Query         004275
Match_columns 764
No_of_seqs    775 out of 4900
Neff          8.8 
Searched_HMMs 13730
Date          Mon Mar 25 19:58:57 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004275.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/004275hhsearch_scop -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d1ogqa_ c.10.2.8 (A:) Polygala 100.0 5.3E-40 3.8E-44  348.4  18.1  300   29-367     3-312 (313)
  2 d1ogqa_ c.10.2.8 (A:) Polygala 100.0 4.2E-31 3.1E-35  279.4  13.2  244  109-378    50-302 (313)
  3 d1xkua_ c.10.2.7 (A:) Decorin   99.9 3.1E-23 2.3E-27  217.5  25.8  262   89-360    14-285 (305)
  4 d1ozna_ c.10.2.7 (A:) Reticulo  99.9 1.1E-23 7.9E-28  218.7  20.0  253   90-369    16-270 (284)
  5 d1xkua_ c.10.2.7 (A:) Decorin   99.9   1E-22 7.5E-27  213.5  24.9  273   69-348    11-296 (305)
  6 d1ozna_ c.10.2.7 (A:) Reticulo  99.9   8E-24 5.8E-28  219.7  16.1  206   86-315    33-239 (284)
  7 d2omza2 c.10.2.1 (A:33-416) In  99.9   4E-22 2.9E-26  215.4  25.4  259   86-364    45-368 (384)
  8 d2omza2 c.10.2.1 (A:33-416) In  99.9   1E-21 7.4E-26  212.2  23.5  255   85-357    66-383 (384)
  9 d1p9ag_ c.10.2.7 (G:) von Will  99.9 3.4E-21 2.5E-25  197.7  20.7  202  107-339     8-209 (266)
 10 d1p9ag_ c.10.2.7 (G:) von Will  99.9 5.5E-21   4E-25  196.1  19.6  197   87-314    12-208 (266)
 11 d1h6ua2 c.10.2.1 (A:36-262) In  99.7 6.5E-17 4.7E-21  161.1  17.4  187  131-333    39-225 (227)
 12 d1xwdc1 c.10.2.7 (C:18-259) Fo  99.7 1.8E-17 1.3E-21  166.8  12.5  219   89-334    12-234 (242)
 13 d1jl5a_ c.10.2.6 (A:) Leucine   99.7 1.2E-15 8.7E-20  161.5  27.1  249   86-362    39-339 (353)
 14 d1h6ua2 c.10.2.1 (A:36-262) In  99.7 6.9E-17   5E-21  160.9  16.3  205   88-310    22-226 (227)
 15 d1xwdc1 c.10.2.7 (C:18-259) Fo  99.7 6.7E-17 4.8E-21  162.5  14.9  225  112-364    11-240 (242)
 16 d1sm2a_ d.144.1.7 (A:) Tyrosin  99.7 4.3E-17 3.1E-21  166.2  10.0  105  659-764     5-124 (263)
 17 d1h6ta2 c.10.2.1 (A:31-240) In  99.7 3.1E-16 2.3E-20  154.0  14.7  164  108-309    45-208 (210)
 18 d1w8aa_ c.10.2.7 (A:) Slit {Fr  99.7   4E-17 2.9E-21  158.2   7.6  129   89-220    12-141 (192)
 19 d1h6ta2 c.10.2.1 (A:31-240) In  99.7 6.3E-16 4.6E-20  151.9  16.1  166  131-334    44-209 (210)
 20 d1w8aa_ c.10.2.7 (A:) Slit {Fr  99.7 1.6E-16 1.2E-20  153.8  11.4  129  112-243    11-140 (192)
 21 d1k2pa_ d.144.1.7 (A:) Bruton'  99.6 7.5E-17 5.5E-21  163.7   8.9  105  659-764     4-123 (258)
 22 d2omxa2 c.10.2.1 (A:37-235) In  99.6   1E-15 7.4E-20  149.0  15.9  144  107-262    38-181 (199)
 23 d1yhwa1 d.144.1.7 (A:249-541)   99.6 1.6E-16 1.1E-20  164.2   9.7  106  659-764    20-139 (293)
 24 d2jfla1 d.144.1.7 (A:21-308) S  99.6 1.3E-16 9.4E-21  164.6   8.5  106  659-764    12-133 (288)
 25 d1jpaa_ d.144.1.7 (A:) ephb2 r  99.6 1.1E-16 7.9E-21  166.2   7.8  105  660-764    27-151 (299)
 26 d2omxa2 c.10.2.1 (A:37-235) In  99.6 2.5E-15 1.8E-19  146.1  16.8  160   85-258    40-199 (199)
 27 d1koaa2 d.144.1.7 (A:5915-6264  99.6 3.3E-16 2.4E-20  165.9  11.0  107  658-764    25-147 (350)
 28 d1nvra_ d.144.1.7 (A:) Cell cy  99.6 1.2E-16 8.9E-21  163.1   5.8  106  659-764     5-126 (271)
 29 d1opja_ d.144.1.7 (A:) Abelson  99.6 1.5E-16 1.1E-20  164.1   6.5  110  654-764    12-138 (287)
 30 d1jksa_ d.144.1.7 (A:) Death-a  99.6 3.4E-16 2.5E-20  162.1   9.2  107  658-764     9-136 (293)
 31 d1qpca_ d.144.1.7 (A:) Lymphoc  99.6 1.2E-16 8.9E-21  163.6   5.4  105  658-764    12-132 (272)
 32 d1u59a_ d.144.1.7 (A:) Tyrosin  99.6 6.1E-16 4.4E-20  159.2  10.3  105  659-764     8-132 (285)
 33 d2j4za1 d.144.1.7 (A:126-388)   99.6 3.3E-16 2.4E-20  159.3   7.8  106  659-764     6-129 (263)
 34 d1jl5a_ c.10.2.6 (A:) Leucine   99.6 1.2E-13 8.4E-18  145.9  27.5  246  109-378    38-335 (353)
 35 d1uwha_ d.144.1.7 (A:) B-Raf k  99.6 2.6E-16 1.9E-20  161.3   6.1  104  658-764     7-127 (276)
 36 d1s9ja_ d.144.1.7 (A:) Dual sp  99.6 2.5E-16 1.8E-20  165.4   5.9  107  658-764     5-128 (322)
 37 d1koba_ d.144.1.7 (A:) Twitchi  99.6 7.9E-16 5.8E-20  163.1   9.7  106  659-764    29-150 (352)
 38 d1a06a_ d.144.1.7 (A:) Calmodu  99.6 5.9E-16 4.3E-20  161.1   8.1  107  658-764     8-130 (307)
 39 d1tkia_ d.144.1.7 (A:) Titin,   99.6 1.6E-15 1.2E-19  158.9  11.1  106  658-764     4-125 (321)
 40 d1uu3a_ d.144.1.7 (A:) 3-phosp  99.6 4.9E-16 3.6E-20  160.1   6.6  106  659-764     8-131 (288)
 41 d1xbba_ d.144.1.7 (A:) Tyrosin  99.6 1.4E-15 1.1E-19  155.8   9.5   99  665-764    13-130 (277)
 42 d1fmka3 d.144.1.7 (A:249-533)   99.6 6.1E-16 4.5E-20  159.1   6.4   90  658-749    16-105 (285)
 43 d1u5ra_ d.144.1.7 (A:) Serine/  99.6 1.4E-15   1E-19  158.3   8.4  105  660-764    16-138 (309)
 44 d1phka_ d.144.1.7 (A:) gamma-s  99.6 1.5E-15 1.1E-19  155.5   8.3  106  659-764     3-133 (277)
 45 d1t4ha_ d.144.1.7 (A:) Protein  99.6   2E-15 1.4E-19  154.1   8.6  103  662-764    12-137 (270)
 46 d1byga_ d.144.1.7 (A:) Carboxy  99.5 8.1E-16 5.9E-20  156.2   4.7  103  659-764     7-126 (262)
 47 d1mqba_ d.144.1.7 (A:) epha2 r  99.5 4.1E-15   3E-19  153.0   9.8  106  659-764     7-133 (283)
 48 d1o6la_ d.144.1.7 (A:) Pkb kin  99.5 2.3E-15 1.7E-19  158.4   7.7  106  659-764     5-128 (337)
 49 d1lufa_ d.144.1.7 (A:) Musk ty  99.5 2.1E-15 1.6E-19  156.7   6.8   97  652-748     6-109 (301)
 50 d1fota_ d.144.1.7 (A:) cAMP-de  99.5 3.5E-15 2.6E-19  155.8   7.5  106  659-764     4-127 (316)
 51 d1r0pa_ d.144.1.7 (A:) Hepatoc  99.5 1.4E-14 9.9E-19  150.9  11.6  101  664-764    32-153 (311)
 52 d1rjba_ d.144.1.7 (A:) Fl cyto  99.5 5.4E-15   4E-19  155.2   8.3   92  658-749    36-135 (325)
 53 d2java1 d.144.1.7 (A:3-271) Se  99.5 4.7E-15 3.4E-19  151.1   7.4   90  659-748     4-98  (269)
 54 d1xjda_ d.144.1.7 (A:) Protein  99.5 4.6E-15 3.4E-19  155.1   7.4  106  659-764     2-126 (320)
 55 d1fvra_ d.144.1.7 (A:) Tie2 ki  99.5 1.1E-14 8.2E-19  151.7  10.1   91  659-749    10-105 (309)
 56 d1o6ya_ d.144.1.7 (A:) Mycobac  99.5 5.9E-15 4.3E-19  151.4   7.6  107  658-764     6-134 (277)
 57 d2astb2 c.10.1.3 (B:2136-2419)  99.5   2E-15 1.5E-19  155.5   3.1  208  155-363    44-262 (284)
 58 d1mp8a_ d.144.1.7 (A:) Focal a  99.5   1E-14 7.3E-19  149.3   7.1  106  658-764     6-131 (273)
 59 d1p4oa_ d.144.1.7 (A:) Insulin  99.5 3.2E-15 2.3E-19  155.8   3.1   92  657-748    18-116 (308)
 60 d1t46a_ d.144.1.7 (A:) c-KIT r  99.5 6.4E-15 4.7E-19  153.7   5.4   92  658-749    22-121 (311)
 61 d1xkka_ d.144.1.7 (A:) EGF rec  99.5 3.6E-14 2.6E-18  148.3   9.5  105  659-764     9-134 (317)
 62 d1z7xw1 c.10.1.1 (W:1-460) Rib  99.5 1.2E-15 8.6E-20  167.4  -2.3  276   86-361     3-411 (460)
 63 d1gz8a_ d.144.1.7 (A:) Cyclin-  99.5 4.1E-14   3E-18  146.6   9.5  105  659-764     2-125 (298)
 64 d1u46a_ d.144.1.7 (A:) Activat  99.5 1.4E-14 9.9E-19  148.1   5.6  105  659-764     8-134 (273)
 65 d1omwa3 d.144.1.7 (A:186-549)   99.5 2.3E-14 1.7E-18  152.4   7.2  106  659-764     4-130 (364)
 66 d1ob3a_ d.144.1.7 (A:) Cyclin-  99.5 3.9E-14 2.9E-18  145.8   8.7  106  659-764     2-123 (286)
 67 d1dcea3 c.10.2.2 (A:444-567) R  99.4 1.7E-13 1.3E-17  121.8  11.4  102  112-218     1-103 (124)
 68 d1rdqe_ d.144.1.7 (E:) cAMP-de  99.4 2.8E-14   2E-18  151.0   7.1  106  659-764    41-164 (350)
 69 d1ua2a_ d.144.1.7 (A:) Cell di  99.4   3E-14 2.2E-18  147.7   6.7  101  664-764     3-123 (299)
 70 d1a9na_ c.10.2.4 (A:) Spliceso  99.4 6.5E-14 4.7E-18  131.0   8.0  111  105-218    14-125 (162)
 71 d2ozaa1 d.144.1.7 (A:51-385) M  99.4   1E-13 7.5E-18  145.7   9.8  102  658-764    10-134 (335)
 72 d1a9na_ c.10.2.4 (A:) Spliceso  99.4 9.7E-14 7.1E-18  129.7   8.4  130  128-260    13-146 (162)
 73 d1vjya_ d.144.1.7 (A:) Type I   99.4 1.1E-13 8.4E-18  143.4   9.5   95  659-760     3-103 (303)
 74 d1dcea3 c.10.2.2 (A:444-567) R  99.4   4E-13 2.9E-17  119.4  11.6  118  136-258     1-122 (124)
 75 d1fgka_ d.144.1.7 (A:) Fibrobl  99.4 1.5E-13 1.1E-17  142.3   8.9   92  658-749    12-113 (299)
 76 d2astb2 c.10.1.3 (B:2136-2419)  99.4 1.6E-14 1.2E-18  148.5   0.8  212  106-343    43-264 (284)
 77 d1unla_ d.144.1.7 (A:) Cyclin-  99.4 1.9E-13 1.4E-17  141.0   8.8  106  659-764     2-124 (292)
 78 d2ca6a1 c.10.1.2 (A:2-345) Rna  99.4 1.2E-14 8.9E-19  153.9  -2.4  250  102-362    24-317 (344)
 79 d1z7xw1 c.10.1.1 (W:1-460) Rib  99.4 1.4E-14   1E-18  158.6  -2.5  253  110-362     3-384 (460)
 80 d2ca6a1 c.10.1.2 (A:2-345) Rna  99.3 9.4E-14 6.9E-18  146.9   3.3  217  125-361    23-287 (344)
 81 d1ywna1 d.144.1.7 (A:818-1166)  99.3 3.8E-13 2.7E-17  139.3   7.5   94  656-749    10-112 (299)
 82 d3bqca1 d.144.1.7 (A:3-330) Pr  99.3   3E-13 2.2E-17  142.0   5.7  103  659-764    35-152 (328)
 83 d2gfsa1 d.144.1.7 (A:5-352) MA  99.3 4.1E-13   3E-17  142.2   5.9  107  658-764    17-144 (348)
 84 d1xwsa_ d.144.1.7 (A:) Proto-o  99.3 1.9E-13 1.4E-17  139.5   3.2  106  659-764     4-133 (273)
 85 d1cm8a_ d.144.1.7 (A:) MAP kin  99.3 6.5E-13 4.7E-17  140.5   7.1  106  658-764    17-144 (346)
 86 d1vzoa_ d.144.1.7 (A:) Ribosom  99.3 3.8E-13 2.8E-17  140.6   5.1  106  659-764    24-152 (322)
 87 d1pmea_ d.144.1.7 (A:) MAP kin  99.3 7.4E-13 5.4E-17  139.9   6.8  107  658-764     7-132 (345)
 88 d3blha1 d.144.1.7 (A:8-325) Ce  99.3 1.2E-12 8.8E-17  136.6   6.8  107  658-764     9-140 (318)
 89 d2b1pa1 d.144.1.7 (A:46-400) c  99.3 1.3E-12 9.6E-17  138.5   7.1  105  659-764    17-142 (355)
 90 d1q5ka_ d.144.1.7 (A:) Glycoge  99.3 1.7E-12 1.2E-16  137.4   7.1  101  660-764    21-145 (350)
 91 d1m9la_ c.10.3.1 (A:) Outer ar  99.2 1.2E-13 9.1E-18  133.6  -3.1  130  125-259    40-180 (198)
 92 d1blxa_ d.144.1.7 (A:) Cyclin-  99.2 1.1E-11 7.9E-16  128.4   7.8  107  658-764     6-139 (305)
 93 d1csna_ d.144.1.7 (A:) Casein   99.2 1.7E-11 1.2E-15  126.2   9.0  103  659-764     5-124 (293)
 94 d1m9la_ c.10.3.1 (A:) Outer ar  99.2   1E-13 7.6E-18  134.2  -7.8  130  101-235    40-180 (198)
 95 d2ifga3 c.10.2.7 (A:36-191) Hi  99.1 4.3E-11 3.2E-15  110.6   8.9  103   90-194    13-116 (156)
 96 d1ckia_ d.144.1.7 (A:) Casein   99.1 5.7E-11 4.2E-15  122.5   8.1  103  659-764     7-126 (299)
 97 d2ifga3 c.10.2.7 (A:36-191) Hi  99.1 3.1E-10 2.3E-14  104.7  11.1   69  150-218    24-93  (156)
 98 d1zara2 d.144.1.9 (A:91-281) R  98.6 8.5E-09 6.2E-13   98.3   4.6   98  663-764     4-126 (191)
 99 d1q8ya_ d.144.1.7 (A:) Sky1p {  98.5 7.2E-08 5.2E-12  101.4   7.3  104  660-764    14-149 (362)
100 d1koha1 c.10.2.3 (A:201-362) m  98.1 5.2E-08 3.8E-12   90.0  -3.5   69  126-194    58-128 (162)
101 d1koha1 c.10.2.3 (A:201-362) m  98.0 1.2E-07 8.9E-12   87.4  -2.9   65  107-171    63-129 (162)
102 d1pgva_ c.10.1.1 (A:) Tropomod  97.2 6.2E-05 4.5E-09   68.9   3.3   87  107-193    13-112 (167)
103 d1pgva_ c.10.1.1 (A:) Tropomod  97.0 0.00016 1.1E-08   66.1   3.9   59  204-262    71-140 (167)
104 d1io0a_ c.10.1.1 (A:) Tropomod  96.2 0.00044 3.2E-08   62.9   0.5   64  107-170    15-87  (166)
105 d1io0a_ c.10.1.1 (A:) Tropomod  95.9 0.00036 2.6E-08   63.5  -1.5   66  129-194    13-87  (166)
106 d1j7la_ d.144.1.6 (A:) Type II  91.7    0.23 1.7E-05   47.2   8.9   92  653-745     8-100 (263)
107 d1nd4a_ d.144.1.6 (A:) Aminogl  77.8     1.9 0.00014   40.1   7.2   74  666-742    17-93  (255)
108 d2pula1 d.144.1.6 (A:5-396) Me  50.4      12 0.00085   37.2   6.9   76  665-742    32-118 (392)
109 d1zyla1 d.144.1.6 (A:4-328) Rd  33.6      10 0.00074   36.5   3.1   68  673-741    36-110 (325)

No 1  
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=100.00  E-value=5.3e-40  Score=348.44  Aligned_cols=300  Identities=27%  Similarity=0.399  Sum_probs=237.1

Q ss_pred             CChhHHHHHHHHHHhcCC----CCCCCCCCCCCCCCCcccccCCCCCceeccCCCCCCceeeEEEEEcCCCcccc--cCC
Q 004275           29 LPDDEVQTLQSIFRKLNF----RNGQVNQTSCTEGSWNVTIDDSNGSNFTCDCTYSNNTVCHVTVILLKGFNLAG--VIP  102 (764)
Q Consensus        29 ~~~~e~~aL~~~~~~~~~----~~w~~~~~~C~~~~~~~~~~~~~~~gv~C~~~~~~~~~~~v~~L~L~~~~l~g--~~p  102 (764)
                      |.|+|++||++||+++.+    ++|..++|||...          |.||+|+.   .....||+.|+|+++++.|  .+|
T Consensus         3 c~~~e~~aLl~~k~~~~~~~~l~sW~~~~d~C~~~----------w~gv~C~~---~~~~~~v~~L~L~~~~l~g~~~lp   69 (313)
T d1ogqa_           3 CNPQDKQALLQIKKDLGNPTTLSSWLPTTDCCNRT----------WLGVLCDT---DTQTYRVNNLDLSGLNLPKPYPIP   69 (313)
T ss_dssp             SCHHHHHHHHHHHHHTTCCGGGTTCCTTSCTTTTC----------STTEEECC---SSSCCCEEEEEEECCCCSSCEECC
T ss_pred             CCHHHHHHHHHHHHHCCCCCcCCCCCCCCCCCCCc----------CCCeEEeC---CCCcEEEEEEECCCCCCCCCCCCC
Confidence            789999999999999975    6798788999532          99999974   2345689999999999988  589


Q ss_pred             ccCCCCCCCCEEEccC-CcCCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEeeCCcCCCCCCccCCCCC
Q 004275          103 EEFGNLTFLQEVDLSR-NYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVLEDNQLVGPLPENLGNLK  181 (764)
Q Consensus       103 ~~l~~L~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~  181 (764)
                      +++++|++|++|||++ |+++|.+|.+|++|++|++|+|++|++.+..|..+..+.+|+.++++.|.+.+.+|..+.+++
T Consensus        70 ~~l~~L~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~l~~N~~~~~~p~~l~~l~  149 (313)
T d1ogqa_          70 SSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLP  149 (313)
T ss_dssp             GGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCT
T ss_pred             hHHhcCccccccccccccccccccccccccccccchhhhccccccccccccccchhhhcccccccccccccCchhhccCc
Confidence            9999999999999986 899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCcEEEccCccCCCCCcccccCCCCC-cEEEccCccCCCcCcccccCCCCCCEEeeeCCcCCCCCccchhcCCCCCEEEc
Q 004275          182 SLRRILLSSNNFTGSIPESYGNLKNL-TEFRIDGSNLTGRIPNFIGNWTKLDRLDLQGTSLEGPIPSTISQLKNLTELRI  260 (764)
Q Consensus       182 ~L~~L~Ls~N~l~~~~p~~~~~l~~L-~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L  260 (764)
                      +|+++++++|.+.+.+|..+..+.++ +.++++.|++++..|..+..+..+ .++++.+.+.+.+|..+..+++|+.+++
T Consensus       150 ~L~~l~l~~n~l~~~ip~~~~~l~~l~~~l~~~~n~l~~~~~~~~~~l~~~-~l~l~~~~~~~~~~~~~~~~~~l~~l~~  228 (313)
T d1ogqa_         150 NLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLA-FVDLSRNMLEGDASVLFGSDKNTQKIHL  228 (313)
T ss_dssp             TCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCS-EEECCSSEEEECCGGGCCTTSCCSEEEC
T ss_pred             ccceeeccccccccccccccccccccccccccccccccccccccccccccc-cccccccccccccccccccccccccccc
Confidence            99999999999999999999888876 789999999999888888877554 7899999888888888777777777766


Q ss_pred             CCCCCCCCCCCCccCCccccccccccccccccCCccccCCCCCCEEeccCCCCCCCccccccCCCCCCEEeccCCcCcCC
Q 004275          261 SDLKGSSSSFPNLQDMKKMERLILRNCLITGRIPEYIEDMTDLKILDLSFNQLTGPVPGILQNLKKIDYIFLTNNSLSGT  340 (764)
Q Consensus       261 ~~n~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~  340 (764)
                      +++                        .+++.+| .+..+++|+.|++++|+++|.+|..++++++|++|+|++|+|+|.
T Consensus       229 ~~~------------------------~l~~~~~-~~~~~~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~Ls~N~l~g~  283 (313)
T d1ogqa_         229 AKN------------------------SLAFDLG-KVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGE  283 (313)
T ss_dssp             CSS------------------------EECCBGG-GCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEE
T ss_pred             ccc------------------------ccccccc-ccccccccccccCccCeecccCChHHhCCCCCCEEECcCCccccc
Confidence            653                        3333332 344455555666666666555555555666666666666666655


Q ss_pred             CChhh-hcCCCeEEeecCc-CCCCCCccc
Q 004275          341 LPDWI-LTSEKNLDLSYNN-FTESSPATC  367 (764)
Q Consensus       341 ~p~~~-~~~l~~L~Ls~N~-l~~~~p~~~  367 (764)
                      +|+.. +..++.+++++|+ +.|.|...|
T Consensus       284 iP~~~~L~~L~~l~l~~N~~l~g~plp~c  312 (313)
T d1ogqa_         284 IPQGGNLQRFDVSAYANNKCLCGSPLPAC  312 (313)
T ss_dssp             CCCSTTGGGSCGGGTCSSSEEESTTSSCC
T ss_pred             CCCcccCCCCCHHHhCCCccccCCCCCCC
Confidence            55432 3445556666665 455433344


No 2  
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.97  E-value=4.2e-31  Score=279.37  Aligned_cols=244  Identities=27%  Similarity=0.410  Sum_probs=213.6

Q ss_pred             CCCCEEEccCCcCCc--cCchhhhcCCCCcEEeccc-CcCcccCCcCcCCCCCCCEEEeeCCcCCCCCCccCCCCCCCcE
Q 004275          109 TFLQEVDLSRNYFNG--SLPKSFARLQNLTKLLILG-NRLSGSIPLEIGDISTLEELVLEDNQLVGPLPENLGNLKSLRR  185 (764)
Q Consensus       109 ~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~-n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~  185 (764)
                      .+++.|||++|.+.|  .+|+++++|++|++|+|++ |+++|.+|.+|++|++|++|+|++|++.+..+..+..+.+|++
T Consensus        50 ~~v~~L~L~~~~l~g~~~lp~~l~~L~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~  129 (313)
T d1ogqa_          50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT  129 (313)
T ss_dssp             CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred             EEEEEEECCCCCCCCCCCCChHHhcCccccccccccccccccccccccccccccchhhhccccccccccccccchhhhcc
Confidence            478899999999988  5889999999999999997 8999999999999999999999999999989988999999999


Q ss_pred             EEccCccCCCCCcccccCCCCCcEEEccCccCCCcCcccccCCCCC-CEEeeeCCcCCCCCccchhcCCCCCEEEcCCCC
Q 004275          186 ILLSSNNFTGSIPESYGNLKNLTEFRIDGSNLTGRIPNFIGNWTKL-DRLDLQGTSLEGPIPSTISQLKNLTELRISDLK  264 (764)
Q Consensus       186 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L-~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~n~  264 (764)
                      ++++.|.+.+.+|..+.++++|+.+++++|.+++.+|..+..+.++ +.+++++|++++..|..+..+..          
T Consensus       130 l~l~~N~~~~~~p~~l~~l~~L~~l~l~~n~l~~~ip~~~~~l~~l~~~l~~~~n~l~~~~~~~~~~l~~----------  199 (313)
T d1ogqa_         130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNL----------  199 (313)
T ss_dssp             EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCC----------
T ss_pred             cccccccccccCchhhccCcccceeecccccccccccccccccccccccccccccccccccccccccccc----------
Confidence            9999999999999999999999999999999999999999888876 88999999999888877655432          


Q ss_pred             CCCCCCCCccCCccccccccccccccccCCccccCCCCCCEEeccCCCCCCCccccccCCCCCCEEeccCCcCcCCCChh
Q 004275          265 GSSSSFPNLQDMKKMERLILRNCLITGRIPEYIEDMTDLKILDLSFNQLTGPVPGILQNLKKIDYIFLTNNSLSGTLPDW  344 (764)
Q Consensus       265 ~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~  344 (764)
                                     ..++++++.+.+.+|..+..+++|+.+++++|.+++.+| .+..+++|+.|+|++|+++|.+|++
T Consensus       200 ---------------~~l~l~~~~~~~~~~~~~~~~~~l~~l~~~~~~l~~~~~-~~~~~~~L~~L~Ls~N~l~g~iP~~  263 (313)
T d1ogqa_         200 ---------------AFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLG-KVGLSKNLNGLDLRNNRIYGTLPQG  263 (313)
T ss_dssp             ---------------SEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGG-GCCCCTTCCEEECCSSCCEECCCGG
T ss_pred             ---------------ccccccccccccccccccccccccccccccccccccccc-ccccccccccccCccCeecccCChH
Confidence                           235566677888899999999999999999999998765 5788999999999999999999998


Q ss_pred             h--hcCCCeEEeecCcCCCCCCccc--ccc-cceeeccc
Q 004275          345 I--LTSEKNLDLSYNNFTESSPATC--RES-RVNILSSF  378 (764)
Q Consensus       345 ~--~~~l~~L~Ls~N~l~~~~p~~~--~~~-~l~~~~~~  378 (764)
                      +  ++.+++|||++|+|+|.+|+..  ..+ .+.+.+|.
T Consensus       264 l~~L~~L~~L~Ls~N~l~g~iP~~~~L~~L~~l~l~~N~  302 (313)
T d1ogqa_         264 LTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNK  302 (313)
T ss_dssp             GGGCTTCCEEECCSSEEEEECCCSTTGGGSCGGGTCSSS
T ss_pred             HhCCCCCCEEECcCCcccccCCCcccCCCCCHHHhCCCc
Confidence            8  5678899999999999988753  333 34455553


No 3  
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.91  E-value=3.1e-23  Score=217.49  Aligned_cols=262  Identities=24%  Similarity=0.330  Sum_probs=211.4

Q ss_pred             EEEcCCCcccccCCccCCCCCCCCEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEeeCCc
Q 004275           89 VILLKGFNLAGVIPEEFGNLTFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVLEDNQ  168 (764)
Q Consensus        89 ~L~L~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~  168 (764)
                      .++-++.+++ .+|..+.  +.+++|||++|+++...+.+|.++++|++|++++|.+....|..|.++++|++|++++|+
T Consensus        14 ~~~C~~~~L~-~lP~~l~--~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~~n~   90 (305)
T d1xkua_          14 VVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQ   90 (305)
T ss_dssp             EEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSC
T ss_pred             EEEecCCCCC-ccCCCCC--CCCCEEECcCCcCCCcChhHhhccccccccccccccccccchhhhhCCCccCEecccCCc
Confidence            3444555665 4566664  679999999999986656689999999999999999997778889999999999999999


Q ss_pred             CCCCCCccCCCCCCCcEEEccCccCCCCCcccccCCCCCcEEEccCccCC--CcCcccccCCCCCCEEeeeCCcCCCCCc
Q 004275          169 LVGPLPENLGNLKSLRRILLSSNNFTGSIPESYGNLKNLTEFRIDGSNLT--GRIPNFIGNWTKLDRLDLQGTSLEGPIP  246 (764)
Q Consensus       169 l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~--~~~p~~~~~l~~L~~L~L~~N~l~~~~p  246 (764)
                      ++ .+|..+  ...|+.|++..|.+.+..+..+.....+..++...|...  ...+..+..+++|+.+++++|.++. +|
T Consensus        91 l~-~l~~~~--~~~l~~L~~~~n~l~~l~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~l~~L~~l~l~~n~l~~-l~  166 (305)
T d1xkua_          91 LK-ELPEKM--PKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT-IP  166 (305)
T ss_dssp             CS-BCCSSC--CTTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS-CC
T ss_pred             cC-cCccch--hhhhhhhhccccchhhhhhhhhhccccccccccccccccccCCCccccccccccCccccccCCccc-cC
Confidence            88 455543  367899999999998777777888888888988877543  3445678888999999999999874 45


Q ss_pred             cchhcCCCCCEEEcCCCCCCCCCCCCccCCccccccccccccccccCCccccCCCCCCEEeccCCCCCCCccccccCCCC
Q 004275          247 STISQLKNLTELRISDLKGSSSSFPNLQDMKKMERLILRNCLITGRIPEYIEDMTDLKILDLSFNQLTGPVPGILQNLKK  326 (764)
Q Consensus       247 ~~l~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~  326 (764)
                      ..+  +++|+.|++++|.........+..++.++.|++++|.+++..+..+..+++|++|+|++|+|+ .+|..+..+++
T Consensus       167 ~~~--~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~s~n~l~~~~~~~~~~l~~L~~L~L~~N~L~-~lp~~l~~l~~  243 (305)
T d1xkua_         167 QGL--PPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKY  243 (305)
T ss_dssp             SSC--CTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSS
T ss_pred             ccc--CCccCEEECCCCcCCCCChhHhhccccccccccccccccccccccccccccceeeeccccccc-ccccccccccC
Confidence            433  678999999987766555556888899999999999999888888999999999999999998 67888999999


Q ss_pred             CCEEeccCCcCcCCCChhh--------hcCCCeEEeecCcCC
Q 004275          327 IDYIFLTNNSLSGTLPDWI--------LTSEKNLDLSYNNFT  360 (764)
Q Consensus       327 L~~L~L~~N~l~g~~p~~~--------~~~l~~L~Ls~N~l~  360 (764)
                      |++|++++|+|+..-...+        ...++.|+|++|+++
T Consensus       244 L~~L~Ls~N~i~~i~~~~f~~~~~~~~~~~L~~L~L~~N~~~  285 (305)
T d1xkua_         244 IQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQ  285 (305)
T ss_dssp             CCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSC
T ss_pred             CCEEECCCCccCccChhhccCcchhcccCCCCEEECCCCcCc
Confidence            9999999999984322222        234678999999886


No 4  
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.91  E-value=1.1e-23  Score=218.73  Aligned_cols=253  Identities=19%  Similarity=0.199  Sum_probs=190.2

Q ss_pred             EEcCCCcccccCCccCCCCCCCCEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEee-CCc
Q 004275           90 ILLKGFNLAGVIPEEFGNLTFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVLE-DNQ  168 (764)
Q Consensus        90 L~L~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls-~N~  168 (764)
                      ++.++.+++ .+|..+.  +.+++|+|++|+|+...+..|.++++|++|++++|.+....+..+..+..++.++.. .|.
T Consensus        16 v~c~~~~L~-~iP~~ip--~~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~~   92 (284)
T d1ozna_          16 TSCPQQGLQ-AVPVGIP--AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQ   92 (284)
T ss_dssp             EECCSSCCS-SCCTTCC--TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTT
T ss_pred             EEcCCCCCC-ccCCCCC--CCCCEEECcCCcCCCCCHHHhhccccccccccccccccccccccccccccccccccccccc
Confidence            356666666 5566554  568999999999987666778999999999999999988777788888888888764 455


Q ss_pred             CCCCCCccCCCCCCCcEEEccCccCCCCCcccccCCCCCcEEEccCccCCCcCcccccCCCCCCEEeeeCCcCCCCCccc
Q 004275          169 LVGPLPENLGNLKSLRRILLSSNNFTGSIPESYGNLKNLTEFRIDGSNLTGRIPNFIGNWTKLDRLDLQGTSLEGPIPST  248 (764)
Q Consensus       169 l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~  248 (764)
                      +....|..|.++++|++|++++|.+....+..+..+.+|+.+++++|++++..+..|..+++|+.|++++|++++..+..
T Consensus        93 ~~~l~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~N~l~~l~~~~  172 (284)
T d1ozna_          93 LRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERA  172 (284)
T ss_dssp             CCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTT
T ss_pred             cccccchhhcccccCCEEecCCcccccccccccchhcccchhhhccccccccChhHhccccchhhcccccCcccccchhh
Confidence            66555777888888888888888887666667777777788888777777665666777777777777777776554544


Q ss_pred             hhcCCCCCEEEcCCCCCCCCCCCCccCCccccccccccccccccCCccccCCCCCCEEeccCCCCCCCccccccCCCCCC
Q 004275          249 ISQLKNLTELRISDLKGSSSSFPNLQDMKKMERLILRNCLITGRIPEYIEDMTDLKILDLSFNQLTGPVPGILQNLKKID  328 (764)
Q Consensus       249 l~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~  328 (764)
                      |..                        +++|+++++++|++++..|..|..+++|++|++++|++++..|..|..+++|+
T Consensus       173 f~~------------------------l~~L~~l~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~  228 (284)
T d1ozna_         173 FRG------------------------LHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQ  228 (284)
T ss_dssp             TTT------------------------CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCC
T ss_pred             hcc------------------------ccccchhhhhhccccccChhHhhhhhhcccccccccccccccccccccccccC
Confidence            444                        45555666666777778888899999999999999999988888999999999


Q ss_pred             EEeccCCcCcCCCCh-hhhcCCCeEEeecCcCCCCCCccccc
Q 004275          329 YIFLTNNSLSGTLPD-WILTSEKNLDLSYNNFTESSPATCRE  369 (764)
Q Consensus       329 ~L~L~~N~l~g~~p~-~~~~~l~~L~Ls~N~l~~~~p~~~~~  369 (764)
                      +|++++|++.+..+. ++...++.+....++++...|...+.
T Consensus       229 ~L~l~~N~l~C~C~~~~l~~~l~~~~~~~~~~~C~~p~~l~g  270 (284)
T d1ozna_         229 YLRLNDNPWVCDCRARPLWAWLQKFRGSSSEVPCSLPQRLAG  270 (284)
T ss_dssp             EEECCSSCEECSGGGHHHHHHHHHCCSEECCCBEEESGGGTT
T ss_pred             EEEecCCCCCCCccchHHHHHHHhCcCCCCceEeCCchHHcC
Confidence            999999999876553 33333445566667777666655443


No 5  
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.90  E-value=1e-22  Score=213.49  Aligned_cols=273  Identities=20%  Similarity=0.254  Sum_probs=225.6

Q ss_pred             CCCceeccCCCC----CCceeeEEEEEcCCCcccccCCccCCCCCCCCEEEccCCcCCccCchhhhcCCCCcEEecccCc
Q 004275           69 NGSNFTCDCTYS----NNTVCHVTVILLKGFNLAGVIPEEFGNLTFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNR  144 (764)
Q Consensus        69 ~~~gv~C~~~~~----~~~~~~v~~L~L~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~  144 (764)
                      .|..|.|....-    .+-...++.|+|++|+++...+.+|.++++|++|++++|.+....|..|.++++|++|++++|+
T Consensus        11 ~~~~~~C~~~~L~~lP~~l~~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~~n~   90 (305)
T d1xkua_          11 HLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQ   90 (305)
T ss_dssp             ETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSC
T ss_pred             cCCEEEecCCCCCccCCCCCCCCCEEECcCCcCCCcChhHhhccccccccccccccccccchhhhhCCCccCEecccCCc
Confidence            477888864211    1112468999999999987777789999999999999999998888999999999999999999


Q ss_pred             CcccCCcCcCCCCCCCEEEeeCCcCCCCCCccCCCCCCCcEEEccCccCC--CCCcccccCCCCCcEEEccCccCCCcCc
Q 004275          145 LSGSIPLEIGDISTLEELVLEDNQLVGPLPENLGNLKSLRRILLSSNNFT--GSIPESYGNLKNLTEFRIDGSNLTGRIP  222 (764)
Q Consensus       145 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~--~~~p~~~~~l~~L~~L~L~~n~l~~~~p  222 (764)
                      ++ .+|..+  ...|+.|++++|.+.+..+..+.....++.++...|...  ...+..+..+++|+.+++++|.++. +|
T Consensus        91 l~-~l~~~~--~~~l~~L~~~~n~l~~l~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~l~~L~~l~l~~n~l~~-l~  166 (305)
T d1xkua_          91 LK-ELPEKM--PKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT-IP  166 (305)
T ss_dssp             CS-BCCSSC--CTTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS-CC
T ss_pred             cC-cCccch--hhhhhhhhccccchhhhhhhhhhccccccccccccccccccCCCccccccccccCccccccCCccc-cC
Confidence            98 566554  468999999999998766666778888999999888653  3456678899999999999999874 55


Q ss_pred             ccccCCCCCCEEeeeCCcCCCCCccchhcCCCCCEEEcCCCCCCCCCCCCccCCccccccccccccccccCCccccCCCC
Q 004275          223 NFIGNWTKLDRLDLQGTSLEGPIPSTISQLKNLTELRISDLKGSSSSFPNLQDMKKMERLILRNCLITGRIPEYIEDMTD  302 (764)
Q Consensus       223 ~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~  302 (764)
                      ..+  +++|+.|++++|..++..+..+..++.++.|++++|.+.......+..+++|++|+|++|+++ .+|.++..+++
T Consensus       167 ~~~--~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~s~n~l~~~~~~~~~~l~~L~~L~L~~N~L~-~lp~~l~~l~~  243 (305)
T d1xkua_         167 QGL--PPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKY  243 (305)
T ss_dssp             SSC--CTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSS
T ss_pred             ccc--CCccCEEECCCCcCCCCChhHhhccccccccccccccccccccccccccccceeeeccccccc-ccccccccccC
Confidence            443  589999999999999999999999999999999998777666666889999999999999998 67889999999


Q ss_pred             CCEEeccCCCCCCCcccc------ccCCCCCCEEeccCCcCc-CCCChhhhcC
Q 004275          303 LKILDLSFNQLTGPVPGI------LQNLKKIDYIFLTNNSLS-GTLPDWILTS  348 (764)
Q Consensus       303 L~~L~Ls~N~l~g~~p~~------~~~l~~L~~L~L~~N~l~-g~~p~~~~~~  348 (764)
                      |++|++++|+|+......      ...+.+|+.|+|++|++. ..++...++.
T Consensus       244 L~~L~Ls~N~i~~i~~~~f~~~~~~~~~~~L~~L~L~~N~~~~~~~~~~~f~~  296 (305)
T d1xkua_         244 IQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRC  296 (305)
T ss_dssp             CCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTT
T ss_pred             CCEEECCCCccCccChhhccCcchhcccCCCCEEECCCCcCccCcCCHhHhcc
Confidence            999999999999643333      346788999999999985 4555544443


No 6  
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.90  E-value=8e-24  Score=219.74  Aligned_cols=206  Identities=20%  Similarity=0.232  Sum_probs=174.7

Q ss_pred             eEEEEEcCCCcccccCCccCCCCCCCCEEEccCCcCCccCchhhhcCCCCcEEecc-cCcCcccCCcCcCCCCCCCEEEe
Q 004275           86 HVTVILLKGFNLAGVIPEEFGNLTFLQEVDLSRNYFNGSLPKSFARLQNLTKLLIL-GNRLSGSIPLEIGDISTLEELVL  164 (764)
Q Consensus        86 ~v~~L~L~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls-~n~l~~~~p~~~~~l~~L~~L~L  164 (764)
                      .++.|+|++|+++...+..|..+++|++||+++|.+....+..+..+..++.++.. .|.++...|..|.++++|++|++
T Consensus        33 ~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~l~~L~~L~l  112 (284)
T d1ozna_          33 ASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHL  112 (284)
T ss_dssp             TCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEEC
T ss_pred             CCCEEECcCCcCCCCCHHHhhccccccccccccccccccccccccccccccccccccccccccccchhhcccccCCEEec
Confidence            57899999999998777889999999999999999998888889999999999875 56677667888999999999999


Q ss_pred             eCCcCCCCCCccCCCCCCCcEEEccCccCCCCCcccccCCCCCcEEEccCccCCCcCcccccCCCCCCEEeeeCCcCCCC
Q 004275          165 EDNQLVGPLPENLGNLKSLRRILLSSNNFTGSIPESYGNLKNLTEFRIDGSNLTGRIPNFIGNWTKLDRLDLQGTSLEGP  244 (764)
Q Consensus       165 s~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~  244 (764)
                      ++|.+....+..+...++|+.+++++|++++..+..|..+++|+.|++++|++++..+..|..+++|+.+++++|++++.
T Consensus       113 ~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~N~l~~l~~~~f~~l~~L~~l~l~~N~l~~i  192 (284)
T d1ozna_         113 DRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHV  192 (284)
T ss_dssp             TTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEE
T ss_pred             CCcccccccccccchhcccchhhhccccccccChhHhccccchhhcccccCcccccchhhhccccccchhhhhhcccccc
Confidence            99999877777888999999999999999987778899999999999999999988889999999999999999999988


Q ss_pred             CccchhcCCCCCEEEcCCCCCCCCCCCCccCCccccccccccccccccCCccccCCCCCCEEeccCCCCCC
Q 004275          245 IPSTISQLKNLTELRISDLKGSSSSFPNLQDMKKMERLILRNCLITGRIPEYIEDMTDLKILDLSFNQLTG  315 (764)
Q Consensus       245 ~p~~l~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g  315 (764)
                      .|..|..+++|++|++++|+                        +.+..|..|..+++|++|++++|.+..
T Consensus       193 ~~~~f~~l~~L~~L~l~~N~------------------------i~~~~~~~~~~~~~L~~L~l~~N~l~C  239 (284)
T d1ozna_         193 HPHAFRDLGRLMTLYLFANN------------------------LSALPTEALAPLRALQYLRLNDNPWVC  239 (284)
T ss_dssp             CTTTTTTCTTCCEEECCSSC------------------------CSCCCHHHHTTCTTCCEEECCSSCEEC
T ss_pred             ChhHhhhhhhcccccccccc------------------------cccccccccccccccCEEEecCCCCCC
Confidence            88888887777777766644                        443444445555555555555555543


No 7  
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.89  E-value=4e-22  Score=215.40  Aligned_cols=259  Identities=25%  Similarity=0.426  Sum_probs=181.0

Q ss_pred             eEEEEEcCCCcccccCCccCCCCCCCCEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEee
Q 004275           86 HVTVILLKGFNLAGVIPEEFGNLTFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVLE  165 (764)
Q Consensus        86 ~v~~L~L~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls  165 (764)
                      ++++|+++++++.. + +.+..|++|++|||++|++++. | .++++++|++|++++|++.+..  .++++++|+.|+++
T Consensus        45 ~l~~L~l~~~~I~~-l-~gl~~L~nL~~L~Ls~N~l~~l-~-~l~~L~~L~~L~L~~n~i~~i~--~l~~l~~L~~L~~~  118 (384)
T d2omza2          45 QVTTLQADRLGIKS-I-DGVEYLNNLTQINFSNNQLTDI-T-PLKNLTKLVDILMNNNQIADIT--PLANLTNLTGLTLF  118 (384)
T ss_dssp             TCCEEECCSSCCCC-C-TTGGGCTTCCEEECCSSCCCCC-G-GGTTCTTCCEEECCSSCCCCCG--GGTTCTTCCEEECC
T ss_pred             CCCEEECCCCCCCC-c-cccccCCCCCEEeCcCCcCCCC-c-cccCCccccccccccccccccc--cccccccccccccc
Confidence            58888888888764 3 3577888999999999988854 4 3888999999999999887543  37888899999888


Q ss_pred             CCcCCCCCC---------------------------------------------------------------ccCCCCCC
Q 004275          166 DNQLVGPLP---------------------------------------------------------------ENLGNLKS  182 (764)
Q Consensus       166 ~N~l~~~~p---------------------------------------------------------------~~l~~l~~  182 (764)
                      +|.+++..+                                                               ..+..+++
T Consensus       119 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  198 (384)
T d2omza2         119 NNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTN  198 (384)
T ss_dssp             SSCCCCCGGGTTCTTCSEEEEEEEEECCCGGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSCCCCCGGGGGCTT
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccccccccccccccc
Confidence            877653211                                                               12334566


Q ss_pred             CcEEEccCccCCCCCcccccCCCCCcEEEccCccCCCcCcccccCCCCCCEEeeeCCcCCCCCccchhcCCCCCEEEcCC
Q 004275          183 LRRILLSSNNFTGSIPESYGNLKNLTEFRIDGSNLTGRIPNFIGNWTKLDRLDLQGTSLEGPIPSTISQLKNLTELRISD  262 (764)
Q Consensus       183 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~  262 (764)
                      ++.+++++|.+++..|  +...++|++|++++|.++. + ..+..+++|+.|++++|.+++..+  +..+++|+.|++++
T Consensus       199 ~~~l~l~~n~i~~~~~--~~~~~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~  272 (384)
T d2omza2         199 LESLIATNNQISDITP--LGILTNLDELSLNGNQLKD-I-GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGA  272 (384)
T ss_dssp             CSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC-C-GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCS
T ss_pred             cceeeccCCccCCCCc--ccccCCCCEEECCCCCCCC-c-chhhcccccchhccccCccCCCCc--ccccccCCEeeccC
Confidence            7777777777765433  4556677777777777764 2 356677777777777777775433  66677777777776


Q ss_pred             CCCCCCCCCCccCCccccccccccccccccCCccccCCCCCCEEeccCCCCCCCccccccCCCCCCEEeccCCcCcCCCC
Q 004275          263 LKGSSSSFPNLQDMKKMERLILRNCLITGRIPEYIEDMTDLKILDLSFNQLTGPVPGILQNLKKIDYIFLTNNSLSGTLP  342 (764)
Q Consensus       263 n~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p  342 (764)
                      +...  .++.+..++.++.+.++.|.+++.  ..+..+++++.|++++|++++..+  +..+++|+.|++++|++++ ++
T Consensus       273 ~~l~--~~~~~~~~~~l~~l~~~~n~l~~~--~~~~~~~~l~~L~ls~n~l~~l~~--l~~l~~L~~L~L~~n~l~~-l~  345 (384)
T d2omza2         273 NQIS--NISPLAGLTALTNLELNENQLEDI--SPISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFANNKVSD-VS  345 (384)
T ss_dssp             SCCC--CCGGGTTCTTCSEEECCSSCCSCC--GGGGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCC-CG
T ss_pred             cccC--CCCccccccccccccccccccccc--cccchhcccCeEECCCCCCCCCcc--cccCCCCCEEECCCCCCCC-Ch
Confidence            5443  233456666777777777777642  236667788888888888876533  6777888888888888874 33


Q ss_pred             hhh--hcCCCeEEeecCcCCCCCC
Q 004275          343 DWI--LTSEKNLDLSYNNFTESSP  364 (764)
Q Consensus       343 ~~~--~~~l~~L~Ls~N~l~~~~p  364 (764)
                       .+  .+.++.|++++|++++.+|
T Consensus       346 -~l~~l~~L~~L~l~~N~l~~l~~  368 (384)
T d2omza2         346 -SLANLTNINWLSAGHNQISDLTP  368 (384)
T ss_dssp             -GGGGCTTCCEEECCSSCCCBCGG
T ss_pred             -hHcCCCCCCEEECCCCcCCCChh
Confidence             23  4567788888888887655


No 8  
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.88  E-value=1e-21  Score=212.21  Aligned_cols=255  Identities=24%  Similarity=0.348  Sum_probs=212.2

Q ss_pred             eeEEEEEcCCCcccccCCccCCCCCCCCEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccC---------------
Q 004275           85 CHVTVILLKGFNLAGVIPEEFGNLTFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSI---------------  149 (764)
Q Consensus        85 ~~v~~L~L~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~---------------  149 (764)
                      .+++.|+|++|++++..  .++++++|++|++++|.+.+. + .++.+++|+.|++++|.+++..               
T Consensus        66 ~nL~~L~Ls~N~l~~l~--~l~~L~~L~~L~L~~n~i~~i-~-~l~~l~~L~~L~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (384)
T d2omza2          66 NNLTQINFSNNQLTDIT--PLKNLTKLVDILMNNNQIADI-T-PLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSS  141 (384)
T ss_dssp             TTCCEEECCSSCCCCCG--GGTTCTTCCEEECCSSCCCCC-G-GGTTCTTCCEEECCSSCCCCCGGGTTCTTCSEEEEEE
T ss_pred             CCCCEEeCcCCcCCCCc--cccCCcccccccccccccccc-c-ccccccccccccccccccccccccccccccccccccc
Confidence            46999999999998753  399999999999999999864 3 3899999999999988765311               


Q ss_pred             ------------------------------------------------CcCcCCCCCCCEEEeeCCcCCCCCCccCCCCC
Q 004275          150 ------------------------------------------------PLEIGDISTLEELVLEDNQLVGPLPENLGNLK  181 (764)
Q Consensus       150 ------------------------------------------------p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~  181 (764)
                                                                      +..+..+++++.+++++|.+++..|  +...+
T Consensus       142 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~l~~n~i~~~~~--~~~~~  219 (384)
T d2omza2         142 NTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITP--LGILT  219 (384)
T ss_dssp             EEECCCGGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSCCCCCGGGGGCTTCSEEECCSSCCCCCGG--GGGCT
T ss_pred             ccccccccccccccccccccccccchhhhhccccccccccccccccccccccccccccceeeccCCccCCCCc--ccccC
Confidence                                                            1234456889999999999987654  46678


Q ss_pred             CCcEEEccCccCCCCCcccccCCCCCcEEEccCccCCCcCcccccCCCCCCEEeeeCCcCCCCCccchhcCCCCCEEEcC
Q 004275          182 SLRRILLSSNNFTGSIPESYGNLKNLTEFRIDGSNLTGRIPNFIGNWTKLDRLDLQGTSLEGPIPSTISQLKNLTELRIS  261 (764)
Q Consensus       182 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~  261 (764)
                      +|+.|++++|+++. + +.+..+++|+.|++++|.+++..+  +..+++|++|++++|++++..  .+..++.++.+.+.
T Consensus       220 ~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~~~l~~~~--~~~~~~~l~~l~~~  293 (384)
T d2omza2         220 NLDELSLNGNQLKD-I-GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNIS--PLAGLTALTNLELN  293 (384)
T ss_dssp             TCCEEECCSSCCCC-C-GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCG--GGTTCTTCSEEECC
T ss_pred             CCCEEECCCCCCCC-c-chhhcccccchhccccCccCCCCc--ccccccCCEeeccCcccCCCC--cccccccccccccc
Confidence            99999999999984 3 468899999999999999987543  788999999999999998654  37889999999999


Q ss_pred             CCCCCCCCCCCccCCccccccccccccccccCCccccCCCCCCEEeccCCCCCCCccccccCCCCCCEEeccCCcCcCCC
Q 004275          262 DLKGSSSSFPNLQDMKKMERLILRNCLITGRIPEYIEDMTDLKILDLSFNQLTGPVPGILQNLKKIDYIFLTNNSLSGTL  341 (764)
Q Consensus       262 ~n~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~  341 (764)
                      .+....  ++.+..+++++.|++++|++++..  .+..+++|++|++++|++++ ++ .+.++++|++|++++|++++..
T Consensus       294 ~n~l~~--~~~~~~~~~l~~L~ls~n~l~~l~--~l~~l~~L~~L~L~~n~l~~-l~-~l~~l~~L~~L~l~~N~l~~l~  367 (384)
T d2omza2         294 ENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRLFFANNKVSD-VS-SLANLTNINWLSAGHNQISDLT  367 (384)
T ss_dssp             SSCCSC--CGGGGGCTTCSEEECCSSCCSCCG--GGGGCTTCCEEECCSSCCCC-CG-GGGGCTTCCEEECCSSCCCBCG
T ss_pred             cccccc--ccccchhcccCeEECCCCCCCCCc--ccccCCCCCEEECCCCCCCC-Ch-hHcCCCCCCEEECCCCcCCCCh
Confidence            866543  455788899999999999999654  37889999999999999985 44 5899999999999999999876


Q ss_pred             ChhhhcCCCeEEeecC
Q 004275          342 PDWILTSEKNLDLSYN  357 (764)
Q Consensus       342 p~~~~~~l~~L~Ls~N  357 (764)
                      |-.-++.++.|+|++|
T Consensus       368 ~l~~l~~L~~L~L~~N  383 (384)
T d2omza2         368 PLANLTRITQLGLNDQ  383 (384)
T ss_dssp             GGTTCTTCSEEECCCE
T ss_pred             hhccCCCCCEeeCCCC
Confidence            6444678899999998


No 9  
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.86  E-value=3.4e-21  Score=197.66  Aligned_cols=202  Identities=23%  Similarity=0.250  Sum_probs=112.8

Q ss_pred             CCCCCCEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEeeCCcCCCCCCccCCCCCCCcEE
Q 004275          107 NLTFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVLEDNQLVGPLPENLGNLKSLRRI  186 (764)
Q Consensus       107 ~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L  186 (764)
                      +...+.+.|.++++++ .+|+.+.  ++|++|+|++|++++..+..|.++++|++|+|++|+++. +| .++.+++|++|
T Consensus         8 ~~~~~~~v~C~~~~L~-~iP~~lp--~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L   82 (266)
T d1p9ag_           8 KVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTK-LQ-VDGTLPVLGTL   82 (266)
T ss_dssp             CSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCE-EE-CCSCCTTCCEE
T ss_pred             ccCCCeEEEccCCCCC-eeCcCcC--cCCCEEECcCCcCCCcCHHHhhccccccccccccccccc-cc-ccccccccccc
Confidence            3445555666666666 3554442  356666666666664444556666666666666666552 22 23455556666


Q ss_pred             EccCccCCCCCcccccCCCCCcEEEccCccCCCcCcccccCCCCCCEEeeeCCcCCCCCccchhcCCCCCEEEcCCCCCC
Q 004275          187 LLSSNNFTGSIPESYGNLKNLTEFRIDGSNLTGRIPNFIGNWTKLDRLDLQGTSLEGPIPSTISQLKNLTELRISDLKGS  266 (764)
Q Consensus       187 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~n~~~  266 (764)
                      +|++|++++ .+..+..+++|+.|++++|.+....+..+..+.++++|++++|.++...+.                   
T Consensus        83 ~Ls~N~l~~-~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~l~~L~l~~n~l~~l~~~-------------------  142 (266)
T d1p9ag_          83 DLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPG-------------------  142 (266)
T ss_dssp             ECCSSCCSS-CCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTT-------------------
T ss_pred             ccccccccc-cccccccccccccccccccccceeeccccccccccccccccccccceeccc-------------------
Confidence            665555552 233444445555555544444443334444444444444444444332222                   


Q ss_pred             CCCCCCccCCccccccccccccccccCCccccCCCCCCEEeccCCCCCCCccccccCCCCCCEEeccCCcCcC
Q 004275          267 SSSFPNLQDMKKMERLILRNCLITGRIPEYIEDMTDLKILDLSFNQLTGPVPGILQNLKKIDYIFLTNNSLSG  339 (764)
Q Consensus       267 ~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g  339 (764)
                           .+..+++|+.|++++|++++..+..|..+++|++|+|++|+|+ .+|+.+..+++|+.|+|++|++..
T Consensus       143 -----~~~~l~~l~~l~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~L~-~lp~~~~~~~~L~~L~L~~Np~~C  209 (266)
T d1p9ag_         143 -----LLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLC  209 (266)
T ss_dssp             -----TTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCC
T ss_pred             -----cccccccchhcccccccccccCccccccccccceeecccCCCc-ccChhHCCCCCCCEEEecCCCCCC
Confidence                 2334455555566666666666666677777777777777777 666666667777777777776653


No 10 
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.85  E-value=5.5e-21  Score=196.06  Aligned_cols=197  Identities=22%  Similarity=0.209  Sum_probs=166.2

Q ss_pred             EEEEEcCCCcccccCCccCCCCCCCCEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEeeC
Q 004275           87 VTVILLKGFNLAGVIPEEFGNLTFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVLED  166 (764)
Q Consensus        87 v~~L~L~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~  166 (764)
                      ..+++.++++++. +|+.+.  ++|++|||++|.|++..+..|.++++|++|+|++|+++ .+| .++.+++|++|+|++
T Consensus        12 ~~~v~C~~~~L~~-iP~~lp--~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~-~l~-~~~~l~~L~~L~Ls~   86 (266)
T d1p9ag_          12 HLEVNCDKRNLTA-LPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELT-KLQ-VDGTLPVLGTLDLSH   86 (266)
T ss_dssp             CCEEECTTSCCSS-CCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCC-EEE-CCSCCTTCCEEECCS
T ss_pred             CeEEEccCCCCCe-eCcCcC--cCCCEEECcCCcCCCcCHHHhhcccccccccccccccc-ccc-ccccccccccccccc
Confidence            4456899999885 677665  57999999999999777788999999999999999998 444 467899999999999


Q ss_pred             CcCCCCCCccCCCCCCCcEEEccCccCCCCCcccccCCCCCcEEEccCccCCCcCcccccCCCCCCEEeeeCCcCCCCCc
Q 004275          167 NQLVGPLPENLGNLKSLRRILLSSNNFTGSIPESYGNLKNLTEFRIDGSNLTGRIPNFIGNWTKLDRLDLQGTSLEGPIP  246 (764)
Q Consensus       167 N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p  246 (764)
                      |++++ .+..+.++++|+.|++++|.+....+..+..+.++++|++++|.++...+..+..+++|+.|++++|++++..+
T Consensus        87 N~l~~-~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~l~~L~l~~n~l~~l~~~~~~~l~~l~~l~l~~N~l~~~~~  165 (266)
T d1p9ag_          87 NQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPA  165 (266)
T ss_dssp             SCCSS-CCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCT
T ss_pred             ccccc-cccccccccccccccccccccceeeccccccccccccccccccccceeccccccccccchhcccccccccccCc
Confidence            99984 57789999999999999999998888889999999999999999998888888899999999999999997777


Q ss_pred             cchhcCCCCCEEEcCCCCCCCCCCCCccCCccccccccccccccccCCccccCCCCCCEEeccCCCCC
Q 004275          247 STISQLKNLTELRISDLKGSSSSFPNLQDMKKMERLILRNCLITGRIPEYIEDMTDLKILDLSFNQLT  314 (764)
Q Consensus       247 ~~l~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~  314 (764)
                      ..|..+++|++|+|+                        +|+|+ .+|..+..+++|+.|+|++|.+.
T Consensus       166 ~~~~~l~~L~~L~Ls------------------------~N~L~-~lp~~~~~~~~L~~L~L~~Np~~  208 (266)
T d1p9ag_         166 GLLNGLENLDTLLLQ------------------------ENSLY-TIPKGFFGSHLLPFAFLHGNPWL  208 (266)
T ss_dssp             TTTTTCTTCCEEECC------------------------SSCCC-CCCTTTTTTCCCSEEECCSCCBC
T ss_pred             cccccccccceeecc------------------------cCCCc-ccChhHCCCCCCCEEEecCCCCC
Confidence            666666655555555                        55555 56666677788888888888775


No 11 
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.71  E-value=6.5e-17  Score=161.10  Aligned_cols=187  Identities=23%  Similarity=0.342  Sum_probs=87.8

Q ss_pred             cCCCCcEEecccCcCcccCCcCcCCCCCCCEEEeeCCcCCCCCCccCCCCCCCcEEEccCccCCCCCcccccCCCCCcEE
Q 004275          131 RLQNLTKLLILGNRLSGSIPLEIGDISTLEELVLEDNQLVGPLPENLGNLKSLRRILLSSNNFTGSIPESYGNLKNLTEF  210 (764)
Q Consensus       131 ~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L  210 (764)
                      .+.+|++|++.+|.++. + ..+..+++|++|++++|++++..|  +.++++|+++++++|.++ .++ .+..+++|+.+
T Consensus        39 ~l~~L~~L~l~~~~i~~-l-~~l~~l~~L~~L~ls~n~i~~~~~--l~~l~~l~~l~~~~n~~~-~i~-~l~~l~~L~~l  112 (227)
T d1h6ua2          39 DLDGITTLSAFGTGVTT-I-EGVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLK-NVS-AIAGLQSIKTL  112 (227)
T ss_dssp             HHHTCCEEECTTSCCCC-C-TTGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCS-CCG-GGTTCTTCCEE
T ss_pred             HcCCcCEEECCCCCCCc-c-hhHhcCCCCcEeecCCceeecccc--cccccccccccccccccc-ccc-ccccccccccc
Confidence            34444444444444442 2 124444444444444444443221  444444444444444443 121 24444444444


Q ss_pred             EccCccCCCcCcccccCCCCCCEEeeeCCcCCCCCccchhcCCCCCEEEcCCCCCCCCCCCCccCCcccccccccccccc
Q 004275          211 RIDGSNLTGRIPNFIGNWTKLDRLDLQGTSLEGPIPSTISQLKNLTELRISDLKGSSSSFPNLQDMKKMERLILRNCLIT  290 (764)
Q Consensus       211 ~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~N~l~  290 (764)
                      +++++...+.  ..+...+.++.+.++.+.+....  .+...++|+.|++++|...  ..+.+..+++|+.|++++|+++
T Consensus       113 ~l~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~Ls~n~l~  186 (227)
T d1h6ua2         113 DLTSTQITDV--TPLAGLSNLQVLYLDLNQITNIS--PLAGLTNLQYLSIGNAQVS--DLTPLANLSKLTTLKADDNKIS  186 (227)
T ss_dssp             ECTTSCCCCC--GGGTTCTTCCEEECCSSCCCCCG--GGGGCTTCCEEECCSSCCC--CCGGGTTCTTCCEEECCSSCCC
T ss_pred             cccccccccc--chhccccchhhhhchhhhhchhh--hhccccccccccccccccc--cchhhcccccceecccCCCccC
Confidence            4444444322  12334445555555555544321  2444455555555543322  1222444555555555566555


Q ss_pred             ccCCccccCCCCCCEEeccCCCCCCCccccccCCCCCCEEecc
Q 004275          291 GRIPEYIEDMTDLKILDLSFNQLTGPVPGILQNLKKIDYIFLT  333 (764)
Q Consensus       291 ~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~  333 (764)
                      + ++ .+..+++|++|++++|++++..|  +.++++|++|+++
T Consensus       187 ~-l~-~l~~l~~L~~L~Ls~N~lt~i~~--l~~l~~L~~L~ls  225 (227)
T d1h6ua2         187 D-IS-PLASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLT  225 (227)
T ss_dssp             C-CG-GGGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEE
T ss_pred             C-Ch-hhcCCCCCCEEECcCCcCCCCcc--cccCCCCCEEEee
Confidence            3 22 25566666666666666664322  5666666666665


No 12 
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.70  E-value=1.8e-17  Score=166.78  Aligned_cols=219  Identities=19%  Similarity=0.135  Sum_probs=145.7

Q ss_pred             EEEcCCCcccccCCccCCCCCCCCEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCC-cCcCCCCCCCEEEeeC-
Q 004275           89 VILLKGFNLAGVIPEEFGNLTFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIP-LEIGDISTLEELVLED-  166 (764)
Q Consensus        89 ~L~L~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p-~~~~~l~~L~~L~Ls~-  166 (764)
                      .++.++.+++ .+|+.+.  +++++|||++|.++...+..|.++++|++|++++|.+...+| ..|..++++++|++.. 
T Consensus        12 ~i~c~~~~l~-~iP~~l~--~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~~   88 (242)
T d1xwdc1          12 VFLCQESKVT-EIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKA   88 (242)
T ss_dssp             EEEEESCSCS-SCCSCSC--SCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEECC
T ss_pred             EEEEeCCCCC-CcCCCCC--CCCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeecccccccccccccccccc
Confidence            4555666666 5676553  578999999999986556678999999999999998876554 4678899999998764 


Q ss_pred             CcCCCCCCccCCCCCCCcEEEccCccCCCCCcc-cccCCCCCcEEEccCccCCCcCcccccCCC-CCCEEeeeCCcCCCC
Q 004275          167 NQLVGPLPENLGNLKSLRRILLSSNNFTGSIPE-SYGNLKNLTEFRIDGSNLTGRIPNFIGNWT-KLDRLDLQGTSLEGP  244 (764)
Q Consensus       167 N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~  244 (764)
                      |++....+..|.++++|++|++++|++....+. .+..+..+..+...++.+....+..+..++ .++.|++++|+++..
T Consensus        89 n~l~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~~~~~l~~l~~~~~~n~~l~~i~~~~~~~~~~~l~~L~l~~n~l~~i  168 (242)
T d1xwdc1          89 NNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEI  168 (242)
T ss_dssp             TTCCEECTTSEECCTTCCEEEEESCCCCSCCCCTTTCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEE
T ss_pred             ccccccccccccccccccccccchhhhcccccccccccccccccccccccccccccccccccccccceeeeccccccccc
Confidence            677767777788899999999999988743221 233445555555566666544444554443 566677777766633


Q ss_pred             CccchhcCCCCCEEEcCCCCCCCCCCCCccCCccccccccccccccccCCccccCCCCCCEEeccCCCCCCCccccccCC
Q 004275          245 IPSTISQLKNLTELRISDLKGSSSSFPNLQDMKKMERLILRNCLITGRIPEYIEDMTDLKILDLSFNQLTGPVPGILQNL  324 (764)
Q Consensus       245 ~p~~l~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l  324 (764)
                      .+ ......+++                       +.+++++|+++...+..|.++++|++|++++|+|+...+..|.++
T Consensus       169 ~~-~~~~~~~l~-----------------------~~~~l~~n~l~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l  224 (242)
T d1xwdc1         169 HN-CAFNGTQLD-----------------------ELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENL  224 (242)
T ss_dssp             CT-TTTTTCCEE-----------------------EEECTTCTTCCCCCTTTTTTSCCCSEEECTTSCCCCCCSSSCTTC
T ss_pred             cc-ccccchhhh-----------------------ccccccccccccccHHHhcCCCCCCEEECCCCcCCccCHHHHcCC
Confidence            22 222222222                       223455566664434456777888888888888875555567777


Q ss_pred             CCCCEEeccC
Q 004275          325 KKIDYIFLTN  334 (764)
Q Consensus       325 ~~L~~L~L~~  334 (764)
                      ++|+++++.+
T Consensus       225 ~~L~~l~~~~  234 (242)
T d1xwdc1         225 KKLRARSTYN  234 (242)
T ss_dssp             CEEESSSEES
T ss_pred             cccccCcCCC
Confidence            7776666543


No 13 
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.70  E-value=1.2e-15  Score=161.52  Aligned_cols=249  Identities=23%  Similarity=0.270  Sum_probs=151.2

Q ss_pred             eEEEEEcCCCcccccCCccCCCCCCCCEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEee
Q 004275           86 HVTVILLKGFNLAGVIPEEFGNLTFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVLE  165 (764)
Q Consensus        86 ~v~~L~L~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls  165 (764)
                      +++.|+|++++++. +|+.   .++|++|+|++|+|+ .+|+.   +.+|+.|++++|+++ .++.-   .+.|++|+++
T Consensus        39 ~l~~LdLs~~~L~~-lp~~---~~~L~~L~Ls~N~l~-~lp~~---~~~L~~L~l~~n~l~-~l~~l---p~~L~~L~L~  106 (353)
T d1jl5a_          39 QAHELELNNLGLSS-LPEL---PPHLESLVASCNSLT-ELPEL---PQSLKSLLVDNNNLK-ALSDL---PPLLEYLGVS  106 (353)
T ss_dssp             TCSEEECTTSCCSC-CCSC---CTTCSEEECCSSCCS-SCCCC---CTTCCEEECCSSCCS-CCCSC---CTTCCEEECC
T ss_pred             CCCEEEeCCCCCCC-CCCC---CCCCCEEECCCCCCc-ccccc---hhhhhhhhhhhcccc-hhhhh---cccccccccc
Confidence            47789999999874 6753   568999999999998 67765   467899999999887 34421   2469999999


Q ss_pred             CCcCCCCCCccCCCCCCCcEEEccCccCCCCCc------------------ccccCCCCCcEEEccCccCCCcC------
Q 004275          166 DNQLVGPLPENLGNLKSLRRILLSSNNFTGSIP------------------ESYGNLKNLTEFRIDGSNLTGRI------  221 (764)
Q Consensus       166 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p------------------~~~~~l~~L~~L~L~~n~l~~~~------  221 (764)
                      +|.+. .+|. ++.+++|++|++++|.+....+                  ..+..++.++.+++..|......      
T Consensus       107 ~n~l~-~lp~-~~~l~~L~~L~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~l~~l~~l~~L~l~~n~~~~~~~~~~~~  184 (353)
T d1jl5a_         107 NNQLE-KLPE-LQNSSFLKIIDVDNNSLKKLPDLPPSLEFIAAGNNQLEELPELQNLPFLTAIYADNNSLKKLPDLPLSL  184 (353)
T ss_dssp             SSCCS-SCCC-CTTCTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSSCCCCTTCTTCCEEECCSSCCSSCCCCCTTC
T ss_pred             ccccc-cccc-hhhhccceeeccccccccccccccccccchhhccccccccccccccccceecccccccccccccccccc
Confidence            99987 4564 6789999999999888763221                  12334455556666555443211      


Q ss_pred             ------------cccccCCCCCCEEeeeCCcCCCCCccchhcCCCCCEEEcCCCCCCCCCCCCccCCccccccccccccc
Q 004275          222 ------------PNFIGNWTKLDRLDLQGTSLEGPIPSTISQLKNLTELRISDLKGSSSSFPNLQDMKKMERLILRNCLI  289 (764)
Q Consensus       222 ------------p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~N~l  289 (764)
                                  ...+..++.|+.+++++|.... +|.   ...++..+.+.++...... .   ....+...++..+.+
T Consensus       185 ~~l~~~~~~~~~~~~~~~l~~L~~l~l~~n~~~~-~~~---~~~~l~~~~~~~~~~~~~~-~---~~~~l~~~~~~~~~~  256 (353)
T d1jl5a_         185 ESIVAGNNILEELPELQNLPFLTTIYADNNLLKT-LPD---LPPSLEALNVRDNYLTDLP-E---LPQSLTFLDVSENIF  256 (353)
T ss_dssp             CEEECCSSCCSSCCCCTTCTTCCEEECCSSCCSS-CCS---CCTTCCEEECCSSCCSCCC-C---CCTTCCEEECCSSCC
T ss_pred             cccccccccccccccccccccccccccccccccc-ccc---ccccccccccccccccccc-c---ccccccccccccccc
Confidence                        0112333444555555444332 221   1223344444433221110 0   011122222222211


Q ss_pred             c----------------ccCCccccCCCCCCEEeccCCCCCCCccccccCCCCCCEEeccCCcCcCCCChhhhcCCCeEE
Q 004275          290 T----------------GRIPEYIEDMTDLKILDLSFNQLTGPVPGILQNLKKIDYIFLTNNSLSGTLPDWILTSEKNLD  353 (764)
Q Consensus       290 ~----------------~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~l~~L~  353 (764)
                      .                ..++.....+++|++|++++|+|+ .+|..   +++|+.|++++|+|+ .+|.. ..+++.|+
T Consensus       257 ~~l~~l~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~---~~~L~~L~L~~N~L~-~l~~~-~~~L~~L~  330 (353)
T d1jl5a_         257 SGLSELPPNLYYLNASSNEIRSLCDLPPSLEELNVSNNKLI-ELPAL---PPRLERLIASFNHLA-EVPEL-PQNLKQLH  330 (353)
T ss_dssp             SEESCCCTTCCEEECCSSCCSEECCCCTTCCEEECCSSCCS-CCCCC---CTTCCEEECCSSCCS-CCCCC-CTTCCEEE
T ss_pred             cccccccchhcccccccCccccccccCCCCCEEECCCCccC-ccccc---cCCCCEEECCCCcCC-ccccc-cCCCCEEE
Confidence            1                112222334578999999999988 56643   578888999999988 56653 45788999


Q ss_pred             eecCcCCCC
Q 004275          354 LSYNNFTES  362 (764)
Q Consensus       354 Ls~N~l~~~  362 (764)
                      +++|+++..
T Consensus       331 L~~N~L~~l  339 (353)
T d1jl5a_         331 VEYNPLREF  339 (353)
T ss_dssp             CCSSCCSSC
T ss_pred             CcCCcCCCC
Confidence            999998864


No 14 
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.70  E-value=6.9e-17  Score=160.89  Aligned_cols=205  Identities=20%  Similarity=0.280  Sum_probs=157.2

Q ss_pred             EEEEcCCCcccccCCccCCCCCCCCEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEeeCC
Q 004275           88 TVILLKGFNLAGVIPEEFGNLTFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVLEDN  167 (764)
Q Consensus        88 ~~L~L~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N  167 (764)
                      ..+++..+++++.+  .+..|.+|+.|++.+|+++. ++ .+.++++|++|++++|.+++..|  +.++++|+++++++|
T Consensus        22 ~~~~l~~~~~~d~~--~~~~l~~L~~L~l~~~~i~~-l~-~l~~l~~L~~L~ls~n~i~~~~~--l~~l~~l~~l~~~~n   95 (227)
T d1h6ua2          22 IKIAAGKSNVTDTV--TQADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGN   95 (227)
T ss_dssp             HHHHTTCSSTTSEE--CHHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSC
T ss_pred             HHHHhCCCCcCCcC--CHHHcCCcCEEECCCCCCCc-ch-hHhcCCCCcEeecCCceeecccc--ccccccccccccccc
Confidence            33445555555543  24567888999999998874 43 58889999999999998875443  788899999999988


Q ss_pred             cCCCCCCccCCCCCCCcEEEccCccCCCCCcccccCCCCCcEEEccCccCCCcCcccccCCCCCCEEeeeCCcCCCCCcc
Q 004275          168 QLVGPLPENLGNLKSLRRILLSSNNFTGSIPESYGNLKNLTEFRIDGSNLTGRIPNFIGNWTKLDRLDLQGTSLEGPIPS  247 (764)
Q Consensus       168 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~  247 (764)
                      .++. ++ .+.++++|+.++++.+...+.  ..+...+.+..+.++.+.+....  .+..+++|+.|++++|.+....  
T Consensus        96 ~~~~-i~-~l~~l~~L~~l~l~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~L~~L~l~~n~~~~~~--  167 (227)
T d1h6ua2          96 PLKN-VS-AIAGLQSIKTLDLTSTQITDV--TPLAGLSNLQVLYLDLNQITNIS--PLAGLTNLQYLSIGNAQVSDLT--  167 (227)
T ss_dssp             CCSC-CG-GGTTCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECCSSCCCCCG--GGGGCTTCCEEECCSSCCCCCG--
T ss_pred             cccc-cc-ccccccccccccccccccccc--chhccccchhhhhchhhhhchhh--hhccccccccccccccccccch--
Confidence            8763 43 578889999999988887643  33667788888999888877543  3667788999999999887543  


Q ss_pred             chhcCCCCCEEEcCCCCCCCCCCCCccCCccccccccccccccccCCccccCCCCCCEEeccC
Q 004275          248 TISQLKNLTELRISDLKGSSSSFPNLQDMKKMERLILRNCLITGRIPEYIEDMTDLKILDLSF  310 (764)
Q Consensus       248 ~l~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~  310 (764)
                      .++++++|+.|++++|+..  .++.+..+++|++|++++|++++. + .+.++++|+.|++++
T Consensus       168 ~l~~l~~L~~L~Ls~n~l~--~l~~l~~l~~L~~L~Ls~N~lt~i-~-~l~~l~~L~~L~lsn  226 (227)
T d1h6ua2         168 PLANLSKLTTLKADDNKIS--DISPLASLPNLIEVHLKNNQISDV-S-PLANTSNLFIVTLTN  226 (227)
T ss_dssp             GGTTCTTCCEEECCSSCCC--CCGGGGGCTTCCEEECTTSCCCBC-G-GGTTCTTCCEEEEEE
T ss_pred             hhcccccceecccCCCccC--CChhhcCCCCCCEEECcCCcCCCC-c-ccccCCCCCEEEeeC
Confidence            3788999999999987654  356688889999999999999854 3 378899999999874


No 15 
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.69  E-value=6.7e-17  Score=162.55  Aligned_cols=225  Identities=16%  Similarity=0.131  Sum_probs=122.1

Q ss_pred             CEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEeeCCcCCCCCC-ccCCCCCCCcEEEccC
Q 004275          112 QEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVLEDNQLVGPLP-ENLGNLKSLRRILLSS  190 (764)
Q Consensus       112 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~l~~l~~L~~L~Ls~  190 (764)
                      +.++.++++++ .+|..+.  +++++|+|++|.++...+..|.++++|++|+|++|.+...++ ..|.++++++++.+..
T Consensus        11 ~~i~c~~~~l~-~iP~~l~--~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~   87 (242)
T d1xwdc1          11 RVFLCQESKVT-EIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK   87 (242)
T ss_dssp             SEEEEESCSCS-SCCSCSC--SCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEEC
T ss_pred             CEEEEeCCCCC-CcCCCCC--CCCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeeccccccccccccccccc
Confidence            45666666655 4554331  355566666655553333345555555555555555544332 2344455555554432


Q ss_pred             ccCCCCCcccccCCCCCcEEEccCccCCCcCcccccCCCCCCEEeeeCCcCCCCCc-cchhcCCCCCEEEcCCCCCCCCC
Q 004275          191 NNFTGSIPESYGNLKNLTEFRIDGSNLTGRIPNFIGNWTKLDRLDLQGTSLEGPIP-STISQLKNLTELRISDLKGSSSS  269 (764)
Q Consensus       191 N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~L~~n~~~~~~  269 (764)
                                             .|++....+..+..+++|+.|++++|++....+ ..+..++.+..+...++......
T Consensus        88 -----------------------~n~l~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~~~~~l~~l~~~~~~n~~l~~i~  144 (242)
T d1xwdc1          88 -----------------------ANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIE  144 (242)
T ss_dssp             -----------------------CTTCCEECTTSEECCTTCCEEEEESCCCCSCCCCTTTCBSSCEEEEEESCTTCCEEC
T ss_pred             -----------------------cccccccccccccccccccccccchhhhccccccccccccccccccccccccccccc
Confidence                                   233433334444555555555555555442211 11222333333333332322222


Q ss_pred             CCCccCC-ccccccccccccccccCCccccCCCCCCEE-eccCCCCCCCccccccCCCCCCEEeccCCcCcCCCChhhhc
Q 004275          270 FPNLQDM-KKMERLILRNCLITGRIPEYIEDMTDLKIL-DLSFNQLTGPVPGILQNLKKIDYIFLTNNSLSGTLPDWILT  347 (764)
Q Consensus       270 ~~~l~~l-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L-~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~  347 (764)
                      ...+..+ ..++.|++++|+++...+..+ ..++++.+ ++++|+++...+..|.++++|++|++++|+|+ .+|.+.+.
T Consensus       145 ~~~~~~~~~~l~~L~l~~n~l~~i~~~~~-~~~~l~~~~~l~~n~l~~l~~~~f~~l~~L~~L~Ls~N~l~-~l~~~~~~  222 (242)
T d1xwdc1         145 RNSFVGLSFESVILWLNKNGIQEIHNCAF-NGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIH-SLPSYGLE  222 (242)
T ss_dssp             TTSSTTSBSSCEEEECCSSCCCEECTTTT-TTCCEEEEECTTCTTCCCCCTTTTTTSCCCSEEECTTSCCC-CCCSSSCT
T ss_pred             ccccccccccceeeecccccccccccccc-cchhhhccccccccccccccHHHhcCCCCCCEEECCCCcCC-ccCHHHHc
Confidence            2233333 367788899999985544444 44565555 67888999665667999999999999999999 56666556


Q ss_pred             CCCeEE-eecCcCCCCCC
Q 004275          348 SEKNLD-LSYNNFTESSP  364 (764)
Q Consensus       348 ~l~~L~-Ls~N~l~~~~p  364 (764)
                      .+..|. ++.+++...||
T Consensus       223 ~l~~L~~l~~~~l~~lp~  240 (242)
T d1xwdc1         223 NLKKLRARSTYNLKKLPT  240 (242)
T ss_dssp             TCCEEESSSEESSSCSCC
T ss_pred             CCcccccCcCCCCCcCCC
Confidence            665553 33344554443


No 16 
>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.67  E-value=4.3e-17  Score=166.21  Aligned_cols=105  Identities=26%  Similarity=0.480  Sum_probs=91.6

Q ss_pred             cCccccCeeeccCCeeEEEEEEcCCCEEEEEEcCCcChhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEEcccC
Q 004275          659 NNFDAANKIGEGGFGPVYKGTLSDGAVIAVKQLSSKSKQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVYEYLE  738 (764)
Q Consensus       659 ~~~~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~  738 (764)
                      ++|+..+.||+|+||+||+|++.+++.||||++.... ...++|.+|++++++++|||||+++|+|...+..++|||||+
T Consensus         5 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~~~   83 (263)
T d1sm2a_           5 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFME   83 (263)
T ss_dssp             SCEEEEEEEECCSSCCEEEEEETTTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCT
T ss_pred             HHcEEEEEEeeCCCeEEEEEEECCCCEEEEEEECCCc-CcHHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEEecC
Confidence            4678889999999999999999888899999997643 345789999999999999999999999999999999999999


Q ss_pred             CCcHHHHHhcCCC---------------CCCCHHHHccccC
Q 004275          739 NNSLARALFGNAI---------------TKITYTFSLHLWN  764 (764)
Q Consensus       739 ~GsL~~~L~~~~~---------------~~l~~~~~~~i~h  764 (764)
                      +|+|.++++....               .++.|.|..+|+|
T Consensus        84 ~g~L~~~l~~~~~~~~~~~~~~i~~qia~gl~~lH~~~iiH  124 (263)
T d1sm2a_          84 HGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIH  124 (263)
T ss_dssp             TCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred             CCcHHHHhhccccCCCHHHHHHHHHHHHHHHHhhhccceee
Confidence            9999999976532               2477778888877


No 17 
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.66  E-value=3.1e-16  Score=154.05  Aligned_cols=164  Identities=23%  Similarity=0.416  Sum_probs=78.2

Q ss_pred             CCCCCEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEeeCCcCCCCCCccCCCCCCCcEEE
Q 004275          108 LTFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVLEDNQLVGPLPENLGNLKSLRRIL  187 (764)
Q Consensus       108 L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~  187 (764)
                      +..|++|++++|.++. ++ .+..+++|++|+|++|.+++. + .++.+++|++|++++|++++ +| .+.++++|+.|+
T Consensus        45 L~~L~~L~l~~~~i~~-l~-~l~~l~~L~~L~L~~n~i~~l-~-~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~  118 (210)
T d1h6ta2          45 LNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDI-K-PLANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLS  118 (210)
T ss_dssp             HHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCC-G-GGTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEE
T ss_pred             hcCccEEECcCCCCCC-ch-hHhhCCCCCEEeCCCccccCc-c-ccccCccccccccccccccc-cc-cccccccccccc
Confidence            4455555555555543 22 245555555555555555532 2 23455555555555555542 22 344555555555


Q ss_pred             ccCccCCCCCcccccCCCCCcEEEccCccCCCcCcccccCCCCCCEEeeeCCcCCCCCccchhcCCCCCEEEcCCCCCCC
Q 004275          188 LSSNNFTGSIPESYGNLKNLTEFRIDGSNLTGRIPNFIGNWTKLDRLDLQGTSLEGPIPSTISQLKNLTELRISDLKGSS  267 (764)
Q Consensus       188 Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~n~~~~  267 (764)
                      +++|.+.. + ..+..+++|+.+++++|.+++  +..+..+++|+.+++++|++++                        
T Consensus       119 l~~~~~~~-~-~~l~~l~~l~~l~~~~n~l~~--~~~~~~l~~L~~l~l~~n~l~~------------------------  170 (210)
T d1h6ta2         119 LEHNGISD-I-NGLVHLPQLESLYLGNNKITD--ITVLSRLTKLDTLSLEDNQISD------------------------  170 (210)
T ss_dssp             CTTSCCCC-C-GGGGGCTTCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCC------------------------
T ss_pred             cccccccc-c-ccccccccccccccccccccc--cccccccccccccccccccccc------------------------
Confidence            55554431 1 234444444555544444432  1223344444444444444442                        


Q ss_pred             CCCCCccCCccccccccccccccccCCccccCCCCCCEEecc
Q 004275          268 SSFPNLQDMKKMERLILRNCLITGRIPEYIEDMTDLKILDLS  309 (764)
Q Consensus       268 ~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls  309 (764)
                        ++.+.++++|+.|++++|+++. +| .+..+++|++|+|+
T Consensus       171 --i~~l~~l~~L~~L~Ls~N~i~~-l~-~l~~l~~L~~L~Ls  208 (210)
T d1h6ta2         171 --IVPLAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELF  208 (210)
T ss_dssp             --CGGGTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEEEE
T ss_pred             --cccccCCCCCCEEECCCCCCCC-Ch-hhcCCCCCCEEEcc
Confidence              2224444555555555555552 33 35566666666664


No 18 
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.66  E-value=4e-17  Score=158.22  Aligned_cols=129  Identities=24%  Similarity=0.327  Sum_probs=104.5

Q ss_pred             EEEcCCCcccccCCccCCCCCCCCEEEccCCcCCccC-chhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEeeCC
Q 004275           89 VILLKGFNLAGVIPEEFGNLTFLQEVDLSRNYFNGSL-PKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVLEDN  167 (764)
Q Consensus        89 ~L~L~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N  167 (764)
                      .++.++++++ .+|+.+.  +++++|+|++|.|+..+ +..|..+++|++|+|++|.+....+..+..+++|++|+|++|
T Consensus        12 ~v~Cs~~~L~-~iP~~lp--~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~N   88 (192)
T d1w8aa_          12 TVDCTGRGLK-EIPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGEN   88 (192)
T ss_dssp             EEECTTSCCS-SCCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSC
T ss_pred             EEEEeCCCcC-ccCCCCC--CCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeeeccc
Confidence            5677778877 4676654  67899999999997644 566788899999999999888888888888888999999988


Q ss_pred             cCCCCCCccCCCCCCCcEEEccCccCCCCCcccccCCCCCcEEEccCccCCCc
Q 004275          168 QLVGPLPENLGNLKSLRRILLSSNNFTGSIPESYGNLKNLTEFRIDGSNLTGR  220 (764)
Q Consensus       168 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~  220 (764)
                      +++...|..|.++++|++|+|++|++++..++.|..+++|++|+|++|.+...
T Consensus        89 ~l~~l~~~~F~~l~~L~~L~L~~N~l~~i~~~~f~~l~~L~~l~L~~N~~~~~  141 (192)
T d1w8aa_          89 KIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCN  141 (192)
T ss_dssp             CCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCS
T ss_pred             cccccCHHHHhCCCcccccccCCccccccCHHHhcCCcccccccccccccccc
Confidence            88877777788888888888888888877777788888888888888877643


No 19 
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.65  E-value=6.3e-16  Score=151.86  Aligned_cols=166  Identities=23%  Similarity=0.353  Sum_probs=98.6

Q ss_pred             cCCCCcEEecccCcCcccCCcCcCCCCCCCEEEeeCCcCCCCCCccCCCCCCCcEEEccCccCCCCCcccccCCCCCcEE
Q 004275          131 RLQNLTKLLILGNRLSGSIPLEIGDISTLEELVLEDNQLVGPLPENLGNLKSLRRILLSSNNFTGSIPESYGNLKNLTEF  210 (764)
Q Consensus       131 ~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L  210 (764)
                      .+.+|++|++++|.++.. + .+..+++|++|+|++|++++. + .++++++|++|++++|++++ +|            
T Consensus        44 ~L~~L~~L~l~~~~i~~l-~-~l~~l~~L~~L~L~~n~i~~l-~-~~~~l~~L~~L~l~~n~i~~-l~------------  106 (210)
T d1h6ta2          44 ELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDI-K-PLANLKNLGWLFLDENKVKD-LS------------  106 (210)
T ss_dssp             HHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCC-G-GGTTCTTCCEEECCSSCCCC-GG------------
T ss_pred             HhcCccEEECcCCCCCCc-h-hHhhCCCCCEEeCCCccccCc-c-ccccCccccccccccccccc-cc------------
Confidence            344555555555555422 1 244555555555555555432 2 23455555555555555542 22            


Q ss_pred             EccCccCCCcCcccccCCCCCCEEeeeCCcCCCCCccchhcCCCCCEEEcCCCCCCCCCCCCccCCcccccccccccccc
Q 004275          211 RIDGSNLTGRIPNFIGNWTKLDRLDLQGTSLEGPIPSTISQLKNLTELRISDLKGSSSSFPNLQDMKKMERLILRNCLIT  290 (764)
Q Consensus       211 ~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~N~l~  290 (764)
                                   .+..+++|+.|++++|.+.. + ..+..+++|+.++++.|...  ..+.+..+++|+++++++|+++
T Consensus       107 -------------~l~~l~~L~~L~l~~~~~~~-~-~~l~~l~~l~~l~~~~n~l~--~~~~~~~l~~L~~l~l~~n~l~  169 (210)
T d1h6ta2         107 -------------SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKIT--DITVLSRLTKLDTLSLEDNQIS  169 (210)
T ss_dssp             -------------GGTTCTTCCEEECTTSCCCC-C-GGGGGCTTCCEEECCSSCCC--CCGGGGGCTTCSEEECCSSCCC
T ss_pred             -------------cccccccccccccccccccc-c-cccccccccccccccccccc--cccccccccccccccccccccc
Confidence                         24444555555555554432 1 23455555555555554332  1223455677888888888888


Q ss_pred             ccCCccccCCCCCCEEeccCCCCCCCccccccCCCCCCEEeccC
Q 004275          291 GRIPEYIEDMTDLKILDLSFNQLTGPVPGILQNLKKIDYIFLTN  334 (764)
Q Consensus       291 ~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~  334 (764)
                      +. + .+.++++|+.|++++|+++. +| .+.++++|++|+|++
T Consensus       170 ~i-~-~l~~l~~L~~L~Ls~N~i~~-l~-~l~~l~~L~~L~Ls~  209 (210)
T d1h6ta2         170 DI-V-PLAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELFS  209 (210)
T ss_dssp             CC-G-GGTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEEEEE
T ss_pred             cc-c-cccCCCCCCEEECCCCCCCC-Ch-hhcCCCCCCEEEccC
Confidence            53 3 37899999999999999984 55 589999999999874


No 20 
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.65  E-value=1.6e-16  Score=153.82  Aligned_cols=129  Identities=19%  Similarity=0.307  Sum_probs=90.6

Q ss_pred             CEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccC-CcCcCCCCCCCEEEeeCCcCCCCCCccCCCCCCCcEEEccC
Q 004275          112 QEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSI-PLEIGDISTLEELVLEDNQLVGPLPENLGNLKSLRRILLSS  190 (764)
Q Consensus       112 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~  190 (764)
                      ++++.++++++ .+|..+.  +++++|+|++|++++.+ +..|..+++|++|+|++|.+....+..+..+++|++|+|++
T Consensus        11 ~~v~Cs~~~L~-~iP~~lp--~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~   87 (192)
T d1w8aa_          11 TTVDCTGRGLK-EIPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE   87 (192)
T ss_dssp             TEEECTTSCCS-SCCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred             CEEEEeCCCcC-ccCCCCC--CCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeeecc
Confidence            46778888877 5665542  56777777777776544 44567777777777777777776677777777777777777


Q ss_pred             ccCCCCCcccccCCCCCcEEEccCccCCCcCcccccCCCCCCEEeeeCCcCCC
Q 004275          191 NNFTGSIPESYGNLKNLTEFRIDGSNLTGRIPNFIGNWTKLDRLDLQGTSLEG  243 (764)
Q Consensus       191 N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~  243 (764)
                      |+++...|..|.++++|++|+|++|+|++..|..|..+++|++|+|++|.+..
T Consensus        88 N~l~~l~~~~F~~l~~L~~L~L~~N~l~~i~~~~f~~l~~L~~l~L~~N~~~~  140 (192)
T d1w8aa_          88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNC  140 (192)
T ss_dssp             CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCC
T ss_pred             ccccccCHHHHhCCCcccccccCCccccccCHHHhcCCccccccccccccccc
Confidence            77776666667777777777777777776666666666777777777666653


No 21 
>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.65  E-value=7.5e-17  Score=163.66  Aligned_cols=105  Identities=26%  Similarity=0.462  Sum_probs=92.3

Q ss_pred             cCccccCeeeccCCeeEEEEEEcCCCEEEEEEcCCcChhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEEcccC
Q 004275          659 NNFDAANKIGEGGFGPVYKGTLSDGAVIAVKQLSSKSKQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVYEYLE  738 (764)
Q Consensus       659 ~~~~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~  738 (764)
                      ++|+..+.||+|+||+||+|+.++++.||||+++.... ..++|.+|++++++++|||||+++|+|.+.+..++||||++
T Consensus         4 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~-~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey~~   82 (258)
T d1k2pa_           4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMA   82 (258)
T ss_dssp             CCCCCCCCCCEETTEEEEEEEETTTEEEEEEEEESSSS-CHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEECCT
T ss_pred             HHCEEeEEEecCCCeEEEEEEECCCCEEEEEEECcCcC-CHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEccC
Confidence            56888999999999999999998888999999976433 45789999999999999999999999999999999999999


Q ss_pred             CCcHHHHHhcCCC---------------CCCCHHHHccccC
Q 004275          739 NNSLARALFGNAI---------------TKITYTFSLHLWN  764 (764)
Q Consensus       739 ~GsL~~~L~~~~~---------------~~l~~~~~~~i~h  764 (764)
                      +|+|.+++.....               .++.|.|..+|+|
T Consensus        83 ~g~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~~LH~~~iiH  123 (258)
T d1k2pa_          83 NGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLH  123 (258)
T ss_dssp             TEEHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTBCC
T ss_pred             CCcHHHhhhccccCCcHHHHHHHHHHHHHHHHHHhhcCccc
Confidence            9999999865421               3578888888888


No 22 
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.64  E-value=1e-15  Score=149.01  Aligned_cols=144  Identities=22%  Similarity=0.414  Sum_probs=68.2

Q ss_pred             CCCCCCEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEeeCCcCCCCCCccCCCCCCCcEE
Q 004275          107 NLTFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVLEDNQLVGPLPENLGNLKSLRRI  186 (764)
Q Consensus       107 ~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L  186 (764)
                      .+.+|++|++++|.++. ++ .+..+++|++|++++|++++..|  ++++++|++|++++|.+.. ++ .+.++++|+.|
T Consensus        38 ~l~~l~~L~l~~~~i~~-l~-~l~~l~nL~~L~Ls~N~l~~~~~--l~~l~~L~~L~l~~n~~~~-~~-~l~~l~~L~~L  111 (199)
T d2omxa2          38 DLDQVTTLQADRLGIKS-ID-GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIAD-IT-PLANLTNLTGL  111 (199)
T ss_dssp             HHTTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-CG-GGTTCTTCSEE
T ss_pred             HhcCCCEEECCCCCCCC-cc-ccccCCCcCcCccccccccCccc--ccCCccccccccccccccc-cc-ccccccccccc
Confidence            34455555555555542 22 34555555555555555553222  5555555555555555442 22 24555555555


Q ss_pred             EccCccCCCCCcccccCCCCCcEEEccCccCCCcCcccccCCCCCCEEeeeCCcCCCCCccchhcCCCCCEEEcCC
Q 004275          187 LLSSNNFTGSIPESYGNLKNLTEFRIDGSNLTGRIPNFIGNWTKLDRLDLQGTSLEGPIPSTISQLKNLTELRISD  262 (764)
Q Consensus       187 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~  262 (764)
                      ++++|.+...  ..+..+++|+.|++++|++.. + +.+..+++|+.|++.+|++++. + .++++++|++|++++
T Consensus       112 ~l~~~~~~~~--~~~~~l~~L~~L~l~~n~l~~-~-~~l~~~~~L~~L~l~~n~l~~l-~-~l~~l~~L~~L~ls~  181 (199)
T d2omxa2         112 TLFNNQITDI--DPLKNLTNLNRLELSSNTISD-I-SALSGLTSLQQLNFSSNQVTDL-K-PLANLTTLERLDISS  181 (199)
T ss_dssp             ECCSSCCCCC--GGGTTCTTCSEEECCSSCCCC-C-GGGTTCTTCSEEECCSSCCCCC-G-GGTTCTTCCEEECCS
T ss_pred             cccccccccc--cccchhhhhHHhhhhhhhhcc-c-ccccccccccccccccccccCC-c-cccCCCCCCEEECCC
Confidence            5555554421  224445555555555555442 1 2344445555555555554432 1 134444444444443


No 23 
>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.63  E-value=1.6e-16  Score=164.22  Aligned_cols=106  Identities=23%  Similarity=0.451  Sum_probs=93.9

Q ss_pred             cCccccCeeeccCCeeEEEEE-EcCCCEEEEEEcCCcChhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEEccc
Q 004275          659 NNFDAANKIGEGGFGPVYKGT-LSDGAVIAVKQLSSKSKQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVYEYL  737 (764)
Q Consensus       659 ~~~~~~~~iG~G~~g~Vy~~~-~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~  737 (764)
                      +.|+..+.||+|+||+||+|+ ..+|+.||||++........+.+.+|++++++++|||||++++++.+.+..|+|||||
T Consensus        20 ~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~   99 (293)
T d1yhwa1          20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL   99 (293)
T ss_dssp             TTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             cccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEEEec
Confidence            458888999999999999998 4679999999997654445678999999999999999999999999999999999999


Q ss_pred             CCCcHHHHHhcCCC-------------CCCCHHHHccccC
Q 004275          738 ENNSLARALFGNAI-------------TKITYTFSLHLWN  764 (764)
Q Consensus       738 ~~GsL~~~L~~~~~-------------~~l~~~~~~~i~h  764 (764)
                      ++|+|.+++.+...             .+|.|.|..+|+|
T Consensus       100 ~gg~L~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~iiH  139 (293)
T d1yhwa1         100 AGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIH  139 (293)
T ss_dssp             TTCBHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred             CCCcHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCCcc
Confidence            99999999876431             3689999999998


No 24 
>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.63  E-value=1.3e-16  Score=164.57  Aligned_cols=106  Identities=21%  Similarity=0.427  Sum_probs=92.9

Q ss_pred             cCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcChhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEEccc
Q 004275          659 NNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKSKQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVYEYL  737 (764)
Q Consensus       659 ~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~  737 (764)
                      +.|+..+.||+|+||+||+|+. .+|+.||||++........+.|.+|+++|++++|||||++++++.+.+..++|||||
T Consensus        12 d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmEy~   91 (288)
T d2jfla1          12 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFC   91 (288)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             cCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEecC
Confidence            4578889999999999999995 578999999997765556678999999999999999999999999999999999999


Q ss_pred             CCCcHHHHHhcCCC---------------CCCCHHHHccccC
Q 004275          738 ENNSLARALFGNAI---------------TKITYTFSLHLWN  764 (764)
Q Consensus       738 ~~GsL~~~L~~~~~---------------~~l~~~~~~~i~h  764 (764)
                      ++|+|.+++.+...               .++.|.|..+|+|
T Consensus        92 ~~g~L~~~~~~~~~~l~e~~~~~i~~qi~~gL~ylH~~~ivH  133 (288)
T d2jfla1          92 AGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIH  133 (288)
T ss_dssp             TTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred             CCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEE
Confidence            99999999864221               3588899999988


No 25 
>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.63  E-value=1.1e-16  Score=166.23  Aligned_cols=105  Identities=27%  Similarity=0.502  Sum_probs=85.8

Q ss_pred             CccccCeeeccCCeeEEEEEEc-CC---CEEEEEEcCCc-ChhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEE
Q 004275          660 NFDAANKIGEGGFGPVYKGTLS-DG---AVIAVKQLSSK-SKQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVY  734 (764)
Q Consensus       660 ~~~~~~~iG~G~~g~Vy~~~~~-~g---~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  734 (764)
                      +|+..++||+|+||+||+|+.. ++   ..||||++... .....++|.+|+++|++++|||||+++|+|...+..++||
T Consensus        27 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~iv~  106 (299)
T d1jpaa_          27 CVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIIT  106 (299)
T ss_dssp             GEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred             hcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEEE
Confidence            4556689999999999999863 23   36899998754 3445678999999999999999999999999999999999


Q ss_pred             cccCCCcHHHHHhcCCC---------------CCCCHHHHccccC
Q 004275          735 EYLENNSLARALFGNAI---------------TKITYTFSLHLWN  764 (764)
Q Consensus       735 Ey~~~GsL~~~L~~~~~---------------~~l~~~~~~~i~h  764 (764)
                      |||++|+|.++++....               .++.|.|..+|+|
T Consensus       107 Ey~~~g~L~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiH  151 (299)
T d1jpaa_         107 EFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVH  151 (299)
T ss_dssp             ECCTTEEHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred             EecCCCcceeeeccccCCCCHHHHHHHHHHHHHHHHHHhhCCCcc
Confidence            99999999999886432               2466777777776


No 26 
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.63  E-value=2.5e-15  Score=146.13  Aligned_cols=160  Identities=26%  Similarity=0.449  Sum_probs=135.6

Q ss_pred             eeEEEEEcCCCcccccCCccCCCCCCCCEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEe
Q 004275           85 CHVTVILLKGFNLAGVIPEEFGNLTFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVL  164 (764)
Q Consensus        85 ~~v~~L~L~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L  164 (764)
                      .+++.|+++++++.. + +.+..+++|++|+|++|.+++..|  ++++++|++|++++|.+.. ++ .+.++++|+.|++
T Consensus        40 ~~l~~L~l~~~~i~~-l-~~l~~l~nL~~L~Ls~N~l~~~~~--l~~l~~L~~L~l~~n~~~~-~~-~l~~l~~L~~L~l  113 (199)
T d2omxa2          40 DQVTTLQADRLGIKS-I-DGVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIAD-IT-PLANLTNLTGLTL  113 (199)
T ss_dssp             TTCCEEECTTSCCCC-C-TTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-CG-GGTTCTTCSEEEC
T ss_pred             cCCCEEECCCCCCCC-c-cccccCCCcCcCccccccccCccc--ccCCccccccccccccccc-cc-ccccccccccccc
Confidence            358899999998875 3 347889999999999999986433  8999999999999999873 44 4889999999999


Q ss_pred             eCCcCCCCCCccCCCCCCCcEEEccCccCCCCCcccccCCCCCcEEEccCccCCCcCcccccCCCCCCEEeeeCCcCCCC
Q 004275          165 EDNQLVGPLPENLGNLKSLRRILLSSNNFTGSIPESYGNLKNLTEFRIDGSNLTGRIPNFIGNWTKLDRLDLQGTSLEGP  244 (764)
Q Consensus       165 s~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~  244 (764)
                      ++|.+...  ..+..+++|+.|++++|++.. + +.+..+++|++|++.+|++++. + .++++++|++|++++|+++. 
T Consensus       114 ~~~~~~~~--~~~~~l~~L~~L~l~~n~l~~-~-~~l~~~~~L~~L~l~~n~l~~l-~-~l~~l~~L~~L~ls~N~i~~-  186 (199)
T d2omxa2         114 FNNQITDI--DPLKNLTNLNRLELSSNTISD-I-SALSGLTSLQQLNFSSNQVTDL-K-PLANLTTLERLDISSNKVSD-  186 (199)
T ss_dssp             CSSCCCCC--GGGTTCTTCSEEECCSSCCCC-C-GGGTTCTTCSEEECCSSCCCCC-G-GGTTCTTCCEEECCSSCCCC-
T ss_pred             cccccccc--cccchhhhhHHhhhhhhhhcc-c-ccccccccccccccccccccCC-c-cccCCCCCCEEECCCCCCCC-
Confidence            99988753  358899999999999999973 3 3588999999999999999864 3 48899999999999999985 


Q ss_pred             CccchhcCCCCCEE
Q 004275          245 IPSTISQLKNLTEL  258 (764)
Q Consensus       245 ~p~~l~~l~~L~~L  258 (764)
                      ++ .+.++++|++|
T Consensus       187 i~-~l~~L~~L~~L  199 (199)
T d2omxa2         187 IS-VLAKLTNLESL  199 (199)
T ss_dssp             CG-GGGGCTTCSEE
T ss_pred             Cc-cccCCCCCCcC
Confidence            44 58889998876


No 27 
>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}
Probab=99.62  E-value=3.3e-16  Score=165.94  Aligned_cols=107  Identities=21%  Similarity=0.362  Sum_probs=94.9

Q ss_pred             hcCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcChhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEEcc
Q 004275          658 TNNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKSKQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVYEY  736 (764)
Q Consensus       658 ~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  736 (764)
                      .++|+..+.||+|+||.||+|+. .+|+.||||++........+.+.+|++++++++|||||++++++.+.+..++||||
T Consensus        25 l~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~  104 (350)
T d1koaa2          25 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF  104 (350)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             ccCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEc
Confidence            35688999999999999999995 57899999999876666667899999999999999999999999999999999999


Q ss_pred             cCCCcHHHHHhcCCC---------------CCCCHHHHccccC
Q 004275          737 LENNSLARALFGNAI---------------TKITYTFSLHLWN  764 (764)
Q Consensus       737 ~~~GsL~~~L~~~~~---------------~~l~~~~~~~i~h  764 (764)
                      |++|+|.+++.....               .+|.|.|..+|+|
T Consensus       105 ~~gg~L~~~l~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiH  147 (350)
T d1koaa2         105 MSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVH  147 (350)
T ss_dssp             CCSCBHHHHHTCTTSCBCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred             CCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCee
Confidence            999999999965421               3588999999998


No 28 
>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.61  E-value=1.2e-16  Score=163.15  Aligned_cols=106  Identities=25%  Similarity=0.387  Sum_probs=89.7

Q ss_pred             cCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcCh-hcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEEcc
Q 004275          659 NNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKSK-QGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVYEY  736 (764)
Q Consensus       659 ~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  736 (764)
                      ++|+..+.||+|+||+||+|+. .+|+.||||++..... ...+.|.+|++++++++|||||++++++.+.+..|+||||
T Consensus         5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivmEy   84 (271)
T d1nvra_           5 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY   84 (271)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             cceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEEec
Confidence            5688899999999999999995 5789999999965432 2345799999999999999999999999999999999999


Q ss_pred             cCCCcHHHHHhcCCC--------------CCCCHHHHccccC
Q 004275          737 LENNSLARALFGNAI--------------TKITYTFSLHLWN  764 (764)
Q Consensus       737 ~~~GsL~~~L~~~~~--------------~~l~~~~~~~i~h  764 (764)
                      |++|+|.+++.....              .++.|.|..+|+|
T Consensus        85 ~~gg~L~~~l~~~~~l~e~~~~~i~~qi~~al~ylH~~~IiH  126 (271)
T d1nvra_          85 CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITH  126 (271)
T ss_dssp             CTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred             cCCCcHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCCcc
Confidence            999999999875431              3688899999998


No 29 
>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.61  E-value=1.5e-16  Score=164.13  Aligned_cols=110  Identities=23%  Similarity=0.437  Sum_probs=92.6

Q ss_pred             HHHhhcCccccCeeeccCCeeEEEEEEc-CCCEEEEEEcCCcChhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEE
Q 004275          654 IKAATNNFDAANKIGEGGFGPVYKGTLS-DGAVIAVKQLSSKSKQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLL  732 (764)
Q Consensus       654 ~~~~~~~~~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  732 (764)
                      ++...++|+..+.||+|+||+||+|+.. +|+.||||++.... ...++|.+|+++|++++|||||+++|+|.+.+..++
T Consensus        12 wei~~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~-~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~i   90 (287)
T d1opja_          12 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI   90 (287)
T ss_dssp             TBCCGGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTC-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred             cEecHHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCcc-chHHHHHHHHHHHHhCCCCCEecCCccEeeCCeeEE
Confidence            3334566888899999999999999964 68899999997543 345789999999999999999999999999999999


Q ss_pred             EEcccCCCcHHHHHhcCCC----------------CCCCHHHHccccC
Q 004275          733 VYEYLENNSLARALFGNAI----------------TKITYTFSLHLWN  764 (764)
Q Consensus       733 v~Ey~~~GsL~~~L~~~~~----------------~~l~~~~~~~i~h  764 (764)
                      |||||++|+|.++++....                .++.|.|..+|+|
T Consensus        91 v~E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~~iiH  138 (287)
T d1opja_          91 ITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH  138 (287)
T ss_dssp             EEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred             EeecccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHCCccc
Confidence            9999999999999976432                2477777777777


No 30 
>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.61  E-value=3.4e-16  Score=162.10  Aligned_cols=107  Identities=21%  Similarity=0.351  Sum_probs=92.0

Q ss_pred             hcCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcC------hhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEE
Q 004275          658 TNNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKS------KQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQL  730 (764)
Q Consensus       658 ~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~------~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~  730 (764)
                      .+.|+..+.||+|+||+||+|+. .+|+.||||++....      ....+.|.+|+++|++++|||||++++++.+.+..
T Consensus         9 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~   88 (293)
T d1jksa_           9 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV   88 (293)
T ss_dssp             GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             ccCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEE
Confidence            35688999999999999999995 579999999985422      12357899999999999999999999999999999


Q ss_pred             EEEEcccCCCcHHHHHhcCCC--------------CCCCHHHHccccC
Q 004275          731 LLVYEYLENNSLARALFGNAI--------------TKITYTFSLHLWN  764 (764)
Q Consensus       731 ~lv~Ey~~~GsL~~~L~~~~~--------------~~l~~~~~~~i~h  764 (764)
                      ++|||||++|+|.+++.....              .++.|.|..+|+|
T Consensus        89 ~iv~E~~~gg~L~~~i~~~~~l~~~~~~~~~~qi~~al~yLH~~~ivH  136 (293)
T d1jksa_          89 ILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAH  136 (293)
T ss_dssp             EEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred             EEEEEcCCCccccchhccccccchhHHHHHHHHHHHHHHhhhhcceee
Confidence            999999999999999975421              3588899999988


No 31 
>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.61  E-value=1.2e-16  Score=163.57  Aligned_cols=105  Identities=27%  Similarity=0.453  Sum_probs=87.4

Q ss_pred             hcCccccCeeeccCCeeEEEEEEcCCCEEEEEEcCCcChhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEEccc
Q 004275          658 TNNFDAANKIGEGGFGPVYKGTLSDGAVIAVKQLSSKSKQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVYEYL  737 (764)
Q Consensus       658 ~~~~~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~  737 (764)
                      .++|+..+.||+|+||+||+|++++++.||||+++... ...++|.+|++++++++|||||+++|+|. .+..++|||||
T Consensus        12 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~-~~~~~iv~Ey~   89 (272)
T d1qpca_          12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYM   89 (272)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECC
T ss_pred             HHHeEEeEEEecCCCcEEEEEEECCCCEEEEEEEccCc-CCHHHHHHHHHHHHhCCCCCEeEEEeeec-cCCeEEEEEeC
Confidence            45688889999999999999999888899999997543 34578999999999999999999999885 46679999999


Q ss_pred             CCCcHHHHHhcCCC----------------CCCCHHHHccccC
Q 004275          738 ENNSLARALFGNAI----------------TKITYTFSLHLWN  764 (764)
Q Consensus       738 ~~GsL~~~L~~~~~----------------~~l~~~~~~~i~h  764 (764)
                      ++|+|.++++....                .++.|.|..+|+|
T Consensus        90 ~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~ivH  132 (272)
T d1qpca_          90 ENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIH  132 (272)
T ss_dssp             TTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred             CCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Confidence            99999998865322                2466667777776


No 32 
>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.60  E-value=6.1e-16  Score=159.21  Aligned_cols=105  Identities=26%  Similarity=0.435  Sum_probs=84.5

Q ss_pred             cCccccCe-eeccCCeeEEEEEEc---CCCEEEEEEcCCcC-hhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEE
Q 004275          659 NNFDAANK-IGEGGFGPVYKGTLS---DGAVIAVKQLSSKS-KQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLV  733 (764)
Q Consensus       659 ~~~~~~~~-iG~G~~g~Vy~~~~~---~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv  733 (764)
                      +++...++ ||+|+||+||+|+.+   ++..||||++.... ....++|.+|+++|++++|||||+++|+|. .+..|+|
T Consensus         8 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~-~~~~~lv   86 (285)
T d1u59a_           8 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ-AEALMLV   86 (285)
T ss_dssp             GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-SSSEEEE
T ss_pred             cCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeec-cCeEEEE
Confidence            44556664 999999999999853   45579999997543 344678999999999999999999999986 4568999


Q ss_pred             EcccCCCcHHHHHhcCCC---------------CCCCHHHHccccC
Q 004275          734 YEYLENNSLARALFGNAI---------------TKITYTFSLHLWN  764 (764)
Q Consensus       734 ~Ey~~~GsL~~~L~~~~~---------------~~l~~~~~~~i~h  764 (764)
                      ||||++|+|.+++.....               .++.|.|..+|+|
T Consensus        87 mE~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~ylH~~~iiH  132 (285)
T d1u59a_          87 MEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVH  132 (285)
T ss_dssp             EECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred             EEeCCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence            999999999999865432               2467777777777


No 33 
>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.60  E-value=3.3e-16  Score=159.27  Aligned_cols=106  Identities=24%  Similarity=0.437  Sum_probs=91.9

Q ss_pred             cCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcC---hhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEE
Q 004275          659 NNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKS---KQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVY  734 (764)
Q Consensus       659 ~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  734 (764)
                      ++|+..+.||+|+||+||+|+. .+|+.||||++....   ....+.+.+|++++++++|||||++++++.+.+..|+||
T Consensus         6 ~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ivm   85 (263)
T d2j4za1           6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLIL   85 (263)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEEEEE
Confidence            4588889999999999999996 578999999986432   223567999999999999999999999999999999999


Q ss_pred             cccCCCcHHHHHhcCCC--------------CCCCHHHHccccC
Q 004275          735 EYLENNSLARALFGNAI--------------TKITYTFSLHLWN  764 (764)
Q Consensus       735 Ey~~~GsL~~~L~~~~~--------------~~l~~~~~~~i~h  764 (764)
                      |||++|+|.+++.....              .++.|.|..+|+|
T Consensus        86 Ey~~~g~L~~~l~~~~~l~e~~~~~i~~qi~~al~~lH~~~ivH  129 (263)
T d2j4za1          86 EYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH  129 (263)
T ss_dssp             ECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred             eecCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCeee
Confidence            99999999999975321              3689999999998


No 34 
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.59  E-value=1.2e-13  Score=145.87  Aligned_cols=246  Identities=22%  Similarity=0.298  Sum_probs=152.4

Q ss_pred             CCCCEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEeeCCcCCCCCCccCCCCCCCcEEEc
Q 004275          109 TFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVLEDNQLVGPLPENLGNLKSLRRILL  188 (764)
Q Consensus       109 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L  188 (764)
                      .+|++|||++|.++ .+|+.   +++|++|+|++|+++ .+|..+   .+|+.|++++|.++ .++. +  .+.|++|++
T Consensus        38 ~~l~~LdLs~~~L~-~lp~~---~~~L~~L~Ls~N~l~-~lp~~~---~~L~~L~l~~n~l~-~l~~-l--p~~L~~L~L  105 (353)
T d1jl5a_          38 RQAHELELNNLGLS-SLPEL---PPHLESLVASCNSLT-ELPELP---QSLKSLLVDNNNLK-ALSD-L--PPLLEYLGV  105 (353)
T ss_dssp             HTCSEEECTTSCCS-CCCSC---CTTCSEEECCSSCCS-SCCCCC---TTCCEEECCSSCCS-CCCS-C--CTTCCEEEC
T ss_pred             cCCCEEEeCCCCCC-CCCCC---CCCCCEEECCCCCCc-ccccch---hhhhhhhhhhcccc-hhhh-h--ccccccccc
Confidence            36899999999998 57863   578999999999998 778654   57899999999987 3432 1  146999999


Q ss_pred             cCccCCCCCcccccCCCCCcEEEccCccCCCcCcccccCCCCCCEEeeeCCcCCCCCccchhcCCCCCEEEcCCCCCCC-
Q 004275          189 SSNNFTGSIPESYGNLKNLTEFRIDGSNLTGRIPNFIGNWTKLDRLDLQGTSLEGPIPSTISQLKNLTELRISDLKGSS-  267 (764)
Q Consensus       189 s~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~n~~~~-  267 (764)
                      ++|.+. .+|. ++.+++|+.|++++|.+....+ .   ...+..+.+..+....  +..+..++.++.|++..+.... 
T Consensus       106 ~~n~l~-~lp~-~~~l~~L~~L~l~~~~~~~~~~-~---~~~l~~l~~~~~~~~~--~~~l~~l~~l~~L~l~~n~~~~~  177 (353)
T d1jl5a_         106 SNNQLE-KLPE-LQNSSFLKIIDVDNNSLKKLPD-L---PPSLEFIAAGNNQLEE--LPELQNLPFLTAIYADNNSLKKL  177 (353)
T ss_dssp             CSSCCS-SCCC-CTTCTTCCEEECCSSCCSCCCC-C---CTTCCEEECCSSCCSS--CCCCTTCTTCCEEECCSSCCSSC
T ss_pred             cccccc-cccc-hhhhccceeecccccccccccc-c---cccccchhhccccccc--cccccccccceeccccccccccc
Confidence            999998 4664 6889999999999998864322 1   2333444443333221  2223344444444444322111 


Q ss_pred             -----------------CCCCCccCCccccccccccccccccCCccc-----------------cCCCCCCEEeccCCCC
Q 004275          268 -----------------SSFPNLQDMKKMERLILRNCLITGRIPEYI-----------------EDMTDLKILDLSFNQL  313 (764)
Q Consensus       268 -----------------~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~-----------------~~l~~L~~L~Ls~N~l  313 (764)
                                       ..++.+..++.|+.+++++|.... +|...                 .....+...++..|.+
T Consensus       178 ~~~~~~~~~l~~~~~~~~~~~~~~~l~~L~~l~l~~n~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  256 (353)
T d1jl5a_         178 PDLPLSLESIVAGNNILEELPELQNLPFLTTIYADNNLLKT-LPDLPPSLEALNVRDNYLTDLPELPQSLTFLDVSENIF  256 (353)
T ss_dssp             CCCCTTCCEEECCSSCCSSCCCCTTCTTCCEEECCSSCCSS-CCSCCTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCC
T ss_pred             ccccccccccccccccccccccccccccccccccccccccc-cccccccccccccccccccccccccccccccccccccc
Confidence                             122334445566666666655442 22111                 1122334444444333


Q ss_pred             CC----------------CccccccCCCCCCEEeccCCcCcCCCChhhhcCCCeEEeecCcCCCCCCcccccc-cceeec
Q 004275          314 TG----------------PVPGILQNLKKIDYIFLTNNSLSGTLPDWILTSEKNLDLSYNNFTESSPATCRES-RVNILS  376 (764)
Q Consensus       314 ~g----------------~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~l~~L~Ls~N~l~~~~p~~~~~~-~l~~~~  376 (764)
                      .+                .++.....+++|++|++++|+|+ .+|.. .++++.|+|++|+|+.. |..+..+ .+++..
T Consensus       257 ~~l~~l~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~-~~~L~~L~L~~N~L~~l-~~~~~~L~~L~L~~  333 (353)
T d1jl5a_         257 SGLSELPPNLYYLNASSNEIRSLCDLPPSLEELNVSNNKLI-ELPAL-PPRLERLIASFNHLAEV-PELPQNLKQLHVEY  333 (353)
T ss_dssp             SEESCCCTTCCEEECCSSCCSEECCCCTTCCEEECCSSCCS-CCCCC-CTTCCEEECCSSCCSCC-CCCCTTCCEEECCS
T ss_pred             cccccccchhcccccccCccccccccCCCCCEEECCCCccC-ccccc-cCCCCEEECCCCcCCcc-ccccCCCCEEECcC
Confidence            21                11122233578999999999998 57754 46788999999999854 4444444 466655


Q ss_pred             cc
Q 004275          377 SF  378 (764)
Q Consensus       377 ~~  378 (764)
                      |.
T Consensus       334 N~  335 (353)
T d1jl5a_         334 NP  335 (353)
T ss_dssp             SC
T ss_pred             Cc
Confidence            54


No 35 
>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.59  E-value=2.6e-16  Score=161.32  Aligned_cols=104  Identities=28%  Similarity=0.461  Sum_probs=86.7

Q ss_pred             hcCccccCeeeccCCeeEEEEEEcCCCEEEEEEcCCc--ChhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEEc
Q 004275          658 TNNFDAANKIGEGGFGPVYKGTLSDGAVIAVKQLSSK--SKQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVYE  735 (764)
Q Consensus       658 ~~~~~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  735 (764)
                      .++|...+.||+|+||+||+|+++  ..||||+++..  .....++|.+|++++++++|||||+++|++. .+..++|||
T Consensus         7 ~~~~~~~~~lG~G~fg~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~-~~~~~lv~E   83 (276)
T d1uwha_           7 DGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-APQLAIVTQ   83 (276)
T ss_dssp             TTCCCCCSEEEECSSCEEEEEESS--SEEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEE
T ss_pred             cccEEEEEEEeeCCCcEEEEEEEC--CEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEe-ccEEEEEEe
Confidence            456888899999999999999864  36999999653  3344678999999999999999999999985 456899999


Q ss_pred             ccCCCcHHHHHhcCCC---------------CCCCHHHHccccC
Q 004275          736 YLENNSLARALFGNAI---------------TKITYTFSLHLWN  764 (764)
Q Consensus       736 y~~~GsL~~~L~~~~~---------------~~l~~~~~~~i~h  764 (764)
                      ||++|+|.++++....               .++.|.|..+|+|
T Consensus        84 y~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~ivH  127 (276)
T d1uwha_          84 WCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIH  127 (276)
T ss_dssp             CCCEEEHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred             cCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHhcCCEec
Confidence            9999999999975432               2577888888887


No 36 
>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.59  E-value=2.5e-16  Score=165.39  Aligned_cols=107  Identities=19%  Similarity=0.343  Sum_probs=92.2

Q ss_pred             hcCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcC-hhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEEc
Q 004275          658 TNNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKS-KQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVYE  735 (764)
Q Consensus       658 ~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  735 (764)
                      .++|+..+.||+|+||+||+|+. .+|+.||||+++... ....+.+.+|+++|++++|||||+++++|.+.+..++|||
T Consensus         5 ~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iVmE   84 (322)
T d1s9ja_           5 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME   84 (322)
T ss_dssp             GGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             ccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEE
Confidence            46788999999999999999995 578999999996542 3335679999999999999999999999999999999999


Q ss_pred             ccCCCcHHHHHhcCCC--------------CCCCHHHH-ccccC
Q 004275          736 YLENNSLARALFGNAI--------------TKITYTFS-LHLWN  764 (764)
Q Consensus       736 y~~~GsL~~~L~~~~~--------------~~l~~~~~-~~i~h  764 (764)
                      ||++|+|.+++++...              .++.|.|. .+|+|
T Consensus        85 y~~gg~L~~~l~~~~~l~~~~~~~~~~qil~aL~yLH~~~~IiH  128 (322)
T d1s9ja_          85 HMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMH  128 (322)
T ss_dssp             CCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_pred             cCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCEEc
Confidence            9999999999975421              36889985 58998


No 37 
>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}
Probab=99.59  E-value=7.9e-16  Score=163.14  Aligned_cols=106  Identities=19%  Similarity=0.354  Sum_probs=93.6

Q ss_pred             cCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcChhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEEccc
Q 004275          659 NNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKSKQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVYEYL  737 (764)
Q Consensus       659 ~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~  737 (764)
                      +.|+..+.||+|+||.||+|+. .+|+.||||++........+.+.+|++++++++|||||++++++.+.+..|+|||||
T Consensus        29 d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~  108 (352)
T d1koba_          29 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFL  108 (352)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECC
T ss_pred             cceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcC
Confidence            4688999999999999999994 679999999997765555678899999999999999999999999999999999999


Q ss_pred             CCCcHHHHHhcCCC---------------CCCCHHHHccccC
Q 004275          738 ENNSLARALFGNAI---------------TKITYTFSLHLWN  764 (764)
Q Consensus       738 ~~GsL~~~L~~~~~---------------~~l~~~~~~~i~h  764 (764)
                      ++|+|.+++.....               .+|.|.|..+|+|
T Consensus       109 ~gg~L~~~~~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiH  150 (352)
T d1koba_         109 SGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVH  150 (352)
T ss_dssp             CCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred             CCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeee
Confidence            99999998865431               3588999999998


No 38 
>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.58  E-value=5.9e-16  Score=161.10  Aligned_cols=107  Identities=20%  Similarity=0.362  Sum_probs=88.2

Q ss_pred             hcCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcCh-hcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEEc
Q 004275          658 TNNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKSK-QGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVYE  735 (764)
Q Consensus       658 ~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  735 (764)
                      .+.|+..+.||+|+||+||+|+. .+|+.||||++..... ...+.+.+|+++|++++|||||++++++.+.+..|+|||
T Consensus         8 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lvmE   87 (307)
T d1a06a_           8 RDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQ   87 (307)
T ss_dssp             GGTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             ccceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence            45588899999999999999995 5789999999965432 234568899999999999999999999999999999999


Q ss_pred             ccCCCcHHHHHhcCCC--------------CCCCHHHHccccC
Q 004275          736 YLENNSLARALFGNAI--------------TKITYTFSLHLWN  764 (764)
Q Consensus       736 y~~~GsL~~~L~~~~~--------------~~l~~~~~~~i~h  764 (764)
                      ||++|+|.+++.....              .++.|.|..+|+|
T Consensus        88 ~~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiH  130 (307)
T d1a06a_          88 LVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVH  130 (307)
T ss_dssp             CCCSCBHHHHHHTCSCCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred             ccCCCcHHHhhhcccCCCHHHHHHHHHHHHHHHHhhhhceeee
Confidence            9999999999976532              3588899999998


No 39 
>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.58  E-value=1.6e-15  Score=158.88  Aligned_cols=106  Identities=17%  Similarity=0.301  Sum_probs=92.3

Q ss_pred             hcCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcChhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEEcc
Q 004275          658 TNNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKSKQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVYEY  736 (764)
Q Consensus       658 ~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  736 (764)
                      .+.|...+.||+|+||+||+|.. .+|+.||||.+..... ....+.+|+++|++++|||||++++++.+.+..|+||||
T Consensus         4 ~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~~-~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvmE~   82 (321)
T d1tkia_           4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGT-DQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF   82 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTH-HHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCcc-cHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEec
Confidence            35688899999999999999995 5788999999976543 345688999999999999999999999999999999999


Q ss_pred             cCCCcHHHHHhcCCC---------------CCCCHHHHccccC
Q 004275          737 LENNSLARALFGNAI---------------TKITYTFSLHLWN  764 (764)
Q Consensus       737 ~~~GsL~~~L~~~~~---------------~~l~~~~~~~i~h  764 (764)
                      |++|+|.+++.....               .++.|.|..+|+|
T Consensus        83 ~~gg~L~~~i~~~~~~l~e~~~~~i~~qi~~al~yLH~~~iiH  125 (321)
T d1tkia_          83 ISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGH  125 (321)
T ss_dssp             CCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred             CCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCc
Confidence            999999999975431               3588999999998


No 40 
>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.58  E-value=4.9e-16  Score=160.06  Aligned_cols=106  Identities=21%  Similarity=0.297  Sum_probs=92.0

Q ss_pred             cCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcC---hhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEE
Q 004275          659 NNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKS---KQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVY  734 (764)
Q Consensus       659 ~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  734 (764)
                      ++|+..+.||+|+||+||+|+. .+|+.||||++....   ....+.+.+|++++++++|||||++++++.+.+..|+||
T Consensus         8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivm   87 (288)
T d1uu3a_           8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL   87 (288)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEEE
T ss_pred             CCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEEEE
Confidence            4588999999999999999995 578999999996432   223567999999999999999999999999999999999


Q ss_pred             cccCCCcHHHHHhcCCC--------------CCCCHHHHccccC
Q 004275          735 EYLENNSLARALFGNAI--------------TKITYTFSLHLWN  764 (764)
Q Consensus       735 Ey~~~GsL~~~L~~~~~--------------~~l~~~~~~~i~h  764 (764)
                      |||++|+|.+++.....              .++.|.|+.+|+|
T Consensus        88 Ey~~gg~L~~~~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiH  131 (288)
T d1uu3a_          88 SYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIH  131 (288)
T ss_dssp             CCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred             EccCCCCHHHhhhccCCCCHHHHHHHHHHHHHHHHhhccccEEc
Confidence            99999999999875421              3689999999998


No 41 
>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.57  E-value=1.4e-15  Score=155.78  Aligned_cols=99  Identities=25%  Similarity=0.390  Sum_probs=80.2

Q ss_pred             CeeeccCCeeEEEEEEcC---CCEEEEEEcCCcC--hhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEEcccCC
Q 004275          665 NKIGEGGFGPVYKGTLSD---GAVIAVKQLSSKS--KQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVYEYLEN  739 (764)
Q Consensus       665 ~~iG~G~~g~Vy~~~~~~---g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~~~  739 (764)
                      +.||+|+||+||+|.+++   ++.||||+++...  ....++|.+|+++|++++|||||+++|+|. .+..++|||||++
T Consensus        13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~-~~~~~lvmE~~~~   91 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAEL   91 (277)
T ss_dssp             EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEE-SSSEEEEEECCTT
T ss_pred             CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEec-cCCEEEEEEcCCC
Confidence            579999999999998643   4579999996532  233568999999999999999999999995 4567899999999


Q ss_pred             CcHHHHHhcCCC--------------CCCCHHHHccccC
Q 004275          740 NSLARALFGNAI--------------TKITYTFSLHLWN  764 (764)
Q Consensus       740 GsL~~~L~~~~~--------------~~l~~~~~~~i~h  764 (764)
                      |+|.++++....              .++.|.|..+|+|
T Consensus        92 g~L~~~l~~~~~l~~~~~~~i~~qi~~gl~ylH~~~iiH  130 (277)
T d1xbba_          92 GPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVH  130 (277)
T ss_dssp             EEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred             CcHHHHHhhccCCCHHHHHHHHHHHHHHHhhHHhCCccc
Confidence            999999986532              3577777777777


No 42 
>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.57  E-value=6.1e-16  Score=159.10  Aligned_cols=90  Identities=29%  Similarity=0.527  Sum_probs=79.1

Q ss_pred             hcCccccCeeeccCCeeEEEEEEcCCCEEEEEEcCCcChhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEEccc
Q 004275          658 TNNFDAANKIGEGGFGPVYKGTLSDGAVIAVKQLSSKSKQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVYEYL  737 (764)
Q Consensus       658 ~~~~~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~  737 (764)
                      .++|+..+.||+|+||.||+|+.++++.||||++.... ...++|.+|+.++++++|||||+++|+|. .++.++|||||
T Consensus        16 ~~~~~i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~~-~~~~~~~~E~~~l~~l~h~nIv~~~g~~~-~~~~~lv~Ey~   93 (285)
T d1fmka3          16 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYM   93 (285)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEECCC
T ss_pred             HHHEEEeeEEeeCCCeEEEEEEECCCCEEEEEEECccc-CCHHHHHHHHHHHHhcccCCEeEEEEEEe-cCCeEEEEEec
Confidence            35688899999999999999999888899999997543 34578999999999999999999999985 56789999999


Q ss_pred             CCCcHHHHHhcC
Q 004275          738 ENNSLARALFGN  749 (764)
Q Consensus       738 ~~GsL~~~L~~~  749 (764)
                      ++|+|..+++.+
T Consensus        94 ~~g~l~~~~~~~  105 (285)
T d1fmka3          94 SKGSLLDFLKGE  105 (285)
T ss_dssp             TTCBHHHHHSHH
T ss_pred             CCCchhhhhhhc
Confidence            999999998754


No 43 
>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.56  E-value=1.4e-15  Score=158.30  Aligned_cols=105  Identities=24%  Similarity=0.431  Sum_probs=89.7

Q ss_pred             CccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcCh---hcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEEc
Q 004275          660 NFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKSK---QGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVYE  735 (764)
Q Consensus       660 ~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  735 (764)
                      .|+..+.||+|+||+||+|+. .+|+.||||++.....   ...+.|.+|+++|++++|||||++++++.+.+..|+|||
T Consensus        16 ~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv~E   95 (309)
T d1u5ra_          16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME   95 (309)
T ss_dssp             HEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             hcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEEEE
Confidence            388889999999999999984 6788999999965432   234679999999999999999999999999999999999


Q ss_pred             ccCCCcHHHHHhcCCC--------------CCCCHHHHccccC
Q 004275          736 YLENNSLARALFGNAI--------------TKITYTFSLHLWN  764 (764)
Q Consensus       736 y~~~GsL~~~L~~~~~--------------~~l~~~~~~~i~h  764 (764)
                      ||++|+|..++.....              .+|.|.|..+|+|
T Consensus        96 ~~~~g~l~~~~~~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiH  138 (309)
T d1u5ra_          96 YCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIH  138 (309)
T ss_dssp             CCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBC
T ss_pred             ecCCCchHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEec
Confidence            9999999877654321              3688999999998


No 44 
>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=99.56  E-value=1.5e-15  Score=155.53  Aligned_cols=106  Identities=16%  Similarity=0.251  Sum_probs=90.4

Q ss_pred             cCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcCh---------hcHHHHHHHHHHHHhCC-CCCccceEEEEEEC
Q 004275          659 NNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKSK---------QGNREFVNEIGMISALQ-HQNLVKLYGCCIEG  727 (764)
Q Consensus       659 ~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~---------~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~  727 (764)
                      ++|+..+.||+|+||+||+|+. .+|+.||||++.....         ...+.+.+|++++++++ |||||++++++.+.
T Consensus         3 ~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~   82 (277)
T d1phka_           3 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETN   82 (277)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECS
T ss_pred             ccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecccC
Confidence            5688899999999999999984 6789999999865321         11246889999999997 99999999999999


Q ss_pred             CEEEEEEcccCCCcHHHHHhcCCC--------------CCCCHHHHccccC
Q 004275          728 NQLLLVYEYLENNSLARALFGNAI--------------TKITYTFSLHLWN  764 (764)
Q Consensus       728 ~~~~lv~Ey~~~GsL~~~L~~~~~--------------~~l~~~~~~~i~h  764 (764)
                      +..|+|||||++|+|.++|..+..              .++.|.|..+|+|
T Consensus        83 ~~~~ivmE~~~~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~ivH  133 (277)
T d1phka_          83 TFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVH  133 (277)
T ss_dssp             SEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred             cceEEEEEcCCCchHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCcc
Confidence            999999999999999999975432              3588888888888


No 45 
>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.55  E-value=2e-15  Score=154.05  Aligned_cols=103  Identities=24%  Similarity=0.390  Sum_probs=85.5

Q ss_pred             cccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCc--ChhcHHHHHHHHHHHHhCCCCCccceEEEEEE----CCEEEEEE
Q 004275          662 DAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSK--SKQGNREFVNEIGMISALQHQNLVKLYGCCIE----GNQLLLVY  734 (764)
Q Consensus       662 ~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~----~~~~~lv~  734 (764)
                      +..+.||+|+||+||+|+. .+++.||||++...  .....+.|.+|+++|++++|||||++++++..    ....++||
T Consensus        12 ~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~ivm   91 (270)
T d1t4ha_          12 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT   91 (270)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEE
T ss_pred             EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEEE
Confidence            5566899999999999995 56889999998653  33345679999999999999999999999875    34579999


Q ss_pred             cccCCCcHHHHHhcCCC--------------CCCCHHHHcc--ccC
Q 004275          735 EYLENNSLARALFGNAI--------------TKITYTFSLH--LWN  764 (764)
Q Consensus       735 Ey~~~GsL~~~L~~~~~--------------~~l~~~~~~~--i~h  764 (764)
                      |||++|+|.+++.....              .+++|.|..+  |+|
T Consensus        92 E~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~gl~yLH~~~~~IiH  137 (270)
T d1t4ha_          92 ELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIH  137 (270)
T ss_dssp             ECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCC
T ss_pred             eCCCCCcHHHHHhccccccHHHHHHHHHHHHHHHHHHHHCCCCEEe
Confidence            99999999999975321              3578888887  888


No 46 
>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.55  E-value=8.1e-16  Score=156.23  Aligned_cols=103  Identities=28%  Similarity=0.478  Sum_probs=84.3

Q ss_pred             cCccccCeeeccCCeeEEEEEEcCCCEEEEEEcCCcChhcHHHHHHHHHHHHhCCCCCccceEEEEEEC-CEEEEEEccc
Q 004275          659 NNFDAANKIGEGGFGPVYKGTLSDGAVIAVKQLSSKSKQGNREFVNEIGMISALQHQNLVKLYGCCIEG-NQLLLVYEYL  737 (764)
Q Consensus       659 ~~~~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~-~~~~lv~Ey~  737 (764)
                      ++|+..+.||+|+||.||+|.. .|..||||+++...  ..++|.+|++++++++|||||+++|+|.+. +..++||||+
T Consensus         7 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~vAvK~i~~~~--~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~ey~   83 (262)
T d1byga_           7 KELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM   83 (262)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCC
T ss_pred             HHeEEeEEEecCCCeEEEEEEE-CCeEEEEEEECcHH--HHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEEEecc
Confidence            4577888999999999999998 47889999996542  346899999999999999999999999654 5579999999


Q ss_pred             CCCcHHHHHhcCCC----------------CCCCHHHHccccC
Q 004275          738 ENNSLARALFGNAI----------------TKITYTFSLHLWN  764 (764)
Q Consensus       738 ~~GsL~~~L~~~~~----------------~~l~~~~~~~i~h  764 (764)
                      ++|+|.++|+....                .++.|.|..+|+|
T Consensus        84 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~~ivH  126 (262)
T d1byga_          84 AKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVH  126 (262)
T ss_dssp             TTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred             CCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccCceec
Confidence            99999999975421                3466777777776


No 47 
>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.54  E-value=4.1e-15  Score=152.99  Aligned_cols=106  Identities=25%  Similarity=0.497  Sum_probs=88.1

Q ss_pred             cCccccCeeeccCCeeEEEEEEcCC-----CEEEEEEcCCcC-hhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEE
Q 004275          659 NNFDAANKIGEGGFGPVYKGTLSDG-----AVIAVKQLSSKS-KQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLL  732 (764)
Q Consensus       659 ~~~~~~~~iG~G~~g~Vy~~~~~~g-----~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  732 (764)
                      ++|+..++||+|+||.||+|.++..     ..||||++.... .....+|.+|++++++++|||||+++|+|.+.+..++
T Consensus         7 ~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~~~   86 (283)
T d1mqba_           7 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI   86 (283)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCceEE
Confidence            5688899999999999999996532     379999997543 3345679999999999999999999999999999999


Q ss_pred             EEcccCCCcHHHHHhcCCC---------------CCCCHHHHccccC
Q 004275          733 VYEYLENNSLARALFGNAI---------------TKITYTFSLHLWN  764 (764)
Q Consensus       733 v~Ey~~~GsL~~~L~~~~~---------------~~l~~~~~~~i~h  764 (764)
                      |||||++|++.+++.....               .++.|.|..+|+|
T Consensus        87 v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~gl~~lH~~~iiH  133 (283)
T d1mqba_          87 ITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVH  133 (283)
T ss_dssp             EEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred             EEEecccCcchhhhhcccccccHHHHHHHHHHHHHhhhhcccccccc
Confidence            9999999999998875431               2467777777777


No 48 
>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.54  E-value=2.3e-15  Score=158.43  Aligned_cols=106  Identities=25%  Similarity=0.293  Sum_probs=93.1

Q ss_pred             cCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcC---hhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEE
Q 004275          659 NNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKS---KQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVY  734 (764)
Q Consensus       659 ~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  734 (764)
                      ++|+..+.||+|+||.||+|+. .+|+.||||++.+..   ....+.+.+|+++|++++|||||++++++.+.+..|+||
T Consensus         5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~iv~   84 (337)
T d1o6la_           5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM   84 (337)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeeccccccccce
Confidence            5688999999999999999994 689999999996532   234577899999999999999999999999999999999


Q ss_pred             cccCCCcHHHHHhcCCC--------------CCCCHHHHccccC
Q 004275          735 EYLENNSLARALFGNAI--------------TKITYTFSLHLWN  764 (764)
Q Consensus       735 Ey~~~GsL~~~L~~~~~--------------~~l~~~~~~~i~h  764 (764)
                      |||++|+|.+++.....              .++.|.|+.+|+|
T Consensus        85 ey~~gg~L~~~~~~~~~~~e~~~~~~~~qil~al~ylH~~~iiH  128 (337)
T d1o6la_          85 EYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVY  128 (337)
T ss_dssp             ECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBC
T ss_pred             eccCCCchhhhhhcccCCcHHHHHHHHHHHhhhhhhhhhcCccc
Confidence            99999999999976432              3689999999998


No 49 
>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.53  E-value=2.1e-15  Score=156.65  Aligned_cols=97  Identities=28%  Similarity=0.534  Sum_probs=84.2

Q ss_pred             HHHHHhhcCccccCeeeccCCeeEEEEEEc------CCCEEEEEEcCCcC-hhcHHHHHHHHHHHHhCCCCCccceEEEE
Q 004275          652 RQIKAATNNFDAANKIGEGGFGPVYKGTLS------DGAVIAVKQLSSKS-KQGNREFVNEIGMISALQHQNLVKLYGCC  724 (764)
Q Consensus       652 ~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~------~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~  724 (764)
                      .+++..+++|+..+.||+|+||+||+|+..      +++.||||++.... ....++|.+|++++++++||||++++++|
T Consensus         6 ~~~e~p~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~   85 (301)
T d1lufa_           6 LSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVC   85 (301)
T ss_dssp             HHTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             hhccCCHHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeee
Confidence            345556778999999999999999999864      35689999997543 33457899999999999999999999999


Q ss_pred             EECCEEEEEEcccCCCcHHHHHhc
Q 004275          725 IEGNQLLLVYEYLENNSLARALFG  748 (764)
Q Consensus       725 ~~~~~~~lv~Ey~~~GsL~~~L~~  748 (764)
                      ...+..++|||||++|+|.++++.
T Consensus        86 ~~~~~~~~v~e~~~~g~L~~~l~~  109 (301)
T d1lufa_          86 AVGKPMCLLFEYMAYGDLNEFLRS  109 (301)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHH
T ss_pred             ccCCceEEEEEecCCCcHHHHHHh
Confidence            999999999999999999999975


No 50 
>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.52  E-value=3.5e-15  Score=155.78  Aligned_cols=106  Identities=21%  Similarity=0.348  Sum_probs=92.1

Q ss_pred             cCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcC---hhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEE
Q 004275          659 NNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKS---KQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVY  734 (764)
Q Consensus       659 ~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  734 (764)
                      ++|+..+.||+|+||+||+|+. .+|+.||||++....   ....+.+.+|++++++++|||||++++++.+.+..|+||
T Consensus         4 ~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivm   83 (316)
T d1fota_           4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM   83 (316)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred             hHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeeeEe
Confidence            4688899999999999999995 579999999996432   234578999999999999999999999999999999999


Q ss_pred             cccCCCcHHHHHhcCCC--------------CCCCHHHHccccC
Q 004275          735 EYLENNSLARALFGNAI--------------TKITYTFSLHLWN  764 (764)
Q Consensus       735 Ey~~~GsL~~~L~~~~~--------------~~l~~~~~~~i~h  764 (764)
                      |||++|+|.+++.....              .++.+.|+.+|+|
T Consensus        84 E~~~gg~l~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~iiH  127 (316)
T d1fota_          84 DYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIY  127 (316)
T ss_dssp             CCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEEC
T ss_pred             eecCCccccccccccccccccHHHHHHHHHHHhhhhhccCcEEc
Confidence            99999999999876532              3588999999998


No 51 
>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.52  E-value=1.4e-14  Score=150.94  Aligned_cols=101  Identities=27%  Similarity=0.444  Sum_probs=82.8

Q ss_pred             cCeeeccCCeeEEEEEEcCC----CEEEEEEcCC-cChhcHHHHHHHHHHHHhCCCCCccceEEEEEEC-CEEEEEEccc
Q 004275          664 ANKIGEGGFGPVYKGTLSDG----AVIAVKQLSS-KSKQGNREFVNEIGMISALQHQNLVKLYGCCIEG-NQLLLVYEYL  737 (764)
Q Consensus       664 ~~~iG~G~~g~Vy~~~~~~g----~~vAvK~l~~-~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~-~~~~lv~Ey~  737 (764)
                      .++||+|+||+||+|++.+.    ..||||+++. ......++|.+|+++|++++|||||+++|+|.+. +..++|||||
T Consensus        32 ~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E~~  111 (311)
T d1r0pa_          32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM  111 (311)
T ss_dssp             EEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEECC
T ss_pred             ceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEEEEe
Confidence            57899999999999996432    3689999975 3444567899999999999999999999999874 5889999999


Q ss_pred             CCCcHHHHHhcCCC---------------CCCCHHHHccccC
Q 004275          738 ENNSLARALFGNAI---------------TKITYTFSLHLWN  764 (764)
Q Consensus       738 ~~GsL~~~L~~~~~---------------~~l~~~~~~~i~h  764 (764)
                      ++|+|.++++....               .++.+.|..+|+|
T Consensus       112 ~~g~l~~~~~~~~~~~~~~~~~~i~~qia~gL~~lH~~~iiH  153 (311)
T d1r0pa_         112 KHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVH  153 (311)
T ss_dssp             TTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred             ecCchhhhhccccccchHHHHHHHHHHHHHhhhhhcccCccc
Confidence            99999999986532               2466777777776


No 52 
>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.52  E-value=5.4e-15  Score=155.20  Aligned_cols=92  Identities=28%  Similarity=0.516  Sum_probs=76.9

Q ss_pred             hcCccccCeeeccCCeeEEEEEEcC-C-----CEEEEEEcCCc-ChhcHHHHHHHHHHHHhC-CCCCccceEEEEEECCE
Q 004275          658 TNNFDAANKIGEGGFGPVYKGTLSD-G-----AVIAVKQLSSK-SKQGNREFVNEIGMISAL-QHQNLVKLYGCCIEGNQ  729 (764)
Q Consensus       658 ~~~~~~~~~iG~G~~g~Vy~~~~~~-g-----~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~  729 (764)
                      .++|+..+.||+|+||+||+|+... +     ..||||.+... .......|.+|++++.++ +|||||+++|+|.+.+.
T Consensus        36 ~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~  115 (325)
T d1rjba_          36 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGP  115 (325)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             HHHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCCe
Confidence            3568888999999999999998532 2     26999998653 233456899999999998 89999999999999999


Q ss_pred             EEEEEcccCCCcHHHHHhcC
Q 004275          730 LLLVYEYLENNSLARALFGN  749 (764)
Q Consensus       730 ~~lv~Ey~~~GsL~~~L~~~  749 (764)
                      .++|||||++|+|.++|+.+
T Consensus       116 ~~lv~Ey~~~g~L~~~l~~~  135 (325)
T d1rjba_         116 IYLIFEYCCYGDLLNYLRSK  135 (325)
T ss_dssp             CEEEEECCTTCBHHHHHHTT
T ss_pred             EEEEEEcCCCCcHHHHHHhc
Confidence            99999999999999999764


No 53 
>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.51  E-value=4.7e-15  Score=151.14  Aligned_cols=90  Identities=29%  Similarity=0.529  Sum_probs=77.0

Q ss_pred             cCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcC--hhcHHHHHHHHHHHHhCCCCCccceEEEEEE--CCEEEEE
Q 004275          659 NNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKS--KQGNREFVNEIGMISALQHQNLVKLYGCCIE--GNQLLLV  733 (764)
Q Consensus       659 ~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~--~~~~~lv  733 (764)
                      ++|+..+.||+|+||+||+|+. .+|+.||||.+....  ....+.|.+|++++++++|||||++++++.+  .+..|+|
T Consensus         4 edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~iv   83 (269)
T d2java1           4 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIV   83 (269)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEEE
T ss_pred             hhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEEE
Confidence            5688999999999999999985 578999999997543  3345679999999999999999999999865  4568999


Q ss_pred             EcccCCCcHHHHHhc
Q 004275          734 YEYLENNSLARALFG  748 (764)
Q Consensus       734 ~Ey~~~GsL~~~L~~  748 (764)
                      ||||++|+|.+++..
T Consensus        84 mEy~~~g~L~~~i~~   98 (269)
T d2java1          84 MEYCEGGDLASVITK   98 (269)
T ss_dssp             EECCTTEEHHHHHHH
T ss_pred             EecCCCCcHHHHHHh
Confidence            999999999999863


No 54 
>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.51  E-value=4.6e-15  Score=155.13  Aligned_cols=106  Identities=20%  Similarity=0.311  Sum_probs=90.2

Q ss_pred             cCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcC---hhcHHHHHHHHHHHH-hCCCCCccceEEEEEECCEEEEE
Q 004275          659 NNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKS---KQGNREFVNEIGMIS-ALQHQNLVKLYGCCIEGNQLLLV  733 (764)
Q Consensus       659 ~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~-~l~H~niv~l~g~~~~~~~~~lv  733 (764)
                      ++|...+.||+|+||+||+|+. .+|+.||||++....   ....+.+.+|..++. .++|||||++++++.+.+..|+|
T Consensus         2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yiv   81 (320)
T d1xjda_           2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV   81 (320)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred             CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEE
Confidence            5688899999999999999995 578999999996432   234567788888776 58999999999999999999999


Q ss_pred             EcccCCCcHHHHHhcCCC--------------CCCCHHHHccccC
Q 004275          734 YEYLENNSLARALFGNAI--------------TKITYTFSLHLWN  764 (764)
Q Consensus       734 ~Ey~~~GsL~~~L~~~~~--------------~~l~~~~~~~i~h  764 (764)
                      ||||++|+|.++++....              .++.|.|+.+|+|
T Consensus        82 mEy~~~g~L~~~i~~~~~~~e~~~~~~~~qi~~al~ylH~~~iiH  126 (320)
T d1xjda_          82 MEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVY  126 (320)
T ss_dssp             EECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBC
T ss_pred             EeecCCCcHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCeee
Confidence            999999999999975432              3689999999998


No 55 
>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.51  E-value=1.1e-14  Score=151.67  Aligned_cols=91  Identities=33%  Similarity=0.585  Sum_probs=75.9

Q ss_pred             cCccccCeeeccCCeeEEEEEEc-CCC--EEEEEEcCCc-ChhcHHHHHHHHHHHHhC-CCCCccceEEEEEECCEEEEE
Q 004275          659 NNFDAANKIGEGGFGPVYKGTLS-DGA--VIAVKQLSSK-SKQGNREFVNEIGMISAL-QHQNLVKLYGCCIEGNQLLLV  733 (764)
Q Consensus       659 ~~~~~~~~iG~G~~g~Vy~~~~~-~g~--~vAvK~l~~~-~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv  733 (764)
                      ++|+..+.||+|+||.||+|+.. +|.  .||||++... .....++|.+|+++|+++ +|||||+++|+|.+.+..++|
T Consensus        10 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~iV   89 (309)
T d1fvra_          10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA   89 (309)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred             HHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeEEE
Confidence            45778899999999999999964 444  5788988543 333456899999999998 799999999999999999999


Q ss_pred             EcccCCCcHHHHHhcC
Q 004275          734 YEYLENNSLARALFGN  749 (764)
Q Consensus       734 ~Ey~~~GsL~~~L~~~  749 (764)
                      |||+++|+|.++|+..
T Consensus        90 ~ey~~~g~L~~~l~~~  105 (309)
T d1fvra_          90 IEYAPHGNLLDFLRKS  105 (309)
T ss_dssp             ECCCTTCBHHHHHHTT
T ss_pred             EEecCCCcHHHHHhhc
Confidence            9999999999999754


No 56 
>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=99.51  E-value=5.9e-15  Score=151.38  Aligned_cols=107  Identities=18%  Similarity=0.239  Sum_probs=89.9

Q ss_pred             hcCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcC---hhcHHHHHHHHHHHHhCCCCCccceEEEEEECC----E
Q 004275          658 TNNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKS---KQGNREFVNEIGMISALQHQNLVKLYGCCIEGN----Q  729 (764)
Q Consensus       658 ~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~----~  729 (764)
                      .+.|+..+.||+|+||.||+|+. .+|+.||||++....   ....+.|.+|++++++++|||||++++++...+    .
T Consensus         6 ~drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~   85 (277)
T d1o6ya_           6 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL   85 (277)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEE
T ss_pred             cceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCce
Confidence            35688999999999999999994 679999999997543   223467999999999999999999999998754    3


Q ss_pred             EEEEEcccCCCcHHHHHhcCCC--------------CCCCHHHHccccC
Q 004275          730 LLLVYEYLENNSLARALFGNAI--------------TKITYTFSLHLWN  764 (764)
Q Consensus       730 ~~lv~Ey~~~GsL~~~L~~~~~--------------~~l~~~~~~~i~h  764 (764)
                      .|+|||||++|+|.+++.....              .+++|.|+.+|+|
T Consensus        86 ~~lvmE~~~g~~L~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~iiH  134 (277)
T d1o6ya_          86 PYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIH  134 (277)
T ss_dssp             EEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred             EEEEEECCCCCEehhhhcccCCCCHHHHHHHHHHHHHHHHHHHhCCccC
Confidence            7899999999999999875421              3688999999988


No 57 
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.50  E-value=2e-15  Score=155.47  Aligned_cols=208  Identities=13%  Similarity=0.202  Sum_probs=121.6

Q ss_pred             CCCCCCEEEeeCCcCCCC-CCccCCCCCCCcEEEccCccCCCCCcccccCCCCCcEEEccCc-cCCCc-CcccccCCCCC
Q 004275          155 DISTLEELVLEDNQLVGP-LPENLGNLKSLRRILLSSNNFTGSIPESYGNLKNLTEFRIDGS-NLTGR-IPNFIGNWTKL  231 (764)
Q Consensus       155 ~l~~L~~L~Ls~N~l~~~-~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n-~l~~~-~p~~~~~l~~L  231 (764)
                      ...+|++|||+++.+... ++..+.++++|++|+|++|.+++..+..++.+++|++|+++++ .++.. +......+++|
T Consensus        44 ~~~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~l~~l~~~~~~L  123 (284)
T d2astb2          44 SPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRL  123 (284)
T ss_dssp             CCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTC
T ss_pred             cCCCCCEEECCCCccCHHHHHHHHHhCCCcccccccccCCCcHHHHHHhcCCCCcCccccccccccccccchhhHHHHhc
Confidence            445666666666655432 2233455666666666666666555556666666666666663 34321 11223455667


Q ss_pred             CEEeeeCCc-CCCC-Cccchhc-CCCCCEEEcCCCC--CCCCCCCC-ccCCccccccccccc-cccccCCccccCCCCCC
Q 004275          232 DRLDLQGTS-LEGP-IPSTISQ-LKNLTELRISDLK--GSSSSFPN-LQDMKKMERLILRNC-LITGRIPEYIEDMTDLK  304 (764)
Q Consensus       232 ~~L~L~~N~-l~~~-~p~~l~~-l~~L~~L~L~~n~--~~~~~~~~-l~~l~~L~~L~Ls~N-~l~~~~p~~~~~l~~L~  304 (764)
                      ++|+++++. ++.. +...+.. .++|+.|+++++.  .....+.. ...+++|++|++++| .+++.....+..+++|+
T Consensus       124 ~~L~ls~c~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~i~~~~l~~l~~~~~~L~~L~L~~~~~itd~~~~~l~~~~~L~  203 (284)
T d2astb2         124 DELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQ  203 (284)
T ss_dssp             CEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCC
T ss_pred             cccccccccccccccchhhhcccccccchhhhcccccccccccccccccccccccccccccccCCCchhhhhhcccCcCC
Confidence            777776642 3211 1122222 3567777776531  11111111 245677777777775 46666666777888899


Q ss_pred             EEeccCC-CCCCCccccccCCCCCCEEeccCCcCcCCCChhhhcCCCeEEeecCcCCCCC
Q 004275          305 ILDLSFN-QLTGPVPGILQNLKKIDYIFLTNNSLSGTLPDWILTSEKNLDLSYNNFTESS  363 (764)
Q Consensus       305 ~L~Ls~N-~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~l~~L~Ls~N~l~~~~  363 (764)
                      +|+++++ .+++.....++++++|+.|+++++ ++...-..+......|++..++++...
T Consensus       204 ~L~L~~C~~i~~~~l~~L~~~~~L~~L~l~~~-~~d~~l~~l~~~lp~L~i~~~~ls~~~  262 (284)
T d2astb2         204 HLSLSRCYDIIPETLLELGEIPTLKTLQVFGI-VPDGTLQLLKEALPHLQINCSHFTTIA  262 (284)
T ss_dssp             EEECTTCTTCCGGGGGGGGGCTTCCEEECTTS-SCTTCHHHHHHHSTTSEESCCCSCCTT
T ss_pred             EEECCCCCCCChHHHHHHhcCCCCCEEeeeCC-CCHHHHHHHHHhCccccccCccCCCCC
Confidence            9999884 677666667788899999998877 332222223344556777788887763


No 58 
>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.49  E-value=1e-14  Score=149.25  Aligned_cols=106  Identities=23%  Similarity=0.330  Sum_probs=86.9

Q ss_pred             hcCccccCeeeccCCeeEEEEEEcC----CCEEEEEEcCCcC-hhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEE
Q 004275          658 TNNFDAANKIGEGGFGPVYKGTLSD----GAVIAVKQLSSKS-KQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLL  732 (764)
Q Consensus       658 ~~~~~~~~~iG~G~~g~Vy~~~~~~----g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  732 (764)
                      .++|+..+.||+|+||.||+|+...    +..||||.+.... ....+.|.+|++++++++|||||+++|+|. .+..++
T Consensus         6 ~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~i   84 (273)
T d1mp8a_           6 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI   84 (273)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEE
T ss_pred             HHHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCeEEE
Confidence            4568888999999999999998632    3579999997543 334567999999999999999999999995 567899


Q ss_pred             EEcccCCCcHHHHHhcCCC---------------CCCCHHHHccccC
Q 004275          733 VYEYLENNSLARALFGNAI---------------TKITYTFSLHLWN  764 (764)
Q Consensus       733 v~Ey~~~GsL~~~L~~~~~---------------~~l~~~~~~~i~h  764 (764)
                      |||||++|+|.+++.....               .++.|.|..+|+|
T Consensus        85 v~E~~~~g~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiH  131 (273)
T d1mp8a_          85 IMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVH  131 (273)
T ss_dssp             EEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred             EEEeccCCcHHhhhhccCCCCCHHHHHHHHHHHHHHhhhhcccCeec
Confidence            9999999999998875432               2477778888887


No 59 
>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.48  E-value=3.2e-15  Score=155.76  Aligned_cols=92  Identities=25%  Similarity=0.490  Sum_probs=79.6

Q ss_pred             hhcCccccCeeeccCCeeEEEEEEc------CCCEEEEEEcCCc-ChhcHHHHHHHHHHHHhCCCCCccceEEEEEECCE
Q 004275          657 ATNNFDAANKIGEGGFGPVYKGTLS------DGAVIAVKQLSSK-SKQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQ  729 (764)
Q Consensus       657 ~~~~~~~~~~iG~G~~g~Vy~~~~~------~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~  729 (764)
                      ..++|...+.||+|+||+||+|.+.      +++.||||+++.. .......|.+|++++++++|||||+++|+|...+.
T Consensus        18 ~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~   97 (308)
T d1p4oa_          18 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP   97 (308)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSS
T ss_pred             cHHHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEEecCCc
Confidence            3466888899999999999999853      3578999999753 33445679999999999999999999999999999


Q ss_pred             EEEEEcccCCCcHHHHHhc
Q 004275          730 LLLVYEYLENNSLARALFG  748 (764)
Q Consensus       730 ~~lv~Ey~~~GsL~~~L~~  748 (764)
                      .++|||||++|+|.++++.
T Consensus        98 ~~lv~e~~~~g~l~~~~~~  116 (308)
T d1p4oa_          98 TLVIMELMTRGDLKSYLRS  116 (308)
T ss_dssp             CEEEEECCTTCBHHHHHHH
T ss_pred             eeEEEeecCCCCHHHHHHh
Confidence            9999999999999999864


No 60 
>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.48  E-value=6.4e-15  Score=153.67  Aligned_cols=92  Identities=28%  Similarity=0.469  Sum_probs=79.9

Q ss_pred             hcCccccCeeeccCCeeEEEEEE------cCCCEEEEEEcCCcC-hhcHHHHHHHHHHHHhC-CCCCccceEEEEEECCE
Q 004275          658 TNNFDAANKIGEGGFGPVYKGTL------SDGAVIAVKQLSSKS-KQGNREFVNEIGMISAL-QHQNLVKLYGCCIEGNQ  729 (764)
Q Consensus       658 ~~~~~~~~~iG~G~~g~Vy~~~~------~~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~  729 (764)
                      .++|+..+.||+|+||.||+|++      .+++.||||+++... .....+|.+|+++++++ +|||||+++|+|.+.+.
T Consensus        22 ~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~~~  101 (311)
T d1t46a_          22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP  101 (311)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             HHHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeCCE
Confidence            45688889999999999999985      245689999997643 34456899999999998 69999999999999999


Q ss_pred             EEEEEcccCCCcHHHHHhcC
Q 004275          730 LLLVYEYLENNSLARALFGN  749 (764)
Q Consensus       730 ~~lv~Ey~~~GsL~~~L~~~  749 (764)
                      .++|||||++|+|.++++..
T Consensus       102 ~~lvmE~~~~g~l~~~l~~~  121 (311)
T d1t46a_         102 TLVITEYCCYGDLLNFLRRK  121 (311)
T ss_dssp             CEEEEECCTTEEHHHHHHHT
T ss_pred             EEEEEEcCCCCCHHHHHHhc
Confidence            99999999999999999754


No 61 
>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.46  E-value=3.6e-14  Score=148.34  Aligned_cols=105  Identities=23%  Similarity=0.468  Sum_probs=84.2

Q ss_pred             cCccccCeeeccCCeeEEEEEE-cCCC----EEEEEEcCCc-ChhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEE
Q 004275          659 NNFDAANKIGEGGFGPVYKGTL-SDGA----VIAVKQLSSK-SKQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLL  732 (764)
Q Consensus       659 ~~~~~~~~iG~G~~g~Vy~~~~-~~g~----~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  732 (764)
                      ++|+..++||+|+||+||+|+. .+|+    .||||++... .....++|.+|++++++++|||||+++|+|.+ +..++
T Consensus         9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~-~~~~~   87 (317)
T d1xkka_           9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT-STVQL   87 (317)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEE
T ss_pred             HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCeeE
Confidence            3588999999999999999985 3444    6899998653 33456789999999999999999999999976 55778


Q ss_pred             EEcccCCCcHHHHHhcCCC---------------CCCCHHHHccccC
Q 004275          733 VYEYLENNSLARALFGNAI---------------TKITYTFSLHLWN  764 (764)
Q Consensus       733 v~Ey~~~GsL~~~L~~~~~---------------~~l~~~~~~~i~h  764 (764)
                      ++||+++|+|.+++.....               .++.|.|..+|+|
T Consensus        88 v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~iiH  134 (317)
T d1xkka_          88 ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH  134 (317)
T ss_dssp             EEECCTTCBHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred             EEEeccCCcccccccccccCCCHHHHHHHHHHHHHHHHHHHHcCccc
Confidence            8999999999998876431               3578888888888


No 62 
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.46  E-value=1.2e-15  Score=167.41  Aligned_cols=276  Identities=18%  Similarity=0.198  Sum_probs=161.8

Q ss_pred             eEEEEEcCCCcccccC-CccCCCCCCCCEEEccCCcCCc----cCchhhhcCCCCcEEecccCcCccc----CCcCcC-C
Q 004275           86 HVTVILLKGFNLAGVI-PEEFGNLTFLQEVDLSRNYFNG----SLPKSFARLQNLTKLLILGNRLSGS----IPLEIG-D  155 (764)
Q Consensus        86 ~v~~L~L~~~~l~g~~-p~~l~~L~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~n~l~~~----~p~~~~-~  155 (764)
                      .++.||++++++++.. ..-+..+++|++|+|++|.++.    .++..+..+++|++|+|++|.++..    +...+. .
T Consensus         3 ~l~~ld~~~~~i~~~~~~~l~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~~~l~~~l~~~   82 (460)
T d1z7xw1           3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTP   82 (460)
T ss_dssp             EEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCST
T ss_pred             CCCEEEeeCCcCChHHHHHHHHhCCCCCEEEeCCCCCCHHHHHHHHHHHhcCCCCCEEECcCCcCChHHHHHHHHHHhcC
Confidence            4677777777765421 2234456677777777777652    2344556677777777777766421    222222 2


Q ss_pred             CCCCCEEEeeCCcCCCC----CCccCCCCCCCcEEEccCccCCCCCc---------------------------------
Q 004275          156 ISTLEELVLEDNQLVGP----LPENLGNLKSLRRILLSSNNFTGSIP---------------------------------  198 (764)
Q Consensus       156 l~~L~~L~Ls~N~l~~~----~p~~l~~l~~L~~L~Ls~N~l~~~~p---------------------------------  198 (764)
                      ..+|++|+|++|+++..    ++..+..+++|++|+|++|.++....                                 
T Consensus        83 ~~~L~~L~L~~n~it~~~~~~l~~~l~~~~~L~~L~L~~N~i~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (460)
T d1z7xw1          83 SCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLA  162 (460)
T ss_dssp             TCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHH
T ss_pred             CCCCCEEECCCCCccccccccccchhhccccccccccccccchhhhhhhhhhcccccccccccccccccccchhhhcccc
Confidence            24677777777776532    33456666777777777766431000                                 


Q ss_pred             ---------------------------------------------------------ccccCCCCCcEEEccCccCCC--
Q 004275          199 ---------------------------------------------------------ESYGNLKNLTEFRIDGSNLTG--  219 (764)
Q Consensus       199 ---------------------------------------------------------~~~~~l~~L~~L~L~~n~l~~--  219 (764)
                                                                               ..+...+.++.+++..|.+..  
T Consensus       163 ~~l~~~~~~~~~~ls~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~n~~~~~~  242 (460)
T d1z7xw1         163 SVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVG  242 (460)
T ss_dssp             HHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHH
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccchhhhcccccccccccccccchhhccccccc
Confidence                                                                     000011223333333332211  


Q ss_pred             ---cCcccccCCCCCCEEeeeCCcCCCC----CccchhcCCCCCEEEcCCCCCCCCCCCC-----ccCCccccccccccc
Q 004275          220 ---RIPNFIGNWTKLDRLDLQGTSLEGP----IPSTISQLKNLTELRISDLKGSSSSFPN-----LQDMKKMERLILRNC  287 (764)
Q Consensus       220 ---~~p~~~~~l~~L~~L~L~~N~l~~~----~p~~l~~l~~L~~L~L~~n~~~~~~~~~-----l~~l~~L~~L~Ls~N  287 (764)
                         ..+........++.+++++|.+...    ....+...+.++.+++++|.+....+..     ......|+.+++++|
T Consensus       243 ~~~~~~~~~~~~~~l~~l~l~~n~i~~~~~~~~~~~l~~~~~l~~l~l~~n~i~~~~~~~l~~~l~~~~~~L~~l~l~~~  322 (460)
T d1z7xw1         243 MAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSC  322 (460)
T ss_dssp             HHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTS
T ss_pred             cchhhcccccccccccccccccccccccccccccccccccccccccccccccccccccchhhcccccccccccccccccc
Confidence               1112233456799999999988643    2234567888999999886543211111     123457888889888


Q ss_pred             cccccCCc----cccCCCCCCEEeccCCCCCCC----cccccc-CCCCCCEEeccCCcCcCC----CChhh--hcCCCeE
Q 004275          288 LITGRIPE----YIEDMTDLKILDLSFNQLTGP----VPGILQ-NLKKIDYIFLTNNSLSGT----LPDWI--LTSEKNL  352 (764)
Q Consensus       288 ~l~~~~p~----~~~~l~~L~~L~Ls~N~l~g~----~p~~~~-~l~~L~~L~L~~N~l~g~----~p~~~--~~~l~~L  352 (764)
                      .++.....    .+...++|++|+|++|++++.    ++..+. ..+.|++|+|++|.|+..    +++.+  .+.+++|
T Consensus       323 ~l~~~~~~~l~~~~~~~~~L~~L~Ls~N~i~~~g~~~l~~~l~~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~L  402 (460)
T d1z7xw1         323 SFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLREL  402 (460)
T ss_dssp             CCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEE
T ss_pred             chhhhhhhhcccccccccchhhhheeeecccCcccchhhhhhhcccCCCCEEECCCCCCChHHHHHHHHHHhcCCCCCEE
Confidence            88754322    234557899999999988643    233332 456789999999988742    33333  3567899


Q ss_pred             EeecCcCCC
Q 004275          353 DLSYNNFTE  361 (764)
Q Consensus       353 ~Ls~N~l~~  361 (764)
                      ||++|+|+.
T Consensus       403 ~Ls~N~i~~  411 (460)
T d1z7xw1         403 DLSNNCLGD  411 (460)
T ss_dssp             ECCSSSCCH
T ss_pred             ECCCCcCCH
Confidence            999998875


No 63 
>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.46  E-value=4.1e-14  Score=146.56  Aligned_cols=105  Identities=30%  Similarity=0.543  Sum_probs=85.4

Q ss_pred             cCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcC--hhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEEc
Q 004275          659 NNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKS--KQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVYE  735 (764)
Q Consensus       659 ~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  735 (764)
                      ++|+..+.||+|+||+||+|+. .+|+.||||++....  ....+.+.+|++++++++|||||++++++.+.+..|+|||
T Consensus         2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~e   81 (298)
T d1gz8a_           2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE   81 (298)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEEEe
Confidence            5788999999999999999994 679999999996533  2235689999999999999999999999999999999999


Q ss_pred             ccCCCcHHHHHhcCCC----------------CCCCHHHHccccC
Q 004275          736 YLENNSLARALFGNAI----------------TKITYTFSLHLWN  764 (764)
Q Consensus       736 y~~~GsL~~~L~~~~~----------------~~l~~~~~~~i~h  764 (764)
                      |+.++ +.+++.....                .+|.|.|+.+|+|
T Consensus        82 ~~~~~-~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~~IiH  125 (298)
T d1gz8a_          82 FLHQD-LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH  125 (298)
T ss_dssp             CCSEE-HHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred             ecCCc-hhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcCCEEc
Confidence            99865 4455533211                3588889999988


No 64 
>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.46  E-value=1.4e-14  Score=148.09  Aligned_cols=105  Identities=27%  Similarity=0.478  Sum_probs=78.5

Q ss_pred             cCccccCeeeccCCeeEEEEEEc--CC--CEEEEEEcCCc---ChhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEE
Q 004275          659 NNFDAANKIGEGGFGPVYKGTLS--DG--AVIAVKQLSSK---SKQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLL  731 (764)
Q Consensus       659 ~~~~~~~~iG~G~~g~Vy~~~~~--~g--~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~  731 (764)
                      ++|+..+.||+|+||.||+|+..  ++  ..||||++...   .....++|.+|++++++++|||||+++|+|.+ +..+
T Consensus         8 ~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~-~~~~   86 (273)
T d1u46a_           8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT-PPMK   86 (273)
T ss_dssp             GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCE
T ss_pred             HHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-cchh
Confidence            45888899999999999999853  23  36899999653   22335689999999999999999999999965 5678


Q ss_pred             EEEcccCCCcHHHHHhcCC---------------CCCCCHHHHccccC
Q 004275          732 LVYEYLENNSLARALFGNA---------------ITKITYTFSLHLWN  764 (764)
Q Consensus       732 lv~Ey~~~GsL~~~L~~~~---------------~~~l~~~~~~~i~h  764 (764)
                      +|||||++|++.+++..+.               ..++.|.|..+|+|
T Consensus        87 lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiH  134 (273)
T d1u46a_          87 MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIH  134 (273)
T ss_dssp             EEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred             eeeeeecCcchhhhhhcccCCCCHHHHHHHHHHHHHHHHHhhhCCEee
Confidence            9999999999999886432               13578888888887


No 65 
>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.45  E-value=2.3e-14  Score=152.43  Aligned_cols=106  Identities=23%  Similarity=0.327  Sum_probs=87.1

Q ss_pred             cCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcC---hhcHHHHHH---HHHHHHhCCCCCccceEEEEEECCEEE
Q 004275          659 NNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKS---KQGNREFVN---EIGMISALQHQNLVKLYGCCIEGNQLL  731 (764)
Q Consensus       659 ~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~f~~---E~~~l~~l~H~niv~l~g~~~~~~~~~  731 (764)
                      ++|+..+.||+|+||.||+|+. .+|+.||||++....   ......+.+   |+++++.++|||||++++++.+.+..|
T Consensus         4 ddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~~   83 (364)
T d1omwa3           4 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS   83 (364)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred             HhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCEEE
Confidence            5788999999999999999995 579999999986422   112233444   467777888999999999999999999


Q ss_pred             EEEcccCCCcHHHHHhcCCC--------------CCCCHHHHccccC
Q 004275          732 LVYEYLENNSLARALFGNAI--------------TKITYTFSLHLWN  764 (764)
Q Consensus       732 lv~Ey~~~GsL~~~L~~~~~--------------~~l~~~~~~~i~h  764 (764)
                      +|||||++|+|.++|.....              .+|.|.|..+|+|
T Consensus        84 ivmE~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~ylH~~~iiH  130 (364)
T d1omwa3          84 FILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVY  130 (364)
T ss_dssp             EEECCCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred             EEEEecCCCcHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHCCccc
Confidence            99999999999999975421              3689999999998


No 66 
>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}
Probab=99.45  E-value=3.9e-14  Score=145.81  Aligned_cols=106  Identities=26%  Similarity=0.432  Sum_probs=91.4

Q ss_pred             cCccccCeeeccCCeeEEEEEEcCCCEEEEEEcCCcCh--hcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEEcc
Q 004275          659 NNFDAANKIGEGGFGPVYKGTLSDGAVIAVKQLSSKSK--QGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVYEY  736 (764)
Q Consensus       659 ~~~~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey  736 (764)
                      ++|+..+.||+|+||+||+|+.++|+.||||++.....  ...+.|.+|+.+|++++|||||++++++...+..+++|||
T Consensus         2 ~~Y~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e~   81 (286)
T d1ob3a_           2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH   81 (286)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             CCceeccEEecCCCcEEEEEEeCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEEEe
Confidence            46888999999999999999988999999999965432  2357899999999999999999999999999999999999


Q ss_pred             cCCCcHHHHHhcCCC--------------CCCCHHHHccccC
Q 004275          737 LENNSLARALFGNAI--------------TKITYTFSLHLWN  764 (764)
Q Consensus       737 ~~~GsL~~~L~~~~~--------------~~l~~~~~~~i~h  764 (764)
                      +.++.+..+......              .+|.|.|..+|+|
T Consensus        82 ~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~IvH  123 (286)
T d1ob3a_          82 LDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLH  123 (286)
T ss_dssp             CSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred             ehhhhHHHHHhhcCCcchhhhHHHHHHHHHHHHHhccCcEEe
Confidence            998877766654431              3689999999998


No 67 
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.45  E-value=1.7e-13  Score=121.82  Aligned_cols=102  Identities=25%  Similarity=0.357  Sum_probs=59.6

Q ss_pred             CEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEeeCCcCCCCCCccCCCCCCCcEEEccCc
Q 004275          112 QEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVLEDNQLVGPLPENLGNLKSLRRILLSSN  191 (764)
Q Consensus       112 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N  191 (764)
                      |+|||++|+++ .++ .+.++++|++|++++|+++ .+|..++.+++|++|++++|+++. +| .+.++++|++|++++|
T Consensus         1 R~L~Ls~n~l~-~l~-~l~~l~~L~~L~ls~N~l~-~lp~~~~~l~~L~~L~l~~N~i~~-l~-~~~~l~~L~~L~l~~N   75 (124)
T d1dcea3           1 RVLHLAHKDLT-VLC-HLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNN   75 (124)
T ss_dssp             SEEECTTSCCS-SCC-CGGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSS
T ss_pred             CEEEcCCCCCC-CCc-ccccCCCCCEEECCCCccC-cchhhhhhhhcccccccccccccc-cC-ccccccccCeEECCCC
Confidence            45666666665 333 3666666666666666665 455566666666666666666653 33 3566666666666666


Q ss_pred             cCCCCC-cccccCCCCCcEEEccCccCC
Q 004275          192 NFTGSI-PESYGNLKNLTEFRIDGSNLT  218 (764)
Q Consensus       192 ~l~~~~-p~~~~~l~~L~~L~L~~n~l~  218 (764)
                      +++... ...+..+++|+.|++++|.++
T Consensus        76 ~i~~~~~~~~l~~~~~L~~L~l~~N~i~  103 (124)
T d1dcea3          76 RLQQSAAIQPLVSCPRLVLLNLQGNSLC  103 (124)
T ss_dssp             CCCSSSTTGGGGGCTTCCEEECTTSGGG
T ss_pred             ccCCCCCchhhcCCCCCCEEECCCCcCC
Confidence            665322 134555555555555555554


No 68 
>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.44  E-value=2.8e-14  Score=151.00  Aligned_cols=106  Identities=25%  Similarity=0.326  Sum_probs=92.1

Q ss_pred             cCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcC---hhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEE
Q 004275          659 NNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKS---KQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVY  734 (764)
Q Consensus       659 ~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  734 (764)
                      ++|+..+.||+|+||.||+|+. .+|+.||||++....   ....+.+.+|+++|++++|||||++++++...+..++||
T Consensus        41 d~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~v~  120 (350)
T d1rdqe_          41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM  120 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeeccccccccccccccc
Confidence            4688999999999999999995 579999999986432   223567999999999999999999999999999999999


Q ss_pred             cccCCCcHHHHHhcCCC--------------CCCCHHHHccccC
Q 004275          735 EYLENNSLARALFGNAI--------------TKITYTFSLHLWN  764 (764)
Q Consensus       735 Ey~~~GsL~~~L~~~~~--------------~~l~~~~~~~i~h  764 (764)
                      ||+++|+|.+++.....              .+|.|.|+.+|+|
T Consensus       121 e~~~~g~l~~~l~~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiH  164 (350)
T d1rdqe_         121 EYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIY  164 (350)
T ss_dssp             ECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred             ccccccchhhhHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCEec
Confidence            99999999999975421              4689999999998


No 69 
>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.44  E-value=3e-14  Score=147.68  Aligned_cols=101  Identities=21%  Similarity=0.387  Sum_probs=81.5

Q ss_pred             cCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcChh-----cHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEEccc
Q 004275          664 ANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKSKQ-----GNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVYEYL  737 (764)
Q Consensus       664 ~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~-----~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey~  737 (764)
                      .++||+|+||+||+|+. .+|+.||||++......     ..+.+.+|++++++++|||||++++++...+..++|||||
T Consensus         3 l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~~   82 (299)
T d1ua2a_           3 LDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFM   82 (299)
T ss_dssp             EEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEECC
T ss_pred             ceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhhh
Confidence            46899999999999994 57999999999654321     1246899999999999999999999999999999999999


Q ss_pred             CCCcHHHHHhcCCC--------------CCCCHHHHccccC
Q 004275          738 ENNSLARALFGNAI--------------TKITYTFSLHLWN  764 (764)
Q Consensus       738 ~~GsL~~~L~~~~~--------------~~l~~~~~~~i~h  764 (764)
                      ++|++..+......              .+|.|.|..+|+|
T Consensus        83 ~~~~~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~iiH  123 (299)
T d1ua2a_          83 ETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILH  123 (299)
T ss_dssp             SEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred             cchHHhhhhhcccCCCHHHHHHHHHHHHHHHHHhhccceec
Confidence            99877666543321              3688999999998


No 70 
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.43  E-value=6.5e-14  Score=130.95  Aligned_cols=111  Identities=18%  Similarity=0.184  Sum_probs=61.6

Q ss_pred             CCCCCCCCEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEeeCCcCCCCCCccCCCCCCCc
Q 004275          105 FGNLTFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVLEDNQLVGPLPENLGNLKSLR  184 (764)
Q Consensus       105 l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~  184 (764)
                      +.+...|++|||++|+|+. +|..+..+++|++|+|++|.++ .++ .|..+++|++|++++|+++...+..+..+++|+
T Consensus        14 ~~n~~~lr~L~L~~n~I~~-i~~~~~~l~~L~~L~Ls~N~i~-~l~-~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~L~   90 (162)
T d1a9na_          14 YTNAVRDRELDLRGYKIPV-IENLGATLDQFDAIDFSDNEIR-KLD-GFPLLRRLKTLLVNNNRICRIGEGLDQALPDLT   90 (162)
T ss_dssp             EECTTSCEEEECTTSCCCS-CCCGGGGTTCCSEEECCSSCCC-EEC-CCCCCSSCCEEECCSSCCCEECSCHHHHCTTCC
T ss_pred             ccCcCcCcEEECCCCCCCc-cCccccccccCCEEECCCCCCC-ccC-CcccCcchhhhhcccccccCCCccccccccccc
Confidence            4455566777777777663 4555566666666776666666 332 356666666666666666543333344566666


Q ss_pred             EEEccCccCCCCCc-ccccCCCCCcEEEccCccCC
Q 004275          185 RILLSSNNFTGSIP-ESYGNLKNLTEFRIDGSNLT  218 (764)
Q Consensus       185 ~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~n~l~  218 (764)
                      +|++++|+++.... ..+..+++|++|++++|.++
T Consensus        91 ~L~L~~N~i~~~~~l~~l~~l~~L~~L~l~~N~i~  125 (162)
T d1a9na_          91 ELILTNNSLVELGDLDPLASLKSLTYLCILRNPVT  125 (162)
T ss_dssp             EEECCSCCCCCGGGGGGGGGCTTCCEEECCSSGGG
T ss_pred             cceeccccccccccccccccccccchhhcCCCccc
Confidence            66666666542111 23444444444444444443


No 71 
>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.43  E-value=1e-13  Score=145.71  Aligned_cols=102  Identities=19%  Similarity=0.223  Sum_probs=83.5

Q ss_pred             hcCcccc-CeeeccCCeeEEEEEE-cCCCEEEEEEcCCcChhcHHHHHHHHHHHHhC-CCCCccceEEEEEE----CCEE
Q 004275          658 TNNFDAA-NKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKSKQGNREFVNEIGMISAL-QHQNLVKLYGCCIE----GNQL  730 (764)
Q Consensus       658 ~~~~~~~-~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~----~~~~  730 (764)
                      .++|... ++||+|+||+||+|+. .+++.||||+++..     +.+.+|++++.++ +|||||++++++.+    ....
T Consensus        10 ~~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~-----~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~   84 (335)
T d2ozaa1          10 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL   84 (335)
T ss_dssp             GGTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred             ccCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECCc-----HHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEE
Confidence            3567765 4699999999999984 67899999998542     4578899987665 89999999999875    3568


Q ss_pred             EEEEcccCCCcHHHHHhcCCC----------------CCCCHHHHccccC
Q 004275          731 LLVYEYLENNSLARALFGNAI----------------TKITYTFSLHLWN  764 (764)
Q Consensus       731 ~lv~Ey~~~GsL~~~L~~~~~----------------~~l~~~~~~~i~h  764 (764)
                      |+|||||++|+|.++|..+..                .++.|.|..+|+|
T Consensus        85 ~ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~iiH  134 (335)
T d2ozaa1          85 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH  134 (335)
T ss_dssp             EEEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred             EEEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHcCCcc
Confidence            999999999999999986432                2578888888888


No 72 
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.42  E-value=9.7e-14  Score=129.74  Aligned_cols=130  Identities=15%  Similarity=0.173  Sum_probs=104.5

Q ss_pred             hhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEeeCCcCCCCCCccCCCCCCCcEEEccCccCCCCCcccccCCCCC
Q 004275          128 SFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVLEDNQLVGPLPENLGNLKSLRRILLSSNNFTGSIPESYGNLKNL  207 (764)
Q Consensus       128 ~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L  207 (764)
                      .|.++.+|++|+|++|+++ .+|..+..+++|+.|+|++|+++. ++ .+..+++|++|++++|+++...+..+..+++|
T Consensus        13 ~~~n~~~lr~L~L~~n~I~-~i~~~~~~l~~L~~L~Ls~N~i~~-l~-~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~L   89 (162)
T d1a9na_          13 QYTNAVRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIRK-LD-GFPLLRRLKTLLVNNNRICRIGEGLDQALPDL   89 (162)
T ss_dssp             EEECTTSCEEEECTTSCCC-SCCCGGGGTTCCSEEECCSSCCCE-EC-CCCCCSSCCEEECCSSCCCEECSCHHHHCTTC
T ss_pred             hccCcCcCcEEECCCCCCC-ccCccccccccCCEEECCCCCCCc-cC-CcccCcchhhhhcccccccCCCcccccccccc
Confidence            3667788999999999998 567667789999999999999984 43 58889999999999999986656667789999


Q ss_pred             cEEEccCccCCCcCc-ccccCCCCCCEEeeeCCcCCCCC---ccchhcCCCCCEEEc
Q 004275          208 TEFRIDGSNLTGRIP-NFIGNWTKLDRLDLQGTSLEGPI---PSTISQLKNLTELRI  260 (764)
Q Consensus       208 ~~L~L~~n~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~---p~~l~~l~~L~~L~L  260 (764)
                      +.|++++|+++.... ..+..+++|++|++++|.++...   +..+..+++|+.||-
T Consensus        90 ~~L~L~~N~i~~~~~l~~l~~l~~L~~L~l~~N~i~~~~~~r~~~i~~lp~L~~LD~  146 (162)
T d1a9na_          90 TELILTNNSLVELGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLDF  146 (162)
T ss_dssp             CEEECCSCCCCCGGGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEETT
T ss_pred             ccceeccccccccccccccccccccchhhcCCCccccccchHHHHHHHCCCcCeeCC
Confidence            999999999874322 46788899999999999887432   235777888888763


No 73 
>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.42  E-value=1.1e-13  Score=143.36  Aligned_cols=95  Identities=31%  Similarity=0.443  Sum_probs=74.4

Q ss_pred             cCccccCeeeccCCeeEEEEEEcCCCEEEEEEcCCcChhcHHHHHHHHH--HHHhCCCCCccceEEEEEECC----EEEE
Q 004275          659 NNFDAANKIGEGGFGPVYKGTLSDGAVIAVKQLSSKSKQGNREFVNEIG--MISALQHQNLVKLYGCCIEGN----QLLL  732 (764)
Q Consensus       659 ~~~~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~--~l~~l~H~niv~l~g~~~~~~----~~~l  732 (764)
                      +.+...+.||+|+||.||+|++ +|+.||||+++...   .+++.+|.+  .+.+++|||||+++|+|.+.+    ..++
T Consensus         3 ~~~~l~~~iG~G~fg~Vy~~~~-~g~~vAvK~~~~~~---~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~l   78 (303)
T d1vjya_           3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL   78 (303)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEE-TTEEEEEEEECGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccc---hhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEE
Confidence            3466778999999999999997 68899999996532   334444544  556789999999999998754    5799


Q ss_pred             EEcccCCCcHHHHHhcCCCCCCCHHHHc
Q 004275          733 VYEYLENNSLARALFGNAITKITYTFSL  760 (764)
Q Consensus       733 v~Ey~~~GsL~~~L~~~~~~~l~~~~~~  760 (764)
                      |||||++|+|.++|+...   ++|..+.
T Consensus        79 v~Ey~~~g~L~~~l~~~~---l~~~~~~  103 (303)
T d1vjya_          79 VSDYHEHGSLFDYLNRYT---VTVEGMI  103 (303)
T ss_dssp             EEECCTTCBHHHHHHHCC---BCHHHHH
T ss_pred             EEecccCCCHHHHHhcCC---CCHHHHH
Confidence            999999999999998653   4454443


No 74 
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.42  E-value=4e-13  Score=119.43  Aligned_cols=118  Identities=22%  Similarity=0.279  Sum_probs=91.4

Q ss_pred             cEEecccCcCcccCCcCcCCCCCCCEEEeeCCcCCCCCCccCCCCCCCcEEEccCccCCCCCcccccCCCCCcEEEccCc
Q 004275          136 TKLLILGNRLSGSIPLEIGDISTLEELVLEDNQLVGPLPENLGNLKSLRRILLSSNNFTGSIPESYGNLKNLTEFRIDGS  215 (764)
Q Consensus       136 ~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n  215 (764)
                      |.|+|++|+++ .++ .++.+++|++|++++|+++ .+|..++.+++|++|++++|+++. +| .+..+++|++|++++|
T Consensus         1 R~L~Ls~n~l~-~l~-~l~~l~~L~~L~ls~N~l~-~lp~~~~~l~~L~~L~l~~N~i~~-l~-~~~~l~~L~~L~l~~N   75 (124)
T d1dcea3           1 RVLHLAHKDLT-VLC-HLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNN   75 (124)
T ss_dssp             SEEECTTSCCS-SCC-CGGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSS
T ss_pred             CEEEcCCCCCC-CCc-ccccCCCCCEEECCCCccC-cchhhhhhhhcccccccccccccc-cC-ccccccccCeEECCCC
Confidence            57899999998 444 4888899999999999987 567788889999999999999884 44 4888899999999999


Q ss_pred             cCCCcC-cccccCCCCCCEEeeeCCcCCCC---CccchhcCCCCCEE
Q 004275          216 NLTGRI-PNFIGNWTKLDRLDLQGTSLEGP---IPSTISQLKNLTEL  258 (764)
Q Consensus       216 ~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~---~p~~l~~l~~L~~L  258 (764)
                      +++... ...+..+++|+.|++++|.++..   .......+|+|+.|
T Consensus        76 ~i~~~~~~~~l~~~~~L~~L~l~~N~i~~~~~~~~~l~~~lp~L~~L  122 (124)
T d1dcea3          76 RLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSI  122 (124)
T ss_dssp             CCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSEE
T ss_pred             ccCCCCCchhhcCCCCCCEEECCCCcCCcCccHHHHHHHHCcCcceE
Confidence            887543 25678888889999988888632   22334456776665


No 75 
>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.40  E-value=1.5e-13  Score=142.34  Aligned_cols=92  Identities=25%  Similarity=0.495  Sum_probs=73.5

Q ss_pred             hcCccccCeeeccCCeeEEEEEEc--------CCCEEEEEEcCCcC-hhcHHHHHHHHHHHHhC-CCCCccceEEEEEEC
Q 004275          658 TNNFDAANKIGEGGFGPVYKGTLS--------DGAVIAVKQLSSKS-KQGNREFVNEIGMISAL-QHQNLVKLYGCCIEG  727 (764)
Q Consensus       658 ~~~~~~~~~iG~G~~g~Vy~~~~~--------~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~  727 (764)
                      .++|...+.||+|+||.||+|+..        ++..||||++.... .....++.+|+..+.++ +|||||+++|+|.+.
T Consensus        12 ~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~~   91 (299)
T d1fgka_          12 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD   91 (299)
T ss_dssp             GGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             HHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEecccccccC
Confidence            356778899999999999999842        23479999997643 33457899999999888 899999999999999


Q ss_pred             CEEEEEEcccCCCcHHHHHhcC
Q 004275          728 NQLLLVYEYLENNSLARALFGN  749 (764)
Q Consensus       728 ~~~~lv~Ey~~~GsL~~~L~~~  749 (764)
                      +..++|||||++|+|.++|+.+
T Consensus        92 ~~~~~v~e~~~~g~l~~~i~~~  113 (299)
T d1fgka_          92 GPLYVIVEYASKGNLREYLQAR  113 (299)
T ss_dssp             SSCEEEECCCTTCBHHHHHHTT
T ss_pred             CeEEEEEEccCCCcHHHHHHhh
Confidence            9999999999999999999754


No 76 
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.39  E-value=1.6e-14  Score=148.52  Aligned_cols=212  Identities=21%  Similarity=0.200  Sum_probs=106.9

Q ss_pred             CCCCCCCEEEccCCcCCcc-CchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEeeCC-cCCCC-CCccCCCCCC
Q 004275          106 GNLTFLQEVDLSRNYFNGS-LPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVLEDN-QLVGP-LPENLGNLKS  182 (764)
Q Consensus       106 ~~L~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N-~l~~~-~p~~l~~l~~  182 (764)
                      .....|++|||+++.++.. ++..+.++++|++|+|++|.+++..+..++.+++|++|+|+++ .++.. +..-+..+++
T Consensus        43 ~~~~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~l~~l~~~~~~  122 (284)
T d2astb2          43 FSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSR  122 (284)
T ss_dssp             CCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTT
T ss_pred             ccCCCCCEEECCCCccCHHHHHHHHHhCCCcccccccccCCCcHHHHHHhcCCCCcCccccccccccccccchhhHHHHh
Confidence            3445677777777766543 3444566777777777777766666666666777777777664 33311 1111234566


Q ss_pred             CcEEEccCcc-CCCC-CcccccC-CCCCcEEEccCc--cCCCc-CcccccCCCCCCEEeeeCCc-CCCCCccchhcCCCC
Q 004275          183 LRRILLSSNN-FTGS-IPESYGN-LKNLTEFRIDGS--NLTGR-IPNFIGNWTKLDRLDLQGTS-LEGPIPSTISQLKNL  255 (764)
Q Consensus       183 L~~L~Ls~N~-l~~~-~p~~~~~-l~~L~~L~L~~n--~l~~~-~p~~~~~l~~L~~L~L~~N~-l~~~~p~~l~~l~~L  255 (764)
                      |++|+++++. ++.. +...+.. .++|+.|+++++  .++.. +.....++++|++|++++|. +++..+..+.++++|
T Consensus       123 L~~L~ls~c~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~i~~~~l~~l~~~~~~L~~L~L~~~~~itd~~~~~l~~~~~L  202 (284)
T d2astb2         123 LDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYL  202 (284)
T ss_dssp             CCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTC
T ss_pred             ccccccccccccccccchhhhcccccccchhhhcccccccccccccccccccccccccccccccCCCchhhhhhcccCcC
Confidence            6666666642 3211 1111222 245666666543  22211 11222344555555555532 343334444444555


Q ss_pred             CEEEcCCCCCCCCCCCCccCCccccccccccccccccCCccccCCCCCCEEeccCCCCCCCccccccCCCCCCEEeccCC
Q 004275          256 TELRISDLKGSSSSFPNLQDMKKMERLILRNCLITGRIPEYIEDMTDLKILDLSFNQLTGPVPGILQNLKKIDYIFLTNN  335 (764)
Q Consensus       256 ~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N  335 (764)
                      ++|++++++                       .++......+.++++|+.|+++++--.+.++.....+++|+   +..+
T Consensus       203 ~~L~L~~C~-----------------------~i~~~~l~~L~~~~~L~~L~l~~~~~d~~l~~l~~~lp~L~---i~~~  256 (284)
T d2astb2         203 QHLSLSRCY-----------------------DIIPETLLELGEIPTLKTLQVFGIVPDGTLQLLKEALPHLQ---INCS  256 (284)
T ss_dssp             CEEECTTCT-----------------------TCCGGGGGGGGGCTTCCEEECTTSSCTTCHHHHHHHSTTSE---ESCC
T ss_pred             CEEECCCCC-----------------------CCChHHHHHHhcCCCCCEEeeeCCCCHHHHHHHHHhCcccc---ccCc
Confidence            555544422                       34433334455667777777776622222333334455544   4556


Q ss_pred             cCcCCCCh
Q 004275          336 SLSGTLPD  343 (764)
Q Consensus       336 ~l~g~~p~  343 (764)
                      .++...+.
T Consensus       257 ~ls~~~~~  264 (284)
T d2astb2         257 HFTTIARP  264 (284)
T ss_dssp             CSCCTTCS
T ss_pred             cCCCCCCC
Confidence            66654443


No 77 
>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.39  E-value=1.9e-13  Score=141.00  Aligned_cols=106  Identities=22%  Similarity=0.380  Sum_probs=91.6

Q ss_pred             cCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcC--hhcHHHHHHHHHHHHhCCCCCccceEEEEEECCEEEEEEc
Q 004275          659 NNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKS--KQGNREFVNEIGMISALQHQNLVKLYGCCIEGNQLLLVYE  735 (764)
Q Consensus       659 ~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  735 (764)
                      +.|+..+.||+|+||+||+|+. .+|+.||||+++...  ....+.+.+|++++++++|||||++++++...+..++|+|
T Consensus         2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~~   81 (292)
T d1unla_           2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEee
Confidence            4688899999999999999994 688999999985432  2335789999999999999999999999999999999999


Q ss_pred             ccCCCcHHHHHhcCCC--------------CCCCHHHHccccC
Q 004275          736 YLENNSLARALFGNAI--------------TKITYTFSLHLWN  764 (764)
Q Consensus       736 y~~~GsL~~~L~~~~~--------------~~l~~~~~~~i~h  764 (764)
                      |+.++++..+++....              .+|.|.|+.+|+|
T Consensus        82 ~~~~~~l~~~~~~~~~~~~~~~~~~~~q~~~aL~~lH~~~IvH  124 (292)
T d1unla_          82 FCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLH  124 (292)
T ss_dssp             CCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred             eccccccccccccccccchhHHHHHHHHHHHHHHHhhcCCEee
Confidence            9999999888875432              3588999999998


No 78 
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=99.36  E-value=1.2e-14  Score=153.91  Aligned_cols=250  Identities=16%  Similarity=0.119  Sum_probs=120.3

Q ss_pred             CccCCCCCCCCEEEccCCcCCcc----CchhhhcCCCCcEEecccCcCccc----------CCcCcCCCCCCCEEEeeCC
Q 004275          102 PEEFGNLTFLQEVDLSRNYFNGS----LPKSFARLQNLTKLLILGNRLSGS----------IPLEIGDISTLEELVLEDN  167 (764)
Q Consensus       102 p~~l~~L~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~n~l~~~----------~p~~~~~l~~L~~L~Ls~N  167 (764)
                      ...+...+.|++|+|++|.+...    +-..+...++|+.|+++++.....          +...+..+++|++|+|++|
T Consensus        24 ~~~L~~~~~l~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~l~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~L~~L~L~~n  103 (344)
T d2ca6a1          24 FAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDN  103 (344)
T ss_dssp             SHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSC
T ss_pred             HHHHhhCCCCCEEECcCCcCCHHHHHHHHHHHHhCCCCCEEECCCCcccccccccchHHHHHHHHHhhCCCccccccccc
Confidence            33455567777777777766532    223344556777777766543211          1122344556666666666


Q ss_pred             cCCCC----CCccCCCCCCCcEEEccCccCCCCCcccccCCCCCcEEEccCccCCCcCcccccCCCCCCEEeeeCCcCCC
Q 004275          168 QLVGP----LPENLGNLKSLRRILLSSNNFTGSIPESYGNLKNLTEFRIDGSNLTGRIPNFIGNWTKLDRLDLQGTSLEG  243 (764)
Q Consensus       168 ~l~~~----~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~  243 (764)
                      .+...    +...+...++|++|++++|.+...-...++..  |..+         .........+.|+.|++++|.++.
T Consensus       104 ~i~~~~~~~l~~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~--l~~~---------~~~~~~~~~~~L~~l~l~~n~i~~  172 (344)
T d2ca6a1         104 AFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARA--LQEL---------AVNKKAKNAPPLRSIICGRNRLEN  172 (344)
T ss_dssp             CCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHH--HHHH---------HHHHHHHTCCCCCEEECCSSCCTG
T ss_pred             ccccccccchhhhhcccccchheeccccccccccccccccc--cccc---------ccccccccCcccceeecccccccc
Confidence            55432    11223344556666666655431100000000  0000         000001223344455555544431


Q ss_pred             C----CccchhcCCCCCEEEcCCCCCCCCC-----CCCccCCcccccccccccccccc----CCccccCCCCCCEEeccC
Q 004275          244 P----IPSTISQLKNLTELRISDLKGSSSS-----FPNLQDMKKMERLILRNCLITGR----IPEYIEDMTDLKILDLSF  310 (764)
Q Consensus       244 ~----~p~~l~~l~~L~~L~L~~n~~~~~~-----~~~l~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~  310 (764)
                      .    +...+...+.|+.|+++.|.+....     ...+..+++|+.|++++|.++..    +...+..+++|++|+|++
T Consensus       173 ~~~~~l~~~l~~~~~L~~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~~~l~~~~~L~~L~Ls~  252 (344)
T d2ca6a1         173 GSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLND  252 (344)
T ss_dssp             GGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTT
T ss_pred             cccccccchhhhhhhhcccccccccccccccccchhhhhcchhhhcccccccccccccccccccccccccccchhhhhhc
Confidence            1    1222334455555555554332210     11244556666666666666432    233455667777777777


Q ss_pred             CCCCCCcc----ccccC--CCCCCEEeccCCcCcCCC----Chhh---hcCCCeEEeecCcCCCC
Q 004275          311 NQLTGPVP----GILQN--LKKIDYIFLTNNSLSGTL----PDWI---LTSEKNLDLSYNNFTES  362 (764)
Q Consensus       311 N~l~g~~p----~~~~~--l~~L~~L~L~~N~l~g~~----p~~~---~~~l~~L~Ls~N~l~~~  362 (764)
                      |.|++.-.    ..+..  .+.|+.|++++|+++..-    ...+   .+.++.|+|++|+|...
T Consensus       253 n~i~~~g~~~l~~~l~~~~~~~L~~L~ls~N~i~~~~~~~l~~~l~~~~~~L~~L~l~~N~~~~~  317 (344)
T d2ca6a1         253 CLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEE  317 (344)
T ss_dssp             CCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTT
T ss_pred             CccCchhhHHHHHHhhhccCCCCCEEECCCCcCChHHHHHHHHHHHccCCCCCEEECCCCcCCCc
Confidence            77764322    22222  356777777777776421    2222   23467788888887653


No 79 
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.36  E-value=1.4e-14  Score=158.62  Aligned_cols=253  Identities=17%  Similarity=0.161  Sum_probs=169.3

Q ss_pred             CCCEEEccCCcCCcc-CchhhhcCCCCcEEecccCcCcc----cCCcCcCCCCCCCEEEeeCCcCCCC----CCccCC-C
Q 004275          110 FLQEVDLSRNYFNGS-LPKSFARLQNLTKLLILGNRLSG----SIPLEIGDISTLEELVLEDNQLVGP----LPENLG-N  179 (764)
Q Consensus       110 ~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~n~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~l~-~  179 (764)
                      +|++||+++|++++. +...+..+++|+.|+|++|.++.    .+...+..+++|++|||++|+++..    +...+. .
T Consensus         3 ~l~~ld~~~~~i~~~~~~~l~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~~~l~~~l~~~   82 (460)
T d1z7xw1           3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTP   82 (460)
T ss_dssp             EEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCST
T ss_pred             CCCEEEeeCCcCChHHHHHHHHhCCCCCEEEeCCCCCCHHHHHHHHHHHhcCCCCCEEECcCCcCChHHHHHHHHHHhcC
Confidence            589999999999864 24456778999999999999873    3455677899999999999998521    222332 3


Q ss_pred             CCCCcEEEccCccCCCC----CcccccCCCCCcEEEccCccCCCcCc---------------------------------
Q 004275          180 LKSLRRILLSSNNFTGS----IPESYGNLKNLTEFRIDGSNLTGRIP---------------------------------  222 (764)
Q Consensus       180 l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~n~l~~~~p---------------------------------  222 (764)
                      .++|++|+|++|+++..    ++..+..+++|++|++++|.++..-.                                 
T Consensus        83 ~~~L~~L~L~~n~it~~~~~~l~~~l~~~~~L~~L~L~~N~i~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (460)
T d1z7xw1          83 SCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLA  162 (460)
T ss_dssp             TCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHH
T ss_pred             CCCCCEEECCCCCccccccccccchhhccccccccccccccchhhhhhhhhhcccccccccccccccccccchhhhcccc
Confidence            35899999999999753    45667889999999999987642100                                 


Q ss_pred             ccccCCCCCC---------------------------------------------------------EEeeeCCcCCC--
Q 004275          223 NFIGNWTKLD---------------------------------------------------------RLDLQGTSLEG--  243 (764)
Q Consensus       223 ~~~~~l~~L~---------------------------------------------------------~L~L~~N~l~~--  243 (764)
                      ..+.....++                                                         .+++..|.+..  
T Consensus       163 ~~l~~~~~~~~~~ls~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~n~~~~~~  242 (460)
T d1z7xw1         163 SVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVG  242 (460)
T ss_dssp             HHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHH
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccchhhhcccccccccccccccchhhccccccc
Confidence            0000111222                                                         22222222210  


Q ss_pred             ---CCccchhcCCCCCEEEcCCCCCCCCCCC----CccCCccccccccccccccccCCcc-----ccCCCCCCEEeccCC
Q 004275          244 ---PIPSTISQLKNLTELRISDLKGSSSSFP----NLQDMKKMERLILRNCLITGRIPEY-----IEDMTDLKILDLSFN  311 (764)
Q Consensus       244 ---~~p~~l~~l~~L~~L~L~~n~~~~~~~~----~l~~l~~L~~L~Ls~N~l~~~~p~~-----~~~l~~L~~L~Ls~N  311 (764)
                         ..+........++.+++++|........    .+...+.++.+++++|.++......     ......|+.+++++|
T Consensus       243 ~~~~~~~~~~~~~~l~~l~l~~n~i~~~~~~~~~~~l~~~~~l~~l~l~~n~i~~~~~~~l~~~l~~~~~~L~~l~l~~~  322 (460)
T d1z7xw1         243 MAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSC  322 (460)
T ss_dssp             HHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTS
T ss_pred             cchhhcccccccccccccccccccccccccccccccccccccccccccccccccccccchhhcccccccccccccccccc
Confidence               0111123356799999998654432211    1455788999999999987432221     123468999999999


Q ss_pred             CCCCCcc----ccccCCCCCCEEeccCCcCcCC----CChhhh---cCCCeEEeecCcCCCC
Q 004275          312 QLTGPVP----GILQNLKKIDYIFLTNNSLSGT----LPDWIL---TSEKNLDLSYNNFTES  362 (764)
Q Consensus       312 ~l~g~~p----~~~~~l~~L~~L~L~~N~l~g~----~p~~~~---~~l~~L~Ls~N~l~~~  362 (764)
                      .++....    ..+...++|+.|+|++|+++..    +++.+.   ..++.|+|++|+|+..
T Consensus       323 ~l~~~~~~~l~~~~~~~~~L~~L~Ls~N~i~~~g~~~l~~~l~~~~~~L~~L~Ls~n~i~~~  384 (460)
T d1z7xw1         323 SFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDS  384 (460)
T ss_dssp             CCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHH
T ss_pred             chhhhhhhhcccccccccchhhhheeeecccCcccchhhhhhhcccCCCCEEECCCCCCChH
Confidence            9985432    3445667899999999999753    333332   3478999999999863


No 80 
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=99.35  E-value=9.4e-14  Score=146.91  Aligned_cols=217  Identities=18%  Similarity=0.196  Sum_probs=135.7

Q ss_pred             CchhhhcCCCCcEEecccCcCccc----CCcCcCCCCCCCEEEeeCCcCCCCC---C-------ccCCCCCCCcEEEccC
Q 004275          125 LPKSFARLQNLTKLLILGNRLSGS----IPLEIGDISTLEELVLEDNQLVGPL---P-------ENLGNLKSLRRILLSS  190 (764)
Q Consensus       125 ~p~~~~~l~~L~~L~Ls~n~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~---p-------~~l~~l~~L~~L~Ls~  190 (764)
                      +...+.....|+.|+|++|.+...    +-..+...++|+.|+++++......   |       ..+...++|+.|+|++
T Consensus        23 l~~~L~~~~~l~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~l~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~L~~L~L~~  102 (344)
T d2ca6a1          23 VFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSD  102 (344)
T ss_dssp             TSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCS
T ss_pred             HHHHHhhCCCCCEEECcCCcCCHHHHHHHHHHHHhCCCCCEEECCCCcccccccccchHHHHHHHHHhhCCCcccccccc
Confidence            445567778888888888877532    2334566677777777766543111   1       1223445555555555


Q ss_pred             ccCCCCCcccccCCCCCcEEEccCccCCCcCcccccCCCCCCEEeeeCCcCCCCC-------------ccchhcCCCCCE
Q 004275          191 NNFTGSIPESYGNLKNLTEFRIDGSNLTGRIPNFIGNWTKLDRLDLQGTSLEGPI-------------PSTISQLKNLTE  257 (764)
Q Consensus       191 N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~-------------p~~l~~l~~L~~  257 (764)
                      |.++..-...                    +...+...++|++|++++|.+...-             .......+.|+.
T Consensus       103 n~i~~~~~~~--------------------l~~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~~~~~~~~~~L~~  162 (344)
T d2ca6a1         103 NAFGPTAQEP--------------------LIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRS  162 (344)
T ss_dssp             CCCCTTTHHH--------------------HHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCE
T ss_pred             cccccccccc--------------------hhhhhcccccchheecccccccccccccccccccccccccccccCcccce
Confidence            5554321111                    1222333455555555555543110             011235678999


Q ss_pred             EEcCCCCCCCCCCCC----ccCCcccccccccccccccc-----CCccccCCCCCCEEeccCCCCCCC----ccccccCC
Q 004275          258 LRISDLKGSSSSFPN----LQDMKKMERLILRNCLITGR-----IPEYIEDMTDLKILDLSFNQLTGP----VPGILQNL  324 (764)
Q Consensus       258 L~L~~n~~~~~~~~~----l~~l~~L~~L~Ls~N~l~~~-----~p~~~~~l~~L~~L~Ls~N~l~g~----~p~~~~~l  324 (764)
                      +.+++++........    +...+.|+.|++++|.++..     +...+..+++|+.|++++|.++..    +...+..+
T Consensus       163 l~l~~n~i~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~~~l~~~  242 (344)
T d2ca6a1         163 IICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSW  242 (344)
T ss_dssp             EECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGC
T ss_pred             eecccccccccccccccchhhhhhhhcccccccccccccccccchhhhhcchhhhccccccccccccccccccccccccc
Confidence            999987654333222    45678899999999998742     334567789999999999998642    44567889


Q ss_pred             CCCCEEeccCCcCcCCCChhh--------hcCCCeEEeecCcCCC
Q 004275          325 KKIDYIFLTNNSLSGTLPDWI--------LTSEKNLDLSYNNFTE  361 (764)
Q Consensus       325 ~~L~~L~L~~N~l~g~~p~~~--------~~~l~~L~Ls~N~l~~  361 (764)
                      ++|++|++++|.|++.-...+        ...++.||+++|+++.
T Consensus       243 ~~L~~L~Ls~n~i~~~g~~~l~~~l~~~~~~~L~~L~ls~N~i~~  287 (344)
T d2ca6a1         243 PNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIEL  287 (344)
T ss_dssp             TTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBH
T ss_pred             ccchhhhhhcCccCchhhHHHHHHhhhccCCCCCEEECCCCcCCh
Confidence            999999999999985432222        1346799999999875


No 81 
>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.34  E-value=3.8e-13  Score=139.27  Aligned_cols=94  Identities=22%  Similarity=0.448  Sum_probs=74.9

Q ss_pred             HhhcCccccCeeeccCCeeEEEEEEc------CCCEEEEEEcCCcC-hhcHHHHHHHHHHHHhC-CCCCccceEEEEEEC
Q 004275          656 AATNNFDAANKIGEGGFGPVYKGTLS------DGAVIAVKQLSSKS-KQGNREFVNEIGMISAL-QHQNLVKLYGCCIEG  727 (764)
Q Consensus       656 ~~~~~~~~~~~iG~G~~g~Vy~~~~~------~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~  727 (764)
                      ...++|+..+.||+|+||.||+|+..      +++.||||++.... ....++|.+|++.+.++ +|+|||++++++...
T Consensus        10 i~~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~   89 (299)
T d1ywna1          10 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP   89 (299)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECST
T ss_pred             ccHHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccC
Confidence            34467889999999999999999853      34689999997543 33456788999988877 689999999998765


Q ss_pred             -CEEEEEEcccCCCcHHHHHhcC
Q 004275          728 -NQLLLVYEYLENNSLARALFGN  749 (764)
Q Consensus       728 -~~~~lv~Ey~~~GsL~~~L~~~  749 (764)
                       +..++|||||++|+|.++|+..
T Consensus        90 ~~~~~iv~E~~~~g~L~~~l~~~  112 (299)
T d1ywna1          90 GGPLMVIVEFCKFGNLSTYLRSK  112 (299)
T ss_dssp             TSCCEEEEECCTTCBHHHHHHHT
T ss_pred             CCeEEEEEEecCCCcHHHHHHhc
Confidence             4689999999999999999753


No 82 
>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}
Probab=99.33  E-value=3e-13  Score=142.04  Aligned_cols=103  Identities=17%  Similarity=0.371  Sum_probs=86.3

Q ss_pred             cCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcChhcHHHHHHHHHHHHhCC-CCCccceEEEEEEC--CEEEEEE
Q 004275          659 NNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKSKQGNREFVNEIGMISALQ-HQNLVKLYGCCIEG--NQLLLVY  734 (764)
Q Consensus       659 ~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~--~~~~lv~  734 (764)
                      ++|+..+.||+|+||+||+|+. .+|+.||||++...   ..+++.+|+++|.+++ |||||++++++...  ...++||
T Consensus        35 d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~---~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v~  111 (328)
T d3bqca1          35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF  111 (328)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSS---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEEE
T ss_pred             cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHH---HHHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeEEE
Confidence            4688999999999999999995 67899999999754   3467899999999996 99999999998754  4589999


Q ss_pred             cccCCCcHHHHHhcCC-----------CCCCCHHHHccccC
Q 004275          735 EYLENNSLARALFGNA-----------ITKITYTFSLHLWN  764 (764)
Q Consensus       735 Ey~~~GsL~~~L~~~~-----------~~~l~~~~~~~i~h  764 (764)
                      |||++|+|.++.+.-.           ..+|++.|..+|+|
T Consensus       112 e~~~~~~L~~~~~~l~e~~i~~i~~qil~aL~~LH~~gIvH  152 (328)
T d3bqca1         112 EHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMH  152 (328)
T ss_dssp             ECCCSCBGGGTTTSCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred             eecCCCcHHHHhcCCCHHHHHHHHHHHHHHHHHHhhccccc
Confidence            9999999976643211           24689999999998


No 83 
>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.32  E-value=4.1e-13  Score=142.19  Aligned_cols=107  Identities=17%  Similarity=0.291  Sum_probs=89.0

Q ss_pred             hcCccccCeeeccCCeeEEEEE-EcCCCEEEEEEcCCcC--hhcHHHHHHHHHHHHhCCCCCccceEEEEEEC-----CE
Q 004275          658 TNNFDAANKIGEGGFGPVYKGT-LSDGAVIAVKQLSSKS--KQGNREFVNEIGMISALQHQNLVKLYGCCIEG-----NQ  729 (764)
Q Consensus       658 ~~~~~~~~~iG~G~~g~Vy~~~-~~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~-----~~  729 (764)
                      .+.|+..+.||+|+||+||+|+ ..+|+.||||++....  ....+.+.+|++++++++|||+|++++++...     ..
T Consensus        17 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~   96 (348)
T d2gfsa1          17 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN   96 (348)
T ss_dssp             ETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCC
T ss_pred             CCCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCc
Confidence            4568899999999999999998 4679999999997542  33456789999999999999999999998643     33


Q ss_pred             EEEEEcccCCCcHHHHHhcCCC-------------CCCCHHHHccccC
Q 004275          730 LLLVYEYLENNSLARALFGNAI-------------TKITYTFSLHLWN  764 (764)
Q Consensus       730 ~~lv~Ey~~~GsL~~~L~~~~~-------------~~l~~~~~~~i~h  764 (764)
                      .++++||+.+|+|.++++.+..             .+|++.|+.+|+|
T Consensus        97 ~~~i~~~~~gg~L~~~~~~~~l~e~~~~~i~~qil~aL~~LH~~giiH  144 (348)
T d2gfsa1          97 DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIH  144 (348)
T ss_dssp             CCEEEEECCSEEHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred             eEEEEEeecCCchhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence            4677888899999999976532             3689999999998


No 84 
>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.31  E-value=1.9e-13  Score=139.46  Aligned_cols=106  Identities=17%  Similarity=0.329  Sum_probs=87.0

Q ss_pred             cCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcCh------hcHHHHHHHHHHHHhCC--CCCccceEEEEEECCE
Q 004275          659 NNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKSK------QGNREFVNEIGMISALQ--HQNLVKLYGCCIEGNQ  729 (764)
Q Consensus       659 ~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~------~~~~~f~~E~~~l~~l~--H~niv~l~g~~~~~~~  729 (764)
                      +.|+..+.||+|+||+||+|+. .+|+.||||++.....      ....++.+|++++++++  |||||++++++.+.+.
T Consensus         4 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~~   83 (273)
T d1xwsa_           4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS   83 (273)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSE
T ss_pred             CeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCCe
Confidence            4688899999999999999994 6799999999864321      11234778999999987  9999999999999999


Q ss_pred             EEEEEcccCC-CcHHHHHhcCCC--------------CCCCHHHHccccC
Q 004275          730 LLLVYEYLEN-NSLARALFGNAI--------------TKITYTFSLHLWN  764 (764)
Q Consensus       730 ~~lv~Ey~~~-GsL~~~L~~~~~--------------~~l~~~~~~~i~h  764 (764)
                      .++||||+++ +++.+++.....              .++.|.|..+|+|
T Consensus        84 ~~lv~e~~~~~~~l~~~~~~~~~l~e~~~~~~~~qi~~al~~lH~~~iiH  133 (273)
T d1xwsa_          84 FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLH  133 (273)
T ss_dssp             EEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred             EEEEEEeccCcchHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCcc
Confidence            9999999986 688888764321              3588999999988


No 85 
>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.31  E-value=6.5e-13  Score=140.48  Aligned_cols=106  Identities=17%  Similarity=0.366  Sum_probs=81.9

Q ss_pred             hcCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCc--ChhcHHHHHHHHHHHHhCCCCCccceEEEEEECC------
Q 004275          658 TNNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSK--SKQGNREFVNEIGMISALQHQNLVKLYGCCIEGN------  728 (764)
Q Consensus       658 ~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~------  728 (764)
                      .+.|+..+.||+|+||+||+|+. .+|+.||||++...  .....+.+.+|+++|++++|||||+++++|...+      
T Consensus        17 ~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~   96 (346)
T d1cm8a_          17 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT   96 (346)
T ss_dssp             BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred             CCcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccccc
Confidence            45688899999999999999994 67999999999753  2334567899999999999999999999998654      


Q ss_pred             EEEEEEcccCCCcHHHHHhcCCC-------------CCCCHHHHccccC
Q 004275          729 QLLLVYEYLENNSLARALFGNAI-------------TKITYTFSLHLWN  764 (764)
Q Consensus       729 ~~~lv~Ey~~~GsL~~~L~~~~~-------------~~l~~~~~~~i~h  764 (764)
                      ..++||||| +++|.++.+....             .+|.|.|..+|+|
T Consensus        97 ~~~lv~e~~-~~~l~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~IiH  144 (346)
T d1cm8a_          97 DFYLVMPFM-GTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIH  144 (346)
T ss_dssp             CCEEEEECC-SEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred             eEEEEEecc-cccHHHHHHhccccHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence            469999999 4578887765431             4689999999998


No 86 
>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.31  E-value=3.8e-13  Score=140.55  Aligned_cols=106  Identities=19%  Similarity=0.282  Sum_probs=89.8

Q ss_pred             cCccccCeeeccCCeeEEEEEE----cCCCEEEEEEcCCcC----hhcHHHHHHHHHHHHhCCC-CCccceEEEEEECCE
Q 004275          659 NNFDAANKIGEGGFGPVYKGTL----SDGAVIAVKQLSSKS----KQGNREFVNEIGMISALQH-QNLVKLYGCCIEGNQ  729 (764)
Q Consensus       659 ~~~~~~~~iG~G~~g~Vy~~~~----~~g~~vAvK~l~~~~----~~~~~~f~~E~~~l~~l~H-~niv~l~g~~~~~~~  729 (764)
                      ++|+..+.||+|+||+||+|+.    .+|+.||||.++...    ....+.+.+|++++++++| ||||++++++.+...
T Consensus        24 ~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~~  103 (322)
T d1vzoa_          24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK  103 (322)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred             hceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCCc
Confidence            5589999999999999999984    257899999996532    1234568899999999977 799999999999999


Q ss_pred             EEEEEcccCCCcHHHHHhcCCC--------------CCCCHHHHccccC
Q 004275          730 LLLVYEYLENNSLARALFGNAI--------------TKITYTFSLHLWN  764 (764)
Q Consensus       730 ~~lv~Ey~~~GsL~~~L~~~~~--------------~~l~~~~~~~i~h  764 (764)
                      .++|||||++|+|.+++.....              .++.+.|..+|+|
T Consensus       104 ~~~v~e~~~~~~L~~~i~~~~~~~e~~~~~~~~Qi~~al~~lH~~~ivH  152 (322)
T d1vzoa_         104 LHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIY  152 (322)
T ss_dssp             EEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred             eeeeeecccccHHHHHHHhcccccHHHHHHHHHHHHHHHHHhhcCCEEe
Confidence            9999999999999999975432              3588999999998


No 87 
>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.30  E-value=7.4e-13  Score=139.93  Aligned_cols=107  Identities=17%  Similarity=0.266  Sum_probs=84.6

Q ss_pred             hcCccccCeeeccCCeeEEEEE-EcCCCEEEEEEcCCcC-hhcHHHHHHHHHHHHhCCCCCccceEEEEEECC----EEE
Q 004275          658 TNNFDAANKIGEGGFGPVYKGT-LSDGAVIAVKQLSSKS-KQGNREFVNEIGMISALQHQNLVKLYGCCIEGN----QLL  731 (764)
Q Consensus       658 ~~~~~~~~~iG~G~~g~Vy~~~-~~~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~----~~~  731 (764)
                      ++.|...+.||+|+||+||+|+ ..+|+.||||+++... ....+.+.+|+++|++++|||||++++++....    ..+
T Consensus         7 ~~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~   86 (345)
T d1pmea_           7 GPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV   86 (345)
T ss_dssp             CTTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred             CCCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceE
Confidence            3568889999999999999998 4689999999997543 334568999999999999999999999997643    234


Q ss_pred             EEEcccCCCcHHHHHhcCCC-------------CCCCHHHHccccC
Q 004275          732 LVYEYLENNSLARALFGNAI-------------TKITYTFSLHLWN  764 (764)
Q Consensus       732 lv~Ey~~~GsL~~~L~~~~~-------------~~l~~~~~~~i~h  764 (764)
                      +++||+.+|+|.+++.....             .++.|.|+.+|+|
T Consensus        87 ~l~~~~~~g~L~~~l~~~~l~~~~i~~i~~qil~al~yLH~~~iiH  132 (345)
T d1pmea_          87 YLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLH  132 (345)
T ss_dssp             EEEEECCCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred             EEEEeecCCchhhhhhcCCCCHHHHHHHHHHHHHHHHHHHHCCCcC
Confidence            55667789999999975432             3689999999998


No 88 
>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.28  E-value=1.2e-12  Score=136.64  Aligned_cols=107  Identities=21%  Similarity=0.391  Sum_probs=84.4

Q ss_pred             hcCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCc--ChhcHHHHHHHHHHHHhCCCCCccceEEEEEEC-------
Q 004275          658 TNNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSK--SKQGNREFVNEIGMISALQHQNLVKLYGCCIEG-------  727 (764)
Q Consensus       658 ~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~-------  727 (764)
                      .++|+..+.||+|+||+||+|+. .+|+.||||++...  .....+++.+|+++|++++|+||+++++++...       
T Consensus         9 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~   88 (318)
T d3blha1           9 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC   88 (318)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC--------
T ss_pred             cCCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeeccccccccc
Confidence            36688999999999999999995 68999999998643  223456799999999999999999999998653       


Q ss_pred             -CEEEEEEcccCCCcHHHHHhcCC--------------CCCCCHHHHccccC
Q 004275          728 -NQLLLVYEYLENNSLARALFGNA--------------ITKITYTFSLHLWN  764 (764)
Q Consensus       728 -~~~~lv~Ey~~~GsL~~~L~~~~--------------~~~l~~~~~~~i~h  764 (764)
                       +..++|||||++|.+..+.....              ..++.|.|..+|+|
T Consensus        89 ~~~~~iv~e~~~~~~~~~~~~~~~~~~~~~~~~i~~qil~~l~~lH~~~ivH  140 (318)
T d3blha1          89 KGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILH  140 (318)
T ss_dssp             --CEEEEEECCCEEHHHHHTCTTCCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred             CceEEEEEeccCCCccchhhhcccccccHHHHHHHHHHHHHHHHhccCCEEe
Confidence             35799999999887655443321              13689999999998


No 89 
>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.28  E-value=1.3e-12  Score=138.52  Aligned_cols=105  Identities=19%  Similarity=0.298  Sum_probs=83.8

Q ss_pred             cCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCc--ChhcHHHHHHHHHHHHhCCCCCccceEEEEEEC------CE
Q 004275          659 NNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSK--SKQGNREFVNEIGMISALQHQNLVKLYGCCIEG------NQ  729 (764)
Q Consensus       659 ~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~------~~  729 (764)
                      +.|+..++||+|+||+||+|+. .+|+.||||++...  .....+.+.+|++++++++|||||++++++...      ..
T Consensus        17 ~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~~   96 (355)
T d2b1pa1          17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQD   96 (355)
T ss_dssp             TTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCE
T ss_pred             CCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCce
Confidence            5688999999999999999995 57999999999653  233446789999999999999999999999643      57


Q ss_pred             EEEEEcccCCCcHHHHHhcCC------------CCCCCHHHHccccC
Q 004275          730 LLLVYEYLENNSLARALFGNA------------ITKITYTFSLHLWN  764 (764)
Q Consensus       730 ~~lv~Ey~~~GsL~~~L~~~~------------~~~l~~~~~~~i~h  764 (764)
                      .|+|||||.+| +.+.++..-            ..++.+.|+.+|+|
T Consensus        97 ~~iv~Ey~~~~-l~~~~~~~~~~~~i~~~~~qil~gl~~LH~~giiH  142 (355)
T d2b1pa1          97 VYLVMELMDAN-LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIH  142 (355)
T ss_dssp             EEEEEECCSEE-HHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred             eEEEEeccchH-HHHhhhcCCCHHHHHHHHHHHHHHHHHhhhccccc
Confidence            89999999765 555555432            14689999999998


No 90 
>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.26  E-value=1.7e-12  Score=137.37  Aligned_cols=101  Identities=24%  Similarity=0.438  Sum_probs=78.5

Q ss_pred             CccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcChhcHHHHHHHHHHHHhCCCCCccceEEEEEECC------EEEE
Q 004275          660 NFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKSKQGNREFVNEIGMISALQHQNLVKLYGCCIEGN------QLLL  732 (764)
Q Consensus       660 ~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~------~~~l  732 (764)
                      .|+..++||+|+||+||+|+. .+|+.||||++.....    .+.+|+++|++++|+|||++++++....      ..++
T Consensus        21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~----~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~l   96 (350)
T d1q5ka_          21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL   96 (350)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS----SCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEE
T ss_pred             CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccch----HHHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEE
Confidence            377788999999999999995 5799999999965432    2347999999999999999999986543      4789


Q ss_pred             EEcccCCCcHHHHHh---cCC--------------CCCCCHHHHccccC
Q 004275          733 VYEYLENNSLARALF---GNA--------------ITKITYTFSLHLWN  764 (764)
Q Consensus       733 v~Ey~~~GsL~~~L~---~~~--------------~~~l~~~~~~~i~h  764 (764)
                      |||||++|.+....+   ...              ..+|.|.|..+|+|
T Consensus        97 v~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~IiH  145 (350)
T d1q5ka_          97 VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICH  145 (350)
T ss_dssp             EEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEEC
T ss_pred             EEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhcCCcc
Confidence            999999774433322   111              13688999999998


No 91 
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=99.24  E-value=1.2e-13  Score=133.60  Aligned_cols=130  Identities=19%  Similarity=0.287  Sum_probs=68.8

Q ss_pred             CchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEeeCCcCCCCCCccCCCCCCCcEEEccCccCCCCCcccccCC
Q 004275          125 LPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVLEDNQLVGPLPENLGNLKSLRRILLSSNNFTGSIPESYGNL  204 (764)
Q Consensus       125 ~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l  204 (764)
                      +|.++..+++|++|+|++|+++ .++ .+..+++|++|+|++|.++ .+|..+..+++|++|++++|+++. + ..+..+
T Consensus        40 l~~sl~~L~~L~~L~Ls~n~I~-~i~-~l~~l~~L~~L~Ls~N~i~-~i~~~~~~~~~L~~L~l~~N~i~~-l-~~~~~l  114 (198)
T d1m9la_          40 MDATLSTLKACKHLALSTNNIE-KIS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-L-SGIEKL  114 (198)
T ss_dssp             CHHHHHHTTTCCEEECSEEEES-CCC-CHHHHTTCCEEECCEEEEC-SCSSHHHHHHHCCEEECSEEECCC-H-HHHHHH
T ss_pred             hhhHHhcccccceeECcccCCC-Ccc-cccCCccccChhhcccccc-cccccccccccccccccccccccc-c-cccccc
Confidence            3445555555555555555555 232 3555555555555555554 333333334456666666666553 2 235556


Q ss_pred             CCCcEEEccCccCCCcCc-ccccCCCCCCEEeeeCCcCCCCCcc----------chhcCCCCCEEE
Q 004275          205 KNLTEFRIDGSNLTGRIP-NFIGNWTKLDRLDLQGTSLEGPIPS----------TISQLKNLTELR  259 (764)
Q Consensus       205 ~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~----------~l~~l~~L~~L~  259 (764)
                      ++|+.|++++|+++.... ..+..+++|+.|++++|.+....+.          .+..+++|+.||
T Consensus       115 ~~L~~L~L~~N~i~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~r~~vi~~lp~L~~LD  180 (198)
T d1m9la_         115 VNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD  180 (198)
T ss_dssp             HHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSSHHHHHHCTTTTHHHHHHHHHHHCSSCCEES
T ss_pred             ccccccccccchhccccccccccCCCccceeecCCCccccCcccccchhhHHHHHHHHCCCcCEeC
Confidence            666666666666653211 3456666666666666665432221          145566666665


No 92 
>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.18  E-value=1.1e-11  Score=128.42  Aligned_cols=107  Identities=21%  Similarity=0.439  Sum_probs=80.9

Q ss_pred             hcCccccCeeeccCCeeEEEEEE-cC-CCEEEEEEcCCcC--hhcHHHHHHHHHHHHhC---CCCCccceEEEEEEC---
Q 004275          658 TNNFDAANKIGEGGFGPVYKGTL-SD-GAVIAVKQLSSKS--KQGNREFVNEIGMISAL---QHQNLVKLYGCCIEG---  727 (764)
Q Consensus       658 ~~~~~~~~~iG~G~~g~Vy~~~~-~~-g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l---~H~niv~l~g~~~~~---  727 (764)
                      .++|+..+.||+|+||+||+|+. .+ ++.||||++....  ......+.+|+++++.+   +|||||++++++...   
T Consensus         6 ~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~   85 (305)
T d1blxa_           6 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD   85 (305)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECS
T ss_pred             cCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeecccccc
Confidence            46799999999999999999985 34 5679999986432  22234566787776654   899999999998642   


Q ss_pred             --CEEEEEEcccCCCcHHHHHhcCC---------------CCCCCHHHHccccC
Q 004275          728 --NQLLLVYEYLENNSLARALFGNA---------------ITKITYTFSLHLWN  764 (764)
Q Consensus       728 --~~~~lv~Ey~~~GsL~~~L~~~~---------------~~~l~~~~~~~i~h  764 (764)
                        ...+++||||++|++........               ..+|.|.|..+|+|
T Consensus        86 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ivH  139 (305)
T d1blxa_          86 RETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVH  139 (305)
T ss_dssp             SEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred             cCceEEEEEEeccCCchhhhhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEEe
Confidence              36799999999987765544321               13588999999998


No 93 
>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=99.17  E-value=1.7e-11  Score=126.16  Aligned_cols=103  Identities=22%  Similarity=0.303  Sum_probs=85.6

Q ss_pred             cCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcChhcHHHHHHHHHHHHhCCC-CCccceEEEEEECCEEEEEEcc
Q 004275          659 NNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKSKQGNREFVNEIGMISALQH-QNLVKLYGCCIEGNQLLLVYEY  736 (764)
Q Consensus       659 ~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H-~niv~l~g~~~~~~~~~lv~Ey  736 (764)
                      ++|+..+.||+|+||+||+|+. .+|+.||||.+.....  .+++.+|++.+..++| +|++.+++++......++||||
T Consensus         5 ~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme~   82 (293)
T d1csna_           5 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD--APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDL   82 (293)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT--SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEEC
T ss_pred             CceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEccccC--cHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEEEe
Confidence            4688899999999999999994 5788999999855332  2357788899999875 8999999999999999999999


Q ss_pred             cCCCcHHHHHhcCCC---------------CCCCHHHHccccC
Q 004275          737 LENNSLARALFGNAI---------------TKITYTFSLHLWN  764 (764)
Q Consensus       737 ~~~GsL~~~L~~~~~---------------~~l~~~~~~~i~h  764 (764)
                      + +|+|.++++....               .++.+.|+.+|+|
T Consensus        83 ~-~~~l~~~~~~~~~~~~~~~~~~i~~q~~~~l~~lH~~giiH  124 (293)
T d1csna_          83 L-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVY  124 (293)
T ss_dssp             C-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEEC
T ss_pred             c-CCCHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHHCCcee
Confidence            9 5899999875431               2588889999988


No 94 
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=99.17  E-value=1e-13  Score=134.15  Aligned_cols=130  Identities=24%  Similarity=0.323  Sum_probs=106.0

Q ss_pred             CCccCCCCCCCCEEEccCCcCCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEeeCCcCCCCCCccCCCC
Q 004275          101 IPEEFGNLTFLQEVDLSRNYFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVLEDNQLVGPLPENLGNL  180 (764)
Q Consensus       101 ~p~~l~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l  180 (764)
                      +|.++..|++|++|+|++|+|+. ++ .+..+++|++|+|++|.++ .+|..+..+++|++|++++|+++. + +.+..+
T Consensus        40 l~~sl~~L~~L~~L~Ls~n~I~~-i~-~l~~l~~L~~L~Ls~N~i~-~i~~~~~~~~~L~~L~l~~N~i~~-l-~~~~~l  114 (198)
T d1m9la_          40 MDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-L-SGIEKL  114 (198)
T ss_dssp             CHHHHHHTTTCCEEECSEEEESC-CC-CHHHHTTCCEEECCEEEEC-SCSSHHHHHHHCCEEECSEEECCC-H-HHHHHH
T ss_pred             hhhHHhcccccceeECcccCCCC-cc-cccCCccccChhhcccccc-cccccccccccccccccccccccc-c-cccccc
Confidence            45678889999999999999984 55 5899999999999999997 566655666789999999999984 3 347888


Q ss_pred             CCCcEEEccCccCCCCCc-ccccCCCCCcEEEccCccCCCcCcc----------cccCCCCCCEEe
Q 004275          181 KSLRRILLSSNNFTGSIP-ESYGNLKNLTEFRIDGSNLTGRIPN----------FIGNWTKLDRLD  235 (764)
Q Consensus       181 ~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~n~l~~~~p~----------~~~~l~~L~~L~  235 (764)
                      ++|++|++++|+++.... ..+..+++|+.|++++|.+....+.          .+..+++|+.||
T Consensus       115 ~~L~~L~L~~N~i~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~r~~vi~~lp~L~~LD  180 (198)
T d1m9la_         115 VNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD  180 (198)
T ss_dssp             HHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSSHHHHHHCTTTTHHHHHHHHHHHCSSCCEES
T ss_pred             ccccccccccchhccccccccccCCCccceeecCCCccccCcccccchhhHHHHHHHHCCCcCEeC
Confidence            999999999999985322 4688999999999999988654332          256789999987


No 95 
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.13  E-value=4.3e-11  Score=110.58  Aligned_cols=103  Identities=18%  Similarity=0.094  Sum_probs=75.8

Q ss_pred             EEcCCCcccccCCccCCCCCCCCEEEccCC-cCCccCchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEeeCCc
Q 004275           90 ILLKGFNLAGVIPEEFGNLTFLQEVDLSRN-YFNGSLPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVLEDNQ  168 (764)
Q Consensus        90 L~L~~~~l~g~~p~~l~~L~~L~~L~Ls~N-~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~  168 (764)
                      ++.+++++.. .|..+..+++|++|++++| .++...+.+|..+++|+.|+|++|+++...|..|..+++|++|+|++|+
T Consensus        13 l~c~~~~~~~-~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~N~   91 (156)
T d2ifga3          13 LRCTRDGALD-SLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNA   91 (156)
T ss_dssp             EECCSSCCCT-TTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSC
T ss_pred             EEecCCCCcc-CcccccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCcccccccccccccceeccCCC
Confidence            6667766653 5667778888888888765 4776666778888888888888888887667778888888888888888


Q ss_pred             CCCCCCccCCCCCCCcEEEccCccCC
Q 004275          169 LVGPLPENLGNLKSLRRILLSSNNFT  194 (764)
Q Consensus       169 l~~~~p~~l~~l~~L~~L~Ls~N~l~  194 (764)
                      ++ .+|.......+|+.|+|++|.+.
T Consensus        92 l~-~l~~~~~~~~~l~~L~L~~Np~~  116 (156)
T d2ifga3          92 LE-SLSWKTVQGLSLQELVLSGNPLH  116 (156)
T ss_dssp             CS-CCCSTTTCSCCCCEEECCSSCCC
T ss_pred             Cc-ccChhhhccccccccccCCCccc
Confidence            87 44444334446888888888764


No 96 
>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.08  E-value=5.7e-11  Score=122.48  Aligned_cols=103  Identities=28%  Similarity=0.399  Sum_probs=79.5

Q ss_pred             cCccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcChhcHHHHHHHHHHHHhCCCCCccceEE-EEEECCEEEEEEcc
Q 004275          659 NNFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKSKQGNREFVNEIGMISALQHQNLVKLYG-CCIEGNQLLLVYEY  736 (764)
Q Consensus       659 ~~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g-~~~~~~~~~lv~Ey  736 (764)
                      +.|+..+.||+|+||.||+|+. .+|+.||||.+.....  .+++.+|++++++++|+|+|..++ +....+..++||||
T Consensus         7 ~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme~   84 (299)
T d1ckia_           7 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMEL   84 (299)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCTT--SCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred             CEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhcc--CHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEEE
Confidence            3588899999999999999985 6789999999865432  235889999999998887665554 45667888999999


Q ss_pred             cCCCcHHHHHhcCC---------------CCCCCHHHHccccC
Q 004275          737 LENNSLARALFGNA---------------ITKITYTFSLHLWN  764 (764)
Q Consensus       737 ~~~GsL~~~L~~~~---------------~~~l~~~~~~~i~h  764 (764)
                      +. |++.+.+....               ..++.+.|+.+|+|
T Consensus        85 ~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH  126 (299)
T d1ckia_          85 LG-PSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIH  126 (299)
T ss_dssp             CC-CBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred             cC-CchhhhhhhccCCCcHHHHHHHHHHHHHHHHHHHHCCeee
Confidence            96 46666654322               13588999999988


No 97 
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.06  E-value=3.1e-10  Score=104.67  Aligned_cols=69  Identities=19%  Similarity=0.254  Sum_probs=27.7

Q ss_pred             CcCcCCCCCCCEEEeeCCc-CCCCCCccCCCCCCCcEEEccCccCCCCCcccccCCCCCcEEEccCccCC
Q 004275          150 PLEIGDISTLEELVLEDNQ-LVGPLPENLGNLKSLRRILLSSNNFTGSIPESYGNLKNLTEFRIDGSNLT  218 (764)
Q Consensus       150 p~~~~~l~~L~~L~Ls~N~-l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~  218 (764)
                      |..+..+++|++|++++|+ ++...+..|.++++|+.|+|++|+++...+.+|..+++|++|+|++|+++
T Consensus        24 p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~N~l~   93 (156)
T d2ifga3          24 LHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALE   93 (156)
T ss_dssp             TTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCS
T ss_pred             cccccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCcccccccccccccceeccCCCCc
Confidence            3333334444444443322 33222233444444444444444444333334444444444444444444


No 98 
>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=98.62  E-value=8.5e-09  Score=98.28  Aligned_cols=98  Identities=17%  Similarity=0.178  Sum_probs=71.7

Q ss_pred             ccCeeeccCCeeEEEEEEcCCCEEEEEEcCCcCh------------------hcHHHHHHHHHHHHhCCCCCccceEEEE
Q 004275          663 AANKIGEGGFGPVYKGTLSDGAVIAVKQLSSKSK------------------QGNREFVNEIGMISALQHQNLVKLYGCC  724 (764)
Q Consensus       663 ~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~------------------~~~~~f~~E~~~l~~l~H~niv~l~g~~  724 (764)
                      ..+.||+|+||+||+|+..+|+.||||.++....                  .....+.+|.+.+.+++|.++++.+++.
T Consensus         4 vg~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~~~   83 (191)
T d1zara2           4 IGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYAWE   83 (191)
T ss_dssp             EEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEEEE
T ss_pred             hCCEeeeCcceEEEEEECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEEec
Confidence            4678999999999999988899999998753210                  0113456788999999999999987653


Q ss_pred             EECCEEEEEEcccCCCcHHHHHh-------cCCCCCCCHHHHccccC
Q 004275          725 IEGNQLLLVYEYLENNSLARALF-------GNAITKITYTFSLHLWN  764 (764)
Q Consensus       725 ~~~~~~~lv~Ey~~~GsL~~~L~-------~~~~~~l~~~~~~~i~h  764 (764)
                        .  .+++|||++++.+.+.-.       .+...++.+.|+.+|+|
T Consensus        84 --~--~~lvme~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~giiH  126 (191)
T d1zara2          84 --G--NAVLMELIDAKELYRVRVENPDEVLDMILEEVAKFYHRGIVH  126 (191)
T ss_dssp             --T--TEEEEECCCCEEGGGCCCSCHHHHHHHHHHHHHHHHHTTEEC
T ss_pred             --C--CEEEEEeeccccccchhhHHHHHHHHHHHHHHHHHhhCCEEE
Confidence              2  379999999876543211       11124578999999998


No 99 
>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.47  E-value=7.2e-08  Score=101.43  Aligned_cols=104  Identities=14%  Similarity=0.180  Sum_probs=74.7

Q ss_pred             CccccCeeeccCCeeEEEEEE-cCCCEEEEEEcCCcChhcHHHHHHHHHHHHhCC-----------CCCccceEEEEEE-
Q 004275          660 NFDAANKIGEGGFGPVYKGTL-SDGAVIAVKQLSSKSKQGNREFVNEIGMISALQ-----------HQNLVKLYGCCIE-  726 (764)
Q Consensus       660 ~~~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~-----------H~niv~l~g~~~~-  726 (764)
                      .|+..+.||+|+||+||+|+. .+|+.||||+++... ...+.+.+|++++.+++           |+|||++++++.. 
T Consensus        14 rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~-~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~~   92 (362)
T d1q8ya_          14 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHK   92 (362)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEE
T ss_pred             cEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeccc-cchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeeec
Confidence            388899999999999999995 679999999997542 23457888998888775           5789999988865 


Q ss_pred             -CCEEEEEEcccCCCcHHHH-HhcCC----------------CCCCCHHHH-ccccC
Q 004275          727 -GNQLLLVYEYLENNSLARA-LFGNA----------------ITKITYTFS-LHLWN  764 (764)
Q Consensus       727 -~~~~~lv~Ey~~~GsL~~~-L~~~~----------------~~~l~~~~~-~~i~h  764 (764)
                       ....+++|+++..+..... .....                ..++.+.|. .+|+|
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~IvH  149 (362)
T d1q8ya_          93 GPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIH  149 (362)
T ss_dssp             ETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEEC
T ss_pred             cccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhcCccc
Confidence             3456677777655543222 22111                134667776 77888


No 100
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.11  E-value=5.2e-08  Score=89.96  Aligned_cols=69  Identities=19%  Similarity=0.143  Sum_probs=31.4

Q ss_pred             chhhhcCCCCcEEecccCcCccc--CCcCcCCCCCCCEEEeeCCcCCCCCCccCCCCCCCcEEEccCccCC
Q 004275          126 PKSFARLQNLTKLLILGNRLSGS--IPLEIGDISTLEELVLEDNQLVGPLPENLGNLKSLRRILLSSNNFT  194 (764)
Q Consensus       126 p~~~~~l~~L~~L~Ls~n~l~~~--~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~  194 (764)
                      +..+..+++|++|+|++|+++..  ++..+..+++|+.|+|++|.++...+-.+.+..+|+.|++++|.+.
T Consensus        58 ~~~~~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~~l~~l~~l~~~~L~~L~L~~Npl~  128 (162)
T d1koha1          58 RIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLS  128 (162)
T ss_dssp             HHHHHHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCCCGGGHHHHTTCCCSSCCCTTSTTS
T ss_pred             HHHHHhCCCCCEeeCCCccccCCchhHHHHhhCCcccccccccCccccchhhhhhhccccceeecCCCCcC
Confidence            33344556666666666665532  1222344555555555555554322111222234444445554444


No 101
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.02  E-value=1.2e-07  Score=87.39  Aligned_cols=65  Identities=29%  Similarity=0.303  Sum_probs=30.3

Q ss_pred             CCCCCCEEEccCCcCCcc--CchhhhcCCCCcEEecccCcCcccCCcCcCCCCCCCEEEeeCCcCCC
Q 004275          107 NLTFLQEVDLSRNYFNGS--LPKSFARLQNLTKLLILGNRLSGSIPLEIGDISTLEELVLEDNQLVG  171 (764)
Q Consensus       107 ~L~~L~~L~Ls~N~l~~~--~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~  171 (764)
                      .++.|++|+|++|+++..  ++..+..+++|+.|+|++|.++...+-.+.....|+.|++++|.+..
T Consensus        63 ~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~~l~~l~~l~~~~L~~L~L~~Npl~~  129 (162)
T d1koha1          63 NIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLSD  129 (162)
T ss_dssp             HCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCCCGGGHHHHTTCCCSSCCCTTSTTSS
T ss_pred             hCCCCCEeeCCCccccCCchhHHHHhhCCcccccccccCccccchhhhhhhccccceeecCCCCcCc
Confidence            445555555555555432  22334455555555555555543222122223345555555555543


No 102
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=97.24  E-value=6.2e-05  Score=68.95  Aligned_cols=87  Identities=18%  Similarity=0.131  Sum_probs=42.5

Q ss_pred             CCCCCCEEEccCC-cCCcc----CchhhhcCCCCcEEecccCcCcccCC----cCcCCCCCCCEEEeeCCcCCCC----C
Q 004275          107 NLTFLQEVDLSRN-YFNGS----LPKSFARLQNLTKLLILGNRLSGSIP----LEIGDISTLEELVLEDNQLVGP----L  173 (764)
Q Consensus       107 ~L~~L~~L~Ls~N-~l~~~----~p~~~~~l~~L~~L~Ls~n~l~~~~p----~~~~~l~~L~~L~Ls~N~l~~~----~  173 (764)
                      +.+.|++|+|+++ .++..    +-..+...+.|++|+|++|.+...-.    ..+...+.|++|+|++|.+...    +
T Consensus        13 n~~~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~~l   92 (167)
T d1pgva_          13 DDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARL   92 (167)
T ss_dssp             TCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHH
T ss_pred             CCCCCcEEEeCCCCCCCHHHHHHHHHHHhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcchHHHHHH
Confidence            3456666666653 34321    22234455566666666666542211    2233345566666666655421    1


Q ss_pred             CccCCCCCCCcEEEccCccC
Q 004275          174 PENLGNLKSLRRILLSSNNF  193 (764)
Q Consensus       174 p~~l~~l~~L~~L~Ls~N~l  193 (764)
                      -..+...++|++|++++|.+
T Consensus        93 ~~aL~~n~sL~~L~l~~n~~  112 (167)
T d1pgva_          93 LRSTLVTQSIVEFKADNQRQ  112 (167)
T ss_dssp             HHHTTTTCCCSEEECCCCSS
T ss_pred             HHHHHhCCcCCEEECCCCcC
Confidence            12244445566666655543


No 103
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=97.04  E-value=0.00016  Score=66.14  Aligned_cols=59  Identities=12%  Similarity=0.029  Sum_probs=27.7

Q ss_pred             CCCCcEEEccCccCCCc----CcccccCCCCCCEEeeeCCcCCCC-------CccchhcCCCCCEEEcCC
Q 004275          204 LKNLTEFRIDGSNLTGR----IPNFIGNWTKLDRLDLQGTSLEGP-------IPSTISQLKNLTELRISD  262 (764)
Q Consensus       204 l~~L~~L~L~~n~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~-------~p~~l~~l~~L~~L~L~~  262 (764)
                      .+.|++|++++|.++..    +-..+...+.|++|++++|++...       +...+..-++|+.|+++.
T Consensus        71 n~~L~~L~L~~n~i~~~g~~~l~~aL~~n~sL~~L~l~~n~~~~~g~~~~~~l~~~L~~n~sL~~l~l~~  140 (167)
T d1pgva_          71 SPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISF  140 (167)
T ss_dssp             CSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCC
T ss_pred             cccccceeeehhhcchHHHHHHHHHHHhCCcCCEEECCCCcCCCccHHHHHHHHHHHHhCCCccEeeCcC
Confidence            34455555555544421    112334445566666666554321       223344455666666544


No 104
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=96.18  E-value=0.00044  Score=62.86  Aligned_cols=64  Identities=22%  Similarity=0.227  Sum_probs=31.0

Q ss_pred             CCCCCCEEEccC-CcCCcc----CchhhhcCCCCcEEecccCcCcccC----CcCcCCCCCCCEEEeeCCcCC
Q 004275          107 NLTFLQEVDLSR-NYFNGS----LPKSFARLQNLTKLLILGNRLSGSI----PLEIGDISTLEELVLEDNQLV  170 (764)
Q Consensus       107 ~L~~L~~L~Ls~-N~l~~~----~p~~~~~l~~L~~L~Ls~n~l~~~~----p~~~~~l~~L~~L~Ls~N~l~  170 (764)
                      +.+.|++|+|++ +.++..    +-..+...++|++|+|++|.++...    -..+...+.|+.+++++|.+.
T Consensus        15 ~~~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~   87 (166)
T d1io0a_          15 NDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFIS   87 (166)
T ss_dssp             TCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCC
T ss_pred             cCCCCcEEEcCCCCCCCHHHHHHHHHHHhcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhcccccc
Confidence            445666666665 334321    1223344556666666666554221    112333455555555555543


No 105
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=95.93  E-value=0.00036  Score=63.48  Aligned_cols=66  Identities=11%  Similarity=0.111  Sum_probs=34.3

Q ss_pred             hhcCCCCcEEeccc-CcCccc----CCcCcCCCCCCCEEEeeCCcCCCCC----CccCCCCCCCcEEEccCccCC
Q 004275          129 FARLQNLTKLLILG-NRLSGS----IPLEIGDISTLEELVLEDNQLVGPL----PENLGNLKSLRRILLSSNNFT  194 (764)
Q Consensus       129 ~~~l~~L~~L~Ls~-n~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~----p~~l~~l~~L~~L~Ls~N~l~  194 (764)
                      ..+.++|++|+|++ +.++..    +-..+...++|++|+|++|.+....    -..+...++++.+++++|.++
T Consensus        13 ~~~~~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~   87 (166)
T d1io0a_          13 QNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFIS   87 (166)
T ss_dssp             HTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCC
T ss_pred             HhcCCCCcEEEcCCCCCCCHHHHHHHHHHHhcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhcccccc
Confidence            34556777777776 344321    2223445666666666666654321    112333455666666655554


No 106
>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}
Probab=91.67  E-value=0.23  Score=47.19  Aligned_cols=92  Identities=13%  Similarity=0.063  Sum_probs=61.9

Q ss_pred             HHHHhhcCccccCeeeccCCeeEEEEEEcCCCEEEEEEcCCcChhcHHHHHHHHHHHHhCC-CCCccceEEEEEECCEEE
Q 004275          653 QIKAATNNFDAANKIGEGGFGPVYKGTLSDGAVIAVKQLSSKSKQGNREFVNEIGMISALQ-HQNLVKLYGCCIEGNQLL  731 (764)
Q Consensus       653 ~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~  731 (764)
                      ++....+.+......+-++...||+... +++.+.||+...........+.+|...+..++ |--+-++++++...+..+
T Consensus         8 ~l~~~~~~~~~~~~~~G~s~~~v~rv~~-~~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~   86 (263)
T d1j7la_           8 ELKKLIEKYRCVKDTEGMSPAKVYKLVG-ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSN   86 (263)
T ss_dssp             HHHHHHTTSEEEECSCCCSSSEEEEEEC-SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEE
T ss_pred             HHHHhhhceEEEEcCCCCCCCcEEEEEe-CCCeEEEEEcCCCcccchhhHHHHHHHHHHHhccCCCCcEEEEEecCCceE
Confidence            3444444555444433344568998875 45667888876544334445778888877664 434667888888888999


Q ss_pred             EEEcccCCCcHHHH
Q 004275          732 LVYEYLENNSLARA  745 (764)
Q Consensus       732 lv~Ey~~~GsL~~~  745 (764)
                      +||||+++..+.+.
T Consensus        87 lv~~~l~G~~~~~~  100 (263)
T d1j7la_          87 LLMSEADGVLCSEE  100 (263)
T ss_dssp             EEEECCSSEEHHHH
T ss_pred             EEEEeccccccccc
Confidence            99999999887544


No 107
>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}
Probab=77.80  E-value=1.9  Score=40.05  Aligned_cols=74  Identities=18%  Similarity=0.126  Sum_probs=52.2

Q ss_pred             eeeccC-CeeEEEEEEcCCCEEEEEEcCCcChhcHHHHHHHHHHHHhCC--CCCccceEEEEEECCEEEEEEcccCCCcH
Q 004275          666 KIGEGG-FGPVYKGTLSDGAVIAVKQLSSKSKQGNREFVNEIGMISALQ--HQNLVKLYGCCIEGNQLLLVYEYLENNSL  742 (764)
Q Consensus       666 ~iG~G~-~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~--H~niv~l~g~~~~~~~~~lv~Ey~~~GsL  742 (764)
                      .+..|. -+.||+...+++..+.+|.-.....   ..+.+|.+.+..+.  .--+.++++++.+.+..++||||+++-++
T Consensus        17 ~~~~G~s~~~v~r~~~~~~~~~vlK~~~~~~~---~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~G~~~   93 (255)
T d1nd4a_          17 QQTIGCSDAAVFRLSAQGRPVLFVKTDLSGAL---NELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDL   93 (255)
T ss_dssp             ECSCTTSSCEEEEEECTTSCCEEEEEECSCTT---SCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEET
T ss_pred             EcCCcccCCeEEEEEeCCCCEEEEEeCCccCH---hHHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEeeecccc
Confidence            344454 3678999888888888898655432   24667777776553  33356778888888889999999987665


No 108
>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}
Probab=50.37  E-value=12  Score=37.24  Aligned_cols=76  Identities=14%  Similarity=0.152  Sum_probs=47.4

Q ss_pred             CeeeccCCeeEEEEEEc-CCCEEEEEEcCCc----C---hhcHHHHHHHHHHHHhCC-C--CCccceEEEEEECCEEEEE
Q 004275          665 NKIGEGGFGPVYKGTLS-DGAVIAVKQLSSK----S---KQGNREFVNEIGMISALQ-H--QNLVKLYGCCIEGNQLLLV  733 (764)
Q Consensus       665 ~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~----~---~~~~~~f~~E~~~l~~l~-H--~niv~l~g~~~~~~~~~lv  733 (764)
                      +.||.|....||+.... +++.|.||.-...    .   .........|.+.+..+. +  ..+.+++++  +.+..++|
T Consensus        32 ~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--d~~~~~lv  109 (392)
T d2pula1          32 QEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVTV  109 (392)
T ss_dssp             EECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEEE
T ss_pred             EEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEEE--cCCCCEEE
Confidence            46899999999999854 4678899975321    1   112233456777776552 2  334555544  45666899


Q ss_pred             EcccCCCcH
Q 004275          734 YEYLENNSL  742 (764)
Q Consensus       734 ~Ey~~~GsL  742 (764)
                      |||+++..+
T Consensus       110 mE~L~~~~~  118 (392)
T d2pula1         110 MEDLSHLKI  118 (392)
T ss_dssp             ECCCTTSEE
T ss_pred             EeccCCccc
Confidence            999987553


No 109
>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}
Probab=33.63  E-value=10  Score=36.50  Aligned_cols=68  Identities=13%  Similarity=0.099  Sum_probs=44.7

Q ss_pred             eeEEEEEEcCCCEEEEEEcCCcChhcHHHHHHHHHHHHhCCCCCc-----cceE--EEEEECCEEEEEEcccCCCc
Q 004275          673 GPVYKGTLSDGAVIAVKQLSSKSKQGNREFVNEIGMISALQHQNL-----VKLY--GCCIEGNQLLLVYEYLENNS  741 (764)
Q Consensus       673 g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~ni-----v~l~--g~~~~~~~~~lv~Ey~~~Gs  741 (764)
                      -.||+.+.++|+.+++|..+.... ..+++..|.+.+..+....+     +..-  ......+..+.+++|++|..
T Consensus        36 N~vy~v~~~dg~~~VlK~~rp~~~-s~~~i~~E~~~l~~L~~~gipv~~p~~~~g~~~~~~~~~~~~l~~~~~G~~  110 (325)
T d1zyla1          36 NRVYQFQDEDRRRFVVKFYRPERW-TADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGGRQ  110 (325)
T ss_dssp             SEEEEECCTTCCCEEEEEECTTTS-CHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCCEE
T ss_pred             ceeEEEEcCCCCEEEEEEeCCCCC-CHHHHHHHHHHHHHHHhcCCCCCCceecCCCeeeeeeeEEEEEEeecCCcC
Confidence            379999999999999999875422 34567778877776542222     1111  12234567789999998644


Done!