Query 004278
Match_columns 764
No_of_seqs 482 out of 3162
Neff 8.0
Searched_HMMs 29240
Date Mon Mar 25 20:04:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004278.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004278hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3i6s_A Subtilisin-like proteas 100.0 3E-127 1E-131 1114.9 47.7 623 110-761 1-645 (649)
2 3vta_A Cucumisin; subtilisin-l 100.0 4E-115 1E-119 1016.8 49.0 603 110-761 1-620 (621)
3 1xf1_A C5A peptidase, SCP; hyd 100.0 4.1E-82 1.4E-86 766.8 41.4 530 123-761 7-606 (926)
4 3afg_A Subtilisin-like serine 100.0 6E-61 2E-65 549.3 38.1 368 33-610 33-419 (539)
5 2z2z_A TK-subtilisin precursor 100.0 1.9E-58 6.4E-63 512.1 20.3 343 35-609 2-392 (395)
6 3t41_A Epidermin leader peptid 100.0 7.2E-57 2.5E-61 511.8 25.4 358 34-610 43-466 (471)
7 2p4e_P Proprotein convertase s 100.0 9.1E-59 3.1E-63 533.6 4.2 332 35-575 75-422 (692)
8 1r6v_A Subtilisin-like serine 100.0 2.1E-54 7.2E-59 500.8 23.1 375 32-620 28-450 (671)
9 1y9z_A Alkaline serine proteas 100.0 2.9E-54 9.9E-59 485.3 22.8 384 123-630 14-437 (441)
10 1dbi_A AK.1 serine protease; h 100.0 3.5E-51 1.2E-55 432.6 24.7 266 116-608 12-279 (280)
11 1gci_A Subtilisin; hydrolase, 100.0 1.9E-51 6.4E-56 431.9 20.7 262 117-608 6-269 (269)
12 1r0r_E Subtilisin carlsberg; h 100.0 1.7E-51 5.7E-56 433.9 19.2 263 117-608 6-274 (274)
13 4h6x_A Thiazoline oxidase/subt 100.0 5.9E-53 2E-57 461.6 7.2 308 123-608 21-337 (357)
14 1to2_E Subtilisin BPN'; serine 100.0 1.1E-50 3.8E-55 429.0 21.9 265 117-609 6-276 (281)
15 1thm_A Thermitase; hydrolase(s 100.0 6E-50 2.1E-54 423.1 24.8 258 123-608 21-278 (279)
16 2x8j_A Intracellular subtilisi 100.0 5.8E-51 2E-55 440.2 16.8 271 116-608 22-310 (327)
17 3zxy_A Subtilisin-like protein 100.0 7.9E-51 2.7E-55 431.1 15.6 266 129-608 3-274 (282)
18 2ixt_A 36KDA protease; serine 100.0 2.3E-49 7.8E-54 425.8 25.7 287 117-603 8-309 (310)
19 2z30_A TK-subtilisin; thermoco 100.0 6.6E-50 2.3E-54 431.3 16.0 271 116-608 9-316 (320)
20 4h6w_A N-terminal cyanobactin 100.0 7.7E-50 2.6E-54 428.8 14.5 272 123-608 11-287 (306)
21 3lpc_A APRB2; protease, subtil 100.0 7.3E-49 2.5E-53 427.4 17.4 300 122-610 21-338 (340)
22 2iy9_A SUBA; toxin, shiga, pla 100.0 6.5E-49 2.2E-53 428.8 16.2 270 123-609 33-329 (347)
23 3lxu_X Tripeptidyl-peptidase 2 100.0 1.5E-47 5E-52 460.7 25.8 359 216-761 267-653 (1354)
24 1sh7_A Extracellular subtilisi 100.0 2.7E-47 9.4E-52 403.2 22.8 236 123-576 19-257 (284)
25 1wmd_A Protease; alpha-beta hy 100.0 1.5E-47 5.1E-52 430.2 20.7 291 123-610 11-319 (434)
26 4dzt_A Aqualysin-1, aqualysin- 100.0 7E-47 2.4E-51 399.5 20.2 236 123-576 21-259 (276)
27 2b6n_A Proteinase K; S binding 100.0 2.3E-46 7.8E-51 395.5 23.7 236 124-575 22-260 (278)
28 2pwa_A Proteinase K; structure 100.0 6.8E-47 2.3E-51 399.1 18.7 227 126-575 25-259 (279)
29 2oxa_A Extracellular serine pr 100.0 4.9E-47 1.7E-51 442.1 18.7 299 123-614 60-430 (600)
30 1p8j_A Furin precursor; prohor 100.0 1E-45 3.5E-50 418.9 23.3 295 123-612 28-333 (471)
31 2qtw_B Proprotein convertase s 100.0 1.7E-45 5.7E-50 413.3 19.6 279 125-608 18-313 (546)
32 2id4_A Kexin; KEX2, kexin, fur 100.0 2.5E-45 8.7E-50 418.4 18.1 286 123-611 44-344 (503)
33 3f7m_A Alkaline serine proteas 100.0 5.2E-45 1.8E-49 385.8 18.2 229 125-576 25-261 (279)
34 3hjr_A Extracellular serine pr 100.0 1.1E-42 3.6E-47 406.9 26.6 319 123-611 60-427 (600)
35 1t1e_A Kumamolisin; proenzyme, 99.9 8.2E-26 2.8E-30 258.3 6.9 96 247-350 274-383 (552)
36 1ga6_A Serine-carboxyl protein 99.9 3.7E-22 1.3E-26 217.5 10.5 102 249-351 91-207 (372)
37 3edy_A Tripeptidyl-peptidase 1 99.1 1.7E-10 5.8E-15 130.9 8.6 100 249-350 263-374 (544)
38 2w2n_P Proprotein convertase s 99.0 9.1E-11 3.1E-15 105.4 3.4 77 32-108 34-113 (114)
39 3cnq_P Subtilisin BPN'; unclea 98.9 1.4E-09 4.8E-14 91.4 7.2 74 32-112 5-79 (80)
40 2qtw_A Proprotein convertase s 98.8 3.5E-09 1.2E-13 96.2 4.2 76 33-108 45-123 (124)
41 1v5i_B POIA1, IA-1=serine prot 98.6 4.6E-08 1.6E-12 81.0 5.5 70 36-108 3-75 (76)
42 3icu_A E3 ubiquitin-protein li 97.6 0.00013 4.3E-09 71.1 9.0 78 394-471 82-186 (194)
43 2z30_B TK-subtilisin; thermoco 97.6 8E-05 2.7E-09 59.3 5.5 61 36-107 2-63 (65)
44 2ys4_A Hydrocephalus-inducing 95.6 0.036 1.2E-06 49.8 8.3 63 652-728 30-92 (122)
45 2ek8_A Aminopeptidase; metallo 92.9 0.12 4.3E-06 56.7 6.7 40 405-444 110-149 (421)
46 3fed_A Glutamate carboxypeptid 90.7 0.16 5.4E-06 59.3 4.4 39 405-443 150-188 (707)
47 3kas_A Transferrin receptor pr 90.2 0.19 6.3E-06 58.1 4.4 39 406-444 128-166 (640)
48 3lxu_X Tripeptidyl-peptidase 2 85.8 0.35 1.2E-05 59.6 3.2 24 129-152 32-55 (1354)
49 2e6j_A Hydin protein; PAPD, st 85.4 0.36 1.2E-05 42.1 2.3 57 671-728 26-82 (112)
50 1y9z_A Alkaline serine proteas 84.6 0.62 2.1E-05 51.4 4.3 32 478-517 181-212 (441)
51 3qbt_B Inositol polyphosphate 84.0 4.3 0.00015 37.0 9.0 90 671-762 43-139 (140)
52 2r39_A FIXG-related protein; s 79.6 7.3 0.00025 34.2 8.6 54 672-728 32-85 (118)
53 3iib_A Peptidase M28; YP_92679 76.9 2 7E-05 47.2 5.0 59 379-444 105-176 (444)
54 2qsv_A Uncharacterized protein 74.7 8.4 0.00029 37.8 8.4 53 671-728 19-71 (220)
55 3idu_A Uncharacterized protein 63.7 24 0.00082 31.4 8.0 50 671-725 33-83 (127)
56 3qis_A Inositol polyphosphate 61.5 16 0.00056 38.8 7.8 89 671-761 46-141 (366)
57 1z9l_A Vesicle-associated memb 51.5 54 0.0019 28.9 8.3 52 672-727 28-79 (128)
58 3abz_A Beta-glucosidase I; gly 48.9 1.2E+02 0.004 36.0 12.9 166 531-725 618-795 (845)
59 3zyz_A Beta-D-glucoside glucoh 48.6 51 0.0017 38.3 9.6 55 671-727 613-674 (713)
60 1row_A SSP-19, MSP-domain prot 47.8 60 0.002 27.9 7.7 49 675-727 19-67 (109)
61 1m1s_A WR4; structural genomic 45.2 52 0.0018 28.7 6.8 50 674-727 26-75 (116)
62 2qsv_A Uncharacterized protein 45.0 60 0.002 31.5 8.3 54 671-728 134-187 (220)
63 2x41_A Beta-glucosidase; hydro 44.4 53 0.0018 38.2 9.0 78 650-728 594-678 (721)
64 1msp_A MSP, major sperm protei 44.3 59 0.002 28.7 7.3 51 673-727 27-77 (126)
65 1wic_A Hypothetical protein ri 43.3 52 0.0018 30.1 7.0 52 672-727 36-87 (152)
66 1w8o_A Bacterial sialidase; 3D 40.0 1.5E+02 0.0052 33.2 11.9 64 655-728 363-427 (601)
67 2cri_A Vesicle-associated memb 37.5 80 0.0027 28.6 7.3 52 672-727 32-83 (147)
68 2kq1_A BH0266 protein; solutio 33.3 9.8 0.00034 33.4 0.3 51 676-727 58-110 (119)
69 3isy_A Bsupi, intracellular pr 32.1 2E+02 0.007 25.0 8.6 53 671-725 18-87 (120)
70 3sd2_A Putative member of DUF3 31.4 2.2E+02 0.0075 24.0 8.2 65 658-744 35-99 (101)
71 1wgl_A TOLL-interacting protei 30.3 33 0.0011 26.1 2.7 37 539-575 3-39 (59)
72 2l0d_A Cell surface protein; s 24.8 2.5E+02 0.0085 24.2 7.8 24 671-694 19-43 (114)
73 1yew_A Particulate methane mon 23.4 71 0.0024 33.4 4.6 52 671-726 264-336 (382)
74 3q48_A Chaperone CUPB2; IG fol 21.3 3E+02 0.01 27.3 8.8 54 672-726 43-103 (257)
75 1ni7_A ER75, hypothetical prot 21.3 60 0.002 29.9 3.2 31 535-566 79-109 (155)
No 1
>3i6s_A Subtilisin-like protease; PA-domain, FN3-domain, hydrolase; HET: NAG FUC; 2.50A {Solanum lycopersicum} PDB: 3i74_A*
Probab=100.00 E-value=3.2e-127 Score=1114.92 Aligned_cols=623 Identities=44% Similarity=0.744 Sum_probs=559.1
Q ss_pred cCCCCcccCCcccCCCccCCCCCCCcEEEEEecCCCCCCCCccCCCCCCCCCcceeeeecccccCcccCCceeeeeeecc
Q 004278 110 TTRSPQFLGLRNQQGLWSESDYGSDVIIGVFDTGIWPERRSFSDLNIGSIPSKWKGVCQVGVKFTAKNCNKKIIGARFFS 189 (764)
Q Consensus 110 ~~~s~~~~g~~~~~~~~~~~~~G~gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~ 189 (764)
|+++|+|+||++..++|..+.+|+||+|||||||||++||+|.+.+++|+|.+|+|.|+.|.+|+...||+|++++++|.
T Consensus 1 Tt~s~~flgl~~~~~~w~~~~~G~gViVaViDTGId~~Hp~f~d~g~~p~p~~wkg~c~~g~~f~~~~cN~kiig~~~f~ 80 (649)
T 3i6s_A 1 TTHTSDFLKLNPSSGLWPASGLGQDVIVAVLDSGIWPESASFQDDGMPEIPKRWKGICKPGTQFNASMCNRKLIGANYFN 80 (649)
T ss_dssp CCSHHHHTTCCSSSSHHHHHGGGTTCEEEEEESCBCTTSGGGCCTTCCCCCTTCCCCBCCBTTBCTTSCCSSEEEEEECC
T ss_pred CCCChHHcCCCCchhhHhccCCCCCCEEEEEccCCCCCChhhccCCCCCCccccccccccCccccccccccceeeeEecc
Confidence 57899999999777899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCCCCccccCCCCCCCCChhhhHHHhcccCCCCCCccccccceeeeecCCCcEEEEEeecCCCCCC
Q 004278 190 KGHEAAGGSAGPIGGGINETVEFMSPRDADGHGTHTASTAAGRHAFRASMEGYAAGVAKGVAPKARLAVYKVCWKNAGCF 269 (764)
Q Consensus 190 ~g~~~~~~~~~~~~~~~~~~~~~~~~~D~~gHGThVAgi~AG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g~~ 269 (764)
+++..... + ...+..+++|..||||||||||||+.+++.+++|++.|++.||||+|+|++||+|+.. +|.
T Consensus 81 ~~~~~~~~--~-------~~~~~~~~~D~~GHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~-g~~ 150 (649)
T 3i6s_A 81 KGILANDP--T-------VNITMNSARDTDGHGTHCASITAGNFAKGVSHFGYAPGTARGVAPRARLAVYKFSFNE-GTF 150 (649)
T ss_dssp HHHHHHCT--T-------CCCTTCSSBCSSSHHHHHHHHHHCCCEEEEEETTEEEEEECCSSTTCEEEEEECEETT-EEC
T ss_pred Cccccccc--c-------cccCCCCCCCCCCcHHHHHHHHhCCCCcCccccccccCceeEECCCCEEEEEeccCCC-CCC
Confidence 87654321 1 1334567899999999999999999999999999999999999999999999999988 799
Q ss_pred HHHHHHHHHHHHhCCCcEEEeccCCCCCCCCCCCCCHHHHHHHHhhcCCcEEEEecCCCCCCCCccccCCCceEEecCCc
Q 004278 270 DSDILAAFDAAVNDGVDVISISIGGGDGISSPYYLDPIAIGSYGAASRGVFVSSSAGNDGPNGMSVTNLAPWIVTVGAGT 349 (764)
Q Consensus 270 ~s~i~~ai~~A~~~gvdVIn~SlG~~~g~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~~p~vitVgAst 349 (764)
.+++++||+||+++|+||||||||.. ..++..+++++++++|.++||+||+||||+|+...++++.+||+|+|||++
T Consensus 151 ~~~i~~Ai~~A~~~gvdVIn~SlG~~---~~~~~~~~i~~a~~~A~~~Gi~vV~AAGN~G~~~~t~~~~ap~vitVgAst 227 (649)
T 3i6s_A 151 TSDLIAAMDQAVADGVDMISISYGYR---FIPLYEDAISIASFGAMMKGVLVSASAGNRGPGIGSLNNGSPWILCVASGH 227 (649)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECCCCC---SCCGGGCHHHHHHHHHHHTTCEEEEECCSCTTSTTCCSCCCTTSEEEEEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEeCCccC---CcccchhHHHHHHHHHHhCCcEEEEeCCCCCCCCCccCCCCCceEEEeeee
Confidence 99999999999999999999999997 567788999999999999999999999999999999999999999999999
Q ss_pred cCCccceEEEeCCCeEEEeEEeecCCCCCCceeeEEecCCCCccccccccCCCCCCCcc--ceeEEEEecCCCchhhHHH
Q 004278 350 IDRNFPAEVRLGDGRRLSGVSLYAGAPLSEKMYPLIYPGKSGVLSASLCMENSLDPNLV--RGKIVICDRGSSPRVAKGL 427 (764)
Q Consensus 350 ~d~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~plv~~~~~~~~~~~~C~~~~~~~~~~--~gkivl~~~g~~~~~~~~~ 427 (764)
+||.|+..+.+++++++.|.++|..... ...+|++|.. ....|.+..+++.++ +|||++|+|+.+.+.+|..
T Consensus 228 ~dr~f~~~~~lgng~~~~g~sl~~~~~~-~~~~plv~~~-----~~~~C~~~~l~~~~vdl~GkIvlc~~g~~~~~~k~~ 301 (649)
T 3i6s_A 228 TDRTFAGTLTLGNGLKIRGWSLFPARAF-VRDSPVIYNK-----TLSDCSSEELLSQVENPENTIVICDDNGDFSDQMRI 301 (649)
T ss_dssp CSCEEEEEEEETTSCEEEEECCCSSCBC-EEEEEEECCT-----TTTTCCCHHHHTTSSSGGGCEEEECCCSCHHHHHHH
T ss_pred cccceeeEEEeCCCcEEeeeecccCccc-CcceeeEecc-----cccccccccccccccccCCcEEEEeCCCccHHHHHH
Confidence 9999999999999999999999887644 6789999966 357899888888877 9999999999999999999
Q ss_pred HHHHcCceEEEEeccCCCCC----c-----cc---HHHHHHHHHcCCCCeEEEEecceeecccCCCeeecccCCCCCCCC
Q 004278 428 VVKKAGGVGMILANGISNGE----G-----LV---GDAVKAYISSTANPTATIDFKGTILGIKPAPVVASFSARGPNGLN 495 (764)
Q Consensus 428 ~~~~~Ga~g~i~~n~~~~~~----~-----~~---~~~~~~y~~~~~~~~~~i~~~~t~~~~~~~~~~a~fSS~Gp~~~~ 495 (764)
+++++|+.|+|++|+..... . +. ...|.+|++++.+++++|.+..+..+..+++.++.||||||+...
T Consensus 302 ~~~~~Ga~g~i~~n~~~~~~~~~~~~P~~~v~~~~g~~i~~yi~s~~~~~a~i~~~~t~~~~~~~~~va~FSSrGP~~~~ 381 (649)
T 3i6s_A 302 ITRARLKAAIFISEDPGVFRSATFPNPGVVVNKKEGKQVINYVKNSVTPTATITFQETYLDTKPAPVVAASSARGPSRSY 381 (649)
T ss_dssp HHHHTCSEEEEECCCGGGGGCCCCCSCEEEECHHHHHHHHHHHHTCSSCEEEEEEEEEECCCSSCCEECTTSCCSSCTTC
T ss_pred HHHhcCceEEEEecCccccccccCcCCEEEEcHHHHHHHHHHHhcCCCceEEEeecceeeccCCCCcccccCCCCCCCCC
Confidence 99999999999999862100 0 00 118999999999999999999999998999999999999999988
Q ss_pred CCCCCCcEEcCCCcEEecccCCCCCCCCCCCC-ccceeEEeccccchhhhHHHHHHHHhhhCCCCCHHHHHHHHHhcccc
Q 004278 496 PEILKPDLIAPGVNILAAWTEAVGPTGLDSDL-RKTEFNILSGTSMACPHVSGAAALLKSAHPDWSPAAIRSAMMTTASI 574 (764)
Q Consensus 496 ~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~-~~~~y~~~sGTSmAaP~VAGvaALl~~~~P~~sp~~ik~~L~~TA~~ 574 (764)
+++|||||+|||++|+++|+....+.....+. +...|..+||||||||||||+||||||+||+|||++||++||+||++
T Consensus 382 ~~ilKPDI~APG~~Ilsa~~~~~~~~~~~~d~~~~~~y~~~SGTSMAaPhVAGvaALlks~~P~~Spa~IksaLmtTA~~ 461 (649)
T 3i6s_A 382 LGISKPDILAPGVLILAAYPPNVFATSIGTNILLSTDYILESGTSMAAPHAAGIAAMLKAAHPEWSPSAIRSAMMTTADP 461 (649)
T ss_dssp TTSCSCCEEEECSSEEEECCTTSCCEEETTTEEECCSEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTCBC
T ss_pred CCccCCeEEeCCCCeEeecCCCCCccccccccccccceecccccccccHHHHHHHHHHHHhCCCCCHHHHHHHHhccccc
Confidence 99999999999999999999865443333332 33589999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCccCCCCCCCCCCCCCCcccccccCCCCceecCCchhhhhhhccCCCCccceeEeeccccc--CCCCCCCCC
Q 004278 575 VDNSNQPMTDEATGNASTPYDFGAGHVNLDRAMDPGLVYDITNDDYVNFLCANGYGPKLIQVITRIPAR--CPAKRPRPE 652 (764)
Q Consensus 575 ~~~~~~~~~~~~~~~~~~~~~~G~G~vn~~~Al~~glv~d~~~~dy~~~lc~~~~~~~~~~~~~~~~~~--c~~~~~~~~ 652 (764)
+++.+.++.++..+.++++++||+|+||+.+|++||||||++.+||++|||++||+.++|+.|++..+. |+. .+.
T Consensus 462 ~~~~g~~i~~~~~~~~a~~~~~GaG~vn~~~A~~pGLvyd~~~~dy~~flc~~~y~~~~i~~~~~~~~~~~C~~---~~~ 538 (649)
T 3i6s_A 462 LDNTRKPIKDSDNNKAATPLDMGAGHVDPNRALDPGLVYDATPQDYVNLLCSLNFTEEQFKTIARSSASHNCSN---PSA 538 (649)
T ss_dssp BCTTSSBCEETTTSSBCCHHHHTTCBCCHHHHTCCSEECCCCHHHHHHHHHTTCCCHHHHHHHHTTTSCC-CCC---CCC
T ss_pred ccCCCCcccccccCCcCCcCCCCeeeeCHHHhcCccccccCCchhHHHhhhcCCCCcccceeeecCCCcCCCCC---chh
Confidence 999999998876778899999999999999999999999999999999999999999999999998777 985 567
Q ss_pred CCCCCceeeee-ccCcCccee--EEEEEEEEecCCCCeEEEEEEEcCCCCeEEEEecCeeEeccCceEEEEEEEEEeccc
Q 004278 653 NLNYPSIAALF-STQSRGVSS--KSFIRTVTNVGQPNAVYTVKVVSPEKGVTVTVKPSRLVFTEGVKKSSFVVTVTADSK 729 (764)
Q Consensus 653 ~lN~ps~~~~~-~~~~~~~~~--~~~~rtvtNvg~~~~ty~~~~~~p~~g~~v~v~p~~l~~~~~~~~~~~~vt~~~~~~ 729 (764)
|||||||++.+ ..... .. ++|+|||||||+..+||+++++.| +|++|+|+|++|+|++.+|+++|+|||+...
T Consensus 539 ~lNyPs~~~~~~~~~~~--~~~~~~~~Rtvtnvg~~~~~y~~~v~~p-~g~~v~v~P~~l~f~~~~~~~~f~v~~~~~~- 614 (649)
T 3i6s_A 539 DLNYPSFIALYSIEGNF--TLLEQKFKRTVTNVGKGAATYKAKLKAP-KNSTISVSPQILVFKNKNEKQSYTLTIRYIG- 614 (649)
T ss_dssp CCCCSSEEEEECCSSCC--CCEEEEEEEEEEECC--CEEEEEEEECC-TTEEEEEESSEEEECC-CCEEEEEEEEEECC-
T ss_pred hcCCCcEEeecccCCCC--ccceEEEEEEEEEeCCCCcEEEEEEecC-CCCEEEEECCEEEEecCCCEEEEEEEEEecc-
Confidence 99999999987 32110 12 899999999999999999999999 9999999999999988999999999999875
Q ss_pred ccccCCCccEEEEEEEEC--CccEEEEEEEEEec
Q 004278 730 NLVLNDSGAAFGSISWSD--GKHEVRSPLVVTQL 761 (764)
Q Consensus 730 ~~~~~~~~~~~G~~~~~~--~~~~v~~p~~v~~~ 761 (764)
.....| .||+|+|+| ++|.||+||+|+..
T Consensus 615 --~~~~~~-~fg~l~w~~~~~~h~vrsPi~v~~~ 645 (649)
T 3i6s_A 615 --DEGQSR-NVGSITWVEQNGNHSVRSPIVTSPI 645 (649)
T ss_dssp --C---CC-CEEEEEEEETTSCCEEEEEEEEEEC
T ss_pred --cCCCce-EEEEEEEEcCCCCeEEEEeEEEEEc
Confidence 344566 999999999 99999999999875
No 2
>3vta_A Cucumisin; subtilisin-like fold, serine protease, hydrolase; HET: DFP NAG FUC BMA MAN; 2.75A {Cucumis melo}
Probab=100.00 E-value=3.6e-115 Score=1016.79 Aligned_cols=603 Identities=43% Similarity=0.748 Sum_probs=504.1
Q ss_pred cCCCCcccCCcccCCCccCCCCCCCcEEEEEecCCCCCCCCccCCCCCCCCCcceeeeecccccCcccCCceeeeeeecc
Q 004278 110 TTRSPQFLGLRNQQGLWSESDYGSDVIIGVFDTGIWPERRSFSDLNIGSIPSKWKGVCQVGVKFTAKNCNKKIIGARFFS 189 (764)
Q Consensus 110 ~~~s~~~~g~~~~~~~~~~~~~G~gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~ 189 (764)
|+++|+|+||+. .+|.+..+|+||+|||||||||++||+|+++++.+++.+|+|.|+.+.+| .||+|++|+|+|.
T Consensus 1 tt~s~~flGl~~--~~~~~~~~G~gViVgViDTGId~~Hp~f~d~g~~~~~~~w~g~~~~~~~~---~~n~k~ig~~~~~ 75 (621)
T 3vta_A 1 TTRSWDFLGFPL--TVPRRSQVESNIVVGVLDTGIWPESPSFDDEGFSPPPPKWKGTCETSNNF---RCNRKIIGARSYH 75 (621)
T ss_dssp CCSHHHHTTCCT--TCCCCHHHHTTCEEEEEESCBCTTSGGGCCTTCCCCCTTCCCCBCCSSSC---CCCSSEEEEEECC
T ss_pred CCCChhHcCCCc--cccccCCCCCCCEEEEEecCCCCCChhhcCCCCCCcccccccccccCCCc---ccCcceeeeeecc
Confidence 689999999975 68999999999999999999999999999999999999999999998887 4999999999998
Q ss_pred ccccccCCCCCCCCCCCCCccccCCCCCCCCChhhhHHHhcccCCCCCCccccccceeeeecCCCcEEEEEeecCCCCCC
Q 004278 190 KGHEAAGGSAGPIGGGINETVEFMSPRDADGHGTHTASTAAGRHAFRASMEGYAAGVAKGVAPKARLAVYKVCWKNAGCF 269 (764)
Q Consensus 190 ~g~~~~~~~~~~~~~~~~~~~~~~~~~D~~gHGThVAgi~AG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g~~ 269 (764)
.+.... ..+..+++|.+||||||||||||+.+.+.+.+|++.|.++||||+|+|++||+|++. +|.
T Consensus 76 ~~~~~~-------------~~~~~~p~D~~GHGTHvAgi~AG~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~-g~~ 141 (621)
T 3vta_A 76 IGRPIS-------------PGDVNGPRDTNGHGTHTASTAAGGLVSQANLYGLGLGTARGGVPLARIAAYKVCWND-GCS 141 (621)
T ss_dssp CSSSCC-------------TTCCSSSBCSSSHHHHHHHHHHCCCEEEEEETTEEEEEECCSCTTSEEEEEECEETT-EEC
T ss_pred cCCccC-------------CCCCCCCCCCCcCHHHHHHHHhCcCCCCccccccccccEEEECCCCEEEEEEeecCC-CCC
Confidence 765433 234467899999999999999999999999999999999999999999999999998 899
Q ss_pred HHHHHHHHHHHHhCCCcEEEeccCCCCCCCCCCCCCHHHHHHHHhhcCCcEEEEecCCCCCCCCccccCCCceEEecCCc
Q 004278 270 DSDILAAFDAAVNDGVDVISISIGGGDGISSPYYLDPIAIGSYGAASRGVFVSSSAGNDGPNGMSVTNLAPWIVTVGAGT 349 (764)
Q Consensus 270 ~s~i~~ai~~A~~~gvdVIn~SlG~~~g~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~~p~vitVgAst 349 (764)
.+++++||++|+++|+||||||||+.. ...+..+++++++++|+++||+||+||||+|+...++++.+||+++|++++
T Consensus 142 ~~di~~a~~~a~~~g~dVin~SlG~~~--~~~~~~~~~~~~~~~a~~~Gi~vv~aAGN~g~~~~t~~~~a~~~~~v~ast 219 (621)
T 3vta_A 142 DTDILAAYDDAIADGVDIISLSVGGAN--PRHYFVDAIAIGSFHAVERGILTSNSAGNGGPNFFTTASLSPWLLSVAAST 219 (621)
T ss_dssp HHHHHHHHHHHHHHTCSEEEECCCCCC--GGGGGGCTHHHHHHHHHTTTCEEEEECCSCCSSTTCCCCCCTTSEEEEEEC
T ss_pred HHHHHHHHHHHHHhCCCEEEecCCCCC--CCCcCCcHHHHHHHHHHHCCCEEEEeCCCCCCCCcccCCCCCCceeEEEee
Confidence 999999999999999999999999874 345667899999999999999999999999999999999999999999999
Q ss_pred cCCccceEEEeCCCeEEEeEEeecCCCCCCceeeEEecCCCC-----ccccccccCCCCCCCccceeEEEEecCCCchhh
Q 004278 350 IDRNFPAEVRLGDGRRLSGVSLYAGAPLSEKMYPLIYPGKSG-----VLSASLCMENSLDPNLVRGKIVICDRGSSPRVA 424 (764)
Q Consensus 350 ~d~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~plv~~~~~~-----~~~~~~C~~~~~~~~~~~gkivl~~~g~~~~~~ 424 (764)
.+|.|...+.++++..+.+.+++... ...+++++..+.. ......|.+..+++.+++|||++|.++ +..
T Consensus 220 ~d~~~~~~~~~~~~~~~~~~s~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~gkivl~~~~---~~~ 293 (621)
T 3vta_A 220 MDRKFVTQVQIGNGQSFQGVSINTFD---NQYYPLVSGRDIPNTGFDKSTSRFCTDKSVNPNLLKGKIVVCEAS---FGP 293 (621)
T ss_dssp CSEEEEEEEEETTSCEEEEBCCCCSC---CEEECEEETTTSCCTTCCHHHHTTTCTTCSCGGGTTTSEEECSSC---CCH
T ss_pred ccccceeeEEeccCceeeeeecccCC---CcccccccccccccccccccccccccccccccccccceEEEEecC---CCh
Confidence 99999999999999999988876543 4567777766542 234567999999999999999999865 446
Q ss_pred HHHHHHHcCceEEEEeccCCCCCcc--------c---HHHHHHHHHcCCCCeEEEEecceeecccCCCeeecccCCCCCC
Q 004278 425 KGLVVKKAGGVGMILANGISNGEGL--------V---GDAVKAYISSTANPTATIDFKGTILGIKPAPVVASFSARGPNG 493 (764)
Q Consensus 425 ~~~~~~~~Ga~g~i~~n~~~~~~~~--------~---~~~~~~y~~~~~~~~~~i~~~~t~~~~~~~~~~a~fSS~Gp~~ 493 (764)
+..+.+..|+.++|++++....... . ...+..|+.....+.+.+....+.. ...++.++.||||||+.
T Consensus 294 ~~~~~~~~Ga~gvi~~~~~~~~~~~~~lP~~~v~~~~g~~i~~~~~~~~~~~a~~~~~~~~~-~~~~~~va~FSSrGP~~ 372 (621)
T 3vta_A 294 HEFFKSLDGAAGVLMTSNTRDYADSYPLPSSVLDPNDLLATLRYIYSIRSPGATIFKSTTIL-NASAPVVVSFSSRGPNR 372 (621)
T ss_dssp HHHHHHHTTCSEEEEECSCCSSCCCCSSSEEEECHHHHHHHHHHHHHHSSCCEEECCCEEEE-CTTCCCBCTTSCCCSCT
T ss_pred hHHhhhhcceeEEEEEecCCCcccccccceEEECHHHHHHHHHHHhccCCcceEEecceEec-cCCCCceeeecCCCCCC
Confidence 7778888999999998876543211 1 1188999999999888876554443 46788999999999998
Q ss_pred CCCCCCCCcEEcCCCcEEecccCCCCCCCCCCCCccceeEEeccccchhhhHHHHHHHHhhhCCCCCHHHHHHHHHhccc
Q 004278 494 LNPEILKPDLIAPGVNILAAWTEAVGPTGLDSDLRKTEFNILSGTSMACPHVSGAAALLKSAHPDWSPAAIRSAMMTTAS 573 (764)
Q Consensus 494 ~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAGvaALl~~~~P~~sp~~ik~~L~~TA~ 573 (764)
..+++|||||+|||++|+++|+....... ..+...|..+||||||||||||+||||||+||+|+|++||++||+||+
T Consensus 373 ~~~~ilKPDI~APG~~Ilsa~~~~~~~~~---~~~~~~y~~~SGTSMAaPhVAGvaALl~q~~P~~spa~IksaLmtTA~ 449 (621)
T 3vta_A 373 ATKDVIKPDISGPGVEILAAWPSVAPVGG---IRRNTLFNIISGTSMSCPHITGIATYVKTYNPTWSPAAIKSALMTTAS 449 (621)
T ss_dssp TCTTSCSCCEEEECSSEEEECCSSSCBTT---BCCCCSEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHTCB
T ss_pred CCCCeeccccccCCcceEeecCccccccC---cCCCCcceEecCccccchhhhhHHHHHHHHCCCCCHHHHHHHHHhcCC
Confidence 88899999999999999999987543222 223447999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCccCCCCCCCCCCCCCCcccccccCCCCceecCCchhhhhhhccCCCCccceeEeecccccCCCCCC-CCC
Q 004278 574 IVDNSNQPMTDEATGNASTPYDFGAGHVNLDRAMDPGLVYDITNDDYVNFLCANGYGPKLIQVITRIPARCPAKRP-RPE 652 (764)
Q Consensus 574 ~~~~~~~~~~~~~~~~~~~~~~~G~G~vn~~~Al~~glv~d~~~~dy~~~lc~~~~~~~~~~~~~~~~~~c~~~~~-~~~ 652 (764)
+++..+ .+..+|+||+|+||+.+|++||||||++.+||+.|||+++|+..+++.+++....|..... ...
T Consensus 450 ~~~~~~---------~~~~~~~~GaG~v~~~~A~~pGLvyd~~~~dy~~~lc~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 520 (621)
T 3vta_A 450 PMNARF---------NPQAEFAYGSGHVNPLKAVRPGLVYDANESDYVKFLCGQGYNTQAVRRITGDYSACTSGNTGRVW 520 (621)
T ss_dssp CCCTTT---------CTTTHHHHTTCBCCHHHHSCCSEECCCCGGGCC-----------------------------CGG
T ss_pred cccccC---------CCCCchhcCCCccCHHHhcCCCeEeecccchhhhhhcccCCCchhheeeeccccccCCCCcCccc
Confidence 886543 4567899999999999999999999999999999999999999999999998888876554 678
Q ss_pred CCCCCceeeeeccCcCcceeEEEEEEEEecCCCCeEEEEEEEcCCCCeEEEEecCeeEeccCceEEEEEEEEEecccccc
Q 004278 653 NLNYPSIAALFSTQSRGVSSKSFIRTVTNVGQPNAVYTVKVVSPEKGVTVTVKPSRLVFTEGVKKSSFVVTVTADSKNLV 732 (764)
Q Consensus 653 ~lN~ps~~~~~~~~~~~~~~~~~~rtvtNvg~~~~ty~~~~~~p~~g~~v~v~p~~l~~~~~~~~~~~~vt~~~~~~~~~ 732 (764)
+||||||++.+..... .+++|+|||||||+...||+++++.| +|++|+|+|++|+|++.+|+++|+|||+..
T Consensus 521 ~lN~pS~~v~~~~~~~--~~~t~~rtvtnvg~~~~ty~~~v~~p-~gv~v~V~P~~l~f~~~~~~~~~~vt~~~~----- 592 (621)
T 3vta_A 521 DLNYPSFGLSVSPSQT--FNQYFNRTLTSVAPQASTYRAMISAP-QGLTISVNPNVLSFNGLGDRKSFTLTVRGS----- 592 (621)
T ss_dssp GSCCSSEEEECCSSCC--EEEEEEEEEEECSSSCEEEEEEEECC-SSEEEEEESSEEEECSTTCEEEEEEEEEEC-----
T ss_pred ccccccEEEEccCCCc--eEEEEEEEEEccCCCCeEEEEEEECC-CCcEEEEecCEEEEcCCCcEEEEEEEEEec-----
Confidence 9999999997654443 78999999999999999999999999 999999999999999899999999999854
Q ss_pred cCCCccEEEEEEEECCccEEEEEEEEEec
Q 004278 733 LNDSGAAFGSISWSDGKHEVRSPLVVTQL 761 (764)
Q Consensus 733 ~~~~~~~~G~~~~~~~~~~v~~p~~v~~~ 761 (764)
..+.+ .||+|+|+|++|.||+||+|+..
T Consensus 593 ~~~~~-~~g~l~w~d~~h~Vr~Pi~v~~~ 620 (621)
T 3vta_A 593 IKGFV-VSASLVWSDGVHYVRSPITITSL 620 (621)
T ss_dssp CCSSE-EEEEEEEECSSCCCEEEEEEECC
T ss_pred CCCce-EEEEEEEEcCCEEEEeCEEEEEe
Confidence 33556 99999999999999999999864
No 3
>1xf1_A C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {Streptococcus pyogenes} PDB: 3eif_A*
Probab=100.00 E-value=4.1e-82 Score=766.83 Aligned_cols=530 Identities=23% Similarity=0.304 Sum_probs=415.3
Q ss_pred CCCccCCCCCCCcEEEEEecCCCCCCCCccCCCCCCCCCcceeeeeccccc----------CcccCCceeeeeeeccccc
Q 004278 123 QGLWSESDYGSDVIIGVFDTGIWPERRSFSDLNIGSIPSKWKGVCQVGVKF----------TAKNCNKKIIGARFFSKGH 192 (764)
Q Consensus 123 ~~~~~~~~~G~gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~f----------~~~~~n~kiig~~~~~~g~ 192 (764)
..+|..+.+|+||+|||||||||++||+|.+ +..|++.|..+..| ...+||+||+++++|.++.
T Consensus 7 ~~~w~~~~~G~GV~VaVIDTGId~~Hp~f~~------~~~~~~~~~~~~~~~~~~~~~g~~~g~~~n~Kii~~~~~~~~~ 80 (926)
T 1xf1_A 7 KTLQEKAGKGAGTVVAVIDAGFDKNHEAWRL------TDKTKARYQSKEDLEKAKKEHGITYGEWVNDKVAYYHDYSKDG 80 (926)
T ss_dssp HHHHHHHCSCTTCEEEEEESCCTTCCCCCSC------CSCCCSSCCHHHHHHHHHHTTTCCCCBCCSSSCCEEEESCCCS
T ss_pred HHHHhccCCCCCcEEEEEecCCCCCCHhHcC------CCCCcccccchhhhcccccccCcccccccCcccceeeccccCC
Confidence 4689999999999999999999999999984 35677777654433 2347999999999887621
Q ss_pred cccCCCCCCCCCCCCCccccCCCCCCCCChhhhHHHhcccCCCCCCccccccceeeeecCCCcEEEEEeecCCCC--CCH
Q 004278 193 EAAGGSAGPIGGGINETVEFMSPRDADGHGTHTASTAAGRHAFRASMEGYAAGVAKGVAPKARLAVYKVCWKNAG--CFD 270 (764)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~D~~gHGThVAgi~AG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g--~~~ 270 (764)
.+ .|..||||||||||||+.+.+.+. .+.+.||||+|+|++||+|++. + +..
T Consensus 81 --------------------~~-~D~~gHGThVAgiiAg~~~~~~~~----~~~~~GvAP~A~l~~~kv~~~~-g~~~~~ 134 (926)
T 1xf1_A 81 --------------------KT-AVDQEHGTHVSGILSGNAPSETKE----PYRLEGAMPEAQLLLMRVEIVN-GLADYA 134 (926)
T ss_dssp --------------------CC-CCSSTTTTHHHHSSCCCCCCCCSC----SCCTTTTCTTSEEEEEECCCCS-CHHHHH
T ss_pred --------------------CC-CCCCCcHHHHHHHHhCCCccCccc----CCceEEECCCCEEEEEEeecCC-CCCCcH
Confidence 12 288999999999999997654332 2346899999999999999976 4 556
Q ss_pred HHHHHHHHHHHhCCCcEEEeccCCCCCCCCCCCCCHHHHHHHHhhcCCcEEEEecCCCCCCC-------------Cc--c
Q 004278 271 SDILAAFDAAVNDGVDVISISIGGGDGISSPYYLDPIAIGSYGAASRGVFVSSSAGNDGPNG-------------MS--V 335 (764)
Q Consensus 271 s~i~~ai~~A~~~gvdVIn~SlG~~~g~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~-------------~~--~ 335 (764)
+++++||++|+++|+||||||||...+. .....+++..++++|.++||+||+||||+|+.. .+ .
T Consensus 135 ~~i~~Ai~~Ai~~gvdVIn~SlG~~~~~-~~~~~~~~~~ai~~A~~~GilvV~AAGN~G~~g~~~~~~~~~~p~~~tv~~ 213 (926)
T 1xf1_A 135 RNYAQAIRDAINLGAKVINMSFGNAALA-YANLPDETKKAFDYAKSKGVSIVTSAGNDSSFGGKTRLPLADHPDYGVVGT 213 (926)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCSSCCCT-TCCCCHHHHHHHHHHHHTTCEEEEECCSCCBTTCTTSCCBTTCCCCBCCCS
T ss_pred HHHHHHHHHHHHhCCcEEEECCCCCCCC-ccccccHHHHHHHHHHhCCcEEEEeCCCCCCcCCccccccccCCCcceecC
Confidence 7899999999999999999999987321 233467788899999999999999999999632 22 2
Q ss_pred ccCCCceEEecCCccCCccceEEEe-CCCeEEEeEEeecCCCC-CCceeeEEecCCCCccccccccCCCCCCCccceeEE
Q 004278 336 TNLAPWIVTVGAGTIDRNFPAEVRL-GDGRRLSGVSLYAGAPL-SEKMYPLIYPGKSGVLSASLCMENSLDPNLVRGKIV 413 (764)
Q Consensus 336 ~~~~p~vitVgAst~d~~~~~~~~~-~~g~~~~g~~~~~~~~~-~~~~~plv~~~~~~~~~~~~C~~~~~~~~~~~gkiv 413 (764)
++.+||+|+|||++.++.+...+.+ +++....+.+++...++ ....+|+++.+. .|.+..+ .+++|||+
T Consensus 214 PA~~~~vitVgA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~-------g~~~~~~--~~v~Gkiv 284 (926)
T 1xf1_A 214 PAAADSTLTVASYSPDKQLTETVRVKTADQQDKEMPVLSTNRFEPNKAYDYAYANR-------GTKEDDF--KDVKGKIA 284 (926)
T ss_dssp CTTTCCSEEEEEEBCSEEEEEEEEEECTTSCEEEEEEEEESCCCTTCCEEEEECTT-------SCSTTTT--TTCTTSEE
T ss_pred cccCCceEEEeccccccccccceEEEcCCCcceeeEEEecCCCCCCceEEEEECCC-------CCCccch--hhcCCeEE
Confidence 3458999999999999999998888 66666666666554444 357899999754 3776666 68999999
Q ss_pred EEecCCCchhhHHHHHHHcCceEEEEeccCCCCCccc------------HHHHHHHHHcCCCCeEEEEeccee--ecccC
Q 004278 414 ICDRGSSPRVAKGLVVKKAGGVGMILANGISNGEGLV------------GDAVKAYISSTANPTATIDFKGTI--LGIKP 479 (764)
Q Consensus 414 l~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~------------~~~~~~y~~~~~~~~~~i~~~~t~--~~~~~ 479 (764)
+|+|+.|.+.+|..+++++|+.|+|++|+......+. ......+|.+ .+.++|.+..+. .+...
T Consensus 285 l~~rg~~~~~~k~~~~~~~Ga~gvi~~n~~~~~~~~~~~~~~~iP~~~i~~~~g~~l~~--~~~~ti~~~~~~~~~~~~~ 362 (926)
T 1xf1_A 285 LIERGDIDFKDKIAKAKKAGAVGVLIYDNQDKGFPIELPNVDQMPAAFISRKDGLLLKD--NPQKTITFNATPKVLPTAS 362 (926)
T ss_dssp EEECCSSCHHHHHHHHHHTTCSEEEEECSSTTCCCEECCCSTTCCEEEECHHHHHHHHH--CSSCEEEECSSCEEEECSS
T ss_pred EEECCCCCHHHHHHHHHhCCCcEEEEEecCCCCcccccCccccccEEEEeHHHHHHHHh--CCceEEEecccceecccCC
Confidence 9999999999999999999999999999875432110 1133455555 345566666543 55567
Q ss_pred CCeeecccCCCCCCCCCCCCCCcEEcCCCcEEecccCCCCCCCCCCCCccceeEEeccccchhhhHHHHHHHHh----hh
Q 004278 480 APVVASFSARGPNGLNPEILKPDLIAPGVNILAAWTEAVGPTGLDSDLRKTEFNILSGTSMACPHVSGAAALLK----SA 555 (764)
Q Consensus 480 ~~~~a~fSS~Gp~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAGvaALl~----~~ 555 (764)
.+.++.||||||+ .+++|||||+|||++|+++++.+ .|..+||||||||||||+||||+ +.
T Consensus 363 ~~~~a~FSSrGp~--~~~~lKPDI~APG~~I~sa~~~~-------------~y~~~SGTSMAaPhVAG~aALl~q~~k~~ 427 (926)
T 1xf1_A 363 GTKLSRFSSWGLT--ADGNIKPDIAAPGQDILSSVANN-------------KYAKLSGTSMSAPLVAGIMGLLQKQYETQ 427 (926)
T ss_dssp CSBCCTTSCCCBC--TTSCBSCCEEEECCCEEESSSCS-------------SSCEEESCTTHHHHHHHHHHHHHHHHHHS
T ss_pred cceeccccCCCCC--CCCccCceEECCCCCEEeeccCC-------------cceecCccchhHHHHHHHHHHHHHHHhcc
Confidence 7899999999999 46999999999999999999865 79999999999999999999995 56
Q ss_pred CCCCCHHH----HHHHHHhccccccCCCCCCCccCCCCCCCCCCCCCCcccccccCCCCceecCCchhhhhhhccCCCCc
Q 004278 556 HPDWSPAA----IRSAMMTTASIVDNSNQPMTDEATGNASTPYDFGAGHVNLDRAMDPGLVYDITNDDYVNFLCANGYGP 631 (764)
Q Consensus 556 ~P~~sp~~----ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~G~G~vn~~~Al~~glv~d~~~~dy~~~lc~~~~~~ 631 (764)
||+|+|+| ||++||+||++++..+ ....+++++||+|+||+.+|++|.+ |||..+++.
T Consensus 428 ~P~~sp~~~~~~Iks~L~~TA~~~~~~~-------~~~~~~~~~~G~G~vn~~~A~~~~~-----------~l~~~~~~~ 489 (926)
T 1xf1_A 428 YPDMTPSERLDLAKKVLMSSATALYDED-------EKAYFSPRQQGAGAVDAKKASAATM-----------YVTDKDNTS 489 (926)
T ss_dssp SSSSHHHHHHHHHHHHHHHHSBCCEEGG-------GTEECCHHHHTTCBCCHHHHHHCSE-----------EEEESSSSC
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCcccCC-------CCccCChhccCCCccCHHHhcCCCe-----------EEEcCCCCc
Confidence 99999997 9999999999875432 1234677899999999999999854 678776543
Q ss_pred cceeEeecccccCCCCCCCCCCCCCCceeeeeccCcCcceeEEEEEEEEecCCC--CeEEEEEEEc--CCCCeEEEEecC
Q 004278 632 KLIQVITRIPARCPAKRPRPENLNYPSIAALFSTQSRGVSSKSFIRTVTNVGQP--NAVYTVKVVS--PEKGVTVTVKPS 707 (764)
Q Consensus 632 ~~~~~~~~~~~~c~~~~~~~~~lN~ps~~~~~~~~~~~~~~~~~~rtvtNvg~~--~~ty~~~~~~--p~~g~~v~v~p~ 707 (764)
.+ |.+.... ...+++|||||+|+. ..+|++.+.. | .++.++|+|.
T Consensus 490 ~~-------------------------i~l~~~~-----~~~~~~~tv~N~g~~~~~~~y~~~v~~~~~-~~~~~~v~p~ 538 (926)
T 1xf1_A 490 SK-------------------------VHLNNVS-----DKFEVTVNVHNKSDKPQELYYQATVQTDKV-DGKHFALAPK 538 (926)
T ss_dssp SC-------------------------EEEEEEC-----SEEEEEEEEEECSSSCEEEEEEEEEEEEEE-ETTEEEEEEE
T ss_pred ce-------------------------eeccccC-----ccEEEEEEEEEeCCCceeEEEEEEEEeccC-CCceEEeccc
Confidence 22 2222111 467899999999985 4578888775 6 7889999888
Q ss_pred eeEecc-------CceEEEEEEEEEeccc--c---cccCCCccEEEEEEEE--CCccE-EEEEEEEEec
Q 004278 708 RLVFTE-------GVKKSSFVVTVTADSK--N---LVLNDSGAAFGSISWS--DGKHE-VRSPLVVTQL 761 (764)
Q Consensus 708 ~l~~~~-------~~~~~~~~vt~~~~~~--~---~~~~~~~~~~G~~~~~--~~~~~-v~~p~~v~~~ 761 (764)
.|.|.. +||+++|+|||+.... . ..+.+.+ +||+|+|+ ++.|. ||+||+++..
T Consensus 539 ~l~~~~~~~vtv~ag~~~~~~vt~~~~~~~~~~~~~~~~~~~-~~G~i~~~~~~~~~~~v~~P~~~~~g 606 (926)
T 1xf1_A 539 VLYETSWQKITIPANSSKQVTVPIDASRFSKDLLAQMKNGYF-LEGFVRFKQDPTKEELMSIPYIGFRG 606 (926)
T ss_dssp EEEECCCEEEEECTTEEEEEEEEEECHHHHHHHHHHSTTCEE-EEEEEEEESSTTSCCCEEEEEEEEES
T ss_pred eeEeccCCeEEECCCCEEEEEEEEEcCccchhhcccccCCcE-EEEEEEEEeCCCCCCEEEeeeEEEec
Confidence 776654 4999999999997520 0 0124456 89999999 56665 9999999765
No 4
>3afg_A Subtilisin-like serine protease; propeptide, thermococcus kodakaraensis, hydrolas protease; 2.00A {Thermococcus kodakarensis}
Probab=100.00 E-value=6e-61 Score=549.35 Aligned_cols=368 Identities=31% Similarity=0.446 Sum_probs=287.4
Q ss_pred CCCceEEEEeCCCCCCCCCcchHHHHHhhhcCCceeEEEecceeeEEEEEcCHHHHHHH-----------hCCCCeEEEE
Q 004278 33 QTVKTFIFRIDSQSKPSIFPTHYHWYSSEFASPVQILHTYDTVFHGFSATLSPDQAASL-----------SRHPSVLAVI 101 (764)
Q Consensus 33 ~~~~~yIV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~ng~s~~~~~~~~~~L-----------~~~p~V~~V~ 101 (764)
.+...|||.|+++.... ...++++. +. .++.++|+ .|+||+++++++++++| +++|+|++|+
T Consensus 33 ~~~~~~iV~~~~~~~~~---~~~~~~~~-~g--~~v~~~~~-~~~g~~~~l~~~~~~~l~~~~~~~~~~~~~~~~V~~v~ 105 (539)
T 3afg_A 33 DQEVSTIIMFDNQADKE---KAVEILDF-LG--AKIKYNYH-IIPALAVKIKVKDLLIIAGLMDTGYFGNAQLSGVQFIQ 105 (539)
T ss_dssp TCEEEEEEEESSHHHHH---HHHHHHHH-HT--CEEEEECS-SSSEEEEEEEHHHHHHHTTCSCCC---CCCCTTEEEEE
T ss_pred cCceEEEEEECCCCCHH---HHHHHHHh-cC--CeEEEEee-eeeEEEEEeCHHHHHHHHhhccccccccccCCCeeEEE
Confidence 34567999999754211 11122221 11 68899997 79999999999999999 8899999999
Q ss_pred eccccccCcCCC--CcccCCcccCCCccCCCCCCCcEEEEEecCCCCCCCCccCCCCCCCCCcceeeeecccccCcccCC
Q 004278 102 EDQRRQLHTTRS--PQFLGLRNQQGLWSESDYGSDVIIGVFDTGIWPERRSFSDLNIGSIPSKWKGVCQVGVKFTAKNCN 179 (764)
Q Consensus 102 ~~~~~~~~~~~s--~~~~g~~~~~~~~~~~~~G~gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n 179 (764)
+++.+++..... ...+...+...+|..+.+|+||+|||||||||++||+|.+
T Consensus 106 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~gv~VaViDtGid~~Hpdl~~-------------------------- 159 (539)
T 3afg_A 106 EDYVVKVAVETEGLDESAAQVMATNMWNLGYDGSGITIGIIDTGIDASHPDLQG-------------------------- 159 (539)
T ss_dssp ECCEEECC-----------CCBCSCCBCCSCCCTTCEEEEEESBCCTTSGGGTT--------------------------
T ss_pred ecccccccCccccCCccccccCcHhHHhcCCCCCCcEEEEEecCCCCCChHHhC--------------------------
Confidence 999988754321 1112233345789999999999999999999999999963
Q ss_pred ceeeeeeeccccccccCCCCCCCCCCCCCccccCCCCCCCCChhhhHHHhcccCCCCCCccccccceeeeecCCCcEEEE
Q 004278 180 KKIIGARFFSKGHEAAGGSAGPIGGGINETVEFMSPRDADGHGTHTASTAAGRHAFRASMEGYAAGVAKGVAPKARLAVY 259 (764)
Q Consensus 180 ~kiig~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~D~~gHGThVAgi~AG~~~~~~~~~G~~~g~~~GvAP~A~l~~~ 259 (764)
++++.++|..+ ...+.|.+||||||||||||+.... .|.+.||||+|+|+++
T Consensus 160 -~i~~~~d~~~~--------------------~~~~~D~~gHGThVAgiiag~~~~~-------~g~~~GvAp~A~l~~~ 211 (539)
T 3afg_A 160 -KVIGWVDFVNG--------------------KTTPYDDNGHGTHVASIAAGTGAAS-------NGKYKGMAPGAKLVGI 211 (539)
T ss_dssp -TEEEEEETTTC--------------------CSSCCBSSSHHHHHHHHHHCCCGGG-------TTTTCCSCTTCEEEEE
T ss_pred -CEeeeEECCCC--------------------CCCCCCCCCCHHHHHHHHhCcCccC-------CCCEEEECCCCEEEEE
Confidence 35555555542 1346788999999999999975432 2335799999999999
Q ss_pred EeecCCCCCCHHHHHHHHHHHHhC----CCcEEEeccCCCCCCCCCCCCCHHHHHHHHhhcCCcEEEEecCCCCCCCC--
Q 004278 260 KVCWKNAGCFDSDILAAFDAAVND----GVDVISISIGGGDGISSPYYLDPIAIGSYGAASRGVFVSSSAGNDGPNGM-- 333 (764)
Q Consensus 260 kv~~~~~g~~~s~i~~ai~~A~~~----gvdVIn~SlG~~~g~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~-- 333 (764)
|++++.+.++.+++++||+||+++ |++|||||||.. ......+.+..++.++.++|++||+||||+|+...
T Consensus 212 kv~~~~g~~~~~~i~~ai~~a~~~~~~~g~~Vin~SlG~~---~~~~~~~~l~~ai~~a~~~GvlvV~AAGN~g~~~~~~ 288 (539)
T 3afg_A 212 KVLNGQGSGSISDIINGVDWAVQNKDKYGIKVINLSLGSS---QSSDGTDSLSQAVNNAWDAGLVVVVAAGNSGPNKYTV 288 (539)
T ss_dssp ECSCTTSEEEHHHHHHHHHHHHHTHHHHTEEEEEECCCCC---SCCCSCSHHHHHHHHHHHTTCEEEEECCSCCSSSSCC
T ss_pred EeecCCCCcCHHHHHHHHHHHHhhhhhcCCcEEEeCCCCC---CCCccchHHHHHHHHHHhcCCEEEEECCCCCCCCCcc
Confidence 999987237889999999999975 999999999987 33345688999999999999999999999998644
Q ss_pred ccccCCCceEEecCCccCCccceEEEeCCCeEEEeEEeecCCCCCCceeeEEecCCCCccccccccCCCCCCCccceeEE
Q 004278 334 SVTNLAPWIVTVGAGTIDRNFPAEVRLGDGRRLSGVSLYAGAPLSEKMYPLIYPGKSGVLSASLCMENSLDPNLVRGKIV 413 (764)
Q Consensus 334 ~~~~~~p~vitVgAst~d~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~plv~~~~~~~~~~~~C~~~~~~~~~~~gkiv 413 (764)
..++..+++|+|||++.
T Consensus 289 ~~Pa~~~~vitVgA~~~--------------------------------------------------------------- 305 (539)
T 3afg_A 289 GSPAAASKVITVGAVDK--------------------------------------------------------------- 305 (539)
T ss_dssp CTTTTCSSSEEEEEECT---------------------------------------------------------------
T ss_pred cCCccCCceEEEeeecC---------------------------------------------------------------
Confidence 45678899999998321
Q ss_pred EEecCCCchhhHHHHHHHcCceEEEEeccCCCCCcccHHHHHHHHHcCCCCeEEEEecceeecccCCCeeecccCCCCCC
Q 004278 414 ICDRGSSPRVAKGLVVKKAGGVGMILANGISNGEGLVGDAVKAYISSTANPTATIDFKGTILGIKPAPVVASFSARGPNG 493 (764)
Q Consensus 414 l~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~y~~~~~~~~~~i~~~~t~~~~~~~~~~a~fSS~Gp~~ 493 (764)
.+.++.||||||+.
T Consensus 306 ------------------------------------------------------------------~~~~a~fSs~Gp~~ 319 (539)
T 3afg_A 306 ------------------------------------------------------------------YDVITDFSSRGPTA 319 (539)
T ss_dssp ------------------------------------------------------------------TSCBCSSSCCCCCT
T ss_pred ------------------------------------------------------------------CcccccccCCCCCC
Confidence 12679999999985
Q ss_pred CCCCCCCCcEEcCCCcEEecccCCCCCCCCCCCCccceeEEeccccchhhhHHHHHHHHhhhCCCCCHHHHHHHHHhccc
Q 004278 494 LNPEILKPDLIAPGVNILAAWTEAVGPTGLDSDLRKTEFNILSGTSMACPHVSGAAALLKSAHPDWSPAAIRSAMMTTAS 573 (764)
Q Consensus 494 ~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAGvaALl~~~~P~~sp~~ik~~L~~TA~ 573 (764)
++++||||+|||++|+++++...... +.....|..++|||||||||||++|||+|+||+|+|++||++|++||+
T Consensus 320 --~~~~kpdi~APG~~I~s~~~~~~~~~----~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~p~~s~~~vk~~L~~tA~ 393 (539)
T 3afg_A 320 --DNRLKPEVVAPGNWIIAARASGTSMG----QPINDYYTAAPGTAMATPHVAGIAALLLQAHPSWTPDKVKTALIETAD 393 (539)
T ss_dssp --TCBCCCSEEEECSSEEEECCTTCCCS----EECSSSEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSB
T ss_pred --CCCCcccEecCcCCEEeeccCCCCCC----CCCcccccccCchHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCc
Confidence 48999999999999999986542110 001125999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCccCCCCCCCCCCCCCCcccccccCCCC
Q 004278 574 IVDNSNQPMTDEATGNASTPYDFGAGHVNLDRAMDPG 610 (764)
Q Consensus 574 ~~~~~~~~~~~~~~~~~~~~~~~G~G~vn~~~Al~~g 610 (764)
++...+ .+++.||+|+||+.+|++..
T Consensus 394 ~~~~~~-----------~~~~~~G~G~vn~~~Al~~~ 419 (539)
T 3afg_A 394 IVKPDE-----------IADIAYGAGRVNAYKAAYYD 419 (539)
T ss_dssp CSSGGG-----------CSBTTTBTCBCCHHHHHTGG
T ss_pred cCCCCC-----------CCccCccCCccCHHHHhhhc
Confidence 874211 24568999999999999843
No 5
>2z2z_A TK-subtilisin precursor; thermococcus kodakaraensis, hydrolase; 1.87A {Thermococcus kodakarensis} PDB: 2e1p_A 2zwp_A 2zwo_A
Probab=100.00 E-value=1.9e-58 Score=512.14 Aligned_cols=343 Identities=26% Similarity=0.343 Sum_probs=274.5
Q ss_pred CceEEEEeCCCCCCCCCcchHHHHHhhhcCCceeEEEecceeeEEEEEcCHHHHHHHhCCCCeEEEEeccccccCcCCC-
Q 004278 35 VKTFIFRIDSQSKPSIFPTHYHWYSSEFASPVQILHTYDTVFHGFSATLSPDQAASLSRHPSVLAVIEDQRRQLHTTRS- 113 (764)
Q Consensus 35 ~~~yIV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~ng~s~~~~~~~~~~L~~~p~V~~V~~~~~~~~~~~~s- 113 (764)
+.+|||+|+++.. ..+.++.. ..++.++|. .+++|+++++++++++|+++|+|++|++++.++++....
T Consensus 2 ~~~~iV~~~~~~~------~~~~~~~~---g~~v~~~~~-~~~~~~~~~~~~~~~~L~~~p~V~~v~~~~~~~~~~~~~~ 71 (395)
T 2z2z_A 2 TIRVIVSVDKAKF------NPHEVLGI---GGHIVYQFK-LIPAVVVDVPANAVGKLKKMPGVEKVEFDHQAVLLGKPSW 71 (395)
T ss_dssp EEEEEEEECTTTC------CHHHHHHT---TCEEEEECS-SSSEEEEEEEGGGHHHHHTSTTEEEEEECCEEEECCEECC
T ss_pred cEEEEEEECCCcc------HHHHHHHc---CCEEEEEec-cCCEEEEEECHHHHHHHHcCCCceEEEEeeeecccCCCCc
Confidence 4689999998742 11222221 168999998 599999999999999999999999999999887643221
Q ss_pred ----------CcccCCcc--cCCCccCCCCCCC--cEEEEEecCCCCCCCCccCCCCCCCCCcceeeeecccccCcccCC
Q 004278 114 ----------PQFLGLRN--QQGLWSESDYGSD--VIIGVFDTGIWPERRSFSDLNIGSIPSKWKGVCQVGVKFTAKNCN 179 (764)
Q Consensus 114 ----------~~~~g~~~--~~~~~~~~~~G~g--v~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n 179 (764)
...|++.. ...+|..+ +|+| |+|||||||||++||+|.++
T Consensus 72 ~~~~~~~~~~~~~w~~~~i~~~~~w~~~-~G~g~~v~VaViDtGid~~Hp~l~~~------------------------- 125 (395)
T 2z2z_A 72 LGGGSTQPAQTIPWGIERVKAPSVWSIT-DGSVSVIQVAVLDTGVDYDHPDLAAN------------------------- 125 (395)
T ss_dssp ------CCSCCCCHHHHHTTCGGGGGTC-SSCCTTCEEEEEESCBCTTCTTTGGG-------------------------
T ss_pred ccccccCccccCCcchhhcCHHHHHhhc-CCCCCcEEEEEEcCCCCCCChhHhhc-------------------------
Confidence 12344433 24689988 8999 99999999999999999742
Q ss_pred ceeeeeeeccccccccCCCCCCCCCCCCCccccCCCCCCCCChhhhHHHhcccCCCCCCccccccceeeeecCCCcEEEE
Q 004278 180 KKIIGARFFSKGHEAAGGSAGPIGGGINETVEFMSPRDADGHGTHTASTAAGRHAFRASMEGYAAGVAKGVAPKARLAVY 259 (764)
Q Consensus 180 ~kiig~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~D~~gHGThVAgi~AG~~~~~~~~~G~~~g~~~GvAP~A~l~~~ 259 (764)
++..++|..+... .+..++.|..||||||||||+|.. ++.+ +.||||+|+|+.+
T Consensus 126 --~~~~~~~~~~~~~---------------~~~~~~~d~~gHGT~vAgiia~~~-n~~g--------~~GvAp~a~l~~~ 179 (395)
T 2z2z_A 126 --IAWCVSTLRGKVS---------------TKLRDCADQNGHGTHVIGTIAALN-NDIG--------VVGVAPGVQIYSV 179 (395)
T ss_dssp --EEEEEECGGGCCB---------------CCHHHHBCSSSHHHHHHHHHHCCC-SSSS--------CCCSSTTCEEEEE
T ss_pred --cccCccccCCccc---------------CCCCCCCCCCCCHHHHHHHHHeec-CCCc--------eEEECCCCEEEEE
Confidence 3333334332100 000124678999999999999973 2211 4799999999999
Q ss_pred EeecCCCCCCHHHHHHHHHHHHhC--------------------CCcEEEeccCCCCCCCCCCCCCHHHHHHHHhhcCCc
Q 004278 260 KVCWKNAGCFDSDILAAFDAAVND--------------------GVDVISISIGGGDGISSPYYLDPIAIGSYGAASRGV 319 (764)
Q Consensus 260 kv~~~~~g~~~s~i~~ai~~A~~~--------------------gvdVIn~SlG~~~g~~~~~~~~~~~~a~~~a~~~Gi 319 (764)
|++++.+.++.+++++||+||+++ +++|||||||... ....+..++.++.++|+
T Consensus 180 kv~~~~g~~~~~~i~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~Vin~S~G~~~------~~~~~~~ai~~a~~~gv 253 (395)
T 2z2z_A 180 RVLDARGSGSYSDIAIGIEQAILGPDGVADKDGDGIIAGDPDDDAAEVISMSLGGPA------DDSYLYDMIIQAYNAGI 253 (395)
T ss_dssp ECSCTTSEEEHHHHHHHHHHHHHTTTTCSSTTCSSCCTTCTTSCCCSEEEECEEBSC------CCHHHHHHHHHHHHTTC
T ss_pred EEecCCCCccHHHHHHHHHHHHhCccccccccccccccccccCCCCeEEEecCCCCC------CCHHHHHHHHHHHHCCC
Confidence 999887237888999999999988 9999999999872 23567778888999999
Q ss_pred EEEEecCCCCCCCCccccCCCceEEecCCccCCccceEEEeCCCeEEEeEEeecCCCCCCceeeEEecCCCCcccccccc
Q 004278 320 FVSSSAGNDGPNGMSVTNLAPWIVTVGAGTIDRNFPAEVRLGDGRRLSGVSLYAGAPLSEKMYPLIYPGKSGVLSASLCM 399 (764)
Q Consensus 320 ~vV~AAGN~G~~~~~~~~~~p~vitVgAst~d~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~plv~~~~~~~~~~~~C~ 399 (764)
+||+||||+|.....+++..|++|+|||++.
T Consensus 254 ~vV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~------------------------------------------------- 284 (395)
T 2z2z_A 254 VIVAASGNEGAPSPSYPAAYPEVIAVGAIDS------------------------------------------------- 284 (395)
T ss_dssp EEEEECCSSCCSSCCBTTTSTTEEEEEEECT-------------------------------------------------
T ss_pred EEEEECCCCCCCCCCCccCCCCEEEEEEecC-------------------------------------------------
Confidence 9999999999887788899999999999421
Q ss_pred CCCCCCCccceeEEEEecCCCchhhHHHHHHHcCceEEEEeccCCCCCcccHHHHHHHHHcCCCCeEEEEecceeecccC
Q 004278 400 ENSLDPNLVRGKIVICDRGSSPRVAKGLVVKKAGGVGMILANGISNGEGLVGDAVKAYISSTANPTATIDFKGTILGIKP 479 (764)
Q Consensus 400 ~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~y~~~~~~~~~~i~~~~t~~~~~~ 479 (764)
T Consensus 285 -------------------------------------------------------------------------------- 284 (395)
T 2z2z_A 285 -------------------------------------------------------------------------------- 284 (395)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCeeecccCCCCCCCCCCCCCCcEEcCCCcEEecccCCCCCCCCCCCCccceeEEeccccchhhhHHHHHHHHhhhCC--
Q 004278 480 APVVASFSARGPNGLNPEILKPDLIAPGVNILAAWTEAVGPTGLDSDLRKTEFNILSGTSMACPHVSGAAALLKSAHP-- 557 (764)
Q Consensus 480 ~~~~a~fSS~Gp~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAGvaALl~~~~P-- 557 (764)
.+.++.||+||| +|+|||++|+++++.+ .|..++|||||||||||++|||+|++|
T Consensus 285 ~~~~a~fS~~G~----------~v~APG~~i~s~~~~~-------------~y~~~sGTS~AaP~VaG~aAll~~~~p~~ 341 (395)
T 2z2z_A 285 NDNIASFSNRQP----------EVSAPGVDILSTYPDD-------------SYETLMGTAMATPHVSGVVALIQAAYYQK 341 (395)
T ss_dssp TSCBCTTSCSSC----------SEEEECSSEEEEETTT-------------EEEEEESHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCcccCCCC----------CEEeCCCCeeeecCCC-------------ceEecCCHHHHHHHHHHHHHHHHHhCccc
Confidence 136789999997 5799999999999875 899999999999999999999999999
Q ss_pred -----------CCCHHHHHHHHHhccccccCCCCCCCccCCCCCCCCCCCCCCcccccccCCC
Q 004278 558 -----------DWSPAAIRSAMMTTASIVDNSNQPMTDEATGNASTPYDFGAGHVNLDRAMDP 609 (764)
Q Consensus 558 -----------~~sp~~ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~G~G~vn~~~Al~~ 609 (764)
.|++.+||++|++||+++.. ++.+..||+|+||+.+|++.
T Consensus 342 ~~~~~~~~~~~~ls~~~v~~~L~~tA~~~~~------------~g~~~~~G~G~vd~~~A~~~ 392 (395)
T 2z2z_A 342 YGKILPVGTFDDISKNTVRGILHITADDLGP------------TGWDADYGYGVVRAALAVQA 392 (395)
T ss_dssp HSSCCCCCCTTCCSSSSHHHHHHHHSBCCSS------------SSSBTTTBTCBCCHHHHHHH
T ss_pred cccccccccccCCCHHHHHHHHHhhccccCC------------CCCCCCccCceeCHHHHHHH
Confidence 99999999999999998742 23456899999999999863
No 6
>3t41_A Epidermin leader peptide processing serine protea; structural genomics, center for structural genomics of infec diseases, csgid; 1.95A {Staphylococcus aureus} PDB: 3qfh_A
Probab=100.00 E-value=7.2e-57 Score=511.82 Aligned_cols=358 Identities=20% Similarity=0.247 Sum_probs=275.0
Q ss_pred CCceEEEEeCCCCCCCCCcchHHHHHhhhcCC-ceeEEEecceeeEEEEEcCHHHHHHHhC-CCCeEEEEeccccccCcC
Q 004278 34 TVKTFIFRIDSQSKPSIFPTHYHWYSSEFASP-VQILHTYDTVFHGFSATLSPDQAASLSR-HPSVLAVIEDQRRQLHTT 111 (764)
Q Consensus 34 ~~~~yIV~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~y~~~~ng~s~~~~~~~~~~L~~-~p~V~~V~~~~~~~~~~~ 111 (764)
..+.|||++++.. . +...+++. .++.+.|. .|++|+++++++++++|++ +|+|++|++++.+++...
T Consensus 43 ~~~~yiv~~~~~~------~----~~~~~~~~g~~v~~~~~-~~~~~~~~~~~~~~~~L~~~~p~V~~v~~~~~~~~~~~ 111 (471)
T 3t41_A 43 EELYYSVEYKNTA------T----FNKLVKKKSLNVVYNIP-ELHVAQIKMTKMHANALANYKNDIKYINATCSTCITSE 111 (471)
T ss_dssp CCEEEEEEESCHH------H----HHHHHHHHTCEEEEEEG-GGTEEEEEECHHHHHHHHTCTTTEEEEEECCSSCBCCC
T ss_pred CceEEEEEcCCHH------H----HHHHHHhCCCEEEEecC-CccEEEEEeCHHHHHHHHhcCCCCcEEEecceeccccc
Confidence 3568999887643 1 22222222 67888886 5999999999999999999 999999999998887544
Q ss_pred CCC----------cccCCccc---CCCccCCCCCCCcEEEEEecCCCCCCCCccCCCCCCCCCcceeeeecccccCcccC
Q 004278 112 RSP----------QFLGLRNQ---QGLWSESDYGSDVIIGVFDTGIWPERRSFSDLNIGSIPSKWKGVCQVGVKFTAKNC 178 (764)
Q Consensus 112 ~s~----------~~~g~~~~---~~~~~~~~~G~gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~ 178 (764)
... ..|++..+ ..+|..+.+|+||+|||||||||++||+|.+.-. .
T Consensus 112 ~~~~~~~~~~~~~~~w~l~~i~~~~~~~~~~~~G~gv~VaViDtGid~~Hp~~~~~~~-------~-------------- 170 (471)
T 3t41_A 112 KTIDRTSNESLFSRQWDMNKITNNGASYDDLPKHANTKIAIIDTGVMKNHDDLKNNFS-------T-------------- 170 (471)
T ss_dssp CCCCC---CCSCCCCHHHHTTTTTTGGGGGCCSSCCCCEEEEESCCCTTCTTTTTTBC-------T--------------
T ss_pred cccccCCCCccccccccHhhccCcHHHHhccCCCCCcEEEEEeCCCCCCChhHhcCcc-------c--------------
Confidence 321 12444333 3589999999999999999999999999986311 1
Q ss_pred CceeeeeeeccccccccCCCCCCCCCCCCCccccCCCCCCCCChhhhHHHhcccCCCCCCccccccceeeeecCCCcEEE
Q 004278 179 NKKIIGARFFSKGHEAAGGSAGPIGGGINETVEFMSPRDADGHGTHTASTAAGRHAFRASMEGYAAGVAKGVAPKARLAV 258 (764)
Q Consensus 179 n~kiig~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~D~~gHGThVAgi~AG~~~~~~~~~G~~~g~~~GvAP~A~l~~ 258 (764)
+.+.|..+......... ...+...+.|..||||||||||+|+.. +.||||+|+|+.
T Consensus 171 -----~~~~~~~~~~~~~~~~~-------~~~~~~~~~d~~gHGT~vAgiiaa~g~------------~~GvAp~a~l~~ 226 (471)
T 3t41_A 171 -----DSKNLVPLNGFRGTEPE-------ETGDVHDVNDRKGHGTMVSGQTSANGK------------LIGVAPNNKFTM 226 (471)
T ss_dssp -----TCEECCCTTCGGGCCTT-------CCCCTTCCCCSSSHHHHHHHHHHCBSS------------SBCSSTTSCEEE
T ss_pred -----CCcccccCCCccCCCcc-------cCCCCCCCcCCCCccchhhheeecCCc------------eeEECCCCeEEE
Confidence 11111111100000000 012234578899999999999998632 479999999999
Q ss_pred EEeecCCCCCCHHHHHHHHHHHHhCCCcEEEeccCCCCC--C--CC------CCCCCHHHHHHHHhhcCCcEEEEecCCC
Q 004278 259 YKVCWKNAGCFDSDILAAFDAAVNDGVDVISISIGGGDG--I--SS------PYYLDPIAIGSYGAASRGVFVSSSAGND 328 (764)
Q Consensus 259 ~kv~~~~~g~~~s~i~~ai~~A~~~gvdVIn~SlG~~~g--~--~~------~~~~~~~~~a~~~a~~~Gi~vV~AAGN~ 328 (764)
+|++++. .+..+++++||++|+++|++|||||||.... . .. ....+.+..++..+.++|++||+||||+
T Consensus 227 ~kv~~~~-~~~~~~i~~ai~~a~~~g~~Vin~S~G~~~~~~~~~~~~~~~~~~~~~~~~~~ai~~a~~~Gi~vV~AAGN~ 305 (471)
T 3t41_A 227 YRVFGSK-KTELLWVSKAIVQAANDGNQVINISVGSYIILDKNDHQTFRKDEKVEYDALQKAINYAKKKKSIVVAAAGND 305 (471)
T ss_dssp EECCSSS-CCCHHHHHHHHHHHHHTTCSEEEECCCEEEEECTTCCCSEESSCHHHHHHHHHHHHHHHHTTCEEEEECCSS
T ss_pred EEeccCC-CCcHHHHHHHHHHHHhCCCCEEEeCCCCCCCCccccccccccccchhHHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 9999886 7899999999999999999999999997410 0 00 0123567778888899999999999999
Q ss_pred CCCCC------------------ccccCCCceEEecCCccCCccceEEEeCCCeEEEeEEeecCCCCCCceeeEEecCCC
Q 004278 329 GPNGM------------------SVTNLAPWIVTVGAGTIDRNFPAEVRLGDGRRLSGVSLYAGAPLSEKMYPLIYPGKS 390 (764)
Q Consensus 329 G~~~~------------------~~~~~~p~vitVgAst~d~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~plv~~~~~ 390 (764)
|.... ..++.+|++|+|||++.
T Consensus 306 g~~~~~~~~~~~~~~~~~~~~~~~~Pa~~~~vitVgA~~~---------------------------------------- 345 (471)
T 3t41_A 306 GIDVNDKQKLKLQREYQGNGEVKDVPASMDNVVTVGSTDQ---------------------------------------- 345 (471)
T ss_dssp CCBTTCHHHHHHTTTCCSSSEEEEETTTSTTEEEEEEECT----------------------------------------
T ss_pred CcCCCcccccccccccccCCceeeccccCCCeEEEEeeCC----------------------------------------
Confidence 98654 26678899999998421
Q ss_pred CccccccccCCCCCCCccceeEEEEecCCCchhhHHHHHHHcCceEEEEeccCCCCCcccHHHHHHHHHcCCCCeEEEEe
Q 004278 391 GVLSASLCMENSLDPNLVRGKIVICDRGSSPRVAKGLVVKKAGGVGMILANGISNGEGLVGDAVKAYISSTANPTATIDF 470 (764)
Q Consensus 391 ~~~~~~~C~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~y~~~~~~~~~~i~~ 470 (764)
T Consensus 346 -------------------------------------------------------------------------------- 345 (471)
T 3t41_A 346 -------------------------------------------------------------------------------- 345 (471)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cceeecccCCCeeecccCCCCCCCCCCCCCCcEEcCCCc----------------------EEecccCCCCCCCCCCCCc
Q 004278 471 KGTILGIKPAPVVASFSARGPNGLNPEILKPDLIAPGVN----------------------ILAAWTEAVGPTGLDSDLR 528 (764)
Q Consensus 471 ~~t~~~~~~~~~~a~fSS~Gp~~~~~~~lKPDI~APG~~----------------------I~sa~~~~~~~~~~~~~~~ 528 (764)
.+.++.||++||+. |||+|||++ |+++++.+
T Consensus 346 ---------~~~~a~fS~~G~~~-------~di~APG~~i~~~~~~g~~~~~~~~~~~~~~i~s~~~~~----------- 398 (471)
T 3t41_A 346 ---------KSNLSEFSNFGMNY-------TDIAAPGGSFAYLNQFGVDKWMNEGYMHKENILTTANNG----------- 398 (471)
T ss_dssp ---------TSSBCTTCCBCTTT-------CCEEEECCCCHHHHHHHHHHHHHTTTHHHHSEEEECTTS-----------
T ss_pred ---------CCCCCCccCCCCCC-------CeEEecCCCcccccccccccccccccccCceeEecCCCC-----------
Confidence 13678999999973 799999987 88888765
Q ss_pred cceeEEeccccchhhhHHHHHHHHhhhCC-CCCHHHHHHHHHhccccccCCCCCCCccCCCCCCCCCCCCCCcccccccC
Q 004278 529 KTEFNILSGTSMACPHVSGAAALLKSAHP-DWSPAAIRSAMMTTASIVDNSNQPMTDEATGNASTPYDFGAGHVNLDRAM 607 (764)
Q Consensus 529 ~~~y~~~sGTSmAaP~VAGvaALl~~~~P-~~sp~~ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~G~G~vn~~~Al 607 (764)
.|..++|||||||||||++|||+|++| .|+|++||++|++||++... .++..||+|+||+.+|+
T Consensus 399 --~~~~~sGTS~AaP~VAG~aAll~~~~p~~~~~~~v~~~L~~tA~~~~~-------------~~~~~~G~G~vd~~~Al 463 (471)
T 3t41_A 399 --RYIYQAGTALATPKVSGALALIIDKYHLEKHPDKAIELLYQHGTSKNN-------------KPFSRYGHGELDVYKAL 463 (471)
T ss_dssp --SEEEECSHHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHSBCCSC-------------CCHHHHTTCBBCHHHHT
T ss_pred --CEEeecchHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhCCCCCC-------------CCcCccccChhCHHHHH
Confidence 799999999999999999999999999 89999999999999997632 44568999999999999
Q ss_pred CCC
Q 004278 608 DPG 610 (764)
Q Consensus 608 ~~g 610 (764)
+..
T Consensus 464 ~~a 466 (471)
T 3t41_A 464 NVA 466 (471)
T ss_dssp TTT
T ss_pred HHH
Confidence 843
No 7
>2p4e_P Proprotein convertase subtilisin/kexin type 9; protease, LDL receptor, LDL, endocytosis, hydrol; 1.98A {Homo sapiens}
Probab=100.00 E-value=9.1e-59 Score=533.59 Aligned_cols=332 Identities=25% Similarity=0.294 Sum_probs=60.1
Q ss_pred CceEEEEeCCCCCCCCCcchHHHHHhhhcC---CceeEEEecceeeEEEEEcCHHHHHHHhCCCCeEEEEeccccccCcC
Q 004278 35 VKTFIFRIDSQSKPSIFPTHYHWYSSEFAS---PVQILHTYDTVFHGFSATLSPDQAASLSRHPSVLAVIEDQRRQLHTT 111 (764)
Q Consensus 35 ~~~yIV~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~y~~~~ng~s~~~~~~~~~~L~~~p~V~~V~~~~~~~~~~~ 111 (764)
+++|||+||++........+.+++...+.+ ..++.+.|++.|+||+++++++++++|+++|+|++|++++.++.+ .
T Consensus 75 pg~YIV~lk~~~~~~~~~~~~~~l~a~~~~~g~~~~v~~~y~~~~~Gfsv~l~~~~l~~L~~~P~V~~Vepd~~v~~~-~ 153 (692)
T 2p4e_P 75 PGTYVVVLKEETHLSQSERTARRLQAQAARRGYLTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIEEDSSVFAQ-S 153 (692)
T ss_dssp EEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTCCCEEEEEECSSSCEEEEECCGGGHHHHHTSTTEEEEEEEEEEEEC--
T ss_pred CCcEEEEECCCCCHHHHHHHHHHHHHHHhhcccccceeeEeeccccEEEEEeCHHHHHHHHcCCCceEEEeccccccC-C
Confidence 459999999987655444555555543322 258999999999999999999999999999999999999987652 1
Q ss_pred CCCcccCCccc------CCCccCCCCCCCcEEEEEecCCCCCCCCccCCCCCCCCCcceeeeecccccCcccCCceeeee
Q 004278 112 RSPQFLGLRNQ------QGLWSESDYGSDVIIGVFDTGIWPERRSFSDLNIGSIPSKWKGVCQVGVKFTAKNCNKKIIGA 185 (764)
Q Consensus 112 ~s~~~~g~~~~------~~~~~~~~~G~gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~ 185 (764)
.. |++.++ ...|..+.+|+||+|+|||||||++||+|.++.. |. +|+
T Consensus 154 ~p---WgL~~i~~~~~~~~~w~~~~~G~GV~VaVIDTGId~~HpdL~gr~~------~~-------~~~----------- 206 (692)
T 2p4e_P 154 IP---WNLERITPPRYRADEYQPPDGGSLVEVYLLDTSIQSDHREIEGRVM------VT-------DFE----------- 206 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CC---cchhhcccccccccccccCCCCCCcEEEEEcCCCCCCChhhcCceE------ec-------ccc-----------
Confidence 22 455433 1368888899999999999999999999975310 00 010
Q ss_pred eeccccccccCCCCCCCCCCCCCccccCCCCCCCCChhhhHHHhcccCCCCCCccccccceeeeecCCCcEEEEEeecCC
Q 004278 186 RFFSKGHEAAGGSAGPIGGGINETVEFMSPRDADGHGTHTASTAAGRHAFRASMEGYAAGVAKGVAPKARLAVYKVCWKN 265 (764)
Q Consensus 186 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~D~~gHGThVAgi~AG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~ 265 (764)
+... .++ ......+.|.+||||||||||+|+. .||||+|+|+++|++++.
T Consensus 207 --~~~d---~dg-----------~~~~~~~~D~~GHGTHVAGiIAg~~--------------~GVAP~A~L~~vKVl~~~ 256 (692)
T 2p4e_P 207 --NVPE---EDG-----------TRFHRQASKCDSHGTHLAGVVSGRD--------------AGVAKGASMRSLRVLNCQ 256 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --cccC---CCC-----------CcccCCCCCCCCcHHHhhhHhhcCC--------------CccCCCCEEEEEEeecCC
Confidence 0000 000 0001346789999999999999873 599999999999999987
Q ss_pred CCCCHHHHHHHHHHHHhC------CCcEEEeccCCCCCCCCCCCCCHHHHHHHHhhcCCcEEEEecCCCCCCCC-ccccC
Q 004278 266 AGCFDSDILAAFDAAVND------GVDVISISIGGGDGISSPYYLDPIAIGSYGAASRGVFVSSSAGNDGPNGM-SVTNL 338 (764)
Q Consensus 266 ~g~~~s~i~~ai~~A~~~------gvdVIn~SlG~~~g~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~-~~~~~ 338 (764)
+.++.+++++||+|++++ +++|||||||+. . ...+..++.++.++||+||+||||+|.+.. ..++.
T Consensus 257 G~g~~s~ii~aI~~a~~~~~~~~~g~~VINmSlGg~---~----s~~l~~Ai~~A~~~GVlvVaAAGN~G~~~~~~sPA~ 329 (692)
T 2p4e_P 257 GKGTVSGTLIGLEFIRKSQLVQPVGPLVVLLPLAGG---Y----SRVLNAACQRLARAGVVLVTAAGNFRDDACLYSPAS 329 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCHHHHHHHHHHHHhhhhcccCCceEEEecCCCC---C----cHHHHHHHHHHHHCCCEEEEECCCCCCCCCccCccc
Confidence 337888999999999986 899999999976 2 345566677889999999999999998764 34788
Q ss_pred CCceEEecCCccCCccceEEEeCCCeEEEeEEeecCCCCCCceeeEEecCCCCccccccccCCCCCCCccceeEEEEecC
Q 004278 339 APWIVTVGAGTIDRNFPAEVRLGDGRRLSGVSLYAGAPLSEKMYPLIYPGKSGVLSASLCMENSLDPNLVRGKIVICDRG 418 (764)
Q Consensus 339 ~p~vitVgAst~d~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~plv~~~~~~~~~~~~C~~~~~~~~~~~gkivl~~~g 418 (764)
.|++|+|||++.+..
T Consensus 330 ~~~vItVGA~d~~~~----------------------------------------------------------------- 344 (692)
T 2p4e_P 330 APEVITVGATNAQDQ----------------------------------------------------------------- 344 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCEEEEEEEcCCCC-----------------------------------------------------------------
Confidence 899999999543211
Q ss_pred CCchhhHHHHHHHcCceEEEEeccCCCCCcccHHHHHHHHHcCCCCeEEEEecceeecccCCCeeecccCCCCCCCCCCC
Q 004278 419 SSPRVAKGLVVKKAGGVGMILANGISNGEGLVGDAVKAYISSTANPTATIDFKGTILGIKPAPVVASFSARGPNGLNPEI 498 (764)
Q Consensus 419 ~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~y~~~~~~~~~~i~~~~t~~~~~~~~~~a~fSS~Gp~~~~~~~ 498 (764)
....-+.||+|||.
T Consensus 345 ------------------------------------------------------------~a~~ss~fSn~G~~------ 358 (692)
T 2p4e_P 345 ------------------------------------------------------------PVTLGTLGTNFGRC------ 358 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ------------------------------------------------------------ccccccccCCCCCc------
Confidence 00011238999984
Q ss_pred CCCcEEcCCCcEEecccCCCCCCCCCCCCccceeEEeccccchhhhHHHHHHHHhhhCCCCCHHHHHHHHHhccccc
Q 004278 499 LKPDLIAPGVNILAAWTEAVGPTGLDSDLRKTEFNILSGTSMACPHVSGAAALLKSAHPDWSPAAIRSAMMTTASIV 575 (764)
Q Consensus 499 lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAGvaALl~~~~P~~sp~~ik~~L~~TA~~~ 575 (764)
|||+|||++|+++++.... .|..++|||||||||||++|||+|++|+|+|+|||++|++||.+.
T Consensus 359 --vDI~APG~~I~St~~~~~~-----------~y~~~SGTSmAAPhVAG~aALlls~~P~ltp~qVk~~L~~tA~~~ 422 (692)
T 2p4e_P 359 --VDLFAPGEDIIGASSDCST-----------CFVSQSGTSQAAAHVAGIAAMMLSAEPELTLAELRQRLIHFSAKD 422 (692)
T ss_dssp -----------------------------------------------------------------------------
T ss_pred --eeEEecCCcEEeeccCCCC-----------ceEeccchHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhcccc
Confidence 7999999999999986422 789999999999999999999999999999999999999999865
No 8
>1r6v_A Subtilisin-like serine protease; sandwich domain, propeptide, hydrolase; 1.70A {Fervidobacterium pennivorans} SCOP: c.41.1.1
Probab=100.00 E-value=2.1e-54 Score=500.77 Aligned_cols=375 Identities=23% Similarity=0.243 Sum_probs=273.9
Q ss_pred CCCCceEEEEeCCCCCCCCCcchHHHHHhhhcCCceeEEEecceeeEEEEEcCH----HHHHHHhC--CCCeEEEEeccc
Q 004278 32 DQTVKTFIFRIDSQSKPSIFPTHYHWYSSEFASPVQILHTYDTVFHGFSATLSP----DQAASLSR--HPSVLAVIEDQR 105 (764)
Q Consensus 32 ~~~~~~yIV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~ng~s~~~~~----~~~~~L~~--~p~V~~V~~~~~ 105 (764)
...+++|||+|++... ..+.++. +. .++.+.+. .+++++++++. +.+++|++ +|+|++|||+..
T Consensus 28 ~~~~~~~IV~~k~~~~------~~~~~~~-~g--~~v~~~~~-~i~~~~~~~~~~~~~~~~~~l~~~~~~~V~~vepd~~ 97 (671)
T 1r6v_A 28 EYTEGKILVGYNDRSE------VDKIVKA-VN--GKVVLELP-QIKVVSIKLNGMTVKQAYDKIKALALKGIRYVEPSYK 97 (671)
T ss_dssp SBCTTEEEEEESSHHH------HHHHHHH-HT--CEEEEEEG-GGTEEEEECSSCCHHHHHHHHTTSCCSSEEEEECCBC
T ss_pred ccCCccEEEEECCCcC------HHHHHHh-cC--CeEEEEcC-CCcEEEEEeCCcCHHHHHHHHHhccCCCceEEecCeE
Confidence 4468999999997431 1122221 21 57778876 68999999864 33567764 899999999987
Q ss_pred cccCcC----C-----------------------CCcccCCccc--CCC-ccCCCCCCCcEEEEEecCCCCCCCCccCCC
Q 004278 106 RQLHTT----R-----------------------SPQFLGLRNQ--QGL-WSESDYGSDVIIGVFDTGIWPERRSFSDLN 155 (764)
Q Consensus 106 ~~~~~~----~-----------------------s~~~~g~~~~--~~~-~~~~~~G~gv~VgVIDtGid~~Hp~f~~~~ 155 (764)
+++... . ....|++..+ ..+ |+. .+|+||+|||||||||++||+|.++-
T Consensus 98 ~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~l~~I~~~~a~w~~-~tG~gV~VAVIDTGVd~~HpdL~~~~ 176 (671)
T 1r6v_A 98 RELIKPTVVKPNPDMYKIRKPGLNSTARDYGEELSNELWGLEAIGVTQQLWEE-ASGTNIIVAVVDTGVDGTHPDLEGQV 176 (671)
T ss_dssp CEECCCEECCCCTTTTCSSSSCCSSSTTCCSSTTGGGCHHHHHTTCCHHHHHH-CSCTTCEEEEEESCCBTTSGGGTTTB
T ss_pred EEeccccccCcccccccccccccccccccccccccccCCchhccCCchhhhhc-cCCCCCEEEEEeCCCCCCCccccccE
Confidence 654310 0 0112343332 345 887 88999999999999999999997531
Q ss_pred CCCCCCcceeeeecccccCcccCCceeeeeeeccccccccCCCCCCCCCCCCCccccCCCCCCCCChhhhHHHhcccCCC
Q 004278 156 IGSIPSKWKGVCQVGVKFTAKNCNKKIIGARFFSKGHEAAGGSAGPIGGGINETVEFMSPRDADGHGTHTASTAAGRHAF 235 (764)
Q Consensus 156 ~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~D~~gHGThVAgi~AG~~~~ 235 (764)
+.+ .+.+.+... ....+..|.+||||||||||||.. +
T Consensus 177 -------~~g-------------------~~~~~~~~~----------------p~~~d~~d~~gHGThVAGiIAa~~-n 213 (671)
T 1r6v_A 177 -------IAG-------------------YRPAFDEEL----------------PAGTDSSYGGSAGTHVAGTIAAKK-D 213 (671)
T ss_dssp -------CCE-------------------EEGGGTEEE----------------CTTCBCCTTCSHHHHHHHHHHCCC-S
T ss_pred -------Eec-------------------ccccCCCcC----------------CCCCCCccCCCcchhhhhhhhccC-C
Confidence 111 111111000 001234567899999999999974 2
Q ss_pred CCCccccccceeeeecCCCcEEEEEeecC-----CCC-CCHHHHHHHHHHHHhCCCcEEEeccCCCCCCCCCCCCCHHHH
Q 004278 236 RASMEGYAAGVAKGVAPKARLAVYKVCWK-----NAG-CFDSDILAAFDAAVNDGVDVISISIGGGDGISSPYYLDPIAI 309 (764)
Q Consensus 236 ~~~~~G~~~g~~~GvAP~A~l~~~kv~~~-----~~g-~~~s~i~~ai~~A~~~gvdVIn~SlG~~~g~~~~~~~~~~~~ 309 (764)
+.+ +.||||+|+|+.+|+++. ..+ .....+++||+||+++|++|||||||+.. +...+..
T Consensus 214 g~g--------v~GVAP~A~I~~vkv~~~~~~~~g~g~~s~~~i~~ai~~A~~~gadVIN~SlG~~~------~s~~l~~ 279 (671)
T 1r6v_A 214 GKG--------IVGVAPGAKIMPIVIFDDPALVGGNGYVGDDYVAAGIIWATDHGAKVMNHSWGGWG------YSYTMKE 279 (671)
T ss_dssp SSS--------CCCSCTTSEEEEEESBCCHHHHCTTSBCCHHHHHHHHHHHHHTTCSEEEECEEBSC------CCHHHHH
T ss_pred CCc--------eEEECCCCEEEEEEeccCccccCCCCccCHHHHHHHHHHHHHcCCCEEEeCCCCCC------CCHHHHH
Confidence 211 479999999999999986 212 34567899999999999999999999862 2457788
Q ss_pred HHHHhhcCCcEEEEecCCCCCCC-CccccCCCceEEecCCccCCccceEEEeCCCeEEEeEEeecCCCCCCceeeEEecC
Q 004278 310 GSYGAASRGVFVSSSAGNDGPNG-MSVTNLAPWIVTVGAGTIDRNFPAEVRLGDGRRLSGVSLYAGAPLSEKMYPLIYPG 388 (764)
Q Consensus 310 a~~~a~~~Gi~vV~AAGN~G~~~-~~~~~~~p~vitVgAst~d~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~plv~~~ 388 (764)
++.+|.++|++||+||||+|... ..+++..|++|+|||.+.+..
T Consensus 280 Ai~~A~~~GvlvVaAAGN~g~~~~~~yPA~~~~VItVgA~d~~g~----------------------------------- 324 (671)
T 1r6v_A 280 AFDYAMEHGVVMVVSAGNNTSDSHHQYPAGYPGVIQVAALDYYGG----------------------------------- 324 (671)
T ss_dssp HHHHHHHTTCEEEEECCSCSSSCCCCBTTTSTTCEEEEEEEEETT-----------------------------------
T ss_pred HHHHHHhCCCEEEEeCCCCCCCCCccCcccCCCeEEEEEEcCCCC-----------------------------------
Confidence 88899999999999999999875 567788899999999432110
Q ss_pred CCCccccccccCCCCCCCccceeEEEEecCCCchhhHHHHHHHcCceEEEEeccCCCCCcccHHHHHHHHHcCCCCeEEE
Q 004278 389 KSGVLSASLCMENSLDPNLVRGKIVICDRGSSPRVAKGLVVKKAGGVGMILANGISNGEGLVGDAVKAYISSTANPTATI 468 (764)
Q Consensus 389 ~~~~~~~~~C~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~y~~~~~~~~~~i 468 (764)
T Consensus 325 -------------------------------------------------------------------------------- 324 (671)
T 1r6v_A 325 -------------------------------------------------------------------------------- 324 (671)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EecceeecccCCCeeecccCCCCCCCCCCCCCCcEEcCCCcEEecccCCCCCC-----CCCCCCccceeEEeccccchhh
Q 004278 469 DFKGTILGIKPAPVVASFSARGPNGLNPEILKPDLIAPGVNILAAWTEAVGPT-----GLDSDLRKTEFNILSGTSMACP 543 (764)
Q Consensus 469 ~~~~t~~~~~~~~~~a~fSS~Gp~~~~~~~lKPDI~APG~~I~sa~~~~~~~~-----~~~~~~~~~~y~~~sGTSmAaP 543 (764)
...++.|||+||. +||+|||++|+++++...... ..........|..++|||||||
T Consensus 325 -----------~~~~a~fSn~G~~--------vdv~APG~~I~St~p~~~~~g~~~~~~~~~~~~~~~y~~~sGTSmAAP 385 (671)
T 1r6v_A 325 -----------TFRVAGFSSRSDG--------VSVGAPGVTILSTVPGEDSIGYEGHNENVPATNGGTYDYYQGTSMAAP 385 (671)
T ss_dssp -----------EEEECSSSCCCTT--------EEEEEECSSEEEECCCTTSTTCCCCCTTCCCSSSCCEEEEESHHHHHH
T ss_pred -----------ceeeccccCCCCC--------eeEEecCCCEEeecCCCCccccccccccccccCCCceEEecCccHHHH
Confidence 0147899999997 599999999999987642110 0001112347999999999999
Q ss_pred hHHHHHHHHhhhCCCCCHHHHHHHHHhccccccCCCCCCCccCCCCCCCCCCCCCCcccccccCCCCceecCCchhh
Q 004278 544 HVSGAAALLKSAHPDWSPAAIRSAMMTTASIVDNSNQPMTDEATGNASTPYDFGAGHVNLDRAMDPGLVYDITNDDY 620 (764)
Q Consensus 544 ~VAGvaALl~~~~P~~sp~~ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~G~G~vn~~~Al~~glv~d~~~~dy 620 (764)
||||++|||+|++|+|+|++||++|++||+++.. ++.+..||+|+||+.+|++..|..+....||
T Consensus 386 ~VAGvaALl~s~~P~lt~~~Vr~~L~~TA~~~~~------------~g~d~~~G~G~vna~~Al~~~l~~~~~~~~~ 450 (671)
T 1r6v_A 386 HVTGVVAVLLQKFPNAKPWQIRKLLENTAFDFNG------------NGWDHDTGYGLVKLDAALQGPLPTQGGVEEF 450 (671)
T ss_dssp HHHHHHHHHHHHCTTCCHHHHHHHHHHHCBCSSS------------SSCBTTTBTCBCCHHHHHHCCCCSSSEEEEE
T ss_pred HHHHHHHHHHHHCCCCCHHHHHHHHHHhCcCCCC------------CCCCCCcccceeCHHHHhhhhcCCCCCccce
Confidence 9999999999999999999999999999998743 2345689999999999999888776655444
No 9
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=100.00 E-value=2.9e-54 Score=485.29 Aligned_cols=384 Identities=24% Similarity=0.340 Sum_probs=255.4
Q ss_pred CCCccCCCCCCCcEEEEEecCCCCCCCCccCCCCCCCCCcceeeeecccccCcccCCceeeeeeeccccccccCCCCCCC
Q 004278 123 QGLWSESDYGSDVIIGVFDTGIWPERRSFSDLNIGSIPSKWKGVCQVGVKFTAKNCNKKIIGARFFSKGHEAAGGSAGPI 202 (764)
Q Consensus 123 ~~~~~~~~~G~gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~g~~~~~~~~~~~ 202 (764)
..+|+.+ |+||+|+|||||||++||+|.+. .+.+ +++..
T Consensus 14 ~~~w~~~--g~gv~VaViDtGvd~~Hp~l~~~--------------------------~~~~-~~~~~------------ 52 (441)
T 1y9z_A 14 TVLSDSQ--AGNRTICIIDSGYDRSHNDLNAN--------------------------NVTG-TNNSG------------ 52 (441)
T ss_dssp SSSCCTT--GGGCEEEEEESCCCTTSTTTTTS--------------------------EEEE-CCCTT------------
T ss_pred hhhhhcC--CCCcEEEEEcCCCCCCChhHhcC--------------------------cccC-cccCC------------
Confidence 4688765 77999999999999999999743 1111 11111
Q ss_pred CCCCCCccccCCCCCCCCChhhhHHHhcccCCCCCCccccccceeeeecCCC--cEEEEEeecCCCCCCHHHHHHHHHHH
Q 004278 203 GGGINETVEFMSPRDADGHGTHTASTAAGRHAFRASMEGYAAGVAKGVAPKA--RLAVYKVCWKNAGCFDSDILAAFDAA 280 (764)
Q Consensus 203 ~~~~~~~~~~~~~~D~~gHGThVAgi~AG~~~~~~~~~G~~~g~~~GvAP~A--~l~~~kv~~~~~g~~~s~i~~ai~~A 280 (764)
..+...+.|..||||||||||+|..+. .| +.||||+| +|+.+|+++..+.++.+++++||+||
T Consensus 53 ------~~~~~~~~d~~gHGT~vAgiia~~~~~----~g-----~~GvAP~a~~~l~~~kv~~~~g~~~~~~~~~ai~~a 117 (441)
T 1y9z_A 53 ------TGNWYQPGNNNAHGTHVAGTIAAIANN----EG-----VVGVMPNQNANIHIVKVFNEAGWGYSSSLVAAIDTC 117 (441)
T ss_dssp ------SCCTTCCCSSCCHHHHHHHHHHCCCSS----SB-----CCCSSCSSCSEEEEEECEETTEECCSSCHHHHHHHH
T ss_pred ------CCCCCCCCCCCCcHHHHHHHHhcccCC----CC-----ceEecCCCCCEEEEEEEeCCCCCcCHHHHHHHHHHH
Confidence 011234678899999999999997532 11 47999995 89999999987227888999999999
Q ss_pred HhC-CCcEEEeccCCCCCCCCCCCCCHHHHHHHHhhcCCcEEEEecCCCCCCCCccccCCCceEEecCCccCCccceE--
Q 004278 281 VND-GVDVISISIGGGDGISSPYYLDPIAIGSYGAASRGVFVSSSAGNDGPNGMSVTNLAPWIVTVGAGTIDRNFPAE-- 357 (764)
Q Consensus 281 ~~~-gvdVIn~SlG~~~g~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~~p~vitVgAst~d~~~~~~-- 357 (764)
+++ |+||||||||... ....+..++.+|.++|++||+||||+|+....+++..|++|+|||++.+.....+
T Consensus 118 ~~~~g~~Vin~S~G~~~------~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~VgA~~~~~~~~~~S~ 191 (441)
T 1y9z_A 118 VNSGGANVVTMSLGGSG------STTTERNALNTHYNNGVLLIAAAGNAGDSSYSYPASYDSVMSVAAVDSNLDHAAFSQ 191 (441)
T ss_dssp HHTTCCSEEEECCCBSC------CBHHHHHHHHHHHHTTCEEEEECCSSSSSBCCBTTTSTTEEEEEEECTTCCBCTTSC
T ss_pred HHhcCCcEEEeCCCCCC------CCHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCCCCCCCeEEEEEECCCCCCCcccc
Confidence 999 9999999999872 1345677888899999999999999999888889999999999998876432111
Q ss_pred -----------------EEeCCCe----EEEeEEeecCCCCCC-ceee--EEecCCC----CccccccccCC--CCCCCc
Q 004278 358 -----------------VRLGDGR----RLSGVSLYAGAPLSE-KMYP--LIYPGKS----GVLSASLCMEN--SLDPNL 407 (764)
Q Consensus 358 -----------------~~~~~g~----~~~g~~~~~~~~~~~-~~~p--lv~~~~~----~~~~~~~C~~~--~~~~~~ 407 (764)
...+++. ++.|.+++....+.. ..++ +.|.... .......|... .+++.+
T Consensus 192 ~g~~vdv~ApG~~i~s~~~~g~g~~~~~~~~G~s~~~~~~~p~~~~~~~~~~~~~~~~~g~~~~~~~~C~~~~~~~~~~~ 271 (441)
T 1y9z_A 192 YTDQVEISGPGEAILSTVTVGEGRLADITIGGQSYFSNGVVPHNRLTPSGTSYAPAPINASATGALAECTVNGTSFSCGN 271 (441)
T ss_dssp CCTTEEEEEECSSEEEECSTTCEEEEEEEETTEECGGGCCEECEEEEEETTEEEECCCCCEEEEEEEEEEEETTEEECCC
T ss_pred CCCceEEEeccCCeeccccCCCcccceeecccccccccccCcccccccCCccccccccccccccchhccccccccccCCC
Confidence 1112221 223333332111100 0000 1111110 01123458753 567889
Q ss_pred cceeEEEEecCCC-----chhhHHHHHHHcCceEEEEeccCCCCCcccHHHHHHHHHcCCCCeEEEEecceeecccCCCe
Q 004278 408 VRGKIVICDRGSS-----PRVAKGLVVKKAGGVGMILANGISNGEGLVGDAVKAYISSTANPTATIDFKGTILGIKPAPV 482 (764)
Q Consensus 408 ~~gkivl~~~g~~-----~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~y~~~~~~~~~~i~~~~t~~~~~~~~~ 482 (764)
++|||++|+|+.+ .+.+|..+++++|+.|+|++|+......... .+.........|...+...
T Consensus 272 ~~gkivl~~rg~~~~~~~~~~~~~~~~~~aGa~gvii~~~~~~~g~~~~-~~~~~~~~~~~p~~~v~~~----------- 339 (441)
T 1y9z_A 272 MANKICLVERVGNQGSSYPEINSTKACKTAGAKGIIVYSNSALPGLQNP-FLVDANSDITVPSVSVDRA----------- 339 (441)
T ss_dssp CTTEEEEEECCSCSSSSCTHHHHHHHHHHTTCSEEEEECCTTSCSCCCC-EEECTTCCCCSCEEEECHH-----------
T ss_pred ccccEEEEeccccCcccccHHHHHHHHHhcCCeEEEEEeCCCccccccc-cccccccCccccEEEEeHH-----------
Confidence 9999999999876 6788999999999999999987542100000 0000000000000000000
Q ss_pred eecccCCCCCCCCCCCCCCcEEcCCCcEEecccCCCCCCCCCCCCccceeEEeccccchhhhHHHHHHHHhhhCCCCCHH
Q 004278 483 VASFSARGPNGLNPEILKPDLIAPGVNILAAWTEAVGPTGLDSDLRKTEFNILSGTSMACPHVSGAAALLKSAHPDWSPA 562 (764)
Q Consensus 483 ~a~fSS~Gp~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAGvaALl~~~~P~~sp~ 562 (764)
.|.... ..+.-.+. +++.. ...|..+||||||||||||++|||+|+||+|+|+
T Consensus 340 ------~g~~l~--~~~~~~~t------~~~~~-------------~~~y~~~sGTSmAaP~VAG~aALl~~~~p~~sp~ 392 (441)
T 1y9z_A 340 ------TGLALK--AKLGQSTT------VSNQG-------------NQDYEYYNGTSMATPHVSGVATLVWSYHPECSAS 392 (441)
T ss_dssp ------HHHHHH--TTTTSEEE------EEEEE-------------EESEEEECSHHHHHHHHHHHHHHHHHHCTTSCHH
T ss_pred ------HHHHHH--HHhcCCcc------ccccc-------------CCCceeecccccCCcccchHHHHHHHHCCCCCHH
Confidence 000000 00000010 01111 2279999999999999999999999999999999
Q ss_pred HHHHHHHhccccccCCCCCCCccCCCCCCCCCCCCCCcccccccCCCCceecCCchhhhhhhccCCCC
Q 004278 563 AIRSAMMTTASIVDNSNQPMTDEATGNASTPYDFGAGHVNLDRAMDPGLVYDITNDDYVNFLCANGYG 630 (764)
Q Consensus 563 ~ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~G~G~vn~~~Al~~glv~d~~~~dy~~~lc~~~~~ 630 (764)
+||++||+||++++..+ .+.+||+|+||+.+|+ ||+.|||+.++.
T Consensus 393 ~ik~~L~~TA~~~~~~g------------~~~~~G~G~vn~~~A~-----------~~~~~lc~~~~~ 437 (441)
T 1y9z_A 393 QVRAALNATADDLSVAG------------RDNQTGYGMINAVAAK-----------AYLDESCTGPTD 437 (441)
T ss_dssp HHHHHHHHHSBCCSSSS------------CBTTTBTCBCCHHHHH-----------HHHHHCTTCC--
T ss_pred HHHHHHHhhchhhccCC------------CcccccccccCHHHHH-----------HHHHhhhcCCCC
Confidence 99999999999875432 3458999999999996 599999998764
No 10
>1dbi_A AK.1 serine protease; hydrolase; 1.80A {Bacillus SP} SCOP: c.41.1.1
Probab=100.00 E-value=3.5e-51 Score=432.60 Aligned_cols=266 Identities=31% Similarity=0.375 Sum_probs=214.5
Q ss_pred ccCCccc--CCCccCCCCCCCcEEEEEecCCCCCCCCccCCCCCCCCCcceeeeecccccCcccCCceeeeeeecccccc
Q 004278 116 FLGLRNQ--QGLWSESDYGSDVIIGVFDTGIWPERRSFSDLNIGSIPSKWKGVCQVGVKFTAKNCNKKIIGARFFSKGHE 193 (764)
Q Consensus 116 ~~g~~~~--~~~~~~~~~G~gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~g~~ 193 (764)
.|++..+ ..+|+.+..|+||+|+|||||||++||+|.++ ++..++|.+.
T Consensus 12 ~w~l~~i~~~~aw~~~~g~~gv~VaViDtGvd~~hp~l~~~---------------------------~~~~~~~~~~-- 62 (280)
T 1dbi_A 12 QYGPQNTYTDYAWDVTKGSSGQEIAVIDTGVDYTHPDLDGK---------------------------VIKGYDFVDN-- 62 (280)
T ss_dssp CCTTGGGTHHHHTTTCCCCTTCEEEEEESCCCTTSTTTTTT---------------------------EEEEEETTTT--
T ss_pred CCChhhcCcHHHHhhcCCCCCCEEEEEeCCcCCCChhhccC---------------------------cccceeccCC--
Confidence 3555544 46899988788999999999999999999642 3333444331
Q ss_pred ccCCCCCCCCCCCCCccccCCCCCCCCChhhhHHHhcccCCCCCCccccccceeeeecCCCcEEEEEeecCCCCCCHHHH
Q 004278 194 AAGGSAGPIGGGINETVEFMSPRDADGHGTHTASTAAGRHAFRASMEGYAAGVAKGVAPKARLAVYKVCWKNAGCFDSDI 273 (764)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~D~~gHGThVAgi~AG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g~~~s~i 273 (764)
...+.|..||||||||||+|...+..+ +.||||+|+|+.+|+++..+.+..+++
T Consensus 63 ------------------~~~~~d~~gHGT~vAgiia~~~~~~~g--------~~GvAp~a~l~~~kv~~~~g~~~~~~i 116 (280)
T 1dbi_A 63 ------------------DYDPMDLNNHGTHVAGIAAAETNNATG--------IAGMAPNTRILAVRALDRNGSGTLSDI 116 (280)
T ss_dssp ------------------BSCCCCSSSHHHHHHHHHHCCCSSSSS--------CCCSSSSCEEEEEECCCTTSCCCHHHH
T ss_pred ------------------CCCCCCCCCcHHHHHHHHhCcCCCCCc--------ceEeCCCCEEEEEEEECCCCCcCHHHH
Confidence 124578899999999999998654332 479999999999999987734788899
Q ss_pred HHHHHHHHhCCCcEEEeccCCCCCCCCCCCCCHHHHHHHHhhcCCcEEEEecCCCCCCCCccccCCCceEEecCCccCCc
Q 004278 274 LAAFDAAVNDGVDVISISIGGGDGISSPYYLDPIAIGSYGAASRGVFVSSSAGNDGPNGMSVTNLAPWIVTVGAGTIDRN 353 (764)
Q Consensus 274 ~~ai~~A~~~gvdVIn~SlG~~~g~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~~p~vitVgAst~d~~ 353 (764)
++||+||+++|++|||||||... ....+..++.++.++|++||+||||+|......++..|++|+|||++.
T Consensus 117 ~~ai~~a~~~g~~Vin~S~G~~~------~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~--- 187 (280)
T 1dbi_A 117 ADAIIYAADSGAEVINLSLGCDC------HTTTLENAVNYAWNKGSVVVAAAGNNGSSTTFEPASYENVIAVGAVDQ--- 187 (280)
T ss_dssp HHHHHHHHHTTCSEEEECCSSCC------CCHHHHHHHHHHHHTTCEEEEECCBC---------CCTTSEEEEEECT---
T ss_pred HHHHHHHHHCCCCEEEeCCCCCC------CCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCccccCCeEEEEeeCC---
Confidence 99999999999999999999872 245678888889999999999999999887778888999999998421
Q ss_pred cceEEEeCCCeEEEeEEeecCCCCCCceeeEEecCCCCccccccccCCCCCCCccceeEEEEecCCCchhhHHHHHHHcC
Q 004278 354 FPAEVRLGDGRRLSGVSLYAGAPLSEKMYPLIYPGKSGVLSASLCMENSLDPNLVRGKIVICDRGSSPRVAKGLVVKKAG 433 (764)
Q Consensus 354 ~~~~~~~~~g~~~~g~~~~~~~~~~~~~~plv~~~~~~~~~~~~C~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~G 433 (764)
T Consensus 188 -------------------------------------------------------------------------------- 187 (280)
T 1dbi_A 188 -------------------------------------------------------------------------------- 187 (280)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceEEEEeccCCCCCcccHHHHHHHHHcCCCCeEEEEecceeecccCCCeeecccCCCCCCCCCCCCCCcEEcCCCcEEec
Q 004278 434 GVGMILANGISNGEGLVGDAVKAYISSTANPTATIDFKGTILGIKPAPVVASFSARGPNGLNPEILKPDLIAPGVNILAA 513 (764)
Q Consensus 434 a~g~i~~n~~~~~~~~~~~~~~~y~~~~~~~~~~i~~~~t~~~~~~~~~~a~fSS~Gp~~~~~~~lKPDI~APG~~I~sa 513 (764)
.+.++.||++||. |||+|||++|+++
T Consensus 188 ----------------------------------------------~~~~~~~S~~G~~--------~dv~ApG~~i~s~ 213 (280)
T 1dbi_A 188 ----------------------------------------------YDRLASFSNYGTW--------VDVVAPGVDIVST 213 (280)
T ss_dssp ----------------------------------------------TSCBCTTBCCSTT--------CCEEEECSSEEEE
T ss_pred ----------------------------------------------CCCcCCCCCCCCC--------ceEEEecCCeEee
Confidence 1257899999985 6999999999999
Q ss_pred ccCCCCCCCCCCCCccceeEEeccccchhhhHHHHHHHHhhhCCCCCHHHHHHHHHhccccccCCCCCCCccCCCCCCCC
Q 004278 514 WTEAVGPTGLDSDLRKTEFNILSGTSMACPHVSGAAALLKSAHPDWSPAAIRSAMMTTASIVDNSNQPMTDEATGNASTP 593 (764)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAGvaALl~~~~P~~sp~~ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~ 593 (764)
++.+ .|..++|||||||||||++|||++ |.+++.|||++|++||+++.. ..
T Consensus 214 ~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~--p~~t~~~v~~~L~~ta~~~~~--------------~~ 264 (280)
T 1dbi_A 214 ITGN-------------RYAYMSGTSMASPHVAGLAALLAS--QGRNNIEIRQAIEQTADKISG--------------TG 264 (280)
T ss_dssp ETTT-------------EEEEECSHHHHHHHHHHHHHHHHH--TTCCHHHHHHHHHHTSBCCTT--------------BT
T ss_pred cCCC-------------CEEEccCHHHHHHHHHHHHHHHHC--CCCCHHHHHHHHHHhCccCCC--------------CC
Confidence 8765 899999999999999999999987 899999999999999998742 12
Q ss_pred CCCCCCcccccccCC
Q 004278 594 YDFGAGHVNLDRAMD 608 (764)
Q Consensus 594 ~~~G~G~vn~~~Al~ 608 (764)
..||+|+||+.+|++
T Consensus 265 ~~~G~G~vn~~~A~~ 279 (280)
T 1dbi_A 265 TYFKYGRINSYNAVT 279 (280)
T ss_dssp TTBSSEECCHHHHHT
T ss_pred CcccCCEECHHHHhc
Confidence 479999999999976
No 11
>1gci_A Subtilisin; hydrolase, serine protease; 0.78A {Bacillus lentus} SCOP: c.41.1.1 PDB: 1jea_A 1ndq_A 1svn_A 1tk2_A* 3bx1_A 1ah2_A 1iav_A* 1c9m_A* 1wsd_A 1mpt_A 1ndu_A 1c9j_A 1q5p_A* 1st3_A 1c9n_A*
Probab=100.00 E-value=1.9e-51 Score=431.93 Aligned_cols=262 Identities=34% Similarity=0.483 Sum_probs=219.2
Q ss_pred cCCccc--CCCccCCCCCCCcEEEEEecCCCCCCCCccCCCCCCCCCcceeeeecccccCcccCCceeeeeeeccccccc
Q 004278 117 LGLRNQ--QGLWSESDYGSDVIIGVFDTGIWPERRSFSDLNIGSIPSKWKGVCQVGVKFTAKNCNKKIIGARFFSKGHEA 194 (764)
Q Consensus 117 ~g~~~~--~~~~~~~~~G~gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~g~~~ 194 (764)
|++..+ ..+|..+++|+||+|+|||||| .+||+|+ +...++|..+
T Consensus 6 W~l~~i~~~~a~~~g~~G~gv~VaViDtGi-~~h~~l~-----------------------------~~~~~~~~~~--- 52 (269)
T 1gci_A 6 WGISRVQAPAAHNRGLTGSGVKVAVLDTGI-STHPDLN-----------------------------IRGGASFVPG--- 52 (269)
T ss_dssp HHHHHTTHHHHHHTTCSCTTCEEEEEESCC-CCCTTCC-----------------------------EEEEEECSTT---
T ss_pred cChhhcCcHHHHhcCCCCCCCEEEEECCCC-CCCHhhc-----------------------------ccCCcccCCC---
Confidence 445433 4689999999999999999999 8999994 1222333321
Q ss_pred cCCCCCCCCCCCCCccccCCCCCCCCChhhhHHHhcccCCCCCCccccccceeeeecCCCcEEEEEeecCCCCCCHHHHH
Q 004278 195 AGGSAGPIGGGINETVEFMSPRDADGHGTHTASTAAGRHAFRASMEGYAAGVAKGVAPKARLAVYKVCWKNAGCFDSDIL 274 (764)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~D~~gHGThVAgi~AG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g~~~s~i~ 274 (764)
...+.|..||||||||||+|..+ +. .+.||||+|+|+.+|+++....+..++++
T Consensus 53 -----------------~~~~~d~~gHGT~vAgiia~~~~-~~--------~~~GvAp~a~l~~~~v~~~~g~~~~~~~~ 106 (269)
T 1gci_A 53 -----------------EPSTQDGNGHGTHVAGTIAALNN-SI--------GVLGVAPSAELYAVKVLGASGSGSVSSIA 106 (269)
T ss_dssp -----------------CCSCSCSSSHHHHHHHHHHCCCS-SS--------BCCCSSTTCEEEEEECBCTTSCBCHHHHH
T ss_pred -----------------CCCCCCCCCChHHHHHHHhcCcC-CC--------CcEEeCCCCEEEEEEeECCCCCcCHHHHH
Confidence 12356789999999999999732 11 14799999999999999876346788999
Q ss_pred HHHHHHHhCCCcEEEeccCCCCCCCCCCCCCHHHHHHHHhhcCCcEEEEecCCCCCCCCccccCCCceEEecCCccCCcc
Q 004278 275 AAFDAAVNDGVDVISISIGGGDGISSPYYLDPIAIGSYGAASRGVFVSSSAGNDGPNGMSVTNLAPWIVTVGAGTIDRNF 354 (764)
Q Consensus 275 ~ai~~A~~~gvdVIn~SlG~~~g~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~~p~vitVgAst~d~~~ 354 (764)
+||+||++++++|||||||... ....+..++.++.++|++||+||||+|.....++...|++|+|||.+.
T Consensus 107 ~ai~~a~~~~~~Vin~S~G~~~------~~~~~~~ai~~a~~~gv~vV~AaGN~g~~~~~~Pa~~~~vi~Vga~~~---- 176 (269)
T 1gci_A 107 QGLEWAGNNGMHVANLSLGSPS------PSATLEQAVNSATSRGVLVVAASGNSGAGSISYPARYANAMAVGATDQ---- 176 (269)
T ss_dssp HHHHHHHHTTCSEEEECCCBSS------CCHHHHHHHHHHHHTTCEEEEECCSSCCSSCCBTTTSTTEEEEEEECT----
T ss_pred HHHHHHHHCCCeEEEeCCCCCC------CCHHHHHHHHHHHHCCCEEEEecCCCCCCCCcCCccCCCeEEEEeecC----
Confidence 9999999999999999999872 235677888889999999999999999888888889999999998421
Q ss_pred ceEEEeCCCeEEEeEEeecCCCCCCceeeEEecCCCCccccccccCCCCCCCccceeEEEEecCCCchhhHHHHHHHcCc
Q 004278 355 PAEVRLGDGRRLSGVSLYAGAPLSEKMYPLIYPGKSGVLSASLCMENSLDPNLVRGKIVICDRGSSPRVAKGLVVKKAGG 434 (764)
Q Consensus 355 ~~~~~~~~g~~~~g~~~~~~~~~~~~~~plv~~~~~~~~~~~~C~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga 434 (764)
T Consensus 177 -------------------------------------------------------------------------------- 176 (269)
T 1gci_A 177 -------------------------------------------------------------------------------- 176 (269)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eEEEEeccCCCCCcccHHHHHHHHHcCCCCeEEEEecceeecccCCCeeecccCCCCCCCCCCCCCCcEEcCCCcEEecc
Q 004278 435 VGMILANGISNGEGLVGDAVKAYISSTANPTATIDFKGTILGIKPAPVVASFSARGPNGLNPEILKPDLIAPGVNILAAW 514 (764)
Q Consensus 435 ~g~i~~n~~~~~~~~~~~~~~~y~~~~~~~~~~i~~~~t~~~~~~~~~~a~fSS~Gp~~~~~~~lKPDI~APG~~I~sa~ 514 (764)
.+.++.||++||. |||+|||++|++++
T Consensus 177 ---------------------------------------------~~~~~~~S~~G~~--------~di~APG~~i~s~~ 203 (269)
T 1gci_A 177 ---------------------------------------------NNNRASFSQYGAG--------LDIVAPGVNVQSTY 203 (269)
T ss_dssp ---------------------------------------------TSCBCTTCCCSTT--------EEEEEECSSEEEEE
T ss_pred ---------------------------------------------CCCCCCCCCCCCC--------cceEecCCCeEeec
Confidence 1257899999996 69999999999998
Q ss_pred cCCCCCCCCCCCCccceeEEeccccchhhhHHHHHHHHhhhCCCCCHHHHHHHHHhccccccCCCCCCCccCCCCCCCCC
Q 004278 515 TEAVGPTGLDSDLRKTEFNILSGTSMACPHVSGAAALLKSAHPDWSPAAIRSAMMTTASIVDNSNQPMTDEATGNASTPY 594 (764)
Q Consensus 515 ~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAGvaALl~~~~P~~sp~~ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~ 594 (764)
+.+ .|..++|||||||||||++|||+|++|+|++.|||++|++||+++. .+.
T Consensus 204 ~~~-------------~~~~~sGTS~AaP~vaG~aAll~~~~p~~t~~~v~~~L~~tA~~~g---------------~~~ 255 (269)
T 1gci_A 204 PGS-------------TYASLNGTSMATPHVAGAAALVKQKNPSWSNVQIRNHLKNTATSLG---------------STN 255 (269)
T ss_dssp TTT-------------EEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHTSBCCS---------------CHH
T ss_pred CCC-------------CEEEcCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccCC---------------CCC
Confidence 765 8999999999999999999999999999999999999999999762 245
Q ss_pred CCCCCcccccccCC
Q 004278 595 DFGAGHVNLDRAMD 608 (764)
Q Consensus 595 ~~G~G~vn~~~Al~ 608 (764)
.||+|+||+.+|++
T Consensus 256 ~~G~G~vn~~~A~~ 269 (269)
T 1gci_A 256 LYGSGLVNAEAATR 269 (269)
T ss_dssp HHTTCBCCHHHHTC
T ss_pred CcccCccCHHHHcC
Confidence 89999999999985
No 12
>1r0r_E Subtilisin carlsberg; high resolution, serine protease, protein inhibitor, hydrolase; 1.10A {Bacillus licheniformis} SCOP: c.41.1.1 PDB: 1af4_A* 1be8_A* 1bfk_A 1bfu_A 1be6_A 1oyv_A 1cse_E 1sbc_A 1sca_A 1scb_A 1scd_A 2sec_E 2wuv_A 2wuw_E 1yu6_A 1scn_E* 1c3l_A 1avt_A* 1av7_A* 1sel_A ...
Probab=100.00 E-value=1.7e-51 Score=433.90 Aligned_cols=263 Identities=32% Similarity=0.498 Sum_probs=217.5
Q ss_pred cCCccc--CCCccCCCCCCCcEEEEEecCCCCCCCCccCCCCCCCCCcceeeeecccccCcccCCceeeeeeeccccccc
Q 004278 117 LGLRNQ--QGLWSESDYGSDVIIGVFDTGIWPERRSFSDLNIGSIPSKWKGVCQVGVKFTAKNCNKKIIGARFFSKGHEA 194 (764)
Q Consensus 117 ~g~~~~--~~~~~~~~~G~gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~g~~~ 194 (764)
|+++.+ ..+|..+++|+||+|+|||||||++||+|+ +...++|..+
T Consensus 6 w~l~~i~~~~~~~~g~~G~gv~VaViDtGid~~h~~l~-----------------------------~~~g~~~~~~--- 53 (274)
T 1r0r_E 6 YGIPLIKADKVQAQGFKGANVKVAVLDTGIQASHPDLN-----------------------------VVGGASFVAG--- 53 (274)
T ss_dssp THHHHTTHHHHHHHTCSCTTCEEEEEESCCCTTCTTCC-----------------------------EEEEEECSTT---
T ss_pred CchhhcCCHHHHhcCCCCCCCEEEEEcCCCCCCCHhHc-----------------------------CCCCccccCC---
Confidence 444433 468999999999999999999999999994 1222333321
Q ss_pred cCCCCCCCCCCCCCccccCCCCCCCCChhhhHHHhcccCCCCCCccccccceeeeecCCCcEEEEEeecCCCCCCHHHHH
Q 004278 195 AGGSAGPIGGGINETVEFMSPRDADGHGTHTASTAAGRHAFRASMEGYAAGVAKGVAPKARLAVYKVCWKNAGCFDSDIL 274 (764)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~D~~gHGThVAgi~AG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g~~~s~i~ 274 (764)
...+.|..||||||||||+|..+ +. .+.||||+|+|+.+|+++..+.+..++++
T Consensus 54 -----------------~~~~~d~~gHGT~vAgiia~~~~-~~--------g~~GvAp~a~l~~~~v~~~~g~~~~~~i~ 107 (274)
T 1r0r_E 54 -----------------EAYNTDGNGHGTHVAGTVAALDN-TT--------GVLGVAPSVSLYAVKVLNSSGSGSYSGIV 107 (274)
T ss_dssp -----------------CCTTCCSSSHHHHHHHHHHCCSS-SS--------BCCCSSTTSEEEEEECSCTTSEECHHHHH
T ss_pred -----------------CCCCCCCCCCHHHHHHHHHccCC-CC--------ceEEECCCCEEEEEEEECCCCCccHHHHH
Confidence 02246789999999999999732 11 14799999999999999876236788999
Q ss_pred HHHHHHHhCCCcEEEeccCCCCCCCCCCCCCHHHHHHHHhhcCCcEEEEecCCCCCCC----CccccCCCceEEecCCcc
Q 004278 275 AAFDAAVNDGVDVISISIGGGDGISSPYYLDPIAIGSYGAASRGVFVSSSAGNDGPNG----MSVTNLAPWIVTVGAGTI 350 (764)
Q Consensus 275 ~ai~~A~~~gvdVIn~SlG~~~g~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~----~~~~~~~p~vitVgAst~ 350 (764)
+||+||++++++|||||||... ..+.+..++.++.++|++||+||||+|... ..++...|++|+|||.+.
T Consensus 108 ~ai~~a~~~~~~Vin~S~G~~~------~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~Pa~~~~vi~Vga~~~ 181 (274)
T 1r0r_E 108 SGIEWATTNGMDVINMSLGGAS------GSTAMKQAVDNAYARGVVVVAAAGNSGNSGSTNTIGYPAKYDSVIAVGAVDS 181 (274)
T ss_dssp HHHHHHHHTTCSEEEECEEBSS------CCHHHHHHHHHHHHTTCEEEEECCSCCCCTTCCCCCBTTTSTTSEEEEEECT
T ss_pred HHHHHHHHcCCCEEEeCCCCCC------CcHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCccccCCCCCCcEEEEEEecC
Confidence 9999999999999999999872 245678888899999999999999999763 345677889999998421
Q ss_pred CCccceEEEeCCCeEEEeEEeecCCCCCCceeeEEecCCCCccccccccCCCCCCCccceeEEEEecCCCchhhHHHHHH
Q 004278 351 DRNFPAEVRLGDGRRLSGVSLYAGAPLSEKMYPLIYPGKSGVLSASLCMENSLDPNLVRGKIVICDRGSSPRVAKGLVVK 430 (764)
Q Consensus 351 d~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~plv~~~~~~~~~~~~C~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~ 430 (764)
T Consensus 182 -------------------------------------------------------------------------------- 181 (274)
T 1r0r_E 182 -------------------------------------------------------------------------------- 181 (274)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HcCceEEEEeccCCCCCcccHHHHHHHHHcCCCCeEEEEecceeecccCCCeeecccCCCCCCCCCCCCCCcEEcCCCcE
Q 004278 431 KAGGVGMILANGISNGEGLVGDAVKAYISSTANPTATIDFKGTILGIKPAPVVASFSARGPNGLNPEILKPDLIAPGVNI 510 (764)
Q Consensus 431 ~~Ga~g~i~~n~~~~~~~~~~~~~~~y~~~~~~~~~~i~~~~t~~~~~~~~~~a~fSS~Gp~~~~~~~lKPDI~APG~~I 510 (764)
.+.++.||++||. |||+|||++|
T Consensus 182 -------------------------------------------------~~~~~~~S~~G~~--------~di~APG~~i 204 (274)
T 1r0r_E 182 -------------------------------------------------NSNRASFSSVGAE--------LEVMAPGAGV 204 (274)
T ss_dssp -------------------------------------------------TSCBCTTCCCSTT--------EEEEEECSSE
T ss_pred -------------------------------------------------CCCcCccCCCCCC--------ceEEeCCCCe
Confidence 1257899999985 6999999999
Q ss_pred EecccCCCCCCCCCCCCccceeEEeccccchhhhHHHHHHHHhhhCCCCCHHHHHHHHHhccccccCCCCCCCccCCCCC
Q 004278 511 LAAWTEAVGPTGLDSDLRKTEFNILSGTSMACPHVSGAAALLKSAHPDWSPAAIRSAMMTTASIVDNSNQPMTDEATGNA 590 (764)
Q Consensus 511 ~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAGvaALl~~~~P~~sp~~ik~~L~~TA~~~~~~~~~~~~~~~~~~ 590 (764)
+++++.+ .|..++|||||||||||++|||+|++|+|+++|||++|++||+++.
T Consensus 205 ~s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~g-------------- 257 (274)
T 1r0r_E 205 YSTYPTN-------------TYATLNGTSMASPHVAGAAALILSKHPNLSASQVRNRLSSTATYLG-------------- 257 (274)
T ss_dssp EEEETTT-------------EEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTCBCCS--------------
T ss_pred EeecCCC-------------CEEEeccHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhCcccC--------------
Confidence 9998765 8999999999999999999999999999999999999999999762
Q ss_pred CCCCCCCCCcccccccCC
Q 004278 591 STPYDFGAGHVNLDRAMD 608 (764)
Q Consensus 591 ~~~~~~G~G~vn~~~Al~ 608 (764)
.+..||+|+||+.+|++
T Consensus 258 -~~~~~G~G~~~~~~A~~ 274 (274)
T 1r0r_E 258 -SSFYYGKGLINVEAAAQ 274 (274)
T ss_dssp -CHHHHTTCBCCHHHHTC
T ss_pred -CCCCcccCccCHHHHhC
Confidence 34589999999999985
No 13
>4h6x_A Thiazoline oxidase/subtilisin-like protease; hydrolase; 2.00A {Prochloron didemni} PDB: 4aks_A 4akt_A
Probab=100.00 E-value=5.9e-53 Score=461.57 Aligned_cols=308 Identities=22% Similarity=0.232 Sum_probs=198.4
Q ss_pred CCCccCCCCCCCcEEEEEecCCCCCCCCccCCCCCCCCCcceeeeecccccCcccCCceeeeeeeccccccccCCCCCCC
Q 004278 123 QGLWSESDYGSDVIIGVFDTGIWPERRSFSDLNIGSIPSKWKGVCQVGVKFTAKNCNKKIIGARFFSKGHEAAGGSAGPI 202 (764)
Q Consensus 123 ~~~~~~~~~G~gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~g~~~~~~~~~~~ 202 (764)
..+|.++..|++|+|||||||||++||+|++....+....|+..++....... ..+..+.. . ...++.......
T Consensus 21 ~~~w~~~~g~~~V~VaViDtGiD~~Hpdf~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~-~~~~~~~~~~~~--- 94 (357)
T 4h6x_A 21 ADLHNQTLGDPQITIVIIDGDPDYTLSCFEGAEVSKVFPYWHEPAEPITPEDY-AAFQSIRD-Q-GLKGKEKEEALE--- 94 (357)
T ss_dssp HHHHHHCSCCTTSEEEEEESCCCTTSGGGTTCEEEECCCTTSCCCCCCCHHHH-HHHHHHHH-H-TCCSHHHHHHHH---
T ss_pred HHHHHhcCCCCCCEEEEEcCCCCCCChhHcCCCcccccccccccccccCcccc-cccccccC-c-cccccccccccc---
Confidence 46899999899999999999999999999987666677777766543211000 00000000 0 000000000000
Q ss_pred CCCCCCccccCCCCCCCCChhhhHHHhcccCCCCCCccccccceeeeecCCCcEEEEEeecCCCC-----CCHHHHHHHH
Q 004278 203 GGGINETVEFMSPRDADGHGTHTASTAAGRHAFRASMEGYAAGVAKGVAPKARLAVYKVCWKNAG-----CFDSDILAAF 277 (764)
Q Consensus 203 ~~~~~~~~~~~~~~D~~gHGThVAgi~AG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g-----~~~s~i~~ai 277 (764)
....+..++.|.+||||||||||||+.+++ +.||||+|+|+.+|++....+ +...++++||
T Consensus 95 ----~~~~~~~~~~D~~gHGThVAGiiag~~~~g----------~~GvAp~a~l~~~k~~~~~~~~~~~~~~~~~~~~ai 160 (357)
T 4h6x_A 95 ----AVIPDTKDRIVLNDHACHVTSTIVGQEHSP----------VFGIAPNCRVINMPQDAVIRGNYDDVMSPLNLARAI 160 (357)
T ss_dssp ----HHCTTTHHHHHHHHHHHHHHHHHHCCTTSS----------CCCSCTTSEEEEEECTTC----------CHHHHHHH
T ss_pred ----cccCCCCCCcCCCCcHHHHHHHHhccCCCC----------ceEeeccceEEeeeecccCCCCccccccHHHHHHHH
Confidence 000111234567899999999999975332 479999999999999754311 3455788999
Q ss_pred HHHHhCCCcEEEeccCCCCCCCCCCCCCHHHHHHHHhhcCCcEEEEecCCCCCCCCccccCCCceEEecCCccCCccceE
Q 004278 278 DAAVNDGVDVISISIGGGDGISSPYYLDPIAIGSYGAASRGVFVSSSAGNDGPNGMSVTNLAPWIVTVGAGTIDRNFPAE 357 (764)
Q Consensus 278 ~~A~~~gvdVIn~SlG~~~g~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~~p~vitVgAst~d~~~~~~ 357 (764)
++|++.|++|||||||... ......+.+..++.++.++|++||+||||+|.....+++..|++|+|||++.
T Consensus 161 ~~a~~~g~~Vin~S~G~~~--~~~~~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~------- 231 (357)
T 4h6x_A 161 DLALELGANIIHCAFCRPT--QTSEGEEILVQAIKKCQDNNVLIVSPTGNNSNESWCLPAVLPGTLAVGAAKV------- 231 (357)
T ss_dssp HHHHHTTCSEEEEC-------------CHHHHHHHHHHHTTCEEEEECC---------------CEEEEEECT-------
T ss_pred HHHHHcCCCEEeeccccCC--ccccchhHHHHHHHHHhhCCeEEEecccCCCCCcCcCcccCCCCceEEEecc-------
Confidence 9999999999999999863 2334467788888899999999999999999888888889999999998421
Q ss_pred EEeCCCeEEEeEEeecCCCCCCceeeEEecCCCCccccccccCCCCCCCccceeEEEEecCCCchhhHHHHHHHcCceEE
Q 004278 358 VRLGDGRRLSGVSLYAGAPLSEKMYPLIYPGKSGVLSASLCMENSLDPNLVRGKIVICDRGSSPRVAKGLVVKKAGGVGM 437 (764)
Q Consensus 358 ~~~~~g~~~~g~~~~~~~~~~~~~~plv~~~~~~~~~~~~C~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~ 437 (764)
T Consensus 232 -------------------------------------------------------------------------------- 231 (357)
T 4h6x_A 232 -------------------------------------------------------------------------------- 231 (357)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEeccCCCCCcccHHHHHHHHHcCCCCeEEEEecceeecccCCCeeecccCCCCCCCCCCCCCCcEEcCCCcEEecccCC
Q 004278 438 ILANGISNGEGLVGDAVKAYISSTANPTATIDFKGTILGIKPAPVVASFSARGPNGLNPEILKPDLIAPGVNILAAWTEA 517 (764)
Q Consensus 438 i~~n~~~~~~~~~~~~~~~y~~~~~~~~~~i~~~~t~~~~~~~~~~a~fSS~Gp~~~~~~~lKPDI~APG~~I~sa~~~~ 517 (764)
.+.++.|||||+. ..||||+|||++|+++++.+
T Consensus 232 ------------------------------------------~~~~~~fSn~G~~-----~~~~di~APG~~i~s~~~~~ 264 (357)
T 4h6x_A 232 ------------------------------------------DGTPCHFSNWGGN-----NTKEGILAPGEEILGAQPCT 264 (357)
T ss_dssp ------------------------------------------TSSBCTTCC---C-----TTTTEEEEECSSEEECCTTC
T ss_pred ------------------------------------------CCcccccccCCCC-----CCccceeecCCCeEeccCCC
Confidence 1367899999986 34899999999999998765
Q ss_pred CCCCCCCCCCccceeEEeccccchhhhHHHHHHHHhhh----CCCCCHHHHHHHHHhccccccCCCCCCCccCCCCCCCC
Q 004278 518 VGPTGLDSDLRKTEFNILSGTSMACPHVSGAAALLKSA----HPDWSPAAIRSAMMTTASIVDNSNQPMTDEATGNASTP 593 (764)
Q Consensus 518 ~~~~~~~~~~~~~~y~~~sGTSmAaP~VAGvaALl~~~----~P~~sp~~ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~ 593 (764)
. .|..++|||||||||||++|||+++ +|.|+++|||++|++||++++.. ....+
T Consensus 265 ~------------~~~~~sGTS~AaP~vaG~~All~s~~~~~~~~lt~~~v~~~L~~tA~~~~~~----------~~~~~ 322 (357)
T 4h6x_A 265 E------------EPVRLTGTSMAAPVMTGISALLMSLQVQQGKPVDAEAVRTALLKTAIPCDPE----------VVEEP 322 (357)
T ss_dssp S------------CCEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHC----------------------
T ss_pred C------------cccccCcHHHHHHHHHHHHHHHHHhhHhhCCCCCHHHHHHHHHhhCccCCCC----------CCCCc
Confidence 2 5778999999999999999999954 66899999999999999987431 22345
Q ss_pred CCCCCCcccccccCC
Q 004278 594 YDFGAGHVNLDRAMD 608 (764)
Q Consensus 594 ~~~G~G~vn~~~Al~ 608 (764)
.+||+|+||+.+|++
T Consensus 323 ~~~G~G~vn~~~A~~ 337 (357)
T 4h6x_A 323 ERCLRGFVNIPGAMK 337 (357)
T ss_dssp --CTTCBCCHHHHHH
T ss_pred ccceeEEecHHHHHH
Confidence 689999999999986
No 14
>1to2_E Subtilisin BPN'; serine protease, hydrolase; HET: CIT 15P; 1.30A {Bacillus amyloliquefaciens} SCOP: c.41.1.1 PDB: 1tm1_E* 1tm3_E* 1tm4_E* 1lw6_E* 1tm7_E* 1tmg_E* 1to1_E* 1tm5_E* 1y1k_E* 1y33_E* 1y34_E* 1y3b_E* 1y3c_E* 1y3d_E* 1y3f_E* 1y48_E* 1y4a_E* 1y4d_E 1sup_A* 1sib_E ...
Probab=100.00 E-value=1.1e-50 Score=429.02 Aligned_cols=265 Identities=32% Similarity=0.487 Sum_probs=218.3
Q ss_pred cCCccc--CCCccCCCCCCCcEEEEEecCCCCCCCCccCCCCCCCCCcceeeeecccccCcccCCceeeeeeeccccccc
Q 004278 117 LGLRNQ--QGLWSESDYGSDVIIGVFDTGIWPERRSFSDLNIGSIPSKWKGVCQVGVKFTAKNCNKKIIGARFFSKGHEA 194 (764)
Q Consensus 117 ~g~~~~--~~~~~~~~~G~gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~g~~~ 194 (764)
|++..+ ..+|..+++|+||+|+|||||||++||+|+. ...+.|..+
T Consensus 6 w~l~~i~~~~~~~~g~~G~gv~VaViDtGid~~h~~l~~-----------------------------~~g~~~~~~--- 53 (281)
T 1to2_E 6 YGVSQIKAPALHSQGYTGSNVKVAVIDSGIDSSHPDLKV-----------------------------AGGASMVPS--- 53 (281)
T ss_dssp HHHHHTTHHHHHHHTCSCTTCEEEEEESCCCTTCTTCCE-----------------------------EEEEECCTT---
T ss_pred cchhhcChHHHHhcCCCCCCCEEEEEcCCCCCCCHHHcC-----------------------------cCCccccCC---
Confidence 455433 4589999999999999999999999999941 122222221
Q ss_pred cCCCCCCCCCCCCCccccCCCCCCCCChhhhHHHhcccCCCCCCccccccceeeeecCCCcEEEEEeecCCCCCCHHHHH
Q 004278 195 AGGSAGPIGGGINETVEFMSPRDADGHGTHTASTAAGRHAFRASMEGYAAGVAKGVAPKARLAVYKVCWKNAGCFDSDIL 274 (764)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~D~~gHGThVAgi~AG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g~~~s~i~ 274 (764)
+.....|..||||||||||+|..+ +. .+.||||+|+|+.+|+++..+.+..++++
T Consensus 54 ----------------~~~~~~d~~gHGT~vAgiia~~~~-~~--------g~~GvAp~a~l~~~kv~~~~g~~~~~~i~ 108 (281)
T 1to2_E 54 ----------------ETNPFQDNNSHGTHVAGTVAALNN-SI--------GVLGVAPSASLYAVKVLGADGSGQYSWII 108 (281)
T ss_dssp ----------------CCCTTCCSSSHHHHHHHHHHCCSS-SS--------SBCCSSTTSEEEEEECSCTTSEECHHHHH
T ss_pred ----------------CCCCCCCCCCcHHHHHHHHhccCC-CC--------cceeeCCCCEEEEEEEeCCCCCccHHHHH
Confidence 001236789999999999999732 11 14799999999999999876236788999
Q ss_pred HHHHHHHhCCCcEEEeccCCCCCCCCCCCCCHHHHHHHHhhcCCcEEEEecCCCCCCC----CccccCCCceEEecCCcc
Q 004278 275 AAFDAAVNDGVDVISISIGGGDGISSPYYLDPIAIGSYGAASRGVFVSSSAGNDGPNG----MSVTNLAPWIVTVGAGTI 350 (764)
Q Consensus 275 ~ai~~A~~~gvdVIn~SlG~~~g~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~----~~~~~~~p~vitVgAst~ 350 (764)
++|+||++++++|||||||... ....+..++.++.++|++||+||||+|... ..++...|++|+|||...
T Consensus 109 ~ai~~a~~~~~~Vin~S~G~~~------~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~Pa~~~~vi~Vga~~~ 182 (281)
T 1to2_E 109 NGIEWAIANNMDVINMSLGGPS------GSAALKAAVDKAVASGVVVVAAAGNEGTSGSSSTVGYPGKYPSVIAVGAVDS 182 (281)
T ss_dssp HHHHHHHHTTCSEEEECEEBSC------CCHHHHHHHHHHHHTTCEEEEECCSCCCCTTSCCCCBTTTSTTSEEEEEECT
T ss_pred HHHHHHHHCCCcEEEECCcCCC------CCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCccccCcCCCCEEEEEEecC
Confidence 9999999999999999999872 245778888889999999999999999763 456777899999998321
Q ss_pred CCccceEEEeCCCeEEEeEEeecCCCCCCceeeEEecCCCCccccccccCCCCCCCccceeEEEEecCCCchhhHHHHHH
Q 004278 351 DRNFPAEVRLGDGRRLSGVSLYAGAPLSEKMYPLIYPGKSGVLSASLCMENSLDPNLVRGKIVICDRGSSPRVAKGLVVK 430 (764)
Q Consensus 351 d~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~plv~~~~~~~~~~~~C~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~ 430 (764)
T Consensus 183 -------------------------------------------------------------------------------- 182 (281)
T 1to2_E 183 -------------------------------------------------------------------------------- 182 (281)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HcCceEEEEeccCCCCCcccHHHHHHHHHcCCCCeEEEEecceeecccCCCeeecccCCCCCCCCCCCCCCcEEcCCCcE
Q 004278 431 KAGGVGMILANGISNGEGLVGDAVKAYISSTANPTATIDFKGTILGIKPAPVVASFSARGPNGLNPEILKPDLIAPGVNI 510 (764)
Q Consensus 431 ~~Ga~g~i~~n~~~~~~~~~~~~~~~y~~~~~~~~~~i~~~~t~~~~~~~~~~a~fSS~Gp~~~~~~~lKPDI~APG~~I 510 (764)
.+.++.||++||. |||+|||.+|
T Consensus 183 -------------------------------------------------~~~~~~fS~~G~~--------~di~APG~~i 205 (281)
T 1to2_E 183 -------------------------------------------------SNQRASFSSVGPE--------LDVMAPGVSI 205 (281)
T ss_dssp -------------------------------------------------TSCBCTTCCCSTT--------CCEEEECSSE
T ss_pred -------------------------------------------------CCCcCCcCCCCCC--------ceEEecCCCe
Confidence 1257899999995 6999999999
Q ss_pred EecccCCCCCCCCCCCCccceeEEeccccchhhhHHHHHHHHhhhCCCCCHHHHHHHHHhccccccCCCCCCCccCCCCC
Q 004278 511 LAAWTEAVGPTGLDSDLRKTEFNILSGTSMACPHVSGAAALLKSAHPDWSPAAIRSAMMTTASIVDNSNQPMTDEATGNA 590 (764)
Q Consensus 511 ~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAGvaALl~~~~P~~sp~~ik~~L~~TA~~~~~~~~~~~~~~~~~~ 590 (764)
+++++.+ .|..++|||||||||||++|||+|++|+|+++|||++|++||+++.
T Consensus 206 ~s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~g-------------- 258 (281)
T 1to2_E 206 QSTLPGN-------------KYGAYNGTSMASPHVAGAAALILSKHPNWTNTQVRSSLENTTTKLG-------------- 258 (281)
T ss_dssp EEEETTT-------------EEEEECBHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHTTCBCCS--------------
T ss_pred EeecCCC-------------CEEecCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHhhCcccC--------------
Confidence 9998765 8999999999999999999999999999999999999999999762
Q ss_pred CCCCCCCCCcccccccCCC
Q 004278 591 STPYDFGAGHVNLDRAMDP 609 (764)
Q Consensus 591 ~~~~~~G~G~vn~~~Al~~ 609 (764)
+++.||+|+||+.+|+++
T Consensus 259 -~~~~~G~G~v~~~~a~~~ 276 (281)
T 1to2_E 259 -DSFYYGKGLINVQAAAQH 276 (281)
T ss_dssp -CHHHHTTCBCCHHHHTSS
T ss_pred -CCCCcccceecHHHHhhh
Confidence 345899999999999985
No 15
>1thm_A Thermitase; hydrolase(serine protease); 1.37A {Thermoactinomyces vulgaris} SCOP: c.41.1.1 PDB: 2tec_E 1tec_E 3tec_E
Probab=100.00 E-value=6e-50 Score=423.13 Aligned_cols=258 Identities=29% Similarity=0.402 Sum_probs=217.4
Q ss_pred CCCccCCCCCCCcEEEEEecCCCCCCCCccCCCCCCCCCcceeeeecccccCcccCCceeeeeeeccccccccCCCCCCC
Q 004278 123 QGLWSESDYGSDVIIGVFDTGIWPERRSFSDLNIGSIPSKWKGVCQVGVKFTAKNCNKKIIGARFFSKGHEAAGGSAGPI 202 (764)
Q Consensus 123 ~~~~~~~~~G~gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~g~~~~~~~~~~~ 202 (764)
..+|+.. +|+||+|+|||||||++||+|.++ ++..++|.++
T Consensus 21 ~~aw~~~-~G~gv~VaViDtGvd~~h~~l~~~---------------------------~~~~~~~~~~----------- 61 (279)
T 1thm_A 21 PQAWDIA-EGSGAKIAIVDTGVQSNHPDLAGK---------------------------VVGGWDFVDN----------- 61 (279)
T ss_dssp HHHHTTC-CCTTCEEEEEESCCCTTCTTTTTT---------------------------EEEEEETTTT-----------
T ss_pred HHHHhcC-CCCCCEEEEEccCCCCCCcchhcC---------------------------ccccccccCC-----------
Confidence 4588887 699999999999999999999742 3334444431
Q ss_pred CCCCCCccccCCCCCCCCChhhhHHHhcccCCCCCCccccccceeeeecCCCcEEEEEeecCCCCCCHHHHHHHHHHHHh
Q 004278 203 GGGINETVEFMSPRDADGHGTHTASTAAGRHAFRASMEGYAAGVAKGVAPKARLAVYKVCWKNAGCFDSDILAAFDAAVN 282 (764)
Q Consensus 203 ~~~~~~~~~~~~~~D~~gHGThVAgi~AG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g~~~s~i~~ai~~A~~ 282 (764)
...+.|..||||||||||+|...++.+ +.||||+|+|+.+|+++..+.++.+++++||+||++
T Consensus 62 ---------~~~~~d~~gHGT~vAgiia~~~~n~~g--------~~GvAp~a~l~~~~v~~~~g~~~~~~~~~ai~~a~~ 124 (279)
T 1thm_A 62 ---------DSTPQNGNGHGTHCAGIAAAVTNNSTG--------IAGTAPKASILAVRVLDNSGSGTWTAVANGITYAAD 124 (279)
T ss_dssp ---------BSCCCCSSSHHHHHHHHHHCCCSSSSS--------CCCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHH
T ss_pred ---------CCCCCCCCCcHHHHHHHHhCccCCCCc--------cEEeCCCCEEEEEEeeCCCCCccHHHHHHHHHHHHH
Confidence 124577899999999999998654432 479999999999999987734788899999999999
Q ss_pred CCCcEEEeccCCCCCCCCCCCCCHHHHHHHHhhcCCcEEEEecCCCCCCCCccccCCCceEEecCCccCCccceEEEeCC
Q 004278 283 DGVDVISISIGGGDGISSPYYLDPIAIGSYGAASRGVFVSSSAGNDGPNGMSVTNLAPWIVTVGAGTIDRNFPAEVRLGD 362 (764)
Q Consensus 283 ~gvdVIn~SlG~~~g~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~~p~vitVgAst~d~~~~~~~~~~~ 362 (764)
+|++|||||||... ..+.+..++.++.++|+++|+||||+|.....++...|++|+|||++.
T Consensus 125 ~g~~Vin~S~G~~~------~~~~l~~ai~~a~~~gvlvV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~------------ 186 (279)
T 1thm_A 125 QGAKVISLSLGGTV------GNSGLQQAVNYAWNKGSVVVAAAGNAGNTAPNYPAYYSNAIAVASTDQ------------ 186 (279)
T ss_dssp TTCSEEEECCCBSS------CCHHHHHHHHHHHHTTCEEEEECCSSSSCCCCBTTTSTTEEEEEEECT------------
T ss_pred CCCCEEEEecCCCC------CCHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCcccCCCeEEEEEeCC------------
Confidence 99999999999872 245678888899999999999999999888888888999999998421
Q ss_pred CeEEEeEEeecCCCCCCceeeEEecCCCCccccccccCCCCCCCccceeEEEEecCCCchhhHHHHHHHcCceEEEEecc
Q 004278 363 GRRLSGVSLYAGAPLSEKMYPLIYPGKSGVLSASLCMENSLDPNLVRGKIVICDRGSSPRVAKGLVVKKAGGVGMILANG 442 (764)
Q Consensus 363 g~~~~g~~~~~~~~~~~~~~plv~~~~~~~~~~~~C~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~i~~n~ 442 (764)
T Consensus 187 -------------------------------------------------------------------------------- 186 (279)
T 1thm_A 187 -------------------------------------------------------------------------------- 186 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCcccHHHHHHHHHcCCCCeEEEEecceeecccCCCeeecccCCCCCCCCCCCCCCcEEcCCCcEEecccCCCCCCC
Q 004278 443 ISNGEGLVGDAVKAYISSTANPTATIDFKGTILGIKPAPVVASFSARGPNGLNPEILKPDLIAPGVNILAAWTEAVGPTG 522 (764)
Q Consensus 443 ~~~~~~~~~~~~~~y~~~~~~~~~~i~~~~t~~~~~~~~~~a~fSS~Gp~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~ 522 (764)
.+.++.||++||. |||+|||++|+++++.+
T Consensus 187 -------------------------------------~~~~~~fS~~G~~--------~dv~APG~~i~s~~~~~----- 216 (279)
T 1thm_A 187 -------------------------------------NDNKSSFSTYGSW--------VDVAAPGSSIYSTYPTS----- 216 (279)
T ss_dssp -------------------------------------TSCBCTTCCCCTT--------CCEEEECSSEEEEETTT-----
T ss_pred -------------------------------------CCCcCCcCCCCCc--------eEEEEcCCCeEEEeCCC-----
Confidence 1257899999985 69999999999998765
Q ss_pred CCCCCccceeEEeccccchhhhHHHHHHHHhhhCCCCCHHHHHHHHHhccccccCCCCCCCccCCCCCCCCCCCCCCccc
Q 004278 523 LDSDLRKTEFNILSGTSMACPHVSGAAALLKSAHPDWSPAAIRSAMMTTASIVDNSNQPMTDEATGNASTPYDFGAGHVN 602 (764)
Q Consensus 523 ~~~~~~~~~y~~~sGTSmAaP~VAGvaALl~~~~P~~sp~~ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~G~G~vn 602 (764)
.|..++|||||||||||++||| ++|.+++++||++|++||+++...+ ..||+|+||
T Consensus 217 --------~~~~~sGTS~AaP~VaG~aAll--~~p~~t~~~v~~~L~~ta~~~~~~~--------------~~~G~G~vn 272 (279)
T 1thm_A 217 --------TYASLSGTSMATPHVAGVAGLL--ASQGRSASNIRAAIENTADKISGTG--------------TYWAKGRVN 272 (279)
T ss_dssp --------EEEEECSHHHHHHHHHHHHHHH--HTTTCCHHHHHHHHHHTCBCCTTBT--------------TTBSSEECC
T ss_pred --------CEEEcccHHHHHHHHHHHHHHH--HCCCcCHHHHHHHHHHhCccCCCCC--------------ccccCCeeC
Confidence 8999999999999999999999 5899999999999999999874321 479999999
Q ss_pred ccccCC
Q 004278 603 LDRAMD 608 (764)
Q Consensus 603 ~~~Al~ 608 (764)
+.+|++
T Consensus 273 ~~~A~~ 278 (279)
T 1thm_A 273 AYKAVQ 278 (279)
T ss_dssp HHHHHH
T ss_pred HHHHhc
Confidence 999975
No 16
>2x8j_A Intracellular subtilisin protease; hydrolase, serine protease, intracellular proteinase regulat; HET: CSX 1PE; 1.56A {Bacillus clausii} PDB: 2wv7_A 2wwt_A 2xrm_A*
Probab=100.00 E-value=5.8e-51 Score=440.25 Aligned_cols=271 Identities=29% Similarity=0.403 Sum_probs=217.4
Q ss_pred ccCCccc--CCCccCCCCCCCcEEEEEecCCCCCCCCccCCCCCCCCCcceeeeecccccCcccCCceeeeeeecccccc
Q 004278 116 FLGLRNQ--QGLWSESDYGSDVIIGVFDTGIWPERRSFSDLNIGSIPSKWKGVCQVGVKFTAKNCNKKIIGARFFSKGHE 193 (764)
Q Consensus 116 ~~g~~~~--~~~~~~~~~G~gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~g~~ 193 (764)
.|+++.+ ..+|..+++|+||+|||||||||++||+|.+ +++..++|...+.
T Consensus 22 ~w~l~~i~~~~aw~~~~~G~gv~VaViDtGid~~Hp~l~~---------------------------~~~~~~~~~~~~~ 74 (327)
T 2x8j_A 22 PMGVEIVEAPAVWRASAKGAGQIIGVIDTGCQVDHPDLAE---------------------------RIIGGVNLTTDYG 74 (327)
T ss_dssp CHHHHHTTHHHHHHHHGGGTTCEEEEEESCCCTTCTTTGG---------------------------GEEEEEECSSGGG
T ss_pred CcchhhcChHHHHhcCCCCCCCEEEEEcCCCCCCChhHhh---------------------------cccCCccccCCCC
Confidence 3555433 4689999999999999999999999999964 2444455544321
Q ss_pred ccCCCCCCCCCCCCCccccCCCCCCCCChhhhHHHhcccCCCCCCccccccceeeeecCCCcEEEEEeecCCCCCCHHHH
Q 004278 194 AAGGSAGPIGGGINETVEFMSPRDADGHGTHTASTAAGRHAFRASMEGYAAGVAKGVAPKARLAVYKVCWKNAGCFDSDI 273 (764)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~D~~gHGThVAgi~AG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g~~~s~i 273 (764)
. +.....|..||||||||||+|+.+ +. .+.||||+|+|+.+|+++..+.+..+++
T Consensus 75 ~----------------~~~~~~d~~gHGT~VAgiia~~~~-~~--------g~~GvAp~a~l~~~kv~~~~g~~~~~~i 129 (327)
T 2x8j_A 75 G----------------DETNFSDNNGHGTHVAGTVAAAET-GS--------GVVGVAPKADLFIIKALSGDGSGEMGWI 129 (327)
T ss_dssp G----------------CTTCCCCSSSHHHHHHHHHHCCCC-SS--------BCCCSSTTCEEEEEECSCTTSEECHHHH
T ss_pred C----------------CCCCCCCCCCchHHHHHHHhccCC-CC--------CcEeeCCCCEEEEEEeECCCCCcCHHHH
Confidence 1 112356889999999999999842 21 1479999999999999987623678899
Q ss_pred HHHHHHHHh------CCCcEEEeccCCCCCCCCCCCCCHHHHHHHHhhcCCcEEEEecCCCCCCC-----CccccCCCce
Q 004278 274 LAAFDAAVN------DGVDVISISIGGGDGISSPYYLDPIAIGSYGAASRGVFVSSSAGNDGPNG-----MSVTNLAPWI 342 (764)
Q Consensus 274 ~~ai~~A~~------~gvdVIn~SlG~~~g~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~-----~~~~~~~p~v 342 (764)
++||+||++ .+++|||||||... ....+..++.++.++|++||+||||+|... ..+++..|++
T Consensus 130 ~~ai~~a~~~~~~~~~~~~Vin~S~G~~~------~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~~Pa~~~~v 203 (327)
T 2x8j_A 130 AKAIRYAVDWRGPKGEQMRIITMSLGGPT------DSEELHDAVKYAVSNNVSVVCAAGNEGDGREDTNEFAYPAAYNEV 203 (327)
T ss_dssp HHHHHHHHHCCCTTSCCCSEEEECEEBSC------CCHHHHHHHHHHHHTTCEEEEECCCT---------TCBTTTSTTS
T ss_pred HHHHHHHHhhcccccCCceEEEECCCcCC------CCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCceeccccCCCE
Confidence 999999999 89999999999872 245678888889999999999999999752 4567788999
Q ss_pred EEecCCccCCccceEEEeCCCeEEEeEEeecCCCCCCceeeEEecCCCCccccccccCCCCCCCccceeEEEEecCCCch
Q 004278 343 VTVGAGTIDRNFPAEVRLGDGRRLSGVSLYAGAPLSEKMYPLIYPGKSGVLSASLCMENSLDPNLVRGKIVICDRGSSPR 422 (764)
Q Consensus 343 itVgAst~d~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~plv~~~~~~~~~~~~C~~~~~~~~~~~gkivl~~~g~~~~ 422 (764)
|+|||++.
T Consensus 204 i~Vga~~~------------------------------------------------------------------------ 211 (327)
T 2x8j_A 204 IAVGAVDF------------------------------------------------------------------------ 211 (327)
T ss_dssp EEEEEECT------------------------------------------------------------------------
T ss_pred EEEEEECC------------------------------------------------------------------------
Confidence 99998421
Q ss_pred hhHHHHHHHcCceEEEEeccCCCCCcccHHHHHHHHHcCCCCeEEEEecceeecccCCCeeecccCCCCCCCCCCCCCCc
Q 004278 423 VAKGLVVKKAGGVGMILANGISNGEGLVGDAVKAYISSTANPTATIDFKGTILGIKPAPVVASFSARGPNGLNPEILKPD 502 (764)
Q Consensus 423 ~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~y~~~~~~~~~~i~~~~t~~~~~~~~~~a~fSS~Gp~~~~~~~lKPD 502 (764)
.+.++.||++||. ||
T Consensus 212 ---------------------------------------------------------~~~~~~fS~~G~~--------~d 226 (327)
T 2x8j_A 212 ---------------------------------------------------------DLRLSDFTNTNEE--------ID 226 (327)
T ss_dssp ---------------------------------------------------------TCCBSCC---CCC--------CS
T ss_pred ---------------------------------------------------------CCCCCCccCCCCC--------ce
Confidence 1257899999984 79
Q ss_pred EEcCCCcEEecccCCCCCCCCCCCCccceeEEeccccchhhhHHHHHHHHhhh-----CCCCCHHHHHHHHHhccccccC
Q 004278 503 LIAPGVNILAAWTEAVGPTGLDSDLRKTEFNILSGTSMACPHVSGAAALLKSA-----HPDWSPAAIRSAMMTTASIVDN 577 (764)
Q Consensus 503 I~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAGvaALl~~~-----~P~~sp~~ik~~L~~TA~~~~~ 577 (764)
|+|||++|+++++.+ .|..++|||||||||||++|||+|+ +|.|++.+||++|++||+++.
T Consensus 227 i~APG~~i~s~~~~~-------------~~~~~sGTS~AaP~VaG~aAll~~~~~~~~~p~ls~~~v~~~L~~tA~~~g- 292 (327)
T 2x8j_A 227 IVAPGVGIKSTYLDS-------------GYAELSGTAMAAPHVAGALALIINLAEDAFKRSLSETEIYAQLVRRATPIG- 292 (327)
T ss_dssp EEEECSSEEEECSTT-------------CEEEEESGGGTHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHTTEECCS-
T ss_pred EecCcCceEeecCCC-------------CEEeecCHHHHHHHHHHHHHHHHHhhhhhcCCCCCHHHHHHHHHHhCccCC-
Confidence 999999999998765 7999999999999999999999999 999999999999999999763
Q ss_pred CCCCCCccCCCCCCCCCCCCCCcccccccCC
Q 004278 578 SNQPMTDEATGNASTPYDFGAGHVNLDRAMD 608 (764)
Q Consensus 578 ~~~~~~~~~~~~~~~~~~~G~G~vn~~~Al~ 608 (764)
.++..||+|+||+.+|++
T Consensus 293 -------------~~~~~~G~G~vd~~~A~~ 310 (327)
T 2x8j_A 293 -------------FTAQAEGNGFLTLDLVER 310 (327)
T ss_dssp -------------SCHHHHTTCEECTTHHHH
T ss_pred -------------CCCCceeeeEECHHHHHH
Confidence 134589999999999987
No 17
>3zxy_A Subtilisin-like protein; hydrolase; 1.58A {Prochloron didemni} PDB: 3zxx_A
Probab=100.00 E-value=7.9e-51 Score=431.15 Aligned_cols=266 Identities=25% Similarity=0.281 Sum_probs=210.1
Q ss_pred CCCC-CCcEEEEEecCCCCCCCCccCCCCCCCCCcceeeeecccccCcccCCceeeeeeeccccccccCCCCCCCCCCCC
Q 004278 129 SDYG-SDVIIGVFDTGIWPERRSFSDLNIGSIPSKWKGVCQVGVKFTAKNCNKKIIGARFFSKGHEAAGGSAGPIGGGIN 207 (764)
Q Consensus 129 ~~~G-~gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~g~~~~~~~~~~~~~~~~ 207 (764)
..+| +||+|||||||||++||+|.+.. +. .+.+..
T Consensus 3 ~l~G~~gV~VaViDtGid~~Hpdl~g~~--------------------------~~-~~~~~~----------------- 38 (282)
T 3zxy_A 3 SLKGDHNIRVAILDGPVDIAHPCFQGAD--------------------------LT-VLPTLA----------------- 38 (282)
T ss_dssp TCCCCTTSEEEEEESCCCTTSGGGTTCE--------------------------EE-ECCCSS-----------------
T ss_pred CCcCCCCCEEEEEcCCCCCCChhHCCCe--------------------------ee-cCcCCC-----------------
Confidence 3568 79999999999999999997531 11 111111
Q ss_pred CccccCCCCCCCCChhhhHHHhcccCCCCCCccccccceeeeecCCCcEEEEEeecCCC-CCCHHHHHHHHHHHHhCCCc
Q 004278 208 ETVEFMSPRDADGHGTHTASTAAGRHAFRASMEGYAAGVAKGVAPKARLAVYKVCWKNA-GCFDSDILAAFDAAVNDGVD 286 (764)
Q Consensus 208 ~~~~~~~~~D~~gHGThVAgi~AG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~-g~~~s~i~~ai~~A~~~gvd 286 (764)
........|.+||||||||||+|+..++ +.||||+|+|+.+|++.+.. ..+..++++||+||++++++
T Consensus 39 -~~~~~~d~~~~gHGT~VAGiiag~~~~~----------~~GvAp~a~l~~~kv~~~~~~~~~~~~i~~ai~~a~~~~~~ 107 (282)
T 3zxy_A 39 -PTAARSDGFMSAHGTHVASIIFGQPETS----------VPGIAPQCRGLIVPIFSDDRRRITQLDLARGIERAVNAGAH 107 (282)
T ss_dssp -CCCCCTTCHHHHHHHHHHHHHHCCTTSS----------SCCSSTTSEEEEEECSCSSSSCCCHHHHHHHHHHHHHTTCS
T ss_pred -CCCCCCCCCCCCcccceeehhhccCCce----------eeeeccccceEeeEeeccccccchHHHHHHHHHHhhccCCe
Confidence 0011222345789999999999975332 47999999999999986542 36777899999999999999
Q ss_pred EEEeccCCCCCCCCCCCCCHHHHHHHHhhcCCcEEEEecCCCCCCCCccccCCCceEEecCCccCCccceEEEeCCCeEE
Q 004278 287 VISISIGGGDGISSPYYLDPIAIGSYGAASRGVFVSSSAGNDGPNGMSVTNLAPWIVTVGAGTIDRNFPAEVRLGDGRRL 366 (764)
Q Consensus 287 VIn~SlG~~~g~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~~p~vitVgAst~d~~~~~~~~~~~g~~~ 366 (764)
|||||||... ........+..++..+.++|+++|+||||+|......+...|++|+|||.+.
T Consensus 108 Vin~S~G~~~--~~~~~~~~~~~ai~~a~~~gi~vV~AaGN~g~~~~~~Pa~~~~vi~Vga~~~---------------- 169 (282)
T 3zxy_A 108 IINISGGELT--DFGEADGWLENAVSLCRQNNVLLVAAAGNNGCDCLHVPAALPAVLAVGAMDD---------------- 169 (282)
T ss_dssp EEEECCCEEE--SSSCCCHHHHHHHHHHHHTTCEEEEECCSSCSSCEEETTTSTTCEEEEEECT----------------
T ss_pred EEeccCcccc--ccccccHHHHHHHHHHhhcCceEEEecccCCCccccCccccceeEEEEEEcC----------------
Confidence 9999999762 2223345677788889999999999999999988888889999999998321
Q ss_pred EeEEeecCCCCCCceeeEEecCCCCccccccccCCCCCCCccceeEEEEecCCCchhhHHHHHHHcCceEEEEeccCCCC
Q 004278 367 SGVSLYAGAPLSEKMYPLIYPGKSGVLSASLCMENSLDPNLVRGKIVICDRGSSPRVAKGLVVKKAGGVGMILANGISNG 446 (764)
Q Consensus 367 ~g~~~~~~~~~~~~~~plv~~~~~~~~~~~~C~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~ 446 (764)
T Consensus 170 -------------------------------------------------------------------------------- 169 (282)
T 3zxy_A 170 -------------------------------------------------------------------------------- 169 (282)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CcccHHHHHHHHHcCCCCeEEEEecceeecccCCCeeecccCCCCCCCCCCCCCCcEEcCCCcEEecccCCCCCCCCCCC
Q 004278 447 EGLVGDAVKAYISSTANPTATIDFKGTILGIKPAPVVASFSARGPNGLNPEILKPDLIAPGVNILAAWTEAVGPTGLDSD 526 (764)
Q Consensus 447 ~~~~~~~~~~y~~~~~~~~~~i~~~~t~~~~~~~~~~a~fSS~Gp~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~ 526 (764)
.+.++.||+||+. ..||||+|||.+|+++++.+
T Consensus 170 ---------------------------------~~~~~~~S~~~~~-----~~~~di~ApG~~i~s~~~~~--------- 202 (282)
T 3zxy_A 170 ---------------------------------HGHPLDFSNWGST-----YEQQGILAPGEDILGAKPGG--------- 202 (282)
T ss_dssp ---------------------------------TSCBCSSSCCCHH-----HHHHEEEEECSSEEEECTTS---------
T ss_pred ---------------------------------CCccccccCCCCC-----ccccceeccCcceeeecCCC---------
Confidence 1357889999975 35899999999999998876
Q ss_pred CccceeEEeccccchhhhHHHHHHHHhhhC----CCCCHHHHHHHHHhccccccCCCCCCCccCCCCCCCCCCCCCCccc
Q 004278 527 LRKTEFNILSGTSMACPHVSGAAALLKSAH----PDWSPAAIRSAMMTTASIVDNSNQPMTDEATGNASTPYDFGAGHVN 602 (764)
Q Consensus 527 ~~~~~y~~~sGTSmAaP~VAGvaALl~~~~----P~~sp~~ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~G~G~vn 602 (764)
.|..++|||||||||||++|||++++ |.++|+|||++|++||++++. ..+.....||+|+||
T Consensus 203 ----~~~~~sGTS~AaP~vaG~aAll~~~~~~~~~~~~~~~vk~~L~~tA~~~~~----------~~~~~~~~~G~G~ln 268 (282)
T 3zxy_A 203 ----GTERLSGTAFATPIVSGVAALLLSEQVRRGETPDPQKVRQLLLQSALPCDD----------DAPEQARRCLAGRLN 268 (282)
T ss_dssp ----CEEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHCBCC-----------------CGGGTTCBCC
T ss_pred ----ceeecCCCcccchHHHHHHHHHHHHhHhhCCCCCHHHHHHHHHhhCeeCCC----------CCCCccCceeeeEeC
Confidence 79999999999999999999999874 789999999999999997743 223445589999999
Q ss_pred ccccCC
Q 004278 603 LDRAMD 608 (764)
Q Consensus 603 ~~~Al~ 608 (764)
+.+|++
T Consensus 269 ~~~A~~ 274 (282)
T 3zxy_A 269 VSGAFT 274 (282)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999985
No 18
>2ixt_A 36KDA protease; serine protease, sphericase, subtilisin like protease, hydrolase; 0.8A {Bacillus sphaericus} SCOP: c.41.1.1 PDB: 3d43_A 1ea7_A* 2gko_A*
Probab=100.00 E-value=2.3e-49 Score=425.80 Aligned_cols=287 Identities=29% Similarity=0.384 Sum_probs=225.8
Q ss_pred cCCcc--cCCCccCCCCCCCcEEEEEecCCCCCCCCccCCCCCCCCCcceeeeecccccCcccCCceeeeeeeccccccc
Q 004278 117 LGLRN--QQGLWSESDYGSDVIIGVFDTGIWPERRSFSDLNIGSIPSKWKGVCQVGVKFTAKNCNKKIIGARFFSKGHEA 194 (764)
Q Consensus 117 ~g~~~--~~~~~~~~~~G~gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~g~~~ 194 (764)
|+++. ...+|..+.+|+||+|+|||||||++||+|.++ +...++|....
T Consensus 8 W~l~~i~~~~~w~~~~~G~gv~VaViDtGvd~~H~~l~~~---------------------------~~~~~~~~~~~-- 58 (310)
T 2ixt_A 8 WGIKAIYNNDTLTSTTGGSGINIAVLDTGVNTSHPDLVNN---------------------------VEQCKDFTGAT-- 58 (310)
T ss_dssp HHHHHHHTCTTCCCCCCCTTCEEEEEESCCCTTCTTTTTT---------------------------EEEEEESSSSS--
T ss_pred CchhhcCchhhhhccCCCCCcEEEEEecCCCCCCHHHhhc---------------------------ccccccccCCC--
Confidence 44443 357999999999999999999999999999742 33334444310
Q ss_pred cCCCCCCCCCCCCCccccCCCCCCCCChhhhHHHhcccCCCCCCccccccceeeeecCCCcEEEEEeecCCCCCCHHHHH
Q 004278 195 AGGSAGPIGGGINETVEFMSPRDADGHGTHTASTAAGRHAFRASMEGYAAGVAKGVAPKARLAVYKVCWKNAGCFDSDIL 274 (764)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~D~~gHGThVAgi~AG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g~~~s~i~ 274 (764)
........|..||||||||||+|....+ ...+.||||+|+|+.+|++++.+.++.++++
T Consensus 59 --------------~~~~~~~~d~~gHGT~vAgiia~~~~~n-------~~g~~GvAp~a~l~~~~v~~~~g~~~~~~~~ 117 (310)
T 2ixt_A 59 --------------TPINNSCTDRNGHGTHVAGTALADGGSD-------QAGIYGVAPDADLWAYKVLLDSGSGYSDDIA 117 (310)
T ss_dssp --------------SCEETCCCCSSSHHHHHHHHHHCBCCTT-------SCSCBCSCTTSEEEEEECSCTTSCCCHHHHH
T ss_pred --------------CCCCCCCCCCCCCHHHHHHHHhccCCCC-------CCceEEECCCCEEEEEEEEcCCCCCcHHHHH
Confidence 0011335678999999999999985221 1124799999999999999877336888999
Q ss_pred HHHHHHHhCCC-----cEEEeccCCCCCCCCCCCCCHHHHHHHHhhcCCcEEEEecCCCCCC--CCccccCCCceEEecC
Q 004278 275 AAFDAAVNDGV-----DVISISIGGGDGISSPYYLDPIAIGSYGAASRGVFVSSSAGNDGPN--GMSVTNLAPWIVTVGA 347 (764)
Q Consensus 275 ~ai~~A~~~gv-----dVIn~SlG~~~g~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~--~~~~~~~~p~vitVgA 347 (764)
+||+||+++++ +|||||||... ....+..++.++.++|++||+||||+|.. ...+++..|++|+|||
T Consensus 118 ~ai~~a~~~~~~~~~~~Vin~S~G~~~------~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~~~Pa~~~~vi~Vga 191 (310)
T 2ixt_A 118 AAIRHAADQATATGTKTIISMSLGSSA------NNSLISSAVNYAYSKGVLIVAAAGNSGYSQGTIGYPGALPNAIAVAA 191 (310)
T ss_dssp HHHHHHHHHHHHHTCCEEEEECCCBSS------CCHHHHHHHHHHHHTTCEEEEECCSCCSSTTCCCBTTTSTTSEEEEE
T ss_pred HHHHHHHHhhhccCCCeEEEEcCCCCC------CCHHHHHHHHHHHhCCcEEEEcCCCCCCCCCCCCCcccCCCeeEEEe
Confidence 99999999988 99999999872 24567788888999999999999999976 3456778899999998
Q ss_pred CccCCccceEEEeCCCeEEEeEEeecCCCCCCceeeEEecCCCCccccccccCCCCCCCccceeEEEEecCCCchhhHHH
Q 004278 348 GTIDRNFPAEVRLGDGRRLSGVSLYAGAPLSEKMYPLIYPGKSGVLSASLCMENSLDPNLVRGKIVICDRGSSPRVAKGL 427 (764)
Q Consensus 348 st~d~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~plv~~~~~~~~~~~~C~~~~~~~~~~~gkivl~~~g~~~~~~~~~ 427 (764)
.+...
T Consensus 192 ~~~~~--------------------------------------------------------------------------- 196 (310)
T 2ixt_A 192 LENVQ--------------------------------------------------------------------------- 196 (310)
T ss_dssp EEEEE---------------------------------------------------------------------------
T ss_pred ccccc---------------------------------------------------------------------------
Confidence 43100
Q ss_pred HHHHcCceEEEEeccCCCCCcccHHHHHHHHHcCCCCeEEEEecceeecccCCC--eeecccCCCCCCCC----CCCCCC
Q 004278 428 VVKKAGGVGMILANGISNGEGLVGDAVKAYISSTANPTATIDFKGTILGIKPAP--VVASFSARGPNGLN----PEILKP 501 (764)
Q Consensus 428 ~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~y~~~~~~~~~~i~~~~t~~~~~~~~--~~a~fSS~Gp~~~~----~~~lKP 501 (764)
..+ .++.||++||.... ....||
T Consensus 197 ---------------------------------------------------~~g~~~~~~~S~~G~~~~~g~~~~~~~~~ 225 (310)
T 2ixt_A 197 ---------------------------------------------------QNGTYRVADYSSRGYISTAGDYVIQEGDI 225 (310)
T ss_dssp ---------------------------------------------------ETTEEEECTTSCCCCTTTTTSSSCCTTCC
T ss_pred ---------------------------------------------------cCCCeeeccccCCCCccCCccccccCCCe
Confidence 001 57889999995321 123599
Q ss_pred cEEcCCCcEEecccCCCCCCCCCCCCccceeEEeccccchhhhHHHHHHHHhhhCCCCCHHHHHHHHHhccccccCCCCC
Q 004278 502 DLIAPGVNILAAWTEAVGPTGLDSDLRKTEFNILSGTSMACPHVSGAAALLKSAHPDWSPAAIRSAMMTTASIVDNSNQP 581 (764)
Q Consensus 502 DI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAGvaALl~~~~P~~sp~~ik~~L~~TA~~~~~~~~~ 581 (764)
||+|||++|+++++.+ .|..++|||||||||||++|||+|++|+|++.+||++|++||++++..+.
T Consensus 226 di~ApG~~i~s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~~~~~- 291 (310)
T 2ixt_A 226 EISAPGSSVYSTWYNG-------------GYNTISGTSMATPHVSGLAAKIWAENPSLSNTQLRSNLQERAKSVDIKGG- 291 (310)
T ss_dssp CEEEECSSEEEECTTS-------------SEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHHHHTSCCCBS-
T ss_pred eEECCCCCEeeecCCC-------------CEEeeccHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHhhCcccCCCCC-
Confidence 9999999999998765 79999999999999999999999999999999999999999998764321
Q ss_pred CCccCCCCCCCCCCCCCCcccc
Q 004278 582 MTDEATGNASTPYDFGAGHVNL 603 (764)
Q Consensus 582 ~~~~~~~~~~~~~~~G~G~vn~ 603 (764)
....++.++.||||++|+
T Consensus 292 ----~~a~~g~d~~~G~G~~~v 309 (310)
T 2ixt_A 292 ----YGAAIGDDYASGFGFARV 309 (310)
T ss_dssp ----TTCCSSSBTTTBTCBCCC
T ss_pred ----cccccCCccccccceeec
Confidence 123567788999999986
No 19
>2z30_A TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 3a3o_A 3a3n_A 2zrq_A 2z57_A 2z56_A 2z58_A 3a3p_A 2z2x_A* 2z2y_A
Probab=100.00 E-value=6.6e-50 Score=431.32 Aligned_cols=271 Identities=29% Similarity=0.395 Sum_probs=219.4
Q ss_pred ccCCccc--CCCccCCCCCC--CcEEEEEecCCCCCCCCccCCCCCCCCCcceeeeecccccCcccCCceeeeeeecccc
Q 004278 116 FLGLRNQ--QGLWSESDYGS--DVIIGVFDTGIWPERRSFSDLNIGSIPSKWKGVCQVGVKFTAKNCNKKIIGARFFSKG 191 (764)
Q Consensus 116 ~~g~~~~--~~~~~~~~~G~--gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~g 191 (764)
.|++..+ ..+|+.+ +|+ ||+|+|||||||++||+|.++ +...++|..+
T Consensus 9 ~W~l~~i~~~~aw~~~-~G~~~gv~VaViDtGid~~Hp~l~~~---------------------------~~~~~~~~~~ 60 (320)
T 2z30_A 9 PWGIERVKAPSVWSIT-DGSVSVIQVAVLDTGVDYDHPDLAAN---------------------------IAWCVSTLRG 60 (320)
T ss_dssp CHHHHHTTCGGGTTTC-CSCCTTCEEEEEESCBCTTCTTTGGG---------------------------EEEEEECGGG
T ss_pred CCChhhcChHHHHHhc-CCCcCCeEEEEECCCCCCCChhHhcc---------------------------cccCccccCC
Confidence 3454433 4689988 899 999999999999999999742 2333333331
Q ss_pred ccccCCCCCCCCCCCCCccccCCCCCCCCChhhhHHHhcccCCCCCCccccccceeeeecCCCcEEEEEeecCCCCCCHH
Q 004278 192 HEAAGGSAGPIGGGINETVEFMSPRDADGHGTHTASTAAGRHAFRASMEGYAAGVAKGVAPKARLAVYKVCWKNAGCFDS 271 (764)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~D~~gHGThVAgi~AG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g~~~s 271 (764)
... .......|..||||||||||+|.. ++. .+.||||+|+|+.+|+++..+.+..+
T Consensus 61 ~~~---------------~~~~~~~d~~gHGT~vAgiia~~~-n~~--------g~~GvAp~a~l~~~~v~~~~g~~~~~ 116 (320)
T 2z30_A 61 KVS---------------TKLRDCADQNGHGTHVIGTIAALN-NDI--------GVVGVAPGVQIYSVRVLDARGSGSYS 116 (320)
T ss_dssp CCB---------------CCHHHHBCSSSHHHHHHHHHHCCS-SSB--------SCCCSSTTCEEEEEECSCTTSEEEHH
T ss_pred ccC---------------CCCCCCCCCCCCHHHHHHHHHccc-CCC--------ceEeeCCCCEEEEEEeeCCCCCccHH
Confidence 100 001123578999999999999973 221 14799999999999999877236788
Q ss_pred HHHHHHHHHHhC--------------------CCcEEEeccCCCCCCCCCCCCCHHHHHHHHhhcCCcEEEEecCCCCCC
Q 004278 272 DILAAFDAAVND--------------------GVDVISISIGGGDGISSPYYLDPIAIGSYGAASRGVFVSSSAGNDGPN 331 (764)
Q Consensus 272 ~i~~ai~~A~~~--------------------gvdVIn~SlG~~~g~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~ 331 (764)
++++||+||+++ +++|||||||... ....+..++.++.++|++||+||||+|..
T Consensus 117 ~i~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~Vin~S~G~~~------~~~~~~~ai~~a~~~gi~vV~AAGN~g~~ 190 (320)
T 2z30_A 117 DIAIGIEQAILGPDGVADKDGDGIIAGDPDDDAAEVISMSLGGPA------DDSYLYDMIIQAYNAGIVIVAASGNEGAP 190 (320)
T ss_dssp HHHHHHHHHHHTTTTCSCTTSSSCCTTCTTSCCCSEEEECEEBSC------CCHHHHHHHHHHHHTTCEEEEECCSSCCS
T ss_pred HHHHHHHHHHhCcccccccccccccccccccCCceEEEecCCCCC------CCHHHHHHHHHHHHCCCEEEEeCCCCCCC
Confidence 999999999987 9999999999872 24567778888999999999999999988
Q ss_pred CCccccCCCceEEecCCccCCccceEEEeCCCeEEEeEEeecCCCCCCceeeEEecCCCCccccccccCCCCCCCcccee
Q 004278 332 GMSVTNLAPWIVTVGAGTIDRNFPAEVRLGDGRRLSGVSLYAGAPLSEKMYPLIYPGKSGVLSASLCMENSLDPNLVRGK 411 (764)
Q Consensus 332 ~~~~~~~~p~vitVgAst~d~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~plv~~~~~~~~~~~~C~~~~~~~~~~~gk 411 (764)
...+++..|++|+|||.+.
T Consensus 191 ~~~~Pa~~~~vi~Vga~~~------------------------------------------------------------- 209 (320)
T 2z30_A 191 SPSYPAAYPEVIAVGAIDS------------------------------------------------------------- 209 (320)
T ss_dssp SCCBTTTSTTEEEEEEECT-------------------------------------------------------------
T ss_pred CCCCcccCCCeEEEEeeCC-------------------------------------------------------------
Confidence 7888889999999999421
Q ss_pred EEEEecCCCchhhHHHHHHHcCceEEEEeccCCCCCcccHHHHHHHHHcCCCCeEEEEecceeecccCCCeeecccCCCC
Q 004278 412 IVICDRGSSPRVAKGLVVKKAGGVGMILANGISNGEGLVGDAVKAYISSTANPTATIDFKGTILGIKPAPVVASFSARGP 491 (764)
Q Consensus 412 ivl~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~y~~~~~~~~~~i~~~~t~~~~~~~~~~a~fSS~Gp 491 (764)
.+.++.||++||
T Consensus 210 --------------------------------------------------------------------~~~~~~~S~~g~ 221 (320)
T 2z30_A 210 --------------------------------------------------------------------NDNIASFSNRQP 221 (320)
T ss_dssp --------------------------------------------------------------------TSCBCTTSCSSC
T ss_pred --------------------------------------------------------------------CCCcCcccCCCC
Confidence 125789999996
Q ss_pred CCCCCCCCCCcEEcCCCcEEecccCCCCCCCCCCCCccceeEEeccccchhhhHHHHHHHHhhhC-------------CC
Q 004278 492 NGLNPEILKPDLIAPGVNILAAWTEAVGPTGLDSDLRKTEFNILSGTSMACPHVSGAAALLKSAH-------------PD 558 (764)
Q Consensus 492 ~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAGvaALl~~~~-------------P~ 558 (764)
+|+|||++|+++++.+ .|..++|||||||||||++|||+|++ |+
T Consensus 222 ----------~v~APG~~i~s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~~~~~~~~~~~~~~~~p~ 278 (320)
T 2z30_A 222 ----------EVSAPGVDILSTYPDD-------------SYETLMGTAMATPHVSGVVALIQAAYYQKYGKILPVGTFDD 278 (320)
T ss_dssp ----------SEEEECSSEEEEETTT-------------EEEEECSHHHHHHHHHHHHHHHHHHHHHHHSSCCCCCCTTC
T ss_pred ----------CEEeCCCCeEEeccCC-------------CeEeccCHHHHHHHHHHHHHHHHHhchhhcccccccccCCC
Confidence 6899999999998765 89999999999999999999999999 99
Q ss_pred CCHHHHHHHHHhccccccCCCCCCCccCCCCCCCCCCCCCCcccccccCC
Q 004278 559 WSPAAIRSAMMTTASIVDNSNQPMTDEATGNASTPYDFGAGHVNLDRAMD 608 (764)
Q Consensus 559 ~sp~~ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~G~G~vn~~~Al~ 608 (764)
|++.+||++|++||+++.. +..+..||+|+||+.+|++
T Consensus 279 lt~~~v~~~L~~ta~~~~~------------~g~~~~~G~G~vd~~~A~~ 316 (320)
T 2z30_A 279 ISKNTVRGILHITADDLGP------------TGWDADYGYGVVRAALAVQ 316 (320)
T ss_dssp CSTTSHHHHHHHHSBCCSS------------SSSBTTTBTCBCCHHHHHH
T ss_pred CCHHHHHHHHHhhCccCCC------------CCCCCCcCCceeCHHHHHH
Confidence 9999999999999998732 2345689999999999986
No 20
>4h6w_A N-terminal cyanobactin protease; hydrolase; 2.45A {Planktothrix agardhii nies-596}
Probab=100.00 E-value=7.7e-50 Score=428.82 Aligned_cols=272 Identities=26% Similarity=0.334 Sum_probs=217.1
Q ss_pred CCCccCCCCCCCcEEEEEecCCCCCCCCccCCCCCCCCCcceeeeecccccCcccCCceeeeeeeccccccccCCCCCCC
Q 004278 123 QGLWSESDYGSDVIIGVFDTGIWPERRSFSDLNIGSIPSKWKGVCQVGVKFTAKNCNKKIIGARFFSKGHEAAGGSAGPI 202 (764)
Q Consensus 123 ~~~~~~~~~G~gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~g~~~~~~~~~~~ 202 (764)
+++|+.+..++||+|||||||||++||+|.+. .+.+..+|..+
T Consensus 11 ~~aW~~~~G~~gV~VaViDtGid~~Hpdl~g~--------------------------~~~~~~~~~~~----------- 53 (306)
T 4h6w_A 11 KKLWSETRGDPKICVAVLDGIVDQNHPCFIGA--------------------------DLTRLPSLVSG----------- 53 (306)
T ss_dssp HHHHHHCSCCTTCEEEEESSCCCTTSGGGTTC--------------------------EEEECC----------------
T ss_pred HHHHhhhCCCCCCEEEEEcCCCCCCChhHcCC--------------------------cccCCCcccCC-----------
Confidence 36899988779999999999999999999753 12222222221
Q ss_pred CCCCCCccccCCCCCCCCChhhhHHHhcccCCCCCCccccccceeeeecCCCcEEEEEeecCCC-CCCHHHHHHHHHHHH
Q 004278 203 GGGINETVEFMSPRDADGHGTHTASTAAGRHAFRASMEGYAAGVAKGVAPKARLAVYKVCWKNA-GCFDSDILAAFDAAV 281 (764)
Q Consensus 203 ~~~~~~~~~~~~~~D~~gHGThVAgi~AG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~-g~~~s~i~~ai~~A~ 281 (764)
+.....|..||||||||||+|+.+. .+.||||+|+|+.+|++.+.. .+...++++||+||+
T Consensus 54 --------~~~~~~d~~gHGThVAGiiag~~~~----------~~~GVAp~a~l~~~kv~~~~~~~~~~~~i~~ai~~a~ 115 (306)
T 4h6w_A 54 --------EANANGSMSTHGTHVASIIFGQHDS----------PVTGIAPQCRGLIVPVFADESLKLSQLDLSRAIEQAV 115 (306)
T ss_dssp -------------CCCCHHHHHHHHHHHCCTTS----------SSCCSSTTSEEEECCCCCSSSCCCCHHHHHHHHHHHH
T ss_pred --------CCCCCCCCCCchHHHHHHHHccccC----------CcceeccccccceeeccccccccchHHHHHHHHHHhh
Confidence 1122346789999999999997532 247999999999999987652 367778999999999
Q ss_pred hCCCcEEEeccCCCCCCCCCCCCCHHHHHHHHhhcCCcEEEEecCCCCCCCCccccCCCceEEecCCccCCccceEEEeC
Q 004278 282 NDGVDVISISIGGGDGISSPYYLDPIAIGSYGAASRGVFVSSSAGNDGPNGMSVTNLAPWIVTVGAGTIDRNFPAEVRLG 361 (764)
Q Consensus 282 ~~gvdVIn~SlG~~~g~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~~p~vitVgAst~d~~~~~~~~~~ 361 (764)
+++++|||+|||... ........+..++..+.++|++||+||||+|.....++...+++|+|||...
T Consensus 116 ~~g~~vi~~s~g~~~--~~~~~~~~~~~ai~~a~~~gi~vvaaagn~g~~~~~~Pa~~~~vi~Vga~~~----------- 182 (306)
T 4h6w_A 116 NNGANIINVSAGQLT--DAGEADTWLEKAIQLCQENNVLLIAATGNDGCECLHVPASLPTVLAVGAMDD----------- 182 (306)
T ss_dssp HTTCSEEEECCCEEE--SSSCCCHHHHHHHHHHHHTTCEEEEECCSSSSBCEEETTTSTTCEEEEEECT-----------
T ss_pred cccceeeeccccccc--cCCCccHHHHHHHHHHHHcCCeEEEecCCCCcccccccccCCcceEEEEecC-----------
Confidence 999999999999752 2233455677888899999999999999999888888888999999998421
Q ss_pred CCeEEEeEEeecCCCCCCceeeEEecCCCCccccccccCCCCCCCccceeEEEEecCCCchhhHHHHHHHcCceEEEEec
Q 004278 362 DGRRLSGVSLYAGAPLSEKMYPLIYPGKSGVLSASLCMENSLDPNLVRGKIVICDRGSSPRVAKGLVVKKAGGVGMILAN 441 (764)
Q Consensus 362 ~g~~~~g~~~~~~~~~~~~~~plv~~~~~~~~~~~~C~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~i~~n 441 (764)
T Consensus 183 -------------------------------------------------------------------------------- 182 (306)
T 4h6w_A 183 -------------------------------------------------------------------------------- 182 (306)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCCCcccHHHHHHHHHcCCCCeEEEEecceeecccCCCeeecccCCCCCCCCCCCCCCcEEcCCCcEEecccCCCCCC
Q 004278 442 GISNGEGLVGDAVKAYISSTANPTATIDFKGTILGIKPAPVVASFSARGPNGLNPEILKPDLIAPGVNILAAWTEAVGPT 521 (764)
Q Consensus 442 ~~~~~~~~~~~~~~~y~~~~~~~~~~i~~~~t~~~~~~~~~~a~fSS~Gp~~~~~~~lKPDI~APG~~I~sa~~~~~~~~ 521 (764)
.+.++.||++|+. ..||||+|||++|+++++.+
T Consensus 183 --------------------------------------~~~~~~~s~~g~~-----~~~~di~APG~~i~s~~~~~---- 215 (306)
T 4h6w_A 183 --------------------------------------QGKPVDFSNWGDA-----YQKQGILAPGKDILGAKPNG---- 215 (306)
T ss_dssp --------------------------------------TSCBCSSSCBCHH-----HHHHEEEEECSSEEEECTTS----
T ss_pred --------------------------------------CCCccccccccCC-----cCcceeecCCcCcccccCCC----
Confidence 1256789999975 35899999999999998876
Q ss_pred CCCCCCccceeEEeccccchhhhHHHHHHHHhhh----CCCCCHHHHHHHHHhccccccCCCCCCCccCCCCCCCCCCCC
Q 004278 522 GLDSDLRKTEFNILSGTSMACPHVSGAAALLKSA----HPDWSPAAIRSAMMTTASIVDNSNQPMTDEATGNASTPYDFG 597 (764)
Q Consensus 522 ~~~~~~~~~~y~~~sGTSmAaP~VAGvaALl~~~----~P~~sp~~ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~G 597 (764)
.|..++|||||||||||++|||+++ +|.|+|+|||++|++||+++...+ ......||
T Consensus 216 ---------~~~~~sGTS~AaP~VaG~~All~s~~~~~~p~~t~~~v~~~L~~tA~~~~~~~----------~~~~~~~G 276 (306)
T 4h6w_A 216 ---------GTIRLSGTSFATPIVSGVAALLLSLQIKRGEKPDPQKVKNALLASATPCNPKD----------TDDQSRCL 276 (306)
T ss_dssp ---------CEEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHTCBCCCTTT----------CSCGGGGT
T ss_pred ---------ceeccCCCcchhHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHhhCccCCCCC----------CCCCCCcc
Confidence 7999999999999999999999864 699999999999999999875322 12234799
Q ss_pred CCcccccccCC
Q 004278 598 AGHVNLDRAMD 608 (764)
Q Consensus 598 ~G~vn~~~Al~ 608 (764)
+|+||+.+|++
T Consensus 277 ~G~ln~~~Av~ 287 (306)
T 4h6w_A 277 MGKLNILDAIE 287 (306)
T ss_dssp TCBCCHHHHHH
T ss_pred eeecCHHHHHH
Confidence 99999999986
No 21
>3lpc_A APRB2; protease, subtilase, virulence factor, hydrolase; 1.70A {Dichelobacter nodosus} PDB: 3lpa_A 3lpd_A 3ti9_A 3ti7_A
Probab=100.00 E-value=7.3e-49 Score=427.42 Aligned_cols=300 Identities=26% Similarity=0.333 Sum_probs=222.4
Q ss_pred cCCCccCCCCCCCcEEEEEecCCCCCCCCccCCCCCCCCCcceeeeecccccCcccCCceee---eeeeccccccccCCC
Q 004278 122 QQGLWSESDYGSDVIIGVFDTGIWPERRSFSDLNIGSIPSKWKGVCQVGVKFTAKNCNKKII---GARFFSKGHEAAGGS 198 (764)
Q Consensus 122 ~~~~~~~~~~G~gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kii---g~~~~~~g~~~~~~~ 198 (764)
+..+|+.+++|+||+||||||||+ +||+|.++-.. .|+ ...........+.+.. ....+.+.+.
T Consensus 21 ~~~aw~~g~~G~gV~VaViDtGi~-~hp~l~~~~~~----~~~---~~~~~~~~~d~~~~~~~~~~~~~~~~~~~----- 87 (340)
T 3lpc_A 21 ADKVWDMGFTGQNVVVAVVDTGIL-HHRDLNANVLP----GYD---FISNSQISLDGDGRDADPFDEGDWFDNWA----- 87 (340)
T ss_dssp HHHHHHHTCSCTTCEEEEEESCBC-CCTTTGGGBCC----CEE---CCCCHHHHCSSSSSBSCCBCCCCCBCTTT-----
T ss_pred HHHHHHhcCCCCCeEEEEEcCCCC-CChhhhccccc----Ccc---ccCCccccccCCCccCCcccccccccccc-----
Confidence 346899999999999999999998 99999753111 111 0000000000000000 0000000000
Q ss_pred CCCCCCCCCCccccCCCCCCCCChhhhHHHhcccCCCCCCccccccceeeeecCCCcEEEEEeecCCCCCCHHHHHHHHH
Q 004278 199 AGPIGGGINETVEFMSPRDADGHGTHTASTAAGRHAFRASMEGYAAGVAKGVAPKARLAVYKVCWKNAGCFDSDILAAFD 278 (764)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~D~~gHGThVAgi~AG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g~~~s~i~~ai~ 278 (764)
....+.+.....|..||||||||||+|...++.+ +.||||+|+|+.+|+++.. +++.++++++|+
T Consensus 88 ------~~~~~~~~~~~~d~~gHGT~vAgiia~~~~~~~g--------~~GvAp~a~l~~~~v~~~~-~~~~~~~~~ai~ 152 (340)
T 3lpc_A 88 ------CGGRPDPRKERSDSSWHGSHVAGTIAAVTNNRIG--------VAGVAYGAKVVPVRALGRC-GGYDSDISDGLY 152 (340)
T ss_dssp ------TSCTTCGGGSCBCCCCHHHHHHHHHHCCCSSSSS--------CCCTTTTSEEEEEECCBTT-BCCHHHHHHHHH
T ss_pred ------ccCCCCcccCCCCCCCCHHHHHHHHHccCCCCCc--------ceeecCCCEEEEEEEecCC-CCcHHHHHHHHH
Confidence 0001223345678999999999999998655433 4799999999999999987 688999999999
Q ss_pred HHHh----------CCCcEEEeccCCCCCCCCCCCCCHHHHHHHHhhcCCcEEEEecCCCCCCCC-ccccCCCceEEecC
Q 004278 279 AAVN----------DGVDVISISIGGGDGISSPYYLDPIAIGSYGAASRGVFVSSSAGNDGPNGM-SVTNLAPWIVTVGA 347 (764)
Q Consensus 279 ~A~~----------~gvdVIn~SlG~~~g~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~-~~~~~~p~vitVgA 347 (764)
||++ .+++|||||||... .....+..++.++.++|++||+||||+|.... .++...|++|+|||
T Consensus 153 ~a~~~~~~~~~~~~~~~~Vin~S~G~~~-----~~~~~~~~~~~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga 227 (340)
T 3lpc_A 153 WAAGGRIAGIPENRNPAKVINMSLGSDG-----QCSYNAQTMIDRATRLGALVVVAAGNENQNASNTWPTSCNNVLSVGA 227 (340)
T ss_dssp HHHTCCCTTSCCCSSCCSEEEECCCEES-----CCCHHHHHHHHHHHHHTCEEEEECCSSSSBGGGEETTTSSSCEEEEE
T ss_pred HHhcccccccccccCCCeEEEeCcCCCC-----CcchhHHHHHHHHHhCCcEEEEeCCCCCCCCCCcCCccCCceEEEec
Confidence 9998 89999999999862 12455777788899999999999999997654 46778899999998
Q ss_pred CccCCccceEEEeCCCeEEEeEEeecCCCCCCceeeEEecCCCCccccccccCCCCCCCccceeEEEEecCCCchhhHHH
Q 004278 348 GTIDRNFPAEVRLGDGRRLSGVSLYAGAPLSEKMYPLIYPGKSGVLSASLCMENSLDPNLVRGKIVICDRGSSPRVAKGL 427 (764)
Q Consensus 348 st~d~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~plv~~~~~~~~~~~~C~~~~~~~~~~~gkivl~~~g~~~~~~~~~ 427 (764)
++.
T Consensus 228 ~~~----------------------------------------------------------------------------- 230 (340)
T 3lpc_A 228 TTS----------------------------------------------------------------------------- 230 (340)
T ss_dssp ECT-----------------------------------------------------------------------------
T ss_pred CCC-----------------------------------------------------------------------------
Confidence 421
Q ss_pred HHHHcCceEEEEeccCCCCCcccHHHHHHHHHcCCCCeEEEEecceeecccCCCeeecccCCCCCCCCCCCCCCcEEcCC
Q 004278 428 VVKKAGGVGMILANGISNGEGLVGDAVKAYISSTANPTATIDFKGTILGIKPAPVVASFSARGPNGLNPEILKPDLIAPG 507 (764)
Q Consensus 428 ~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~y~~~~~~~~~~i~~~~t~~~~~~~~~~a~fSS~Gp~~~~~~~lKPDI~APG 507 (764)
.+.++.||++|| ||||+|||
T Consensus 231 ----------------------------------------------------~~~~~~~S~~g~--------~~di~ApG 250 (340)
T 3lpc_A 231 ----------------------------------------------------RGIRASFSNYGV--------DVDLAAPG 250 (340)
T ss_dssp ----------------------------------------------------TSSBCTTCCBST--------TCCEEEEC
T ss_pred ----------------------------------------------------CCCcCCCCCCCC--------CceEEecC
Confidence 125789999998 47999999
Q ss_pred CcEEecccCCCCCCCCCCCCccceeEEeccccchhhhHHHHHHHHhhh-C---CCCCHHHHHHHHHhccccccCCCCCCC
Q 004278 508 VNILAAWTEAVGPTGLDSDLRKTEFNILSGTSMACPHVSGAAALLKSA-H---PDWSPAAIRSAMMTTASIVDNSNQPMT 583 (764)
Q Consensus 508 ~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAGvaALl~~~-~---P~~sp~~ik~~L~~TA~~~~~~~~~~~ 583 (764)
++|+++++.+... .....|..++|||||||||||++|||+|+ + |.|++++||++|++||+++..
T Consensus 251 ~~i~s~~~~~~~~------~~~~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~p~lt~~~v~~~L~~tA~~~~~------ 318 (340)
T 3lpc_A 251 QDILSTVDSGTRR------PVSDAYSFMAGTSMATPHVSGVAALVISAANSVNKNLTPAELKDVLVSTTSPFNG------ 318 (340)
T ss_dssp SSEEEEEESCSSS------CCSEEEEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHTCBCCSS------
T ss_pred CCeecccCCCCcC------CCCCcceecccHhHHHHHHHHHHHHHHHhhhhhCCCCCHHHHHHHHHhcCCcCCC------
Confidence 9999998765321 12236999999999999999999999998 5 999999999999999998631
Q ss_pred ccCCCCCCCCCCCCCCcccccccCCCC
Q 004278 584 DEATGNASTPYDFGAGHVNLDRAMDPG 610 (764)
Q Consensus 584 ~~~~~~~~~~~~~G~G~vn~~~Al~~g 610 (764)
..+..||+|+||+.+|++..
T Consensus 319 -------~~~~~~G~G~vd~~~Av~~~ 338 (340)
T 3lpc_A 319 -------RLDRALGSGIVDAEAAVNSV 338 (340)
T ss_dssp -------CCSSCCCSSBCCHHHHHHHH
T ss_pred -------CCCCCcccceecHHHHHHHH
Confidence 23458999999999998743
No 22
>2iy9_A SUBA; toxin, shiga, plasmid; 1.8A {Escherichia coli}
Probab=100.00 E-value=6.5e-49 Score=428.80 Aligned_cols=270 Identities=21% Similarity=0.161 Sum_probs=215.5
Q ss_pred CCCccCCCCCC--CcEEEEEecCCCCCCCCccCCCCCCCCCcceeeeecccccCcccCCceeeeeeeccccccccCCCCC
Q 004278 123 QGLWSESDYGS--DVIIGVFDTGIWPERRSFSDLNIGSIPSKWKGVCQVGVKFTAKNCNKKIIGARFFSKGHEAAGGSAG 200 (764)
Q Consensus 123 ~~~~~~~~~G~--gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~g~~~~~~~~~ 200 (764)
..+|+. .+|+ ||+||||||||| +||+|.++ ++..++|... +.
T Consensus 33 ~~aw~~-~~G~~~gv~VaViDsGid-~Hp~l~~~---------------------------~~~~~~~~~~-----~~-- 76 (347)
T 2iy9_A 33 TETTMS-LTDKNTPVVVSVVDSGVA-FIGGLSDS---------------------------EFAKFSFTQD-----GS-- 76 (347)
T ss_dssp CHHHHH-TSCTTSCCEEEEEESCCC-CCGGGTTC---------------------------EEEEEECBTT-----CC--
T ss_pred HHHHHH-hcCCCCCCEEEEEcCCCc-CChhhhcC---------------------------cccCCcccCC-----CC--
Confidence 468988 8899 999999999999 99999642 3333444331 00
Q ss_pred CCCCCCCCccccCCCCCCCCChhhhHHHhcccCCCCCCccccccceeeeecCCCcEEEEEeecCCCCCCHHHHHHHHHHH
Q 004278 201 PIGGGINETVEFMSPRDADGHGTHTASTAAGRHAFRASMEGYAAGVAKGVAPKARLAVYKVCWKNAGCFDSDILAAFDAA 280 (764)
Q Consensus 201 ~~~~~~~~~~~~~~~~D~~gHGThVAgi~AG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g~~~s~i~~ai~~A 280 (764)
......+.|..||||||||||+|+ . | +.||||+|+|+.+|++++. +.. ++++||+||
T Consensus 77 --------~~~~~~~~d~~gHGT~vAgiia~~--~-----g-----~~GvAp~a~l~~~~v~~~~-~~~--~~~~ai~~a 133 (347)
T 2iy9_A 77 --------PFPVKKSEALYIHGTAMASLIASR--Y-----G-----IYGVYPHALISSRRVIPDG-VQD--SWIRAIESI 133 (347)
T ss_dssp --------SSCCSSSHHHHHHHHHHHHHHHCS--S-----S-----SCCSSTTCEEEEEECCSSB-CTT--HHHHHHHHH
T ss_pred --------CCCCCCCCCCCCcHHHHHHHHhcc--c-----C-----CcccCCCCEEEEEEEecCC-CHH--HHHHHHHHH
Confidence 011124567889999999999997 1 1 3799999999999999876 333 999999999
Q ss_pred HhC------CCcEEEeccCCCCCCCCCCCCCHHHHHHHHhhcCCcEEEEecCCCCCC-------CCccccCCC-------
Q 004278 281 VND------GVDVISISIGGGDGISSPYYLDPIAIGSYGAASRGVFVSSSAGNDGPN-------GMSVTNLAP------- 340 (764)
Q Consensus 281 ~~~------gvdVIn~SlG~~~g~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~-------~~~~~~~~p------- 340 (764)
+++ |++|||||||.. ......+.+..++..+.++|++||+||||+|.. ...+++..|
T Consensus 134 ~~~~~~~~~~~~Vin~S~G~~---~~~~~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~~~~~~~~Pa~~~~~~~~~~ 210 (347)
T 2iy9_A 134 MSNVFLAPGEEKIINISGGQK---GVASASVWTELLSRMGRNNDRLIVAAVGNDGADIRKLSAQQRIWPAAYHPVSSVNK 210 (347)
T ss_dssp HTCTTSCTTEEEEEEESSCBC---CC-CCHHHHHHHHHHHHHTSCEEEEECCBSCCBTTTSCTTTSCBTTTCCCCSHHHH
T ss_pred HhhhhcccCCceEEEeccccC---CCCCcCHHHHHHHHHHHhCCeEEEEeCCCCCCCCCCcccccccCCCcCcccccccc
Confidence 999 999999999986 223345678888889999999999999999975 346677788
Q ss_pred ---ceEEecCCcc--CCccceEEEeCCCeEEEeEEeecCCCCCCceeeEEecCCCCccccccccCCCCCCCccceeEEEE
Q 004278 341 ---WIVTVGAGTI--DRNFPAEVRLGDGRRLSGVSLYAGAPLSEKMYPLIYPGKSGVLSASLCMENSLDPNLVRGKIVIC 415 (764)
Q Consensus 341 ---~vitVgAst~--d~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~plv~~~~~~~~~~~~C~~~~~~~~~~~gkivl~ 415 (764)
++|+|||.+. +...
T Consensus 211 ~~~~vi~Vga~~~~~~g~~------------------------------------------------------------- 229 (347)
T 2iy9_A 211 KQDPVIRVAALAQYRKGET------------------------------------------------------------- 229 (347)
T ss_dssp HTCCEEEEEEECCCCTTSC-------------------------------------------------------------
T ss_pred ccCCEEEEEEcccCCCCce-------------------------------------------------------------
Confidence 9999998543 1100
Q ss_pred ecCCCchhhHHHHHHHcCceEEEEeccCCCCCcccHHHHHHHHHcCCCCeEEEEecceeecccCCCeeecccCCCCCCCC
Q 004278 416 DRGSSPRVAKGLVVKKAGGVGMILANGISNGEGLVGDAVKAYISSTANPTATIDFKGTILGIKPAPVVASFSARGPNGLN 495 (764)
Q Consensus 416 ~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~y~~~~~~~~~~i~~~~t~~~~~~~~~~a~fSS~Gp~~~~ 495 (764)
.......+.||++||+
T Consensus 230 -------------------------------------------------------------~~~~~~~~~fS~~G~~--- 245 (347)
T 2iy9_A 230 -------------------------------------------------------------PVLHGGGITGSRFGNN--- 245 (347)
T ss_dssp -------------------------------------------------------------CCBCCCSSSCBCBCTT---
T ss_pred -------------------------------------------------------------ecccCCCCCCCCCCCC---
Confidence 0001245799999995
Q ss_pred CCCCCCcEEcCCCcEEecccCCCCCCCCCCCCccceeEEeccccchhhhHHHHHHHHhhhCCCCCHHHHHHHHHhccccc
Q 004278 496 PEILKPDLIAPGVNILAAWTEAVGPTGLDSDLRKTEFNILSGTSMACPHVSGAAALLKSAHPDWSPAAIRSAMMTTASIV 575 (764)
Q Consensus 496 ~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAGvaALl~~~~P~~sp~~ik~~L~~TA~~~ 575 (764)
||||+|||++|+++++.+ .|..++|||||||||||++|||+|++|+|++.+||++|++||+++
T Consensus 246 ----~~di~APG~~i~s~~~~~-------------~~~~~sGTS~AaP~VaG~aAll~~~~p~lt~~~v~~~L~~tA~~~ 308 (347)
T 2iy9_A 246 ----WVDIAAPGQNITFLRPDA-------------KTGTGSGTSEATAIVSGVLAAMTSCNPRATATELKRTLLESADKY 308 (347)
T ss_dssp ----TCSEEEECSSEEEECTTS-------------CEEEECSHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHSEEC
T ss_pred ----CCEEEeCCCCeEeecCCC-------------CeEeccchHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccC
Confidence 689999999999998865 799999999999999999999999999999999999999999987
Q ss_pred cCCCCCCCccCCCCCCCCCCCCCCcccccccCCC
Q 004278 576 DNSNQPMTDEATGNASTPYDFGAGHVNLDRAMDP 609 (764)
Q Consensus 576 ~~~~~~~~~~~~~~~~~~~~~G~G~vn~~~Al~~ 609 (764)
...+ +..||+|+||+.+|++.
T Consensus 309 ~~~~-------------~~~~G~G~ld~~~A~~~ 329 (347)
T 2iy9_A 309 PSLV-------------DKVTEGRVLNAEKAISM 329 (347)
T ss_dssp GGGT-------------TTSGGGEECCHHHHHHH
T ss_pred CCCC-------------CccccCCEecHHHHHHH
Confidence 5321 25899999999999874
No 23
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=100.00 E-value=1.5e-47 Score=460.75 Aligned_cols=359 Identities=24% Similarity=0.266 Sum_probs=244.4
Q ss_pred CCCCCChhhhHHHhcccCCCCCCccccccceeeeecCCCcEEEEEeecCCCC--CCHHHHHHHHHHHHh-----CCCcEE
Q 004278 216 RDADGHGTHTASTAAGRHAFRASMEGYAAGVAKGVAPKARLAVYKVCWKNAG--CFDSDILAAFDAAVN-----DGVDVI 288 (764)
Q Consensus 216 ~D~~gHGThVAgi~AG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g--~~~s~i~~ai~~A~~-----~gvdVI 288 (764)
.|++||||||||||||.. ++.+ +.||||+|+|+.+|+++...+ ++.++++.+|.+|++ .|++||
T Consensus 267 ~D~~GHGThVAGIIAa~~-N~~g--------~~GVAP~AkI~~vKVld~~~g~~~t~s~l~~AI~~Aid~a~~~~gadVI 337 (1354)
T 3lxu_X 267 GMSSPHGTHVSSIASGNH-SSRD--------VDGVAPNAKIVSMTIGDGRLGSMETGTALVRAMTKVMELCRDGRRIDVI 337 (1354)
T ss_dssp ECCCHHHHHHHHHHCCCC-SSSS--------SCCSCTTCEEEEEECBCTTTSSCBCHHHHHHHHHHHHHHHHTTCCCCEE
T ss_pred CCCCCcHHHHHHHHhcCC-CCCC--------ceeecCCCEEEEEEeccCCCCcccChHHHHHHHHHHHHHHhhcCCceEE
Confidence 478999999999999986 3322 479999999999999987522 255678888888887 799999
Q ss_pred EeccCCCCCCCCCCCCCHHHHHHHHhh-cCCcEEEEecCCCCCCCCc--ccc--CCCceEEecCCccCCccceEEEeCCC
Q 004278 289 SISIGGGDGISSPYYLDPIAIGSYGAA-SRGVFVSSSAGNDGPNGMS--VTN--LAPWIVTVGAGTIDRNFPAEVRLGDG 363 (764)
Q Consensus 289 n~SlG~~~g~~~~~~~~~~~~a~~~a~-~~Gi~vV~AAGN~G~~~~~--~~~--~~p~vitVgAst~d~~~~~~~~~~~g 363 (764)
|||||.. ......+.+..++.++. ++|++||+||||+|+...+ .++ .++++|+|||++.+.........
T Consensus 338 NmS~G~~---~~~~~~~~l~~aI~~A~~~~GVlVVaAAGN~G~~~~ti~~PA~~ss~~VItVGAtd~~~~~~a~ys~--- 411 (1354)
T 3lxu_X 338 NMSYGEH---ANWSNSGRIGELMNEVVNKYGVVWVASAGNHGPALCTVGTPPDISQPSLIGVGAYVSPQMMEAEYAM--- 411 (1354)
T ss_dssp EECCCCC---CSCSSCCHHHHHHHHHHHTSCCEEEEECCSCCSSSSCCCTTTCSSSSCEEEEEEECCTTCCCC-------
T ss_pred EcCCccC---CCCCccHHHHHHHHHHHHhCCcEEEEeCCCCCCCCCccCCcccccCCceEEEEeecCCCCccccccc---
Confidence 9999998 32223467777777775 8999999999999986544 445 48999999996543221100000
Q ss_pred eEEEeEEeecCCCCCCceeeEEecCCCCccccccccCCCCCCCccceeEEEEecCCCchhhHHHHHHHcCceEEEEeccC
Q 004278 364 RRLSGVSLYAGAPLSEKMYPLIYPGKSGVLSASLCMENSLDPNLVRGKIVICDRGSSPRVAKGLVVKKAGGVGMILANGI 443 (764)
Q Consensus 364 ~~~~g~~~~~~~~~~~~~~plv~~~~~~~~~~~~C~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~ 443 (764)
T Consensus 412 -------------------------------------------------------------------------------- 411 (1354)
T 3lxu_X 412 -------------------------------------------------------------------------------- 411 (1354)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCcccHHHHHHHHHcCCCCeEEEEecceeecccCCCeeecccCCCCCCCCCCCCCCcEEcCCCcEEecccCCCCCCCC
Q 004278 444 SNGEGLVGDAVKAYISSTANPTATIDFKGTILGIKPAPVVASFSARGPNGLNPEILKPDLIAPGVNILAAWTEAVGPTGL 523 (764)
Q Consensus 444 ~~~~~~~~~~~~~y~~~~~~~~~~i~~~~t~~~~~~~~~~a~fSS~Gp~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~ 523 (764)
.....+.++.|||+||+. ++.+||||+|||++|+++......
T Consensus 412 --------------------------------~~~~~g~~asFSS~GPt~--dg~~KpDIaAPG~~I~St~~~~~~---- 453 (1354)
T 3lxu_X 412 --------------------------------REKLPGNVYTWTSRDPCI--DGGQGVTVCAPGGAIASVPQFTMS---- 453 (1354)
T ss_dssp --------------------------------------CCCCCCCCSCCS--SSSCCEEEEEEC----------------
T ss_pred --------------------------------ccCCCCccccccCCCCCc--cCCCcceEEecCceEEEeecCCCC----
Confidence 001123689999999995 489999999999999998654322
Q ss_pred CCCCccceeEEeccccchhhhHHHHHHHHhh----hCCCCCHHHHHHHHHhccccccCCCCCCCccCCCCCCCCCCCCCC
Q 004278 524 DSDLRKTEFNILSGTSMACPHVSGAAALLKS----AHPDWSPAAIRSAMMTTASIVDNSNQPMTDEATGNASTPYDFGAG 599 (764)
Q Consensus 524 ~~~~~~~~y~~~sGTSmAaP~VAGvaALl~~----~~P~~sp~~ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~G~G 599 (764)
.|..++|||||||||||++|||++ ++|+|++++||++|++||+++.. ..++.||+|
T Consensus 454 -------~y~~~SGTSmAAP~VAGvAALLLSalkq~~P~LTp~qVk~lL~~TA~~~~~-------------~~~~~~G~G 513 (1354)
T 3lxu_X 454 -------KSQLMNGTSMAAPHVAGAVALLISGLKQQNIEYSPYSIKRAISVTATKLGY-------------VDPFAQGHG 513 (1354)
T ss_dssp ----------CCCCGGGCHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHTTSBCCTT-------------SCTTTSSSS
T ss_pred -------ceecCCCCCHHHHHHHHHHHHHHHhhHhhCCCCCHHHHHHHHHHhCccCCC-------------CCcccccCC
Confidence 789999999999999999999986 89999999999999999998742 344689999
Q ss_pred cccccccCCCCceecCCchhhhhhhccCCCCc-cceeEeecccccCCCCCCCCCCCCCCceeeeeccCcCcceeEEEEEE
Q 004278 600 HVNLDRAMDPGLVYDITNDDYVNFLCANGYGP-KLIQVITRIPARCPAKRPRPENLNYPSIAALFSTQSRGVSSKSFIRT 678 (764)
Q Consensus 600 ~vn~~~Al~~glv~d~~~~dy~~~lc~~~~~~-~~~~~~~~~~~~c~~~~~~~~~lN~ps~~~~~~~~~~~~~~~~~~rt 678 (764)
+||+.+|++..+.|+..+.+|+.|+|..++.. ..|-+ +.. .| +... . ...+++-+
T Consensus 514 lLDa~~AV~~a~~~~~~p~~~v~f~~~v~~~~~rgIyl--R~~-~~------------~~~~-------~--~tv~V~p~ 569 (1354)
T 3lxu_X 514 LLNVEKAFEHLTEHRQSKDNMLRFSVRVGNNADKGIHL--RQG-VQ------------RNSI-------D--YNVYIEPI 569 (1354)
T ss_dssp BCCHHHHHHHHHTTTTCGGGGEEEEEEETTTTBSSEEE--CSS-CC------------CSCE-------E--EEEEEEEE
T ss_pred EeCHHHHHHHHHhcCCCCccceEEEEEecCCCCCceEE--ecc-cc------------CCce-------E--EEEEEeee
Confidence 99999999999999999999999999988643 22211 100 00 0000 0 22223333
Q ss_pred EEecCC--CCe----EEEEEEEcCCCCeEEEEecCeeEeccCceEEEEEEEEEecccccccCCCccEEEEEEEEC-----
Q 004278 679 VTNVGQ--PNA----VYTVKVVSPEKGVTVTVKPSRLVFTEGVKKSSFVVTVTADSKNLVLNDSGAAFGSISWSD----- 747 (764)
Q Consensus 679 vtNvg~--~~~----ty~~~~~~p~~g~~v~v~p~~l~~~~~~~~~~~~vt~~~~~~~~~~~~~~~~~G~~~~~~----- 747 (764)
..|... ... .-++.+... + .+..-|+.|.+ .++.++|.|++.... . ..+. .|+.|..-|
T Consensus 570 f~~~~~~~~~~~i~f~~~l~L~~t-~--~wv~~p~~l~l--~~~~r~~~v~vDp~~---L-~~G~-h~~~v~~~D~~~~~ 639 (1354)
T 3lxu_X 570 FYNDKEADPKDKFNFNVRLNLIAS-Q--PWVQCGAFLDL--SYGTRSIAVRVDPTG---L-QPGV-HSAVIRAYDTDCVQ 639 (1354)
T ss_dssp ESSCSCSSSTTCSCCCCEEEEEES-S--TTEEECSCEEC--TTSCEEEEEEECGGG---C-CSEE-EEEEEEEEESSCTT
T ss_pred ecCcccCChhhccceEEEEEEecC-C--Cceecccceee--cCCCceEEEEECCCC---C-CCcc-eeEEEEEEEcCCcc
Confidence 322111 111 122222222 1 12223777876 577888999998765 2 2345 889998765
Q ss_pred CccEEEEEEEEEec
Q 004278 748 GKHEVRSPLVVTQL 761 (764)
Q Consensus 748 ~~~~v~~p~~v~~~ 761 (764)
.+...|+||.|...
T Consensus 640 ~gp~f~ipvTv~~P 653 (1354)
T 3lxu_X 640 KGSLFEIPVTVVQP 653 (1354)
T ss_dssp SCCSEEEEEEEEEC
T ss_pred cCceEEeeEEEEee
Confidence 36889999988543
No 24
>1sh7_A Extracellular subtilisin-like serine proteinase; cold adaptation, psychrotrophic, subtilisin-like proteinase, depentent, hydrolase; HET: PMS; 1.84A {Vibrio SP} PDB: 1s2n_A*
Probab=100.00 E-value=2.7e-47 Score=403.20 Aligned_cols=236 Identities=30% Similarity=0.411 Sum_probs=200.2
Q ss_pred CCCccCCCCCCCcEEEEEecCCCCCCCCccCCCCCCCCCcceeeeecccccCcccCCceeeeeeeccccccccCCCCCCC
Q 004278 123 QGLWSESDYGSDVIIGVFDTGIWPERRSFSDLNIGSIPSKWKGVCQVGVKFTAKNCNKKIIGARFFSKGHEAAGGSAGPI 202 (764)
Q Consensus 123 ~~~~~~~~~G~gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~g~~~~~~~~~~~ 202 (764)
..+|..+.+|+||+|+|||||||++||+|.++ ++..++|.+.
T Consensus 19 ~~aw~~~~~G~gv~VaViDtGvd~~h~~l~~~---------------------------~~~~~~~~~~----------- 60 (284)
T 1sh7_A 19 DRNYNANFDGFGVTAYVIDTGVNNNHEEFGGR---------------------------SVSGYDFVDN----------- 60 (284)
T ss_dssp CSBCCCSCCCTTCEEEEEESCCCTTCTTTTTC---------------------------EEEEEETTTT-----------
T ss_pred hhhhhcCCCCCCCEEEEEcCCCCCCChhHcCC---------------------------ccccccccCC-----------
Confidence 35899999999999999999999999999742 2333334321
Q ss_pred CCCCCCccccCCCCCCCCChhhhHHHhcccCCCCCCccccccceeeeecCCCcEEEEEeecCCCCCCHHHHHHHHHHHHh
Q 004278 203 GGGINETVEFMSPRDADGHGTHTASTAAGRHAFRASMEGYAAGVAKGVAPKARLAVYKVCWKNAGCFDSDILAAFDAAVN 282 (764)
Q Consensus 203 ~~~~~~~~~~~~~~D~~gHGThVAgi~AG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g~~~s~i~~ai~~A~~ 282 (764)
...+.|..||||||||||+|+. .||||+|+|+.+|++++.+.++.+++++||+|+++
T Consensus 61 ---------~~~~~d~~gHGT~vAgiia~~~--------------~GvAp~a~l~~~kv~~~~g~~~~~~~~~ai~~a~~ 117 (284)
T 1sh7_A 61 ---------DADSSDCNGHGTHVAGTIGGSQ--------------YGVAKNVNIVGVRVLSCSGSGTTSGVISGVDWVAQ 117 (284)
T ss_dssp ---------BSCCCCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECBCTTSCBCHHHHHHHHHHHHH
T ss_pred ---------CCCCCCCCCcHHHHHHHHhccc--------------CCcCCCCEEEEEEeeCCCCCcCHHHHHHHHHHHHh
Confidence 1245678999999999999863 59999999999999987734788899999999998
Q ss_pred C--CCcEEEeccCCCCCCCCCCCCCHHHHHHHHhhcCCcEEEEecCCCCCCCC-ccccCCCceEEecCCccCCccceEEE
Q 004278 283 D--GVDVISISIGGGDGISSPYYLDPIAIGSYGAASRGVFVSSSAGNDGPNGM-SVTNLAPWIVTVGAGTIDRNFPAEVR 359 (764)
Q Consensus 283 ~--gvdVIn~SlG~~~g~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~-~~~~~~p~vitVgAst~d~~~~~~~~ 359 (764)
+ +++|||||||.. ....+..++.++.++|++||+||||+|.... ..+...|++|+|||++.
T Consensus 118 ~~~~~~Vin~S~G~~-------~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~--------- 181 (284)
T 1sh7_A 118 NASGPSVANMSLGGG-------QSTALDSAVQGAIQSGVSFMLAAGNSNADACNTSPARVPSGVTVGSTTS--------- 181 (284)
T ss_dssp HCCSSEEEEECCCBS-------CCHHHHHHHHHHHHTTCEEEEECCSSSSBGGGSBTTTCTTSEEEEEECT---------
T ss_pred CCCCCcEEEeCCCCC-------CCHHHHHHHHHHHHCCCEEEEECCcCCCCCCccccccCCCeEEEEEecC---------
Confidence 4 799999999987 2467788888899999999999999997643 45778899999998421
Q ss_pred eCCCeEEEeEEeecCCCCCCceeeEEecCCCCccccccccCCCCCCCccceeEEEEecCCCchhhHHHHHHHcCceEEEE
Q 004278 360 LGDGRRLSGVSLYAGAPLSEKMYPLIYPGKSGVLSASLCMENSLDPNLVRGKIVICDRGSSPRVAKGLVVKKAGGVGMIL 439 (764)
Q Consensus 360 ~~~g~~~~g~~~~~~~~~~~~~~plv~~~~~~~~~~~~C~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~i~ 439 (764)
T Consensus 182 -------------------------------------------------------------------------------- 181 (284)
T 1sh7_A 182 -------------------------------------------------------------------------------- 181 (284)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eccCCCCCcccHHHHHHHHHcCCCCeEEEEecceeecccCCCeeecccCCCCCCCCCCCCCCcEEcCCCcEEecccCCCC
Q 004278 440 ANGISNGEGLVGDAVKAYISSTANPTATIDFKGTILGIKPAPVVASFSARGPNGLNPEILKPDLIAPGVNILAAWTEAVG 519 (764)
Q Consensus 440 ~n~~~~~~~~~~~~~~~y~~~~~~~~~~i~~~~t~~~~~~~~~~a~fSS~Gp~~~~~~~lKPDI~APG~~I~sa~~~~~~ 519 (764)
.+.++.||++||. |||+|||++|+++++.+
T Consensus 182 ----------------------------------------~~~~~~~S~~G~~--------~di~ApG~~i~s~~~~~-- 211 (284)
T 1sh7_A 182 ----------------------------------------SDSRSSFSNWGSC--------VDLFAPGSQIKSAWYDG-- 211 (284)
T ss_dssp ----------------------------------------TSBBCTTCCBSTT--------CCEEEECSSEEEECTTS--
T ss_pred ----------------------------------------CCCcCcccCCCCc--------cEEEeccCCeEEecCCC--
Confidence 1257899999996 69999999999998765
Q ss_pred CCCCCCCCccceeEEeccccchhhhHHHHHHHHhhhCCCCCHHHHHHHHHhcccccc
Q 004278 520 PTGLDSDLRKTEFNILSGTSMACPHVSGAAALLKSAHPDWSPAAIRSAMMTTASIVD 576 (764)
Q Consensus 520 ~~~~~~~~~~~~y~~~sGTSmAaP~VAGvaALl~~~~P~~sp~~ik~~L~~TA~~~~ 576 (764)
.|..++|||||||||||++|||+|++|+|+++|||++|++||++..
T Consensus 212 -----------~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~ 257 (284)
T 1sh7_A 212 -----------GYKTISGTSMATPHVAGVAALYLQENNGLTPLQLTGLLNSRASENK 257 (284)
T ss_dssp -----------SEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEESC
T ss_pred -----------CEEEccChHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCccCC
Confidence 7999999999999999999999999999999999999999999764
No 25
>1wmd_A Protease; alpha-beta hydrolase fold, jelly-roll beta-barrel, hydrolase; 1.30A {Bacillus SP} SCOP: b.18.1.20 c.41.1.1 PDB: 1wme_A 1wmf_A
Probab=100.00 E-value=1.5e-47 Score=430.22 Aligned_cols=291 Identities=27% Similarity=0.377 Sum_probs=222.1
Q ss_pred CCCcc-CCCCCCCcEEEEEecCCCC------CCCCccCCCCCCCCCcceeeeecccccCcccCCceeeeeeecccccccc
Q 004278 123 QGLWS-ESDYGSDVIIGVFDTGIWP------ERRSFSDLNIGSIPSKWKGVCQVGVKFTAKNCNKKIIGARFFSKGHEAA 195 (764)
Q Consensus 123 ~~~~~-~~~~G~gv~VgVIDtGid~------~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~g~~~~ 195 (764)
..+|. .+.+|+||+|||||||||+ .||+|.+ +++..++|.+.
T Consensus 11 ~~~~~~~g~~G~gv~VaViDtGvd~~~~~~~~hp~l~~---------------------------~i~~~~~~~~~---- 59 (434)
T 1wmd_A 11 DVAQSSYGLYGQGQIVAVADTGLDTGRNDSSMHEAFRG---------------------------KITALYALGRT---- 59 (434)
T ss_dssp HHHHHHHCCSCTTCEEEEEESCCTTSCSSTTSCTTTTT---------------------------CEEEEEETTTT----
T ss_pred hhhhhccCCCCcccEEEEEecCcCCCCCCcccCcccCC---------------------------CEeeeccccCC----
Confidence 35787 7899999999999999999 7999863 23333333321
Q ss_pred CCCCCCCCCCCCCccccCCCCCCCCChhhhHHHhcccCCCCCCccccccceeeeecCCCcEEEEEeecCCCCC---CHHH
Q 004278 196 GGSAGPIGGGINETVEFMSPRDADGHGTHTASTAAGRHAFRASMEGYAAGVAKGVAPKARLAVYKVCWKNAGC---FDSD 272 (764)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~D~~gHGThVAgi~AG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g~---~~s~ 272 (764)
..+.|..||||||||||+|+... +.||||+|+|+.+|+++.. +. ..++
T Consensus 60 -----------------~~~~d~~gHGT~VAgiiag~g~~-----------~~GvAp~a~l~~~~v~~~~-g~~~~~~~~ 110 (434)
T 1wmd_A 60 -----------------NNANDTNGHGTHVAGSVLGNGST-----------NKGMAPQANLVFQSIMDSG-GGLGGLPSN 110 (434)
T ss_dssp -----------------TCCCCSSSHHHHHHHHHHCCSSS-----------SCCSSTTSEEEEEECCCTT-SSCTTSCSS
T ss_pred -----------------CCCCCCCCcHHHHHHHHHcCCCC-----------ceeeCCCCEEEEEEeecCC-CccccccHH
Confidence 24567899999999999986321 4699999999999999876 43 3567
Q ss_pred HHHHHHHHHhCCCcEEEeccCCCCCCCCCCCCCHHHHHHHHh-hcCCcEEEEecCCCCCCC--CccccCCCceEEecCCc
Q 004278 273 ILAAFDAAVNDGVDVISISIGGGDGISSPYYLDPIAIGSYGA-ASRGVFVSSSAGNDGPNG--MSVTNLAPWIVTVGAGT 349 (764)
Q Consensus 273 i~~ai~~A~~~gvdVIn~SlG~~~g~~~~~~~~~~~~a~~~a-~~~Gi~vV~AAGN~G~~~--~~~~~~~p~vitVgAst 349 (764)
+.++|++|+++|++|||||||.. .... .+....++..+ .++|++||+||||+|... ...++.++++|+|||++
T Consensus 111 ~~~ai~~a~~~g~~Vin~S~G~~---~~~~-~~~~~~~id~~~~~~gvlvV~AAGN~g~~~~~~~~Pa~~~~vitVga~~ 186 (434)
T 1wmd_A 111 LQTLFSQAYSAGARIHTNSWGAA---VNGA-YTTDSRNVDDYVRKNDMTILFAAGNEGPNGGTISAPGTAKNAITVGATE 186 (434)
T ss_dssp HHHHHHHHHHTTCSEEEECCCBC---CTTC-CCHHHHHHHHHHHHSSCEEEEECCSCTTSSSCCCBSTTCSSSEEEEEEC
T ss_pred HHHHHHHHHhcCCeEEEecCCCC---cCCc-CCHHHHHHHHHHhCCCeEEEEECCCCCCCCcccCCcccCCccEEEeccc
Confidence 99999999999999999999987 2221 24455555555 689999999999999764 35667889999999965
Q ss_pred cCCccceEEEeCCCeEEEeEEeecCCCCCCceeeEEecCCCCccccccccCCCCCCCccceeEEEEecCCCchhhHHHHH
Q 004278 350 IDRNFPAEVRLGDGRRLSGVSLYAGAPLSEKMYPLIYPGKSGVLSASLCMENSLDPNLVRGKIVICDRGSSPRVAKGLVV 429 (764)
Q Consensus 350 ~d~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~plv~~~~~~~~~~~~C~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~ 429 (764)
..+....
T Consensus 187 ~~~~~~~------------------------------------------------------------------------- 193 (434)
T 1wmd_A 187 NLRPSFG------------------------------------------------------------------------- 193 (434)
T ss_dssp CSCGGGC-------------------------------------------------------------------------
T ss_pred ccCcccC-------------------------------------------------------------------------
Confidence 4321000
Q ss_pred HHcCceEEEEeccCCCCCcccHHHHHHHHHcCCCCeEEEEecceeecccCCCeeecccCCCCCCCCCCCCCCcEEcCCCc
Q 004278 430 KKAGGVGMILANGISNGEGLVGDAVKAYISSTANPTATIDFKGTILGIKPAPVVASFSARGPNGLNPEILKPDLIAPGVN 509 (764)
Q Consensus 430 ~~~Ga~g~i~~n~~~~~~~~~~~~~~~y~~~~~~~~~~i~~~~t~~~~~~~~~~a~fSS~Gp~~~~~~~lKPDI~APG~~ 509 (764)
. + ....+.++.|||+||+. ++++||||+|||++
T Consensus 194 ----~-----~------------------------------------~~~~~~~a~fS~~G~~~--~g~~kpdi~ApG~~ 226 (434)
T 1wmd_A 194 ----S-----Y------------------------------------ADNINHVAQFSSRGPTK--DGRIKPDVMAPGTF 226 (434)
T ss_dssp ----G-----G------------------------------------GSCTTSBCTTSCCCCCT--TSCCCCCEEEECSS
T ss_pred ----c-----c------------------------------------cCCCCccccccCCCCCC--CCCCCceEEcCCCC
Confidence 0 0 01234789999999995 49999999999999
Q ss_pred EEecccCCCCCCCCCCCCccceeEEeccccchhhhHHHHHHHHhhhCCCC-----CHHHHHHHHHhccccccCCCCCCCc
Q 004278 510 ILAAWTEAVGPTGLDSDLRKTEFNILSGTSMACPHVSGAAALLKSAHPDW-----SPAAIRSAMMTTASIVDNSNQPMTD 584 (764)
Q Consensus 510 I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAGvaALl~~~~P~~-----sp~~ik~~L~~TA~~~~~~~~~~~~ 584 (764)
|+++++........ .......|..++|||||||||||++|||+|++|++ ++++||++|++||+++.
T Consensus 227 i~s~~~~~~~~~~~-~~~~~~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~~~~~s~~~vk~~L~~tA~~~~-------- 297 (434)
T 1wmd_A 227 ILSARSSLAPDSSF-WANHDSKYAYMGGTSMATPIVAGNVAQLREHFVKNRGITPKPSLLKAALIAGAADIG-------- 297 (434)
T ss_dssp EEEECCTTCCGGGS-SEEEETTEEEECSHHHHHHHHHHHHHHHHHHHHHHSSSCCCHHHHHHHHHHHCBCCS--------
T ss_pred eEecCCCCCCCccc-ccCCCCceEeecchhHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHcCCcccC--------
Confidence 99998643210000 00012379999999999999999999999999876 89999999999998752
Q ss_pred cCCCCCCCCCCCCCCcccccccCCCC
Q 004278 585 EATGNASTPYDFGAGHVNLDRAMDPG 610 (764)
Q Consensus 585 ~~~~~~~~~~~~G~G~vn~~~Al~~g 610 (764)
....+..||||+||+.+|++..
T Consensus 298 ----~~~~~~~~G~G~vd~~~a~~~~ 319 (434)
T 1wmd_A 298 ----LGYPNGNQGWGRVTLDKSLNVA 319 (434)
T ss_dssp ----SCSSCTTTTTCBCCHHHHHTCE
T ss_pred ----CCCCCccCCcCeEeHHHhcccc
Confidence 2345679999999999999754
No 26
>4dzt_A Aqualysin-1, aqualysin-I; serine protease, calcium binding, inhibitor, hydrolase-hydro inhibitor complex; HET: PMS; 1.95A {Thermus aquaticus}
Probab=100.00 E-value=7e-47 Score=399.46 Aligned_cols=236 Identities=32% Similarity=0.407 Sum_probs=200.9
Q ss_pred CCCccCCCCCCCcEEEEEecCCCCCCCCccCCCCCCCCCcceeeeecccccCcccCCceeeeeeeccccccccCCCCCCC
Q 004278 123 QGLWSESDYGSDVIIGVFDTGIWPERRSFSDLNIGSIPSKWKGVCQVGVKFTAKNCNKKIIGARFFSKGHEAAGGSAGPI 202 (764)
Q Consensus 123 ~~~~~~~~~G~gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~g~~~~~~~~~~~ 202 (764)
..+|..+.+|+||+|+|||||||++||+|.++ +...++|..
T Consensus 21 ~~a~~~~~~G~gv~VaViDtGvd~~h~~l~~~---------------------------~~~~~~~~~------------ 61 (276)
T 4dzt_A 21 SNSYTYTATGRGVNVYVIDTGIRTTHREFGGR---------------------------ARVGYDALG------------ 61 (276)
T ss_dssp CSCEECSCCCTTCEEEEEESCCCTTCGGGTTC---------------------------EEEEEETTS------------
T ss_pred ccceecCCCCCCcEEEEEccCCCCCChhHccC---------------------------eeccccCCC------------
Confidence 45899999999999999999999999999642 222233322
Q ss_pred CCCCCCccccCCCCCCCCChhhhHHHhcccCCCCCCccccccceeeeecCCCcEEEEEeecCCCCCCHHHHHHHHHHHHh
Q 004278 203 GGGINETVEFMSPRDADGHGTHTASTAAGRHAFRASMEGYAAGVAKGVAPKARLAVYKVCWKNAGCFDSDILAAFDAAVN 282 (764)
Q Consensus 203 ~~~~~~~~~~~~~~D~~gHGThVAgi~AG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g~~~s~i~~ai~~A~~ 282 (764)
..+.|..||||||||||+|.. .||||+|+|+.+|++++...+..++++++|+|+++
T Consensus 62 ----------~~~~d~~gHGT~vAgiiag~~--------------~GvAp~a~l~~~~v~~~~~~~~~~~~~~ai~~~~~ 117 (276)
T 4dzt_A 62 ----------GNGQDCNGHGTHVAGTIGGVT--------------YGVAKAVNLYAVRVLDCNGSGSTSGVIAGVDWVTR 117 (276)
T ss_dssp ----------SCSCCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHH
T ss_pred ----------CCCCCCCCCHHHHHHHHHccc--------------cCCCCCCEEEEEEEeCCCCCcCHHHHHHHHHHHHh
Confidence 234678899999999999872 59999999999999988734788899999999998
Q ss_pred C--CCcEEEeccCCCCCCCCCCCCCHHHHHHHHhhcCCcEEEEecCCCCCCCCc-cccCCCceEEecCCccCCccceEEE
Q 004278 283 D--GVDVISISIGGGDGISSPYYLDPIAIGSYGAASRGVFVSSSAGNDGPNGMS-VTNLAPWIVTVGAGTIDRNFPAEVR 359 (764)
Q Consensus 283 ~--gvdVIn~SlG~~~g~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~-~~~~~p~vitVgAst~d~~~~~~~~ 359 (764)
. +++|||||||.. ....+..++.++.++|+++|+||||+|..... .+...|++|+|||.+
T Consensus 118 ~~~~~~vin~S~g~~-------~~~~~~~a~~~a~~~gvlvv~AAGN~g~~~~~~~Pa~~~~vi~Vga~~---------- 180 (276)
T 4dzt_A 118 NHRRPAVANMSLGGG-------VSTALDNAVKNSIAAGVVYAVAAGNDNANACNYSPARVAEALTVGATT---------- 180 (276)
T ss_dssp HCCSSEEEEECCCEE-------CCHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEEC----------
T ss_pred cCCCCeEEEECCCCC-------CCHHHHHHHHHHHhCCCEEEEECCCCCCCCCCcCcccCCCEEEEEEEC----------
Confidence 7 999999999987 24678888889999999999999999976544 377889999999832
Q ss_pred eCCCeEEEeEEeecCCCCCCceeeEEecCCCCccccccccCCCCCCCccceeEEEEecCCCchhhHHHHHHHcCceEEEE
Q 004278 360 LGDGRRLSGVSLYAGAPLSEKMYPLIYPGKSGVLSASLCMENSLDPNLVRGKIVICDRGSSPRVAKGLVVKKAGGVGMIL 439 (764)
Q Consensus 360 ~~~g~~~~g~~~~~~~~~~~~~~plv~~~~~~~~~~~~C~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~i~ 439 (764)
T Consensus 181 -------------------------------------------------------------------------------- 180 (276)
T 4dzt_A 181 -------------------------------------------------------------------------------- 180 (276)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eccCCCCCcccHHHHHHHHHcCCCCeEEEEecceeecccCCCeeecccCCCCCCCCCCCCCCcEEcCCCcEEecccCCCC
Q 004278 440 ANGISNGEGLVGDAVKAYISSTANPTATIDFKGTILGIKPAPVVASFSARGPNGLNPEILKPDLIAPGVNILAAWTEAVG 519 (764)
Q Consensus 440 ~n~~~~~~~~~~~~~~~y~~~~~~~~~~i~~~~t~~~~~~~~~~a~fSS~Gp~~~~~~~lKPDI~APG~~I~sa~~~~~~ 519 (764)
..+.++.||++||. +||+|||++|++++.....
T Consensus 181 ---------------------------------------~~~~~~~~S~~g~~--------~dv~ApG~~i~s~~~~~~~ 213 (276)
T 4dzt_A 181 ---------------------------------------SSDARASFSNYGSC--------VDLFAPGASIPSAWYTSDT 213 (276)
T ss_dssp ---------------------------------------TTSBBCTTCCBSTT--------CCEEEECSSEEEECTTSSS
T ss_pred ---------------------------------------CCCCcCCcCCCCCC--------ceEEeCCCCeEccccCCCC
Confidence 12367899999996 5999999999999876533
Q ss_pred CCCCCCCCccceeEEeccccchhhhHHHHHHHHhhhCCCCCHHHHHHHHHhcccccc
Q 004278 520 PTGLDSDLRKTEFNILSGTSMACPHVSGAAALLKSAHPDWSPAAIRSAMMTTASIVD 576 (764)
Q Consensus 520 ~~~~~~~~~~~~y~~~sGTSmAaP~VAGvaALl~~~~P~~sp~~ik~~L~~TA~~~~ 576 (764)
.|..++|||||||||||++|||+|++|++++++||++|++||++..
T Consensus 214 -----------~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~ 259 (276)
T 4dzt_A 214 -----------ATQTLNGTSMATPHVAGVAALYLEQNPSATPASVASAILNGATTGR 259 (276)
T ss_dssp -----------CEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEESC
T ss_pred -----------ceEEeeEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCcCCc
Confidence 7999999999999999999999999999999999999999999864
No 27
>2b6n_A Proteinase K; S binding, substrate specificity, proteinase K, subtilase, psychrotrophic, psychrophilic, hydrolase; 1.80A {Serratia SP}
Probab=100.00 E-value=2.3e-46 Score=395.51 Aligned_cols=236 Identities=31% Similarity=0.410 Sum_probs=199.0
Q ss_pred CCccCCCCCCCcEEEEEecCCCCCCCCccCCCCCCCCCcceeeeecccccCcccCCceeeeeeeccccccccCCCCCCCC
Q 004278 124 GLWSESDYGSDVIIGVFDTGIWPERRSFSDLNIGSIPSKWKGVCQVGVKFTAKNCNKKIIGARFFSKGHEAAGGSAGPIG 203 (764)
Q Consensus 124 ~~~~~~~~G~gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~g~~~~~~~~~~~~ 203 (764)
.+|..+++|+||+|+|||||||++||+|.++ +...++|.++
T Consensus 22 ~~~~~~~~G~gv~VaViDtGid~~Hpdl~~~---------------------------~~~~~d~~~~------------ 62 (278)
T 2b6n_A 22 NNYHTDYDGSGVTAFVIDTGVLNTHNEFGGR---------------------------ASSGYDFIDN------------ 62 (278)
T ss_dssp SEEECSCCCTTCEEEEEESCCCTTCGGGTTC---------------------------EEEEEETTTT------------
T ss_pred hhcccCCCCCCCEEEEEeCCCCCCChhHhcc---------------------------cccCeecCCC------------
Confidence 5799999999999999999999999999742 2223333321
Q ss_pred CCCCCccccCCCCCCCCChhhhHHHhcccCCCCCCccccccceeeeecCCCcEEEEEeecCCCCCCHHHHHHHHHHHHh-
Q 004278 204 GGINETVEFMSPRDADGHGTHTASTAAGRHAFRASMEGYAAGVAKGVAPKARLAVYKVCWKNAGCFDSDILAAFDAAVN- 282 (764)
Q Consensus 204 ~~~~~~~~~~~~~D~~gHGThVAgi~AG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g~~~s~i~~ai~~A~~- 282 (764)
...+.|..||||||||||+|+. .||||+|+|+.+|++++.+.+..+++++||+|+++
T Consensus 63 --------~~~~~d~~gHGT~vAgiia~~~--------------~GvAp~a~i~~~~v~~~~g~~~~~~~~~ai~~a~~~ 120 (278)
T 2b6n_A 63 --------DYDATDCNGHGTHVAGTIGGST--------------YGVAKNVNVVGVRVLNCSGSGSNSGVIAGINWVKNN 120 (278)
T ss_dssp --------BSCCCCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHH
T ss_pred --------CCCCCCCCCcHHHHHHHHHCCC--------------cCCCCCCeEEEEEEECCCCCccHHHHHHHHHHHHhC
Confidence 1235688999999999999862 59999999999999987734788899999999997
Q ss_pred -CCCcEEEeccCCCCCCCCCCCCCHHHHHHHHhhcCCcEEEEecCCCCCCCC-ccccCCCceEEecCCccCCccceEEEe
Q 004278 283 -DGVDVISISIGGGDGISSPYYLDPIAIGSYGAASRGVFVSSSAGNDGPNGM-SVTNLAPWIVTVGAGTIDRNFPAEVRL 360 (764)
Q Consensus 283 -~gvdVIn~SlG~~~g~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~-~~~~~~p~vitVgAst~d~~~~~~~~~ 360 (764)
.+++|||||||.. . ...+..++.++.++|++||+||||+|.... ..+...|++|+|||.+.
T Consensus 121 ~~g~~Vin~S~G~~---~----~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~---------- 183 (278)
T 2b6n_A 121 ASGPAVANMSLGGG---A----SQATDDAVNAAVAAGITFVVAAGNDNSNACNYSPARAADAITVGSTTS---------- 183 (278)
T ss_dssp CCSSEEEEECCCEE---C----CHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECT----------
T ss_pred CCCCeEEEECCCCC---c----CHHHHHHHHHHHHCCCEEEEEeCCCCCCCCCcCcccCCCeEEEEeeCC----------
Confidence 5999999999987 2 456778888899999999999999997654 35778899999998421
Q ss_pred CCCeEEEeEEeecCCCCCCceeeEEecCCCCccccccccCCCCCCCccceeEEEEecCCCchhhHHHHHHHcCceEEEEe
Q 004278 361 GDGRRLSGVSLYAGAPLSEKMYPLIYPGKSGVLSASLCMENSLDPNLVRGKIVICDRGSSPRVAKGLVVKKAGGVGMILA 440 (764)
Q Consensus 361 ~~g~~~~g~~~~~~~~~~~~~~plv~~~~~~~~~~~~C~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~i~~ 440 (764)
T Consensus 184 -------------------------------------------------------------------------------- 183 (278)
T 2b6n_A 184 -------------------------------------------------------------------------------- 183 (278)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCCCCCcccHHHHHHHHHcCCCCeEEEEecceeecccCCCeeecccCCCCCCCCCCCCCCcEEcCCCcEEecccCCCCC
Q 004278 441 NGISNGEGLVGDAVKAYISSTANPTATIDFKGTILGIKPAPVVASFSARGPNGLNPEILKPDLIAPGVNILAAWTEAVGP 520 (764)
Q Consensus 441 n~~~~~~~~~~~~~~~y~~~~~~~~~~i~~~~t~~~~~~~~~~a~fSS~Gp~~~~~~~lKPDI~APG~~I~sa~~~~~~~ 520 (764)
.+.++.||++||. |||+|||++|++++.....
T Consensus 184 ---------------------------------------~~~~~~~S~~G~~--------~di~ApG~~i~s~~~~~~~- 215 (278)
T 2b6n_A 184 ---------------------------------------NDSRSSFSNYGTC--------LDIYAPGSSITSSWYTSNS- 215 (278)
T ss_dssp ---------------------------------------TSBBCTTCCBSTT--------CCEEEECSSEEEECTTSTT-
T ss_pred ---------------------------------------CCCcCCcCCCCCC--------CeEEeCCCCeECcccCCCC-
Confidence 1257899999985 6999999999999875322
Q ss_pred CCCCCCCccceeEEeccccchhhhHHHHHHHHhhhCCCCCHHHHHHHHHhccccc
Q 004278 521 TGLDSDLRKTEFNILSGTSMACPHVSGAAALLKSAHPDWSPAAIRSAMMTTASIV 575 (764)
Q Consensus 521 ~~~~~~~~~~~y~~~sGTSmAaP~VAGvaALl~~~~P~~sp~~ik~~L~~TA~~~ 575 (764)
.|..++|||||||||||++|||+|++|+|+++|||++|++||++.
T Consensus 216 ----------~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~ 260 (278)
T 2b6n_A 216 ----------ATNTISGTSMASPHVAGVAALYLDENPNLSPAQVTNLLKTRATAD 260 (278)
T ss_dssp ----------CEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEES
T ss_pred ----------CEEEeCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccC
Confidence 799999999999999999999999999999999999999999875
No 28
>2pwa_A Proteinase K; structure, alanine boronic acid, hydrolase; 0.83A {Engyodontium album} SCOP: c.41.1.1 PDB: 1p7v_A 1p7w_A 2dqk_A 2duj_A 2g4v_A 2hd4_A 2hpz_A 2id8_A 2pq2_A 1ic6_A 2pwb_A* 2pyz_A* 2v8b_A 3aj8_A 3aj9_A 3dyb_A* 3gt3_A* 3gt4_A* 3l1k_A 3osz_A ...
Probab=100.00 E-value=6.8e-47 Score=399.14 Aligned_cols=227 Identities=33% Similarity=0.432 Sum_probs=193.6
Q ss_pred ccCCCCCCCcEEEEEecCCCCCCCCccCCCCCCCCCcceeeeecccccCcccCCceeeeeeeccccccccCCCCCCCCCC
Q 004278 126 WSESDYGSDVIIGVFDTGIWPERRSFSDLNIGSIPSKWKGVCQVGVKFTAKNCNKKIIGARFFSKGHEAAGGSAGPIGGG 205 (764)
Q Consensus 126 ~~~~~~G~gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~g~~~~~~~~~~~~~~ 205 (764)
|+ ..+|+||+|+|||||||++||+|.++ +...++|..
T Consensus 25 ~~-~~~G~gv~VaViDsGvd~~H~~l~~~---------------------------~~~~~~~~~--------------- 61 (279)
T 2pwa_A 25 YD-ESAGQGSCVYVIDTGIEASHPEFEGR---------------------------AQMVKTYYY--------------- 61 (279)
T ss_dssp CC-TTTTTTEEEEEEESCCCTTCGGGTTC---------------------------EEEEEESSS---------------
T ss_pred cc-CCCCCCCEEEEEeCCCCCCChhHhCc---------------------------cccccCCCC---------------
Confidence 44 36899999999999999999999742 222233321
Q ss_pred CCCccccCCCCCCCCChhhhHHHhcccCCCCCCccccccceeeeecCCCcEEEEEeecCCCCCCHHHHHHHHHHHHhCCC
Q 004278 206 INETVEFMSPRDADGHGTHTASTAAGRHAFRASMEGYAAGVAKGVAPKARLAVYKVCWKNAGCFDSDILAAFDAAVNDGV 285 (764)
Q Consensus 206 ~~~~~~~~~~~D~~gHGThVAgi~AG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g~~~s~i~~ai~~A~~~gv 285 (764)
.+.|..||||||||||+|+. .||||+|+|+.+|++++.+.++.+++++||+|++++++
T Consensus 62 --------~~~d~~gHGT~vAgiia~~~--------------~GvAp~a~i~~~~v~~~~g~~~~~~~~~ai~~a~~~~~ 119 (279)
T 2pwa_A 62 --------SSRDGNGHGTHCAGTVGSRT--------------YGVAKKTQLFGVKVLDDNGSGQYSTIIAGMDFVASDKN 119 (279)
T ss_dssp --------CSSCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHHGG
T ss_pred --------CCCCCCCCHHHHHHHHHhcc--------------cccCCCCEEEEEEeEcCCCCcCHHHHHHHHHHHHhcCc
Confidence 24568899999999999862 59999999999999988733788999999999999987
Q ss_pred -------cEEEeccCCCCCCCCCCCCCHHHHHHHHhhcCCcEEEEecCCCCCCCC-ccccCCCceEEecCCccCCccceE
Q 004278 286 -------DVISISIGGGDGISSPYYLDPIAIGSYGAASRGVFVSSSAGNDGPNGM-SVTNLAPWIVTVGAGTIDRNFPAE 357 (764)
Q Consensus 286 -------dVIn~SlG~~~g~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~-~~~~~~p~vitVgAst~d~~~~~~ 357 (764)
+|||||||.. ..+.+..++.++.++|++||+||||+|.... .++...|++|+|||.+.
T Consensus 120 ~~~~~~~~Vin~S~G~~-------~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~------- 185 (279)
T 2pwa_A 120 NRNCPKGVVASLSLGGG-------YSSSVNSAAARLQSSGVMVAVAAGNNNADARNYSPASEPSVCTVGASDR------- 185 (279)
T ss_dssp GSCCTTEEEEEECCCEE-------CCHHHHHHHHHHHHTTEEEEEECCSSSSBGGGEETTTCTTSEEEEEECT-------
T ss_pred cccCCCccEEEecCCCC-------CCHHHHHHHHHHHHCCCEEEEECCCCCCcCCCcCcccCCcEEEEEEecC-------
Confidence 9999999976 2467888888899999999999999997653 45778899999998421
Q ss_pred EEeCCCeEEEeEEeecCCCCCCceeeEEecCCCCccccccccCCCCCCCccceeEEEEecCCCchhhHHHHHHHcCceEE
Q 004278 358 VRLGDGRRLSGVSLYAGAPLSEKMYPLIYPGKSGVLSASLCMENSLDPNLVRGKIVICDRGSSPRVAKGLVVKKAGGVGM 437 (764)
Q Consensus 358 ~~~~~g~~~~g~~~~~~~~~~~~~~plv~~~~~~~~~~~~C~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~ 437 (764)
T Consensus 186 -------------------------------------------------------------------------------- 185 (279)
T 2pwa_A 186 -------------------------------------------------------------------------------- 185 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEeccCCCCCcccHHHHHHHHHcCCCCeEEEEecceeecccCCCeeecccCCCCCCCCCCCCCCcEEcCCCcEEecccCC
Q 004278 438 ILANGISNGEGLVGDAVKAYISSTANPTATIDFKGTILGIKPAPVVASFSARGPNGLNPEILKPDLIAPGVNILAAWTEA 517 (764)
Q Consensus 438 i~~n~~~~~~~~~~~~~~~y~~~~~~~~~~i~~~~t~~~~~~~~~~a~fSS~Gp~~~~~~~lKPDI~APG~~I~sa~~~~ 517 (764)
.+.++.||++||. |||+|||++|+++++.+
T Consensus 186 ------------------------------------------~~~~~~~S~~G~~--------~di~APG~~i~s~~~~~ 215 (279)
T 2pwa_A 186 ------------------------------------------YDRRSSFSNYGSV--------LDIFGPGTDILSTWIGG 215 (279)
T ss_dssp ------------------------------------------TSBBCTTCCBSTT--------CCEEEECSSEEEEETTT
T ss_pred ------------------------------------------CCCcCCcCCCCCc--------ceEEEecCCeEEeecCC
Confidence 1367899999996 69999999999998875
Q ss_pred CCCCCCCCCCccceeEEeccccchhhhHHHHHHHHhhhCCCCCHHHHHHHHHhccccc
Q 004278 518 VGPTGLDSDLRKTEFNILSGTSMACPHVSGAAALLKSAHPDWSPAAIRSAMMTTASIV 575 (764)
Q Consensus 518 ~~~~~~~~~~~~~~y~~~sGTSmAaP~VAGvaALl~~~~P~~sp~~ik~~L~~TA~~~ 575 (764)
.|..++|||||||||||++|||+|+ |++++.|||++|++||++.
T Consensus 216 -------------~~~~~sGTS~AaP~VaG~aAll~~~-p~lt~~~v~~~L~~tA~~~ 259 (279)
T 2pwa_A 216 -------------STRSISGTSMATPHVAGLAAYLMTL-GKTTAASACRYIADTANKG 259 (279)
T ss_dssp -------------EEEEECSHHHHHHHHHHHHHHHHHT-TSCCTTTHHHHHHHHSEES
T ss_pred -------------CEEEcCChHHHHHHHHHHHHHHHhC-CCCCHHHHHHHHHHhCccc
Confidence 7999999999999999999999999 9999999999999999975
No 29
>2oxa_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria} PDB: 3hjr_A
Probab=100.00 E-value=4.9e-47 Score=442.11 Aligned_cols=299 Identities=23% Similarity=0.228 Sum_probs=204.8
Q ss_pred CCCccCCCCCCCcEEEEEecCCCCCCCCccCCCCCCCCCcceeeeecccccCcccCCceeeeeeeccccccccCCCCCCC
Q 004278 123 QGLWSESDYGSDVIIGVFDTGIWPERRSFSDLNIGSIPSKWKGVCQVGVKFTAKNCNKKIIGARFFSKGHEAAGGSAGPI 202 (764)
Q Consensus 123 ~~~~~~~~~G~gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~g~~~~~~~~~~~ 202 (764)
..+|..+++|+||+|||||||||++||+|.+.- +.+.++|..+.
T Consensus 60 ~~aw~~g~~G~gV~VaViDtGid~~Hpdl~~~~--------------------------~~~~~~~~~~~---------- 103 (600)
T 2oxa_A 60 WWAHRTGVLGHGVNVAVVDDGLAIAHPDLADNV--------------------------RPGSKNVVTGS---------- 103 (600)
T ss_dssp HHHHHTTCSCTTCEEEEESSCCCTTCTTTGGGB--------------------------CSCCBCTTTCS----------
T ss_pred HHHHhcCCCCCCcEEEEecCCcCCCCcchhhcc--------------------------ccCceeccCCC----------
Confidence 458999999999999999999999999997431 11223333211
Q ss_pred CCCCCCccccCCCCC-CCCChhhhHHHhcccCCCCCCccccccceeeeecCCCcEEEEEeecCCCCCC-H-HHHHHHHHH
Q 004278 203 GGGINETVEFMSPRD-ADGHGTHTASTAAGRHAFRASMEGYAAGVAKGVAPKARLAVYKVCWKNAGCF-D-SDILAAFDA 279 (764)
Q Consensus 203 ~~~~~~~~~~~~~~D-~~gHGThVAgi~AG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g~~-~-s~i~~ai~~ 279 (764)
....|.| ..||||||||||||. .++.+ +.||||+|+|+.+|+++.. +.. . ..+++....
T Consensus 104 --------~d~~p~d~~~gHGT~vAGiiaa~-~n~~g--------~~GVAp~A~l~~vkv~~~~-~~~~~~~~~~~~~~~ 165 (600)
T 2oxa_A 104 --------DDPTPTDPDTGHGTSVSGIIAAV-DNAIG--------TKGIAPRAQLQGFNLLDDN-SQQLQKDWLYALGDS 165 (600)
T ss_dssp --------SCCCCCSTTCCHHHHHHHHHHCC-SSSSS--------CCCSSTTCEEEEECTTSTT-CCCCHHHHHHHTTTS
T ss_pred --------CCCCCCCCCCCCccHHHHHhhcc-cCCCc--------ceEEccCCceEEEeeecCc-ccchHHHHHHHHhhh
Confidence 1123444 789999999999998 44332 4799999999999999877 433 2 344454445
Q ss_pred HHhCCCcEEEeccCCCCCCCCCCCCC----HHHHHHHH---hhcCCcEEEEecCCCCCCCC-------------------
Q 004278 280 AVNDGVDVISISIGGGDGISSPYYLD----PIAIGSYG---AASRGVFVSSSAGNDGPNGM------------------- 333 (764)
Q Consensus 280 A~~~gvdVIn~SlG~~~g~~~~~~~~----~~~~a~~~---a~~~Gi~vV~AAGN~G~~~~------------------- 333 (764)
+..++++|||||||... ......+ .+..++.. +.++|++||+||||+|....
T Consensus 166 a~~~~~~Vin~S~G~~~--~~~~~~~~~~~~~~~~~~~~~~a~~~GilvV~AAGN~g~~~~~~~~~~~Pa~~~~~~p~~~ 243 (600)
T 2oxa_A 166 NASRDNRVFNHSYRMSV--VDPRSANSLDQSQLDRLFEQQTLKAQGAAYIKAAGNGFNKIAAGGYVLNRTGNGPKLPFEN 243 (600)
T ss_dssp HHHHTCSEEEECCCCCC--SSCCCSCSHHHHHHHHHHHHHHHSTTCCEEEEECCSCSSEEEETTEEEEEESCSSCCCSSB
T ss_pred hcccCCeEEEEeccCCC--CCccccCchhHHHHHHHHHHHHhccCCcEEEEecCCCCccCCCCcceecCccccccccccc
Confidence 77889999999999873 1111222 22222222 55789999999999986421
Q ss_pred ---ccccCCCceEEecCCccCCccceEEEeCCCeEEEeEEeecCCCCCCceeeEEecCCCCccccccccCCCCCCCccce
Q 004278 334 ---SVTNLAPWIVTVGAGTIDRNFPAEVRLGDGRRLSGVSLYAGAPLSEKMYPLIYPGKSGVLSASLCMENSLDPNLVRG 410 (764)
Q Consensus 334 ---~~~~~~p~vitVgAst~d~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~plv~~~~~~~~~~~~C~~~~~~~~~~~g 410 (764)
...+.++|+|+|||.+
T Consensus 244 ~n~~~~~~s~~vItVgA~~------------------------------------------------------------- 262 (600)
T 2oxa_A 244 SNLDPSNSNFWNLVVSALN------------------------------------------------------------- 262 (600)
T ss_dssp TTSSGGGGSSSEEEEEEEC-------------------------------------------------------------
T ss_pred cccCCcccCceeEEEeccc-------------------------------------------------------------
Confidence 1122345566666621
Q ss_pred eEEEEecCCCchhhHHHHHHHcCceEEEEeccCCCCCcccHHHHHHHHHcCCCCeEEEEecceeecccCCCeeecccCCC
Q 004278 411 KIVICDRGSSPRVAKGLVVKKAGGVGMILANGISNGEGLVGDAVKAYISSTANPTATIDFKGTILGIKPAPVVASFSARG 490 (764)
Q Consensus 411 kivl~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~y~~~~~~~~~~i~~~~t~~~~~~~~~~a~fSS~G 490 (764)
..+.++.||++|
T Consensus 263 --------------------------------------------------------------------~~g~~a~fS~~G 274 (600)
T 2oxa_A 263 --------------------------------------------------------------------ADGVRSSYSSVG 274 (600)
T ss_dssp --------------------------------------------------------------------TTSSBCTTCCBC
T ss_pred --------------------------------------------------------------------CCCCcCCcCCCC
Confidence 223689999999
Q ss_pred CCCCCCCCCCCcEEcCCCcEEecccC-------CCCC--------------CCCCCCCccceeEEeccccchhhhHHHHH
Q 004278 491 PNGLNPEILKPDLIAPGVNILAAWTE-------AVGP--------------TGLDSDLRKTEFNILSGTSMACPHVSGAA 549 (764)
Q Consensus 491 p~~~~~~~lKPDI~APG~~I~sa~~~-------~~~~--------------~~~~~~~~~~~y~~~sGTSmAaP~VAGva 549 (764)
|+. ||+|||++|.++.+. +... .....+.....|..++|||||||||||++
T Consensus 275 ~~v--------dv~APG~~i~~~~p~i~ttd~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~sGTS~AaP~VAGva 346 (600)
T 2oxa_A 275 SNI--------FLSATGGEYGTDTPAMVTTDLPGCDMGYNRTDDPSTNRLHGNSQLDASCDYNGVMNGTSSATPSTSGAM 346 (600)
T ss_dssp TTE--------EEEEECCSCSSSSCCEEEECCSSTTSSSSSTTSCCSSTTTTCTTTCTTCCEEEEECSHHHHHHHHHHHH
T ss_pred CCe--------EEEeccCCCCcCCCceEeccccccccccccccccccccccccccccCCcccccccccchHHhHHHHHHH
Confidence 974 999999996544332 1000 00001112235899999999999999999
Q ss_pred HHHhhhCCCCCHHHHHHHHHhccccccCCCCCCC-----------------cc--CCCCCCCCCCCCCCcccccccCCCC
Q 004278 550 ALLKSAHPDWSPAAIRSAMMTTASIVDNSNQPMT-----------------DE--ATGNASTPYDFGAGHVNLDRAMDPG 610 (764)
Q Consensus 550 ALl~~~~P~~sp~~ik~~L~~TA~~~~~~~~~~~-----------------~~--~~~~~~~~~~~G~G~vn~~~Al~~g 610 (764)
|||+|++|+|+|++||++|++||++++..+.++. +. ........+.||||+||+.+|++..
T Consensus 347 ALl~s~~P~lt~~~vk~~L~~tA~~~~~~~~~~~~~~~~~~G~~~~~~~~~~w~~n~~g~~~~~~~G~G~vda~~Av~~A 426 (600)
T 2oxa_A 347 ALLMSAYPDLSVRDLRDLLARSATRVDAKHQPVMVSYTSSTGKVRDVKGLEGWERNAAGMWFSPTYGFGLIDVNKALELA 426 (600)
T ss_dssp HHHHHHSTTSCHHHHHHHHHHHCBCCSTTCCCEEEEEECTTSCEEEEEEECCSEECTTSCEEBTTTBTCBCCHHHHHHHH
T ss_pred HHHHHhCCCCCHHHHHHHHHHhCccCCcccccccccccccccccccccccccccccCCCccccccCCCchhhHHHHHHHH
Confidence 9999999999999999999999999865442211 00 0111223578999999999999865
Q ss_pred ceec
Q 004278 611 LVYD 614 (764)
Q Consensus 611 lv~d 614 (764)
..+.
T Consensus 427 ~~~~ 430 (600)
T 2oxa_A 427 ANHQ 430 (600)
T ss_dssp TTCC
T ss_pred Hhcc
Confidence 5443
No 30
>1p8j_A Furin precursor; prohormone convertase, SPC1, PACE, P-domain; HET: DKA AR7 NAG FUL BMA MAN GAL FUC; 2.60A {Mus musculus} SCOP: b.18.1.20 c.41.1.1
Probab=100.00 E-value=1e-45 Score=418.93 Aligned_cols=295 Identities=15% Similarity=0.118 Sum_probs=213.8
Q ss_pred CCCccCCCCCCCcEEEEEecCCCCCCCCccCCCCCCCCCcceeeeecccccCcccCCceeeeeeeccccccccCCCCCCC
Q 004278 123 QGLWSESDYGSDVIIGVFDTGIWPERRSFSDLNIGSIPSKWKGVCQVGVKFTAKNCNKKIIGARFFSKGHEAAGGSAGPI 202 (764)
Q Consensus 123 ~~~~~~~~~G~gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~g~~~~~~~~~~~ 202 (764)
..+|..+++|+||+|||||||||++||+|.++-.. ...++|.+. +.+
T Consensus 28 ~~aw~~g~~G~gv~VaViDtGvd~~Hpdl~~~~~~-------------------------~~~~d~~~~------~~~-- 74 (471)
T 1p8j_A 28 KEAWAQGFTGHGIVVSILDDGIEKNHPDLAGNYDP-------------------------GASFDVNDQ------DPD-- 74 (471)
T ss_dssp HHHHHTTCSCTTCEEEEEEBCCCTTCTTTGGGBCG-------------------------GGCEETTTT------BSC--
T ss_pred HHHHhcCCCCCCCEEEEEeCCcCCCChhHhhccCc-------------------------cCcccccCC------CCC--
Confidence 46899999999999999999999999999753100 011222221 000
Q ss_pred CCCCCCccccCCCCCCCCChhhhHHHhcccCCCCCCccccccceeeeecCCCcEEEEEeecCCCCCCHHHHHHHHHHHHh
Q 004278 203 GGGINETVEFMSPRDADGHGTHTASTAAGRHAFRASMEGYAAGVAKGVAPKARLAVYKVCWKNAGCFDSDILAAFDAAVN 282 (764)
Q Consensus 203 ~~~~~~~~~~~~~~D~~gHGThVAgi~AG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g~~~s~i~~ai~~A~~ 282 (764)
+.+...+.|..+|||||||||||...++.+ +.||||+|+|+.+|+++ +..+++++||+++++
T Consensus 75 ------p~~~~~~~d~~gHGT~vAGiiaa~~~n~~g--------~~GvAp~a~i~~~rv~~----g~~~~~~~ai~~a~~ 136 (471)
T 1p8j_A 75 ------PQPRYTQMNDNRHGTRCAGEVAAVANNGVC--------GVGVAYNARIGGVRMLD----GEVTDAVEARSLGLN 136 (471)
T ss_dssp ------CCCCCCTTCTTCHHHHHHHHHHCCSSSSSS--------CCCTTTTSEEEEEECSS----SCCCHHHHHHHHTSC
T ss_pred ------CCCccCCCCCCCcHHHHHHHHHeeccCCCC--------CEEECCCCeEEEEEccC----CchhHHHHHHHhhhc
Confidence 111124568899999999999997655432 37999999999999985 346789999999999
Q ss_pred -CCCcEEEeccCCCCCC-CCCCCCCHHHHHHHHhhc-----CCcEEEEecCCCCCCCCc----cccCCCceEEecCCccC
Q 004278 283 -DGVDVISISIGGGDGI-SSPYYLDPIAIGSYGAAS-----RGVFVSSSAGNDGPNGMS----VTNLAPWIVTVGAGTID 351 (764)
Q Consensus 283 -~gvdVIn~SlG~~~g~-~~~~~~~~~~~a~~~a~~-----~Gi~vV~AAGN~G~~~~~----~~~~~p~vitVgAst~d 351 (764)
++++|||||||..... ........+..++.++.+ +|++||+||||+|..... ....+|++|+|||.+.
T Consensus 137 ~~~~~Vin~S~G~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~GvlvV~AAGN~g~~~~~~~~~~~~~~~~vItVgA~~~- 215 (471)
T 1p8j_A 137 PNHIHIYSASWGPEDDGKTVDGPARLAEEAFFRGVSQGRGGLGSIFVWASGNGGREHDSCNCDGYTNSIYTLSISSATQ- 215 (471)
T ss_dssp TTTCCEEEECCBSCCSSSCCBCCCHHHHHHHHHHHHHHHHHTCCEEEEECCSCGGGTCBGGGBTTTTSTTEEEEEEECT-
T ss_pred cCCCeEEEeccCcCCCCCcccCcHHHHHHHHHHHHHhhccCCCeEEEEeCCCCCCCCCCcCcCcccCCCceEEEecccC-
Confidence 9999999999986210 001112234455555543 699999999999976322 1234589999998421
Q ss_pred CccceEEEeCCCeEEEeEEeecCCCCCCceeeEEecCCCCccccccccCCCCCCCccceeEEEEecCCCchhhHHHHHHH
Q 004278 352 RNFPAEVRLGDGRRLSGVSLYAGAPLSEKMYPLIYPGKSGVLSASLCMENSLDPNLVRGKIVICDRGSSPRVAKGLVVKK 431 (764)
Q Consensus 352 ~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~plv~~~~~~~~~~~~C~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~ 431 (764)
T Consensus 216 -------------------------------------------------------------------------------- 215 (471)
T 1p8j_A 216 -------------------------------------------------------------------------------- 215 (471)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCceEEEEeccCCCCCcccHHHHHHHHHcCCCCeEEEEecceeecccCCCeeecccCCCCCCCCCCCCCCcEEcCCCcEE
Q 004278 432 AGGVGMILANGISNGEGLVGDAVKAYISSTANPTATIDFKGTILGIKPAPVVASFSARGPNGLNPEILKPDLIAPGVNIL 511 (764)
Q Consensus 432 ~Ga~g~i~~n~~~~~~~~~~~~~~~y~~~~~~~~~~i~~~~t~~~~~~~~~~a~fSS~Gp~~~~~~~lKPDI~APG~~I~ 511 (764)
.+.++.||++||... ...+|...+||.+|+
T Consensus 216 ------------------------------------------------~g~~a~~S~~g~~~~--~~~~~~~~~~g~~i~ 245 (471)
T 1p8j_A 216 ------------------------------------------------FGNVPWYSEACSSTL--ATTYSSGNQNEKQIV 245 (471)
T ss_dssp ------------------------------------------------TSCCCTTCCBCTTCC--EEEECCCSTTSCCEE
T ss_pred ------------------------------------------------CCCcccccCCCCcce--EEeCCCCCCCCCCEE
Confidence 135789999999853 333455555567999
Q ss_pred ecccCCCCCCCCCCCCccceeEEeccccchhhhHHHHHHHHhhhCCCCCHHHHHHHHHhccccccCCCCCCCccCCCCCC
Q 004278 512 AAWTEAVGPTGLDSDLRKTEFNILSGTSMACPHVSGAAALLKSAHPDWSPAAIRSAMMTTASIVDNSNQPMTDEATGNAS 591 (764)
Q Consensus 512 sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAGvaALl~~~~P~~sp~~ik~~L~~TA~~~~~~~~~~~~~~~~~~~ 591 (764)
++...+ ..|..++|||||||||||++|||+|++|+|++++||++|++||++++.....+.... ....
T Consensus 246 st~~~~------------~~~~~~sGTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~~~~~~~~~~~~n~-~g~~ 312 (471)
T 1p8j_A 246 TTDLRQ------------KCTESHTGTSASAPLAAGIIALTLEANKNLTWRDMQHLVVQTSKPAHLNADDWATNG-VGRK 312 (471)
T ss_dssp EEETTT------------EEEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBCTTCCCSCCEECT-TSCE
T ss_pred EeeCCC------------CccccCCCcccccchhhhHHHHHHhhCCCCCHHHHHHHHHhcCccCCCCCCCceecC-CCcc
Confidence 987643 269999999999999999999999999999999999999999998865433222211 1112
Q ss_pred CCCCCCCCcccccccCCCCce
Q 004278 592 TPYDFGAGHVNLDRAMDPGLV 612 (764)
Q Consensus 592 ~~~~~G~G~vn~~~Al~~glv 612 (764)
....||+|+||+.+|++....
T Consensus 313 ~~~~~G~G~vda~~Av~~a~~ 333 (471)
T 1p8j_A 313 VSHSYGYGLLDAGAMVALAQN 333 (471)
T ss_dssp EBTTTBTCBCCHHHHHHHHHT
T ss_pred cCCCCCCEEEcHhHHHHHhhc
Confidence 346899999999999985443
No 31
>2qtw_B Proprotein convertase subtilisin/kexin type 9; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_B 3bps_A 3gcw_A 3gcx_A 3p5b_A 3p5c_A 2pmw_B 3h42_B 2w2n_A 2w2m_A 2w2p_A 2w2q_A 2xtj_A 2w2o_A
Probab=100.00 E-value=1.7e-45 Score=413.29 Aligned_cols=279 Identities=24% Similarity=0.257 Sum_probs=200.7
Q ss_pred CccCCCCCCCcEEEEEecCCCCCCCCccCCCCCCCCCcceeeeecccccCcccCCceeeeeeeccccccccCCCCCCCCC
Q 004278 125 LWSESDYGSDVIIGVFDTGIWPERRSFSDLNIGSIPSKWKGVCQVGVKFTAKNCNKKIIGARFFSKGHEAAGGSAGPIGG 204 (764)
Q Consensus 125 ~~~~~~~G~gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~g~~~~~~~~~~~~~ 204 (764)
.|..+.+|+||+|+|||||||++||+|.++- +.....+... .++
T Consensus 18 aw~~~~tG~GV~VaVIDTGId~~HpdL~gr~--------------------------~~~~~~~v~~---~dg------- 61 (546)
T 2qtw_B 18 EYQPPDGGSLVEVYLLDTSIQSDHREIEGRV--------------------------MVTDFENVPE---EDG------- 61 (546)
T ss_dssp ------CCTTSEEEEEESCCCTTSTTTTTTE--------------------------EEEEEECCCC---CC--------
T ss_pred hcccCCCCCCcEEEEECCCCCCCChHHcccc--------------------------cccCcccccC---CCC-------
Confidence 6888899999999999999999999997531 0100111100 000
Q ss_pred CCCCccccCCCCCCCCChhhhHHHhcccCCCCCCccccccceeeeecCCCcEEEEEeecCCCCCCHHHHHHHHHHHHhC-
Q 004278 205 GINETVEFMSPRDADGHGTHTASTAAGRHAFRASMEGYAAGVAKGVAPKARLAVYKVCWKNAGCFDSDILAAFDAAVND- 283 (764)
Q Consensus 205 ~~~~~~~~~~~~D~~gHGThVAgi~AG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g~~~s~i~~ai~~A~~~- 283 (764)
......+.|..||||||||||+|+. .||||+|+|+.+|++++.+.++.+++++||+|+++.
T Consensus 62 ----~~f~~~~~D~~GHGThVAGIIag~~--------------~GVAP~A~L~~vkVl~~~G~g~~s~ii~ai~~a~~~~ 123 (546)
T 2qtw_B 62 ----TRFHRQASKCDSHGTHLAGVVSGRD--------------AGVAKGASMRSLRVLNCQGKGTVSGTLIGLEFIRKSQ 123 (546)
T ss_dssp ----------CTTTTHHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTSEEEHHHHHHHHHHHHHHH
T ss_pred ----ccccCCCCCCCChHHHHHHHHhccC--------------CCcCCCCEEEEEEEECCCCCcCHHHHHHHHHHHHHhh
Confidence 0001245688999999999999873 499999999999999877236788999999999984
Q ss_pred -----CCcEEEeccCCCCCCCCCCCCCHHHHHHHHhhcCCcEEEEecCCCCCCCC-ccccCCCceEEecCCccCCccceE
Q 004278 284 -----GVDVISISIGGGDGISSPYYLDPIAIGSYGAASRGVFVSSSAGNDGPNGM-SVTNLAPWIVTVGAGTIDRNFPAE 357 (764)
Q Consensus 284 -----gvdVIn~SlG~~~g~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~-~~~~~~p~vitVgAst~d~~~~~~ 357 (764)
+++|||||||+. +...+..++.++.++|++||+||||+|.... .+++..|++|+|||++.+...
T Consensus 124 ~~~~~g~~VINmSlGg~-------~s~~l~~Ai~~A~~~GvlvVaAAGN~g~d~~~~sPAs~~~VItVGA~d~~g~~--- 193 (546)
T 2qtw_B 124 LVQPVGPLVVLLPLAGG-------YSRVLNAACQRLARAGVVLVTAAGNFRDDACLYSPASAPEVITVGATNAQDQP--- 193 (546)
T ss_dssp HHSCCSCEEEEECEEEE-------CCHHHHHHHHHHHHTTCEEEEECCSBSSBGGGEETTTCTTSEEEEEECTTSCB---
T ss_pred hhccCCCeEEEecCCCC-------CcHHHHHHHHHHHhCCCEEEEECCCCCCCCCccCcccCCCEEEEEEecCCCCc---
Confidence 899999999976 2467788888999999999999999997653 457788999999995322110
Q ss_pred EEeCCCeEEEeEEeecCCCCCCceeeEEecCCCCccccccccCCCCCCCccceeEEEEecCCCchhhHHHHHHHcCceEE
Q 004278 358 VRLGDGRRLSGVSLYAGAPLSEKMYPLIYPGKSGVLSASLCMENSLDPNLVRGKIVICDRGSSPRVAKGLVVKKAGGVGM 437 (764)
Q Consensus 358 ~~~~~g~~~~g~~~~~~~~~~~~~~plv~~~~~~~~~~~~C~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~ 437 (764)
T Consensus 194 -------------------------------------------------------------------------------- 193 (546)
T 2qtw_B 194 -------------------------------------------------------------------------------- 193 (546)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEeccCCCCCcccHHHHHHHHHcCCCCeEEEEecceeecccCCCeeecccCCCCCCCCCCCCCCcEEcCCCcEEecccCC
Q 004278 438 ILANGISNGEGLVGDAVKAYISSTANPTATIDFKGTILGIKPAPVVASFSARGPNGLNPEILKPDLIAPGVNILAAWTEA 517 (764)
Q Consensus 438 i~~n~~~~~~~~~~~~~~~y~~~~~~~~~~i~~~~t~~~~~~~~~~a~fSS~Gp~~~~~~~lKPDI~APG~~I~sa~~~~ 517 (764)
...-..||++|+. |||+|||++|+++++..
T Consensus 194 ------------------------------------------a~~s~~fSn~G~~--------vDI~APG~~I~St~~~~ 223 (546)
T 2qtw_B 194 ------------------------------------------VTLGTLGTNFGRC--------VDLFAPGEDIIGASSDC 223 (546)
T ss_dssp ------------------------------------------CEETTEECCBSTT--------CCEEEECSSEEEECTTS
T ss_pred ------------------------------------------ccccCCcCCCCCc--------ceEEecCccEEeeccCC
Confidence 0001228999984 79999999999998764
Q ss_pred CCCCCCCCCCccceeEEeccccchhhhHHHHHHHHhhhCCCCCHHHHHHHHHhccccccCCCCCCC--------ccCCCC
Q 004278 518 VGPTGLDSDLRKTEFNILSGTSMACPHVSGAAALLKSAHPDWSPAAIRSAMMTTASIVDNSNQPMT--------DEATGN 589 (764)
Q Consensus 518 ~~~~~~~~~~~~~~y~~~sGTSmAaP~VAGvaALl~~~~P~~sp~~ik~~L~~TA~~~~~~~~~~~--------~~~~~~ 589 (764)
.. .|..++|||||||||||++|||+|++|+|+|+|||++|++||.+..-....+. +.-...
T Consensus 224 ~~-----------~y~~~SGTSmAAP~VAG~aALlls~~P~ltp~qVr~~L~~tAt~~~i~~~~~p~~~~~~tpN~l~~~ 292 (546)
T 2qtw_B 224 ST-----------CFVSQSGTSQAAAHVAGIAAMMLSAEPELTLAELRQRLIHFSAKDVINEAWFPEDQRVLTPNLVAAL 292 (546)
T ss_dssp TT-----------CEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTSEESCSCGGGSCHHHHTTSCCEECCC
T ss_pred CC-----------cEeeeCcCcHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhccccccCCccCccccCCCCccchhcc
Confidence 32 79999999999999999999999999999999999999999986532211110 000011
Q ss_pred CCCCCCCCCCc--ccccccCC
Q 004278 590 ASTPYDFGAGH--VNLDRAMD 608 (764)
Q Consensus 590 ~~~~~~~G~G~--vn~~~Al~ 608 (764)
+...+.+|+|+ .++..+..
T Consensus 293 ~~~~~~~G~~l~~~~~w~a~s 313 (546)
T 2qtw_B 293 PPSTHGAGWQLFCRTVWSAHS 313 (546)
T ss_dssp CCTTCC--CCCEEEEEECCCC
T ss_pred CCcccccCCCcchhchhccCC
Confidence 22455677887 66666654
No 32
>2id4_A Kexin; KEX2, kexin, furin, proprotein, prohormone, convertase, SUBT like protease, serine protease; HET: NDG; 1.90A {Saccharomyces cerevisiae} SCOP: b.18.1.20 c.41.1.1 PDB: 1r64_A* 1ot5_A*
Probab=100.00 E-value=2.5e-45 Score=418.43 Aligned_cols=286 Identities=19% Similarity=0.207 Sum_probs=212.6
Q ss_pred CCCccCCCCCCCcEEEEEecCCCCCCCCccCCCCCCCCCcceeeeecccccCcccCCceeeeeeeccccccccCCCCCCC
Q 004278 123 QGLWSESDYGSDVIIGVFDTGIWPERRSFSDLNIGSIPSKWKGVCQVGVKFTAKNCNKKIIGARFFSKGHEAAGGSAGPI 202 (764)
Q Consensus 123 ~~~~~~~~~G~gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~g~~~~~~~~~~~ 202 (764)
..+|..+.+|+||+|||||||||++||+|.++-. ..+.++|..+ .
T Consensus 44 ~~aw~~g~tG~gv~VaViDtGvd~~Hpdl~~~~~-------------------------~~~~~d~~~~------~---- 88 (503)
T 2id4_A 44 LDLWYNNITGAGVVAAIVDDGLDYENEDLKDNFC-------------------------AEGSWDFNDN------T---- 88 (503)
T ss_dssp HHHHHTTCSCTTCEEEEEESCCCTTSTTTTTTBC-------------------------GGGCEETTTT------B----
T ss_pred HHHHhcCCCCCCeEEEEEeCCCCCCChhHhhccc-------------------------ccCcccCCCC------C----
Confidence 4589999999999999999999999999975310 0012223221 0
Q ss_pred CCCCCCccccCCCCCCCCChhhhHHHhcccCCCCCCccccccceeeeecCCCcEEEEEeecCCCCCCHHHHHHHHHHHHh
Q 004278 203 GGGINETVEFMSPRDADGHGTHTASTAAGRHAFRASMEGYAAGVAKGVAPKARLAVYKVCWKNAGCFDSDILAAFDAAVN 282 (764)
Q Consensus 203 ~~~~~~~~~~~~~~D~~gHGThVAgi~AG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g~~~s~i~~ai~~A~~ 282 (764)
.+.....|..||||||||||||...++.+ +.||||+|+|+.+|+++.. ++.+++++||+||++
T Consensus 89 -------~~~~p~~d~~gHGT~vAGiiaa~~~n~~~--------~~GvAp~a~i~~~rv~~~~--~~~~~~~~ai~~a~~ 151 (503)
T 2id4_A 89 -------NLPKPRLSDDYHGTRCAGEIAAKKGNNFC--------GVGVGYNAKISGIRILSGD--ITTEDEAASLIYGLD 151 (503)
T ss_dssp -------SCCCCCSTTTTHHHHHHHHHHCCSSSSSS--------CCCTTTTSEEEEEECTTSC--CCHHHHHHHTTTTTT
T ss_pred -------CCCCCCCCCCChHHHHHHHHHhccCCCCC--------cEEECCCCEEEEEEeeCCC--CChHHHHHHHHhHhh
Confidence 01112357889999999999998654433 3699999999999999753 678899999999999
Q ss_pred CCCcEEEeccCCCCCC-CCCCCCCHHHHHHHHhh-----cCCcEEEEecCCCCCCCC--ccc--cCCCceEEecCCccCC
Q 004278 283 DGVDVISISIGGGDGI-SSPYYLDPIAIGSYGAA-----SRGVFVSSSAGNDGPNGM--SVT--NLAPWIVTVGAGTIDR 352 (764)
Q Consensus 283 ~gvdVIn~SlG~~~g~-~~~~~~~~~~~a~~~a~-----~~Gi~vV~AAGN~G~~~~--~~~--~~~p~vitVgAst~d~ 352 (764)
++ +|||||||..... ........+..++.++. .+|++||+||||+|.... .++ ..++++|+|||.+.
T Consensus 152 ~~-~Iin~S~G~~~~~~~~~~~~~~~~~a~~~a~~~~r~~~GvlvV~AAGN~g~~~~~~~~~~~~~~~~vI~VgA~~~-- 228 (503)
T 2id4_A 152 VN-DIYSCSWGPADDGRHLQGPSDLVKKALVKGVTEGRDSKGAIYVFASGNGGTRGDNCNYDGYTNSIYSITIGAIDH-- 228 (503)
T ss_dssp TC-SEEEECEESCCSSSCCBCCCHHHHHHHHHHHHHHHHHTCCEEEEECCSCGGGTCCGGGBTTTTCTTEEEEEEECT--
T ss_pred cC-CEEEeCCCcCCCCccccCchHHHHHHHHHHHHhcccCCCcEEEEecCCCCCcCCCCCCCcccCCCCEEEEEeeCC--
Confidence 98 9999999986310 01111234566666665 479999999999997533 222 25678999998421
Q ss_pred ccceEEEeCCCeEEEeEEeecCCCCCCceeeEEecCCCCccccccccCCCCCCCccceeEEEEecCCCchhhHHHHHHHc
Q 004278 353 NFPAEVRLGDGRRLSGVSLYAGAPLSEKMYPLIYPGKSGVLSASLCMENSLDPNLVRGKIVICDRGSSPRVAKGLVVKKA 432 (764)
Q Consensus 353 ~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~plv~~~~~~~~~~~~C~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~ 432 (764)
T Consensus 229 -------------------------------------------------------------------------------- 228 (503)
T 2id4_A 229 -------------------------------------------------------------------------------- 228 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CceEEEEeccCCCCCcccHHHHHHHHHcCCCCeEEEEecceeecccCCCeeecccCCCCCCCCCCCCCCcEEc----CCC
Q 004278 433 GGVGMILANGISNGEGLVGDAVKAYISSTANPTATIDFKGTILGIKPAPVVASFSARGPNGLNPEILKPDLIA----PGV 508 (764)
Q Consensus 433 Ga~g~i~~n~~~~~~~~~~~~~~~y~~~~~~~~~~i~~~~t~~~~~~~~~~a~fSS~Gp~~~~~~~lKPDI~A----PG~ 508 (764)
.+.++.||++||.. |++| ||.
T Consensus 229 -----------------------------------------------~~~~a~~S~~g~~~--------~~~a~~~gpG~ 253 (503)
T 2id4_A 229 -----------------------------------------------KDLHPPYSEGCSAV--------MAVTYSSGSGE 253 (503)
T ss_dssp -----------------------------------------------TSCCCTTCCCCTTE--------EEEEECSBTTB
T ss_pred -----------------------------------------------CCCcCCcCCCCCcc--------eEeecCCCCCC
Confidence 12578999999984 7887 899
Q ss_pred cEEecccCCCCCCCCCCCCccceeEEeccccchhhhHHHHHHHHhhhCCCCCHHHHHHHHHhccccccCC-CCCCCccCC
Q 004278 509 NILAAWTEAVGPTGLDSDLRKTEFNILSGTSMACPHVSGAAALLKSAHPDWSPAAIRSAMMTTASIVDNS-NQPMTDEAT 587 (764)
Q Consensus 509 ~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAGvaALl~~~~P~~sp~~ik~~L~~TA~~~~~~-~~~~~~~~~ 587 (764)
.|+++...+ ..|..++|||||||||||++|||+|++|+|++++||++|++||+++... ...+....
T Consensus 254 ~I~st~~~~------------~~~~~~sGTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~~~~~~~~~~~~~~~- 320 (503)
T 2id4_A 254 YIHSSDING------------RCSNSHGGTSAAAPLAAGVYTLLLEANPNLTWRDVQYLSILSAVGLEKNADGDWRDSA- 320 (503)
T ss_dssp CEEEECSTT------------CEEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBCCTTCGGGCCEECS-
T ss_pred ceEeecCCC------------CceecCCCccccchhhhHHHHHHHHhCCCCCHHHHHHHHHhccccCCCCcCCCceecC-
Confidence 999995432 1799999999999999999999999999999999999999999987643 11111111
Q ss_pred CCCCCCCCCCCCcccccccCCCCc
Q 004278 588 GNASTPYDFGAGHVNLDRAMDPGL 611 (764)
Q Consensus 588 ~~~~~~~~~G~G~vn~~~Al~~gl 611 (764)
........||+|+||+.+|++...
T Consensus 321 ~g~~~~~~~G~G~vda~~Av~~a~ 344 (503)
T 2id4_A 321 MGKKYSHRYGFGKIDAHKLIEMSK 344 (503)
T ss_dssp SSSEEBTTTBTCBCCHHHHHHHHT
T ss_pred CCCccCcccCCcEecHHHHHHHHh
Confidence 112234589999999999998544
No 33
>3f7m_A Alkaline serine protease VER112; verticillium psalliotae, cuticle- degrading protease, nematodes, hydrolase, secreted, zymogen; 1.60A {Lecanicillium psalliotae} SCOP: c.41.1.1 PDB: 3f7o_A
Probab=100.00 E-value=5.2e-45 Score=385.78 Aligned_cols=229 Identities=32% Similarity=0.446 Sum_probs=194.4
Q ss_pred CccCCCCCCCcEEEEEecCCCCCCCCccCCCCCCCCCcceeeeecccccCcccCCceeeeeeeccccccccCCCCCCCCC
Q 004278 125 LWSESDYGSDVIIGVFDTGIWPERRSFSDLNIGSIPSKWKGVCQVGVKFTAKNCNKKIIGARFFSKGHEAAGGSAGPIGG 204 (764)
Q Consensus 125 ~~~~~~~G~gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~g~~~~~~~~~~~~~ 204 (764)
+|+.. +|+||+|+|||||||++||+|.+. +...+.|..
T Consensus 25 ~~~~~-~G~gv~VaViDtGvd~~h~~l~~~---------------------------~~~~~~~~~-------------- 62 (279)
T 3f7m_A 25 AYDTS-AGAGACVYVIDTGVEDTHPDFEGR---------------------------AKQIKSYAS-------------- 62 (279)
T ss_dssp EECTT-TTTTEEEEEEESCCCTTCGGGTTC---------------------------EEEEEECSS--------------
T ss_pred eecCC-CCCCCEEEEEcCCCCCCChhhccc---------------------------cccccCCCC--------------
Confidence 46655 899999999999999999999742 222333322
Q ss_pred CCCCccccCCCCCCCCChhhhHHHhcccCCCCCCccccccceeeeecCCCcEEEEEeecCCCCCCHHHHHHHHHHHHhCC
Q 004278 205 GINETVEFMSPRDADGHGTHTASTAAGRHAFRASMEGYAAGVAKGVAPKARLAVYKVCWKNAGCFDSDILAAFDAAVNDG 284 (764)
Q Consensus 205 ~~~~~~~~~~~~D~~gHGThVAgi~AG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g~~~s~i~~ai~~A~~~g 284 (764)
...|..||||||||||+|+. .||||+|+|+.+|+++....+..++++++|+|+++++
T Consensus 63 ---------~~~d~~gHGT~vAgii~~~~--------------~GvAp~a~l~~~~v~~~~~~~~~~~~~~ai~~~~~~~ 119 (279)
T 3f7m_A 63 ---------TARDGHGHGTHCAGTIGSKT--------------WGVAKKVSIFGVKVLDDSGSGSLSNIIAGMDFVASDR 119 (279)
T ss_dssp ---------SSSCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHHG
T ss_pred ---------CCCCCCCcHHHHHHHHhcCc--------------cccCCCCEEEEEEeeCCCCCcCHHHHHHHHHHHHhcc
Confidence 12278899999999999862 5999999999999998873478899999999999986
Q ss_pred -------CcEEEeccCCCCCCCCCCCCCHHHHHHHHhhcCCcEEEEecCCCCCCCCc-cccCCCceEEecCCccCCccce
Q 004278 285 -------VDVISISIGGGDGISSPYYLDPIAIGSYGAASRGVFVSSSAGNDGPNGMS-VTNLAPWIVTVGAGTIDRNFPA 356 (764)
Q Consensus 285 -------vdVIn~SlG~~~g~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~-~~~~~p~vitVgAst~d~~~~~ 356 (764)
++|||||||.. ..+.+..++.++.++|++||+||||+|..... .+...|++|+|||.+.
T Consensus 120 ~~~~~~~~~Vin~S~g~~-------~~~~~~~a~~~a~~~gv~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~------ 186 (279)
T 3f7m_A 120 QSRNCPRRTVASMSLGGG-------YSAALNQAAARLQSSGVFVAVAAGNDNRDAANTSPASEPTVCTVGATDS------ 186 (279)
T ss_dssp GGSCCTTEEEEEECCCEE-------CCHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECT------
T ss_pred ccccCCCCeEEEeCCCcC-------ccHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCcCCCCCCCEEEEeecCC------
Confidence 89999999976 35678888889999999999999999976543 4778899999998421
Q ss_pred EEEeCCCeEEEeEEeecCCCCCCceeeEEecCCCCccccccccCCCCCCCccceeEEEEecCCCchhhHHHHHHHcCceE
Q 004278 357 EVRLGDGRRLSGVSLYAGAPLSEKMYPLIYPGKSGVLSASLCMENSLDPNLVRGKIVICDRGSSPRVAKGLVVKKAGGVG 436 (764)
Q Consensus 357 ~~~~~~g~~~~g~~~~~~~~~~~~~~plv~~~~~~~~~~~~C~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g 436 (764)
T Consensus 187 -------------------------------------------------------------------------------- 186 (279)
T 3f7m_A 187 -------------------------------------------------------------------------------- 186 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEeccCCCCCcccHHHHHHHHHcCCCCeEEEEecceeecccCCCeeecccCCCCCCCCCCCCCCcEEcCCCcEEecccC
Q 004278 437 MILANGISNGEGLVGDAVKAYISSTANPTATIDFKGTILGIKPAPVVASFSARGPNGLNPEILKPDLIAPGVNILAAWTE 516 (764)
Q Consensus 437 ~i~~n~~~~~~~~~~~~~~~y~~~~~~~~~~i~~~~t~~~~~~~~~~a~fSS~Gp~~~~~~~lKPDI~APG~~I~sa~~~ 516 (764)
.+.++.||++||. |||+|||++|+++++.
T Consensus 187 -------------------------------------------~~~~~~~S~~g~~--------~di~ApG~~i~s~~~~ 215 (279)
T 3f7m_A 187 -------------------------------------------NDVRSTFSNYGRV--------VDIFAPGTSITSTWIG 215 (279)
T ss_dssp -------------------------------------------TSBBCTTCCBSTT--------CCEEEECSSEEEECGG
T ss_pred -------------------------------------------CCCCCCCCCCCCC--------CeEEECCCCeEeecCC
Confidence 1367899999995 5999999999999876
Q ss_pred CCCCCCCCCCCccceeEEeccccchhhhHHHHHHHHhhhCCCCCHHHHHHHHHhcccccc
Q 004278 517 AVGPTGLDSDLRKTEFNILSGTSMACPHVSGAAALLKSAHPDWSPAAIRSAMMTTASIVD 576 (764)
Q Consensus 517 ~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAGvaALl~~~~P~~sp~~ik~~L~~TA~~~~ 576 (764)
+ .|..++|||||||||||++|||+|++|+ ++++||++|++||++..
T Consensus 216 ~-------------~~~~~sGTS~AaP~vaG~aAll~~~~p~-t~~~v~~~L~~tA~~~~ 261 (279)
T 3f7m_A 216 G-------------RTNTISGTSMATPHIAGLAAYLFGLEGG-SAGAMCGRIQTLSTKNV 261 (279)
T ss_dssp G-------------CEEEECSHHHHHHHHHHHHHHHHHHTCC-CTTTHHHHHHHHSEESC
T ss_pred C-------------CEEEeeEHHHHHHHHHHHHHHHHHhCCC-CHHHHHHHHHHhccccc
Confidence 5 7899999999999999999999999999 99999999999999753
No 34
>3hjr_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria}
Probab=100.00 E-value=1.1e-42 Score=406.91 Aligned_cols=319 Identities=23% Similarity=0.226 Sum_probs=199.4
Q ss_pred CCCccCCCCCCCcEEEEEecCCCCCCCCccCCCCCCCCCcceeeeecccccCcccCCceeeeeeeccccccccCCCCCCC
Q 004278 123 QGLWSESDYGSDVIIGVFDTGIWPERRSFSDLNIGSIPSKWKGVCQVGVKFTAKNCNKKIIGARFFSKGHEAAGGSAGPI 202 (764)
Q Consensus 123 ~~~~~~~~~G~gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~g~~~~~~~~~~~ 202 (764)
..+|..+++|+||+|||||||||++||||.++- ..+.++|..+.
T Consensus 60 ~~aw~~g~tG~GV~VaViDtGid~~HpDL~~n~--------------------------~~~~~~~~~~~---------- 103 (600)
T 3hjr_A 60 WWAHRTGVLGQGVNVAVVDDGLAIAHPDLADNV--------------------------RPGSKNVVTGS---------- 103 (600)
T ss_dssp HHHHHHTCSCTTCEEEEESSCCCTTCTTTGGGB--------------------------CSCCBCTTTSS----------
T ss_pred HHHHHcCCCCCCeEEEEEcCCCCCCChhHhhcc--------------------------ccCcceeecCC----------
Confidence 358999999999999999999999999997430 11222232211
Q ss_pred CCCCCCccccCCCCCCCCChhhhHHHhcccCCCCCCccccccceeeeecCCCcEEEEEeecCCCCCCHHHHHHHH-HHHH
Q 004278 203 GGGINETVEFMSPRDADGHGTHTASTAAGRHAFRASMEGYAAGVAKGVAPKARLAVYKVCWKNAGCFDSDILAAF-DAAV 281 (764)
Q Consensus 203 ~~~~~~~~~~~~~~D~~gHGThVAgi~AG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~g~~~s~i~~ai-~~A~ 281 (764)
.+.....|.+||||||||||||.. ++.+ +.||||+|+|+.+|++++...+..++++.|+ +++.
T Consensus 104 -------~dp~p~~~~~gHGThVAGiIAa~~-n~~g--------~~GVAp~A~l~~~rvl~~~~~~~~~~~~~a~~~~~~ 167 (600)
T 3hjr_A 104 -------DDPTPTDPDTAHGTSVSGIIAAVD-NAIG--------TKGIAPRAQLQGFNLLDDNSQQLQKDWLYALGDSNA 167 (600)
T ss_dssp -------SCCCCCSTTCCHHHHHHHHHHCCS-SSSS--------CCCSSTTCEEEEECTTSTTCCCCHHHHHHHTTSSHH
T ss_pred -------CCCCCCCCCCChHHHHHHHHhEeC-CCCC--------cEEeCCCCEEEEEEeecCCCCccHHHHHHHhhhhhh
Confidence 111223457899999999999863 2221 3699999999999999887446778887666 6778
Q ss_pred hCCCcEEEeccCCCCCCCCCCCCCHHH-----HHHH--HhhcCCcEEEEecCCCCCCCCccccCCCceEEecCCccCCcc
Q 004278 282 NDGVDVISISIGGGDGISSPYYLDPIA-----IGSY--GAASRGVFVSSSAGNDGPNGMSVTNLAPWIVTVGAGTIDRNF 354 (764)
Q Consensus 282 ~~gvdVIn~SlG~~~g~~~~~~~~~~~-----~a~~--~a~~~Gi~vV~AAGN~G~~~~~~~~~~p~vitVgAst~d~~~ 354 (764)
.++++|||+|||... ..+...+... .++. ....+|+++|+||||.+....... .. +.+
T Consensus 168 ~~~~~I~n~S~G~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~AaGNg~~~~~~~~-----~~-~~~------- 232 (600)
T 3hjr_A 168 SRDNRVFNQSYGMSV--VDPRSANSLDQSQLDRLFEQQTLKAQGAAYIKAAGNGFNKIAAGG-----YV-LNR------- 232 (600)
T ss_dssp HHTCSEEEECCCCCC--SSCCCSCSHHHHHHHHHHHHHHHSTTCCEEEEECCSCSSEEEETT-----EE-EEE-------
T ss_pred hcCCCEEecccCccc--cCCccCCcchhhhHHHHHHHhhhccCCcEEEEeccCccccccccc-----cc-ccc-------
Confidence 889999999999763 1222222221 1111 124689999999999764311000 00 000
Q ss_pred ceEEEeCCCeEEEeEEeecCCCCCCceeeEEecCCCCccccccccCCCCCCCccceeEEEEecCCCchhhHHHHHHHcCc
Q 004278 355 PAEVRLGDGRRLSGVSLYAGAPLSEKMYPLIYPGKSGVLSASLCMENSLDPNLVRGKIVICDRGSSPRVAKGLVVKKAGG 434 (764)
Q Consensus 355 ~~~~~~~~g~~~~g~~~~~~~~~~~~~~plv~~~~~~~~~~~~C~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga 434 (764)
.++........|... .+......|.|..
T Consensus 233 --------------------------------~g~~~~~~~~~~~~d--~~~~~~~~IsVgA------------------ 260 (600)
T 3hjr_A 233 --------------------------------TGNGPKLPFENSNLD--PSNSNFWNLVVSA------------------ 260 (600)
T ss_dssp --------------------------------ESSCCCCCSSBTTSS--GGGGSSSEEEEEE------------------
T ss_pred --------------------------------CCCCCCCCccccccc--CccccCcceEEee------------------
Confidence 000000000001100 0000111111110
Q ss_pred eEEEEeccCCCCCcccHHHHHHHHHcCCCCeEEEEecceeecccCCCeeecccCCCCCCCCCCCCCCcEEcCCCcE----
Q 004278 435 VGMILANGISNGEGLVGDAVKAYISSTANPTATIDFKGTILGIKPAPVVASFSARGPNGLNPEILKPDLIAPGVNI---- 510 (764)
Q Consensus 435 ~g~i~~n~~~~~~~~~~~~~~~y~~~~~~~~~~i~~~~t~~~~~~~~~~a~fSS~Gp~~~~~~~lKPDI~APG~~I---- 510 (764)
....+.++.||++|+.. +++|||..+
T Consensus 261 ------------------------------------------~~~~g~~a~yS~~G~~v--------~~~apg~~~~~~~ 290 (600)
T 3hjr_A 261 ------------------------------------------LNADGVRSSYSSVGSNI--------FLSATGGEYGTDT 290 (600)
T ss_dssp ------------------------------------------ECTTSSBCTTCCBCTTC--------CEEEECCSCSSSS
T ss_pred ------------------------------------------ecCCCCEeecccCCcce--------eeccCCCCCCCCC
Confidence 12335788999999874 889998763
Q ss_pred ---E-ecccCCCCC-------------CCCCCCCccceeEEeccccchhhhHHHHHHHHhhhCCCCCHHHHHHHHHhccc
Q 004278 511 ---L-AAWTEAVGP-------------TGLDSDLRKTEFNILSGTSMACPHVSGAAALLKSAHPDWSPAAIRSAMMTTAS 573 (764)
Q Consensus 511 ---~-sa~~~~~~~-------------~~~~~~~~~~~y~~~sGTSmAaP~VAGvaALl~~~~P~~sp~~ik~~L~~TA~ 573 (764)
. ...++.... ...........|..++|||||||||||++|||+|+||+||++|||++|++||+
T Consensus 291 ~~~vt~~~pG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sGTSmAaP~VAGvaALll~a~P~lt~~~v~~~L~~TA~ 370 (600)
T 3hjr_A 291 PAMVTTDLPGCDMGYNRTDDPSTNRLHGNSQLDASCDYNGVMNGTSSATPSTSGAMALLMSAYPDLSVRDLRDLLARSAT 370 (600)
T ss_dssp CCEEEECCSSTTSSSSSTTSCCSSTTTTCTTTCTTCCEEEEECSHHHHHHHHHHHHHHHHHHSTTSCHHHHHHHHHHHCB
T ss_pred cceeeecCCCccccccccCCccccccccccccCCCCCceeccccccccchhHHHHHHHHHHHCCCCCHHHHHHHHHhhCc
Confidence 2 222211000 00011123347899999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCc--------------------cCCCCCCCCCCCCCCcccccccCCCCc
Q 004278 574 IVDNSNQPMTD--------------------EATGNASTPYDFGAGHVNLDRAMDPGL 611 (764)
Q Consensus 574 ~~~~~~~~~~~--------------------~~~~~~~~~~~~G~G~vn~~~Al~~gl 611 (764)
+++....|+.. +..+. .....||+|+||+.+|++...
T Consensus 371 ~~d~~~~p~~~~~~~~~~~~~~~~~~~~w~~N~aG~-~~s~~yGfG~vDA~~aV~~A~ 427 (600)
T 3hjr_A 371 RVDAKHQPVMVSYTSSTGKVRDVKGLEGWERNAAGM-WFSPTYGFGLIDVNKALELAA 427 (600)
T ss_dssp CCSTTCCCEEEEEECTTSCEEEEEEECCSEECTTSC-EEBTTTBTCBCCHHHHHHHHT
T ss_pred cCCCCCCcccccccccccccccccccCCcccccCCc-eEccccCCceecHHHHHHHhh
Confidence 99876654221 11111 123479999999999987443
No 35
>1t1e_A Kumamolisin; proenzyme, prosubtilase, activation mechanism, sedolisin, serine-carboxyl proteinase, hydrolase; 1.18A {Bacillus SP} SCOP: c.41.1.2 d.58.3.2 PDB: 1t1g_A 1t1i_A 1gt9_1 1gtg_1 1gtj_1* 1gtl_1* 1sio_A* 1sn7_A 1zvj_A 1siu_A 1zvk_A
Probab=99.92 E-value=8.2e-26 Score=258.30 Aligned_cols=96 Identities=28% Similarity=0.473 Sum_probs=77.4
Q ss_pred eeeecCCCcEEEEEeecCCCCCCHHHHHHHHHHHHh---CCCcEEEeccCCCCCCCCCC---CCCHHHHHHHHhhcCCcE
Q 004278 247 AKGVAPKARLAVYKVCWKNAGCFDSDILAAFDAAVN---DGVDVISISIGGGDGISSPY---YLDPIAIGSYGAASRGVF 320 (764)
Q Consensus 247 ~~GvAP~A~l~~~kv~~~~~g~~~s~i~~ai~~A~~---~gvdVIn~SlG~~~g~~~~~---~~~~~~~a~~~a~~~Gi~ 320 (764)
+.||||+|+|+.|++. ...++++++|+||++ ++++|||||||... ..+ +...+..++.+|..+||+
T Consensus 274 ~~gvAp~a~i~~~~~~-----~~~~~~~~ai~~av~~~~~~~~VIS~S~G~~e---~~~~~~~~~~~~~~~~~a~~~Gi~ 345 (552)
T 1t1e_A 274 AGALAPGAKIAVYFAP-----NTDAGFLNAITTAVHDPTHKPSIVSISWGGPE---DSWAPASIAAMNRAFLDAAALGVT 345 (552)
T ss_dssp HHHHCTTSEEEEEECC-----SSHHHHHHHHHHHHTCTTTCCSEEEECEEEEG---GGSCHHHHHHHHHHHHHHHHTTCE
T ss_pred hhccCCCCeEEEEEcC-----CCCchHHHHHHHHHhcccCCCCEEEecccCCc---ccCCHHHHHHHHHHHHHHHhCCeE
Confidence 5799999999999973 256789999999998 79999999999872 211 123566667778899999
Q ss_pred EEEecCCCCCCC--------CccccCCCceEEecCCcc
Q 004278 321 VSSSAGNDGPNG--------MSVTNLAPWIVTVGAGTI 350 (764)
Q Consensus 321 vV~AAGN~G~~~--------~~~~~~~p~vitVgAst~ 350 (764)
||+||||+|... ..+++.+|||++|||++.
T Consensus 346 vv~AsGd~G~~~~~~~~~~~~~~PAs~P~V~aVGat~~ 383 (552)
T 1t1e_A 346 VLAAAGDSGSTDGEQDGLYHVDFPAASPYVLACGGTRL 383 (552)
T ss_dssp EEEECCSBGGGTTCCSSSCCCEETTTSTTSEEEEEEEE
T ss_pred EEEecCCCCCCCCCCCCcccccCcccCCCEEEEecccc
Confidence 999999999643 356688999999999764
No 36
>1ga6_A Serine-carboxyl proteinase; serine-carboxyl proteinase, hydrolase-hydrolase inhibitor CO; 1.00A {Pseudomonas SP} SCOP: c.41.1.2 PDB: 1ga4_A* 1ga1_A 1kdv_A* 1kdy_A* 1kdz_A* 1ke1_A* 1ke2_A* 1nlu_A*
Probab=99.86 E-value=3.7e-22 Score=217.54 Aligned_cols=102 Identities=21% Similarity=0.231 Sum_probs=80.6
Q ss_pred eecCCCcEEEEEeecCCCCCCHHHHHHHHHHHHh-CCCcEEEeccCCCCCC-CCCCCCCHHHHHHHHhhcCCcEEEEecC
Q 004278 249 GVAPKARLAVYKVCWKNAGCFDSDILAAFDAAVN-DGVDVISISIGGGDGI-SSPYYLDPIAIGSYGAASRGVFVSSSAG 326 (764)
Q Consensus 249 GvAP~A~l~~~kv~~~~~g~~~s~i~~ai~~A~~-~gvdVIn~SlG~~~g~-~~~~~~~~~~~a~~~a~~~Gi~vV~AAG 326 (764)
.+||+++++.|++.+.. +++.++++++|+||++ ++++|||||||..... ....+.+.+..++.+|..+||+||+|+|
T Consensus 91 ~~aP~a~~~~~~~~~~~-~~~~~~~~~ai~~av~~~~~~ViS~S~G~~e~~~~~~~~~~~~~~~~~~a~~~Gitvv~AsG 169 (372)
T 1ga6_A 91 SAGGAVQQLLFYMADQS-ASGNTGLTQAFNQAVSDNVAKVINVSLGWCEADANADGTLQAEDRIFATAAAQGQTFSVSSG 169 (372)
T ss_dssp HTTSCEEEEEEEEECTT-SSTTHHHHHHHHHHHHHCCCSEEEECCCEEHHHHHHTTHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred hcCCCCcEEEEEeCCCC-CcccHHHHHHHHHHHhcCCCCEEEeCCCCCCCCCchHHHHHHHHHHHHHHHhCCcEEEEEEC
Confidence 57899999999998765 5778899999999998 8999999999986200 0011234566777788899999999999
Q ss_pred CCCCCCC-------------ccccCCCceEEecCCccC
Q 004278 327 NDGPNGM-------------SVTNLAPWIVTVGAGTID 351 (764)
Q Consensus 327 N~G~~~~-------------~~~~~~p~vitVgAst~d 351 (764)
|+|...+ .+++.+|||++||+++..
T Consensus 170 d~G~~~~~~~g~~~~~~~~~~~PAs~P~V~aVGat~~~ 207 (372)
T 1ga6_A 170 DEGVYECNNRGYPDGSTYSVSWPASSPNVIAVGGTTLY 207 (372)
T ss_dssp SBTTBTTTTTTCCCTTCCBCEETTTCTTSEEEEEEEEE
T ss_pred CCCCccccccCccCCccCCcCCCCCCCCeEEEEeeecc
Confidence 9997542 456789999999997653
No 37
>3edy_A Tripeptidyl-peptidase 1; protease, TPP1, sedolisin, batten disease, lincl, zymogen, P exopeptidase, endopeptidase, S53 family, CLN2; HET: NAG; 1.85A {Homo sapiens} PDB: 3ee6_A*
Probab=99.06 E-value=1.7e-10 Score=130.93 Aligned_cols=100 Identities=18% Similarity=0.216 Sum_probs=62.4
Q ss_pred eecCCCcEEEEEeecCCCCCCHHHHHHHHHHHH--hCCCcEEEeccCCCCCCCCCCCCCHHHHHHHHhhcCCcEEEEecC
Q 004278 249 GVAPKARLAVYKVCWKNAGCFDSDILAAFDAAV--NDGVDVISISIGGGDGISSPYYLDPIAIGSYGAASRGVFVSSSAG 326 (764)
Q Consensus 249 GvAP~A~l~~~kv~~~~~g~~~s~i~~ai~~A~--~~gvdVIn~SlG~~~g~~~~~~~~~~~~a~~~a~~~Gi~vV~AAG 326 (764)
++++...++.|-.... ......++..+++.. .+-++|||+|||.........+...+...+..+..+||.|++|+|
T Consensus 263 a~~~~i~~~~~~~~g~--~~~~e~~l~~l~~l~~~~~~~~ViS~S~G~~e~~~~~~y~~~~~~~~~~~~~~Gitv~~ASG 340 (544)
T 3edy_A 263 SAGANISTWVYSSPGR--HEGQEPFLQWLMLLSNESALPHVHTVSYGDDEDSLSSAYIQRVNTELMKAAARGLTLLFASG 340 (544)
T ss_dssp HHSTTSEEEEECCCSC--CTTCCHHHHHHHHHTTCSSCCSEEEEECCEEGGGSCHHHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred ccCCCceEEEEecCCc--ccccccHHHHHHHHhccCCCCcEEEecCCCcccccCHHHHHHHHHHHHHHHhCCeEEEEecC
Confidence 4455555555543211 112234454444433 346889999999973101111223455566678899999999999
Q ss_pred CCCCCC----------CccccCCCceEEecCCcc
Q 004278 327 NDGPNG----------MSVTNLAPWIVTVGAGTI 350 (764)
Q Consensus 327 N~G~~~----------~~~~~~~p~vitVgAst~ 350 (764)
|+|... ..+++.+|||++||+++.
T Consensus 341 D~G~~~~~~~~~~~~~~~~Pas~P~VtaVGgT~l 374 (544)
T 3edy_A 341 DSGAGCWSVSGRHQFRPTFPASSPYVTTVGGTSF 374 (544)
T ss_dssp SSTTBCEEETTEEECCCEETTTCTTSEEEEEEEE
T ss_pred CCCccccCCCCCccccCCCcCCCCcEEEEeeeec
Confidence 999642 246688999999999765
No 38
>2w2n_P Proprotein convertase subtilisin/kexin type 9; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2m_P 2w2o_P 2w2p_P 2w2q_P 2xtj_P
Probab=99.02 E-value=9.1e-11 Score=105.43 Aligned_cols=77 Identities=18% Similarity=0.182 Sum_probs=66.7
Q ss_pred CCCCceEEEEeCCCCCCCCCcchHHHHHhhhcC--C-ceeEEEecceeeEEEEEcCHHHHHHHhCCCCeEEEEecccccc
Q 004278 32 DQTVKTFIFRIDSQSKPSIFPTHYHWYSSEFAS--P-VQILHTYDTVFHGFSATLSPDQAASLSRHPSVLAVIEDQRRQL 108 (764)
Q Consensus 32 ~~~~~~yIV~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~y~~~~ng~s~~~~~~~~~~L~~~p~V~~V~~~~~~~~ 108 (764)
...+++|||+|++...+.....|++|+.+++.+ . .++.|+|++.|+||+++++++++++|+++|+|.+||+|+.++.
T Consensus 34 ~~ip~~YIV~lk~~~~~~~~~~h~~~l~s~~~~~~~~~~i~~sY~~~~~GFaa~Lt~~~~~~L~~~P~V~~VE~D~~v~~ 113 (114)
T 2w2n_P 34 WRLPGTYVVVLKEETHLSQSERTARRLQAQAARRGYLTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIEEDSSVFA 113 (114)
T ss_dssp GEEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTCCCEEEEEECSSSSEEEEECCGGGHHHHHTSTTEEEEEEEEEEEE
T ss_pred cCCCCcEEEEECCCCCHHHHHHHHHHHHHHhhhcccCCceEEEecccceEEEEEcCHHHHHHHHcCCCccEEEeCceEec
Confidence 345889999999887655566788999987654 2 6899999999999999999999999999999999999998764
No 39
>3cnq_P Subtilisin BPN'; uncleaved, proenzyme, substrate complex, hydrolase, metal- binding, protease, secreted, serine protease, sporulation; 1.71A {Bacillus amyloliquefaciens} PDB: 3bgo_P 3co0_P 1spb_P 1scj_B
Probab=98.93 E-value=1.4e-09 Score=91.38 Aligned_cols=74 Identities=19% Similarity=0.209 Sum_probs=57.6
Q ss_pred CCCCceEEEEeCCCCCCCCCcchHHHHHhhhcCC-ceeEEEecceeeEEEEEcCHHHHHHHhCCCCeEEEEeccccccCc
Q 004278 32 DQTVKTFIFRIDSQSKPSIFPTHYHWYSSEFASP-VQILHTYDTVFHGFSATLSPDQAASLSRHPSVLAVIEDQRRQLHT 110 (764)
Q Consensus 32 ~~~~~~yIV~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~y~~~~ng~s~~~~~~~~~~L~~~p~V~~V~~~~~~~~~~ 110 (764)
...+++|||.|+++...... + +++++.. .++.++|++ |+||+++++++++++|+++|+|.+||+|+.+++++
T Consensus 5 ~~i~~~YIV~~k~~~~~~~~--~----~~~~~~~g~~i~~~y~~-~~Gfaa~l~~~~~~~L~~~p~V~~Ve~D~~v~~~t 77 (80)
T 3cnq_P 5 SNGEKKYIVGFKQGFKSCAK--K----EDVISEKGGKLQKCFKY-VDAASATLNEKAVEELKKDPSVAYVEEDKLYRALS 77 (80)
T ss_dssp ---CCEEEEEECTTCCSHHH--H----HHHHHTTTCEEEEECSS-SSEEEEECCHHHHHHHHTCTTEEEEEECCEEEECC
T ss_pred ccCCCCEEEEECCCCChHHH--H----HHHHHHcCCcceEEEcc-cEEEEEEcCHHHHHHHHhCCCccEEEeCcEEEEee
Confidence 34579999999987654211 1 1222222 789999998 99999999999999999999999999999999877
Q ss_pred CC
Q 004278 111 TR 112 (764)
Q Consensus 111 ~~ 112 (764)
+.
T Consensus 78 t~ 79 (80)
T 3cnq_P 78 AT 79 (80)
T ss_dssp C-
T ss_pred ec
Confidence 64
No 40
>2qtw_A Proprotein convertase subtilisin/kexin type 9 Pro; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_A 2pmw_A 3h42_A 3bps_P 3gcw_P 3gcx_P 3p5b_P 3p5c_P
Probab=98.76 E-value=3.5e-09 Score=96.19 Aligned_cols=76 Identities=18% Similarity=0.207 Sum_probs=62.1
Q ss_pred CCCceEEEEeCCCCCCCCCcchHHHHHhhhcC--C-ceeEEEecceeeEEEEEcCHHHHHHHhCCCCeEEEEecccccc
Q 004278 33 QTVKTFIFRIDSQSKPSIFPTHYHWYSSEFAS--P-VQILHTYDTVFHGFSATLSPDQAASLSRHPSVLAVIEDQRRQL 108 (764)
Q Consensus 33 ~~~~~yIV~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~y~~~~ng~s~~~~~~~~~~L~~~p~V~~V~~~~~~~~ 108 (764)
..+++|||.||++..+.....|.+++.+.+++ . .++.|+|++.|+||+++++++++++|+++|+|.+|++|+.++.
T Consensus 45 ~Ip~~YIV~~K~~~~~~~~~~~~~~l~~~~~~r~~g~~i~~~Y~~~~~GFaa~l~~~~~~~L~~~p~V~~VE~D~~v~a 123 (124)
T 2qtw_A 45 RLPGTYVVVLKEETHLSQSERTARRLQAQAARRGYLTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIEEDSSVFA 123 (124)
T ss_dssp EEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTCCCEEEEEECSSSCEEEEECCGGGHHHHHTSTTEEEEEEEEEEEE
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHHHHHHHhhcccCCceEEEecccceEEEEEcCHHHHHHHHcCCCCcEEEeCceEec
Confidence 45899999999987655445555565554322 2 6899999999999999999999999999999999999998764
No 41
>1v5i_B POIA1, IA-1=serine proteinase inhibitor; protease-inhibitor complex, subtilisin, hydrolase-Pro binding complex; 1.50A {Pleurotus ostreatus} SCOP: d.58.3.2 PDB: 1itp_A
Probab=98.58 E-value=4.6e-08 Score=81.02 Aligned_cols=70 Identities=16% Similarity=0.195 Sum_probs=58.2
Q ss_pred ceEEEEeCCCCCCCCCcchHHHHHhhhcCCceeEEEec-ceeeEEEEEcCHHHHHHHhCC--CCeEEEEecccccc
Q 004278 36 KTFIFRIDSQSKPSIFPTHYHWYSSEFASPVQILHTYD-TVFHGFSATLSPDQAASLSRH--PSVLAVIEDQRRQL 108 (764)
Q Consensus 36 ~~yIV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~-~~~ng~s~~~~~~~~~~L~~~--p~V~~V~~~~~~~~ 108 (764)
+.|||.||++........|.+++...- .++.+.|+ ..|+||+++++++++++|+++ |.|.+||+|+.+++
T Consensus 3 ~sYIV~lk~~~~~~~~~~~~~~~~~~g---g~i~~~y~~~~~~Gfa~~~~~~~l~~l~~~~~p~V~~VE~D~~v~~ 75 (76)
T 1v5i_B 3 GKFIVIFKNDVSEDKIRETKDEVIAEG---GTITNEYNMPGMKGFAGELTPQSLTKFQGLQGDLIDSIEEDHVAHA 75 (76)
T ss_dssp EEEEEEECTTCCHHHHHHHHHHHHHHT---CCCCEEEEETTEEEEEEEECHHHHHHHHHTBTTTEEEEEECCEEEC
T ss_pred ceEEEEECCCCCHHHHHHHHHHHHhhC---CceEEEEEcCceeEEEEEcCHHHHHHHHhcCCCCCcEEcCCcEEeC
Confidence 689999999876555555666665432 57899994 799999999999999999999 89999999998764
No 42
>3icu_A E3 ubiquitin-protein ligase RNF128; E3 ligase, energy, PA domain, transmembrane,protein turnover conjugation pathway; HET: NAG; 2.10A {Homo sapiens}
Probab=97.65 E-value=0.00013 Score=71.09 Aligned_cols=78 Identities=14% Similarity=0.148 Sum_probs=57.7
Q ss_pred ccccccCCCCCCC-------ccceeEEEEecCC-CchhhHHHHHHHcCceEEEEeccCCCCC---ccc------------
Q 004278 394 SASLCMENSLDPN-------LVRGKIVICDRGS-SPRVAKGLVVKKAGGVGMILANGISNGE---GLV------------ 450 (764)
Q Consensus 394 ~~~~C~~~~~~~~-------~~~gkivl~~~g~-~~~~~~~~~~~~~Ga~g~i~~n~~~~~~---~~~------------ 450 (764)
....|.+...... ..+|||+|++||. |.|.+|..+++++||.++|++|+...+. .+.
T Consensus 82 ~~~GC~~~~~~~~~~~~~~~~~~gkIaLV~RG~~CsF~~Kv~nAq~aGA~avIIyNn~~~g~~~~~m~~~~~~~IPsv~I 161 (194)
T 3icu_A 82 ALNACNPHTNFTVPTVWGSTVQVSWLALIQRGGGCTFADKIHLAYERGASGAVIFNFPGTRNEVIPMSHPGAVDIVAIMI 161 (194)
T ss_dssp CTTCCSTTCCBCCCBCTTSSCBCCEEEEEESCTTCCHHHHHHHHHHTTCSEEEEECCTTCTTCCCCCCCTTCCSSEEEEE
T ss_pred CcCCCCCCccccCCcccccccCCCeEEEEECCCCcCHHHHHHHHHHCCCcEEEEEeCCCCCCceeeecCCCCCceeEEEE
Confidence 4578987654222 2579999999999 9999999999999999999999852211 000
Q ss_pred ----HHHHHHHHHcCCCCeEEEEec
Q 004278 451 ----GDAVKAYISSTANPTATIDFK 471 (764)
Q Consensus 451 ----~~~~~~y~~~~~~~~~~i~~~ 471 (764)
...|++++.++...+++|...
T Consensus 162 s~~~G~~L~~~L~~G~~Vtvti~vg 186 (194)
T 3icu_A 162 GNLKGTKILQSIQRGIQVTMVIEVG 186 (194)
T ss_dssp CHHHHHHHHHHHHTTCCEEEEEEEE
T ss_pred CHHHHHHHHHHHHCCCeEEEEEECC
Confidence 018889998887777766654
No 43
>2z30_B TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 2z2y_B 3a3p_B 2z56_B 2z58_B 2z57_B 3a3n_B 3a3o_B
Probab=97.59 E-value=8e-05 Score=59.34 Aligned_cols=61 Identities=15% Similarity=0.192 Sum_probs=49.2
Q ss_pred ceEEEEeCCCCCCCCCcchHHHHHhhhcCC-ceeEEEecceeeEEEEEcCHHHHHHHhCCCCeEEEEeccccc
Q 004278 36 KTFIFRIDSQSKPSIFPTHYHWYSSEFASP-VQILHTYDTVFHGFSATLSPDQAASLSRHPSVLAVIEDQRRQ 107 (764)
Q Consensus 36 ~~yIV~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~y~~~~ng~s~~~~~~~~~~L~~~p~V~~V~~~~~~~ 107 (764)
.+|||.|+++.. ....++.. +++.++|. .+++++++++++.++.|+++|+|++|++|...+
T Consensus 2 ~~~IV~f~~~~~----------~~~~i~~~gG~i~~~~~-~I~a~~~~lp~~~~~~L~~~p~V~yVE~D~~v~ 63 (65)
T 2z30_B 2 IRVIVSVDKAKF----------NPHEVLGIGGHIVYQFK-LIPAVVVDVPANAVGKLKKMPGVEKVEFDHQAV 63 (65)
T ss_dssp EEEEEEECGGGC----------CGGGGGGGTCEEEEECS-SSSEEEEEECGGGHHHHHTSTTEEEEEECCEEE
T ss_pred eeEEEEEcCcch----------hHHHHHHCCCEEEEEec-CCcEEEEEeCHHHHHHHhcCCCceEEecCcEEE
Confidence 489999987521 11123333 89999997 799999999999999999999999999998764
No 44
>2ys4_A Hydrocephalus-inducing protein homolog; hydin, PAPD-like, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.59 E-value=0.036 Score=49.76 Aligned_cols=63 Identities=24% Similarity=0.367 Sum_probs=50.1
Q ss_pred CCCCCCceeeeeccCcCcceeEEEEEEEEecCCCCeEEEEEEEcCCCCeEEEEecCeeEeccCceEEEEEEEEEecc
Q 004278 652 ENLNYPSIAALFSTQSRGVSSKSFIRTVTNVGQPNAVYTVKVVSPEKGVTVTVKPSRLVFTEGVKKSSFVVTVTADS 728 (764)
Q Consensus 652 ~~lN~ps~~~~~~~~~~~~~~~~~~rtvtNvg~~~~ty~~~~~~p~~g~~v~v~p~~l~~~~~~~~~~~~vt~~~~~ 728 (764)
..||++...+. .+.+.+.+|+|+|+.+..|+.....| .+|+|....+ ++|++..++|+|....
T Consensus 30 ~~l~fg~~~v~--------~~~~~~~~l~N~g~~~~~f~~~~~~~-----F~i~P~~g~L-~pg~~~~i~V~F~P~~ 92 (122)
T 2ys4_A 30 DKLNFSTCPVK--------YSTQKILLVRNIGNKNAVFHIKTCRP-----FSIEPAIGTL-NVGESMQLEVEFEPQS 92 (122)
T ss_dssp SEECCCSEESS--------SCEEEEEEEECCSSSCEEEEEECCTT-----EEEESSEEEE-CTTCEEEEEEEECCSS
T ss_pred CeeecCCeecC--------CeEEEEEEEEECCCCCEEEEEecCCC-----eEEECCcCEE-CCCCEEEEEEEEEcCC
Confidence 34666555442 46778889999999999998877655 6779999999 6999999999999764
No 45
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=92.90 E-value=0.12 Score=56.65 Aligned_cols=40 Identities=25% Similarity=0.298 Sum_probs=36.7
Q ss_pred CCccceeEEEEecCCCchhhHHHHHHHcCceEEEEeccCC
Q 004278 405 PNLVRGKIVICDRGSSPRVAKGLVVKKAGGVGMILANGIS 444 (764)
Q Consensus 405 ~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~ 444 (764)
..+++|||+|+.++.|.+..|..+++++||.|+|++++..
T Consensus 110 ~~dv~GkIvlv~~g~~~~~~k~~~A~~~GA~gvIi~~~~~ 149 (421)
T 2ek8_A 110 GKDLNGKIALIQRGNISFADKVRNAAKQGAKAVIIYNNTD 149 (421)
T ss_dssp TSCCTTSEEEEECCSSCHHHHHHHHHHTTCSEEEEECSSS
T ss_pred CCCcCceEEEEeCCCCCHHHHHHHHHHCCCeEEEEEeCCC
Confidence 3479999999999999999999999999999999998753
No 46
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=90.68 E-value=0.16 Score=59.33 Aligned_cols=39 Identities=33% Similarity=0.278 Sum_probs=36.2
Q ss_pred CCccceeEEEEecCCCchhhHHHHHHHcCceEEEEeccC
Q 004278 405 PNLVRGKIVICDRGSSPRVAKGLVVKKAGGVGMILANGI 443 (764)
Q Consensus 405 ~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~ 443 (764)
..+++|||+|+++|.|.+..|..+++++||.|+|++++.
T Consensus 150 ~~~v~GkIvlv~~G~~~~~~Kv~~A~~~GA~gviiy~dp 188 (707)
T 3fed_A 150 GINCTGKIVIARYGKIFRGNKVKNAMLAGAIGIILYSDP 188 (707)
T ss_dssp CCCCTTCEEEEECCSSCHHHHHHHHHHTTCSEEEEECCH
T ss_pred CCCCCCeEEEEECCCCCHhHHHHHHHHCCCEEEEEEcCc
Confidence 357999999999999999999999999999999999864
No 47
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=90.20 E-value=0.19 Score=58.09 Aligned_cols=39 Identities=21% Similarity=0.265 Sum_probs=36.6
Q ss_pred CccceeEEEEecCCCchhhHHHHHHHcCceEEEEeccCC
Q 004278 406 NLVRGKIVICDRGSSPRVAKGLVVKKAGGVGMILANGIS 444 (764)
Q Consensus 406 ~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~ 444 (764)
.+++|||+|+.+|.|.+..|..+++++||.|+|++++..
T Consensus 128 vdv~GkIvlv~~g~~~~~~K~~~A~~~GA~gvii~~~~~ 166 (640)
T 3kas_A 128 TPVNGSIVIVRAGKITFAEKVANAESLNAIGVLIYMDQT 166 (640)
T ss_dssp SCCTTSEEEEESCSSCHHHHHHHHHTTTCSEEEEECCTT
T ss_pred cccCCcEEEEecCCCCHHHHHHHHHHCCCeEEEEEeccc
Confidence 479999999999999999999999999999999999764
No 48
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=85.83 E-value=0.35 Score=59.55 Aligned_cols=24 Identities=33% Similarity=0.606 Sum_probs=22.3
Q ss_pred CCCCCCcEEEEEecCCCCCCCCcc
Q 004278 129 SDYGSDVIIGVFDTGIWPERRSFS 152 (764)
Q Consensus 129 ~~~G~gv~VgVIDtGid~~Hp~f~ 152 (764)
.+.|+||+|||+||||||.+|-|.
T Consensus 32 ~ydGrgv~iai~DtGVDP~a~glq 55 (1354)
T 3lxu_X 32 EYDGRDVTIAIFDSGVDPRATGLE 55 (1354)
T ss_dssp TCSSTTCEEEEEESCCCTTSTTSS
T ss_pred CCCCCccEEEEEeCCCCCCCCcce
Confidence 578999999999999999999985
No 49
>2e6j_A Hydin protein; PAPD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=85.40 E-value=0.36 Score=42.08 Aligned_cols=57 Identities=12% Similarity=0.214 Sum_probs=42.9
Q ss_pred eeEEEEEEEEecCCCCeEEEEEEEcCCCCeEEEEecCeeEeccCceEEEEEEEEEecc
Q 004278 671 SSKSFIRTVTNVGQPNAVYTVKVVSPEKGVTVTVKPSRLVFTEGVKKSSFVVTVTADS 728 (764)
Q Consensus 671 ~~~~~~rtvtNvg~~~~ty~~~~~~p~~g~~v~v~p~~l~~~~~~~~~~~~vt~~~~~ 728 (764)
...+.+.+++|.|+.+..|+........+...+++|..-.+ ++|++++++|+|....
T Consensus 26 ~~~~~~~~l~N~g~~p~~~~~~~~~~~~~~~f~v~p~~g~i-~pg~~~~i~V~f~~~~ 82 (112)
T 2e6j_A 26 SAHCYEAILYNKGSIDALFNMTPPTSALGACFVFSPKEGII-EPSGVQAIQISFSSII 82 (112)
T ss_dssp CCEEEEEEEEECCSSCEEEEECCCSSHHHHHCEEESSEEEE-CTTBCCEEEEEECCCC
T ss_pred CEEEEEEEEEECCcceEEEEEecCCccccCcEEEECCcCEE-CCCCEEEEEEEEECCC
Confidence 34667788999999999998833111023347779999888 6899999999999754
No 50
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=84.64 E-value=0.62 Score=51.39 Aligned_cols=32 Identities=25% Similarity=0.268 Sum_probs=27.0
Q ss_pred cCCCeeecccCCCCCCCCCCCCCCcEEcCCCcEEecccCC
Q 004278 478 KPAPVVASFSARGPNGLNPEILKPDLIAPGVNILAAWTEA 517 (764)
Q Consensus 478 ~~~~~~a~fSS~Gp~~~~~~~lKPDI~APG~~I~sa~~~~ 517 (764)
...+.++.||++||. +||+|||++|+++++.+
T Consensus 181 ~~~~~~~~~S~~g~~--------vdv~ApG~~i~s~~~~g 212 (441)
T 1y9z_A 181 DSNLDHAAFSQYTDQ--------VEISGPGEAILSTVTVG 212 (441)
T ss_dssp CTTCCBCTTSCCCTT--------EEEEEECSSEEEECSTT
T ss_pred CCCCCCCccccCCCc--------eEEEeccCCeeccccCC
Confidence 345678999999985 69999999999998754
No 51
>3qbt_B Inositol polyphosphate 5-phosphatase OCRL-1; protein transport, vesicular trafficking, GTPase, LOWE syndr immunoglobulin fold, RAB8A, endocytosis; HET: GNP; 2.00A {Homo sapiens}
Probab=84.02 E-value=4.3 Score=36.99 Aligned_cols=90 Identities=10% Similarity=-0.008 Sum_probs=59.4
Q ss_pred eeEEEEEEEEecCCCCeEEEEEEEcCC---CCeEEEEecCeeEeccCceEEEEEEEEEeccc---ccccCCCccEEEEEE
Q 004278 671 SSKSFIRTVTNVGQPNAVYTVKVVSPE---KGVTVTVKPSRLVFTEGVKKSSFVVTVTADSK---NLVLNDSGAAFGSIS 744 (764)
Q Consensus 671 ~~~~~~rtvtNvg~~~~ty~~~~~~p~---~g~~v~v~p~~l~~~~~~~~~~~~vt~~~~~~---~~~~~~~~~~~G~~~ 744 (764)
...+.+.+++|.|..+.+|++...... ..--++|+|..-++ .+|++.+++|++.+... .+.....- ..--|+
T Consensus 43 ~~~~~~l~I~Ntg~vpa~F~f~~~~~~~~~~~~wl~v~P~~G~L-~Pge~~~I~v~~~v~~~~~~~ln~g~~~-l~diLv 120 (140)
T 3qbt_B 43 QLQKEKFQISNNGQVPCHFSFIPKLNDSQYCKPWLRAEPFEGYL-EPNETVDISLDVYVSKDSVTILNSGEDK-IEDILV 120 (140)
T ss_dssp CCEEEEEEEEECSSSCEEEEEECCTTCSSSSCTTEEEESCEEEE-CTTCEEEEEEEECBCHHHHHHHHHSSSC-SCEEEE
T ss_pred eeeeeEEEEEcCCccceEEEEecCCCchhhhhHhhhcCCccccc-CCCCeeEEEEEEEEccCcccccccchhh-hheeEE
Confidence 345667889999999999999743210 11236678999888 79999999999986431 00011111 344566
Q ss_pred EE-CCccEEEEEEEEEecC
Q 004278 745 WS-DGKHEVRSPLVVTQLD 762 (764)
Q Consensus 745 ~~-~~~~~v~~p~~v~~~~ 762 (764)
+. +++....+|+...+.+
T Consensus 121 L~Ve~G~d~fI~v~g~~~p 139 (140)
T 3qbt_B 121 LHLDRGKDYFLTISGNYLP 139 (140)
T ss_dssp EEETTSCEEEEEEEEEECC
T ss_pred EEeecCCcEEEEEeccccC
Confidence 64 5777778888776543
No 52
>2r39_A FIXG-related protein; structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, iron, iron-sulfur; 2.02A {Vibrio parahaemolyticus}
Probab=79.62 E-value=7.3 Score=34.18 Aligned_cols=54 Identities=17% Similarity=0.167 Sum_probs=44.5
Q ss_pred eEEEEEEEEecCCCCeEEEEEEEcCCCCeEEEEecCeeEeccCceEEEEEEEEEecc
Q 004278 672 SKSFIRTVTNVGQPNAVYTVKVVSPEKGVTVTVKPSRLVFTEGVKKSSFVVTVTADS 728 (764)
Q Consensus 672 ~~~~~rtvtNvg~~~~ty~~~~~~p~~g~~v~v~p~~l~~~~~~~~~~~~vt~~~~~ 728 (764)
.-..+..+.|....+.+|++++... +|+++. .|..+.+ ++++..++.|.+.+..
T Consensus 32 ~N~Ytlki~Nkt~~~~~~~l~v~g~-~~l~~~-g~~~i~v-~~g~~~~~~v~v~~~~ 85 (118)
T 2r39_A 32 ENTYTLKVINKTQQVQEYNLDVKGL-NDVSWY-GKQTIQV-EPGEVLNLPMSLGADP 85 (118)
T ss_dssp EEEEEEEEEECSSSCEEEEEEEESC-SSCEEE-SCCEEEE-CTTCEEEEEEEEEECG
T ss_pred EEEEEEEEEECCCCCEEEEEEEeCC-cccEEe-CCCcEEE-CCCCEEEEEEEEEECh
Confidence 4457788999999999999999987 776653 3556887 7999999999999876
No 53
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=76.95 E-value=2 Score=47.23 Aligned_cols=59 Identities=12% Similarity=0.131 Sum_probs=41.0
Q ss_pred CceeeEEecCCCCccccccccCCCCCCCccceeEEEEecCCCc---------hhhH----HHHHHHcCceEEEEeccCC
Q 004278 379 EKMYPLIYPGKSGVLSASLCMENSLDPNLVRGKIVICDRGSSP---------RVAK----GLVVKKAGGVGMILANGIS 444 (764)
Q Consensus 379 ~~~~plv~~~~~~~~~~~~C~~~~~~~~~~~gkivl~~~g~~~---------~~~~----~~~~~~~Ga~g~i~~n~~~ 444 (764)
...-++|+..+ ...|.. ..+.+++|||||+.++.|. +..| ..++.++||+|+|++|+..
T Consensus 105 ~vta~lV~v~~-----~~~~~~--~~~~dvkGKIVlv~~~~~~~~~~~~y~~~~~kr~~~a~~A~~aGA~avIi~~~~~ 176 (444)
T 3iib_A 105 GLSATIVRFDT-----LQDLQN--AEAGSLNDKIAFIDAKTERHRDGKGYGQTASGRSRGAVAAAEKGAVGIIIRSIGT 176 (444)
T ss_dssp CEEEEEEEESS-----HHHHHT--SCTTTTTTCEEEECCCCCCCTTCHHHHHHHHHHHHHHHHHHHTTCSEEEEECSCS
T ss_pred CeEEEEEecCC-----HHHHhh--ccccccCccEEEEeCCCCCCcccccccchhhhhhhHHHHHHHCCCeEEEEEccCC
Confidence 45667777542 222332 2356899999999998874 3344 3569999999999998643
No 54
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=74.69 E-value=8.4 Score=37.82 Aligned_cols=53 Identities=13% Similarity=0.142 Sum_probs=39.7
Q ss_pred eeEEEEEEEEecCCCCeEEEEEEEcCCCCeEEEEecCeeEeccCceEEEEEEEEEecc
Q 004278 671 SSKSFIRTVTNVGQPNAVYTVKVVSPEKGVTVTVKPSRLVFTEGVKKSSFVVTVTADS 728 (764)
Q Consensus 671 ~~~~~~rtvtNvg~~~~ty~~~~~~p~~g~~v~v~p~~l~~~~~~~~~~~~vt~~~~~ 728 (764)
...+.+.+++|.|+.+.+++... .| .-+++..+|..| ++|++.+++|+++...
T Consensus 19 ~~~~~~~~i~N~g~~pl~i~~~~-~p-~~~~~~~~~~~I---~PG~~g~I~vt~~~~~ 71 (220)
T 2qsv_A 19 DEGVVRLVVNNTDESDLQVAVVS-LP-SFVSLDDRAFRL---QAREPRELNLSLAVPR 71 (220)
T ss_dssp CCCEEEEEEEECSSSCEEEEEEE-CC-TTEECSCCEEEE---CSSSCEEEEEEECCCT
T ss_pred CcceEEEEEEeCCCCceEEEecc-CC-CceEeeeCccee---CCCCceEEEEEEcchh
Confidence 34566888999999988887653 36 566665555555 7899999999998765
No 55
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=63.74 E-value=24 Score=31.40 Aligned_cols=50 Identities=14% Similarity=0.100 Sum_probs=35.7
Q ss_pred eeEEEEEEEEecCCCC-eEEEEEEEcCCCCeEEEEecCeeEeccCceEEEEEEEEE
Q 004278 671 SSKSFIRTVTNVGQPN-AVYTVKVVSPEKGVTVTVKPSRLVFTEGVKKSSFVVTVT 725 (764)
Q Consensus 671 ~~~~~~rtvtNvg~~~-~ty~~~~~~p~~g~~v~v~p~~l~~~~~~~~~~~~vt~~ 725 (764)
...+++.+|+|.|..+ ..|++.+..- |-.+.-. ...+ ++|++++++++..
T Consensus 33 ~~~ti~vtV~N~G~~~a~~~~V~lyvn--g~~v~t~--~v~L-a~G~s~tv~f~~~ 83 (127)
T 3idu_A 33 KLAEYEVHVKNLGGIGVPSTKVRVYIN--GTLYKNW--TVSL-GPKEEKVLTFNWT 83 (127)
T ss_dssp CCEEEEEEEEECSSSCEEEEEEEEEET--TEEEEEE--EEEE-CTTCEEEEEEEEC
T ss_pred CEEEEEEEEEECCCCccCCcEEEEEEC--CEEEeeE--Eecc-CCCCeEEEEEEEE
Confidence 5789999999999865 5687776543 5555433 2345 6888888777775
No 56
>3qis_A Inositol polyphosphate 5-phosphatase OCRL-1; DENT disease, RAC1, RAB gtpases, APPL1, endocytic PATH golgi complex, hydrolase-protein binding complex; 2.30A {Homo sapiens} PDB: 2qv2_A
Probab=61.51 E-value=16 Score=38.80 Aligned_cols=89 Identities=10% Similarity=0.034 Sum_probs=56.4
Q ss_pred eeEEEEEEEEecCCCCeEEEEEEEcCCCCeE---EEEecCeeEeccCceEEEEEEEEEecccc---cccCCCccEEEEEE
Q 004278 671 SSKSFIRTVTNVGQPNAVYTVKVVSPEKGVT---VTVKPSRLVFTEGVKKSSFVVTVTADSKN---LVLNDSGAAFGSIS 744 (764)
Q Consensus 671 ~~~~~~rtvtNvg~~~~ty~~~~~~p~~g~~---v~v~p~~l~~~~~~~~~~~~vt~~~~~~~---~~~~~~~~~~G~~~ 744 (764)
...+-+.|++|+|..+.+|++.-........ ++|+|..-++ .+|++.+++|++.+.... +..+... ..--|+
T Consensus 46 ~~~~~~l~i~N~g~~pa~f~f~~~~~~~~~~~~wl~v~p~~g~l-~Pge~~~i~l~~~v~~~~~~~ln~g~~~-l~diLv 123 (366)
T 3qis_A 46 QLQKEKFQISNNGQVPCHFSFIPKLNDSQYCKPWLRAEPFEGYL-EPNETVDISLDVYVSKDSVTILNSGEDK-IEDILV 123 (366)
T ss_dssp CCEEEEEEEEECSSSCEEEEEECCTTCSSSSCTTEEEESCEEEE-CTTCEEEEEEEECBCTTTHHHHHHTSSC-SCEEEE
T ss_pred CeEEEEEEEEecCCceEEEEEEeCCCCCCCCCCcEEEeCCccEE-CCCCEEEEEEEEEECHHHHHHHhcCccc-cceEEE
Confidence 4566778899999999999996543311122 7789999888 799999999999876410 0000111 233455
Q ss_pred EE-CCccEEEEEEEEEec
Q 004278 745 WS-DGKHEVRSPLVVTQL 761 (764)
Q Consensus 745 ~~-~~~~~v~~p~~v~~~ 761 (764)
+. ++++...+|+-..+.
T Consensus 124 L~ve~G~d~FI~v~~~~~ 141 (366)
T 3qis_A 124 LHLDRGKDYFLTISGNYL 141 (366)
T ss_dssp EEETTSCEEEEEEEEEEC
T ss_pred EEEeCCCcEEEEeccccC
Confidence 54 455555666655543
No 57
>1z9l_A Vesicle-associated membrane protein-associated protein A; VAP-A, cytoplasmic domain, protein binding; HET: MSE; 1.70A {Rattus norvegicus} PDB: 1z9o_A 2rr3_A 3ikk_A
Probab=51.47 E-value=54 Score=28.87 Aligned_cols=52 Identities=15% Similarity=0.184 Sum_probs=43.0
Q ss_pred eEEEEEEEEecCCCCeEEEEEEEcCCCCeEEEEecCeeEeccCceEEEEEEEEEec
Q 004278 672 SKSFIRTVTNVGQPNAVYTVKVVSPEKGVTVTVKPSRLVFTEGVKKSSFVVTVTAD 727 (764)
Q Consensus 672 ~~~~~rtvtNvg~~~~ty~~~~~~p~~g~~v~v~p~~l~~~~~~~~~~~~vt~~~~ 727 (764)
..+-+.+++|.++...-|.+....| . ...|.|..=.+ .+|++..+.|++...
T Consensus 28 ~~~~~l~L~N~s~~~vaFKVKTT~p-~--~y~VrP~~G~i-~P~~s~~v~V~~~~~ 79 (128)
T 1z9l_A 28 VVTTNLKLQNPSDRKVCFKVKTTAP-R--RYCVRPNSGVI-DPGSIVTVSVMLQPF 79 (128)
T ss_dssp CEEEEEEEECCSSSCEEEEEEESCG-G--GEEEESCEEEE-CTTCEEEEEEEECCC
T ss_pred eEEEEEEEECCCCCeEEEEEECCCC-C--ceEEeCCCcEE-CCCCeEEEEEEECcC
Confidence 4566788999999999999999988 4 46678988776 799999999998754
No 58
>3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A*
Probab=48.91 E-value=1.2e+02 Score=36.02 Aligned_cols=166 Identities=14% Similarity=0.085 Sum_probs=87.2
Q ss_pred eeEEeccccchhhhHHHHHHHHhhhCCCCC-HHHHHHHHHhccccccCCCCCCCccCCCCCCCCCCCCCCcccccccCCC
Q 004278 531 EFNILSGTSMACPHVSGAAALLKSAHPDWS-PAAIRSAMMTTASIVDNSNQPMTDEATGNASTPYDFGAGHVNLDRAMDP 609 (764)
Q Consensus 531 ~y~~~sGTSmAaP~VAGvaALl~~~~P~~s-p~~ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~G~G~vn~~~Al~~ 609 (764)
-...++|..++-|-+.-+.|+|..-+|.-- ...|-++|.--..+-...-..+.......|.. ..|.. ..
T Consensus 618 VVVl~sG~pv~m~w~~~v~AIL~aw~pGqegG~AiAdVLfG~vNPSGkLP~T~p~~~~d~P~~-~~~~~---------~~ 687 (845)
T 3abz_A 618 VIVNQSGTPVEFPWLEDANALVQAWYGGNELGNAIADVLYGDVVPNGKLSLSWPFKLQDNPAF-LNFKT---------EF 687 (845)
T ss_dssp EEEEECSSCCCCTTGGGCSEEEECCCCCTTHHHHHHHHHTTSSCCCCCCSSCBCSSGGGSTTT-TSCSC---------BT
T ss_pred EEEEeCCCcccCcchhccCeEEEcCCCcHHHHHHHHHHhcCCcCCCCCCceeeeCchhhCCcc-ccCCC---------CC
Confidence 456789999998988888999999999765 57788888765544211100111000011110 01110 01
Q ss_pred C-ceecCCc-hhhhhhhccCCCCccceeEeecccccCCCCCCCCCCCCCCceeee--eccCcCcceeEEEEEEEEecC-C
Q 004278 610 G-LVYDITN-DDYVNFLCANGYGPKLIQVITRIPARCPAKRPRPENLNYPSIAAL--FSTQSRGVSSKSFIRTVTNVG-Q 684 (764)
Q Consensus 610 g-lv~d~~~-~dy~~~lc~~~~~~~~~~~~~~~~~~c~~~~~~~~~lN~ps~~~~--~~~~~~~~~~~~~~rtvtNvg-~ 684 (764)
+ ..|..+. .+|.-|.- . .+...-++..-|.|-+|... ...-.. ...+++.+|||+| +
T Consensus 688 g~~~y~eg~~vgYR~y~~------~----------~~~plfPFG~GLSYTtF~ys~~~l~v~~--~~~~v~v~V~NtG~~ 749 (845)
T 3abz_A 688 GRVIYGEDIFVGYRYYEK------L----------QRKVAFPFGYGLSYTTFELDISDFKVTD--DKIAISVDVKNTGDK 749 (845)
T ss_dssp TEEECTTTTCCTHHHHHH------H----------TCCCSBCTTCCBCSSCEEEEEEEEEECS--SEEEEEEEEEECCSS
T ss_pred CceeccCCccCCCcchhc------C----------CCceeecccCCCcceeEEEecccccccC--CeEEEEEEEEECCcC
Confidence 1 2232221 12322210 0 11222225557888888876 332111 5688999999999 7
Q ss_pred CCeEEE--EEEEcCCCCe----EEEEecCeeEeccCceEEEEEEEEE
Q 004278 685 PNAVYT--VKVVSPEKGV----TVTVKPSRLVFTEGVKKSSFVVTVT 725 (764)
Q Consensus 685 ~~~ty~--~~~~~p~~g~----~v~v~p~~l~~~~~~~~~~~~vt~~ 725 (764)
....-. +-+..|...+ +--.--+++.+ ++||+++++++|.
T Consensus 750 ~~G~eVvQlYv~~~~~~~~~P~k~L~gF~kv~L-~pGes~~V~~~l~ 795 (845)
T 3abz_A 750 FAGSEVVQVYFSALNSKVSRPVKELKGFEKVHL-EPGEKKTVNIDLE 795 (845)
T ss_dssp CCEEEEEEEEEEESSCSSCCCSCEEEEEEEEEE-CTTCEEEEEEEEE
T ss_pred CCcceeeeeeEeCCCCCcchhhheeccceeEEE-CCCCEEEEEEEeC
Confidence 654433 3334441111 11111223445 7999999999998
No 59
>3zyz_A Beta-D-glucoside glucohydrolase; HET: NAG BGC; 2.10A {Hypocrea jecorina} PDB: 3zz1_A* 4i8d_A*
Probab=48.59 E-value=51 Score=38.31 Aligned_cols=55 Identities=9% Similarity=0.116 Sum_probs=34.9
Q ss_pred eeEEEEEEEEecCCCCeEEEEE--EEcCCCCe-----EEEEecCeeEeccCceEEEEEEEEEec
Q 004278 671 SSKSFIRTVTNVGQPNAVYTVK--VVSPEKGV-----TVTVKPSRLVFTEGVKKSSFVVTVTAD 727 (764)
Q Consensus 671 ~~~~~~rtvtNvg~~~~ty~~~--~~~p~~g~-----~v~v~p~~l~~~~~~~~~~~~vt~~~~ 727 (764)
...+++.+|||+|+....-.+. +..| .+. +--.--+++.+ ++||+++++++|...
T Consensus 613 ~~~~vsv~VtNtG~~~G~EVvQlYv~~~-~~~~~~P~k~L~gF~kv~L-~pGes~~V~~~l~~~ 674 (713)
T 3zyz_A 613 NVATVTVDIANSGQVTGAEVAQLYITYP-SSAPRTPPKQLRGFAKLNL-TPGQSGTATFNIRRR 674 (713)
T ss_dssp EEEEEEEEEEECSSSCEEEEEEEEEECC-TTSSSCCSCEEEEEEEEEE-CTTCEEEEEEEEEGG
T ss_pred CeEEEEEEEEeCCCCccceeeeeeeecC-CCCCCchhHHhhhccccee-CCCCeEEEEEEEcHH
Confidence 4578999999999876554433 4445 221 11111223445 799999999999864
No 60
>1row_A SSP-19, MSP-domain protein like family member; beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=47.85 E-value=60 Score=27.92 Aligned_cols=49 Identities=18% Similarity=0.211 Sum_probs=40.0
Q ss_pred EEEEEEecCCCCeEEEEEEEcCCCCeEEEEecCeeEeccCceEEEEEEEEEec
Q 004278 675 FIRTVTNVGQPNAVYTVKVVSPEKGVTVTVKPSRLVFTEGVKKSSFVVTVTAD 727 (764)
Q Consensus 675 ~~rtvtNvg~~~~ty~~~~~~p~~g~~v~v~p~~l~~~~~~~~~~~~vt~~~~ 727 (764)
-+.+++|.++....|.+....| .- ..|.|..=.+ ++|++.++.|++...
T Consensus 19 ~~l~L~N~t~~~vaFKVKtT~p-~~--y~VrP~~G~I-~P~~~~~i~I~~q~~ 67 (109)
T 1row_A 19 STHKLVNGGAEKIVFKIKSSNN-NE--YRIAPVFGFV-DPSGSKDVVITRTAG 67 (109)
T ss_dssp EEEEEEECSSSCEEEEEEESCS-SS--EEEECSEEEE-CTTEEEEEEEEECSC
T ss_pred EEEEEEcCCCCeEEEEEEeCCC-Cc--eEEcCCceEE-CCCCeEEEEEEeCCC
Confidence 4678889999999999998888 44 5668987666 799999999988753
No 61
>1m1s_A WR4; structural genomics, major sperm protein, bioinformatics, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=45.21 E-value=52 Score=28.72 Aligned_cols=50 Identities=14% Similarity=0.167 Sum_probs=40.0
Q ss_pred EEEEEEEecCCCCeEEEEEEEcCCCCeEEEEecCeeEeccCceEEEEEEEEEec
Q 004278 674 SFIRTVTNVGQPNAVYTVKVVSPEKGVTVTVKPSRLVFTEGVKKSSFVVTVTAD 727 (764)
Q Consensus 674 ~~~rtvtNvg~~~~ty~~~~~~p~~g~~v~v~p~~l~~~~~~~~~~~~vt~~~~ 727 (764)
+.+.+++|.++....|.+....| .- ..|.|..=.+ ++|++.++.|+....
T Consensus 26 ~~~l~L~N~t~~~vAFKVKtT~p-~~--YrVrP~~G~I-~Pg~~~~I~I~~q~~ 75 (116)
T 1m1s_A 26 NSTHNITSESDSRLAFKVKSSNN-EH--YRVRPVYGFV-DAKGKSKLDINRLPG 75 (116)
T ss_dssp EEEEEEEECSSSEEEEEEEESCT-TT--EEEECSEEEE-CTTCEEEEEEEECSC
T ss_pred EEEEEEECCCCCeEEEEEEecCC-Cc--eEEcCCceEE-CCCCeEEEEEEeCCC
Confidence 45678889999989999998888 44 5667886666 799999999988754
No 62
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=44.97 E-value=60 Score=31.53 Aligned_cols=54 Identities=13% Similarity=0.128 Sum_probs=36.4
Q ss_pred eeEEEEEEEEecCCCCeEEEEEEEcCCCCeEEEEecCeeEeccCceEEEEEEEEEecc
Q 004278 671 SSKSFIRTVTNVGQPNAVYTVKVVSPEKGVTVTVKPSRLVFTEGVKKSSFVVTVTADS 728 (764)
Q Consensus 671 ~~~~~~rtvtNvg~~~~ty~~~~~~p~~g~~v~v~p~~l~~~~~~~~~~~~vt~~~~~ 728 (764)
...+.+++++|+|+.+...+ .+... .|...- ++..-.+ ++||+.+++|+++...
T Consensus 134 ~~~~~~f~i~N~G~~pL~I~-~v~~s-cgct~~-~~~~~~i-~PGe~~~i~v~~~~~~ 187 (220)
T 2qsv_A 134 ETTKAAIEIRNVGAGPLRLH-SVTTR-NPALTA-VPDRTEI-KPGGSTLLRIAVDPQV 187 (220)
T ss_dssp SCEEEEEEEEECSSSCEEEE-EEEEC-STTEEE-EESCSEE-CTTCEEEEEEEECHHH
T ss_pred CeEEEEEEEEECCCCCEEEE-EEEeC-CCCEee-ecCCccC-CCCCEEEEEEEEecCC
Confidence 45677889999999887764 23334 444332 3333344 7999999999998654
No 63
>2x41_A Beta-glucosidase; hydrolase, TIM barrel fold, fibronectin type III fold; HET: BGC; 2.05A {Thermotoga neapolitana} PDB: 2x40_A* 2x42_A*
Probab=44.42 E-value=53 Score=38.22 Aligned_cols=78 Identities=12% Similarity=0.074 Sum_probs=44.8
Q ss_pred CCCCCCCCceeeeeccCcCcceeEEEEEEEEecCCCCe--EEEEEEEcCCCCe----EEEEecCee-EeccCceEEEEEE
Q 004278 650 RPENLNYPSIAALFSTQSRGVSSKSFIRTVTNVGQPNA--VYTVKVVSPEKGV----TVTVKPSRL-VFTEGVKKSSFVV 722 (764)
Q Consensus 650 ~~~~lN~ps~~~~~~~~~~~~~~~~~~rtvtNvg~~~~--ty~~~~~~p~~g~----~v~v~p~~l-~~~~~~~~~~~~v 722 (764)
+..-|.|-+|......-.......+++.+|||+|+... +-.+-+..|..++ +--.--+++ .+ ++||++++++
T Consensus 594 FG~GLSYTtF~ys~~~~~~~~~~~~v~v~VtNtG~~~G~eVvQlYv~~~~~~~~~P~k~L~gF~kv~~L-~pGes~~V~~ 672 (721)
T 2x41_A 594 FGYGLSYTTFEYSDLNVSFDGETLRVQYRIENTGGRAGKEVSQVYIKAPKGKIDKPFQELKAFHKTRLL-NPGESEEVVL 672 (721)
T ss_dssp TTCCBCSSCEEEEEEEEEECSSEEEEEEEEEECSSSCBCCEEEEEEECCCSSSCCCSCEEEEEEECCCB-CTTCEEEEEE
T ss_pred cCCCCCcceeEeeceEeecCCCeEEEEEEEEECCCCCCcEEeeEEEccCCCCCCCchHHhhcccccccC-CCCCeEEEEE
Confidence 44567887777654321000046889999999998554 4444445551111 111111234 34 7999999999
Q ss_pred EEEecc
Q 004278 723 TVTADS 728 (764)
Q Consensus 723 t~~~~~ 728 (764)
+|....
T Consensus 673 ~l~~~~ 678 (721)
T 2x41_A 673 EIPVRD 678 (721)
T ss_dssp EEEGGG
T ss_pred EECHHH
Confidence 998643
No 64
>1msp_A MSP, major sperm protein; cytoskeletal protein, cell motility protein; 2.50A {Ascaris suum} SCOP: b.1.11.2 PDB: 3msp_A 2bvu_A 2msp_A 1grw_A
Probab=44.29 E-value=59 Score=28.65 Aligned_cols=51 Identities=18% Similarity=0.274 Sum_probs=41.8
Q ss_pred EEEEEEEEecCCCCeEEEEEEEcCCCCeEEEEecCeeEeccCceEEEEEEEEEec
Q 004278 673 KSFIRTVTNVGQPNAVYTVKVVSPEKGVTVTVKPSRLVFTEGVKKSSFVVTVTAD 727 (764)
Q Consensus 673 ~~~~rtvtNvg~~~~ty~~~~~~p~~g~~v~v~p~~l~~~~~~~~~~~~vt~~~~ 727 (764)
.+-..+++|.++..--|.+....| .- ..|.|..=.+ .+|++..+.|++...
T Consensus 27 ~~~~l~l~N~s~~~vaFKVKTT~p-~~--y~VrP~~Gii-~P~~s~~v~V~~q~~ 77 (126)
T 1msp_A 27 HTYHIKITNAGGRRIGWAIKTTNM-RR--LSVDPPCGVL-DPKEKVLMAVSCDTF 77 (126)
T ss_dssp CCEEEEEEECSSSCEEEEEEESCT-TT--EEEESCEEEE-CTTCEEEEEEEECCC
T ss_pred eEEEEEEECCCCCeEEEEEEcCCC-Cc--EEEECCCeEE-CCCCEEEEEEEecCC
Confidence 445678899999999999999988 54 5668998777 799999999988763
No 65
>1wic_A Hypothetical protein riken cDNA 6030424E15; beta sandwich fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.11.2
Probab=43.34 E-value=52 Score=30.10 Aligned_cols=52 Identities=21% Similarity=0.300 Sum_probs=42.7
Q ss_pred eEEEEEEEEecCCCCeEEEEEEEcCCCCeEEEEecCeeEeccCceEEEEEEEEEec
Q 004278 672 SKSFIRTVTNVGQPNAVYTVKVVSPEKGVTVTVKPSRLVFTEGVKKSSFVVTVTAD 727 (764)
Q Consensus 672 ~~~~~rtvtNvg~~~~ty~~~~~~p~~g~~v~v~p~~l~~~~~~~~~~~~vt~~~~ 727 (764)
.++-..+++|.++....|.+....| . ...|.|..=.+ .++++.+++|++...
T Consensus 36 ~~~~~l~L~N~s~~~VaFKVKTT~p-~--~y~VrP~~GiI-~P~~s~~V~V~lq~~ 87 (152)
T 1wic_A 36 EKKTLIVLTNVTKNIVAFKVRTTAP-E--KYRVKPSNSSC-DPGASIDIIVSPHGG 87 (152)
T ss_dssp CCCEEEEEEBCSSSCEEEEEEESCT-T--TEEEESSEEEE-CTTCEEEEEEEECSS
T ss_pred eEEEEEEEEcCCCCeEEEEEECCCC-C--ceeecCCCcEE-CCCCeEEEEEEecCc
Confidence 3445788999999999999999988 4 46668998777 799999999998754
No 66
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A*
Probab=39.97 E-value=1.5e+02 Score=33.15 Aligned_cols=64 Identities=16% Similarity=0.038 Sum_probs=43.6
Q ss_pred CCCceeeeeccCcCcceeEEEEEEEEecCCCCeEE-EEEEEcCCCCeEEEEecCeeEeccCceEEEEEEEEEecc
Q 004278 655 NYPSIAALFSTQSRGVSSKSFIRTVTNVGQPNAVY-TVKVVSPEKGVTVTVKPSRLVFTEGVKKSSFVVTVTADS 728 (764)
Q Consensus 655 N~ps~~~~~~~~~~~~~~~~~~rtvtNvg~~~~ty-~~~~~~p~~g~~v~v~p~~l~~~~~~~~~~~~vt~~~~~ 728 (764)
..|.+++... ++.+++.+|+|-+..+..- ++++..| .|.+++. ....+ ++|++.+++++|+...
T Consensus 363 ~~~~~~~~~g------~~~~~~~~vtn~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~-~~g~~~t~~~~vt~~~ 427 (601)
T 1w8o_A 363 TIPDVALEPG------QQVTVPVAVTNQSGIAVPKPSLQLDAS-PDWQVQG--SVEPL-MPGRQAKGQVTITVPA 427 (601)
T ss_dssp ECCCEEECTT------CEEEEEEEEECCSSSCBSSCEEEEECC-TTSEEEE--EECCB-CTTCEEEEEEEEECCT
T ss_pred cCccceecCC------ceeEEEEEEECCCceeccCceEEEecC-CCcEEec--ccccc-CCCCceEEEEEEecCC
Confidence 4577776532 5788899999976533211 3346668 8888876 34455 6799999988888765
No 67
>2cri_A Vesicle-associated membrane protein-associated protein A; VAP-A, VAP-33, beta sandwitch fold, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=37.52 E-value=80 Score=28.57 Aligned_cols=52 Identities=13% Similarity=0.177 Sum_probs=42.3
Q ss_pred eEEEEEEEEecCCCCeEEEEEEEcCCCCeEEEEecCeeEeccCceEEEEEEEEEec
Q 004278 672 SKSFIRTVTNVGQPNAVYTVKVVSPEKGVTVTVKPSRLVFTEGVKKSSFVVTVTAD 727 (764)
Q Consensus 672 ~~~~~rtvtNvg~~~~ty~~~~~~p~~g~~v~v~p~~l~~~~~~~~~~~~vt~~~~ 727 (764)
..+-..+++|.++...-|.+....| .- ..|.|..=.+ .++++..+.|++...
T Consensus 32 ~~~~~l~L~N~s~~~VaFKVKTT~p-~~--y~VrP~~GiI-~P~~s~~v~V~l~~~ 83 (147)
T 2cri_A 32 VVTTNLKLQNPSDRKVCFKVKTTAP-RR--YCVRPNSGII-DPGSIVTVSVMLQPF 83 (147)
T ss_dssp CCCEEEEEECCSSSCEEEEEEESCT-TS--EEEESSEEEC-CTTCEEEEEEEECCC
T ss_pred eEEEEEEEECCCCCcEEEEEECCCC-cc--EEEcCCCcEE-CCCCeEEEEEEECCC
Confidence 3455688999999999999999999 44 5668987766 799999999998764
No 68
>2kq1_A BH0266 protein; solution NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; NMR {Bacillus halodurans}
Probab=33.27 E-value=9.8 Score=33.41 Aligned_cols=51 Identities=25% Similarity=0.240 Sum_probs=31.2
Q ss_pred EEEEEecCCCCeEEEEEEE-cCCCCeEEEEecCeeEec-cCceEEEEEEEEEec
Q 004278 676 IRTVTNVGQPNAVYTVKVV-SPEKGVTVTVKPSRLVFT-EGVKKSSFVVTVTAD 727 (764)
Q Consensus 676 ~rtvtNvg~~~~ty~~~~~-~p~~g~~v~v~p~~l~~~-~~~~~~~~~vt~~~~ 727 (764)
..-++|.+.+..+..+.+. .| .|++++++|+.++++ ..-.+++|.|++...
T Consensus 58 ~vDLs~l~~G~~~vpv~v~~lp-~~v~v~v~P~~V~V~i~~~~~k~~pV~v~~~ 110 (119)
T 2kq1_A 58 FVDLTEAGEGSHTVDVEHRGFP-GDLAVTVEPRMARVQLEERQTVSVPVTVEMI 110 (119)
T ss_dssp EEECTTCCBEEEEEECEEESSC-TTSEEEESCCEEEEEEESCCCCCCCCCCCCC
T ss_pred EEECccCCCCeEEEEEEEecCC-CCeEEEEcCCEEEEEEEEEEEEEEEEEEEEC
Confidence 3344565543334445555 57 899999999988764 344556666665544
No 69
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=32.07 E-value=2e+02 Score=25.04 Aligned_cols=53 Identities=11% Similarity=0.060 Sum_probs=36.0
Q ss_pred eeEEEEEEEEecCCCCeE--------EEEEEEcCCCCeEEE---------EecCeeEeccCceEEEEEEEEE
Q 004278 671 SSKSFIRTVTNVGQPNAV--------YTVKVVSPEKGVTVT---------VKPSRLVFTEGVKKSSFVVTVT 725 (764)
Q Consensus 671 ~~~~~~rtvtNvg~~~~t--------y~~~~~~p~~g~~v~---------v~p~~l~~~~~~~~~~~~vt~~ 725 (764)
....++.+|+|.++.+.+ |.+.+... .|-.|- -.....++ ++||+++|+.++.
T Consensus 18 ~~v~~~ltv~N~s~~~v~l~f~Sgq~~Df~v~d~-~G~~VwrwS~~~~FtQa~~~~tl-~pGE~~~f~~~w~ 87 (120)
T 3isy_A 18 EQIKFNMSLKNQSERAIEFQFSTGQKFELVVYDS-EHKERYRYSKEKMFTQAFQNLTL-ESGETYDFSDVWK 87 (120)
T ss_dssp SCEEEEEEEEECSSSCEEEEESSSCCEEEEEECT-TCCEEEETTTTCCCCCCCEEEEE-CTTCEEEEEEEES
T ss_pred CeEEEEEEEEcCCCCcEEEEeCCCCEEEEEEECC-CCCEEEEccccchhhhhhceEEE-CCCCEEEEEEEeC
Confidence 578899999999986543 45556555 554333 11223456 7999999999988
No 70
>3sd2_A Putative member of DUF3244 protein family; immunoglobulin-like beta-sandwich, structural genomics, JOIN for structural genomics; HET: MSE; 1.40A {Bacteroides thetaiotaomicron}
Probab=31.42 E-value=2.2e+02 Score=24.03 Aligned_cols=65 Identities=15% Similarity=0.188 Sum_probs=44.0
Q ss_pred ceeeeeccCcCcceeEEEEEEEEecCCCCeEEEEEEEcCCCCeEEEEecCeeEeccCceEEEEEEEEEecccccccCCCc
Q 004278 658 SIAALFSTQSRGVSSKSFIRTVTNVGQPNAVYTVKVVSPEKGVTVTVKPSRLVFTEGVKKSSFVVTVTADSKNLVLNDSG 737 (764)
Q Consensus 658 s~~~~~~~~~~~~~~~~~~rtvtNvg~~~~ty~~~~~~p~~g~~v~v~p~~l~~~~~~~~~~~~vt~~~~~~~~~~~~~~ 737 (764)
.++|.|.+ ....++.||+|-..+...|.-.+..| . .+++ .+ ...++-+|+|.+.... .+
T Consensus 35 vlsV~F~~-----~~~~vTItItNe~TG~~VYs~~~s~p-~--~i~I-----dL-nge~sG~Y~IeI~~~~-------~~ 93 (101)
T 3sd2_A 35 ILNVSFGR-----AKDYAIITVTNKATGEIVHSKTYHNT-S--IVMI-----DM-SSCEKGEYTIHIILND-------CL 93 (101)
T ss_dssp EEEEEESS-----CCSCEEEEEEETTTCCEEEEEEESSC-S--EEEE-----EC-TTSCSEEEEEEEEETT-------EE
T ss_pred EEEEEecc-----CCCcEEEEEEECCCCcEEEEEeccCC-c--EEEE-----Ec-CCCcCceEEEEEEeCC-------cE
Confidence 67777765 34568899999977788998888777 3 3332 23 2345778999988654 33
Q ss_pred cEEEEEE
Q 004278 738 AAFGSIS 744 (764)
Q Consensus 738 ~~~G~~~ 744 (764)
..|..+
T Consensus 94 -LtG~F~ 99 (101)
T 3sd2_A 94 -LEGTFT 99 (101)
T ss_dssp -EEEEEE
T ss_pred -EEEEEE
Confidence 567654
No 71
>1wgl_A TOLL-interacting protein; CUE domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, immune system; NMR {Homo sapiens} SCOP: a.5.2.4
Probab=30.26 E-value=33 Score=26.06 Aligned_cols=37 Identities=14% Similarity=0.121 Sum_probs=27.8
Q ss_pred cchhhhHHHHHHHHhhhCCCCCHHHHHHHHHhccccc
Q 004278 539 SMACPHVSGAAALLKSAHPDWSPAAIRSAMMTTASIV 575 (764)
Q Consensus 539 SmAaP~VAGvaALl~~~~P~~sp~~ik~~L~~TA~~~ 575 (764)
|-..|..--.+..|++.+|+++...|+..|...-..+
T Consensus 3 ~~~~~~~ee~l~~L~emFP~ld~~~I~~vL~a~~gdv 39 (59)
T 1wgl_A 3 SGSSGCSEEDLKAIQDMFPNMDQEVIRSVLEAQRGNK 39 (59)
T ss_dssp SCSSSSCHHHHHHHHHHCSSSCHHHHHHHHTTTTTCH
T ss_pred CCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHcCCCH
Confidence 3333444556778999999999999999998765544
No 72
>2l0d_A Cell surface protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Methanosarcina acetivorans}
Probab=24.82 E-value=2.5e+02 Score=24.19 Aligned_cols=24 Identities=17% Similarity=0.448 Sum_probs=17.2
Q ss_pred eeEEEEEEEEecCCCC-eEEEEEEE
Q 004278 671 SSKSFIRTVTNVGQPN-AVYTVKVV 694 (764)
Q Consensus 671 ~~~~~~rtvtNvg~~~-~ty~~~~~ 694 (764)
...+++.+|+|.|... ..+.+.+.
T Consensus 19 ~~~ti~atVkN~G~~~a~~~~V~ly 43 (114)
T 2l0d_A 19 TVNTMTATIENQGNKDSTSFNVSLL 43 (114)
T ss_dssp SEEEEEEEEEECSSSCBCCEEEEEE
T ss_pred CeEEEEEEEEECCCCCCCCEEEEEE
Confidence 5789999999999743 34555543
No 73
>1yew_A Particulate methane monooxygenase, B subunit; membrane protein, beta barrel, oxidoreductase; 2.80A {Methylococcus capsulatus} PDB: 3rgb_A
Probab=23.39 E-value=71 Score=33.38 Aligned_cols=52 Identities=21% Similarity=0.300 Sum_probs=33.5
Q ss_pred eeEEEEEEEEecCCCCeE---EE-EEE--Ec----------C-----CCCeEEEEecCeeEeccCceEEEEEEEEEe
Q 004278 671 SSKSFIRTVTNVGQPNAV---YT-VKV--VS----------P-----EKGVTVTVKPSRLVFTEGVKKSSFVVTVTA 726 (764)
Q Consensus 671 ~~~~~~rtvtNvg~~~~t---y~-~~~--~~----------p-----~~g~~v~v~p~~l~~~~~~~~~~~~vt~~~ 726 (764)
.+.+++.+|||.|+.+.. |+ +.+ .. | ..| ++|+|+.- + .+||+++++|+++-
T Consensus 264 R~l~~~~~VtN~g~~pvrlgeF~tA~vrFln~~~~~~~~~~P~~lla~~g--L~vsd~~p-I-~PGETr~~~v~a~d 336 (382)
T 1yew_A 264 RAMRMKLTITNHGNSPIRLGEFYTASVRFLDSDVYKDTTGYPEDLLAEDG--LSVSDNSP-L-APGETRTVDVTASD 336 (382)
T ss_dssp SEEEEEEEEEECSSSCEEEEEEECSSCEEECTTTCCCCSCCCGGGEETTC--EEESCCSC-B-CTTCEEEEEEEEEC
T ss_pred cEEEEEEEEEcCCCCceEeeeEEeccEEEeCCcccccCCCChHHhhccCC--ceeCCCCC-c-CCCceeEEEEEeeh
Confidence 578899999999987643 22 221 11 1 013 35566652 2 68999999999874
No 74
>3q48_A Chaperone CUPB2; IG fold, periplasmic chaperone; 2.50A {Pseudomonas aeruginosa}
Probab=21.30 E-value=3e+02 Score=27.29 Aligned_cols=54 Identities=11% Similarity=0.090 Sum_probs=36.6
Q ss_pred eEEEEEEEEecCCCCeEEEEEEEcCC-----C--CeEEEEecCeeEeccCceEEEEEEEEEe
Q 004278 672 SKSFIRTVTNVGQPNAVYTVKVVSPE-----K--GVTVTVKPSRLVFTEGVKKSSFVVTVTA 726 (764)
Q Consensus 672 ~~~~~rtvtNvg~~~~ty~~~~~~p~-----~--g~~v~v~p~~l~~~~~~~~~~~~vt~~~ 726 (764)
.+..+.+|+|.++.+.--.+-++.-. . ..-+.|+|..+.+ ++|+++.+.|....
T Consensus 43 ~k~~sl~l~N~~~~P~LvQsWid~~~~~~~p~~~~~pfivtPPl~rl-~pg~~q~lRI~~~~ 103 (257)
T 3q48_A 43 EREVTLRVSNTSGTPVLAQAWIDDGRQDVPPEELQVPFSVTPAVTRV-EPNGGAVLRIAYLK 103 (257)
T ss_dssp CSEEEEEEEECSSSCEEEEEEEESSCCSSCGGGGCCSEEEESSEEEE-CTTEEEEEEEEECC
T ss_pred CcEEEEEEEeCCCCeEEEEEEEEcCCCccCcccccCCEEEcCCEEEE-CCCCceEEEEEECC
Confidence 45577899999876433233344220 1 2348899999999 79999999987654
No 75
>1ni7_A ER75, hypothetical protein YGDK; RD-structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Escherichia coli} SCOP: d.224.1.1
Probab=21.28 E-value=60 Score=29.87 Aligned_cols=31 Identities=26% Similarity=0.260 Sum_probs=26.2
Q ss_pred eccccchhhhHHHHHHHHhhhCCCCCHHHHHH
Q 004278 535 LSGTSMACPHVSGAAALLKSAHPDWSPAAIRS 566 (764)
Q Consensus 535 ~sGTSmAaP~VAGvaALl~~~~P~~sp~~ik~ 566 (764)
+.|-| =|+.|-|++|||.+.+-..||+||.+
T Consensus 79 F~adS-DA~IvkGL~AlL~~~~~G~tp~eIl~ 109 (155)
T 1ni7_A 79 FFGDS-EGRIVRGLLAVLLTAVEGKTAAELQA 109 (155)
T ss_dssp CEEEE-SSHHHHHHHHHHHHHTTTCCHHHHHH
T ss_pred EeeCC-ccHHHHHHHHHHHHHHcCCCHHHHHh
Confidence 33445 47999999999999999999999975
Done!