Citrus Sinensis ID: 004280

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760----

MSTYAKPEAALNQAEALINVGQKQDALQVLHDLITSKRHRAWQKILEKIMFKYVELCVDMRRGKFAKDGLIQYRIVCQQVNVTSLEEVIKHFMHLSTEKAEQARSQAQALEEALDVDDLEADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAHRAFQFCKQYKRTTEFRRLCEIIRNHLLNLNKYRDQRDRPDLSSPESLQLYLDTRFEQLKVATDLQLWQEAFYSVEDIHGLMCMVKKTPKPSLLVVYYAKLTEIFWISSSHLYHAYAWFKLFTLQKTYNKNLSLKDLQLIASSVVLAALLVVPYDRSRSASHLELENEKDRNLRMANLIGFELDPKFDSREALSRSSLLSELVSKGVMSCATQEVKDLYNLLEHEFLPLDLASKVQPLLAKISKYGGKLASASSVPEVQLSRYIPALEKLVTLRVLQQVSEVYQMMRIESLSQMIPFFDFAVVEKISVEAVKHNFIAMKIDHMRGVVVFCNLGLESDGLRDHLTIFAQSLNKVRALIYPPANKASKLGEMLAGLGEIVDKEHKRLLARKSIIEKRKEEHERQLIEMEREEESRRLKQQKITEEAEQKRLAAEFEHRKNQRILREIEERELEEAQALLEEAEKRNKKKGGKKPILEGEKVLHEREQQLEVELSRQRHDGDLREKYRLSRMLDNKNTFQERVLNRRRVEVDRRKVEREERISLIIKARKQEREAKRKKIFYVRTEEEKIKRLREEEEARKREGIHIN

ccccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHcccccccccccHHccHHHHHHHHHHccccccccHHHHHHHHHHHHccccHHHHHcHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHEEEHHHHHcccccccHHHHHHHHHHHHHHccccEEEEccccEEEEcccccccHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccc

***YAKPEAALNQAEALINVGQKQDALQVLHDLITSKRHRAWQKILEKIMFKYVELCVDMRRGKFAKDGLIQYRIVCQQVNVTSLEEVIKHFMHLSTEKA******************LEADKRPEDLMLSYVSG*****RSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAHRAFQFCKQYKRTTEFRRLCEIIRNHLLNLNKY********LSSPESLQLYLDTRFEQLKVATDLQLWQEAFYSVEDIHGLMCMVKKTPKPSLLVVYYAKLTEIFWISSSHLYHAYAWFKLFTLQKTYNKNLSLKDLQLIASSVVLAALLVVPYD*******************MANLIGFEL*************SLLSELVSKGVMSCATQEVKDLYNLLEHEFLPLDLASKVQPLLAKISKYGG*******VPEVQLSRYIPALEKLVTLRVLQQVSEVYQMMRIESLSQMIPFFDFAVVEKISVEAVKHNFIAMKIDHMRGVVVFCNLGLESDGLRDHLTIFAQSLNKVRALIYPPANKASKLGEMLAGLGEIVDKE***L************************************************************************************************************************************************************I**************IFY**************************

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MSTYAKPEAALNQAEALINVGQKQDALQVLHDLITSKRHRAWQKILEKIMFKYVELCVDMRRGKFAKDGLIQYRIVCQQVNVTSLEEVIKHFxxxxxxxxxxxxxxxxxxxxxxxxxxxxADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAHRAFQFCKQYKRTTEFRRLCEIIRNHLLNLNKYRDQRDRPDLSSPESLQLYLDTRFEQLKVATDLQLWQEAFYSVEDIHGLMCMVKKTPKPSLLVVYYAKLTEIFWISSSHLYHAYAWFKLFTLQKTYNKNLSLKDLQLIASSVVLAALLVVPYDRSRSASHLELENEKDRNLRMANLIGFELDPKFDSREALSRSSLLSELVSKGVMSCATQEVKDLYNLLEHEFLPLDLASKVQPLLAKISKYGGKLASASSVPEVQLSRYIPALEKLVTLRVLQQVSEVYQMMRIESLSQMIPFFDFAVVEKISVEAVKHNFIAMKIDHMRGVVVFCNLGLESDGLRDHLTIFAQSLNKVRALIYPPANKASKLGEMLAGLGEIVDKExxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxKRLAAEFEHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxKPILEGEKVLHEREQQLEVELSRQRHDGDLREKYRLSRMLDNKNTFQERVLNRRRVEVDRRKVEREERISLIIKARKQEREAKRKKIFYxxxxxxxxxxxxxxxxxxxxxGIHIN

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
Eukaryotic translation initiation factor 3 subunit A	Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome.	probable	Q9LD55
Eukaryotic translation initiation factor 3 subunit A	Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome.	probable	Q40554

Prediction of Enzyme Commission Number

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 4B4T, chain P
Confidence level:confident
Coverage over the Query: 18-103,123-126,155-336,351-408,431-508
View the alignment between query and template
View the model in PyMOL

Template: 4B4T, chain Q
Confidence level:confident
Coverage over the Query: 6-94,132-334,349-402,416-422,435-509
View the alignment between query and template
View the model in PyMOL

Template: 2DFS, chain A
Confidence level:probable
Coverage over the Query: 539-621,650-759
View the alignment between query and template
View the model in PyMOL