine-protein kinase 99.3 4.7E-12 1.6E-16 130.6 9.2 105 659-764 8-127 (267)
208 3a8x_A Protein kinase C IOTA t 99.3 3.6E-12 1.2E-16 137.2 8.5 106 659-764 9-133 (345)
209 4fr4_A YANK1, serine/threonine 99.3 2.7E-12 9.1E-17 139.9 7.5 106 659-764 15-138 (384)
210 4euu_A Serine/threonine-protei 99.3 4.8E-12 1.6E-16 134.5 9.0 106 659-764 9-135 (319)
211 3soa_A Calcium/calmodulin-depe 99.3 3.8E-12 1.3E-16 141.6 8.4 107 658-764 10-133 (444)
212 2jam_A Calcium/calmodulin-depe 99.3 4E-12 1.4E-16 134.1 8.1 106 659-764 9-129 (304)
213 2clq_A Mitogen-activated prote 99.3 9.4E-12 3.2E-16 130.3 11.0 104 661-764 24-145 (295)
214 2a2a_A Death-associated protei 99.3 5.4E-12 1.8E-16 134.3 9.1 106 659-764 12-138 (321)
215 1t46_A HOMO sapiens V-KIT hard 99.3 3.9E-12 1.3E-16 134.5 8.0 92 658-749 22-121 (313)
216 3kmu_A ILK, integrin-linked ki 99.3 3.3E-12 1.1E-16 131.9 7.2 92 659-751 10-105 (271)
217 3niz_A Rhodanese family protei 99.3 5.9E-12 2E-16 133.3 9.3 106 658-764 20-142 (311)
218 1opk_A P150, C-ABL, proto-onco 99.3 5.4E-12 1.9E-16 142.6 9.4 107 657-764 218-341 (495)
219 1xjd_A Protein kinase C, theta 99.3 3E-12 1E-16 137.6 7.0 108 657-764 15-141 (345)
220 2ivs_A Proto-oncogene tyrosine 99.3 4E-12 1.4E-16 134.5 7.8 92 658-749 22-120 (314)
221 2j7t_A Serine/threonine-protei 99.3 6.4E-12 2.2E-16 132.2 9.0 108 657-764 17-140 (302)
222 1rdq_E PKA C-alpha, CAMP-depen 99.3 3.5E-12 1.2E-16 137.4 7.1 106 659-764 41-164 (350)
223 1x8b_A WEE1HU, WEE1-like prote 99.3 5.2E-12 1.8E-16 131.5 8.0 107 658-764 10-138 (289)
224 2pvf_A Fibroblast growth facto 99.3 5.9E-12 2E-16 134.7 8.6 93 658-750 34-136 (334)
225 1p4o_A Insulin-like growth fac 99.3 1.3E-12 4.5E-17 138.9 3.3 115 650-764 16-161 (322)
226 4dc2_A Protein kinase C IOTA t 99.3 3.6E-12 1.2E-16 139.5 6.6 107 658-764 51-176 (396)
227 4agu_A Cyclin-dependent kinase 99.3 9.3E-12 3.2E-16 131.6 9.6 106 659-764 3-125 (311)
228 3kk8_A Calcium/calmodulin depe 99.3 8.6E-12 2.9E-16 129.9 9.2 107 658-764 5-128 (284)
229 3lxl_A Tyrosine-protein kinase 99.3 4.8E-12 1.7E-16 135.0 7.4 106 659-764 23-150 (327)
230 3bhy_A Death-associated protei 99.3 8.3E-12 2.8E-16 130.0 8.9 106 659-764 5-131 (283)
231 1k9a_A Carboxyl-terminal SRC k 99.2 1.1E-11 3.9E-16 138.2 10.6 104 658-764 192-312 (450)
232 3kn6_A Ribosomal protein S6 ki 99.2 9.1E-12 3.1E-16 132.8 9.3 98 664-764 16-129 (325)
233 3tt0_A Basic fibroblast growth 99.2 6.3E-12 2.1E-16 137.3 8.2 93 658-750 68-170 (382)
234 1ob3_A PFPK5, cell division co 99.2 1.2E-11 4.1E-16 129.3 10.0 105 659-764 2-123 (288)
235 2acx_A G protein-coupled recep 99.2 6.4E-12 2.2E-16 143.1 8.4 107 658-764 183-309 (576)
236 3ork_A Serine/threonine protei 99.2 2.2E-12 7.5E-17 136.6 4.3 107 658-764 11-139 (311)
237 3q5i_A Protein kinase; CDPK, m 99.2 7.8E-12 2.7E-16 141.8 9.1 107 658-764 35-169 (504)
238 3dtc_A Mitogen-activated prote 99.2 8.4E-12 2.9E-16 129.0 8.4 106 658-764 6-131 (271)
239 3soc_A Activin receptor type-2 99.2 5.1E-12 1.7E-16 134.6 6.7 91 658-750 23-117 (322)
240 3is5_A Calcium-dependent prote 99.2 5.8E-12 2E-16 131.6 6.9 106 659-764 22-147 (285)
241 3nyv_A Calmodulin-domain prote 99.2 9.3E-12 3.2E-16 140.4 9.0 106 659-764 26-149 (484)
242 1rjb_A FL cytokine receptor; k 99.2 6.9E-12 2.4E-16 134.7 7.6 93 657-749 43-143 (344)
243 2wqm_A Serine/threonine-protei 99.2 8.7E-12 3E-16 131.8 8.2 106 659-764 32-159 (310)
244 3gni_B Strad alpha; kinase fol 99.2 1.9E-11 6.6E-16 133.7 11.3 107 658-764 24-151 (389)
245 3lij_A Calcium/calmodulin depe 99.2 5.4E-12 1.9E-16 142.7 7.0 106 659-764 37-159 (494)
246 1fmk_A C-SRC, P60-SRC, tyrosin 99.2 7.5E-12 2.6E-16 139.9 8.0 107 656-764 181-303 (452)
247 3lxp_A Non-receptor tyrosine-p 99.2 1.9E-11 6.6E-16 129.8 10.8 104 661-764 33-157 (318)
248 3cok_A Serine/threonine-protei 99.2 8.2E-12 2.8E-16 129.7 7.6 106 659-764 11-135 (278)
249 4e5w_A Tyrosine-protein kinase 99.2 1.2E-11 4E-16 130.1 8.9 106 659-764 21-149 (302)
250 2h6d_A 5'-AMP-activated protei 99.2 1.2E-11 4.2E-16 128.2 8.8 107 658-764 10-134 (276)
251 3eqc_A Dual specificity mitoge 99.2 8.9E-12 3.1E-16 134.8 8.0 106 659-764 33-155 (360)
252 2yfx_A Tyrosine-protein kinase 99.2 1E-11 3.5E-16 132.4 8.4 107 658-764 29-163 (327)
253 2y94_A 5'-AMP-activated protei 99.2 5.5E-12 1.9E-16 141.3 6.5 106 659-764 16-139 (476)
254 2w1i_A JAK2; chromosomal rearr 99.2 1.2E-11 4.2E-16 131.8 8.9 106 659-764 41-168 (326)
255 2pmi_A Negative RE, cyclin-dep 99.2 4.5E-12 1.5E-16 134.7 5.4 106 658-764 4-131 (317)
256 2rku_A Serine/threonine-protei 99.2 1.1E-11 3.7E-16 130.0 8.2 107 658-764 14-138 (294)
257 3a7i_A MST3 kinase, serine/thr 99.2 1.7E-11 5.9E-16 129.0 9.8 107 658-764 21-142 (303)
258 4ejn_A RAC-alpha serine/threon 99.2 3.5E-12 1.2E-16 142.3 4.7 107 658-764 147-272 (446)
259 2ozo_A Tyrosine-protein kinase 99.2 1.2E-11 4.2E-16 143.3 9.4 98 666-764 343-459 (613)
260 2owb_A Serine/threonine-protei 99.2 1.1E-11 3.6E-16 132.9 8.2 107 658-764 40-164 (335)
261 3mwu_A Calmodulin-domain prote 99.2 7.7E-12 2.6E-16 141.2 7.5 106 659-764 22-144 (486)
262 3h4j_B AMPK kdaid, SNF1-like p 99.2 6.2E-12 2.1E-16 134.7 6.4 106 658-764 8-131 (336)
263 1u5q_A Serine/threonine protei 99.2 1E-11 3.5E-16 133.8 8.1 104 660-764 55-177 (348)
264 1phk_A Phosphorylase kinase; g 99.2 1.1E-11 3.9E-16 130.0 8.3 107 658-764 16-147 (298)
265 3gbz_A Kinase, CMGC CDK; ssgci 99.2 9.6E-12 3.3E-16 132.8 7.8 106 658-764 33-155 (329)
266 3kfa_A Tyrosine-protein kinase 99.2 5.2E-12 1.8E-16 131.9 5.6 107 657-764 11-134 (288)
267 4eut_A Serine/threonine-protei 99.2 9.4E-12 3.2E-16 136.6 7.9 106 659-764 9-135 (396)
268 2eva_A TAK1 kinase - TAB1 chim 99.2 7.5E-12 2.6E-16 132.3 6.8 101 659-764 8-128 (307)
269 3fdn_A Serine/threonine-protei 99.2 5.6E-12 1.9E-16 131.1 5.8 107 658-764 8-132 (279)
270 2h34_A Serine/threonine-protei 99.2 1.3E-11 4.5E-16 130.5 8.6 107 658-764 33-157 (309)
271 2i0e_A Protein kinase C-beta I 99.2 6.2E-12 2.1E-16 135.6 6.2 107 658-764 19-144 (353)
272 2zv2_A Calcium/calmodulin-depe 99.2 4.2E-12 1.4E-16 133.5 4.7 107 658-764 12-160 (298)
273 3i6u_A CDS1, serine/threonine- 99.2 6E-12 2.1E-16 139.2 6.1 107 657-764 133-262 (419)
274 3o0g_A Cell division protein k 99.2 1.8E-11 6E-16 128.3 9.3 105 659-764 2-124 (292)
275 2buj_A Serine/threonine-protei 99.2 6E-12 2E-16 133.5 5.7 107 658-764 28-157 (317)
276 1mqb_A Ephrin type-A receptor 99.2 1.9E-11 6.5E-16 130.8 9.5 106 659-764 44-170 (333)
277 2qr7_A Ribosomal protein S6 ki 99.2 8.8E-12 3E-16 133.9 6.9 103 658-764 21-139 (342)
278 1zy4_A Serine/threonine-protei 99.2 1.2E-11 4.2E-16 129.8 7.8 106 658-764 5-139 (303)
279 2h8h_A Proto-oncogene tyrosine 99.2 9.3E-12 3.2E-16 142.1 7.4 107 656-764 264-386 (535)
280 2xir_A Vascular endothelial gr 99.2 1.1E-11 3.9E-16 131.1 7.4 100 651-750 19-127 (316)
281 3e7e_A HBUB1, BUB1A, mitotic c 99.2 1.5E-11 5.1E-16 133.4 8.5 104 658-764 64-195 (365)
282 1mp8_A Focal adhesion kinase 1 99.2 2.3E-11 7.9E-16 126.6 9.5 106 658-764 14-139 (281)
283 3pg1_A Mitogen-activated prote 99.2 1.9E-11 6.4E-16 132.3 9.0 114 650-764 13-157 (362)
284 1u59_A Tyrosine-protein kinase 99.2 3.1E-11 1E-15 126.1 10.3 104 660-764 10-133 (287)
285 2y7j_A Phosphorylase B kinase 99.2 2.3E-11 7.9E-16 131.9 9.6 110 655-764 90-223 (365)
286 3gxj_A TGF-beta receptor type- 99.2 1.3E-11 4.4E-16 129.8 7.4 102 659-764 3-131 (303)
287 2eue_A Carbon catabolite derep 99.2 2.1E-11 7.2E-16 126.4 8.9 105 659-764 13-135 (275)
288 2r5t_A Serine/threonine-protei 99.2 6E-12 2E-16 136.8 4.9 106 659-764 38-162 (373)
289 1fvr_A Tyrosine-protein kinase 99.2 1.8E-11 6.1E-16 130.5 8.4 92 659-750 25-121 (327)
290 3p1a_A MYT1 kinase, membrane-a 99.2 1.3E-11 4.4E-16 130.7 7.2 105 659-764 57-180 (311)
291 3qup_A Tyrosine-protein kinase 99.2 1.7E-11 6E-16 130.3 8.2 108 657-764 21-160 (323)
292 2i1m_A Macrophage colony-stimu 99.2 8E-12 2.7E-16 133.5 5.4 94 655-748 42-143 (333)
293 3poz_A Epidermal growth factor 99.2 2.4E-11 8.1E-16 129.7 9.0 105 659-764 15-140 (327)
294 2vwi_A Serine/threonine-protei 99.2 4E-12 1.4E-16 133.7 2.9 108 657-764 13-144 (303)
295 4f0f_A Serine/threonine-protei 99.2 2.1E-11 7.2E-16 127.2 8.3 105 658-764 18-147 (287)
296 3q4u_A Activin receptor type-1 99.2 2.5E-11 8.7E-16 127.4 9.0 88 658-749 7-100 (301)
297 2vgo_A Serine/threonine-protei 99.2 1.1E-11 3.8E-16 129.2 6.2 106 659-764 14-137 (284)
298 3c4z_A Rhodopsin kinase; Ser/T 99.2 2.6E-11 8.9E-16 137.6 9.5 106 659-764 185-312 (543)
299 2yex_A Serine/threonine-protei 99.2 1.1E-11 3.8E-16 128.4 6.0 106 659-764 7-128 (276)
300 2i6l_A Mitogen-activated prote 99.2 2.2E-11 7.5E-16 129.0 8.2 106 658-764 10-143 (320)
301 1vzo_A Ribosomal protein S6 ki 99.2 1.1E-11 3.6E-16 134.1 5.8 106 659-764 54-182 (355)
302 4fl3_A Tyrosine-protein kinase 99.2 2.3E-11 7.8E-16 141.4 9.0 99 665-764 375-492 (635)
303 2ycf_A Serine/threonine-protei 99.2 1.4E-11 4.8E-16 131.0 6.7 106 658-764 9-137 (322)
304 4aaa_A Cyclin-dependent kinase 99.2 2.7E-11 9.2E-16 129.4 8.9 107 658-764 24-147 (331)
305 3c1x_A Hepatocyte growth facto 99.2 2E-11 6.8E-16 132.8 7.6 104 661-764 91-215 (373)
306 2wei_A Calmodulin-domain prote 99.2 3.2E-11 1.1E-15 126.0 8.9 107 658-764 21-144 (287)
307 3pls_A Macrophage-stimulating 99.2 4.7E-11 1.6E-15 125.1 10.0 104 661-764 23-147 (298)
308 3llt_A Serine/threonine kinase 99.2 3.2E-11 1.1E-15 130.4 8.9 114 649-764 25-160 (360)
309 1t4h_A Serine/threonine-protei 99.2 3.7E-11 1.3E-15 125.6 8.9 104 661-764 28-154 (290)
310 2ifg_A High affinity nerve gro 99.2 7E-11 2.4E-15 127.1 11.2 102 91-195 14-117 (347)
311 3f66_A Hepatocyte growth facto 99.2 4E-11 1.4E-15 125.9 9.0 105 660-764 26-151 (298)
312 1qpc_A LCK kinase; alpha beta 99.2 1.2E-11 4E-16 128.6 4.8 105 658-764 12-132 (279)
313 3com_A Serine/threonine-protei 99.2 3.4E-11 1.2E-15 127.4 8.4 106 657-764 27-148 (314)
314 1xbb_A Tyrosine-protein kinase 99.2 3.4E-11 1.2E-15 126.0 8.0 106 658-764 15-140 (291)
315 2w5a_A Serine/threonine-protei 99.2 2.9E-11 1E-15 125.5 7.2 91 658-748 5-100 (279)
316 3cc6_A Protein tyrosine kinase 99.2 5.5E-11 1.9E-15 123.7 9.2 106 658-764 11-136 (281)
317 3dbq_A Dual specificity protei 99.1 5.1E-11 1.7E-15 128.0 9.1 105 659-764 9-131 (343)
318 3brb_A Proto-oncogene tyrosine 99.1 4.6E-11 1.6E-15 126.4 8.6 108 657-764 32-170 (313)
319 3rp9_A Mitogen-activated prote 99.1 3E-11 1E-15 135.2 7.3 106 658-764 52-179 (458)
320 2izr_A Casein kinase I isoform 99.1 3.5E-11 1.2E-15 128.5 7.2 104 658-764 8-128 (330)
321 3n9x_A Phosphotransferase; mal 99.1 3.9E-11 1.3E-15 133.2 7.8 106 658-764 25-152 (432)
322 2ifg_A High affinity nerve gro 99.1 7.5E-11 2.6E-15 126.8 9.8 101 114-217 13-115 (347)
323 2a19_B Interferon-induced, dou 99.1 5.4E-11 1.9E-15 123.7 8.4 102 659-764 11-145 (284)
324 3nsz_A CK II alpha, casein kin 99.1 4.9E-11 1.7E-15 127.1 8.2 103 659-764 36-153 (330)
325 1ua2_A CAK, cell division prot 99.1 4.6E-11 1.6E-15 128.5 7.9 107 657-764 8-135 (346)
326 3dls_A PAS domain-containing s 99.1 1.3E-11 4.4E-16 132.2 3.6 107 658-764 23-153 (335)
327 1byg_A CSK, protein (C-termina 99.1 2.6E-11 8.8E-16 126.0 5.3 104 658-764 20-140 (278)
328 3oz6_A Mitogen-activated prote 99.1 6.2E-11 2.1E-15 129.6 8.5 107 657-764 7-132 (388)
329 2pml_X PFPK7, Ser/Thr protein 99.1 1.8E-11 6.2E-16 131.5 4.1 87 658-745 30-133 (348)
330 3mdy_A Bone morphogenetic prot 99.1 8E-11 2.7E-15 125.8 9.1 90 656-749 34-129 (337)
331 1b6c_B TGF-B superfamily recep 99.1 1.1E-10 3.8E-15 124.9 10.2 91 655-749 38-134 (342)
332 2zmd_A Dual specificity protei 99.1 8E-11 2.7E-15 128.8 8.8 105 659-764 56-178 (390)
333 3mtl_A Cell division protein k 99.1 2E-11 6.8E-16 130.1 3.9 105 659-764 2-123 (324)
334 3eb0_A Putative uncharacterize 99.1 3E-11 1E-15 131.9 5.3 105 655-764 3-164 (383)
335 3kex_A Receptor tyrosine-prote 99.1 2.5E-11 8.6E-16 129.3 4.5 105 659-764 13-138 (325)
336 3og7_A AKAP9-BRAF fusion prote 99.1 7.8E-11 2.7E-15 123.2 7.9 104 658-764 23-143 (289)
337 3lb7_A RAF proto-oncogene seri 99.1 6.7E-11 2.3E-15 125.0 7.4 104 658-764 35-155 (307)
338 2pzi_A Probable serine/threoni 99.1 4.2E-11 1.4E-15 140.8 6.4 107 658-764 79-205 (681)
339 3un9_A NLR family member X1; l 99.1 4.2E-12 1.4E-16 137.8 -2.0 135 108-242 71-224 (372)
340 1cm8_A Phosphorylated MAP kina 99.1 4.1E-11 1.4E-15 130.0 5.8 106 658-764 24-151 (367)
341 2r3i_A Cell division protein k 99.1 1.6E-10 5.6E-15 121.1 10.2 105 659-764 3-126 (299)
342 2x7f_A TRAF2 and NCK-interacti 99.1 5.8E-11 2E-15 126.3 6.6 111 653-764 18-152 (326)
343 3ttj_A Mitogen-activated prote 99.1 5E-11 1.7E-15 133.5 6.3 106 658-764 61-187 (464)
344 3lzb_A Epidermal growth factor 99.1 1.2E-10 4.2E-15 124.1 8.7 106 658-764 14-140 (327)
345 2xrw_A Mitogen-activated prote 99.1 1.3E-10 4.4E-15 126.3 8.7 106 658-764 24-150 (371)
346 3lm5_A Serine/threonine-protei 99.1 8.9E-11 3E-15 125.2 7.3 115 650-764 19-154 (327)
347 2vuw_A Serine/threonine-protei 99.1 4.5E-11 1.5E-15 128.0 4.9 105 659-764 20-185 (336)
348 2j0j_A Focal adhesion kinase 1 99.1 1.7E-10 5.7E-15 134.7 10.1 106 658-764 389-514 (656)
349 2b9h_A MAP kinase FUS3, mitoge 99.1 1E-10 3.5E-15 125.9 7.7 106 658-764 10-135 (353)
350 3un9_A NLR family member X1; l 99.1 1.2E-12 4E-17 142.1 -7.8 167 85-251 72-261 (372)
351 3mi9_A Cell division protein k 99.1 1.6E-10 5.6E-15 124.3 9.0 105 659-764 17-147 (351)
352 1u46_A ACK-1, activated CDC42 99.1 6.7E-11 2.3E-15 123.5 5.4 105 659-764 18-144 (291)
353 3pfq_A PKC-B, PKC-beta, protei 99.1 6.6E-11 2.3E-15 138.5 5.4 108 657-764 339-465 (674)
354 1nxk_A MAP kinase-activated pr 99.1 3E-10 1E-14 124.7 9.9 101 659-764 61-184 (400)
355 2iwi_A Serine/threonine-protei 99.1 4.5E-11 1.6E-15 126.4 3.2 108 657-764 29-162 (312)
356 3qyz_A Mitogen-activated prote 99.0 1.7E-10 5.8E-15 125.0 7.6 106 658-764 26-151 (364)
357 2rio_A Serine/threonine-protei 99.0 2.5E-10 8.5E-15 126.8 9.1 101 660-764 16-138 (434)
358 3m2w_A MAP kinase-activated pr 99.0 4.7E-10 1.6E-14 117.8 10.8 101 659-764 17-140 (299)
359 3ll6_A Cyclin G-associated kin 99.0 6.5E-11 2.2E-15 126.3 4.1 105 659-764 28-161 (337)
360 2wtk_C Serine/threonine-protei 99.0 2.5E-10 8.6E-15 120.1 8.6 106 658-764 4-132 (305)
361 1csn_A Casein kinase-1; phosph 99.0 2.5E-10 8.6E-15 119.5 8.4 104 658-764 9-129 (298)
362 3byv_A Rhoptry kinase; malaria 99.0 2.8E-11 9.6E-16 131.8 1.1 106 658-764 72-229 (377)
363 3qa8_A MGC80376 protein; kinas 99.0 2.6E-11 8.9E-16 139.7 0.8 106 659-764 14-144 (676)
364 3cek_A Dual specificity protei 99.0 2.6E-10 8.9E-15 120.6 8.1 106 658-764 27-150 (313)
365 4exu_A Mitogen-activated prote 99.0 1.7E-10 5.9E-15 125.3 6.7 106 658-764 41-167 (371)
366 2fst_X Mitogen-activated prote 99.0 1E-10 3.4E-15 126.9 4.7 106 658-764 28-155 (367)
367 3p23_A Serine/threonine-protei 99.0 2.7E-10 9.2E-15 126.3 8.2 102 659-764 24-141 (432)
368 3op5_A Serine/threonine-protei 99.0 2E-10 6.9E-15 124.4 6.9 106 658-764 34-175 (364)
369 3fme_A Dual specificity mitoge 99.0 1.5E-10 5E-15 120.8 5.5 106 658-764 6-133 (290)
370 2y4i_B KSR2, HKSR2, kinase sup 99.0 6.4E-11 2.2E-15 125.5 2.7 106 657-764 31-153 (319)
371 3g2f_A Bone morphogenetic prot 99.0 4.1E-10 1.4E-14 120.3 8.9 103 658-764 12-143 (336)
372 3g33_A Cell division protein k 99.0 6.9E-10 2.4E-14 117.0 10.2 107 657-764 7-143 (308)
373 3en9_A Glycoprotease, O-sialog 99.0 4E-10 1.4E-14 128.3 8.4 102 662-764 339-454 (540)
374 2v62_A Serine/threonine-protei 99.0 1.4E-10 4.9E-15 124.5 4.4 105 659-764 37-174 (345)
375 3rgf_A Cyclin-dependent kinase 99.0 3E-10 1E-14 124.9 6.9 101 661-764 22-151 (405)
376 3coi_A Mitogen-activated prote 99.0 1.9E-10 6.4E-15 124.0 5.1 106 658-764 23-149 (353)
377 3an0_A Dual specificity mitoge 99.0 7.5E-10 2.6E-14 118.5 9.6 90 658-748 50-142 (340)
378 3aln_A Dual specificity mitoge 99.0 1.1E-09 3.9E-14 116.4 9.6 89 658-747 21-112 (327)
379 3e3p_A Protein kinase, putativ 99.0 5.2E-10 1.8E-14 120.7 6.8 110 653-764 17-154 (360)
380 1blx_A Cyclin-dependent kinase 98.9 1E-09 3.4E-14 116.6 8.7 107 657-764 9-143 (326)
381 2jii_A Serine/threonine-protei 98.9 3.6E-10 1.2E-14 121.8 5.2 100 659-764 42-182 (352)
382 1j1b_A Glycogen synthase kinas 98.9 3.3E-10 1.1E-14 125.2 4.5 100 660-764 55-179 (420)
383 3fhr_A MAP kinase-activated pr 98.9 2.1E-09 7.1E-14 115.0 10.6 102 658-764 27-151 (336)
384 3uzp_A CKI-delta, CKID, casein 98.9 1.3E-09 4.5E-14 113.9 8.6 104 658-764 8-128 (296)
385 3kvw_A DYRK2, dual specificity 98.9 3.7E-09 1.3E-13 117.1 11.5 105 658-764 96-223 (429)
386 4hgt_A Casein kinase I isoform 98.9 1.5E-09 5E-14 113.5 7.4 105 657-764 7-128 (296)
387 4e7w_A Glycogen synthase kinas 98.9 5.9E-10 2E-14 122.0 4.5 102 659-764 40-164 (394)
388 1wak_A Serine/threonine-protei 98.9 1.8E-09 6.1E-14 117.9 7.8 105 658-764 36-170 (397)
389 1zar_A RIO2 kinase; serine kin 98.9 9.2E-10 3.1E-14 114.6 5.1 105 655-764 86-216 (282)
390 3a99_A Proto-oncogene serine/t 98.9 4.4E-10 1.5E-14 119.3 2.6 108 657-764 41-172 (320)
391 1z57_A Dual specificity protei 98.9 4E-09 1.4E-13 112.3 9.9 105 658-764 13-141 (339)
392 3q60_A ROP5B; pseudokinase, tr 98.9 8.7E-10 3E-14 119.6 4.6 104 659-764 62-217 (371)
393 3sv0_A Casein kinase I-like; t 98.8 5.4E-09 1.9E-13 117.2 9.8 104 658-764 6-126 (483)
394 1q8y_A SR protein kinase; tran 98.8 5.6E-09 1.9E-13 113.0 7.9 104 659-764 19-155 (373)
395 2ra8_A Uncharacterized protein 98.8 1.4E-09 4.8E-14 117.0 3.0 84 275-358 250-341 (362)
396 2vx3_A Dual specificity tyrosi 98.8 1E-08 3.6E-13 111.6 9.9 99 656-756 51-156 (382)
397 4azs_A Methyltransferase WBDD; 98.8 2.9E-09 9.8E-14 122.0 5.1 99 666-764 241-362 (569)
398 2dyl_A Dual specificity mitoge 98.8 7.4E-09 2.5E-13 109.4 7.7 106 658-764 24-148 (318)
399 4fs7_A Uncharacterized protein 98.8 1.8E-07 6.1E-12 102.2 18.4 236 86-333 72-328 (394)
400 2eu9_A Dual specificity protei 98.7 1.8E-08 6E-13 108.1 9.2 105 658-764 18-146 (355)
401 2ra8_A Uncharacterized protein 98.7 4.1E-09 1.4E-13 113.3 3.0 102 85-189 107-227 (362)
402 4fs7_A Uncharacterized protein 98.6 5.2E-07 1.8E-11 98.5 16.9 198 127-335 156-353 (394)
403 4gt6_A Cell surface protein; l 98.6 1.4E-06 4.8E-11 95.1 19.1 261 87-358 66-368 (394)
404 4gt6_A Cell surface protein; l 98.5 4.6E-06 1.6E-10 90.9 19.3 259 102-370 56-359 (394)
405 1zth_A RIO1 serine protein kin 98.4 1.2E-07 3.9E-12 97.3 3.2 100 661-764 49-194 (258)
406 3rw6_A Nuclear RNA export fact 98.3 4.6E-08 1.6E-12 100.0 -2.8 89 129-219 137-234 (267)
407 1io0_A Tropomodulin; LRR prote 98.2 1.5E-07 5.2E-12 91.1 0.6 94 101-194 28-136 (185)
408 3rw6_A Nuclear RNA export fact 98.2 7.8E-08 2.7E-12 98.2 -1.6 80 130-211 167-257 (267)
409 4h09_A Hypothetical leucine ri 98.2 3.2E-05 1.1E-09 83.7 18.4 239 86-335 47-320 (379)
410 3dzo_A Rhoptry kinase domain; 98.2 4.8E-07 1.6E-11 99.4 3.1 106 658-764 77-234 (413)
411 1io0_A Tropomodulin; LRR prote 98.2 1.7E-07 5.9E-12 90.8 -0.7 117 125-241 28-163 (185)
412 4gyi_A RIO2 kinase; protein ki 98.2 1.8E-07 6E-12 100.5 -1.3 102 661-764 97-228 (397)
413 4h09_A Hypothetical leucine ri 97.6 0.0013 4.4E-08 70.9 16.9 231 86-325 114-356 (379)
414 3e4g_A ATP synthase subunit S, 97.5 2.3E-05 7.9E-10 74.2 1.8 34 110-143 62-95 (176)
415 3e4g_A ATP synthase subunit S, 97.4 6.6E-05 2.3E-09 71.1 3.4 35 133-167 61-95 (176)
416 3tm0_A Aminoglycoside 3'-phosp 97.2 0.00074 2.5E-08 68.6 9.1 89 656-745 11-100 (263)
417 3d1u_A Putative fructosamine-3 97.2 0.00057 2E-08 70.7 7.6 77 662-742 18-97 (288)
418 1nd4_A Aminoglycoside 3'-phosp 96.6 0.0013 4.4E-08 66.4 4.5 81 660-743 21-103 (264)
419 1pgv_A TMD-1, tropomodulin TMD 96.2 0.0013 4.6E-08 63.3 1.5 87 105-191 37-136 (197)
420 1pgv_A TMD-1, tropomodulin TMD 96.0 0.0017 5.9E-08 62.5 1.2 87 128-214 36-135 (197)
421 3rfe_A Platelet glycoprotein I 95.9 0.011 3.6E-07 53.1 6.0 57 281-339 12-69 (130)
422 3rfe_A Platelet glycoprotein I 95.3 0.031 1.1E-06 50.0 6.8 34 159-192 33-66 (130)
423 3f7w_A Putative fructosamine-3 93.6 0.13 4.5E-06 52.6 7.7 78 661-742 17-97 (288)
424 3dxp_A Putative acyl-COA dehyd 92.9 0.063 2.2E-06 56.9 4.1 78 664-742 43-128 (359)
425 4gkh_A Aminoglycoside 3'-phosp 90.8 0.69 2.4E-05 46.4 9.0 78 666-746 31-111 (272)
426 3jr1_A Putative fructosamine-3 90.2 0.48 1.6E-05 49.1 7.2 76 663-742 40-118 (312)
427 2jwp_A Malectin, MGC80075; sug 88.7 0.91 3.1E-05 42.5 7.3 82 469-558 54-135 (174)
428 2olc_A MTR kinase, methylthior 88.7 0.43 1.5E-05 51.2 5.8 76 664-741 35-121 (397)
429 3r70_A Aminoglycoside phosphot 86.1 1.2 4E-05 46.2 7.1 73 661-743 39-115 (320)
430 3ovc_A Hygromycin-B 4-O-kinase 84.2 2.7 9.1E-05 44.4 8.9 74 663-742 45-121 (362)
431 3cxl_A N-chimerin; SH2, RHO-GA 83.7 0.15 5.3E-06 56.1 -1.2 60 664-726 147-215 (463)
432 3tdw_A Gentamicin resistance p 82.3 2.3 7.7E-05 43.7 7.2 75 664-744 24-102 (306)
433 3ats_A Putative uncharacterize 77.4 0.82 2.8E-05 48.1 1.9 80 664-743 25-121 (357)
434 2ks1_B Epidermal growth factor 75.7 3.6 0.00012 28.6 4.1 13 604-616 13-25 (44)
435 2k1k_A Ephrin type-A receptor 75.2 3 0.0001 28.0 3.5 18 599-616 7-24 (38)
436 2l2t_A Receptor tyrosine-prote 71.7 3.9 0.00013 28.4 3.4 12 605-616 13-24 (44)
437 3sg8_A APH(2'')-ID; antibiotic 67.7 3.3 0.00011 42.2 3.7 75 664-744 25-105 (304)
438 2q83_A YTAA protein; 2635576, 64.2 10 0.00035 38.9 6.7 73 665-742 38-118 (346)
439 2jwa_A Receptor tyrosine-prote 60.1 12 0.00041 25.9 4.0 8 605-612 14-21 (44)
440 1zyl_A Hypothetical protein YI 57.7 17 0.00057 37.2 6.9 74 666-741 33-113 (328)
441 2ppq_A HSK, HK, homoserine kin 47.4 27 0.00092 35.4 6.5 90 649-741 7-109 (322)
442 1nw1_A Choline kinase (49.2 KD 43.6 18 0.00062 38.9 4.6 73 664-742 78-159 (429)
443 2pyw_A Uncharacterized protein 42.7 28 0.00096 37.1 5.9 73 664-739 39-122 (420)
444 3csv_A Aminoglycoside phosphot 36.0 82 0.0028 31.9 8.1 79 665-748 24-105 (333)
445 2ks1_B Epidermal growth factor 35.8 46 0.0016 23.0 3.9 16 600-616 13-28 (44)
446 2l8s_A Integrin alpha-1; trans 33.2 48 0.0017 24.0 3.8 26 602-627 9-34 (54)
447 2knc_A Integrin alpha-IIB; tra 30.1 53 0.0018 23.8 3.6 25 602-626 12-36 (54)
448 2k9y_A Ephrin type-A receptor 28.7 33 0.0011 23.1 2.3 8 606-613 17-24 (41)
449 3feg_A Choline/ethanolamine ki 24.8 58 0.002 34.2 4.5 73 665-742 56-137 (379)
450 2k1a_A Integrin alpha-IIB; sin 23.4 1E+02 0.0034 21.1 3.8 26 602-627 10-35 (42)
451 2l34_A TYRO protein tyrosine k 22.8 66 0.0023 20.7 2.7 16 602-617 6-21 (33)
452 3c5i_A Choline kinase; choline 20.7 65 0.0022 33.4 3.9 72 665-741 39-120 (369)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=3.7e-42 Score=411.89 Aligned_cols=266 Identities=26% Similarity=0.342 Sum_probs=179.3
Q ss_pred CChhHHHHHHHHHHhcCC----CCCCCCCCCCCCCCCcccccCCCCCceeccCCCCCCceeeEEEEEcCCCccccc---C
Q 004275 29 LPDDEVQTLQSIFRKLNF----RNGQVNQTSCTEGSWNVTIDDSNGSNFTCDCTYSNNTVCHVTVILLKGFNLAGV---I 101 (764)
Q Consensus 29 ~~~~e~~aL~~~~~~~~~----~~w~~~~~~C~~~~~~~~~~~~~~~gv~C~~~~~~~~~~~v~~L~L~~~~l~g~---~ 101 (764)
..++|++||++||+++.+ ++|..+++||. |.||+|+ .++|+.|+|+++++.|. +
T Consensus 9 ~~~~~~~all~~k~~~~~~~~l~~W~~~~~~C~------------w~gv~C~-------~~~v~~L~L~~~~l~g~~~~l 69 (768)
T 3rgz_A 9 SLYREIHQLISFKDVLPDKNLLPDWSSNKNPCT------------FDGVTCR-------DDKVTSIDLSSKPLNVGFSAV 69 (768)
T ss_dssp CHHHHHHHHHHHHTTCSCTTSSTTCCTTSCGGG------------STTEEEE-------TTEEEEEECTTSCCCEEHHHH
T ss_pred CCHHHHHHHHHHHhhCCCcccccCCCCCCCCcC------------CcceEEC-------CCcEEEEECCCCCcCCccCcc
Confidence 356799999999999864 57987778886 9999996 14799999998888775 3
Q ss_pred C-----------------------ccCCCCCCCCEEEccCCcCCccCch--hhhcCCCCcEEecccCcCcccCCcCc-CC
Q 004275 102 P-----------------------EEFGNLTFLQEVDLSRNYFNGSLPK--SFARLQNLTKLLILGNRLSGSIPLEI-GD 155 (764)
Q Consensus 102 p-----------------------~~l~~L~~L~~L~Ls~N~l~~~~p~--~~~~l~~L~~L~Ls~n~l~~~~p~~~-~~ 155 (764)
| ..|+.+++|++|||++|.++|.+|. .++++++|++|+|++|.+.+.+|..+ .+
T Consensus 70 ~~~l~~L~~L~~l~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~ 149 (768)
T 3rgz_A 70 SSSLLSLTGLESLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLK 149 (768)
T ss_dssp HHHTTTCTTCCEEECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCC
T ss_pred ChhHhccCcccccCCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhcc
Confidence 2 5678888899999999998888887 88888888888888887776666543 23
Q ss_pred -------------------------------------------------CCCCCEEEeeCCcCCCCCCccCCCCCCCcEE
Q 004275 156 -------------------------------------------------ISTLEELVLEDNQLVGPLPENLGNLKSLRRI 186 (764)
Q Consensus 156 -------------------------------------------------l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L 186 (764)
+++|++|+|++|++++.+|. ++++++|++|
T Consensus 150 l~~L~~L~Ls~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L 228 (768)
T 3rgz_A 150 LNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHL 228 (768)
T ss_dssp CTTCSEEECCSSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBCTTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEE
T ss_pred CCCCCEEECCCCccCCcCChhhhhhccCCCCCEEECCCCcccccCCcccCCcCCEEECcCCcCCCCCcc-cccCCCCCEE
Confidence 33444444444444444444 6666777777
Q ss_pred EccCccCCCCCcccccCCCCCcEEEccCccCC----------------------CcCcccccCC-CCCCEEeeeCCcCCC
Q 004275 187 LLSSNNFTGSIPESYGNLKNLTEFRIDGSNLT----------------------GRIPNFIGNW-TKLDRLDLQGTSLEG 243 (764)
Q Consensus 187 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~----------------------~~~p~~~~~l-~~L~~L~L~~N~l~~ 243 (764)
++++|++++.+|..+.++++|++|++++|.++ +.+|..+... ++|++|++++|.+++
T Consensus 229 ~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~ 308 (768)
T 3rgz_A 229 DISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYG 308 (768)
T ss_dssp ECCSSCCCSCHHHHTTTCSSCCEEECCSSCCEESCCCCCCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEE
T ss_pred ECcCCcCCCcccHHHhcCCCCCEEECCCCcccCccCccccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCC
Confidence 77777776666666666666555555555443 3555555554 788888888888888
Q ss_pred CCccchhcCCCCCEEEcCCCCCCCCCCCC--ccCCccccccccccccccccCCccccCCC-CCCEEeccCCCCCC
Q 004275 244 PIPSTISQLKNLTELRISDLKGSSSSFPN--LQDMKKMERLILRNCLITGRIPEYIEDMT-DLKILDLSFNQLTG 315 (764)
Q Consensus 244 ~~p~~l~~l~~L~~L~L~~n~~~~~~~~~--l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~g 315 (764)
.+|..++++++|++|++++|+.. +.+|. +..+++|++|++++|++++.+|..+..++ +|++|++++|++++
T Consensus 309 ~~p~~~~~l~~L~~L~L~~n~l~-~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~ 382 (768)
T 3rgz_A 309 AVPPFFGSCSLLESLALSSNNFS-GELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSG 382 (768)
T ss_dssp CCCGGGGGCTTCCEEECCSSEEE-EECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEE
T ss_pred ccchHHhcCCCccEEECCCCccc-CcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCC
Confidence 88888888888888888875543 22221 45555555555555555555554444333 34444444443333
No 2
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=3.8e-40 Score=385.86 Aligned_cols=340 Identities=19% Similarity=0.285 Sum_probs=289.3
Q ss_pred hHHHHHHHHHHhcCCCCCCCCCCCCC-CCCCcccccCCCC---CceeccCCCCCCceeeEEEEEcCCCcccccCCccCCC
Q 004275 32 DEVQTLQSIFRKLNFRNGQVNQTSCT-EGSWNVTIDDSNG---SNFTCDCTYSNNTVCHVTVILLKGFNLAGVIPEEFGN 107 (764)
Q Consensus 32 ~e~~aL~~~~~~~~~~~w~~~~~~C~-~~~~~~~~~~~~~---~gv~C~~~~~~~~~~~v~~L~L~~~~l~g~~p~~l~~ 107 (764)
.|++||.+++++++...|....+.|. ...|....+.+.| .||+|+.. +||+.|+|+++++.|.+|+++++
T Consensus 30 ~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~~~~c~w~~~~GV~C~~~------~~V~~L~L~~~~l~g~lp~~l~~ 103 (636)
T 4eco_A 30 KDYLALKEIWDALNGKNWSQQGFGTQPGANWNFNKELDMWGAQPGVSLNSN------GRVTGLSLEGFGASGRVPDAIGQ 103 (636)
T ss_dssp HHHHHHHHHHHHTTGGGCCCCC------CCCCCSSCGGGTTCCTTEEECTT------CCEEEEECTTSCCEEEECGGGGG
T ss_pred HHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCCCCcccccCCCCeEEcCC------CCEEEEEecCcccCCcCChHHhc
Confidence 58999999999998877865433332 2346555555668 99999731 68999999999999999999999
Q ss_pred CCCCCEEEccCCc-------------------------------------------------------------------
Q 004275 108 LTFLQEVDLSRNY------------------------------------------------------------------- 120 (764)
Q Consensus 108 L~~L~~L~Ls~N~------------------------------------------------------------------- 120 (764)
|++|++|||++|.
T Consensus 104 L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~l 183 (636)
T 4eco_A 104 LTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITL 183 (636)
T ss_dssp CTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCCC
T ss_pred CccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCccccccccccccch
Confidence 9999999999884
Q ss_pred -----------CCccCchhhhcCCCCcEEecccCcCccc-----------------CCcCcC--CCCCCCEEEeeCCcCC
Q 004275 121 -----------FNGSLPKSFARLQNLTKLLILGNRLSGS-----------------IPLEIG--DISTLEELVLEDNQLV 170 (764)
Q Consensus 121 -----------l~~~~p~~~~~l~~L~~L~Ls~n~l~~~-----------------~p~~~~--~l~~L~~L~Ls~N~l~ 170 (764)
+++ +|..|+++++|++|+|++|.+++. +|..++ ++++|++|+|++|++.
T Consensus 184 ~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~ 262 (636)
T 4eco_A 184 KDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNL 262 (636)
T ss_dssp CTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTC
T ss_pred hhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCC
Confidence 345 889999999999999999999986 999999 9999999999999999
Q ss_pred CCCCccCCCCCCCcEEEccCcc-CCC-CCcccccCC------CCCcEEEccCccCCCcCcc--cccCCCCCCEEeeeCCc
Q 004275 171 GPLPENLGNLKSLRRILLSSNN-FTG-SIPESYGNL------KNLTEFRIDGSNLTGRIPN--FIGNWTKLDRLDLQGTS 240 (764)
Q Consensus 171 ~~~p~~l~~l~~L~~L~Ls~N~-l~~-~~p~~~~~l------~~L~~L~L~~n~l~~~~p~--~~~~l~~L~~L~L~~N~ 240 (764)
+.+|..++++++|++|++++|+ +++ .+|..++.+ ++|++|++++|+++ .+|. .++++++|++|++++|+
T Consensus 263 ~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~ 341 (636)
T 4eco_A 263 TKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQ 341 (636)
T ss_dssp SSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCC
T ss_pred ccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCc
Confidence 9999999999999999999998 998 899988887 99999999999999 8898 89999999999999999
Q ss_pred CCCCCccchhcCCCCCEEEcCCCCCCCCCCC-CccCCcc-ccccccccccccccCCccccCCC--CCCEEeccCCCCCCC
Q 004275 241 LEGPIPSTISQLKNLTELRISDLKGSSSSFP-NLQDMKK-MERLILRNCLITGRIPEYIEDMT--DLKILDLSFNQLTGP 316 (764)
Q Consensus 241 l~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~-~l~~l~~-L~~L~Ls~N~l~~~~p~~~~~l~--~L~~L~Ls~N~l~g~ 316 (764)
++|.+| .++.+++|+.|++++|.+. .+| .+..+++ |++|++++|.++ .+|..+..++ +|++|++++|++++.
T Consensus 342 l~g~ip-~~~~l~~L~~L~L~~N~l~--~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~ 417 (636)
T 4eco_A 342 LEGKLP-AFGSEIKLASLNLAYNQIT--EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSV 417 (636)
T ss_dssp CEEECC-CCEEEEEESEEECCSSEEE--ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTT
T ss_pred Cccchh-hhCCCCCCCEEECCCCccc--cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCc
Confidence 999999 8999999999999997766 444 4888898 999999999999 7888887655 899999999999999
Q ss_pred cccccc-------CCCCCCEEeccCCcCcCCCChhh---hcCCCeEEeecCcCCCCCCcccc----------cc-cceee
Q 004275 317 VPGILQ-------NLKKIDYIFLTNNSLSGTLPDWI---LTSEKNLDLSYNNFTESSPATCR----------ES-RVNIL 375 (764)
Q Consensus 317 ~p~~~~-------~l~~L~~L~L~~N~l~g~~p~~~---~~~l~~L~Ls~N~l~~~~p~~~~----------~~-~l~~~ 375 (764)
+|..+. .+++|++|++++|+++ .+|..+ .+.++.|+|++|+++..++..+. .+ .+++.
T Consensus 418 ~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~~~~~~~~l~~L~~L~Ls 496 (636)
T 4eco_A 418 DGKNFDPLDPTPFKGINVSSINLSNNQIS-KFPKELFSTGSPLSSINLMGNMLTEIPKNSLKDENENFKNTYLLTSIDLR 496 (636)
T ss_dssp TTCSSCTTCSSCCCCCCEEEEECCSSCCC-SCCTHHHHTTCCCSEEECCSSCCSBCCSSSSEETTEECTTGGGCCEEECC
T ss_pred chhhhcccccccccCCCCCEEECcCCccC-cCCHHHHccCCCCCEEECCCCCCCCcCHHHhccccccccccCCccEEECc
Confidence 999888 8889999999999999 566654 46788999999999955554433 33 45666
Q ss_pred ccccCCCCCc
Q 004275 376 SSFSSTGSNS 385 (764)
Q Consensus 376 ~~~~~~~~~~ 385 (764)
.|... .+|.
T Consensus 497 ~N~l~-~lp~ 505 (636)
T 4eco_A 497 FNKLT-KLSD 505 (636)
T ss_dssp SSCCC-BCCG
T ss_pred CCcCC-ccCh
Confidence 66444 4443
No 3
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=3.3e-40 Score=352.47 Aligned_cols=301 Identities=27% Similarity=0.400 Sum_probs=242.7
Q ss_pred CCChhHHHHHHHHHHhcCC----CCCCCCCCCCCCCCCcccccCCCCCceeccCCCCCCceeeEEEEEcCCCcccc--cC
Q 004275 28 RLPDDEVQTLQSIFRKLNF----RNGQVNQTSCTEGSWNVTIDDSNGSNFTCDCTYSNNTVCHVTVILLKGFNLAG--VI 101 (764)
Q Consensus 28 ~~~~~e~~aL~~~~~~~~~----~~w~~~~~~C~~~~~~~~~~~~~~~gv~C~~~~~~~~~~~v~~L~L~~~~l~g--~~ 101 (764)
.|.++|++||++||+++++ .+|..+.++|... |.||+|+.. ....+|+.|+|+++++.+ .+
T Consensus 2 ~c~~~~~~aL~~~k~~~~~~~~l~~W~~~~~~C~~~----------w~gv~C~~~---~~~~~l~~L~L~~~~l~~~~~~ 68 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLGNPTTLSSWLPTTDCCNRT----------WLGVLCDTD---TQTYRVNNLDLSGLNLPKPYPI 68 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTCCGGGTTCCTTSCTTTTC----------STTEEECCS---SSCCCEEEEEEECCCCSSCEEC
T ss_pred CCCHHHHHHHHHHHHhcCCcccccCCCCCCCCCcCC----------CcceEeCCC---CCCceEEEEECCCCCccCCccc
Confidence 3788999999999999975 5787777888632 899999642 122589999999999999 89
Q ss_pred CccCCCCCCCCEEEccC-CcCCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEeeCCcCCCCCCccCCCC
Q 004275 102 PEEFGNLTFLQEVDLSR-NYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVLEDNQLVGPLPENLGNL 180 (764)
Q Consensus 102 p~~l~~L~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l 180 (764)
|..|.++++|++|+|++ |.+.+.+|..|+++++|++|+|++|.+++.+|..|+++++|++|+|++|.+++.+|..+.++
T Consensus 69 ~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 148 (313)
T 1ogq_A 69 PSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSL 148 (313)
T ss_dssp CGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGC
T ss_pred ChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcC
Confidence 99999999999999995 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcEEEccCccCCCCCcccccCCC-CCcEEEccCccCCCcCcccccCCCCCCEEeeeCCcCCCCCccchhcCCCCCEEE
Q 004275 181 KSLRRILLSSNNFTGSIPESYGNLK-NLTEFRIDGSNLTGRIPNFIGNWTKLDRLDLQGTSLEGPIPSTISQLKNLTELR 259 (764)
Q Consensus 181 ~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ 259 (764)
++|++|+|++|++++.+|..+..++ +|++|++++|.+++.+|..+..++ |+.|++++|.+++.+|..+..+++|+.|+
T Consensus 149 ~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 227 (313)
T 1ogq_A 149 PNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIH 227 (313)
T ss_dssp TTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEE
T ss_pred CCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEE
Confidence 9999999999999999999999998 999999999999999999999887 99999999999988888887777777777
Q ss_pred cCCCCCCCCCCCCccCCccccccccccccccccCCccccCCCCCCEEeccCCCCCCCccccccCCCCCCEEeccCCcCcC
Q 004275 260 ISDLKGSSSSFPNLQDMKKMERLILRNCLITGRIPEYIEDMTDLKILDLSFNQLTGPVPGILQNLKKIDYIFLTNNSLSG 339 (764)
Q Consensus 260 L~~n~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g 339 (764)
+++|. +++.+|. +..+++|++|++++|++++.+|..+..+++|++|++++|+++|
T Consensus 228 L~~N~------------------------l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 282 (313)
T 1ogq_A 228 LAKNS------------------------LAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCG 282 (313)
T ss_dssp CCSSE------------------------ECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEE
T ss_pred CCCCc------------------------eeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccc
Confidence 66643 3333333 4455566666666666665666666666666666666666666
Q ss_pred CCChhh-hcCCCeEEeecCc-CCCCCCccc
Q 004275 340 TLPDWI-LTSEKNLDLSYNN-FTESSPATC 367 (764)
Q Consensus 340 ~~p~~~-~~~l~~L~Ls~N~-l~~~~p~~~ 367 (764)
.+|..- ++.++.+++++|+ +.|.+...|
T Consensus 283 ~ip~~~~l~~L~~l~l~~N~~lc~~p~~~C 312 (313)
T 1ogq_A 283 EIPQGGNLQRFDVSAYANNKCLCGSPLPAC 312 (313)
T ss_dssp ECCCSTTGGGSCGGGTCSSSEEESTTSSCC
T ss_pred cCCCCccccccChHHhcCCCCccCCCCCCC
Confidence 665532 3445566666665 555443334
No 4
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=7.1e-39 Score=382.19 Aligned_cols=323 Identities=19% Similarity=0.269 Sum_probs=269.6
Q ss_pred CChhHHHHHHHHHHhcCCCCCCCCC-----CC--CCCCCCcccccCCCC---CceeccCCCCCCceeeEEEEEcCCCccc
Q 004275 29 LPDDEVQTLQSIFRKLNFRNGQVNQ-----TS--CTEGSWNVTIDDSNG---SNFTCDCTYSNNTVCHVTVILLKGFNLA 98 (764)
Q Consensus 29 ~~~~e~~aL~~~~~~~~~~~w~~~~-----~~--C~~~~~~~~~~~~~~---~gv~C~~~~~~~~~~~v~~L~L~~~~l~ 98 (764)
...+|++||++||+++++++|..+. ++ |. |+...+...| .||+|++ .++|+.|+|+++++.
T Consensus 266 ~~~~d~~ALl~~k~~l~~~~W~~~~~~~~~~~~~C~---W~~~~~~~~w~~~~GV~C~~------~~~V~~L~Ls~~~L~ 336 (876)
T 4ecn_A 266 EYIKDYKALKAIWEALDGKNWRYYSGTINNTIHSLN---WNFNKELDMWGDQPGVDLDN------NGRVTGLSLAGFGAK 336 (876)
T ss_dssp HHHHHHHHHHHHHHHTTGGGCCCCCSSCSSCCCCCS---CCCSSCGGGTTCCTTEEECT------TSCEEEEECTTTCCE
T ss_pred cchHHHHHHHHHHHHcCCCCCCcCCCcccccCCccc---cccccccccccCcCceEecC------CCCEEEEECccCCCC
Confidence 3457999999999999888997654 56 75 3222222235 9999974 258999999999999
Q ss_pred ccCCccCCCCCCCCEEEc-cCCcCCcc-----------------------------------------------------
Q 004275 99 GVIPEEFGNLTFLQEVDL-SRNYFNGS----------------------------------------------------- 124 (764)
Q Consensus 99 g~~p~~l~~L~~L~~L~L-s~N~l~~~----------------------------------------------------- 124 (764)
|.+|++|++|++|++||| ++|.+.|.
T Consensus 337 G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~ 416 (876)
T 4ecn_A 337 GRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKP 416 (876)
T ss_dssp EEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCC
T ss_pred CcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCccccc
Confidence 999999999999999999 77765443
Q ss_pred -----------------------CchhhhcCCCCcEEecccCcCcc-----------------cCCcCcC--CCCCCCEE
Q 004275 125 -----------------------LPKSFARLQNLTKLLILGNRLSG-----------------SIPLEIG--DISTLEEL 162 (764)
Q Consensus 125 -----------------------~p~~~~~l~~L~~L~Ls~n~l~~-----------------~~p~~~~--~l~~L~~L 162 (764)
+|..|+++++|++|+|++|.+++ .+|..++ ++++|++|
T Consensus 417 i~~~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L 496 (876)
T 4ecn_A 417 IKKDSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDV 496 (876)
T ss_dssp CCCCCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEE
T ss_pred cccccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEE
Confidence 78889999999999999999998 3899988 99999999
Q ss_pred EeeCCcCCCCCCccCCCCCCCcEEEccCcc-CCC-CCcccccCCC-------CCcEEEccCccCCCcCcc--cccCCCCC
Q 004275 163 VLEDNQLVGPLPENLGNLKSLRRILLSSNN-FTG-SIPESYGNLK-------NLTEFRIDGSNLTGRIPN--FIGNWTKL 231 (764)
Q Consensus 163 ~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~-l~~-~~p~~~~~l~-------~L~~L~L~~n~l~~~~p~--~~~~l~~L 231 (764)
+|++|.+.+.+|..|+++++|++|+|++|+ +++ .+|..++.++ +|++|++++|+++ .+|. .++++++|
T Consensus 497 ~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L 575 (876)
T 4ecn_A 497 ELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKL 575 (876)
T ss_dssp EEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTC
T ss_pred ECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCC
Confidence 999999999999999999999999999998 888 7888776665 9999999999999 8888 89999999
Q ss_pred CEEeeeCCcCCCCCccchhcCCCCCEEEcCCCCCCCCCCC-CccCCcc-ccccccccccccccCCccccCCCC--CCEEe
Q 004275 232 DRLDLQGTSLEGPIPSTISQLKNLTELRISDLKGSSSSFP-NLQDMKK-MERLILRNCLITGRIPEYIEDMTD--LKILD 307 (764)
Q Consensus 232 ~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~-~l~~l~~-L~~L~Ls~N~l~~~~p~~~~~l~~--L~~L~ 307 (764)
+.|+|++|+++ .+| .++.+++|+.|++++|.+. .+| .+..+++ |+.|++++|.++ .+|..+..++. |+.|+
T Consensus 576 ~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~--~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~ 650 (876)
T 4ecn_A 576 GLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE--EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVD 650 (876)
T ss_dssp CEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS--CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEE
T ss_pred CEEECCCCCcc-cch-hhcCCCcceEEECcCCccc--cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEE
Confidence 99999999998 778 8999999999999997766 444 4888888 999999999998 78887776654 99999
Q ss_pred ccCCCCCCCccccc---c--CCCCCCEEeccCCcCcCCCChhhh---cCCCeEEeecCcCCCCCCccc
Q 004275 308 LSFNQLTGPVPGIL---Q--NLKKIDYIFLTNNSLSGTLPDWIL---TSEKNLDLSYNNFTESSPATC 367 (764)
Q Consensus 308 Ls~N~l~g~~p~~~---~--~l~~L~~L~L~~N~l~g~~p~~~~---~~l~~L~Ls~N~l~~~~p~~~ 367 (764)
+++|++++.+|... . .+++|+.|++++|+++ .+|..+. +.++.|+|++|+++..++..+
T Consensus 651 Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~-~lp~~~~~~l~~L~~L~Ls~N~L~~ip~~~~ 717 (876)
T 4ecn_A 651 FSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQ-KFPTELFATGSPISTIILSNNLMTSIPENSL 717 (876)
T ss_dssp CCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCC-SCCHHHHHTTCCCSEEECCSCCCSCCCTTSS
T ss_pred CcCCcCCCccccchhhhccccCCCcCEEEccCCcCC-ccCHHHHccCCCCCEEECCCCcCCccChHHh
Confidence 99999998776533 2 3458999999999999 6777653 567899999999996555444
No 5
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=9.4e-38 Score=373.78 Aligned_cols=282 Identities=33% Similarity=0.466 Sum_probs=245.4
Q ss_pred eeEEEEEcCCCcccccCCccCCCC-CCCCEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCcC-cCCCCCCCEE
Q 004275 85 CHVTVILLKGFNLAGVIPEEFGNL-TFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLE-IGDISTLEEL 162 (764)
Q Consensus 85 ~~v~~L~L~~~~l~g~~p~~l~~L-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~-~~~l~~L~~L 162 (764)
.+++.|++++|.+.+.+|..+..+ ++|++|+|++|.+++.+|..|+.+++|++|+|++|.+++.+|.. ++.+++|++|
T Consensus 269 ~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L 348 (768)
T 3rgz_A 269 KSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVL 348 (768)
T ss_dssp TTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEE
T ss_pred CCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEE
Confidence 468899999999999999888775 99999999999999999999999999999999999999888876 8899999999
Q ss_pred EeeCCcCCCCCCccCCCCC-CCcEEEccCccCCCCCcccccC--CCCCcEEEccCccCCCcCcccccCCCCCCEEeeeCC
Q 004275 163 VLEDNQLVGPLPENLGNLK-SLRRILLSSNNFTGSIPESYGN--LKNLTEFRIDGSNLTGRIPNFIGNWTKLDRLDLQGT 239 (764)
Q Consensus 163 ~Ls~N~l~~~~p~~l~~l~-~L~~L~Ls~N~l~~~~p~~~~~--l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N 239 (764)
+|++|++++.+|..+.+++ +|++|++++|++++.+|..+.. +++|++|++++|.+++.+|..+.++++|++|++++|
T Consensus 349 ~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N 428 (768)
T 3rgz_A 349 DLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFN 428 (768)
T ss_dssp ECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSS
T ss_pred eCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCccccccCHHHhcCCCCCEEECcCC
Confidence 9999999988998888887 8999999999998888887776 788999999999998888888888999999999999
Q ss_pred cCCCCCccchhcCCCCCEEEcCCCCCCCCCCCCccCCccccccccccccccccCCccccCCCCCCEEeccCCCCCCCccc
Q 004275 240 SLEGPIPSTISQLKNLTELRISDLKGSSSSFPNLQDMKKMERLILRNCLITGRIPEYIEDMTDLKILDLSFNQLTGPVPG 319 (764)
Q Consensus 240 ~l~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~ 319 (764)
++++.+|..++.+++|+.|++++|.........+..+++|++|++++|++++.+|..+..+++|++|++++|++++.+|.
T Consensus 429 ~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~ 508 (768)
T 3rgz_A 429 YLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPK 508 (768)
T ss_dssp EEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCG
T ss_pred cccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCCh
Confidence 99888888889999999999988665444334478888899999999999888888888889999999999999888888
Q ss_pred cccCCCCCCEEeccCCcCcCCCChhh--hcCCCeEEeecCcCCCCCCcc
Q 004275 320 ILQNLKKIDYIFLTNNSLSGTLPDWI--LTSEKNLDLSYNNFTESSPAT 366 (764)
Q Consensus 320 ~~~~l~~L~~L~L~~N~l~g~~p~~~--~~~l~~L~Ls~N~l~~~~p~~ 366 (764)
.+..+++|++|++++|+++|.+|..+ .+.++.||+++|+++|.+|..
T Consensus 509 ~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~ 557 (768)
T 3rgz_A 509 WIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAA 557 (768)
T ss_dssp GGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGG
T ss_pred HHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChH
Confidence 88889999999999999998888877 456788999999988887754
No 6
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=7.8e-35 Score=340.81 Aligned_cols=284 Identities=18% Similarity=0.244 Sum_probs=247.5
Q ss_pred cccccCCccCCCCCCCCEEEccCCcCCcc-----------------Cchhhh--cCCCCcEEecccCcCcccCCcCcCCC
Q 004275 96 NLAGVIPEEFGNLTFLQEVDLSRNYFNGS-----------------LPKSFA--RLQNLTKLLILGNRLSGSIPLEIGDI 156 (764)
Q Consensus 96 ~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~-----------------~p~~~~--~l~~L~~L~Ls~n~l~~~~p~~~~~l 156 (764)
+++| +|..|+++++|++|+|++|.+++. +|+.++ ++++|++|+|++|.+.+.+|..|+++
T Consensus 194 ~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l 272 (636)
T 4eco_A 194 NITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKAL 272 (636)
T ss_dssp EEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTC
T ss_pred CCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcC
Confidence 3445 888999999999999999999986 999999 99999999999999999999999999
Q ss_pred CCCCEEEeeCCc-CCC-CCCccCCCC------CCCcEEEccCccCCCCCcc--cccCCCCCcEEEccCccCCCcCccccc
Q 004275 157 STLEELVLEDNQ-LVG-PLPENLGNL------KSLRRILLSSNNFTGSIPE--SYGNLKNLTEFRIDGSNLTGRIPNFIG 226 (764)
Q Consensus 157 ~~L~~L~Ls~N~-l~~-~~p~~l~~l------~~L~~L~Ls~N~l~~~~p~--~~~~l~~L~~L~L~~n~l~~~~p~~~~ 226 (764)
++|++|+|++|+ +++ .+|..++++ ++|++|++++|+++ .+|. .++++++|++|++++|.++|.+| .++
T Consensus 273 ~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~ 350 (636)
T 4eco_A 273 PEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFG 350 (636)
T ss_dssp SSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCE
T ss_pred CCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhC
Confidence 999999999998 998 899988877 99999999999999 8898 99999999999999999999999 899
Q ss_pred CCCCCCEEeeeCCcCCCCCccchhcCCC-CCEEEcCCCCCCCCCCCC-ccCC--ccccccccccccccccCCcccc----
Q 004275 227 NWTKLDRLDLQGTSLEGPIPSTISQLKN-LTELRISDLKGSSSSFPN-LQDM--KKMERLILRNCLITGRIPEYIE---- 298 (764)
Q Consensus 227 ~l~~L~~L~L~~N~l~~~~p~~l~~l~~-L~~L~L~~n~~~~~~~~~-l~~l--~~L~~L~Ls~N~l~~~~p~~~~---- 298 (764)
.+++|++|++++|+++ .+|..+..+++ |++|++++|.+. .+|. +..+ ++|++|++++|.+++.+|..+.
T Consensus 351 ~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~--~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~ 427 (636)
T 4eco_A 351 SEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK--YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDP 427 (636)
T ss_dssp EEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS--SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCS
T ss_pred CCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc--ccchhhhhcccCccCEEECcCCcCCCcchhhhccccc
Confidence 9999999999999999 88889999999 999999997766 4554 4443 4899999999999999999888
Q ss_pred ---CCCCCCEEeccCCCCCCCccccccCCCCCCEEeccCCcCcCCCChhhhc----------CCCeEEeecCcCCCCCCc
Q 004275 299 ---DMTDLKILDLSFNQLTGPVPGILQNLKKIDYIFLTNNSLSGTLPDWILT----------SEKNLDLSYNNFTESSPA 365 (764)
Q Consensus 299 ---~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~----------~l~~L~Ls~N~l~~~~p~ 365 (764)
.+++|++|++++|++++..+..+..+++|++|++++|+++ .+|..... .++.|+|++|+++..++.
T Consensus 428 ~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~lp~~ 506 (636)
T 4eco_A 428 TPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLT-EIPKNSLKDENENFKNTYLLTSIDLRFNKLTKLSDD 506 (636)
T ss_dssp SCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCS-BCCSSSSEETTEECTTGGGCCEEECCSSCCCBCCGG
T ss_pred ccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCC-CcCHHHhccccccccccCCccEEECcCCcCCccChh
Confidence 8889999999999999555556777999999999999999 77776533 789999999999955444
Q ss_pred cc----ccc-cceeeccccCCCCCccc
Q 004275 366 TC----RES-RVNILSSFSSTGSNSVS 387 (764)
Q Consensus 366 ~~----~~~-~l~~~~~~~~~~~~~~~ 387 (764)
.. ..+ .+++..|...+ +|..+
T Consensus 507 ~~~~~l~~L~~L~Ls~N~l~~-ip~~~ 532 (636)
T 4eco_A 507 FRATTLPYLVGIDLSYNSFSK-FPTQP 532 (636)
T ss_dssp GSTTTCTTCCEEECCSSCCSS-CCCGG
T ss_pred hhhccCCCcCEEECCCCCCCC-cChhh
Confidence 33 222 46666666554 55443
No 7
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=1.7e-33 Score=316.46 Aligned_cols=300 Identities=19% Similarity=0.192 Sum_probs=226.4
Q ss_pred eeEEEEEcCCCcccccCCccCCCCCCCCEEEccCCcCCccC-chhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEE
Q 004275 85 CHVTVILLKGFNLAGVIPEEFGNLTFLQEVDLSRNYFNGSL-PKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELV 163 (764)
Q Consensus 85 ~~v~~L~L~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 163 (764)
.+++.|+|++|.+.+..|..|.++++|++|+|++|.+.+.+ |..|.++++|++|+|++|.+++..|..|+++++|++|+
T Consensus 30 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 109 (455)
T 3v47_A 30 AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLT 109 (455)
T ss_dssp TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEE
T ss_pred CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEe
Confidence 57999999999999998999999999999999999998665 56799999999999999999988899999999999999
Q ss_pred eeCCcCCCCCCcc--CCCCCCCcEEEccCccCCCCCccc-ccCCCCCcEEEccCccCCCcCcccccCC------------
Q 004275 164 LEDNQLVGPLPEN--LGNLKSLRRILLSSNNFTGSIPES-YGNLKNLTEFRIDGSNLTGRIPNFIGNW------------ 228 (764)
Q Consensus 164 Ls~N~l~~~~p~~--l~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~L~~n~l~~~~p~~~~~l------------ 228 (764)
|++|++++.+|.. +.++++|++|+|++|++++..|.. +.++++|++|++++|.+++..|..+..+
T Consensus 110 L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~ 189 (455)
T 3v47_A 110 LTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSS 189 (455)
T ss_dssp CTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTT
T ss_pred CCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhcccccccccccccc
Confidence 9999999866655 899999999999999999887876 8999999999999999998888766554
Q ss_pred ----------------------CCCCEEeeeCCcCCCCCccchhcC----------------------------------
Q 004275 229 ----------------------TKLDRLDLQGTSLEGPIPSTISQL---------------------------------- 252 (764)
Q Consensus 229 ----------------------~~L~~L~L~~N~l~~~~p~~l~~l---------------------------------- 252 (764)
++|++|++++|++++..|..+...
T Consensus 190 n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~ 269 (455)
T 3v47_A 190 ITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTF 269 (455)
T ss_dssp CBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTT
T ss_pred CcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchhhhccCccccc
Confidence 567777777777765554443322
Q ss_pred -----CCCCEEEcCCCCCCCCCCCCccCCccccccccccccccccCCccccCCCCCCEEeccCCCCCCCccccccCCCCC
Q 004275 253 -----KNLTELRISDLKGSSSSFPNLQDMKKMERLILRNCLITGRIPEYIEDMTDLKILDLSFNQLTGPVPGILQNLKKI 327 (764)
Q Consensus 253 -----~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L 327 (764)
++|+.|++++|++.......+..+++|++|++++|++++..|..+..+++|++|++++|++++..|..+..+++|
T Consensus 270 ~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 349 (455)
T 3v47_A 270 KGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKL 349 (455)
T ss_dssp GGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTC
T ss_pred ccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccC
Confidence 355566665544443333336666777777777777776666667677777777777777766666666777777
Q ss_pred CEEeccCCcCcCCCChhh--hcCCCeEEeecCcCCCCCCcc---cccc-cceeeccccCCCCC
Q 004275 328 DYIFLTNNSLSGTLPDWI--LTSEKNLDLSYNNFTESSPAT---CRES-RVNILSSFSSTGSN 384 (764)
Q Consensus 328 ~~L~L~~N~l~g~~p~~~--~~~l~~L~Ls~N~l~~~~p~~---~~~~-~l~~~~~~~~~~~~ 384 (764)
++|++++|++++..|..+ .+.++.|++++|++++.++.. +..+ .+++..|...+.+|
T Consensus 350 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 350 EVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp CEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred CEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCC
Confidence 777777777766666655 345667777777777665543 2222 34555554444443
No 8
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=9.9e-34 Score=302.24 Aligned_cols=232 Identities=27% Similarity=0.444 Sum_probs=212.7
Q ss_pred CCCCEEEccCCcCCc--cCchhhhcCCCCcEEeccc-CcCcccCCcCcCCCCCCCEEEeeCCcCCCCCCccCCCCCCCcE
Q 004275 109 TFLQEVDLSRNYFNG--SLPKSFARLQNLTKLLILG-NRLSGSIPLEIGDISTLEELVLEDNQLVGPLPENLGNLKSLRR 185 (764)
Q Consensus 109 ~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~-n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~ 185 (764)
.++++|+|++|.+++ .+|..|.++++|++|+|++ |.+.+.+|..|+++++|++|+|++|++++.+|..|.++++|++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 129 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCE
Confidence 579999999999999 8999999999999999995 9999999999999999999999999999999999999999999
Q ss_pred EEccCccCCCCCcccccCCCCCcEEEccCccCCCcCcccccCCC-CCCEEeeeCCcCCCCCccchhcCCCCCEEEcCCCC
Q 004275 186 ILLSSNNFTGSIPESYGNLKNLTEFRIDGSNLTGRIPNFIGNWT-KLDRLDLQGTSLEGPIPSTISQLKNLTELRISDLK 264 (764)
Q Consensus 186 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~n~ 264 (764)
|+|++|++++.+|..+..+++|++|++++|.+++.+|..+..++ +|++|++++|++++.+|..+..++
T Consensus 130 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~----------- 198 (313)
T 1ogq_A 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN----------- 198 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-----------
T ss_pred EeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-----------
Confidence 99999999999999999999999999999999999999999998 999999999999988887776553
Q ss_pred CCCCCCCCccCCccccccccccccccccCCccccCCCCCCEEeccCCCCCCCccccccCCCCCCEEeccCCcCcCCCChh
Q 004275 265 GSSSSFPNLQDMKKMERLILRNCLITGRIPEYIEDMTDLKILDLSFNQLTGPVPGILQNLKKIDYIFLTNNSLSGTLPDW 344 (764)
Q Consensus 265 ~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~ 344 (764)
|++|++++|.+++.+|..+..+++|+.|++++|++++.+|. +..+++|++|++++|++++.+|.+
T Consensus 199 --------------L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~ 263 (313)
T 1ogq_A 199 --------------LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQG 263 (313)
T ss_dssp --------------CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGG
T ss_pred --------------ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChH
Confidence 45566667788888899999999999999999999987776 788999999999999999999998
Q ss_pred h--hcCCCeEEeecCcCCCCCCcc
Q 004275 345 I--LTSEKNLDLSYNNFTESSPAT 366 (764)
Q Consensus 345 ~--~~~l~~L~Ls~N~l~~~~p~~ 366 (764)
+ .+.++.|++++|+++|.+|..
T Consensus 264 l~~l~~L~~L~Ls~N~l~~~ip~~ 287 (313)
T 1ogq_A 264 LTQLKFLHSLNVSFNNLCGEIPQG 287 (313)
T ss_dssp GGGCTTCCEEECCSSEEEEECCCS
T ss_pred HhcCcCCCEEECcCCcccccCCCC
Confidence 8 466889999999999998876
No 9
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=1.5e-31 Score=323.44 Aligned_cols=277 Identities=23% Similarity=0.222 Sum_probs=195.3
Q ss_pred eeEEEEEcCCCcccccCCccCCCCCCCCEEEccCCcCCccC-chhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEE
Q 004275 85 CHVTVILLKGFNLAGVIPEEFGNLTFLQEVDLSRNYFNGSL-PKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELV 163 (764)
Q Consensus 85 ~~v~~L~L~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 163 (764)
.+++.|+|++|.+.+..|..|.++++|++|||++|.+.+.+ |..|.++++|++|+|++|.+.+..|..|+++++|++|+
T Consensus 24 ~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 103 (844)
T 3j0a_A 24 NTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELR 103 (844)
T ss_dssp TTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEE
T ss_pred CCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEee
Confidence 46899999999999988999999999999999999766666 78899999999999999999988899999999999999
Q ss_pred eeCCcCCCCCCcc--CCCCCCCcEEEccCccCCCCCc-ccccCCCCCcEEEccCccCCCcCcccccCC--CCCCEEeeeC
Q 004275 164 LEDNQLVGPLPEN--LGNLKSLRRILLSSNNFTGSIP-ESYGNLKNLTEFRIDGSNLTGRIPNFIGNW--TKLDRLDLQG 238 (764)
Q Consensus 164 Ls~N~l~~~~p~~--l~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l--~~L~~L~L~~ 238 (764)
|++|.+++.+|.. +.++++|++|+|++|.+++..+ ..|+++++|++|++++|.+++..+..+..+ ++|+.|++++
T Consensus 104 Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~~ 183 (844)
T 3j0a_A 104 LYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAA 183 (844)
T ss_dssp CTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEECC
T ss_pred CcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEECCC
Confidence 9999999877765 8899999999999999987655 578999999999999999988887777666 6666667766
Q ss_pred CcCCCCCccchhcCCC------CCEEEcCCCC------------------------------------------------
Q 004275 239 TSLEGPIPSTISQLKN------LTELRISDLK------------------------------------------------ 264 (764)
Q Consensus 239 N~l~~~~p~~l~~l~~------L~~L~L~~n~------------------------------------------------ 264 (764)
|.+.+..|..+..+++ |+.|++++|.
T Consensus 184 n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~l 263 (844)
T 3j0a_A 184 NSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGL 263 (844)
T ss_dssp SBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTTTT
T ss_pred CccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChhhhhcc
Confidence 6666655555444443 5556555542
Q ss_pred --------------CCCCCCCCccCCccccccccccccccccCCccccCCCCCCEEeccCCCCCCCccccccCCCCCCEE
Q 004275 265 --------------GSSSSFPNLQDMKKMERLILRNCLITGRIPEYIEDMTDLKILDLSFNQLTGPVPGILQNLKKIDYI 330 (764)
Q Consensus 265 --------------~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L 330 (764)
+.......+..+++|+.|+|++|++++..|..|..+++|++|++++|++++..|..+..+++|++|
T Consensus 264 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 343 (844)
T 3j0a_A 264 ARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYI 343 (844)
T ss_dssp TTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEE
T ss_pred ccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEE
Confidence 222222224444455555555555554444445555555555555555554445555555555555
Q ss_pred eccCCcCcCCCChhh--hcCCCeEEeecCcCCC
Q 004275 331 FLTNNSLSGTLPDWI--LTSEKNLDLSYNNFTE 361 (764)
Q Consensus 331 ~L~~N~l~g~~p~~~--~~~l~~L~Ls~N~l~~ 361 (764)
++++|++++..+..+ .+.++.|+|++|.+++
T Consensus 344 ~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~ 376 (844)
T 3j0a_A 344 DLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTT 376 (844)
T ss_dssp ECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCC
T ss_pred ECCCCCCCccChhhhcCCCCCCEEECCCCCCCc
Confidence 555555544333333 2334455555555544
No 10
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=3.8e-32 Score=307.56 Aligned_cols=298 Identities=20% Similarity=0.241 Sum_probs=263.1
Q ss_pred CCceeccCCCC----CCceeeEEEEEcCCCcccccCCccCCCCCCCCEEEccCCcCCccCchhhhcCCCCcEEecccCcC
Q 004275 70 GSNFTCDCTYS----NNTVCHVTVILLKGFNLAGVIPEEFGNLTFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRL 145 (764)
Q Consensus 70 ~~gv~C~~~~~----~~~~~~v~~L~L~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l 145 (764)
|..|.|..... .....+++.|+|++|++.+..+..|..+++|++|+|++|.+++..|..|.++++|++|+|++|.+
T Consensus 13 ~~~v~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l 92 (477)
T 2id5_A 13 DRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRL 92 (477)
T ss_dssp TTEEECCSCCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred CCEEEeCCCCcCcCCCCCCCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcC
Confidence 55677753211 11234689999999999999899999999999999999999998899999999999999999999
Q ss_pred cccCCcCcCCCCCCCEEEeeCCcCCCCCCccCCCCCCCcEEEccCccCCCCCcccccCCCCCcEEEccCccCCCcCcccc
Q 004275 146 SGSIPLEIGDISTLEELVLEDNQLVGPLPENLGNLKSLRRILLSSNNFTGSIPESYGNLKNLTEFRIDGSNLTGRIPNFI 225 (764)
Q Consensus 146 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~ 225 (764)
+...+..|.++++|++|+|++|++.+..|..|.++++|++|+|++|.+++..+..|..+++|++|++++|.+++..+..+
T Consensus 93 ~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l 172 (477)
T 2id5_A 93 KLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEAL 172 (477)
T ss_dssp CSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHH
T ss_pred CccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHh
Confidence 96666678999999999999999998889999999999999999999998889999999999999999999998877889
Q ss_pred cCCCCCCEEeeeCCcCCCCCccchhcCCCCCEEEcCCCCCCCCCCCCccCCccccccccccccccccCCccccCCCCCCE
Q 004275 226 GNWTKLDRLDLQGTSLEGPIPSTISQLKNLTELRISDLKGSSSSFPNLQDMKKMERLILRNCLITGRIPEYIEDMTDLKI 305 (764)
Q Consensus 226 ~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 305 (764)
..+++|+.|++++|.+.+..+..+..+++|+.|++++|+......+......+|++|++++|++++..+..+..+++|+.
T Consensus 173 ~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 252 (477)
T 2id5_A 173 SHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRF 252 (477)
T ss_dssp TTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCE
T ss_pred cccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccccCe
Confidence 99999999999999999888889999999999999997655444444555569999999999999655567899999999
Q ss_pred EeccCCCCCCCccccccCCCCCCEEeccCCcCcCCCChhh--hcCCCeEEeecCcCCCCCCccc
Q 004275 306 LDLSFNQLTGPVPGILQNLKKIDYIFLTNNSLSGTLPDWI--LTSEKNLDLSYNNFTESSPATC 367 (764)
Q Consensus 306 L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~--~~~l~~L~Ls~N~l~~~~p~~~ 367 (764)
|+|++|++++..+..+..+++|+.|++++|++++..|..+ .+.++.|+|++|++++.++..+
T Consensus 253 L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 316 (477)
T 2id5_A 253 LNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVF 316 (477)
T ss_dssp EECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGB
T ss_pred eECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHc
Confidence 9999999998888889999999999999999998888877 4678899999999999877653
No 11
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.98 E-value=2e-32 Score=307.74 Aligned_cols=282 Identities=20% Similarity=0.256 Sum_probs=246.9
Q ss_pred eeeEEEEEcCCCcccccC-CccCCCCCCCCEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCcC--cCCCCCCC
Q 004275 84 VCHVTVILLKGFNLAGVI-PEEFGNLTFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLE--IGDISTLE 160 (764)
Q Consensus 84 ~~~v~~L~L~~~~l~g~~-p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~--~~~l~~L~ 160 (764)
..+++.|+|++|.+.+.+ +..|..+++|++|+|++|.+++..|..|+++++|++|+|++|.+++.+|.. |+.+++|+
T Consensus 53 l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~ 132 (455)
T 3v47_A 53 LQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLE 132 (455)
T ss_dssp CTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCC
T ss_pred CccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCC
Confidence 346899999999988666 457899999999999999999888999999999999999999999866655 89999999
Q ss_pred EEEeeCCcCCCCCCcc-CCCCCCCcEEEccCccCCCCCcccccCC----------------------------------C
Q 004275 161 ELVLEDNQLVGPLPEN-LGNLKSLRRILLSSNNFTGSIPESYGNL----------------------------------K 205 (764)
Q Consensus 161 ~L~Ls~N~l~~~~p~~-l~~l~~L~~L~Ls~N~l~~~~p~~~~~l----------------------------------~ 205 (764)
+|+|++|++++..|.. +.++++|++|++++|++++..|..+..+ +
T Consensus 133 ~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~ 212 (455)
T 3v47_A 133 MLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNT 212 (455)
T ss_dssp EEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTC
T ss_pred EEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhccccccccccccccCcccccchhhccccccccccccc
Confidence 9999999999887876 8899999999999999998877766544 6
Q ss_pred CCcEEEccCccCCCcCcccccC---------------------------------------CCCCCEEeeeCCcCCCCCc
Q 004275 206 NLTEFRIDGSNLTGRIPNFIGN---------------------------------------WTKLDRLDLQGTSLEGPIP 246 (764)
Q Consensus 206 ~L~~L~L~~n~l~~~~p~~~~~---------------------------------------l~~L~~L~L~~N~l~~~~p 246 (764)
+|++|++++|.+++..|..+.. .++|+.|++++|.+++.+|
T Consensus 213 ~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~ 292 (455)
T 3v47_A 213 SITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLK 292 (455)
T ss_dssp EEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECT
T ss_pred eeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchhhhccCcccccccccccCceEEEecCccccccch
Confidence 7999999999887665544322 2589999999999999999
Q ss_pred cchhcCCCCCEEEcCCCCCCCCCCCCccCCccccccccccccccccCCccccCCCCCCEEeccCCCCCCCccccccCCCC
Q 004275 247 STISQLKNLTELRISDLKGSSSSFPNLQDMKKMERLILRNCLITGRIPEYIEDMTDLKILDLSFNQLTGPVPGILQNLKK 326 (764)
Q Consensus 247 ~~l~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~ 326 (764)
..+..+++|++|++++|.+.......+..+++|++|++++|.+++..|..+..+++|++|++++|++++..|..+..+++
T Consensus 293 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 372 (455)
T 3v47_A 293 SVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPN 372 (455)
T ss_dssp TTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTT
T ss_pred hhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhcccccc
Confidence 99999999999999998776555556889999999999999999888999999999999999999999888999999999
Q ss_pred CCEEeccCCcCcCCCChhh--hcCCCeEEeecCcCCCCCCc
Q 004275 327 IDYIFLTNNSLSGTLPDWI--LTSEKNLDLSYNNFTESSPA 365 (764)
Q Consensus 327 L~~L~L~~N~l~g~~p~~~--~~~l~~L~Ls~N~l~~~~p~ 365 (764)
|++|++++|++++..+..+ .+.++.|++++|++++..|.
T Consensus 373 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 413 (455)
T 3v47_A 373 LKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 413 (455)
T ss_dssp CCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred ccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCCc
Confidence 9999999999997655554 46788999999999998774
No 12
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.97 E-value=1.7e-31 Score=307.50 Aligned_cols=307 Identities=19% Similarity=0.197 Sum_probs=228.7
Q ss_pred CCceeccCCCC------CCceeeEEEEEcCCCcccccCCccCCCCCCCCEEEccCCcCCccCchhhhcCCCCcEEecccC
Q 004275 70 GSNFTCDCTYS------NNTVCHVTVILLKGFNLAGVIPEEFGNLTFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGN 143 (764)
Q Consensus 70 ~~gv~C~~~~~------~~~~~~v~~L~L~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n 143 (764)
|.|+ |++... .....+++.|+|++|++.+..|..|..+++|++|+|++|++++..|..|+.+++|++|+|++|
T Consensus 6 ~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n 84 (549)
T 2z81_A 6 ASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDN 84 (549)
T ss_dssp TTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTS
T ss_pred CCce-EECCCCccccccccCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCC
Confidence 6676 765321 111246999999999999988889999999999999999999888889999999999999999
Q ss_pred cCcccCCcCcCCCCCCCEEEeeCCcCCC-CCCccCCCCCCCcEEEccCccCCCCCc-ccccCCCCCcEEEccCccCCCcC
Q 004275 144 RLSGSIPLEIGDISTLEELVLEDNQLVG-PLPENLGNLKSLRRILLSSNNFTGSIP-ESYGNLKNLTEFRIDGSNLTGRI 221 (764)
Q Consensus 144 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~l~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~n~l~~~~ 221 (764)
.+++..|..|+++++|++|+|++|.+++ ..|..++++++|++|++++|++.+.+| ..+.++++|++|++++|.+++..
T Consensus 85 ~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 164 (549)
T 2z81_A 85 HLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQ 164 (549)
T ss_dssp CCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEEC
T ss_pred ccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccC
Confidence 9997777779999999999999999986 467789999999999999998555554 67899999999999999998887
Q ss_pred cccccCC------------------------CCCCEEeeeCCcCCCCC--ccc---------------------------
Q 004275 222 PNFIGNW------------------------TKLDRLDLQGTSLEGPI--PST--------------------------- 248 (764)
Q Consensus 222 p~~~~~l------------------------~~L~~L~L~~N~l~~~~--p~~--------------------------- 248 (764)
|..++.+ ++|++|++++|++++.. |..
T Consensus 165 ~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~ 244 (549)
T 2z81_A 165 SQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELL 244 (549)
T ss_dssp TTTTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHHH
T ss_pred hhhhhccccCceEecccCcccccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhHHHHHH
Confidence 7776654 45566666666655421 000
Q ss_pred --hhcCC-----------------------------------------------------------CCCEEEcCCCCCCC
Q 004275 249 --ISQLK-----------------------------------------------------------NLTELRISDLKGSS 267 (764)
Q Consensus 249 --l~~l~-----------------------------------------------------------~L~~L~L~~n~~~~ 267 (764)
+..++ +|+.|++++|.+.
T Consensus 245 ~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~- 323 (549)
T 2z81_A 245 KLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVF- 323 (549)
T ss_dssp GGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCC-
T ss_pred HHhhhhccccccccccccccccccccccchhhhhhhcccccccccccccchhhhcccchhhhhhcccceEEEeccCccc-
Confidence 01111 2222222222111
Q ss_pred CCCCC--ccCCccccccccccccccccCC---ccccCCCCCCEEeccCCCCCCCcc--ccccCCCCCCEEeccCCcCcCC
Q 004275 268 SSFPN--LQDMKKMERLILRNCLITGRIP---EYIEDMTDLKILDLSFNQLTGPVP--GILQNLKKIDYIFLTNNSLSGT 340 (764)
Q Consensus 268 ~~~~~--l~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~Ls~N~l~g~~p--~~~~~l~~L~~L~L~~N~l~g~ 340 (764)
.+|. +..+++|++|++++|++++.+| ..+..+++|++|++++|++++..+ ..+..+++|++|++++|+++ .
T Consensus 324 -~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ 401 (549)
T 2z81_A 324 -LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-P 401 (549)
T ss_dssp -CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-C
T ss_pred -cCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCc-c
Confidence 1222 2357899999999999998764 347788999999999999986543 56889999999999999998 5
Q ss_pred CChhh--hcCCCeEEeecCcCCCCCCcccccc-cceeeccccC
Q 004275 341 LPDWI--LTSEKNLDLSYNNFTESSPATCRES-RVNILSSFSS 380 (764)
Q Consensus 341 ~p~~~--~~~l~~L~Ls~N~l~~~~p~~~~~~-~l~~~~~~~~ 380 (764)
+|..+ .+.++.|++++|++++.+......+ .+++..|...
T Consensus 402 lp~~~~~~~~L~~L~Ls~N~l~~l~~~~~~~L~~L~Ls~N~l~ 444 (549)
T 2z81_A 402 MPDSCQWPEKMRFLNLSSTGIRVVKTCIPQTLEVLDVSNNNLD 444 (549)
T ss_dssp CCSCCCCCTTCCEEECTTSCCSCCCTTSCTTCSEEECCSSCCS
T ss_pred CChhhcccccccEEECCCCCcccccchhcCCceEEECCCCChh
Confidence 77655 4568899999999987654433333 4566655443
No 13
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.97 E-value=4e-31 Score=308.25 Aligned_cols=295 Identities=16% Similarity=0.157 Sum_probs=239.0
Q ss_pred eeEEEEEcCCCcccccCCccCCCCCCCCEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEe
Q 004275 85 CHVTVILLKGFNLAGVIPEEFGNLTFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVL 164 (764)
Q Consensus 85 ~~v~~L~L~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 164 (764)
.+++.|+|++|.+++..|..|.++++|++|+|++|.+++..|..|+++++|++|+|++|++++..|..|+++++|++|+|
T Consensus 33 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 112 (606)
T 3t6q_A 33 NSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFF 112 (606)
T ss_dssp TTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEEC
T ss_pred CcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeec
Confidence 36899999999999888889999999999999999999888999999999999999999999888999999999999999
Q ss_pred eCCcCCCCCCccCCCCCCCcEEEccCccCCCCCcccccCCCCCcEEEccCccCCCcCcccccCCCCCC--EEeeeCCcCC
Q 004275 165 EDNQLVGPLPENLGNLKSLRRILLSSNNFTGSIPESYGNLKNLTEFRIDGSNLTGRIPNFIGNWTKLD--RLDLQGTSLE 242 (764)
Q Consensus 165 s~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~--~L~L~~N~l~ 242 (764)
++|++++..|..+.++++|++|++++|++++..+..+..+++|++|++++|.+++..|..++.+++|+ .|++++|.++
T Consensus 113 ~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l~ 192 (606)
T 3t6q_A 113 IQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIA 192 (606)
T ss_dssp TTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCCC
T ss_pred cccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCccC
Confidence 99999876677888999999999999998874434455588888888888888877777777777776 5666665554
Q ss_pred C---------------------------------------------------------------------------CCcc
Q 004275 243 G---------------------------------------------------------------------------PIPS 247 (764)
Q Consensus 243 ~---------------------------------------------------------------------------~~p~ 247 (764)
+ ..+.
T Consensus 193 ~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~~~~ 272 (606)
T 3t6q_A 193 GIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSN 272 (606)
T ss_dssp EECTTTTTTCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSCCTT
T ss_pred ccChhHhhhccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCccCHH
Confidence 3 3334
Q ss_pred chhcCCCCCEEEcCCCCCCCCCCC-CccCCccccccccccccccccCCccccCCCCCCEEeccCCCCCCCccc-cccCCC
Q 004275 248 TISQLKNLTELRISDLKGSSSSFP-NLQDMKKMERLILRNCLITGRIPEYIEDMTDLKILDLSFNQLTGPVPG-ILQNLK 325 (764)
Q Consensus 248 ~l~~l~~L~~L~L~~n~~~~~~~~-~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~-~~~~l~ 325 (764)
.|..+++|++|++++|.+. .+| .+..+++|++|++++|.+++..|..+..+++|++|++++|.+.+.+|. .+..++
T Consensus 273 ~~~~l~~L~~L~l~~n~l~--~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~ 350 (606)
T 3t6q_A 273 TFHCFSGLQELDLTATHLS--ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLE 350 (606)
T ss_dssp TTTTCTTCSEEECTTSCCS--CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCT
T ss_pred HhccccCCCEEeccCCccC--CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhccC
Confidence 4777889999999997655 344 488899999999999999988888899999999999999999876665 588899
Q ss_pred CCCEEeccCCcCcCCC--Chhh--hcCCCeEEeecCcCCCCCCccc---ccc-cceeeccccCC
Q 004275 326 KIDYIFLTNNSLSGTL--PDWI--LTSEKNLDLSYNNFTESSPATC---RES-RVNILSSFSST 381 (764)
Q Consensus 326 ~L~~L~L~~N~l~g~~--p~~~--~~~l~~L~Ls~N~l~~~~p~~~---~~~-~l~~~~~~~~~ 381 (764)
+|++|++++|.+++.. |..+ .+.++.|++++|++++.+|... ..+ .+++..|...+
T Consensus 351 ~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 414 (606)
T 3t6q_A 351 NLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKV 414 (606)
T ss_dssp TCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEEC
T ss_pred cCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCC
Confidence 9999999999998765 5444 4667899999999888776653 233 35555554443
No 14
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.97 E-value=1.5e-31 Score=319.10 Aligned_cols=274 Identities=21% Similarity=0.260 Sum_probs=238.0
Q ss_pred eeeEEEEEcCCCcccc-----------------cCCccCC--CCCCCCEEEccCCcCCccCchhhhcCCCCcEEecccCc
Q 004275 84 VCHVTVILLKGFNLAG-----------------VIPEEFG--NLTFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNR 144 (764)
Q Consensus 84 ~~~v~~L~L~~~~l~g-----------------~~p~~l~--~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~ 144 (764)
..+++.|+|++|.++| .+|+.++ ++++|++|+|++|.+.+.+|..|+++++|++|+|++|+
T Consensus 447 L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~ 526 (876)
T 4ecn_A 447 LTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNR 526 (876)
T ss_dssp CTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCT
T ss_pred CCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCC
Confidence 3468999999999999 4999988 99999999999999999999999999999999999998
Q ss_pred -Ccc-cCCcCcCCCC-------CCCEEEeeCCcCCCCCCc--cCCCCCCCcEEEccCccCCCCCcccccCCCCCcEEEcc
Q 004275 145 -LSG-SIPLEIGDIS-------TLEELVLEDNQLVGPLPE--NLGNLKSLRRILLSSNNFTGSIPESYGNLKNLTEFRID 213 (764)
Q Consensus 145 -l~~-~~p~~~~~l~-------~L~~L~Ls~N~l~~~~p~--~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 213 (764)
+++ .+|..++.++ +|++|+|++|+++ .+|. .++++++|+.|+|++|+++ .+| .++.+++|+.|+++
T Consensus 527 ~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls 603 (876)
T 4ecn_A 527 GISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLD 603 (876)
T ss_dssp TSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECC
T ss_pred CcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECc
Confidence 998 8998776655 9999999999999 8898 8999999999999999999 888 89999999999999
Q ss_pred CccCCCcCcccccCCCC-CCEEeeeCCcCCCCCccchhcCCC--CCEEEcCCCCCCCCCCCCcc------CCcccccccc
Q 004275 214 GSNLTGRIPNFIGNWTK-LDRLDLQGTSLEGPIPSTISQLKN--LTELRISDLKGSSSSFPNLQ------DMKKMERLIL 284 (764)
Q Consensus 214 ~n~l~~~~p~~~~~l~~-L~~L~L~~N~l~~~~p~~l~~l~~--L~~L~L~~n~~~~~~~~~l~------~l~~L~~L~L 284 (764)
+|.++ .+|..+..+++ |+.|+|++|.++ .+|..+..++. |+.|++++|.+.. .+|.+. .+++|+.|++
T Consensus 604 ~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g-~ip~l~~~l~~~~~~~L~~L~L 680 (876)
T 4ecn_A 604 YNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGS-EGRNISCSMDDYKGINASTVTL 680 (876)
T ss_dssp SSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTT-TSSSCSSCTTTCCCCCEEEEEC
T ss_pred CCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcCCcCCC-ccccchhhhccccCCCcCEEEc
Confidence 99999 89999999999 999999999999 78888877754 9999999976543 334322 4568999999
Q ss_pred ccccccccCCccc-cCCCCCCEEeccCCCCCCCccccccC--------CCCCCEEeccCCcCcCCCChhhh----cCCCe
Q 004275 285 RNCLITGRIPEYI-EDMTDLKILDLSFNQLTGPVPGILQN--------LKKIDYIFLTNNSLSGTLPDWIL----TSEKN 351 (764)
Q Consensus 285 s~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~g~~p~~~~~--------l~~L~~L~L~~N~l~g~~p~~~~----~~l~~ 351 (764)
++|.++ .+|..+ ..+++|+.|+|++|+++ .+|..+.. +++|+.|+|++|+++ .+|..+. +.++.
T Consensus 681 s~N~L~-~lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~ 757 (876)
T 4ecn_A 681 SYNEIQ-KFPTELFATGSPISTIILSNNLMT-SIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSN 757 (876)
T ss_dssp CSSCCC-SCCHHHHHTTCCCSEEECCSCCCS-CCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCE
T ss_pred cCCcCC-ccCHHHHccCCCCCEEECCCCcCC-ccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCE
Confidence 999999 566554 58899999999999999 56654333 238999999999999 7887764 67889
Q ss_pred EEeecCcCCCCCCcc
Q 004275 352 LDLSYNNFTESSPAT 366 (764)
Q Consensus 352 L~Ls~N~l~~~~p~~ 366 (764)
|+|++|++++.++..
T Consensus 758 L~Ls~N~L~~lp~~l 772 (876)
T 4ecn_A 758 MDVSYNCFSSFPTQP 772 (876)
T ss_dssp EECCSSCCSSCCCGG
T ss_pred EEeCCCCCCccchhh
Confidence 999999999954443
No 15
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.97 E-value=4.5e-31 Score=302.05 Aligned_cols=273 Identities=19% Similarity=0.172 Sum_probs=186.1
Q ss_pred eeEEEEEcCCCcccccCCccCCCCCCCCEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEe
Q 004275 85 CHVTVILLKGFNLAGVIPEEFGNLTFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVL 164 (764)
Q Consensus 85 ~~v~~L~L~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 164 (764)
.+++.|+|++|.+.+..|..|..+++|++|+|++|++++..|..|+++++|++|+|++|+++ .+|.. .+++|++|+|
T Consensus 21 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L 97 (520)
T 2z7x_B 21 QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCH--PTVNLKHLDL 97 (520)
T ss_dssp TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEECC--CCCCCSEEEC
T ss_pred ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecCcc--ccCCccEEec
Confidence 46888999999988877788889999999999999998888888999999999999999988 56666 7889999999
Q ss_pred eCCcCCC-CCCccCCCCCCCcEEEccCccCCCCCcccccCCCCC--cEEEccCccC--CCcCcccccCCC----------
Q 004275 165 EDNQLVG-PLPENLGNLKSLRRILLSSNNFTGSIPESYGNLKNL--TEFRIDGSNL--TGRIPNFIGNWT---------- 229 (764)
Q Consensus 165 s~N~l~~-~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L--~~L~L~~n~l--~~~~p~~~~~l~---------- 229 (764)
++|++++ .+|..|+++++|++|++++|++++ ..+..+++| ++|++++|.+ .+..|..+..+.
T Consensus 98 ~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~~ 174 (520)
T 2z7x_B 98 SFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPT 174 (520)
T ss_dssp CSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEECCS
T ss_pred cCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeecccccccccccccccccccceEEEEecc
Confidence 9999887 577888889999999998888865 345556666 7777777776 555555444422
Q ss_pred -------------------------------------------------------------------------CCCEEee
Q 004275 230 -------------------------------------------------------------------------KLDRLDL 236 (764)
Q Consensus 230 -------------------------------------------------------------------------~L~~L~L 236 (764)
+|++|++
T Consensus 175 n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l 254 (520)
T 2z7x_B 175 NKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSI 254 (520)
T ss_dssp SSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEEE
T ss_pred CcchhhhhhhhhhcccceeeccccccccccccceeecchhhhccccchhhccccccccCHHHHHHHHHHhhhCcccEEEe
Confidence 5666666
Q ss_pred eCCcCCCCCccch-----hcCCCCCEEEcCCCCC--------------------------CCCCCCCccCCccccccccc
Q 004275 237 QGTSLEGPIPSTI-----SQLKNLTELRISDLKG--------------------------SSSSFPNLQDMKKMERLILR 285 (764)
Q Consensus 237 ~~N~l~~~~p~~l-----~~l~~L~~L~L~~n~~--------------------------~~~~~~~l~~l~~L~~L~Ls 285 (764)
++|+++|.+|..+ .++++|+.++++.|.. .... ....+++|++|+++
T Consensus 255 ~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~--~~~~l~~L~~L~Ls 332 (520)
T 2z7x_B 255 SNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSGTRMVHML--CPSKISPFLHLDFS 332 (520)
T ss_dssp EEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCCCSCTHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECC
T ss_pred ecccccCccccchhhcccccCceeEeccccccceecchhhhhcccccCceeEEEcCCCcccccc--chhhCCcccEEEeE
Confidence 6666666666655 4444433333333222 1111 11455666666666
Q ss_pred cccccccCCccccCCCCCCEEeccCCCCCC--CccccccCCCCCCEEeccCCcCcCCCChhh---hcCCCeEEeecCcCC
Q 004275 286 NCLITGRIPEYIEDMTDLKILDLSFNQLTG--PVPGILQNLKKIDYIFLTNNSLSGTLPDWI---LTSEKNLDLSYNNFT 360 (764)
Q Consensus 286 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g--~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~---~~~l~~L~Ls~N~l~ 360 (764)
+|++++.+|..+..+++|++|++++|++++ .+|..+..+++|++|++++|++++.+|... .+.++.|++++|+++
T Consensus 333 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~ 412 (520)
T 2z7x_B 333 NNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILT 412 (520)
T ss_dssp SSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCC
T ss_pred CCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCC
Confidence 666666666666666666666666666664 344556666666666666666665455432 244556666666666
Q ss_pred CCCCc
Q 004275 361 ESSPA 365 (764)
Q Consensus 361 ~~~p~ 365 (764)
+..|.
T Consensus 413 ~~~~~ 417 (520)
T 2z7x_B 413 DTIFR 417 (520)
T ss_dssp GGGGG
T ss_pred cchhh
Confidence 55443
No 16
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.97 E-value=6.5e-31 Score=297.37 Aligned_cols=279 Identities=21% Similarity=0.200 Sum_probs=255.2
Q ss_pred eeeEEEEEcCCCcccccCCccCCCCCCCCEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEE
Q 004275 84 VCHVTVILLKGFNLAGVIPEEFGNLTFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELV 163 (764)
Q Consensus 84 ~~~v~~L~L~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 163 (764)
..+++.|+|++|.+.+..|..|.++++|++|+|++|.++...+..|.++++|++|+|++|.+.+..|..|..+++|++|+
T Consensus 55 l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 134 (477)
T 2id5_A 55 FPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLE 134 (477)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEE
Confidence 35799999999999999999999999999999999999976667789999999999999999999999999999999999
Q ss_pred eeCCcCCCCCCccCCCCCCCcEEEccCccCCCCCcccccCCCCCcEEEccCccCCCcCcccccCCCCCCEEeeeCCcCCC
Q 004275 164 LEDNQLVGPLPENLGNLKSLRRILLSSNNFTGSIPESYGNLKNLTEFRIDGSNLTGRIPNFIGNWTKLDRLDLQGTSLEG 243 (764)
Q Consensus 164 Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 243 (764)
|++|.+.+..|..|.++++|++|+|++|++++..+..+.++++|+.|++++|.+.+..+..+..+++|+.|++++|.+.+
T Consensus 135 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~ 214 (477)
T 2id5_A 135 VGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLD 214 (477)
T ss_dssp ECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCC
T ss_pred CCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCcccc
Confidence 99999998888899999999999999999998777889999999999999999998888899999999999999999888
Q ss_pred CCccchhcCCCCCEEEcCCCCCCCCCCCCccCCccccccccccccccccCCccccCCCCCCEEeccCCCCCCCccccccC
Q 004275 244 PIPSTISQLKNLTELRISDLKGSSSSFPNLQDMKKMERLILRNCLITGRIPEYIEDMTDLKILDLSFNQLTGPVPGILQN 323 (764)
Q Consensus 244 ~~p~~l~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ 323 (764)
.+|.......+|+.|++++|++.......+..+++|+.|+|++|.+++..+..+..+++|+.|++++|++++..|..+..
T Consensus 215 ~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 294 (477)
T 2id5_A 215 TMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRG 294 (477)
T ss_dssp EECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTT
T ss_pred ccCcccccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcC
Confidence 88887777789999999998766433234888999999999999999888888999999999999999999988999999
Q ss_pred CCCCCEEeccCCcCcCCCChhh--hcCCCeEEeecCcCCCC
Q 004275 324 LKKIDYIFLTNNSLSGTLPDWI--LTSEKNLDLSYNNFTES 362 (764)
Q Consensus 324 l~~L~~L~L~~N~l~g~~p~~~--~~~l~~L~Ls~N~l~~~ 362 (764)
+++|+.|++++|++++..+..+ .+.++.|+|++|++++.
T Consensus 295 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~ 335 (477)
T 2id5_A 295 LNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACD 335 (477)
T ss_dssp CTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEECS
T ss_pred cccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccCc
Confidence 9999999999999997666555 46789999999998764
No 17
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.97 E-value=9.7e-31 Score=305.02 Aligned_cols=138 Identities=23% Similarity=0.297 Sum_probs=112.2
Q ss_pred eeEEEEEcCCCcccccCCccCCCCCCCCEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEe
Q 004275 85 CHVTVILLKGFNLAGVIPEEFGNLTFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVL 164 (764)
Q Consensus 85 ~~v~~L~L~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 164 (764)
.+++.|+|++|.+.+..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|.+++..|..|+++++|++|+|
T Consensus 32 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 111 (606)
T 3vq2_A 32 SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVA 111 (606)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEEC
T ss_pred CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEc
Confidence 46888888888888877778888888888888888888777888888888888888888888777888888888888888
Q ss_pred eCCcCCCCCCccCCCCCCCcEEEccCccCCC-CCcccccCCCCCcEEEccCccCCCcCc
Q 004275 165 EDNQLVGPLPENLGNLKSLRRILLSSNNFTG-SIPESYGNLKNLTEFRIDGSNLTGRIP 222 (764)
Q Consensus 165 s~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~L~~n~l~~~~p 222 (764)
++|.+++..|..++++++|++|++++|.+++ .+|..++++++|++|++++|++++..|
T Consensus 112 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~ 170 (606)
T 3vq2_A 112 VETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITV 170 (606)
T ss_dssp TTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECT
T ss_pred cCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecCh
Confidence 8888887666778888888888888888875 567888888888888888777665433
No 18
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.97 E-value=1.8e-30 Score=299.98 Aligned_cols=274 Identities=20% Similarity=0.213 Sum_probs=189.2
Q ss_pred eeEEEEEcCCCcccccCCccCCCCCCCCEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEe
Q 004275 85 CHVTVILLKGFNLAGVIPEEFGNLTFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVL 164 (764)
Q Consensus 85 ~~v~~L~L~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 164 (764)
.+++.|+|++|.+.+..|..|..+++|++|+|++|.+++..|..|..+++|++|+|++|+++ .+|.. .+++|++|+|
T Consensus 52 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L 128 (562)
T 3a79_B 52 PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMASLRHLDL 128 (562)
T ss_dssp TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CCTTCSEEEC
T ss_pred CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--ccccCCEEEC
Confidence 46899999999999888889999999999999999999888999999999999999999998 67776 8999999999
Q ss_pred eCCcCCC-CCCccCCCCCCCcEEEccCccCCCCCcccccCCCCC--cEEEccCccC--CCcCcccccCCC----------
Q 004275 165 EDNQLVG-PLPENLGNLKSLRRILLSSNNFTGSIPESYGNLKNL--TEFRIDGSNL--TGRIPNFIGNWT---------- 229 (764)
Q Consensus 165 s~N~l~~-~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L--~~L~L~~n~l--~~~~p~~~~~l~---------- 229 (764)
++|++++ .+|..|+++++|++|++++|++++. .+..+++| ++|++++|.+ ++..|..+..+.
T Consensus 129 s~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l~l~l~~ 205 (562)
T 3a79_B 129 SFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVLHLVFHP 205 (562)
T ss_dssp CSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECCEEEEEEEECS
T ss_pred CCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeecccccccccCcccccccCcceEEEEecC
Confidence 9999986 4568899999999999999998753 34555555 8888888888 666665555433
Q ss_pred -----------------------------------------------------------------------CCCEEeeeC
Q 004275 230 -----------------------------------------------------------------------KLDRLDLQG 238 (764)
Q Consensus 230 -----------------------------------------------------------------------~L~~L~L~~ 238 (764)
+|++|++++
T Consensus 206 n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~~~~~L~~L~l~~ 285 (562)
T 3a79_B 206 NSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNIYN 285 (562)
T ss_dssp SSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHHTTSSEEEEEEEE
T ss_pred ccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcCcHHHHHHHHHhhhcccccEEEEec
Confidence 677777777
Q ss_pred CcCCCCCccch-----------------------------------------------------hcCCCCCEEEcCCCCC
Q 004275 239 TSLEGPIPSTI-----------------------------------------------------SQLKNLTELRISDLKG 265 (764)
Q Consensus 239 N~l~~~~p~~l-----------------------------------------------------~~l~~L~~L~L~~n~~ 265 (764)
|.++|.+|..+ ..+++|++|++++|.+
T Consensus 286 n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~l~~L~~L~l~~n~l 365 (562)
T 3a79_B 286 LTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMVCPPSPSSFTFLNFTQNVF 365 (562)
T ss_dssp EEECSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCEEECCSSCC
T ss_pred cEeeccccchhhhcccccchheehhhcccceeecChhhhhhhhccCcceEEEccCCCcccccCccCCCCceEEECCCCcc
Confidence 77777777655 3444555555555443
Q ss_pred CCCCCCCccCCccccccccccccccc--cCCccccCCCCCCEEeccCCCCCCCccc-cccCCCCCCEEeccCCcCcCCCC
Q 004275 266 SSSSFPNLQDMKKMERLILRNCLITG--RIPEYIEDMTDLKILDLSFNQLTGPVPG-ILQNLKKIDYIFLTNNSLSGTLP 342 (764)
Q Consensus 266 ~~~~~~~l~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~g~~p~-~~~~l~~L~~L~L~~N~l~g~~p 342 (764)
.......+..+++|++|++++|++++ .+|..+..+++|++|++++|++++.+|. .+..+++|++|++++|++++.+|
T Consensus 366 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 445 (562)
T 3a79_B 366 TDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVF 445 (562)
T ss_dssp CTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGG
T ss_pred ccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchh
Confidence 33233334555555555555555554 1233455555555555555555543332 34555555555555555555554
Q ss_pred hhhhcCCCeEEeecCcCCCCCC
Q 004275 343 DWILTSEKNLDLSYNNFTESSP 364 (764)
Q Consensus 343 ~~~~~~l~~L~Ls~N~l~~~~p 364 (764)
..+.+.++.||+++|+++..++
T Consensus 446 ~~l~~~L~~L~L~~N~l~~ip~ 467 (562)
T 3a79_B 446 RCLPPKVKVLDLHNNRIMSIPK 467 (562)
T ss_dssp SSCCTTCSEEECCSSCCCCCCT
T ss_pred hhhcCcCCEEECCCCcCcccCh
Confidence 4444455555555555554333
No 19
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.97 E-value=3.1e-31 Score=284.73 Aligned_cols=278 Identities=21% Similarity=0.277 Sum_probs=184.5
Q ss_pred CChhHHHHHHHHHHhcC-C-----CCC----CCCCCCCCCCCCcccccCCCCCceeccCCC---CCCceeeEEEEEcCCC
Q 004275 29 LPDDEVQTLQSIFRKLN-F-----RNG----QVNQTSCTEGSWNVTIDDSNGSNFTCDCTY---SNNTVCHVTVILLKGF 95 (764)
Q Consensus 29 ~~~~e~~aL~~~~~~~~-~-----~~w----~~~~~~C~~~~~~~~~~~~~~~gv~C~~~~---~~~~~~~v~~L~L~~~ 95 (764)
.-.+|++||++||+.+. + ..| ....++|. |.|+.|+... ......+|+.|+|+++
T Consensus 24 ~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~------------~~g~~~~~~~~~l~~~~~~~l~~L~L~~n 91 (328)
T 4fcg_A 24 ALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIET------------RTGRALKATADLLEDATQPGRVALELRSV 91 (328)
T ss_dssp CCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCC------------SHHHHHHHHHHHHHHHTSTTCCEEEEESS
T ss_pred cCchHHHHHHHHHHhccCCchhhhhhhcccccccccccc------------cCCcchhhhHHHHhcccccceeEEEccCC
Confidence 44579999999999873 2 235 22345554 8899984200 0001235777777777
Q ss_pred cccccCCccCCCCCCCCEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEeeCCcCCCCCCc
Q 004275 96 NLAGVIPEEFGNLTFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVLEDNQLVGPLPE 175 (764)
Q Consensus 96 ~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 175 (764)
++. .+|+.++++++|++|+|++|.++ .+|..++++++|++|+|++|.++ .+|..++++++|++|+|++|++.+.+|.
T Consensus 92 ~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~ 168 (328)
T 4fcg_A 92 PLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPE 168 (328)
T ss_dssp CCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCS
T ss_pred Cch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccCh
Confidence 776 56777777777777777777777 67777777777777777777777 6677777777777777777777777776
Q ss_pred cCCCCCCCcEEEccCccCCCCCcccccCCCCCcEEEccCccCCCcCcccccCCCCCCEEeeeCCcCCCCCccchhcCCCC
Q 004275 176 NLGNLKSLRRILLSSNNFTGSIPESYGNLKNLTEFRIDGSNLTGRIPNFIGNWTKLDRLDLQGTSLEGPIPSTISQLKNL 255 (764)
Q Consensus 176 ~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L 255 (764)
.+... .++..+.++++|++|++++|.++ .+|..++.+++|++|++++|.+++ +|..+..+++|
T Consensus 169 ~~~~~---------------~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L 231 (328)
T 4fcg_A 169 PLAST---------------DASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKL 231 (328)
T ss_dssp CSEEE---------------C-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTC
T ss_pred hHhhc---------------cchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCC
Confidence 55430 01112333555555555555555 455555555555555555555553 33445555555
Q ss_pred CEEEcCCCCCCCCCCCCccCCccccccccccccccccCCccccCCCCCCEEeccCCCCCCCccccccCCCCCCEEeccCC
Q 004275 256 TELRISDLKGSSSSFPNLQDMKKMERLILRNCLITGRIPEYIEDMTDLKILDLSFNQLTGPVPGILQNLKKIDYIFLTNN 335 (764)
Q Consensus 256 ~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N 335 (764)
++|++++|+........+..+++|++|++++|.+.+.+|..+..+++|++|++++|++.+.+|..+.++++|+.+++..|
T Consensus 232 ~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~ 311 (328)
T 4fcg_A 232 EELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPH 311 (328)
T ss_dssp CEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGG
T ss_pred CEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHH
Confidence 55555554443333333556666777777777777788888888899999999999888899999999999999888877
Q ss_pred cCc
Q 004275 336 SLS 338 (764)
Q Consensus 336 ~l~ 338 (764)
.+.
T Consensus 312 ~~~ 314 (328)
T 4fcg_A 312 LQA 314 (328)
T ss_dssp GSC
T ss_pred HHH
Confidence 665
No 20
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.97 E-value=2.3e-30 Score=301.85 Aligned_cols=279 Identities=22% Similarity=0.262 Sum_probs=252.1
Q ss_pred eEEEEEcCCCcccccCCccCCCCCCCCEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEee
Q 004275 86 HVTVILLKGFNLAGVIPEEFGNLTFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVLE 165 (764)
Q Consensus 86 ~v~~L~L~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls 165 (764)
.++.|+++++.+.+..+..|..+++|++|+|++|.++ .+|..+..+++|++|++++|.+.+..|..+..+++|++|+++
T Consensus 255 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 333 (606)
T 3t6q_A 255 SVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIK 333 (606)
T ss_dssp EEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECC
T ss_pred ceeEEEeecCccCccCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECC
Confidence 6999999999999888888999999999999999998 789899999999999999999998888999999999999999
Q ss_pred CCcCCCCCCcc-CCCCCCCcEEEccCccCCCCC--cccccCCCCCcEEEccCccCCCcCcccccCCCCCCEEeeeCCcCC
Q 004275 166 DNQLVGPLPEN-LGNLKSLRRILLSSNNFTGSI--PESYGNLKNLTEFRIDGSNLTGRIPNFIGNWTKLDRLDLQGTSLE 242 (764)
Q Consensus 166 ~N~l~~~~p~~-l~~l~~L~~L~Ls~N~l~~~~--p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~ 242 (764)
+|.+.+.+|.. +.++++|++|++++|++++.. +..+..+++|++|++++|.+++..|..+..+++|++|++++|+++
T Consensus 334 ~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 413 (606)
T 3t6q_A 334 GNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLK 413 (606)
T ss_dssp SCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEE
T ss_pred CCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCC
Confidence 99998777665 899999999999999998765 778999999999999999999988999999999999999999998
Q ss_pred CCCccc-hhcCCCCCEEEcCCCCCCCCCCCCccCCcccccccccccccccc---CCccccCCCCCCEEeccCCCCCCCcc
Q 004275 243 GPIPST-ISQLKNLTELRISDLKGSSSSFPNLQDMKKMERLILRNCLITGR---IPEYIEDMTDLKILDLSFNQLTGPVP 318 (764)
Q Consensus 243 ~~~p~~-l~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~---~p~~~~~l~~L~~L~Ls~N~l~g~~p 318 (764)
+..|.. +..+++|+.|++++|.........+..+++|++|++++|.+++. .+..+..+++|++|++++|++++..|
T Consensus 414 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~ 493 (606)
T 3t6q_A 414 VKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQ 493 (606)
T ss_dssp CCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECT
T ss_pred CcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccCh
Confidence 876654 89999999999999776555555588899999999999999873 33568899999999999999998889
Q ss_pred ccccCCCCCCEEeccCCcCcCCCChhh--hcCCCeEEeecCcCCCCCCcc
Q 004275 319 GILQNLKKIDYIFLTNNSLSGTLPDWI--LTSEKNLDLSYNNFTESSPAT 366 (764)
Q Consensus 319 ~~~~~l~~L~~L~L~~N~l~g~~p~~~--~~~l~~L~Ls~N~l~~~~p~~ 366 (764)
..+..+++|+.|++++|++++..|..+ .+.+ .|++++|++++.+|..
T Consensus 494 ~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~ 542 (606)
T 3t6q_A 494 HAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSL 542 (606)
T ss_dssp TTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGG
T ss_pred hhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhh
Confidence 999999999999999999999888877 4556 9999999999988875
No 21
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.97 E-value=3.1e-30 Score=311.85 Aligned_cols=274 Identities=22% Similarity=0.214 Sum_probs=202.8
Q ss_pred eeeEEEEEcCCCcccccC-CccCCCCCCCCEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCcC--cCCCCCCC
Q 004275 84 VCHVTVILLKGFNLAGVI-PEEFGNLTFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLE--IGDISTLE 160 (764)
Q Consensus 84 ~~~v~~L~L~~~~l~g~~-p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~--~~~l~~L~ 160 (764)
..+++.|+|++|+..+.+ |..|.++++|++|+|++|.+.+..|..|+.+++|++|+|++|.+++.+|.. |+++++|+
T Consensus 47 l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~ 126 (844)
T 3j0a_A 47 LEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALT 126 (844)
T ss_dssp CCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCC
T ss_pred cccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCC
Confidence 346778888887666665 567788888888888888888777888888888888888888887766655 77888888
Q ss_pred EEEeeCCcCCCCCC-ccCCCCCCCcEEEccCccCCCCCcccccCC--CC------------------------------C
Q 004275 161 ELVLEDNQLVGPLP-ENLGNLKSLRRILLSSNNFTGSIPESYGNL--KN------------------------------L 207 (764)
Q Consensus 161 ~L~Ls~N~l~~~~p-~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l--~~------------------------------L 207 (764)
+|+|++|.+++..+ ..|+++++|++|+|++|.+++..+..+..+ ++ |
T Consensus 127 ~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L 206 (844)
T 3j0a_A 127 RLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVL 206 (844)
T ss_dssp EEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCB
T ss_pred EEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEECCCCccccccccchhhcCCccccCce
Confidence 88888888876554 467788888888888887776666555443 33 5
Q ss_pred cEEEccCccCCCcCcccccC--------------------------------------CCCCCEEeeeCCcCCCCCccch
Q 004275 208 TEFRIDGSNLTGRIPNFIGN--------------------------------------WTKLDRLDLQGTSLEGPIPSTI 249 (764)
Q Consensus 208 ~~L~L~~n~l~~~~p~~~~~--------------------------------------l~~L~~L~L~~N~l~~~~p~~l 249 (764)
+.|++++|.+++.++..+.. .++|+.|++++|.+.+..|..+
T Consensus 207 ~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~ 286 (844)
T 3j0a_A 207 EILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVF 286 (844)
T ss_dssp SEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCS
T ss_pred eEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChhhhhccccCCccEEECCCCcccccChhhh
Confidence 55666655554444332221 1567778888888877777888
Q ss_pred hcCCCCCEEEcCCCCCCCCCCCCccCCccccccccccccccccCCccccCCCCCCEEeccCCCCCCCccccccCCCCCCE
Q 004275 250 SQLKNLTELRISDLKGSSSSFPNLQDMKKMERLILRNCLITGRIPEYIEDMTDLKILDLSFNQLTGPVPGILQNLKKIDY 329 (764)
Q Consensus 250 ~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~ 329 (764)
..+++|+.|++++|++.......+..+++|++|++++|.+++..|..+..+++|++|++++|++++..+..+..+++|++
T Consensus 287 ~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~ 366 (844)
T 3j0a_A 287 ETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQT 366 (844)
T ss_dssp SSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCE
T ss_pred hcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCE
Confidence 88999999999987766555556888899999999999999888888999999999999999998888888889999999
Q ss_pred EeccCCcCcCCCChhhhcCCCeEEeecCcCC
Q 004275 330 IFLTNNSLSGTLPDWILTSEKNLDLSYNNFT 360 (764)
Q Consensus 330 L~L~~N~l~g~~p~~~~~~l~~L~Ls~N~l~ 360 (764)
|++++|.+++. +. .+.++.|++++|+++
T Consensus 367 L~Ls~N~l~~i-~~--~~~L~~L~l~~N~l~ 394 (844)
T 3j0a_A 367 LDLRDNALTTI-HF--IPSIPDIFLSGNKLV 394 (844)
T ss_dssp EEEETCCSCCC-SS--CCSCSEEEEESCCCC
T ss_pred EECCCCCCCcc-cC--CCCcchhccCCCCcc
Confidence 99999988753 21 233344444444444
No 22
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.97 E-value=3.5e-30 Score=300.35 Aligned_cols=300 Identities=20% Similarity=0.210 Sum_probs=210.4
Q ss_pred eeeEEEEEcCCCcccccCCccCCCCCCCCEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEE
Q 004275 84 VCHVTVILLKGFNLAGVIPEEFGNLTFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELV 163 (764)
Q Consensus 84 ~~~v~~L~L~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 163 (764)
..+++.|+|++|.+.+..|..|.++++|++|+|++|.+++..|..|+++++|++|+|++|.+++..|..++++++|++|+
T Consensus 55 l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 134 (606)
T 3vq2_A 55 FSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLN 134 (606)
T ss_dssp CTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEE
T ss_pred CccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEe
Confidence 34688888888888888888888888899999988888887788888888899999888888877777888888888888
Q ss_pred eeCCcCCC-CCCccCCCCCCCcEEEccCccCCCCCcccccCC--------------------------------------
Q 004275 164 LEDNQLVG-PLPENLGNLKSLRRILLSSNNFTGSIPESYGNL-------------------------------------- 204 (764)
Q Consensus 164 Ls~N~l~~-~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l-------------------------------------- 204 (764)
|++|.+.+ .+|..++++++|++|++++|++++..|..++.+
T Consensus 135 L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~n 214 (606)
T 3vq2_A 135 VAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGIKLHELTLRGN 214 (606)
T ss_dssp CCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESC
T ss_pred CCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccCCCcceeCcccccCceeeeeeccCC
Confidence 88888875 568888888888888888888765544332221
Q ss_pred --------------------------------------------------------------------------------
Q 004275 205 -------------------------------------------------------------------------------- 204 (764)
Q Consensus 205 -------------------------------------------------------------------------------- 204 (764)
T Consensus 215 ~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~l~~L~~L~l~~ 294 (606)
T 3vq2_A 215 FNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVKFHCLANVSAMSLAG 294 (606)
T ss_dssp CSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECCCTTCCGGGGSCGGGTTCSEEEEES
T ss_pred ccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheeccccccccccccccccCCCCCEEEecC
Confidence
Q ss_pred ------------CCCcEEEccCccCCCcCcc--------------------cccCCCCCCEEeeeCCcCCCC--Cccchh
Q 004275 205 ------------KNLTEFRIDGSNLTGRIPN--------------------FIGNWTKLDRLDLQGTSLEGP--IPSTIS 250 (764)
Q Consensus 205 ------------~~L~~L~L~~n~l~~~~p~--------------------~~~~l~~L~~L~L~~N~l~~~--~p~~l~ 250 (764)
++|++|++++|.+ +.+|. .+..+++|++|++++|.+++. +|..+.
T Consensus 295 ~~~~~l~~l~~~~~L~~L~l~~n~l-~~lp~~~l~~L~~L~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~ 373 (606)
T 3vq2_A 295 VSIKYLEDVPKHFKWQSLSIIRCQL-KQFPTLDLPFLKSLTLTMNKGSISFKKVALPSLSYLDLSRNALSFSGCCSYSDL 373 (606)
T ss_dssp CCCCCCCCCCTTCCCSEEEEESCCC-SSCCCCCCSSCCEEEEESCSSCEECCCCCCTTCCEEECCSSCEEEEEECCHHHH
T ss_pred ccchhhhhccccccCCEEEcccccC-cccccCCCCccceeeccCCcCccchhhccCCCCCEEECcCCccCCCcchhhhhc
Confidence 2233333333333 22221 233556777777777887755 367788
Q ss_pred cCCCCCEEEcCCCCCCCCCCCCccCCccccccccccccccccCC-ccccCCCCCCEEeccCCCCCCCccccccCCCCCCE
Q 004275 251 QLKNLTELRISDLKGSSSSFPNLQDMKKMERLILRNCLITGRIP-EYIEDMTDLKILDLSFNQLTGPVPGILQNLKKIDY 329 (764)
Q Consensus 251 ~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~ 329 (764)
.+++|++|++++|...... +.+..+++|+.|++++|++++..| ..+..+++|++|++++|++++..|..+..+++|++
T Consensus 374 ~~~~L~~L~L~~n~l~~~~-~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 452 (606)
T 3vq2_A 374 GTNSLRHLDLSFNGAIIMS-ANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNT 452 (606)
T ss_dssp CCSCCCEEECCSCSEEEEC-CCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCE
T ss_pred cCCcccEeECCCCccccch-hhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCE
Confidence 8888888888876544322 456677777777777777776666 56677777777777777777777777777777777
Q ss_pred EeccCCcCcCC-CChhh--hcCCCeEEeecCcCCCCCCcc---cccc-cceeeccccCCCCCc
Q 004275 330 IFLTNNSLSGT-LPDWI--LTSEKNLDLSYNNFTESSPAT---CRES-RVNILSSFSSTGSNS 385 (764)
Q Consensus 330 L~L~~N~l~g~-~p~~~--~~~l~~L~Ls~N~l~~~~p~~---~~~~-~l~~~~~~~~~~~~~ 385 (764)
|++++|++++. +|..+ .+.++.|++++|++++.+|.. +..+ .+++..|...+.+|.
T Consensus 453 L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 515 (606)
T 3vq2_A 453 LKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSS 515 (606)
T ss_dssp EECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGG
T ss_pred EECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHH
Confidence 77777777763 55544 355667777777777766654 2222 355555544443343
No 23
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.97 E-value=9.2e-30 Score=280.23 Aligned_cols=284 Identities=16% Similarity=0.124 Sum_probs=209.0
Q ss_pred eeEEEEEcCCCcccccCCccCCCCCCCCEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEe
Q 004275 85 CHVTVILLKGFNLAGVIPEEFGNLTFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVL 164 (764)
Q Consensus 85 ~~v~~L~L~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 164 (764)
.+++.++++++.+....+..+..+++|++|+|++|.+++..+..|..+++|++|+|++|.+++..|..|+++++|++|+|
T Consensus 45 ~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 124 (390)
T 3o6n_A 45 NNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVL 124 (390)
T ss_dssp CCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEEC
Confidence 46888999988877655555788999999999999998877788999999999999999999888888999999999999
Q ss_pred eCCcCCCCCCccCCCCCCCcEEEccCccCCCCCcccccCCCCCcEEEccCccCCCcCcccccCCCCCCEEeeeCCcCCCC
Q 004275 165 EDNQLVGPLPENLGNLKSLRRILLSSNNFTGSIPESYGNLKNLTEFRIDGSNLTGRIPNFIGNWTKLDRLDLQGTSLEGP 244 (764)
Q Consensus 165 s~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 244 (764)
++|+++...+..|.++++|++|++++|++++..|..+..+++|++|++++|.+++.. +..+++|+.|++++|.+++.
T Consensus 125 ~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~---~~~l~~L~~L~l~~n~l~~~ 201 (390)
T 3o6n_A 125 ERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLSTL 201 (390)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCC---GGGCTTCSEEECCSSCCSEE
T ss_pred CCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCccc---cccccccceeeccccccccc
Confidence 999998544445688999999999999999888888999999999999999988642 44455666666655555431
Q ss_pred ------------------CccchhcCCCCCEEEcCCCCCCCCCCCCccCCccccccccccccccccCCccccCCCCCCEE
Q 004275 245 ------------------IPSTISQLKNLTELRISDLKGSSSSFPNLQDMKKMERLILRNCLITGRIPEYIEDMTDLKIL 306 (764)
Q Consensus 245 ------------------~p~~l~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 306 (764)
+|. ...++|+.|++++|.+.. .+.+..+++|++|++++|.+++..|..+..+++|++|
T Consensus 202 ~~~~~L~~L~l~~n~l~~~~~--~~~~~L~~L~l~~n~l~~--~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 277 (390)
T 3o6n_A 202 AIPIAVEELDASHNSINVVRG--PVNVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERL 277 (390)
T ss_dssp ECCSSCSEEECCSSCCCEEEC--CCCSSCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEE
T ss_pred CCCCcceEEECCCCeeeeccc--cccccccEEECCCCCCcc--cHHHcCCCCccEEECCCCcCCCcChhHccccccCCEE
Confidence 111 123466666666655443 2456677777777777777777777777777777777
Q ss_pred eccCCCCCCCccccccCCCCCCEEeccCCcCcCCCChhh--hcCCCeEEeecCcCCCCCCcccccc-cceeecc
Q 004275 307 DLSFNQLTGPVPGILQNLKKIDYIFLTNNSLSGTLPDWI--LTSEKNLDLSYNNFTESSPATCRES-RVNILSS 377 (764)
Q Consensus 307 ~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~--~~~l~~L~Ls~N~l~~~~p~~~~~~-~l~~~~~ 377 (764)
++++|++++ +|..+..+++|+.|++++|+++ .+|..+ .+.++.|++++|+++..+...+..+ .+++..|
T Consensus 278 ~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~L~~L~l~~N 349 (390)
T 3o6n_A 278 YISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLKLSTHHTLKNLTLSHN 349 (390)
T ss_dssp ECCSSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCCCCTTCCCSEEECCSS
T ss_pred ECCCCcCcc-cCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEECCCCccceeCchhhccCCEEEcCCC
Confidence 777777774 5555666777777777777777 344444 4667777777777776654444433 3444443
No 24
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.97 E-value=1.4e-29 Score=294.37 Aligned_cols=284 Identities=16% Similarity=0.129 Sum_probs=218.7
Q ss_pred eeEEEEEcCCCcccccCCccCCCCCCCCEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEe
Q 004275 85 CHVTVILLKGFNLAGVIPEEFGNLTFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVL 164 (764)
Q Consensus 85 ~~v~~L~L~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 164 (764)
.+++.++++++.+....+..+..+++|++|+|++|.+++..|..|+.+++|++|+|++|.+++..|..|+.+++|++|+|
T Consensus 51 ~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 130 (597)
T 3oja_B 51 NNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVL 130 (597)
T ss_dssp CCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEe
Confidence 45788888888887766666788999999999999999888888999999999999999999888888899999999999
Q ss_pred eCCcCCCCCCccCCCCCCCcEEEccCccCCCCCcccccCCCCCcEEEccCccCCCcCcccccCCCCCCEEeeeCCcCCCC
Q 004275 165 EDNQLVGPLPENLGNLKSLRRILLSSNNFTGSIPESYGNLKNLTEFRIDGSNLTGRIPNFIGNWTKLDRLDLQGTSLEGP 244 (764)
Q Consensus 165 s~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 244 (764)
++|.+++..+..|+++++|++|+|++|.+++..|..|..+++|++|++++|.+++.. ++.+++|+.|++++|.+++.
T Consensus 131 ~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~---~~~l~~L~~L~l~~n~l~~l 207 (597)
T 3oja_B 131 ERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLSTL 207 (597)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC---GGGCTTCSEEECCSSCCSEE
T ss_pred eCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC---hhhhhhhhhhhcccCccccc
Confidence 999998665556789999999999999999888888999999999999999988653 34455666666666555431
Q ss_pred ------------------CccchhcCCCCCEEEcCCCCCCCCCCCCccCCccccccccccccccccCCccccCCCCCCEE
Q 004275 245 ------------------IPSTISQLKNLTELRISDLKGSSSSFPNLQDMKKMERLILRNCLITGRIPEYIEDMTDLKIL 306 (764)
Q Consensus 245 ------------------~p~~l~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 306 (764)
+|..+ .++|+.|++++|.+.. .+.+..+++|+.|+|++|.+++.+|..+..+++|+.|
T Consensus 208 ~~~~~L~~L~ls~n~l~~~~~~~--~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 283 (597)
T 3oja_B 208 AIPIAVEELDASHNSINVVRGPV--NVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERL 283 (597)
T ss_dssp ECCTTCSEEECCSSCCCEEECSC--CSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEE
T ss_pred cCCchhheeeccCCccccccccc--CCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEE
Confidence 11111 2467777777755443 3557778888888888888888888888888888888
Q ss_pred eccCCCCCCCccccccCCCCCCEEeccCCcCcCCCChhh--hcCCCeEEeecCcCCCCCCcccccc-cceeecc
Q 004275 307 DLSFNQLTGPVPGILQNLKKIDYIFLTNNSLSGTLPDWI--LTSEKNLDLSYNNFTESSPATCRES-RVNILSS 377 (764)
Q Consensus 307 ~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~--~~~l~~L~Ls~N~l~~~~p~~~~~~-~l~~~~~ 377 (764)
+|++|++++ +|..+..+++|+.|+|++|.++ .+|..+ ++.++.|+|++|++++.++..+..+ .+++..|
T Consensus 284 ~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~l~~N 355 (597)
T 3oja_B 284 YISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLKLSTHHTLKNLTLSHN 355 (597)
T ss_dssp ECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCCCCTTCCCSEEECCSS
T ss_pred ECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCcChhhcCCCCEEEeeCC
Confidence 888888875 5666677888888888888888 466555 5677888888888887765555544 3555554
No 25
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.97 E-value=2.9e-29 Score=296.57 Aligned_cols=282 Identities=18% Similarity=0.203 Sum_probs=238.8
Q ss_pred eeEEEEEcCCCcccccCCccCCCCCCCCEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEe
Q 004275 85 CHVTVILLKGFNLAGVIPEEFGNLTFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVL 164 (764)
Q Consensus 85 ~~v~~L~L~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 164 (764)
.+++.|+|++|++.+..+..|.++++|++|||++|.+++..|..|+++++|++|+|++|.+++..+..|+++++|++|+|
T Consensus 25 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 104 (680)
T 1ziw_A 25 TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHL 104 (680)
T ss_dssp TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEEC
T ss_pred CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEEC
Confidence 47999999999999888888999999999999999999999999999999999999999999655567999999999999
Q ss_pred eCCcCCCCCCccCCCCCCCcEEEccCccCCCCCcccccCCCCCcEEEccCccCCCcCccccc--CCCCCCEEeeeCCcCC
Q 004275 165 EDNQLVGPLPENLGNLKSLRRILLSSNNFTGSIPESYGNLKNLTEFRIDGSNLTGRIPNFIG--NWTKLDRLDLQGTSLE 242 (764)
Q Consensus 165 s~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~--~l~~L~~L~L~~N~l~ 242 (764)
++|++++..|..|+++++|++|+|++|.+++..|..+.++++|++|++++|.+++..+..+. .+++|++|++++|.++
T Consensus 105 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~ 184 (680)
T 1ziw_A 105 MSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIK 184 (680)
T ss_dssp CSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCCC
T ss_pred CCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCccc
Confidence 99999987778899999999999999999998899999999999999999999988777654 5689999999999999
Q ss_pred CCCccchhcCC---------------------------CCCEEEcCCCCCCCCCCCCccCCcc--ccccccccccccccC
Q 004275 243 GPIPSTISQLK---------------------------NLTELRISDLKGSSSSFPNLQDMKK--MERLILRNCLITGRI 293 (764)
Q Consensus 243 ~~~p~~l~~l~---------------------------~L~~L~L~~n~~~~~~~~~l~~l~~--L~~L~Ls~N~l~~~~ 293 (764)
+..|..+..++ +|+.|++++|.........+..++. |+.|++++|++++..
T Consensus 185 ~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~ 264 (680)
T 1ziw_A 185 EFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVG 264 (680)
T ss_dssp CBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEEC
T ss_pred ccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCccC
Confidence 88888777654 4566666665444333334666654 999999999999888
Q ss_pred CccccCCCCCCEEeccCCCCCCCccccccCCCCCCEEeccCCcCcCC-----CCh----hh--hcCCCeEEeecCcCCCC
Q 004275 294 PEYIEDMTDLKILDLSFNQLTGPVPGILQNLKKIDYIFLTNNSLSGT-----LPD----WI--LTSEKNLDLSYNNFTES 362 (764)
Q Consensus 294 p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~-----~p~----~~--~~~l~~L~Ls~N~l~~~ 362 (764)
|..+..+++|++|++++|++++..|..+..+++|++|++++|...+. +|. .+ .+.++.|++++|++++.
T Consensus 265 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~ 344 (680)
T 1ziw_A 265 NDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGI 344 (680)
T ss_dssp TTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCCC
T ss_pred cccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccCCC
Confidence 88899999999999999999988888888888999999888766543 332 22 45677899999998887
Q ss_pred CCcc
Q 004275 363 SPAT 366 (764)
Q Consensus 363 ~p~~ 366 (764)
+|..
T Consensus 345 ~~~~ 348 (680)
T 1ziw_A 345 KSNM 348 (680)
T ss_dssp CTTT
T ss_pred ChhH
Confidence 7654
No 26
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.97 E-value=1.4e-29 Score=292.94 Aligned_cols=133 Identities=23% Similarity=0.305 Sum_probs=78.6
Q ss_pred eEEEEEcCCCcccccCCccCCCCCCCCEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEee
Q 004275 86 HVTVILLKGFNLAGVIPEEFGNLTFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVLE 165 (764)
Q Consensus 86 ~v~~L~L~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls 165 (764)
+++.|+|++|++.+..+..|..+++|++|||++|.+++..|..|.++++|++|+|++|.+++..|..|+.+++|++|+++
T Consensus 29 ~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 108 (570)
T 2z63_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (570)
T ss_dssp SCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred cccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCcccccccccc
Confidence 45666666666665555566666666666666666665555556666666666666666665555556666666666666
Q ss_pred CCcCCCCCCccCCCCCCCcEEEccCccCCC-CCcccccCCCCCcEEEccCccCC
Q 004275 166 DNQLVGPLPENLGNLKSLRRILLSSNNFTG-SIPESYGNLKNLTEFRIDGSNLT 218 (764)
Q Consensus 166 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~L~~n~l~ 218 (764)
+|++++..+..++++++|++|++++|.+++ .+|..++++++|++|++++|.++
T Consensus 109 ~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~ 162 (570)
T 2z63_A 109 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQ 162 (570)
T ss_dssp TSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCC
T ss_pred ccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccc
Confidence 666554443345556666666666665554 34555555555555555555443
No 27
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.97 E-value=1.8e-29 Score=288.67 Aligned_cols=285 Identities=20% Similarity=0.226 Sum_probs=222.0
Q ss_pred EEEEcCCCcccccCCccCCCCCCCCEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEeeCC
Q 004275 88 TVILLKGFNLAGVIPEEFGNLTFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVLEDN 167 (764)
Q Consensus 88 ~~L~L~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N 167 (764)
+.+++++++++ .+|..+. ++|++|+|++|.+++..|..|.++++|++|+|++|++++..|..|+++++|++|+|++|
T Consensus 3 ~~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 79 (520)
T 2z7x_B 3 FLVDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHN 79 (520)
T ss_dssp CEEECTTSCCS-SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSS
T ss_pred ceEecCCCCcc-ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCC
Confidence 46899999998 5777776 89999999999999888899999999999999999999888999999999999999999
Q ss_pred cCCCCCCccCCCCCCCcEEEccCccCCC-CCcccccCCCCCcEEEccCccCCCcCcccccCCCCC--CEEeeeCCcC--C
Q 004275 168 QLVGPLPENLGNLKSLRRILLSSNNFTG-SIPESYGNLKNLTEFRIDGSNLTGRIPNFIGNWTKL--DRLDLQGTSL--E 242 (764)
Q Consensus 168 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L--~~L~L~~N~l--~ 242 (764)
+++ .+|.. .+++|++|+|++|++++ .+|..++++++|++|++++|.+++ ..+..+++| +.|++++|.+ .
T Consensus 80 ~l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~ 153 (520)
T 2z7x_B 80 KLV-KISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGE 153 (520)
T ss_dssp CCC-EEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTS
T ss_pred cee-ecCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeeccccccc
Confidence 998 57766 89999999999999987 578999999999999999999986 456777788 9999999999 6
Q ss_pred CCCccchhcCC---------------------------------------------------------------------
Q 004275 243 GPIPSTISQLK--------------------------------------------------------------------- 253 (764)
Q Consensus 243 ~~~p~~l~~l~--------------------------------------------------------------------- 253 (764)
+..|..+..+.
T Consensus 154 ~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l~ 233 (520)
T 2z7x_B 154 KEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETT 233 (520)
T ss_dssp SCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEEEE
T ss_pred ccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchhhhccccchhhccccccccC
Confidence 67776665533
Q ss_pred --------------CCCEEEcCCCCCCCCCCCC-c-----cCCccccccccccccccccCCc------------------
Q 004275 254 --------------NLTELRISDLKGSSSSFPN-L-----QDMKKMERLILRNCLITGRIPE------------------ 295 (764)
Q Consensus 254 --------------~L~~L~L~~n~~~~~~~~~-l-----~~l~~L~~L~Ls~N~l~~~~p~------------------ 295 (764)
+|++|++++|++. +.+|. + ..+++|+.+++++|.+ .+|.
T Consensus 234 ~~~~~~~~~~~~~~~L~~L~l~~n~l~-~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~ 310 (520)
T 2z7x_B 234 WNSFIRILQLVWHTTVWYFSISNVKLQ-GQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVS 310 (520)
T ss_dssp HHHHHHHHHHHHTSSCSEEEEEEEEEE-SCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEE
T ss_pred HHHHHHHHHHhhhCcccEEEeeccccc-CccccchhhcccccCceeEeccccccce--ecchhhhhcccccCceeEEEcC
Confidence 3444444433221 12221 2 3444444444444443 1220
Q ss_pred -------c-ccCCCCCCEEeccCCCCCCCccccccCCCCCCEEeccCCcCcC--CCChhh--hcCCCeEEeecCcCCCCC
Q 004275 296 -------Y-IEDMTDLKILDLSFNQLTGPVPGILQNLKKIDYIFLTNNSLSG--TLPDWI--LTSEKNLDLSYNNFTESS 363 (764)
Q Consensus 296 -------~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g--~~p~~~--~~~l~~L~Ls~N~l~~~~ 363 (764)
. +..+++|++|++++|++++.+|..+..+++|++|++++|++++ .+|..+ .+.++.||+++|++++..
T Consensus 311 ~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l 390 (520)
T 2z7x_B 311 GTRMVHMLCPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDE 390 (520)
T ss_dssp SSCCCCCCCCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCG
T ss_pred CCccccccchhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCccc
Confidence 0 1678999999999999999999999999999999999999997 556655 567889999999999954
Q ss_pred Cc-ccc---cc-cceeeccccCCCCC
Q 004275 364 PA-TCR---ES-RVNILSSFSSTGSN 384 (764)
Q Consensus 364 p~-~~~---~~-~l~~~~~~~~~~~~ 384 (764)
|. .+. .+ .+++..|...+.+|
T Consensus 391 ~~~~~~~l~~L~~L~Ls~N~l~~~~~ 416 (520)
T 2z7x_B 391 KKGDCSWTKSLLSLNMSSNILTDTIF 416 (520)
T ss_dssp GGCSCCCCTTCCEEECCSSCCCGGGG
T ss_pred ccchhccCccCCEEECcCCCCCcchh
Confidence 43 333 22 46666665544333
No 28
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.96 E-value=8.5e-29 Score=285.93 Aligned_cols=157 Identities=20% Similarity=0.190 Sum_probs=138.0
Q ss_pred EEEEcCCCcccccCCccCCCCCCCCEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEeeCC
Q 004275 88 TVILLKGFNLAGVIPEEFGNLTFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVLEDN 167 (764)
Q Consensus 88 ~~L~L~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N 167 (764)
+.++++++++++ +|..+. ++|++|+|++|.+++..|..|.++++|++|+|++|++++..|..|+++++|++|+|++|
T Consensus 34 ~~l~ls~~~L~~-ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 110 (562)
T 3a79_B 34 SMVDYSNRNLTH-VPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHN 110 (562)
T ss_dssp CEEECTTSCCCS-CCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTS
T ss_pred cEEEcCCCCCcc-CCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCC
Confidence 789999999986 776664 89999999999999888899999999999999999999888999999999999999999
Q ss_pred cCCCCCCccCCCCCCCcEEEccCccCCC-CCcccccCCCCCcEEEccCccCCCcCcccccCCCCC--CEEeeeCCcC--C
Q 004275 168 QLVGPLPENLGNLKSLRRILLSSNNFTG-SIPESYGNLKNLTEFRIDGSNLTGRIPNFIGNWTKL--DRLDLQGTSL--E 242 (764)
Q Consensus 168 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L--~~L~L~~N~l--~ 242 (764)
+++ .+|.. .+++|++|+|++|++++ .+|..|+++++|++|++++|.+++. .+..+++| ++|++++|.+ +
T Consensus 111 ~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~~~ 184 (562)
T 3a79_B 111 RLQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYHIK 184 (562)
T ss_dssp CCC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCCCC
T ss_pred cCC-ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeeccccccc
Confidence 998 57766 89999999999999987 4578999999999999999999864 34555555 9999999999 7
Q ss_pred CCCccchhcCC
Q 004275 243 GPIPSTISQLK 253 (764)
Q Consensus 243 ~~~p~~l~~l~ 253 (764)
+..|..+..+.
T Consensus 185 ~~~~~~l~~l~ 195 (562)
T 3a79_B 185 GGETESLQIPN 195 (562)
T ss_dssp SSSCCEEEECC
T ss_pred ccCcccccccC
Confidence 77776666543
No 29
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.96 E-value=1.1e-28 Score=265.54 Aligned_cols=272 Identities=25% Similarity=0.362 Sum_probs=232.1
Q ss_pred eeEEEEEcCCCcccccCCccCCCCCCCCEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEe
Q 004275 85 CHVTVILLKGFNLAGVIPEEFGNLTFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVL 164 (764)
Q Consensus 85 ~~v~~L~L~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 164 (764)
++++.++++++++. .+|..+. ++|++|+|++|.+++..|..|.++++|++|+|++|.+++..|..|+.+++|++|+|
T Consensus 33 c~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 109 (332)
T 2ft3_A 33 CHLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYI 109 (332)
T ss_dssp EETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEEC
T ss_pred ccCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEEC
Confidence 35677888888876 5676664 68999999999999877889999999999999999999888999999999999999
Q ss_pred eCCcCCCCCCccCCCCCCCcEEEccCccCCCCCcccccCCCCCcEEEccCccCC--CcCcccccCCCCCCEEeeeCCcCC
Q 004275 165 EDNQLVGPLPENLGNLKSLRRILLSSNNFTGSIPESYGNLKNLTEFRIDGSNLT--GRIPNFIGNWTKLDRLDLQGTSLE 242 (764)
Q Consensus 165 s~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~--~~~p~~~~~l~~L~~L~L~~N~l~ 242 (764)
++|+++ .+|..+. ++|++|++++|++++..+..|..+++|++|++++|.++ +..|..+..+ +|+.|++++|+++
T Consensus 110 ~~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~ 185 (332)
T 2ft3_A 110 SKNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLT 185 (332)
T ss_dssp CSSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCS
T ss_pred CCCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCC
Confidence 999998 5666665 89999999999999777778999999999999999996 4677788888 9999999999998
Q ss_pred CCCccchhcCCCCCEEEcCCCCCCCCCCCCccCCccccccccccccccccCCccccCCCCCCEEeccCCCCCCCcccccc
Q 004275 243 GPIPSTISQLKNLTELRISDLKGSSSSFPNLQDMKKMERLILRNCLITGRIPEYIEDMTDLKILDLSFNQLTGPVPGILQ 322 (764)
Q Consensus 243 ~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~ 322 (764)
+ +|..+. ++|++|++++|.+.......+..+++|++|++++|++++..+..+..+++|++|++++|+++ .+|..+.
T Consensus 186 ~-l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~ 261 (332)
T 2ft3_A 186 G-IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLP 261 (332)
T ss_dssp S-CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGG
T ss_pred c-cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhh
Confidence 6 555544 78999999998776665567889999999999999999888888999999999999999999 7888899
Q ss_pred CCCCCCEEeccCCcCcCCCChhhh--------cCCCeEEeecCcCC--CCCCccc
Q 004275 323 NLKKIDYIFLTNNSLSGTLPDWIL--------TSEKNLDLSYNNFT--ESSPATC 367 (764)
Q Consensus 323 ~l~~L~~L~L~~N~l~g~~p~~~~--------~~l~~L~Ls~N~l~--~~~p~~~ 367 (764)
.+++|++|++++|++++..+..+. ..++.|++++|+++ +..|..+
T Consensus 262 ~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~ 316 (332)
T 2ft3_A 262 DLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATF 316 (332)
T ss_dssp GCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGG
T ss_pred cCccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCcccc
Confidence 999999999999999976655542 23568999999998 4555543
No 30
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.96 E-value=2e-28 Score=263.44 Aligned_cols=266 Identities=23% Similarity=0.295 Sum_probs=212.9
Q ss_pred eeEEEEEcCCCcccccCCccCCCCCCCCEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEe
Q 004275 85 CHVTVILLKGFNLAGVIPEEFGNLTFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVL 164 (764)
Q Consensus 85 ~~v~~L~L~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 164 (764)
.+++.|++++|++.+..|..|..+++|++|+|++|.+++..|..|+++++|++|+|++|.++ .+|..+. ++|++|++
T Consensus 54 ~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~--~~L~~L~l 130 (332)
T 2ft3_A 54 PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLP--SSLVELRI 130 (332)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCC-SCCSSCC--TTCCEEEC
T ss_pred CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCC-ccCcccc--ccCCEEEC
Confidence 36888999999888877888889999999999999998888888899999999999999888 6676665 78999999
Q ss_pred eCCcCCCCCCccCCCCCCCcEEEccCccCC--CCCcccccCCCCCcEEEccCccCCCcCcccccCCCCCCEEeeeCCcCC
Q 004275 165 EDNQLVGPLPENLGNLKSLRRILLSSNNFT--GSIPESYGNLKNLTEFRIDGSNLTGRIPNFIGNWTKLDRLDLQGTSLE 242 (764)
Q Consensus 165 s~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~--~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~ 242 (764)
++|++.+..+..|.++++|++|++++|.++ +..+..+..+ +|++|++++|.+++ +|..+. ++|++|++++|.++
T Consensus 131 ~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~i~ 206 (332)
T 2ft3_A 131 HDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG-IPKDLP--ETLNELHLDHNKIQ 206 (332)
T ss_dssp CSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-CCSSSC--SSCSCCBCCSSCCC
T ss_pred CCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc-cCcccc--CCCCEEECCCCcCC
Confidence 999988766667888999999999999885 3667778777 89999999998885 555544 68889999999998
Q ss_pred CCCccchhcCCCCCEEEcCCCCCCCCCCCCccCCccccccccccccccccCCccccCCCCCCEEeccCCCCCCCcccccc
Q 004275 243 GPIPSTISQLKNLTELRISDLKGSSSSFPNLQDMKKMERLILRNCLITGRIPEYIEDMTDLKILDLSFNQLTGPVPGILQ 322 (764)
Q Consensus 243 ~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~ 322 (764)
+..+..+..+++|+.|++++|.+.......+..+++|++|++++|+++ .+|..+..+++|++|++++|++++..+..+.
T Consensus 207 ~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~ 285 (332)
T 2ft3_A 207 AIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFC 285 (332)
T ss_dssp CCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSS
T ss_pred ccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHcc
Confidence 887788888999999999987665544445788889999999999988 7788888889999999999999877666665
Q ss_pred C------CCCCCEEeccCCcCc--CCCChhh--hcCCCeEEeecCc
Q 004275 323 N------LKKIDYIFLTNNSLS--GTLPDWI--LTSEKNLDLSYNN 358 (764)
Q Consensus 323 ~------l~~L~~L~L~~N~l~--g~~p~~~--~~~l~~L~Ls~N~ 358 (764)
. ...|+.|++++|++. +..|..+ .+.++.+++++|+
T Consensus 286 ~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 286 PVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp CSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred ccccccccccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 4 366888999999887 4455544 4456788888874
No 31
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.96 E-value=1.5e-28 Score=264.21 Aligned_cols=266 Identities=24% Similarity=0.329 Sum_probs=204.2
Q ss_pred eEEEEEcCCCcccccCCccCCCCCCCCEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEee
Q 004275 86 HVTVILLKGFNLAGVIPEEFGNLTFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVLE 165 (764)
Q Consensus 86 ~v~~L~L~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls 165 (764)
+++.++++++.+. .+|..+. +.|++|+|++|.+++..+..|.++++|++|+|++|.+++..|..|+.+++|++|+|+
T Consensus 32 ~l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 108 (330)
T 1xku_A 32 HLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLS 108 (330)
T ss_dssp ETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CCeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECC
Confidence 4566777777765 3555443 578888888888887666678888888888888888887778888888888888888
Q ss_pred CCcCCCCCCccCCCCCCCcEEEccCccCCCCCcccccCCCCCcEEEccCccCCC--cCcccccCCCCCCEEeeeCCcCCC
Q 004275 166 DNQLVGPLPENLGNLKSLRRILLSSNNFTGSIPESYGNLKNLTEFRIDGSNLTG--RIPNFIGNWTKLDRLDLQGTSLEG 243 (764)
Q Consensus 166 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~--~~p~~~~~l~~L~~L~L~~N~l~~ 243 (764)
+|+++ .+|..+. ++|++|++++|++++..+..+.++++|++|++++|.++. ..+..+..+++|++|++++|.++.
T Consensus 109 ~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~ 185 (330)
T 1xku_A 109 KNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT 185 (330)
T ss_dssp SSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS
T ss_pred CCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcccc
Confidence 88887 5565554 688888888888887777778888888888888888853 667778888888888888888874
Q ss_pred CCccchhcCCCCCEEEcCCCCCCCCCCCCccCCccccccccccccccccCCccccCCCCCCEEeccCCCCCCCccccccC
Q 004275 244 PIPSTISQLKNLTELRISDLKGSSSSFPNLQDMKKMERLILRNCLITGRIPEYIEDMTDLKILDLSFNQLTGPVPGILQN 323 (764)
Q Consensus 244 ~~p~~l~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ 323 (764)
+|..+. ++|++|++++|.+.......+..+++|++|++++|.+++..+..+..+++|++|++++|+++ .+|..+..
T Consensus 186 -l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~ 261 (330)
T 1xku_A 186 -IPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLAD 261 (330)
T ss_dssp -CCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTT
T ss_pred -CCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhcc
Confidence 454443 78888888887655544445777888888888888888777777888888888888888888 67777888
Q ss_pred CCCCCEEeccCCcCcCCCChhhh--------cCCCeEEeecCcCCC
Q 004275 324 LKKIDYIFLTNNSLSGTLPDWIL--------TSEKNLDLSYNNFTE 361 (764)
Q Consensus 324 l~~L~~L~L~~N~l~g~~p~~~~--------~~l~~L~Ls~N~l~~ 361 (764)
+++|++|++++|++++..+..+. ..++.|++++|++..
T Consensus 262 l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~ 307 (330)
T 1xku_A 262 HKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQY 307 (330)
T ss_dssp CSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCG
T ss_pred CCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccc
Confidence 88888888888888865554441 334678888888864
No 32
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.96 E-value=1.1e-28 Score=288.65 Aligned_cols=284 Identities=22% Similarity=0.252 Sum_probs=226.0
Q ss_pred eeEEEEEcCCCcccccCCccCCCCCCCCEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEe
Q 004275 85 CHVTVILLKGFNLAGVIPEEFGNLTFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVL 164 (764)
Q Consensus 85 ~~v~~L~L~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 164 (764)
..++.|+|++|++++..+.+|.++++|++|||++|+|++..|.+|.+|++|++|+|++|++++..+..|.++++|++|+|
T Consensus 52 ~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~L 131 (635)
T 4g8a_A 52 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 131 (635)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEEC
T ss_pred cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEEC
Confidence 46899999999999988889999999999999999999888889999999999999999999777778999999999999
Q ss_pred eCCcCCCCCCccCCCCCCCcEEEccCccCCC-CCcccccCCCCCcEEEccCccCCCcCccccc-----------------
Q 004275 165 EDNQLVGPLPENLGNLKSLRRILLSSNNFTG-SIPESYGNLKNLTEFRIDGSNLTGRIPNFIG----------------- 226 (764)
Q Consensus 165 s~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~----------------- 226 (764)
++|++++..+..|+++++|++|+|++|.+++ .+|..++.+++|++|++++|++++..|..+.
T Consensus 132 s~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n 211 (635)
T 4g8a_A 132 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLN 211 (635)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTC
T ss_pred CCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccC
Confidence 9999998777789999999999999999975 4688889999999999998877543222110
Q ss_pred --------------------------------------------------------------------------------
Q 004275 227 -------------------------------------------------------------------------------- 226 (764)
Q Consensus 227 -------------------------------------------------------------------------------- 226 (764)
T Consensus 212 ~l~~i~~~~~~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~ 291 (635)
T 4g8a_A 212 PMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYL 291 (635)
T ss_dssp CCCEECTTTTTTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECC
T ss_pred cccccCcccccchhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhhh
Confidence
Q ss_pred -----------------------------------------------------------------------------CCC
Q 004275 227 -----------------------------------------------------------------------------NWT 229 (764)
Q Consensus 227 -----------------------------------------------------------------------------~l~ 229 (764)
.++
T Consensus 292 ~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~L~~l~l~~n~~~~~~~~~~l~ 371 (635)
T 4g8a_A 292 DYYLDGIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLP 371 (635)
T ss_dssp CSCEEECTTTTGGGTTCSEEEEESCEEEECGGGGSCCCCSEEEEESCEESSCCCCBCTTCCEEEEESCCSCCBCCCCBCT
T ss_pred cccccchhhhhhhhcccccccccccccccccccccchhhhhhhcccccccCcCcccchhhhhcccccccCCCCccccccc
Confidence 012
Q ss_pred CCCEEeeeCCcCCCC--C------------------------------------------------ccchhcCCCCCEEE
Q 004275 230 KLDRLDLQGTSLEGP--I------------------------------------------------PSTISQLKNLTELR 259 (764)
Q Consensus 230 ~L~~L~L~~N~l~~~--~------------------------------------------------p~~l~~l~~L~~L~ 259 (764)
+|+.|+++.|.+... . +..+..+++++.++
T Consensus 372 ~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ 451 (635)
T 4g8a_A 372 SLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLD 451 (635)
T ss_dssp TCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEEECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEE
T ss_pred ccccchhhccccccccccccchhhhhhhhhhhccccccccccccccccccccchhhhhcccccccccccccccccccccc
Confidence 233333333332100 0 01122334444455
Q ss_pred cCCCCCCCCCCCCccCCcccccccccccccc-ccCCccccCCCCCCEEeccCCCCCCCccccccCCCCCCEEeccCCcCc
Q 004275 260 ISDLKGSSSSFPNLQDMKKMERLILRNCLIT-GRIPEYIEDMTDLKILDLSFNQLTGPVPGILQNLKKIDYIFLTNNSLS 338 (764)
Q Consensus 260 L~~n~~~~~~~~~l~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~ 338 (764)
++.|.........+..++.|+.|++++|.+. +.+|..+..+++|++|+|++|+|++.+|..|.++++|++|+|++|+|+
T Consensus 452 ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~ 531 (635)
T 4g8a_A 452 ISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFF 531 (635)
T ss_dssp CTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCC
T ss_pred ccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCC
Confidence 5554443333344778899999999999754 467888999999999999999999988999999999999999999999
Q ss_pred CCCChhh--hcCCCeEEeecCcCCCCCCcccc
Q 004275 339 GTLPDWI--LTSEKNLDLSYNNFTESSPATCR 368 (764)
Q Consensus 339 g~~p~~~--~~~l~~L~Ls~N~l~~~~p~~~~ 368 (764)
+..|..+ .+.++.|||++|+|++.+|....
T Consensus 532 ~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~ 563 (635)
T 4g8a_A 532 SLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQ 563 (635)
T ss_dssp BCCCGGGTTCTTCCEEECTTSCCCBCCSSCTT
T ss_pred CCChhHHhCCCCCCEEECCCCcCCCCCHHHHH
Confidence 8888776 46789999999999999887643
No 33
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.96 E-value=3.3e-28 Score=261.45 Aligned_cols=267 Identities=20% Similarity=0.273 Sum_probs=222.9
Q ss_pred eeEEEEEcCCCcccccCCccCCCCCCCCEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEe
Q 004275 85 CHVTVILLKGFNLAGVIPEEFGNLTFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVL 164 (764)
Q Consensus 85 ~~v~~L~L~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 164 (764)
..++.|+|++|++.+..+..|..+++|++|+|++|.+++..|..|..+++|++|+|++|.++ .+|..+. ++|++|++
T Consensus 52 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~l 128 (330)
T 1xku_A 52 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMP--KTLQELRV 128 (330)
T ss_dssp TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSCC--TTCCEEEC
T ss_pred CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCC-ccChhhc--ccccEEEC
Confidence 46888999999999887878999999999999999999888999999999999999999998 6776664 78999999
Q ss_pred eCCcCCCCCCccCCCCCCCcEEEccCccCCC--CCcccccCCCCCcEEEccCccCCCcCcccccCCCCCCEEeeeCCcCC
Q 004275 165 EDNQLVGPLPENLGNLKSLRRILLSSNNFTG--SIPESYGNLKNLTEFRIDGSNLTGRIPNFIGNWTKLDRLDLQGTSLE 242 (764)
Q Consensus 165 s~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~ 242 (764)
++|.+++..+..+.++++|++|++++|.+.. ..+..+..+++|++|++++|.++. +|..+. ++|++|++++|+++
T Consensus 129 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~l~ 205 (330)
T 1xku_A 129 HENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT-IPQGLP--PSLTELHLDGNKIT 205 (330)
T ss_dssp CSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS-CCSSCC--TTCSEEECTTSCCC
T ss_pred CCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcccc-CCcccc--ccCCEEECCCCcCC
Confidence 9999997777778999999999999999863 677889999999999999999984 555543 78999999999999
Q ss_pred CCCccchhcCCCCCEEEcCCCCCCCCCCCCccCCccccccccccccccccCCccccCCCCCCEEeccCCCCCCCcccccc
Q 004275 243 GPIPSTISQLKNLTELRISDLKGSSSSFPNLQDMKKMERLILRNCLITGRIPEYIEDMTDLKILDLSFNQLTGPVPGILQ 322 (764)
Q Consensus 243 ~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~ 322 (764)
+..|..+..+++|+.|++++|.+.......+..+++|++|++++|+++ .+|..+..+++|++|++++|++++..+..|.
T Consensus 206 ~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~ 284 (330)
T 1xku_A 206 KVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFC 284 (330)
T ss_dssp EECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSS
T ss_pred ccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcC
Confidence 888889999999999999997766554446888999999999999998 7888889999999999999999977776665
Q ss_pred C------CCCCCEEeccCCcCcC--CCChhh--hcCCCeEEeecCc
Q 004275 323 N------LKKIDYIFLTNNSLSG--TLPDWI--LTSEKNLDLSYNN 358 (764)
Q Consensus 323 ~------l~~L~~L~L~~N~l~g--~~p~~~--~~~l~~L~Ls~N~ 358 (764)
. ...++.+++++|++.. ..|..+ ...++.++|++|+
T Consensus 285 ~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 285 PPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp CSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC----
T ss_pred CcccccccccccceEeecCcccccccCccccccccceeEEEecccC
Confidence 4 3778899999999863 334444 2345688888885
No 34
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.96 E-value=7.7e-29 Score=286.58 Aligned_cols=112 Identities=26% Similarity=0.360 Sum_probs=82.4
Q ss_pred eeEEEEEcCCCcccccCCccCCCCCCCCEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEe
Q 004275 85 CHVTVILLKGFNLAGVIPEEFGNLTFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVL 164 (764)
Q Consensus 85 ~~v~~L~L~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 164 (764)
.+++.|+|++|.+.+..|..|.++++|++|+|++|.+++..|..|+.+++|++|++++|.+++..+..++++++|++|+|
T Consensus 52 ~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 131 (570)
T 2z63_A 52 PELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNV 131 (570)
T ss_dssp SSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCSCTTCTTCCEEEC
T ss_pred CCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccccccccccCCCccccccccccEEec
Confidence 45777888877777766777777888888888888777766677777777777777777777555556777777777777
Q ss_pred eCCcCCC-CCCccCCCCCCCcEEEccCccCCCC
Q 004275 165 EDNQLVG-PLPENLGNLKSLRRILLSSNNFTGS 196 (764)
Q Consensus 165 s~N~l~~-~~p~~l~~l~~L~~L~Ls~N~l~~~ 196 (764)
++|.+++ .+|..|+++++|++|++++|++++.
T Consensus 132 ~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~ 164 (570)
T 2z63_A 132 AHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSI 164 (570)
T ss_dssp CSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEE
T ss_pred CCCccceecChhhhcccCCCCEEeCcCCcccee
Confidence 7777765 4577777777777777777766543
No 35
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.96 E-value=1.7e-29 Score=274.18 Aligned_cols=254 Identities=20% Similarity=0.207 Sum_probs=154.1
Q ss_pred CCCEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEeeCCcCCCCCCccCCCCCCCcEEEcc
Q 004275 110 FLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVLEDNQLVGPLPENLGNLKSLRRILLS 189 (764)
Q Consensus 110 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls 189 (764)
+|++|+|++|.+++..+..|.++++|++|+|++|.+++..|..|+++++|++|+|++|++++..+..+.++++|++|+++
T Consensus 53 ~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 132 (353)
T 2z80_A 53 AVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLL 132 (353)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECT
T ss_pred cCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECC
Confidence 56666666666665545566666666666666666666556666666666666666666664333336666666666666
Q ss_pred CccCCCCCc-ccccCCCCCcEEEccCcc-CCCcCcccccCCCCCCEEeeeCCcCCCCCccchhcCCCCCEEEcCCCCCCC
Q 004275 190 SNNFTGSIP-ESYGNLKNLTEFRIDGSN-LTGRIPNFIGNWTKLDRLDLQGTSLEGPIPSTISQLKNLTELRISDLKGSS 267 (764)
Q Consensus 190 ~N~l~~~~p-~~~~~l~~L~~L~L~~n~-l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~n~~~~ 267 (764)
+|++++..+ ..+..+++|++|++++|+ ++...+..+..+++|++|++++|.+++..|..+..+++|++|++++|....
T Consensus 133 ~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~ 212 (353)
T 2z80_A 133 GNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHIL 212 (353)
T ss_dssp TCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTT
T ss_pred CCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCcccc
Confidence 666663322 356666666666666663 444445566666666666666666666666666666666666666654321
Q ss_pred CCCCCccCCccccccccccccccccCCccc---cCCCCCCEEeccCCCCCC----CccccccCCCCCCEEeccCCcCcCC
Q 004275 268 SSFPNLQDMKKMERLILRNCLITGRIPEYI---EDMTDLKILDLSFNQLTG----PVPGILQNLKKIDYIFLTNNSLSGT 340 (764)
Q Consensus 268 ~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~---~~l~~L~~L~Ls~N~l~g----~~p~~~~~l~~L~~L~L~~N~l~g~ 340 (764)
.....+..+++|++|++++|.+++..+..+ ...+.++.+++++|.+++ .+|..+..+++|+.|++++|+++ .
T Consensus 213 ~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~-~ 291 (353)
T 2z80_A 213 LLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLK-S 291 (353)
T ss_dssp HHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCC-C
T ss_pred chhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCC-c
Confidence 111113345666666777666665444332 234566677777776665 35566667777777777777776 4
Q ss_pred CChhh---hcCCCeEEeecCcCCCCCC
Q 004275 341 LPDWI---LTSEKNLDLSYNNFTESSP 364 (764)
Q Consensus 341 ~p~~~---~~~l~~L~Ls~N~l~~~~p 364 (764)
+|..+ .+.++.|++++|++++..|
T Consensus 292 i~~~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 292 VPDGIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp CCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred cCHHHHhcCCCCCEEEeeCCCccCcCC
Confidence 55543 3455677777777776544
No 36
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.96 E-value=6e-29 Score=286.28 Aligned_cols=136 Identities=18% Similarity=0.301 Sum_probs=114.4
Q ss_pred eeeEEEEEcCCCcccccCCccCCCCCCCCEEEccCCcCCccCchhhhcCCCCcEEecccCcCcc-cCCcCcCCCCCCCEE
Q 004275 84 VCHVTVILLKGFNLAGVIPEEFGNLTFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSG-SIPLEIGDISTLEEL 162 (764)
Q Consensus 84 ~~~v~~L~L~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~-~~p~~~~~l~~L~~L 162 (764)
..+++.|+|++|.+.+..|..|..+++|++|||++|.+++..|..|+++++|++|+|++|.+++ .+|..++++++|++|
T Consensus 49 l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L 128 (549)
T 2z81_A 49 CANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTL 128 (549)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEE
T ss_pred CCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEE
Confidence 3479999999999999888899999999999999999998888889999999999999999986 467789999999999
Q ss_pred EeeCCcCCCCCC-ccCCCCCCCcEEEccCccCCCCCcccccC------------------------CCCCcEEEccCccC
Q 004275 163 VLEDNQLVGPLP-ENLGNLKSLRRILLSSNNFTGSIPESYGN------------------------LKNLTEFRIDGSNL 217 (764)
Q Consensus 163 ~Ls~N~l~~~~p-~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~------------------------l~~L~~L~L~~n~l 217 (764)
++++|.+.+.+| ..+.++++|++|++++|++++..|..+.. +++|++|++++|++
T Consensus 129 ~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l 208 (549)
T 2z81_A 129 RIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNL 208 (549)
T ss_dssp EEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBC
T ss_pred ECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCceEecccCcccccchhhHhhcccccEEEccCCcc
Confidence 999998555555 57888999999999999888777766544 45667777777776
Q ss_pred CC
Q 004275 218 TG 219 (764)
Q Consensus 218 ~~ 219 (764)
++
T Consensus 209 ~~ 210 (549)
T 2z81_A 209 AR 210 (549)
T ss_dssp TT
T ss_pred cc
Confidence 65
No 37
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.96 E-value=5.3e-28 Score=285.85 Aligned_cols=279 Identities=22% Similarity=0.277 Sum_probs=165.7
Q ss_pred EEEEEcCCCcccccCCccCCCCCC--CCEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEe
Q 004275 87 VTVILLKGFNLAGVIPEEFGNLTF--LQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVL 164 (764)
Q Consensus 87 v~~L~L~~~~l~g~~p~~l~~L~~--L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 164 (764)
++.|+++++.+.+..|..|..++. |++|+|++|.+++..|..|+.+++|++|+|++|.+.+..|..|..+++|++|++
T Consensus 224 L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 303 (680)
T 1ziw_A 224 IRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNL 303 (680)
T ss_dssp CCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEEC
T ss_pred ccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEec
Confidence 455555555555555555555433 566666666555555555555556666666665555555555555555555555
Q ss_pred eCCcCCC-----CCCc----cCCCCCCCcEEEccCccCCCCCcccccCCC----------------------------CC
Q 004275 165 EDNQLVG-----PLPE----NLGNLKSLRRILLSSNNFTGSIPESYGNLK----------------------------NL 207 (764)
Q Consensus 165 s~N~l~~-----~~p~----~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~----------------------------~L 207 (764)
++|...+ .+|. .|..+++|++|++++|++++..+..|.+++ +|
T Consensus 304 ~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L 383 (680)
T 1ziw_A 304 KRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPL 383 (680)
T ss_dssp TTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCC
T ss_pred cchhhhcccccccccccChhhcccCCCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcC
Confidence 4443322 1221 344444555555555554444444444444 45
Q ss_pred cEEEccCccCCCcCcccccCCCCCCEEeeeCCcCCCCCc-cchhcCCCCCEEEcCCCCCCCCCCCCccCCcccccccccc
Q 004275 208 TEFRIDGSNLTGRIPNFIGNWTKLDRLDLQGTSLEGPIP-STISQLKNLTELRISDLKGSSSSFPNLQDMKKMERLILRN 286 (764)
Q Consensus 208 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~ 286 (764)
+.|++++|++++..|..+..+++|+.|++++|.+++.+| ..+..+++|++|++++|+........+..+++|+.|++++
T Consensus 384 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~ 463 (680)
T 1ziw_A 384 HILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRR 463 (680)
T ss_dssp CEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTT
T ss_pred ceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhcc
Confidence 555555556665566666677777777777777765444 5666677777777777654444444466667777777777
Q ss_pred cccc--ccCCccccCCCCCCEEeccCCCCCCCccccccCCCCCCEEeccCCcCcCCCCh--------hh--hcCCCeEEe
Q 004275 287 CLIT--GRIPEYIEDMTDLKILDLSFNQLTGPVPGILQNLKKIDYIFLTNNSLSGTLPD--------WI--LTSEKNLDL 354 (764)
Q Consensus 287 N~l~--~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~--------~~--~~~l~~L~L 354 (764)
|.++ +.+|..+..+++|+.|++++|++++..|..+..+++|++|++++|++++..+. .+ .+.++.|+|
T Consensus 464 n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L 543 (680)
T 1ziw_A 464 VALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNL 543 (680)
T ss_dssp SCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEEC
T ss_pred ccccccccCCcccccCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEEC
Confidence 7765 45667777777777777777777766666777777777777777777653211 11 345667777
Q ss_pred ecCcCCCCCCc
Q 004275 355 SYNNFTESSPA 365 (764)
Q Consensus 355 s~N~l~~~~p~ 365 (764)
++|+++..++.
T Consensus 544 ~~N~l~~i~~~ 554 (680)
T 1ziw_A 544 ESNGFDEIPVE 554 (680)
T ss_dssp CSSCCCCCCTT
T ss_pred CCCCCCCCCHH
Confidence 77777765554
No 38
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.96 E-value=5e-28 Score=259.72 Aligned_cols=236 Identities=22% Similarity=0.272 Sum_probs=204.0
Q ss_pred CCCCCCEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEeeCCcCCCCCCccCCCCCCCcEE
Q 004275 107 NLTFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVLEDNQLVGPLPENLGNLKSLRRI 186 (764)
Q Consensus 107 ~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L 186 (764)
..+++++|+|++|.++ .+|..+.++++|++|+|++|.++ .+|..++++++|++|+|++|.++ .+|..+.++++|++|
T Consensus 79 ~~~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L 155 (328)
T 4fcg_A 79 TQPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLREL 155 (328)
T ss_dssp TSTTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEE
T ss_pred cccceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEE
Confidence 3577889999999988 67888888999999999999988 88888888899999999998888 778888888888888
Q ss_pred EccCccCCCCCcccccCCCCCcEEEccCccCCCcCcccccCCCCCCEEeeeCCcCCCCCccchhcCCCCCEEEcCCCCCC
Q 004275 187 LLSSNNFTGSIPESYGNLKNLTEFRIDGSNLTGRIPNFIGNWTKLDRLDLQGTSLEGPIPSTISQLKNLTELRISDLKGS 266 (764)
Q Consensus 187 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~n~~~ 266 (764)
+|++|++.+.+|..+... .++..+..+++|++|++++|+++ .+|..++.+++|++|++++|.+.
T Consensus 156 ~L~~n~~~~~~p~~~~~~---------------~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~ 219 (328)
T 4fcg_A 156 SIRACPELTELPEPLAST---------------DASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS 219 (328)
T ss_dssp EEEEETTCCCCCSCSEEE---------------C-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCC
T ss_pred ECCCCCCccccChhHhhc---------------cchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCC
Confidence 888888887787765431 12234677999999999999999 78899999999999999997765
Q ss_pred CCCCCCccCCccccccccccccccccCCccccCCCCCCEEeccCCCCCCCccccccCCCCCCEEeccCCcCcCCCChhh-
Q 004275 267 SSSFPNLQDMKKMERLILRNCLITGRIPEYIEDMTDLKILDLSFNQLTGPVPGILQNLKKIDYIFLTNNSLSGTLPDWI- 345 (764)
Q Consensus 267 ~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~- 345 (764)
...+.+..+++|++|++++|.+.+.+|..+..+++|++|++++|++.+.+|..+..+++|++|++++|++.+.+|+++
T Consensus 220 -~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~ 298 (328)
T 4fcg_A 220 -ALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIA 298 (328)
T ss_dssp -CCCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGG
T ss_pred -cCchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHh
Confidence 333458899999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred -hcCCCeEEeecCcCCCC
Q 004275 346 -LTSEKNLDLSYNNFTES 362 (764)
Q Consensus 346 -~~~l~~L~Ls~N~l~~~ 362 (764)
++.++.+++..|.+...
T Consensus 299 ~L~~L~~l~l~~~~~~~l 316 (328)
T 4fcg_A 299 QLPANCIILVPPHLQAQL 316 (328)
T ss_dssp GSCTTCEEECCGGGSCC-
T ss_pred hccCceEEeCCHHHHHHH
Confidence 45678999988877643
No 39
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.96 E-value=4.9e-28 Score=266.45 Aligned_cols=267 Identities=22% Similarity=0.244 Sum_probs=224.9
Q ss_pred eeEEEEEcCCCcccccCCccCCCCCCCCEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEe
Q 004275 85 CHVTVILLKGFNLAGVIPEEFGNLTFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVL 164 (764)
Q Consensus 85 ~~v~~L~L~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 164 (764)
.+++.|+++++.+.+..+..|..+++|++|+|++|.+++..|..|+++++|++|+|++|.++...+..|+.+++|++|+|
T Consensus 69 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 148 (390)
T 3o6n_A 69 RQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSM 148 (390)
T ss_dssp CCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred ccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEEC
Confidence 46899999999999888889999999999999999999888888999999999999999999544445799999999999
Q ss_pred eCCcCCCCCCccCCCCCCCcEEEccCccCCCCCcccccCCCCC-------------------cEEEccCccCCCcCcccc
Q 004275 165 EDNQLVGPLPENLGNLKSLRRILLSSNNFTGSIPESYGNLKNL-------------------TEFRIDGSNLTGRIPNFI 225 (764)
Q Consensus 165 s~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L-------------------~~L~L~~n~l~~~~p~~~ 225 (764)
++|.+.+..|..+.++++|++|++++|++++.. +..+++| ++|++++|.++.. |.
T Consensus 149 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~---~~~l~~L~~L~l~~n~l~~~~~~~~L~~L~l~~n~l~~~-~~-- 222 (390)
T 3o6n_A 149 SNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVV-RG-- 222 (390)
T ss_dssp CSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCC---GGGCTTCSEEECCSSCCSEEECCSSCSEEECCSSCCCEE-EC--
T ss_pred CCCccCccChhhccCCCCCCEEECCCCcCCccc---cccccccceeecccccccccCCCCcceEEECCCCeeeec-cc--
Confidence 999999888888999999999999999998643 3344444 4555555555432 22
Q ss_pred cCCCCCCEEeeeCCcCCCCCccchhcCCCCCEEEcCCCCCCCCCCCCccCCccccccccccccccccCCccccCCCCCCE
Q 004275 226 GNWTKLDRLDLQGTSLEGPIPSTISQLKNLTELRISDLKGSSSSFPNLQDMKKMERLILRNCLITGRIPEYIEDMTDLKI 305 (764)
Q Consensus 226 ~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 305 (764)
...++|+.|++++|.+++. ..+..+++|++|++++|.+.......+..+++|++|++++|++++ +|..+..+++|++
T Consensus 223 ~~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~ 299 (390)
T 3o6n_A 223 PVNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKV 299 (390)
T ss_dssp CCCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCE
T ss_pred cccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCE
Confidence 2246899999999999864 578999999999999977665444558899999999999999995 5666788999999
Q ss_pred EeccCCCCCCCccccccCCCCCCEEeccCCcCcCCCChhhhcCCCeEEeecCcCCCC
Q 004275 306 LDLSFNQLTGPVPGILQNLKKIDYIFLTNNSLSGTLPDWILTSEKNLDLSYNNFTES 362 (764)
Q Consensus 306 L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~l~~L~Ls~N~l~~~ 362 (764)
|++++|+++ .+|..+..+++|+.|++++|+++.. |....+.++.|++++|++++.
T Consensus 300 L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~~-~~~~~~~L~~L~l~~N~~~~~ 354 (390)
T 3o6n_A 300 LDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL-KLSTHHTLKNLTLSHNDWDCN 354 (390)
T ss_dssp EECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC-CCCTTCCCSEEECCSSCEEHH
T ss_pred EECCCCcce-ecCccccccCcCCEEECCCCcccee-CchhhccCCEEEcCCCCccch
Confidence 999999999 5677788899999999999999854 555567889999999998764
No 40
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.95 E-value=1.3e-28 Score=261.70 Aligned_cols=258 Identities=19% Similarity=0.243 Sum_probs=171.5
Q ss_pred CCCCEEEccCCcCCccCchhhhcCCCCcEEecccCcCcc--cCCcCcCCCCCCCEEEeeCCcCCCCCCccCCCCCCCcEE
Q 004275 109 TFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSG--SIPLEIGDISTLEELVLEDNQLVGPLPENLGNLKSLRRI 186 (764)
Q Consensus 109 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L 186 (764)
++|++|+|++|.++...+..|.++++|++|+|++|.++. ..|..+..+++|++|+|++|.+. .+|..+..+++|++|
T Consensus 28 ~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L 106 (306)
T 2z66_A 28 SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHL 106 (306)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCEE
T ss_pred CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCCCccc-cChhhcCCCCCCCEE
Confidence 466677777777664333446667777777777776652 23455556667777777777665 355556667777777
Q ss_pred EccCccCCCCCc-ccccCCCCCcEEEccCccCCCcCcccccCCCCCCEEeeeCCcCCC-CCccchhcCCCCCEEEcCCCC
Q 004275 187 LLSSNNFTGSIP-ESYGNLKNLTEFRIDGSNLTGRIPNFIGNWTKLDRLDLQGTSLEG-PIPSTISQLKNLTELRISDLK 264 (764)
Q Consensus 187 ~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~l~~l~~L~~L~L~~n~ 264 (764)
++++|++++..+ ..+..+++|++|++++|.+++..+..+..+++|++|++++|.+++ .+|..+..+++|++|++++|.
T Consensus 107 ~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~ 186 (306)
T 2z66_A 107 DFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQ 186 (306)
T ss_dssp ECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSC
T ss_pred ECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCC
Confidence 777777665443 456666777777777777766666666667777777777777665 456666666777777776655
Q ss_pred CCCCCCCCccCCccccccccccccccccCCccccCCCCCCEEeccCCCCCCCccccccCCC-CCCEEeccCCcCcCCCCh
Q 004275 265 GSSSSFPNLQDMKKMERLILRNCLITGRIPEYIEDMTDLKILDLSFNQLTGPVPGILQNLK-KIDYIFLTNNSLSGTLPD 343 (764)
Q Consensus 265 ~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~-~L~~L~L~~N~l~g~~p~ 343 (764)
+.......+..+++|++|++++|++++..+..+..+++|++|++++|++++..|..+..++ +|++|++++|++++..+.
T Consensus 187 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~~ 266 (306)
T 2z66_A 187 LEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEH 266 (306)
T ss_dssp CCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGGG
T ss_pred cCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecccCh
Confidence 4443333466677777777777888776666788888899999999998888888888874 888999999988876432
Q ss_pred -hh---hcCCCeEEeecCcCCCCCCccc
Q 004275 344 -WI---LTSEKNLDLSYNNFTESSPATC 367 (764)
Q Consensus 344 -~~---~~~l~~L~Ls~N~l~~~~p~~~ 367 (764)
++ ....+.+.+..+.+....|+..
T Consensus 267 ~~~~~~l~~~~~~~~~~~~~~C~~p~~~ 294 (306)
T 2z66_A 267 QSFLQWIKDQRQLLVEVERMECATPSDK 294 (306)
T ss_dssp HHHHHHHHHTGGGBSCGGGCBEEESGGG
T ss_pred HHHHHHHHhhhhhhccccccccCCchhh
Confidence 11 2223344555666666555543
No 41
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.95 E-value=7.2e-28 Score=279.99 Aligned_cols=268 Identities=22% Similarity=0.236 Sum_probs=227.2
Q ss_pred eeEEEEEcCCCcccccCCccCCCCCCCCEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEe
Q 004275 85 CHVTVILLKGFNLAGVIPEEFGNLTFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVL 164 (764)
Q Consensus 85 ~~v~~L~L~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 164 (764)
.+++.|+|++|.+.+..|..|+.+++|++|+|++|.+++..|..|+.+++|++|+|++|.+++..+..|+.+++|++|+|
T Consensus 75 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 154 (597)
T 3oja_B 75 RQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSM 154 (597)
T ss_dssp CCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEe
Confidence 46899999999999988889999999999999999999988888999999999999999999665566799999999999
Q ss_pred eCCcCCCCCCccCCCCCCCcEEEccCccCCCCCcccccCCCCCcEEEccCccCCC------------------cCccccc
Q 004275 165 EDNQLVGPLPENLGNLKSLRRILLSSNNFTGSIPESYGNLKNLTEFRIDGSNLTG------------------RIPNFIG 226 (764)
Q Consensus 165 s~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~------------------~~p~~~~ 226 (764)
++|.+++..|..|.++++|++|+|++|.+++.. +..+++|+.|++++|.+++ .+|..
T Consensus 155 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~---~~~l~~L~~L~l~~n~l~~l~~~~~L~~L~ls~n~l~~~~~~-- 229 (597)
T 3oja_B 155 SNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGP-- 229 (597)
T ss_dssp CSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC---GGGCTTCSEEECCSSCCSEEECCTTCSEEECCSSCCCEEECS--
T ss_pred eCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC---hhhhhhhhhhhcccCccccccCCchhheeeccCCcccccccc--
Confidence 999999988889999999999999999998653 3344555555555444432 11211
Q ss_pred CCCCCCEEeeeCCcCCCCCccchhcCCCCCEEEcCCCCCCCCCCCCccCCccccccccccccccccCCccccCCCCCCEE
Q 004275 227 NWTKLDRLDLQGTSLEGPIPSTISQLKNLTELRISDLKGSSSSFPNLQDMKKMERLILRNCLITGRIPEYIEDMTDLKIL 306 (764)
Q Consensus 227 ~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 306 (764)
..++|+.|+|++|.+++ +..+..+++|+.|++++|.+.......+..+++|+.|+|++|.+++ +|..+..+++|+.|
T Consensus 230 ~~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L 306 (597)
T 3oja_B 230 VNVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVL 306 (597)
T ss_dssp CCSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEE
T ss_pred cCCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEE
Confidence 12589999999999987 3679999999999999977665444568899999999999999996 57777889999999
Q ss_pred eccCCCCCCCccccccCCCCCCEEeccCCcCcCCCChhhhcCCCeEEeecCcCCCC
Q 004275 307 DLSFNQLTGPVPGILQNLKKIDYIFLTNNSLSGTLPDWILTSEKNLDLSYNNFTES 362 (764)
Q Consensus 307 ~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~l~~L~Ls~N~l~~~ 362 (764)
+|++|.++ .+|..+..+++|++|++++|.+++. |....+.++.|++++|++++.
T Consensus 307 ~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~L~~L~l~~N~~~~~ 360 (597)
T 3oja_B 307 DLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL-KLSTHHTLKNLTLSHNDWDCN 360 (597)
T ss_dssp ECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC-CCCTTCCCSEEECCSSCEEHH
T ss_pred ECCCCCCC-ccCcccccCCCCCEEECCCCCCCCc-ChhhcCCCCEEEeeCCCCCCh
Confidence 99999999 6788889999999999999999865 544567889999999998864
No 42
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.95 E-value=4.4e-27 Score=263.79 Aligned_cols=256 Identities=20% Similarity=0.144 Sum_probs=217.6
Q ss_pred eeEEEEEcCCCcccccCCccCCCCCCCCEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEe
Q 004275 85 CHVTVILLKGFNLAGVIPEEFGNLTFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVL 164 (764)
Q Consensus 85 ~~v~~L~L~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 164 (764)
.+++.|+++++++.+. | .+..+++|++|+|++|.+++. | ++.+++|++|++++|.+++. | ++.+++|++|++
T Consensus 42 ~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L 113 (457)
T 3bz5_A 42 ATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLNC 113 (457)
T ss_dssp TTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEEC
T ss_pred CCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEEC
Confidence 4689999999999875 5 689999999999999999974 4 89999999999999999964 4 889999999999
Q ss_pred eCCcCCCCCCccCCCCCCCcEEEccCccCCCCCcccccCCCCCcEEEccCccCCCcCcccccCCCCCCEEeeeCCcCCCC
Q 004275 165 EDNQLVGPLPENLGNLKSLRRILLSSNNFTGSIPESYGNLKNLTEFRIDGSNLTGRIPNFIGNWTKLDRLDLQGTSLEGP 244 (764)
Q Consensus 165 s~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 244 (764)
++|++++ +| ++++++|++|++++|++++. + ++.+++|++|++++|+..+.+ .++.+++|++|++++|++++
T Consensus 114 ~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~- 184 (457)
T 3bz5_A 114 DTNKLTK-LD--VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITE- 184 (457)
T ss_dssp CSSCCSC-CC--CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCC-
T ss_pred CCCcCCe-ec--CCCCCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCccce-
Confidence 9999987 44 89999999999999999974 3 889999999999999776666 48889999999999999997
Q ss_pred CccchhcCCCCCEEEcCCCCCCCCCCCCccCCccccccccccccccccCCccccCCCCCCEEeccCCCCCCCccccccCC
Q 004275 245 IPSTISQLKNLTELRISDLKGSSSSFPNLQDMKKMERLILRNCLITGRIPEYIEDMTDLKILDLSFNQLTGPVPGILQNL 324 (764)
Q Consensus 245 ~p~~l~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l 324 (764)
+| +..+++|+.|++++|++... .+..+++|++|++++|++++ +| +..+++|++|++++|++++..+..+.++
T Consensus 185 l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~~~l~~L 256 (457)
T 3bz5_A 185 LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELDVSTLSKL 256 (457)
T ss_dssp CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCCCTTCTTC
T ss_pred ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcCHHHCCCC
Confidence 44 88999999999999776654 37788999999999999997 56 7889999999999999998766555555
Q ss_pred C-------CCCEEeccCCcCcCCCChhhhcCCCeEEeecCcCCCCCCc
Q 004275 325 K-------KIDYIFLTNNSLSGTLPDWILTSEKNLDLSYNNFTESSPA 365 (764)
Q Consensus 325 ~-------~L~~L~L~~N~l~g~~p~~~~~~l~~L~Ls~N~l~~~~p~ 365 (764)
+ +|+.|++++|.+.|.+|..-.+.++.||+++|.+.+.+|.
T Consensus 257 ~~L~l~~n~L~~L~l~~n~~~~~~~~~~l~~L~~L~Ls~n~~l~~l~~ 304 (457)
T 3bz5_A 257 TTLHCIQTDLLEIDLTHNTQLIYFQAEGCRKIKELDVTHNTQLYLLDC 304 (457)
T ss_dssp CEEECTTCCCSCCCCTTCTTCCEEECTTCTTCCCCCCTTCTTCCEEEC
T ss_pred CEEeccCCCCCEEECCCCccCCcccccccccCCEEECCCCcccceecc
Confidence 4 5667777777777777755556777888888887776654
No 43
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.95 E-value=3.1e-28 Score=258.73 Aligned_cols=275 Identities=18% Similarity=0.190 Sum_probs=233.8
Q ss_pred CCceeccCCCC----CCceeeEEEEEcCCCcccccCCccCCCCCCCCEEEccCCcCCc--cCchhhhcCCCCcEEecccC
Q 004275 70 GSNFTCDCTYS----NNTVCHVTVILLKGFNLAGVIPEEFGNLTFLQEVDLSRNYFNG--SLPKSFARLQNLTKLLILGN 143 (764)
Q Consensus 70 ~~gv~C~~~~~----~~~~~~v~~L~L~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~n 143 (764)
|.++.|..... .....+++.|+|++|++....+..|.++++|++|+|++|.++. ..|..+..+++|++|+|++|
T Consensus 9 ~~~l~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n 88 (306)
T 2z66_A 9 GTEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFN 88 (306)
T ss_dssp TTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCSC
T ss_pred CCEEEcCCCCcccCCCCCCCCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCCC
Confidence 78888864221 1122479999999999986555568999999999999999984 34788889999999999999
Q ss_pred cCcccCCcCcCCCCCCCEEEeeCCcCCCCCC-ccCCCCCCCcEEEccCccCCCCCcccccCCCCCcEEEccCccCCC-cC
Q 004275 144 RLSGSIPLEIGDISTLEELVLEDNQLVGPLP-ENLGNLKSLRRILLSSNNFTGSIPESYGNLKNLTEFRIDGSNLTG-RI 221 (764)
Q Consensus 144 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~-~~ 221 (764)
.+. .+|..+..+++|++|++++|.+++..+ ..+..+++|++|++++|.+.+..+..+..+++|++|++++|.+++ .+
T Consensus 89 ~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 167 (306)
T 2z66_A 89 GVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFL 167 (306)
T ss_dssp SEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEE
T ss_pred ccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccc
Confidence 998 578889999999999999999987655 578999999999999999998889999999999999999999987 67
Q ss_pred cccccCCCCCCEEeeeCCcCCCCCccchhcCCCCCEEEcCCCCCCCCCCCCccCCccccccccccccccccCCccccCCC
Q 004275 222 PNFIGNWTKLDRLDLQGTSLEGPIPSTISQLKNLTELRISDLKGSSSSFPNLQDMKKMERLILRNCLITGRIPEYIEDMT 301 (764)
Q Consensus 222 p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 301 (764)
|..+..+++|++|++++|++++..|..+..+++|+.|++++|.+.......+..+++|++|++++|++++..|..+..++
T Consensus 168 ~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~ 247 (306)
T 2z66_A 168 PDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFP 247 (306)
T ss_dssp CSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCC
T ss_pred hhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhh
Confidence 88999999999999999999988899999999999999999877655444588899999999999999999999999884
Q ss_pred -CCCEEeccCCCCCCCcc--ccccCCCCCCEEeccCCcCcCCCChhh
Q 004275 302 -DLKILDLSFNQLTGPVP--GILQNLKKIDYIFLTNNSLSGTLPDWI 345 (764)
Q Consensus 302 -~L~~L~Ls~N~l~g~~p--~~~~~l~~L~~L~L~~N~l~g~~p~~~ 345 (764)
+|++|++++|.+++.-+ .....+...+.+....+.+....|..+
T Consensus 248 ~~L~~L~L~~N~~~~~c~~~~~~~~l~~~~~~~~~~~~~~C~~p~~~ 294 (306)
T 2z66_A 248 SSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERMECATPSDK 294 (306)
T ss_dssp TTCCEEECTTCCEECSGGGHHHHHHHHHTGGGBSCGGGCBEEESGGG
T ss_pred ccCCEEEccCCCeecccChHHHHHHHHhhhhhhccccccccCCchhh
Confidence 99999999999987533 223334455556677788888888765
No 44
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.95 E-value=1.2e-26 Score=260.36 Aligned_cols=272 Identities=17% Similarity=0.106 Sum_probs=215.0
Q ss_pred eeEEEEEcCCCcccccCCccCCCCCCCCEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEe
Q 004275 85 CHVTVILLKGFNLAGVIPEEFGNLTFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVL 164 (764)
Q Consensus 85 ~~v~~L~L~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 164 (764)
.+++.|+|++|.+.+. | ++.+++|++|+|++|.+++. | ++++++|++|++++|++++ +| ++.+++|++|++
T Consensus 64 ~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l 134 (457)
T 3bz5_A 64 TGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNC 134 (457)
T ss_dssp TTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEECCSSCCSC-CC--CTTCTTCCEEEC
T ss_pred CCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEECCCCcCCe-ec--CCCCCcCCEEEC
Confidence 4689999999999884 4 88999999999999999874 4 8899999999999999986 44 889999999999
Q ss_pred eCCcCCCCCCccCCCCCCCcEEEccCccCCCCCcccccCCCCCcEEEccCccCCCcCcccccCCCCCCEEeeeCCcCCCC
Q 004275 165 EDNQLVGPLPENLGNLKSLRRILLSSNNFTGSIPESYGNLKNLTEFRIDGSNLTGRIPNFIGNWTKLDRLDLQGTSLEGP 244 (764)
Q Consensus 165 s~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 244 (764)
++|++++. + ++++++|++|++++|+..+.+ .+..+++|++|++++|++++ +| +..+++|+.|++++|++++.
T Consensus 135 ~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~ 206 (457)
T 3bz5_A 135 ARNTLTEI-D--VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL 206 (457)
T ss_dssp TTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC
T ss_pred CCCcccee-c--cccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee
Confidence 99999874 3 888999999999999766666 47889999999999999987 45 78889999999999999875
Q ss_pred CccchhcCCCCCEEEcCCCCCCCCCCCCccCCccccccccccccccccCCccccCCC-------CCCEEeccCCCCCCCc
Q 004275 245 IPSTISQLKNLTELRISDLKGSSSSFPNLQDMKKMERLILRNCLITGRIPEYIEDMT-------DLKILDLSFNQLTGPV 317 (764)
Q Consensus 245 ~p~~l~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-------~L~~L~Ls~N~l~g~~ 317 (764)
.++.+++|+.|++++|++.. +| +..+++|++|++++|++++..+..+..++ +|+.|++++|.+.+.+
T Consensus 207 ---~l~~l~~L~~L~Ls~N~l~~--ip-~~~l~~L~~L~l~~N~l~~~~~~~l~~L~~L~l~~n~L~~L~l~~n~~~~~~ 280 (457)
T 3bz5_A 207 ---DLNQNIQLTFLDCSSNKLTE--ID-VTPLTQLTYFDCSVNPLTELDVSTLSKLTTLHCIQTDLLEIDLTHNTQLIYF 280 (457)
T ss_dssp ---CCTTCTTCSEEECCSSCCSC--CC-CTTCTTCSEEECCSSCCSCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEE
T ss_pred ---ccccCCCCCEEECcCCcccc--cC-ccccCCCCEEEeeCCcCCCcCHHHCCCCCEEeccCCCCCEEECCCCccCCcc
Confidence 38888999999999977665 44 77888999999999999876555554443 4566666677666666
Q ss_pred cccccCCCCCCEEeccCCcCcCCCChhh----------hcCCCeEEeecCcCCCCCCcccccc-cceeeccccCC
Q 004275 318 PGILQNLKKIDYIFLTNNSLSGTLPDWI----------LTSEKNLDLSYNNFTESSPATCRES-RVNILSSFSST 381 (764)
Q Consensus 318 p~~~~~l~~L~~L~L~~N~l~g~~p~~~----------~~~l~~L~Ls~N~l~~~~p~~~~~~-~l~~~~~~~~~ 381 (764)
| +..+++|+.|++++|.+.+.+|... .+.++.|++++|+|++..-..|..+ .+++..|...+
T Consensus 281 ~--~~~l~~L~~L~Ls~n~~l~~l~~~~~~L~~L~l~~~~~L~~L~L~~N~l~~l~l~~l~~L~~L~l~~N~l~~ 353 (457)
T 3bz5_A 281 Q--AEGCRKIKELDVTHNTQLYLLDCQAAGITELDLSQNPKLVYLYLNNTELTELDVSHNTKLKSLSCVNAHIQD 353 (457)
T ss_dssp E--CTTCTTCCCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCSEEECCSSCCCB
T ss_pred c--ccccccCCEEECCCCcccceeccCCCcceEechhhcccCCEEECCCCcccccccccCCcCcEEECCCCCCCC
Confidence 6 4677888889999998877766422 2346788888998888632235554 45666665443
No 45
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.95 E-value=6.2e-28 Score=261.93 Aligned_cols=258 Identities=21% Similarity=0.220 Sum_probs=221.7
Q ss_pred eeEEEEEcCCCcccccCCccCCCCCCCCEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEe
Q 004275 85 CHVTVILLKGFNLAGVIPEEFGNLTFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVL 164 (764)
Q Consensus 85 ~~v~~L~L~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 164 (764)
.+++.|++++|++.+..+..|..+++|++|+|++|.+++..|..|.++++|++|+|++|.+++..+..|+.+++|++|+|
T Consensus 52 ~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 131 (353)
T 2z80_A 52 EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNL 131 (353)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEEC
T ss_pred ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEEC
Confidence 37999999999999877778999999999999999999888889999999999999999999655555899999999999
Q ss_pred eCCcCCCCCC-ccCCCCCCCcEEEccCcc-CCCCCcccccCCCCCcEEEccCccCCCcCcccccCCCCCCEEeeeCCcCC
Q 004275 165 EDNQLVGPLP-ENLGNLKSLRRILLSSNN-FTGSIPESYGNLKNLTEFRIDGSNLTGRIPNFIGNWTKLDRLDLQGTSLE 242 (764)
Q Consensus 165 s~N~l~~~~p-~~l~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~ 242 (764)
++|++++..+ ..+.++++|++|++++|+ +.+..+..+..+++|++|++++|.+++..|..+..+++|++|++++|.+.
T Consensus 132 ~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~ 211 (353)
T 2z80_A 132 LGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHI 211 (353)
T ss_dssp TTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCST
T ss_pred CCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccc
Confidence 9999985443 478999999999999994 77666788999999999999999999999999999999999999999997
Q ss_pred CCCccchhcCCCCCEEEcCCCCCCCCCCCC---ccCCccccccccccccccc----cCCccccCCCCCCEEeccCCCCCC
Q 004275 243 GPIPSTISQLKNLTELRISDLKGSSSSFPN---LQDMKKMERLILRNCLITG----RIPEYIEDMTDLKILDLSFNQLTG 315 (764)
Q Consensus 243 ~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~---l~~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~g 315 (764)
...+..+..+++|+.|++++|++....+.. ....+.++.++++++.+++ .+|..+..+++|++|++++|+++.
T Consensus 212 ~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~ 291 (353)
T 2z80_A 212 LLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKS 291 (353)
T ss_dssp THHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCC
T ss_pred cchhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCc
Confidence 544445567999999999998776654433 3345667778888887775 467888999999999999999995
Q ss_pred CccccccCCCCCCEEeccCCcCcCCCC
Q 004275 316 PVPGILQNLKKIDYIFLTNNSLSGTLP 342 (764)
Q Consensus 316 ~~p~~~~~l~~L~~L~L~~N~l~g~~p 342 (764)
..+..+..+++|++|++++|++++..|
T Consensus 292 i~~~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 292 VPDGIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp CCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred cCHHHHhcCCCCCEEEeeCCCccCcCC
Confidence 444456999999999999999999876
No 46
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.95 E-value=1.7e-26 Score=249.79 Aligned_cols=261 Identities=22% Similarity=0.369 Sum_probs=197.3
Q ss_pred eeEEEEEcCCCcccccCCccCCCCCCCCEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEe
Q 004275 85 CHVTVILLKGFNLAGVIPEEFGNLTFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVL 164 (764)
Q Consensus 85 ~~v~~L~L~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 164 (764)
.+++.|++++|.+.+. +. +..+++|++|+|++|.++. +| .+..+++|++|++++|.+++. |. +..+++|++|++
T Consensus 66 ~~L~~L~l~~n~i~~~-~~-~~~l~~L~~L~L~~n~i~~-~~-~~~~l~~L~~L~l~~n~i~~~-~~-~~~l~~L~~L~l 139 (347)
T 4fmz_A 66 TNLEYLNLNGNQITDI-SP-LSNLVKLTNLYIGTNKITD-IS-ALQNLTNLRELYLNEDNISDI-SP-LANLTKMYSLNL 139 (347)
T ss_dssp TTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCC-CG-GGTTCTTCSEEECTTSCCCCC-GG-GTTCTTCCEEEC
T ss_pred CCccEEEccCCccccc-hh-hhcCCcCCEEEccCCcccC-ch-HHcCCCcCCEEECcCCcccCc-hh-hccCCceeEEEC
Confidence 3578888888877654 33 7888888888888888874 33 578888888888888888743 33 778888888888
Q ss_pred eCCcCCCCCCccCCCCCCCcEEEccCccCCCCCcccccCCCCCcEEEccCccCCCcCcccccCCCCCCEEeeeCCcCCCC
Q 004275 165 EDNQLVGPLPENLGNLKSLRRILLSSNNFTGSIPESYGNLKNLTEFRIDGSNLTGRIPNFIGNWTKLDRLDLQGTSLEGP 244 (764)
Q Consensus 165 s~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 244 (764)
++|.....++ .+..+++|++|++++|.+.+..+ +..+++|++|++++|.+++..+ +..+++|+.|++++|.+.+.
T Consensus 140 ~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~ 214 (347)
T 4fmz_A 140 GANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDI 214 (347)
T ss_dssp TTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCC
T ss_pred CCCCCccccc-chhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCccccccc--ccCCCccceeecccCCCCCC
Confidence 8886654444 37788888888888888775433 7788888888888888875433 77788888888888888765
Q ss_pred CccchhcCCCCCEEEcCCCCCCCCCCCCccCCccccccccccccccccCCccccCCCCCCEEeccCCCCCCCccccccCC
Q 004275 245 IPSTISQLKNLTELRISDLKGSSSSFPNLQDMKKMERLILRNCLITGRIPEYIEDMTDLKILDLSFNQLTGPVPGILQNL 324 (764)
Q Consensus 245 ~p~~l~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l 324 (764)
.+ +..+++|++|++++|.+... +.+..+++|++|++++|.+++. ..+..+++|++|++++|++++. ..+..+
T Consensus 215 ~~--~~~~~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l 286 (347)
T 4fmz_A 215 TP--VANMTRLNSLKIGNNKITDL--SPLANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNL 286 (347)
T ss_dssp GG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGC
T ss_pred ch--hhcCCcCCEEEccCCccCCC--cchhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCC
Confidence 44 77888888888888665432 3377788888888888888753 3577888888888888888854 357788
Q ss_pred CCCCEEeccCCcCcCCCChhh--hcCCCeEEeecCcCCCCCC
Q 004275 325 KKIDYIFLTNNSLSGTLPDWI--LTSEKNLDLSYNNFTESSP 364 (764)
Q Consensus 325 ~~L~~L~L~~N~l~g~~p~~~--~~~l~~L~Ls~N~l~~~~p 364 (764)
++|+.|++++|++++..|..+ .+.++.|++++|++++.+|
T Consensus 287 ~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~ 328 (347)
T 4fmz_A 287 SQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP 328 (347)
T ss_dssp TTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG
T ss_pred CCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC
Confidence 888888888888887777766 4567788888888888766
No 47
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.95 E-value=5e-27 Score=246.80 Aligned_cols=254 Identities=20% Similarity=0.205 Sum_probs=195.9
Q ss_pred EEEEcCCCcccccCCccCCCCCCCCEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEeeCC
Q 004275 88 TVILLKGFNLAGVIPEEFGNLTFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVLEDN 167 (764)
Q Consensus 88 ~~L~L~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N 167 (764)
+.++.+++++.. +|..+ .++|++|+|++|.+++..+..|..+++|++|+|++|.+++..|..|..+++|++|+|++|
T Consensus 14 ~~~~c~~~~l~~-ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 90 (285)
T 1ozn_A 14 VTTSCPQQGLQA-VPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDN 90 (285)
T ss_dssp CEEECCSSCCSS-CCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSC
T ss_pred eEEEcCcCCccc-CCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCC
Confidence 567788877764 45443 468999999999998777778888999999999999988777888888899999999888
Q ss_pred c-CCCCCCccCCCCCCCcEEEccCccCCCCCcccccCCCCCcEEEccCccCCCcCcccccCCCCCCEEeeeCCcCCCCCc
Q 004275 168 Q-LVGPLPENLGNLKSLRRILLSSNNFTGSIPESYGNLKNLTEFRIDGSNLTGRIPNFIGNWTKLDRLDLQGTSLEGPIP 246 (764)
Q Consensus 168 ~-l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 246 (764)
. +....|..+..+++|++|++++|++++..|..+.++++|++|++++|.+++..+..+..+++|++|++++|++++..+
T Consensus 91 ~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 170 (285)
T 1ozn_A 91 AQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPE 170 (285)
T ss_dssp TTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECT
T ss_pred CCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCH
Confidence 7 666557778888888888888888887777777788888888888887776666667777777777777777764444
Q ss_pred cchhcCCCCCEEEcCCCCCCCCCCCCccCCccccccccccccccccCCccccCCCCCCEEeccCCCCCCCccccccCCCC
Q 004275 247 STISQLKNLTELRISDLKGSSSSFPNLQDMKKMERLILRNCLITGRIPEYIEDMTDLKILDLSFNQLTGPVPGILQNLKK 326 (764)
Q Consensus 247 ~~l~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~ 326 (764)
..+. .+++|++|++++|.+++..|..+..+++|+.|++++|++++..+..+..+++
T Consensus 171 ~~~~------------------------~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~ 226 (285)
T 1ozn_A 171 RAFR------------------------GLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRA 226 (285)
T ss_dssp TTTT------------------------TCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTT
T ss_pred HHhc------------------------CccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcc
Confidence 3344 4455666666677777777888889999999999999999877788999999
Q ss_pred CCEEeccCCcCcCCCCh-hhhcCCCeEEeecCcCCCCCCcccc
Q 004275 327 IDYIFLTNNSLSGTLPD-WILTSEKNLDLSYNNFTESSPATCR 368 (764)
Q Consensus 327 L~~L~L~~N~l~g~~p~-~~~~~l~~L~Ls~N~l~~~~p~~~~ 368 (764)
|++|++++|++.+..+. ++...++.++.+.|.+.+..|+..+
T Consensus 227 L~~L~l~~N~~~c~~~~~~~~~~l~~~~~~~~~~~c~~p~~l~ 269 (285)
T 1ozn_A 227 LQYLRLNDNPWVCDCRARPLWAWLQKFRGSSSEVPCSLPQRLA 269 (285)
T ss_dssp CCEEECCSSCEECSGGGHHHHHHHHHCCSEECCCBEEESGGGT
T ss_pred cCEEeccCCCccCCCCcHHHHHHHHhcccccCccccCCchHhC
Confidence 99999999999876654 3333344555677777777665543
No 48
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.95 E-value=7.4e-27 Score=262.22 Aligned_cols=246 Identities=17% Similarity=0.201 Sum_probs=178.4
Q ss_pred EEcCCCcccccCCccCCCCCCCCEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEeeCCcC
Q 004275 90 ILLKGFNLAGVIPEEFGNLTFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVLEDNQL 169 (764)
Q Consensus 90 L~L~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l 169 (764)
++.++.++. .+|..+. ++|++|+|++|++++..|..|.++++|++|+|++|.+++..|..|.++++|++|+|++|++
T Consensus 59 v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l 135 (452)
T 3zyi_A 59 VVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWL 135 (452)
T ss_dssp EECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred EEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcC
Confidence 344444544 3565544 5889999999999888888899999999999999999888888888999999999999998
Q ss_pred CCCCCccCCCCCCCcEEEccCccCCCCCcccccCCCCCcEEEccCccCCCcCc-ccccCCCCCCEEeeeCCcCCCCCccc
Q 004275 170 VGPLPENLGNLKSLRRILLSSNNFTGSIPESYGNLKNLTEFRIDGSNLTGRIP-NFIGNWTKLDRLDLQGTSLEGPIPST 248 (764)
Q Consensus 170 ~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~ 248 (764)
++..+..|..+++|++|+|++|+++...+..|.++++|++|++++|+..+.++ ..+..+++|++|+|++|++++. | .
T Consensus 136 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~-~ 213 (452)
T 3zyi_A 136 TVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-P-N 213 (452)
T ss_dssp SBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-C-C
T ss_pred CccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-c-c
Confidence 87666778889999999999999887666778888888888888844433443 4677788888888888887743 3 3
Q ss_pred hhcCCCCCEEEcCCCCCCCCCCCCccCCccccccccccccccccCCccccCCCCCCEEeccCCCCCCCccccccCCCCCC
Q 004275 249 ISQLKNLTELRISDLKGSSSSFPNLQDMKKMERLILRNCLITGRIPEYIEDMTDLKILDLSFNQLTGPVPGILQNLKKID 328 (764)
Q Consensus 249 l~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~ 328 (764)
+..+++|+.|++++|.+.......+..+++|+.|++++|++++..|..|..+++|+.|+|++|++++..+..+..+++|+
T Consensus 214 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 293 (452)
T 3zyi_A 214 LTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLV 293 (452)
T ss_dssp CTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCC
T ss_pred ccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCC
Confidence 66666666666666554433333355666666666666666666666666666666666666666655556666666666
Q ss_pred EEeccCCcCcCC
Q 004275 329 YIFLTNNSLSGT 340 (764)
Q Consensus 329 ~L~L~~N~l~g~ 340 (764)
.|+|++|++...
T Consensus 294 ~L~L~~Np~~Cd 305 (452)
T 3zyi_A 294 ELHLHHNPWNCD 305 (452)
T ss_dssp EEECCSSCEECS
T ss_pred EEEccCCCcCCC
Confidence 666666666543
No 49
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.95 E-value=1e-26 Score=251.51 Aligned_cols=260 Identities=20% Similarity=0.309 Sum_probs=225.4
Q ss_pred eeeEEEEEcCCCcccccCCccCCCCCCCCEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEE
Q 004275 84 VCHVTVILLKGFNLAGVIPEEFGNLTFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELV 163 (764)
Q Consensus 84 ~~~v~~L~L~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 163 (764)
..+++.|++++|.+.. + +.+..+++|++|+|++|.+++. |. +..+++|++|++++|.....++ .+..+++|++|+
T Consensus 87 l~~L~~L~L~~n~i~~-~-~~~~~l~~L~~L~l~~n~i~~~-~~-~~~l~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~ 161 (347)
T 4fmz_A 87 LVKLTNLYIGTNKITD-I-SALQNLTNLRELYLNEDNISDI-SP-LANLTKMYSLNLGANHNLSDLS-PLSNMTGLNYLT 161 (347)
T ss_dssp CTTCCEEECCSSCCCC-C-GGGTTCTTCSEEECTTSCCCCC-GG-GTTCTTCCEEECTTCTTCCCCG-GGTTCTTCCEEE
T ss_pred CCcCCEEEccCCcccC-c-hHHcCCCcCCEEECcCCcccCc-hh-hccCCceeEEECCCCCCccccc-chhhCCCCcEEE
Confidence 3579999999999876 3 4699999999999999999854 44 8999999999999997764544 489999999999
Q ss_pred eeCCcCCCCCCccCCCCCCCcEEEccCccCCCCCcccccCCCCCcEEEccCccCCCcCcccccCCCCCCEEeeeCCcCCC
Q 004275 164 LEDNQLVGPLPENLGNLKSLRRILLSSNNFTGSIPESYGNLKNLTEFRIDGSNLTGRIPNFIGNWTKLDRLDLQGTSLEG 243 (764)
Q Consensus 164 Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 243 (764)
+++|.+.+..+ +..+++|++|++++|.+.+. +. +..+++|+.|++++|.+++..+ +..+++|++|++++|.+++
T Consensus 162 l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~-~~-~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~ 235 (347)
T 4fmz_A 162 VTESKVKDVTP--IANLTDLYSLSLNYNQIEDI-SP-LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITD 235 (347)
T ss_dssp CCSSCCCCCGG--GGGCTTCSEEECTTSCCCCC-GG-GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC
T ss_pred ecCCCcCCchh--hccCCCCCEEEccCCccccc-cc-ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCC
Confidence 99999986544 88999999999999999854 33 8899999999999999986654 8899999999999999986
Q ss_pred CCccchhcCCCCCEEEcCCCCCCCCCCCCccCCccccccccccccccccCCccccCCCCCCEEeccCCCCCCCccccccC
Q 004275 244 PIPSTISQLKNLTELRISDLKGSSSSFPNLQDMKKMERLILRNCLITGRIPEYIEDMTDLKILDLSFNQLTGPVPGILQN 323 (764)
Q Consensus 244 ~~p~~l~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ 323 (764)
..+ +..+++|++|++++|.+.. ++.+..+++|++|++++|.+++. ..+..+++|+.|++++|++++..|..+..
T Consensus 236 ~~~--~~~l~~L~~L~l~~n~l~~--~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~ 309 (347)
T 4fmz_A 236 LSP--LANLSQLTWLEIGTNQISD--INAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGG 309 (347)
T ss_dssp CGG--GTTCTTCCEEECCSSCCCC--CGGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHT
T ss_pred Ccc--hhcCCCCCEEECCCCccCC--ChhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhc
Confidence 544 8999999999999976654 46688999999999999999964 45888999999999999999999999999
Q ss_pred CCCCCEEeccCCcCcCCCChhhhcCCCeEEeecCcCC
Q 004275 324 LKKIDYIFLTNNSLSGTLPDWILTSEKNLDLSYNNFT 360 (764)
Q Consensus 324 l~~L~~L~L~~N~l~g~~p~~~~~~l~~L~Ls~N~l~ 360 (764)
+++|++|++++|++++..|....+.++.||+++|+|+
T Consensus 310 l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 310 LTNLTTLFLSQNHITDIRPLASLSKMDSADFANQVIK 346 (347)
T ss_dssp CTTCSEEECCSSSCCCCGGGGGCTTCSEESSSCC---
T ss_pred cccCCEEEccCCccccccChhhhhccceeehhhhccc
Confidence 9999999999999998888555788899999999986
No 50
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.95 E-value=2.3e-26 Score=259.23 Aligned_cols=258 Identities=26% Similarity=0.383 Sum_probs=145.5
Q ss_pred eeEEEEEcCCCcccccCCccCCCCCCCCEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEe
Q 004275 85 CHVTVILLKGFNLAGVIPEEFGNLTFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVL 164 (764)
Q Consensus 85 ~~v~~L~L~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 164 (764)
.+++.|+|++|.+.+..+ +..+++|++|++++|.+++..| ++++++|++|++++|.+++..+ +..+++|++|++
T Consensus 68 ~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l 141 (466)
T 1o6v_A 68 NNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLEL 141 (466)
T ss_dssp TTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCSEEEE
T ss_pred cCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcCCCCCCEEECCCCCCCCChH--HcCCCCCCEEEC
Confidence 468889999998876544 8889999999999999886544 8889999999999998885433 888899999999
Q ss_pred eCCcCCCCCCccCCCCCCCcEEEccCccCCCCCcccccCCCCCcEEEccCccCCCcCcccccCCCCCCEEeeeCCcCCCC
Q 004275 165 EDNQLVGPLPENLGNLKSLRRILLSSNNFTGSIPESYGNLKNLTEFRIDGSNLTGRIPNFIGNWTKLDRLDLQGTSLEGP 244 (764)
Q Consensus 165 s~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 244 (764)
++|.+.+ ++ .+.++++|+.|+++ |.+.+.. .+.++++|++|++++|.+++. ..+..+++|++|++++|.+++.
T Consensus 142 ~~n~l~~-~~-~~~~l~~L~~L~l~-~~~~~~~--~~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~ 214 (466)
T 1o6v_A 142 SSNTISD-IS-ALSGLTSLQQLSFG-NQVTDLK--PLANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDI 214 (466)
T ss_dssp EEEEECC-CG-GGTTCTTCSEEEEE-ESCCCCG--GGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCC
T ss_pred CCCccCC-Ch-hhccCCcccEeecC-CcccCch--hhccCCCCCEEECcCCcCCCC--hhhccCCCCCEEEecCCccccc
Confidence 9888875 33 35555555555553 2332211 144555555555555554432 1244455555555555555443
Q ss_pred CccchhcCCCCCEEEcCCCCCCCCCCCCccCCccccccccccccccccCCccccCCCCCCEEeccCCCCCCCccccccCC
Q 004275 245 IPSTISQLKNLTELRISDLKGSSSSFPNLQDMKKMERLILRNCLITGRIPEYIEDMTDLKILDLSFNQLTGPVPGILQNL 324 (764)
Q Consensus 245 ~p~~l~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l 324 (764)
.| ++.+++|+.|++++|.... ++.+..+++|+.|++++|.+++..| +..+++|++|++++|++++..+ +..+
T Consensus 215 ~~--~~~l~~L~~L~l~~n~l~~--~~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l 286 (466)
T 1o6v_A 215 TP--LGILTNLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGL 286 (466)
T ss_dssp GG--GGGCTTCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTC
T ss_pred cc--ccccCCCCEEECCCCCccc--chhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCC
Confidence 33 4444555555555443322 2334444445555555554443322 4444444444444444443322 4444
Q ss_pred CCCCEEeccCCcCcCCCChhhhcCCCeEEeecCcCCCCC
Q 004275 325 KKIDYIFLTNNSLSGTLPDWILTSEKNLDLSYNNFTESS 363 (764)
Q Consensus 325 ~~L~~L~L~~N~l~g~~p~~~~~~l~~L~Ls~N~l~~~~ 363 (764)
++|+.|++++|++++..|..-.+.++.|++++|++++.+
T Consensus 287 ~~L~~L~L~~n~l~~~~~~~~l~~L~~L~L~~n~l~~~~ 325 (466)
T 1o6v_A 287 TALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDIS 325 (466)
T ss_dssp TTCSEEECCSSCCSCCGGGGGCTTCSEEECCSSCCSCCG
T ss_pred CccCeEEcCCCcccCchhhcCCCCCCEEECcCCcCCCch
Confidence 444444444444444333222333444444444444443
No 51
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.95 E-value=3.4e-26 Score=257.89 Aligned_cols=276 Identities=26% Similarity=0.368 Sum_probs=230.2
Q ss_pred eeEEEEEcCCCcccccCCccCCCCCCCCEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEe
Q 004275 85 CHVTVILLKGFNLAGVIPEEFGNLTFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVL 164 (764)
Q Consensus 85 ~~v~~L~L~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 164 (764)
.+++.|++.++++.. +| .+..+++|++|||++|.+++..| +.++++|++|++++|.+++..| ++++++|++|+|
T Consensus 46 ~~l~~L~l~~~~i~~-l~-~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L 119 (466)
T 1o6v_A 46 DQVTTLQADRLGIKS-ID-GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTL 119 (466)
T ss_dssp HTCCEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEEC
T ss_pred ccccEEecCCCCCcc-Cc-chhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcCCCCCCEEEC
Confidence 468999999998875 45 48889999999999999986544 9999999999999999996555 999999999999
Q ss_pred eCCcCCCCCCccCCCCCCCcEEEccCccCCCCCcccccCCCCCcEEEccCccCCCcCcccccCCCCCCEEeeeCCcCCCC
Q 004275 165 EDNQLVGPLPENLGNLKSLRRILLSSNNFTGSIPESYGNLKNLTEFRIDGSNLTGRIPNFIGNWTKLDRLDLQGTSLEGP 244 (764)
Q Consensus 165 s~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 244 (764)
++|.+++..+ +.++++|++|++++|.+++ ++ .+..+++|++|+++ |.+.+.. .+.++++|+.|++++|.+++.
T Consensus 120 ~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~~-~~~~l~~L~~L~l~-~~~~~~~--~~~~l~~L~~L~l~~n~l~~~ 192 (466)
T 1o6v_A 120 FNNQITDIDP--LKNLTNLNRLELSSNTISD-IS-ALSGLTSLQQLSFG-NQVTDLK--PLANLTTLERLDISSNKVSDI 192 (466)
T ss_dssp CSSCCCCCGG--GTTCTTCSEEEEEEEEECC-CG-GGTTCTTCSEEEEE-ESCCCCG--GGTTCTTCCEEECCSSCCCCC
T ss_pred CCCCCCCChH--HcCCCCCCEEECCCCccCC-Ch-hhccCCcccEeecC-CcccCch--hhccCCCCCEEECcCCcCCCC
Confidence 9999986543 8999999999999999985 44 48999999999996 5665443 389999999999999999864
Q ss_pred CccchhcCCCCCEEEcCCCCCCCCCCCCccCCccccccccccccccccCCccccCCCCCCEEeccCCCCCCCccccccCC
Q 004275 245 IPSTISQLKNLTELRISDLKGSSSSFPNLQDMKKMERLILRNCLITGRIPEYIEDMTDLKILDLSFNQLTGPVPGILQNL 324 (764)
Q Consensus 245 ~p~~l~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l 324 (764)
..+..+++|++|++++|.... .+.+..+++|+.|++++|.+++. ..+..+++|+.|++++|++++..| +..+
T Consensus 193 --~~l~~l~~L~~L~l~~n~l~~--~~~~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l 264 (466)
T 1o6v_A 193 --SVLAKLTNLESLIATNNQISD--ITPLGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGL 264 (466)
T ss_dssp --GGGGGCTTCSEEECCSSCCCC--CGGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTC
T ss_pred --hhhccCCCCCEEEecCCcccc--cccccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcC
Confidence 358999999999999976543 23378899999999999999854 357889999999999999997666 8899
Q ss_pred CCCCEEeccCCcCcCCCChhhhcCCCeEEeecCcCCCCCCcc-cccc-cceeeccccCC
Q 004275 325 KKIDYIFLTNNSLSGTLPDWILTSEKNLDLSYNNFTESSPAT-CRES-RVNILSSFSST 381 (764)
Q Consensus 325 ~~L~~L~L~~N~l~g~~p~~~~~~l~~L~Ls~N~l~~~~p~~-~~~~-~l~~~~~~~~~ 381 (764)
++|+.|++++|.+++..+-.-.+.++.|++++|++++.+|-. +..+ .+++..|...+
T Consensus 265 ~~L~~L~l~~n~l~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~L~~n~l~~ 323 (466)
T 1o6v_A 265 TKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISD 323 (466)
T ss_dssp TTCSEEECCSSCCCCCGGGTTCTTCSEEECCSSCCSCCGGGGGCTTCSEEECCSSCCSC
T ss_pred CCCCEEECCCCccCccccccCCCccCeEEcCCCcccCchhhcCCCCCCEEECcCCcCCC
Confidence 999999999999998666444677899999999999976632 4444 46666665444
No 52
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=6.4e-29 Score=264.90 Aligned_cols=241 Identities=17% Similarity=0.244 Sum_probs=106.3
Q ss_pred EEEEcCCCcccccCCccCCCCCCCCEEEccCCcC-CccCchhhh-------cCCCCcEEecccCcCcccCCcCc--CCCC
Q 004275 88 TVILLKGFNLAGVIPEEFGNLTFLQEVDLSRNYF-NGSLPKSFA-------RLQNLTKLLILGNRLSGSIPLEI--GDIS 157 (764)
Q Consensus 88 ~~L~L~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l-~~~~p~~~~-------~l~~L~~L~Ls~n~l~~~~p~~~--~~l~ 157 (764)
+.+++++|.+ .+|..+... |++|+|++|.+ .+.+|..+. ++++|++|+|++|.+++.+|..+ +.++
T Consensus 46 ~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~ 121 (312)
T 1wwl_A 46 EYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEATGP 121 (312)
T ss_dssp TTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSSSCCSC
T ss_pred eeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHHHhcCC
Confidence 3344444444 344433322 44445555544 233444333 44555555555555554444443 4455
Q ss_pred CCCEEEeeCCcCCCCCCccCCCC-----CCCcEEEccCccCCCCCcccccCCCCCcEEEccCccCCCc--Ccccc--cCC
Q 004275 158 TLEELVLEDNQLVGPLPENLGNL-----KSLRRILLSSNNFTGSIPESYGNLKNLTEFRIDGSNLTGR--IPNFI--GNW 228 (764)
Q Consensus 158 ~L~~L~Ls~N~l~~~~p~~l~~l-----~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~--~p~~~--~~l 228 (764)
+|++|+|++|++++. |..+..+ ++|++|+|++|++++..|..++.+++|++|++++|++.+. +|..+ ..+
T Consensus 122 ~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l 200 (312)
T 1wwl_A 122 DLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKF 200 (312)
T ss_dssp CCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTTSC
T ss_pred CccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhccC
Confidence 555555555555443 4444433 4555555555555444444455555555555555554433 12222 444
Q ss_pred CCCCEEeeeCCcCCCC--Cc-cchhcCCCCCEEEcCCCCCCCCC-CCCccCCccccccccccccccccCCccccCCCCCC
Q 004275 229 TKLDRLDLQGTSLEGP--IP-STISQLKNLTELRISDLKGSSSS-FPNLQDMKKMERLILRNCLITGRIPEYIEDMTDLK 304 (764)
Q Consensus 229 ~~L~~L~L~~N~l~~~--~p-~~l~~l~~L~~L~L~~n~~~~~~-~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 304 (764)
++|++|++++|++++. ++ ..+..+++|++|++++|.+.... .+.+..+++|++|++++|+++ .+|..+. ++|+
T Consensus 201 ~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~--~~L~ 277 (312)
T 1wwl_A 201 PTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP--AKLS 277 (312)
T ss_dssp TTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC--SEEE
T ss_pred CCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc--CCce
Confidence 5555555555554421 11 12233444444444443333222 122333444444444444444 3333333 4444
Q ss_pred EEeccCCCCCCCccccccCCCCCCEEeccCCcCc
Q 004275 305 ILDLSFNQLTGPVPGILQNLKKIDYIFLTNNSLS 338 (764)
Q Consensus 305 ~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~ 338 (764)
+|++++|++++. |. +..+++|++|++++|+++
T Consensus 278 ~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~ 309 (312)
T 1wwl_A 278 VLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFL 309 (312)
T ss_dssp EEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTT
T ss_pred EEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCC
Confidence 444444444433 32 444444444444444443
No 53
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.95 E-value=1.2e-26 Score=259.63 Aligned_cols=247 Identities=19% Similarity=0.230 Sum_probs=190.4
Q ss_pred EEEcCCCcccccCCccCCCCCCCCEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEeeCCc
Q 004275 89 VILLKGFNLAGVIPEEFGNLTFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVLEDNQ 168 (764)
Q Consensus 89 ~L~L~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~ 168 (764)
.++.++.++. .+|..+. +++++|+|++|++++..+..|.++++|++|+|++|.+++..+..|.++++|++|+|++|+
T Consensus 47 ~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~ 123 (440)
T 3zyj_A 47 KVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNR 123 (440)
T ss_dssp EEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSC
T ss_pred EEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCc
Confidence 3445555554 4566554 678999999999988888889999999999999999987777889999999999999999
Q ss_pred CCCCCCccCCCCCCCcEEEccCccCCCCCcccccCCCCCcEEEccCccCCCcC-cccccCCCCCCEEeeeCCcCCCCCcc
Q 004275 169 LVGPLPENLGNLKSLRRILLSSNNFTGSIPESYGNLKNLTEFRIDGSNLTGRI-PNFIGNWTKLDRLDLQGTSLEGPIPS 247 (764)
Q Consensus 169 l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~p~ 247 (764)
+++..+..|..+++|++|+|++|+++...+..|..+++|++|++++|+..+.+ +..|..+++|++|++++|+++. +|
T Consensus 124 l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~- 201 (440)
T 3zyj_A 124 LTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLRE-IP- 201 (440)
T ss_dssp CSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSS-CC-
T ss_pred CCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCcc-cc-
Confidence 98766667889999999999999998777778888899999999885443344 4467888888888888888873 44
Q ss_pred chhcCCCCCEEEcCCCCCCCCCCCCccCCccccccccccccccccCCccccCCCCCCEEeccCCCCCCCccccccCCCCC
Q 004275 248 TISQLKNLTELRISDLKGSSSSFPNLQDMKKMERLILRNCLITGRIPEYIEDMTDLKILDLSFNQLTGPVPGILQNLKKI 327 (764)
Q Consensus 248 ~l~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L 327 (764)
.+..+++|+.|++++|.+.......+..+++|+.|++++|++++..+..|..+++|++|+|++|++++..+..+..+++|
T Consensus 202 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 281 (440)
T 3zyj_A 202 NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHL 281 (440)
T ss_dssp CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTC
T ss_pred ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCC
Confidence 36777777777777765554444456677777777777777777777777777777777777777776666677777777
Q ss_pred CEEeccCCcCcCC
Q 004275 328 DYIFLTNNSLSGT 340 (764)
Q Consensus 328 ~~L~L~~N~l~g~ 340 (764)
+.|+|++|++...
T Consensus 282 ~~L~L~~Np~~Cd 294 (440)
T 3zyj_A 282 ERIHLHHNPWNCN 294 (440)
T ss_dssp CEEECCSSCEECS
T ss_pred CEEEcCCCCccCC
Confidence 7777777777644
No 54
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.94 E-value=7.3e-27 Score=261.74 Aligned_cols=264 Identities=23% Similarity=0.283 Sum_probs=196.6
Q ss_pred eeEEEEEcCCCcccccCCccCCCCCCCCEEEccCCcCCccCchhhhcCCCC-------------cEEecccCcCcccCCc
Q 004275 85 CHVTVILLKGFNLAGVIPEEFGNLTFLQEVDLSRNYFNGSLPKSFARLQNL-------------TKLLILGNRLSGSIPL 151 (764)
Q Consensus 85 ~~v~~L~L~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L-------------~~L~Ls~n~l~~~~p~ 151 (764)
.++++|+++++++ |.+|+++++|++|++|++++|.+.|.+|..++++++| ++|++++|.+++ +|.
T Consensus 11 ~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~-lp~ 88 (454)
T 1jl5_A 11 TFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSS-LPE 88 (454)
T ss_dssp ------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSC-CCS
T ss_pred ccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCcccc-CCC
Confidence 4799999999999 8999999999999999999999999999999998875 999999999985 554
Q ss_pred CcCCCCCCCEEEeeCCcCCCCCCccCCCCCCCcEEEccCccCCCCCcccccCCCCCcEEEccCccCCCcCcccccCCCCC
Q 004275 152 EIGDISTLEELVLEDNQLVGPLPENLGNLKSLRRILLSSNNFTGSIPESYGNLKNLTEFRIDGSNLTGRIPNFIGNWTKL 231 (764)
Q Consensus 152 ~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L 231 (764)
. .++|++|++++|.+++ +|.. +++|++|++++|++++ +|.. .++|++|++++|++++ +| .++++++|
T Consensus 89 ~---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~L 155 (454)
T 1jl5_A 89 L---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK-LP-ELQNSSFL 155 (454)
T ss_dssp C---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS-CC-CCTTCTTC
T ss_pred C---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC-Cc-ccCCCCCC
Confidence 2 4789999999999997 6754 4789999999999985 3322 2689999999999996 77 59999999
Q ss_pred CEEeeeCCcCCCCCccchhcCCCCCEEEcCCCCCCCCCCCCccCCccccccccccccccccCCccccCCCCCCEEeccCC
Q 004275 232 DRLDLQGTSLEGPIPSTISQLKNLTELRISDLKGSSSSFPNLQDMKKMERLILRNCLITGRIPEYIEDMTDLKILDLSFN 311 (764)
Q Consensus 232 ~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 311 (764)
++|++++|++++ +|..+ ++|++|++++|++.. +|.+..+++|++|++++|++++ +|... ++|++|++++|
T Consensus 156 ~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~--l~~~~~l~~L~~L~l~~N~l~~-l~~~~---~~L~~L~l~~n 225 (454)
T 1jl5_A 156 KIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE--LPELQNLPFLTAIYADNNSLKK-LPDLP---LSLESIVAGNN 225 (454)
T ss_dssp CEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS--CCCCTTCTTCCEEECCSSCCSS-CCCCC---TTCCEEECCSS
T ss_pred CEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc--CccccCCCCCCEEECCCCcCCc-CCCCc---CcccEEECcCC
Confidence 999999999986 56543 589999999976654 5678999999999999999985 55433 58999999999
Q ss_pred CCCCCccccccCCCCCCEEeccCCcCcCCCChhhhcCCCeEEeecCcCCCCCCcccccc-cceeeccc
Q 004275 312 QLTGPVPGILQNLKKIDYIFLTNNSLSGTLPDWILTSEKNLDLSYNNFTESSPATCRES-RVNILSSF 378 (764)
Q Consensus 312 ~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~l~~L~Ls~N~l~~~~p~~~~~~-~l~~~~~~ 378 (764)
+++ .+|. +..+++|++|++++|++++ +|.. ...++.|++++|++++.++ ....+ .+++..|.
T Consensus 226 ~l~-~lp~-~~~l~~L~~L~l~~N~l~~-l~~~-~~~L~~L~l~~N~l~~l~~-~~~~L~~L~ls~N~ 288 (454)
T 1jl5_A 226 ILE-ELPE-LQNLPFLTTIYADNNLLKT-LPDL-PPSLEALNVRDNYLTDLPE-LPQSLTFLDVSENI 288 (454)
T ss_dssp CCS-SCCC-CTTCTTCCEEECCSSCCSS-CCSC-CTTCCEEECCSSCCSCCCC-CCTTCCEEECCSSC
T ss_pred cCC-cccc-cCCCCCCCEEECCCCcCCc-cccc-ccccCEEECCCCcccccCc-ccCcCCEEECcCCc
Confidence 998 6774 8899999999999999986 5543 4678899999999998543 33333 35555553
No 55
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.94 E-value=6.9e-26 Score=264.85 Aligned_cols=156 Identities=21% Similarity=0.277 Sum_probs=136.0
Q ss_pred EcCCCcccccCCccCCCCCCCCEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEeeCCcCC
Q 004275 91 LLKGFNLAGVIPEEFGNLTFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVLEDNQLV 170 (764)
Q Consensus 91 ~L~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 170 (764)
+-++.+++ .+|..+. +.+++|||++|+|++..|.+|.++++|++|+|++|++++..|..|.++++|++|+|++|+++
T Consensus 37 ~c~~~~l~-~vP~~lp--~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~ 113 (635)
T 4g8a_A 37 QCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQ 113 (635)
T ss_dssp ECTTSCCS-SCCSSSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCC
T ss_pred ECCCCCcC-ccCCCCC--cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCC
Confidence 34445555 4666553 47999999999999888889999999999999999999888888999999999999999999
Q ss_pred CCCCccCCCCCCCcEEEccCccCCCCCcccccCCCCCcEEEccCccCCC-cCcccccCCCCCCEEeeeCCcCCCCCccch
Q 004275 171 GPLPENLGNLKSLRRILLSSNNFTGSIPESYGNLKNLTEFRIDGSNLTG-RIPNFIGNWTKLDRLDLQGTSLEGPIPSTI 249 (764)
Q Consensus 171 ~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l 249 (764)
+..+..|.++++|++|+|++|++++..+..|+++++|++|++++|.+++ .+|..++.+++|++|++++|++++..|..+
T Consensus 114 ~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l 193 (635)
T 4g8a_A 114 SLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDL 193 (635)
T ss_dssp EECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGG
T ss_pred CCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccc
Confidence 7777789999999999999999998777889999999999999999976 468889999999999999998876554433
No 56
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.94 E-value=2.8e-26 Score=257.53 Aligned_cols=247 Identities=21% Similarity=0.186 Sum_probs=219.6
Q ss_pred CCEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEeeCCcCCCCCCccCCCCCCCcEEEccC
Q 004275 111 LQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVLEDNQLVGPLPENLGNLKSLRRILLSS 190 (764)
Q Consensus 111 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~ 190 (764)
.+.++.+++.++ .+|..+. ++|++|+|++|.+++..|..|.++++|++|+|++|++++..|..|.++++|++|+|++
T Consensus 56 ~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~ 132 (452)
T 3zyi_A 56 FSKVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFD 132 (452)
T ss_dssp SCEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CcEEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCC
Confidence 456788888887 5776554 7899999999999998899999999999999999999988889999999999999999
Q ss_pred ccCCCCCcccccCCCCCcEEEccCccCCCcCcccccCCCCCCEEeeeCCc-CCCCCccchhcCCCCCEEEcCCCCCCCCC
Q 004275 191 NNFTGSIPESYGNLKNLTEFRIDGSNLTGRIPNFIGNWTKLDRLDLQGTS-LEGPIPSTISQLKNLTELRISDLKGSSSS 269 (764)
Q Consensus 191 N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~l~~l~~L~~L~L~~n~~~~~~ 269 (764)
|++++..+..|..+++|++|++++|.++...+..+.++++|++|++++|+ +....+..+..+++|++|++++|++..
T Consensus 133 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-- 210 (452)
T 3zyi_A 133 NWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD-- 210 (452)
T ss_dssp SCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS--
T ss_pred CcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccc--
Confidence 99998777889999999999999999997777789999999999999954 544444578999999999999977653
Q ss_pred CCCccCCccccccccccccccccCCccccCCCCCCEEeccCCCCCCCccccccCCCCCCEEeccCCcCcCCCChhh--hc
Q 004275 270 FPNLQDMKKMERLILRNCLITGRIPEYIEDMTDLKILDLSFNQLTGPVPGILQNLKKIDYIFLTNNSLSGTLPDWI--LT 347 (764)
Q Consensus 270 ~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~--~~ 347 (764)
+|.+..+++|+.|+|++|.+++..|..|..+++|+.|++++|++++..|..|..+++|+.|+|++|++++..+..+ .+
T Consensus 211 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 290 (452)
T 3zyi_A 211 MPNLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLR 290 (452)
T ss_dssp CCCCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCT
T ss_pred cccccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhcccc
Confidence 5778999999999999999999999999999999999999999999889999999999999999999996666555 46
Q ss_pred CCCeEEeecCcCCCC
Q 004275 348 SEKNLDLSYNNFTES 362 (764)
Q Consensus 348 ~l~~L~Ls~N~l~~~ 362 (764)
.++.|+|++|++...
T Consensus 291 ~L~~L~L~~Np~~Cd 305 (452)
T 3zyi_A 291 YLVELHLHHNPWNCD 305 (452)
T ss_dssp TCCEEECCSSCEECS
T ss_pred CCCEEEccCCCcCCC
Confidence 678999999987653
No 57
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.94 E-value=3.4e-26 Score=255.86 Aligned_cols=246 Identities=20% Similarity=0.197 Sum_probs=220.0
Q ss_pred CCEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEeeCCcCCCCCCccCCCCCCCcEEEccC
Q 004275 111 LQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVLEDNQLVGPLPENLGNLKSLRRILLSS 190 (764)
Q Consensus 111 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~ 190 (764)
.+.++.+++.++ .+|..+. ++++.|+|++|++++..+..|.++++|++|+|++|.+++..+..|.++++|++|+|++
T Consensus 45 ~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~ 121 (440)
T 3zyj_A 45 FSKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFD 121 (440)
T ss_dssp SCEEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCS
T ss_pred CCEEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCC
Confidence 456888888887 5777654 7899999999999988889999999999999999999988888999999999999999
Q ss_pred ccCCCCCcccccCCCCCcEEEccCccCCCcCcccccCCCCCCEEeeeCCc-CCCCCccchhcCCCCCEEEcCCCCCCCCC
Q 004275 191 NNFTGSIPESYGNLKNLTEFRIDGSNLTGRIPNFIGNWTKLDRLDLQGTS-LEGPIPSTISQLKNLTELRISDLKGSSSS 269 (764)
Q Consensus 191 N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~l~~l~~L~~L~L~~n~~~~~~ 269 (764)
|+++...+..|..+++|++|++++|.++...+..|..+++|++|++++|+ +....+..|..+++|++|++++|++. .
T Consensus 122 n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~--~ 199 (440)
T 3zyj_A 122 NRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR--E 199 (440)
T ss_dssp SCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS--S
T ss_pred CcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc--c
Confidence 99997777789999999999999999998777899999999999999955 44444557999999999999997765 5
Q ss_pred CCCccCCccccccccccccccccCCccccCCCCCCEEeccCCCCCCCccccccCCCCCCEEeccCCcCcCCCChhh--hc
Q 004275 270 FPNLQDMKKMERLILRNCLITGRIPEYIEDMTDLKILDLSFNQLTGPVPGILQNLKKIDYIFLTNNSLSGTLPDWI--LT 347 (764)
Q Consensus 270 ~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~--~~ 347 (764)
+|.+..+++|++|+|++|++++..|..|..+++|+.|++++|++++..+..|..+++|+.|+|++|++++..+..+ .+
T Consensus 200 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 279 (440)
T 3zyj_A 200 IPNLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLH 279 (440)
T ss_dssp CCCCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCT
T ss_pred ccccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhcccc
Confidence 6778999999999999999999999999999999999999999999889999999999999999999997666655 46
Q ss_pred CCCeEEeecCcCCC
Q 004275 348 SEKNLDLSYNNFTE 361 (764)
Q Consensus 348 ~l~~L~Ls~N~l~~ 361 (764)
.++.|+|++|++..
T Consensus 280 ~L~~L~L~~Np~~C 293 (440)
T 3zyj_A 280 HLERIHLHHNPWNC 293 (440)
T ss_dssp TCCEEECCSSCEEC
T ss_pred CCCEEEcCCCCccC
Confidence 67899999998864
No 58
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.94 E-value=7.6e-27 Score=245.42 Aligned_cols=236 Identities=19% Similarity=0.204 Sum_probs=190.5
Q ss_pred eeEEEEEcCCCcccccCCccCCCCCCCCEEEccCCcCCccCchhhhcCCCCcEEecccCc-CcccCCcCcCCCCCCCEEE
Q 004275 85 CHVTVILLKGFNLAGVIPEEFGNLTFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNR-LSGSIPLEIGDISTLEELV 163 (764)
Q Consensus 85 ~~v~~L~L~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~-l~~~~p~~~~~l~~L~~L~ 163 (764)
.+++.|+++++.+.+..+..|..+++|++|+|++|.+++..|..|..+++|++|+|++|. +....|..+..+++|++|+
T Consensus 32 ~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~ 111 (285)
T 1ozn_A 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLH 111 (285)
T ss_dssp TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEE
T ss_pred CCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEE
Confidence 479999999999999888889999999999999999998889999999999999999998 7766688999999999999
Q ss_pred eeCCcCCCCCCccCCCCCCCcEEEccCccCCCCCcccccCCCCCcEEEccCccCCCcCcccccCCCCCCEEeeeCCcCCC
Q 004275 164 LEDNQLVGPLPENLGNLKSLRRILLSSNNFTGSIPESYGNLKNLTEFRIDGSNLTGRIPNFIGNWTKLDRLDLQGTSLEG 243 (764)
Q Consensus 164 Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 243 (764)
|++|.+++..|..+.++++|++|++++|++++..+..+..+++|++|++++|.+++..+..+..+++|++|++++|.+++
T Consensus 112 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 191 (285)
T 1ozn_A 112 LDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAH 191 (285)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCE
T ss_pred CCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccc
Confidence 99999998888899999999999999999998777789999999999999999997777789999999999999999998
Q ss_pred CCccchhcCCCCCEEEcCCCCCCCCCCCCccCCccccccccccccccccCCccccCCCCCCEEeccCCCCCCCccccccC
Q 004275 244 PIPSTISQLKNLTELRISDLKGSSSSFPNLQDMKKMERLILRNCLITGRIPEYIEDMTDLKILDLSFNQLTGPVPGILQN 323 (764)
Q Consensus 244 ~~p~~l~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ 323 (764)
..|..+..+++|+.|++++| .+++..+..+..+++|++|++++|.+....+.. .-
T Consensus 192 ~~~~~~~~l~~L~~L~l~~n------------------------~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~-~~ 246 (285)
T 1ozn_A 192 VHPHAFRDLGRLMTLYLFAN------------------------NLSALPTEALAPLRALQYLRLNDNPWVCDCRAR-PL 246 (285)
T ss_dssp ECTTTTTTCTTCCEEECCSS------------------------CCSCCCHHHHTTCTTCCEEECCSSCEECSGGGH-HH
T ss_pred cCHhHccCcccccEeeCCCC------------------------cCCcCCHHHcccCcccCEEeccCCCccCCCCcH-HH
Confidence 87877777777776666654 444333344556666666666666665433211 00
Q ss_pred CCCCCEEeccCCcCcCCCChhh
Q 004275 324 LKKIDYIFLTNNSLSGTLPDWI 345 (764)
Q Consensus 324 l~~L~~L~L~~N~l~g~~p~~~ 345 (764)
...++.+....+.+.+..|..+
T Consensus 247 ~~~l~~~~~~~~~~~c~~p~~l 268 (285)
T 1ozn_A 247 WAWLQKFRGSSSEVPCSLPQRL 268 (285)
T ss_dssp HHHHHHCCSEECCCBEEESGGG
T ss_pred HHHHHhcccccCccccCCchHh
Confidence 1112233355566666666554
No 59
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.94 E-value=3.3e-28 Score=260.03 Aligned_cols=271 Identities=16% Similarity=0.138 Sum_probs=228.0
Q ss_pred eEEEEEcCCCcccccCCccCCCCCCCCEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEee
Q 004275 86 HVTVILLKGFNLAGVIPEEFGNLTFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVLE 165 (764)
Q Consensus 86 ~v~~L~L~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls 165 (764)
+++..+++.+++...+...+..+++|++|+|++|.+++..|..|..+++|++|+|++|.+++..| +..+++|++|+|+
T Consensus 11 ~l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls 88 (317)
T 3o53_A 11 RYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLN 88 (317)
T ss_dssp EEEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECC
T ss_pred ceeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECc
Confidence 46667788888776666666778899999999999998888999999999999999999987665 8999999999999
Q ss_pred CCcCCCCCCccCCCCCCCcEEEccCccCCCCCcccccCCCCCcEEEccCccCCCcCcccccCCCCCCEEeeeCCcCCCCC
Q 004275 166 DNQLVGPLPENLGNLKSLRRILLSSNNFTGSIPESYGNLKNLTEFRIDGSNLTGRIPNFIGNWTKLDRLDLQGTSLEGPI 245 (764)
Q Consensus 166 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 245 (764)
+|++++.. ..++|++|++++|++++..+. .+++|++|++++|.+++..+..+..+++|++|++++|.+++..
T Consensus 89 ~n~l~~l~-----~~~~L~~L~l~~n~l~~~~~~---~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 160 (317)
T 3o53_A 89 NNYVQELL-----VGPSIETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVN 160 (317)
T ss_dssp SSEEEEEE-----ECTTCCEEECCSSCCSEEEEC---CCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEE
T ss_pred CCcccccc-----CCCCcCEEECCCCccCCcCcc---ccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCccc
Confidence 99988532 348999999999999876544 3688999999999999888889999999999999999999877
Q ss_pred ccch-hcCCCCCEEEcCCCCCCCCCCCCccCCccccccccccccccccCCccccCCCCCCEEeccCCCCCCCccccccCC
Q 004275 246 PSTI-SQLKNLTELRISDLKGSSSSFPNLQDMKKMERLILRNCLITGRIPEYIEDMTDLKILDLSFNQLTGPVPGILQNL 324 (764)
Q Consensus 246 p~~l-~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l 324 (764)
|..+ ..+++|++|++++|.+... +....+++|++|++++|++++. |..+..+++|++|++++|+++ .+|..+..+
T Consensus 161 ~~~~~~~l~~L~~L~L~~N~l~~~--~~~~~l~~L~~L~Ls~N~l~~l-~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l 236 (317)
T 3o53_A 161 FAELAASSDTLEHLNLQYNFIYDV--KGQVVFAKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLV-LIEKALRFS 236 (317)
T ss_dssp GGGGGGGTTTCCEEECTTSCCCEE--ECCCCCTTCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCC-EECTTCCCC
T ss_pred HHHHhhccCcCCEEECCCCcCccc--ccccccccCCEEECCCCcCCcc-hhhhcccCcccEEECcCCccc-chhhHhhcC
Confidence 7776 4789999999999776543 4455689999999999999964 555889999999999999999 578889999
Q ss_pred CCCCEEeccCCcCc-CCCChhhhc--CCCeEEee-cCcCCCCCCcccccc
Q 004275 325 KKIDYIFLTNNSLS-GTLPDWILT--SEKNLDLS-YNNFTESSPATCRES 370 (764)
Q Consensus 325 ~~L~~L~L~~N~l~-g~~p~~~~~--~l~~L~Ls-~N~l~~~~p~~~~~~ 370 (764)
++|+.|++++|+++ +.+|.++.. .++.++++ .+.++|..|..|...
T Consensus 237 ~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~~~~~~~~ 286 (317)
T 3o53_A 237 QNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEEECTVP 286 (317)
T ss_dssp TTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSSSSCCCSST
T ss_pred CCCCEEEccCCCccCcCHHHHHhccccceEEECCCchhccCCchhccCCC
Confidence 99999999999999 666776633 35678887 566777777766543
No 60
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.94 E-value=4.8e-28 Score=258.14 Aligned_cols=249 Identities=21% Similarity=0.217 Sum_probs=210.9
Q ss_pred CCCCCCCCEEEccCCcCCccCchhhhcCCCCcEEecccCcC-cccCCcCcC-------CCCCCCEEEeeCCcCCCCCCcc
Q 004275 105 FGNLTFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRL-SGSIPLEIG-------DISTLEELVLEDNQLVGPLPEN 176 (764)
Q Consensus 105 l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l-~~~~p~~~~-------~l~~L~~L~Ls~N~l~~~~p~~ 176 (764)
++..++|++|++++|.+ .+|..+... |+.|+|++|.+ .+.+|..+. ++++|++|+|++|++++.+|..
T Consensus 39 ~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 114 (312)
T 1wwl_A 39 YGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPP 114 (312)
T ss_dssp EEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCC
T ss_pred EccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHH
Confidence 45567899999999999 788877765 99999999999 456777666 7999999999999999999998
Q ss_pred C--CCCCCCcEEEccCccCCCCCcccccCC-----CCCcEEEccCccCCCcCcccccCCCCCCEEeeeCCcCCCC--Ccc
Q 004275 177 L--GNLKSLRRILLSSNNFTGSIPESYGNL-----KNLTEFRIDGSNLTGRIPNFIGNWTKLDRLDLQGTSLEGP--IPS 247 (764)
Q Consensus 177 l--~~l~~L~~L~Ls~N~l~~~~p~~~~~l-----~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--~p~ 247 (764)
+ ..+++|++|+|++|++++. |..+..+ ++|++|++++|++++..|..++.+++|++|++++|++.+. .|.
T Consensus 115 ~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 193 (312)
T 1wwl_A 115 LLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLIS 193 (312)
T ss_dssp SSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHH
T ss_pred HHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHH
Confidence 6 8999999999999999987 8888877 9999999999999998889999999999999999998765 334
Q ss_pred ch--hcCCCCCEEEcCCCCCCCC-CCC--CccCCccccccccccccccccCC-ccccCCCCCCEEeccCCCCCCCccccc
Q 004275 248 TI--SQLKNLTELRISDLKGSSS-SFP--NLQDMKKMERLILRNCLITGRIP-EYIEDMTDLKILDLSFNQLTGPVPGIL 321 (764)
Q Consensus 248 ~l--~~l~~L~~L~L~~n~~~~~-~~~--~l~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~g~~p~~~ 321 (764)
.+ ..+++|++|++++|++... .++ .+..+++|++|++++|++++.+| ..+..+++|++|++++|+++ .+|..+
T Consensus 194 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~ 272 (312)
T 1wwl_A 194 ALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGL 272 (312)
T ss_dssp HSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSC
T ss_pred HHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhc
Confidence 44 8899999999999766521 111 13567899999999999998775 45667899999999999999 777766
Q ss_pred cCCCCCCEEeccCCcCcCCCChh-hhcCCCeEEeecCcCCCC
Q 004275 322 QNLKKIDYIFLTNNSLSGTLPDW-ILTSEKNLDLSYNNFTES 362 (764)
Q Consensus 322 ~~l~~L~~L~L~~N~l~g~~p~~-~~~~l~~L~Ls~N~l~~~ 362 (764)
. ++|++|++++|+|++. |.. -.+.++.|++++|++++.
T Consensus 273 ~--~~L~~L~Ls~N~l~~~-p~~~~l~~L~~L~L~~N~l~~~ 311 (312)
T 1wwl_A 273 P--AKLSVLDLSYNRLDRN-PSPDELPQVGNLSLKGNPFLDS 311 (312)
T ss_dssp C--SEEEEEECCSSCCCSC-CCTTTSCEEEEEECTTCTTTCC
T ss_pred c--CCceEEECCCCCCCCC-hhHhhCCCCCEEeccCCCCCCC
Confidence 6 8999999999999976 551 145667999999999864
No 61
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.93 E-value=8.5e-25 Score=244.95 Aligned_cols=321 Identities=23% Similarity=0.295 Sum_probs=200.5
Q ss_pred eeEEEEEcCCCcccccCCccCCCCCCCCEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEe
Q 004275 85 CHVTVILLKGFNLAGVIPEEFGNLTFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVL 164 (764)
Q Consensus 85 ~~v~~L~L~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 164 (764)
.+++.|++++|.+.+ +|.. +++|++|++++|.+++ +|.. .++|++|++++|.+++ +| +|+++++|++|++
T Consensus 91 ~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l 160 (454)
T 1jl5_A 91 PHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDV 160 (454)
T ss_dssp TTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEEC
T ss_pred CCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEEC
Confidence 357888888888877 5643 3778888888888875 3321 2688888888888885 67 5888888888888
Q ss_pred eCCcCCCCCCccCCCCCCCcEEEccCccCCCCCcccccCCCCCcEEEccCccCCCcCcccccCCCCCCEEeeeCCcCCCC
Q 004275 165 EDNQLVGPLPENLGNLKSLRRILLSSNNFTGSIPESYGNLKNLTEFRIDGSNLTGRIPNFIGNWTKLDRLDLQGTSLEGP 244 (764)
Q Consensus 165 s~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 244 (764)
++|++++ +|..+ ++|++|++++|++++ +| .++++++|++|++++|.+++ +|... ++|++|++++|.++ .
T Consensus 161 ~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~~---~~L~~L~l~~n~l~-~ 229 (454)
T 1jl5_A 161 DNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDLP---LSLESIVAGNNILE-E 229 (454)
T ss_dssp CSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCCC---TTCCEEECCSSCCS-S
T ss_pred CCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCCc---CcccEEECcCCcCC-c
Confidence 8888875 55443 478888888888886 55 58888888888888888875 44432 57888888888888 5
Q ss_pred CccchhcCCCCCEEEcCCCCCCCCCCCCccCCccccccccccccccccCCccccCCCCCCEEeccCCCCCCCccccccCC
Q 004275 245 IPSTISQLKNLTELRISDLKGSSSSFPNLQDMKKMERLILRNCLITGRIPEYIEDMTDLKILDLSFNQLTGPVPGILQNL 324 (764)
Q Consensus 245 ~p~~l~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l 324 (764)
+| .++.+++|++|++++|++.. +|. .+++|++|++++|++++ +|.. +++|++|++++|++++ +|.. .
T Consensus 230 lp-~~~~l~~L~~L~l~~N~l~~--l~~--~~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~-l~~~---~ 296 (454)
T 1jl5_A 230 LP-ELQNLPFLTTIYADNNLLKT--LPD--LPPSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSG-LSEL---P 296 (454)
T ss_dssp CC-CCTTCTTCCEEECCSSCCSS--CCS--CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSE-ESCC---C
T ss_pred cc-ccCCCCCCCEEECCCCcCCc--ccc--cccccCEEECCCCcccc-cCcc---cCcCCEEECcCCccCc-ccCc---C
Confidence 66 38888888888888866543 333 23788888888888885 5543 3788888888888886 2221 2
Q ss_pred CCCCEEeccCCcCcCCCChhhhcCCCeEEeecCcCCCCCCcccccc-cceeeccccCCCCCccccccccCCCCCccCCcc
Q 004275 325 KKIDYIFLTNNSLSGTLPDWILTSEKNLDLSYNNFTESSPATCRES-RVNILSSFSSTGSNSVSWCLKKDLPCPKEAKHY 403 (764)
Q Consensus 325 ~~L~~L~L~~N~l~g~~p~~~~~~l~~L~Ls~N~l~~~~p~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (764)
++|++|++++|++++ ++. +...++.|++++|++++. |..+..+ .+++..|... .+|. .+ .
T Consensus 297 ~~L~~L~l~~N~l~~-i~~-~~~~L~~L~Ls~N~l~~l-p~~~~~L~~L~L~~N~l~-~lp~--~l--------~----- 357 (454)
T 1jl5_A 297 PNLYYLNASSNEIRS-LCD-LPPSLEELNVSNNKLIEL-PALPPRLERLIASFNHLA-EVPE--LP--------Q----- 357 (454)
T ss_dssp TTCCEEECCSSCCSE-ECC-CCTTCCEEECCSSCCSCC-CCCCTTCCEEECCSSCCS-CCCC--CC--------T-----
T ss_pred CcCCEEECcCCcCCc-ccC-CcCcCCEEECCCCccccc-cccCCcCCEEECCCCccc-cccc--hh--------h-----
Confidence 578888888888875 332 234678999999999884 4444444 4666666443 3443 11 0
Q ss_pred eeEeecCCCCeeeccCcccc--cccCCCCcccceeCCceeeeccccccCCCCchhhhccccccccChhhHhh--hhcc
Q 004275 404 SLFINCGGSPTEFEENDYEE--DLNTQGPSNFGIVSDRWAYSSTGVYVGNESSKYLAANQYGLNVSGAEYYK--TARL 477 (764)
Q Consensus 404 ~~~~~~~~~~~~~~~n~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~ 477 (764)
.+ ..+++++|.+++ .+ |..+. .+.. .++. +.+|. .+.++..+++++|.+.+ .+|.
T Consensus 358 ~L------~~L~L~~N~l~~l~~i----p~~l~------~L~~-n~~~-~~i~~-~~~~L~~L~ls~N~l~~~~~iP~ 416 (454)
T 1jl5_A 358 NL------KQLHVEYNPLREFPDI----PESVE------DLRM-NSHL-AEVPE-LPQNLKQLHVETNPLREFPDIPE 416 (454)
T ss_dssp TC------CEEECCSSCCSSCCCC----CTTCC------EEEC-CC--------------------------------
T ss_pred hc------cEEECCCCCCCcCCCC----hHHHH------hhhh-cccc-ccccc-ccCcCCEEECCCCcCCccccchh
Confidence 12 456778888887 44 21111 0110 1111 11222 23567778888888876 5543
No 62
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.93 E-value=2.1e-26 Score=260.41 Aligned_cols=227 Identities=18% Similarity=0.150 Sum_probs=189.1
Q ss_pred CCCCCCCCEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEeeCCcCCCCCCccCCCCCCCc
Q 004275 105 FGNLTFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVLEDNQLVGPLPENLGNLKSLR 184 (764)
Q Consensus 105 l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~ 184 (764)
...+++|++|+|++|.+++..|..|+.+++|++|+|++|.+++..| ++.+++|++|+|++|.+++..+ .++|+
T Consensus 30 ~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~ 102 (487)
T 3oja_A 30 RQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIE 102 (487)
T ss_dssp STTGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCC
T ss_pred cccCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcC
Confidence 3445589999999999998888889999999999999999987665 8899999999999999875332 38899
Q ss_pred EEEccCccCCCCCcccccCCCCCcEEEccCccCCCcCcccccCCCCCCEEeeeCCcCCCCCccchh-cCCCCCEEEcCCC
Q 004275 185 RILLSSNNFTGSIPESYGNLKNLTEFRIDGSNLTGRIPNFIGNWTKLDRLDLQGTSLEGPIPSTIS-QLKNLTELRISDL 263 (764)
Q Consensus 185 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~-~l~~L~~L~L~~n 263 (764)
+|++++|.+++..+. .+++|+.|++++|.+++..|..++.+++|+.|+|++|.+++.+|..+. .+++|+.|++++|
T Consensus 103 ~L~L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N 179 (487)
T 3oja_A 103 TLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYN 179 (487)
T ss_dssp EEECCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTS
T ss_pred EEECcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCC
Confidence 999999999876554 457899999999999988888889999999999999999988888776 7899999999987
Q ss_pred CCCCCCCCCccCCccccccccccccccccCCccccCCCCCCEEeccCCCCCCCccccccCCCCCCEEeccCCcCc-CCCC
Q 004275 264 KGSSSSFPNLQDMKKMERLILRNCLITGRIPEYIEDMTDLKILDLSFNQLTGPVPGILQNLKKIDYIFLTNNSLS-GTLP 342 (764)
Q Consensus 264 ~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~-g~~p 342 (764)
.+... +....+++|+.|+|++|.+++..| .+..+++|+.|++++|.+++ +|..+..+++|+.|++++|.+. +.+|
T Consensus 180 ~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~ 255 (487)
T 3oja_A 180 FIYDV--KGQVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLR 255 (487)
T ss_dssp CCCEE--ECCCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHH
T ss_pred ccccc--cccccCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchH
Confidence 65433 445568899999999999996544 48888999999999999985 7777888999999999999988 5566
Q ss_pred hhh
Q 004275 343 DWI 345 (764)
Q Consensus 343 ~~~ 345 (764)
.++
T Consensus 256 ~~~ 258 (487)
T 3oja_A 256 DFF 258 (487)
T ss_dssp HHH
T ss_pred HHH
Confidence 555
No 63
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.92 E-value=1.4e-24 Score=226.96 Aligned_cols=220 Identities=23% Similarity=0.283 Sum_probs=177.0
Q ss_pred cCCccCCCCCCCCEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEeeCCcCCCCCCccCCC
Q 004275 100 VIPEEFGNLTFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVLEDNQLVGPLPENLGN 179 (764)
Q Consensus 100 ~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~ 179 (764)
.+|..+. ++|++|+|++|.+++..+..|.++++|++|+|++|.+++..+..|..+++|++|+|++|.+++..+..|.+
T Consensus 21 ~ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 98 (276)
T 2z62_A 21 KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSG 98 (276)
T ss_dssp SCCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTT
T ss_pred ccCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcC
Confidence 3555543 57999999999998877778999999999999999998777778999999999999999998877788999
Q ss_pred CCCCcEEEccCccCCCCCcccccCCCCCcEEEccCccCCCc-CcccccCCCCCCEEeeeCCcCCCCCccchhcCCCCCEE
Q 004275 180 LKSLRRILLSSNNFTGSIPESYGNLKNLTEFRIDGSNLTGR-IPNFIGNWTKLDRLDLQGTSLEGPIPSTISQLKNLTEL 258 (764)
Q Consensus 180 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L 258 (764)
+++|++|++++|++++..+..+..+++|++|++++|.+++. +|..+..+++|++|++++|++++..+..+..+++|+.|
T Consensus 99 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l 178 (276)
T 2z62_A 99 LSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLL 178 (276)
T ss_dssp CTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTC
T ss_pred CccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhcccc
Confidence 99999999999999877776788889999999999988763 58888888889999998888887666666665555422
Q ss_pred EcCCCCCCCCCCCCccCCccccccccccccccccCCccccCCCCCCEEeccCCCCCCCccccccCCCCCCEEeccCCcCc
Q 004275 259 RISDLKGSSSSFPNLQDMKKMERLILRNCLITGRIPEYIEDMTDLKILDLSFNQLTGPVPGILQNLKKIDYIFLTNNSLS 338 (764)
Q Consensus 259 ~L~~n~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~ 338 (764)
.+ .|++++|.+++..+..+. ..+|++|++++|++++..+..+..+++|+.|++++|+++
T Consensus 179 ~l--------------------~L~ls~n~l~~~~~~~~~-~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~ 237 (276)
T 2z62_A 179 NL--------------------SLDLSLNPMNFIQPGAFK-EIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWD 237 (276)
T ss_dssp CE--------------------EEECCSSCCCEECTTSSC-SCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBC
T ss_pred ce--------------------eeecCCCcccccCccccC-CCcccEEECCCCceeecCHhHhcccccccEEEccCCccc
Confidence 11 466777777755554443 358999999999998777777888889998888888888
Q ss_pred CCCC
Q 004275 339 GTLP 342 (764)
Q Consensus 339 g~~p 342 (764)
+..|
T Consensus 238 c~c~ 241 (276)
T 2z62_A 238 CSCP 241 (276)
T ss_dssp CCTT
T ss_pred ccCC
Confidence 7665
No 64
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.92 E-value=4.5e-24 Score=222.43 Aligned_cols=213 Identities=21% Similarity=0.273 Sum_probs=160.2
Q ss_pred CCceeccCCCCCCceeeEEEEEcCCCcccccCCccCCCCCCCCEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccC
Q 004275 70 GSNFTCDCTYSNNTVCHVTVILLKGFNLAGVIPEEFGNLTFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSI 149 (764)
Q Consensus 70 ~~gv~C~~~~~~~~~~~v~~L~L~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~ 149 (764)
|.|+.|.|.. ..+.+++++++++. +|..+. +.|++|+|++|.+++..+..|.++++|++|+|++|.++...
T Consensus 7 ~~~~~C~c~~------~~~~l~~~~~~l~~-ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~ 77 (270)
T 2o6q_A 7 KDGGVCSCNN------NKNSVDCSSKKLTA-IPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLP 77 (270)
T ss_dssp GGTCSBEEET------TTTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCC
T ss_pred CCCCCCEeCC------CCCEEEccCCCCCc-cCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeC
Confidence 8899998742 35678899988874 666554 67899999999998776778888999999999999888555
Q ss_pred CcCcCCCCCCCEEEeeCCcCCCCCCccCCCCCCCcEEEccCccCCCCCcccccCCCCCcEEEccCccCCCcCcccccCCC
Q 004275 150 PLEIGDISTLEELVLEDNQLVGPLPENLGNLKSLRRILLSSNNFTGSIPESYGNLKNLTEFRIDGSNLTGRIPNFIGNWT 229 (764)
Q Consensus 150 p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~ 229 (764)
+..|..+++|++|+|++|.+++..+..|.++++|++|++++|++++..+..|..+++|++|++++|.+++..+..+..++
T Consensus 78 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~ 157 (270)
T 2o6q_A 78 AGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLT 157 (270)
T ss_dssp TTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCT
T ss_pred hhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCc
Confidence 55668888888888888888876666778888888888888888877677777778888888887777765555677777
Q ss_pred CCCEEeeeCCcCCCCCccchhcCCCCCEEEcCCCCCCCCCCCCccCCccccccccccccccccCCccccCCCCCCEEecc
Q 004275 230 KLDRLDLQGTSLEGPIPSTISQLKNLTELRISDLKGSSSSFPNLQDMKKMERLILRNCLITGRIPEYIEDMTDLKILDLS 309 (764)
Q Consensus 230 ~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 309 (764)
+|++|++++|++++..+..|..++ +|++|++++|++++..+..+..+++|+.|+++
T Consensus 158 ~L~~L~L~~n~l~~~~~~~~~~l~------------------------~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~ 213 (270)
T 2o6q_A 158 SLKELRLYNNQLKRVPEGAFDKLT------------------------ELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQ 213 (270)
T ss_dssp TCCEEECCSSCCSCCCTTTTTTCT------------------------TCCEEECCSSCCSCCCTTTTTTCTTCCEEECC
T ss_pred ccceeEecCCcCcEeChhHhccCC------------------------CcCEEECCCCcCCcCCHHHhccccCCCEEEec
Confidence 777777777777655444444444 45555555566665555567778888888888
Q ss_pred CCCCCC
Q 004275 310 FNQLTG 315 (764)
Q Consensus 310 ~N~l~g 315 (764)
+|.+..
T Consensus 214 ~N~~~c 219 (270)
T 2o6q_A 214 ENPWDC 219 (270)
T ss_dssp SSCBCC
T ss_pred CCCeeC
Confidence 888764
No 65
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.91 E-value=4.7e-26 Score=243.29 Aligned_cols=245 Identities=18% Similarity=0.168 Sum_probs=212.4
Q ss_pred eeEEEEEcCCCcccccCCccCCCCCCCCEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEe
Q 004275 85 CHVTVILLKGFNLAGVIPEEFGNLTFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVL 164 (764)
Q Consensus 85 ~~v~~L~L~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 164 (764)
.+++.|+|++|.+.+..|..|..+++|++|+|++|.+++..| +..+++|++|+|++|.+++.. ..++|++|++
T Consensus 34 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~l~-----~~~~L~~L~l 106 (317)
T 3o53_A 34 WNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELL-----VGPSIETLHA 106 (317)
T ss_dssp GGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEEEE-----ECTTCCEEEC
T ss_pred CCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCcccccc-----CCCCcCEEEC
Confidence 369999999999999888899999999999999999987665 999999999999999998433 3489999999
Q ss_pred eCCcCCCCCCccCCCCCCCcEEEccCccCCCCCcccccCCCCCcEEEccCccCCCcCcccc-cCCCCCCEEeeeCCcCCC
Q 004275 165 EDNQLVGPLPENLGNLKSLRRILLSSNNFTGSIPESYGNLKNLTEFRIDGSNLTGRIPNFI-GNWTKLDRLDLQGTSLEG 243 (764)
Q Consensus 165 s~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~-~~l~~L~~L~L~~N~l~~ 243 (764)
++|++++..+. .+++|++|++++|++++..+..+..+++|++|++++|.+++..+..+ ..+++|++|++++|.+++
T Consensus 107 ~~n~l~~~~~~---~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~ 183 (317)
T 3o53_A 107 ANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYD 183 (317)
T ss_dssp CSSCCSEEEEC---CCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCE
T ss_pred CCCccCCcCcc---ccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCcc
Confidence 99999876544 36889999999999998888899999999999999999998777766 478999999999999986
Q ss_pred CCccchhcCCCCCEEEcCCCCCCCCCCCCccCCccccccccccccccccCCccccCCCCCCEEeccCCCCC-CCcccccc
Q 004275 244 PIPSTISQLKNLTELRISDLKGSSSSFPNLQDMKKMERLILRNCLITGRIPEYIEDMTDLKILDLSFNQLT-GPVPGILQ 322 (764)
Q Consensus 244 ~~p~~l~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-g~~p~~~~ 322 (764)
. | ....+++|++|++++|++.. ..+.+..+++|++|++++|+++ .+|..+..+++|+.|++++|.++ +.+|..+.
T Consensus 184 ~-~-~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~ 259 (317)
T 3o53_A 184 V-K-GQVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFS 259 (317)
T ss_dssp E-E-CCCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHH
T ss_pred c-c-cccccccCCEEECCCCcCCc-chhhhcccCcccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHh
Confidence 5 3 23458999999999976653 3344888999999999999999 57888999999999999999999 78889999
Q ss_pred CCCCCCEEecc-CCcCcCCCCh
Q 004275 323 NLKKIDYIFLT-NNSLSGTLPD 343 (764)
Q Consensus 323 ~l~~L~~L~L~-~N~l~g~~p~ 343 (764)
.+++|+.++++ .+.++|..|.
T Consensus 260 ~~~~L~~l~l~~~~~l~~~~~~ 281 (317)
T 3o53_A 260 KNQRVQTVAKQTVKKLTGQNEE 281 (317)
T ss_dssp TCHHHHHHHHHHHHHHHSSSSC
T ss_pred ccccceEEECCCchhccCCchh
Confidence 99999999999 4556665554
No 66
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.91 E-value=2.4e-25 Score=251.88 Aligned_cols=235 Identities=17% Similarity=0.157 Sum_probs=206.8
Q ss_pred eeEEEEEcCCCcccccCCccCCCCCCCCEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEe
Q 004275 85 CHVTVILLKGFNLAGVIPEEFGNLTFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVL 164 (764)
Q Consensus 85 ~~v~~L~L~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 164 (764)
.+++.|+|++|.+.+..|..|..+++|++|+|++|.+++..| |..+++|++|+|++|.+++..+ .++|++|+|
T Consensus 34 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L~L 106 (487)
T 3oja_A 34 WNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETLHA 106 (487)
T ss_dssp GGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEEEC
T ss_pred CCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEEEC
Confidence 379999999999999888899999999999999999997666 9999999999999999985432 389999999
Q ss_pred eCCcCCCCCCccCCCCCCCcEEEccCccCCCCCcccccCCCCCcEEEccCccCCCcCccccc-CCCCCCEEeeeCCcCCC
Q 004275 165 EDNQLVGPLPENLGNLKSLRRILLSSNNFTGSIPESYGNLKNLTEFRIDGSNLTGRIPNFIG-NWTKLDRLDLQGTSLEG 243 (764)
Q Consensus 165 s~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~-~l~~L~~L~L~~N~l~~ 243 (764)
++|.+++..+. .+++|+.|+|++|.+++..|..++.+++|++|++++|.+++..|..+. .+++|+.|+|++|.+++
T Consensus 107 ~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~ 183 (487)
T 3oja_A 107 ANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYD 183 (487)
T ss_dssp CSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCE
T ss_pred cCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCcccc
Confidence 99999976654 468899999999999998899999999999999999999998888886 79999999999999997
Q ss_pred CCccchhcCCCCCEEEcCCCCCCCCCCCCccCCccccccccccccccccCCccccCCCCCCEEeccCCCCC-CCcccccc
Q 004275 244 PIPSTISQLKNLTELRISDLKGSSSSFPNLQDMKKMERLILRNCLITGRIPEYIEDMTDLKILDLSFNQLT-GPVPGILQ 322 (764)
Q Consensus 244 ~~p~~l~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-g~~p~~~~ 322 (764)
..+ ...+++|+.|++++|.+. +..+.+..+++|+.|++++|.+++ +|..+..+++|+.|++++|.+. +.+|..+.
T Consensus 184 ~~~--~~~l~~L~~L~Ls~N~l~-~~~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~~~~ 259 (487)
T 3oja_A 184 VKG--QVVFAKLKTLDLSSNKLA-FMGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFFS 259 (487)
T ss_dssp EEC--CCCCTTCCEEECCSSCCC-EECGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHHHHT
T ss_pred ccc--cccCCCCCEEECCCCCCC-CCCHhHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHHHHH
Confidence 633 446999999999997655 344558889999999999999995 7878999999999999999998 67788888
Q ss_pred CCCCCCEEecc
Q 004275 323 NLKKIDYIFLT 333 (764)
Q Consensus 323 ~l~~L~~L~L~ 333 (764)
.++.|+.+++.
T Consensus 260 ~l~~L~~l~~~ 270 (487)
T 3oja_A 260 KNQRVQTVAKQ 270 (487)
T ss_dssp TCHHHHHHHHH
T ss_pred hCCCCcEEecc
Confidence 88877766664
No 67
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.90 E-value=1.1e-23 Score=243.51 Aligned_cols=236 Identities=25% Similarity=0.332 Sum_probs=164.4
Q ss_pred eEEEEEcCCCcccccCCccCCCCCCCCEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEee
Q 004275 86 HVTVILLKGFNLAGVIPEEFGNLTFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVLE 165 (764)
Q Consensus 86 ~v~~L~L~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls 165 (764)
.++.|++++++++ .+|..+. ++|++|+|++|.++ .+|. .+++|++|+|++|.++ .+|. .+++|++|+|+
T Consensus 41 ~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls 109 (622)
T 3g06_A 41 GNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLT-SLPV---LPPGLLELSIF 109 (622)
T ss_dssp CCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCS-CCCC---CCTTCCEEEEC
T ss_pred CCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCC-cCCC---CCCCCCEEECc
Confidence 4788899988887 6677665 78999999999887 4665 5788999999999887 4665 67888999999
Q ss_pred CCcCCCCCCccCCCCCCCcEEEccCccCCCCCcccccCCCCCcEEEccCccCCCcCcccccCCCCCCEEeeeCCcCCCCC
Q 004275 166 DNQLVGPLPENLGNLKSLRRILLSSNNFTGSIPESYGNLKNLTEFRIDGSNLTGRIPNFIGNWTKLDRLDLQGTSLEGPI 245 (764)
Q Consensus 166 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 245 (764)
+|++++ +|. .+++|+.|++++|++++ +|.. +++|++|++++|.+++ +|. .+++|+.|++++|.+++ +
T Consensus 110 ~N~l~~-l~~---~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~-l~~---~~~~L~~L~L~~N~l~~-l 176 (622)
T 3g06_A 110 SNPLTH-LPA---LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLAS-LPA---LPSELCKLWAYNNQLTS-L 176 (622)
T ss_dssp SCCCCC-CCC---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-C
T ss_pred CCcCCC-CCC---CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCCC-cCC---ccCCCCEEECCCCCCCC-C
Confidence 998875 444 56788888888888875 5543 4788888888888875 343 24567777888887775 4
Q ss_pred ccchhcCCCCCEEEcCCCCCCCCCCCCccCCccccccccccccccccCCccccCCCCCCEEeccCCCCCCCccccccCCC
Q 004275 246 PSTISQLKNLTELRISDLKGSSSSFPNLQDMKKMERLILRNCLITGRIPEYIEDMTDLKILDLSFNQLTGPVPGILQNLK 325 (764)
Q Consensus 246 p~~l~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~ 325 (764)
| ..+++|+.|++++|.+.. +|. .+++|+.|++++|.++ .+|.. +++|+.|++++|+|++ +| ..++
T Consensus 177 ~---~~~~~L~~L~Ls~N~l~~--l~~--~~~~L~~L~L~~N~l~-~l~~~---~~~L~~L~Ls~N~L~~-lp---~~l~ 241 (622)
T 3g06_A 177 P---MLPSGLQELSVSDNQLAS--LPT--LPSELYKLWAYNNRLT-SLPAL---PSGLKELIVSGNRLTS-LP---VLPS 241 (622)
T ss_dssp C---CCCTTCCEEECCSSCCSC--CCC--CCTTCCEEECCSSCCS-SCCCC---CTTCCEEECCSSCCSC-CC---CCCT
T ss_pred c---ccCCCCcEEECCCCCCCC--CCC--ccchhhEEECcCCccc-ccCCC---CCCCCEEEccCCccCc-CC---CCCC
Confidence 4 345777778877765543 222 2356667777777766 34432 3567777777777764 44 3446
Q ss_pred CCCEEeccCCcCcCCCChhhhcCCCeEEeecCcCCCC
Q 004275 326 KIDYIFLTNNSLSGTLPDWILTSEKNLDLSYNNFTES 362 (764)
Q Consensus 326 ~L~~L~L~~N~l~g~~p~~~~~~l~~L~Ls~N~l~~~ 362 (764)
+|+.|++++|+|+ .+|. ..+.++.|+|++|+|+..
T Consensus 242 ~L~~L~Ls~N~L~-~lp~-~~~~L~~L~Ls~N~L~~l 276 (622)
T 3g06_A 242 ELKELMVSGNRLT-SLPM-LPSGLLSLSVYRNQLTRL 276 (622)
T ss_dssp TCCEEECCSSCCS-CCCC-CCTTCCEEECCSSCCCSC
T ss_pred cCcEEECCCCCCC-cCCc-ccccCcEEeCCCCCCCcC
Confidence 6677777777766 3444 445566777777777644
No 68
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.90 E-value=2e-22 Score=209.94 Aligned_cols=206 Identities=24% Similarity=0.310 Sum_probs=134.6
Q ss_pred CCCEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEeeCCcCCCCCCccCCCCCCCcEEEcc
Q 004275 110 FLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVLEDNQLVGPLPENLGNLKSLRRILLS 189 (764)
Q Consensus 110 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls 189 (764)
.+++++++++.++ .+|..+. ++|++|+|++|.+++..+..|..+++|++|+|++|.++...+..|.++++|++|+|+
T Consensus 17 ~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~ 93 (270)
T 2o6q_A 17 NKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVT 93 (270)
T ss_dssp TTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECC
T ss_pred CCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECC
Confidence 4567777777776 3554443 466777777777665555566666677777776666664444445666666666666
Q ss_pred CccCCCCCcccccCCCCCcEEEccCccCCCcCcccccCCCCCCEEeeeCCcCCCCCccchhcCCCCCEEEcCCCCCCCCC
Q 004275 190 SNNFTGSIPESYGNLKNLTEFRIDGSNLTGRIPNFIGNWTKLDRLDLQGTSLEGPIPSTISQLKNLTELRISDLKGSSSS 269 (764)
Q Consensus 190 ~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~n~~~~~~ 269 (764)
+|++++..+..|..+++|++|++++|.+++..+..+..+++|++|++++|.+++..+..
T Consensus 94 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~--------------------- 152 (270)
T 2o6q_A 94 DNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGV--------------------- 152 (270)
T ss_dssp SSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTT---------------------
T ss_pred CCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhH---------------------
Confidence 66666544455555666666666666665555555555555555555555555433333
Q ss_pred CCCccCCccccccccccccccccCCccccCCCCCCEEeccCCCCCCCccccccCCCCCCEEeccCCcCcCCCC
Q 004275 270 FPNLQDMKKMERLILRNCLITGRIPEYIEDMTDLKILDLSFNQLTGPVPGILQNLKKIDYIFLTNNSLSGTLP 342 (764)
Q Consensus 270 ~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p 342 (764)
+..+++|++|++++|++++..+..|..+++|++|++++|++++..+..+..+++|+.|++++|++....+
T Consensus 153 ---~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 222 (270)
T 2o6q_A 153 ---FDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCTCN 222 (270)
T ss_dssp ---TTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCSSS
T ss_pred ---ccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCCCc
Confidence 4445556666666677776666678888999999999999987777778888889888888888876543
No 69
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.90 E-value=5.1e-23 Score=215.07 Aligned_cols=224 Identities=20% Similarity=0.221 Sum_probs=157.7
Q ss_pred EEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEeeCCcCCCCCCccCCCCCCCcEEEccCcc
Q 004275 113 EVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVLEDNQLVGPLPENLGNLKSLRRILLSSNN 192 (764)
Q Consensus 113 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~ 192 (764)
..+.++..+. .+|..+. ++|++|++++|.+++..+..|.++++|++|+|++|++++..+..|.++++|++|+|++|+
T Consensus 11 ~~~c~~~~l~-~ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 87 (276)
T 2z62_A 11 TYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNP 87 (276)
T ss_dssp EEECTTSCCS-SCCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred eEEecCCCcc-ccCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCc
Confidence 3455555554 4555443 467888888888876666677778888888888887776666677777778888887777
Q ss_pred CCCCCcccccCCCCCcEEEccCccCCCcCcccccCCCCCCEEeeeCCcCCCC-CccchhcCCCCCEEEcCCCCCCCCCCC
Q 004275 193 FTGSIPESYGNLKNLTEFRIDGSNLTGRIPNFIGNWTKLDRLDLQGTSLEGP-IPSTISQLKNLTELRISDLKGSSSSFP 271 (764)
Q Consensus 193 l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~p~~l~~l~~L~~L~L~~n~~~~~~~~ 271 (764)
+++..+..|.++++|++|++++|++++..+..+..+++|++|++++|.+++. +|..+..+++|+.|+
T Consensus 88 l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~------------ 155 (276)
T 2z62_A 88 IQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLD------------ 155 (276)
T ss_dssp CCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEE------------
T ss_pred cCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEE------------
Confidence 7766666777777777777777777765555666777777777777776652 355555555555554
Q ss_pred CccCCccccccccccccccccCCccccCCCCCC----EEeccCCCCCCCccccccCCCCCCEEeccCCcCcCCCChhh--
Q 004275 272 NLQDMKKMERLILRNCLITGRIPEYIEDMTDLK----ILDLSFNQLTGPVPGILQNLKKIDYIFLTNNSLSGTLPDWI-- 345 (764)
Q Consensus 272 ~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~----~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~-- 345 (764)
+++|++++..+..+..+++|+ .|++++|++++..+..+.. .+|+.|++++|++++..+..+
T Consensus 156 ------------Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~ 222 (276)
T 2z62_A 156 ------------LSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKE-IRLKELALDTNQLKSVPDGIFDR 222 (276)
T ss_dssp ------------CCSSCCCEECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSCS-CCEEEEECCSSCCSCCCTTTTTT
T ss_pred ------------CCCCCCCcCCHHHhhhhhhccccceeeecCCCcccccCccccCC-CcccEEECCCCceeecCHhHhcc
Confidence 555555555555555555555 8999999999665555544 589999999999996655544
Q ss_pred hcCCCeEEeecCcCCCCCC
Q 004275 346 LTSEKNLDLSYNNFTESSP 364 (764)
Q Consensus 346 ~~~l~~L~Ls~N~l~~~~p 364 (764)
.+.++.|++++|++++..|
T Consensus 223 l~~L~~L~l~~N~~~c~c~ 241 (276)
T 2z62_A 223 LTSLQKIWLHTNPWDCSCP 241 (276)
T ss_dssp CCSCCEEECCSSCBCCCTT
T ss_pred cccccEEEccCCcccccCC
Confidence 4667899999999998755
No 70
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.90 E-value=8.8e-23 Score=212.87 Aligned_cols=206 Identities=19% Similarity=0.233 Sum_probs=165.0
Q ss_pred eeEEEEEcCCCcccccCCccCCCCCCCCEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEe
Q 004275 85 CHVTVILLKGFNLAGVIPEEFGNLTFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVL 164 (764)
Q Consensus 85 ~~v~~L~L~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 164 (764)
.+++.|+++++.+.. + +.+..+++|++|+|++|.+++ + +.+..+++|++|+|++|.+++..+..|+.+++|++|+|
T Consensus 41 ~~L~~L~l~~~~i~~-~-~~l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 116 (272)
T 3rfs_A 41 NSIDQIIANNSDIKS-V-QGIQYLPNVRYLALGGNKLHD-I-SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVL 116 (272)
T ss_dssp TTCCEEECTTSCCCC-C-TTGGGCTTCCEEECTTSCCCC-C-GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred cceeeeeeCCCCccc-c-cccccCCCCcEEECCCCCCCC-c-hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEEC
Confidence 357888888887664 2 357788889999999888875 3 46888888999999998888777777888888999999
Q ss_pred eCCcCCCCCCccCCCCCCCcEEEccCccCCCCCcccccCCCCCcEEEccCccCCCcCcccccCCCCCCEEeeeCCcCCCC
Q 004275 165 EDNQLVGPLPENLGNLKSLRRILLSSNNFTGSIPESYGNLKNLTEFRIDGSNLTGRIPNFIGNWTKLDRLDLQGTSLEGP 244 (764)
Q Consensus 165 s~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 244 (764)
++|++++..+..+.++++|++|++++|++++..+..+..+++|++|++++|++++..+..+..+++|+.|++++|++++.
T Consensus 117 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 196 (272)
T 3rfs_A 117 VENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSV 196 (272)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCcc
Confidence 98888877777788888899999998888877777788888888888888888877777778888888888888888887
Q ss_pred CccchhcCCCCCEEEcCCCCCCCCCCCCccCCccccccccccccccccCCccccCCC
Q 004275 245 IPSTISQLKNLTELRISDLKGSSSSFPNLQDMKKMERLILRNCLITGRIPEYIEDMT 301 (764)
Q Consensus 245 ~p~~l~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 301 (764)
.|..+..+++|+.|++++|... +.+++|+.|+++.|.++|.+|.+++.+.
T Consensus 197 ~~~~~~~l~~L~~L~l~~N~~~-------~~~~~l~~l~~~~n~~~g~ip~~~~~~~ 246 (272)
T 3rfs_A 197 PDGVFDRLTSLQYIWLHDNPWD-------CTCPGIRYLSEWINKHSGVVRNSAGSVA 246 (272)
T ss_dssp CTTTTTTCTTCCEEECCSSCBC-------CCTTTTHHHHHHHHHTGGGBBCTTSCBC
T ss_pred CHHHHhCCcCCCEEEccCCCcc-------ccCcHHHHHHHHHHhCCCcccCcccccC
Confidence 7777888888888888886432 3356777788888888887777766543
No 71
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.89 E-value=6.6e-23 Score=213.84 Aligned_cols=207 Identities=19% Similarity=0.239 Sum_probs=132.6
Q ss_pred CCCCCCCCEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEeeCCcCCCCCCccCCCCCCCc
Q 004275 105 FGNLTFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVLEDNQLVGPLPENLGNLKSLR 184 (764)
Q Consensus 105 l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~ 184 (764)
+..+++|+.|++++|.++. + ..+..+++|++|++++|.+++ + ..++.+++|++|+|++|.+++..+..+.++++|+
T Consensus 37 ~~~l~~L~~L~l~~~~i~~-~-~~l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 112 (272)
T 3rfs_A 37 QNELNSIDQIIANNSDIKS-V-QGIQYLPNVRYLALGGNKLHD-I-SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLK 112 (272)
T ss_dssp HHHHTTCCEEECTTSCCCC-C-TTGGGCTTCCEEECTTSCCCC-C-GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCC
T ss_pred cccccceeeeeeCCCCccc-c-cccccCCCCcEEECCCCCCCC-c-hhhcCCCCCCEEECCCCccCccChhHhcCCcCCC
Confidence 3455666666666666652 2 236666666666666666654 2 3556666666666666666655555556666666
Q ss_pred EEEccCccCCCCCcccccCCCCCcEEEccCccCCCcCcccccCCCCCCEEeeeCCcCCCCCccchhcCCCCCEEEcCCCC
Q 004275 185 RILLSSNNFTGSIPESYGNLKNLTEFRIDGSNLTGRIPNFIGNWTKLDRLDLQGTSLEGPIPSTISQLKNLTELRISDLK 264 (764)
Q Consensus 185 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~n~ 264 (764)
+|++++|++++..+..+..+++|++|++++|++++..+..+..+++|+.|++++|++++..+..
T Consensus 113 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~---------------- 176 (272)
T 3rfs_A 113 ELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGV---------------- 176 (272)
T ss_dssp EEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTT----------------
T ss_pred EEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHH----------------
Confidence 6666666666555555555666666666666555544444555555555555555555443333
Q ss_pred CCCCCCCCccCCccccccccccccccccCCccccCCCCCCEEeccCCCCCCCccccccCCCCCCEEeccCCcCcCCCChh
Q 004275 265 GSSSSFPNLQDMKKMERLILRNCLITGRIPEYIEDMTDLKILDLSFNQLTGPVPGILQNLKKIDYIFLTNNSLSGTLPDW 344 (764)
Q Consensus 265 ~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~ 344 (764)
+..+++|++|++++|++++..|..+..+++|++|++++|.+.+. +++|+++++..|.++|.+|.+
T Consensus 177 --------~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~~ 241 (272)
T 3rfs_A 177 --------FDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNS 241 (272)
T ss_dssp --------TTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBCT
T ss_pred --------hcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccCc
Confidence 44555666666667777777777778888999999999988754 456888889999999999887
Q ss_pred hh
Q 004275 345 IL 346 (764)
Q Consensus 345 ~~ 346 (764)
+.
T Consensus 242 ~~ 243 (272)
T 3rfs_A 242 AG 243 (272)
T ss_dssp TS
T ss_pred cc
Confidence 63
No 72
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.89 E-value=1e-25 Score=253.40 Aligned_cols=276 Identities=19% Similarity=0.212 Sum_probs=140.9
Q ss_pred eEEEEEcCCCcccc----cCCccCCCCCCCCEEEccCCcCCccCchhhhc-----CCCCcEEecccCcCccc----CCcC
Q 004275 86 HVTVILLKGFNLAG----VIPEEFGNLTFLQEVDLSRNYFNGSLPKSFAR-----LQNLTKLLILGNRLSGS----IPLE 152 (764)
Q Consensus 86 ~v~~L~L~~~~l~g----~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~-----l~~L~~L~Ls~n~l~~~----~p~~ 152 (764)
+++.|+|++|.+.. .++..+..+++|++|+|++|.++...+..+.. .++|++|+|++|.+++. ++..
T Consensus 86 ~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~ 165 (461)
T 1z7x_W 86 KIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASV 165 (461)
T ss_dssp CCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHH
T ss_pred ceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHH
Confidence 35566666665552 34555556666666666666655433333322 34566666666655542 2334
Q ss_pred cCCCCCCCEEEeeCCcCCCCCCccCC-----CCCCCcEEEccCccCCCC----CcccccCCCCCcEEEccCccCCCcC--
Q 004275 153 IGDISTLEELVLEDNQLVGPLPENLG-----NLKSLRRILLSSNNFTGS----IPESYGNLKNLTEFRIDGSNLTGRI-- 221 (764)
Q Consensus 153 ~~~l~~L~~L~Ls~N~l~~~~p~~l~-----~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~n~l~~~~-- 221 (764)
+..+++|++|+|++|.+....+..+. .+++|++|++++|.+++. ++..+..+++|++|++++|.++...
T Consensus 166 l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~ 245 (461)
T 1z7x_W 166 LRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMA 245 (461)
T ss_dssp HHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHH
T ss_pred HhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHH
Confidence 44555666666666655433222222 244566666666665542 3445555566666666666554321
Q ss_pred ---cccccCCCCCCEEeeeCCcCCCC----CccchhcCCCCCEEEcCCCCCCCCCCCCc-----cCCccccccccccccc
Q 004275 222 ---PNFIGNWTKLDRLDLQGTSLEGP----IPSTISQLKNLTELRISDLKGSSSSFPNL-----QDMKKMERLILRNCLI 289 (764)
Q Consensus 222 ---p~~~~~l~~L~~L~L~~N~l~~~----~p~~l~~l~~L~~L~L~~n~~~~~~~~~l-----~~l~~L~~L~Ls~N~l 289 (764)
+..+..+++|++|++++|.++.. ++..+..+++|++|++++|.+.......+ ...++|++|++++|.+
T Consensus 246 ~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l 325 (461)
T 1z7x_W 246 ELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSF 325 (461)
T ss_dssp HHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCC
T ss_pred HHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCC
Confidence 12222455666666666665532 34445556666666666543321111111 1124566666666666
Q ss_pred ccc----CCccccCCCCCCEEeccCCCCCCCccccccC-----CCCCCEEeccCCcCcC----CCChhh--hcCCCeEEe
Q 004275 290 TGR----IPEYIEDMTDLKILDLSFNQLTGPVPGILQN-----LKKIDYIFLTNNSLSG----TLPDWI--LTSEKNLDL 354 (764)
Q Consensus 290 ~~~----~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~-----l~~L~~L~L~~N~l~g----~~p~~~--~~~l~~L~L 354 (764)
++. ++..+..+++|++|++++|++++..+..+.. .++|++|++++|.+++ .+|..+ .+.++.||+
T Consensus 326 ~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l 405 (461)
T 1z7x_W 326 TAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDL 405 (461)
T ss_dssp BGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEEC
T ss_pred chHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEEC
Confidence 543 3344445566666666666665433332221 4566666666666654 444443 344556666
Q ss_pred ecCcCCC
Q 004275 355 SYNNFTE 361 (764)
Q Consensus 355 s~N~l~~ 361 (764)
++|++++
T Consensus 406 ~~N~i~~ 412 (461)
T 1z7x_W 406 SNNCLGD 412 (461)
T ss_dssp CSSSCCH
T ss_pred CCCCCCH
Confidence 6665553
No 73
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.88 E-value=4.8e-22 Score=209.23 Aligned_cols=204 Identities=23% Similarity=0.243 Sum_probs=125.6
Q ss_pred CCCCCCCCEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEeeCCcCCCCCCccCCCCCCCc
Q 004275 105 FGNLTFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVLEDNQLVGPLPENLGNLKSLR 184 (764)
Q Consensus 105 l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~ 184 (764)
+.++++|+++++++|.++ .+|..+. ++|+.|+|++|.+++..|..|..+++|++|+|++|.+++..+ ...+++|+
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~ 80 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQV--DGTLPVLG 80 (290)
T ss_dssp EECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEEC--CSCCTTCC
T ss_pred ccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccC--CCCCCcCC
Confidence 556777777777777776 4554443 567777777777776666667777777777777777664322 25666666
Q ss_pred EEEccCccCCCCCcccccCCCCCcEEEccCccCCCcCcccccCCCCCCEEeeeCCcCCCCCccchhcCCCCCEEEcCCCC
Q 004275 185 RILLSSNNFTGSIPESYGNLKNLTEFRIDGSNLTGRIPNFIGNWTKLDRLDLQGTSLEGPIPSTISQLKNLTELRISDLK 264 (764)
Q Consensus 185 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~n~ 264 (764)
+|+|++|+++ .+|..+..+++|++|++++|++++..|..|..+++|++|+|++|++++..+..|.
T Consensus 81 ~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~-------------- 145 (290)
T 1p9a_G 81 TLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLT-------------- 145 (290)
T ss_dssp EEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTT--------------
T ss_pred EEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcc--------------
Confidence 6666666665 4555555555666666666655554445555555555555555555543333333
Q ss_pred CCCCCCCCccCCccccccccccccccccCCccccCCCCCCEEeccCCCCCCCccccccCCCCCCEEeccCCcCcC
Q 004275 265 GSSSSFPNLQDMKKMERLILRNCLITGRIPEYIEDMTDLKILDLSFNQLTGPVPGILQNLKKIDYIFLTNNSLSG 339 (764)
Q Consensus 265 ~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g 339 (764)
.+++|+.|+|++|++++..+..+..+++|+.|++++|+++ .+|..+..+.+|+.+++++|++..
T Consensus 146 ----------~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C 209 (290)
T 1p9a_G 146 ----------PTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLC 209 (290)
T ss_dssp ----------TCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCC
T ss_pred ----------cccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccC
Confidence 3444555555555666444445566777777777777777 566666666677777777776654
No 74
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.88 E-value=4.4e-22 Score=209.52 Aligned_cols=199 Identities=22% Similarity=0.197 Sum_probs=169.6
Q ss_pred eeEEEEEcCCCcccccCCccCCCCCCCCEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEe
Q 004275 85 CHVTVILLKGFNLAGVIPEEFGNLTFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVL 164 (764)
Q Consensus 85 ~~v~~L~L~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 164 (764)
.+++.+++++++++. +|..+. +.|++|+|++|.+++..|..|..+++|++|+|++|.+++..+. +.+++|++|+|
T Consensus 10 ~~l~~l~~~~~~l~~-ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L~~L~L 84 (290)
T 1p9a_G 10 ASHLEVNCDKRNLTA-LPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVLGTLDL 84 (290)
T ss_dssp TTCCEEECTTSCCSS-CCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTCCEEEC
T ss_pred CCccEEECCCCCCCc-CCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcCCEEEC
Confidence 468899999999874 666554 6899999999999988889999999999999999999865443 78999999999
Q ss_pred eCCcCCCCCCccCCCCCCCcEEEccCccCCCCCcccccCCCCCcEEEccCccCCCcCcccccCCCCCCEEeeeCCcCCCC
Q 004275 165 EDNQLVGPLPENLGNLKSLRRILLSSNNFTGSIPESYGNLKNLTEFRIDGSNLTGRIPNFIGNWTKLDRLDLQGTSLEGP 244 (764)
Q Consensus 165 s~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 244 (764)
++|+++ .+|..+..+++|++|+|++|++++..+..|..+++|++|++++|++++..+..|..+++|+.|+|++|++++.
T Consensus 85 s~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l 163 (290)
T 1p9a_G 85 SHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTEL 163 (290)
T ss_dssp CSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCC
T ss_pred CCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCCcc
Confidence 999998 7888899999999999999999988788999999999999999999988788889999999999999999966
Q ss_pred CccchhcCCCCCEEEcCCCCCCCCCCCCccCCccccccccccccccccCCccccCCCCCCEEeccCCCCC
Q 004275 245 IPSTISQLKNLTELRISDLKGSSSSFPNLQDMKKMERLILRNCLITGRIPEYIEDMTDLKILDLSFNQLT 314 (764)
Q Consensus 245 ~p~~l~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 314 (764)
.+..+..+++|+.|++++ |+++ .+|..+..+++|+.|++++|.+.
T Consensus 164 ~~~~~~~l~~L~~L~L~~------------------------N~l~-~ip~~~~~~~~L~~l~L~~Np~~ 208 (290)
T 1p9a_G 164 PAGLLNGLENLDTLLLQE------------------------NSLY-TIPKGFFGSHLLPFAFLHGNPWL 208 (290)
T ss_dssp CTTTTTTCTTCCEEECCS------------------------SCCC-CCCTTTTTTCCCSEEECCSCCBC
T ss_pred CHHHhcCcCCCCEEECCC------------------------CcCC-ccChhhcccccCCeEEeCCCCcc
Confidence 555556666666665555 4554 45666667778888898888876
No 75
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.88 E-value=8.8e-24 Score=227.31 Aligned_cols=261 Identities=16% Similarity=0.217 Sum_probs=158.9
Q ss_pred CCceeccCCCCCCceeeEEEEEcCCCcccccCCccCCCC--CCCCEEEccCCcCCccCchhhhcCCCCcEEecccCcCcc
Q 004275 70 GSNFTCDCTYSNNTVCHVTVILLKGFNLAGVIPEEFGNL--TFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSG 147 (764)
Q Consensus 70 ~~gv~C~~~~~~~~~~~v~~L~L~~~~l~g~~p~~l~~L--~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~ 147 (764)
|.++.|+. ..++.++++++.+. +..+..+ ++++.|++++|.+.+..+. +..+++|++|+|++|.+++
T Consensus 39 W~~~~~~~-------~~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~ 107 (336)
T 2ast_B 39 WYRLASDE-------SLWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEV 107 (336)
T ss_dssp HHHHHTCS-------TTSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECH
T ss_pred HHHHhcCc-------hhheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCH
Confidence 66666642 12456677766654 3344455 6677777777777655444 4456677777777776664
Q ss_pred c-CCcCcCCCCCCCEEEeeCCcCCCCCCccCCCCCCCcEEEccCc-cCCC-CCcccccCCCCCcEEEccCc-cCCCc-Cc
Q 004275 148 S-IPLEIGDISTLEELVLEDNQLVGPLPENLGNLKSLRRILLSSN-NFTG-SIPESYGNLKNLTEFRIDGS-NLTGR-IP 222 (764)
Q Consensus 148 ~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N-~l~~-~~p~~~~~l~~L~~L~L~~n-~l~~~-~p 222 (764)
. +|..+..+++|++|+|++|.+++..|..+..+++|++|++++| .+++ .++..+..+++|++|++++| .+++. ++
T Consensus 108 ~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~ 187 (336)
T 2ast_B 108 STLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQ 187 (336)
T ss_dssp HHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHH
T ss_pred HHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHH
Confidence 4 5666666667777777666666556666666666666666666 4543 24445556666666666666 55543 34
Q ss_pred ccccCCC-CCCEEeeeCC--cCC-CCCccchhcCCCCCEEEcCCCCCCCCCCCCccCCcccccccccccc-ccccCCccc
Q 004275 223 NFIGNWT-KLDRLDLQGT--SLE-GPIPSTISQLKNLTELRISDLKGSSSSFPNLQDMKKMERLILRNCL-ITGRIPEYI 297 (764)
Q Consensus 223 ~~~~~l~-~L~~L~L~~N--~l~-~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~N~-l~~~~p~~~ 297 (764)
..+..++ +|++|++++| .++ +.+|..+..+++ |++|++++|. +++..+..+
T Consensus 188 ~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~------------------------L~~L~l~~~~~l~~~~~~~l 243 (336)
T 2ast_B 188 VAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPN------------------------LVHLDLSDSVMLKNDCFQEF 243 (336)
T ss_dssp HHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTT------------------------CSEEECTTCTTCCGGGGGGG
T ss_pred HHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCC------------------------CCEEeCCCCCcCCHHHHHHH
Confidence 5555556 6666666666 233 233444444444 5555555555 454555567
Q ss_pred cCCCCCCEEeccCCC-CCCCccccccCCCCCCEEeccCCcCcCCCChhhhcCCCeEEeecCcCCCCCCcc
Q 004275 298 EDMTDLKILDLSFNQ-LTGPVPGILQNLKKIDYIFLTNNSLSGTLPDWILTSEKNLDLSYNNFTESSPAT 366 (764)
Q Consensus 298 ~~l~~L~~L~Ls~N~-l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~l~~L~Ls~N~l~~~~p~~ 366 (764)
..+++|++|++++|. ++......+..+++|+.|++++| ++...-..+...++.|++++|++++..|..
T Consensus 244 ~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~-i~~~~~~~l~~~l~~L~l~~n~l~~~~~~~ 312 (336)
T 2ast_B 244 FQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI-VPDGTLQLLKEALPHLQINCSHFTTIARPT 312 (336)
T ss_dssp GGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS-SCTTCHHHHHHHSTTSEESCCCSCCTTCSS
T ss_pred hCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc-cCHHHHHHHHhhCcceEEecccCccccCCc
Confidence 777888888888885 22222225777888888888888 433222223345778889999999887654
No 76
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.87 E-value=3.2e-22 Score=212.78 Aligned_cols=224 Identities=16% Similarity=0.173 Sum_probs=161.9
Q ss_pred CCCCEEEccCCcCCccCch---hhhcCCCCcEEecccCcCcccCCcCc--CCCCCCCEEEeeCCcCCCCCC----ccCCC
Q 004275 109 TFLQEVDLSRNYFNGSLPK---SFARLQNLTKLLILGNRLSGSIPLEI--GDISTLEELVLEDNQLVGPLP----ENLGN 179 (764)
Q Consensus 109 ~~L~~L~Ls~N~l~~~~p~---~~~~l~~L~~L~Ls~n~l~~~~p~~~--~~l~~L~~L~Ls~N~l~~~~p----~~l~~ 179 (764)
..++.|++.++.+....-. .+..+++|++|++++|.+++..|..+ ..+++|++|+|++|.+++..+ ..+..
T Consensus 64 ~~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~ 143 (310)
T 4glp_A 64 LRVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWL 143 (310)
T ss_dssp CCCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTB
T ss_pred cceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhh
Confidence 3578888888877532111 12345779999999999998888888 889999999999999987655 34567
Q ss_pred CCCCcEEEccCccCCCCCcccccCCCCCcEEEccCccCCCc--C--cccccCCCCCCEEeeeCCcCCCCCcc----chhc
Q 004275 180 LKSLRRILLSSNNFTGSIPESYGNLKNLTEFRIDGSNLTGR--I--PNFIGNWTKLDRLDLQGTSLEGPIPS----TISQ 251 (764)
Q Consensus 180 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~--~--p~~~~~l~~L~~L~L~~N~l~~~~p~----~l~~ 251 (764)
+++|++|+|++|++++..+..+..+++|++|++++|++.+. + +..++.+++|++|+|++|+++. ++. .+..
T Consensus 144 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~~ 222 (310)
T 4glp_A 144 KPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET-PTGVCAALAAA 222 (310)
T ss_dssp CSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC-HHHHHHHHHHH
T ss_pred ccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc-hHHHHHHHHhc
Confidence 88999999999999888888889999999999999987652 2 2334678889999999998863 232 2467
Q ss_pred CCCCCEEEcCCCCCCCCCCCCccCC---ccccccccccccccccCCccccCCCCCCEEeccCCCCCCCccccccCCCCCC
Q 004275 252 LKNLTELRISDLKGSSSSFPNLQDM---KKMERLILRNCLITGRIPEYIEDMTDLKILDLSFNQLTGPVPGILQNLKKID 328 (764)
Q Consensus 252 l~~L~~L~L~~n~~~~~~~~~l~~l---~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~ 328 (764)
+++|++|++++|.+.....+.+..+ ++|++|++++|+++ .+|..+. ++|++|++++|++++. |. +..+++|+
T Consensus 223 l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~ 297 (310)
T 4glp_A 223 GVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVD 297 (310)
T ss_dssp TCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCS
T ss_pred CCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCcc
Confidence 7788888888766544433333333 57777777777777 5565553 6777777777777753 32 45667777
Q ss_pred EEeccCCcCc
Q 004275 329 YIFLTNNSLS 338 (764)
Q Consensus 329 ~L~L~~N~l~ 338 (764)
.|++++|+|+
T Consensus 298 ~L~L~~N~l~ 307 (310)
T 4glp_A 298 NLTLDGNPFL 307 (310)
T ss_dssp CEECSSTTTS
T ss_pred EEECcCCCCC
Confidence 7777777665
No 77
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.87 E-value=8.2e-24 Score=230.22 Aligned_cols=253 Identities=18% Similarity=0.213 Sum_probs=157.2
Q ss_pred EEcCCCcccccCCccCCCCCCCCEEEccCCcCCccCc----hhhhcCC-CCcEEecccCcCcccCCcCcCCC-----CCC
Q 004275 90 ILLKGFNLAGVIPEEFGNLTFLQEVDLSRNYFNGSLP----KSFARLQ-NLTKLLILGNRLSGSIPLEIGDI-----STL 159 (764)
Q Consensus 90 L~L~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~p----~~~~~l~-~L~~L~Ls~n~l~~~~p~~~~~l-----~~L 159 (764)
..++.++++|.+|..+...++|++|||++|.+++..+ ..|..++ +|++|+|++|.+++..+..+..+ ++|
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L 82 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANV 82 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTC
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCc
Confidence 4677788888777776777778888888888877666 6677787 78888888888887666666654 788
Q ss_pred CEEEeeCCcCCCCCCccCC----CC-CCCcEEEccCccCCCCCccccc----C-CCCCcEEEccCccCCCcC----cccc
Q 004275 160 EELVLEDNQLVGPLPENLG----NL-KSLRRILLSSNNFTGSIPESYG----N-LKNLTEFRIDGSNLTGRI----PNFI 225 (764)
Q Consensus 160 ~~L~Ls~N~l~~~~p~~l~----~l-~~L~~L~Ls~N~l~~~~p~~~~----~-l~~L~~L~L~~n~l~~~~----p~~~ 225 (764)
++|+|++|.+++..+..+. .+ ++|++|+|++|++++..+..+. . .++|++|++++|.+++.. +..+
T Consensus 83 ~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l 162 (362)
T 3goz_A 83 TSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQIL 162 (362)
T ss_dssp CEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHH
T ss_pred cEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHH
Confidence 8888888888766655433 33 7888888888888766554443 3 257888888888777433 3334
Q ss_pred cCCC-CCCEEeeeCCcCCCCCccchhc----C-CCCCEEEcCCCCCCCCCCCCccCCccccccccccccccccCCccccC
Q 004275 226 GNWT-KLDRLDLQGTSLEGPIPSTISQ----L-KNLTELRISDLKGSSSSFPNLQDMKKMERLILRNCLITGRIPEYIED 299 (764)
Q Consensus 226 ~~l~-~L~~L~L~~N~l~~~~p~~l~~----l-~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~ 299 (764)
..++ +|++|+|++|++++..+..+.. + ++|++|++++|.+...... .++..+..
T Consensus 163 ~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~--------------------~l~~~l~~ 222 (362)
T 3goz_A 163 AAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYA--------------------ELAYIFSS 222 (362)
T ss_dssp HTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHH--------------------HHHHHHHH
T ss_pred hcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHH--------------------HHHHHHhc
Confidence 4554 7888888888777665544432 2 3566655555433221110 12223333
Q ss_pred -CCCCCEEeccCCCCCCCcc----ccccCCCCCCEEeccCCcCcCCCChhh---------hcCCCeEEeecCcCCCC
Q 004275 300 -MTDLKILDLSFNQLTGPVP----GILQNLKKIDYIFLTNNSLSGTLPDWI---------LTSEKNLDLSYNNFTES 362 (764)
Q Consensus 300 -l~~L~~L~Ls~N~l~g~~p----~~~~~l~~L~~L~L~~N~l~g~~p~~~---------~~~l~~L~Ls~N~l~~~ 362 (764)
.++|++|+|++|++++..+ ..+..+++|+.|++++|.+.+..+..+ .+.++.||+++|++.+.
T Consensus 223 ~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~ 299 (362)
T 3goz_A 223 IPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPS 299 (362)
T ss_dssp SCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGG
T ss_pred CCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCc
Confidence 2356666666666654433 233455666666666666443322211 12234566666666554
No 78
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.87 E-value=2.2e-21 Score=199.71 Aligned_cols=210 Identities=23% Similarity=0.318 Sum_probs=146.8
Q ss_pred CCCcEEecccCcCcccCCcCcCCCCCCCEEEeeCCcCCCCCCccCCCCCCCcEEEccCccCCCCCcccccCCCCCcEEEc
Q 004275 133 QNLTKLLILGNRLSGSIPLEIGDISTLEELVLEDNQLVGPLPENLGNLKSLRRILLSSNNFTGSIPESYGNLKNLTEFRI 212 (764)
Q Consensus 133 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 212 (764)
...++++++++.++ .+|..+. ++|+.|+|++|.+.+..+..|.++++|++|+|++|++++..+..|..+++|++|++
T Consensus 14 ~~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 90 (251)
T 3m19_A 14 EGKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGL 90 (251)
T ss_dssp GGGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEEC
Confidence 45678888888887 6676654 57888888888888777777888888888888888887777777777777777777
Q ss_pred cCccCCCcCcccccCCCCCCEEeeeCCcCCCCCccchhcCCCCCEEEcCCCCCCCCCCCCccCCcccccccccccccccc
Q 004275 213 DGSNLTGRIPNFIGNWTKLDRLDLQGTSLEGPIPSTISQLKNLTELRISDLKGSSSSFPNLQDMKKMERLILRNCLITGR 292 (764)
Q Consensus 213 ~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~ 292 (764)
++|++++..+..+..+++|++|+|++|++++..+..+.. +++|++|+|++|++++.
T Consensus 91 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~------------------------l~~L~~L~Ls~N~l~~~ 146 (251)
T 3m19_A 91 ANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDR------------------------LTKLKELRLNTNQLQSI 146 (251)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTT------------------------CTTCCEEECCSSCCCCC
T ss_pred CCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhcc------------------------CCcccEEECcCCcCCcc
Confidence 777777666666777777777777777776554444444 44555556666667766
Q ss_pred CCccccCCCCCCEEeccCCCCCCCccccccCCCCCCEEeccCCcCcCCC------ChhhhcC-CCeEEeecCcCCCCCCc
Q 004275 293 IPEYIEDMTDLKILDLSFNQLTGPVPGILQNLKKIDYIFLTNNSLSGTL------PDWILTS-EKNLDLSYNNFTESSPA 365 (764)
Q Consensus 293 ~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~------p~~~~~~-l~~L~Ls~N~l~~~~p~ 365 (764)
.+..+..+++|++|+|++|++++..+..+..+++|+.|++++|++++.. +.|+... .+..+.+++.+.+.++.
T Consensus 147 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (251)
T 3m19_A 147 PAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCSRCEILYLSQWIRENSNKVKDGTGQNLHESPDG 226 (251)
T ss_dssp CTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTTSTTHHHHHHHHHHSGGGBCC-------CCGGG
T ss_pred CHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCCccccHHHHHHHHhcccceeeccCcccccCCCc
Confidence 6667888889999999999998877778888999999999999998773 3344222 23456667777666544
Q ss_pred c-ccc
Q 004275 366 T-CRE 369 (764)
Q Consensus 366 ~-~~~ 369 (764)
. |..
T Consensus 227 ~~C~~ 231 (251)
T 3m19_A 227 VTCSD 231 (251)
T ss_dssp CBBTT
T ss_pred CccCC
Confidence 3 543
No 79
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.87 E-value=6.7e-24 Score=233.04 Aligned_cols=244 Identities=17% Similarity=0.165 Sum_probs=136.1
Q ss_pred CCccCCCCCCCCEEEccCCcCCccCch----hhhcCCCCcEEecccC---cCcccCCcCc-------CCCCCCCEEEeeC
Q 004275 101 IPEEFGNLTFLQEVDLSRNYFNGSLPK----SFARLQNLTKLLILGN---RLSGSIPLEI-------GDISTLEELVLED 166 (764)
Q Consensus 101 ~p~~l~~L~~L~~L~Ls~N~l~~~~p~----~~~~l~~L~~L~Ls~n---~l~~~~p~~~-------~~l~~L~~L~Ls~ 166 (764)
++..+..+++|++|+|++|.++...+. .+..+++|++|+|++| ++++.+|..+ ..+++|++|+|++
T Consensus 24 l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~ 103 (386)
T 2ca6_A 24 VFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSD 103 (386)
T ss_dssp TSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCS
T ss_pred HHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCC
Confidence 344445555566666666655544222 2445555555555553 2333334333 3444555555555
Q ss_pred CcCCCCCCccCCCCCCCcEEEccCccCCCCCcccccCCCCCcEEEccCccCCCcCcccc----cCC---------CCCCE
Q 004275 167 NQLVGPLPENLGNLKSLRRILLSSNNFTGSIPESYGNLKNLTEFRIDGSNLTGRIPNFI----GNW---------TKLDR 233 (764)
Q Consensus 167 N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~----~~l---------~~L~~ 233 (764)
|.+.+.-.. .+|..+..+++|++|+|++|.++...+..+ ..+ ++|++
T Consensus 104 n~l~~~~~~--------------------~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~ 163 (386)
T 2ca6_A 104 NAFGPTAQE--------------------PLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRS 163 (386)
T ss_dssp CCCCTTTHH--------------------HHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCE
T ss_pred CcCCHHHHH--------------------HHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcE
Confidence 544431000 233444444455555555554432222222 222 55566
Q ss_pred EeeeCCcCC-CCCc---cchhcCCCCCEEEcCCCCCCCC----CCC-CccCCcccccccccccccc----ccCCccccCC
Q 004275 234 LDLQGTSLE-GPIP---STISQLKNLTELRISDLKGSSS----SFP-NLQDMKKMERLILRNCLIT----GRIPEYIEDM 300 (764)
Q Consensus 234 L~L~~N~l~-~~~p---~~l~~l~~L~~L~L~~n~~~~~----~~~-~l~~l~~L~~L~Ls~N~l~----~~~p~~~~~l 300 (764)
|++++|+++ +.+| ..+..+++|+.|++++|.+... ..+ .+..+++|++|+|++|.++ +.+|..+..+
T Consensus 164 L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~ 243 (386)
T 2ca6_A 164 IICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSW 243 (386)
T ss_dssp EECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGC
T ss_pred EECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccC
Confidence 666666554 2233 2445556666666665443311 122 4556667777777777775 4567777778
Q ss_pred CCCCEEeccCCCCCCC----cccccc--CCCCCCEEeccCCcCcC----CCChhh---hcCCCeEEeecCcCCCCCC
Q 004275 301 TDLKILDLSFNQLTGP----VPGILQ--NLKKIDYIFLTNNSLSG----TLPDWI---LTSEKNLDLSYNNFTESSP 364 (764)
Q Consensus 301 ~~L~~L~Ls~N~l~g~----~p~~~~--~l~~L~~L~L~~N~l~g----~~p~~~---~~~l~~L~Ls~N~l~~~~p 364 (764)
++|++|+|++|++++. +|..+. .+++|+.|+|++|.+++ .+|..+ .+.++.|++++|++++..+
T Consensus 244 ~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 244 PNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp TTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSH
T ss_pred CCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchh
Confidence 8888888888888764 455553 37888888888888887 467665 3667788888888887664
No 80
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.87 E-value=3.9e-21 Score=222.10 Aligned_cols=242 Identities=26% Similarity=0.331 Sum_probs=201.3
Q ss_pred eeEEEEEcCCCcccccCCccCCCCCCCCEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEe
Q 004275 85 CHVTVILLKGFNLAGVIPEEFGNLTFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVL 164 (764)
Q Consensus 85 ~~v~~L~L~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 164 (764)
.+++.|+|++|++.. +|. .+++|++|+|++|.++. +|. .+++|++|+|++|.+++ +|. .+++|+.|++
T Consensus 61 ~~L~~L~L~~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L 128 (622)
T 3g06_A 61 AHITTLVIPDNNLTS-LPA---LPPELRTLEVSGNQLTS-LPV---LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWI 128 (622)
T ss_dssp TTCSEEEECSCCCSC-CCC---CCTTCCEEEECSCCCSC-CCC---CCTTCCEEEECSCCCCC-CCC---CCTTCCEEEC
T ss_pred CCCcEEEecCCCCCC-CCC---cCCCCCEEEcCCCcCCc-CCC---CCCCCCEEECcCCcCCC-CCC---CCCCcCEEEC
Confidence 469999999999884 565 57899999999999984 665 78999999999999985 555 5789999999
Q ss_pred eCCcCCCCCCccCCCCCCCcEEEccCccCCCCCcccccCCCCCcEEEccCccCCCcCcccccCCCCCCEEeeeCCcCCCC
Q 004275 165 EDNQLVGPLPENLGNLKSLRRILLSSNNFTGSIPESYGNLKNLTEFRIDGSNLTGRIPNFIGNWTKLDRLDLQGTSLEGP 244 (764)
Q Consensus 165 s~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 244 (764)
++|++++ +|.. +++|++|+|++|++++ +|. .+++|+.|++++|.+++ +| ..+++|+.|++++|.+++
T Consensus 129 ~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~-l~~---~~~~L~~L~L~~N~l~~-l~---~~~~~L~~L~Ls~N~l~~- 195 (622)
T 3g06_A 129 FGNQLTS-LPVL---PPGLQELSVSDNQLAS-LPA---LPSELCKLWAYNNQLTS-LP---MLPSGLQELSVSDNQLAS- 195 (622)
T ss_dssp CSSCCSC-CCCC---CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-
T ss_pred CCCCCCc-CCCC---CCCCCEEECcCCcCCC-cCC---ccCCCCEEECCCCCCCC-Cc---ccCCCCcEEECCCCCCCC-
Confidence 9999985 6654 4899999999999985 454 35789999999999995 55 557899999999999996
Q ss_pred CccchhcCCCCCEEEcCCCCCCCCCCCCccCCccccccccccccccccCCccccCCCCCCEEeccCCCCCCCccccccCC
Q 004275 245 IPSTISQLKNLTELRISDLKGSSSSFPNLQDMKKMERLILRNCLITGRIPEYIEDMTDLKILDLSFNQLTGPVPGILQNL 324 (764)
Q Consensus 245 ~p~~l~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l 324 (764)
+|.. +++|+.|++++|.+.. +|. .+++|+.|++++|.+++ +| ..+++|+.|++++|+|+ .+|. .+
T Consensus 196 l~~~---~~~L~~L~L~~N~l~~--l~~--~~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~-~lp~---~~ 260 (622)
T 3g06_A 196 LPTL---PSELYKLWAYNNRLTS--LPA--LPSGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLT-SLPM---LP 260 (622)
T ss_dssp CCCC---CTTCCEEECCSSCCSS--CCC--CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCS-CCCC---CC
T ss_pred CCCc---cchhhEEECcCCcccc--cCC--CCCCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCC-cCCc---cc
Confidence 4443 4789999999976653 333 24889999999999995 56 45689999999999999 4665 67
Q ss_pred CCCCEEeccCCcCcCCCChhh--hcCCCeEEeecCcCCCCCCccc
Q 004275 325 KKIDYIFLTNNSLSGTLPDWI--LTSEKNLDLSYNNFTESSPATC 367 (764)
Q Consensus 325 ~~L~~L~L~~N~l~g~~p~~~--~~~l~~L~Ls~N~l~~~~p~~~ 367 (764)
++|+.|+|++|+|+ .+|..+ .+.++.|+|++|++++.+|...
T Consensus 261 ~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l 304 (622)
T 3g06_A 261 SGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQAL 304 (622)
T ss_dssp TTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHH
T ss_pred ccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHH
Confidence 89999999999999 778877 4667899999999998877653
No 81
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.86 E-value=2e-21 Score=199.99 Aligned_cols=185 Identities=20% Similarity=0.232 Sum_probs=160.9
Q ss_pred CCceeccCCCCCCceeeEEEEEcCCCcccccCCccCCCCCCCCEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccC
Q 004275 70 GSNFTCDCTYSNNTVCHVTVILLKGFNLAGVIPEEFGNLTFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSI 149 (764)
Q Consensus 70 ~~gv~C~~~~~~~~~~~v~~L~L~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~ 149 (764)
|.|.+|.. ..+.++++++++. .+|..+. +.|++|+|++|.+++..|..|.++++|++|+|++|.+++..
T Consensus 7 ~~gC~C~~--------~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 75 (251)
T 3m19_A 7 VTGCTCNE--------GKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLS 75 (251)
T ss_dssp HHSSEEEG--------GGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCC
T ss_pred CCceEcCC--------CCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccC
Confidence 66777731 2456888988887 4666555 68999999999999988889999999999999999999888
Q ss_pred CcCcCCCCCCCEEEeeCCcCCCCCCccCCCCCCCcEEEccCccCCCCCcccccCCCCCcEEEccCccCCCcCcccccCCC
Q 004275 150 PLEIGDISTLEELVLEDNQLVGPLPENLGNLKSLRRILLSSNNFTGSIPESYGNLKNLTEFRIDGSNLTGRIPNFIGNWT 229 (764)
Q Consensus 150 p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~ 229 (764)
|..|..+++|++|+|++|++++..+..|..+++|++|+|++|++++..+..|..+++|++|++++|++++..+..+..++
T Consensus 76 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 155 (251)
T 3m19_A 76 AGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLT 155 (251)
T ss_dssp TTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCT
T ss_pred HhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCc
Confidence 88899999999999999999987778889999999999999999977777789999999999999999977777899999
Q ss_pred CCCEEeeeCCcCCCCCccchhcCCCCCEEEcCCCCC
Q 004275 230 KLDRLDLQGTSLEGPIPSTISQLKNLTELRISDLKG 265 (764)
Q Consensus 230 ~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~n~~ 265 (764)
+|++|+|++|++++..+..+..+++|+.|++++|..
T Consensus 156 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~ 191 (251)
T 3m19_A 156 NLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQF 191 (251)
T ss_dssp TCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCB
T ss_pred CCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCce
Confidence 999999999999988777888888888888888654
No 82
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.86 E-value=4e-24 Score=229.95 Aligned_cols=179 Identities=22% Similarity=0.233 Sum_probs=157.6
Q ss_pred eeEEEEEcCCCcccccCCccCCCCCCCCEEEccCCcCCcc-CchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEE
Q 004275 85 CHVTVILLKGFNLAGVIPEEFGNLTFLQEVDLSRNYFNGS-LPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELV 163 (764)
Q Consensus 85 ~~v~~L~L~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 163 (764)
.+++.++++++.+.+..+. +..+++|++|+|++|.+++. +|..+..+++|++|+|++|.+++..|..++.+++|++|+
T Consensus 70 ~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~ 148 (336)
T 2ast_B 70 QGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLN 148 (336)
T ss_dssp TTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEE
T ss_pred ccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEE
Confidence 4689999999999887665 66899999999999999876 888999999999999999999988999999999999999
Q ss_pred eeCC-cCCC-CCCccCCCCCCCcEEEccCc-cCCCC-CcccccCCC-CCcEEEccCc--cCC-CcCcccccCCCCCCEEe
Q 004275 164 LEDN-QLVG-PLPENLGNLKSLRRILLSSN-NFTGS-IPESYGNLK-NLTEFRIDGS--NLT-GRIPNFIGNWTKLDRLD 235 (764)
Q Consensus 164 Ls~N-~l~~-~~p~~l~~l~~L~~L~Ls~N-~l~~~-~p~~~~~l~-~L~~L~L~~n--~l~-~~~p~~~~~l~~L~~L~ 235 (764)
|++| .+++ .++..+.++++|++|++++| .+++. ++..+..++ +|++|++++| .++ +.+|..+..+++|++|+
T Consensus 149 L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~ 228 (336)
T 2ast_B 149 LSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLD 228 (336)
T ss_dssp CTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEE
T ss_pred CCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEe
Confidence 9999 6765 36666888999999999999 88864 677788999 9999999999 565 56777888999999999
Q ss_pred eeCCc-CCCCCccchhcCCCCCEEEcCCCC
Q 004275 236 LQGTS-LEGPIPSTISQLKNLTELRISDLK 264 (764)
Q Consensus 236 L~~N~-l~~~~p~~l~~l~~L~~L~L~~n~ 264 (764)
+++|. +++..+..+.++++|++|++++|.
T Consensus 229 l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~ 258 (336)
T 2ast_B 229 LSDSVMLKNDCFQEFFQLNYLQHLSLSRCY 258 (336)
T ss_dssp CTTCTTCCGGGGGGGGGCTTCCEEECTTCT
T ss_pred CCCCCcCCHHHHHHHhCCCCCCEeeCCCCC
Confidence 99999 777777888999999999998864
No 83
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.86 E-value=2.2e-24 Score=242.43 Aligned_cols=278 Identities=14% Similarity=0.143 Sum_probs=209.4
Q ss_pred eeEEEEEcCCCcccccCCcc-CCCCCCCCEEEccCCcCCc----cCchhhhcCCCCcEEecccCcCcccCCcCcC-CCC-
Q 004275 85 CHVTVILLKGFNLAGVIPEE-FGNLTFLQEVDLSRNYFNG----SLPKSFARLQNLTKLLILGNRLSGSIPLEIG-DIS- 157 (764)
Q Consensus 85 ~~v~~L~L~~~~l~g~~p~~-l~~L~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~-~l~- 157 (764)
.+++.|+|+++++....... +..+++|++|+|++|.++. .++..+..+++|++|+|++|.++...+..+. .++
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~ 82 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 82 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhh
Confidence 46889999998887544333 6778899999999999875 3567788889999999999998765443332 344
Q ss_pred ---CCCEEEeeCCcCCC----CCCccCCCCCCCcEEEccCccCCCCCccccc-----CCCCCcEEEccCccCCCc----C
Q 004275 158 ---TLEELVLEDNQLVG----PLPENLGNLKSLRRILLSSNNFTGSIPESYG-----NLKNLTEFRIDGSNLTGR----I 221 (764)
Q Consensus 158 ---~L~~L~Ls~N~l~~----~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~-----~l~~L~~L~L~~n~l~~~----~ 221 (764)
+|++|+|++|.++. .+|..+.++++|++|+|++|.+++..+..+. ..++|++|++++|.+++. +
T Consensus 83 ~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l 162 (461)
T 1z7x_W 83 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPL 162 (461)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHH
T ss_pred CCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHH
Confidence 69999999999874 4577888999999999999998754443332 356799999999998864 3
Q ss_pred cccccCCCCCCEEeeeCCcCCCCCccchh-----cCCCCCEEEcCCCCCCCCC---CC-CccCCcccccccccccccccc
Q 004275 222 PNFIGNWTKLDRLDLQGTSLEGPIPSTIS-----QLKNLTELRISDLKGSSSS---FP-NLQDMKKMERLILRNCLITGR 292 (764)
Q Consensus 222 p~~~~~l~~L~~L~L~~N~l~~~~p~~l~-----~l~~L~~L~L~~n~~~~~~---~~-~l~~l~~L~~L~Ls~N~l~~~ 292 (764)
+..+..+++|++|++++|.++...+..+. ..++|++|++++|.+.... ++ .+..+++|++|++++|.++..
T Consensus 163 ~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~ 242 (461)
T 1z7x_W 163 ASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDV 242 (461)
T ss_dssp HHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHH
T ss_pred HHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChH
Confidence 56667788999999999998755444443 2568999999987655432 12 256678999999999988754
Q ss_pred C-----CccccCCCCCCEEeccCCCCCCC----ccccccCCCCCCEEeccCCcCcCCCChhhh-------cCCCeEEeec
Q 004275 293 I-----PEYIEDMTDLKILDLSFNQLTGP----VPGILQNLKKIDYIFLTNNSLSGTLPDWIL-------TSEKNLDLSY 356 (764)
Q Consensus 293 ~-----p~~~~~l~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~-------~~l~~L~Ls~ 356 (764)
. +..+..+++|++|++++|++++. ++..+..+++|++|++++|.+++..+..+. +.++.|++++
T Consensus 243 ~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~ 322 (461)
T 1z7x_W 243 GMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKS 322 (461)
T ss_dssp HHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTT
T ss_pred HHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCC
Confidence 2 22334678999999999999854 577777889999999999998765444332 4678999999
Q ss_pred CcCCCC
Q 004275 357 NNFTES 362 (764)
Q Consensus 357 N~l~~~ 362 (764)
|.+++.
T Consensus 323 n~l~~~ 328 (461)
T 1z7x_W 323 CSFTAA 328 (461)
T ss_dssp SCCBGG
T ss_pred CCCchH
Confidence 988764
No 84
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.86 E-value=1.9e-21 Score=198.54 Aligned_cols=203 Identities=15% Similarity=0.212 Sum_probs=142.3
Q ss_pred cCCccCCCCCCCCEEEccCCcCCccCchhhhcCCCCcEEecccCc-CcccCCcCcCCCCCCCEEEeeC-CcCCCCCCccC
Q 004275 100 VIPEEFGNLTFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNR-LSGSIPLEIGDISTLEELVLED-NQLVGPLPENL 177 (764)
Q Consensus 100 ~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~-l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~l 177 (764)
.+|. +. ++|++|+|++|++++..+..|..+++|++|++++|. ++...+..|.++++|++|+|++ |++++..+..|
T Consensus 25 ~ip~-~~--~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f 101 (239)
T 2xwt_C 25 RIPS-LP--PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDAL 101 (239)
T ss_dssp SCCC-CC--TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSE
T ss_pred ccCC-CC--CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHh
Confidence 4565 43 389999999999987777788889999999999997 7766666788888899999988 88886666677
Q ss_pred CCCCCCcEEEccCccCCCCCcccccCCCCCc---EEEccCc-cCCCcCcccccCCCCCC-EEeeeCCcCCCCCccchhcC
Q 004275 178 GNLKSLRRILLSSNNFTGSIPESYGNLKNLT---EFRIDGS-NLTGRIPNFIGNWTKLD-RLDLQGTSLEGPIPSTISQL 252 (764)
Q Consensus 178 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~---~L~L~~n-~l~~~~p~~~~~l~~L~-~L~L~~N~l~~~~p~~l~~l 252 (764)
.++++|++|++++|++++ +|. +..+++|+ +|++++| .+++..+..|..+++|+ +|++++|+++ .+|..
T Consensus 102 ~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~---- 174 (239)
T 2xwt_C 102 KELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGY---- 174 (239)
T ss_dssp ECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTT----
T ss_pred CCCCCCCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHh----
Confidence 888888888888888875 554 66666666 7777776 66655555566666666 6666666655 22221
Q ss_pred CCCCEEEcCCCCCCCCCCCCccCCcccccccccccc-ccccCCccccCC-CCCCEEeccCCCCCCCccccccCCCCCCEE
Q 004275 253 KNLTELRISDLKGSSSSFPNLQDMKKMERLILRNCL-ITGRIPEYIEDM-TDLKILDLSFNQLTGPVPGILQNLKKIDYI 330 (764)
Q Consensus 253 ~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~N~-l~~~~p~~~~~l-~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L 330 (764)
.+.. ++|++|++++|+ +++..+..|..+ ++|+.|++++|++++ +|.. .+++|+.|
T Consensus 175 -------------------~~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~-l~~~--~~~~L~~L 231 (239)
T 2xwt_C 175 -------------------AFNG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTA-LPSK--GLEHLKEL 231 (239)
T ss_dssp -------------------TTTT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCC-CCCT--TCTTCSEE
T ss_pred -------------------hcCC-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCcccc-CChh--HhccCcee
Confidence 1222 456666666673 665556667777 777888888877774 3332 45667777
Q ss_pred eccCC
Q 004275 331 FLTNN 335 (764)
Q Consensus 331 ~L~~N 335 (764)
+++++
T Consensus 232 ~l~~~ 236 (239)
T 2xwt_C 232 IARNT 236 (239)
T ss_dssp ECTTC
T ss_pred eccCc
Confidence 77665
No 85
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.86 E-value=7.1e-22 Score=210.12 Aligned_cols=223 Identities=16% Similarity=0.155 Sum_probs=181.4
Q ss_pred eEEEEEcCCCcccccC-Cc--cCCCCCCCCEEEccCCcCCccCchhh--hcCCCCcEEecccCcCcccCC----cCcCCC
Q 004275 86 HVTVILLKGFNLAGVI-PE--EFGNLTFLQEVDLSRNYFNGSLPKSF--ARLQNLTKLLILGNRLSGSIP----LEIGDI 156 (764)
Q Consensus 86 ~v~~L~L~~~~l~g~~-p~--~l~~L~~L~~L~Ls~N~l~~~~p~~~--~~l~~L~~L~Ls~n~l~~~~p----~~~~~l 156 (764)
+++.+.+.+..+.... .. .+..+++|++|+|++|.+.+..|..+ ..+++|++|+|++|.+++..| ..+..+
T Consensus 65 ~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~ 144 (310)
T 4glp_A 65 RVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLK 144 (310)
T ss_dssp CCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBC
T ss_pred ceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhc
Confidence 3666777776654311 00 12235679999999999999999888 899999999999999997665 345679
Q ss_pred CCCCEEEeeCCcCCCCCCccCCCCCCCcEEEccCccCCCC--C--cccccCCCCCcEEEccCccCCCcCcc----cccCC
Q 004275 157 STLEELVLEDNQLVGPLPENLGNLKSLRRILLSSNNFTGS--I--PESYGNLKNLTEFRIDGSNLTGRIPN----FIGNW 228 (764)
Q Consensus 157 ~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~--~--p~~~~~l~~L~~L~L~~n~l~~~~p~----~~~~l 228 (764)
++|++|+|++|++.+..|..+..+++|++|+|++|++.+. + +..+..+++|++|++++|+++. ++. .+..+
T Consensus 145 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~~l 223 (310)
T 4glp_A 145 PGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET-PTGVCAALAAAG 223 (310)
T ss_dssp SCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC-HHHHHHHHHHHT
T ss_pred cCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc-hHHHHHHHHhcC
Confidence 9999999999999988888999999999999999998652 2 2334789999999999999973 333 35788
Q ss_pred CCCCEEeeeCCcCCCCCccchhcC---CCCCEEEcCCCCCCCCCCCC-ccCCccccccccccccccccCCccccCCCCCC
Q 004275 229 TKLDRLDLQGTSLEGPIPSTISQL---KNLTELRISDLKGSSSSFPN-LQDMKKMERLILRNCLITGRIPEYIEDMTDLK 304 (764)
Q Consensus 229 ~~L~~L~L~~N~l~~~~p~~l~~l---~~L~~L~L~~n~~~~~~~~~-l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 304 (764)
++|++|+|++|++++..|..+..+ ++|++|++++|++. .+|. +. ++|++|+|++|++++. |. +..+++|+
T Consensus 224 ~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~--~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~ 297 (310)
T 4glp_A 224 VQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE--QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVD 297 (310)
T ss_dssp CCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC--SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCS
T ss_pred CCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC--chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCcc
Confidence 999999999999998888888777 69999999998776 3343 32 7999999999999964 43 67889999
Q ss_pred EEeccCCCCCC
Q 004275 305 ILDLSFNQLTG 315 (764)
Q Consensus 305 ~L~Ls~N~l~g 315 (764)
.|++++|+++.
T Consensus 298 ~L~L~~N~l~~ 308 (310)
T 4glp_A 298 NLTLDGNPFLV 308 (310)
T ss_dssp CEECSSTTTSC
T ss_pred EEECcCCCCCC
Confidence 99999999974
No 86
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.86 E-value=6.5e-24 Score=233.13 Aligned_cols=234 Identities=19% Similarity=0.317 Sum_probs=178.1
Q ss_pred eeEEEEEcCCCccccc----CCccCCCCCCCCEEEccCC---cCCccCchhh-------hcCCCCcEEecccCcCcc---
Q 004275 85 CHVTVILLKGFNLAGV----IPEEFGNLTFLQEVDLSRN---YFNGSLPKSF-------ARLQNLTKLLILGNRLSG--- 147 (764)
Q Consensus 85 ~~v~~L~L~~~~l~g~----~p~~l~~L~~L~~L~Ls~N---~l~~~~p~~~-------~~l~~L~~L~Ls~n~l~~--- 147 (764)
.+++.|+|++|.+... ++..+..+++|++|+|++| ++.+.+|..+ ..+++|++|+|++|.+++
T Consensus 32 ~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~ 111 (386)
T 2ca6_A 32 DSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQ 111 (386)
T ss_dssp SCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTH
T ss_pred CCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHHH
Confidence 3689999999998876 3445889999999999996 5556677665 789999999999999987
Q ss_pred -cCCcCcCCCCCCCEEEeeCCcCCCCCCccC----CCC---------CCCcEEEccCccCC-CCCc---ccccCCCCCcE
Q 004275 148 -SIPLEIGDISTLEELVLEDNQLVGPLPENL----GNL---------KSLRRILLSSNNFT-GSIP---ESYGNLKNLTE 209 (764)
Q Consensus 148 -~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l----~~l---------~~L~~L~Ls~N~l~-~~~p---~~~~~l~~L~~ 209 (764)
.+|..+..+++|++|+|++|.++...+..+ ..+ ++|++|+|++|+++ +.++ ..+..+++|++
T Consensus 112 ~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~ 191 (386)
T 2ca6_A 112 EPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHT 191 (386)
T ss_dssp HHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCE
T ss_pred HHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCE
Confidence 578888999999999999999874433333 333 89999999999987 3444 46677888888
Q ss_pred EEccCccCCC-----cCcccccCCCCCCEEeeeCCcCC----CCCccchhcCCCCCEEEcCCCCCCCCCCCCccCCcccc
Q 004275 210 FRIDGSNLTG-----RIPNFIGNWTKLDRLDLQGTSLE----GPIPSTISQLKNLTELRISDLKGSSSSFPNLQDMKKME 280 (764)
Q Consensus 210 L~L~~n~l~~-----~~p~~~~~l~~L~~L~L~~N~l~----~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~ 280 (764)
|++++|.++. .+|..+..+++|+.|+|++|.++ +.+|..+..+++|+.|++++
T Consensus 192 L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~------------------ 253 (386)
T 2ca6_A 192 VKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLND------------------ 253 (386)
T ss_dssp EECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTT------------------
T ss_pred EECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCC------------------
Confidence 8888888872 33446777888888888888875 45566666666666666655
Q ss_pred cccccccccccc----CCccc--cCCCCCCEEeccCCCCCC----Cccccc-cCCCCCCEEeccCCcCcCCCC
Q 004275 281 RLILRNCLITGR----IPEYI--EDMTDLKILDLSFNQLTG----PVPGIL-QNLKKIDYIFLTNNSLSGTLP 342 (764)
Q Consensus 281 ~L~Ls~N~l~~~----~p~~~--~~l~~L~~L~Ls~N~l~g----~~p~~~-~~l~~L~~L~L~~N~l~g~~p 342 (764)
|.+++. +|..+ ..+++|+.|+|++|.+++ .+|..+ .++++|++|++++|++++..+
T Consensus 254 ------n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 254 ------CLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp ------CCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSH
T ss_pred ------CCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchh
Confidence 444433 34445 337888888888888886 477666 668889999999999887765
No 87
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.86 E-value=2.1e-21 Score=198.21 Aligned_cols=178 Identities=19% Similarity=0.197 Sum_probs=152.3
Q ss_pred eeEEEEEcCCCcccccCCccCCCCCCCCEEEccCCc-CCccCchhhhcCCCCcEEeccc-CcCcccCCcCcCCCCCCCEE
Q 004275 85 CHVTVILLKGFNLAGVIPEEFGNLTFLQEVDLSRNY-FNGSLPKSFARLQNLTKLLILG-NRLSGSIPLEIGDISTLEEL 162 (764)
Q Consensus 85 ~~v~~L~L~~~~l~g~~p~~l~~L~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~Ls~-n~l~~~~p~~~~~l~~L~~L 162 (764)
..++.|++++|++.+..+..|..+++|++|+|++|. ++...+..|..+++|++|++++ |.+++..+..|..+++|++|
T Consensus 31 ~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L 110 (239)
T 2xwt_C 31 PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFL 110 (239)
T ss_dssp TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEE
T ss_pred CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEE
Confidence 368999999999998888899999999999999997 8876677899999999999999 99997777889999999999
Q ss_pred EeeCCcCCCCCCccCCCCCCCc---EEEccCc-cCCCCCcccccCCCCCc-EEEccCccCCCcCcccccCCCCCCEEeee
Q 004275 163 VLEDNQLVGPLPENLGNLKSLR---RILLSSN-NFTGSIPESYGNLKNLT-EFRIDGSNLTGRIPNFIGNWTKLDRLDLQ 237 (764)
Q Consensus 163 ~Ls~N~l~~~~p~~l~~l~~L~---~L~Ls~N-~l~~~~p~~~~~l~~L~-~L~L~~n~l~~~~p~~~~~l~~L~~L~L~ 237 (764)
++++|++++ +|. +..+++|+ +|++++| ++++..+..|..+++|+ +|++++|+++ .+|......++|+.|+++
T Consensus 111 ~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~~~L~~L~L~ 187 (239)
T 2xwt_C 111 GIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNGTKLDAVYLN 187 (239)
T ss_dssp EEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTTTTTCEEEEEECT
T ss_pred eCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhhcCCCCCCEEEcC
Confidence 999999986 676 88888888 9999999 99877777899999999 9999999998 555544444899999999
Q ss_pred CCc-CCCCCccchhcC-CCCCEEEcCCCCC
Q 004275 238 GTS-LEGPIPSTISQL-KNLTELRISDLKG 265 (764)
Q Consensus 238 ~N~-l~~~~p~~l~~l-~~L~~L~L~~n~~ 265 (764)
+|+ +++..+..|..+ ++|+.|++++|++
T Consensus 188 ~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l 217 (239)
T 2xwt_C 188 KNKYLTVIDKDAFGGVYSGPSLLDVSQTSV 217 (239)
T ss_dssp TCTTCCEECTTTTTTCSBCCSEEECTTCCC
T ss_pred CCCCcccCCHHHhhccccCCcEEECCCCcc
Confidence 995 886666667766 6666666666443
No 88
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.85 E-value=7.7e-21 Score=201.88 Aligned_cols=192 Identities=22% Similarity=0.338 Sum_probs=92.2
Q ss_pred CCCCCCEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEeeCCcCCCCCCccCCCCCCCcEE
Q 004275 107 NLTFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVLEDNQLVGPLPENLGNLKSLRRI 186 (764)
Q Consensus 107 ~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L 186 (764)
.+++|++|++++|.++. +| .+..+++|++|+|++|.+++..+ +..+++|++|+|++|++++ ++ .+..+++|++|
T Consensus 39 ~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L 112 (308)
T 1h6u_A 39 DLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTL 112 (308)
T ss_dssp HHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEE
T ss_pred HcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEE
Confidence 45555555555555542 33 35555555555555555553222 5555555555555555543 22 34455555555
Q ss_pred EccCccCCCCCcccccCCCCCcEEEccCccCCCcCcccccCCCCCCEEeeeCCcCCCCCccchhcCCCCCEEEcCCCCCC
Q 004275 187 LLSSNNFTGSIPESYGNLKNLTEFRIDGSNLTGRIPNFIGNWTKLDRLDLQGTSLEGPIPSTISQLKNLTELRISDLKGS 266 (764)
Q Consensus 187 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~n~~~ 266 (764)
++++|++++ ++. +. .+++|++|++++|.+++..+ +..+++|+.|++++|.+.
T Consensus 113 ~l~~n~l~~-~~~-l~------------------------~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~ 164 (308)
T 1h6u_A 113 DLTSTQITD-VTP-LA------------------------GLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVS 164 (308)
T ss_dssp ECTTSCCCC-CGG-GT------------------------TCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCC
T ss_pred ECCCCCCCC-chh-hc------------------------CCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCC
Confidence 555555443 221 44 44444444444444443222 444444444444443222
Q ss_pred CCCCCCccCCccccccccccccccccCCccccCCCCCCEEeccCCCCCCCccccccCCCCCCEEeccCCcCc
Q 004275 267 SSSFPNLQDMKKMERLILRNCLITGRIPEYIEDMTDLKILDLSFNQLTGPVPGILQNLKKIDYIFLTNNSLS 338 (764)
Q Consensus 267 ~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~ 338 (764)
. ++.+..+++|+.|++++|++++..+ +..+++|++|++++|++++..+ +..+++|+.|++++|+++
T Consensus 165 ~--~~~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~ 230 (308)
T 1h6u_A 165 D--LTPLANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTIT 230 (308)
T ss_dssp C--CGGGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEE
T ss_pred C--ChhhcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeee
Confidence 1 1113333444444444455543222 4555666666666666664432 555666666666666554
No 89
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.85 E-value=3e-23 Score=225.80 Aligned_cols=233 Identities=17% Similarity=0.168 Sum_probs=164.0
Q ss_pred EEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCC----cCcCCCC-CCCEEEeeCCcCCCCCCccCCCC-----CC
Q 004275 113 EVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIP----LEIGDIS-TLEELVLEDNQLVGPLPENLGNL-----KS 182 (764)
Q Consensus 113 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p----~~~~~l~-~L~~L~Ls~N~l~~~~p~~l~~l-----~~ 182 (764)
+++|++|.+++.+|..+...++|++|+|++|.+++..+ ..+..++ +|++|+|++|.+++..+..+..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 46788899988888877777779999999999886655 6677787 88888888888887766666654 78
Q ss_pred CcEEEccCccCCCCCcccccC----C-CCCcEEEccCccCCCcCccccc----C-CCCCCEEeeeCCcCCCCCccchhcC
Q 004275 183 LRRILLSSNNFTGSIPESYGN----L-KNLTEFRIDGSNLTGRIPNFIG----N-WTKLDRLDLQGTSLEGPIPSTISQL 252 (764)
Q Consensus 183 L~~L~Ls~N~l~~~~p~~~~~----l-~~L~~L~L~~n~l~~~~p~~~~----~-l~~L~~L~L~~N~l~~~~p~~l~~l 252 (764)
|++|+|++|++++..+..+.. + ++|++|++++|.+++..+..+. . .++|++|+|++|.++...+..+...
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~ 161 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQI 161 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHH
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHH
Confidence 888888888887666654433 3 6777777777777665554332 2 2467777777777664333222110
Q ss_pred CCCCEEEcCCCCCCCCCCCCccCCc-cccccccccccccccCCcc----ccCC-CCCCEEeccCCCCCCC----cccccc
Q 004275 253 KNLTELRISDLKGSSSSFPNLQDMK-KMERLILRNCLITGRIPEY----IEDM-TDLKILDLSFNQLTGP----VPGILQ 322 (764)
Q Consensus 253 ~~L~~L~L~~n~~~~~~~~~l~~l~-~L~~L~Ls~N~l~~~~p~~----~~~l-~~L~~L~Ls~N~l~g~----~p~~~~ 322 (764)
+..++ +|++|+|++|++++..+.. +..+ ++|++|+|++|.+++. ++..+.
T Consensus 162 --------------------l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~ 221 (362)
T 3goz_A 162 --------------------LAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFS 221 (362)
T ss_dssp --------------------HHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHH
T ss_pred --------------------HhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHh
Confidence 11222 5666777777777655543 3344 5999999999999863 455565
Q ss_pred C-CCCCCEEeccCCcCcCCCChhh------hcCCCeEEeecCcCCCCCCc
Q 004275 323 N-LKKIDYIFLTNNSLSGTLPDWI------LTSEKNLDLSYNNFTESSPA 365 (764)
Q Consensus 323 ~-l~~L~~L~L~~N~l~g~~p~~~------~~~l~~L~Ls~N~l~~~~p~ 365 (764)
. .++|+.|+|++|.+++..+..+ .+.++.|++++|.+++..+.
T Consensus 222 ~~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~ 271 (362)
T 3goz_A 222 SIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKE 271 (362)
T ss_dssp HSCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHH
T ss_pred cCCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHH
Confidence 5 4599999999999997655333 35678999999997776554
No 90
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.84 E-value=1.5e-20 Score=199.61 Aligned_cols=192 Identities=23% Similarity=0.368 Sum_probs=151.6
Q ss_pred eeeEEEEEcCCCcccccCCccCCCCCCCCEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEE
Q 004275 84 VCHVTVILLKGFNLAGVIPEEFGNLTFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELV 163 (764)
Q Consensus 84 ~~~v~~L~L~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 163 (764)
..+++.|+++++++.. +| .+..+++|++|+|++|.+++. +. +..+++|++|+|++|.+++ ++ .+..+++|++|+
T Consensus 40 l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~-~~-~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~ 113 (308)
T 1h6u_A 40 LDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDL-AP-LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTLD 113 (308)
T ss_dssp HHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEE
T ss_pred cCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCC-hh-HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEEE
Confidence 3479999999999875 44 688999999999999999864 44 9999999999999999985 33 689999999999
Q ss_pred eeCCcCCCCCCccCCCCCCCcEEEccCccCCCCCcccccCCCCCcEEEccCccCCCcCcccccCCCCCCEEeeeCCcCCC
Q 004275 164 LEDNQLVGPLPENLGNLKSLRRILLSSNNFTGSIPESYGNLKNLTEFRIDGSNLTGRIPNFIGNWTKLDRLDLQGTSLEG 243 (764)
Q Consensus 164 Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 243 (764)
|++|++++. + .+..+++|++|++++|++++..+ +..+++|++|++++|.+++..+ +..+++|+.|++++|++++
T Consensus 114 l~~n~l~~~-~-~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~ 187 (308)
T 1h6u_A 114 LTSTQITDV-T-PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKISD 187 (308)
T ss_dssp CTTSCCCCC-G-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC
T ss_pred CCCCCCCCc-h-hhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCccCc
Confidence 999999864 4 38999999999999999986443 8889999999999998886433 7888888888888888875
Q ss_pred CCccchhcCCCCCEEEcCCCCCCCCCCCCccCCccccccccccccccccCCccccCCCCCCEEeccCCCCCC
Q 004275 244 PIPSTISQLKNLTELRISDLKGSSSSFPNLQDMKKMERLILRNCLITGRIPEYIEDMTDLKILDLSFNQLTG 315 (764)
Q Consensus 244 ~~p~~l~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g 315 (764)
..+ +..+++|++|++++ |++++..| +..+++|+.|++++|++++
T Consensus 188 ~~~--l~~l~~L~~L~L~~------------------------N~l~~~~~--l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 188 ISP--LASLPNLIEVHLKN------------------------NQISDVSP--LANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp CGG--GGGCTTCCEEECTT------------------------SCCCBCGG--GTTCTTCCEEEEEEEEEEC
T ss_pred Chh--hcCCCCCCEEEccC------------------------CccCcccc--ccCCCCCCEEEccCCeeec
Confidence 433 55555555555555 44443322 5566677777777776663
No 91
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.83 E-value=5.1e-21 Score=218.48 Aligned_cols=217 Identities=24% Similarity=0.309 Sum_probs=139.4
Q ss_pred CCCCCCCCCCCCCCcccccCCCCCce-eccCCCCCCceeeEEEEEcCCCcccccCCccCCCCCCCCEEEccCCcCCccCc
Q 004275 48 NGQVNQTSCTEGSWNVTIDDSNGSNF-TCDCTYSNNTVCHVTVILLKGFNLAGVIPEEFGNLTFLQEVDLSRNYFNGSLP 126 (764)
Q Consensus 48 ~w~~~~~~C~~~~~~~~~~~~~~~gv-~C~~~~~~~~~~~v~~L~L~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~p 126 (764)
.|..+.++|... ...|.++ .|.+. +++.|+|+++++.+ +|..+. ++|++|+|++|.|+ .+|
T Consensus 35 ~W~~~~~~~~~~-------~~~~~~l~~C~~~-------~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip 96 (571)
T 3cvr_A 35 KWEKQALPGENR-------NEAVSLLKECLIN-------QFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP 96 (571)
T ss_dssp HHHTTCCTTCCH-------HHHHHHHHHHHHT-------TCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC
T ss_pred HHhccCCccccc-------cchhhhccccccC-------CccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc
Confidence 355455677421 0027788 67542 58889999999887 776663 78999999999988 577
Q ss_pred hhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEeeCCcCCCCCCccCCCCCCCcEEEccCccCCCCCcccccCCCC
Q 004275 127 KSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVLEDNQLVGPLPENLGNLKSLRRILLSSNNFTGSIPESYGNLKN 206 (764)
Q Consensus 127 ~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 206 (764)
..+++|++|+|++|.+++ +|. +.. +|++|+|++|++++ +|. .+++|+.|+|++|++++ +|. .+++
T Consensus 97 ---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~ 161 (571)
T 3cvr_A 97 ---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTS 161 (571)
T ss_dssp ---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTT
T ss_pred ---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCC
Confidence 457888888888888886 676 655 88888888888876 555 57788888888888875 554 4667
Q ss_pred CcEEEccCccCCCcCcccccCCCCCCEEeeeCCcCCCCCccchhcCCCCCEEEcCCCCCCCCCCCCccCCcccccccccc
Q 004275 207 LTEFRIDGSNLTGRIPNFIGNWTKLDRLDLQGTSLEGPIPSTISQLKNLTELRISDLKGSSSSFPNLQDMKKMERLILRN 286 (764)
Q Consensus 207 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~ 286 (764)
|++|++++|.+++ +|. +. ++|+.|+|++|+|+ .+|. +.. +| ....+.|+.|+|++
T Consensus 162 L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L-----------------~~~~~~L~~L~Ls~ 216 (571)
T 3cvr_A 162 LEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SLPA-VPV--RN-----------------HHSEETEIFFRCRE 216 (571)
T ss_dssp CCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SCCC-CC---------------------------CCEEEECCS
T ss_pred cCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-chhh-HHH--hh-----------------hcccccceEEecCC
Confidence 7777777777765 555 44 66777777777666 3443 221 11 01112235555555
Q ss_pred ccccccCCccccCCCCCCEEeccCCCCCCCccccccC
Q 004275 287 CLITGRIPEYIEDMTDLKILDLSFNQLTGPVPGILQN 323 (764)
Q Consensus 287 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ 323 (764)
|+|+ .+|..+..+++|+.|+|++|.+++.+|..+..
T Consensus 217 N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~ 252 (571)
T 3cvr_A 217 NRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQ 252 (571)
T ss_dssp SCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHH
T ss_pred Ccce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHH
Confidence 5555 34544444555555555555555555544443
No 92
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.83 E-value=8e-20 Score=182.29 Aligned_cols=181 Identities=18% Similarity=0.179 Sum_probs=113.2
Q ss_pred EEEEcCCCcccccCCccCCCCCCCCEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEeeCC
Q 004275 88 TVILLKGFNLAGVIPEEFGNLTFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVLEDN 167 (764)
Q Consensus 88 ~~L~L~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N 167 (764)
+.++.+++++.. +|..+ .++|++|+|++|.+++..+..|..+++|++|++++|++++..+..|..+++|++|+|++|
T Consensus 10 ~~v~c~~~~l~~-~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 86 (208)
T 2o6s_A 10 TTVECYSQGRTS-VPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTN 86 (208)
T ss_dssp TEEECCSSCCSS-CCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCccC-CCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCC
Confidence 346666666653 34333 357788888888877655566677777777777777777555555666777777777777
Q ss_pred cCCCCCCccCCCCCCCcEEEccCccCCCCCcccccCCCCCcEEEccCccCCCcCcccccCCCCCCEEeeeCCcCCCCCcc
Q 004275 168 QLVGPLPENLGNLKSLRRILLSSNNFTGSIPESYGNLKNLTEFRIDGSNLTGRIPNFIGNWTKLDRLDLQGTSLEGPIPS 247 (764)
Q Consensus 168 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 247 (764)
++++..+..|.++++|++|++++|++++..+..|..+++|++|++++|.+++.. +.
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~------------------------~~ 142 (208)
T 2o6s_A 87 QLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVP------------------------DG 142 (208)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCC------------------------TT
T ss_pred cCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeC------------------------HH
Confidence 766555455566666666666666666544444555555555555555554433 33
Q ss_pred chhcCCCCCEEEcCCCCCCCCCCCCccCCccccccccccccccccCCccccCCCC
Q 004275 248 TISQLKNLTELRISDLKGSSSSFPNLQDMKKMERLILRNCLITGRIPEYIEDMTD 302 (764)
Q Consensus 248 ~l~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 302 (764)
.+..+++|+.|++++|.. ...+++|++|+++.|+++|.+|..++.++.
T Consensus 143 ~~~~l~~L~~L~l~~N~~-------~~~~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 143 VFDRLTSLQYIWLHDNPW-------DCTCPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp TTTTCTTCCEEECCSCCB-------CCCTTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred HhccCCCccEEEecCCCe-------ecCCCCHHHHHHHHHhCCceeeccCccccC
Confidence 344445555555554321 123467888899999999999988776654
No 93
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.82 E-value=8.5e-20 Score=197.51 Aligned_cols=238 Identities=18% Similarity=0.111 Sum_probs=162.8
Q ss_pred EEcCCCcccccCCccCCCCCCCCEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCc-CcCCCCCCCE-EEeeCC
Q 004275 90 ILLKGFNLAGVIPEEFGNLTFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPL-EIGDISTLEE-LVLEDN 167 (764)
Q Consensus 90 L~L~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~-~~~~l~~L~~-L~Ls~N 167 (764)
++.++++++ .+|..+ .+++++|+|++|+|+...+..|.++++|++|+|++|++.+.+|. .|.++++|++ +++..|
T Consensus 14 v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N 90 (350)
T 4ay9_X 14 FLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKAN 90 (350)
T ss_dssp EEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEET
T ss_pred EEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCC
Confidence 445566666 467665 36899999999999865556899999999999999998776664 6788988775 667789
Q ss_pred cCCCCCCccCCCCCCCcEEEccCccCCCCCcccccCCCCCcEEEccC-ccCCCcCcccccCCC-CCCEEeeeCCcCCCCC
Q 004275 168 QLVGPLPENLGNLKSLRRILLSSNNFTGSIPESYGNLKNLTEFRIDG-SNLTGRIPNFIGNWT-KLDRLDLQGTSLEGPI 245 (764)
Q Consensus 168 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~-n~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~ 245 (764)
+++...|..|..+++|++|++++|+++...+..+....++..|++.+ +++....+..|..+. .++.|++++|+++. +
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~-i 169 (350)
T 4ay9_X 91 NLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQE-I 169 (350)
T ss_dssp TCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCE-E
T ss_pred cccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccC-C
Confidence 99887788899999999999999999877776777777888888865 556654455566654 57888999998884 4
Q ss_pred ccchhcCCCCCEEEcCCCCCCC-CCCCCccCCccccccccccccccccCCccccCCCCCCEEeccCCCCCCCccccccCC
Q 004275 246 PSTISQLKNLTELRISDLKGSS-SSFPNLQDMKKMERLILRNCLITGRIPEYIEDMTDLKILDLSFNQLTGPVPGILQNL 324 (764)
Q Consensus 246 p~~l~~l~~L~~L~L~~n~~~~-~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l 324 (764)
|.......+|+.|++.+++... .....|..+++|++|++++|+++...+.. +.+|+.|.+.++.--..+| .+.++
T Consensus 170 ~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~---~~~L~~L~~l~~~~l~~lP-~l~~l 245 (350)
T 4ay9_X 170 HNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYG---LENLKKLRARSTYNLKKLP-TLEKL 245 (350)
T ss_dssp CTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSS---CTTCCEEECTTCTTCCCCC-CTTTC
T ss_pred ChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhh---hccchHhhhccCCCcCcCC-CchhC
Confidence 4444455667777776533322 22223566666666666666666332222 3344444443332222444 24555
Q ss_pred CCCCEEeccCC
Q 004275 325 KKIDYIFLTNN 335 (764)
Q Consensus 325 ~~L~~L~L~~N 335 (764)
++|+.+++.++
T Consensus 246 ~~L~~l~l~~~ 256 (350)
T 4ay9_X 246 VALMEASLTYP 256 (350)
T ss_dssp CSCCEEECSCH
T ss_pred cChhhCcCCCC
Confidence 66666655543
No 94
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.82 E-value=7.1e-20 Score=209.08 Aligned_cols=184 Identities=21% Similarity=0.329 Sum_probs=106.7
Q ss_pred CCcEEecccCcCcccCCcCcCCCCCCCEEEeeCCcCCCCCCccCCCCCCCcEEEccCccCCCCCcccccCCCCCcEEEcc
Q 004275 134 NLTKLLILGNRLSGSIPLEIGDISTLEELVLEDNQLVGPLPENLGNLKSLRRILLSSNNFTGSIPESYGNLKNLTEFRID 213 (764)
Q Consensus 134 ~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 213 (764)
+|+.|+|++|.+++ +|..+. ++|++|+|++|+++ .+| ..+++|++|+|++|++++ +|. +.. +|++|+++
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls 128 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVD 128 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECC
T ss_pred CccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECC
Confidence 44455555554443 444332 44555555555544 333 234455555555555543 343 332 45555555
Q ss_pred CccCCCcCcccccCCCCCCEEeeeCCcCCCCCccchhcCCCCCEEEcCCCCCCCCCCCCccCCccccccccccccccccC
Q 004275 214 GSNLTGRIPNFIGNWTKLDRLDLQGTSLEGPIPSTISQLKNLTELRISDLKGSSSSFPNLQDMKKMERLILRNCLITGRI 293 (764)
Q Consensus 214 ~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~ 293 (764)
+|++++ +|. .+++|+.|+|++|.+++ +|. .+++|+.|++++|.+.. +|.+. ++|+.|+|++|+|+ .+
T Consensus 129 ~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~--lp~l~--~~L~~L~Ls~N~L~-~l 195 (571)
T 3cvr_A 129 NNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF--LPELP--ESLEALDVSTNLLE-SL 195 (571)
T ss_dssp SSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC--CCCCC--TTCCEEECCSSCCS-SC
T ss_pred CCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC--cchhh--CCCCEEECcCCCCC-ch
Confidence 555554 333 34555555555555554 333 34555555555544332 22232 56667777777777 55
Q ss_pred CccccCCCCC-------CEEeccCCCCCCCccccccCCCCCCEEeccCCcCcCCCChhh
Q 004275 294 PEYIEDMTDL-------KILDLSFNQLTGPVPGILQNLKKIDYIFLTNNSLSGTLPDWI 345 (764)
Q Consensus 294 p~~~~~l~~L-------~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~ 345 (764)
|. +.. +| +.|+|++|+|+ .+|..+..+++|+.|+|++|++++.+|..+
T Consensus 196 p~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l 250 (571)
T 3cvr_A 196 PA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESL 250 (571)
T ss_dssp CC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHH
T ss_pred hh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHH
Confidence 55 443 56 99999999999 688878889999999999999999998876
No 95
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.80 E-value=1.1e-19 Score=181.30 Aligned_cols=178 Identities=19% Similarity=0.200 Sum_probs=154.4
Q ss_pred CCceeccCCCC----CCceeeEEEEEcCCCcccccCCccCCCCCCCCEEEccCCcCCccCchhhhcCCCCcEEecccCcC
Q 004275 70 GSNFTCDCTYS----NNTVCHVTVILLKGFNLAGVIPEEFGNLTFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRL 145 (764)
Q Consensus 70 ~~gv~C~~~~~----~~~~~~v~~L~L~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l 145 (764)
|.++.|..... .....+++.|++++|++.+..+..|..+++|++|+|++|++++..+..|..+++|++|+|++|.+
T Consensus 9 ~~~v~c~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l 88 (208)
T 2o6s_A 9 GTTVECYSQGRTSVPTGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQL 88 (208)
T ss_dssp TTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred CCEEEecCCCccCCCCCCCCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcC
Confidence 88888864321 11234699999999999987777789999999999999999977777789999999999999999
Q ss_pred cccCCcCcCCCCCCCEEEeeCCcCCCCCCccCCCCCCCcEEEccCccCCCCCcccccCCCCCcEEEccCccCCCcCcccc
Q 004275 146 SGSIPLEIGDISTLEELVLEDNQLVGPLPENLGNLKSLRRILLSSNNFTGSIPESYGNLKNLTEFRIDGSNLTGRIPNFI 225 (764)
Q Consensus 146 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~ 225 (764)
++..+..|..+++|++|+|++|++++..+..+.++++|++|++++|++++..+..+..+++|++|++++|.+.+
T Consensus 89 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~------ 162 (208)
T 2o6s_A 89 QSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC------ 162 (208)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC------
T ss_pred CccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeec------
Confidence 97777778999999999999999998777778999999999999999998777779999999999999998765
Q ss_pred cCCCCCCEEeeeCCcCCCCCccchhcCCC
Q 004275 226 GNWTKLDRLDLQGTSLEGPIPSTISQLKN 254 (764)
Q Consensus 226 ~~l~~L~~L~L~~N~l~~~~p~~l~~l~~ 254 (764)
.+++|+.|+++.|+++|.+|..++.++.
T Consensus 163 -~~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 163 -TCPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp -CTTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred -CCCCHHHHHHHHHhCCceeeccCccccC
Confidence 4568999999999999999998876654
No 96
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.80 E-value=3.9e-19 Score=192.26 Aligned_cols=238 Identities=16% Similarity=0.131 Sum_probs=150.0
Q ss_pred CEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEeeCCcCCCCCCc-cCCCCCCCcE-EEcc
Q 004275 112 QEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVLEDNQLVGPLPE-NLGNLKSLRR-ILLS 189 (764)
Q Consensus 112 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~l~~l~~L~~-L~Ls 189 (764)
++++.++++++ .+|..+ .+++++|+|++|+++...+..|.++++|++|+|++|++.+.+|. .|.++++|+. +.+.
T Consensus 12 ~~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~ 88 (350)
T 4ay9_X 12 RVFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 88 (350)
T ss_dssp TEEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEE
T ss_pred CEEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhccc
Confidence 56788888887 577665 36788999999998855556788889999999999888766654 5678887765 5666
Q ss_pred CccCCCCCcccccCCCCCcEEEccCccCCCcCcccccCCCCCCEEeeeC-CcCCCCCccchhcCC-CCCEEEcCCCCCCC
Q 004275 190 SNNFTGSIPESYGNLKNLTEFRIDGSNLTGRIPNFIGNWTKLDRLDLQG-TSLEGPIPSTISQLK-NLTELRISDLKGSS 267 (764)
Q Consensus 190 ~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~l~~l~-~L~~L~L~~n~~~~ 267 (764)
.|+++...|..|..+++|++|++++|+++...+..+....++..|++.+ +++....+..|..+. .++.|++++|++..
T Consensus 89 ~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~ 168 (350)
T 4ay9_X 89 ANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQE 168 (350)
T ss_dssp ETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCE
T ss_pred CCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccC
Confidence 7888877777888888888888888888866666666666777777765 455544444555543 46667777655443
Q ss_pred CCCCCccCCcccccccccc-ccccccCCccccCCCCCCEEeccCCCCCCCccccccCCCCCCEEeccCCcCcCCCCh-hh
Q 004275 268 SSFPNLQDMKKMERLILRN-CLITGRIPEYIEDMTDLKILDLSFNQLTGPVPGILQNLKKIDYIFLTNNSLSGTLPD-WI 345 (764)
Q Consensus 268 ~~~~~l~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~-~~ 345 (764)
.. +.....++|++|++++ |.++...+..|..+++|++||+++|+|+...+..+.+ |+.|.+.++.--..+|. .-
T Consensus 169 i~-~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~---L~~L~~l~~~~l~~lP~l~~ 244 (350)
T 4ay9_X 169 IH-NSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLEN---LKKLRARSTYNLKKLPTLEK 244 (350)
T ss_dssp EC-TTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCTT---CCEEECTTCTTCCCCCCTTT
T ss_pred CC-hhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhhcc---chHhhhccCCCcCcCCCchh
Confidence 22 1222345666666654 4444333345566667777777777766433333333 33333333322224443 11
Q ss_pred hcCCCeEEeec
Q 004275 346 LTSEKNLDLSY 356 (764)
Q Consensus 346 ~~~l~~L~Ls~ 356 (764)
+..++.+++++
T Consensus 245 l~~L~~l~l~~ 255 (350)
T 4ay9_X 245 LVALMEASLTY 255 (350)
T ss_dssp CCSCCEEECSC
T ss_pred CcChhhCcCCC
Confidence 34445555543
No 97
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.77 E-value=3.9e-18 Score=172.78 Aligned_cols=143 Identities=22% Similarity=0.258 Sum_probs=123.2
Q ss_pred cCCccCCCCCCCCEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEeeCCcCCCCCCccCCC
Q 004275 100 VIPEEFGNLTFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVLEDNQLVGPLPENLGN 179 (764)
Q Consensus 100 ~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~ 179 (764)
.+|..+. ++|++|+|++|.+++..|..|..+++|++|+|++|+++...+..|..+++|++|+|++|++++..+..|..
T Consensus 33 ~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~ 110 (229)
T 3e6j_A 33 SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDR 110 (229)
T ss_dssp SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTT
T ss_pred ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCc
Confidence 4555443 88999999999999988999999999999999999998666667889999999999999999777777889
Q ss_pred CCCCcEEEccCccCCCCCcccccCCCCCcEEEccCccCCCcCcccccCCCCCCEEeeeCCcCCCCC
Q 004275 180 LKSLRRILLSSNNFTGSIPESYGNLKNLTEFRIDGSNLTGRIPNFIGNWTKLDRLDLQGTSLEGPI 245 (764)
Q Consensus 180 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 245 (764)
+++|++|+|++|+++ .+|..+..+++|++|++++|++++..+..+..+++|+.|++++|.+....
T Consensus 111 l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c 175 (229)
T 3e6j_A 111 LVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCEC 175 (229)
T ss_dssp CTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTB
T ss_pred chhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCc
Confidence 999999999999998 67888889999999999999998776677888888999999988887543
No 98
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.77 E-value=9.8e-20 Score=215.27 Aligned_cols=258 Identities=22% Similarity=0.219 Sum_probs=114.1
Q ss_pred CChhHHHHHHHHHHhcCCCCCCCCCCCCCCCCCc-ccccCCCCCceeccCCCCCCceeeEEEEEcCCCcccccCCccCCC
Q 004275 29 LPDDEVQTLQSIFRKLNFRNGQVNQTSCTEGSWN-VTIDDSNGSNFTCDCTYSNNTVCHVTVILLKGFNLAGVIPEEFGN 107 (764)
Q Consensus 29 ~~~~e~~aL~~~~~~~~~~~w~~~~~~C~~~~~~-~~~~~~~~~gv~C~~~~~~~~~~~v~~L~L~~~~l~g~~p~~l~~ 107 (764)
+.+.+.++++++.+.+....|..... |. .......|.+.++. ..+++.|+|.++++... +..+
T Consensus 129 ~~~~~~~~l~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~s-------~~~~~~l~L~~n~~~~~-~~~~-- 192 (727)
T 4b8c_D 129 LVDCTKQALMEMADTLTDSKTAKKQQ------PTGDSTPSGTATNSAVS-------TPLTPKIELFANGKDEA-NQAL-- 192 (727)
T ss_dssp ---CCCHHHHHHHHHHHHHHTTC---------------------------------------------------------
T ss_pred ccccchhhhhhhhhhcccccCcccCC------CcCCCCccccCCCceec-------CCccceEEeeCCCCCcc-hhhH--
Confidence 45567899999998875444432210 00 00001125555552 24689999988887663 3333
Q ss_pred CCCCCEEEccCCcCCc---------cCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEeeCCcCCCCCCccCC
Q 004275 108 LTFLQEVDLSRNYFNG---------SLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVLEDNQLVGPLPENLG 178 (764)
Q Consensus 108 L~~L~~L~Ls~N~l~~---------~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~ 178 (764)
|+.++|+.|.+.+ ..|+.|..+++|+.|+|++|.+. .+|..+..+++|++|+|++|.|+ .+|..|+
T Consensus 193 ---l~~l~Ls~~~i~~~~~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~ 267 (727)
T 4b8c_D 193 ---LQHKKLSQYSIDEDDDIENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIK 267 (727)
T ss_dssp --------------------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGG
T ss_pred ---hhcCccCcccccCccccccceecChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhh
Confidence 3334444443332 34666777777777777777776 66666667777777777777777 6777777
Q ss_pred CCCCCcEEEccCccCCCCCcccccCCCCCcEEEccCccCCCcCcccccCCCCCCEEeeeCCcCCCCCccchhcCCCCCEE
Q 004275 179 NLKSLRRILLSSNNFTGSIPESYGNLKNLTEFRIDGSNLTGRIPNFIGNWTKLDRLDLQGTSLEGPIPSTISQLKNLTEL 258 (764)
Q Consensus 179 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L 258 (764)
+|++|++|+|++|+|+ .+|..|+++++|++|+|++|.++ .+|..|+.+++|+.|+|++|.+++.+|..+..+.
T Consensus 268 ~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~----- 340 (727)
T 4b8c_D 268 NLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKS----- 340 (727)
T ss_dssp GGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHH-----
T ss_pred CCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcc-----
Confidence 7777777777777777 56777777777777777777776 5666677777777777777777766666554321
Q ss_pred EcCCCCCCCCCCCCccCCccccccccccccccccCCccccCCCCCCEEeccCC--------CCCCCccccccCCCCCCEE
Q 004275 259 RISDLKGSSSSFPNLQDMKKMERLILRNCLITGRIPEYIEDMTDLKILDLSFN--------QLTGPVPGILQNLKKIDYI 330 (764)
Q Consensus 259 ~L~~n~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N--------~l~g~~p~~~~~l~~L~~L 330 (764)
..+..|+|++|.+++.+|. .|+.|+++.| .+.+..+..+..+..+...
T Consensus 341 ------------------~~~~~l~l~~N~l~~~~p~------~l~~l~l~~n~~~~~~~~~l~~~~~~~~~~l~~~~~~ 396 (727)
T 4b8c_D 341 ------------------VTGLIFYLRDNRPEIPLPH------ERRFIEINTDGEPQREYDSLQQSTEHLATDLAKRTFT 396 (727)
T ss_dssp ------------------HHHHHHHHHHCCCCCCCCC------C------------------------------------
T ss_pred ------------------hhhhHHhhccCcccCcCcc------ccceeEeecccccccccCCccccccchhhccccccee
Confidence 1123467888888877775 3455666666 2333333334444455555
Q ss_pred eccCCcCc
Q 004275 331 FLTNNSLS 338 (764)
Q Consensus 331 ~L~~N~l~ 338 (764)
.++.|-+.
T Consensus 397 ~ls~Nil~ 404 (727)
T 4b8c_D 397 VLSYNTLC 404 (727)
T ss_dssp -----CCC
T ss_pred eeeccccc
Confidence 55555544
No 99
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.76 E-value=2.3e-18 Score=198.68 Aligned_cols=173 Identities=24% Similarity=0.383 Sum_probs=115.3
Q ss_pred CCCCCCCCEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEeeCCcCCCCCCccCCCCCCCc
Q 004275 105 FGNLTFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVLEDNQLVGPLPENLGNLKSLR 184 (764)
Q Consensus 105 l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~ 184 (764)
+..|++|+.|+|++|.+.. +| .+..+++|+.|+|++|.+++..| +..+++|+.|+|++|.+.+ +| .+..+++|+
T Consensus 39 ~~~L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~ 112 (605)
T 1m9s_A 39 QNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLK 112 (605)
T ss_dssp HHHHTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCC
T ss_pred hhcCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCC
Confidence 3456677777777777763 33 47777777777777777775444 6777777777777777764 33 577777777
Q ss_pred EEEccCccCCCCCcccccCCCCCcEEEccCccCCCcCcccccCCCCCCEEeeeCCcCCCCCccchhcCCCCCEEEcCCCC
Q 004275 185 RILLSSNNFTGSIPESYGNLKNLTEFRIDGSNLTGRIPNFIGNWTKLDRLDLQGTSLEGPIPSTISQLKNLTELRISDLK 264 (764)
Q Consensus 185 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~n~ 264 (764)
.|+|++|++++ + ..+..+++|+.|+|++|.+++. ..+..+++|+.|+|++|.+++..| +..+++|+.|+|++|.
T Consensus 113 ~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~ 186 (605)
T 1m9s_A 113 SLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNH 186 (605)
T ss_dssp EEECTTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSC
T ss_pred EEEecCCCCCC-C-ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCC
Confidence 77777777764 2 3467777777777777777654 456777777777777777776544 6666777777776654
Q ss_pred CCCCCCCCccCCccccccccccccccc
Q 004275 265 GSSSSFPNLQDMKKMERLILRNCLITG 291 (764)
Q Consensus 265 ~~~~~~~~l~~l~~L~~L~Ls~N~l~~ 291 (764)
+.. ++.+..+++|+.|+|++|.+++
T Consensus 187 i~~--l~~l~~l~~L~~L~L~~N~l~~ 211 (605)
T 1m9s_A 187 ISD--LRALAGLKNLDVLELFSQECLN 211 (605)
T ss_dssp CCB--CGGGTTCTTCSEEECCSEEEEC
T ss_pred CCC--ChHHccCCCCCEEEccCCcCcC
Confidence 432 2445556666666666666654
No 100
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.76 E-value=1.7e-20 Score=217.57 Aligned_cols=149 Identities=12% Similarity=0.030 Sum_probs=74.4
Q ss_pred EEEEEcCCCccccc----CCccCCCCCCCCEEEccCCcCC----ccCchhhhcCCCCcEEecccCcCcccCCcCc-----
Q 004275 87 VTVILLKGFNLAGV----IPEEFGNLTFLQEVDLSRNYFN----GSLPKSFARLQNLTKLLILGNRLSGSIPLEI----- 153 (764)
Q Consensus 87 v~~L~L~~~~l~g~----~p~~l~~L~~L~~L~Ls~N~l~----~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~----- 153 (764)
++.|+|++|.+.+. ++..+..+++|++|+|++|.++ +.++..+.++++|++|+|++|.+.+ +|..+
T Consensus 166 L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~ 244 (592)
T 3ogk_B 166 IKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAAN 244 (592)
T ss_dssp CSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTT
T ss_pred CCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhH
Confidence 45555555554333 2222334555555566555554 2233444555666666666655442 22223
Q ss_pred ----------------------CCCCCCCEEEeeCCcCCCCCCccCCCCCCCcEEEccCccCCCCCc-ccccCCCCCcEE
Q 004275 154 ----------------------GDISTLEELVLEDNQLVGPLPENLGNLKSLRRILLSSNNFTGSIP-ESYGNLKNLTEF 210 (764)
Q Consensus 154 ----------------------~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L 210 (764)
..+++|+.|+++++. .+.+|..+..+++|++|+|++|.+++... ..+..+++|++|
T Consensus 245 L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~-~~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L 323 (592)
T 3ogk_B 245 LEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMG-PNEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVL 323 (592)
T ss_dssp CCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCC-TTTGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEE
T ss_pred HHhhcccccccccchHHHHHHhhccccccccCccccc-hhHHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEE
Confidence 333333333333321 22445555667788888888887654332 234566666666
Q ss_pred EccCccCCCcCcccccCCCCCCEEeee
Q 004275 211 RIDGSNLTGRIPNFIGNWTKLDRLDLQ 237 (764)
Q Consensus 211 ~L~~n~l~~~~p~~~~~l~~L~~L~L~ 237 (764)
+++++-..+.++.....+++|++|+++
T Consensus 324 ~L~~~~~~~~l~~~~~~~~~L~~L~L~ 350 (592)
T 3ogk_B 324 ETRNVIGDRGLEVLAQYCKQLKRLRIE 350 (592)
T ss_dssp EEEGGGHHHHHHHHHHHCTTCCEEEEE
T ss_pred eccCccCHHHHHHHHHhCCCCCEEEee
Confidence 666322222233333445556666665
No 101
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.76 E-value=8.4e-18 Score=169.19 Aligned_cols=152 Identities=19% Similarity=0.287 Sum_probs=125.1
Q ss_pred EEEcCCCcccccCCccCCCCCCCCEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEeeCCc
Q 004275 89 VILLKGFNLAGVIPEEFGNLTFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVLEDNQ 168 (764)
Q Consensus 89 ~L~L~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~ 168 (764)
.++++++++.. +|..+. +.|++|+|++|.+++..+..|..+++|++|+|++|.+++..|..|..+++|++|+|++|+
T Consensus 15 ~v~c~~~~l~~-iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~ 91 (220)
T 2v9t_B 15 IVDCRGKGLTE-IPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNK 91 (220)
T ss_dssp EEECTTSCCSS-CCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSC
T ss_pred EEEcCCCCcCc-CCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCc
Confidence 46677777664 565554 689999999999987777788999999999999999998888889999999999999999
Q ss_pred CCCCCCccCCCCCCCcEEEccCccCCCCCcccccCCCCCcEEEccCccCCCcCcccccCCCCCCEEeeeCCcCCC
Q 004275 169 LVGPLPENLGNLKSLRRILLSSNNFTGSIPESYGNLKNLTEFRIDGSNLTGRIPNFIGNWTKLDRLDLQGTSLEG 243 (764)
Q Consensus 169 l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 243 (764)
++...+..|..+++|++|+|++|++++..|..|..+++|++|+|++|++++..+..+..+++|+.|+|++|.+..
T Consensus 92 l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 92 ITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCC
Confidence 986655567888899999999999888778888888888888888888887777777788888888888887653
No 102
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.76 E-value=7.3e-18 Score=169.66 Aligned_cols=155 Identities=21% Similarity=0.277 Sum_probs=134.3
Q ss_pred EEEEcCCCcccccCCccCCCCCCCCEEEccCCcCCccCc-hhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEeeC
Q 004275 88 TVILLKGFNLAGVIPEEFGNLTFLQEVDLSRNYFNGSLP-KSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVLED 166 (764)
Q Consensus 88 ~~L~L~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~ 166 (764)
+.++++++.+.. +|..+. +.+++|+|++|.+++..| ..|..+++|++|+|++|.+++..+..|..+++|++|+|++
T Consensus 14 ~~l~~s~n~l~~-iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 14 TTVDCSNQKLNK-IPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp TEEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEeEeCCCCccc-CccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 368888888865 676654 356899999999997755 4588999999999999999988788899999999999999
Q ss_pred CcCCCCCCccCCCCCCCcEEEccCccCCCCCcccccCCCCCcEEEccCccCCCcCcccccCCCCCCEEeeeCCcCCCCC
Q 004275 167 NQLVGPLPENLGNLKSLRRILLSSNNFTGSIPESYGNLKNLTEFRIDGSNLTGRIPNFIGNWTKLDRLDLQGTSLEGPI 245 (764)
Q Consensus 167 N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 245 (764)
|++++..|..|.++++|++|+|++|++++..|..|..+++|++|++++|++++..|..+..+++|+.|+|++|.+....
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c 169 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNC 169 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSG
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCC
Confidence 9999888878999999999999999999888888999999999999999999888888999999999999999887653
No 103
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.75 E-value=4e-18 Score=179.35 Aligned_cols=146 Identities=24% Similarity=0.425 Sum_probs=88.0
Q ss_pred CCCCCCCEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEeeCCcCCCCCCccCCCCCCCcE
Q 004275 106 GNLTFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVLEDNQLVGPLPENLGNLKSLRR 185 (764)
Q Consensus 106 ~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~ 185 (764)
..+++|++|++++|.+.. +| .+..+++|++|+|++|++++..+ +..+++|++|+|++|.+++ +| .+..+++|++
T Consensus 43 ~~l~~L~~L~l~~~~i~~-~~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~ 116 (291)
T 1h6t_A 43 NELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKS 116 (291)
T ss_dssp HHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCE
T ss_pred hhcCcccEEEccCCCccc-Ch-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCE
Confidence 345666666666666653 23 36666666677776666664333 6666667777776666654 22 3666666777
Q ss_pred EEccCccCCCCCcccccCCCCCcEEEccCccCCCcCcccccCCCCCCEEeeeCCcCCCCCccchhcCCCCCEEEcCCC
Q 004275 186 ILLSSNNFTGSIPESYGNLKNLTEFRIDGSNLTGRIPNFIGNWTKLDRLDLQGTSLEGPIPSTISQLKNLTELRISDL 263 (764)
Q Consensus 186 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~n 263 (764)
|++++|++++. ..+..+++|+.|++++|.+++. ..+..+++|+.|++++|++++..| +..+++|+.|++++|
T Consensus 117 L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N 188 (291)
T 1h6t_A 117 LSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKN 188 (291)
T ss_dssp EECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSS
T ss_pred EECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCC
Confidence 77776666642 3456666666666666666643 355666666666666666664433 555555555555543
No 104
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.75 E-value=6.3e-18 Score=183.55 Aligned_cols=174 Identities=20% Similarity=0.233 Sum_probs=144.6
Q ss_pred EEEEcCCCcccccCCccCCCCCCCCEEEccCCcCCccCchhhh-cCCCCcEEecccCcCcccCCcCcCCCCCCCEEEeeC
Q 004275 88 TVILLKGFNLAGVIPEEFGNLTFLQEVDLSRNYFNGSLPKSFA-RLQNLTKLLILGNRLSGSIPLEIGDISTLEELVLED 166 (764)
Q Consensus 88 ~~L~L~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~ 166 (764)
+.++++++++.. +|..+. +.+++|+|++|++++..+..|. .+++|++|+|++|++++..|..|..+++|++|+|++
T Consensus 21 ~~l~c~~~~l~~-iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLPN-VPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCSS-CCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcCc-cCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 357888888875 666554 4589999999999987777787 999999999999999988788899999999999999
Q ss_pred CcCCCCCCccCCCCCCCcEEEccCccCCCCCcccccCCCCCcEEEccCccCCCcCcccc---cCCCCCCEEeeeCCcCCC
Q 004275 167 NQLVGPLPENLGNLKSLRRILLSSNNFTGSIPESYGNLKNLTEFRIDGSNLTGRIPNFI---GNWTKLDRLDLQGTSLEG 243 (764)
Q Consensus 167 N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~---~~l~~L~~L~L~~N~l~~ 243 (764)
|++++..+..|.++++|++|+|++|++++..|..|..+++|+.|+|++|++++..+..+ ..+++|+.|+|++|++++
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 177 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKK 177 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCC
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCc
Confidence 99997777789999999999999999998888899999999999999999986544445 568899999999999987
Q ss_pred CCccchhcCCCC--CEEEcCCCC
Q 004275 244 PIPSTISQLKNL--TELRISDLK 264 (764)
Q Consensus 244 ~~p~~l~~l~~L--~~L~L~~n~ 264 (764)
..+..+..++.+ +.|++++|.
T Consensus 178 l~~~~~~~l~~~~l~~l~l~~N~ 200 (361)
T 2xot_A 178 LPLTDLQKLPAWVKNGLYLHNNP 200 (361)
T ss_dssp CCHHHHHHSCHHHHTTEECCSSC
T ss_pred cCHHHhhhccHhhcceEEecCCC
Confidence 666677777653 666666643
No 105
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.74 E-value=1.7e-17 Score=166.95 Aligned_cols=150 Identities=17% Similarity=0.261 Sum_probs=131.6
Q ss_pred CEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEeeCCcCCCCCCccCCCCCCCcEEEccCc
Q 004275 112 QEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVLEDNQLVGPLPENLGNLKSLRRILLSSN 191 (764)
Q Consensus 112 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N 191 (764)
+.++++++.++ .+|..+. ++|+.|+|++|.+++..+..|..+++|++|+|++|++++..|..|.++++|++|+|++|
T Consensus 14 ~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 57899999987 5676554 78999999999999777778999999999999999999888999999999999999999
Q ss_pred cCCCCCcccccCCCCCcEEEccCccCCCcCcccccCCCCCCEEeeeCCcCCCCCccchhcCCCCCEEEcCCCC
Q 004275 192 NFTGSIPESYGNLKNLTEFRIDGSNLTGRIPNFIGNWTKLDRLDLQGTSLEGPIPSTISQLKNLTELRISDLK 264 (764)
Q Consensus 192 ~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~n~ 264 (764)
+++...+..|..+++|++|+|++|.+++..|..|..+++|+.|+|++|++++..+..+..+++|+.|++++|.
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 163 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNP 163 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSC
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCC
Confidence 9997666678899999999999999998888899999999999999999998777778888888888888754
No 106
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.74 E-value=1.5e-17 Score=167.27 Aligned_cols=150 Identities=16% Similarity=0.223 Sum_probs=131.3
Q ss_pred CEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCC-cCcCCCCCCCEEEeeCCcCCCCCCccCCCCCCCcEEEccC
Q 004275 112 QEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIP-LEIGDISTLEELVLEDNQLVGPLPENLGNLKSLRRILLSS 190 (764)
Q Consensus 112 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~ 190 (764)
+++++++|.++ .+|..+. ..+++|+|++|.+++..| ..|..+++|++|+|++|++++..+..|.++++|++|+|++
T Consensus 14 ~~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 14 TTVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEeEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 58999999997 4776553 457899999999997755 4578999999999999999987777899999999999999
Q ss_pred ccCCCCCcccccCCCCCcEEEccCccCCCcCcccccCCCCCCEEeeeCCcCCCCCccchhcCCCCCEEEcCCCC
Q 004275 191 NNFTGSIPESYGNLKNLTEFRIDGSNLTGRIPNFIGNWTKLDRLDLQGTSLEGPIPSTISQLKNLTELRISDLK 264 (764)
Q Consensus 191 N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~n~ 264 (764)
|++++..+..|..+++|++|++++|.+++..|..+..+++|+.|+|++|++++..|..|..+++|+.|++++|.
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 164 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANP 164 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCC
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcC
Confidence 99998888889999999999999999998888999999999999999999998888888888888888888754
No 107
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.74 E-value=1.1e-17 Score=176.07 Aligned_cols=186 Identities=22% Similarity=0.360 Sum_probs=119.1
Q ss_pred EEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEeeCCcCCCCCCccCCCCCCCcEEEccCccC
Q 004275 114 VDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVLEDNQLVGPLPENLGNLKSLRRILLSSNNF 193 (764)
Q Consensus 114 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l 193 (764)
+++..+.++...+ +..+++|++|++++|.+.. ++ .+..+++|++|+|++|++++..+ +.++++|++|++++|++
T Consensus 29 ~~l~~~~~~~~~~--~~~l~~L~~L~l~~~~i~~-~~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l 102 (291)
T 1h6t_A 29 DNLKKKSVTDAVT--QNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKV 102 (291)
T ss_dssp HHTTCSCTTSEEC--HHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCC
T ss_pred HHhcCCCcccccc--hhhcCcccEEEccCCCccc-Ch-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcC
Confidence 3444555543322 4567777777777777763 33 36677777777777777765433 67777777777777777
Q ss_pred CCCCcccccCCCCCcEEEccCccCCCcCcccccCCCCCCEEeeeCCcCCCCCccchhcCCCCCEEEcCCCCCCCCCCCCc
Q 004275 194 TGSIPESYGNLKNLTEFRIDGSNLTGRIPNFIGNWTKLDRLDLQGTSLEGPIPSTISQLKNLTELRISDLKGSSSSFPNL 273 (764)
Q Consensus 194 ~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~l 273 (764)
++ ++ .+..+++|++|++++|++++. ..+..+++|+.|++++|++++. +.+
T Consensus 103 ~~-~~-~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--------------------------~~l 152 (291)
T 1h6t_A 103 KD-LS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--------------------------TVL 152 (291)
T ss_dssp CC-GG-GGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--------------------------GGG
T ss_pred CC-Ch-hhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--------------------------hhh
Confidence 64 22 366666666666666666542 3455556666666666655532 234
Q ss_pred cCCccccccccccccccccCCccccCCCCCCEEeccCCCCCCCccccccCCCCCCEEeccCCcCcC
Q 004275 274 QDMKKMERLILRNCLITGRIPEYIEDMTDLKILDLSFNQLTGPVPGILQNLKKIDYIFLTNNSLSG 339 (764)
Q Consensus 274 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g 339 (764)
..+++|+.|++++|++++..| +..+++|+.|++++|++++ +| .+..+++|+.|++++|+++.
T Consensus 153 ~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~-l~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 153 SRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp GGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEEEEEEEEEC
T ss_pred ccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcCCC-Ch-hhccCCCCCEEECcCCcccC
Confidence 445555666666666665444 6777888888888888875 34 37788888888888888874
No 108
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=99.74 E-value=1.1e-18 Score=183.33 Aligned_cols=91 Identities=34% Similarity=0.713 Sum_probs=79.8
Q ss_pred cCccccCeeeccCCeeEEEEEEc------CCCEEEEEEcCCcChhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEE
Q 004275 659 NNFDAANKIGEGGFGPVYKGTLS------DGAVIAVKQLSSKSKQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLL 732 (764)
Q Consensus 659 ~~~~~~~~iG~G~~g~Vy~~~~~------~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 732 (764)
++|...+.||+|+||+||+|++. +++.||||+++.......++|.+|+++|++++|||||+++|+|.+.+..+|
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 92 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 92 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence 45777889999999999999863 477899999987766667889999999999999999999999999999999
Q ss_pred EEcccCCCcHHHHHhcC
Q 004275 733 VYEYLENNSLARALFGN 749 (764)
Q Consensus 733 v~Ey~~~GsL~~~L~~~ 749 (764)
|||||++|+|.++|+..
T Consensus 93 V~Ey~~~G~L~~~l~~~ 109 (299)
T 4asz_A 93 VFEYMKHGDLNKFLRAH 109 (299)
T ss_dssp EEECCTTCBHHHHHHHT
T ss_pred EEEcCCCCcHHHHHHhc
Confidence 99999999999999753
No 109
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=99.74 E-value=3.2e-18 Score=182.42 Aligned_cols=91 Identities=34% Similarity=0.671 Sum_probs=81.7
Q ss_pred cCccccCeeeccCCeeEEEEEEc------CCCEEEEEEcCCcChhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEE
Q 004275 659 NNFDAANKIGEGGFGPVYKGTLS------DGAVIAVKQLSSKSKQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLL 732 (764)
Q Consensus 659 ~~~~~~~~iG~G~~g~Vy~~~~~------~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 732 (764)
++|...+.||+|+||+||+|++. +++.||||+++.......++|.+|+++|++++|||||+++|+|.+.+..+|
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 120 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM 120 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 44667789999999999999864 478899999987766667889999999999999999999999999999999
Q ss_pred EEcccCCCcHHHHHhcC
Q 004275 733 VYEYLENNSLARALFGN 749 (764)
Q Consensus 733 v~Ey~~~GsL~~~L~~~ 749 (764)
|||||++|+|.++|+..
T Consensus 121 V~Ey~~~G~L~~~l~~~ 137 (329)
T 4aoj_A 121 VFEYMRHGDLNRFLRSH 137 (329)
T ss_dssp EEECCTTCBHHHHHHTS
T ss_pred EEEcCCCCcHHHHHHhc
Confidence 99999999999999864
No 110
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.73 E-value=2.1e-17 Score=190.71 Aligned_cols=180 Identities=20% Similarity=0.333 Sum_probs=154.3
Q ss_pred eeEEEEEcCCCcccccCCccCCCCCCCCEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEe
Q 004275 85 CHVTVILLKGFNLAGVIPEEFGNLTFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVL 164 (764)
Q Consensus 85 ~~v~~L~L~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 164 (764)
.+++.|+++++.+... + .+..|++|+.|+|++|.+++..| +..+++|+.|+|++|.+++ +| .+..+++|++|+|
T Consensus 43 ~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~L 116 (605)
T 1m9s_A 43 NSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLSL 116 (605)
T ss_dssp TTCCCCBCTTCCCCCC-T-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEEC
T ss_pred CCCCEEECcCCCCCCC-h-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEEe
Confidence 4588889999988753 3 58999999999999999997555 9999999999999999985 44 7999999999999
Q ss_pred eCCcCCCCCCccCCCCCCCcEEEccCccCCCCCcccccCCCCCcEEEccCccCCCcCcccccCCCCCCEEeeeCCcCCCC
Q 004275 165 EDNQLVGPLPENLGNLKSLRRILLSSNNFTGSIPESYGNLKNLTEFRIDGSNLTGRIPNFIGNWTKLDRLDLQGTSLEGP 244 (764)
Q Consensus 165 s~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 244 (764)
++|.+.+ + ..+..+++|+.|+|++|++++. ..+..+++|+.|+|++|.+++..| +..+++|+.|+|++|++++.
T Consensus 117 s~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l 190 (605)
T 1m9s_A 117 EHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL 190 (605)
T ss_dssp TTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC
T ss_pred cCCCCCC-C-ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCCCC
Confidence 9999986 3 4689999999999999999965 679999999999999999998766 89999999999999999864
Q ss_pred CccchhcCCCCCEEEcCCCCCCCCCCCCccCCcc
Q 004275 245 IPSTISQLKNLTELRISDLKGSSSSFPNLQDMKK 278 (764)
Q Consensus 245 ~p~~l~~l~~L~~L~L~~n~~~~~~~~~l~~l~~ 278 (764)
+.+..+++|+.|+|++|++...+...+..+..
T Consensus 191 --~~l~~l~~L~~L~L~~N~l~~~p~~~~~~l~~ 222 (605)
T 1m9s_A 191 --RALAGLKNLDVLELFSQECLNKPINHQSNLVV 222 (605)
T ss_dssp --GGGTTCTTCSEEECCSEEEECCCCCCCSSCEE
T ss_pred --hHHccCCCCCEEEccCCcCcCCcccccccEEe
Confidence 46999999999999998776554444443333
No 111
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.73 E-value=1.2e-17 Score=181.29 Aligned_cols=176 Identities=19% Similarity=0.151 Sum_probs=135.2
Q ss_pred CEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCcCcC-CCCCCCEEEeeCCcCCCCCCccCCCCCCCcEEEccC
Q 004275 112 QEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIG-DISTLEELVLEDNQLVGPLPENLGNLKSLRRILLSS 190 (764)
Q Consensus 112 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~ 190 (764)
+.+++++++++ .+|..+. +.++.|+|++|++++..+..+. .+++|++|+|++|++++..+..|.++++|++|+|++
T Consensus 21 ~~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 57899999997 4676553 4689999999999987777787 899999999999999987778899999999999999
Q ss_pred ccCCCCCcccccCCCCCcEEEccCccCCCcCcccccCCCCCCEEeeeCCcCCCCCccch---hcCCCCCEEEcCCCCCCC
Q 004275 191 NNFTGSIPESYGNLKNLTEFRIDGSNLTGRIPNFIGNWTKLDRLDLQGTSLEGPIPSTI---SQLKNLTELRISDLKGSS 267 (764)
Q Consensus 191 N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l---~~l~~L~~L~L~~n~~~~ 267 (764)
|++++..+..|..+++|++|+|++|++++..|..|..+++|+.|+|++|++++..+..+ ..+++|+.|+|+
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~------ 171 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLS------ 171 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECC------
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECC------
Confidence 99987777788899999999999999988888888999999999999999886444433 344555555555
Q ss_pred CCCCCccCCccccccccccccccccCCccccCCCC--CCEEeccCCCCC
Q 004275 268 SSFPNLQDMKKMERLILRNCLITGRIPEYIEDMTD--LKILDLSFNQLT 314 (764)
Q Consensus 268 ~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~--L~~L~Ls~N~l~ 314 (764)
+|++++..+..+..++. |+.|+|++|.+.
T Consensus 172 ------------------~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 172 ------------------SNKLKKLPLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp ------------------SSCCCCCCHHHHHHSCHHHHTTEECCSSCEE
T ss_pred ------------------CCCCCccCHHHhhhccHhhcceEEecCCCcc
Confidence 45554333334444444 356677777665
No 112
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.72 E-value=6e-17 Score=164.01 Aligned_cols=149 Identities=23% Similarity=0.256 Sum_probs=122.5
Q ss_pred CEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEeeCCcCCCCCCccCCCCCCCcEEEccCc
Q 004275 112 QEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVLEDNQLVGPLPENLGNLKSLRRILLSSN 191 (764)
Q Consensus 112 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N 191 (764)
+.++.+++.++ .+|..+. ++|++|+|++|.+++..|..|..+++|++|+|++|++....+..|..+++|++|+|++|
T Consensus 22 ~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N 98 (229)
T 3e6j_A 22 TTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTN 98 (229)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCC
Confidence 34566666665 5665443 88999999999999888888999999999999999997666666889999999999999
Q ss_pred cCCCCCcccccCCCCCcEEEccCccCCCcCcccccCCCCCCEEeeeCCcCCCCCccchhcCCCCCEEEcCCCC
Q 004275 192 NFTGSIPESYGNLKNLTEFRIDGSNLTGRIPNFIGNWTKLDRLDLQGTSLEGPIPSTISQLKNLTELRISDLK 264 (764)
Q Consensus 192 ~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~n~ 264 (764)
++++..+..|..+++|++|++++|+++ .+|..+..+++|+.|+|++|++++..+..+..+++|+.|++++|.
T Consensus 99 ~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 170 (229)
T 3e6j_A 99 QLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNP 170 (229)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSC
T ss_pred cCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCC
Confidence 998777777888999999999999988 678888888899999999998887666677777777777777754
No 113
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.72 E-value=3.9e-17 Score=161.27 Aligned_cols=150 Identities=18% Similarity=0.180 Sum_probs=74.9
Q ss_pred CCCCCCEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEeeCCcCCCCCCccCCCCCCCcEE
Q 004275 107 NLTFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVLEDNQLVGPLPENLGNLKSLRRI 186 (764)
Q Consensus 107 ~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L 186 (764)
.+++|++|++++|.++ .+| .+..+++|++|++++|.++ .+..+..+++|++|++++|++++..|..+..+++|++|
T Consensus 42 ~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L 117 (197)
T 4ezg_A 42 QMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLL 117 (197)
T ss_dssp HHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEE
T ss_pred hcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEE
Confidence 3445555555555554 333 3555555555555555432 22345555555555555555554445555555555555
Q ss_pred EccCccCCCCCcccccCCCCCcEEEccCccCCCcCcccccCCCCCCEEeeeCCcCCCCCccchhcCCCCCEEEcCCC
Q 004275 187 LLSSNNFTGSIPESYGNLKNLTEFRIDGSNLTGRIPNFIGNWTKLDRLDLQGTSLEGPIPSTISQLKNLTELRISDL 263 (764)
Q Consensus 187 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~n 263 (764)
++++|++++..|..+..+++|++|++++|.+.+.+| .+..+++|+.|++++|.+++. + .+..+++|+.|++++|
T Consensus 118 ~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~-~l~~l~~L~~L~l~~n~i~~~-~-~l~~l~~L~~L~l~~N 191 (197)
T 4ezg_A 118 DISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIM-PLKTLPELKSLNIQFDGVHDY-R-GIEDFPKLNQLYAFSQ 191 (197)
T ss_dssp ECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCG-GGGGCSSCCEEECTTBCCCCC-T-TGGGCSSCCEEEECBC
T ss_pred EecCCccCcHhHHHHhhCCCCCEEEccCCCCccccH-hhcCCCCCCEEECCCCCCcCh-H-HhccCCCCCEEEeeCc
Confidence 555555554445555555555555555554222333 345555555555555555432 2 3444455555554443
No 114
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.72 E-value=2.7e-20 Score=213.54 Aligned_cols=188 Identities=18% Similarity=0.181 Sum_probs=95.6
Q ss_pred CCCCCCCCEEEccCCcCCccCchhhhcCCCCcEEecccCc-------------CcccCCcCcCCCCCCCEEE-eeCCcCC
Q 004275 105 FGNLTFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNR-------------LSGSIPLEIGDISTLEELV-LEDNQLV 170 (764)
Q Consensus 105 l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~-------------l~~~~p~~~~~l~~L~~L~-Ls~N~l~ 170 (764)
+..+++|+.|+|++|.++ .+|..++.+++|+.|++++|. +.+.+|..++.+++|+.|+ ++.|.+
T Consensus 345 ~~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~- 422 (567)
T 1dce_A 345 SATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYL- 422 (567)
T ss_dssp CSTTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHH-
T ss_pred cccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhccc-
Confidence 356788888888888886 678888888888888887664 3344444555555555555 333322
Q ss_pred CCCCccCCCCCCCcEEEccCccCCCCCcccccCCCCCcEEEccCccCCCcCcccccCCCCCCEEeeeCCcCCCCCccchh
Q 004275 171 GPLPENLGNLKSLRRILLSSNNFTGSIPESYGNLKNLTEFRIDGSNLTGRIPNFIGNWTKLDRLDLQGTSLEGPIPSTIS 250 (764)
Q Consensus 171 ~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~ 250 (764)
..|+.+.+++|.++.. |. ..|+.|++++|.+++ +|. ++.+++|+.|+|++|.++ .+|..++
T Consensus 423 ----------~~L~~l~l~~n~i~~l-~~-----~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~ 483 (567)
T 1dce_A 423 ----------DDLRSKFLLENSVLKM-EY-----ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALA 483 (567)
T ss_dssp ----------HHHHHHHHHHHHHHHH-HH-----TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGG
T ss_pred ----------chhhhhhhhccccccc-Cc-----cCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhh
Confidence 1222233333333311 11 124555555555553 343 555555555555555555 4455555
Q ss_pred cCCCCCEEEcCCCCCCCCCCCCccCCccccccccccccccccC-CccccCCCCCCEEeccCCCCCC
Q 004275 251 QLKNLTELRISDLKGSSSSFPNLQDMKKMERLILRNCLITGRI-PEYIEDMTDLKILDLSFNQLTG 315 (764)
Q Consensus 251 ~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~g 315 (764)
.+++|+.|+|++|.+.. +|.+..+++|+.|+|++|++++.. |..+..+++|+.|+|++|++++
T Consensus 484 ~l~~L~~L~Ls~N~l~~--lp~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~ 547 (567)
T 1dce_A 484 ALRCLEVLQASDNALEN--VDGVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQ 547 (567)
T ss_dssp GCTTCCEEECCSSCCCC--CGGGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGG
T ss_pred cCCCCCEEECCCCCCCC--CcccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCC
Confidence 55555555444433221 223333333334444444444333 4444444444444444444443
No 115
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=99.71 E-value=6.1e-18 Score=178.56 Aligned_cols=90 Identities=30% Similarity=0.465 Sum_probs=77.4
Q ss_pred CccccCeeeccCCeeEEEEEEc------CCCEEEEEEcCCcC-hhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEE
Q 004275 660 NFDAANKIGEGGFGPVYKGTLS------DGAVIAVKQLSSKS-KQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLL 732 (764)
Q Consensus 660 ~~~~~~~iG~G~~g~Vy~~~~~------~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 732 (764)
.++..+.||+|+||+||+|++. +++.||||+++... ....++|.+|++++++++|||||+++|+|.+.+..+|
T Consensus 27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~l 106 (308)
T 4gt4_A 27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSM 106 (308)
T ss_dssp GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEE
Confidence 3566788999999999999862 46789999997543 3346789999999999999999999999999999999
Q ss_pred EEcccCCCcHHHHHhcC
Q 004275 733 VYEYLENNSLARALFGN 749 (764)
Q Consensus 733 v~Ey~~~GsL~~~L~~~ 749 (764)
|||||++|+|.++|+.+
T Consensus 107 V~Ey~~~G~L~~~L~~~ 123 (308)
T 4gt4_A 107 IFSYCSHGDLHEFLVMR 123 (308)
T ss_dssp EEECCSSCBHHHHHHTT
T ss_pred EEEcCCCCcHHHHHHhh
Confidence 99999999999999753
No 116
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.70 E-value=2.8e-19 Score=207.40 Aligned_cols=277 Identities=14% Similarity=0.057 Sum_probs=204.4
Q ss_pred eeEEEEEcCCCccc----ccCCccCCCCCCCCEEEccCCcCCccCchhhhcCCCCcEEecccCc----------------
Q 004275 85 CHVTVILLKGFNLA----GVIPEEFGNLTFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNR---------------- 144 (764)
Q Consensus 85 ~~v~~L~L~~~~l~----g~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~---------------- 144 (764)
..++.|+++++.+. +.++..+.++++|++|+|++|.+.+ +|..+..+++|++|+++.+.
T Consensus 192 ~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~ 270 (592)
T 3ogk_B 192 TSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPR 270 (592)
T ss_dssp CCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCT
T ss_pred CCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhccc
Confidence 35888999988886 3344455678899999999988875 66777777888877776321
Q ss_pred ----------CcccCCcCcCCCCCCCEEEeeCCcCCCCCC-ccCCCCCCCcEEEccCccCCCCCcccccCCCCCcEEEcc
Q 004275 145 ----------LSGSIPLEIGDISTLEELVLEDNQLVGPLP-ENLGNLKSLRRILLSSNNFTGSIPESYGNLKNLTEFRID 213 (764)
Q Consensus 145 ----------l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 213 (764)
..+.+|..+..+++|++|+|++|.+++... ..+..+++|++|+++++...+.++..+..+++|++|+++
T Consensus 271 ~L~~L~l~~~~~~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~L~ 350 (592)
T 3ogk_B 271 KLCRLGLSYMGPNEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIE 350 (592)
T ss_dssp TCCEEEETTCCTTTGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCCEEEEE
T ss_pred cccccCccccchhHHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEeccCccCHHHHHHHHHhCCCCCEEEee
Confidence 123466677789999999999999765433 336889999999999433333444555778999999999
Q ss_pred C-----------ccCCCc-CcccccCCCCCCEEeeeCCcCCCCCccchhc-CCCCCEEEcCC---CCCCCCC-----CCC
Q 004275 214 G-----------SNLTGR-IPNFIGNWTKLDRLDLQGTSLEGPIPSTISQ-LKNLTELRISD---LKGSSSS-----FPN 272 (764)
Q Consensus 214 ~-----------n~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~-l~~L~~L~L~~---n~~~~~~-----~~~ 272 (764)
+ |.+++. ++.....+++|++|+++.|.+++..+..+.. +++|+.|+++. ++..+.. ++.
T Consensus 351 ~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~ 430 (592)
T 3ogk_B 351 RGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRS 430 (592)
T ss_dssp CCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHH
T ss_pred cCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHH
Confidence 3 566543 2333456899999999999998877777776 99999999973 2222221 111
Q ss_pred -ccCCcccccccccccc--ccccCCcccc-CCCCCCEEeccCCCCCC-CccccccCCCCCCEEeccCCcCcCCCChhh--
Q 004275 273 -LQDMKKMERLILRNCL--ITGRIPEYIE-DMTDLKILDLSFNQLTG-PVPGILQNLKKIDYIFLTNNSLSGTLPDWI-- 345 (764)
Q Consensus 273 -l~~l~~L~~L~Ls~N~--l~~~~p~~~~-~l~~L~~L~Ls~N~l~g-~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~-- 345 (764)
+..+++|++|++++|. +++..+..+. .+++|++|++++|++++ .++..+..+++|++|++++|.+++....++
T Consensus 431 ~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~ 510 (592)
T 3ogk_B 431 LLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVT 510 (592)
T ss_dssp HHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHH
T ss_pred HHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHH
Confidence 5568999999998543 6655444443 47999999999999986 455667889999999999999876533333
Q ss_pred -hcCCCeEEeecCcCCCC
Q 004275 346 -LTSEKNLDLSYNNFTES 362 (764)
Q Consensus 346 -~~~l~~L~Ls~N~l~~~ 362 (764)
.+.++.|+|++|++++.
T Consensus 511 ~l~~L~~L~ls~n~it~~ 528 (592)
T 3ogk_B 511 KLPSLRYLWVQGYRASMT 528 (592)
T ss_dssp HCSSCCEEEEESCBCCTT
T ss_pred hcCccCeeECcCCcCCHH
Confidence 56789999999999876
No 117
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.70 E-value=5.4e-17 Score=160.30 Aligned_cols=152 Identities=17% Similarity=0.223 Sum_probs=133.0
Q ss_pred eeEEEEEcCCCcccccCCccCCCCCCCCEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEe
Q 004275 85 CHVTVILLKGFNLAGVIPEEFGNLTFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVL 164 (764)
Q Consensus 85 ~~v~~L~L~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 164 (764)
.+++.|+++++.+. .+| .+..+++|++|++++|.++ .+..+..+++|++|++++|.+++..|..++.+++|++|+|
T Consensus 44 ~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L 119 (197)
T 4ezg_A 44 NSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDI 119 (197)
T ss_dssp HTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEEC
T ss_pred CCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEe
Confidence 46899999999988 556 6899999999999999775 3457999999999999999999888999999999999999
Q ss_pred eCCcCCCCCCccCCCCCCCcEEEccCccCCCCCcccccCCCCCcEEEccCccCCCcCcccccCCCCCCEEeeeCCcCCC
Q 004275 165 EDNQLVGPLPENLGNLKSLRRILLSSNNFTGSIPESYGNLKNLTEFRIDGSNLTGRIPNFIGNWTKLDRLDLQGTSLEG 243 (764)
Q Consensus 165 s~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 243 (764)
++|++++..|..+..+++|++|++++|++.+.+| .+..+++|++|++++|.+++ ++ .+..+++|+.|++++|++.+
T Consensus 120 s~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~-~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~N~i~~ 195 (197)
T 4ezg_A 120 SHSAHDDSILTKINTLPKVNSIDLSYNGAITDIM-PLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLYAFSQTIGG 195 (197)
T ss_dssp CSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCG-GGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEEECBC----
T ss_pred cCCccCcHhHHHHhhCCCCCEEEccCCCCccccH-hhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEEeeCcccCC
Confidence 9999998888899999999999999998434566 69999999999999999986 34 78899999999999999864
No 118
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.67 E-value=1.7e-19 Score=206.77 Aligned_cols=201 Identities=17% Similarity=0.139 Sum_probs=139.7
Q ss_pred hcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEeeCCc-------------CCCCCCccCCCCCCCcEEE-ccCccCCC
Q 004275 130 ARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVLEDNQ-------------LVGPLPENLGNLKSLRRIL-LSSNNFTG 195 (764)
Q Consensus 130 ~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~-------------l~~~~p~~l~~l~~L~~L~-Ls~N~l~~ 195 (764)
..+++|+.|+|++|+++ .+|.+++++++|+.|++++|. +.+.+|..++.+++|+.|+ ++.|.+
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~-- 422 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYL-- 422 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHH--
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhccc--
Confidence 45677888888888876 677778888888888776554 3333444444444444444 333322
Q ss_pred CCcccccCCCCCcEEEccCccCCCcCcccccCCCCCCEEeeeCCcCCCCCccchhcCCCCCEEEcCCCCCCCCCCC-Ccc
Q 004275 196 SIPESYGNLKNLTEFRIDGSNLTGRIPNFIGNWTKLDRLDLQGTSLEGPIPSTISQLKNLTELRISDLKGSSSSFP-NLQ 274 (764)
Q Consensus 196 ~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~-~l~ 274 (764)
.+|..+.+.+|.++...+ ..|+.|+|++|.+++ +|. ++.+++|+.|++++|++. .+| .+.
T Consensus 423 ---------~~L~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~--~lp~~~~ 483 (567)
T 1dce_A 423 ---------DDLRSKFLLENSVLKMEY------ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR--ALPPALA 483 (567)
T ss_dssp ---------HHHHHHHHHHHHHHHHHH------TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC--CCCGGGG
T ss_pred ---------chhhhhhhhcccccccCc------cCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc--ccchhhh
Confidence 123333444455543211 258899999999986 565 888999999999987665 444 478
Q ss_pred CCccccccccccccccccCCccccCCCCCCEEeccCCCCCCCc-cccccCCCCCCEEeccCCcCcCCCChhh-----hcC
Q 004275 275 DMKKMERLILRNCLITGRIPEYIEDMTDLKILDLSFNQLTGPV-PGILQNLKKIDYIFLTNNSLSGTLPDWI-----LTS 348 (764)
Q Consensus 275 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~-p~~~~~l~~L~~L~L~~N~l~g~~p~~~-----~~~ 348 (764)
.+++|+.|+|++|.+++ +| .+..+++|+.|+|++|+|++.. |..+..+++|+.|+|++|++++..|... ++.
T Consensus 484 ~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~ 561 (567)
T 1dce_A 484 ALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPS 561 (567)
T ss_dssp GCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTT
T ss_pred cCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCcc
Confidence 88888888888888886 66 7888888888888888888776 8888888888888888888887665421 455
Q ss_pred CCeEEe
Q 004275 349 EKNLDL 354 (764)
Q Consensus 349 l~~L~L 354 (764)
++.||+
T Consensus 562 L~~L~l 567 (567)
T 1dce_A 562 VSSILT 567 (567)
T ss_dssp CSEEEC
T ss_pred cCccCC
Confidence 666653
No 119
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.67 E-value=6.1e-17 Score=167.57 Aligned_cols=144 Identities=18% Similarity=0.252 Sum_probs=85.1
Q ss_pred CCCCCEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEeeCCcCCCCCCccCCCCCCCcEEE
Q 004275 108 LTFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVLEDNQLVGPLPENLGNLKSLRRIL 187 (764)
Q Consensus 108 L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 187 (764)
+.+++.+++++|.++. ++ .+..+++|++|++++|.++ .+| .+..+++|++|+|++|++++..+ +.++++|++|+
T Consensus 18 l~~l~~l~l~~~~i~~-~~-~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~ 91 (263)
T 1xeu_A 18 LANAVKQNLGKQSVTD-LV-SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELS 91 (263)
T ss_dssp HHHHHHHHHTCSCTTS-EE-CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEE
T ss_pred HHHHHHHHhcCCCccc-cc-chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEE
Confidence 4445556666666653 23 4566666777777776665 344 56666677777777776664333 66667777777
Q ss_pred ccCccCCCCCcccccCCCCCcEEEccCccCCCcCcccccCCCCCCEEeeeCCcCCCCCccchhcCCCCCEEEcCCCC
Q 004275 188 LSSNNFTGSIPESYGNLKNLTEFRIDGSNLTGRIPNFIGNWTKLDRLDLQGTSLEGPIPSTISQLKNLTELRISDLK 264 (764)
Q Consensus 188 Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~n~ 264 (764)
|++|++++ +|. +.. ++|++|++++|++++. +.+..+++|+.|++++|++++. + .+..+++|+.|++++|.
T Consensus 92 L~~N~l~~-l~~-~~~-~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~ 161 (263)
T 1xeu_A 92 VNRNRLKN-LNG-IPS-ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNE 161 (263)
T ss_dssp CCSSCCSC-CTT-CCC-SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSC
T ss_pred CCCCccCC-cCc-ccc-CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCc
Confidence 77776664 332 222 6666666666666642 2466666666666666666643 2 35555555555555533
No 120
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=99.67 E-value=4.2e-17 Score=173.79 Aligned_cols=106 Identities=27% Similarity=0.472 Sum_probs=93.5
Q ss_pred cCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcChhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEEccc
Q 004275 659 NNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKSKQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVYEYL 737 (764)
Q Consensus 659 ~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~ 737 (764)
+.|+..+.||+|+||+||+|+. .+|+.||||++........+.+.+|+++|++++|||||++++++.+.+..|||||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 153 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 153 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence 4588888999999999999995 579999999997654445567899999999999999999999999999999999999
Q ss_pred CCCcHHHHHhcCCC-------------CCCCHHHHccccC
Q 004275 738 ENNSLARALFGNAI-------------TKITYTFSLHLWN 764 (764)
Q Consensus 738 ~~GsL~~~L~~~~~-------------~~l~~~~~~~i~h 764 (764)
++|+|.+++..... .+|+|.|..+|+|
T Consensus 154 ~gg~L~~~l~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiH 193 (346)
T 4fih_A 154 EGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIH 193 (346)
T ss_dssp TTEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred CCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 99999999976432 3689999999998
No 121
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=99.67 E-value=1e-16 Score=171.18 Aligned_cols=106 Identities=21% Similarity=0.351 Sum_probs=86.7
Q ss_pred cCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCc--ChhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEEc
Q 004275 659 NNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSK--SKQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVYE 735 (764)
Q Consensus 659 ~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E 735 (764)
++|...+.||+|+||+||+|+. .+|+.||||++... .....+.|.+|+++|++++|||||++++++.+.+..|||||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE 103 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD 103 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence 5788999999999999999994 67999999999653 33345789999999999999999999999999999999999
Q ss_pred ccCCCcHHHHHhcCCC----------------CCCCHHHHccccC
Q 004275 736 YLENNSLARALFGNAI----------------TKITYTFSLHLWN 764 (764)
Q Consensus 736 y~~~GsL~~~L~~~~~----------------~~l~~~~~~~i~h 764 (764)
||++|+|.++|..+.. .+|.|.|+.+|+|
T Consensus 104 y~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiH 148 (350)
T 4b9d_A 104 YCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILH 148 (350)
T ss_dssp CCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEE
T ss_pred CCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeee
Confidence 9999999999975421 2578899999988
No 122
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=99.66 E-value=9e-17 Score=175.60 Aligned_cols=107 Identities=27% Similarity=0.467 Sum_probs=94.8
Q ss_pred hcCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcChhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEEcc
Q 004275 658 TNNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKSKQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVYEY 736 (764)
Q Consensus 658 ~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 736 (764)
.+.|+..+.||+|+||.||+|+. .+|+.||||++........+.+.+|+++|++++|||||++++++.+.+..||||||
T Consensus 150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy 229 (423)
T 4fie_A 150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 229 (423)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeC
Confidence 35688899999999999999995 57999999999765555556799999999999999999999999999999999999
Q ss_pred cCCCcHHHHHhcCCC-------------CCCCHHHHccccC
Q 004275 737 LENNSLARALFGNAI-------------TKITYTFSLHLWN 764 (764)
Q Consensus 737 ~~~GsL~~~L~~~~~-------------~~l~~~~~~~i~h 764 (764)
|++|+|.+++..... .+|.|.|..+|+|
T Consensus 230 ~~gG~L~~~i~~~~l~e~~~~~~~~qil~aL~ylH~~~IiH 270 (423)
T 4fie_A 230 LEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIH 270 (423)
T ss_dssp CTTEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred CCCCcHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 999999999975432 4689999999999
No 123
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.65 E-value=2.6e-17 Score=194.52 Aligned_cols=190 Identities=23% Similarity=0.295 Sum_probs=128.7
Q ss_pred cCCccCCCCCCCCEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEeeCCcCCCCCCccCCC
Q 004275 100 VIPEEFGNLTFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVLEDNQLVGPLPENLGN 179 (764)
Q Consensus 100 ~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~ 179 (764)
..+..+..++.|+.|+|++|.+. .+|..+..+++|++|+|++|.++ .+|..|++|++|++|+|++|.|+ .+|..|++
T Consensus 215 ~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~ 291 (727)
T 4b8c_D 215 MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGS 291 (727)
T ss_dssp -------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGG
T ss_pred cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcC
Confidence 44777899999999999999998 78888889999999999999999 89999999999999999999999 78999999
Q ss_pred CCCCcEEEccCccCCCCCcccccCCCCCcEEEccCccCCCcCcccccCCCC-CCEEeeeCCcCCCCCccchhcCCCCCEE
Q 004275 180 LKSLRRILLSSNNFTGSIPESYGNLKNLTEFRIDGSNLTGRIPNFIGNWTK-LDRLDLQGTSLEGPIPSTISQLKNLTEL 258 (764)
Q Consensus 180 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~-L~~L~L~~N~l~~~~p~~l~~l~~L~~L 258 (764)
|++|++|+|++|.++ .+|..|+.+++|+.|+|++|.+++.+|..+..+.. +..|+|++|.+++.+|.. |..|
T Consensus 292 l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~------l~~l 364 (727)
T 4b8c_D 292 CFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE------RRFI 364 (727)
T ss_dssp GTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC----------
T ss_pred CCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccc------ccee
Confidence 999999999999997 78888999999999999999999999988765432 234789999999988874 4455
Q ss_pred EcCCCCCCCCCCCCccCCccccccccccccccccCCccccCCCCCCEEeccCCCCCC
Q 004275 259 RISDLKGSSSSFPNLQDMKKMERLILRNCLITGRIPEYIEDMTDLKILDLSFNQLTG 315 (764)
Q Consensus 259 ~L~~n~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g 315 (764)
+++.|.... ...+.+.+..+..+..+..+....+++|.+.+
T Consensus 365 ~l~~n~~~~----------------~~~~~l~~~~~~~~~~l~~~~~~~ls~Nil~~ 405 (727)
T 4b8c_D 365 EINTDGEPQ----------------REYDSLQQSTEHLATDLAKRTFTVLSYNTLCQ 405 (727)
T ss_dssp -----------------------------------------------------CCCG
T ss_pred Eeecccccc----------------cccCCccccccchhhcccccceeeeecccccc
Confidence 555531100 11123333344445566666777777777653
No 124
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.65 E-value=7.5e-17 Score=166.93 Aligned_cols=171 Identities=23% Similarity=0.339 Sum_probs=119.4
Q ss_pred cCCCCcEEecccCcCcccCCcCcCCCCCCCEEEeeCCcCCCCCCccCCCCCCCcEEEccCccCCCCCcccccCCCCCcEE
Q 004275 131 RLQNLTKLLILGNRLSGSIPLEIGDISTLEELVLEDNQLVGPLPENLGNLKSLRRILLSSNNFTGSIPESYGNLKNLTEF 210 (764)
Q Consensus 131 ~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 210 (764)
.+.+++.+++++|.+++. + .+..+++|++|++++|.++ .+| .+..+++|++|+|++|++++..+ +..+++|++|
T Consensus 17 ~l~~l~~l~l~~~~i~~~-~-~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L 90 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTDL-V-SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHHTCSCTTSE-E-CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEE
T ss_pred HHHHHHHHHhcCCCcccc-c-chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEE
Confidence 466778888888888743 3 5778888888888888887 355 67788888888888888875433 7788888888
Q ss_pred EccCccCCCcCcccccCCCCCCEEeeeCCcCCCCCccchhcCCCCCEEEcCCCCCCCCCCCCccCCcccccccccccccc
Q 004275 211 RIDGSNLTGRIPNFIGNWTKLDRLDLQGTSLEGPIPSTISQLKNLTELRISDLKGSSSSFPNLQDMKKMERLILRNCLIT 290 (764)
Q Consensus 211 ~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~N~l~ 290 (764)
++++|++++ +|.. .. ++|+.|++++|++++. + .+..+++|+. |++++|+++
T Consensus 91 ~L~~N~l~~-l~~~-~~-~~L~~L~L~~N~l~~~-~-~l~~l~~L~~------------------------L~Ls~N~i~ 141 (263)
T 1xeu_A 91 SVNRNRLKN-LNGI-PS-ACLSRLFLDNNELRDT-D-SLIHLKNLEI------------------------LSIRNNKLK 141 (263)
T ss_dssp ECCSSCCSC-CTTC-CC-SSCCEEECCSSCCSBS-G-GGTTCTTCCE------------------------EECTTSCCC
T ss_pred ECCCCccCC-cCcc-cc-CcccEEEccCCccCCC-h-hhcCcccccE------------------------EECCCCcCC
Confidence 888888775 3332 22 6777777777777642 2 3445555554 555555555
Q ss_pred ccCCccccCCCCCCEEeccCCCCCCCccccccCCCCCCEEeccCCcCcCC
Q 004275 291 GRIPEYIEDMTDLKILDLSFNQLTGPVPGILQNLKKIDYIFLTNNSLSGT 340 (764)
Q Consensus 291 ~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~ 340 (764)
+. + .+..+++|++|++++|++++. ..+..+++|+.|++++|++++.
T Consensus 142 ~~-~-~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 142 SI-V-MLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp BC-G-GGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred CC-h-HHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcccCC
Confidence 33 2 466677777777777777755 5577777888888888887754
No 125
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=99.65 E-value=1.7e-16 Score=166.88 Aligned_cols=104 Identities=25% Similarity=0.442 Sum_probs=86.4
Q ss_pred hcCccccCeeeccCCeeEEEEEEcCCCEEEEEEcCCc--ChhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEEc
Q 004275 658 TNNFDAANKIGEGGFGPVYKGTLSDGAVIAVKQLSSK--SKQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVYE 735 (764)
Q Consensus 658 ~~~~~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E 735 (764)
.+++...+.||+|+||+||+|++.+ .||||+++.. .....++|.+|++++++++|||||+++|+|.+ +..+||||
T Consensus 35 ~~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmE 111 (307)
T 3omv_A 35 ASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQ 111 (307)
T ss_dssp TTSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred HHHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEE
Confidence 3557778899999999999998743 6999999643 33445789999999999999999999999864 66899999
Q ss_pred ccCCCcHHHHHhcCCC---------------CCCCHHHHccccC
Q 004275 736 YLENNSLARALFGNAI---------------TKITYTFSLHLWN 764 (764)
Q Consensus 736 y~~~GsL~~~L~~~~~---------------~~l~~~~~~~i~h 764 (764)
||++|+|.++|+.... .++.|.|..+|+|
T Consensus 112 y~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~~IiH 155 (307)
T 3omv_A 112 WCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIH 155 (307)
T ss_dssp CCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCBC
T ss_pred cCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccC
Confidence 9999999999986532 2577888888887
No 126
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.65 E-value=6.2e-16 Score=151.98 Aligned_cols=131 Identities=24% Similarity=0.328 Sum_probs=98.9
Q ss_pred EEEEcCCCcccccCCccCCCCCCCCEEEccCCcCCccCch-hhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEeeC
Q 004275 88 TVILLKGFNLAGVIPEEFGNLTFLQEVDLSRNYFNGSLPK-SFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVLED 166 (764)
Q Consensus 88 ~~L~L~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~ 166 (764)
+.++++++++. .+|..+.. +|++|+|++|.+++..+. .|..+++|++|+|++|.+++..|..|..+++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 56778888774 56665543 788888888888765554 478888888888888888877788888888888888888
Q ss_pred CcCCCCCCccCCCCCCCcEEEccCccCCCCCcccccCCCCCcEEEccCccCCCcC
Q 004275 167 NQLVGPLPENLGNLKSLRRILLSSNNFTGSIPESYGNLKNLTEFRIDGSNLTGRI 221 (764)
Q Consensus 167 N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~ 221 (764)
|++++..|..|.++++|++|+|++|++++..|..+..+++|++|++++|.+++..
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c 142 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNC 142 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSG
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcC
Confidence 8888777777777788888888888777777777777777777777777666543
No 127
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.64 E-value=7.9e-16 Score=151.23 Aligned_cols=132 Identities=19% Similarity=0.295 Sum_probs=106.2
Q ss_pred CEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCc-CcCCCCCCCEEEeeCCcCCCCCCccCCCCCCCcEEEccC
Q 004275 112 QEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPL-EIGDISTLEELVLEDNQLVGPLPENLGNLKSLRRILLSS 190 (764)
Q Consensus 112 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~ 190 (764)
+++++++|.++ .+|..+.. +|++|+|++|.+++..+. .|+.+++|++|+|++|++++..|..|.++++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 68888888885 56765543 888888888888866554 378888888888888888887788888888888888888
Q ss_pred ccCCCCCcccccCCCCCcEEEccCccCCCcCcccccCCCCCCEEeeeCCcCCCCCc
Q 004275 191 NNFTGSIPESYGNLKNLTEFRIDGSNLTGRIPNFIGNWTKLDRLDLQGTSLEGPIP 246 (764)
Q Consensus 191 N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 246 (764)
|++++..+..|..+++|++|++++|++++..|..+..+++|++|+|++|.+.+..+
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 88887777778888888888888888888778888888888888888888776543
No 128
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.64 E-value=6e-16 Score=148.48 Aligned_cols=133 Identities=20% Similarity=0.202 Sum_probs=96.0
Q ss_pred CCCCCEEEccCCcCC-ccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEeeCCcCCCCCCccCCCCCCCcEE
Q 004275 108 LTFLQEVDLSRNYFN-GSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVLEDNQLVGPLPENLGNLKSLRRI 186 (764)
Q Consensus 108 L~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L 186 (764)
.++|++|+|++|.++ +.+|..+..+++|++|++++|.+++. ..+..+++|++|+|++|.+++.+|..+.++++|++|
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 366777888887776 56777777777788888887777754 667777778888888887776666666667777777
Q ss_pred EccCccCCCCC-cccccCCCCCcEEEccCccCCCcCc---ccccCCCCCCEEeeeCCcCC
Q 004275 187 LLSSNNFTGSI-PESYGNLKNLTEFRIDGSNLTGRIP---NFIGNWTKLDRLDLQGTSLE 242 (764)
Q Consensus 187 ~Ls~N~l~~~~-p~~~~~l~~L~~L~L~~n~l~~~~p---~~~~~l~~L~~L~L~~N~l~ 242 (764)
+|++|++++.. +..+..+++|++|++++|.+++..+ ..+..+++|++|++++|.+.
T Consensus 101 ~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 101 NLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp ECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred eccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 77777776532 2567777777777777777775544 36677777777777777765
No 129
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=99.64 E-value=1e-16 Score=168.32 Aligned_cols=106 Identities=21% Similarity=0.297 Sum_probs=92.8
Q ss_pred cCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcC---hhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEE
Q 004275 659 NNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKS---KQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVY 734 (764)
Q Consensus 659 ~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 734 (764)
++|+..+.||+|+||+||+|+. .+|+.||||++.+.. ....+.+.+|+++|++++|||||++++++.+.+..|+||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 4588999999999999999994 679999999996532 234567999999999999999999999999999999999
Q ss_pred cccCCCcHHHHHhcCCC--------------CCCCHHHHccccC
Q 004275 735 EYLENNSLARALFGNAI--------------TKITYTFSLHLWN 764 (764)
Q Consensus 735 Ey~~~GsL~~~L~~~~~--------------~~l~~~~~~~i~h 764 (764)
|||++|+|.+++..... .+|.|.|..+|+|
T Consensus 112 Ey~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiH 155 (311)
T 4aw0_A 112 SYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIH 155 (311)
T ss_dssp CCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred ecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCcc
Confidence 99999999999975421 3689999999998
No 130
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=99.61 E-value=6.3e-16 Score=161.31 Aligned_cols=103 Identities=24% Similarity=0.390 Sum_probs=86.1
Q ss_pred cccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCc--ChhcHHHHHHHHHHHHhCCCCCccceEEEEEE----CCEEEEEE
Q 004275 662 DAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSK--SKQGNREFVNEIGMISALQHQNLVKLYGCCIE----GNQLLLVY 734 (764)
Q Consensus 662 ~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~----~~~~~lv~ 734 (764)
+..+.||+|+||+||+|.. .++..||||++... .....+.|.+|++++++++|||||++++++.+ .+..||||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 5567899999999999995 56889999999643 33345679999999999999999999999875 24579999
Q ss_pred cccCCCcHHHHHhcCCC--------------CCCCHHHHcc--ccC
Q 004275 735 EYLENNSLARALFGNAI--------------TKITYTFSLH--LWN 764 (764)
Q Consensus 735 Ey~~~GsL~~~L~~~~~--------------~~l~~~~~~~--i~h 764 (764)
|||++|+|.++++.... .+|.|.|..+ |+|
T Consensus 109 Ey~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiH 154 (290)
T 3fpq_A 109 ELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIH 154 (290)
T ss_dssp ECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCC
T ss_pred eCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEe
Confidence 99999999999975421 3688999888 988
No 131
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.61 E-value=3.5e-17 Score=189.77 Aligned_cols=182 Identities=15% Similarity=0.108 Sum_probs=109.0
Q ss_pred CCCCCcEEEccCccCCCCC-cccccCCCCCcEEEccCccCCC-cCcccccCCCCCCEEeeeC---------CcCCCCCcc
Q 004275 179 NLKSLRRILLSSNNFTGSI-PESYGNLKNLTEFRIDGSNLTG-RIPNFIGNWTKLDRLDLQG---------TSLEGPIPS 247 (764)
Q Consensus 179 ~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~L~~n~l~~-~~p~~~~~l~~L~~L~L~~---------N~l~~~~p~ 247 (764)
.+++|++|+|++|.+++.. +..+..+++|++|++++| ++. .++.....+++|++|++++ +.+++....
T Consensus 287 ~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~ 365 (594)
T 2p1m_B 287 VCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLV 365 (594)
T ss_dssp HHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHH
T ss_pred hhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHH
Confidence 5688999999999876432 223567888999998887 332 2223333577888888843 344432222
Q ss_pred chh-cCCCCCEEEcCCCCCCCCCCCCc-cCCccccccccc--c----cccccc-----CCccccCCCCCCEEeccCCCCC
Q 004275 248 TIS-QLKNLTELRISDLKGSSSSFPNL-QDMKKMERLILR--N----CLITGR-----IPEYIEDMTDLKILDLSFNQLT 314 (764)
Q Consensus 248 ~l~-~l~~L~~L~L~~n~~~~~~~~~l-~~l~~L~~L~Ls--~----N~l~~~-----~p~~~~~l~~L~~L~Ls~N~l~ 314 (764)
.+. .+++|+.|.+..++.....+..+ ..+++|+.|+++ + +.++.. ++..+..+++|+.|++++ .++
T Consensus 366 ~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~ 444 (594)
T 2p1m_B 366 SVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLT 444 (594)
T ss_dssp HHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCC
T ss_pred HHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-ccc
Confidence 232 37778888666544332222222 246777778777 3 444421 112245567788888866 565
Q ss_pred CCccccccC-CCCCCEEeccCCcCcCCCChhh---hcCCCeEEeecCcCCCC
Q 004275 315 GPVPGILQN-LKKIDYIFLTNNSLSGTLPDWI---LTSEKNLDLSYNNFTES 362 (764)
Q Consensus 315 g~~p~~~~~-l~~L~~L~L~~N~l~g~~p~~~---~~~l~~L~Ls~N~l~~~ 362 (764)
+..+..+.. +++|+.|++++|.+++..+..+ .+.++.|+|++|.+++.
T Consensus 445 ~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~ 496 (594)
T 2p1m_B 445 DKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDK 496 (594)
T ss_dssp HHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHH
T ss_pred HHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHH
Confidence 544444444 6777888888777765444433 45677788888877543
No 132
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=99.60 E-value=8.6e-16 Score=161.56 Aligned_cols=106 Identities=20% Similarity=0.421 Sum_probs=87.6
Q ss_pred cCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcC-hhcHHHHHHHHHHHHhCCCCCccceEEEEEECC--------
Q 004275 659 NNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKS-KQGNREFVNEIGMISALQHQNLVKLYGCCIEGN-------- 728 (764)
Q Consensus 659 ~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~-------- 728 (764)
++|+..+.||+|+||+||+|+. .+|+.||||++.... ....+.|.+|+++|++++|||||++++++.+.+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 3588899999999999999995 578999999996533 334567999999999999999999999987644
Q ss_pred ----EEEEEEcccCCCcHHHHHhcCCC-----------------CCCCHHHHccccC
Q 004275 729 ----QLLLVYEYLENNSLARALFGNAI-----------------TKITYTFSLHLWN 764 (764)
Q Consensus 729 ----~~~lv~Ey~~~GsL~~~L~~~~~-----------------~~l~~~~~~~i~h 764 (764)
..|+|||||++|+|.+++..+.. .+++|.|..+|+|
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiH 141 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMH 141 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCcCcc
Confidence 36899999999999999976431 2588999999998
No 133
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.60 E-value=1.4e-15 Score=142.86 Aligned_cols=127 Identities=21% Similarity=0.255 Sum_probs=75.0
Q ss_pred CCCcEEecccCcCc-ccCCcCcCCCCCCCEEEeeCCcCCCCCCccCCCCCCCcEEEccCccCCCCCcccccCCCCCcEEE
Q 004275 133 QNLTKLLILGNRLS-GSIPLEIGDISTLEELVLEDNQLVGPLPENLGNLKSLRRILLSSNNFTGSIPESYGNLKNLTEFR 211 (764)
Q Consensus 133 ~~L~~L~Ls~n~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 211 (764)
++|++|++++|.++ +.+|..+..+++|++|++++|.+++. ..+.++++|++|++++|.+++.+|..+..+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 44555555555554 45555555555555555555555543 4455566666666666666655555555566666666
Q ss_pred ccCccCCCc-CcccccCCCCCCEEeeeCCcCCCCCc---cchhcCCCCCEEEcC
Q 004275 212 IDGSNLTGR-IPNFIGNWTKLDRLDLQGTSLEGPIP---STISQLKNLTELRIS 261 (764)
Q Consensus 212 L~~n~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p---~~l~~l~~L~~L~L~ 261 (764)
+++|.+++. .+..+..+++|++|++++|.+++..+ ..+..+++|+.|+++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 666666542 23556666666667776666665544 456666666666654
No 134
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.60 E-value=7e-16 Score=144.85 Aligned_cols=127 Identities=22% Similarity=0.233 Sum_probs=81.5
Q ss_pred CCCCEEEccCCcCC-ccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEeeCCcCCCCCCccCCCCCCCcEEE
Q 004275 109 TFLQEVDLSRNYFN-GSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVLEDNQLVGPLPENLGNLKSLRRIL 187 (764)
Q Consensus 109 ~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 187 (764)
++|++|++++|.++ +.+|..+..+++|++|++++|.+++. ..++.+++|++|+|++|.+++.+|..+..+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 45666666666665 55666666666666666666666544 5566666666666666666655666565666677777
Q ss_pred ccCccCCCC-CcccccCCCCCcEEEccCccCCCcCc---ccccCCCCCCEEeee
Q 004275 188 LSSNNFTGS-IPESYGNLKNLTEFRIDGSNLTGRIP---NFIGNWTKLDRLDLQ 237 (764)
Q Consensus 188 Ls~N~l~~~-~p~~~~~l~~L~~L~L~~n~l~~~~p---~~~~~l~~L~~L~L~ 237 (764)
+++|++++. .+..+..+++|++|++++|.+++..+ ..+..+++|+.|+++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 777766652 23566677777777777777765544 456667777777665
No 135
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.59 E-value=3.5e-15 Score=143.09 Aligned_cols=132 Identities=24% Similarity=0.251 Sum_probs=109.7
Q ss_pred cCCCCcEEecccCcCc-ccCCcCcCCCCCCCEEEeeCCcCCCCCCccCCCCCCCcEEEccCccCCCCCcccccCCCCCcE
Q 004275 131 RLQNLTKLLILGNRLS-GSIPLEIGDISTLEELVLEDNQLVGPLPENLGNLKSLRRILLSSNNFTGSIPESYGNLKNLTE 209 (764)
Q Consensus 131 ~l~~L~~L~Ls~n~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 209 (764)
..++|++|++++|.++ +.+|..+..+++|++|+|++|.+++. ..+..+++|++|+|++|++++.+|..+..+++|++
T Consensus 22 ~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 99 (168)
T 2ell_A 22 TPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTH 99 (168)
T ss_dssp CTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCE
T ss_pred CcccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCE
Confidence 3478999999999998 78888889999999999999998865 67888999999999999998878888888999999
Q ss_pred EEccCccCCCcC-cccccCCCCCCEEeeeCCcCCCCCc---cchhcCCCCCEEEcCCCC
Q 004275 210 FRIDGSNLTGRI-PNFIGNWTKLDRLDLQGTSLEGPIP---STISQLKNLTELRISDLK 264 (764)
Q Consensus 210 L~L~~n~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~p---~~l~~l~~L~~L~L~~n~ 264 (764)
|++++|.+++.. +..+..+++|+.|++++|.+++..+ ..+..+++|+.|++++|.
T Consensus 100 L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~ 158 (168)
T 2ell_A 100 LNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDRE 158 (168)
T ss_dssp EECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETT
T ss_pred EeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCC
Confidence 999999988642 2678888999999999998886655 467777777777776644
No 136
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=99.59 E-value=5.3e-16 Score=166.68 Aligned_cols=100 Identities=21% Similarity=0.413 Sum_probs=82.9
Q ss_pred cHHHHHHhhcCccccCeeeccCCeeEEEEEEcC------CCEEEEEEcCCcC-hhcHHHHHHHHHHHHhCCC-CCccceE
Q 004275 650 TLRQIKAATNNFDAANKIGEGGFGPVYKGTLSD------GAVIAVKQLSSKS-KQGNREFVNEIGMISALQH-QNLVKLY 721 (764)
Q Consensus 650 ~~~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~------g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H-~niv~l~ 721 (764)
...+++...++|+..+.||+|+||+||+|+... ++.||||++.... ....++|.+|+++|.+++| ||||+++
T Consensus 55 ~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~ 134 (353)
T 4ase_A 55 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL 134 (353)
T ss_dssp CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred CCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEE
Confidence 334566667889999999999999999998532 3579999997643 3345789999999999975 8999999
Q ss_pred EEEEEC-CEEEEEEcccCCCcHHHHHhcC
Q 004275 722 GCCIEG-NQLLLVYEYLENNSLARALFGN 749 (764)
Q Consensus 722 g~~~~~-~~~~lv~Ey~~~GsL~~~L~~~ 749 (764)
|+|.+. +..+||||||++|+|.++|+..
T Consensus 135 g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~ 163 (353)
T 4ase_A 135 GACTKPGGPLMVIVEFCKFGNLSTYLRSK 163 (353)
T ss_dssp EEECCTTSCCEEEEECCTTEEHHHHHHHT
T ss_pred EEEEecCCEEEEEEEcCCCCCHHHHHHhc
Confidence 999765 5689999999999999999753
No 137
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=99.59 E-value=1.3e-15 Score=157.60 Aligned_cols=105 Identities=23% Similarity=0.433 Sum_probs=87.0
Q ss_pred cCccccCeeeccCCeeEEEEE-EcCCCEEEEEEcCCcC---hhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEE
Q 004275 659 NNFDAANKIGEGGFGPVYKGT-LSDGAVIAVKQLSSKS---KQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVY 734 (764)
Q Consensus 659 ~~~~~~~~iG~G~~g~Vy~~~-~~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 734 (764)
++|+..+.||+|+||+||+|+ ..+|+.||||++.+.. ....+.+.+|++++++++|||||++++++.+.+..|+||
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 92 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 579999999999999999998 4679999999996532 223567999999999999999999999999999999999
Q ss_pred cccCCCcHHHHHhcCCC--------------CCCCHHHHccccC
Q 004275 735 EYLENNSLARALFGNAI--------------TKITYTFSLHLWN 764 (764)
Q Consensus 735 Ey~~~GsL~~~L~~~~~--------------~~l~~~~~~~i~h 764 (764)
||| +|+|.+++..+.. .++.|.|+.+|+|
T Consensus 93 Ey~-~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiH 135 (275)
T 3hyh_A 93 EYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVH 135 (275)
T ss_dssp ECC-CEEHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred eCC-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 999 6899999976532 3589999999998
No 138
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=99.59 E-value=5.7e-16 Score=164.55 Aligned_cols=101 Identities=24% Similarity=0.330 Sum_probs=87.8
Q ss_pred cCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcChhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEEccc
Q 004275 659 NNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKSKQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVYEYL 737 (764)
Q Consensus 659 ~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~ 737 (764)
+.|...+.||+|+||.||+|+. .+|+.||||+++.... +.+|++++++++|||||++++++.+.+..|||||||
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 132 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELL 132 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEecc
Confidence 4577788999999999999995 5799999999965322 247999999999999999999999999999999999
Q ss_pred CCCcHHHHHhcCCC--------------CCCCHHHHccccC
Q 004275 738 ENNSLARALFGNAI--------------TKITYTFSLHLWN 764 (764)
Q Consensus 738 ~~GsL~~~L~~~~~--------------~~l~~~~~~~i~h 764 (764)
++|+|.++|+.... .+|+|.|..+|+|
T Consensus 133 ~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiH 173 (336)
T 4g3f_A 133 EGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILH 173 (336)
T ss_dssp TTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEEC
T ss_pred CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcee
Confidence 99999999975431 3689999999998
No 139
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.58 E-value=2.6e-17 Score=190.83 Aligned_cols=178 Identities=16% Similarity=0.124 Sum_probs=103.8
Q ss_pred eEEEEEcCCCcccccCCccCC-CCCCCCEEEccCC-cCCcc-CchhhhcCCCCcEEecccCcCcccCCcCc----CCCCC
Q 004275 86 HVTVILLKGFNLAGVIPEEFG-NLTFLQEVDLSRN-YFNGS-LPKSFARLQNLTKLLILGNRLSGSIPLEI----GDIST 158 (764)
Q Consensus 86 ~v~~L~L~~~~l~g~~p~~l~-~L~~L~~L~Ls~N-~l~~~-~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~----~~l~~ 158 (764)
+++.|+|+++.+.+..+..+. .+++|++|+|++| .++.. ++..+.++++|++|+|++|.+++..+..+ ..+++
T Consensus 106 ~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~ 185 (594)
T 2p1m_B 106 WLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTS 185 (594)
T ss_dssp TCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCC
T ss_pred CCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCc
Confidence 578888888887766555554 5788888888888 44432 44555578888888888888765444333 36678
Q ss_pred CCEEEeeCCc--CCCC-CCccCCCCCCCcEEEccCccCCCCCcccccCCCCCcEEEccCcc-------------------
Q 004275 159 LEELVLEDNQ--LVGP-LPENLGNLKSLRRILLSSNNFTGSIPESYGNLKNLTEFRIDGSN------------------- 216 (764)
Q Consensus 159 L~~L~Ls~N~--l~~~-~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~------------------- 216 (764)
|++|+|++|. +... ++..+.++++|++|++++|...+.++..+..+++|++|++..+.
T Consensus 186 L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~~l~~~~ 265 (594)
T 2p1m_B 186 LVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEKLATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVALSGCK 265 (594)
T ss_dssp CCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHHHHHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHHHHHTCT
T ss_pred CcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHHHHHHHHhcCCcceEcccccccCccchhhHHHHHHHHhcCC
Confidence 8888888876 2110 11112346788888888772211244444455555555433221
Q ss_pred -------CC----CcCcccccCCCCCCEEeeeCCcCCCCCc-cchhcCCCCCEEEcCCC
Q 004275 217 -------LT----GRIPNFIGNWTKLDRLDLQGTSLEGPIP-STISQLKNLTELRISDL 263 (764)
Q Consensus 217 -------l~----~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~L~~n 263 (764)
+. +.++..+..+++|++|++++|.+++... ..+..+++|+.|+++++
T Consensus 266 ~L~~Ls~~~~~~~~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~ 324 (594)
T 2p1m_B 266 ELRCLSGFWDAVPAYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY 324 (594)
T ss_dssp TCCEEECCBTCCGGGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG
T ss_pred CcccccCCcccchhhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc
Confidence 10 1122223345666666666666543221 22345566666666653
No 140
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.58 E-value=1.1e-14 Score=143.10 Aligned_cols=127 Identities=26% Similarity=0.360 Sum_probs=99.4
Q ss_pred EEEEcCCCcccccCCccCCCCCCCCEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEeeCC
Q 004275 88 TVILLKGFNLAGVIPEEFGNLTFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVLEDN 167 (764)
Q Consensus 88 ~~L~L~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N 167 (764)
+.++++++++. .+|..+. ++|++|+|++|.++ .+|..|..+++|++|+|++|.+++..+..|..+++|++|+|++|
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 35677877776 4565543 57889999999887 67788888888888888888888777777888888888888888
Q ss_pred cCCCCCCccCCCCCCCcEEEccCccCCCCCcccccCCCCCcEEEccCccCC
Q 004275 168 QLVGPLPENLGNLKSLRRILLSSNNFTGSIPESYGNLKNLTEFRIDGSNLT 218 (764)
Q Consensus 168 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~ 218 (764)
++++..|..|..+++|++|+|++|+++...+..|..+++|+.|++++|.+.
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLY 139 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEE
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCee
Confidence 888777777888888888888888887655556777777777777777664
No 141
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.57 E-value=1.3e-14 Score=142.70 Aligned_cols=128 Identities=21% Similarity=0.362 Sum_probs=100.9
Q ss_pred CEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEeeCCcCCCCCCccCCCCCCCcEEEccCc
Q 004275 112 QEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVLEDNQLVGPLPENLGNLKSLRRILLSSN 191 (764)
Q Consensus 112 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N 191 (764)
+++++++|.++ .+|..+. ++|++|+|++|.++ .+|..|..+++|++|+|++|++++..+..|.++++|++|+|++|
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 57888888887 5665543 57888888888887 67788888888888888888888777777888888888888888
Q ss_pred cCCCCCcccccCCCCCcEEEccCccCCCcCcccccCCCCCCEEeeeCCcCCC
Q 004275 192 NFTGSIPESYGNLKNLTEFRIDGSNLTGRIPNFIGNWTKLDRLDLQGTSLEG 243 (764)
Q Consensus 192 ~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 243 (764)
++++..|..|..+++|++|+|++|.++...+..|..+++|+.|+|++|.+..
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 8887777778888888888888888876655567777778888877777653
No 142
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=99.57 E-value=4.5e-16 Score=163.31 Aligned_cols=106 Identities=20% Similarity=0.290 Sum_probs=85.7
Q ss_pred cCccccCeeeccCCeeEEEEEE----cCCCEEEEEEcCCcC--hhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEE
Q 004275 659 NNFDAANKIGEGGFGPVYKGTL----SDGAVIAVKQLSSKS--KQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLL 732 (764)
Q Consensus 659 ~~~~~~~~iG~G~~g~Vy~~~~----~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 732 (764)
++|+..+.||+|+||+||+|+. ..++.||||++.... ......+.+|+++|++++|||||++++++.+.+..|+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 4588999999999999999984 247899999997532 2233468899999999999999999999999999999
Q ss_pred EEcccCCCcHHHHHhcCCC--------------CCCCHHHHccccC
Q 004275 733 VYEYLENNSLARALFGNAI--------------TKITYTFSLHLWN 764 (764)
Q Consensus 733 v~Ey~~~GsL~~~L~~~~~--------------~~l~~~~~~~i~h 764 (764)
|||||++|+|.+++..... .+|+|.|+.+|+|
T Consensus 104 vmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiH 149 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIY 149 (304)
T ss_dssp EECCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred EEEcCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCcC
Confidence 9999999999999976431 3689999999999
No 143
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.56 E-value=3.7e-15 Score=157.26 Aligned_cols=89 Identities=31% Similarity=0.411 Sum_probs=71.8
Q ss_pred CccccCeeeccCCeeEEEEEEcCCCEEEEEEcCCcChhcHHHHHHHHHHHHhCCCCCccceEEEEEECC----EEEEEEc
Q 004275 660 NFDAANKIGEGGFGPVYKGTLSDGAVIAVKQLSSKSKQGNREFVNEIGMISALQHQNLVKLYGCCIEGN----QLLLVYE 735 (764)
Q Consensus 660 ~~~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~----~~~lv~E 735 (764)
++...+.||+|+||+||+|++ +|+.||||++...... ...+.+|+..+.+++|||||+++|+|.+.+ ..+||||
T Consensus 4 ~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~~-~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~E 81 (303)
T 3hmm_A 4 TIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREER-SWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSD 81 (303)
T ss_dssp GEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGHH-HHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEE
T ss_pred EEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccchh-hHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEec
Confidence 466778999999999999998 5889999999654221 122345556667899999999999998754 5799999
Q ss_pred ccCCCcHHHHHhcCC
Q 004275 736 YLENNSLARALFGNA 750 (764)
Q Consensus 736 y~~~GsL~~~L~~~~ 750 (764)
||++|+|.++|+...
T Consensus 82 y~~~gsL~~~l~~~~ 96 (303)
T 3hmm_A 82 YHEHGSLFDYLNRYT 96 (303)
T ss_dssp CCTTCBHHHHHHHCC
T ss_pred CCCCCcHHHHHHhCC
Confidence 999999999998653
No 144
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.56 E-value=2.3e-14 Score=138.65 Aligned_cols=131 Identities=18% Similarity=0.227 Sum_probs=83.8
Q ss_pred EEEEEcCCCcccccCCccCCCCCCCCEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEeeC
Q 004275 87 VTVILLKGFNLAGVIPEEFGNLTFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVLED 166 (764)
Q Consensus 87 v~~L~L~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~ 166 (764)
.+.++++++++.. +|..+ .++|++|++++|.+++..+..|..+++|++|+|++|.+++..+..|+.+++|++|+|++
T Consensus 9 ~~~l~~~~~~l~~-~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 9 GTEIRCNSKGLTS-VPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TTEEECCSSCCSS-CCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCcc-CCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 3456777777654 44333 35777777777777765555667777777777777777755555566777777777777
Q ss_pred CcCCCCCCccCCCCCCCcEEEccCccCCCCCcccccCCCCCcEEEccCccCCCc
Q 004275 167 NQLVGPLPENLGNLKSLRRILLSSNNFTGSIPESYGNLKNLTEFRIDGSNLTGR 220 (764)
Q Consensus 167 N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ 220 (764)
|++++..+..+.++++|++|++++|++++..+..+..+++|++|++++|.+.+.
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 139 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 139 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeecc
Confidence 777655555566666666666666666644444445555555555555555543
No 145
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.55 E-value=2.7e-14 Score=138.20 Aligned_cols=133 Identities=19% Similarity=0.252 Sum_probs=100.5
Q ss_pred CCEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEeeCCcCCCCCCccCCCCCCCcEEEccC
Q 004275 111 LQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVLEDNQLVGPLPENLGNLKSLRRILLSS 190 (764)
Q Consensus 111 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~ 190 (764)
.+.+++++|+++ .+|..+ .++|++|++++|++++..+..|+.+++|++|+|++|++++..+..+..+++|++|++++
T Consensus 9 ~~~l~~~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 9 GTEIRCNSKGLT-SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TTEEECCSSCCS-SCCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCc-cCCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 467788888776 355433 36788888888888766666677888888888888888766666677888888888888
Q ss_pred ccCCCCCcccccCCCCCcEEEccCccCCCcCcccccCCCCCCEEeeeCCcCCCCCc
Q 004275 191 NNFTGSIPESYGNLKNLTEFRIDGSNLTGRIPNFIGNWTKLDRLDLQGTSLEGPIP 246 (764)
Q Consensus 191 N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 246 (764)
|++++..+..+..+++|++|++++|.+++..+..+..+++|++|++++|.+.+..|
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 88887666667788888888888888886655566778888888888888876544
No 146
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.53 E-value=1.7e-14 Score=154.30 Aligned_cols=240 Identities=15% Similarity=0.113 Sum_probs=123.0
Q ss_pred eeEEEEEcCCCcccccCCccCCC-CCCCCEEEccCCcCC--c------------------cCchhhhc--------CCCC
Q 004275 85 CHVTVILLKGFNLAGVIPEEFGN-LTFLQEVDLSRNYFN--G------------------SLPKSFAR--------LQNL 135 (764)
Q Consensus 85 ~~v~~L~L~~~~l~g~~p~~l~~-L~~L~~L~Ls~N~l~--~------------------~~p~~~~~--------l~~L 135 (764)
.+++.|.++++ +...--..+.. +++|++|||++|++. . ..+..|.+ +++|
T Consensus 25 ~~l~~L~l~g~-i~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~~~~~~~~~~~~~~~~I~~~aF~~~~~~~~~g~~~L 103 (329)
T 3sb4_A 25 NSITHLTLTGK-LNAEDFRHLRDEFPSLKVLDISNAEIKMYSGKAGTYPNGKFYIYMANFVPAYAFSNVVNGVTKGKQTL 103 (329)
T ss_dssp HHCSEEEEEEE-ECHHHHHHHHHSCTTCCEEEEEEEEECCEEESSSSSGGGCCEEECTTEECTTTTEEEETTEEEECTTC
T ss_pred CceeEEEEecc-ccHHHHHHHHHhhccCeEEecCcceeEEecCccccccccccccccccccCHHHhcccccccccccCCC
Confidence 35667777643 11110112222 788999999998887 1 11233444 5666
Q ss_pred cEEecccCcCcccCCcCcCCCCCCCEEEeeCCcCCCCCCccCCCCCCCcEEEccCccC----CCCCcccccCCCCCc-EE
Q 004275 136 TKLLILGNRLSGSIPLEIGDISTLEELVLEDNQLVGPLPENLGNLKSLRRILLSSNNF----TGSIPESYGNLKNLT-EF 210 (764)
Q Consensus 136 ~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l----~~~~p~~~~~l~~L~-~L 210 (764)
+.|+|.+ .++..-+..|.++++|++|++++|.+....+..|..+.++..+.+..+.. ...-...|.++.+|+ .+
T Consensus 104 ~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~~~i 182 (329)
T 3sb4_A 104 EKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLETTI 182 (329)
T ss_dssp CC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCEEEE
T ss_pred cEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccceeE
Confidence 6666655 55544444555666666666666655544444555555555544443211 111122233333333 22
Q ss_pred EccCccCCCcCccc----------------------------ccCCCCCCEEeeeCCcCCCCCccchhcCCCCCEEEcCC
Q 004275 211 RIDGSNLTGRIPNF----------------------------IGNWTKLDRLDLQGTSLEGPIPSTISQLKNLTELRISD 262 (764)
Q Consensus 211 ~L~~n~l~~~~p~~----------------------------~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~ 262 (764)
.+.... .++.. ...+++|+.|+|++|+++...+..|..+++|+.|++.+
T Consensus 183 ~~~~~~---~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~ 259 (329)
T 3sb4_A 183 QVGAMG---KLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPH 259 (329)
T ss_dssp EECTTC---CHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCT
T ss_pred EecCCC---cHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCc
Confidence 221100 00000 01245666666666666655555666666666666665
Q ss_pred CCCCCCCCCCccCCcccc-ccccccccccccCCccccCCCCCCEEeccCCCCCCCccccccCCCCCCEEe
Q 004275 263 LKGSSSSFPNLQDMKKME-RLILRNCLITGRIPEYIEDMTDLKILDLSFNQLTGPVPGILQNLKKIDYIF 331 (764)
Q Consensus 263 n~~~~~~~~~l~~l~~L~-~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 331 (764)
| ........|.++++|+ .+++.+ .++...+..|.++++|+.++++.|+++...+.+|.++++|+.++
T Consensus 260 n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 260 N-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp T-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEE
T ss_pred c-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhc
Confidence 3 3333333466666666 666665 55544555666666666666666666655555666666666554
No 147
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=99.52 E-value=1.9e-14 Score=165.11 Aligned_cols=107 Identities=21% Similarity=0.362 Sum_probs=95.1
Q ss_pred hcCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcChhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEEcc
Q 004275 658 TNNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKSKQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVYEY 736 (764)
Q Consensus 658 ~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 736 (764)
.++|+..+.||+|+||.||+|+. .+|+.||||.+........+.+.+|+++|++++|||||++++++.+.+..||||||
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~ 235 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF 235 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEee
Confidence 35789999999999999999995 67999999999776655567899999999999999999999999999999999999
Q ss_pred cCCCcHHHHHhcCCC---------------CCCCHHHHccccC
Q 004275 737 LENNSLARALFGNAI---------------TKITYTFSLHLWN 764 (764)
Q Consensus 737 ~~~GsL~~~L~~~~~---------------~~l~~~~~~~i~h 764 (764)
|++|+|.++|..+.. .+|.|.|..+|+|
T Consensus 236 ~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiH 278 (573)
T 3uto_A 236 MSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVH 278 (573)
T ss_dssp CCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred cCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCeee
Confidence 999999999965421 3688999999998
No 148
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=99.49 E-value=2.1e-14 Score=156.93 Aligned_cols=105 Identities=15% Similarity=0.371 Sum_probs=88.9
Q ss_pred cCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcC--hhcHHHHHHHHHHHHhCCCCCccceEEEEEEC------CE
Q 004275 659 NNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKS--KQGNREFVNEIGMISALQHQNLVKLYGCCIEG------NQ 729 (764)
Q Consensus 659 ~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~------~~ 729 (764)
++|+..+.||+|+||+||+|+. .+|+.||||++.... ....+.+.+|+++|++++|||||++++++... +.
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 4688999999999999999994 679999999997542 33456789999999999999999999998643 56
Q ss_pred EEEEEcccCCCcHHHHHhcCCC--------------CCCCHHHHccccC
Q 004275 730 LLLVYEYLENNSLARALFGNAI--------------TKITYTFSLHLWN 764 (764)
Q Consensus 730 ~~lv~Ey~~~GsL~~~L~~~~~--------------~~l~~~~~~~i~h 764 (764)
.|||||||+ |+|.+++..... .+|.|.|..+|+|
T Consensus 134 ~~ivmE~~~-g~L~~~i~~~~~l~~~~~~~~~~qil~al~ylH~~~iiH 181 (398)
T 4b99_A 134 VYVVLDLME-SDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIH 181 (398)
T ss_dssp EEEEEECCS-EEHHHHHTSSSCCCHHHHHHHHHHHHHHHHHHHHTTCBC
T ss_pred EEEEEeCCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCcC
Confidence 899999996 789999976532 3689999999999
No 149
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.48 E-value=4e-16 Score=154.12 Aligned_cols=147 Identities=18% Similarity=0.279 Sum_probs=99.0
Q ss_pred CCCCCEEEccCCcCCccCch------hhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEeeCCcCCCCCCccCCCCC
Q 004275 108 LTFLQEVDLSRNYFNGSLPK------SFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVLEDNQLVGPLPENLGNLK 181 (764)
Q Consensus 108 L~~L~~L~Ls~N~l~~~~p~------~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~ 181 (764)
...++.++++.+.+.+.+|. .|..+++|++|+|++|.+++ +| .+..+++|++|++++|.++ .+|..+..++
T Consensus 17 ~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~ 93 (198)
T 1ds9_A 17 RKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVAD 93 (198)
T ss_dssp TTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHH
T ss_pred cccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCC
Confidence 34455555555555555554 67777777777777777764 55 6677777777777777776 4566666667
Q ss_pred CCcEEEccCccCCCCCcccccCCCCCcEEEccCccCCCcCc-ccccCCCCCCEEeeeCCcCCCCCccc----------hh
Q 004275 182 SLRRILLSSNNFTGSIPESYGNLKNLTEFRIDGSNLTGRIP-NFIGNWTKLDRLDLQGTSLEGPIPST----------IS 250 (764)
Q Consensus 182 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~----------l~ 250 (764)
+|++|++++|++++ +| .+..+++|++|++++|.+++..+ ..+..+++|++|++++|.+++.+|.. +.
T Consensus 94 ~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~ 171 (198)
T 1ds9_A 94 TLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVK 171 (198)
T ss_dssp HCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHH
T ss_pred cCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHH
Confidence 77777777777765 34 56777777777777777764322 46777778888888888776655442 66
Q ss_pred cCCCCCEEE
Q 004275 251 QLKNLTELR 259 (764)
Q Consensus 251 ~l~~L~~L~ 259 (764)
.+++|+.|+
T Consensus 172 ~l~~L~~Ld 180 (198)
T 1ds9_A 172 RLPNLKKLD 180 (198)
T ss_dssp HCSSCSEEC
T ss_pred hCCCcEEEC
Confidence 777777765
No 150
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.47 E-value=5.4e-14 Score=135.97 Aligned_cols=132 Identities=17% Similarity=0.206 Sum_probs=85.1
Q ss_pred CCCCCCCCEEEccCCcCCccCchhhhcCC-CCcEEecccCcCcccCCcCcCCCCCCCEEEeeCCcCCCCCCccCCCCCCC
Q 004275 105 FGNLTFLQEVDLSRNYFNGSLPKSFARLQ-NLTKLLILGNRLSGSIPLEIGDISTLEELVLEDNQLVGPLPENLGNLKSL 183 (764)
Q Consensus 105 l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L 183 (764)
+..+++|++|+|++|.++. +|. +..+. +|++|+|++|.+++. ..++.+++|++|+|++|.+++..+..+..+++|
T Consensus 15 ~~~~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 90 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDL 90 (176)
T ss_dssp EECTTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTC
T ss_pred cCCcCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCC
Confidence 4566777777777777763 444 44443 777777777777754 566777777777777777765433334667777
Q ss_pred cEEEccCccCCCCCcc--cccCCCCCcEEEccCccCCCcCccc----ccCCCCCCEEeeeCCcCC
Q 004275 184 RRILLSSNNFTGSIPE--SYGNLKNLTEFRIDGSNLTGRIPNF----IGNWTKLDRLDLQGTSLE 242 (764)
Q Consensus 184 ~~L~Ls~N~l~~~~p~--~~~~l~~L~~L~L~~n~l~~~~p~~----~~~l~~L~~L~L~~N~l~ 242 (764)
++|+|++|+++ .+|. .+..+++|+.|++++|.++ .+|.. +..+++|+.|+++.|...
T Consensus 91 ~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 91 TELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred CEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 77777777774 3444 5666667777777776665 33443 566666666666666543
No 151
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.47 E-value=3e-14 Score=152.40 Aligned_cols=249 Identities=12% Similarity=0.079 Sum_probs=141.6
Q ss_pred CCCCCCEEEccCCcCCccCchhhhc-CCCCcEEecccCcCc--ccCCcCcCCCCCCCEEEeeCCcCCCCCCccCCC----
Q 004275 107 NLTFLQEVDLSRNYFNGSLPKSFAR-LQNLTKLLILGNRLS--GSIPLEIGDISTLEELVLEDNQLVGPLPENLGN---- 179 (764)
Q Consensus 107 ~L~~L~~L~Ls~N~l~~~~p~~~~~-l~~L~~L~Ls~n~l~--~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~---- 179 (764)
.+.+|+.|.++++ +...--..+.. +++|+.|||++|++. ...+. .++.++.+.+..|.+. +..|.+
T Consensus 23 ~~~~l~~L~l~g~-i~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~~---~~~~~~~~~~~~~~I~---~~aF~~~~~~ 95 (329)
T 3sb4_A 23 EANSITHLTLTGK-LNAEDFRHLRDEFPSLKVLDISNAEIKMYSGKAG---TYPNGKFYIYMANFVP---AYAFSNVVNG 95 (329)
T ss_dssp HHHHCSEEEEEEE-ECHHHHHHHHHSCTTCCEEEEEEEEECCEEESSS---SSGGGCCEEECTTEEC---TTTTEEEETT
T ss_pred hhCceeEEEEecc-ccHHHHHHHHHhhccCeEEecCcceeEEecCccc---cccccccccccccccC---HHHhcccccc
Confidence 3778999999865 22221223444 788999999999987 22222 2222444555555322 234555
Q ss_pred ----CCCCcEEEccCccCCCCCcccccCCCCCcEEEccCccCCCcCcccccCCCCCCEEeeeCCc----CCCCCccchhc
Q 004275 180 ----LKSLRRILLSSNNFTGSIPESYGNLKNLTEFRIDGSNLTGRIPNFIGNWTKLDRLDLQGTS----LEGPIPSTISQ 251 (764)
Q Consensus 180 ----l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~----l~~~~p~~l~~ 251 (764)
+++|+.|+|.. .++..-+.+|.++++|+.|++.+|.+....+..|..+.++..+.+..+. ........|..
T Consensus 96 ~~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~ 174 (329)
T 3sb4_A 96 VTKGKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIE 174 (329)
T ss_dssp EEEECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEE
T ss_pred cccccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhcccccccccccc
Confidence 77777777776 6665555567777777777777777665555666665555555544321 11111222322
Q ss_pred CCCCC--------------------------EEEcCCCCCCCCCCCCc-cCCccccccccccccccccCCccccCCCCCC
Q 004275 252 LKNLT--------------------------ELRISDLKGSSSSFPNL-QDMKKMERLILRNCLITGRIPEYIEDMTDLK 304 (764)
Q Consensus 252 l~~L~--------------------------~L~L~~n~~~~~~~~~l-~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 304 (764)
+.+|+ .+.+.+ ......+..+ ..+++|+.++|++|+++...+..|.++++|+
T Consensus 175 ~~~L~~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~-~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~ 253 (329)
T 3sb4_A 175 GEPLETTIQVGAMGKLEDEIMKAGLQPRDINFLTIEG-KLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLL 253 (329)
T ss_dssp SCCCEEEEEECTTCCHHHHHHHTTCCGGGCSEEEEEE-CCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCC
T ss_pred ccccceeEEecCCCcHHHHHhhcccCccccceEEEee-eecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCC
Confidence 33332 332222 1100000001 1256777777777777755556677777777
Q ss_pred EEeccCCCCCCCccccccCCCCCC-EEeccCCcCcCCCChhhh--cCCCeEEeecCcCCCCCCcc
Q 004275 305 ILDLSFNQLTGPVPGILQNLKKID-YIFLTNNSLSGTLPDWIL--TSEKNLDLSYNNFTESSPAT 366 (764)
Q Consensus 305 ~L~Ls~N~l~g~~p~~~~~l~~L~-~L~L~~N~l~g~~p~~~~--~~l~~L~Ls~N~l~~~~p~~ 366 (764)
.|++.+| ++...+.+|.++++|+ .+++.+ .++..-+..|. ..++.++++.|+++...+..
T Consensus 254 ~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~a 316 (329)
T 3sb4_A 254 KIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDEL 316 (329)
T ss_dssp EEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTT
T ss_pred EEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhh
Confidence 7777776 6645556777777777 777776 55533344442 34567777777777665544
No 152
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=99.47 E-value=1.2e-13 Score=147.24 Aligned_cols=119 Identities=27% Similarity=0.417 Sum_probs=99.1
Q ss_pred cccccHHHHHHhhcC----------ccccCeeeccCCeeEEEEEEc-CCCEEEEEEcCCcChhcHHHHHHHHHHHHhCCC
Q 004275 646 TGYFTLRQIKAATNN----------FDAANKIGEGGFGPVYKGTLS-DGAVIAVKQLSSKSKQGNREFVNEIGMISALQH 714 (764)
Q Consensus 646 ~~~~~~~~~~~~~~~----------~~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H 714 (764)
.+.++++++..+++. |+..+.||+|+||.||+|+.. +|+.||||++........+.+.+|++++++++|
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h 101 (321)
T 2c30_A 22 SGVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQH 101 (321)
T ss_dssp ---CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCC
T ss_pred CCcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCC
Confidence 356778888777654 666789999999999999965 799999999976655566789999999999999
Q ss_pred CCccceEEEEEECCEEEEEEcccCCCcHHHHHhcCCC-------------CCCCHHHHccccC
Q 004275 715 QNLVKLYGCCIEGNQLLLVYEYLENNSLARALFGNAI-------------TKITYTFSLHLWN 764 (764)
Q Consensus 715 ~niv~l~g~~~~~~~~~lv~Ey~~~GsL~~~L~~~~~-------------~~l~~~~~~~i~h 764 (764)
||||++++++...+..++||||+++|+|.+++..... .++.+.|..+|+|
T Consensus 102 ~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH 164 (321)
T 2c30_A 102 FNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIATVCEAVLQALAYLHAQGVIH 164 (321)
T ss_dssp TTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred CCcceEEEEEEECCEEEEEEecCCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 9999999999999999999999999999999875431 2477778888877
No 153
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.46 E-value=2.2e-16 Score=155.98 Aligned_cols=149 Identities=25% Similarity=0.346 Sum_probs=126.3
Q ss_pred EEEEEcCCCcccccCCc------cCCCCCCCCEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCC
Q 004275 87 VTVILLKGFNLAGVIPE------EFGNLTFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLE 160 (764)
Q Consensus 87 v~~L~L~~~~l~g~~p~------~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~ 160 (764)
++.++++.+.+.|.+|. .+..+++|++|+|++|.+++ +| .+..+++|++|++++|.++ .+|..+..+++|+
T Consensus 20 l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~ 96 (198)
T 1ds9_A 20 VVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLE 96 (198)
T ss_dssp CCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCS
T ss_pred ccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCC
Confidence 44455666666666665 88999999999999999986 77 8999999999999999998 7888888889999
Q ss_pred EEEeeCCcCCCCCCccCCCCCCCcEEEccCccCCCCCc-ccccCCCCCcEEEccCccCCCcCccc----------ccCCC
Q 004275 161 ELVLEDNQLVGPLPENLGNLKSLRRILLSSNNFTGSIP-ESYGNLKNLTEFRIDGSNLTGRIPNF----------IGNWT 229 (764)
Q Consensus 161 ~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~n~l~~~~p~~----------~~~l~ 229 (764)
+|+|++|++++ +| .+..+++|++|++++|++++..+ ..+..+++|++|++++|.+++.+|.. +..++
T Consensus 97 ~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~l~ 174 (198)
T 1ds9_A 97 ELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLP 174 (198)
T ss_dssp EEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHHHCS
T ss_pred EEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHHhCC
Confidence 99999999986 55 68889999999999999985332 47899999999999999998776653 78899
Q ss_pred CCCEEeeeCCcCC
Q 004275 230 KLDRLDLQGTSLE 242 (764)
Q Consensus 230 ~L~~L~L~~N~l~ 242 (764)
+|+.|| +|.++
T Consensus 175 ~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 175 NLKKLD--GMPVD 185 (198)
T ss_dssp SCSEEC--CGGGT
T ss_pred CcEEEC--CcccC
Confidence 999987 66665
No 154
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=99.45 E-value=9.5e-14 Score=149.95 Aligned_cols=107 Identities=22% Similarity=0.360 Sum_probs=91.1
Q ss_pred HhhcCccccCeeeccCCeeEEEEEEc----CCCEEEEEEcCCcChhcHHHHHHHHHHHHhC-CCCCccceEEEEEECCEE
Q 004275 656 AATNNFDAANKIGEGGFGPVYKGTLS----DGAVIAVKQLSSKSKQGNREFVNEIGMISAL-QHQNLVKLYGCCIEGNQL 730 (764)
Q Consensus 656 ~~~~~~~~~~~iG~G~~g~Vy~~~~~----~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~ 730 (764)
...+.|+..+.||+|+||+||+|+.+ .++.||||++.... ....+.+|++++..+ +|||||++++++.+.+..
T Consensus 18 ~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~ 95 (361)
T 4f9c_A 18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHV 95 (361)
T ss_dssp GGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEE
T ss_pred CccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEE
Confidence 34577999999999999999999842 46789999986543 345688999999998 699999999999999999
Q ss_pred EEEEcccCCCcHHHHHhcCC-----------CCCCCHHHHccccC
Q 004275 731 LLVYEYLENNSLARALFGNA-----------ITKITYTFSLHLWN 764 (764)
Q Consensus 731 ~lv~Ey~~~GsL~~~L~~~~-----------~~~l~~~~~~~i~h 764 (764)
|+|||||++|+|.+++..-. ..+|.|.|..+|+|
T Consensus 96 ~lvmE~~~g~~L~~~~~~l~~~~~~~~~~qll~al~ylH~~gIiH 140 (361)
T 4f9c_A 96 VIAMPYLEHESFLDILNSLSFQEVREYMLNLFKALKRIHQFGIVH 140 (361)
T ss_dssp EEEEECCCCCCHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred EEEEeCCCcccHHHHHcCCCHHHHHHHHHHHHHHHHHHHHCCeEe
Confidence 99999999999999985421 14699999999999
No 155
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=99.43 E-value=2.9e-14 Score=151.88 Aligned_cols=115 Identities=42% Similarity=0.709 Sum_probs=97.5
Q ss_pred cHHHHHHhhcCccccCeeeccCCeeEEEEEEcCCCEEEEEEcCCcChhcHHHHHHHHHHHHhCCCCCccceEEEEEECCE
Q 004275 650 TLRQIKAATNNFDAANKIGEGGFGPVYKGTLSDGAVIAVKQLSSKSKQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQ 729 (764)
Q Consensus 650 ~~~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~ 729 (764)
++.++..++++|+..+.||+|+||.||+|+.++++.||||++........++|.+|++++++++|||||++++++...+.
T Consensus 30 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 109 (321)
T 2qkw_B 30 PLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNE 109 (321)
T ss_dssp CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTC
T ss_pred cHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCe
Confidence 33445567888999999999999999999988899999999977655556789999999999999999999999999999
Q ss_pred EEEEEcccCCCcHHHHHhcCCC------------------CCCCHHHHccccC
Q 004275 730 LLLVYEYLENNSLARALFGNAI------------------TKITYTFSLHLWN 764 (764)
Q Consensus 730 ~~lv~Ey~~~GsL~~~L~~~~~------------------~~l~~~~~~~i~h 764 (764)
.++||||+++|+|.+++..... .++.+.|..+|+|
T Consensus 110 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH 162 (321)
T 2qkw_B 110 MILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIH 162 (321)
T ss_dssp CEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred EEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCeec
Confidence 9999999999999999875432 1355667777776
No 156
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.43 E-value=1.7e-13 Score=132.38 Aligned_cols=130 Identities=15% Similarity=0.228 Sum_probs=98.9
Q ss_pred hhhcCCCCcEEecccCcCcccCCcCcCCCC-CCCEEEeeCCcCCCCCCccCCCCCCCcEEEccCccCCCCCcccccCCCC
Q 004275 128 SFARLQNLTKLLILGNRLSGSIPLEIGDIS-TLEELVLEDNQLVGPLPENLGNLKSLRRILLSSNNFTGSIPESYGNLKN 206 (764)
Q Consensus 128 ~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 206 (764)
.+..+++|++|++++|.++ .+|. +..+. +|++|+|++|.+++. ..+..+++|++|+|++|++++..+..+..+++
T Consensus 14 ~~~~~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 89 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPD 89 (176)
T ss_dssp EEECTTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTT
T ss_pred hcCCcCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCC
Confidence 3567788999999999888 4554 44444 899999999988864 57888889999999999888655555688888
Q ss_pred CcEEEccCccCCCcCcc--cccCCCCCCEEeeeCCcCCCCCccc----hhcCCCCCEEEcCCC
Q 004275 207 LTEFRIDGSNLTGRIPN--FIGNWTKLDRLDLQGTSLEGPIPST----ISQLKNLTELRISDL 263 (764)
Q Consensus 207 L~~L~L~~n~l~~~~p~--~~~~l~~L~~L~L~~N~l~~~~p~~----l~~l~~L~~L~L~~n 263 (764)
|++|++++|.++ .+|. .+..+++|+.|++++|.++. +|.. +..+++|+.|+++.|
T Consensus 90 L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~-~~~~~~~~~~~l~~L~~Ld~~~n 150 (176)
T 1a9n_A 90 LTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTN-KKHYRLYVIYKVPQVRVLDFQKV 150 (176)
T ss_dssp CCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGG-STTHHHHHHHHCTTCSEETTEEC
T ss_pred CCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCC-cHhHHHHHHHHCCccceeCCCcC
Confidence 888888888885 4555 67788888888888888873 4443 677777777766654
No 157
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=99.42 E-value=1e-13 Score=153.80 Aligned_cols=115 Identities=23% Similarity=0.271 Sum_probs=95.6
Q ss_pred cHHHHHHhhcCccccCeeeccCCeeEEEEEEc-CCCEEEEEEcCCcCh---hcHHHHHHHHHHHHhCCCCCccceEEEEE
Q 004275 650 TLRQIKAATNNFDAANKIGEGGFGPVYKGTLS-DGAVIAVKQLSSKSK---QGNREFVNEIGMISALQHQNLVKLYGCCI 725 (764)
Q Consensus 650 ~~~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H~niv~l~g~~~ 725 (764)
.+.++...+++|+..++||+|+||+||+|+.. +++.||||++..... ...+.+.+|++++.+++|||||+++++|.
T Consensus 65 ~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 144 (437)
T 4aw2_A 65 KVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQ 144 (437)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEe
Confidence 34555666788999999999999999999964 578899999965321 12234889999999999999999999999
Q ss_pred ECCEEEEEEcccCCCcHHHHHhcCCC---------------CCCCHHHHccccC
Q 004275 726 EGNQLLLVYEYLENNSLARALFGNAI---------------TKITYTFSLHLWN 764 (764)
Q Consensus 726 ~~~~~~lv~Ey~~~GsL~~~L~~~~~---------------~~l~~~~~~~i~h 764 (764)
+.+..++|||||++|+|.++++.... .++.|.|..+|+|
T Consensus 145 ~~~~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~giiH 198 (437)
T 4aw2_A 145 DDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVH 198 (437)
T ss_dssp CSSEEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred eCCEEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhCCeEe
Confidence 99999999999999999999986321 2578888888888
No 158
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=99.41 E-value=4.1e-13 Score=142.12 Aligned_cols=106 Identities=23% Similarity=0.450 Sum_probs=92.5
Q ss_pred cCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcChhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEEccc
Q 004275 659 NNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKSKQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVYEYL 737 (764)
Q Consensus 659 ~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~ 737 (764)
++|...+.||+|+||.||+|+. .+++.||+|++........+.|.+|++++.+++|||||++++++.+.+..++||||+
T Consensus 10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~ 89 (310)
T 3s95_A 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYI 89 (310)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEec
Confidence 4578889999999999999995 568999999997766666788999999999999999999999999999999999999
Q ss_pred CCCcHHHHHhcCCC---------------CCCCHHHHccccC
Q 004275 738 ENNSLARALFGNAI---------------TKITYTFSLHLWN 764 (764)
Q Consensus 738 ~~GsL~~~L~~~~~---------------~~l~~~~~~~i~h 764 (764)
++|+|.+++..... .++.+.|..+|+|
T Consensus 90 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH 131 (310)
T 3s95_A 90 KGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIH 131 (310)
T ss_dssp TTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred CCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccC
Confidence 99999999986321 2467778888877
No 159
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=99.41 E-value=1e-13 Score=147.90 Aligned_cols=104 Identities=42% Similarity=0.767 Sum_probs=91.8
Q ss_pred ccccHHHHHHhhcCccccCeeeccCCeeEEEEEEcCCCEEEEEEcCCcCh-hcHHHHHHHHHHHHhCCCCCccceEEEEE
Q 004275 647 GYFTLRQIKAATNNFDAANKIGEGGFGPVYKGTLSDGAVIAVKQLSSKSK-QGNREFVNEIGMISALQHQNLVKLYGCCI 725 (764)
Q Consensus 647 ~~~~~~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~ 725 (764)
..+++.++..+.++|...+.||+|+||.||+|...+|+.||||++..... .....|.+|++++++++|||||+++++|.
T Consensus 18 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~ 97 (326)
T 3uim_A 18 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM 97 (326)
T ss_dssp EECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEEC
T ss_pred ceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEe
Confidence 46788999999999999999999999999999988899999999976432 22347999999999999999999999999
Q ss_pred ECCEEEEEEcccCCCcHHHHHhcCC
Q 004275 726 EGNQLLLVYEYLENNSLARALFGNA 750 (764)
Q Consensus 726 ~~~~~~lv~Ey~~~GsL~~~L~~~~ 750 (764)
..+..++||||+++|+|.++++...
T Consensus 98 ~~~~~~lv~e~~~~~~L~~~l~~~~ 122 (326)
T 3uim_A 98 TPTERLLVYPYMANGSVASCLRERP 122 (326)
T ss_dssp CSSCCEEEEECCTTCBHHHHHHCCS
T ss_pred cCCceEEEEEeccCCCHHHHHHhcc
Confidence 9999999999999999999998654
No 160
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.41 E-value=4.2e-12 Score=139.12 Aligned_cols=251 Identities=10% Similarity=0.053 Sum_probs=189.0
Q ss_pred cccccCCccCCCCCCCCEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEeeCCcCCCCCCc
Q 004275 96 NLAGVIPEEFGNLTFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVLEDNQLVGPLPE 175 (764)
Q Consensus 96 ~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 175 (764)
++...-..+|.+. +|+.++|..+ ++..-..+|.++ +|+.+.+.. .+...-+..|.++++|+.++|..|+++.....
T Consensus 123 ~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~ 198 (401)
T 4fdw_A 123 SVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPAS 198 (401)
T ss_dssp TCCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTT
T ss_pred ccCEehHhhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechh
Confidence 3444445567764 7999999876 665666778874 799999986 66656667899999999999999998854444
Q ss_pred cCCCCCCCcEEEccCccCCCCCcccccCCCCCcEEEccCccCCCcCcccccCCCCCCEEeeeCCcCCCCCccchhcCCCC
Q 004275 176 NLGNLKSLRRILLSSNNFTGSIPESYGNLKNLTEFRIDGSNLTGRIPNFIGNWTKLDRLDLQGTSLEGPIPSTISQLKNL 255 (764)
Q Consensus 176 ~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L 255 (764)
.|. ..+|+.+.|..+ ++..-...|.++++|+.+++..+ ++..-...|.+ .+|+.+.+. +.++.....+|..+++|
T Consensus 199 aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~lp-~~i~~I~~~aF~~c~~L 273 (401)
T 4fdw_A 199 TFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKLP-NGVTNIASRAFYYCPEL 273 (401)
T ss_dssp TTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEEE-TTCCEECTTTTTTCTTC
T ss_pred hEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEeC-CCccEEChhHhhCCCCC
Confidence 555 689999999854 66556678999999999999874 55444556766 789999994 45665667889999999
Q ss_pred CEEEcCCCCCC-----CCCCCCccCCccccccccccccccccCCccccCCCCCCEEeccCCCCCCCccccccCCCCCCEE
Q 004275 256 TELRISDLKGS-----SSSFPNLQDMKKMERLILRNCLITGRIPEYIEDMTDLKILDLSFNQLTGPVPGILQNLKKIDYI 330 (764)
Q Consensus 256 ~~L~L~~n~~~-----~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L 330 (764)
+.+++.++... ......|..+++|+.+++. +.++..-...|.++++|+.++|..| ++...+.+|.++ +|+.+
T Consensus 274 ~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l 350 (401)
T 4fdw_A 274 AEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEV 350 (401)
T ss_dssp CEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEE
T ss_pred CEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEE
Confidence 99999875443 1223348889999999998 4577666778999999999999665 765667789999 99999
Q ss_pred eccCCcCcCCCChhhh---cCCCeEEeecCc
Q 004275 331 FLTNNSLSGTLPDWIL---TSEKNLDLSYNN 358 (764)
Q Consensus 331 ~L~~N~l~g~~p~~~~---~~l~~L~Ls~N~ 358 (764)
++.+|.+....+..+. ..+..|.+..+.
T Consensus 351 ~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~ 381 (401)
T 4fdw_A 351 KVEGTTPPQVFEKVWYGFPDDITVIRVPAES 381 (401)
T ss_dssp EECCSSCCBCCCSSCCCSCTTCCEEEECGGG
T ss_pred EEcCCCCcccccccccCCCCCccEEEeCHHH
Confidence 9999988754444332 234566665554
No 161
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=99.41 E-value=1.8e-13 Score=156.49 Aligned_cols=106 Identities=22% Similarity=0.294 Sum_probs=87.4
Q ss_pred cCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcC---hhcHHHH---HHHHHHHHhCCCCCccceEEEEEECCEEE
Q 004275 659 NNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKS---KQGNREF---VNEIGMISALQHQNLVKLYGCCIEGNQLL 731 (764)
Q Consensus 659 ~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~f---~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 731 (764)
++|+..++||+|+||.||+|+. .+|+.||||++.+.. ......+ ..++++++.++|||||++++++.+.+..|
T Consensus 189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~ly 268 (689)
T 3v5w_A 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS 268 (689)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEE
Confidence 5699999999999999999995 579999999996432 1122233 34466777889999999999999999999
Q ss_pred EEEcccCCCcHHHHHhcCCC--------------CCCCHHHHccccC
Q 004275 732 LVYEYLENNSLARALFGNAI--------------TKITYTFSLHLWN 764 (764)
Q Consensus 732 lv~Ey~~~GsL~~~L~~~~~--------------~~l~~~~~~~i~h 764 (764)
+|||||++|+|.++|..... .+|.|.|..+|+|
T Consensus 269 lVmEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~~gIiH 315 (689)
T 3v5w_A 269 FILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVY 315 (689)
T ss_dssp EEECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTTTEEC
T ss_pred EEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 99999999999999975431 3689999999998
No 162
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=99.41 E-value=3.9e-13 Score=141.49 Aligned_cols=107 Identities=22% Similarity=0.447 Sum_probs=93.4
Q ss_pred hcCccccCeeeccCCeeEEEEE-EcCCCEEEEEEcCCcChhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEEcc
Q 004275 658 TNNFDAANKIGEGGFGPVYKGT-LSDGAVIAVKQLSSKSKQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVYEY 736 (764)
Q Consensus 658 ~~~~~~~~~iG~G~~g~Vy~~~-~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 736 (764)
.+.|...+.||+|+||.||+|. ..+|+.||||++........+.+.+|+.++++++|||||++++++...+..++||||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 98 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence 3568888999999999999998 467899999999765544567899999999999999999999999999999999999
Q ss_pred cCCCcHHHHHhcCCC-------------CCCCHHHHccccC
Q 004275 737 LENNSLARALFGNAI-------------TKITYTFSLHLWN 764 (764)
Q Consensus 737 ~~~GsL~~~L~~~~~-------------~~l~~~~~~~i~h 764 (764)
+++|+|.+++..... .++.|.|..+|+|
T Consensus 99 ~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H 139 (297)
T 3fxz_A 99 LAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIH 139 (297)
T ss_dssp CTTCBHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred CCCCCHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCcee
Confidence 999999999976431 3578888888888
No 163
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.40 E-value=1.1e-12 Score=125.95 Aligned_cols=107 Identities=31% Similarity=0.313 Sum_probs=83.3
Q ss_pred EEEEEcCCCcccccCCccCCCCCCCCEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEeeC
Q 004275 87 VTVILLKGFNLAGVIPEEFGNLTFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVLED 166 (764)
Q Consensus 87 v~~L~L~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~ 166 (764)
.+.++++++.+.. +|..+. ++|++|+|++|.+++..|..|.++++|++|+|++|++++..+..|..+++|++|+|++
T Consensus 11 ~~~l~~s~n~l~~-ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLAS-VPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcCc-cCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 4567888888765 665553 7788888888888887788888888888888888888866666678888888888888
Q ss_pred CcCCCCCCccCCCCCCCcEEEccCccCCCC
Q 004275 167 NQLVGPLPENLGNLKSLRRILLSSNNFTGS 196 (764)
Q Consensus 167 N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ 196 (764)
|++++..+..|.++++|++|+|++|.+...
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 117 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDCA 117 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCTT
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCCC
Confidence 888866666677888888888888877643
No 164
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.39 E-value=1e-11 Score=135.98 Aligned_cols=248 Identities=11% Similarity=0.090 Sum_probs=189.9
Q ss_pred CCCCCCEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEeeCCcCCCCCCccCCCCCCCcEE
Q 004275 107 NLTFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVLEDNQLVGPLPENLGNLKSLRRI 186 (764)
Q Consensus 107 ~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L 186 (764)
.+..++.+.+.+ .++..-..+|.++ +|+.+.+..+ ++..-...|.++ +|+.+.|.. .+...-+..|.++++|+.+
T Consensus 111 ~~~~l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l 185 (401)
T 4fdw_A 111 ILKGYNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKA 185 (401)
T ss_dssp ECSSCSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEE
T ss_pred ecCCccEEEECC-ccCEehHhhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCee
Confidence 347788888875 4555556778875 7999999877 665556678774 799999985 6665566789999999999
Q ss_pred EccCccCCCCCcccccCCCCCcEEEccCccCCCcCcccccCCCCCCEEeeeCCcCCCCCccchhcCCCCCEEEcCCCCCC
Q 004275 187 LLSSNNFTGSIPESYGNLKNLTEFRIDGSNLTGRIPNFIGNWTKLDRLDLQGTSLEGPIPSTISQLKNLTELRISDLKGS 266 (764)
Q Consensus 187 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~n~~~ 266 (764)
+++.|+++......|. ..+|+.+.+..+ ++..-...|.++++|+.+++..| ++.....+|.. .+|+.+.+.+ +..
T Consensus 186 ~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~lp~-~i~ 260 (401)
T 4fdw_A 186 DLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKLPN-GVT 260 (401)
T ss_dssp ECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEEET-TCC
T ss_pred ecCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEeCC-Ccc
Confidence 9999999855555565 689999999854 76666778999999999999875 55455566776 7899999965 555
Q ss_pred CCCCCCccCCcccccccccccccc-----ccCCccccCCCCCCEEeccCCCCCCCccccccCCCCCCEEeccCCcCcCCC
Q 004275 267 SSSFPNLQDMKKMERLILRNCLIT-----GRIPEYIEDMTDLKILDLSFNQLTGPVPGILQNLKKIDYIFLTNNSLSGTL 341 (764)
Q Consensus 267 ~~~~~~l~~l~~L~~L~Ls~N~l~-----~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~ 341 (764)
......|.++++|+.+++.+|.+. ...+..|.++++|+.+++. +.++.....+|.++.+|+.+.+.+| ++..-
T Consensus 261 ~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~ 338 (401)
T 4fdw_A 261 NIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQIN 338 (401)
T ss_dssp EECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEEC
T ss_pred EEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEc
Confidence 445556899999999999988775 3556789999999999999 4577566679999999999999765 55333
Q ss_pred Chhhh-cCCCeEEeecCcCCCCCCcc
Q 004275 342 PDWIL-TSEKNLDLSYNNFTESSPAT 366 (764)
Q Consensus 342 p~~~~-~~l~~L~Ls~N~l~~~~p~~ 366 (764)
+..|. ..++.+++++|.+....+..
T Consensus 339 ~~aF~~~~L~~l~l~~n~~~~l~~~~ 364 (401)
T 4fdw_A 339 FSAFNNTGIKEVKVEGTTPPQVFEKV 364 (401)
T ss_dssp TTSSSSSCCCEEEECCSSCCBCCCSS
T ss_pred HHhCCCCCCCEEEEcCCCCccccccc
Confidence 34442 26789999999876654443
No 165
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=99.39 E-value=5e-13 Score=142.76 Aligned_cols=107 Identities=21% Similarity=0.379 Sum_probs=92.8
Q ss_pred hcCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCc--ChhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEE
Q 004275 658 TNNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSK--SKQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVY 734 (764)
Q Consensus 658 ~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 734 (764)
.++|...+.||+|+||.||+|+. .+|+.||||++... .....+.+.+|++++++++|||||++++++...+..++||
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 93 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM 93 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 46788999999999999999995 68999999999653 3334567899999999999999999999999999999999
Q ss_pred cccCCCcHHHHHhcCCC--------------CCCCHHHHccccC
Q 004275 735 EYLENNSLARALFGNAI--------------TKITYTFSLHLWN 764 (764)
Q Consensus 735 Ey~~~GsL~~~L~~~~~--------------~~l~~~~~~~i~h 764 (764)
|||++|+|.+++..... .++.|.|..+|+|
T Consensus 94 e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivH 137 (328)
T 3fe3_A 94 EYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVH 137 (328)
T ss_dssp CCCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred ECCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEec
Confidence 99999999999965321 3588999999998
No 166
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=99.39 E-value=9e-13 Score=139.17 Aligned_cols=117 Identities=38% Similarity=0.612 Sum_probs=98.7
Q ss_pred ccccHHHHHHhhcCcccc------CeeeccCCeeEEEEEEcCCCEEEEEEcCCcC----hhcHHHHHHHHHHHHhCCCCC
Q 004275 647 GYFTLRQIKAATNNFDAA------NKIGEGGFGPVYKGTLSDGAVIAVKQLSSKS----KQGNREFVNEIGMISALQHQN 716 (764)
Q Consensus 647 ~~~~~~~~~~~~~~~~~~------~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~----~~~~~~f~~E~~~l~~l~H~n 716 (764)
..+++.++..++++|+.. +.||+|+||.||+|.. +++.||||++.... ....+.|.+|++++++++|||
T Consensus 13 ~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 91 (307)
T 2nru_A 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHEN 91 (307)
T ss_dssp EECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTT
T ss_pred CcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCC
Confidence 568999999999999888 8999999999999986 68899999986532 223567999999999999999
Q ss_pred ccceEEEEEECCEEEEEEcccCCCcHHHHHhcCCC-----------------CCCCHHHHccccC
Q 004275 717 LVKLYGCCIEGNQLLLVYEYLENNSLARALFGNAI-----------------TKITYTFSLHLWN 764 (764)
Q Consensus 717 iv~l~g~~~~~~~~~lv~Ey~~~GsL~~~L~~~~~-----------------~~l~~~~~~~i~h 764 (764)
|+++++++...+..++||||+++|+|.+++..... .++.+.|..+|+|
T Consensus 92 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H 156 (307)
T 2nru_A 92 LVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIH 156 (307)
T ss_dssp BCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred eEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCeec
Confidence 99999999998999999999999999999974221 2356677777776
No 167
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.38 E-value=1.8e-12 Score=124.41 Aligned_cols=105 Identities=21% Similarity=0.269 Sum_probs=60.5
Q ss_pred CCEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEeeCCcCCCCCCccCCCCCCCcEEEccC
Q 004275 111 LQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVLEDNQLVGPLPENLGNLKSLRRILLSS 190 (764)
Q Consensus 111 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~ 190 (764)
.++|++++|.++. +|..+ .++|++|+|++|++++..|..|..+++|++|+|++|++++..+..|.++++|++|+|++
T Consensus 11 ~~~l~~s~n~l~~-ip~~~--~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLAS-VPTGI--PTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCSS-CCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcCc-cCccC--CCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 4566777766653 55443 25566666666666655555566666666666666666654444455566666666666
Q ss_pred ccCCCCCcccccCCCCCcEEEccCccCC
Q 004275 191 NNFTGSIPESYGNLKNLTEFRIDGSNLT 218 (764)
Q Consensus 191 N~l~~~~p~~~~~l~~L~~L~L~~n~l~ 218 (764)
|++++..+..|..+++|++|+|++|.++
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 115 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWD 115 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCC
Confidence 6665444444555555555555555544
No 168
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=99.38 E-value=7.3e-13 Score=138.64 Aligned_cols=106 Identities=8% Similarity=0.001 Sum_probs=91.5
Q ss_pred cCccccCeeeccCCeeEEEEEEc-CCCEEEEEEcCCcCh---hcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEE
Q 004275 659 NNFDAANKIGEGGFGPVYKGTLS-DGAVIAVKQLSSKSK---QGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVY 734 (764)
Q Consensus 659 ~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 734 (764)
+.|...+.||+|+||.||+|+.. +++.||||.+..... ...+.|.+|++++.+++|||||++++++...+..|+||
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 110 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA 110 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence 45888899999999999999964 588999999976432 23478999999999999999999999999999999999
Q ss_pred cccCCCcHHHHHhcCCC------------CCCCHHHHccccC
Q 004275 735 EYLENNSLARALFGNAI------------TKITYTFSLHLWN 764 (764)
Q Consensus 735 Ey~~~GsL~~~L~~~~~------------~~l~~~~~~~i~h 764 (764)
||+++|+|.+++..... .+|.|.|..+|+|
T Consensus 111 e~~~g~~L~~~l~~~~~~~~~~~i~~ql~~aL~~lH~~givH 152 (286)
T 3uqc_A 111 EWIRGGSLQEVADTSPSPVGAIRAMQSLAAAADAAHRAGVAL 152 (286)
T ss_dssp ECCCEEEHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred EecCCCCHHHHHhcCCChHHHHHHHHHHHHHHHHHHHCCCcc
Confidence 99999999999965321 3588999999998
No 169
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=99.37 E-value=3.6e-13 Score=146.67 Aligned_cols=106 Identities=25% Similarity=0.498 Sum_probs=89.3
Q ss_pred cCccccCeeeccCCeeEEEEEEc----CCCEEEEEEcCCc-ChhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEE
Q 004275 659 NNFDAANKIGEGGFGPVYKGTLS----DGAVIAVKQLSSK-SKQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLV 733 (764)
Q Consensus 659 ~~~~~~~~iG~G~~g~Vy~~~~~----~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv 733 (764)
++|...+.||+|+||.||+|+.. ++..||||++... .....++|.+|++++++++|||||+++++|...+..++|
T Consensus 45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 124 (373)
T 2qol_A 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV 124 (373)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEE
Confidence 45788899999999999999854 5678999999764 333457899999999999999999999999998999999
Q ss_pred EcccCCCcHHHHHhcCCC---------------CCCCHHHHccccC
Q 004275 734 YEYLENNSLARALFGNAI---------------TKITYTFSLHLWN 764 (764)
Q Consensus 734 ~Ey~~~GsL~~~L~~~~~---------------~~l~~~~~~~i~h 764 (764)
||||++|+|.++++.... .++.+.|..+|+|
T Consensus 125 ~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH 170 (373)
T 2qol_A 125 TEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVH 170 (373)
T ss_dssp EECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred EeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeC
Confidence 999999999999986532 2467778888887
No 170
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.36 E-value=2.8e-12 Score=123.64 Aligned_cols=105 Identities=29% Similarity=0.326 Sum_probs=83.7
Q ss_pred EEEEcCCCcccccCCccCCCCCCCCEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEeeCC
Q 004275 88 TVILLKGFNLAGVIPEEFGNLTFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVLEDN 167 (764)
Q Consensus 88 ~~L~L~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N 167 (764)
+.++++++.+. .+|..+. ++|++|+|++|.+++..|..|.++++|++|+|++|++++..+..|..+++|++|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 56788888874 5676654 78889999999998877888888888888888888888655556788888888888888
Q ss_pred cCCCCCCccCCCCCCCcEEEccCccCCC
Q 004275 168 QLVGPLPENLGNLKSLRRILLSSNNFTG 195 (764)
Q Consensus 168 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 195 (764)
++++..+..|..+++|++|+|++|.+..
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c 119 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDC 119 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCT
T ss_pred ccceeCHHHhccccCCCEEEeCCCCccc
Confidence 8886555568888888888888888763
No 171
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.36 E-value=1.2e-12 Score=135.31 Aligned_cols=105 Identities=26% Similarity=0.479 Sum_probs=91.1
Q ss_pred cCccccCeeeccCCeeEEEEEEcCCCEEEEEEcCCcChhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEEcccC
Q 004275 659 NNFDAANKIGEGGFGPVYKGTLSDGAVIAVKQLSSKSKQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVYEYLE 738 (764)
Q Consensus 659 ~~~~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~ 738 (764)
++|...+.||+|+||.||+|+..+++.||||++..... ..++|.+|++++.+++||||+++++++.+.+..++||||++
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 88 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFME 88 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred hhceeeheecCCCccEEEEEEecCCCeEEEEEeccccc-CHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCC
Confidence 45888899999999999999988888999999976432 34679999999999999999999999999999999999999
Q ss_pred CCcHHHHHhcCCC---------------CCCCHHHHccccC
Q 004275 739 NNSLARALFGNAI---------------TKITYTFSLHLWN 764 (764)
Q Consensus 739 ~GsL~~~L~~~~~---------------~~l~~~~~~~i~h 764 (764)
+|+|.+++..... .++.+.|..+|+|
T Consensus 89 ~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H 129 (269)
T 4hcu_A 89 HGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIH 129 (269)
T ss_dssp TCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred CCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 9999999976432 2467788888887
No 172
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.35 E-value=3.2e-12 Score=123.19 Aligned_cols=104 Identities=18% Similarity=0.273 Sum_probs=66.8
Q ss_pred CEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEeeCCcCCCCCCccCCCCCCCcEEEccCc
Q 004275 112 QEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVLEDNQLVGPLPENLGNLKSLRRILLSSN 191 (764)
Q Consensus 112 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N 191 (764)
+.+++++|.++ .+|..+. ++|++|+|++|++++..|..|+.+++|++|+|++|++++..+..|.++++|++|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 56777777775 4565443 66777777777777666666777777777777777766544444566666666666666
Q ss_pred cCCCCCcccccCCCCCcEEEccCccCC
Q 004275 192 NFTGSIPESYGNLKNLTEFRIDGSNLT 218 (764)
Q Consensus 192 ~l~~~~p~~~~~l~~L~~L~L~~n~l~ 218 (764)
++++..+..|..+++|++|++++|.+.
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcc
Confidence 666544444555666666666665554
No 173
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=99.35 E-value=7.7e-13 Score=141.14 Aligned_cols=106 Identities=26% Similarity=0.453 Sum_probs=89.0
Q ss_pred cCccccCeeeccCCeeEEEEEEc----CCCEEEEEEcCCc-ChhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEE
Q 004275 659 NNFDAANKIGEGGFGPVYKGTLS----DGAVIAVKQLSSK-SKQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLV 733 (764)
Q Consensus 659 ~~~~~~~~iG~G~~g~Vy~~~~~----~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv 733 (764)
+.|...+.||+|+||.||+|... .+..||||++... .....++|.+|++++++++|||||++++++.+.+..++|
T Consensus 49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 128 (325)
T 3kul_A 49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIV 128 (325)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEE
T ss_pred hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEE
Confidence 45778899999999999999963 3456999999764 334457899999999999999999999999988899999
Q ss_pred EcccCCCcHHHHHhcCCC---------------CCCCHHHHccccC
Q 004275 734 YEYLENNSLARALFGNAI---------------TKITYTFSLHLWN 764 (764)
Q Consensus 734 ~Ey~~~GsL~~~L~~~~~---------------~~l~~~~~~~i~h 764 (764)
|||+++|+|.++++.... .++.+.|..+|+|
T Consensus 129 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH 174 (325)
T 3kul_A 129 TEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVH 174 (325)
T ss_dssp EECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred eeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeC
Confidence 999999999999975421 2467778888877
No 174
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=99.35 E-value=1.3e-12 Score=141.45 Aligned_cols=107 Identities=19% Similarity=0.306 Sum_probs=91.7
Q ss_pred hcCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcCh------hcHHHHHHHHHHHHhCCCCCccceEEEEEECCEE
Q 004275 658 TNNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKSK------QGNREFVNEIGMISALQHQNLVKLYGCCIEGNQL 730 (764)
Q Consensus 658 ~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~------~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~ 730 (764)
.+.|...+.||+|+||.||+|+. .+|+.||||.+..... ...+.+.+|++++.+++|||||++++++.+.+..
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 90 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV 90 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence 45688899999999999999995 4789999999965322 1346899999999999999999999999999999
Q ss_pred EEEEcccCCCcHHHHHhcCCC--------------CCCCHHHHccccC
Q 004275 731 LLVYEYLENNSLARALFGNAI--------------TKITYTFSLHLWN 764 (764)
Q Consensus 731 ~lv~Ey~~~GsL~~~L~~~~~--------------~~l~~~~~~~i~h 764 (764)
++||||+++|+|.+++..... .++.|.|..+|+|
T Consensus 91 ~lv~e~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH 138 (361)
T 2yab_A 91 VLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAH 138 (361)
T ss_dssp EEEEECCCSCBHHHHHTTCSCCBHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred EEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 999999999999999975432 3578888888888
No 175
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=99.35 E-value=4.3e-13 Score=147.55 Aligned_cols=114 Identities=20% Similarity=0.325 Sum_probs=95.2
Q ss_pred HHHHHHhhcCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcC---hhcHHHHHHHHHHHHhCCCCCccceEEEEEE
Q 004275 651 LRQIKAATNNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKS---KQGNREFVNEIGMISALQHQNLVKLYGCCIE 726 (764)
Q Consensus 651 ~~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~ 726 (764)
+.++....++|...+.||+|+||.||+|+. .+++.||+|++.... ....+.+.+|++++..++|||||++++++.+
T Consensus 61 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~ 140 (410)
T 3v8s_A 61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 140 (410)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred HHhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEE
Confidence 344455678899999999999999999996 468899999996521 1123458899999999999999999999999
Q ss_pred CCEEEEEEcccCCCcHHHHHhcCCC-------------CCCCHHHHccccC
Q 004275 727 GNQLLLVYEYLENNSLARALFGNAI-------------TKITYTFSLHLWN 764 (764)
Q Consensus 727 ~~~~~lv~Ey~~~GsL~~~L~~~~~-------------~~l~~~~~~~i~h 764 (764)
.+..|+|||||++|+|.++++.... .++.|.|..+|+|
T Consensus 141 ~~~~~lV~E~~~gg~L~~~l~~~~~~e~~~~~~~~qi~~aL~~LH~~givH 191 (410)
T 3v8s_A 141 DRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIH 191 (410)
T ss_dssp SSEEEEEECCCTTEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred CCEEEEEEeCCCCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEe
Confidence 9999999999999999999976431 3578899999988
No 176
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.34 E-value=1e-12 Score=141.44 Aligned_cols=108 Identities=21% Similarity=0.372 Sum_probs=91.8
Q ss_pred hhcCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcCh-hcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEE
Q 004275 657 ATNNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKSK-QGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVY 734 (764)
Q Consensus 657 ~~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 734 (764)
..+.|+..+.||+|+||.||+|+. .+|+.||||++..... ...+.+.+|++++++++|||||++++++...+..++||
T Consensus 8 l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 87 (347)
T 3zgw_A 8 LLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVL 87 (347)
T ss_dssp TTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEE
Confidence 356788999999999999999994 6889999999965432 23457899999999999999999999999999999999
Q ss_pred cccCCCcHHHHHhcCCC--------------CCCCHHHHccccC
Q 004275 735 EYLENNSLARALFGNAI--------------TKITYTFSLHLWN 764 (764)
Q Consensus 735 Ey~~~GsL~~~L~~~~~--------------~~l~~~~~~~i~h 764 (764)
|||++|+|.+++..... .++.|.|..+|+|
T Consensus 88 E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH 131 (347)
T 3zgw_A 88 EYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQGYAH 131 (347)
T ss_dssp ECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBC
T ss_pred eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEe
Confidence 99999999999965321 3578889999888
No 177
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=99.34 E-value=9.2e-13 Score=143.24 Aligned_cols=92 Identities=25% Similarity=0.526 Sum_probs=79.6
Q ss_pred hcCccccCeeeccCCeeEEEEEEc--------CCCEEEEEEcCCcC-hhcHHHHHHHHHHHHhC-CCCCccceEEEEEEC
Q 004275 658 TNNFDAANKIGEGGFGPVYKGTLS--------DGAVIAVKQLSSKS-KQGNREFVNEIGMISAL-QHQNLVKLYGCCIEG 727 (764)
Q Consensus 658 ~~~~~~~~~iG~G~~g~Vy~~~~~--------~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~ 727 (764)
.++|...+.||+|+||.||+|+.. ++..||||++.... ....+++.+|++++.++ +|||||+++++|...
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 356888899999999999999852 34579999997643 33456899999999999 899999999999999
Q ss_pred CEEEEEEcccCCCcHHHHHhcC
Q 004275 728 NQLLLVYEYLENNSLARALFGN 749 (764)
Q Consensus 728 ~~~~lv~Ey~~~GsL~~~L~~~ 749 (764)
+..++||||+++|+|.+++...
T Consensus 160 ~~~~lv~e~~~~g~L~~~l~~~ 181 (370)
T 2psq_A 160 GPLYVIVEYASKGNLREYLRAR 181 (370)
T ss_dssp SSCEEEEECCTTCBHHHHHHHT
T ss_pred CCEEEEEEcCCCCCHHHHHHhh
Confidence 9999999999999999999864
No 178
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=99.33 E-value=1.8e-12 Score=138.21 Aligned_cols=106 Identities=18% Similarity=0.381 Sum_probs=87.9
Q ss_pred cCccccCeeeccCCeeEEEEEEc-CCCEEEEEEcCCcC-hhcHHHHHHHHHHHHhCCCCCccceEEEEEECC--------
Q 004275 659 NNFDAANKIGEGGFGPVYKGTLS-DGAVIAVKQLSSKS-KQGNREFVNEIGMISALQHQNLVKLYGCCIEGN-------- 728 (764)
Q Consensus 659 ~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~-------- 728 (764)
++|+..+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|++++++++|||||++++++.+.+
T Consensus 6 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 85 (332)
T 3qd2_B 6 TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEM 85 (332)
T ss_dssp HHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHH
T ss_pred hcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhh
Confidence 45888999999999999999964 78999999996533 334578999999999999999999999987653
Q ss_pred -------------------------------------------------EEEEEEcccCCCcHHHHHhcCCC--------
Q 004275 729 -------------------------------------------------QLLLVYEYLENNSLARALFGNAI-------- 751 (764)
Q Consensus 729 -------------------------------------------------~~~lv~Ey~~~GsL~~~L~~~~~-------- 751 (764)
..++|||||++|+|.+++.....
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~ 165 (332)
T 3qd2_B 86 DEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGV 165 (332)
T ss_dssp HC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHHH
T ss_pred hhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhHH
Confidence 27999999999999999976432
Q ss_pred ---------CCCCHHHHccccC
Q 004275 752 ---------TKITYTFSLHLWN 764 (764)
Q Consensus 752 ---------~~l~~~~~~~i~h 764 (764)
.++.+.|..+|+|
T Consensus 166 ~~~i~~qi~~aL~~LH~~~ivH 187 (332)
T 3qd2_B 166 CLHIFIQIAEAVEFLHSKGLMH 187 (332)
T ss_dssp HHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHHHHHHHHHHhCCeee
Confidence 2477888888888
No 179
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=99.33 E-value=1e-12 Score=140.89 Aligned_cols=106 Identities=25% Similarity=0.300 Sum_probs=91.5
Q ss_pred cCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCc---ChhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEE
Q 004275 659 NNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSK---SKQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVY 734 (764)
Q Consensus 659 ~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 734 (764)
++|+..+.||+|+||.||+|+. .+|+.||||.+... .....+.+.+|++++.+++|||||++++++...+..++||
T Consensus 5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 84 (337)
T 1o6l_A 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM 84 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEE
Confidence 5688899999999999999995 47899999999653 2234567899999999999999999999999999999999
Q ss_pred cccCCCcHHHHHhcCCC--------------CCCCHHHHccccC
Q 004275 735 EYLENNSLARALFGNAI--------------TKITYTFSLHLWN 764 (764)
Q Consensus 735 Ey~~~GsL~~~L~~~~~--------------~~l~~~~~~~i~h 764 (764)
||+++|+|.+++..... .+|.+.|..+|+|
T Consensus 85 E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH 128 (337)
T 1o6l_A 85 EYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVY 128 (337)
T ss_dssp ECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBC
T ss_pred eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 99999999999975321 3588999999998
No 180
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=99.33 E-value=5.6e-13 Score=145.34 Aligned_cols=107 Identities=23% Similarity=0.441 Sum_probs=91.2
Q ss_pred hcCccccCeeeccCCeeEEEEEEc-CCCEEEEEEcCCcC-hhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEEc
Q 004275 658 TNNFDAANKIGEGGFGPVYKGTLS-DGAVIAVKQLSSKS-KQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVYE 735 (764)
Q Consensus 658 ~~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E 735 (764)
.++|...+.||+|+||.||+|+.. +++.||||.+.... ....++|.+|++++++++|||||+++|+|...+..++|||
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 192 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVME 192 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEE
Confidence 456888899999999999999975 78999999997543 2334578999999999999999999999998889999999
Q ss_pred ccCCCcHHHHHhcCCC---------------CCCCHHHHccccC
Q 004275 736 YLENNSLARALFGNAI---------------TKITYTFSLHLWN 764 (764)
Q Consensus 736 y~~~GsL~~~L~~~~~---------------~~l~~~~~~~i~h 764 (764)
||++|+|.++++.... .++.|.|..+|+|
T Consensus 193 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH 236 (377)
T 3cbl_A 193 LVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIH 236 (377)
T ss_dssp CCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred cCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcCC
Confidence 9999999999975321 3577888888888
No 181
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=99.33 E-value=8.8e-13 Score=138.44 Aligned_cols=106 Identities=30% Similarity=0.492 Sum_probs=90.3
Q ss_pred cCccccCeeeccCCeeEEEEEE-----cCCCEEEEEEcCCcChhcHHHHHHHHHHHHhCCCCCccceEEEEEEC--CEEE
Q 004275 659 NNFDAANKIGEGGFGPVYKGTL-----SDGAVIAVKQLSSKSKQGNREFVNEIGMISALQHQNLVKLYGCCIEG--NQLL 731 (764)
Q Consensus 659 ~~~~~~~~iG~G~~g~Vy~~~~-----~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--~~~~ 731 (764)
+.|+..+.||+|+||.||+|++ .+++.||||++........+.|.+|++++.+++|||||++++++... ...+
T Consensus 10 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 89 (295)
T 3ugc_A 10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK 89 (295)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCE
T ss_pred HHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceE
Confidence 4588889999999999999985 36789999999876666667899999999999999999999998654 4589
Q ss_pred EEEcccCCCcHHHHHhcCCC---------------CCCCHHHHccccC
Q 004275 732 LVYEYLENNSLARALFGNAI---------------TKITYTFSLHLWN 764 (764)
Q Consensus 732 lv~Ey~~~GsL~~~L~~~~~---------------~~l~~~~~~~i~h 764 (764)
+||||+++|+|.+++..... .++.+.|..+|+|
T Consensus 90 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH 137 (295)
T 3ugc_A 90 LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIH 137 (295)
T ss_dssp EEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred EEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcCCccc
Confidence 99999999999999976431 3577888888888
No 182
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=99.33 E-value=6.4e-13 Score=146.28 Aligned_cols=115 Identities=21% Similarity=0.253 Sum_probs=95.9
Q ss_pred cHHHHHHhhcCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcC---hhcHHHHHHHHHHHHhCCCCCccceEEEEE
Q 004275 650 TLRQIKAATNNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKS---KQGNREFVNEIGMISALQHQNLVKLYGCCI 725 (764)
Q Consensus 650 ~~~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~ 725 (764)
.+.+.....++|+..+.||+|+||.||+++. .+|+.||||++.+.. ....+.+.+|.+++.+++|||||++++++.
T Consensus 52 ~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 131 (412)
T 2vd5_A 52 RLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQ 131 (412)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEe
Confidence 3445555678899999999999999999996 578999999996532 122345889999999999999999999999
Q ss_pred ECCEEEEEEcccCCCcHHHHHhcCCC---------------CCCCHHHHccccC
Q 004275 726 EGNQLLLVYEYLENNSLARALFGNAI---------------TKITYTFSLHLWN 764 (764)
Q Consensus 726 ~~~~~~lv~Ey~~~GsL~~~L~~~~~---------------~~l~~~~~~~i~h 764 (764)
+.+..|+|||||++|+|.+++..... .++.+.|..+|+|
T Consensus 132 ~~~~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~giiH 185 (412)
T 2vd5_A 132 DENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVH 185 (412)
T ss_dssp CSSEEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred eCCEEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeee
Confidence 99999999999999999999975321 3578889999988
No 183
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=99.33 E-value=9.3e-13 Score=143.33 Aligned_cols=104 Identities=25% Similarity=0.448 Sum_probs=84.5
Q ss_pred ccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcChhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEEcccCC
Q 004275 661 FDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKSKQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVYEYLEN 739 (764)
Q Consensus 661 ~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~ 739 (764)
+...+.||+|+||.||+|+. .+|+.||||++........++|.+|++++.+++|||||++++++...+..++|||||++
T Consensus 91 ~~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~ 170 (373)
T 2x4f_A 91 VSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDG 170 (373)
T ss_dssp EEEEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred eecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCC
Confidence 33467899999999999985 57899999999876655667899999999999999999999999999999999999999
Q ss_pred CcHHHHHhcCC---------------CCCCCHHHHccccC
Q 004275 740 NSLARALFGNA---------------ITKITYTFSLHLWN 764 (764)
Q Consensus 740 GsL~~~L~~~~---------------~~~l~~~~~~~i~h 764 (764)
|+|.+++.... ..++.+.|..+|+|
T Consensus 171 ~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH 210 (373)
T 2x4f_A 171 GELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILH 210 (373)
T ss_dssp CEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred CcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 99999987542 13577888888887
No 184
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=99.33 E-value=2e-12 Score=135.83 Aligned_cols=107 Identities=22% Similarity=0.346 Sum_probs=91.0
Q ss_pred hcCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCc---ChhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEE
Q 004275 658 TNNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSK---SKQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLV 733 (764)
Q Consensus 658 ~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv 733 (764)
.+.|...+.||+|+||.||+|+. .+++.||+|.+... .....+.|.+|++++.+++|||||++++++...+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 89 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV 89 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence 35688899999999999999984 57889999998542 223346799999999999999999999999999999999
Q ss_pred EcccCCCcHHHHHhcCCC--------------CCCCHHHHccccC
Q 004275 734 YEYLENNSLARALFGNAI--------------TKITYTFSLHLWN 764 (764)
Q Consensus 734 ~Ey~~~GsL~~~L~~~~~--------------~~l~~~~~~~i~h 764 (764)
|||+++|+|.+++..... .++.+.|..+|+|
T Consensus 90 ~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H 134 (294)
T 4eqm_A 90 MEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIVH 134 (294)
T ss_dssp EECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred EeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 999999999999975431 3578888888888
No 185
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=99.33 E-value=3.3e-12 Score=136.03 Aligned_cols=106 Identities=17% Similarity=0.300 Sum_probs=91.0
Q ss_pred hcCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcChhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEEcc
Q 004275 658 TNNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKSKQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVYEY 736 (764)
Q Consensus 658 ~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 736 (764)
.+.|...+.||+|+||.||+|+. .+++.||+|.+.... .....+.+|++++.+++|||||++++++.+.+..++||||
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 82 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF 82 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence 45688899999999999999995 468899999997543 2346789999999999999999999999999999999999
Q ss_pred cCCCcHHHHHhcCCC---------------CCCCHHHHccccC
Q 004275 737 LENNSLARALFGNAI---------------TKITYTFSLHLWN 764 (764)
Q Consensus 737 ~~~GsL~~~L~~~~~---------------~~l~~~~~~~i~h 764 (764)
+++|+|.+++..... .++.+.|..+|+|
T Consensus 83 ~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~givH 125 (321)
T 1tki_A 83 ISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGH 125 (321)
T ss_dssp CCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCCc
Confidence 999999999976431 2477888888887
No 186
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=99.33 E-value=1.4e-12 Score=136.43 Aligned_cols=106 Identities=25% Similarity=0.437 Sum_probs=90.9
Q ss_pred cCccccCeeeccCCeeEEEEEEc-CC-------CEEEEEEcCCcChhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEE
Q 004275 659 NNFDAANKIGEGGFGPVYKGTLS-DG-------AVIAVKQLSSKSKQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQL 730 (764)
Q Consensus 659 ~~~~~~~~iG~G~~g~Vy~~~~~-~g-------~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~ 730 (764)
++|...+.||+|+||.||+|+.. ++ ..||+|.+........+.|.+|++++++++|||||++++++...+..
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 87 (289)
T 4fvq_A 8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDEN 87 (289)
T ss_dssp GGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCC
T ss_pred hHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCC
Confidence 45888899999999999999843 33 47999999776656678899999999999999999999999999999
Q ss_pred EEEEcccCCCcHHHHHhcCCC---------------CCCCHHHHccccC
Q 004275 731 LLVYEYLENNSLARALFGNAI---------------TKITYTFSLHLWN 764 (764)
Q Consensus 731 ~lv~Ey~~~GsL~~~L~~~~~---------------~~l~~~~~~~i~h 764 (764)
++||||+++|+|.+++..... .++.+.|..+|+|
T Consensus 88 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH 136 (289)
T 4fvq_A 88 ILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENTLIH 136 (289)
T ss_dssp EEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred EEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhCCeEC
Confidence 999999999999999976431 3577888888887
No 187
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=99.32 E-value=2.3e-12 Score=139.65 Aligned_cols=107 Identities=23% Similarity=0.393 Sum_probs=92.1
Q ss_pred hcCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCc--ChhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEE
Q 004275 658 TNNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSK--SKQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVY 734 (764)
Q Consensus 658 ~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 734 (764)
.++|...+.||+|+||.||+|+. .+|+.||||.+... .....+.+.+|++++++++|||||++++++.+.+..++||
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~ 107 (362)
T 2bdw_A 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 107 (362)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 35688899999999999999985 46899999999653 2334567999999999999999999999999999999999
Q ss_pred cccCCCcHHHHHhcCCC--------------CCCCHHHHccccC
Q 004275 735 EYLENNSLARALFGNAI--------------TKITYTFSLHLWN 764 (764)
Q Consensus 735 Ey~~~GsL~~~L~~~~~--------------~~l~~~~~~~i~h 764 (764)
||+++|+|.+++..... .++.|.|..+|+|
T Consensus 108 e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH 151 (362)
T 2bdw_A 108 DLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVH 151 (362)
T ss_dssp CCCCSCBHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHTTCBC
T ss_pred ecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEe
Confidence 99999999999975432 3578899999988
No 188
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=99.32 E-value=2.5e-12 Score=137.27 Aligned_cols=106 Identities=21% Similarity=0.358 Sum_probs=90.4
Q ss_pred cCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcCh------hcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEE
Q 004275 659 NNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKSK------QGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLL 731 (764)
Q Consensus 659 ~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~------~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 731 (764)
+.|...+.||+|+||.||+|.. .+|+.||||.+..... ...+++.+|++++.+++|||||++++++...+..+
T Consensus 11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 90 (326)
T 2y0a_A 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI 90 (326)
T ss_dssp HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 4488889999999999999995 4689999999865321 13578999999999999999999999999999999
Q ss_pred EEEcccCCCcHHHHHhcCCC--------------CCCCHHHHccccC
Q 004275 732 LVYEYLENNSLARALFGNAI--------------TKITYTFSLHLWN 764 (764)
Q Consensus 732 lv~Ey~~~GsL~~~L~~~~~--------------~~l~~~~~~~i~h 764 (764)
+||||+++|+|.+++..... .++.+.|..+|+|
T Consensus 91 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH 137 (326)
T 2y0a_A 91 LILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAH 137 (326)
T ss_dssp EEEECCCSCBHHHHHTTSSCCBHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred EEEEcCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHCCeEc
Confidence 99999999999999975432 3577888888888
No 189
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=99.32 E-value=7.3e-13 Score=143.17 Aligned_cols=101 Identities=21% Similarity=0.443 Sum_probs=84.2
Q ss_pred ccHHHHHHhhcCccccCeeeccCCeeEEEEEE------cCCCEEEEEEcCCcC-hhcHHHHHHHHHHHHhC-CCCCccce
Q 004275 649 FTLRQIKAATNNFDAANKIGEGGFGPVYKGTL------SDGAVIAVKQLSSKS-KQGNREFVNEIGMISAL-QHQNLVKL 720 (764)
Q Consensus 649 ~~~~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~------~~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l-~H~niv~l 720 (764)
+...++....++|...+.||+|+||.||+|+. .+++.||||++.... ....+.|.+|++++.++ +|||||++
T Consensus 12 ~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~ 91 (359)
T 3vhe_A 12 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 91 (359)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeee
Confidence 34455556678899999999999999999974 245789999997643 33456799999999999 79999999
Q ss_pred EEEEEECCE-EEEEEcccCCCcHHHHHhcC
Q 004275 721 YGCCIEGNQ-LLLVYEYLENNSLARALFGN 749 (764)
Q Consensus 721 ~g~~~~~~~-~~lv~Ey~~~GsL~~~L~~~ 749 (764)
+++|...+. .++||||+++|+|.++++..
T Consensus 92 ~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~ 121 (359)
T 3vhe_A 92 LGACTKPGGPLMVIVEFCKFGNLSTYLRSK 121 (359)
T ss_dssp EEEECSTTSCCEEEEECCTTEEHHHHHHTT
T ss_pred eeeeecCCCceEEEEEecCCCcHHHHHHhc
Confidence 999987554 89999999999999999864
No 190
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=99.32 E-value=2.4e-12 Score=140.58 Aligned_cols=107 Identities=19% Similarity=0.345 Sum_probs=92.9
Q ss_pred hcCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcChhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEEcc
Q 004275 658 TNNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKSKQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVYEY 736 (764)
Q Consensus 658 ~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 736 (764)
.+.|+..+.||+|+||.||+|.. .+|+.||+|.+..........+.+|++++.+++|||||++++++...+..++||||
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~ 129 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF 129 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence 35688999999999999999985 47889999999776555566899999999999999999999999999999999999
Q ss_pred cCCCcHHHHHhcCCC---------------CCCCHHHHccccC
Q 004275 737 LENNSLARALFGNAI---------------TKITYTFSLHLWN 764 (764)
Q Consensus 737 ~~~GsL~~~L~~~~~---------------~~l~~~~~~~i~h 764 (764)
|++|+|.+++..... .++.+.|..+|+|
T Consensus 130 ~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH 172 (387)
T 1kob_A 130 LSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVH 172 (387)
T ss_dssp CCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred CCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCeee
Confidence 999999999975431 2477888888887
No 191
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=99.31 E-value=3e-12 Score=135.71 Aligned_cols=106 Identities=17% Similarity=0.282 Sum_probs=90.1
Q ss_pred cCccc-cCeeeccCCeeEEEEE-EcCCCEEEEEEcCCcChhcHHHHHHHHHHHHhC-CCCCccceEEEEEECCEEEEEEc
Q 004275 659 NNFDA-ANKIGEGGFGPVYKGT-LSDGAVIAVKQLSSKSKQGNREFVNEIGMISAL-QHQNLVKLYGCCIEGNQLLLVYE 735 (764)
Q Consensus 659 ~~~~~-~~~iG~G~~g~Vy~~~-~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~E 735 (764)
+.|.. .+.||+|+||.||+|. ..+++.||||++........+.+.+|++++.++ +|||||++++++...+..++|||
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e 91 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFE 91 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEE
Confidence 34655 4789999999999998 457899999999765555567899999999984 79999999999999999999999
Q ss_pred ccCCCcHHHHHhcCCC--------------CCCCHHHHccccC
Q 004275 736 YLENNSLARALFGNAI--------------TKITYTFSLHLWN 764 (764)
Q Consensus 736 y~~~GsL~~~L~~~~~--------------~~l~~~~~~~i~h 764 (764)
|+++|+|.+++..... .++.+.|..+|+|
T Consensus 92 ~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH 134 (316)
T 2ac3_A 92 KMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAH 134 (316)
T ss_dssp CCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred cCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcee
Confidence 9999999999975321 3578889999988
No 192
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=99.31 E-value=2e-12 Score=134.73 Aligned_cols=106 Identities=25% Similarity=0.458 Sum_probs=88.5
Q ss_pred hcCccccCeeeccCCeeEEEEEEcCCCEEEEEEcCCcChhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEEccc
Q 004275 658 TNNFDAANKIGEGGFGPVYKGTLSDGAVIAVKQLSSKSKQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVYEYL 737 (764)
Q Consensus 658 ~~~~~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~ 737 (764)
.++|+..+.||+|+||.||+|...++..||||++..... ..++|.+|++++.+++|+||+++++++...+..++||||+
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 101 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM 101 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCC
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEecc
Confidence 355888899999999999999988888999999976432 3467999999999999999999999999989999999999
Q ss_pred CCCcHHHHHhcCCC---------------CCCCHHHHccccC
Q 004275 738 ENNSLARALFGNAI---------------TKITYTFSLHLWN 764 (764)
Q Consensus 738 ~~GsL~~~L~~~~~---------------~~l~~~~~~~i~h 764 (764)
++|+|.+++..... .++.+.|..+|+|
T Consensus 102 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H 143 (283)
T 3gen_A 102 ANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLH 143 (283)
T ss_dssp TTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred CCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCccC
Confidence 99999999976221 3577888888887
No 193
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=99.31 E-value=1.5e-12 Score=134.65 Aligned_cols=106 Identities=26% Similarity=0.426 Sum_probs=90.7
Q ss_pred hcCccccCeeeccCCeeEEEEEEcCCCEEEEEEcCCcChhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEEccc
Q 004275 658 TNNFDAANKIGEGGFGPVYKGTLSDGAVIAVKQLSSKSKQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVYEYL 737 (764)
Q Consensus 658 ~~~~~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~ 737 (764)
.++|...+.||+|+||.||+|...++..||||.+..... ..+++.+|++++.+++||||+++++++...+..++||||+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYI 85 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEcc
Confidence 356888899999999999999988888999999975432 3467999999999999999999999999888999999999
Q ss_pred CCCcHHHHHhcCCC---------------CCCCHHHHccccC
Q 004275 738 ENNSLARALFGNAI---------------TKITYTFSLHLWN 764 (764)
Q Consensus 738 ~~GsL~~~L~~~~~---------------~~l~~~~~~~i~h 764 (764)
++|+|.+++..... .++.+.|..+|+|
T Consensus 86 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H 127 (268)
T 3sxs_A 86 SNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIH 127 (268)
T ss_dssp TTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEEE
T ss_pred CCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 99999999975321 3467778888777
No 194
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=99.31 E-value=3.1e-12 Score=137.25 Aligned_cols=93 Identities=29% Similarity=0.550 Sum_probs=81.2
Q ss_pred hhcCccccCeeeccCCeeEEEEEEc------CCCEEEEEEcCCcC-hhcHHHHHHHHHHHHhCCCCCccceEEEEEECCE
Q 004275 657 ATNNFDAANKIGEGGFGPVYKGTLS------DGAVIAVKQLSSKS-KQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQ 729 (764)
Q Consensus 657 ~~~~~~~~~~iG~G~~g~Vy~~~~~------~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~ 729 (764)
..++|...+.||+|+||.||+|+.. +++.||||.+.... ....+.|.+|++++.+++||||+++++++...+.
T Consensus 45 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 124 (343)
T 1luf_A 45 PRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKP 124 (343)
T ss_dssp CGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS
T ss_pred cHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCc
Confidence 4567888999999999999999964 34789999997643 3345689999999999999999999999999999
Q ss_pred EEEEEcccCCCcHHHHHhcC
Q 004275 730 LLLVYEYLENNSLARALFGN 749 (764)
Q Consensus 730 ~~lv~Ey~~~GsL~~~L~~~ 749 (764)
.++||||+++|+|.+++...
T Consensus 125 ~~lv~e~~~~~~L~~~l~~~ 144 (343)
T 1luf_A 125 MCLLFEYMAYGDLNEFLRSM 144 (343)
T ss_dssp CEEEEECCTTCBHHHHHHHT
T ss_pred eEEEEecCCCCcHHHHHHHh
Confidence 99999999999999999763
No 195
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=99.31 E-value=1.8e-12 Score=138.43 Aligned_cols=107 Identities=21% Similarity=0.349 Sum_probs=86.0
Q ss_pred hcCccccCeeeccCCeeEEEEEE----cCCCEEEEEEcCCcC----hhcHHHHHHHHHHHHhCCCCCccceEEEEEECCE
Q 004275 658 TNNFDAANKIGEGGFGPVYKGTL----SDGAVIAVKQLSSKS----KQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQ 729 (764)
Q Consensus 658 ~~~~~~~~~iG~G~~g~Vy~~~~----~~g~~vAvK~l~~~~----~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~ 729 (764)
.++|+..+.||+|+||.||+++. .+|+.||||++.... ......+.+|++++.+++|||||++++++...+.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 35688899999999999999986 578999999997642 2234568899999999999999999999999999
Q ss_pred EEEEEcccCCCcHHHHHhcCCC--------------CCCCHHHHccccC
Q 004275 730 LLLVYEYLENNSLARALFGNAI--------------TKITYTFSLHLWN 764 (764)
Q Consensus 730 ~~lv~Ey~~~GsL~~~L~~~~~--------------~~l~~~~~~~i~h 764 (764)
.++||||+++|+|.+++..... .++.+.|..+|+|
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH 144 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIY 144 (327)
T ss_dssp EEEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred EEEEEeCCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEEc
Confidence 9999999999999999975321 3578899999998
No 196
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=99.31 E-value=1.4e-12 Score=145.79 Aligned_cols=108 Identities=22% Similarity=0.390 Sum_probs=92.3
Q ss_pred HHhhcCccccCeeeccCCeeEEEEEEcCCCEEEEEEcCCcChhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEE
Q 004275 655 KAATNNFDAANKIGEGGFGPVYKGTLSDGAVIAVKQLSSKSKQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVY 734 (764)
Q Consensus 655 ~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 734 (764)
+...++|...+.||+|+||.||+|...++..||||++.... ...++|.+|+++|++++|||||++++++. .+..++||
T Consensus 184 ~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~ 261 (454)
T 1qcf_A 184 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIIT 261 (454)
T ss_dssp BCCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEE
T ss_pred eechHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEE
Confidence 34456788899999999999999999888899999997643 34678999999999999999999999986 66789999
Q ss_pred cccCCCcHHHHHhcCC----------------CCCCCHHHHccccC
Q 004275 735 EYLENNSLARALFGNA----------------ITKITYTFSLHLWN 764 (764)
Q Consensus 735 Ey~~~GsL~~~L~~~~----------------~~~l~~~~~~~i~h 764 (764)
|||++|+|.++++... ..++.|.|..+|+|
T Consensus 262 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH 307 (454)
T 1qcf_A 262 EFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIH 307 (454)
T ss_dssp CCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred eecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCccC
Confidence 9999999999997431 13578888889888
No 197
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=99.31 E-value=1.3e-12 Score=138.32 Aligned_cols=108 Identities=28% Similarity=0.470 Sum_probs=91.2
Q ss_pred HhhcCccccCeeeccCCeeEEEEEEcCCCEEEEEEcCCcC--hhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEE
Q 004275 656 AATNNFDAANKIGEGGFGPVYKGTLSDGAVIAVKQLSSKS--KQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLV 733 (764)
Q Consensus 656 ~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv 733 (764)
....+|+..+.||+|+||.||+|+. +|+.||||.+.... ....++|.+|++++++++|||||++++++...+..++|
T Consensus 34 i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 3p86_A 34 IPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIV 112 (309)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEE
T ss_pred CChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEE
Confidence 3456688899999999999999986 68899999997543 33456899999999999999999999999999999999
Q ss_pred EcccCCCcHHHHHhcCCC-----------------CCCCHHHHcc--ccC
Q 004275 734 YEYLENNSLARALFGNAI-----------------TKITYTFSLH--LWN 764 (764)
Q Consensus 734 ~Ey~~~GsL~~~L~~~~~-----------------~~l~~~~~~~--i~h 764 (764)
|||+++|+|.+++..... .++.|.|..+ |+|
T Consensus 113 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH 162 (309)
T 3p86_A 113 TEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVH 162 (309)
T ss_dssp EECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCC
T ss_pred EecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEEC
Confidence 999999999999986431 2467777777 877
No 198
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=99.31 E-value=1.9e-12 Score=134.55 Aligned_cols=107 Identities=21% Similarity=0.374 Sum_probs=91.8
Q ss_pred hcCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcChhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEEcc
Q 004275 658 TNNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKSKQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVYEY 736 (764)
Q Consensus 658 ~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 736 (764)
.+.|...+.||+|+||.||+|+. .++..||+|++........+.+.+|++++.+++||||+++++++...+..++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMEL 87 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEec
Confidence 34588899999999999999995 45778999999765555567899999999999999999999999999999999999
Q ss_pred cCCCcHHHHHhcCCC--------------CCCCHHHHccccC
Q 004275 737 LENNSLARALFGNAI--------------TKITYTFSLHLWN 764 (764)
Q Consensus 737 ~~~GsL~~~L~~~~~--------------~~l~~~~~~~i~h 764 (764)
+++|+|.+++..... .++.+.|..+|+|
T Consensus 88 ~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H 129 (277)
T 3f3z_A 88 CTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAH 129 (277)
T ss_dssp CCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred cCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccC
Confidence 999999999865432 3577888888887
No 199
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=99.30 E-value=2.5e-12 Score=139.26 Aligned_cols=106 Identities=20% Similarity=0.340 Sum_probs=91.4
Q ss_pred hcCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcChhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEEcc
Q 004275 658 TNNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKSKQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVYEY 736 (764)
Q Consensus 658 ~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 736 (764)
.++|...+.||+|+||.||+++. .+++.||||++..... ..+.+.+|++++++++|||||++++++...+..++||||
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 97 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEY 97 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEe
Confidence 45688899999999999999995 4789999999965432 235789999999999999999999999999999999999
Q ss_pred cCCCcHHHHHhcCCC--------------CCCCHHHHccccC
Q 004275 737 LENNSLARALFGNAI--------------TKITYTFSLHLWN 764 (764)
Q Consensus 737 ~~~GsL~~~L~~~~~--------------~~l~~~~~~~i~h 764 (764)
+++|+|.+++..... .++.|.|..+|+|
T Consensus 98 ~~~~~L~~~l~~~~~~~~~~~~~i~~ql~~~L~~LH~~~ivH 139 (361)
T 3uc3_A 98 ASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICH 139 (361)
T ss_dssp CCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCS
T ss_pred CCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 999999999865321 3588999999998
No 200
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=99.30 E-value=1.9e-12 Score=137.67 Aligned_cols=106 Identities=21% Similarity=0.348 Sum_probs=90.9
Q ss_pred cCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcC---hhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEE
Q 004275 659 NNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKS---KQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVY 734 (764)
Q Consensus 659 ~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 734 (764)
++|+..+.||+|+||.||+++. .+|+.||+|++.... ....+.+.+|+.+++.++|||||++++++.+.+..++||
T Consensus 6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~ 85 (318)
T 1fot_A 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM 85 (318)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEE
Confidence 5688899999999999999995 478999999996532 223567889999999999999999999999999999999
Q ss_pred cccCCCcHHHHHhcCCC--------------CCCCHHHHccccC
Q 004275 735 EYLENNSLARALFGNAI--------------TKITYTFSLHLWN 764 (764)
Q Consensus 735 Ey~~~GsL~~~L~~~~~--------------~~l~~~~~~~i~h 764 (764)
||+++|+|.+++..... .++.+.|..+|+|
T Consensus 86 e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH 129 (318)
T 1fot_A 86 DYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIY 129 (318)
T ss_dssp CCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEEC
T ss_pred eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 99999999999976431 3578888888888
No 201
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=99.30 E-value=1.5e-12 Score=140.52 Aligned_cols=106 Identities=19% Similarity=0.366 Sum_probs=89.1
Q ss_pred cCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcC-----hhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEE
Q 004275 659 NNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKS-----KQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLL 732 (764)
Q Consensus 659 ~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~-----~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 732 (764)
+.|...+.||+|+||.||+|.. .+|+.||||.+.... ....+.+.+|++++.+++|||||++++++...+..++
T Consensus 24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l 103 (351)
T 3c0i_A 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYM 103 (351)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 3488889999999999999985 578999999985421 1235789999999999999999999999999999999
Q ss_pred EEcccCCCcHHHHHhcCC------------------CCCCCHHHHccccC
Q 004275 733 VYEYLENNSLARALFGNA------------------ITKITYTFSLHLWN 764 (764)
Q Consensus 733 v~Ey~~~GsL~~~L~~~~------------------~~~l~~~~~~~i~h 764 (764)
|||||++|+|.+++.... ..++.|.|..+|+|
T Consensus 104 v~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH 153 (351)
T 3c0i_A 104 VFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIH 153 (351)
T ss_dssp EEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred EEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCcee
Confidence 999999999988885321 13578888888888
No 202
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=99.30 E-value=2.5e-12 Score=138.64 Aligned_cols=105 Identities=20% Similarity=0.321 Sum_probs=84.2
Q ss_pred hcCccccCeeeccCCeeEEEEEEc-CCCEEEEEEcCCcChhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEEcc
Q 004275 658 TNNFDAANKIGEGGFGPVYKGTLS-DGAVIAVKQLSSKSKQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVYEY 736 (764)
Q Consensus 658 ~~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 736 (764)
.+.|...+.||+|+||.||+|+.. +++.||||++.... ..+.+.+|++++.+++|||||++++++...+..++||||
T Consensus 52 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 129 (349)
T 2w4o_A 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLEL 129 (349)
T ss_dssp GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred cCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEe
Confidence 456888999999999999999964 67899999997542 345788999999999999999999999999999999999
Q ss_pred cCCCcHHHHHhcCCC--------------CCCCHHHHccccC
Q 004275 737 LENNSLARALFGNAI--------------TKITYTFSLHLWN 764 (764)
Q Consensus 737 ~~~GsL~~~L~~~~~--------------~~l~~~~~~~i~h 764 (764)
+++|+|.+++..... .++.+.|..+|+|
T Consensus 130 ~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH 171 (349)
T 2w4o_A 130 VTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVH 171 (349)
T ss_dssp CCSCBHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred CCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEe
Confidence 999999999976432 2577888888888
No 203
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=99.30 E-value=2.4e-12 Score=138.92 Aligned_cols=107 Identities=21% Similarity=0.366 Sum_probs=91.0
Q ss_pred hcCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCc---ChhcHHHHHHHHHHHHhC-CCCCccceEEEEEECCEEEE
Q 004275 658 TNNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSK---SKQGNREFVNEIGMISAL-QHQNLVKLYGCCIEGNQLLL 732 (764)
Q Consensus 658 ~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~l 732 (764)
.++|+..+.||+|+||.||+|+. .+|+.||||++... .....+.+.+|.+++..+ +|||||++++++.+.+..++
T Consensus 22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 101 (353)
T 3txo_A 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFF 101 (353)
T ss_dssp -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEE
Confidence 46799999999999999999995 56899999999653 222346788999999988 69999999999999999999
Q ss_pred EEcccCCCcHHHHHhcCCC--------------CCCCHHHHccccC
Q 004275 733 VYEYLENNSLARALFGNAI--------------TKITYTFSLHLWN 764 (764)
Q Consensus 733 v~Ey~~~GsL~~~L~~~~~--------------~~l~~~~~~~i~h 764 (764)
|||||++|+|.+++..... .+|.|.|..+|+|
T Consensus 102 v~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givH 147 (353)
T 3txo_A 102 VMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIY 147 (353)
T ss_dssp EEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBC
T ss_pred EEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCcc
Confidence 9999999999999975321 3588999999998
No 204
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=99.29 E-value=1.7e-12 Score=140.88 Aligned_cols=106 Identities=27% Similarity=0.420 Sum_probs=89.0
Q ss_pred cCccccCeeeccCCeeEEEEEEc------CCCEEEEEEcCCc-ChhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEE
Q 004275 659 NNFDAANKIGEGGFGPVYKGTLS------DGAVIAVKQLSSK-SKQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLL 731 (764)
Q Consensus 659 ~~~~~~~~iG~G~~g~Vy~~~~~------~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 731 (764)
++|...+.||+|+||.||+|+.. +++.||||++... ......+|.+|++++++++|||||++++++...+..+
T Consensus 71 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 150 (367)
T 3l9p_A 71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRF 150 (367)
T ss_dssp GGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred hHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCE
Confidence 45888899999999999999853 4568999999754 3344567999999999999999999999999988999
Q ss_pred EEEcccCCCcHHHHHhcCCC---------------------CCCCHHHHccccC
Q 004275 732 LVYEYLENNSLARALFGNAI---------------------TKITYTFSLHLWN 764 (764)
Q Consensus 732 lv~Ey~~~GsL~~~L~~~~~---------------------~~l~~~~~~~i~h 764 (764)
+|||||++|+|.+++..... .++.|.|..+|+|
T Consensus 151 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH 204 (367)
T 3l9p_A 151 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIH 204 (367)
T ss_dssp EEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred EEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeC
Confidence 99999999999999975321 2356778888887
No 205
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=99.29 E-value=1.1e-12 Score=141.02 Aligned_cols=93 Identities=20% Similarity=0.348 Sum_probs=80.5
Q ss_pred HHhhcCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCc-----ChhcHHHHHHHHHHHHhCCCCCccceEEEEEECC
Q 004275 655 KAATNNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSK-----SKQGNREFVNEIGMISALQHQNLVKLYGCCIEGN 728 (764)
Q Consensus 655 ~~~~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~-----~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~ 728 (764)
....+.|...+.||+|+||.||+|+. .+++.||||++... .....+.+.+|++++++++|||||++++++.+.+
T Consensus 22 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~ 101 (345)
T 3hko_A 22 LELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQ 101 (345)
T ss_dssp HHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred hhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCC
Confidence 34556699999999999999999985 57889999998643 2234568999999999999999999999999999
Q ss_pred EEEEEEcccCCCcHHHHHh
Q 004275 729 QLLLVYEYLENNSLARALF 747 (764)
Q Consensus 729 ~~~lv~Ey~~~GsL~~~L~ 747 (764)
..++||||+++|+|.+++.
T Consensus 102 ~~~lv~e~~~gg~L~~~l~ 120 (345)
T 3hko_A 102 YICLVMELCHGGHLLDKLN 120 (345)
T ss_dssp EEEEEEECCCSCBHHHHEE
T ss_pred eEEEEEeCCCCCcHHHHHH
Confidence 9999999999999999884
No 206
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=99.29 E-value=2e-12 Score=137.86 Aligned_cols=107 Identities=25% Similarity=0.384 Sum_probs=88.6
Q ss_pred hcCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcCh-hcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEEc
Q 004275 658 TNNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKSK-QGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVYE 735 (764)
Q Consensus 658 ~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E 735 (764)
.++|+..+.||+|+||.||+|+. .+++.||||.+..... ...+.+.+|++++++++|||||++++++...+..++|||
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 85 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence 35788999999999999999995 4789999999965332 234578999999999999999999999999999999999
Q ss_pred ccCCCcHHHHHhcCCC--------------CCCCHHHHccccC
Q 004275 736 YLENNSLARALFGNAI--------------TKITYTFSLHLWN 764 (764)
Q Consensus 736 y~~~GsL~~~L~~~~~--------------~~l~~~~~~~i~h 764 (764)
|+++|+|.+++..... .++.|.|..+|+|
T Consensus 86 ~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~givH 128 (323)
T 3tki_A 86 YCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITH 128 (323)
T ss_dssp CCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred cCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 9999999998875421 3577888888887
No 207
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.29 E-value=4.7e-12 Score=130.59 Aligned_cols=105 Identities=26% Similarity=0.457 Sum_probs=90.8
Q ss_pred cCccccCeeeccCCeeEEEEEEcCCCEEEEEEcCCcChhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEEcccC
Q 004275 659 NNFDAANKIGEGGFGPVYKGTLSDGAVIAVKQLSSKSKQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVYEYLE 738 (764)
Q Consensus 659 ~~~~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~ 738 (764)
++|...+.||+|+||.||+|...+++.||||.+..... ..+++.+|++++.+++||||+++++++...+..++||||++
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 86 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFME 86 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCT
T ss_pred hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCC
Confidence 45788899999999999999988888999999976432 34689999999999999999999999999899999999999
Q ss_pred CCcHHHHHhcCCC---------------CCCCHHHHccccC
Q 004275 739 NNSLARALFGNAI---------------TKITYTFSLHLWN 764 (764)
Q Consensus 739 ~GsL~~~L~~~~~---------------~~l~~~~~~~i~h 764 (764)
+|+|.+++..... .++.+.|..+|+|
T Consensus 87 ~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H 127 (267)
T 3t9t_A 87 HGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIH 127 (267)
T ss_dssp TCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred CCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 9999999976431 2467788888887
No 208
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=99.28 E-value=3.6e-12 Score=137.16 Aligned_cols=106 Identities=20% Similarity=0.281 Sum_probs=90.2
Q ss_pred cCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcC---hhcHHHHHHHHHHHHhC-CCCCccceEEEEEECCEEEEE
Q 004275 659 NNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKS---KQGNREFVNEIGMISAL-QHQNLVKLYGCCIEGNQLLLV 733 (764)
Q Consensus 659 ~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv 733 (764)
++|...+.||+|+||.||+|+. .+++.||||++.... ....+.+.+|.+++.++ +|||||++++++.+.+..++|
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv 88 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 88 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence 4588899999999999999996 468899999997532 23346688999999987 899999999999999999999
Q ss_pred EcccCCCcHHHHHhcCCC--------------CCCCHHHHccccC
Q 004275 734 YEYLENNSLARALFGNAI--------------TKITYTFSLHLWN 764 (764)
Q Consensus 734 ~Ey~~~GsL~~~L~~~~~--------------~~l~~~~~~~i~h 764 (764)
|||+++|+|.+++..... .++.+.|..+|+|
T Consensus 89 ~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH 133 (345)
T 3a8x_A 89 IEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIY 133 (345)
T ss_dssp ECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBC
T ss_pred EeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcee
Confidence 999999999999975321 3588899999998
No 209
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=99.28 E-value=2.7e-12 Score=139.95 Aligned_cols=106 Identities=21% Similarity=0.362 Sum_probs=91.3
Q ss_pred cCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcC---hhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEE
Q 004275 659 NNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKS---KQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVY 734 (764)
Q Consensus 659 ~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 734 (764)
++|...+.||+|+||.||++.. .+++.||+|.+.... ....+.+.+|++++.+++|||||++++++.+.+..++||
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~ 94 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV 94 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 4588899999999999999995 568899999996532 224567899999999999999999999999999999999
Q ss_pred cccCCCcHHHHHhcCCC--------------CCCCHHHHccccC
Q 004275 735 EYLENNSLARALFGNAI--------------TKITYTFSLHLWN 764 (764)
Q Consensus 735 Ey~~~GsL~~~L~~~~~--------------~~l~~~~~~~i~h 764 (764)
||+++|+|.+++..... .++.|.|..+|+|
T Consensus 95 e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givH 138 (384)
T 4fr4_A 95 DLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRIIH 138 (384)
T ss_dssp CCCTTEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred ecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcee
Confidence 99999999999986532 3578889999988
No 210
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=99.28 E-value=4.8e-12 Score=134.47 Aligned_cols=106 Identities=20% Similarity=0.273 Sum_probs=88.4
Q ss_pred cCccccCeeeccCCeeEEEEEEc-CCCEEEEEEcCCcC-hhcHHHHHHHHHHHHhCCCCCccceEEEEEECC--EEEEEE
Q 004275 659 NNFDAANKIGEGGFGPVYKGTLS-DGAVIAVKQLSSKS-KQGNREFVNEIGMISALQHQNLVKLYGCCIEGN--QLLLVY 734 (764)
Q Consensus 659 ~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~--~~~lv~ 734 (764)
+.|...+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|++++++++|||||++++++...+ ..++||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEE
Confidence 45788899999999999999964 58999999997543 234577899999999999999999999998765 679999
Q ss_pred cccCCCcHHHHHhcCCC-----------------CCCCHHHHccccC
Q 004275 735 EYLENNSLARALFGNAI-----------------TKITYTFSLHLWN 764 (764)
Q Consensus 735 Ey~~~GsL~~~L~~~~~-----------------~~l~~~~~~~i~h 764 (764)
||+++|+|.+++..... .++.+.|..+|+|
T Consensus 89 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH 135 (319)
T 4euu_A 89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVH 135 (319)
T ss_dssp ECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred eCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEec
Confidence 99999999999976421 2467778888877
No 211
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=99.28 E-value=3.8e-12 Score=141.61 Aligned_cols=107 Identities=16% Similarity=0.305 Sum_probs=90.3
Q ss_pred hcCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcC--hhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEE
Q 004275 658 TNNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKS--KQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVY 734 (764)
Q Consensus 658 ~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 734 (764)
.+.|+..+.||+|+||.||+|.. .+|+.||+|.+.... ....+.+.+|++++++++|||||++++++.+.+..++||
T Consensus 10 ~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~ 89 (444)
T 3soa_A 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIF 89 (444)
T ss_dssp HHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEE
T ss_pred cCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEE
Confidence 45688899999999999999984 578899999996543 233567999999999999999999999999999999999
Q ss_pred cccCCCcHHHHHhcCCC--------------CCCCHHHHccccC
Q 004275 735 EYLENNSLARALFGNAI--------------TKITYTFSLHLWN 764 (764)
Q Consensus 735 Ey~~~GsL~~~L~~~~~--------------~~l~~~~~~~i~h 764 (764)
|||++|+|.+++..... .++.|.|..+|+|
T Consensus 90 E~~~gg~L~~~i~~~~~~~e~~~~~i~~qil~aL~~lH~~givH 133 (444)
T 3soa_A 90 DLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVH 133 (444)
T ss_dssp CCCBCCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTCBC
T ss_pred EeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 99999999999976532 3578899999998
No 212
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=99.28 E-value=4e-12 Score=134.07 Aligned_cols=106 Identities=18% Similarity=0.329 Sum_probs=88.4
Q ss_pred cCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcChhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEEccc
Q 004275 659 NNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKSKQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVYEYL 737 (764)
Q Consensus 659 ~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~ 737 (764)
+.|...+.||+|+||.||+++. .+|+.||||.+........+.+.+|++++.+++||||+++++++...+..++||||+
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 88 (304)
T 2jam_A 9 KTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLV 88 (304)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred ccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEcC
Confidence 4588899999999999999995 478999999997654444567999999999999999999999999999999999999
Q ss_pred CCCcHHHHHhcCCC--------------CCCCHHHHccccC
Q 004275 738 ENNSLARALFGNAI--------------TKITYTFSLHLWN 764 (764)
Q Consensus 738 ~~GsL~~~L~~~~~--------------~~l~~~~~~~i~h 764 (764)
++|+|.+++..... .++.+.|..+|+|
T Consensus 89 ~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H 129 (304)
T 2jam_A 89 SGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVH 129 (304)
T ss_dssp CSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred CCccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 99999999864321 3578888888888
No 213
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=99.28 E-value=9.4e-12 Score=130.33 Aligned_cols=104 Identities=22% Similarity=0.344 Sum_probs=86.8
Q ss_pred ccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcChhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEEcccCC
Q 004275 661 FDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKSKQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVYEYLEN 739 (764)
Q Consensus 661 ~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~ 739 (764)
+....+||+|+||.||+|.. .+++.||||.+........+.+.+|++++.+++|||||++++++...+..++||||+++
T Consensus 24 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 103 (295)
T 2clq_A 24 NGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPG 103 (295)
T ss_dssp TSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSE
T ss_pred CCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCC
Confidence 45556999999999999994 57889999999765555567899999999999999999999999999999999999999
Q ss_pred CcHHHHHhcCCC-----------------CCCCHHHHccccC
Q 004275 740 NSLARALFGNAI-----------------TKITYTFSLHLWN 764 (764)
Q Consensus 740 GsL~~~L~~~~~-----------------~~l~~~~~~~i~h 764 (764)
|+|.+++..... .++.+.|..+|+|
T Consensus 104 ~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H 145 (295)
T 2clq_A 104 GSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVH 145 (295)
T ss_dssp EEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred CCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCEEc
Confidence 999999975421 2366777777777
No 214
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=99.27 E-value=5.4e-12 Score=134.25 Aligned_cols=106 Identities=19% Similarity=0.318 Sum_probs=90.7
Q ss_pred cCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcCh------hcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEE
Q 004275 659 NNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKSK------QGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLL 731 (764)
Q Consensus 659 ~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~------~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 731 (764)
+.|...+.||+|+||.||+|+. .+|+.||||.+..... ...+++.+|++++.+++||||+++++++...+..+
T Consensus 12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 91 (321)
T 2a2a_A 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVV 91 (321)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred ccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEE
Confidence 4588899999999999999995 4689999999865321 13578999999999999999999999999999999
Q ss_pred EEEcccCCCcHHHHHhcCCC--------------CCCCHHHHccccC
Q 004275 732 LVYEYLENNSLARALFGNAI--------------TKITYTFSLHLWN 764 (764)
Q Consensus 732 lv~Ey~~~GsL~~~L~~~~~--------------~~l~~~~~~~i~h 764 (764)
+||||+++|+|.+++..... .++.+.|..+|+|
T Consensus 92 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivH 138 (321)
T 2a2a_A 92 LILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAH 138 (321)
T ss_dssp EEECCCCSCBHHHHHHTCSCEEHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred EEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 99999999999999976431 3578888888888
No 215
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=99.27 E-value=3.9e-12 Score=134.47 Aligned_cols=92 Identities=28% Similarity=0.479 Sum_probs=80.4
Q ss_pred hcCccccCeeeccCCeeEEEEEE------cCCCEEEEEEcCCcCh-hcHHHHHHHHHHHHhC-CCCCccceEEEEEECCE
Q 004275 658 TNNFDAANKIGEGGFGPVYKGTL------SDGAVIAVKQLSSKSK-QGNREFVNEIGMISAL-QHQNLVKLYGCCIEGNQ 729 (764)
Q Consensus 658 ~~~~~~~~~iG~G~~g~Vy~~~~------~~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~ 729 (764)
.++|...+.||+|+||.||+|+. .+++.||||.+..... ...+.+.+|++++.++ +||||+++++++...+.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~ 101 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP 101 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCC
Confidence 45688899999999999999984 3567899999975433 3457899999999999 89999999999999999
Q ss_pred EEEEEcccCCCcHHHHHhcC
Q 004275 730 LLLVYEYLENNSLARALFGN 749 (764)
Q Consensus 730 ~~lv~Ey~~~GsL~~~L~~~ 749 (764)
.++||||+++|+|.+++...
T Consensus 102 ~~lv~e~~~~~~L~~~l~~~ 121 (313)
T 1t46_A 102 TLVITEYCCYGDLLNFLRRK 121 (313)
T ss_dssp CEEEEECCTTEEHHHHHHHT
T ss_pred cEEEEecCCCCCHHHHHHhc
Confidence 99999999999999999764
No 216
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=99.27 E-value=3.3e-12 Score=131.89 Aligned_cols=92 Identities=23% Similarity=0.399 Sum_probs=80.0
Q ss_pred cCccccCeeeccCCeeEEEEEEcCCCEEEEEEcCCcC--hhcHHHHHHHHHHHHhCCCCCccceEEEEEEC--CEEEEEE
Q 004275 659 NNFDAANKIGEGGFGPVYKGTLSDGAVIAVKQLSSKS--KQGNREFVNEIGMISALQHQNLVKLYGCCIEG--NQLLLVY 734 (764)
Q Consensus 659 ~~~~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--~~~~lv~ 734 (764)
++|...+.||+|+||.||+|+.. ++.||||.+.... ....++|.+|++++++++|||||++++++... +..++||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (271)
T 3kmu_A 10 KQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLIT 88 (271)
T ss_dssp GGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEE
T ss_pred HHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeee
Confidence 45788899999999999999974 8899999997542 33456899999999999999999999999876 6789999
Q ss_pred cccCCCcHHHHHhcCCC
Q 004275 735 EYLENNSLARALFGNAI 751 (764)
Q Consensus 735 Ey~~~GsL~~~L~~~~~ 751 (764)
||+++|+|.++++....
T Consensus 89 e~~~~~~L~~~l~~~~~ 105 (271)
T 3kmu_A 89 HWMPYGSLYNVLHEGTN 105 (271)
T ss_dssp ECCTTCBHHHHHHSCSS
T ss_pred cccCCCcHHHHHhhccc
Confidence 99999999999987643
No 217
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=99.27 E-value=5.9e-12 Score=133.34 Aligned_cols=106 Identities=25% Similarity=0.456 Sum_probs=88.6
Q ss_pred hcCccccCeeeccCCeeEEEEEEcCCCEEEEEEcCCcCh--hcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEEc
Q 004275 658 TNNFDAANKIGEGGFGPVYKGTLSDGAVIAVKQLSSKSK--QGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVYE 735 (764)
Q Consensus 658 ~~~~~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E 735 (764)
.++|+..+.||+|+||.||+|+..+|+.||||++..... ...+.+.+|++++++++|||||++++++.+.+..++|||
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 99 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFE 99 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEE
T ss_pred HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEc
Confidence 466888999999999999999988899999999965422 224678999999999999999999999999999999999
Q ss_pred ccCCCcHHHHHhcCCC---------------CCCCHHHHccccC
Q 004275 736 YLENNSLARALFGNAI---------------TKITYTFSLHLWN 764 (764)
Q Consensus 736 y~~~GsL~~~L~~~~~---------------~~l~~~~~~~i~h 764 (764)
||++ +|.+++..... .++.+.|..+|+|
T Consensus 100 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH 142 (311)
T 3niz_A 100 FMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILH 142 (311)
T ss_dssp CCSE-EHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred CCCC-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 9995 88888875432 2577888888887
No 218
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=99.27 E-value=5.4e-12 Score=142.63 Aligned_cols=107 Identities=23% Similarity=0.452 Sum_probs=91.1
Q ss_pred hhcCccccCeeeccCCeeEEEEEEc-CCCEEEEEEcCCcChhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEEc
Q 004275 657 ATNNFDAANKIGEGGFGPVYKGTLS-DGAVIAVKQLSSKSKQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVYE 735 (764)
Q Consensus 657 ~~~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E 735 (764)
..++|...+.||+|+||.||+|+.. ++..||||.+..... ..++|.+|+++|++++|||||+++++|...+..++|||
T Consensus 218 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E 296 (495)
T 1opk_A 218 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE 296 (495)
T ss_dssp CGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred CHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCccc-chHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEE
Confidence 3456888899999999999999975 478999999976432 46789999999999999999999999999899999999
Q ss_pred ccCCCcHHHHHhcCCC----------------CCCCHHHHccccC
Q 004275 736 YLENNSLARALFGNAI----------------TKITYTFSLHLWN 764 (764)
Q Consensus 736 y~~~GsL~~~L~~~~~----------------~~l~~~~~~~i~h 764 (764)
||++|+|.++++.... .++.|.|..+|+|
T Consensus 297 ~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH 341 (495)
T 1opk_A 297 FMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH 341 (495)
T ss_dssp CCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred ccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 9999999999985332 2467777888877
No 219
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=99.27 E-value=3e-12 Score=137.62 Aligned_cols=108 Identities=19% Similarity=0.290 Sum_probs=91.2
Q ss_pred hhcCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcC---hhcHHHHHHHHHHHHhC-CCCCccceEEEEEECCEEE
Q 004275 657 ATNNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKS---KQGNREFVNEIGMISAL-QHQNLVKLYGCCIEGNQLL 731 (764)
Q Consensus 657 ~~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~ 731 (764)
..++|...+.||+|+||.||+|+. .+|+.||||++.... ....+.+.+|.+++..+ +|||||++++++.+.+..+
T Consensus 15 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~ 94 (345)
T 1xjd_A 15 KIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLF 94 (345)
T ss_dssp -CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred ChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEE
Confidence 457799999999999999999996 468899999996532 22356788999999876 8999999999999999999
Q ss_pred EEEcccCCCcHHHHHhcCCC--------------CCCCHHHHccccC
Q 004275 732 LVYEYLENNSLARALFGNAI--------------TKITYTFSLHLWN 764 (764)
Q Consensus 732 lv~Ey~~~GsL~~~L~~~~~--------------~~l~~~~~~~i~h 764 (764)
+||||+++|+|.+++..... .++.+.|..+|+|
T Consensus 95 lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH 141 (345)
T 1xjd_A 95 FVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVY 141 (345)
T ss_dssp EEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBC
T ss_pred EEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEe
Confidence 99999999999999975321 3588899999998
No 220
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=99.27 E-value=4e-12 Score=134.50 Aligned_cols=92 Identities=32% Similarity=0.547 Sum_probs=80.0
Q ss_pred hcCccccCeeeccCCeeEEEEEE------cCCCEEEEEEcCCcC-hhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEE
Q 004275 658 TNNFDAANKIGEGGFGPVYKGTL------SDGAVIAVKQLSSKS-KQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQL 730 (764)
Q Consensus 658 ~~~~~~~~~iG~G~~g~Vy~~~~------~~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~ 730 (764)
.++|...+.||+|+||.||+|+. .++..||||.+.... ....+++.+|++++++++|||||++++++...+..
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 101 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPL 101 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCce
Confidence 45688889999999999999985 245789999997543 33457899999999999999999999999999999
Q ss_pred EEEEcccCCCcHHHHHhcC
Q 004275 731 LLVYEYLENNSLARALFGN 749 (764)
Q Consensus 731 ~lv~Ey~~~GsL~~~L~~~ 749 (764)
++||||+++|+|.+++...
T Consensus 102 ~lv~e~~~~~~L~~~l~~~ 120 (314)
T 2ivs_A 102 LLIVEYAKYGSLRGFLRES 120 (314)
T ss_dssp EEEEECCTTCBHHHHHHHT
T ss_pred EEEEeecCCCCHHHHHHHH
Confidence 9999999999999999764
No 221
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=99.26 E-value=6.4e-12 Score=132.18 Aligned_cols=108 Identities=21% Similarity=0.452 Sum_probs=89.6
Q ss_pred hhcCccccCeeeccCCeeEEEEEEc-CCCEEEEEEcCCcChhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEEc
Q 004275 657 ATNNFDAANKIGEGGFGPVYKGTLS-DGAVIAVKQLSSKSKQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVYE 735 (764)
Q Consensus 657 ~~~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E 735 (764)
..+.|+..+.||+|+||.||+|+.. +++.||+|.+........++|.+|++++.+++||||+++++++...+..++|||
T Consensus 17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 96 (302)
T 2j7t_A 17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIE 96 (302)
T ss_dssp GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEE
T ss_pred CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEE
Confidence 3456888999999999999999964 688999999976655566789999999999999999999999999999999999
Q ss_pred ccCCCcHHHHHhcCCC---------------CCCCHHHHccccC
Q 004275 736 YLENNSLARALFGNAI---------------TKITYTFSLHLWN 764 (764)
Q Consensus 736 y~~~GsL~~~L~~~~~---------------~~l~~~~~~~i~h 764 (764)
|+++|+|.+++..... .++.+.|..+|+|
T Consensus 97 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H 140 (302)
T 2j7t_A 97 FCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIH 140 (302)
T ss_dssp CCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred eCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcCCccc
Confidence 9999999999864211 2477888888887
No 222
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=99.26 E-value=3.5e-12 Score=137.43 Aligned_cols=106 Identities=25% Similarity=0.326 Sum_probs=91.1
Q ss_pred cCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcC---hhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEE
Q 004275 659 NNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKS---KQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVY 734 (764)
Q Consensus 659 ~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 734 (764)
++|+..+.||+|+||.||+++. .+|+.||||++.... ....+.+.+|++++.+++|||||++++++.+.+..++||
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 120 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence 4688899999999999999995 478999999996532 223567899999999999999999999999999999999
Q ss_pred cccCCCcHHHHHhcCCC--------------CCCCHHHHccccC
Q 004275 735 EYLENNSLARALFGNAI--------------TKITYTFSLHLWN 764 (764)
Q Consensus 735 Ey~~~GsL~~~L~~~~~--------------~~l~~~~~~~i~h 764 (764)
||+++|+|.+++..... .+|.|.|..+|+|
T Consensus 121 e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH 164 (350)
T 1rdq_E 121 EYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIY 164 (350)
T ss_dssp ECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 99999999999975321 3578899999988
No 223
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=99.26 E-value=5.2e-12 Score=131.53 Aligned_cols=107 Identities=29% Similarity=0.474 Sum_probs=90.8
Q ss_pred hcCccccCeeeccCCeeEEEEEEc-CCCEEEEEEcCCc--ChhcHHHHHHHHHHHHhC-CCCCccceEEEEEECCEEEEE
Q 004275 658 TNNFDAANKIGEGGFGPVYKGTLS-DGAVIAVKQLSSK--SKQGNREFVNEIGMISAL-QHQNLVKLYGCCIEGNQLLLV 733 (764)
Q Consensus 658 ~~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv 733 (764)
.++|+..+.||+|+||.||+|+.. +++.||||++... ......++.+|+..+.++ +|||||++++++...+..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv 89 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQ 89 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEE
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence 455888999999999999999964 7899999999753 233456789999999999 899999999999999999999
Q ss_pred EcccCCCcHHHHHhcCC------------------CCCCCHHHHccccC
Q 004275 734 YEYLENNSLARALFGNA------------------ITKITYTFSLHLWN 764 (764)
Q Consensus 734 ~Ey~~~GsL~~~L~~~~------------------~~~l~~~~~~~i~h 764 (764)
|||+++|+|.+++.... ..++.+.|..+|+|
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH 138 (289)
T 1x8b_A 90 NEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVH 138 (289)
T ss_dssp EECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred EEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCEee
Confidence 99999999999997531 13577888888887
No 224
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=99.26 E-value=5.9e-12 Score=134.72 Aligned_cols=93 Identities=25% Similarity=0.531 Sum_probs=79.3
Q ss_pred hcCccccCeeeccCCeeEEEEEE--------cCCCEEEEEEcCCcC-hhcHHHHHHHHHHHHhC-CCCCccceEEEEEEC
Q 004275 658 TNNFDAANKIGEGGFGPVYKGTL--------SDGAVIAVKQLSSKS-KQGNREFVNEIGMISAL-QHQNLVKLYGCCIEG 727 (764)
Q Consensus 658 ~~~~~~~~~iG~G~~g~Vy~~~~--------~~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~ 727 (764)
.++|...+.||+|+||.||+|+. .++..||||++.... ....+++.+|++++.++ +||||+++++++...
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 113 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 113 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence 45688889999999999999985 356789999997543 33456799999999999 899999999999999
Q ss_pred CEEEEEEcccCCCcHHHHHhcCC
Q 004275 728 NQLLLVYEYLENNSLARALFGNA 750 (764)
Q Consensus 728 ~~~~lv~Ey~~~GsL~~~L~~~~ 750 (764)
+..++||||+++|+|.+++....
T Consensus 114 ~~~~lv~e~~~~~~L~~~l~~~~ 136 (334)
T 2pvf_A 114 GPLYVIVEYASKGNLREYLRARR 136 (334)
T ss_dssp SCCEEEEECCTTCBHHHHHHTTS
T ss_pred CceEEEEECCCCCcHHHHHHHhc
Confidence 99999999999999999998643
No 225
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=99.26 E-value=1.3e-12 Score=138.88 Aligned_cols=115 Identities=20% Similarity=0.386 Sum_probs=94.3
Q ss_pred cHHHHHHhhcCccccCeeeccCCeeEEEEEEc------CCCEEEEEEcCCcC-hhcHHHHHHHHHHHHhCCCCCccceEE
Q 004275 650 TLRQIKAATNNFDAANKIGEGGFGPVYKGTLS------DGAVIAVKQLSSKS-KQGNREFVNEIGMISALQHQNLVKLYG 722 (764)
Q Consensus 650 ~~~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~------~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g 722 (764)
..+++....++|...+.||+|+||.||+|+.. +++.||||.+.... .....+|.+|++++++++||||+++++
T Consensus 16 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~ 95 (322)
T 1p4o_A 16 VPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLG 95 (322)
T ss_dssp CCCTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEE
T ss_pred ChhhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEE
Confidence 33444556677999999999999999999853 46789999997543 334567999999999999999999999
Q ss_pred EEEECCEEEEEEcccCCCcHHHHHhcCC------------------------CCCCCHHHHccccC
Q 004275 723 CCIEGNQLLLVYEYLENNSLARALFGNA------------------------ITKITYTFSLHLWN 764 (764)
Q Consensus 723 ~~~~~~~~~lv~Ey~~~GsL~~~L~~~~------------------------~~~l~~~~~~~i~h 764 (764)
++...+..++||||+++|+|.+++.... ..++.+.|..+|+|
T Consensus 96 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H 161 (322)
T 1p4o_A 96 VVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVH 161 (322)
T ss_dssp EECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBC
T ss_pred EEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCcc
Confidence 9998899999999999999999997421 12477888888888
No 226
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=99.25 E-value=3.6e-12 Score=139.48 Aligned_cols=107 Identities=19% Similarity=0.273 Sum_probs=89.0
Q ss_pred hcCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcC---hhcHHHHHHHHHHHHhC-CCCCccceEEEEEECCEEEE
Q 004275 658 TNNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKS---KQGNREFVNEIGMISAL-QHQNLVKLYGCCIEGNQLLL 732 (764)
Q Consensus 658 ~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~l 732 (764)
.++|+..++||+|+||.||+|+. .+++.||||++.+.. ....+.+.+|..++.++ +|||||++++++.+.+..++
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 35688899999999999999996 467889999997532 22234688999999886 89999999999999999999
Q ss_pred EEcccCCCcHHHHHhcCCC--------------CCCCHHHHccccC
Q 004275 733 VYEYLENNSLARALFGNAI--------------TKITYTFSLHLWN 764 (764)
Q Consensus 733 v~Ey~~~GsL~~~L~~~~~--------------~~l~~~~~~~i~h 764 (764)
|||||++|+|.+++..... .+|.|.|..+|+|
T Consensus 131 V~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givH 176 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIY 176 (396)
T ss_dssp EEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBC
T ss_pred EEEcCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEe
Confidence 9999999999999975421 3588999999988
No 227
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=99.25 E-value=9.3e-12 Score=131.57 Aligned_cols=106 Identities=25% Similarity=0.397 Sum_probs=90.3
Q ss_pred cCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcCh--hcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEEc
Q 004275 659 NNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKSK--QGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVYE 735 (764)
Q Consensus 659 ~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E 735 (764)
++|...+.||+|+||.||+|+. .+|+.||||++..... ...+.+.+|++++.+++|||||++++++...+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE 82 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence 5688899999999999999996 4689999999865432 234678899999999999999999999999999999999
Q ss_pred ccCCCcHHHHHhcCCC--------------CCCCHHHHccccC
Q 004275 736 YLENNSLARALFGNAI--------------TKITYTFSLHLWN 764 (764)
Q Consensus 736 y~~~GsL~~~L~~~~~--------------~~l~~~~~~~i~h 764 (764)
|+++|+|.+++..... .++.+.|..+|+|
T Consensus 83 ~~~~~~l~~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~ivH 125 (311)
T 4agu_A 83 YCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIH 125 (311)
T ss_dssp CCSEEHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred eCCCchHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHCCCcC
Confidence 9999999998875432 3578888888888
No 228
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=99.25 E-value=8.6e-12 Score=129.93 Aligned_cols=107 Identities=23% Similarity=0.393 Sum_probs=91.2
Q ss_pred hcCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCc--ChhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEE
Q 004275 658 TNNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSK--SKQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVY 734 (764)
Q Consensus 658 ~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 734 (764)
.++|+..+.||+|+||.||+|.. .+|+.||||++... .....+.+.+|++++++++||||+++++++...+..++||
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 84 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 84 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence 46788999999999999999985 56889999999643 2334567899999999999999999999999999999999
Q ss_pred cccCCCcHHHHHhcCCC--------------CCCCHHHHccccC
Q 004275 735 EYLENNSLARALFGNAI--------------TKITYTFSLHLWN 764 (764)
Q Consensus 735 Ey~~~GsL~~~L~~~~~--------------~~l~~~~~~~i~h 764 (764)
||+++|+|.+++..... .++.|.|..+|+|
T Consensus 85 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H 128 (284)
T 3kk8_A 85 DLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVH 128 (284)
T ss_dssp CCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred ecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCc
Confidence 99999999988865421 3578888888888
No 229
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=99.25 E-value=4.8e-12 Score=134.95 Aligned_cols=106 Identities=29% Similarity=0.417 Sum_probs=89.6
Q ss_pred cCccccCeeeccCCeeEEEEEE-----cCCCEEEEEEcCCcChhcHHHHHHHHHHHHhCCCCCccceEEEEEE--CCEEE
Q 004275 659 NNFDAANKIGEGGFGPVYKGTL-----SDGAVIAVKQLSSKSKQGNREFVNEIGMISALQHQNLVKLYGCCIE--GNQLL 731 (764)
Q Consensus 659 ~~~~~~~~iG~G~~g~Vy~~~~-----~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~--~~~~~ 731 (764)
++|+..+.||+|+||.||+|++ .+++.||||++........+.|.+|++++.+++|+||+++++++.. .+..+
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 102 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR 102 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEE
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEE
Confidence 4588889999999999999984 4678999999987766666789999999999999999999999874 45689
Q ss_pred EEEcccCCCcHHHHHhcCCC---------------CCCCHHHHccccC
Q 004275 732 LVYEYLENNSLARALFGNAI---------------TKITYTFSLHLWN 764 (764)
Q Consensus 732 lv~Ey~~~GsL~~~L~~~~~---------------~~l~~~~~~~i~h 764 (764)
+||||+++|+|.+++..... .++.+.|..+|+|
T Consensus 103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH 150 (327)
T 3lxl_A 103 LVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVH 150 (327)
T ss_dssp EEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred EEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccC
Confidence 99999999999999975211 3467778888877
No 230
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=99.25 E-value=8.3e-12 Score=129.99 Aligned_cols=106 Identities=18% Similarity=0.326 Sum_probs=89.5
Q ss_pred cCccccCeeeccCCeeEEEEEEc-CCCEEEEEEcCCcCh------hcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEE
Q 004275 659 NNFDAANKIGEGGFGPVYKGTLS-DGAVIAVKQLSSKSK------QGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLL 731 (764)
Q Consensus 659 ~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~~------~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 731 (764)
++|...+.||+|+||.||+|... +|+.||||.+..... ...+.|.+|++++.+++||||+++++++...+..+
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 84 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence 34888899999999999999964 689999999864321 13578999999999999999999999999999999
Q ss_pred EEEcccCCCcHHHHHhcCCC--------------CCCCHHHHccccC
Q 004275 732 LVYEYLENNSLARALFGNAI--------------TKITYTFSLHLWN 764 (764)
Q Consensus 732 lv~Ey~~~GsL~~~L~~~~~--------------~~l~~~~~~~i~h 764 (764)
+||||+++|+|.+++..... .++.+.|..+|+|
T Consensus 85 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H 131 (283)
T 3bhy_A 85 LILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAH 131 (283)
T ss_dssp EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred EEEeecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccC
Confidence 99999999999999975321 3477788888887
No 231
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=99.25 E-value=1.1e-11 Score=138.24 Aligned_cols=104 Identities=28% Similarity=0.473 Sum_probs=88.7
Q ss_pred hcCccccCeeeccCCeeEEEEEEcCCCEEEEEEcCCcChhcHHHHHHHHHHHHhCCCCCccceEEEEEECC-EEEEEEcc
Q 004275 658 TNNFDAANKIGEGGFGPVYKGTLSDGAVIAVKQLSSKSKQGNREFVNEIGMISALQHQNLVKLYGCCIEGN-QLLLVYEY 736 (764)
Q Consensus 658 ~~~~~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~-~~~lv~Ey 736 (764)
.++|...+.||+|+||.||+|... |+.||||.++... ..++|.+|+++|++++|||||+++++|...+ ..++||||
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~ 268 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 268 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEEC
T ss_pred hHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEe
Confidence 456888899999999999999975 7799999997643 4568999999999999999999999998765 78999999
Q ss_pred cCCCcHHHHHhcCCC----------------CCCCHHHHccccC
Q 004275 737 LENNSLARALFGNAI----------------TKITYTFSLHLWN 764 (764)
Q Consensus 737 ~~~GsL~~~L~~~~~----------------~~l~~~~~~~i~h 764 (764)
|++|+|.++++.... .++.|.|..+|+|
T Consensus 269 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH 312 (450)
T 1k9a_A 269 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVH 312 (450)
T ss_dssp CTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred cCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeC
Confidence 999999999985432 2467778888887
No 232
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=99.25 E-value=9.1e-12 Score=132.79 Aligned_cols=98 Identities=21% Similarity=0.267 Sum_probs=84.9
Q ss_pred cCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcChhcHHHHHHHHHHHHhCC-CCCccceEEEEEECCEEEEEEcccCCCc
Q 004275 664 ANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKSKQGNREFVNEIGMISALQ-HQNLVKLYGCCIEGNQLLLVYEYLENNS 741 (764)
Q Consensus 664 ~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lv~Ey~~~Gs 741 (764)
.+.||+|+||.||+|+. .+++.||||++... ....+.+|++++.+++ |||||++++++.+.+..++||||+++|+
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 92 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGE 92 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCc
Confidence 47899999999999996 46899999999643 3457889999999997 9999999999999999999999999999
Q ss_pred HHHHHhcCCC--------------CCCCHHHHccccC
Q 004275 742 LARALFGNAI--------------TKITYTFSLHLWN 764 (764)
Q Consensus 742 L~~~L~~~~~--------------~~l~~~~~~~i~h 764 (764)
|.+++..... .++.|.|..+|+|
T Consensus 93 L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH 129 (325)
T 3kn6_A 93 LFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVH 129 (325)
T ss_dssp HHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCee
Confidence 9999986532 3577888888888
No 233
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=99.25 E-value=6.3e-12 Score=137.26 Aligned_cols=93 Identities=25% Similarity=0.488 Sum_probs=79.6
Q ss_pred hcCccccCeeeccCCeeEEEEEEc--------CCCEEEEEEcCCcC-hhcHHHHHHHHHHHHhC-CCCCccceEEEEEEC
Q 004275 658 TNNFDAANKIGEGGFGPVYKGTLS--------DGAVIAVKQLSSKS-KQGNREFVNEIGMISAL-QHQNLVKLYGCCIEG 727 (764)
Q Consensus 658 ~~~~~~~~~iG~G~~g~Vy~~~~~--------~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~ 727 (764)
.+.|...+.||+|+||.||+|+.. ++..||||++.... ....+++.+|++++.++ +|||||+++++|...
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 147 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 147 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccC
Confidence 356888899999999999999842 23579999997643 33457899999999999 899999999999999
Q ss_pred CEEEEEEcccCCCcHHHHHhcCC
Q 004275 728 NQLLLVYEYLENNSLARALFGNA 750 (764)
Q Consensus 728 ~~~~lv~Ey~~~GsL~~~L~~~~ 750 (764)
+..++||||+++|+|.+++....
T Consensus 148 ~~~~lv~e~~~~g~L~~~l~~~~ 170 (382)
T 3tt0_A 148 GPLYVIVEYASKGNLREYLQARR 170 (382)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTC
T ss_pred CceEEEEEecCCCcHHHHHHHhc
Confidence 99999999999999999998643
No 234
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=99.25 E-value=1.2e-11 Score=129.29 Aligned_cols=105 Identities=29% Similarity=0.468 Sum_probs=89.7
Q ss_pred cCccccCeeeccCCeeEEEEEEcCCCEEEEEEcCCcCh--hcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEEcc
Q 004275 659 NNFDAANKIGEGGFGPVYKGTLSDGAVIAVKQLSSKSK--QGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVYEY 736 (764)
Q Consensus 659 ~~~~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 736 (764)
++|...+.||+|+||.||+|+..+|+.||||++..... ...+.+.+|++++++++|||||++++++...+..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 45888899999999999999988899999999965432 2346789999999999999999999999999999999999
Q ss_pred cCCCcHHHHHhcCCC---------------CCCCHHHHccccC
Q 004275 737 LENNSLARALFGNAI---------------TKITYTFSLHLWN 764 (764)
Q Consensus 737 ~~~GsL~~~L~~~~~---------------~~l~~~~~~~i~h 764 (764)
+++ +|.+++..... .++.+.|..+|+|
T Consensus 82 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H 123 (288)
T 1ob3_A 82 LDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLH 123 (288)
T ss_dssp CSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred cCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 996 89999875321 2578888888888
No 235
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=99.25 E-value=6.4e-12 Score=143.12 Aligned_cols=107 Identities=21% Similarity=0.312 Sum_probs=91.2
Q ss_pred hcCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcC---hhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEE
Q 004275 658 TNNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKS---KQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLV 733 (764)
Q Consensus 658 ~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv 733 (764)
.++|...++||+|+||.||+|+. .+|+.||||++.... ......+.+|++++.+++|||||++++++.+.+..++|
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 262 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV 262 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence 45688899999999999999996 578999999996532 22346789999999999999999999999999999999
Q ss_pred EcccCCCcHHHHHhcCCC----------------CCCCHHHHccccC
Q 004275 734 YEYLENNSLARALFGNAI----------------TKITYTFSLHLWN 764 (764)
Q Consensus 734 ~Ey~~~GsL~~~L~~~~~----------------~~l~~~~~~~i~h 764 (764)
||||++|+|.+++..... .++.|.|..+|+|
T Consensus 263 mEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIvH 309 (576)
T 2acx_A 263 LTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVY 309 (576)
T ss_dssp ECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred EEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCEec
Confidence 999999999999976432 2477888888888
No 236
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=99.25 E-value=2.2e-12 Score=136.62 Aligned_cols=107 Identities=19% Similarity=0.266 Sum_probs=88.8
Q ss_pred hcCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcCh---hcHHHHHHHHHHHHhCCCCCccceEEEEEECC----E
Q 004275 658 TNNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKSK---QGNREFVNEIGMISALQHQNLVKLYGCCIEGN----Q 729 (764)
Q Consensus 658 ~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~----~ 729 (764)
.+.|...+.||+|+||.||+|+. .+++.||||++..... ...+.|.+|++++.+++|||||++++++.... .
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 35688899999999999999994 6788999999976432 23457899999999999999999999987654 3
Q ss_pred EEEEEcccCCCcHHHHHhcCCC--------------CCCCHHHHccccC
Q 004275 730 LLLVYEYLENNSLARALFGNAI--------------TKITYTFSLHLWN 764 (764)
Q Consensus 730 ~~lv~Ey~~~GsL~~~L~~~~~--------------~~l~~~~~~~i~h 764 (764)
.++||||+++|+|.++++.... .++.|.|..+|+|
T Consensus 91 ~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH 139 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIH 139 (311)
T ss_dssp EEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred cEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCc
Confidence 4999999999999999975321 3578888888888
No 237
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=99.25 E-value=7.8e-12 Score=141.78 Aligned_cols=107 Identities=21% Similarity=0.370 Sum_probs=88.2
Q ss_pred hcCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcCh-------------hcHHHHHHHHHHHHhCCCCCccceEEE
Q 004275 658 TNNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKSK-------------QGNREFVNEIGMISALQHQNLVKLYGC 723 (764)
Q Consensus 658 ~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~-------------~~~~~f~~E~~~l~~l~H~niv~l~g~ 723 (764)
.+.|...+.||+|+||.||+|+. .+++.||||++..... ...+++.+|++++++++|||||+++++
T Consensus 35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~ 114 (504)
T 3q5i_A 35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV 114 (504)
T ss_dssp GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 46688899999999999999995 4678999999865321 224679999999999999999999999
Q ss_pred EEECCEEEEEEcccCCCcHHHHHhcCCC--------------CCCCHHHHccccC
Q 004275 724 CIEGNQLLLVYEYLENNSLARALFGNAI--------------TKITYTFSLHLWN 764 (764)
Q Consensus 724 ~~~~~~~~lv~Ey~~~GsL~~~L~~~~~--------------~~l~~~~~~~i~h 764 (764)
+.+.+..++|||||++|+|.+++..... .++.|.|..+|+|
T Consensus 115 ~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH 169 (504)
T 3q5i_A 115 FEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHNIVH 169 (504)
T ss_dssp EECSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred EEcCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEe
Confidence 9999999999999999999999865321 3578888888888
No 238
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=99.24 E-value=8.4e-12 Score=129.04 Aligned_cols=106 Identities=28% Similarity=0.476 Sum_probs=84.3
Q ss_pred hcCccccCeeeccCCeeEEEEEEcCCCEEEEEEcCCcCh----hcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEE
Q 004275 658 TNNFDAANKIGEGGFGPVYKGTLSDGAVIAVKQLSSKSK----QGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLV 733 (764)
Q Consensus 658 ~~~~~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~----~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv 733 (764)
.++|+..+.||+|+||.||+|.. .++.||||++..... ...+.+.+|++++++++||||+++++++...+..++|
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV 84 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEE-TTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred hhheeeeeeeccCCCeEEEEEEE-cCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence 35688899999999999999996 488999999965322 2346799999999999999999999999999999999
Q ss_pred EcccCCCcHHHHHhcCCC-------------CCCCHHHHcc---ccC
Q 004275 734 YEYLENNSLARALFGNAI-------------TKITYTFSLH---LWN 764 (764)
Q Consensus 734 ~Ey~~~GsL~~~L~~~~~-------------~~l~~~~~~~---i~h 764 (764)
|||+++|+|.+++..... .++.+.|+.+ |+|
T Consensus 85 ~e~~~~~~L~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H 131 (271)
T 3dtc_A 85 MEFARGGPLNRVLSGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIH 131 (271)
T ss_dssp EECCTTEEHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCC
T ss_pred EEcCCCCCHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCCceee
Confidence 999999999999865431 2467777777 666
No 239
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=99.24 E-value=5.1e-12 Score=134.56 Aligned_cols=91 Identities=24% Similarity=0.367 Sum_probs=76.9
Q ss_pred hcCccccCeeeccCCeeEEEEEEcCCCEEEEEEcCCcChhcHHHHHHHHHHHHhCCCCCccceEEEEEECC----EEEEE
Q 004275 658 TNNFDAANKIGEGGFGPVYKGTLSDGAVIAVKQLSSKSKQGNREFVNEIGMISALQHQNLVKLYGCCIEGN----QLLLV 733 (764)
Q Consensus 658 ~~~~~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~----~~~lv 733 (764)
.++|+..+.||+|+||.||+|+.. ++.||||++..... ....+.+|+.++.+++|||||++++++.... ..++|
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv 100 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQDK-QSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLI 100 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCch-HHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEE
Confidence 356888999999999999999875 78999999965432 3345677999999999999999999998744 46999
Q ss_pred EcccCCCcHHHHHhcCC
Q 004275 734 YEYLENNSLARALFGNA 750 (764)
Q Consensus 734 ~Ey~~~GsL~~~L~~~~ 750 (764)
|||+++|+|.++++...
T Consensus 101 ~e~~~~g~L~~~l~~~~ 117 (322)
T 3soc_A 101 TAFHEKGSLSDFLKANV 117 (322)
T ss_dssp EECCTTCBHHHHHHHCC
T ss_pred EecCCCCCHHHHHHhcC
Confidence 99999999999997653
No 240
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=99.24 E-value=5.8e-12 Score=131.59 Aligned_cols=106 Identities=23% Similarity=0.370 Sum_probs=89.6
Q ss_pred cCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcC-hhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEEcc
Q 004275 659 NNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKS-KQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVYEY 736 (764)
Q Consensus 659 ~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 736 (764)
+.|...+.||+|+||.||++.. .++..||+|++.... ....+.+.+|++++.+++||||+++++++...+..++||||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 101 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMET 101 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEe
Confidence 4488889999999999999995 568899999996543 33457899999999999999999999999999999999999
Q ss_pred cCCCcHHHHHhcC-----C-------------CCCCCHHHHccccC
Q 004275 737 LENNSLARALFGN-----A-------------ITKITYTFSLHLWN 764 (764)
Q Consensus 737 ~~~GsL~~~L~~~-----~-------------~~~l~~~~~~~i~h 764 (764)
+++|+|.+++... . ..++.+.|..+|+|
T Consensus 102 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH 147 (285)
T 3is5_A 102 CEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVH 147 (285)
T ss_dssp CSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred CCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEE
Confidence 9999999998532 1 13467888888887
No 241
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=99.24 E-value=9.3e-12 Score=140.43 Aligned_cols=106 Identities=24% Similarity=0.390 Sum_probs=91.5
Q ss_pred cCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcC---hhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEE
Q 004275 659 NNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKS---KQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVY 734 (764)
Q Consensus 659 ~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 734 (764)
+.|...+.||+|+||.||+|+. .+|+.||||++.... ....+.+.+|++++++++|||||++++++...+..++||
T Consensus 26 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 105 (484)
T 3nyv_A 26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVG 105 (484)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 4488889999999999999995 478999999985432 234678999999999999999999999999999999999
Q ss_pred cccCCCcHHHHHhcCCC--------------CCCCHHHHccccC
Q 004275 735 EYLENNSLARALFGNAI--------------TKITYTFSLHLWN 764 (764)
Q Consensus 735 Ey~~~GsL~~~L~~~~~--------------~~l~~~~~~~i~h 764 (764)
||+++|+|.+++..... .++.|.|..+|+|
T Consensus 106 e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH 149 (484)
T 3nyv_A 106 EVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVH 149 (484)
T ss_dssp CCCCSCBHHHHHHTCSCCBHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred ecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeee
Confidence 99999999999976532 3578889999988
No 242
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=99.24 E-value=6.9e-12 Score=134.65 Aligned_cols=93 Identities=28% Similarity=0.512 Sum_probs=78.7
Q ss_pred hhcCccccCeeeccCCeeEEEEEE------cCCCEEEEEEcCCcC-hhcHHHHHHHHHHHHhC-CCCCccceEEEEEECC
Q 004275 657 ATNNFDAANKIGEGGFGPVYKGTL------SDGAVIAVKQLSSKS-KQGNREFVNEIGMISAL-QHQNLVKLYGCCIEGN 728 (764)
Q Consensus 657 ~~~~~~~~~~iG~G~~g~Vy~~~~------~~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~ 728 (764)
..++|...+.||+|+||.||+|+. .++..||||.+.... ....+.+.+|++++.++ +||||+++++++...+
T Consensus 43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 122 (344)
T 1rjb_A 43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSG 122 (344)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCC
Confidence 356788899999999999999985 245689999997542 23456899999999999 8999999999999999
Q ss_pred EEEEEEcccCCCcHHHHHhcC
Q 004275 729 QLLLVYEYLENNSLARALFGN 749 (764)
Q Consensus 729 ~~~lv~Ey~~~GsL~~~L~~~ 749 (764)
..++||||+++|+|.+++...
T Consensus 123 ~~~lv~e~~~~g~L~~~l~~~ 143 (344)
T 1rjb_A 123 PIYLIFEYCCYGDLLNYLRSK 143 (344)
T ss_dssp SCEEEEECCTTCBHHHHHHTT
T ss_pred ccEEEEecCCCCcHHHHHhhc
Confidence 999999999999999999864
No 243
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=99.24 E-value=8.7e-12 Score=131.77 Aligned_cols=106 Identities=27% Similarity=0.471 Sum_probs=87.7
Q ss_pred cCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCc---ChhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEE
Q 004275 659 NNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSK---SKQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVY 734 (764)
Q Consensus 659 ~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 734 (764)
++|...+.||+|+||.||+|.. .+|+.||||++... .....+++.+|++++.+++||||+++++++...+..++||
T Consensus 32 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 111 (310)
T 2wqm_A 32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 111 (310)
T ss_dssp GGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEE
Confidence 4588899999999999999995 57899999999753 2334567999999999999999999999999999999999
Q ss_pred cccCCCcHHHHHhcC----C--------------CCCCCHHHHccccC
Q 004275 735 EYLENNSLARALFGN----A--------------ITKITYTFSLHLWN 764 (764)
Q Consensus 735 Ey~~~GsL~~~L~~~----~--------------~~~l~~~~~~~i~h 764 (764)
||+++|+|.+++... . ..++.+.|..+|+|
T Consensus 112 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H 159 (310)
T 2wqm_A 112 ELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMH 159 (310)
T ss_dssp ECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred ecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeeC
Confidence 999999999998631 1 12477788888887
No 244
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=99.24 E-value=1.9e-11 Score=133.66 Aligned_cols=107 Identities=15% Similarity=0.272 Sum_probs=91.3
Q ss_pred hcCccccCeeecc--CCeeEEEEEE-cCCCEEEEEEcCCcC--hhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEE
Q 004275 658 TNNFDAANKIGEG--GFGPVYKGTL-SDGAVIAVKQLSSKS--KQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLL 732 (764)
Q Consensus 658 ~~~~~~~~~iG~G--~~g~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 732 (764)
.++|+..+.||+| +||.||+|+. .+|+.||||++.... ....+.+.+|++++++++|||||++++++...+..++
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 103 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV 103 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence 3558889999999 9999999996 478999999996532 3334678899999999999999999999999999999
Q ss_pred EEcccCCCcHHHHHhcCCC----------------CCCCHHHHccccC
Q 004275 733 VYEYLENNSLARALFGNAI----------------TKITYTFSLHLWN 764 (764)
Q Consensus 733 v~Ey~~~GsL~~~L~~~~~----------------~~l~~~~~~~i~h 764 (764)
|||||++|+|.+++..... .++.|.|..+|+|
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH 151 (389)
T 3gni_B 104 VTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVH 151 (389)
T ss_dssp EEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred EEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 9999999999999976421 2477888888887
No 245
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=99.24 E-value=5.4e-12 Score=142.71 Aligned_cols=106 Identities=21% Similarity=0.367 Sum_probs=86.8
Q ss_pred cCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcC--hhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEEc
Q 004275 659 NNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKS--KQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVYE 735 (764)
Q Consensus 659 ~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E 735 (764)
+.|...+.||+|+||.||+|+. .++..||||++.... ......+.+|++++++++|||||+++++|...+..++|||
T Consensus 37 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 116 (494)
T 3lij_A 37 EMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVME 116 (494)
T ss_dssp HHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred cCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEe
Confidence 3488889999999999999995 478899999996542 2235679999999999999999999999999999999999
Q ss_pred ccCCCcHHHHHhcCCC--------------CCCCHHHHccccC
Q 004275 736 YLENNSLARALFGNAI--------------TKITYTFSLHLWN 764 (764)
Q Consensus 736 y~~~GsL~~~L~~~~~--------------~~l~~~~~~~i~h 764 (764)
||++|+|.+++..... .++.|.|..+|+|
T Consensus 117 ~~~~g~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH 159 (494)
T 3lij_A 117 CYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVH 159 (494)
T ss_dssp CCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred cCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcee
Confidence 9999999998865321 3588899999988
No 246
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=99.23 E-value=7.5e-12 Score=139.85 Aligned_cols=107 Identities=26% Similarity=0.486 Sum_probs=90.6
Q ss_pred HhhcCccccCeeeccCCeeEEEEEEcCCCEEEEEEcCCcChhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEEc
Q 004275 656 AATNNFDAANKIGEGGFGPVYKGTLSDGAVIAVKQLSSKSKQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVYE 735 (764)
Q Consensus 656 ~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E 735 (764)
...++|...+.||+|+||.||+|...++..||||.+.... ...++|.+|+++|++++|||||++++++.. +..++|||
T Consensus 181 i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e 258 (452)
T 1fmk_A 181 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTE 258 (452)
T ss_dssp CCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEC
T ss_pred cChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEeh
Confidence 3456688899999999999999999887889999997643 245689999999999999999999999865 67899999
Q ss_pred ccCCCcHHHHHhcCC----------------CCCCCHHHHccccC
Q 004275 736 YLENNSLARALFGNA----------------ITKITYTFSLHLWN 764 (764)
Q Consensus 736 y~~~GsL~~~L~~~~----------------~~~l~~~~~~~i~h 764 (764)
||++|+|.++++... ..++.|.|..+|+|
T Consensus 259 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH 303 (452)
T 1fmk_A 259 YMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVH 303 (452)
T ss_dssp CCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred hhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeC
Confidence 999999999997421 13577888888888
No 247
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=99.23 E-value=1.9e-11 Score=129.77 Aligned_cols=104 Identities=30% Similarity=0.518 Sum_probs=86.9
Q ss_pred ccccCeeeccCCeeEEEEEEc-----CCCEEEEEEcCCcC-hhcHHHHHHHHHHHHhCCCCCccceEEEEEEC--CEEEE
Q 004275 661 FDAANKIGEGGFGPVYKGTLS-----DGAVIAVKQLSSKS-KQGNREFVNEIGMISALQHQNLVKLYGCCIEG--NQLLL 732 (764)
Q Consensus 661 ~~~~~~iG~G~~g~Vy~~~~~-----~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--~~~~l 732 (764)
|+..+.||+|+||.||++.+. +++.||||++.... ....+.|.+|++++++++|||||++++++... ...++
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 112 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL 112 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence 478899999999999998752 67899999997643 33456799999999999999999999999984 67899
Q ss_pred EEcccCCCcHHHHHhcCCC-------------CCCCHHHHccccC
Q 004275 733 VYEYLENNSLARALFGNAI-------------TKITYTFSLHLWN 764 (764)
Q Consensus 733 v~Ey~~~GsL~~~L~~~~~-------------~~l~~~~~~~i~h 764 (764)
||||+++|+|.+++..... .++.+.|..+|+|
T Consensus 113 v~e~~~~~~L~~~l~~~~~~~~~~~~i~~~l~~~l~~LH~~~ivH 157 (318)
T 3lxp_A 113 VMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQHYIH 157 (318)
T ss_dssp EECCCTTCBHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred EEecccCCcHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhCCccC
Confidence 9999999999999976531 3467777777777
No 248
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=99.23 E-value=8.2e-12 Score=129.70 Aligned_cols=106 Identities=25% Similarity=0.430 Sum_probs=89.9
Q ss_pred cCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcC---hhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEE
Q 004275 659 NNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKS---KQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVY 734 (764)
Q Consensus 659 ~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 734 (764)
++|...+.||+|+||.||+|+. .+|+.||||.+.... ....+.+.+|++++.+++||||+++++++...+..++||
T Consensus 11 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 90 (278)
T 3cok_A 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVL 90 (278)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEE
Confidence 5688899999999999999995 578999999996432 122467999999999999999999999999999999999
Q ss_pred cccCCCcHHHHHhcCCC---------------CCCCHHHHccccC
Q 004275 735 EYLENNSLARALFGNAI---------------TKITYTFSLHLWN 764 (764)
Q Consensus 735 Ey~~~GsL~~~L~~~~~---------------~~l~~~~~~~i~h 764 (764)
||+++|+|.+++..... .++.+.|..+|+|
T Consensus 91 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H 135 (278)
T 3cok_A 91 EMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILH 135 (278)
T ss_dssp ECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred ecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 99999999999986421 2467778888877
No 249
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=99.23 E-value=1.2e-11 Score=130.14 Aligned_cols=106 Identities=30% Similarity=0.424 Sum_probs=85.5
Q ss_pred cCccccCeeeccCCeeEEEEEE-----cCCCEEEEEEcCCcC-hhcHHHHHHHHHHHHhCCCCCccceEEEEEEC--CEE
Q 004275 659 NNFDAANKIGEGGFGPVYKGTL-----SDGAVIAVKQLSSKS-KQGNREFVNEIGMISALQHQNLVKLYGCCIEG--NQL 730 (764)
Q Consensus 659 ~~~~~~~~iG~G~~g~Vy~~~~-----~~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--~~~ 730 (764)
..|+..+.||+|+||.||+|++ .+++.||||++.... ....+.+.+|++++.+++||||+++++++... ...
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 100 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 100 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence 3477889999999999999984 467899999997543 33457899999999999999999999999876 568
Q ss_pred EEEEcccCCCcHHHHHhcCCC---------------CCCCHHHHccccC
Q 004275 731 LLVYEYLENNSLARALFGNAI---------------TKITYTFSLHLWN 764 (764)
Q Consensus 731 ~lv~Ey~~~GsL~~~L~~~~~---------------~~l~~~~~~~i~h 764 (764)
++||||+++|+|.+++..... .++.+.|..+|+|
T Consensus 101 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H 149 (302)
T 4e5w_A 101 KLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVH 149 (302)
T ss_dssp EEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred EEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcCCccc
Confidence 999999999999999954321 2477788888887
No 250
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=99.23 E-value=1.2e-11 Score=128.17 Aligned_cols=107 Identities=21% Similarity=0.356 Sum_probs=90.8
Q ss_pred hcCccccCeeeccCCeeEEEEEEc-CCCEEEEEEcCCcC---hhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEE
Q 004275 658 TNNFDAANKIGEGGFGPVYKGTLS-DGAVIAVKQLSSKS---KQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLV 733 (764)
Q Consensus 658 ~~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv 733 (764)
.++|...+.||+|+||.||+|+.. +|+.||||.+.... ....+.+.+|++++++++||||+++++++...+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV 89 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence 356888999999999999999964 78999999996532 22356799999999999999999999999999999999
Q ss_pred EcccCCCcHHHHHhcCCC--------------CCCCHHHHccccC
Q 004275 734 YEYLENNSLARALFGNAI--------------TKITYTFSLHLWN 764 (764)
Q Consensus 734 ~Ey~~~GsL~~~L~~~~~--------------~~l~~~~~~~i~h 764 (764)
|||+++|+|.+++..... .++.+.|..+|+|
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H 134 (276)
T 2h6d_A 90 MEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVH 134 (276)
T ss_dssp EECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHCSSC
T ss_pred EeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcc
Confidence 999999999999965321 3577888888887
No 251
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=99.23 E-value=8.9e-12 Score=134.77 Aligned_cols=106 Identities=19% Similarity=0.352 Sum_probs=90.2
Q ss_pred cCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCc-ChhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEEcc
Q 004275 659 NNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSK-SKQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVYEY 736 (764)
Q Consensus 659 ~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 736 (764)
++|...+.||+|+||.||+|.. .+++.||+|++... .....+.+.+|++++.+++|||||++++++...+..++||||
T Consensus 33 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 112 (360)
T 3eqc_A 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 112 (360)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred ccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEEC
Confidence 4588899999999999999996 47899999999754 333456899999999999999999999999999999999999
Q ss_pred cCCCcHHHHHhcCCC--------------CCCCHHHHc-cccC
Q 004275 737 LENNSLARALFGNAI--------------TKITYTFSL-HLWN 764 (764)
Q Consensus 737 ~~~GsL~~~L~~~~~--------------~~l~~~~~~-~i~h 764 (764)
+++|+|.+++..... .++.|.|.. +|+|
T Consensus 113 ~~~~~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~i~H 155 (360)
T 3eqc_A 113 MDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMH 155 (360)
T ss_dssp CTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_pred CCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHhCCEEc
Confidence 999999999975421 246777774 7887
No 252
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=99.23 E-value=1e-11 Score=132.36 Aligned_cols=107 Identities=26% Similarity=0.409 Sum_probs=86.7
Q ss_pred hcCccccCeeeccCCeeEEEEEE------cCCCEEEEEEcCCc-ChhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEE
Q 004275 658 TNNFDAANKIGEGGFGPVYKGTL------SDGAVIAVKQLSSK-SKQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQL 730 (764)
Q Consensus 658 ~~~~~~~~~iG~G~~g~Vy~~~~------~~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~ 730 (764)
.++|...+.||+|+||.||+|+. .++..||||.+... ......+|.+|++++.+++||||+++++++...+..
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 108 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 108 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCc
Confidence 35688889999999999999983 35678999999754 334456899999999999999999999999998899
Q ss_pred EEEEcccCCCcHHHHHhcCCC---------------------CCCCHHHHccccC
Q 004275 731 LLVYEYLENNSLARALFGNAI---------------------TKITYTFSLHLWN 764 (764)
Q Consensus 731 ~lv~Ey~~~GsL~~~L~~~~~---------------------~~l~~~~~~~i~h 764 (764)
++||||+++|+|.+++..... .++.+.|..+|+|
T Consensus 109 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H 163 (327)
T 2yfx_A 109 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIH 163 (327)
T ss_dssp EEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred EEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeec
Confidence 999999999999999986531 1356777778877
No 253
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=99.23 E-value=5.5e-12 Score=141.30 Aligned_cols=106 Identities=22% Similarity=0.362 Sum_probs=90.6
Q ss_pred cCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcCh---hcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEE
Q 004275 659 NNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKSK---QGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVY 734 (764)
Q Consensus 659 ~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 734 (764)
++|...+.||+|+||.||+|+. .+|+.||||.+..... ...+.+.+|+++++.++|||||++++++...+..++||
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 95 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVM 95 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 5688889999999999999995 4789999999965321 23467899999999999999999999999999999999
Q ss_pred cccCCCcHHHHHhcCCC--------------CCCCHHHHccccC
Q 004275 735 EYLENNSLARALFGNAI--------------TKITYTFSLHLWN 764 (764)
Q Consensus 735 Ey~~~GsL~~~L~~~~~--------------~~l~~~~~~~i~h 764 (764)
||+++|+|.+++..... .++.+.|..+|+|
T Consensus 96 E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH 139 (476)
T 2y94_A 96 EYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVH 139 (476)
T ss_dssp ECCSSEEHHHHTTSSSSCCHHHHHHHHHHHHHHHHHHHTTTEEC
T ss_pred eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCc
Confidence 99999999999975431 3577888888887
No 254
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=99.23 E-value=1.2e-11 Score=131.76 Aligned_cols=106 Identities=30% Similarity=0.492 Sum_probs=87.8
Q ss_pred cCccccCeeeccCCeeEEEEEE-----cCCCEEEEEEcCCcChhcHHHHHHHHHHHHhCCCCCccceEEEEEECC--EEE
Q 004275 659 NNFDAANKIGEGGFGPVYKGTL-----SDGAVIAVKQLSSKSKQGNREFVNEIGMISALQHQNLVKLYGCCIEGN--QLL 731 (764)
Q Consensus 659 ~~~~~~~~iG~G~~g~Vy~~~~-----~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~--~~~ 731 (764)
+.|+..+.||+|+||.||+|+. .+++.||||++........+.|.+|++++++++||||+++++++...+ ..+
T Consensus 41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 120 (326)
T 2w1i_A 41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK 120 (326)
T ss_dssp GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCE
T ss_pred HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceE
Confidence 4477889999999999999984 368899999998765556678999999999999999999999987644 679
Q ss_pred EEEcccCCCcHHHHHhcCCC---------------CCCCHHHHccccC
Q 004275 732 LVYEYLENNSLARALFGNAI---------------TKITYTFSLHLWN 764 (764)
Q Consensus 732 lv~Ey~~~GsL~~~L~~~~~---------------~~l~~~~~~~i~h 764 (764)
+||||+++|+|.+++..... .++.+.|..+|+|
T Consensus 121 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH 168 (326)
T 2w1i_A 121 LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIH 168 (326)
T ss_dssp EEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred EEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEec
Confidence 99999999999999986431 2466777777776
No 255
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=99.23 E-value=4.5e-12 Score=134.66 Aligned_cols=106 Identities=25% Similarity=0.544 Sum_probs=75.5
Q ss_pred hcCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcCh-hcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEEc
Q 004275 658 TNNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKSK-QGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVYE 735 (764)
Q Consensus 658 ~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E 735 (764)
.++|+..+.||+|+||.||+|.. .+|+.||||++..... ...+.+.+|++++++++|||||++++++...+..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 83 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE 83 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence 35688889999999999999984 5789999999965432 234678999999999999999999999999999999999
Q ss_pred ccCCCcHHHHHhcCC--------------------CCCCCHHHHccccC
Q 004275 736 YLENNSLARALFGNA--------------------ITKITYTFSLHLWN 764 (764)
Q Consensus 736 y~~~GsL~~~L~~~~--------------------~~~l~~~~~~~i~h 764 (764)
|++ |+|.+++.... ..++.|.|..+|+|
T Consensus 84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH 131 (317)
T 2pmi_A 84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILH 131 (317)
T ss_dssp CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeee
Confidence 999 69999986421 12467788888887
No 256
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=99.23 E-value=1.1e-11 Score=130.01 Aligned_cols=107 Identities=18% Similarity=0.248 Sum_probs=89.8
Q ss_pred hcCccccCeeeccCCeeEEEEEEc-CCCEEEEEEcCCc---ChhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEE
Q 004275 658 TNNFDAANKIGEGGFGPVYKGTLS-DGAVIAVKQLSSK---SKQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLV 733 (764)
Q Consensus 658 ~~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv 733 (764)
.+.|...+.||+|+||.||++... +++.||+|.+... .....+.+.+|++++++++|+||+++++++...+..++|
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 93 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 93 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence 345888899999999999999964 6789999998643 233456799999999999999999999999999999999
Q ss_pred EcccCCCcHHHHHhcCCC--------------CCCCHHHHccccC
Q 004275 734 YEYLENNSLARALFGNAI--------------TKITYTFSLHLWN 764 (764)
Q Consensus 734 ~Ey~~~GsL~~~L~~~~~--------------~~l~~~~~~~i~h 764 (764)
|||+++|+|.+++..... .++.+.|..+|+|
T Consensus 94 ~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H 138 (294)
T 2rku_A 94 LELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIH 138 (294)
T ss_dssp EECCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred EecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 999999999998865321 3477888888887
No 257
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=99.23 E-value=1.7e-11 Score=129.03 Aligned_cols=107 Identities=25% Similarity=0.421 Sum_probs=90.6
Q ss_pred hcCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcC-hhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEEc
Q 004275 658 TNNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKS-KQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVYE 735 (764)
Q Consensus 658 ~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E 735 (764)
.+.|...+.||+|+||.||+|+. .+++.||||.+.... ....+.+.+|++++.+++||||+++++++...+..++|||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 100 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME 100 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEE
Confidence 34588889999999999999985 578899999996543 3345789999999999999999999999999999999999
Q ss_pred ccCCCcHHHHHhcCCC-------------CCCCHHHHccccC
Q 004275 736 YLENNSLARALFGNAI-------------TKITYTFSLHLWN 764 (764)
Q Consensus 736 y~~~GsL~~~L~~~~~-------------~~l~~~~~~~i~h 764 (764)
|+++|+|.+++..... .++.+.|..+|+|
T Consensus 101 ~~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H 142 (303)
T 3a7i_A 101 YLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIH 142 (303)
T ss_dssp CCTTEEHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred eCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCcc
Confidence 9999999999975421 2467778888877
No 258
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=99.22 E-value=3.5e-12 Score=142.27 Aligned_cols=107 Identities=22% Similarity=0.278 Sum_probs=82.5
Q ss_pred hcCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCc---ChhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEE
Q 004275 658 TNNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSK---SKQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLV 733 (764)
Q Consensus 658 ~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv 733 (764)
.++|+..+.||+|+||.||+|.. .+|+.||||++... .......+.+|++++.+++|||||++++++...+..++|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 35688899999999999999984 57899999999643 223346788999999999999999999999999999999
Q ss_pred EcccCCCcHHHHHhcCCC--------------CCCCHHHH-ccccC
Q 004275 734 YEYLENNSLARALFGNAI--------------TKITYTFS-LHLWN 764 (764)
Q Consensus 734 ~Ey~~~GsL~~~L~~~~~--------------~~l~~~~~-~~i~h 764 (764)
||||++|+|.+++..... .+|.|.|. .+|+|
T Consensus 227 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~giiH 272 (446)
T 4ejn_A 227 MEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVY 272 (446)
T ss_dssp ECCCSSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHTCCCC
T ss_pred EeeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEE
Confidence 999999999999865321 35888897 88988
No 259
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.22 E-value=1.2e-11 Score=143.29 Aligned_cols=98 Identities=26% Similarity=0.449 Sum_probs=82.7
Q ss_pred eeeccCCeeEEEEEEc---CCCEEEEEEcCCcC-hhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEEcccCCCc
Q 004275 666 KIGEGGFGPVYKGTLS---DGAVIAVKQLSSKS-KQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVYEYLENNS 741 (764)
Q Consensus 666 ~iG~G~~g~Vy~~~~~---~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~Gs 741 (764)
.||+|+||.||+|... ++..||||+++... ....++|.+|+++|++++|||||+++++|.. +..++|||||++|+
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~ 421 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP 421 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence 7999999999999864 45679999997643 3356789999999999999999999999975 66899999999999
Q ss_pred HHHHHhcCCC---------------CCCCHHHHccccC
Q 004275 742 LARALFGNAI---------------TKITYTFSLHLWN 764 (764)
Q Consensus 742 L~~~L~~~~~---------------~~l~~~~~~~i~h 764 (764)
|.++++.... .++.|.|..+|+|
T Consensus 422 L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH 459 (613)
T 2ozo_A 422 LHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVH 459 (613)
T ss_dssp HHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEEc
Confidence 9999975432 2477888888887
No 260
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=99.22 E-value=1.1e-11 Score=132.88 Aligned_cols=107 Identities=18% Similarity=0.247 Sum_probs=90.2
Q ss_pred hcCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCc---ChhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEE
Q 004275 658 TNNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSK---SKQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLV 733 (764)
Q Consensus 658 ~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv 733 (764)
.+.|...+.||+|+||.||++.. .+++.||+|.+... .....+.+.+|++++.+++|+||+++++++.+.+..++|
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 119 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 119 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 34588889999999999999995 46789999998643 233456799999999999999999999999999999999
Q ss_pred EcccCCCcHHHHHhcCCC--------------CCCCHHHHccccC
Q 004275 734 YEYLENNSLARALFGNAI--------------TKITYTFSLHLWN 764 (764)
Q Consensus 734 ~Ey~~~GsL~~~L~~~~~--------------~~l~~~~~~~i~h 764 (764)
|||+++|+|.+++..... .++.+.|..+|+|
T Consensus 120 ~e~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH 164 (335)
T 2owb_A 120 LELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIH 164 (335)
T ss_dssp ECCCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred EecCCCCCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCEe
Confidence 999999999999865321 3577888888887
No 261
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=99.22 E-value=7.7e-12 Score=141.15 Aligned_cols=106 Identities=20% Similarity=0.356 Sum_probs=91.1
Q ss_pred cCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCc--ChhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEEc
Q 004275 659 NNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSK--SKQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVYE 735 (764)
Q Consensus 659 ~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E 735 (764)
+.|...+.||+|+||.||+|+. .+++.||||++... .....+.+.+|++++++++|||||++++++...+..++|||
T Consensus 22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 101 (486)
T 3mwu_A 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGE 101 (486)
T ss_dssp HHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred cceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEE
Confidence 4588899999999999999995 47899999998642 22345789999999999999999999999999999999999
Q ss_pred ccCCCcHHHHHhcCCC--------------CCCCHHHHccccC
Q 004275 736 YLENNSLARALFGNAI--------------TKITYTFSLHLWN 764 (764)
Q Consensus 736 y~~~GsL~~~L~~~~~--------------~~l~~~~~~~i~h 764 (764)
||++|+|.+++..... .++.|.|..+|+|
T Consensus 102 ~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH 144 (486)
T 3mwu_A 102 LYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVH 144 (486)
T ss_dssp CCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred cCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEe
Confidence 9999999998865321 3588999999998
No 262
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=99.22 E-value=6.2e-12 Score=134.68 Aligned_cols=106 Identities=22% Similarity=0.347 Sum_probs=89.2
Q ss_pred hcCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcC---hhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEE
Q 004275 658 TNNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKS---KQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLV 733 (764)
Q Consensus 658 ~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv 733 (764)
.+.|...+.||+|+||.||+|.. .+++.||||.+.... ....+.+.+|+++++.++|||||++++++...+..++|
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 87 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMV 87 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 35688899999999999999995 678999999986432 12245789999999999999999999999999999999
Q ss_pred EcccCCCcHHHHHhcCCC--------------CCCCHHHHccccC
Q 004275 734 YEYLENNSLARALFGNAI--------------TKITYTFSLHLWN 764 (764)
Q Consensus 734 ~Ey~~~GsL~~~L~~~~~--------------~~l~~~~~~~i~h 764 (764)
|||+ +|+|.+++..... .++.|.|+.+|+|
T Consensus 88 ~E~~-~g~l~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH 131 (336)
T 3h4j_B 88 IEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVH 131 (336)
T ss_dssp ECCC-CEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred EECC-CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEe
Confidence 9999 6899999865321 3578888888888
No 263
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=99.22 E-value=1e-11 Score=133.78 Aligned_cols=104 Identities=25% Similarity=0.447 Sum_probs=86.5
Q ss_pred CccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcC---hhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEEc
Q 004275 660 NFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKS---KQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVYE 735 (764)
Q Consensus 660 ~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E 735 (764)
.|...+.||+|+||.||+|+. .+|+.||||++.... ....++|.+|++++++++|||||++++++...+..++|||
T Consensus 55 ~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 134 (348)
T 1u5q_A 55 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME 134 (348)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred heeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEEe
Confidence 377889999999999999994 678999999996532 2234679999999999999999999999999999999999
Q ss_pred ccCCCcHHHHHhcCCC---------------CCCCHHHHccccC
Q 004275 736 YLENNSLARALFGNAI---------------TKITYTFSLHLWN 764 (764)
Q Consensus 736 y~~~GsL~~~L~~~~~---------------~~l~~~~~~~i~h 764 (764)
|++ |+|.+++..... .++.+.|..+|+|
T Consensus 135 ~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH 177 (348)
T 1u5q_A 135 YCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIH 177 (348)
T ss_dssp CCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBC
T ss_pred cCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeee
Confidence 998 688888853211 2477788888887
No 264
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=99.22 E-value=1.1e-11 Score=129.95 Aligned_cols=107 Identities=16% Similarity=0.251 Sum_probs=89.8
Q ss_pred hcCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcC---------hhcHHHHHHHHHHHHhCC-CCCccceEEEEEE
Q 004275 658 TNNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKS---------KQGNREFVNEIGMISALQ-HQNLVKLYGCCIE 726 (764)
Q Consensus 658 ~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~---------~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~ 726 (764)
.++|...+.||+|+||.||+|.. .+|+.||||.+.... ....+.+.+|++++.+++ ||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 95 (298)
T 1phk_A 16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET 95 (298)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred hhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeecc
Confidence 46788999999999999999996 468899999996432 112356889999999996 9999999999999
Q ss_pred CCEEEEEEcccCCCcHHHHHhcCCC--------------CCCCHHHHccccC
Q 004275 727 GNQLLLVYEYLENNSLARALFGNAI--------------TKITYTFSLHLWN 764 (764)
Q Consensus 727 ~~~~~lv~Ey~~~GsL~~~L~~~~~--------------~~l~~~~~~~i~h 764 (764)
.+..++||||+++|+|.+++..... .++.+.|..+|+|
T Consensus 96 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H 147 (298)
T 1phk_A 96 NTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVH 147 (298)
T ss_dssp SSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred CCeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 9999999999999999999975421 3477888888887
No 265
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=99.22 E-value=9.6e-12 Score=132.83 Aligned_cols=106 Identities=24% Similarity=0.452 Sum_probs=87.6
Q ss_pred hcCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcChh--cHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEE
Q 004275 658 TNNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKSKQ--GNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVY 734 (764)
Q Consensus 658 ~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~--~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 734 (764)
.++|...+.||+|+||.||+|+. .+++.||||++...... ..+.+.+|++++++++|||||++++++...+..++||
T Consensus 33 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 112 (329)
T 3gbz_A 33 IDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIF 112 (329)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEEE
Confidence 45688899999999999999984 57889999999754322 2456889999999999999999999999999999999
Q ss_pred cccCCCcHHHHHhcCCC--------------CCCCHHHHccccC
Q 004275 735 EYLENNSLARALFGNAI--------------TKITYTFSLHLWN 764 (764)
Q Consensus 735 Ey~~~GsL~~~L~~~~~--------------~~l~~~~~~~i~h 764 (764)
||++ |+|.+++..... .++.|.|..+|+|
T Consensus 113 e~~~-~~L~~~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~ivH 155 (329)
T 3gbz_A 113 EYAE-NDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLH 155 (329)
T ss_dssp ECCS-EEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred ecCC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCEEC
Confidence 9999 599999976532 3578889999988
No 266
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=99.22 E-value=5.2e-12 Score=131.90 Aligned_cols=107 Identities=23% Similarity=0.452 Sum_probs=90.8
Q ss_pred hhcCccccCeeeccCCeeEEEEEEc-CCCEEEEEEcCCcChhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEEc
Q 004275 657 ATNNFDAANKIGEGGFGPVYKGTLS-DGAVIAVKQLSSKSKQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVYE 735 (764)
Q Consensus 657 ~~~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E 735 (764)
..++|...+.||+|+||.||+|... ++..||||.+..... ..++|.+|++++++++||||+++++++...+..++|||
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 89 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE 89 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCST-HHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCHH-HHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEE
Confidence 4566888999999999999999964 578899999975432 45689999999999999999999999999899999999
Q ss_pred ccCCCcHHHHHhcCCC----------------CCCCHHHHccccC
Q 004275 736 YLENNSLARALFGNAI----------------TKITYTFSLHLWN 764 (764)
Q Consensus 736 y~~~GsL~~~L~~~~~----------------~~l~~~~~~~i~h 764 (764)
|+++|+|.+++..... .++.+.|..+|+|
T Consensus 90 ~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H 134 (288)
T 3kfa_A 90 FMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH 134 (288)
T ss_dssp CCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred cCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCCccC
Confidence 9999999999976432 2466777777777
No 267
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=99.22 E-value=9.4e-12 Score=136.56 Aligned_cols=106 Identities=20% Similarity=0.273 Sum_probs=88.4
Q ss_pred cCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcC-hhcHHHHHHHHHHHHhCCCCCccceEEEEEECC--EEEEEE
Q 004275 659 NNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKS-KQGNREFVNEIGMISALQHQNLVKLYGCCIEGN--QLLLVY 734 (764)
Q Consensus 659 ~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~--~~~lv~ 734 (764)
+.|...+.||+|+||.||+|+. .+|+.||||++.... ....+.+.+|++++++++|||||++++++...+ ..++||
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~ 88 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEE
Confidence 4588889999999999999996 458999999997543 234567899999999999999999999998765 679999
Q ss_pred cccCCCcHHHHHhcCCC-----------------CCCCHHHHccccC
Q 004275 735 EYLENNSLARALFGNAI-----------------TKITYTFSLHLWN 764 (764)
Q Consensus 735 Ey~~~GsL~~~L~~~~~-----------------~~l~~~~~~~i~h 764 (764)
|||++|+|.+++..... .++.|.|..+|+|
T Consensus 89 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH 135 (396)
T 4eut_A 89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVH 135 (396)
T ss_dssp CCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred ecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEEE
Confidence 99999999999975321 2467788888877
No 268
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=99.22 E-value=7.5e-12 Score=132.29 Aligned_cols=101 Identities=35% Similarity=0.604 Sum_probs=84.2
Q ss_pred cCccccCeeeccCCeeEEEEEEcCCCEEEEEEcCCcChhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEEcccC
Q 004275 659 NNFDAANKIGEGGFGPVYKGTLSDGAVIAVKQLSSKSKQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVYEYLE 738 (764)
Q Consensus 659 ~~~~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~ 738 (764)
++|+..+.||+|+||.||+|+.. ++.||||++.... ..+.|.+|++++++++|||||++++++. +..++||||++
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~~~ 82 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESES--ERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAE 82 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSSTT--HHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEECCT
T ss_pred hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecChh--HHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEcCC
Confidence 45778899999999999999874 7889999996542 3568999999999999999999999886 45799999999
Q ss_pred CCcHHHHHhcCCC-----------------CCCCHHHH---ccccC
Q 004275 739 NNSLARALFGNAI-----------------TKITYTFS---LHLWN 764 (764)
Q Consensus 739 ~GsL~~~L~~~~~-----------------~~l~~~~~---~~i~h 764 (764)
+|+|.++++.... .++.+.|. .+|+|
T Consensus 83 ~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH 128 (307)
T 2eva_A 83 GGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIH 128 (307)
T ss_dssp TCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCC
T ss_pred CCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeec
Confidence 9999999986532 24666777 66777
No 269
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=99.22 E-value=5.6e-12 Score=131.08 Aligned_cols=107 Identities=23% Similarity=0.429 Sum_probs=89.6
Q ss_pred hcCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcC---hhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEE
Q 004275 658 TNNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKS---KQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLV 733 (764)
Q Consensus 658 ~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv 733 (764)
.++|...+.||+|+||.||+|.. .+++.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 87 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 87 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence 45688899999999999999985 467799999986432 22346789999999999999999999999999999999
Q ss_pred EcccCCCcHHHHHhcCCC--------------CCCCHHHHccccC
Q 004275 734 YEYLENNSLARALFGNAI--------------TKITYTFSLHLWN 764 (764)
Q Consensus 734 ~Ey~~~GsL~~~L~~~~~--------------~~l~~~~~~~i~h 764 (764)
|||+++|+|.+++..... .++.+.|..+|+|
T Consensus 88 ~e~~~~~~l~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H 132 (279)
T 3fdn_A 88 LEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 132 (279)
T ss_dssp ECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTCEE
T ss_pred EecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEec
Confidence 999999999999875321 3477888888887
No 270
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=99.22 E-value=1.3e-11 Score=130.50 Aligned_cols=107 Identities=17% Similarity=0.188 Sum_probs=90.8
Q ss_pred hcCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcCh---hcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEE
Q 004275 658 TNNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKSK---QGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLV 733 (764)
Q Consensus 658 ~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv 733 (764)
.++|...+.||+|+||.||+|+. .+++.||||.+..... ...+.+.+|++++.+++||||+++++++...+..++|
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD 112 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence 36688999999999999999995 4788999999975422 2246799999999999999999999999999999999
Q ss_pred EcccCCCcHHHHHhcCCC--------------CCCCHHHHccccC
Q 004275 734 YEYLENNSLARALFGNAI--------------TKITYTFSLHLWN 764 (764)
Q Consensus 734 ~Ey~~~GsL~~~L~~~~~--------------~~l~~~~~~~i~h 764 (764)
|||+++|+|.+++..... .++.+.|..+|+|
T Consensus 113 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H 157 (309)
T 2h34_A 113 MRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATH 157 (309)
T ss_dssp EECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred EEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCCc
Confidence 999999999999975321 3477888888887
No 271
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=99.22 E-value=6.2e-12 Score=135.61 Aligned_cols=107 Identities=19% Similarity=0.232 Sum_probs=90.9
Q ss_pred hcCccccCeeeccCCeeEEEEEEc-CCCEEEEEEcCCcC---hhcHHHHHHHHHHHHhC-CCCCccceEEEEEECCEEEE
Q 004275 658 TNNFDAANKIGEGGFGPVYKGTLS-DGAVIAVKQLSSKS---KQGNREFVNEIGMISAL-QHQNLVKLYGCCIEGNQLLL 732 (764)
Q Consensus 658 ~~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~l 732 (764)
.++|+..+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|.+++..+ +||+|+++++++.+.+..|+
T Consensus 19 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 98 (353)
T 2i0e_A 19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF 98 (353)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEE
Confidence 467999999999999999999964 57899999996532 23456788999999987 79999999999999999999
Q ss_pred EEcccCCCcHHHHHhcCCC--------------CCCCHHHHccccC
Q 004275 733 VYEYLENNSLARALFGNAI--------------TKITYTFSLHLWN 764 (764)
Q Consensus 733 v~Ey~~~GsL~~~L~~~~~--------------~~l~~~~~~~i~h 764 (764)
||||+++|+|.+++..... .+|.+.|..+|+|
T Consensus 99 v~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givH 144 (353)
T 2i0e_A 99 VMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIY 144 (353)
T ss_dssp EEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBC
T ss_pred EEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEe
Confidence 9999999999999975321 3588899999998
No 272
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=99.22 E-value=4.2e-12 Score=133.51 Aligned_cols=107 Identities=24% Similarity=0.361 Sum_probs=83.3
Q ss_pred hcCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcCh--------------------------hcHHHHHHHHHHHH
Q 004275 658 TNNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKSK--------------------------QGNREFVNEIGMIS 710 (764)
Q Consensus 658 ~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~--------------------------~~~~~f~~E~~~l~ 710 (764)
.++|...+.||+|+||.||+|+. .+++.||||++..... ...+++.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 35688899999999999999985 5688999999864321 11246899999999
Q ss_pred hCCCCCccceEEEEEE--CCEEEEEEcccCCCcHHHHHhcCC-------------CCCCCHHHHccccC
Q 004275 711 ALQHQNLVKLYGCCIE--GNQLLLVYEYLENNSLARALFGNA-------------ITKITYTFSLHLWN 764 (764)
Q Consensus 711 ~l~H~niv~l~g~~~~--~~~~~lv~Ey~~~GsL~~~L~~~~-------------~~~l~~~~~~~i~h 764 (764)
+++|||||++++++.. .+..++||||+++|+|.+++.... ..++.|.|..+|+|
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH 160 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQARFYFQDLIKGIEYLHYQKIIH 160 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCSSCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 9999999999999987 567899999999999877644321 13577888888887
No 273
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=99.22 E-value=6e-12 Score=139.17 Aligned_cols=107 Identities=17% Similarity=0.277 Sum_probs=87.1
Q ss_pred hhcCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcCh--------hcHHHHHHHHHHHHhCCCCCccceEEEEEEC
Q 004275 657 ATNNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKSK--------QGNREFVNEIGMISALQHQNLVKLYGCCIEG 727 (764)
Q Consensus 657 ~~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~--------~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~ 727 (764)
..+.|...+.||+|+||.||+|.. .+++.||||.+..... .....+.+|++++++++|||||++++++. .
T Consensus 133 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~-~ 211 (419)
T 3i6u_A 133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-A 211 (419)
T ss_dssp HHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-S
T ss_pred hhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-c
Confidence 456799999999999999999985 5688999999864321 11235889999999999999999999975 5
Q ss_pred CEEEEEEcccCCCcHHHHHhcCCC--------------CCCCHHHHccccC
Q 004275 728 NQLLLVYEYLENNSLARALFGNAI--------------TKITYTFSLHLWN 764 (764)
Q Consensus 728 ~~~~lv~Ey~~~GsL~~~L~~~~~--------------~~l~~~~~~~i~h 764 (764)
+..++|||||++|+|.+++..... .++.|.|..+|+|
T Consensus 212 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH 262 (419)
T 3i6u_A 212 EDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIH 262 (419)
T ss_dssp SEEEEEEECCTTCBGGGGTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred CceEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 668999999999999988865432 3578888888888
No 274
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=99.22 E-value=1.8e-11 Score=128.27 Aligned_cols=105 Identities=22% Similarity=0.417 Sum_probs=86.5
Q ss_pred cCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcC--hhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEEc
Q 004275 659 NNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKS--KQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVYE 735 (764)
Q Consensus 659 ~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E 735 (764)
++|+..+.||+|+||+||+|+. .+++.||||++.... ....+.+.+|++++.+++|||||++++++...+..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 4688889999999999999995 468999999996432 2234678999999999999999999999999999999999
Q ss_pred ccCCCcHHHHHhcCCC---------------CCCCHHHHccccC
Q 004275 736 YLENNSLARALFGNAI---------------TKITYTFSLHLWN 764 (764)
Q Consensus 736 y~~~GsL~~~L~~~~~---------------~~l~~~~~~~i~h 764 (764)
|+++ ++.+++..... .++.+.|..+|+|
T Consensus 82 ~~~~-~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~ivH 124 (292)
T 3o0g_A 82 FCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLH 124 (292)
T ss_dssp CCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred cCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 9986 56666544211 3578888888888
No 275
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=99.22 E-value=6e-12 Score=133.46 Aligned_cols=107 Identities=20% Similarity=0.288 Sum_probs=87.0
Q ss_pred hcCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcChhcHHHHHHHHHHHHhCCCCCccceEEEEEE----CCEEEE
Q 004275 658 TNNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKSKQGNREFVNEIGMISALQHQNLVKLYGCCIE----GNQLLL 732 (764)
Q Consensus 658 ~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~----~~~~~l 732 (764)
.++|...+.||+|+||.||+++. .+++.||||++........+.+.+|++++.+++|||||++++++.. ....++
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 107 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWL 107 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEE
Confidence 35688899999999999999995 6789999999976555566789999999999999999999999973 347899
Q ss_pred EEcccCCCcHHHHHhcC--CC----------------CCCCHHHHccccC
Q 004275 733 VYEYLENNSLARALFGN--AI----------------TKITYTFSLHLWN 764 (764)
Q Consensus 733 v~Ey~~~GsL~~~L~~~--~~----------------~~l~~~~~~~i~h 764 (764)
||||+++|+|.+++... .. .++.+.|..+|+|
T Consensus 108 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH 157 (317)
T 2buj_A 108 LLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAH 157 (317)
T ss_dssp EEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred EEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 99999999999999752 11 2466777777777
No 276
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.21 E-value=1.9e-11 Score=130.77 Aligned_cols=106 Identities=25% Similarity=0.494 Sum_probs=87.7
Q ss_pred cCccccCeeeccCCeeEEEEEEcC-----CCEEEEEEcCCcC-hhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEE
Q 004275 659 NNFDAANKIGEGGFGPVYKGTLSD-----GAVIAVKQLSSKS-KQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLL 732 (764)
Q Consensus 659 ~~~~~~~~iG~G~~g~Vy~~~~~~-----g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 732 (764)
+.|...+.||+|+||.||+|.... +..||||.+.... .....+|.+|++++.+++|||||++++++...+..++
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 123 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI 123 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEE
Confidence 456778899999999999998542 2369999997543 3345679999999999999999999999998899999
Q ss_pred EEcccCCCcHHHHHhcCCC---------------CCCCHHHHccccC
Q 004275 733 VYEYLENNSLARALFGNAI---------------TKITYTFSLHLWN 764 (764)
Q Consensus 733 v~Ey~~~GsL~~~L~~~~~---------------~~l~~~~~~~i~h 764 (764)
||||+++|+|.+++..... .++.+.|..+|+|
T Consensus 124 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH 170 (333)
T 1mqb_A 124 ITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVH 170 (333)
T ss_dssp EEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred EEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeC
Confidence 9999999999999976421 2467788888887
No 277
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=99.21 E-value=8.8e-12 Score=133.89 Aligned_cols=103 Identities=17% Similarity=0.343 Sum_probs=87.2
Q ss_pred hcCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcChhcHHHHHHHHHHHHhC-CCCCccceEEEEEECCEEEEEEc
Q 004275 658 TNNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKSKQGNREFVNEIGMISAL-QHQNLVKLYGCCIEGNQLLLVYE 735 (764)
Q Consensus 658 ~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~E 735 (764)
.++|...+.||+|+||.||+|+. .+|+.||||.+..... .+.+|++++.++ +|||||++++++.+.+..++|||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E 96 (342)
T 2qr7_A 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTE 96 (342)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEEC
T ss_pred cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEe
Confidence 45588889999999999999995 4688999999965432 245788888887 79999999999999999999999
Q ss_pred ccCCCcHHHHHhcCCC--------------CCCCHHHHccccC
Q 004275 736 YLENNSLARALFGNAI--------------TKITYTFSLHLWN 764 (764)
Q Consensus 736 y~~~GsL~~~L~~~~~--------------~~l~~~~~~~i~h 764 (764)
||++|+|.+++..... .++.+.|..+|+|
T Consensus 97 ~~~gg~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~givH 139 (342)
T 2qr7_A 97 LMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVH 139 (342)
T ss_dssp CCCSCBHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred CCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEe
Confidence 9999999999976532 3578889999888
No 278
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=99.21 E-value=1.2e-11 Score=129.78 Aligned_cols=106 Identities=24% Similarity=0.475 Sum_probs=88.5
Q ss_pred hcCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcChhcHHHHHHHHHHHHhCCCCCccceEEEEEE----------
Q 004275 658 TNNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKSKQGNREFVNEIGMISALQHQNLVKLYGCCIE---------- 726 (764)
Q Consensus 658 ~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~---------- 726 (764)
.++|+..+.||+|+||.||+|+. .+++.||||++... ....+.+.+|++++.+++||||+++++++..
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTA 83 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC----
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcc
Confidence 34588899999999999999995 57899999999543 2345679999999999999999999999875
Q ss_pred ---CCEEEEEEcccCCCcHHHHHhcCCC---------------CCCCHHHHccccC
Q 004275 727 ---GNQLLLVYEYLENNSLARALFGNAI---------------TKITYTFSLHLWN 764 (764)
Q Consensus 727 ---~~~~~lv~Ey~~~GsL~~~L~~~~~---------------~~l~~~~~~~i~h 764 (764)
.+..++||||+++|+|.+++..... .++.+.|..+|+|
T Consensus 84 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H 139 (303)
T 1zy4_A 84 VKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIH 139 (303)
T ss_dssp --CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred cccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhCCeec
Confidence 3567999999999999999975421 2477888888888
No 279
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=99.21 E-value=9.3e-12 Score=142.08 Aligned_cols=107 Identities=26% Similarity=0.486 Sum_probs=90.8
Q ss_pred HhhcCccccCeeeccCCeeEEEEEEcCCCEEEEEEcCCcChhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEEc
Q 004275 656 AATNNFDAANKIGEGGFGPVYKGTLSDGAVIAVKQLSSKSKQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVYE 735 (764)
Q Consensus 656 ~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E 735 (764)
...++|...+.||+|+||.||+|...++..||||++.... ...++|.+|+++|++++|+|||+++++|.+ +..++|||
T Consensus 264 i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e 341 (535)
T 2h8h_A 264 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTE 341 (535)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEC
T ss_pred cchhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeee
Confidence 3456688899999999999999999888889999997643 245689999999999999999999999865 67899999
Q ss_pred ccCCCcHHHHHhcCC----------------CCCCCHHHHccccC
Q 004275 736 YLENNSLARALFGNA----------------ITKITYTFSLHLWN 764 (764)
Q Consensus 736 y~~~GsL~~~L~~~~----------------~~~l~~~~~~~i~h 764 (764)
||++|+|.++|+... ..+|.|.|..+|+|
T Consensus 342 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH 386 (535)
T 2h8h_A 342 YMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVH 386 (535)
T ss_dssp CCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred hhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeC
Confidence 999999999997421 13578888888888
No 280
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=99.21 E-value=1.1e-11 Score=131.09 Aligned_cols=100 Identities=21% Similarity=0.431 Sum_probs=82.5
Q ss_pred HHHHHHhhcCccccCeeeccCCeeEEEEEE------cCCCEEEEEEcCCcC-hhcHHHHHHHHHHHHhC-CCCCccceEE
Q 004275 651 LRQIKAATNNFDAANKIGEGGFGPVYKGTL------SDGAVIAVKQLSSKS-KQGNREFVNEIGMISAL-QHQNLVKLYG 722 (764)
Q Consensus 651 ~~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~------~~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l-~H~niv~l~g 722 (764)
..++....++|...+.||+|+||.||+|+. .+++.||||.+.... ....+.+.+|++++.++ +||||+++++
T Consensus 19 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~ 98 (316)
T 2xir_A 19 ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG 98 (316)
T ss_dssp HHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred ccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEE
Confidence 344444567799999999999999999984 346789999997643 33456799999999999 7999999999
Q ss_pred EEEECC-EEEEEEcccCCCcHHHHHhcCC
Q 004275 723 CCIEGN-QLLLVYEYLENNSLARALFGNA 750 (764)
Q Consensus 723 ~~~~~~-~~~lv~Ey~~~GsL~~~L~~~~ 750 (764)
++...+ ..++||||+++|+|.+++....
T Consensus 99 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~ 127 (316)
T 2xir_A 99 ACTKPGGPLMVIVEFCKFGNLSTYLRSKR 127 (316)
T ss_dssp EECCTTSCCEEEEECCTTEEHHHHHHTCT
T ss_pred EEecCCCceEEEEEcCCCCcHHHHHHhcc
Confidence 998754 4899999999999999998653
No 281
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=99.21 E-value=1.5e-11 Score=133.37 Aligned_cols=104 Identities=19% Similarity=0.254 Sum_probs=86.4
Q ss_pred hcCccccCeeeccCCeeEEEEE------EcCCCEEEEEEcCCcChhcHHHHHHHHHHHHhCC---CCCccceEEEEEECC
Q 004275 658 TNNFDAANKIGEGGFGPVYKGT------LSDGAVIAVKQLSSKSKQGNREFVNEIGMISALQ---HQNLVKLYGCCIEGN 728 (764)
Q Consensus 658 ~~~~~~~~~iG~G~~g~Vy~~~------~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~---H~niv~l~g~~~~~~ 728 (764)
.+.|...+.||+|+||.||+|+ ..+++.||||++... ...++.+|++++.+++ |+||+++++++...+
T Consensus 64 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~ 140 (365)
T 3e7e_A 64 SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA---NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQN 140 (365)
T ss_dssp SSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC---CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSS
T ss_pred CEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC---ChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCC
Confidence 4568888999999999999994 457889999999764 3457888888888887 999999999999999
Q ss_pred EEEEEEcccCCCcHHHHHhcC-----CC--------------CCCCHHHHccccC
Q 004275 729 QLLLVYEYLENNSLARALFGN-----AI--------------TKITYTFSLHLWN 764 (764)
Q Consensus 729 ~~~lv~Ey~~~GsL~~~L~~~-----~~--------------~~l~~~~~~~i~h 764 (764)
..++|||||++|+|.++++.. .. .+|.|.|..+|+|
T Consensus 141 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivH 195 (365)
T 3e7e_A 141 GSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIH 195 (365)
T ss_dssp CEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEEC
T ss_pred CcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeec
Confidence 999999999999999999731 10 2477788888887
No 282
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=99.21 E-value=2.3e-11 Score=126.60 Aligned_cols=106 Identities=23% Similarity=0.328 Sum_probs=86.8
Q ss_pred hcCccccCeeeccCCeeEEEEEEc----CCCEEEEEEcCCcC-hhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEE
Q 004275 658 TNNFDAANKIGEGGFGPVYKGTLS----DGAVIAVKQLSSKS-KQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLL 732 (764)
Q Consensus 658 ~~~~~~~~~iG~G~~g~Vy~~~~~----~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 732 (764)
.+.|+..+.||+|+||.||+|... .+..||||.+.... ....+.|.+|++++++++|||||++++++ ..+..++
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-~~~~~~l 92 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWI 92 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-CSSSCEE
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEE-ccCccEE
Confidence 356888899999999999999863 24579999997543 33456799999999999999999999998 4567899
Q ss_pred EEcccCCCcHHHHHhcCCC---------------CCCCHHHHccccC
Q 004275 733 VYEYLENNSLARALFGNAI---------------TKITYTFSLHLWN 764 (764)
Q Consensus 733 v~Ey~~~GsL~~~L~~~~~---------------~~l~~~~~~~i~h 764 (764)
||||+++|+|.+++..... .++.+.|..+|+|
T Consensus 93 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H 139 (281)
T 1mp8_A 93 IMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVH 139 (281)
T ss_dssp EEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred EEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 9999999999999975431 2467788888887
No 283
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=99.20 E-value=1.9e-11 Score=132.31 Aligned_cols=114 Identities=19% Similarity=0.335 Sum_probs=93.8
Q ss_pred cHHHHHHhhcCccccCeeeccCCeeEEEEEEcCCCEEEEEEcCCcCh-----------hcHHHHHHHHHHHHhCCCCCcc
Q 004275 650 TLRQIKAATNNFDAANKIGEGGFGPVYKGTLSDGAVIAVKQLSSKSK-----------QGNREFVNEIGMISALQHQNLV 718 (764)
Q Consensus 650 ~~~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~-----------~~~~~f~~E~~~l~~l~H~niv 718 (764)
...++....+.|...+.||+|+||.||+|...+|+.||||++..... ...+.+.+|++++.+++|||||
T Consensus 13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv 92 (362)
T 3pg1_A 13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNIL 92 (362)
T ss_dssp HHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred HHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcc
Confidence 34667778899999999999999999999987899999999854221 1136799999999999999999
Q ss_pred ceEEEEEEC-----CEEEEEEcccCCCcHHHHHhcCCC---------------CCCCHHHHccccC
Q 004275 719 KLYGCCIEG-----NQLLLVYEYLENNSLARALFGNAI---------------TKITYTFSLHLWN 764 (764)
Q Consensus 719 ~l~g~~~~~-----~~~~lv~Ey~~~GsL~~~L~~~~~---------------~~l~~~~~~~i~h 764 (764)
++++++... ...++||||++ |+|.+++..... .++.|.|..+|+|
T Consensus 93 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH 157 (362)
T 3pg1_A 93 GLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVH 157 (362)
T ss_dssp CCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred ceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCcCEe
Confidence 999999653 35799999999 689999876531 2477888888888
No 284
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.20 E-value=3.1e-11 Score=126.08 Aligned_cols=104 Identities=26% Similarity=0.455 Sum_probs=84.5
Q ss_pred CccccC-eeeccCCeeEEEEEEc---CCCEEEEEEcCCcC-hhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEE
Q 004275 660 NFDAAN-KIGEGGFGPVYKGTLS---DGAVIAVKQLSSKS-KQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVY 734 (764)
Q Consensus 660 ~~~~~~-~iG~G~~g~Vy~~~~~---~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 734 (764)
+|.... .||+|+||.||+|+.. ++..||||.+.... ....+++.+|++++.+++||||+++++++ ..+..++||
T Consensus 10 ~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv~ 88 (287)
T 1u59_A 10 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVM 88 (287)
T ss_dssp GEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEEE
T ss_pred HhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEEE
Confidence 344554 8999999999999853 67789999997643 33457899999999999999999999999 567789999
Q ss_pred cccCCCcHHHHHhcCCC---------------CCCCHHHHccccC
Q 004275 735 EYLENNSLARALFGNAI---------------TKITYTFSLHLWN 764 (764)
Q Consensus 735 Ey~~~GsL~~~L~~~~~---------------~~l~~~~~~~i~h 764 (764)
||+++|+|.+++..... .++.+.|..+|+|
T Consensus 89 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H 133 (287)
T 1u59_A 89 EMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVH 133 (287)
T ss_dssp ECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred EeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHCCEee
Confidence 99999999999965432 2466777777776
No 285
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=99.20 E-value=2.3e-11 Score=131.88 Aligned_cols=110 Identities=15% Similarity=0.261 Sum_probs=91.2
Q ss_pred HHhhcCccccCeeeccCCeeEEEEEEc-CCCEEEEEEcCCcCh--------hcHHHHHHHHHHHHhC-CCCCccceEEEE
Q 004275 655 KAATNNFDAANKIGEGGFGPVYKGTLS-DGAVIAVKQLSSKSK--------QGNREFVNEIGMISAL-QHQNLVKLYGCC 724 (764)
Q Consensus 655 ~~~~~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~~--------~~~~~f~~E~~~l~~l-~H~niv~l~g~~ 724 (764)
....++|...+.||+|+||.||+|+.. +|+.||||++..... ...+.+.+|+.++.++ +||||+++++++
T Consensus 90 ~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~ 169 (365)
T 2y7j_A 90 KEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSY 169 (365)
T ss_dssp HHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred hhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEE
Confidence 344566888999999999999999974 799999999865321 1135688999999999 799999999999
Q ss_pred EECCEEEEEEcccCCCcHHHHHhcCCC--------------CCCCHHHHccccC
Q 004275 725 IEGNQLLLVYEYLENNSLARALFGNAI--------------TKITYTFSLHLWN 764 (764)
Q Consensus 725 ~~~~~~~lv~Ey~~~GsL~~~L~~~~~--------------~~l~~~~~~~i~h 764 (764)
...+..++||||+++|+|.+++..... .++.|.|+.+|+|
T Consensus 170 ~~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~gi~H 223 (365)
T 2y7j_A 170 ESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIVH 223 (365)
T ss_dssp EBSSEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred eeCCEEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 999999999999999999999975321 3577888888887
No 286
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.20 E-value=1.3e-11 Score=129.78 Aligned_cols=102 Identities=27% Similarity=0.429 Sum_probs=81.3
Q ss_pred cCccccCeeeccCCeeEEEEEEcCCCEEEEEEcCCcChhcHHHHHHHHHHHHh--CCCCCccceEEEEEECC----EEEE
Q 004275 659 NNFDAANKIGEGGFGPVYKGTLSDGAVIAVKQLSSKSKQGNREFVNEIGMISA--LQHQNLVKLYGCCIEGN----QLLL 732 (764)
Q Consensus 659 ~~~~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~--l~H~niv~l~g~~~~~~----~~~l 732 (764)
+.|...+.||+|+||.||+|+. +|+.||||++... ..+++.+|.+++.. ++||||+++++++...+ ..++
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~l 78 (303)
T 3gxj_A 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL 78 (303)
T ss_dssp GGCCCCEEEEECSSSEEEEC-C-TTSCEEEEECC-T---THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEE
T ss_pred ceeeehhhccCCCCeEEEEEEE-cCcceEEEEeccc---chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEE
Confidence 4578889999999999999986 4889999999653 34578889998887 79999999999998876 7899
Q ss_pred EEcccCCCcHHHHHhcCCC-------------CCCCHHH--------HccccC
Q 004275 733 VYEYLENNSLARALFGNAI-------------TKITYTF--------SLHLWN 764 (764)
Q Consensus 733 v~Ey~~~GsL~~~L~~~~~-------------~~l~~~~--------~~~i~h 764 (764)
||||+++|+|.+++..... .++.|.| ..+|+|
T Consensus 79 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH 131 (303)
T 3gxj_A 79 VSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAH 131 (303)
T ss_dssp EEECCTTCCHHHHHHHCCBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCC
T ss_pred EEeccCCCCHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEee
Confidence 9999999999999975421 2467777 777877
No 287
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=99.20 E-value=2.1e-11 Score=126.43 Aligned_cols=105 Identities=22% Similarity=0.414 Sum_probs=79.2
Q ss_pred cCccccCeeeccCCeeEEEEE-EcCCCEEEEEEcCCcC---hhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEE
Q 004275 659 NNFDAANKIGEGGFGPVYKGT-LSDGAVIAVKQLSSKS---KQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVY 734 (764)
Q Consensus 659 ~~~~~~~~iG~G~~g~Vy~~~-~~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 734 (764)
++|+..+.||+|+||.||+|+ ..+|+.||||++.... ....+.+.+|++++++++||||+++++++...+..++||
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEE
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEe
Confidence 568889999999999999998 4678999999997542 223567899999999999999999999999999999999
Q ss_pred cccCCCcHHHHHhcCCC--------------CCCCHHHHccccC
Q 004275 735 EYLENNSLARALFGNAI--------------TKITYTFSLHLWN 764 (764)
Q Consensus 735 Ey~~~GsL~~~L~~~~~--------------~~l~~~~~~~i~h 764 (764)
||+ +|+|.+++..... .++.+.|..+|+|
T Consensus 93 e~~-~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H 135 (275)
T 2eue_A 93 EYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVH 135 (275)
T ss_dssp ECC-CEEHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred hhc-CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCee
Confidence 999 6788888875432 3477888888887
No 288
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=99.20 E-value=6e-12 Score=136.78 Aligned_cols=106 Identities=25% Similarity=0.386 Sum_probs=81.3
Q ss_pred cCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcC---hhcHHHHHHHHHH-HHhCCCCCccceEEEEEECCEEEEE
Q 004275 659 NNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKS---KQGNREFVNEIGM-ISALQHQNLVKLYGCCIEGNQLLLV 733 (764)
Q Consensus 659 ~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~f~~E~~~-l~~l~H~niv~l~g~~~~~~~~~lv 733 (764)
++|+..+.||+|+||.||+|+. .+++.||||++.... ....+.+.+|..+ ++.++|||||++++++.+.+..|+|
T Consensus 38 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv 117 (373)
T 2r5t_A 38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFV 117 (373)
T ss_dssp GGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEE
Confidence 4588899999999999999996 468899999996532 2234567778776 5678999999999999999999999
Q ss_pred EcccCCCcHHHHHhcCCC--------------CCCCHHHHccccC
Q 004275 734 YEYLENNSLARALFGNAI--------------TKITYTFSLHLWN 764 (764)
Q Consensus 734 ~Ey~~~GsL~~~L~~~~~--------------~~l~~~~~~~i~h 764 (764)
|||+++|+|.+++..... .+|.|.|..+|+|
T Consensus 118 ~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givH 162 (373)
T 2r5t_A 118 LDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVY 162 (373)
T ss_dssp EECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcee
Confidence 999999999999975321 3588999999998
No 289
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=99.20 E-value=1.8e-11 Score=130.55 Aligned_cols=92 Identities=33% Similarity=0.580 Sum_probs=76.8
Q ss_pred cCccccCeeeccCCeeEEEEEE-cCCCE--EEEEEcCCc-ChhcHHHHHHHHHHHHhC-CCCCccceEEEEEECCEEEEE
Q 004275 659 NNFDAANKIGEGGFGPVYKGTL-SDGAV--IAVKQLSSK-SKQGNREFVNEIGMISAL-QHQNLVKLYGCCIEGNQLLLV 733 (764)
Q Consensus 659 ~~~~~~~~iG~G~~g~Vy~~~~-~~g~~--vAvK~l~~~-~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv 733 (764)
++|...+.||+|+||.||+|+. .++.. ||||.+... .....+.+.+|++++.++ +||||+++++++...+..++|
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 104 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 104 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence 4588889999999999999985 45664 499998653 233446799999999999 899999999999999999999
Q ss_pred EcccCCCcHHHHHhcCC
Q 004275 734 YEYLENNSLARALFGNA 750 (764)
Q Consensus 734 ~Ey~~~GsL~~~L~~~~ 750 (764)
|||+++|+|.+++....
T Consensus 105 ~e~~~~~~L~~~l~~~~ 121 (327)
T 1fvr_A 105 IEYAPHGNLLDFLRKSR 121 (327)
T ss_dssp ECCCTTCBHHHHHHTTC
T ss_pred EecCCCCCHHHHHHhcc
Confidence 99999999999997653
No 290
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=99.20 E-value=1.3e-11 Score=130.69 Aligned_cols=105 Identities=26% Similarity=0.302 Sum_probs=84.0
Q ss_pred cCccccCeeeccCCeeEEEEEEc-CCCEEEEEEcCCcC--hhcHHHHHHHHHHHHhC-CCCCccceEEEEEECCEEEEEE
Q 004275 659 NNFDAANKIGEGGFGPVYKGTLS-DGAVIAVKQLSSKS--KQGNREFVNEIGMISAL-QHQNLVKLYGCCIEGNQLLLVY 734 (764)
Q Consensus 659 ~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ 734 (764)
++|+..+.||+|+||+||+|+.. +|+.||||++.... .....++.+|+..+.++ +|+|||+++++|.+.+..++||
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~ 136 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT 136 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence 45889999999999999999964 78999999986532 23344566777766665 8999999999999999999999
Q ss_pred cccCCCcHHHHHhcCCC---------------CCCCHHHHccccC
Q 004275 735 EYLENNSLARALFGNAI---------------TKITYTFSLHLWN 764 (764)
Q Consensus 735 Ey~~~GsL~~~L~~~~~---------------~~l~~~~~~~i~h 764 (764)
||+ +|+|.+++..... .+|.|.|..+|+|
T Consensus 137 e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH 180 (311)
T 3p1a_A 137 ELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVH 180 (311)
T ss_dssp ECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred ecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEec
Confidence 999 6799998875321 2466777777777
No 291
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=99.20 E-value=1.7e-11 Score=130.26 Aligned_cols=108 Identities=20% Similarity=0.425 Sum_probs=81.2
Q ss_pred hhcCccccCeeeccCCeeEEEEEEc-CC---CEEEEEEcCCc--ChhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEE
Q 004275 657 ATNNFDAANKIGEGGFGPVYKGTLS-DG---AVIAVKQLSSK--SKQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQL 730 (764)
Q Consensus 657 ~~~~~~~~~~iG~G~~g~Vy~~~~~-~g---~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~ 730 (764)
..++|...+.||+|+||.||+|+.. ++ ..||||.+... .....++|.+|++++++++|||||++++++...+..
T Consensus 21 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 100 (323)
T 3qup_A 21 PEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAK 100 (323)
T ss_dssp C---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC---
T ss_pred ChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccc
Confidence 3566889999999999999999853 33 27999999754 233457899999999999999999999999877655
Q ss_pred ------EEEEcccCCCcHHHHHhcCC--------------------CCCCCHHHHccccC
Q 004275 731 ------LLVYEYLENNSLARALFGNA--------------------ITKITYTFSLHLWN 764 (764)
Q Consensus 731 ------~lv~Ey~~~GsL~~~L~~~~--------------------~~~l~~~~~~~i~h 764 (764)
++||||+++|+|.+++.... ..++.|.|..+|+|
T Consensus 101 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH 160 (323)
T 3qup_A 101 GRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIH 160 (323)
T ss_dssp ----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred cCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCccc
Confidence 99999999999999996421 02467788888887
No 292
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=99.19 E-value=8e-12 Score=133.53 Aligned_cols=94 Identities=32% Similarity=0.519 Sum_probs=80.5
Q ss_pred HHhhcCccccCeeeccCCeeEEEEEEc-CC-----CEEEEEEcCCcC-hhcHHHHHHHHHHHHhC-CCCCccceEEEEEE
Q 004275 655 KAATNNFDAANKIGEGGFGPVYKGTLS-DG-----AVIAVKQLSSKS-KQGNREFVNEIGMISAL-QHQNLVKLYGCCIE 726 (764)
Q Consensus 655 ~~~~~~~~~~~~iG~G~~g~Vy~~~~~-~g-----~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~ 726 (764)
....++|...+.||+|+||.||+|... ++ ..||||.+.... ....+.+.+|++++.++ +|||||++++++..
T Consensus 42 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 121 (333)
T 2i1m_A 42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTH 121 (333)
T ss_dssp BCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred cCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEec
Confidence 344577899999999999999999853 22 479999997643 33456799999999999 89999999999999
Q ss_pred CCEEEEEEcccCCCcHHHHHhc
Q 004275 727 GNQLLLVYEYLENNSLARALFG 748 (764)
Q Consensus 727 ~~~~~lv~Ey~~~GsL~~~L~~ 748 (764)
.+..++||||+++|+|.+++..
T Consensus 122 ~~~~~lv~e~~~~g~L~~~l~~ 143 (333)
T 2i1m_A 122 GGPVLVITEYCCYGDLLNFLRR 143 (333)
T ss_dssp SSSCEEEEECCTTEEHHHHHHH
T ss_pred CCceEEEEecCCCCcHHHHHHH
Confidence 9999999999999999999974
No 293
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=99.19 E-value=2.4e-11 Score=129.66 Aligned_cols=105 Identities=23% Similarity=0.466 Sum_probs=82.1
Q ss_pred cCccccCeeeccCCeeEEEEEE-cCCC----EEEEEEcCCc-ChhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEE
Q 004275 659 NNFDAANKIGEGGFGPVYKGTL-SDGA----VIAVKQLSSK-SKQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLL 732 (764)
Q Consensus 659 ~~~~~~~~iG~G~~g~Vy~~~~-~~g~----~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 732 (764)
++|+..+.||+|+||.||+|+. .+++ .||+|.+... .....++|.+|++++++++|||||+++++|... ..++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~~~~ 93 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL 93 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESS-SEEE
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecC-CeEE
Confidence 4588889999999999999984 3444 3688888643 234467899999999999999999999999865 4789
Q ss_pred EEcccCCCcHHHHHhcCCC---------------CCCCHHHHccccC
Q 004275 733 VYEYLENNSLARALFGNAI---------------TKITYTFSLHLWN 764 (764)
Q Consensus 733 v~Ey~~~GsL~~~L~~~~~---------------~~l~~~~~~~i~h 764 (764)
|+||+++|+|.++++.... .++.+.|..+|+|
T Consensus 94 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH 140 (327)
T 3poz_A 94 ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 140 (327)
T ss_dssp EEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred EEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCeeC
Confidence 9999999999999986431 2477888888888
No 294
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=99.19 E-value=4e-12 Score=133.70 Aligned_cols=108 Identities=19% Similarity=0.318 Sum_probs=74.9
Q ss_pred hhcCccccCeeeccCCeeEEEEE-EcCCCEEEEEEcCCcC-hhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEE
Q 004275 657 ATNNFDAANKIGEGGFGPVYKGT-LSDGAVIAVKQLSSKS-KQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVY 734 (764)
Q Consensus 657 ~~~~~~~~~~iG~G~~g~Vy~~~-~~~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 734 (764)
..++|...+.||+|+||.||+|. ..+++.||||++.... ....+++.+|++++.+++||||+++++++...+..++||
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (303)
T 2vwi_A 13 NRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVM 92 (303)
T ss_dssp CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEE
T ss_pred chhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEe
Confidence 45678899999999999999998 4578999999996543 234567899999999999999999999999999999999
Q ss_pred cccCCCcHHHHHhc--------CC--------------CCCCCHHHHccccC
Q 004275 735 EYLENNSLARALFG--------NA--------------ITKITYTFSLHLWN 764 (764)
Q Consensus 735 Ey~~~GsL~~~L~~--------~~--------------~~~l~~~~~~~i~h 764 (764)
||+++|+|.+++.. .. ..++.+.|..+|+|
T Consensus 93 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H 144 (303)
T 2vwi_A 93 KLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIH 144 (303)
T ss_dssp ECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred hhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 99999999999863 10 02467788888887
No 295
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=99.19 E-value=2.1e-11 Score=127.23 Aligned_cols=105 Identities=34% Similarity=0.539 Sum_probs=85.2
Q ss_pred hcCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcChhc-------HHHHHHHHHHHHhCCCCCccceEEEEEECCE
Q 004275 658 TNNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKSKQG-------NREFVNEIGMISALQHQNLVKLYGCCIEGNQ 729 (764)
Q Consensus 658 ~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~-------~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~ 729 (764)
.++|...+.||+|+||.||+|+. .+++.||||++....... .++|.+|++++.+++||||+++++++.+..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 96 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP- 96 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence 35688889999999999999996 578999999996533211 167999999999999999999999986544
Q ss_pred EEEEEcccCCCcHHHHHhcCCC---------------CCCCHHHHcc--ccC
Q 004275 730 LLLVYEYLENNSLARALFGNAI---------------TKITYTFSLH--LWN 764 (764)
Q Consensus 730 ~~lv~Ey~~~GsL~~~L~~~~~---------------~~l~~~~~~~--i~h 764 (764)
++||||+++|+|.+++..... .++.+.|..+ |+|
T Consensus 97 -~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH 147 (287)
T 4f0f_A 97 -RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVH 147 (287)
T ss_dssp -EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBC
T ss_pred -eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhCCCCeec
Confidence 799999999999999976532 2466777777 777
No 296
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=99.19 E-value=2.5e-11 Score=127.43 Aligned_cols=88 Identities=26% Similarity=0.471 Sum_probs=74.0
Q ss_pred hcCccccCeeeccCCeeEEEEEEcCCCEEEEEEcCCcChhcHHHHHHHHHHHHh--CCCCCccceEEEEEEC----CEEE
Q 004275 658 TNNFDAANKIGEGGFGPVYKGTLSDGAVIAVKQLSSKSKQGNREFVNEIGMISA--LQHQNLVKLYGCCIEG----NQLL 731 (764)
Q Consensus 658 ~~~~~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~--l~H~niv~l~g~~~~~----~~~~ 731 (764)
.++|...+.||+|+||.||+|+. +++.||||++... ..+.+.+|.+++.. ++||||+++++++... ...+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~ 82 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLW 82 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeE
Confidence 45688899999999999999987 6889999999653 34567778887776 7999999999997653 4579
Q ss_pred EEEcccCCCcHHHHHhcC
Q 004275 732 LVYEYLENNSLARALFGN 749 (764)
Q Consensus 732 lv~Ey~~~GsL~~~L~~~ 749 (764)
+||||+++|+|.++++..
T Consensus 83 lv~e~~~~g~L~~~l~~~ 100 (301)
T 3q4u_A 83 LITHYHEMGSLYDYLQLT 100 (301)
T ss_dssp EEECCCTTCBHHHHHTTC
T ss_pred EehhhccCCCHHHHHhhc
Confidence 999999999999999654
No 297
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=99.19 E-value=1.1e-11 Score=129.19 Aligned_cols=106 Identities=22% Similarity=0.427 Sum_probs=89.2
Q ss_pred cCccccCeeeccCCeeEEEEEEc-CCCEEEEEEcCCcC---hhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEE
Q 004275 659 NNFDAANKIGEGGFGPVYKGTLS-DGAVIAVKQLSSKS---KQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVY 734 (764)
Q Consensus 659 ~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 734 (764)
++|...+.||+|+||.||+|+.. +++.||||.+.... ....+.+.+|++++++++||||+++++++...+..++||
T Consensus 14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 93 (284)
T 2vgo_A 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLML 93 (284)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEE
Confidence 45888999999999999999964 67789999986432 223467999999999999999999999999999999999
Q ss_pred cccCCCcHHHHHhcCCC--------------CCCCHHHHccccC
Q 004275 735 EYLENNSLARALFGNAI--------------TKITYTFSLHLWN 764 (764)
Q Consensus 735 Ey~~~GsL~~~L~~~~~--------------~~l~~~~~~~i~h 764 (764)
||+++|+|.+++..... .++.+.|..+|+|
T Consensus 94 e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H 137 (284)
T 2vgo_A 94 EFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIH 137 (284)
T ss_dssp CCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEEC
T ss_pred EeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcee
Confidence 99999999999975321 3477888888887
No 298
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=99.19 E-value=2.6e-11 Score=137.60 Aligned_cols=106 Identities=18% Similarity=0.307 Sum_probs=90.2
Q ss_pred cCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcC---hhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEE
Q 004275 659 NNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKS---KQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVY 734 (764)
Q Consensus 659 ~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 734 (764)
++|...++||+|+||.||+|+. .+|+.||||++.... ....+.+.+|++++.+++|||||++++++.+.+..++||
T Consensus 185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVm 264 (543)
T 3c4z_A 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVM 264 (543)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEE
Confidence 5688889999999999999996 478999999996532 123467899999999999999999999999999999999
Q ss_pred cccCCCcHHHHHhcCCC------------------CCCCHHHHccccC
Q 004275 735 EYLENNSLARALFGNAI------------------TKITYTFSLHLWN 764 (764)
Q Consensus 735 Ey~~~GsL~~~L~~~~~------------------~~l~~~~~~~i~h 764 (764)
|||++|+|.+++..... .++.|.|..+|+|
T Consensus 265 E~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvH 312 (543)
T 3c4z_A 265 TIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIY 312 (543)
T ss_dssp CCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred EeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcc
Confidence 99999999999975321 2477888888887
No 299
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=99.19 E-value=1.1e-11 Score=128.40 Aligned_cols=106 Identities=25% Similarity=0.383 Sum_probs=89.9
Q ss_pred cCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcC-hhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEEcc
Q 004275 659 NNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKS-KQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVYEY 736 (764)
Q Consensus 659 ~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 736 (764)
++|+..+.||+|+||.||+|+. .+++.||||.+.... ....+.+.+|++++++++||||+++++++...+..++||||
T Consensus 7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 86 (276)
T 2yex_A 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 86 (276)
T ss_dssp HHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred cceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEe
Confidence 4588899999999999999996 478999999986432 23356899999999999999999999999999999999999
Q ss_pred cCCCcHHHHHhcCCC--------------CCCCHHHHccccC
Q 004275 737 LENNSLARALFGNAI--------------TKITYTFSLHLWN 764 (764)
Q Consensus 737 ~~~GsL~~~L~~~~~--------------~~l~~~~~~~i~h 764 (764)
+++|+|.+++..... .++.+.|..+|+|
T Consensus 87 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H 128 (276)
T 2yex_A 87 CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITH 128 (276)
T ss_dssp CTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred cCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 999999998865421 2477788888887
No 300
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=99.19 E-value=2.2e-11 Score=128.96 Aligned_cols=106 Identities=25% Similarity=0.398 Sum_probs=84.3
Q ss_pred hcCccccCeeeccCCeeEEEEEEc-CCCEEEEEEcCCcChhcHHHHHHHHHHHHhCCCCCccceEEEEE-----------
Q 004275 658 TNNFDAANKIGEGGFGPVYKGTLS-DGAVIAVKQLSSKSKQGNREFVNEIGMISALQHQNLVKLYGCCI----------- 725 (764)
Q Consensus 658 ~~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~----------- 725 (764)
.+.|...+.||+|+||.||+|... +++.||||++........+++.+|++++++++|||||++++++.
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 89 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG 89 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence 356888999999999999999964 58899999997666666678999999999999999999999873
Q ss_pred ---ECCEEEEEEcccCCCcHHHHHhcCCC-------------CCCCHHHHccccC
Q 004275 726 ---EGNQLLLVYEYLENNSLARALFGNAI-------------TKITYTFSLHLWN 764 (764)
Q Consensus 726 ---~~~~~~lv~Ey~~~GsL~~~L~~~~~-------------~~l~~~~~~~i~h 764 (764)
..+..++||||++ |+|.+++..... .++.+.|..+|+|
T Consensus 90 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H 143 (320)
T 2i6l_A 90 SLTELNSVYIVQEYME-TDLANVLEQGPLLEEHARLFMYQLLRGLKYIHSANVLH 143 (320)
T ss_dssp -CCSCSEEEEEEECCS-EEHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCBC
T ss_pred cccccCceeEEeeccC-CCHHHHhhcCCccHHHHHHHHHHHHHHHHHHHhCCEec
Confidence 3467899999998 699999875431 3578888889888
No 301
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=99.19 E-value=1.1e-11 Score=134.06 Aligned_cols=106 Identities=20% Similarity=0.281 Sum_probs=89.8
Q ss_pred cCccccCeeeccCCeeEEEEEE----cCCCEEEEEEcCCcC----hhcHHHHHHHHHHHHhC-CCCCccceEEEEEECCE
Q 004275 659 NNFDAANKIGEGGFGPVYKGTL----SDGAVIAVKQLSSKS----KQGNREFVNEIGMISAL-QHQNLVKLYGCCIEGNQ 729 (764)
Q Consensus 659 ~~~~~~~~iG~G~~g~Vy~~~~----~~g~~vAvK~l~~~~----~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~ 729 (764)
++|...+.||+|+||.||+++. .+++.||||++.... ....+.+.+|++++.++ +|+||+++++++...+.
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 133 (355)
T 1vzo_A 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK 133 (355)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCce
Confidence 4688899999999999999986 478999999997532 12345678899999999 69999999999999999
Q ss_pred EEEEEcccCCCcHHHHHhcCCC--------------CCCCHHHHccccC
Q 004275 730 LLLVYEYLENNSLARALFGNAI--------------TKITYTFSLHLWN 764 (764)
Q Consensus 730 ~~lv~Ey~~~GsL~~~L~~~~~--------------~~l~~~~~~~i~h 764 (764)
.++||||+++|+|.+++..... .+|.|.|..+|+|
T Consensus 134 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH 182 (355)
T 1vzo_A 134 LHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIY 182 (355)
T ss_dssp EEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred EEEEeecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 9999999999999999975321 3578889999988
No 302
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=99.18 E-value=2.3e-11 Score=141.45 Aligned_cols=99 Identities=25% Similarity=0.390 Sum_probs=82.8
Q ss_pred CeeeccCCeeEEEEEEc---CCCEEEEEEcCCcC--hhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEEcccCC
Q 004275 665 NKIGEGGFGPVYKGTLS---DGAVIAVKQLSSKS--KQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVYEYLEN 739 (764)
Q Consensus 665 ~~iG~G~~g~Vy~~~~~---~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~ 739 (764)
+.||+|+||.||+|.+. .++.||||++.... ....++|.+|++++.+++|||||+++++|. .+..++|||||++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~-~~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEE-SSSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCCEEEEEEccCC
Confidence 47999999999999753 45789999997542 233578999999999999999999999996 4568899999999
Q ss_pred CcHHHHHhcCCC--------------CCCCHHHHccccC
Q 004275 740 NSLARALFGNAI--------------TKITYTFSLHLWN 764 (764)
Q Consensus 740 GsL~~~L~~~~~--------------~~l~~~~~~~i~h 764 (764)
|+|.+++..... .++.|.|..+|+|
T Consensus 454 g~L~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiH 492 (635)
T 4fl3_A 454 GPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVH 492 (635)
T ss_dssp EEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred CCHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHCCEeC
Confidence 999999976432 3578888888888
No 303
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=99.18 E-value=1.4e-11 Score=131.05 Aligned_cols=106 Identities=18% Similarity=0.282 Sum_probs=85.0
Q ss_pred hcCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcCh--------hcHHHHHHHHHHHHhCCCCCccceEEEEEECC
Q 004275 658 TNNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKSK--------QGNREFVNEIGMISALQHQNLVKLYGCCIEGN 728 (764)
Q Consensus 658 ~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~--------~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~ 728 (764)
.++|...+.||+|+||.||+|+. .+++.||||.+..... .....+.+|++++.+++||||+++++++...+
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 88 (322)
T 2ycf_A 9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED 88 (322)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS
T ss_pred hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc
Confidence 34588899999999999999985 4678999999865321 12245889999999999999999999987554
Q ss_pred EEEEEEcccCCCcHHHHHhcCCC--------------CCCCHHHHccccC
Q 004275 729 QLLLVYEYLENNSLARALFGNAI--------------TKITYTFSLHLWN 764 (764)
Q Consensus 729 ~~~lv~Ey~~~GsL~~~L~~~~~--------------~~l~~~~~~~i~h 764 (764)
.++||||+++|+|.+++..... .++.+.|..+|+|
T Consensus 89 -~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH 137 (322)
T 2ycf_A 89 -YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIH 137 (322)
T ss_dssp -EEEEEECCTTEETHHHHSTTCCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred -eEEEEecCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 8999999999999999875432 2577888888888
No 304
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=99.18 E-value=2.7e-11 Score=129.38 Aligned_cols=107 Identities=23% Similarity=0.429 Sum_probs=89.5
Q ss_pred hcCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcC--hhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEE
Q 004275 658 TNNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKS--KQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVY 734 (764)
Q Consensus 658 ~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 734 (764)
.++|...+.||+|+||.||+|+. .+|+.||||++.... ....+.+.+|++++.+++|||||++++++...+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 103 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVF 103 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEE
Confidence 34588889999999999999996 458999999985432 223466889999999999999999999999999999999
Q ss_pred cccCCCcHHHHHhcCCC--------------CCCCHHHHccccC
Q 004275 735 EYLENNSLARALFGNAI--------------TKITYTFSLHLWN 764 (764)
Q Consensus 735 Ey~~~GsL~~~L~~~~~--------------~~l~~~~~~~i~h 764 (764)
||+++|+|.+++..... .++.+.|..+|+|
T Consensus 104 e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH 147 (331)
T 4aaa_A 104 EFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIH 147 (331)
T ss_dssp ECCSEEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred ecCCcchHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCEEc
Confidence 99999999888764321 3578888888888
No 305
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=99.18 E-value=2e-11 Score=132.77 Aligned_cols=104 Identities=27% Similarity=0.435 Sum_probs=84.8
Q ss_pred ccccCeeeccCCeeEEEEEEc--CC--CEEEEEEcCCc-ChhcHHHHHHHHHHHHhCCCCCccceEEEEEE-CCEEEEEE
Q 004275 661 FDAANKIGEGGFGPVYKGTLS--DG--AVIAVKQLSSK-SKQGNREFVNEIGMISALQHQNLVKLYGCCIE-GNQLLLVY 734 (764)
Q Consensus 661 ~~~~~~iG~G~~g~Vy~~~~~--~g--~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~-~~~~~lv~ 734 (764)
|...+.||+|+||.||+|+.. ++ ..||||.+... .....++|.+|++++++++|||||+++++|.. .+..++||
T Consensus 91 ~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~ 170 (373)
T 3c1x_A 91 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL 170 (373)
T ss_dssp EEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEE
T ss_pred eecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEE
Confidence 566789999999999999853 22 36899999753 33446789999999999999999999999865 45789999
Q ss_pred cccCCCcHHHHHhcCCC---------------CCCCHHHHccccC
Q 004275 735 EYLENNSLARALFGNAI---------------TKITYTFSLHLWN 764 (764)
Q Consensus 735 Ey~~~GsL~~~L~~~~~---------------~~l~~~~~~~i~h 764 (764)
||+++|+|.+++..... .++.|.|..+|+|
T Consensus 171 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH 215 (373)
T 3c1x_A 171 PYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVH 215 (373)
T ss_dssp ECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred ECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEec
Confidence 99999999999976432 2477888888887
No 306
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=99.18 E-value=3.2e-11 Score=125.99 Aligned_cols=107 Identities=21% Similarity=0.366 Sum_probs=90.6
Q ss_pred hcCccccCeeeccCCeeEEEEEEc-CCCEEEEEEcCCcC--hhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEE
Q 004275 658 TNNFDAANKIGEGGFGPVYKGTLS-DGAVIAVKQLSSKS--KQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVY 734 (764)
Q Consensus 658 ~~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 734 (764)
.+.|...+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++...+..++||
T Consensus 21 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 100 (287)
T 2wei_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG 100 (287)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEE
Confidence 456889999999999999999964 78999999986432 234578999999999999999999999999999999999
Q ss_pred cccCCCcHHHHHhcCCC--------------CCCCHHHHccccC
Q 004275 735 EYLENNSLARALFGNAI--------------TKITYTFSLHLWN 764 (764)
Q Consensus 735 Ey~~~GsL~~~L~~~~~--------------~~l~~~~~~~i~h 764 (764)
||+++|+|.+++..... .++.+.|..+|+|
T Consensus 101 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H 144 (287)
T 2wei_A 101 ELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVH 144 (287)
T ss_dssp CCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred EccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 99999999998864321 3577788888887
No 307
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=99.17 E-value=4.7e-11 Score=125.15 Aligned_cols=104 Identities=23% Similarity=0.348 Sum_probs=84.7
Q ss_pred ccccCeeeccCCeeEEEEEEc-CCC---EEEEEEcCCcC-hhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEE-EEEE
Q 004275 661 FDAANKIGEGGFGPVYKGTLS-DGA---VIAVKQLSSKS-KQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQL-LLVY 734 (764)
Q Consensus 661 ~~~~~~iG~G~~g~Vy~~~~~-~g~---~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~-~lv~ 734 (764)
|...+.||+|+||.||+|+.. ++. .||+|.+.... ....+.|.+|++++++++|||||++++++.+.+.. ++||
T Consensus 23 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~ 102 (298)
T 3pls_A 23 THSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLL 102 (298)
T ss_dssp EEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEE
T ss_pred EccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEE
Confidence 556689999999999999853 333 79999997543 33457899999999999999999999999876655 9999
Q ss_pred cccCCCcHHHHHhcCCC---------------CCCCHHHHccccC
Q 004275 735 EYLENNSLARALFGNAI---------------TKITYTFSLHLWN 764 (764)
Q Consensus 735 Ey~~~GsL~~~L~~~~~---------------~~l~~~~~~~i~h 764 (764)
||+++|+|.+++..... .++.+.|..+|+|
T Consensus 103 e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H 147 (298)
T 3pls_A 103 PYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFVH 147 (298)
T ss_dssp CCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred ecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 99999999999986321 2467778888887
No 308
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=99.17 E-value=3.2e-11 Score=130.35 Aligned_cols=114 Identities=25% Similarity=0.324 Sum_probs=94.6
Q ss_pred ccHHHHHHhhcCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcChhcHHHHHHHHHHHHhCC-----CCCccceEE
Q 004275 649 FTLRQIKAATNNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKSKQGNREFVNEIGMISALQ-----HQNLVKLYG 722 (764)
Q Consensus 649 ~~~~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~-----H~niv~l~g 722 (764)
+++.+.....+.|...+.||+|+||.||+|+. .+++.||||++... ....+.+.+|++++.+++ |||||++++
T Consensus 25 ~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~ 103 (360)
T 3llt_A 25 FSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIVKYHG 103 (360)
T ss_dssp CCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEE
T ss_pred eeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCeecccc
Confidence 44444445567899999999999999999995 57889999999753 233467888999999987 999999999
Q ss_pred EEEECCEEEEEEcccCCCcHHHHHhcCCC----------------CCCCHHHHccccC
Q 004275 723 CCIEGNQLLLVYEYLENNSLARALFGNAI----------------TKITYTFSLHLWN 764 (764)
Q Consensus 723 ~~~~~~~~~lv~Ey~~~GsL~~~L~~~~~----------------~~l~~~~~~~i~h 764 (764)
++...+..++||||+ +|+|.+++..... .+|.|.|..+|+|
T Consensus 104 ~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH 160 (360)
T 3llt_A 104 KFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTH 160 (360)
T ss_dssp EEEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred eeeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeee
Confidence 999999999999999 8999999976532 2477888888888
No 309
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=99.17 E-value=3.7e-11 Score=125.62 Aligned_cols=104 Identities=24% Similarity=0.393 Sum_probs=85.8
Q ss_pred ccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCc--ChhcHHHHHHHHHHHHhCCCCCccceEEEEEE----CCEEEEE
Q 004275 661 FDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSK--SKQGNREFVNEIGMISALQHQNLVKLYGCCIE----GNQLLLV 733 (764)
Q Consensus 661 ~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~----~~~~~lv 733 (764)
|...+.||+|+||.||+|.. .++..||+|.+... .....+.+.+|++++++++|||||++++++.. ....++|
T Consensus 28 ~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv 107 (290)
T 1t4h_A 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV 107 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEE
T ss_pred EEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEE
Confidence 66778899999999999985 56789999998643 33345779999999999999999999999876 3568999
Q ss_pred EcccCCCcHHHHHhcCCC--------------CCCCHHHHcc--ccC
Q 004275 734 YEYLENNSLARALFGNAI--------------TKITYTFSLH--LWN 764 (764)
Q Consensus 734 ~Ey~~~GsL~~~L~~~~~--------------~~l~~~~~~~--i~h 764 (764)
|||+++|+|.+++..... .++.|.|..+ |+|
T Consensus 108 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H 154 (290)
T 1t4h_A 108 TELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIH 154 (290)
T ss_dssp EECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCC
T ss_pred EEecCCCCHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHcCCCCEEE
Confidence 999999999999975321 3467778877 877
No 310
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.17 E-value=7e-11 Score=127.06 Aligned_cols=102 Identities=19% Similarity=0.132 Sum_probs=83.1
Q ss_pred EcCCC-cccccCCccCCCCCCCCEEEccC-CcCCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEeeCCc
Q 004275 91 LLKGF-NLAGVIPEEFGNLTFLQEVDLSR-NYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVLEDNQ 168 (764)
Q Consensus 91 ~L~~~-~l~g~~p~~l~~L~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~ 168 (764)
+++++ ++.+ +|. |..+++|++|+|++ |.|++..|..|..|++|++|+|++|+|++..|..|.+|++|++|+|++|+
T Consensus 14 ~~~~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 91 (347)
T 2ifg_A 14 RCTRDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNA 91 (347)
T ss_dssp ECCSSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSC
T ss_pred EcCCCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCCc
Confidence 45555 5664 777 99999999999996 99988777889999999999999999998888888999999999999999
Q ss_pred CCCCCCccCCCCCCCcEEEccCccCCC
Q 004275 169 LVGPLPENLGNLKSLRRILLSSNNFTG 195 (764)
Q Consensus 169 l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 195 (764)
|++..+..+..++ |+.|+|.+|.+..
T Consensus 92 l~~~~~~~~~~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 92 LESLSWKTVQGLS-LQELVLSGNPLHC 117 (347)
T ss_dssp CSCCCSTTTCSCC-CCEEECCSSCCCC
T ss_pred cceeCHHHcccCC-ceEEEeeCCCccC
Confidence 8865555555555 8888888887763
No 311
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=99.17 E-value=4e-11 Score=125.86 Aligned_cols=105 Identities=27% Similarity=0.409 Sum_probs=85.0
Q ss_pred CccccCeeeccCCeeEEEEEEcC----CCEEEEEEcCCcC-hhcHHHHHHHHHHHHhCCCCCccceEEEEEE-CCEEEEE
Q 004275 660 NFDAANKIGEGGFGPVYKGTLSD----GAVIAVKQLSSKS-KQGNREFVNEIGMISALQHQNLVKLYGCCIE-GNQLLLV 733 (764)
Q Consensus 660 ~~~~~~~iG~G~~g~Vy~~~~~~----g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~-~~~~~lv 733 (764)
.|+..+.||+|+||.||+|+..+ +..||||.+.... ....+.|.+|++++++++|||||+++++|.. .+..++|
T Consensus 26 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v 105 (298)
T 3f66_A 26 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV 105 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred ehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEEE
Confidence 47778999999999999998532 2368999997643 3445789999999999999999999999765 4578999
Q ss_pred EcccCCCcHHHHHhcCCC---------------CCCCHHHHccccC
Q 004275 734 YEYLENNSLARALFGNAI---------------TKITYTFSLHLWN 764 (764)
Q Consensus 734 ~Ey~~~GsL~~~L~~~~~---------------~~l~~~~~~~i~h 764 (764)
|||+++|+|.+++..... .++.+.|..+|+|
T Consensus 106 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~~i~H 151 (298)
T 3f66_A 106 LPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVH 151 (298)
T ss_dssp EECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred EeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccC
Confidence 999999999999976432 2467788888887
No 312
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=99.16 E-value=1.2e-11 Score=128.65 Aligned_cols=105 Identities=27% Similarity=0.465 Sum_probs=88.2
Q ss_pred hcCccccCeeeccCCeeEEEEEEcCCCEEEEEEcCCcChhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEEccc
Q 004275 658 TNNFDAANKIGEGGFGPVYKGTLSDGAVIAVKQLSSKSKQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVYEYL 737 (764)
Q Consensus 658 ~~~~~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~ 737 (764)
.+.|+..+.||+|+||.||+|...++..||||.+.... ...+.|.+|++++.+++||||+++++++. .+..++||||+
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~ 89 (279)
T 1qpc_A 12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYM 89 (279)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECC
T ss_pred HHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEEecC
Confidence 45688899999999999999998888899999997543 24578999999999999999999999986 45689999999
Q ss_pred CCCcHHHHHhcCC----------------CCCCCHHHHccccC
Q 004275 738 ENNSLARALFGNA----------------ITKITYTFSLHLWN 764 (764)
Q Consensus 738 ~~GsL~~~L~~~~----------------~~~l~~~~~~~i~h 764 (764)
++|+|.+++.... ..++.+.|..+|+|
T Consensus 90 ~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H 132 (279)
T 1qpc_A 90 ENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIH 132 (279)
T ss_dssp TTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred CCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 9999999986431 12467778888877
No 313
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=99.16 E-value=3.4e-11 Score=127.41 Aligned_cols=106 Identities=26% Similarity=0.489 Sum_probs=84.7
Q ss_pred hhcCccccCeeeccCCeeEEEEEEc-CCCEEEEEEcCCcChhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEEc
Q 004275 657 ATNNFDAANKIGEGGFGPVYKGTLS-DGAVIAVKQLSSKSKQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVYE 735 (764)
Q Consensus 657 ~~~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E 735 (764)
..+.|+..+.||+|+||.||+|... +|+.||||.+.... ..+++.+|++++.+++||||+++++++...+..++|||
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 104 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVME 104 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEee
Confidence 4567889999999999999999964 68999999996532 34679999999999999999999999999999999999
Q ss_pred ccCCCcHHHHHhcCCC---------------CCCCHHHHccccC
Q 004275 736 YLENNSLARALFGNAI---------------TKITYTFSLHLWN 764 (764)
Q Consensus 736 y~~~GsL~~~L~~~~~---------------~~l~~~~~~~i~h 764 (764)
|+++|+|.+++..... .++.+.|..+|+|
T Consensus 105 ~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H 148 (314)
T 3com_A 105 YCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIH 148 (314)
T ss_dssp CCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred cCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcC
Confidence 9999999999963211 2477888888887
No 314
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=99.16 E-value=3.4e-11 Score=126.01 Aligned_cols=106 Identities=25% Similarity=0.388 Sum_probs=85.2
Q ss_pred hcCccccC-eeeccCCeeEEEEEE---cCCCEEEEEEcCCcCh--hcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEE
Q 004275 658 TNNFDAAN-KIGEGGFGPVYKGTL---SDGAVIAVKQLSSKSK--QGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLL 731 (764)
Q Consensus 658 ~~~~~~~~-~iG~G~~g~Vy~~~~---~~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 731 (764)
.+.|...+ .||+|+||.||+|.. .+++.||||.+..... ...++|.+|++++.+++||||+++++++ ..+..+
T Consensus 15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~ 93 (291)
T 1xbb_A 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWM 93 (291)
T ss_dssp GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEE
T ss_pred chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcE
Confidence 34566666 999999999999964 3467899999975432 2356899999999999999999999999 667789
Q ss_pred EEEcccCCCcHHHHHhcCCC--------------CCCCHHHHccccC
Q 004275 732 LVYEYLENNSLARALFGNAI--------------TKITYTFSLHLWN 764 (764)
Q Consensus 732 lv~Ey~~~GsL~~~L~~~~~--------------~~l~~~~~~~i~h 764 (764)
+||||+++|+|.+++..... .++.+.|..+|+|
T Consensus 94 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H 140 (291)
T 1xbb_A 94 LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVH 140 (291)
T ss_dssp EEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred EEEEeCCCCCHHHHHHhCcCCCHHHHHHHHHHHHHHHHHHHhCCeEc
Confidence 99999999999999986532 2477888888887
No 315
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=99.15 E-value=2.9e-11 Score=125.50 Aligned_cols=91 Identities=27% Similarity=0.523 Sum_probs=78.6
Q ss_pred hcCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCc--ChhcHHHHHHHHHHHHhCCCCCccceEEEEEE--CCEEEE
Q 004275 658 TNNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSK--SKQGNREFVNEIGMISALQHQNLVKLYGCCIE--GNQLLL 732 (764)
Q Consensus 658 ~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~--~~~~~l 732 (764)
.++|+..+.||+|+||.||++.. .+++.||+|.+... .....+.+.+|++++++++||||+++++++.. .+..++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 35688899999999999999995 47899999999653 23345679999999999999999999998865 467899
Q ss_pred EEcccCCCcHHHHHhc
Q 004275 733 VYEYLENNSLARALFG 748 (764)
Q Consensus 733 v~Ey~~~GsL~~~L~~ 748 (764)
||||+++|+|.+++..
T Consensus 85 v~e~~~~~~L~~~l~~ 100 (279)
T 2w5a_A 85 VMEYCEGGDLASVITK 100 (279)
T ss_dssp EEECCTTEEHHHHHHH
T ss_pred EEeCCCCCCHHHHHHh
Confidence 9999999999999974
No 316
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=99.15 E-value=5.5e-11 Score=123.68 Aligned_cols=106 Identities=25% Similarity=0.375 Sum_probs=86.6
Q ss_pred hcCccccCeeeccCCeeEEEEEEcC----CCEEEEEEcCCc-ChhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEE
Q 004275 658 TNNFDAANKIGEGGFGPVYKGTLSD----GAVIAVKQLSSK-SKQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLL 732 (764)
Q Consensus 658 ~~~~~~~~~iG~G~~g~Vy~~~~~~----g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 732 (764)
.++|...+.||+|+||.||+|+... +..||||.+... .....+.|.+|++++++++||||+++++++.. +..++
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~ 89 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWI 89 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCEE
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCEE
Confidence 4568889999999999999998542 236999999764 33345789999999999999999999999864 55789
Q ss_pred EEcccCCCcHHHHHhcCCC---------------CCCCHHHHccccC
Q 004275 733 VYEYLENNSLARALFGNAI---------------TKITYTFSLHLWN 764 (764)
Q Consensus 733 v~Ey~~~GsL~~~L~~~~~---------------~~l~~~~~~~i~h 764 (764)
||||+++|+|.+++..... .++.+.|..+|+|
T Consensus 90 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H 136 (281)
T 3cc6_A 90 IMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVH 136 (281)
T ss_dssp EEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred EEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 9999999999999975321 2477888888888
No 317
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=99.15 E-value=5.1e-11 Score=127.96 Aligned_cols=105 Identities=20% Similarity=0.295 Sum_probs=89.6
Q ss_pred cCccccCeeeccCCeeEEEEEEcCCCEEEEEEcCCc--ChhcHHHHHHHHHHHHhCCC--CCccceEEEEEECCEEEEEE
Q 004275 659 NNFDAANKIGEGGFGPVYKGTLSDGAVIAVKQLSSK--SKQGNREFVNEIGMISALQH--QNLVKLYGCCIEGNQLLLVY 734 (764)
Q Consensus 659 ~~~~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H--~niv~l~g~~~~~~~~~lv~ 734 (764)
+.|...+.||+|+||.||++...+++.||||++... .....+.|.+|++++.+++| +|||++++++...+..++||
T Consensus 9 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 88 (343)
T 3dbq_A 9 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 88 (343)
T ss_dssp CEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEE
Confidence 458888999999999999999888999999998643 33345789999999999987 99999999999999999999
Q ss_pred cccCCCcHHHHHhcCCC--------------CCCCHHHHccccC
Q 004275 735 EYLENNSLARALFGNAI--------------TKITYTFSLHLWN 764 (764)
Q Consensus 735 Ey~~~GsL~~~L~~~~~--------------~~l~~~~~~~i~h 764 (764)
| +.+|+|.+++..... .++.|.|..+|+|
T Consensus 89 e-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~iiH 131 (343)
T 3dbq_A 89 E-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVH 131 (343)
T ss_dssp C-CCSEEHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred e-CCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 9 567899999986532 3578888888888
No 318
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=99.15 E-value=4.6e-11 Score=126.37 Aligned_cols=108 Identities=24% Similarity=0.441 Sum_probs=82.2
Q ss_pred hhcCccccCeeeccCCeeEEEEEEc----CCCEEEEEEcCCc--ChhcHHHHHHHHHHHHhCCCCCccceEEEEEECCE-
Q 004275 657 ATNNFDAANKIGEGGFGPVYKGTLS----DGAVIAVKQLSSK--SKQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQ- 729 (764)
Q Consensus 657 ~~~~~~~~~~iG~G~~g~Vy~~~~~----~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~- 729 (764)
..+.|...+.||+|+||.||+|... .+..||||.+... .....+.|.+|++++++++||||+++++++...+.
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 111 (313)
T 3brb_A 32 DRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQ 111 (313)
T ss_dssp CGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC----
T ss_pred CHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeecccc
Confidence 3466888899999999999999853 3458999999753 23345679999999999999999999999987553
Q ss_pred ----EEEEEcccCCCcHHHHHhcCC----C----------------CCCCHHHHccccC
Q 004275 730 ----LLLVYEYLENNSLARALFGNA----I----------------TKITYTFSLHLWN 764 (764)
Q Consensus 730 ----~~lv~Ey~~~GsL~~~L~~~~----~----------------~~l~~~~~~~i~h 764 (764)
.++||||+++|+|.+++.... . .++.+.|..+|+|
T Consensus 112 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH 170 (313)
T 3brb_A 112 GIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLH 170 (313)
T ss_dssp ---CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCC
T ss_pred CCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 499999999999999995321 1 2466777777777
No 319
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=99.14 E-value=3e-11 Score=135.18 Aligned_cols=106 Identities=19% Similarity=0.376 Sum_probs=79.7
Q ss_pred hcCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCc--ChhcHHHHHHHHHHHHhCCCCCccceEEEEEEC-----CE
Q 004275 658 TNNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSK--SKQGNREFVNEIGMISALQHQNLVKLYGCCIEG-----NQ 729 (764)
Q Consensus 658 ~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~-----~~ 729 (764)
.++|...+.||+|+||.||+|.. .+++.||||++... .....+.+.+|++++.+++|||||++++++... +.
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 131 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE 131 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence 35688999999999999999984 57899999999653 233457899999999999999999999999543 46
Q ss_pred EEEEEcccCCCcHHHHHhcCCC--------------CCCCHHHHccccC
Q 004275 730 LLLVYEYLENNSLARALFGNAI--------------TKITYTFSLHLWN 764 (764)
Q Consensus 730 ~~lv~Ey~~~GsL~~~L~~~~~--------------~~l~~~~~~~i~h 764 (764)
.|+||||++ |+|.+++..... .+|.|.|..+|+|
T Consensus 132 ~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiH 179 (458)
T 3rp9_A 132 LYVVLEIAD-SDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAGILH 179 (458)
T ss_dssp EEEEECCCS-EEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTCBC
T ss_pred EEEEEeccc-cchhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhCCcCC
Confidence 899999986 699999876531 3588999999998
No 320
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=99.14 E-value=3.5e-11 Score=128.49 Aligned_cols=104 Identities=24% Similarity=0.267 Sum_probs=87.2
Q ss_pred hcCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcChhcHHHHHHHHHHHHhC-CCCCccceEEEEEECCEEEEEEc
Q 004275 658 TNNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKSKQGNREFVNEIGMISAL-QHQNLVKLYGCCIEGNQLLLVYE 735 (764)
Q Consensus 658 ~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~E 735 (764)
.++|...+.||+|+||.||+|+. .+|+.||||.+..... .+++.+|++++.++ +|+||+++++++...+..++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e 85 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLE 85 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEE
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEE
Confidence 35688899999999999999994 6789999999865432 24688999999999 89999999999999999999999
Q ss_pred ccCCCcHHHHHhcCCC---------------CCCCHHHHccccC
Q 004275 736 YLENNSLARALFGNAI---------------TKITYTFSLHLWN 764 (764)
Q Consensus 736 y~~~GsL~~~L~~~~~---------------~~l~~~~~~~i~h 764 (764)
|+ +|+|.+++..... .++.|.|..+|+|
T Consensus 86 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~iiH 128 (330)
T 2izr_A 86 LL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNLIY 128 (330)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred eC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 99 9999999985321 2477888888887
No 321
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=99.14 E-value=3.9e-11 Score=133.22 Aligned_cols=106 Identities=18% Similarity=0.339 Sum_probs=89.0
Q ss_pred hcCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCc--ChhcHHHHHHHHHHHHhCCCCCccceEEEEEEC-----CE
Q 004275 658 TNNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSK--SKQGNREFVNEIGMISALQHQNLVKLYGCCIEG-----NQ 729 (764)
Q Consensus 658 ~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~-----~~ 729 (764)
.++|...+.||+|+||.||+|+. .+++.||||++... .....+.+.+|++++++++|+|||++++++... +.
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 46688999999999999999985 56889999999753 233457899999999999999999999999776 56
Q ss_pred EEEEEcccCCCcHHHHHhcCCC--------------CCCCHHHHccccC
Q 004275 730 LLLVYEYLENNSLARALFGNAI--------------TKITYTFSLHLWN 764 (764)
Q Consensus 730 ~~lv~Ey~~~GsL~~~L~~~~~--------------~~l~~~~~~~i~h 764 (764)
.|+|||||+ |+|.+++..... .+|.|.|..+|+|
T Consensus 105 ~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givH 152 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESGIIH 152 (432)
T ss_dssp EEEEEECCS-EEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred EEEEEecCC-cCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
Confidence 899999998 599999986531 3578888888888
No 322
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.14 E-value=7.5e-11 Score=126.79 Aligned_cols=101 Identities=23% Similarity=0.274 Sum_probs=54.7
Q ss_pred EEccCC-cCCccCchhhhcCCCCcEEeccc-CcCcccCCcCcCCCCCCCEEEeeCCcCCCCCCccCCCCCCCcEEEccCc
Q 004275 114 VDLSRN-YFNGSLPKSFARLQNLTKLLILG-NRLSGSIPLEIGDISTLEELVLEDNQLVGPLPENLGNLKSLRRILLSSN 191 (764)
Q Consensus 114 L~Ls~N-~l~~~~p~~~~~l~~L~~L~Ls~-n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N 191 (764)
++++++ +++ .+|. |..+++|++|+|++ |.+++..|..|+.|++|++|+|++|+|++..|..|.+|++|++|+|++|
T Consensus 13 v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N 90 (347)
T 2ifg_A 13 LRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFN 90 (347)
T ss_dssp EECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSS
T ss_pred EEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCC
Confidence 456655 555 3555 66666666666664 6665555555566666666666666665555555555555555555555
Q ss_pred cCCCCCcccccCCCCCcEEEccCccC
Q 004275 192 NFTGSIPESYGNLKNLTEFRIDGSNL 217 (764)
Q Consensus 192 ~l~~~~p~~~~~l~~L~~L~L~~n~l 217 (764)
+|++..+..|..++ |+.|+|.+|.+
T Consensus 91 ~l~~~~~~~~~~~~-L~~l~l~~N~~ 115 (347)
T 2ifg_A 91 ALESLSWKTVQGLS-LQELVLSGNPL 115 (347)
T ss_dssp CCSCCCSTTTCSCC-CCEEECCSSCC
T ss_pred ccceeCHHHcccCC-ceEEEeeCCCc
Confidence 55543333333332 44444444443
No 323
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=99.14 E-value=5.4e-11 Score=123.67 Aligned_cols=102 Identities=25% Similarity=0.452 Sum_probs=84.2
Q ss_pred cCccccCeeeccCCeeEEEEEEc-CCCEEEEEEcCCcChhcHHHHHHHHHHHHhCCCCCccceEEEEEE-----------
Q 004275 659 NNFDAANKIGEGGFGPVYKGTLS-DGAVIAVKQLSSKSKQGNREFVNEIGMISALQHQNLVKLYGCCIE----------- 726 (764)
Q Consensus 659 ~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~----------- 726 (764)
.+|+..+.||+|+||.||+|+.. +++.||||.+.... +.+.+|++++.+++||||+++++++..
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 86 (284)
T 2a19_B 11 MDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKN 86 (284)
T ss_dssp HHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-------
T ss_pred cccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccccc
Confidence 45888999999999999999964 78999999996543 357789999999999999999999864
Q ss_pred -----CCEEEEEEcccCCCcHHHHHhcCCC----------------CCCCHHHHccccC
Q 004275 727 -----GNQLLLVYEYLENNSLARALFGNAI----------------TKITYTFSLHLWN 764 (764)
Q Consensus 727 -----~~~~~lv~Ey~~~GsL~~~L~~~~~----------------~~l~~~~~~~i~h 764 (764)
....++||||+++|+|.+++..... .++.+.|..+|+|
T Consensus 87 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H 145 (284)
T 2a19_B 87 SSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIN 145 (284)
T ss_dssp --CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred ccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeee
Confidence 3457999999999999999975422 2366677777776
No 324
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=99.14 E-value=4.9e-11 Score=127.13 Aligned_cols=103 Identities=17% Similarity=0.378 Sum_probs=88.4
Q ss_pred cCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcChhcHHHHHHHHHHHHhCC-CCCccceEEEEEE--CCEEEEEE
Q 004275 659 NNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKSKQGNREFVNEIGMISALQ-HQNLVKLYGCCIE--GNQLLLVY 734 (764)
Q Consensus 659 ~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~--~~~~~lv~ 734 (764)
++|+..+.||+|+||.||+|+. .+++.||||.+... ..+.+.+|++++.+++ ||||+++++++.. ....++||
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~ 112 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF 112 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEE
Confidence 5588899999999999999984 67899999999754 3467999999999997 9999999999987 56789999
Q ss_pred cccCCCcHHHHHhcCC-----------CCCCCHHHHccccC
Q 004275 735 EYLENNSLARALFGNA-----------ITKITYTFSLHLWN 764 (764)
Q Consensus 735 Ey~~~GsL~~~L~~~~-----------~~~l~~~~~~~i~h 764 (764)
||+++|+|.+++..-. ..++.+.|..+|+|
T Consensus 113 e~~~~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH 153 (330)
T 3nsz_A 113 EHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMH 153 (330)
T ss_dssp ECCCCCCHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred eccCchhHHHHHHhCCHHHHHHHHHHHHHHHHHHHhCCeee
Confidence 9999999998875422 14688999999988
No 325
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=99.14 E-value=4.6e-11 Score=128.46 Aligned_cols=107 Identities=21% Similarity=0.448 Sum_probs=84.0
Q ss_pred hhcCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcChh-----cHHHHHHHHHHHHhCCCCCccceEEEEEECCEE
Q 004275 657 ATNNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKSKQ-----GNREFVNEIGMISALQHQNLVKLYGCCIEGNQL 730 (764)
Q Consensus 657 ~~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~-----~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~ 730 (764)
..+.|...+.||+|+||.||+|+. .+|+.||||++...... ..+.+.+|++++.+++|||||++++++...+..
T Consensus 8 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 87 (346)
T 1ua2_A 8 RAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNI 87 (346)
T ss_dssp -----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCC
T ss_pred HhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCce
Confidence 346688999999999999999995 56899999999753221 124688999999999999999999999999999
Q ss_pred EEEEcccCCCcHHHHHhcCCC---------------CCCCHHHHccccC
Q 004275 731 LLVYEYLENNSLARALFGNAI---------------TKITYTFSLHLWN 764 (764)
Q Consensus 731 ~lv~Ey~~~GsL~~~L~~~~~---------------~~l~~~~~~~i~h 764 (764)
++||||+++ +|.+++..... .++.+.|..+|+|
T Consensus 88 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH 135 (346)
T 1ua2_A 88 SLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILH 135 (346)
T ss_dssp EEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred EEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCEEC
Confidence 999999996 89999876431 2478889999988
No 326
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=99.14 E-value=1.3e-11 Score=132.21 Aligned_cols=107 Identities=17% Similarity=0.255 Sum_probs=89.2
Q ss_pred hcCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcCh--------hcHHHHHHHHHHHHhCCCCCccceEEEEEECC
Q 004275 658 TNNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKSK--------QGNREFVNEIGMISALQHQNLVKLYGCCIEGN 728 (764)
Q Consensus 658 ~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~--------~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~ 728 (764)
.++|...+.||+|+||.||+|+. .+++.||||.+..... ...+.+.+|++++.+++|||||++++++...+
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~ 102 (335)
T 3dls_A 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQG 102 (335)
T ss_dssp HHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSS
T ss_pred ccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCC
Confidence 45688899999999999999984 6788999999965421 12345788999999999999999999999999
Q ss_pred EEEEEEcccCCC-cHHHHHhcCCC--------------CCCCHHHHccccC
Q 004275 729 QLLLVYEYLENN-SLARALFGNAI--------------TKITYTFSLHLWN 764 (764)
Q Consensus 729 ~~~lv~Ey~~~G-sL~~~L~~~~~--------------~~l~~~~~~~i~h 764 (764)
..++||||+.+| +|.+++..... .++.|.|..+|+|
T Consensus 103 ~~~lv~e~~~~g~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH 153 (335)
T 3dls_A 103 FFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDIIH 153 (335)
T ss_dssp EEEEEEECCTTSCBHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred EEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEE
Confidence 999999999887 99999976532 2577888888887
No 327
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=99.13 E-value=2.6e-11 Score=125.97 Aligned_cols=104 Identities=28% Similarity=0.476 Sum_probs=86.0
Q ss_pred hcCccccCeeeccCCeeEEEEEEcCCCEEEEEEcCCcChhcHHHHHHHHHHHHhCCCCCccceEEEEEEC-CEEEEEEcc
Q 004275 658 TNNFDAANKIGEGGFGPVYKGTLSDGAVIAVKQLSSKSKQGNREFVNEIGMISALQHQNLVKLYGCCIEG-NQLLLVYEY 736 (764)
Q Consensus 658 ~~~~~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~-~~~~lv~Ey 736 (764)
.++|+..+.||+|+||.||+|.. .|+.||||.+.... ..+.|.+|++++.+++||||+++++++... +..++||||
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~ 96 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 96 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECC
T ss_pred hhhceEEeEEecCCCceEEEEEE-cCCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEec
Confidence 35688899999999999999987 48899999997543 346799999999999999999999998655 468999999
Q ss_pred cCCCcHHHHHhcCC----------------CCCCCHHHHccccC
Q 004275 737 LENNSLARALFGNA----------------ITKITYTFSLHLWN 764 (764)
Q Consensus 737 ~~~GsL~~~L~~~~----------------~~~l~~~~~~~i~h 764 (764)
+++|+|.+++.... ..++.+.|..+|+|
T Consensus 97 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H 140 (278)
T 1byg_A 97 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVH 140 (278)
T ss_dssp CTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred CCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 99999999997431 13577888888888
No 328
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=99.13 E-value=6.2e-11 Score=129.61 Aligned_cols=107 Identities=27% Similarity=0.492 Sum_probs=82.0
Q ss_pred hhcCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCc--ChhcHHHHHHHHHHHHhCC-CCCccceEEEEEECC--EE
Q 004275 657 ATNNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSK--SKQGNREFVNEIGMISALQ-HQNLVKLYGCCIEGN--QL 730 (764)
Q Consensus 657 ~~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~--~~ 730 (764)
..++|...+.||+|+||.||+|.. .+|+.||||++... .....+.+.+|+.++.+++ |||||++++++...+ ..
T Consensus 7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~ 86 (388)
T 3oz6_A 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDV 86 (388)
T ss_dssp HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCE
T ss_pred ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEE
Confidence 456799999999999999999984 57899999999653 2334567889999999998 999999999998654 68
Q ss_pred EEEEcccCCCcHHHHHhcCCC-------------CCCCHHHHccccC
Q 004275 731 LLVYEYLENNSLARALFGNAI-------------TKITYTFSLHLWN 764 (764)
Q Consensus 731 ~lv~Ey~~~GsL~~~L~~~~~-------------~~l~~~~~~~i~h 764 (764)
++|||||+ |+|.+++..... .++.|.|..+|+|
T Consensus 87 ~lv~e~~~-~~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH 132 (388)
T 3oz6_A 87 YLVFDYME-TDLHAVIRANILEPVHKQYVVYQLIKVIKYLHSGGLLH 132 (388)
T ss_dssp EEEEECCS-EEHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred EEEecccC-cCHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEEe
Confidence 99999998 689999876431 3588899999988
No 329
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=99.12 E-value=1.8e-11 Score=131.54 Aligned_cols=87 Identities=20% Similarity=0.405 Sum_probs=77.3
Q ss_pred hcCccccCeeeccCCeeEEEEEEcCCCEEEEEEcCCcChhc-----------------HHHHHHHHHHHHhCCCCCccce
Q 004275 658 TNNFDAANKIGEGGFGPVYKGTLSDGAVIAVKQLSSKSKQG-----------------NREFVNEIGMISALQHQNLVKL 720 (764)
Q Consensus 658 ~~~~~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~-----------------~~~f~~E~~~l~~l~H~niv~l 720 (764)
.++|...+.||+|+||.||+|.. +|+.||||++....... .+.|.+|++++.+++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 35688999999999999999998 89999999986432111 1789999999999999999999
Q ss_pred EEEEEECCEEEEEEcccCCCcHHHH
Q 004275 721 YGCCIEGNQLLLVYEYLENNSLARA 745 (764)
Q Consensus 721 ~g~~~~~~~~~lv~Ey~~~GsL~~~ 745 (764)
++++...+..++||||+++|+|.++
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~ 133 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKF 133 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEE
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHH
Confidence 9999999999999999999999998
No 330
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=99.12 E-value=8e-11 Score=125.76 Aligned_cols=90 Identities=27% Similarity=0.489 Sum_probs=75.3
Q ss_pred HhhcCccccCeeeccCCeeEEEEEEcCCCEEEEEEcCCcChhcHHHHHHHHHHHHhC--CCCCccceEEEEEEC----CE
Q 004275 656 AATNNFDAANKIGEGGFGPVYKGTLSDGAVIAVKQLSSKSKQGNREFVNEIGMISAL--QHQNLVKLYGCCIEG----NQ 729 (764)
Q Consensus 656 ~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l--~H~niv~l~g~~~~~----~~ 729 (764)
...++|+..+.||+|+||.||+|+.. ++.||||++... ....+.+|.+++... +|||||++++++... ..
T Consensus 34 ~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 109 (337)
T 3mdy_A 34 TIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT---EEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQ 109 (337)
T ss_dssp THHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCE
T ss_pred ccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc---ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCc
Confidence 34567999999999999999999875 889999998543 234566677766654 899999999999987 78
Q ss_pred EEEEEcccCCCcHHHHHhcC
Q 004275 730 LLLVYEYLENNSLARALFGN 749 (764)
Q Consensus 730 ~~lv~Ey~~~GsL~~~L~~~ 749 (764)
.++||||+++|+|.+++...
T Consensus 110 ~~lv~e~~~~g~L~~~l~~~ 129 (337)
T 3mdy_A 110 LYLITDYHENGSLYDYLKST 129 (337)
T ss_dssp EEEEECCCTTCBHHHHHHHC
T ss_pred eEEEEeccCCCcHHHHhhcc
Confidence 99999999999999999764
No 331
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=99.12 E-value=1.1e-10 Score=124.92 Aligned_cols=91 Identities=31% Similarity=0.487 Sum_probs=78.7
Q ss_pred HHhhcCccccCeeeccCCeeEEEEEEcCCCEEEEEEcCCcChhcHHHHHHHHHHHHh--CCCCCccceEEEEEECC----
Q 004275 655 KAATNNFDAANKIGEGGFGPVYKGTLSDGAVIAVKQLSSKSKQGNREFVNEIGMISA--LQHQNLVKLYGCCIEGN---- 728 (764)
Q Consensus 655 ~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~--l~H~niv~l~g~~~~~~---- 728 (764)
....++|...+.||+|+||.||+|+. +|+.||||.+... ..+.+.+|.+++.. ++||||+++++++...+
T Consensus 38 ~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~ 113 (342)
T 1b6c_B 38 RTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWT 113 (342)
T ss_dssp HHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCC
T ss_pred ccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccc
Confidence 33456699999999999999999997 5889999999643 34678899999987 78999999999998875
Q ss_pred EEEEEEcccCCCcHHHHHhcC
Q 004275 729 QLLLVYEYLENNSLARALFGN 749 (764)
Q Consensus 729 ~~~lv~Ey~~~GsL~~~L~~~ 749 (764)
..++||||+++|+|.+++...
T Consensus 114 ~~~lv~e~~~~g~L~~~l~~~ 134 (342)
T 1b6c_B 114 QLWLVSDYHEHGSLFDYLNRY 134 (342)
T ss_dssp CEEEEECCCTTCBHHHHHHHC
T ss_pred eeEEEEeecCCCcHHHHHhcc
Confidence 789999999999999999764
No 332
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=99.12 E-value=8e-11 Score=128.81 Aligned_cols=105 Identities=20% Similarity=0.291 Sum_probs=88.7
Q ss_pred cCccccCeeeccCCeeEEEEEEcCCCEEEEEEcCCc--ChhcHHHHHHHHHHHHhCC--CCCccceEEEEEECCEEEEEE
Q 004275 659 NNFDAANKIGEGGFGPVYKGTLSDGAVIAVKQLSSK--SKQGNREFVNEIGMISALQ--HQNLVKLYGCCIEGNQLLLVY 734 (764)
Q Consensus 659 ~~~~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~--H~niv~l~g~~~~~~~~~lv~ 734 (764)
..|...+.||+|+||.||++...+++.||||++... .....+.|.+|++++.+++ |+|||++++++...+..++||
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 135 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 135 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence 348888999999999999999877999999998643 3334578999999999997 599999999999999999999
Q ss_pred cccCCCcHHHHHhcCCC--------------CCCCHHHHccccC
Q 004275 735 EYLENNSLARALFGNAI--------------TKITYTFSLHLWN 764 (764)
Q Consensus 735 Ey~~~GsL~~~L~~~~~--------------~~l~~~~~~~i~h 764 (764)
| +.+|+|.+++..... .+|.|.|..+|+|
T Consensus 136 E-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivH 178 (390)
T 2zmd_A 136 E-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVH 178 (390)
T ss_dssp E-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHTTTCCC
T ss_pred e-cCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeee
Confidence 9 578899999976432 2477888888888
No 333
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=99.12 E-value=2e-11 Score=130.06 Aligned_cols=105 Identities=24% Similarity=0.443 Sum_probs=85.0
Q ss_pred cCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcChh-cHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEEcc
Q 004275 659 NNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKSKQ-GNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVYEY 736 (764)
Q Consensus 659 ~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 736 (764)
++|...+.||+|+||.||+|+. .+++.||||++...... ....+.+|++++.+++|||||++++++...+..++||||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 4688889999999999999996 47899999999654322 123466899999999999999999999999999999999
Q ss_pred cCCCcHHHHHhcCCC---------------CCCCHHHHccccC
Q 004275 737 LENNSLARALFGNAI---------------TKITYTFSLHLWN 764 (764)
Q Consensus 737 ~~~GsL~~~L~~~~~---------------~~l~~~~~~~i~h 764 (764)
++ |+|.+++..... .++.|.|..+|+|
T Consensus 82 ~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH 123 (324)
T 3mtl_A 82 LD-KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLH 123 (324)
T ss_dssp CS-EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEEE
T ss_pred cc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccC
Confidence 98 589999875431 2477788888877
No 334
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=99.11 E-value=3e-11 Score=131.91 Aligned_cols=105 Identities=20% Similarity=0.383 Sum_probs=80.5
Q ss_pred HHhhcCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcChhcHHHHHHHHHHHHhCCCCCccceEEEEEECC-----
Q 004275 655 KAATNNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKSKQGNREFVNEIGMISALQHQNLVKLYGCCIEGN----- 728 (764)
Q Consensus 655 ~~~~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~----- 728 (764)
....++|...+.||+|+||.||+|+. .+|+.||||++..... ...+|++++++++|||||++++++...+
T Consensus 3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 78 (383)
T 3eb0_A 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPK 78 (383)
T ss_dssp ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHTTCCCTTBCCEEEEEEEC------
T ss_pred ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc----hHHHHHHHHHHcCCCCccchhheeeecCccccc
Confidence 34567799999999999999999984 6789999999864322 2347999999999999999999985532
Q ss_pred ---------------------------------EEEEEEcccCCCcHHHHHhc----CC--------------CCCCCHH
Q 004275 729 ---------------------------------QLLLVYEYLENNSLARALFG----NA--------------ITKITYT 757 (764)
Q Consensus 729 ---------------------------------~~~lv~Ey~~~GsL~~~L~~----~~--------------~~~l~~~ 757 (764)
..++|||||+ |+|.+.+.. .. ..++.|.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~L 157 (383)
T 3eb0_A 79 PPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFI 157 (383)
T ss_dssp -------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 3789999999 588877753 11 1357788
Q ss_pred HHccccC
Q 004275 758 FSLHLWN 764 (764)
Q Consensus 758 ~~~~i~h 764 (764)
|..+|+|
T Consensus 158 H~~gi~H 164 (383)
T 3eb0_A 158 HSLGICH 164 (383)
T ss_dssp HTTTEEC
T ss_pred HHCcCcc
Confidence 8888887
No 335
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=99.11 E-value=2.5e-11 Score=129.30 Aligned_cols=105 Identities=27% Similarity=0.433 Sum_probs=84.8
Q ss_pred cCccccCeeeccCCeeEEEEEE-cCCCE----EEEEEcCCcC-hhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEE
Q 004275 659 NNFDAANKIGEGGFGPVYKGTL-SDGAV----IAVKQLSSKS-KQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLL 732 (764)
Q Consensus 659 ~~~~~~~~iG~G~~g~Vy~~~~-~~g~~----vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 732 (764)
++|...+.||+|+||.||+|+. .+++. ||+|.+.... ....+.+.+|++++++++|||||+++++|. .+..++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~ 91 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQL 91 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEE
Confidence 4588889999999999999985 44543 8888885432 223356889999999999999999999986 466889
Q ss_pred EEcccCCCcHHHHHhcCCC---------------CCCCHHHHccccC
Q 004275 733 VYEYLENNSLARALFGNAI---------------TKITYTFSLHLWN 764 (764)
Q Consensus 733 v~Ey~~~GsL~~~L~~~~~---------------~~l~~~~~~~i~h 764 (764)
||||+++|+|.+++..... .++.+.|..+|+|
T Consensus 92 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH 138 (325)
T 3kex_A 92 VTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVH 138 (325)
T ss_dssp EEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred EEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 9999999999999976421 3578888999888
No 336
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=99.11 E-value=7.8e-11 Score=123.15 Aligned_cols=104 Identities=28% Similarity=0.489 Sum_probs=84.4
Q ss_pred hcCccccCeeeccCCeeEEEEEEcCCCEEEEEEcCCc--ChhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEEc
Q 004275 658 TNNFDAANKIGEGGFGPVYKGTLSDGAVIAVKQLSSK--SKQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVYE 735 (764)
Q Consensus 658 ~~~~~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E 735 (764)
.+.|...+.||+|+||.||+|+.. ..||||.+... .....+.|.+|++++++++|+||+++++++ ..+..++|||
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e 99 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQ 99 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEE
T ss_pred ccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEE
Confidence 456888999999999999999853 46999999653 333457899999999999999999999976 4566899999
Q ss_pred ccCCCcHHHHHhcCCC---------------CCCCHHHHccccC
Q 004275 736 YLENNSLARALFGNAI---------------TKITYTFSLHLWN 764 (764)
Q Consensus 736 y~~~GsL~~~L~~~~~---------------~~l~~~~~~~i~h 764 (764)
|+++|+|.++++.... .++.+.|..+|+|
T Consensus 100 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H 143 (289)
T 3og7_A 100 WCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIH 143 (289)
T ss_dssp CCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred ecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 9999999999965431 2467778888887
No 337
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=99.11 E-value=6.7e-11 Score=124.97 Aligned_cols=104 Identities=25% Similarity=0.436 Sum_probs=85.0
Q ss_pred hcCccccCeeeccCCeeEEEEEEcCCCEEEEEEcCCc--ChhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEEc
Q 004275 658 TNNFDAANKIGEGGFGPVYKGTLSDGAVIAVKQLSSK--SKQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVYE 735 (764)
Q Consensus 658 ~~~~~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E 735 (764)
.++|...+.||+|+||.||+|... ..+|||.++.. .....+.|.+|++++.+++|||||++++++. .+..++|||
T Consensus 35 ~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e 111 (307)
T 3lb7_A 35 ASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQ 111 (307)
T ss_dssp TTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEE
T ss_pred ccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEEe
Confidence 356788899999999999999853 46899998653 2334578999999999999999999999875 566899999
Q ss_pred ccCCCcHHHHHhcCCC---------------CCCCHHHHccccC
Q 004275 736 YLENNSLARALFGNAI---------------TKITYTFSLHLWN 764 (764)
Q Consensus 736 y~~~GsL~~~L~~~~~---------------~~l~~~~~~~i~h 764 (764)
|+++|+|.++++.... .++.|.|..+|+|
T Consensus 112 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH 155 (307)
T 3lb7_A 112 WCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIH 155 (307)
T ss_dssp CCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred cCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEee
Confidence 9999999999975432 2477888888887
No 338
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.10 E-value=4.2e-11 Score=140.82 Aligned_cols=107 Identities=19% Similarity=0.347 Sum_probs=85.8
Q ss_pred hcCccccCeeeccCCeeEEEEEEc--CCCEEEEEEcCCcC-hhcHHHHHHHHHHHHhCCCCCccceEEEEEECCE-----
Q 004275 658 TNNFDAANKIGEGGFGPVYKGTLS--DGAVIAVKQLSSKS-KQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQ----- 729 (764)
Q Consensus 658 ~~~~~~~~~iG~G~~g~Vy~~~~~--~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~----- 729 (764)
.+.|...+.||+|+||.||+|+.. +|+.||||++.... ....+.|.+|++++.+++|||||++++++...+.
T Consensus 79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 158 (681)
T 2pzi_A 79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV 158 (681)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence 356889999999999999999964 68899999996533 3345678999999999999999999999987655
Q ss_pred EEEEEcccCCCcHHHHHhcCC------------CCCCCHHHHccccC
Q 004275 730 LLLVYEYLENNSLARALFGNA------------ITKITYTFSLHLWN 764 (764)
Q Consensus 730 ~~lv~Ey~~~GsL~~~L~~~~------------~~~l~~~~~~~i~h 764 (764)
.|+|||||++|+|.+++...- ..+|.|.|..+|+|
T Consensus 159 ~~lv~E~~~g~~L~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~giiH 205 (681)
T 2pzi_A 159 GYIVMEYVGGQSLKRSKGQKLPVAEAIAYLLEILPALSYLHSIGLVY 205 (681)
T ss_dssp EEEEEECCCCEECC----CCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred eEEEEEeCCCCcHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCCCee
Confidence 799999999999998876521 13577888888888
No 339
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.10 E-value=4.2e-12 Score=137.78 Aligned_cols=135 Identities=15% Similarity=0.134 Sum_probs=78.6
Q ss_pred CCCCCEEEccCCcCCccCchhhhcC-----CCCcEEecccCcCcccCCcCc-CCCCCCCEEEeeCCcCCCCCCccC----
Q 004275 108 LTFLQEVDLSRNYFNGSLPKSFARL-----QNLTKLLILGNRLSGSIPLEI-GDISTLEELVLEDNQLVGPLPENL---- 177 (764)
Q Consensus 108 L~~L~~L~Ls~N~l~~~~p~~~~~l-----~~L~~L~Ls~n~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p~~l---- 177 (764)
+++|++|+|++|.++......+..+ ++|++|+|++|.++......+ ..+++|++|+|++|.++......+
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L 150 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLL 150 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHH
T ss_pred HhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHH
Confidence 3567777777777765444444332 577777777777754322222 234567777777777654322222
Q ss_pred -CCCCCCcEEEccCccCCC----CCcccccCCCCCcEEEccCccCCCc----CcccccCCCCCCEEeeeCCcCC
Q 004275 178 -GNLKSLRRILLSSNNFTG----SIPESYGNLKNLTEFRIDGSNLTGR----IPNFIGNWTKLDRLDLQGTSLE 242 (764)
Q Consensus 178 -~~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~L~~n~l~~~----~p~~~~~l~~L~~L~L~~N~l~ 242 (764)
...++|++|+|++|.++. .++..+..+++|++|+|++|.++.. ++..+...++|+.|+|++|.++
T Consensus 151 ~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~ 224 (372)
T 3un9_A 151 LHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAG 224 (372)
T ss_dssp HSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCC
T ss_pred HhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCC
Confidence 234667777777777653 2333445566677777777666532 2344455566666666666665
No 340
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=99.10 E-value=4.1e-11 Score=129.99 Aligned_cols=106 Identities=17% Similarity=0.366 Sum_probs=82.1
Q ss_pred hcCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCc--ChhcHHHHHHHHHHHHhCCCCCccceEEEEEECC------
Q 004275 658 TNNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSK--SKQGNREFVNEIGMISALQHQNLVKLYGCCIEGN------ 728 (764)
Q Consensus 658 ~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~------ 728 (764)
.+.|...+.||+|+||.||+|.. .+|+.||||++... .....+.+.+|++++++++|||||++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 45688899999999999999995 57899999999653 2333567899999999999999999999997653
Q ss_pred EEEEEEcccCCCcHHHHHhcCCC-------------CCCCHHHHccccC
Q 004275 729 QLLLVYEYLENNSLARALFGNAI-------------TKITYTFSLHLWN 764 (764)
Q Consensus 729 ~~~lv~Ey~~~GsL~~~L~~~~~-------------~~l~~~~~~~i~h 764 (764)
..++||||| +++|.+++..... .++.|.|..+|+|
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~ivH 151 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIH 151 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred eEEEEEecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 459999999 7899999976431 3578889999888
No 341
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=99.10 E-value=1.6e-10 Score=121.11 Aligned_cols=105 Identities=30% Similarity=0.538 Sum_probs=86.4
Q ss_pred cCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcCh--hcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEEc
Q 004275 659 NNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKSK--QGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVYE 735 (764)
Q Consensus 659 ~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E 735 (764)
++|+..+.||+|+||.||+|+. .+|+.||||++..... ...+.+.+|++++++++||||+++++++...+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 82 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence 5688899999999999999996 4789999999965432 234678999999999999999999999999999999999
Q ss_pred ccCCCcHHHHHhcCCC----------------CCCCHHHHccccC
Q 004275 736 YLENNSLARALFGNAI----------------TKITYTFSLHLWN 764 (764)
Q Consensus 736 y~~~GsL~~~L~~~~~----------------~~l~~~~~~~i~h 764 (764)
|++ |+|.+++..... .++.+.|..+|+|
T Consensus 83 ~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H 126 (299)
T 2r3i_A 83 FLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 126 (299)
T ss_dssp CCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred ccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHCCccC
Confidence 998 699999976532 2467788888887
No 342
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=99.10 E-value=5.8e-11 Score=126.34 Aligned_cols=111 Identities=23% Similarity=0.449 Sum_probs=92.0
Q ss_pred HHHHhhcCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcChhcHHHHHHHHHHHHhC-CCCCccceEEEEEE----
Q 004275 653 QIKAATNNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKSKQGNREFVNEIGMISAL-QHQNLVKLYGCCIE---- 726 (764)
Q Consensus 653 ~~~~~~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~---- 726 (764)
++....+.|...+.||+|+||.||+|+. .+|+.||||.+..... ..+++.+|++++.++ +||||+++++++..
T Consensus 18 ~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~ 96 (326)
T 2x7f_A 18 ALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD-EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPP 96 (326)
T ss_dssp CCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS-TTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--
T ss_pred hccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcc-cHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCc
Confidence 3344567899999999999999999995 5789999999865432 346799999999998 79999999999987
Q ss_pred --CCEEEEEEcccCCCcHHHHHhcCCC----------------CCCCHHHHccccC
Q 004275 727 --GNQLLLVYEYLENNSLARALFGNAI----------------TKITYTFSLHLWN 764 (764)
Q Consensus 727 --~~~~~lv~Ey~~~GsL~~~L~~~~~----------------~~l~~~~~~~i~h 764 (764)
.+..++||||+++|+|.+++..... .++.+.|..+|+|
T Consensus 97 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH 152 (326)
T 2x7f_A 97 GMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIH 152 (326)
T ss_dssp CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred cccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 4678999999999999999975321 2467788888887
No 343
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=99.10 E-value=5e-11 Score=133.49 Aligned_cols=106 Identities=19% Similarity=0.291 Sum_probs=86.7
Q ss_pred hcCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCc--ChhcHHHHHHHHHHHHhCCCCCccceEEEEEEC------C
Q 004275 658 TNNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSK--SKQGNREFVNEIGMISALQHQNLVKLYGCCIEG------N 728 (764)
Q Consensus 658 ~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~------~ 728 (764)
.++|+..+.||+|+||.||+|.. .+|+.||||++... .....+.+.+|++++++++|||||++++++... .
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 46788999999999999999984 57889999999753 333456789999999999999999999999754 3
Q ss_pred EEEEEEcccCCCcHHHHHhcCC------------CCCCCHHHHccccC
Q 004275 729 QLLLVYEYLENNSLARALFGNA------------ITKITYTFSLHLWN 764 (764)
Q Consensus 729 ~~~lv~Ey~~~GsL~~~L~~~~------------~~~l~~~~~~~i~h 764 (764)
..++|||||+++ |.+.+.... ..+|.|.|..+|+|
T Consensus 141 ~~~lv~E~~~~~-l~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~iiH 187 (464)
T 3ttj_A 141 DVYLVMELMDAN-LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIH 187 (464)
T ss_dssp EEEEEEECCSEE-HHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred eEEEEEeCCCCC-HHHHHhhcCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 579999999875 766665431 13688999999998
No 344
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=99.09 E-value=1.2e-10 Score=124.13 Aligned_cols=106 Identities=23% Similarity=0.463 Sum_probs=86.5
Q ss_pred hcCccccCeeeccCCeeEEEEEE-cCCC----EEEEEEcCCc-ChhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEE
Q 004275 658 TNNFDAANKIGEGGFGPVYKGTL-SDGA----VIAVKQLSSK-SKQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLL 731 (764)
Q Consensus 658 ~~~~~~~~~iG~G~~g~Vy~~~~-~~g~----~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 731 (764)
.++|+..+.||+|+||.||+|.. .+++ .||+|.+... .....+++.+|++++.+++|||||+++++|.... .+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~ 92 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EE
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ce
Confidence 35688899999999999999984 4444 3588887543 3345678999999999999999999999998654 78
Q ss_pred EEEcccCCCcHHHHHhcCCC---------------CCCCHHHHccccC
Q 004275 732 LVYEYLENNSLARALFGNAI---------------TKITYTFSLHLWN 764 (764)
Q Consensus 732 lv~Ey~~~GsL~~~L~~~~~---------------~~l~~~~~~~i~h 764 (764)
+|+||+++|+|.+++..... .++.+.|..+|+|
T Consensus 93 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH 140 (327)
T 3lzb_A 93 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 140 (327)
T ss_dssp EEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred EEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCCcC
Confidence 99999999999999976431 2578888888888
No 345
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=99.09 E-value=1.3e-10 Score=126.30 Aligned_cols=106 Identities=17% Similarity=0.270 Sum_probs=87.4
Q ss_pred hcCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCc--ChhcHHHHHHHHHHHHhCCCCCccceEEEEEECC------
Q 004275 658 TNNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSK--SKQGNREFVNEIGMISALQHQNLVKLYGCCIEGN------ 728 (764)
Q Consensus 658 ~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~------ 728 (764)
.++|...+.||+|+||.||+|.. .+++.||||++... .....+.+.+|++++++++|||||++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 45688999999999999999984 56889999999653 2334567899999999999999999999997654
Q ss_pred EEEEEEcccCCCcHHHHHhcCC------------CCCCCHHHHccccC
Q 004275 729 QLLLVYEYLENNSLARALFGNA------------ITKITYTFSLHLWN 764 (764)
Q Consensus 729 ~~~lv~Ey~~~GsL~~~L~~~~------------~~~l~~~~~~~i~h 764 (764)
..++||||+++ +|.+++.... ..++.+.|..+|+|
T Consensus 104 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH 150 (371)
T 2xrw_A 104 DVYIVMELMDA-NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIH 150 (371)
T ss_dssp EEEEEEECCSE-EHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred ceEEEEEcCCC-CHHHHHhhccCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 78999999985 7888886432 13578889999988
No 346
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=99.09 E-value=8.9e-11 Score=125.17 Aligned_cols=115 Identities=16% Similarity=0.272 Sum_probs=90.4
Q ss_pred cHHHHHHhhcCcccc-CeeeccCCeeEEEEEE-cCCCEEEEEEcCCcC--hhcHHHHHHHHHHHHhCC-CCCccceEEEE
Q 004275 650 TLRQIKAATNNFDAA-NKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKS--KQGNREFVNEIGMISALQ-HQNLVKLYGCC 724 (764)
Q Consensus 650 ~~~~~~~~~~~~~~~-~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~-H~niv~l~g~~ 724 (764)
.+.......+.|... +.||+|+||.||+|.. .+++.||||.+.... .....++.+|++++.+++ ||||+++++++
T Consensus 19 ~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~ 98 (327)
T 3lm5_A 19 YFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVY 98 (327)
T ss_dssp CSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEE
T ss_pred HHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEE
Confidence 333334444456665 7899999999999985 468999999997532 233578999999999995 69999999999
Q ss_pred EECCEEEEEEcccCCCcHHHHHhcCCC----------------CCCCHHHHccccC
Q 004275 725 IEGNQLLLVYEYLENNSLARALFGNAI----------------TKITYTFSLHLWN 764 (764)
Q Consensus 725 ~~~~~~~lv~Ey~~~GsL~~~L~~~~~----------------~~l~~~~~~~i~h 764 (764)
...+..++||||+++|+|.+++..... .++.+.|..+|+|
T Consensus 99 ~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~givH 154 (327)
T 3lm5_A 99 ENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVH 154 (327)
T ss_dssp ECSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred EeCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 999999999999999999999865422 2466777777776
No 347
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.08 E-value=4.5e-11 Score=127.97 Aligned_cols=105 Identities=21% Similarity=0.304 Sum_probs=83.3
Q ss_pred cCccccCeeeccCCeeEEEEEEcCCCEEEEEEcCCcC--------hhcHHHHHHHHHHHHhCC---------CCCccceE
Q 004275 659 NNFDAANKIGEGGFGPVYKGTLSDGAVIAVKQLSSKS--------KQGNREFVNEIGMISALQ---------HQNLVKLY 721 (764)
Q Consensus 659 ~~~~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~--------~~~~~~f~~E~~~l~~l~---------H~niv~l~ 721 (764)
++|...+.||+|+||.||+|+. +|+.||||++.... ....+.+.+|++++++++ |+|||++.
T Consensus 20 ~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~ 98 (336)
T 2vuw_A 20 EKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLN 98 (336)
T ss_dssp HHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEE
T ss_pred ccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhc
Confidence 4577889999999999999987 78999999996532 123478999999999885 88888888
Q ss_pred EEEEE------------------------------CCEEEEEEcccCCCcHHHHHhcCC-------------CCCCCHHH
Q 004275 722 GCCIE------------------------------GNQLLLVYEYLENNSLARALFGNA-------------ITKITYTF 758 (764)
Q Consensus 722 g~~~~------------------------------~~~~~lv~Ey~~~GsL~~~L~~~~-------------~~~l~~~~ 758 (764)
+++.. .+..++|||||++|++.+.+.+.. ..+|.|.|
T Consensus 99 ~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~~~~~~~~~~~i~~qi~~aL~~lH 178 (336)
T 2vuw_A 99 SVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRTKLSSLATAKSILHQLTASLAVAE 178 (336)
T ss_dssp EEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTTTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHhcCCCHHHHHHHHHHHHHHHHHHH
Confidence 87542 578999999999998766664432 13588899
Q ss_pred -HccccC
Q 004275 759 -SLHLWN 764 (764)
Q Consensus 759 -~~~i~h 764 (764)
..+|+|
T Consensus 179 ~~~~ivH 185 (336)
T 2vuw_A 179 ASLRFEH 185 (336)
T ss_dssp HHHCCBC
T ss_pred HhCCEeE
Confidence 899998
No 348
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=99.08 E-value=1.7e-10 Score=134.71 Aligned_cols=106 Identities=23% Similarity=0.333 Sum_probs=87.1
Q ss_pred hcCccccCeeeccCCeeEEEEEEc----CCCEEEEEEcCCcC-hhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEE
Q 004275 658 TNNFDAANKIGEGGFGPVYKGTLS----DGAVIAVKQLSSKS-KQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLL 732 (764)
Q Consensus 658 ~~~~~~~~~iG~G~~g~Vy~~~~~----~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 732 (764)
.+.|...+.||+|+||.||+|... .+..||||.+.... ....+.|.+|++++++++|||||++++++. .+..++
T Consensus 389 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~l 467 (656)
T 2j0j_A 389 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI 467 (656)
T ss_dssp GGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEE
T ss_pred cccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceEE
Confidence 456888899999999999999863 24579999987543 334578999999999999999999999984 567899
Q ss_pred EEcccCCCcHHHHHhcCCC---------------CCCCHHHHccccC
Q 004275 733 VYEYLENNSLARALFGNAI---------------TKITYTFSLHLWN 764 (764)
Q Consensus 733 v~Ey~~~GsL~~~L~~~~~---------------~~l~~~~~~~i~h 764 (764)
||||+++|+|.+++..... .++.|.|..+|+|
T Consensus 468 v~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH 514 (656)
T 2j0j_A 468 IMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVH 514 (656)
T ss_dssp EEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred EEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 9999999999999975431 2477788888887
No 349
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=99.08 E-value=1e-10 Score=125.85 Aligned_cols=106 Identities=17% Similarity=0.389 Sum_probs=88.4
Q ss_pred hcCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcC-hhcHHHHHHHHHHHHhCCCCCccceEEEEEEC-----CEE
Q 004275 658 TNNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKS-KQGNREFVNEIGMISALQHQNLVKLYGCCIEG-----NQL 730 (764)
Q Consensus 658 ~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~-----~~~ 730 (764)
.++|...+.||+|+||.||+|+. .+|+.||||++.... .....++.+|++++++++||||+++++++... ...
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 89 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV 89 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence 46788999999999999999995 468899999997533 33456789999999999999999999998764 678
Q ss_pred EEEEcccCCCcHHHHHhcCCC-------------CCCCHHHHccccC
Q 004275 731 LLVYEYLENNSLARALFGNAI-------------TKITYTFSLHLWN 764 (764)
Q Consensus 731 ~lv~Ey~~~GsL~~~L~~~~~-------------~~l~~~~~~~i~h 764 (764)
++||||++ |+|.+++..... .++.+.|..+|+|
T Consensus 90 ~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH 135 (353)
T 2b9h_A 90 YIIQELMQ-TDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIH 135 (353)
T ss_dssp EEEECCCS-EEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred EEEEeccC-ccHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 99999998 699999876431 3578888888888
No 350
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.08 E-value=1.2e-12 Score=142.12 Aligned_cols=167 Identities=17% Similarity=0.178 Sum_probs=124.9
Q ss_pred eeEEEEEcCCCcccccCCcc----CC-CCCCCCEEEccCCcCCccCchhh-hcCCCCcEEecccCcCcccCCcCc-----
Q 004275 85 CHVTVILLKGFNLAGVIPEE----FG-NLTFLQEVDLSRNYFNGSLPKSF-ARLQNLTKLLILGNRLSGSIPLEI----- 153 (764)
Q Consensus 85 ~~v~~L~L~~~~l~g~~p~~----l~-~L~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~Ls~n~l~~~~p~~~----- 153 (764)
.+++.|+|++|.++...... +. ..++|++|||++|.++......+ ..+++|++|+|++|.++..-...+
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 35889999999987543333 22 33799999999999975444333 356899999999999975444443
Q ss_pred CCCCCCCEEEeeCCcCCC----CCCccCCCCCCCcEEEccCccCCC----CCcccccCCCCCcEEEccCccCCCc----C
Q 004275 154 GDISTLEELVLEDNQLVG----PLPENLGNLKSLRRILLSSNNFTG----SIPESYGNLKNLTEFRIDGSNLTGR----I 221 (764)
Q Consensus 154 ~~l~~L~~L~Ls~N~l~~----~~p~~l~~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~L~~n~l~~~----~ 221 (764)
...++|++|+|++|.++. .++..+..+++|++|+|++|.++. .++..+...++|++|+|++|.++.. +
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l 231 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALAL 231 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHH
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHH
Confidence 356889999999999864 244455778999999999999874 2356677888999999999999753 3
Q ss_pred cccccCCCCCCEEeeeCCcCCCCCccchhc
Q 004275 222 PNFIGNWTKLDRLDLQGTSLEGPIPSTISQ 251 (764)
Q Consensus 222 p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~ 251 (764)
...+...++|++|+|++|.++......+..
T Consensus 232 ~~~L~~~~~L~~L~Ls~N~i~~~g~~~L~~ 261 (372)
T 3un9_A 232 ARAAREHPSLELLHLYFNELSSEGRQVLRD 261 (372)
T ss_dssp HHHHHHCSSCCEEECTTSSCCHHHHHHHHH
T ss_pred HHHHHhCCCCCEEeccCCCCCHHHHHHHHH
Confidence 445556788999999999987544444443
No 351
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=99.08 E-value=1.6e-10 Score=124.32 Aligned_cols=105 Identities=25% Similarity=0.460 Sum_probs=86.4
Q ss_pred cCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcC--hhcHHHHHHHHHHHHhCCCCCccceEEEEEEC--------
Q 004275 659 NNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKS--KQGNREFVNEIGMISALQHQNLVKLYGCCIEG-------- 727 (764)
Q Consensus 659 ~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~-------- 727 (764)
++|...+.||+|+||.||+|+. .+|+.||||++.... ......+.+|++++.+++|||||++++++...
T Consensus 17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 96 (351)
T 3mi9_A 17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK 96 (351)
T ss_dssp GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------
T ss_pred cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCC
Confidence 5688899999999999999996 678999999986533 22346788999999999999999999999874
Q ss_pred CEEEEEEcccCCCcHHHHHhcCCC---------------CCCCHHHHccccC
Q 004275 728 NQLLLVYEYLENNSLARALFGNAI---------------TKITYTFSLHLWN 764 (764)
Q Consensus 728 ~~~~lv~Ey~~~GsL~~~L~~~~~---------------~~l~~~~~~~i~h 764 (764)
+..++||||+++ +|.+.+..... .++.+.|..+|+|
T Consensus 97 ~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH 147 (351)
T 3mi9_A 97 GSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILH 147 (351)
T ss_dssp CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred ceEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeC
Confidence 468999999995 78888765421 3577888888887
No 352
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=99.07 E-value=6.7e-11 Score=123.52 Aligned_cols=105 Identities=27% Similarity=0.468 Sum_probs=78.9
Q ss_pred cCccccCeeeccCCeeEEEEEEc--CCC--EEEEEEcCCcC---hhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEE
Q 004275 659 NNFDAANKIGEGGFGPVYKGTLS--DGA--VIAVKQLSSKS---KQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLL 731 (764)
Q Consensus 659 ~~~~~~~~iG~G~~g~Vy~~~~~--~g~--~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 731 (764)
++|+..+.||+|+||.||+|+.. ++. .||||++.... ....++|.+|++++.+++||||+++++++...+ .+
T Consensus 18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~ 96 (291)
T 1u46_A 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MK 96 (291)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CE
T ss_pred hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ce
Confidence 45888899999999999999853 333 68999987532 234578999999999999999999999997654 88
Q ss_pred EEEcccCCCcHHHHHhcCC---------------CCCCCHHHHccccC
Q 004275 732 LVYEYLENNSLARALFGNA---------------ITKITYTFSLHLWN 764 (764)
Q Consensus 732 lv~Ey~~~GsL~~~L~~~~---------------~~~l~~~~~~~i~h 764 (764)
+||||+++|+|.+++.... ..++.+.|..+|+|
T Consensus 97 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H 144 (291)
T 1u46_A 97 MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIH 144 (291)
T ss_dssp EEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred eeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 9999999999999997532 13477888888887
No 353
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.06 E-value=6.6e-11 Score=138.51 Aligned_cols=108 Identities=19% Similarity=0.230 Sum_probs=90.8
Q ss_pred hhcCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcC---hhcHHHHHHHHHHHHhC-CCCCccceEEEEEECCEEE
Q 004275 657 ATNNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKS---KQGNREFVNEIGMISAL-QHQNLVKLYGCCIEGNQLL 731 (764)
Q Consensus 657 ~~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~ 731 (764)
..++|+..++||+|+||.||+|+. .+++.||||++.... ....+.+.+|.+++..+ +|++|+++++++.+.+..|
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~ 418 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 418 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence 346799999999999999999995 568899999996531 22346788999999987 7999999999999999999
Q ss_pred EEEcccCCCcHHHHHhcCCC--------------CCCCHHHHccccC
Q 004275 732 LVYEYLENNSLARALFGNAI--------------TKITYTFSLHLWN 764 (764)
Q Consensus 732 lv~Ey~~~GsL~~~L~~~~~--------------~~l~~~~~~~i~h 764 (764)
+|||||++|+|.++++.... .+|.|.|..+|+|
T Consensus 419 lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~gIiH 465 (674)
T 3pfq_A 419 FVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIY 465 (674)
T ss_dssp EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTSEEC
T ss_pred EEEeCcCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEe
Confidence 99999999999999975321 3588999999988
No 354
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=99.05 E-value=3e-10 Score=124.65 Aligned_cols=101 Identities=19% Similarity=0.224 Sum_probs=81.0
Q ss_pred cCcccc-CeeeccCCeeEEEEEE-cCCCEEEEEEcCCcChhcHHHHHHHHHHHHh-CCCCCccceEEEEEE----CCEEE
Q 004275 659 NNFDAA-NKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKSKQGNREFVNEIGMISA-LQHQNLVKLYGCCIE----GNQLL 731 (764)
Q Consensus 659 ~~~~~~-~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~-l~H~niv~l~g~~~~----~~~~~ 731 (764)
++|... ++||+|+||+||+|.. .+|+.||||++... ..+.+|++++.+ .+|||||++++++.. .+..+
T Consensus 61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~ 135 (400)
T 1nxk_A 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 135 (400)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEE
Confidence 345554 6899999999999985 57899999999632 457788888754 589999999999876 45689
Q ss_pred EEEcccCCCcHHHHHhcCCC----------------CCCCHHHHccccC
Q 004275 732 LVYEYLENNSLARALFGNAI----------------TKITYTFSLHLWN 764 (764)
Q Consensus 732 lv~Ey~~~GsL~~~L~~~~~----------------~~l~~~~~~~i~h 764 (764)
+|||||++|+|.+++..... .+|.|.|..+|+|
T Consensus 136 lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH 184 (400)
T 1nxk_A 136 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 184 (400)
T ss_dssp EEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred EEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 99999999999999986532 2477788888887
No 355
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=99.05 E-value=4.5e-11 Score=126.36 Aligned_cols=108 Identities=19% Similarity=0.292 Sum_probs=81.5
Q ss_pred hhcCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcChh------cHHHHHHHHHHHHhC----CCCCccceEEEEE
Q 004275 657 ATNNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKSKQ------GNREFVNEIGMISAL----QHQNLVKLYGCCI 725 (764)
Q Consensus 657 ~~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~------~~~~f~~E~~~l~~l----~H~niv~l~g~~~ 725 (764)
..++|...+.||+|+||.||+|+. .+++.||||.+...... ....+.+|++++.++ +|+||+++++++.
T Consensus 29 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~ 108 (312)
T 2iwi_A 29 FEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFE 108 (312)
T ss_dssp ----CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC-
T ss_pred hhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEe
Confidence 456799999999999999999984 57889999999654321 223467899999988 8999999999999
Q ss_pred ECCEEEEEEcc-cCCCcHHHHHhcCCC--------------CCCCHHHHccccC
Q 004275 726 EGNQLLLVYEY-LENNSLARALFGNAI--------------TKITYTFSLHLWN 764 (764)
Q Consensus 726 ~~~~~~lv~Ey-~~~GsL~~~L~~~~~--------------~~l~~~~~~~i~h 764 (764)
..+..++|||| +++|+|.+++..... .++.+.|..+|+|
T Consensus 109 ~~~~~~~v~e~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H 162 (312)
T 2iwi_A 109 TQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRGVVH 162 (312)
T ss_dssp ----CEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTEEC
T ss_pred cCCeEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeee
Confidence 98999999999 899999999975421 3477888888887
No 356
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=99.05 E-value=1.7e-10 Score=124.96 Aligned_cols=106 Identities=18% Similarity=0.317 Sum_probs=87.8
Q ss_pred hcCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcC-hhcHHHHHHHHHHHHhCCCCCccceEEEEEEC-----CEE
Q 004275 658 TNNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKS-KQGNREFVNEIGMISALQHQNLVKLYGCCIEG-----NQL 730 (764)
Q Consensus 658 ~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~-----~~~ 730 (764)
...|...+.||+|+||.||+|.. .+++.||||++.... ....+.+.+|++++.+++|||||++++++... ...
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 105 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV 105 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence 45688999999999999999985 478899999997533 33347799999999999999999999999765 368
Q ss_pred EEEEcccCCCcHHHHHhcCCC-------------CCCCHHHHccccC
Q 004275 731 LLVYEYLENNSLARALFGNAI-------------TKITYTFSLHLWN 764 (764)
Q Consensus 731 ~lv~Ey~~~GsL~~~L~~~~~-------------~~l~~~~~~~i~h 764 (764)
++||||++ |+|.+++..... .++.+.|..+|+|
T Consensus 106 ~iv~e~~~-~~L~~~l~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH 151 (364)
T 3qyz_A 106 YIVQDLME-TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLH 151 (364)
T ss_dssp EEEEECCS-EEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred EEEEcccC-cCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 99999998 599999876431 3577888888887
No 357
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=99.05 E-value=2.5e-10 Score=126.77 Aligned_cols=101 Identities=18% Similarity=0.200 Sum_probs=83.1
Q ss_pred CccccCeeeccCCeeEEEEEEcCCCEEEEEEcCCcChhcHHHHHHHHHHHHhC-CCCCccceEEEEEECCEEEEEEcccC
Q 004275 660 NFDAANKIGEGGFGPVYKGTLSDGAVIAVKQLSSKSKQGNREFVNEIGMISAL-QHQNLVKLYGCCIEGNQLLLVYEYLE 738 (764)
Q Consensus 660 ~~~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~Ey~~ 738 (764)
.+...++||+|+||+||.+...+|+.||||++... ..+.+.+|++++.++ +|||||++++++.+.+..++|||||+
T Consensus 16 ~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~ 92 (434)
T 2rio_A 16 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN 92 (434)
T ss_dssp CEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS
T ss_pred eeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC
Confidence 34556889999999998776678999999998643 235678999999876 89999999999999999999999996
Q ss_pred CCcHHHHHhcCCC---------------------CCCCHHHHccccC
Q 004275 739 NNSLARALFGNAI---------------------TKITYTFSLHLWN 764 (764)
Q Consensus 739 ~GsL~~~L~~~~~---------------------~~l~~~~~~~i~h 764 (764)
|+|.+++..... .++.|.|..+|+|
T Consensus 93 -gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH 138 (434)
T 2rio_A 93 -LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIH 138 (434)
T ss_dssp -EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTEEC
T ss_pred -CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccc
Confidence 699999975421 2467888888888
No 358
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=99.05 E-value=4.7e-10 Score=117.85 Aligned_cols=101 Identities=20% Similarity=0.244 Sum_probs=82.6
Q ss_pred cCcccc-CeeeccCCeeEEEEEE-cCCCEEEEEEcCCcChhcHHHHHHHHHHH-HhCCCCCccceEEEEEE----CCEEE
Q 004275 659 NNFDAA-NKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKSKQGNREFVNEIGMI-SALQHQNLVKLYGCCIE----GNQLL 731 (764)
Q Consensus 659 ~~~~~~-~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l-~~l~H~niv~l~g~~~~----~~~~~ 731 (764)
++|... +.||+|+||.||++.. .+++.||||++... ..+.+|++++ ...+||||+++++++.. ....+
T Consensus 17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 91 (299)
T 3m2w_A 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 91 (299)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc-----HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEE
Confidence 446565 7899999999999985 57899999999542 4677899888 55689999999999987 66789
Q ss_pred EEEcccCCCcHHHHHhcCCC----------------CCCCHHHHccccC
Q 004275 732 LVYEYLENNSLARALFGNAI----------------TKITYTFSLHLWN 764 (764)
Q Consensus 732 lv~Ey~~~GsL~~~L~~~~~----------------~~l~~~~~~~i~h 764 (764)
+||||+++|+|.+++..... .++.+.|..+|+|
T Consensus 92 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H 140 (299)
T 3m2w_A 92 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 140 (299)
T ss_dssp EEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred EEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 99999999999999986542 2467777777777
No 359
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=99.04 E-value=6.5e-11 Score=126.31 Aligned_cols=105 Identities=22% Similarity=0.322 Sum_probs=85.1
Q ss_pred cCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcChhcHHHHHHHHHHHHhCC-CCCccceEEEEEE--------CC
Q 004275 659 NNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKSKQGNREFVNEIGMISALQ-HQNLVKLYGCCIE--------GN 728 (764)
Q Consensus 659 ~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~--------~~ 728 (764)
.+|...+.||+|+||.||+|+. .+++.||||++........+.+.+|++++.+++ |||||++++++.. ..
T Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~ 107 (337)
T 3ll6_A 28 LRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQA 107 (337)
T ss_dssp EEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSE
T ss_pred ceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCc
Confidence 4588889999999999999995 578999999996655555678999999999996 9999999999953 33
Q ss_pred EEEEEEcccCCCcHHHHHhcC--CC---------------CCCCHHHHcc--ccC
Q 004275 729 QLLLVYEYLENNSLARALFGN--AI---------------TKITYTFSLH--LWN 764 (764)
Q Consensus 729 ~~~lv~Ey~~~GsL~~~L~~~--~~---------------~~l~~~~~~~--i~h 764 (764)
..++||||++ |+|.+++... .. .++.|.|..+ |+|
T Consensus 108 ~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH 161 (337)
T 3ll6_A 108 EFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIH 161 (337)
T ss_dssp EEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBC
T ss_pred eEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEE
Confidence 5799999997 7999998641 10 2466777777 777
No 360
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=99.04 E-value=2.5e-10 Score=120.06 Aligned_cols=106 Identities=23% Similarity=0.322 Sum_probs=83.4
Q ss_pred hcCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcC----hhcHHHHHHHHHHHHhCCCCCccceEEEEE--ECCEE
Q 004275 658 TNNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKS----KQGNREFVNEIGMISALQHQNLVKLYGCCI--EGNQL 730 (764)
Q Consensus 658 ~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~----~~~~~~f~~E~~~l~~l~H~niv~l~g~~~--~~~~~ 730 (764)
.++|...+.||+|+||.||++.. .+++.||||.+.... ....+.+.+|++++.+++|+||+++++++. ..+..
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 35788999999999999999995 578899999997532 223567999999999999999999999985 34578
Q ss_pred EEEEcccCCCcHHHHHhcCCC----------------CCCCHHHHccccC
Q 004275 731 LLVYEYLENNSLARALFGNAI----------------TKITYTFSLHLWN 764 (764)
Q Consensus 731 ~lv~Ey~~~GsL~~~L~~~~~----------------~~l~~~~~~~i~h 764 (764)
++||||+++| |.+++..... .++.+.|..+|+|
T Consensus 84 ~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H 132 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVH 132 (305)
T ss_dssp EEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred EEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCCeee
Confidence 9999999987 7777765322 2466777777777
No 361
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=99.04 E-value=2.5e-10 Score=119.55 Aligned_cols=104 Identities=22% Similarity=0.293 Sum_probs=87.5
Q ss_pred hcCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcChhcHHHHHHHHHHHHhC-CCCCccceEEEEEECCEEEEEEc
Q 004275 658 TNNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKSKQGNREFVNEIGMISAL-QHQNLVKLYGCCIEGNQLLLVYE 735 (764)
Q Consensus 658 ~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~E 735 (764)
.++|...+.||+|+||.||+|+. .+|+.||||.+.... ..+++.+|++++.++ +|+|++++++++......++|||
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e 86 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID 86 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEE
Confidence 35688899999999999999994 678999999986432 224688999999999 79999999999999999999999
Q ss_pred ccCCCcHHHHHhcCCC---------------CCCCHHHHccccC
Q 004275 736 YLENNSLARALFGNAI---------------TKITYTFSLHLWN 764 (764)
Q Consensus 736 y~~~GsL~~~L~~~~~---------------~~l~~~~~~~i~h 764 (764)
|+ +|+|.+++..... .++.+.|..+|+|
T Consensus 87 ~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH 129 (298)
T 1csn_A 87 LL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVY 129 (298)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEEC
T ss_pred ec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCEec
Confidence 99 9999999985421 2467788888877
No 362
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=99.04 E-value=2.8e-11 Score=131.81 Aligned_cols=106 Identities=10% Similarity=0.097 Sum_probs=82.7
Q ss_pred hcCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCc---ChhcHHHHHHHH---HHHHhCCCCCccceE-------EE
Q 004275 658 TNNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSK---SKQGNREFVNEI---GMISALQHQNLVKLY-------GC 723 (764)
Q Consensus 658 ~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~---~~~~~~~f~~E~---~~l~~l~H~niv~l~-------g~ 723 (764)
.+.|...+.||+|+||.||+|+. .+|+.||||++... .....+.|.+|+ +.+++++|||||+++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 45688889999999999999994 67999999999632 233457899999 556667899999998 66
Q ss_pred EEECC-----------------EEEEEEcccCCCcHHHHHhcCC---------------------CCCCCHHHHccccC
Q 004275 724 CIEGN-----------------QLLLVYEYLENNSLARALFGNA---------------------ITKITYTFSLHLWN 764 (764)
Q Consensus 724 ~~~~~-----------------~~~lv~Ey~~~GsL~~~L~~~~---------------------~~~l~~~~~~~i~h 764 (764)
+...+ ..++||||+ +|+|.+++.... ..+|.|.|..+|+|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH 229 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVH 229 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 65443 278999999 689999997421 13577888888888
No 363
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=99.04 E-value=2.6e-11 Score=139.65 Aligned_cols=106 Identities=24% Similarity=0.362 Sum_probs=87.5
Q ss_pred cCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCc-ChhcHHHHHHHHHHHHhCCCCCccceEEEEEE------CCEE
Q 004275 659 NNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSK-SKQGNREFVNEIGMISALQHQNLVKLYGCCIE------GNQL 730 (764)
Q Consensus 659 ~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~------~~~~ 730 (764)
++|...+.||+|+||.||+|.. .+|+.||||++... .....+.|.+|++++.+++|||||++++++.. .+..
T Consensus 14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~ 93 (676)
T 3qa8_A 14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLP 93 (676)
T ss_dssp ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSC
T ss_pred CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeE
Confidence 5688999999999999999985 57899999999754 33445779999999999999999999998765 5677
Q ss_pred EEEEcccCCCcHHHHHhcCCC-----------------CCCCHHHHccccC
Q 004275 731 LLVYEYLENNSLARALFGNAI-----------------TKITYTFSLHLWN 764 (764)
Q Consensus 731 ~lv~Ey~~~GsL~~~L~~~~~-----------------~~l~~~~~~~i~h 764 (764)
++|||||++|+|.+++..... .++.+.|..+|+|
T Consensus 94 ~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~gIVH 144 (676)
T 3qa8_A 94 LLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIH 144 (676)
T ss_dssp CCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTTBCC
T ss_pred EEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCCcc
Confidence 999999999999999986431 2477888888888
No 364
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=99.03 E-value=2.6e-10 Score=120.58 Aligned_cols=106 Identities=20% Similarity=0.285 Sum_probs=89.4
Q ss_pred hcCccccCeeeccCCeeEEEEEEcCCCEEEEEEcCCc--ChhcHHHHHHHHHHHHhCC--CCCccceEEEEEECCEEEEE
Q 004275 658 TNNFDAANKIGEGGFGPVYKGTLSDGAVIAVKQLSSK--SKQGNREFVNEIGMISALQ--HQNLVKLYGCCIEGNQLLLV 733 (764)
Q Consensus 658 ~~~~~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~--H~niv~l~g~~~~~~~~~lv 733 (764)
.+.|...+.||+|+||.||++...+++.||||.+... .....+.+.+|++++.+++ |+||+++++++...+..++|
T Consensus 27 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 106 (313)
T 3cek_A 27 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 106 (313)
T ss_dssp TEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEE
T ss_pred cceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEE
Confidence 4568889999999999999999888999999999643 3334578999999999997 59999999999999999999
Q ss_pred EcccCCCcHHHHHhcCCC--------------CCCCHHHHccccC
Q 004275 734 YEYLENNSLARALFGNAI--------------TKITYTFSLHLWN 764 (764)
Q Consensus 734 ~Ey~~~GsL~~~L~~~~~--------------~~l~~~~~~~i~h 764 (764)
|| +.+|+|.+++..... .++.+.|..+|+|
T Consensus 107 ~e-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH 150 (313)
T 3cek_A 107 ME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVH 150 (313)
T ss_dssp EC-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred Ee-cCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcee
Confidence 99 678899999976432 2467788888887
No 365
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=99.03 E-value=1.7e-10 Score=125.29 Aligned_cols=106 Identities=20% Similarity=0.369 Sum_probs=87.2
Q ss_pred hcCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCc--ChhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEE----
Q 004275 658 TNNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSK--SKQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQL---- 730 (764)
Q Consensus 658 ~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~---- 730 (764)
.+.|...+.||+|+||.||+|.. .+|+.||||++... .....+.+.+|++++++++|||||++++++...+..
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 120 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 120 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence 45688889999999999999984 57889999999753 233357889999999999999999999999876654
Q ss_pred --EEEEcccCCCcHHHHHhcCC------------CCCCCHHHHccccC
Q 004275 731 --LLVYEYLENNSLARALFGNA------------ITKITYTFSLHLWN 764 (764)
Q Consensus 731 --~lv~Ey~~~GsL~~~L~~~~------------~~~l~~~~~~~i~h 764 (764)
++||||++ |+|.+++...- ..++.|.|..+|+|
T Consensus 121 ~~~lv~e~~~-~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH 167 (371)
T 4exu_A 121 DFYLVMPFMQ-TDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSAGVVH 167 (371)
T ss_dssp CCEEEEECCC-EEHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred eEEEEEcccc-ccHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHCCCcC
Confidence 99999998 68988875431 13578888888888
No 366
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=99.03 E-value=1e-10 Score=126.92 Aligned_cols=106 Identities=20% Similarity=0.370 Sum_probs=79.5
Q ss_pred hcCccccCeeeccCCeeEEEEE-EcCCCEEEEEEcCCc--ChhcHHHHHHHHHHHHhCCCCCccceEEEEEEC------C
Q 004275 658 TNNFDAANKIGEGGFGPVYKGT-LSDGAVIAVKQLSSK--SKQGNREFVNEIGMISALQHQNLVKLYGCCIEG------N 728 (764)
Q Consensus 658 ~~~~~~~~~iG~G~~g~Vy~~~-~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~------~ 728 (764)
.+.|...+.||+|+||.||+|. ..+|+.||||++... .....+.+.+|++++++++|||||++++++... .
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 107 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence 4668889999999999999998 467889999999653 233456789999999999999999999999754 5
Q ss_pred EEEEEEcccCCCcHHHHHhcCCC-------------CCCCHHHHccccC
Q 004275 729 QLLLVYEYLENNSLARALFGNAI-------------TKITYTFSLHLWN 764 (764)
Q Consensus 729 ~~~lv~Ey~~~GsL~~~L~~~~~-------------~~l~~~~~~~i~h 764 (764)
..++|+||+ +++|.+++..... .++.+.|..+|+|
T Consensus 108 ~~~lv~e~~-~~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH 155 (367)
T 2fst_X 108 DVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIH 155 (367)
T ss_dssp CCEEEEECC-CEECC-----CCCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred eEEEEeccc-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeee
Confidence 579999999 6899888865421 3577888888888
No 367
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=99.02 E-value=2.7e-10 Score=126.28 Aligned_cols=102 Identities=15% Similarity=0.210 Sum_probs=85.2
Q ss_pred cCccccCeeeccCCeeEEEEEEcCCCEEEEEEcCCcChhcHHHHHHHHHHHHhC-CCCCccceEEEEEECCEEEEEEccc
Q 004275 659 NNFDAANKIGEGGFGPVYKGTLSDGAVIAVKQLSSKSKQGNREFVNEIGMISAL-QHQNLVKLYGCCIEGNQLLLVYEYL 737 (764)
Q Consensus 659 ~~~~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~Ey~ 737 (764)
..|...++||+|+||+||.....+|+.||||++..... ..+.+|++++.++ +|||||++++++.+.+..++|||||
T Consensus 24 ~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~---~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~ 100 (432)
T 3p23_A 24 ISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF---SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELC 100 (432)
T ss_dssp EEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE---EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred EEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH---HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECC
Confidence 45888899999999997655566889999999965432 2356899999999 7999999999999999999999999
Q ss_pred CCCcHHHHHhcCCC---------------CCCCHHHHccccC
Q 004275 738 ENNSLARALFGNAI---------------TKITYTFSLHLWN 764 (764)
Q Consensus 738 ~~GsL~~~L~~~~~---------------~~l~~~~~~~i~h 764 (764)
+ |+|.+++..... .++.|.|..+|+|
T Consensus 101 ~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH 141 (432)
T 3p23_A 101 A-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVH 141 (432)
T ss_dssp S-EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHTTCCC
T ss_pred C-CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHCcCEe
Confidence 7 699999976532 2578899999998
No 368
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=99.02 E-value=2e-10 Score=124.37 Aligned_cols=106 Identities=18% Similarity=0.271 Sum_probs=82.1
Q ss_pred hcCccccCeeeccCCeeEEEEEEcC------CCEEEEEEcCCcChhc-----------HHHHHHHHHHHHhCCCCCccce
Q 004275 658 TNNFDAANKIGEGGFGPVYKGTLSD------GAVIAVKQLSSKSKQG-----------NREFVNEIGMISALQHQNLVKL 720 (764)
Q Consensus 658 ~~~~~~~~~iG~G~~g~Vy~~~~~~------g~~vAvK~l~~~~~~~-----------~~~f~~E~~~l~~l~H~niv~l 720 (764)
.++|...+.||+|+||.||+|.... ++.||||.+....... ...+..|+..+.+++|+|||++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~ 113 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY 113 (364)
T ss_dssp CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence 4578899999999999999998654 4789999986543211 1234566777888899999999
Q ss_pred EEEEEEC----CEEEEEEcccCCCcHHHHHhcCCC---------------CCCCHHHHccccC
Q 004275 721 YGCCIEG----NQLLLVYEYLENNSLARALFGNAI---------------TKITYTFSLHLWN 764 (764)
Q Consensus 721 ~g~~~~~----~~~~lv~Ey~~~GsL~~~L~~~~~---------------~~l~~~~~~~i~h 764 (764)
++++... ...++||||| +|+|.+++..... .+|.|.|..+|+|
T Consensus 114 ~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiH 175 (364)
T 3op5_A 114 WGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVH 175 (364)
T ss_dssp EEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred EeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeEE
Confidence 9999874 4579999999 9999999976421 2477888888887
No 369
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=99.02 E-value=1.5e-10 Score=120.83 Aligned_cols=106 Identities=16% Similarity=0.302 Sum_probs=81.1
Q ss_pred hcCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcC-hhcHH-HHHHHHHHHHhCCCCCccceEEEEEECCEEEEEE
Q 004275 658 TNNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKS-KQGNR-EFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVY 734 (764)
Q Consensus 658 ~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~-~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 734 (764)
.++|+..+.||+|+||.||+|.. .+|+.||||++.... ..... .+.++...++.++||||+++++++...+..++||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 85 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 85 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence 45688899999999999999995 578899999997542 22223 3445555678899999999999999999999999
Q ss_pred cccCCCcHHHHHhc---CC---------------CCCCCHHHHc-cccC
Q 004275 735 EYLENNSLARALFG---NA---------------ITKITYTFSL-HLWN 764 (764)
Q Consensus 735 Ey~~~GsL~~~L~~---~~---------------~~~l~~~~~~-~i~h 764 (764)
||++ |+|.+++.. .. ..++.|.|.. +|+|
T Consensus 86 e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H 133 (290)
T 3fme_A 86 ELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIH 133 (290)
T ss_dssp ECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCC
T ss_pred ehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeec
Confidence 9998 588888753 11 0246777776 8877
No 370
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=99.02 E-value=6.4e-11 Score=125.49 Aligned_cols=106 Identities=19% Similarity=0.398 Sum_probs=88.4
Q ss_pred hhcCccccCeeeccCCeeEEEEEEcCCCEEEEEEcCCcC--hhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEE
Q 004275 657 ATNNFDAANKIGEGGFGPVYKGTLSDGAVIAVKQLSSKS--KQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVY 734 (764)
Q Consensus 657 ~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 734 (764)
..++|...+.||+|+||.||+|...+ .||||.+.... ....+.|.+|++++.+++|+||+++++++...+..++||
T Consensus 31 ~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~ 108 (319)
T 2y4i_B 31 PFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIIT 108 (319)
T ss_dssp CCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEEC
T ss_pred CHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEe
Confidence 35678889999999999999998743 49999996532 223456889999999999999999999999999999999
Q ss_pred cccCCCcHHHHHhcCCC---------------CCCCHHHHccccC
Q 004275 735 EYLENNSLARALFGNAI---------------TKITYTFSLHLWN 764 (764)
Q Consensus 735 Ey~~~GsL~~~L~~~~~---------------~~l~~~~~~~i~h 764 (764)
||+++|+|.+++..... .++.+.|..+|+|
T Consensus 109 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H 153 (319)
T 2y4i_B 109 SLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILH 153 (319)
T ss_dssp BCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred ecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 99999999999976431 2477888888887
No 371
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=99.02 E-value=4.1e-10 Score=120.26 Aligned_cols=103 Identities=29% Similarity=0.447 Sum_probs=79.8
Q ss_pred hcCccccCeeeccCCeeEEEEEEcCCCEEEEEEcCCcChhcHHHHHHHHHHH--HhCCCCCccceEEEEEE-----CCEE
Q 004275 658 TNNFDAANKIGEGGFGPVYKGTLSDGAVIAVKQLSSKSKQGNREFVNEIGMI--SALQHQNLVKLYGCCIE-----GNQL 730 (764)
Q Consensus 658 ~~~~~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l--~~l~H~niv~l~g~~~~-----~~~~ 730 (764)
.++|...+.||+|+||.||+|+. +++.||||++... ....+..|.++. ..++|+||+++++++.. ....
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 87 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFA---NRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEY 87 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeecc---chhhHHHHHHHHHHHhccCcchhhheecccccccCCCceE
Confidence 45688899999999999999986 6889999999643 234455555554 45899999999987654 2356
Q ss_pred EEEEcccCCCcHHHHHhcCCC-------------CCCCHHHHc---------cccC
Q 004275 731 LLVYEYLENNSLARALFGNAI-------------TKITYTFSL---------HLWN 764 (764)
Q Consensus 731 ~lv~Ey~~~GsL~~~L~~~~~-------------~~l~~~~~~---------~i~h 764 (764)
++||||+++|+|.+++..... .+|.|.|.. +|+|
T Consensus 88 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH 143 (336)
T 3g2f_A 88 LLVMEYYPNGSLXKYLSLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISH 143 (336)
T ss_dssp EEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEEC
T ss_pred EEEEecCCCCcHHHHHhhcccchhHHHHHHHHHHHHHHHHHhhhccccccccceee
Confidence 899999999999999976532 346777777 7777
No 372
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=99.01 E-value=6.9e-10 Score=117.01 Aligned_cols=107 Identities=23% Similarity=0.423 Sum_probs=83.2
Q ss_pred hhcCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcC-----hhcHHHHHHHHHHHHhCC---CCCccceEEEEEEC
Q 004275 657 ATNNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKS-----KQGNREFVNEIGMISALQ---HQNLVKLYGCCIEG 727 (764)
Q Consensus 657 ~~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~-----~~~~~~f~~E~~~l~~l~---H~niv~l~g~~~~~ 727 (764)
..++|+..+.||+|+||+||+|+. .+++.||||++.... ......+.+|++++.+++ |||||+++++|...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 356799999999999999999994 678999999986322 112356778888777664 99999999999876
Q ss_pred C-----EEEEEEcccCCCcHHHHHhcCCC----------------CCCCHHHHccccC
Q 004275 728 N-----QLLLVYEYLENNSLARALFGNAI----------------TKITYTFSLHLWN 764 (764)
Q Consensus 728 ~-----~~~lv~Ey~~~GsL~~~L~~~~~----------------~~l~~~~~~~i~h 764 (764)
. ..++||||++ |+|.+++..... .++.|.|..+|+|
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH 143 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVH 143 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 5 4799999998 599999986543 2467778888877
No 373
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.00 E-value=4e-10 Score=128.34 Aligned_cols=102 Identities=9% Similarity=0.069 Sum_probs=76.4
Q ss_pred cccCeeeccCCeeEEEEEEcCCCEEEEEEcCCcCh--------hcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEE
Q 004275 662 DAANKIGEGGFGPVYKGTLSDGAVIAVKQLSSKSK--------QGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLV 733 (764)
Q Consensus 662 ~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~--------~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv 733 (764)
...+.||+|+||.||+|.. .+..+|+|+...... ...+.|.+|++++++++|||||++..++...+..++|
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 3467899999999999954 577899998754221 1134589999999999999999888888888888999
Q ss_pred EcccCCCcHHHHHhcCC------CCCCCHHHHccccC
Q 004275 734 YEYLENNSLARALFGNA------ITKITYTFSLHLWN 764 (764)
Q Consensus 734 ~Ey~~~GsL~~~L~~~~------~~~l~~~~~~~i~h 764 (764)
||||++|+|.+++.... ..++.|.|+.+|+|
T Consensus 418 mE~~~ggsL~~~l~~~~~i~~qi~~aL~~LH~~gIiH 454 (540)
T 3en9_A 418 MSYINGKLAKDVIEDNLDIAYKIGEIVGKLHKNDVIH 454 (540)
T ss_dssp EECCCSEEHHHHSTTCTHHHHHHHHHHHHHHHTTEEC
T ss_pred EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCcCcc
Confidence 99999999999987621 14689999999998
No 374
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=99.00 E-value=1.4e-10 Score=124.53 Aligned_cols=105 Identities=20% Similarity=0.271 Sum_probs=79.6
Q ss_pred cCccccCeeeccCCeeEEEEEEc----CCCEEEEEEcCCcChh-----------cHHHHHHHHHHHHhCCCCCccceEEE
Q 004275 659 NNFDAANKIGEGGFGPVYKGTLS----DGAVIAVKQLSSKSKQ-----------GNREFVNEIGMISALQHQNLVKLYGC 723 (764)
Q Consensus 659 ~~~~~~~~iG~G~~g~Vy~~~~~----~g~~vAvK~l~~~~~~-----------~~~~f~~E~~~l~~l~H~niv~l~g~ 723 (764)
++|...+.||+|+||.||+|... ++..||||+....... ..+.+.+|+..+..++|+||++++++
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~ 116 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS 116 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence 45888899999999999999964 5788999998654321 12357789999999999999999999
Q ss_pred EEE----CCEEEEEEcccCCCcHHHHHhcCC--------------CCCCCHHHHccccC
Q 004275 724 CIE----GNQLLLVYEYLENNSLARALFGNA--------------ITKITYTFSLHLWN 764 (764)
Q Consensus 724 ~~~----~~~~~lv~Ey~~~GsL~~~L~~~~--------------~~~l~~~~~~~i~h 764 (764)
+.. ....++||||+ +|+|.+++.... ..++.|.|..+|+|
T Consensus 117 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH 174 (345)
T 2v62_A 117 GLTEFKGRSYRFMVMERL-GIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHENEYVH 174 (345)
T ss_dssp EEEESSSCEEEEEEEECE-EEEHHHHCBGGGBCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred cccccCCCcEEEEEEecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeC
Confidence 998 67899999999 999999987542 13577888888887
No 375
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=98.99 E-value=3e-10 Score=124.92 Aligned_cols=101 Identities=24% Similarity=0.424 Sum_probs=76.2
Q ss_pred ccc-cCeeeccCCeeEEEEEEc---CCCEEEEEEcCCcChhcHHHHHHHHHHHHhCCCCCccceEEEEEE--CCEEEEEE
Q 004275 661 FDA-ANKIGEGGFGPVYKGTLS---DGAVIAVKQLSSKSKQGNREFVNEIGMISALQHQNLVKLYGCCIE--GNQLLLVY 734 (764)
Q Consensus 661 ~~~-~~~iG~G~~g~Vy~~~~~---~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~--~~~~~lv~ 734 (764)
|.. .++||+|+||.||+|+.. +++.||||++.... ....+.+|++++++++|||||++++++.. ....++||
T Consensus 22 y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~ 99 (405)
T 3rgf_A 22 FEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLF 99 (405)
T ss_dssp EECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEE
T ss_pred hhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEE
Confidence 443 457999999999999965 57889999997543 23578899999999999999999999976 56899999
Q ss_pred cccCCCcHHHHHhcCC-----------------------CCCCCHHHHccccC
Q 004275 735 EYLENNSLARALFGNA-----------------------ITKITYTFSLHLWN 764 (764)
Q Consensus 735 Ey~~~GsL~~~L~~~~-----------------------~~~l~~~~~~~i~h 764 (764)
||+++ +|.+++.... ..+|.|.|..+|+|
T Consensus 100 e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH 151 (405)
T 3rgf_A 100 DYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLH 151 (405)
T ss_dssp ECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred eCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeC
Confidence 99985 8888775210 13578888999888
No 376
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=98.99 E-value=1.9e-10 Score=124.01 Aligned_cols=106 Identities=18% Similarity=0.344 Sum_probs=86.0
Q ss_pred hcCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcC--hhcHHHHHHHHHHHHhCCCCCccceEEEEEECCE-----
Q 004275 658 TNNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKS--KQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQ----- 729 (764)
Q Consensus 658 ~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~----- 729 (764)
.+.|...+.||+|+||.||+|+. .+|+.||||++.... ....+.+.+|++++.+++|||||++++++...+.
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 102 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 102 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence 35688889999999999999995 578999999996532 2335678999999999999999999999987653
Q ss_pred -EEEEEcccCCCcHHHHHhcCC------------CCCCCHHHHccccC
Q 004275 730 -LLLVYEYLENNSLARALFGNA------------ITKITYTFSLHLWN 764 (764)
Q Consensus 730 -~~lv~Ey~~~GsL~~~L~~~~------------~~~l~~~~~~~i~h 764 (764)
.++||||++ |+|.+++...- ..++.+.|..+|+|
T Consensus 103 ~~~lv~e~~~-~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH 149 (353)
T 3coi_A 103 DFYLVMPFMQ-TDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSAGVVH 149 (353)
T ss_dssp CCEEEEECCS-EEGGGTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred eEEEEecccc-CCHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 499999998 58887764321 13578888888888
No 377
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=98.99 E-value=7.5e-10 Score=118.50 Aligned_cols=90 Identities=18% Similarity=0.412 Sum_probs=75.2
Q ss_pred hcCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcC-hhcHHHHHHHHHH-HHhCCCCCccceEEEEEECCEEEEEE
Q 004275 658 TNNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKS-KQGNREFVNEIGM-ISALQHQNLVKLYGCCIEGNQLLLVY 734 (764)
Q Consensus 658 ~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~f~~E~~~-l~~l~H~niv~l~g~~~~~~~~~lv~ 734 (764)
.++|...+.||+|+||.||+|.. .+|+.||||++.... .....++..|..+ ++.++|||||++++++...+..++||
T Consensus 50 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 129 (340)
T 3an0_A 50 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 129 (340)
T ss_dssp SSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEEE
T ss_pred hhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEEH
Confidence 45688889999999999999995 678999999997542 2334566667666 67789999999999999999999999
Q ss_pred cccCCCcHHHHHhc
Q 004275 735 EYLENNSLARALFG 748 (764)
Q Consensus 735 Ey~~~GsL~~~L~~ 748 (764)
||+++ +|.+++..
T Consensus 130 e~~~~-~L~~~l~~ 142 (340)
T 3an0_A 130 ELMDT-SLDKFYKQ 142 (340)
T ss_dssp CCCSE-EHHHHHHH
T ss_pred HHhhC-cHHHHHHH
Confidence 99985 99998863
No 378
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=98.96 E-value=1.1e-09 Score=116.41 Aligned_cols=89 Identities=18% Similarity=0.421 Sum_probs=73.3
Q ss_pred hcCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcC-hhcHHHHHHHHH-HHHhCCCCCccceEEEEEECCEEEEEE
Q 004275 658 TNNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKS-KQGNREFVNEIG-MISALQHQNLVKLYGCCIEGNQLLLVY 734 (764)
Q Consensus 658 ~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~f~~E~~-~l~~l~H~niv~l~g~~~~~~~~~lv~ 734 (764)
.++|...+.||+|+||.||+|.. .+|+.||||++.... .....++.+|+. +++.++||||+++++++...+..++||
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~ 100 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM 100 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence 35688889999999999999996 478899999997543 333456677776 677789999999999999999999999
Q ss_pred cccCCCcHHHHHh
Q 004275 735 EYLENNSLARALF 747 (764)
Q Consensus 735 Ey~~~GsL~~~L~ 747 (764)
||+++ +|.+++.
T Consensus 101 e~~~~-~l~~~~~ 112 (327)
T 3aln_A 101 ELMST-SFDKFYK 112 (327)
T ss_dssp CCCSE-EHHHHHH
T ss_pred eecCC-ChHHHHH
Confidence 99995 7887775
No 379
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=98.95 E-value=5.2e-10 Score=120.70 Aligned_cols=110 Identities=22% Similarity=0.349 Sum_probs=73.9
Q ss_pred HHHHhhcCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcChhcHHHHHHHHHHHHhCCCCCccceEEEEEECCE--
Q 004275 653 QIKAATNNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKSKQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQ-- 729 (764)
Q Consensus 653 ~~~~~~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~-- 729 (764)
......++|...+.||+|+||.||+|+. .+|+.||||++..... ....+.+|++.+..++|||||++++++...+.
T Consensus 17 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~ 95 (360)
T 3e3p_A 17 RSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPR-FRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERD 95 (360)
T ss_dssp HHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTT-CCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSC
T ss_pred hchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCcc-ccHHHHHHHHHHHhcCCCCcccHHHhhhcccccc
Confidence 3455678899999999999999999996 5789999999854322 23457788889999999999999999976443
Q ss_pred -----EEEEEcccCCCcHHHHHhc----CCC--------------CCCCHHH--HccccC
Q 004275 730 -----LLLVYEYLENNSLARALFG----NAI--------------TKITYTF--SLHLWN 764 (764)
Q Consensus 730 -----~~lv~Ey~~~GsL~~~L~~----~~~--------------~~l~~~~--~~~i~h 764 (764)
.++||||+++ +|.+.+.. ... .++.|.| ..+|+|
T Consensus 96 ~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH 154 (360)
T 3e3p_A 96 RRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCH 154 (360)
T ss_dssp TTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBC
T ss_pred ccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeec
Confidence 7899999997 45544432 111 2356777 888887
No 380
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=98.95 E-value=1e-09 Score=116.64 Aligned_cols=107 Identities=23% Similarity=0.473 Sum_probs=84.1
Q ss_pred hhcCccccCeeeccCCeeEEEEEE--cCCCEEEEEEcCCcC--hhcHHHHHHHHHHHHhC---CCCCccceEEEEE----
Q 004275 657 ATNNFDAANKIGEGGFGPVYKGTL--SDGAVIAVKQLSSKS--KQGNREFVNEIGMISAL---QHQNLVKLYGCCI---- 725 (764)
Q Consensus 657 ~~~~~~~~~~iG~G~~g~Vy~~~~--~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l---~H~niv~l~g~~~---- 725 (764)
+.+.|...+.||+|+||.||+|+. .+|+.||||++.... ......+.+|++++.++ +||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 456799999999999999999996 467899999986432 22234577788777766 8999999999997
Q ss_pred -ECCEEEEEEcccCCCcHHHHHhcCCC----------------CCCCHHHHccccC
Q 004275 726 -EGNQLLLVYEYLENNSLARALFGNAI----------------TKITYTFSLHLWN 764 (764)
Q Consensus 726 -~~~~~~lv~Ey~~~GsL~~~L~~~~~----------------~~l~~~~~~~i~h 764 (764)
.....++||||++ |+|.+++..... .++.+.|..+|+|
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H 143 (326)
T 1blx_A 89 DRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVH 143 (326)
T ss_dssp SSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred CCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCcee
Confidence 3456899999999 699999976432 2467778888887
No 381
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=98.95 E-value=3.6e-10 Score=121.77 Aligned_cols=100 Identities=14% Similarity=0.138 Sum_probs=81.8
Q ss_pred cCccccCeeeccCCeeEEEEEEc---------CCCEEEEEEcCCcChhcHHHHHHHHHHHHhCCCCCccc----------
Q 004275 659 NNFDAANKIGEGGFGPVYKGTLS---------DGAVIAVKQLSSKSKQGNREFVNEIGMISALQHQNLVK---------- 719 (764)
Q Consensus 659 ~~~~~~~~iG~G~~g~Vy~~~~~---------~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~---------- 719 (764)
++|...+.||+|+||.||+|+.. +++.||||.+... +.+.+|++++.+++|||||+
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 116 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPL 116 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTT
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCc
Confidence 56888999999999999999964 3789999998653 36889999999999999998
Q ss_pred -----eEEEEEE-CCEEEEEEcccCCCcHHHHHhcCCC----------------CCCCHHHHccccC
Q 004275 720 -----LYGCCIE-GNQLLLVYEYLENNSLARALFGNAI----------------TKITYTFSLHLWN 764 (764)
Q Consensus 720 -----l~g~~~~-~~~~~lv~Ey~~~GsL~~~L~~~~~----------------~~l~~~~~~~i~h 764 (764)
+++++.. .+..++||||+ +|+|.+++..... .++.+.|..+|+|
T Consensus 117 ~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH 182 (352)
T 2jii_A 117 LAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVH 182 (352)
T ss_dssp CSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCBC
T ss_pred cCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCCccC
Confidence 6888887 67889999999 9999999986411 2467778888877
No 382
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=98.94 E-value=3.3e-10 Score=125.24 Aligned_cols=100 Identities=24% Similarity=0.457 Sum_probs=77.9
Q ss_pred CccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcChhcHHHHHHHHHHHHhCCCCCccceEEEEEEC----C--EEEE
Q 004275 660 NFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKSKQGNREFVNEIGMISALQHQNLVKLYGCCIEG----N--QLLL 732 (764)
Q Consensus 660 ~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~----~--~~~l 732 (764)
.|...+.||+|+||.||+|+. .+|+.||||++..... .+.+|++++++++|+|||++++++... + ..++
T Consensus 55 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~l 130 (420)
T 1j1b_A 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL 130 (420)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEE
T ss_pred eEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch----hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEe
Confidence 477889999999999999996 4689999999864322 234799999999999999999998652 2 3579
Q ss_pred EEcccCCCcHHHHHhc----CC--------------CCCCCHHHHccccC
Q 004275 733 VYEYLENNSLARALFG----NA--------------ITKITYTFSLHLWN 764 (764)
Q Consensus 733 v~Ey~~~GsL~~~L~~----~~--------------~~~l~~~~~~~i~h 764 (764)
||||+++ ++.+.+.. .. ..+|.|.|..+|+|
T Consensus 131 v~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH 179 (420)
T 1j1b_A 131 VLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICH 179 (420)
T ss_dssp EEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEEC
T ss_pred ehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 9999996 56666542 11 13578888888888
No 383
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=98.93 E-value=2.1e-09 Score=114.97 Aligned_cols=102 Identities=19% Similarity=0.217 Sum_probs=77.5
Q ss_pred hcCcccc-CeeeccCCeeEEEEEEc-CCCEEEEEEcCCcChhcHHHHHHHH-HHHHhCCCCCccceEEEEEE----CCEE
Q 004275 658 TNNFDAA-NKIGEGGFGPVYKGTLS-DGAVIAVKQLSSKSKQGNREFVNEI-GMISALQHQNLVKLYGCCIE----GNQL 730 (764)
Q Consensus 658 ~~~~~~~-~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~-~~l~~l~H~niv~l~g~~~~----~~~~ 730 (764)
.++|... ++||+|+||.||+|... +|+.||||++.... ...+|+ ..+..++|+||+++++++.. ....
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 101 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP-----KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCL 101 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH-----HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH-----HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceE
Confidence 4567774 57999999999999964 78999999996531 222333 34566789999999999976 4458
Q ss_pred EEEEcccCCCcHHHHHhcCCCC----------------CCCHHHHccccC
Q 004275 731 LLVYEYLENNSLARALFGNAIT----------------KITYTFSLHLWN 764 (764)
Q Consensus 731 ~lv~Ey~~~GsL~~~L~~~~~~----------------~l~~~~~~~i~h 764 (764)
++|||||++|+|.+++...... ++.|.|..+|+|
T Consensus 102 ~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH 151 (336)
T 3fhr_A 102 LIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAH 151 (336)
T ss_dssp EEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred EEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 9999999999999999865422 466777777776
No 384
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=98.93 E-value=1.3e-09 Score=113.93 Aligned_cols=104 Identities=27% Similarity=0.378 Sum_probs=84.6
Q ss_pred hcCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcChhcHHHHHHHHHHHHhCCCCCccceEEEE-EECCEEEEEEc
Q 004275 658 TNNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKSKQGNREFVNEIGMISALQHQNLVKLYGCC-IEGNQLLLVYE 735 (764)
Q Consensus 658 ~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~-~~~~~~~lv~E 735 (764)
.++|...+.||+|+||.||+|+. .+|+.||||++..... .+++.+|++++.+++|++++..++++ ...+..++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 85 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME 85 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEE
Confidence 46789999999999999999995 6789999999865432 24689999999999999877777766 55678899999
Q ss_pred ccCCCcHHHHHhcCCC---------------CCCCHHHHccccC
Q 004275 736 YLENNSLARALFGNAI---------------TKITYTFSLHLWN 764 (764)
Q Consensus 736 y~~~GsL~~~L~~~~~---------------~~l~~~~~~~i~h 764 (764)
|+ +|+|.+++..... .++.+.|..+|+|
T Consensus 86 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH 128 (296)
T 3uzp_A 86 LL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIH 128 (296)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred ec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeee
Confidence 99 8999999974321 2477888888887
No 385
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=98.91 E-value=3.7e-09 Score=117.06 Aligned_cols=105 Identities=19% Similarity=0.284 Sum_probs=85.6
Q ss_pred hcCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcChhcHHHHHHHHHHHHhC------CCCCccceEEEEEECCEE
Q 004275 658 TNNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKSKQGNREFVNEIGMISAL------QHQNLVKLYGCCIEGNQL 730 (764)
Q Consensus 658 ~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l------~H~niv~l~g~~~~~~~~ 730 (764)
...|+..+.||+|+||.||+|.. .+++.||||++... ....+++.+|++++..+ .|+||+++++++...+..
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~ 174 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHI 174 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEE
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeE
Confidence 34588899999999999999985 46889999999754 22345788888888876 577999999999999999
Q ss_pred EEEEcccCCCcHHHHHhcCCC----------------CCCCHHHHccccC
Q 004275 731 LLVYEYLENNSLARALFGNAI----------------TKITYTFSLHLWN 764 (764)
Q Consensus 731 ~lv~Ey~~~GsL~~~L~~~~~----------------~~l~~~~~~~i~h 764 (764)
++||||++ |+|.+++..... .+|.|.|..+|+|
T Consensus 175 ~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH 223 (429)
T 3kvw_A 175 CMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIH 223 (429)
T ss_dssp EEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHTEEC
T ss_pred EEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 99999997 699999976542 2466777777777
No 386
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=98.89 E-value=1.5e-09 Score=113.48 Aligned_cols=105 Identities=27% Similarity=0.375 Sum_probs=81.3
Q ss_pred hhcCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcChhcHHHHHHHHHHHHhCCCCCccceEEEE-EECCEEEEEE
Q 004275 657 ATNNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKSKQGNREFVNEIGMISALQHQNLVKLYGCC-IEGNQLLLVY 734 (764)
Q Consensus 657 ~~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~-~~~~~~~lv~ 734 (764)
..+.|...+.||+|+||.||+|+. .+++.||||.+..... .+++.+|++++.+++|++++..+++| ...+..++||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 84 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM 84 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc--chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEE
Confidence 456799999999999999999994 6788999998754322 23588999999999998888777766 5667889999
Q ss_pred cccCCCcHHHHHhcCCC---------------CCCCHHHHccccC
Q 004275 735 EYLENNSLARALFGNAI---------------TKITYTFSLHLWN 764 (764)
Q Consensus 735 Ey~~~GsL~~~L~~~~~---------------~~l~~~~~~~i~h 764 (764)
||+ +|+|.+++..... .++.+.|..+|+|
T Consensus 85 e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH 128 (296)
T 4hgt_A 85 ELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIH 128 (296)
T ss_dssp ECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred Ecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 999 9999999974321 3477888888887
No 387
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=98.89 E-value=5.9e-10 Score=122.05 Aligned_cols=102 Identities=21% Similarity=0.402 Sum_probs=77.8
Q ss_pred cCccccCeeeccCCeeEEEEEEcCCCEEEEEEcCCcChhcHHHHHHHHHHHHhCCCCCccceEEEEEECCE------EEE
Q 004275 659 NNFDAANKIGEGGFGPVYKGTLSDGAVIAVKQLSSKSKQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQ------LLL 732 (764)
Q Consensus 659 ~~~~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~------~~l 732 (764)
..|...+.||+|+||.||+|+...+..||+|++..... ...+|+++++.++|||||++++++...+. .++
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l 115 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNL 115 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEE
Confidence 34788899999999999999987667799998854322 12379999999999999999999976443 789
Q ss_pred EEcccCCCcHHHHHh----cCC-------------CCCCCHHHHccccC
Q 004275 733 VYEYLENNSLARALF----GNA-------------ITKITYTFSLHLWN 764 (764)
Q Consensus 733 v~Ey~~~GsL~~~L~----~~~-------------~~~l~~~~~~~i~h 764 (764)
||||++++.+....+ ... ..++.|.|..+|+|
T Consensus 116 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH 164 (394)
T 4e7w_A 116 VLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICH 164 (394)
T ss_dssp EEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred EeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccC
Confidence 999999764433221 111 13578889999988
No 388
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=98.88 E-value=1.8e-09 Score=117.94 Aligned_cols=105 Identities=17% Similarity=0.331 Sum_probs=83.4
Q ss_pred hcCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcChhcHHHHHHHHHHHHhCC--------CCCccceEEEEE---
Q 004275 658 TNNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKSKQGNREFVNEIGMISALQ--------HQNLVKLYGCCI--- 725 (764)
Q Consensus 658 ~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~--------H~niv~l~g~~~--- 725 (764)
.+.|...+.||+|+||.||+|+. .+++.||||++... ....+.+.+|++++.+++ |+|||++++++.
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~ 114 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG 114 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence 35688999999999999999984 57889999999754 334567899999999886 788999999987
Q ss_pred -ECCEEEEEEcccCCCcHHHHHhcCCC----------------CCCCHHHHc-cccC
Q 004275 726 -EGNQLLLVYEYLENNSLARALFGNAI----------------TKITYTFSL-HLWN 764 (764)
Q Consensus 726 -~~~~~~lv~Ey~~~GsL~~~L~~~~~----------------~~l~~~~~~-~i~h 764 (764)
.....++||||+ +|++.+++..... .+|.|.|.. +|+|
T Consensus 115 ~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~givH 170 (397)
T 1wak_A 115 VNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIH 170 (397)
T ss_dssp TTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEEC
T ss_pred CCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCCEec
Confidence 345789999999 5677777754421 246778887 8887
No 389
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=98.88 E-value=9.2e-10 Score=114.62 Aligned_cols=105 Identities=13% Similarity=0.082 Sum_probs=80.0
Q ss_pred HHhhcCccccCeeeccCCeeEEEEEEcCCCEEEEEEcCCcCh------------------hcHHHHHHHHHHHHhCCCCC
Q 004275 655 KAATNNFDAANKIGEGGFGPVYKGTLSDGAVIAVKQLSSKSK------------------QGNREFVNEIGMISALQHQN 716 (764)
Q Consensus 655 ~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~------------------~~~~~f~~E~~~l~~l~H~n 716 (764)
......|...+.||+|+||.||+|...+|+.||||.++.... .....+.+|++++++++ |
T Consensus 86 ~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~ 163 (282)
T 1zar_A 86 VRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G 163 (282)
T ss_dssp HHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T
T ss_pred HhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C
Confidence 334455667799999999999999987799999999964321 12456899999999999 4
Q ss_pred ccceEEEEEECCEEEEEEcccCCCcHHHHHhcCC--------CCCCCHHHHccccC
Q 004275 717 LVKLYGCCIEGNQLLLVYEYLENNSLARALFGNA--------ITKITYTFSLHLWN 764 (764)
Q Consensus 717 iv~l~g~~~~~~~~~lv~Ey~~~GsL~~~L~~~~--------~~~l~~~~~~~i~h 764 (764)
+++.+++.. +..++|||||++|+|.+ +.... ..++.+.|+.+|+|
T Consensus 164 -~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~~~~~~i~~qi~~~l~~lH~~giiH 216 (282)
T 1zar_A 164 -LAVPKVYAW-EGNAVLMELIDAKELYR-VRVENPDEVLDMILEEVAKFYHRGIVH 216 (282)
T ss_dssp -SSSCCEEEE-ETTEEEEECCCCEEGGG-CCCSCHHHHHHHHHHHHHHHHHTTEEC
T ss_pred -CCcCeEEec-cceEEEEEecCCCcHHH-cchhhHHHHHHHHHHHHHHHHHCCCEe
Confidence 666665543 55699999999999988 43221 14688999999998
No 390
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=98.88 E-value=4.4e-10 Score=119.34 Aligned_cols=108 Identities=17% Similarity=0.321 Sum_probs=88.1
Q ss_pred hhcCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcChh------cHHHHHHHHHHHHhCC--CCCccceEEEEEEC
Q 004275 657 ATNNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKSKQ------GNREFVNEIGMISALQ--HQNLVKLYGCCIEG 727 (764)
Q Consensus 657 ~~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~------~~~~f~~E~~~l~~l~--H~niv~l~g~~~~~ 727 (764)
..+.|...+.||+|+||.||+|+. .+++.||||.+...... ..+.+.+|++++.+++ |+||+++++++...
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~ 120 (320)
T 3a99_A 41 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP 120 (320)
T ss_dssp CTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECS
T ss_pred ccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecC
Confidence 456688999999999999999984 57889999999653211 2245778999999996 59999999999999
Q ss_pred CEEEEEEcccCC-CcHHHHHhcCCC--------------CCCCHHHHccccC
Q 004275 728 NQLLLVYEYLEN-NSLARALFGNAI--------------TKITYTFSLHLWN 764 (764)
Q Consensus 728 ~~~~lv~Ey~~~-GsL~~~L~~~~~--------------~~l~~~~~~~i~h 764 (764)
+..++||||+.+ |+|.+++..... .+|.+.|..+|+|
T Consensus 121 ~~~~lv~e~~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH 172 (320)
T 3a99_A 121 DSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLH 172 (320)
T ss_dssp SEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred CcEEEEEEcCCCCccHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcEe
Confidence 999999999986 899999875321 3577888888887
No 391
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=98.87 E-value=4e-09 Score=112.32 Aligned_cols=105 Identities=20% Similarity=0.306 Sum_probs=86.9
Q ss_pred hcCccccCeeeccCCeeEEEEEE--cCCCEEEEEEcCCcChhcHHHHHHHHHHHHhCCCCC------ccceEEEEEECCE
Q 004275 658 TNNFDAANKIGEGGFGPVYKGTL--SDGAVIAVKQLSSKSKQGNREFVNEIGMISALQHQN------LVKLYGCCIEGNQ 729 (764)
Q Consensus 658 ~~~~~~~~~iG~G~~g~Vy~~~~--~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~n------iv~l~g~~~~~~~ 729 (764)
.+.|+..+.||+|+||.||+|.. .+++.||||++... ....+.+.+|++++.+++|++ ++++++++...+.
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~ 91 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGH 91 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTE
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCc
Confidence 35688999999999999999985 46789999999754 233567889999998887665 9999999999999
Q ss_pred EEEEEcccCCCcHHHHHhcCCC----------------CCCCHHHHccccC
Q 004275 730 LLLVYEYLENNSLARALFGNAI----------------TKITYTFSLHLWN 764 (764)
Q Consensus 730 ~~lv~Ey~~~GsL~~~L~~~~~----------------~~l~~~~~~~i~h 764 (764)
.++||||+ +|+|.+++..... .++.+.|..+|+|
T Consensus 92 ~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH 141 (339)
T 1z57_A 92 ICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTH 141 (339)
T ss_dssp EEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred EEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCCCcC
Confidence 99999999 8899999976542 2467788888887
No 392
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=98.87 E-value=8.7e-10 Score=119.64 Aligned_cols=104 Identities=10% Similarity=-0.014 Sum_probs=69.9
Q ss_pred cCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcCh---hcHHHHHHHH---HHHHhCCCCCccceE-------EEE
Q 004275 659 NNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKSK---QGNREFVNEI---GMISALQHQNLVKLY-------GCC 724 (764)
Q Consensus 659 ~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~---~~~~~f~~E~---~~l~~l~H~niv~l~-------g~~ 724 (764)
..|...+.||+|+||.||+|+. .+|+.||||++..... ...+.+.+|+ +.+++ +|||||+++ +++
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~~ 140 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDAV 140 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCEEE
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehhe
Confidence 4488889999999999999995 4788999999976432 2345677885 45555 799987754 444
Q ss_pred EEC-----------------CEEEEEEcccCCCcHHHHHhcCC---------------------CCCCCHHHHccccC
Q 004275 725 IEG-----------------NQLLLVYEYLENNSLARALFGNA---------------------ITKITYTFSLHLWN 764 (764)
Q Consensus 725 ~~~-----------------~~~~lv~Ey~~~GsL~~~L~~~~---------------------~~~l~~~~~~~i~h 764 (764)
... ...++|||||+ |+|.+++.... ..++.|.|..+|+|
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~ivH 217 (371)
T 3q60_A 141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKGLVH 217 (371)
T ss_dssp EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTEEE
T ss_pred ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHCCCcc
Confidence 433 33799999999 89999997420 13467777777777
No 393
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=98.84 E-value=5.4e-09 Score=117.19 Aligned_cols=104 Identities=25% Similarity=0.367 Sum_probs=83.5
Q ss_pred hcCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcChhcHHHHHHHHHHHHhCCC-CCccceEEEEEECCEEEEEEc
Q 004275 658 TNNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKSKQGNREFVNEIGMISALQH-QNLVKLYGCCIEGNQLLLVYE 735 (764)
Q Consensus 658 ~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H-~niv~l~g~~~~~~~~~lv~E 735 (764)
.+.|...+.||+|+||.||+|+. .+++.||||++..... .+++.+|++++..++| ++++.+..++...+..++|||
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme 83 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMD 83 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEE
Confidence 35688999999999999999995 6789999998764332 2358899999999987 556666667777888999999
Q ss_pred ccCCCcHHHHHhcCCC---------------CCCCHHHHccccC
Q 004275 736 YLENNSLARALFGNAI---------------TKITYTFSLHLWN 764 (764)
Q Consensus 736 y~~~GsL~~~L~~~~~---------------~~l~~~~~~~i~h 764 (764)
|+ +|+|.+++..... .+|.|.|..+|+|
T Consensus 84 ~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvH 126 (483)
T 3sv0_A 84 LL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLH 126 (483)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred CC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCEee
Confidence 99 9999999974221 3577888888887
No 394
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=98.79 E-value=5.6e-09 Score=113.05 Aligned_cols=104 Identities=16% Similarity=0.257 Sum_probs=85.2
Q ss_pred cCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcChhcHHHHHHHHHHHHhCC-----------CCCccceEEEEEE
Q 004275 659 NNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKSKQGNREFVNEIGMISALQ-----------HQNLVKLYGCCIE 726 (764)
Q Consensus 659 ~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~-----------H~niv~l~g~~~~ 726 (764)
++|...+.||+|+||.||+|+. .+++.||||.+... ....+.+.+|++++.+++ |+||+++++++..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~ 97 (373)
T 1q8y_A 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNH 97 (373)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEE
T ss_pred CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhc
Confidence 4688899999999999999995 67889999999753 233567889999999876 8999999999986
Q ss_pred CC----EEEEEEcccCCCcHHHHHhcCCC----------------CCCCHHHHc-cccC
Q 004275 727 GN----QLLLVYEYLENNSLARALFGNAI----------------TKITYTFSL-HLWN 764 (764)
Q Consensus 727 ~~----~~~lv~Ey~~~GsL~~~L~~~~~----------------~~l~~~~~~-~i~h 764 (764)
.+ ..++||||+ +|+|.+++..... .++.+.|.. +|+|
T Consensus 98 ~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH 155 (373)
T 1q8y_A 98 KGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIH 155 (373)
T ss_dssp EETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEEC
T ss_pred cCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCCEEe
Confidence 54 689999999 8999999976332 246777776 8887
No 395
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.79 E-value=1.4e-09 Score=116.99 Aligned_cols=84 Identities=17% Similarity=0.245 Sum_probs=55.5
Q ss_pred CCccccccccccccccccCCccc---cCCCCCCEEeccCCCCCCC----ccccccCCCCCCEEeccCCcCcCCCChhhhc
Q 004275 275 DMKKMERLILRNCLITGRIPEYI---EDMTDLKILDLSFNQLTGP----VPGILQNLKKIDYIFLTNNSLSGTLPDWILT 347 (764)
Q Consensus 275 ~l~~L~~L~Ls~N~l~~~~p~~~---~~l~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~ 347 (764)
.+++|++|+|++|.+....+..+ ..+++|++|+|+.|.+++. ++..+..+++|+.|++++|.++...-..+..
T Consensus 250 ~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~ 329 (362)
T 2ra8_A 250 RFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQK 329 (362)
T ss_dssp TCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHH
T ss_pred CCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHHHH
Confidence 46788888888888764333222 2467888999988888763 3334456788888888888877443333332
Q ss_pred -CCCeEEeecCc
Q 004275 348 -SEKNLDLSYNN 358 (764)
Q Consensus 348 -~l~~L~Ls~N~ 358 (764)
....+|+++|+
T Consensus 330 alg~~~~~~~~~ 341 (362)
T 2ra8_A 330 SLPMKIDVSDSQ 341 (362)
T ss_dssp HCCSEEECCSBC
T ss_pred HcCCEEEecCCc
Confidence 23567887776
No 396
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=98.79 E-value=1e-08 Score=111.57 Aligned_cols=99 Identities=23% Similarity=0.326 Sum_probs=79.6
Q ss_pred HhhcCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcChhcHHHHHHHHHHHHhCC-CC-----CccceEEEEEECC
Q 004275 656 AATNNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKSKQGNREFVNEIGMISALQ-HQ-----NLVKLYGCCIEGN 728 (764)
Q Consensus 656 ~~~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~-H~-----niv~l~g~~~~~~ 728 (764)
...++|...+.||+|+||.||+|+. .+++.||||++... ....+++.+|++++..++ |+ +||++++++...+
T Consensus 51 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~ 129 (382)
T 2vx3_A 51 KWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRN 129 (382)
T ss_dssp EETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETT
T ss_pred EeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCC
Confidence 3457799999999999999999985 46789999999753 223467888999988875 55 4999999999999
Q ss_pred EEEEEEcccCCCcHHHHHhcCCCCCCCH
Q 004275 729 QLLLVYEYLENNSLARALFGNAITKITY 756 (764)
Q Consensus 729 ~~~lv~Ey~~~GsL~~~L~~~~~~~l~~ 756 (764)
..++||||++ |+|.+++.......+++
T Consensus 130 ~~~lv~e~~~-~~L~~~l~~~~~~~~~~ 156 (382)
T 2vx3_A 130 HLCLVFEMLS-YNLYDLLRNTNFRGVSL 156 (382)
T ss_dssp EEEEEEECCC-CBHHHHHHHTTTSCCCH
T ss_pred ceEEEEecCC-CCHHHHHhhcCcCCCCH
Confidence 9999999997 59999998764333333
No 397
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.78 E-value=2.9e-09 Score=121.98 Aligned_cols=99 Identities=14% Similarity=0.064 Sum_probs=74.8
Q ss_pred eeeccCCeeEEEEE-EcCCCEEEEEEcCCcC----------hhcHHHHHHHHHHHHhC-CCCCccceEEEEEECCEEEEE
Q 004275 666 KIGEGGFGPVYKGT-LSDGAVIAVKQLSSKS----------KQGNREFVNEIGMISAL-QHQNLVKLYGCCIEGNQLLLV 733 (764)
Q Consensus 666 ~iG~G~~g~Vy~~~-~~~g~~vAvK~l~~~~----------~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv 733 (764)
..+.|+.|.++++. +-.|+.+|||.+.... ....++|.+|+++|+++ .|+||+++++++.+.+..|||
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV 320 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV 320 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence 45666666666544 3458899999996431 12346799999999999 699999999999999999999
Q ss_pred EcccCCCcHHHHHhcCCC-----------CCCCHHHHccccC
Q 004275 734 YEYLENNSLARALFGNAI-----------TKITYTFSLHLWN 764 (764)
Q Consensus 734 ~Ey~~~GsL~~~L~~~~~-----------~~l~~~~~~~i~h 764 (764)
|||++||+|.++|..... .+|.|.|+.+|+|
T Consensus 321 MEyv~G~~L~d~i~~~~~l~~~~I~~QIl~AL~ylH~~GIIH 362 (569)
T 4azs_A 321 MEKLPGRLLSDMLAAGEEIDREKILGSLLRSLAALEKQGFWH 362 (569)
T ss_dssp EECCCSEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHTTCEE
T ss_pred EecCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHCCcee
Confidence 999999999999986542 4699999999998
No 398
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=98.77 E-value=7.4e-09 Score=109.38 Aligned_cols=106 Identities=19% Similarity=0.332 Sum_probs=73.3
Q ss_pred hcCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcCh-hcH-HHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEE
Q 004275 658 TNNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKSK-QGN-REFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVY 734 (764)
Q Consensus 658 ~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~-~~~-~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 734 (764)
.++|...+.||+|+||.||+|.. .+|+.||||++..... ... +.+..+..++..++||||+++++++...+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~ 103 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM 103 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence 35588889999999999999996 4789999999965432 222 33445556788889999999999999999999999
Q ss_pred cccCCCcHHHHHhcCC---------------CCCCCHHHHc-cccC
Q 004275 735 EYLENNSLARALFGNA---------------ITKITYTFSL-HLWN 764 (764)
Q Consensus 735 Ey~~~GsL~~~L~~~~---------------~~~l~~~~~~-~i~h 764 (764)
||+ ++.+..+..... ..++.+.|.. +|+|
T Consensus 104 e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H 148 (318)
T 2dyl_A 104 ELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIH 148 (318)
T ss_dssp CCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_pred ecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhCCEEe
Confidence 999 445544443211 1246777774 7887
No 399
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=98.76 E-value=1.8e-07 Score=102.24 Aligned_cols=236 Identities=13% Similarity=0.053 Sum_probs=111.8
Q ss_pred eEEEEEcCCCcccccCCccCCCCCCCCEEEccCCcCCccCchhhhcCCCCcEEecccCcCc-------------------
Q 004275 86 HVTVILLKGFNLAGVIPEEFGNLTFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLS------------------- 146 (764)
Q Consensus 86 ~v~~L~L~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~------------------- 146 (764)
.++.+.+.. ++...-..+|.++++|+.++|..+ ++..-...|..+++|+.+.+..+--.
T Consensus 72 ~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~l~~i~~~aF~~~~~~~~~~~~~ 149 (394)
T 4fs7_A 72 KVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLMLKSIGVEAFKGCDFKEITIPEG 149 (394)
T ss_dssp TEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTTCCEECTTTTTTCCCSEEECCTT
T ss_pred CceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCceeeecceeeecccccccccCcc
Confidence 467777753 354444556777888888888654 44344556777777776665433110
Q ss_pred --ccCCcCcCCCCCCCEEEeeCCcCCCCCCccCCCCCCCcEEEccCccCCCCCcccccCCCCCcEEEccCccCCCcCccc
Q 004275 147 --GSIPLEIGDISTLEELVLEDNQLVGPLPENLGNLKSLRRILLSSNNFTGSIPESYGNLKNLTEFRIDGSNLTGRIPNF 224 (764)
Q Consensus 147 --~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~ 224 (764)
..-...|.++++|+.+.+.++. ...-...|.++.+|+.+++..| ++..-...|.++..|+.+.+..+... +.+.
T Consensus 150 ~~~i~~~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~--i~~~ 225 (394)
T 4fs7_A 150 VTVIGDEAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLYY--LGDF 225 (394)
T ss_dssp CCEECTTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCE--ECTT
T ss_pred ccccchhhhcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCCceE--eehh
Confidence 0112235555666666665432 2222334555666666665544 22222334555555555554433221 1122
Q ss_pred ccCCCCCCEEeeeCCcCCCCCccchhcCCCCCEEEcCCCCCCCCCCCCccCCccccccccccccccccCCccccCCCCCC
Q 004275 225 IGNWTKLDRLDLQGTSLEGPIPSTISQLKNLTELRISDLKGSSSSFPNLQDMKKMERLILRNCLITGRIPEYIEDMTDLK 304 (764)
Q Consensus 225 ~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 304 (764)
.....+|+.+.+... ++......+..+.+|+.+.+..+ ........+..+..++.+....+.+. ...|..+.+|+
T Consensus 226 ~~~~~~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~-~~~i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~ 300 (394)
T 4fs7_A 226 ALSKTGVKNIIIPDS-FTELGKSVFYGCTDLESISIQNN-KLRIGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSLT 300 (394)
T ss_dssp TTTTCCCCEEEECTT-CCEECSSTTTTCSSCCEEEECCT-TCEECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTTCC
T ss_pred hcccCCCceEEECCC-ceecccccccccccceeEEcCCC-cceeeccccccccccceeccCceeec---ccccccccccc
Confidence 223345555555432 22122344556667777766552 22222222444444444444332211 12344445555
Q ss_pred EEeccCCCCCCCccccccCCCCCCEEecc
Q 004275 305 ILDLSFNQLTGPVPGILQNLKKIDYIFLT 333 (764)
Q Consensus 305 ~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~ 333 (764)
.+.+..+ ++..-..+|.++.+|+.+++.
T Consensus 301 ~i~l~~~-i~~I~~~aF~~c~~L~~i~lp 328 (394)
T 4fs7_A 301 EVKLLDS-VKFIGEEAFESCTSLVSIDLP 328 (394)
T ss_dssp EEEECTT-CCEECTTTTTTCTTCCEECCC
T ss_pred ccccccc-cceechhhhcCCCCCCEEEeC
Confidence 5555433 332223344555555555554
No 400
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=98.73 E-value=1.8e-08 Score=108.13 Aligned_cols=105 Identities=16% Similarity=0.255 Sum_probs=84.4
Q ss_pred hcCccccCeeeccCCeeEEEEEEc-CC-CEEEEEEcCCcChhcHHHHHHHHHHHHhCCCCC------ccceEEEEEECCE
Q 004275 658 TNNFDAANKIGEGGFGPVYKGTLS-DG-AVIAVKQLSSKSKQGNREFVNEIGMISALQHQN------LVKLYGCCIEGNQ 729 (764)
Q Consensus 658 ~~~~~~~~~iG~G~~g~Vy~~~~~-~g-~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~n------iv~l~g~~~~~~~ 729 (764)
.++|...+.||+|+||.||+|... ++ +.||||++... ....+.+.+|++++.+++|++ ++++.+++...+.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 96 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGH 96 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTE
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCe
Confidence 356889999999999999999853 44 68999999753 233567889999999988776 9999999999999
Q ss_pred EEEEEcccCCCcHHHHHhcCCC----------------CCCCHHHHccccC
Q 004275 730 LLLVYEYLENNSLARALFGNAI----------------TKITYTFSLHLWN 764 (764)
Q Consensus 730 ~~lv~Ey~~~GsL~~~L~~~~~----------------~~l~~~~~~~i~h 764 (764)
.++||||+ +|++.+++..... .+|.+.|..+|+|
T Consensus 97 ~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~ivH 146 (355)
T 2eu9_A 97 MCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTH 146 (355)
T ss_dssp EEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTTEEC
T ss_pred EEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 99999999 6678788765432 2467777777777
No 401
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.70 E-value=4.1e-09 Score=113.33 Aligned_cols=102 Identities=19% Similarity=0.199 Sum_probs=54.7
Q ss_pred eeEEEEEcCCCcccc-c-------CCccCCCCCCCCEEEccCCcCC---------ccCchhhhcCCCCcEEecccCcCcc
Q 004275 85 CHVTVILLKGFNLAG-V-------IPEEFGNLTFLQEVDLSRNYFN---------GSLPKSFARLQNLTKLLILGNRLSG 147 (764)
Q Consensus 85 ~~v~~L~L~~~~l~g-~-------~p~~l~~L~~L~~L~Ls~N~l~---------~~~p~~~~~l~~L~~L~Ls~n~l~~ 147 (764)
.+|+.|.+......| . +..++.++++|+.|.+..+... +.++..+..+++|+.|+|++|.-.
T Consensus 107 ~~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l- 185 (362)
T 2ra8_A 107 PSLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL- 185 (362)
T ss_dssp GGCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-
T ss_pred hhcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-
Confidence 457777777554432 1 1233456778888877654321 124455566677777777666211
Q ss_pred cCCcCcCCCCCCCEEEeeCCcCCCCCCccCC--CCCCCcEEEcc
Q 004275 148 SIPLEIGDISTLEELVLEDNQLVGPLPENLG--NLKSLRRILLS 189 (764)
Q Consensus 148 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~--~l~~L~~L~Ls 189 (764)
.++. +. +++|+.|+|..+.+.......+. .+++|+.|+|+
T Consensus 186 ~l~~-~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~ 227 (362)
T 2ra8_A 186 SIGK-KP-RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLY 227 (362)
T ss_dssp BCCS-CB-CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEE
T ss_pred eecc-cc-CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEe
Confidence 2222 32 56677777766655432222222 46666666664
No 402
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=98.62 E-value=5.2e-07 Score=98.48 Aligned_cols=198 Identities=13% Similarity=0.059 Sum_probs=77.1
Q ss_pred hhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEeeCCcCCCCCCccCCCCCCCcEEEccCccCCCCCcccccCCCC
Q 004275 127 KSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVLEDNQLVGPLPENLGNLKSLRRILLSSNNFTGSIPESYGNLKN 206 (764)
Q Consensus 127 ~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 206 (764)
.+|.++++|+.+.+..+. ...-...|.++.+|+.+++..| ++..-...|.++..|+.+.+..+... +.+.+....+
T Consensus 156 ~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~--i~~~~~~~~~ 231 (394)
T 4fs7_A 156 EAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLYY--LGDFALSKTG 231 (394)
T ss_dssp TTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCE--ECTTTTTTCC
T ss_pred hhhcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCCceE--eehhhcccCC
Confidence 345555555555554332 2122334445555555555433 22222233444445554444433221 1122222334
Q ss_pred CcEEEccCccCCCcCcccccCCCCCCEEeeeCCcCCCCCccchhcCCCCCEEEcCCCCCCCCCCCCccCCcccccccccc
Q 004275 207 LTEFRIDGSNLTGRIPNFIGNWTKLDRLDLQGTSLEGPIPSTISQLKNLTELRISDLKGSSSSFPNLQDMKKMERLILRN 286 (764)
Q Consensus 207 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~ 286 (764)
|+.+.+... ++..-...+..+..|+.+.+..+... .....|..+..++.+......+ .-..+..+.+|+.+.+.+
T Consensus 232 l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i---~~~~F~~~~~L~~i~l~~ 306 (394)
T 4fs7_A 232 VKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIV---PEKTFYGCSSLTEVKLLD 306 (394)
T ss_dssp CCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEE---CTTTTTTCTTCCEEEECT
T ss_pred CceEEECCC-ceecccccccccccceeEEcCCCcce-eeccccccccccceeccCceee---cccccccccccccccccc
Confidence 444444321 11111223344444444444443221 2223344444444444332111 011133344444444433
Q ss_pred ccccccCCccccCCCCCCEEeccCCCCCCCccccccCCCCCCEEeccCC
Q 004275 287 CLITGRIPEYIEDMTDLKILDLSFNQLTGPVPGILQNLKKIDYIFLTNN 335 (764)
Q Consensus 287 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N 335 (764)
+ ++..-...|.++++|+.+++..+ ++..-..+|.++.+|+.+.+..|
T Consensus 307 ~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~ 353 (394)
T 4fs7_A 307 S-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS 353 (394)
T ss_dssp T-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT
T ss_pred c-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc
Confidence 2 33223334444455555554322 33222334444555555544433
No 403
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=98.59 E-value=1.4e-06 Score=95.06 Aligned_cols=261 Identities=14% Similarity=0.164 Sum_probs=151.2
Q ss_pred EEEEEcCCCcccccCCccCCCCCCCCEEEccCCc---CCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEE
Q 004275 87 VTVILLKGFNLAGVIPEEFGNLTFLQEVDLSRNY---FNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELV 163 (764)
Q Consensus 87 v~~L~L~~~~l~g~~p~~l~~L~~L~~L~Ls~N~---l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 163 (764)
++.+.+.. +++..-..+|.++++|+.+.+..|. ++..-..+|..+.+|+.+.+..+ ++..-...|..+.+|+.+.
T Consensus 66 L~sI~iP~-svt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~~c~~L~~i~ 143 (394)
T 4gt6_A 66 LTSVQIPD-TVTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAFHHCEELDTVT 143 (394)
T ss_dssp CCEEEECT-TCCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTTTTCTTCCEEE
T ss_pred CEEEEECC-CeeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhhhhhccccccc
Confidence 45555543 2443345567888888888887664 44344566777778887777654 3334445677778888887
Q ss_pred eeCCcCCCCCCccCCCCCCCcEEEccCccCCCCCcccccCCCCCcEEEccCccCCCcCcccccCCCCCCEEeeeCCc---
Q 004275 164 LEDNQLVGPLPENLGNLKSLRRILLSSNNFTGSIPESYGNLKNLTEFRIDGSNLTGRIPNFIGNWTKLDRLDLQGTS--- 240 (764)
Q Consensus 164 Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~--- 240 (764)
+..+ +.......|..+.+|+.+.+..+ ++..-...|. ..+|+.+.+..+-.. .-...+..+.+++......+.
T Consensus 144 lp~~-~~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~-~~~l~~i~ip~~~~~-i~~~af~~c~~l~~~~~~~~~~~~ 219 (394)
T 4gt6_A 144 IPEG-VTSVADGMFSYCYSLHTVTLPDS-VTAIEERAFT-GTALTQIHIPAKVTR-IGTNAFSECFALSTITSDSESYPA 219 (394)
T ss_dssp CCTT-CCEECTTTTTTCTTCCEEECCTT-CCEECTTTTT-TCCCSEEEECTTCCE-ECTTTTTTCTTCCEEEECCSSSCB
T ss_pred ccce-eeeecccceecccccccccccce-eeEecccccc-ccceeEEEECCcccc-cccchhhhccccceeccccccccc
Confidence 7543 33233345666777777777544 2211122232 244555555432111 112233333333333222111
Q ss_pred ---------------------------------CCCCCccchhcCCCCCEEEcCCCCCCCCCCCCccCCccccccccccc
Q 004275 241 ---------------------------------LEGPIPSTISQLKNLTELRISDLKGSSSSFPNLQDMKKMERLILRNC 287 (764)
Q Consensus 241 ---------------------------------l~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~N 287 (764)
++..-..+|..+.+|+.+.+.+ .........+.+++.|+.+.+. +
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~v~~i~~~aF~~c~~L~~i~lp~-~~~~I~~~aF~~c~~L~~i~l~-~ 297 (394)
T 4gt6_A 220 IDNVLYEKSANGDYALIRYPSQREDPAFKIPNGVARIETHAFDSCAYLASVKMPD-SVVSIGTGAFMNCPALQDIEFS-S 297 (394)
T ss_dssp SSSCEEEECTTSCEEEEECCTTCCCSEEECCTTEEEECTTTTTTCSSCCEEECCT-TCCEECTTTTTTCTTCCEEECC-T
T ss_pred ccceeecccccccccccccccccccceEEcCCcceEcccceeeecccccEEeccc-ccceecCcccccccccccccCC-C
Confidence 1111234567778888888876 3333333447778888888885 4
Q ss_pred cccccCCccccCCCCCCEEeccCCCCCCCccccccCCCCCCEEeccCCcCcCCCCh-hhh--cCCCeEEeecCc
Q 004275 288 LITGRIPEYIEDMTDLKILDLSFNQLTGPVPGILQNLKKIDYIFLTNNSLSGTLPD-WIL--TSEKNLDLSYNN 358 (764)
Q Consensus 288 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~-~~~--~~l~~L~Ls~N~ 358 (764)
.++......|.++.+|+.++|..+ ++..-..+|.++.+|+.+.+..+ ++ .+.+ .|. ..++.+++.+|.
T Consensus 298 ~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~-~I~~~aF~~C~~L~~i~~~~~~ 368 (394)
T 4gt6_A 298 RITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VT-KIPESAFSNCTALNNIEYSGSR 368 (394)
T ss_dssp TCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CC-BCCGGGGTTCTTCCEEEESSCH
T ss_pred cccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cC-EEhHhHhhCCCCCCEEEECCce
Confidence 555455567888888999988764 55444568888888998888654 54 3443 442 457788887764
No 404
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=98.47 E-value=4.6e-06 Score=90.91 Aligned_cols=259 Identities=12% Similarity=0.138 Sum_probs=173.8
Q ss_pred CccCCCCC-CCCEEEccCCcCCccCchhhhcCCCCcEEecccCc---CcccCCcCcCCCCCCCEEEeeCCcCCCCCCccC
Q 004275 102 PEEFGNLT-FLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNR---LSGSIPLEIGDISTLEELVLEDNQLVGPLPENL 177 (764)
Q Consensus 102 p~~l~~L~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~---l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l 177 (764)
..+|.+.+ .|+.+.+..+ ++.+-..+|.++++|+.+.+..|. ++..-...|..+.+|+.+.+..+ ++..-...|
T Consensus 56 ~~aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF 133 (394)
T 4gt6_A 56 DRVFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAF 133 (394)
T ss_dssp TTTTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTT
T ss_pred HhhccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhh
Confidence 34677774 5999999754 665667889999999999998874 55444567888999998887654 443445568
Q ss_pred CCCCCCcEEEccCccCCCCCcccccCCCCCcEEEccCccCCCcCcccccCCCCCCEEeeeCCcCCCCCccchhcCCCCCE
Q 004275 178 GNLKSLRRILLSSNNFTGSIPESYGNLKNLTEFRIDGSNLTGRIPNFIGNWTKLDRLDLQGTSLEGPIPSTISQLKNLTE 257 (764)
Q Consensus 178 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~ 257 (764)
..+.+|+.+.+..+ +.......|..+.+|+.+.+..+ ++..-...|. ..+|+.+.+..+-.. .....+..+.+++.
T Consensus 134 ~~c~~L~~i~lp~~-~~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~-~~~l~~i~ip~~~~~-i~~~af~~c~~l~~ 209 (394)
T 4gt6_A 134 HHCEELDTVTIPEG-VTSVADGMFSYCYSLHTVTLPDS-VTAIEERAFT-GTALTQIHIPAKVTR-IGTNAFSECFALST 209 (394)
T ss_dssp TTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEECCTT-CCEECTTTTT-TCCCSEEEECTTCCE-ECTTTTTTCTTCCE
T ss_pred hhhcccccccccce-eeeecccceecccccccccccce-eeEecccccc-ccceeEEEECCcccc-cccchhhhccccce
Confidence 88999999999754 33344567888999999998764 3323333444 367999888665322 33345666666666
Q ss_pred EEcCCCCCC---------------------------CCCCC---------CccCCccccccccccccccccCCccccCCC
Q 004275 258 LRISDLKGS---------------------------SSSFP---------NLQDMKKMERLILRNCLITGRIPEYIEDMT 301 (764)
Q Consensus 258 L~L~~n~~~---------------------------~~~~~---------~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 301 (764)
......... ...+| .|..+..|+.+.+.++..+ .....|.+++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~v~~i~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~ 288 (394)
T 4gt6_A 210 ITSDSESYPAIDNVLYEKSANGDYALIRYPSQREDPAFKIPNGVARIETHAFDSCAYLASVKMPDSVVS-IGTGAFMNCP 288 (394)
T ss_dssp EEECCSSSCBSSSCEEEECTTSCEEEEECCTTCCCSEEECCTTEEEECTTTTTTCSSCCEEECCTTCCE-ECTTTTTTCT
T ss_pred ecccccccccccceeecccccccccccccccccccceEEcCCcceEcccceeeecccccEEecccccce-ecCccccccc
Confidence 544321100 00112 2667788998888765443 5566788999
Q ss_pred CCCEEeccCCCCCCCccccccCCCCCCEEeccCCcCcCCCChhhh--cCCCeEEeecCcCCCCCCcc---cccc
Q 004275 302 DLKILDLSFNQLTGPVPGILQNLKKIDYIFLTNNSLSGTLPDWIL--TSEKNLDLSYNNFTESSPAT---CRES 370 (764)
Q Consensus 302 ~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~--~~l~~L~Ls~N~l~~~~p~~---~~~~ 370 (764)
.|+.+.+. +.++......|.++.+|+.+.+..+ ++..-...|. ..++.+.+..+ ++...... |..+
T Consensus 289 ~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L 359 (394)
T 4gt6_A 289 ALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTAL 359 (394)
T ss_dssp TCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTC
T ss_pred ccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCC
Confidence 99999996 4566455578999999999999865 5433333443 46788998654 55443333 5554
No 405
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=98.37 E-value=1.2e-07 Score=97.30 Aligned_cols=100 Identities=14% Similarity=0.142 Sum_probs=71.9
Q ss_pred ccccCeeeccCCeeEEEEEE-cCCCE--EEEEEcCCcChh------------------------cHHHHHHHHHHHHhCC
Q 004275 661 FDAANKIGEGGFGPVYKGTL-SDGAV--IAVKQLSSKSKQ------------------------GNREFVNEIGMISALQ 713 (764)
Q Consensus 661 ~~~~~~iG~G~~g~Vy~~~~-~~g~~--vAvK~l~~~~~~------------------------~~~~f~~E~~~l~~l~ 713 (764)
+...+.||+|+||.||+|.. .+|+. ||||.++..... ....+.+|++.+.+++
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 45678899999999999997 78988 999987542110 1136889999999999
Q ss_pred CCCc--cceEEEEEECCEEEEEEcccCC-C----cHHHHHhc----C-------CCCCCCHHH-HccccC
Q 004275 714 HQNL--VKLYGCCIEGNQLLLVYEYLEN-N----SLARALFG----N-------AITKITYTF-SLHLWN 764 (764)
Q Consensus 714 H~ni--v~l~g~~~~~~~~~lv~Ey~~~-G----sL~~~L~~----~-------~~~~l~~~~-~~~i~h 764 (764)
|+++ .+.+++ +..+|||||+.+ | +|.++... . ...++.+.| +.+|+|
T Consensus 129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~givH 194 (258)
T 1zth_A 129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRELKELDVEGIFNDVVENVKRLYQEAELVH 194 (258)
T ss_dssp HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGGGGGSCHHHHHHHHHHHHHHHHHTSCEEC
T ss_pred hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhccChHHHHHHHHHHHHHHHHHHHHCCEEe
Confidence 8864 333332 356899999942 4 77776543 1 113578888 899988
No 406
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.26 E-value=4.6e-08 Score=99.97 Aligned_cols=89 Identities=22% Similarity=0.334 Sum_probs=43.4
Q ss_pred hhcCCCCcE--EecccCcCc---ccCCcCcCCCCCCCEEEeeCCcCCC--CCCccCCCCCCCcEEEccCccCCCCCcccc
Q 004275 129 FARLQNLTK--LLILGNRLS---GSIPLEIGDISTLEELVLEDNQLVG--PLPENLGNLKSLRRILLSSNNFTGSIPESY 201 (764)
Q Consensus 129 ~~~l~~L~~--L~Ls~n~l~---~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~ 201 (764)
|...+.|+. ++++.|+.. ..++....++++|++|+|++|+|++ .+|..+..+++|+.|+|++|++++. ..+
T Consensus 137 l~~dp~L~~~~l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l 214 (267)
T 3rw6_A 137 LRSDPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--REL 214 (267)
T ss_dssp GGGCHHHHHTTCCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGG
T ss_pred cCCCcchhhcCccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhh
Confidence 444444544 555555332 1111112345666666666666665 3344445566666666666666543 222
Q ss_pred cCCC--CCcEEEccCccCCC
Q 004275 202 GNLK--NLTEFRIDGSNLTG 219 (764)
Q Consensus 202 ~~l~--~L~~L~L~~n~l~~ 219 (764)
..+. +|++|+|++|.+.+
T Consensus 215 ~~l~~l~L~~L~L~~Npl~~ 234 (267)
T 3rw6_A 215 DKIKGLKLEELWLDGNSLCD 234 (267)
T ss_dssp GGGTTSCCSEEECTTSTTGG
T ss_pred hhcccCCcceEEccCCcCcc
Confidence 2222 44444444444443
No 407
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.25 E-value=1.5e-07 Score=91.15 Aligned_cols=94 Identities=22% Similarity=0.229 Sum_probs=54.1
Q ss_pred CCccCCCCCCCCEEEccCC-cCCcc----CchhhhcCCCCcEEecccCcCccc----CCcCcCCCCCCCEEEeeCCcCCC
Q 004275 101 IPEEFGNLTFLQEVDLSRN-YFNGS----LPKSFARLQNLTKLLILGNRLSGS----IPLEIGDISTLEELVLEDNQLVG 171 (764)
Q Consensus 101 ~p~~l~~L~~L~~L~Ls~N-~l~~~----~p~~~~~l~~L~~L~Ls~n~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~ 171 (764)
+...+...+.|++|+|++| .+... +...+...++|++|+|++|.+... +...+...++|++|+|++|.+..
T Consensus 28 l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~ 107 (185)
T 1io0_A 28 LKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISG 107 (185)
T ss_dssp HHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCH
T ss_pred HHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCH
Confidence 3344566777888888887 77532 334455566777777777776532 22333444566666666666653
Q ss_pred C----CCccCCCCCCCcEEEc--cCccCC
Q 004275 172 P----LPENLGNLKSLRRILL--SSNNFT 194 (764)
Q Consensus 172 ~----~p~~l~~l~~L~~L~L--s~N~l~ 194 (764)
. +...+...++|++|+| ++|.++
T Consensus 108 ~g~~~l~~~L~~n~~L~~L~L~~~~N~i~ 136 (185)
T 1io0_A 108 SGILALVEALQSNTSLIELRIDNQSQPLG 136 (185)
T ss_dssp HHHHHHHHGGGGCSSCCEEECCCCSSCCC
T ss_pred HHHHHHHHHHHhCCCceEEEecCCCCCCC
Confidence 2 2333444555666666 555554
No 408
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.24 E-value=7.8e-08 Score=98.24 Aligned_cols=80 Identities=20% Similarity=0.308 Sum_probs=63.8
Q ss_pred hcCCCCcEEecccCcCcc--cCCcCcCCCCCCCEEEeeCCcCCCCCCccCCCCC--CCcEEEccCccCCCCCcc------
Q 004275 130 ARLQNLTKLLILGNRLSG--SIPLEIGDISTLEELVLEDNQLVGPLPENLGNLK--SLRRILLSSNNFTGSIPE------ 199 (764)
Q Consensus 130 ~~l~~L~~L~Ls~n~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~--~L~~L~Ls~N~l~~~~p~------ 199 (764)
.++++|+.|+|++|++++ .+|..+..+++|+.|+|++|++.+. ..+..+. +|+.|+|++|.+.+.+|.
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~ 244 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYIS 244 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHH
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHH
Confidence 568999999999999997 5667778899999999999999865 3344444 999999999999876663
Q ss_pred -cccCCCCCcEEE
Q 004275 200 -SYGNLKNLTEFR 211 (764)
Q Consensus 200 -~~~~l~~L~~L~ 211 (764)
.+..+++|+.||
T Consensus 245 ~il~~~P~L~~LD 257 (267)
T 3rw6_A 245 AIRERFPKLLRLD 257 (267)
T ss_dssp HHHHHCTTCCEES
T ss_pred HHHHHCcccCeEC
Confidence 255666776665
No 409
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.22 E-value=3.2e-05 Score=83.66 Aligned_cols=239 Identities=11% Similarity=0.100 Sum_probs=130.5
Q ss_pred eEEEEEcCCCcccccCCccCCCCCCCCEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEee
Q 004275 86 HVTVILLKGFNLAGVIPEEFGNLTFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVLE 165 (764)
Q Consensus 86 ~v~~L~L~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls 165 (764)
.++.+.+.. +++..-..+|..+.+|+.++|..+ ++..-..+|.++ +|+.+.+..+ +...-...|.. .+|+.+.+.
T Consensus 47 ~i~~v~ip~-~vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~-~~L~~i~lp 121 (379)
T 4h09_A 47 RISEVRVNS-GITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQG-TDLDDFEFP 121 (379)
T ss_dssp GCSEEEECT-TEEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTT-CCCSEEECC
T ss_pred CCEEEEeCC-CccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEeccceecc-CCcccccCC
Confidence 456666653 344444567888888888888654 554445667666 5777766543 33222334443 367777775
Q ss_pred CCcCCCCCCccCCCCCCCcEEEccCccCCCCCcccccCCCCCcEEEccCcc-----------------------------
Q 004275 166 DNQLVGPLPENLGNLKSLRRILLSSNNFTGSIPESYGNLKNLTEFRIDGSN----------------------------- 216 (764)
Q Consensus 166 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~----------------------------- 216 (764)
.+- ...-...|.+ .+|+.+.+..+ ++..-...|..+.+++.+.+..+.
T Consensus 122 ~~~-~~i~~~~F~~-~~l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (379)
T 4h09_A 122 GAT-TEIGNYIFYN-SSVKRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAAKTGTE 198 (379)
T ss_dssp TTC-CEECTTTTTT-CCCCEEEECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTTCCCSE
T ss_pred Ccc-cccccccccc-ceeeeeeccce-eeccccchhcccccccccccccccceeecccceecccccceeccccccccccc
Confidence 432 1111111222 23333333221 111112223333333333322111
Q ss_pred ------CCCcCcccccCCCCCCEEeeeCCcCCCCCccchhcCCCCCEEEcCCCCCCCCCCCCccCCcccccccccccccc
Q 004275 217 ------LTGRIPNFIGNWTKLDRLDLQGTSLEGPIPSTISQLKNLTELRISDLKGSSSSFPNLQDMKKMERLILRNCLIT 290 (764)
Q Consensus 217 ------l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~N~l~ 290 (764)
........+....+|+.+.+..+ +.......+..+.+|+.+.+.. +........+.++.+|+.+.+..+ ++
T Consensus 199 ~~~~~~~~~i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~-~v~~I~~~aF~~~~~l~~i~l~~~-i~ 275 (379)
T 4h09_A 199 FTIPSTVKTVTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPK-NVTSIGSFLLQNCTALKTLNFYAK-VK 275 (379)
T ss_dssp EECCTTCCEECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECT-TCCEECTTTTTTCTTCCEEEECCC-CS
T ss_pred cccccceeEEeecccccccccceeeeccc-eeEEccccccCCccceEEEcCC-CccEeCccccceeehhcccccccc-ce
Confidence 11112234455667777777554 3323445667777888888765 333333344667777777777543 44
Q ss_pred ccCCccccCCCCCCEEeccCCCCCCCccccccCCCCCCEEeccCC
Q 004275 291 GRIPEYIEDMTDLKILDLSFNQLTGPVPGILQNLKKIDYIFLTNN 335 (764)
Q Consensus 291 ~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N 335 (764)
......|.++++|+.+.+.++.++.....+|.++.+|+.+.|..+
T Consensus 276 ~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~ 320 (379)
T 4h09_A 276 TVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA 320 (379)
T ss_dssp EECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT
T ss_pred eccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc
Confidence 344456777888888888877777555567888888888887654
No 410
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=98.19 E-value=4.8e-07 Score=99.44 Aligned_cols=106 Identities=10% Similarity=0.086 Sum_probs=71.9
Q ss_pred hcCccccCeeeccCCeeEEEEE-EcCCCEEEEEEcCCcCh---hcHHHHHHHHHHHHhCCC-CCcc----------ceE-
Q 004275 658 TNNFDAANKIGEGGFGPVYKGT-LSDGAVIAVKQLSSKSK---QGNREFVNEIGMISALQH-QNLV----------KLY- 721 (764)
Q Consensus 658 ~~~~~~~~~iG~G~~g~Vy~~~-~~~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H-~niv----------~l~- 721 (764)
+..|...+.||+|+||.||+|+ ..+|+.||||++..... ...+.|.+|+.++..++| +|.. .+.
T Consensus 77 ~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 156 (413)
T 3dzo_A 77 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 156 (413)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEE
T ss_pred ceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhh
Confidence 4457788999999999999999 56799999999974322 235789999999999987 2211 111
Q ss_pred ----------EEEEE-----CCEEEEEEcccCCCcHHHHHh-----cC----------------CCCCCCHHHHccccC
Q 004275 722 ----------GCCIE-----GNQLLLVYEYLENNSLARALF-----GN----------------AITKITYTFSLHLWN 764 (764)
Q Consensus 722 ----------g~~~~-----~~~~~lv~Ey~~~GsL~~~L~-----~~----------------~~~~l~~~~~~~i~h 764 (764)
.+... ....+++|+++ +|+|.+++. .. ...+|.|.|..+|+|
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiH 234 (413)
T 3dzo_A 157 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVH 234 (413)
T ss_dssp EECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred cccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 11111 12346667654 579998884 11 114588888888888
No 411
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.18 E-value=1.7e-07 Score=90.77 Aligned_cols=117 Identities=19% Similarity=0.216 Sum_probs=73.3
Q ss_pred CchhhhcCCCCcEEecccC-cCccc----CCcCcCCCCCCCEEEeeCCcCCCC----CCccCCCCCCCcEEEccCccCCC
Q 004275 125 LPKSFARLQNLTKLLILGN-RLSGS----IPLEIGDISTLEELVLEDNQLVGP----LPENLGNLKSLRRILLSSNNFTG 195 (764)
Q Consensus 125 ~p~~~~~l~~L~~L~Ls~n-~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~l~~l~~L~~L~Ls~N~l~~ 195 (764)
+...+...+.|++|+|++| .+... +...+...++|++|+|++|.+... +...+...++|++|+|++|.++.
T Consensus 28 l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~ 107 (185)
T 1io0_A 28 LKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISG 107 (185)
T ss_dssp HHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCH
T ss_pred HHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCH
Confidence 4455677888999999988 77632 344556677888888888887532 22334455677788888877764
Q ss_pred C----CcccccCCCCCcEEEc--cCccCCCc----CcccccCCCCCCEEeeeCCcC
Q 004275 196 S----IPESYGNLKNLTEFRI--DGSNLTGR----IPNFIGNWTKLDRLDLQGTSL 241 (764)
Q Consensus 196 ~----~p~~~~~l~~L~~L~L--~~n~l~~~----~p~~~~~l~~L~~L~L~~N~l 241 (764)
. +...+...++|++|+| ++|.+... +...+...++|++|+|++|.+
T Consensus 108 ~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i 163 (185)
T 1io0_A 108 SGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQ 163 (185)
T ss_dssp HHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSH
T ss_pred HHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCC
Confidence 2 3444555666777777 56666532 223334445666666666654
No 412
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=98.15 E-value=1.8e-07 Score=100.52 Aligned_cols=102 Identities=12% Similarity=0.087 Sum_probs=67.6
Q ss_pred ccccCeeeccCCeeEEEEEEcCCCEEEEEEcCCcCh--------------hcHHHH--------HHHHHHHHhCCCCCcc
Q 004275 661 FDAANKIGEGGFGPVYKGTLSDGAVIAVKQLSSKSK--------------QGNREF--------VNEIGMISALQHQNLV 718 (764)
Q Consensus 661 ~~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~--------------~~~~~f--------~~E~~~l~~l~H~niv 718 (764)
|.....||+|+||.||+|..++|+.||||.++.... ...... .+|.+.|.++.+..+.
T Consensus 97 Y~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~ 176 (397)
T 4gyi_A 97 YSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFP 176 (397)
T ss_dssp SEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred EEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 778899999999999999988999999998753210 011112 3466666666554443
Q ss_pred ceEEEEEECCEEEEEEcccCCCcHHHHHhcCC--------CCCCCHHHHccccC
Q 004275 719 KLYGCCIEGNQLLLVYEYLENNSLARALFGNA--------ITKITYTFSLHLWN 764 (764)
Q Consensus 719 ~l~g~~~~~~~~~lv~Ey~~~GsL~~~L~~~~--------~~~l~~~~~~~i~h 764 (764)
....+.... .+|||||++++.|.++..... ..++.+.|+.+|+|
T Consensus 177 vp~p~~~~~--~~LVME~i~G~~L~~l~~~~~~~~l~~qll~~l~~lH~~gIVH 228 (397)
T 4gyi_A 177 VPEPIAQSR--HTIVMSLVDALPMRQVSSVPDPASLYADLIALILRLAKHGLIH 228 (397)
T ss_dssp CCCEEEEET--TEEEEECCSCEEGGGCCCCSCHHHHHHHHHHHHHHHHHTTEEC
T ss_pred CCeeeeccC--ceEEEEecCCccHhhhcccHHHHHHHHHHHHHHHHHHHCCCcC
Confidence 222222222 369999999998865432211 13577889999998
No 413
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=97.58 E-value=0.0013 Score=70.89 Aligned_cols=231 Identities=15% Similarity=0.091 Sum_probs=128.6
Q ss_pred eEEEEEcCCCcccccCCccCCCCCCCCEEEccCCcCCccCchhhhcCCCCcEEecccCcCcc------------cCCcCc
Q 004275 86 HVTVILLKGFNLAGVIPEEFGNLTFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSG------------SIPLEI 153 (764)
Q Consensus 86 ~v~~L~L~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~------------~~p~~~ 153 (764)
.++.+.+..+ +...-...|.. ..|+.+.+..+ ++..-...|..+.+++.+.+..+.... .....+
T Consensus 114 ~L~~i~lp~~-~~~i~~~~F~~-~~l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (379)
T 4h09_A 114 DLDDFEFPGA-TTEIGNYIFYN-SSVKRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESY 190 (379)
T ss_dssp CCSEEECCTT-CCEECTTTTTT-CCCCEEEECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEEC
T ss_pred CcccccCCCc-ccccccccccc-ceeeeeeccce-eeccccchhcccccccccccccccceeecccceecccccceeccc
Confidence 3555555432 22222223333 35666666543 333445567777778777766543221 112223
Q ss_pred CCCCCCCEEEeeCCcCCCCCCccCCCCCCCcEEEccCccCCCCCcccccCCCCCcEEEccCccCCCcCcccccCCCCCCE
Q 004275 154 GDISTLEELVLEDNQLVGPLPENLGNLKSLRRILLSSNNFTGSIPESYGNLKNLTEFRIDGSNLTGRIPNFIGNWTKLDR 233 (764)
Q Consensus 154 ~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~ 233 (764)
.....+..+.+..+. .......+....+|+.+.+..+ +.......|.++.+|+.+.+..+ ++..-...|.++.+|+.
T Consensus 191 ~~~~~~~~~~~~~~~-~~i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~ 267 (379)
T 4h09_A 191 PAAKTGTEFTIPSTV-KTVTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKT 267 (379)
T ss_dssp CTTCCCSEEECCTTC-CEECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCE
T ss_pred cccccccccccccce-eEEeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcc
Confidence 344455555543322 2223344556667777776544 33233455667777777777654 44333456667777777
Q ss_pred EeeeCCcCCCCCccchhcCCCCCEEEcCCCCCCCCCCCCccCCccccccccccccccccCCccccCCCCCCEEeccCCCC
Q 004275 234 LDLQGTSLEGPIPSTISQLKNLTELRISDLKGSSSSFPNLQDMKKMERLILRNCLITGRIPEYIEDMTDLKILDLSFNQL 313 (764)
Q Consensus 234 L~L~~N~l~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 313 (764)
+.+..+ +.......|..+.+|+.+.+.++......-..|.++.+|+.+.|..+ ++..-..+|.++++|+.+.+..+ +
T Consensus 268 i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~-v 344 (379)
T 4h09_A 268 LNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS-I 344 (379)
T ss_dssp EEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT-C
T ss_pred cccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc-c
Confidence 777543 44334456777777777777664444444445777777777777644 55444567778888888877654 4
Q ss_pred CCCccccccCCC
Q 004275 314 TGPVPGILQNLK 325 (764)
Q Consensus 314 ~g~~p~~~~~l~ 325 (764)
+..-..+|.++.
T Consensus 345 ~~I~~~aF~~c~ 356 (379)
T 4h09_A 345 TLIESGAFEGSS 356 (379)
T ss_dssp CEECTTTTTTSS
T ss_pred CEEchhHhhCCC
Confidence 433344565554
No 414
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.52 E-value=2.3e-05 Score=74.25 Aligned_cols=34 Identities=15% Similarity=0.097 Sum_probs=15.0
Q ss_pred CCCEEEccCCcCCccCchhhhcCCCCcEEecccC
Q 004275 110 FLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGN 143 (764)
Q Consensus 110 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n 143 (764)
.|+.|||+++.++..--..+..+++|++|+|++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C 95 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKC 95 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCC
Confidence 3444455444444332233344444444444444
No 415
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.41 E-value=6.6e-05 Score=71.08 Aligned_cols=35 Identities=6% Similarity=-0.044 Sum_probs=17.9
Q ss_pred CCCcEEecccCcCcccCCcCcCCCCCCCEEEeeCC
Q 004275 133 QNLTKLLILGNRLSGSIPLEIGDISTLEELVLEDN 167 (764)
Q Consensus 133 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N 167 (764)
.+|+.||++++.++..--..+..+++|++|+|++|
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C 95 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKC 95 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESC
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCC
Confidence 34666666666554333333444555555555554
No 416
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=97.23 E-value=0.00074 Score=68.59 Aligned_cols=89 Identities=12% Similarity=0.027 Sum_probs=71.1
Q ss_pred HhhcCccccCeeeccCCeeEEEEEEcCCCEEEEEEcCCcChhcHHHHHHHHHHHHhCC-CCCccceEEEEEECCEEEEEE
Q 004275 656 AATNNFDAANKIGEGGFGPVYKGTLSDGAVIAVKQLSSKSKQGNREFVNEIGMISALQ-HQNLVKLYGCCIEGNQLLLVY 734 (764)
Q Consensus 656 ~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lv~ 734 (764)
.....|......+.|+.+.||+.... +..+++|............+.+|++++..++ |..+.++++++...+..|+||
T Consensus 11 ~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~ 89 (263)
T 3tm0_A 11 KLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLM 89 (263)
T ss_dssp HHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEE
T ss_pred HHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEE
Confidence 34456777778888889999999754 6789999986532223346889999999885 677889999999989999999
Q ss_pred cccCCCcHHHH
Q 004275 735 EYLENNSLARA 745 (764)
Q Consensus 735 Ey~~~GsL~~~ 745 (764)
||++|.+|.+.
T Consensus 90 e~i~G~~l~~~ 100 (263)
T 3tm0_A 90 SEADGVLCSEE 100 (263)
T ss_dssp ECCSSEEHHHH
T ss_pred EecCCeehhhc
Confidence 99999998775
No 417
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=97.18 E-value=0.00057 Score=70.72 Aligned_cols=77 Identities=19% Similarity=0.208 Sum_probs=62.1
Q ss_pred cccCeeeccCCeeEEEEEEcCCCEEEEEEcCCcChhcHHHHHHHHHHHHhCCCC---CccceEEEEEECCEEEEEEcccC
Q 004275 662 DAANKIGEGGFGPVYKGTLSDGAVIAVKQLSSKSKQGNREFVNEIGMISALQHQ---NLVKLYGCCIEGNQLLLVYEYLE 738 (764)
Q Consensus 662 ~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~---niv~l~g~~~~~~~~~lv~Ey~~ 738 (764)
...+.++.|.++.||+.+..+|..++||+...........|.+|++.|+.++|. .+.+++++. ..++||||++
T Consensus 18 ~~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~ 93 (288)
T 3d1u_A 18 AAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVD 93 (288)
T ss_dssp EEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCC
T ss_pred cceeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEecc
Confidence 345679999999999999989999999997543332345789999999999876 477887764 3689999999
Q ss_pred CCcH
Q 004275 739 NNSL 742 (764)
Q Consensus 739 ~GsL 742 (764)
++.+
T Consensus 94 g~~~ 97 (288)
T 3d1u_A 94 ERPP 97 (288)
T ss_dssp CCCC
T ss_pred cCCC
Confidence 9874
No 418
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=96.61 E-value=0.0013 Score=66.45 Aligned_cols=81 Identities=17% Similarity=0.134 Sum_probs=60.8
Q ss_pred CccccCeeeccCCeeEEEEEEcCCCEEEEEEcCCcChhcHHHHHHHHHHHHhCCCCC--ccceEEEEEECCEEEEEEccc
Q 004275 660 NFDAANKIGEGGFGPVYKGTLSDGAVIAVKQLSSKSKQGNREFVNEIGMISALQHQN--LVKLYGCCIEGNQLLLVYEYL 737 (764)
Q Consensus 660 ~~~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~n--iv~l~g~~~~~~~~~lv~Ey~ 737 (764)
.+....+.+.|..+.||+....+|..+++|..... ....+.+|++++..+++.+ +.+++++....+..++||||+
T Consensus 21 ~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i 97 (264)
T 1nd4_A 21 GYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEV 97 (264)
T ss_dssp TCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECC
T ss_pred CCceEecccCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEec
Confidence 34443333456679999998777888999997654 2245788999999886555 456888887777889999999
Q ss_pred CCCcHH
Q 004275 738 ENNSLA 743 (764)
Q Consensus 738 ~~GsL~ 743 (764)
++.++.
T Consensus 98 ~G~~l~ 103 (264)
T 1nd4_A 98 PGQDLL 103 (264)
T ss_dssp SSEETT
T ss_pred CCcccC
Confidence 998874
No 419
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.18 E-value=0.0013 Score=63.31 Aligned_cols=87 Identities=18% Similarity=0.134 Sum_probs=45.3
Q ss_pred CCCCCCCCEEEccCC-cCCcc----CchhhhcCCCCcEEecccCcCccc----CCcCcCCCCCCCEEEeeCCcCCCC---
Q 004275 105 FGNLTFLQEVDLSRN-YFNGS----LPKSFARLQNLTKLLILGNRLSGS----IPLEIGDISTLEELVLEDNQLVGP--- 172 (764)
Q Consensus 105 l~~L~~L~~L~Ls~N-~l~~~----~p~~~~~l~~L~~L~Ls~n~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~--- 172 (764)
+.+-+.|++|+|++| .|... +-+.+..-+.|+.|+|++|.+... +-..+..-+.|++|+|+.|.|...
T Consensus 37 l~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ 116 (197)
T 1pgv_A 37 REDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLA 116 (197)
T ss_dssp HTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHH
T ss_pred HhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHH
Confidence 445566777777764 55421 333444556667777777766532 122233445666666666665421
Q ss_pred -CCccCCCCCCCcEEEccCc
Q 004275 173 -LPENLGNLKSLRRILLSSN 191 (764)
Q Consensus 173 -~p~~l~~l~~L~~L~Ls~N 191 (764)
+-..+..-+.|+.|+|++|
T Consensus 117 ala~aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 117 RLLRSTLVTQSIVEFKADNQ 136 (197)
T ss_dssp HHHHHTTTTCCCSEEECCCC
T ss_pred HHHHHHhhCCceeEEECCCC
Confidence 1122333444566665543
No 420
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=95.97 E-value=0.0017 Score=62.54 Aligned_cols=87 Identities=22% Similarity=0.203 Sum_probs=48.1
Q ss_pred hhhcCCCCcEEecccC-cCcc----cCCcCcCCCCCCCEEEeeCCcCCCC----CCccCCCCCCCcEEEccCccCCCC--
Q 004275 128 SFARLQNLTKLLILGN-RLSG----SIPLEIGDISTLEELVLEDNQLVGP----LPENLGNLKSLRRILLSSNNFTGS-- 196 (764)
Q Consensus 128 ~~~~l~~L~~L~Ls~n-~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~l~~l~~L~~L~Ls~N~l~~~-- 196 (764)
.+.+-+.|++|+|++| .+.. .+-..+..-+.|+.|+|++|.+... +...+..-+.|++|+|++|.|+..
T Consensus 36 ll~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga 115 (197)
T 1pgv_A 36 LREDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELL 115 (197)
T ss_dssp HHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHH
T ss_pred HHhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHH
Confidence 3444567888888875 6542 1333455566777777777776532 222233445677777777776531
Q ss_pred --CcccccCCCCCcEEEccC
Q 004275 197 --IPESYGNLKNLTEFRIDG 214 (764)
Q Consensus 197 --~p~~~~~l~~L~~L~L~~ 214 (764)
+-+.+..-+.|++|+|++
T Consensus 116 ~ala~aL~~N~tL~~L~L~n 135 (197)
T 1pgv_A 116 ARLLRSTLVTQSIVEFKADN 135 (197)
T ss_dssp HHHHHHTTTTCCCSEEECCC
T ss_pred HHHHHHHhhCCceeEEECCC
Confidence 122333334455555543
No 421
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=95.88 E-value=0.011 Score=53.08 Aligned_cols=57 Identities=25% Similarity=0.230 Sum_probs=42.5
Q ss_pred cccccccccc-ccCCccccCCCCCCEEeccCCCCCCCccccccCCCCCCEEeccCCcCcC
Q 004275 281 RLILRNCLIT-GRIPEYIEDMTDLKILDLSFNQLTGPVPGILQNLKKIDYIFLTNNSLSG 339 (764)
Q Consensus 281 ~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g 339 (764)
.++.+++.++ ..+|..+. ++|++|+|++|+|+...+..|..+++|+.|+|++|.+.-
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~C 69 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWRC 69 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCBC
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCeec
Confidence 5666777775 35554432 578899999999987777788888888888888887763
No 422
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=95.29 E-value=0.031 Score=49.95 Aligned_cols=34 Identities=38% Similarity=0.435 Sum_probs=13.5
Q ss_pred CCEEEeeCCcCCCCCCccCCCCCCCcEEEccCcc
Q 004275 159 LEELVLEDNQLVGPLPENLGNLKSLRRILLSSNN 192 (764)
Q Consensus 159 L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~ 192 (764)
|++|+|++|+|+...+..|..+++|+.|+|++|.
T Consensus 33 l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP 66 (130)
T 3rfe_A 33 TTELVLTGNNLTALPPGLLDALPALRTAHLGANP 66 (130)
T ss_dssp CSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSC
T ss_pred CCEEECCCCcCCccChhhhhhccccCEEEecCCC
Confidence 4444444444443323333334444444444433
No 423
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=93.57 E-value=0.13 Score=52.63 Aligned_cols=78 Identities=19% Similarity=0.231 Sum_probs=56.7
Q ss_pred ccccCeeeccCCeeEEEEEEcCCCEEEEEEcCCcChhcHHHHHHHHHHHHhCCCC---CccceEEEEEECCEEEEEEccc
Q 004275 661 FDAANKIGEGGFGPVYKGTLSDGAVIAVKQLSSKSKQGNREFVNEIGMISALQHQ---NLVKLYGCCIEGNQLLLVYEYL 737 (764)
Q Consensus 661 ~~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~---niv~l~g~~~~~~~~~lv~Ey~ 737 (764)
+.....+|.|..+.||+.++.||+.|.||+-..........|.+|.+.|..+.-. -+.+.+++ . .-++||||+
T Consensus 17 v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~--~--~~~lv~e~l 92 (288)
T 3f7w_A 17 VAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGW--D--DRTLAMEWV 92 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE--E--TTEEEEECC
T ss_pred eEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEec--c--CceEEEEee
Confidence 4456778999999999999999999999987654333345688999998877422 23444443 2 247899999
Q ss_pred CCCcH
Q 004275 738 ENNSL 742 (764)
Q Consensus 738 ~~GsL 742 (764)
+.+..
T Consensus 93 ~~~~~ 97 (288)
T 3f7w_A 93 DERPP 97 (288)
T ss_dssp CCCCC
T ss_pred cccCC
Confidence 87653
No 424
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=92.87 E-value=0.063 Score=56.94 Aligned_cols=78 Identities=14% Similarity=0.306 Sum_probs=56.2
Q ss_pred cCeeeccCCeeEEEEEEcCCCEEEEEEcC--CcCh-hcHHHHHHHHHHHHhCC--CCCccceEEEEEEC---CEEEEEEc
Q 004275 664 ANKIGEGGFGPVYKGTLSDGAVIAVKQLS--SKSK-QGNREFVNEIGMISALQ--HQNLVKLYGCCIEG---NQLLLVYE 735 (764)
Q Consensus 664 ~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~--~~~~-~~~~~f~~E~~~l~~l~--H~niv~l~g~~~~~---~~~~lv~E 735 (764)
.+.++.|.++.||+....+ ..+++|+.. .... .....+.+|.+++..++ +..+.++++++.+. +..|+|||
T Consensus 43 ~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme 121 (359)
T 3dxp_A 43 VEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIME 121 (359)
T ss_dssp EEECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEE
T ss_pred EEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEE
Confidence 4568999999999988754 578888876 3321 12356889999999887 45678899988766 44799999
Q ss_pred ccCCCcH
Q 004275 736 YLENNSL 742 (764)
Q Consensus 736 y~~~GsL 742 (764)
|+++..+
T Consensus 122 ~v~G~~l 128 (359)
T 3dxp_A 122 FVSGRVL 128 (359)
T ss_dssp CCCCBCC
T ss_pred ecCCeec
Confidence 9998766
No 425
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=90.75 E-value=0.69 Score=46.39 Aligned_cols=78 Identities=12% Similarity=0.107 Sum_probs=57.9
Q ss_pred eeeccCCe-eEEEEEE-cCCCEEEEEEcCCcChhcHHHHHHHHHHHHhCC-CCCccceEEEEEECCEEEEEEcccCCCcH
Q 004275 666 KIGEGGFG-PVYKGTL-SDGAVIAVKQLSSKSKQGNREFVNEIGMISALQ-HQNLVKLYGCCIEGNQLLLVYEYLENNSL 742 (764)
Q Consensus 666 ~iG~G~~g-~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lv~Ey~~~GsL 742 (764)
.+..|..| .||+-.. .++..+.||+-... ...++.+|.+.|..+. +--+-++++++...+..++||||+++.++
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~ 107 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTA 107 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEH
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccc
Confidence 45556655 6898774 35667888886543 3457889999998774 33466889999999999999999999887
Q ss_pred HHHH
Q 004275 743 ARAL 746 (764)
Q Consensus 743 ~~~L 746 (764)
.+..
T Consensus 108 ~~~~ 111 (272)
T 4gkh_A 108 FQVL 111 (272)
T ss_dssp HHHH
T ss_pred cccc
Confidence 6554
No 426
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=90.21 E-value=0.48 Score=49.12 Aligned_cols=76 Identities=17% Similarity=0.163 Sum_probs=59.9
Q ss_pred ccCeeeccCCeeEEEEEEcCCCEEEEEEcCCcChhcHHHHHHHHHHHHhCC---CCCccceEEEEEECCEEEEEEcccCC
Q 004275 663 AANKIGEGGFGPVYKGTLSDGAVIAVKQLSSKSKQGNREFVNEIGMISALQ---HQNLVKLYGCCIEGNQLLLVYEYLEN 739 (764)
Q Consensus 663 ~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~---H~niv~l~g~~~~~~~~~lv~Ey~~~ 739 (764)
....|+.|....+|+... ++..++||.-... ....|.+|.+.|..+. ...+.+.++++...+..++||||+++
T Consensus 40 ~~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G 115 (312)
T 3jr1_A 40 HKEKLYSGEMNEIWLIND-EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNK 115 (312)
T ss_dssp EEEEECCSSSSEEEEEES-SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCC
T ss_pred eeEEeCCccceeeeEEEE-CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccC
Confidence 345789999999999886 4667888887543 3457889998888774 35688899998888889999999998
Q ss_pred CcH
Q 004275 740 NSL 742 (764)
Q Consensus 740 GsL 742 (764)
..+
T Consensus 116 ~~~ 118 (312)
T 3jr1_A 116 SKN 118 (312)
T ss_dssp CCC
T ss_pred CCC
Confidence 764
No 427
>2jwp_A Malectin, MGC80075; sugar binding, sugar binding protein; NMR {Xenopus laevis} PDB: 2k46_A* 2kr2_A*
Probab=88.66 E-value=0.91 Score=42.53 Aligned_cols=82 Identities=28% Similarity=0.496 Sum_probs=60.6
Q ss_pred hhHhhhhccCccceeEecccccCCcceEEEEcccccccCccccccccceEEEEEeCCeeecceeccchhcCCCCcceeee
Q 004275 469 AEYYKTARLAPQSLKYYGLCMLKGSYTVKLHFAEIMFTNDQTYKSLGKRMFDVSIQGKQVLKDFDIMEEAGGVGIGITRE 548 (764)
Q Consensus 469 ~~~~~~~~~~~~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~~~~~ 548 (764)
..++.+++..+.++++...+..+|.+.+.|+|.+..+. ..++|.|+++++|...+.+||+...+|+ ..++.+.
T Consensus 54 ~~lY~TaR~~~~~~tY~f~v~~~G~Y~VrLhF~ei~~~------~~~~rvFdV~ing~~~l~~fdi~~~ag~-~~~~~~~ 126 (174)
T 2jwp_A 54 QVLYQTERYNEDSFGYDIPIKEEGEYVLVLKFAEVYFA------QSQQKVFDVRVNGHTVVKDLDIFDRVGH-STAHDEI 126 (174)
T ss_dssp HHTTTCCCCCCSCEEEEEECCSCEEEEEEEEEECCSCC------CSSSSCEEEEETTEEEEEEECHHHHHSS-SSCEEEE
T ss_pred chhhhhhccCCCCeEEEEEeCCCeEEEEEEEEeccccC------CCCCeEeEEEECCEEeecCcCHHHhhCC-CeeEEEE
Confidence 45667777777777776666778999999999998643 4688999999999999999999888775 3334444
Q ss_pred eeeeeecCCc
Q 004275 549 FKDVSVNGST 558 (764)
Q Consensus 549 ~~~~~~s~n~ 558 (764)
+. +++..+.
T Consensus 127 ~~-~~v~~~~ 135 (174)
T 2jwp_A 127 IP-ISIKKGK 135 (174)
T ss_dssp EE-EEEETTE
T ss_pred EE-EEEecCc
Confidence 43 4444443
No 428
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=88.66 E-value=0.43 Score=51.17 Aligned_cols=76 Identities=17% Similarity=0.181 Sum_probs=49.9
Q ss_pred cCeeeccCCeeEEEEEEc-CCCEEEEEEcCCcCh-------hcHHHHHHHHHHHHhCCC--CCcc-ceEEEEEECCEEEE
Q 004275 664 ANKIGEGGFGPVYKGTLS-DGAVIAVKQLSSKSK-------QGNREFVNEIGMISALQH--QNLV-KLYGCCIEGNQLLL 732 (764)
Q Consensus 664 ~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~~-------~~~~~f~~E~~~l~~l~H--~niv-~l~g~~~~~~~~~l 732 (764)
.+.+|.|.++.||++... ++..++||....... .....+..|.+++..+.+ +..| +++.+ +.+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 457899999999999743 467899998653211 123456788888887642 3444 55543 4555689
Q ss_pred EEcccCCCc
Q 004275 733 VYEYLENNS 741 (764)
Q Consensus 733 v~Ey~~~Gs 741 (764)
||||+++..
T Consensus 113 vmE~l~g~~ 121 (397)
T 2olc_A 113 VMEDLSHLK 121 (397)
T ss_dssp EECCCTTSE
T ss_pred EEEeCCCcc
Confidence 999998743
No 429
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=86.11 E-value=1.2 Score=46.19 Aligned_cols=73 Identities=8% Similarity=0.112 Sum_probs=53.2
Q ss_pred ccccCeeeccCCeeEEEEEEcCCCEEEEEEcCCcChhcHHHHHHHHHHHHhCCC----CCccceEEEEEECCEEEEEEcc
Q 004275 661 FDAANKIGEGGFGPVYKGTLSDGAVIAVKQLSSKSKQGNREFVNEIGMISALQH----QNLVKLYGCCIEGNQLLLVYEY 736 (764)
Q Consensus 661 ~~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H----~niv~l~g~~~~~~~~~lv~Ey 736 (764)
+...+.++.|....||+. |..+++|..... .....+.+|.+++..+++ ..+.+++++ +..++||||
T Consensus 39 i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~--~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme~ 108 (320)
T 3r70_A 39 INELRYLSSGDDSDTFLC----NEQYVVKVPKRD--SVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMKY 108 (320)
T ss_dssp CSCEEEEEECSSEEEEEE----TTTEEEEEESSH--HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEEC
T ss_pred eEEEEeCCCCCCceEEEE----CCEEEEEeCCcH--HHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEee
Confidence 445677899999999987 566888876432 123468899999988876 123455544 567899999
Q ss_pred cCCCcHH
Q 004275 737 LENNSLA 743 (764)
Q Consensus 737 ~~~GsL~ 743 (764)
+++.++.
T Consensus 109 i~G~~l~ 115 (320)
T 3r70_A 109 IKGERIT 115 (320)
T ss_dssp CCCBCCC
T ss_pred cCCcccc
Confidence 9998875
No 430
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=84.23 E-value=2.7 Score=44.38 Aligned_cols=74 Identities=8% Similarity=0.048 Sum_probs=56.0
Q ss_pred ccCeeeccCCeeEEEEEEcCCCEEEEEEcCCcChhcHHHHHHHHHHHHhCCCCC--ccceEEEEEEC-CEEEEEEcccCC
Q 004275 663 AANKIGEGGFGPVYKGTLSDGAVIAVKQLSSKSKQGNREFVNEIGMISALQHQN--LVKLYGCCIEG-NQLLLVYEYLEN 739 (764)
Q Consensus 663 ~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~n--iv~l~g~~~~~-~~~~lv~Ey~~~ 739 (764)
....++.|....+|+... +|..+++|.-... ..+.+|.+++..+.... +.++++++... +..|+||||+++
T Consensus 45 ~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G 118 (362)
T 3ovc_A 45 DLMQLSEGEESRAFSFDV-GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQG 118 (362)
T ss_dssp EEEEEEECSSEEEEEEEE-TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCS
T ss_pred eEEECCCCCcceEEEEEE-CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCC
Confidence 345688999999999876 5778889887543 25888999998886544 45677777654 568999999997
Q ss_pred CcH
Q 004275 740 NSL 742 (764)
Q Consensus 740 GsL 742 (764)
..+
T Consensus 119 ~~l 121 (362)
T 3ovc_A 119 VTL 121 (362)
T ss_dssp EET
T ss_pred CCc
Confidence 655
No 431
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=83.67 E-value=0.15 Score=56.05 Aligned_cols=60 Identities=7% Similarity=0.081 Sum_probs=18.1
Q ss_pred cCeeeccCCeeEEEEEEcC-CCEEEE------EEcCCcC--hhcHHHHHHHHHHHHhCCCCCccceEEEEEE
Q 004275 664 ANKIGEGGFGPVYKGTLSD-GAVIAV------KQLSSKS--KQGNREFVNEIGMISALQHQNLVKLYGCCIE 726 (764)
Q Consensus 664 ~~~iG~G~~g~Vy~~~~~~-g~~vAv------K~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~ 726 (764)
.+.+| ||.||+|.+.. ..+||| |...... .....+|.+|..++...+|+|+++.+++...
T Consensus 147 ~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~ 215 (463)
T 3cxl_A 147 YEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH 215 (463)
T ss_dssp TTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEEE
T ss_pred cccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEEe
Confidence 34565 99999999754 367888 7665422 2234579999999999999999999998765
No 432
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=82.29 E-value=2.3 Score=43.69 Aligned_cols=75 Identities=17% Similarity=0.153 Sum_probs=54.4
Q ss_pred cCeeeccCCeeEEEEEEcCCCEEEEEEcCCcChhcHHHHHHHHHHHHhCCCC---CccceEEEEE-ECCEEEEEEcccCC
Q 004275 664 ANKIGEGGFGPVYKGTLSDGAVIAVKQLSSKSKQGNREFVNEIGMISALQHQ---NLVKLYGCCI-EGNQLLLVYEYLEN 739 (764)
Q Consensus 664 ~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~---niv~l~g~~~-~~~~~~lv~Ey~~~ 739 (764)
...++.|....||+. |..++||.-.. ......+.+|.+++..+++. -+.+.++++. ..+..++||||++|
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~~--~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G 97 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPKS--QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQG 97 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCS
T ss_pred eeecCCCcceeEEEE----CCEEEEEecCC--chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCC
Confidence 346788888899987 45677887432 22346789999999998753 2556677764 34457899999999
Q ss_pred CcHHH
Q 004275 740 NSLAR 744 (764)
Q Consensus 740 GsL~~ 744 (764)
..+.+
T Consensus 98 ~~l~~ 102 (306)
T 3tdw_A 98 QILGE 102 (306)
T ss_dssp EECHH
T ss_pred eECch
Confidence 88765
No 433
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=77.38 E-value=0.82 Score=48.06 Aligned_cols=80 Identities=8% Similarity=0.029 Sum_probs=54.6
Q ss_pred cCee-eccCCeeEEEEEEc-------CCCEEEEEEcCCcC---hhcHHHHHHHHHHHHhCC-C--CCccceEEEEEEC--
Q 004275 664 ANKI-GEGGFGPVYKGTLS-------DGAVIAVKQLSSKS---KQGNREFVNEIGMISALQ-H--QNLVKLYGCCIEG-- 727 (764)
Q Consensus 664 ~~~i-G~G~~g~Vy~~~~~-------~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~-H--~niv~l~g~~~~~-- 727 (764)
.+.| +.|....+|+.... ++..+++|.-.... ......+.+|.+++..++ | -.+.++++++...
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~ 104 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV 104 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence 3567 78889999988764 25678888865432 101245778888888775 2 3466788877654
Q ss_pred -CEEEEEEcccCCCcHH
Q 004275 728 -NQLLLVYEYLENNSLA 743 (764)
Q Consensus 728 -~~~~lv~Ey~~~GsL~ 743 (764)
+..++||||+++..+.
T Consensus 105 ~g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 105 LGTPFFLMDYVEGVVPP 121 (357)
T ss_dssp TSSCEEEEECCCCBCCC
T ss_pred cCCceEEEEecCCCChh
Confidence 3468999999986543
No 434
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=75.74 E-value=3.6 Score=28.58 Aligned_cols=13 Identities=15% Similarity=0.276 Sum_probs=5.9
Q ss_pred eehHhHHHHHHHH
Q 004275 604 AIVGIVAGSCAVV 616 (764)
Q Consensus 604 ~~~~i~~~~~~~~ 616 (764)
++.+++.|+++++
T Consensus 13 IA~gVVgGv~~~~ 25 (44)
T 2ks1_B 13 IATGMVGALLLLL 25 (44)
T ss_dssp STHHHHHHHHHHH
T ss_pred EEeehhHHHHHHH
Confidence 3445555444433
No 435
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=75.22 E-value=3 Score=28.03 Aligned_cols=18 Identities=33% Similarity=0.549 Sum_probs=11.1
Q ss_pred CccceeehHhHHHHHHHH
Q 004275 599 GLSAGAIVGIVAGSCAVV 616 (764)
Q Consensus 599 ~~~~~~~~~i~~~~~~~~ 616 (764)
+.+.+.+.+++++.++.+
T Consensus 7 ~ls~GaIAGiVvG~v~gv 24 (38)
T 2k1k_A 7 GLTGGEIVAVIFGLLLGA 24 (38)
T ss_dssp TCCHHHHHHHHHHHHHHH
T ss_pred CCCCCceeeeehHHHHHH
Confidence 445667777777765433
No 436
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=71.73 E-value=3.9 Score=28.42 Aligned_cols=12 Identities=25% Similarity=0.576 Sum_probs=5.0
Q ss_pred ehHhHHHHHHHH
Q 004275 605 IVGIVAGSCAVV 616 (764)
Q Consensus 605 ~~~i~~~~~~~~ 616 (764)
+.+++.|+++++
T Consensus 13 A~gVVgGv~~v~ 24 (44)
T 2l2t_A 13 AAGVIGGLFILV 24 (44)
T ss_dssp HHHHHHHHHHHH
T ss_pred EEeehHHHHHHH
Confidence 334444444333
No 437
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=67.68 E-value=3.3 Score=42.19 Aligned_cols=75 Identities=12% Similarity=0.163 Sum_probs=51.1
Q ss_pred cCeeeccCCeeEEEEEEcCCCEEEEEEcCCcChhcHHHHHHHHHHHHhCC-CCC--ccceEEEEEECC---EEEEEEccc
Q 004275 664 ANKIGEGGFGPVYKGTLSDGAVIAVKQLSSKSKQGNREFVNEIGMISALQ-HQN--LVKLYGCCIEGN---QLLLVYEYL 737 (764)
Q Consensus 664 ~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~-H~n--iv~l~g~~~~~~---~~~lv~Ey~ 737 (764)
.+.++.|....||+.. ..+++|.-... .....+.+|.+++..+. |.. +.+.++++...+ ..|+||||+
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i 98 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKI 98 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEccc
Confidence 4568999999999863 45788886432 23467899999998874 333 334444433332 348999999
Q ss_pred CCCcHHH
Q 004275 738 ENNSLAR 744 (764)
Q Consensus 738 ~~GsL~~ 744 (764)
+|..+.+
T Consensus 99 ~G~~l~~ 105 (304)
T 3sg8_A 99 KGVPLTP 105 (304)
T ss_dssp CCEECCH
T ss_pred CCeECCc
Confidence 9988754
No 438
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=64.19 E-value=10 Score=38.92 Aligned_cols=73 Identities=18% Similarity=0.320 Sum_probs=41.3
Q ss_pred CeeeccCCeeEEEEEEcCCCEEEEEEcCCcChhcHHHHHHHHHHHHhC-----CCCCccceE-E--EEEECCEEEEEEcc
Q 004275 665 NKIGEGGFGPVYKGTLSDGAVIAVKQLSSKSKQGNREFVNEIGMISAL-----QHQNLVKLY-G--CCIEGNQLLLVYEY 736 (764)
Q Consensus 665 ~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-----~H~niv~l~-g--~~~~~~~~~lv~Ey 736 (764)
..++.|..+.||+...++| .+++|+.... ..+...|.+++..+ ..|.++.-. | +....+..++||||
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~ 112 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRP----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDW 112 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECSC----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEEC
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCCC----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEe
Confidence 3456677889999987655 4889998752 12333444444433 234444310 1 12346778999999
Q ss_pred cCCCcH
Q 004275 737 LENNSL 742 (764)
Q Consensus 737 ~~~GsL 742 (764)
+++..+
T Consensus 113 i~G~~~ 118 (346)
T 2q83_A 113 IEGRPF 118 (346)
T ss_dssp CCCBCC
T ss_pred ecCccC
Confidence 998643
No 439
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=60.10 E-value=12 Score=25.93 Aligned_cols=8 Identities=38% Similarity=0.625 Sum_probs=3.4
Q ss_pred ehHhHHHH
Q 004275 605 IVGIVAGS 612 (764)
Q Consensus 605 ~~~i~~~~ 612 (764)
+++.++|+
T Consensus 14 Ia~~vVGv 21 (44)
T 2jwa_A 14 IISAVVGI 21 (44)
T ss_dssp HHHHHHHH
T ss_pred hHHHHHHH
Confidence 34444443
No 440
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=57.70 E-value=17 Score=37.15 Aligned_cols=74 Identities=11% Similarity=0.038 Sum_probs=48.5
Q ss_pred eeeccCCeeEEEEEEcCCCEEEEEEcCCcChhcHHHHHHHHHHHHhCCCC--CccceEEE-----EEECCEEEEEEcccC
Q 004275 666 KIGEGGFGPVYKGTLSDGAVIAVKQLSSKSKQGNREFVNEIGMISALQHQ--NLVKLYGC-----CIEGNQLLLVYEYLE 738 (764)
Q Consensus 666 ~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~--niv~l~g~-----~~~~~~~~lv~Ey~~ 738 (764)
.++ |....||+....+|+.+++|....... ....+..|.+++..++.. .+.+++.. ....+..++||||++
T Consensus 33 ~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~-~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i~ 110 (328)
T 1zyl_A 33 PLN-SYENRVYQFQDEDRRRFVVKFYRPERW-TADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVG 110 (328)
T ss_dssp EEC-CSSSEEEEECCTTCCCEEEEEECTTTS-CHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCC
T ss_pred eec-CcccceEEEEcCCCCEEEEEEcCCCCC-CHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEecC
Confidence 466 778899998877787899999864311 234566787777766422 23444432 223456788999998
Q ss_pred CCc
Q 004275 739 NNS 741 (764)
Q Consensus 739 ~Gs 741 (764)
+..
T Consensus 111 G~~ 113 (328)
T 1zyl_A 111 GRQ 113 (328)
T ss_dssp CEE
T ss_pred CCC
Confidence 754
No 441
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=47.43 E-value=27 Score=35.43 Aligned_cols=90 Identities=10% Similarity=0.086 Sum_probs=49.7
Q ss_pred ccHHHHHHhhcCccc-----cCeeeccCCeeEEEEEEcCCCEEEEEEcCCcChhcHHHHHHHHHHHHhCCCCC--ccceE
Q 004275 649 FTLRQIKAATNNFDA-----ANKIGEGGFGPVYKGTLSDGAVIAVKQLSSKSKQGNREFVNEIGMISALQHQN--LVKLY 721 (764)
Q Consensus 649 ~~~~~~~~~~~~~~~-----~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~n--iv~l~ 721 (764)
++.+++......|.. ...|+.|....+|+....+| .+++|...... ...++..|++++..++... +.+++
T Consensus 7 ~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~--~~~~l~~e~~~l~~L~~~g~~vP~~~ 83 (322)
T 2ppq_A 7 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPLPL 83 (322)
T ss_dssp CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBC
T ss_pred CCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCC--CHHHHHHHHHHHHHHHHCCCCCCccc
Confidence 344555444444443 24466788889999987666 57788886521 1234556777776553222 22333
Q ss_pred EE------EEECCEEEEEEcccCCCc
Q 004275 722 GC------CIEGNQLLLVYEYLENNS 741 (764)
Q Consensus 722 g~------~~~~~~~~lv~Ey~~~Gs 741 (764)
.. ....+..++||||+++..
T Consensus 84 ~~~~g~~~~~~~g~~~~l~~~l~G~~ 109 (322)
T 2ppq_A 84 PRKDGELLGELSGRPAALISFLEGMW 109 (322)
T ss_dssp CBTTCCSCEEETTEEEEEEECCCCBC
T ss_pred CCCCCCEEEEECCEEEEEEEeCCCcC
Confidence 11 123466789999999754
No 442
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=43.59 E-value=18 Score=38.85 Aligned_cols=73 Identities=21% Similarity=0.286 Sum_probs=49.4
Q ss_pred cCeeeccCCeeEEEEEEcC--------CCEEEEEEcCCcChhcHHHHHHHHHHHHhCCCCCc-cceEEEEEECCEEEEEE
Q 004275 664 ANKIGEGGFGPVYKGTLSD--------GAVIAVKQLSSKSKQGNREFVNEIGMISALQHQNL-VKLYGCCIEGNQLLLVY 734 (764)
Q Consensus 664 ~~~iG~G~~g~Vy~~~~~~--------g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~ni-v~l~g~~~~~~~~~lv~ 734 (764)
...|+.|....+|+...++ +..+.+|+.... .....+.+|.+++..+...++ .++++.+. + .+||
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~~~~~li~E~~~l~~L~~~g~~P~l~~~~~--~--g~v~ 151 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ETESHLVAESVIFTLLSERHLGPKLYGIFS--G--GRLE 151 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CCHHHHHHHHHHHHHHHHTTSSSCEEEEET--T--EEEE
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--CcHHHHHHHHHHHHHHHhCCCCCcEEEEeC--C--CEEE
Confidence 3467888889999998763 468888887432 112456789988888754444 56666542 3 3899
Q ss_pred cccCCCcH
Q 004275 735 EYLENNSL 742 (764)
Q Consensus 735 Ey~~~GsL 742 (764)
||+++-.+
T Consensus 152 e~l~G~~l 159 (429)
T 1nw1_A 152 EYIPSRPL 159 (429)
T ss_dssp CCCCEEEC
T ss_pred EEeCCccc
Confidence 99986443
No 443
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=42.72 E-value=28 Score=37.08 Aligned_cols=73 Identities=15% Similarity=0.193 Sum_probs=45.3
Q ss_pred cCeeeccCCeeEEEEEEcCCCEEEEEEcCCc----Ch-----hcHHHHHHHHHHHH-hCCCCCccceEEEEEECCEEEEE
Q 004275 664 ANKIGEGGFGPVYKGTLSDGAVIAVKQLSSK----SK-----QGNREFVNEIGMIS-ALQHQNLVKLYGCCIEGNQLLLV 733 (764)
Q Consensus 664 ~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~----~~-----~~~~~f~~E~~~l~-~l~H~niv~l~g~~~~~~~~~lv 733 (764)
.+.+|.|....||+... ++..++||..... .. .....+..|+..+. ...+..+.+++++. .+..++|
T Consensus 39 i~~l~~G~~n~vyrv~~-~~~~~vvK~~~p~~~~~~~~~~~~~~~~~~E~e~l~~~~~~~~~~vP~v~~~~--~~~~~lv 115 (420)
T 2pyw_A 39 IKEVGDGNLNFVFIVVG-SSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFD--RTMALIG 115 (420)
T ss_dssp EEECCCSSSCEEEEEEC-SSCEEEEEECCSBCTTTCTTSBCCTTHHHHHHHHHHHHHHHSGGGSCCEEEEE--TTTTEEE
T ss_pred EEEccCCCcEEEEEEEc-CCceEEEEECchhhcccCcccccchhHHHHHHHHHHHHHhhCCCCCCeEEEEC--CCccEEE
Confidence 45689999999999964 4678999953211 11 12234444543332 22234566666665 5667899
Q ss_pred Eccc-CC
Q 004275 734 YEYL-EN 739 (764)
Q Consensus 734 ~Ey~-~~ 739 (764)
|||+ ++
T Consensus 116 ~e~l~~g 122 (420)
T 2pyw_A 116 MRYLEPP 122 (420)
T ss_dssp ECCCCTT
T ss_pred EeecCCc
Confidence 9999 76
No 444
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=35.96 E-value=82 Score=31.91 Aligned_cols=79 Identities=11% Similarity=0.095 Sum_probs=41.7
Q ss_pred CeeeccCCee-EEEEEEcCCCEEEEEEcCCcChhcHHHHHHHHHHHHhCCC--CCccceEEEEEECCEEEEEEcccCCCc
Q 004275 665 NKIGEGGFGP-VYKGTLSDGAVIAVKQLSSKSKQGNREFVNEIGMISALQH--QNLVKLYGCCIEGNQLLLVYEYLENNS 741 (764)
Q Consensus 665 ~~iG~G~~g~-Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H--~niv~l~g~~~~~~~~~lv~Ey~~~Gs 741 (764)
..++.|.... +|+....+|..+++|....... .++..|++++..++. -.+.+++.++...+ ++|||++.+..
T Consensus 24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~---~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~~~ 98 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG---GDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGDAL 98 (333)
T ss_dssp CC--------CCEEEECTTCCEEEEEECCTTTT---CCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCSCB
T ss_pred eECCCCCCCceEEEEEcCCCCeEEEEECCCCCC---ccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCCcc
Confidence 3455554443 6676654467777776544321 223455666655532 23556676643333 78999998877
Q ss_pred HHHHHhc
Q 004275 742 LARALFG 748 (764)
Q Consensus 742 L~~~L~~ 748 (764)
+.+++..
T Consensus 99 l~~~l~~ 105 (333)
T 3csv_A 99 FTEVINN 105 (333)
T ss_dssp HHHHHHH
T ss_pred hHHHhcC
Confidence 8776653
No 445
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=35.75 E-value=46 Score=23.03 Aligned_cols=16 Identities=13% Similarity=0.295 Sum_probs=7.2
Q ss_pred ccceeehHhHHHHHHHH
Q 004275 600 LSAGAIVGIVAGSCAVV 616 (764)
Q Consensus 600 ~~~~~~~~i~~~~~~~~ 616 (764)
...+++.|+++ +++++
T Consensus 13 IA~gVVgGv~~-~~ii~ 28 (44)
T 2ks1_B 13 IATGMVGALLL-LLVVA 28 (44)
T ss_dssp STHHHHHHHHH-HHHHH
T ss_pred EEeehhHHHHH-HHHHH
Confidence 34444444544 33444
No 446
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=33.18 E-value=48 Score=23.99 Aligned_cols=26 Identities=19% Similarity=0.484 Sum_probs=10.6
Q ss_pred ceeehHhHHHHHHHHHHHHHHHhhhh
Q 004275 602 AGAIVGIVAGSCAVVIILLFILWRLG 627 (764)
Q Consensus 602 ~~~~~~i~~~~~~~~~~~~~~~~~~~ 627 (764)
.++++..+++.+++++++++++|+..
T Consensus 9 ~WiIi~svl~GLLLL~Lii~~LwK~G 34 (54)
T 2l8s_A 9 LWVILLSAFAGLLLLMLLILALWKIG 34 (54)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 33333333333333344444555433
No 447
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=30.13 E-value=53 Score=23.84 Aligned_cols=25 Identities=20% Similarity=0.410 Sum_probs=10.3
Q ss_pred ceeehHhHHHHHHHHHHHHHHHhhh
Q 004275 602 AGAIVGIVAGSCAVVIILLFILWRL 626 (764)
Q Consensus 602 ~~~~~~i~~~~~~~~~~~~~~~~~~ 626 (764)
.++++..+++.+++++++++++|++
T Consensus 12 ~wiIi~svl~GLllL~li~~~LwK~ 36 (54)
T 2knc_A 12 IWWVLVGVLGGLLLLTILVLAMWKV 36 (54)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 3444333333333344444445543
No 448
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=28.67 E-value=33 Score=23.11 Aligned_cols=8 Identities=25% Similarity=0.509 Sum_probs=3.1
Q ss_pred hHhHHHHH
Q 004275 606 VGIVAGSC 613 (764)
Q Consensus 606 ~~i~~~~~ 613 (764)
.++++|.+
T Consensus 17 ~~vv~Gv~ 24 (41)
T 2k9y_A 17 GGVAVGVV 24 (41)
T ss_dssp HHHHHHHH
T ss_pred eehhHHHH
Confidence 33344433
No 449
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=24.77 E-value=58 Score=34.23 Aligned_cols=73 Identities=21% Similarity=0.309 Sum_probs=43.4
Q ss_pred CeeeccCCeeEEEEEEcC--------CCEEEEEEcCCcChhcHHHHHHHHHHHHhCCCCCc-cceEEEEEECCEEEEEEc
Q 004275 665 NKIGEGGFGPVYKGTLSD--------GAVIAVKQLSSKSKQGNREFVNEIGMISALQHQNL-VKLYGCCIEGNQLLLVYE 735 (764)
Q Consensus 665 ~~iG~G~~g~Vy~~~~~~--------g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~ni-v~l~g~~~~~~~~~lv~E 735 (764)
+.+..|-...+|+...++ +..+.+|+-... ......+.+|.++++.+.-..+ .++++++. +. +|||
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~--~g--~v~e 130 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFP--EG--RLEQ 130 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEET--TE--EEEE
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcC--Cc--cEEE
Confidence 346667778889988642 467888886332 1234567789999887753333 45665543 32 9999
Q ss_pred ccCCCcH
Q 004275 736 YLENNSL 742 (764)
Q Consensus 736 y~~~GsL 742 (764)
|+++..+
T Consensus 131 ~i~G~~l 137 (379)
T 3feg_A 131 YIPSRPL 137 (379)
T ss_dssp CCSEEEC
T ss_pred EecCccC
Confidence 9997554
No 450
>2k1a_A Integrin alpha-IIB; single-PASS transmembrane segment, alternative splicing, calcium, cell adhesion, cleavage on PAIR of basic residues; NMR {Homo sapiens} PDB: 2k9j_A
Probab=23.38 E-value=1e+02 Score=21.10 Aligned_cols=26 Identities=23% Similarity=0.479 Sum_probs=10.9
Q ss_pred ceeehHhHHHHHHHHHHHHHHHhhhh
Q 004275 602 AGAIVGIVAGSCAVVIILLFILWRLG 627 (764)
Q Consensus 602 ~~~~~~i~~~~~~~~~~~~~~~~~~~ 627 (764)
.++++..+++.+++++++++++|+..
T Consensus 10 ~wiIi~s~l~GLllL~li~~~LwK~G 35 (42)
T 2k1a_A 10 IWWVLVGVLGGLLLLTILVLAMWKVG 35 (42)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 33333333333334444445555443
No 451
>2l34_A TYRO protein tyrosine kinase-binding protein; immunoreceptor, transmembrane assembly, DAP12, protein bindi; NMR {Homo sapiens} PDB: 2l35_B
Probab=22.81 E-value=66 Score=20.73 Aligned_cols=16 Identities=31% Similarity=0.721 Sum_probs=9.3
Q ss_pred ceeehHhHHHHHHHHH
Q 004275 602 AGAIVGIVAGSCAVVI 617 (764)
Q Consensus 602 ~~~~~~i~~~~~~~~~ 617 (764)
.+.+.|++++.++..+
T Consensus 6 ~gaIaGIVvgdi~~t~ 21 (33)
T 2l34_A 6 PGVLAGIVVGDLVLTV 21 (33)
T ss_dssp THHHHHHHHHHHHHHH
T ss_pred cceEEeEeHHHHHHHH
Confidence 4566777766654443
No 452
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=20.72 E-value=65 Score=33.36 Aligned_cols=72 Identities=10% Similarity=0.145 Sum_probs=42.3
Q ss_pred CeeeccCCeeEEEEEEcC---------CCEEEEEEcCCcChhcHHHHHHHHHHHHhCCCCCcc-ceEEEEEECCEEEEEE
Q 004275 665 NKIGEGGFGPVYKGTLSD---------GAVIAVKQLSSKSKQGNREFVNEIGMISALQHQNLV-KLYGCCIEGNQLLLVY 734 (764)
Q Consensus 665 ~~iG~G~~g~Vy~~~~~~---------g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv-~l~g~~~~~~~~~lv~ 734 (764)
..++.|....+|+....+ +..+.+|........ ..+..+|.+++..+....++ ++++.. . -++||
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~-~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~~v~ 113 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDE-LYNTISEFEVYKTMSKYKIAPQLLNTF--N--GGRIE 113 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGG-TSCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccc-eecHHHHHHHHHHHHhcCCCCceEEec--C--CcEEE
Confidence 456778888999988654 267888877543221 11235677777776533443 666443 2 26899
Q ss_pred cccCCCc
Q 004275 735 EYLENNS 741 (764)
Q Consensus 735 Ey~~~Gs 741 (764)
||+++-.
T Consensus 114 e~i~G~~ 120 (369)
T 3c5i_A 114 EWLYGDP 120 (369)
T ss_dssp ECCCSEE
T ss_pred EEecCCc
Confidence 9998754
Done!