Query 004286
Match_columns 763
No_of_seqs 558 out of 4038
Neff 9.5
Searched_HMMs 29240
Date Mon Mar 25 20:19:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004286.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004286hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1n11_A Ankyrin; clathrin, BAND 100.0 3E-54 1E-58 478.8 29.1 381 3-589 3-388 (437)
2 1n11_A Ankyrin; clathrin, BAND 100.0 1.3E-50 4.5E-55 449.5 28.1 342 10-539 47-389 (437)
3 4g8k_A 2-5A-dependent ribonucl 100.0 1.7E-43 5.8E-48 378.2 31.0 204 10-226 25-234 (337)
4 1wdy_A 2-5A-dependent ribonucl 100.0 6.3E-42 2.1E-46 356.1 31.5 199 9-225 4-213 (285)
5 3utm_A Tankyrase-1; tankyrase, 100.0 4.5E-41 1.5E-45 361.0 31.7 279 9-536 23-322 (351)
6 2xai_A ASB-9, ankyrin repeat a 100.0 5.3E-41 1.8E-45 345.0 24.4 245 44-539 2-250 (261)
7 1wdy_A 2-5A-dependent ribonucl 100.0 2.4E-40 8.3E-45 344.1 26.5 165 43-228 3-179 (285)
8 2fo1_E LIN-12 protein; beta-ba 100.0 1.1E-41 3.8E-46 368.8 16.9 289 11-541 38-360 (373)
9 3utm_A Tankyrase-1; tankyrase, 100.0 4E-41 1.4E-45 361.4 18.9 314 35-595 14-330 (351)
10 3d9h_A CDNA FLJ77766, highly s 100.0 3.1E-40 1.1E-44 343.7 24.9 195 9-225 14-217 (285)
11 3d9h_A CDNA FLJ77766, highly s 100.0 8.3E-40 2.8E-44 340.5 24.2 249 42-537 12-265 (285)
12 3ljn_A Hypothetical protein; a 100.0 1.6E-40 5.6E-45 359.0 18.0 268 33-539 8-301 (364)
13 1oy3_D Transcription factor in 100.0 1.3E-39 4.5E-44 338.4 21.7 261 38-539 2-270 (282)
14 1yyh_A HN1;, notch 1, ankyrin 100.0 2.3E-39 8E-44 331.1 22.2 169 37-226 2-185 (253)
15 4g8k_A 2-5A-dependent ribonucl 100.0 1.6E-38 5.4E-43 339.6 26.2 283 42-542 22-316 (337)
16 1yyh_A HN1;, notch 1, ankyrin 100.0 1.2E-38 4.2E-43 325.7 20.1 224 76-542 2-238 (253)
17 2xai_A ASB-9, ankyrin repeat a 100.0 2.3E-38 7.8E-43 325.3 21.9 192 10-226 3-194 (261)
18 1k1a_A B-cell lymphoma 3-encod 100.0 2.4E-38 8.3E-43 320.8 21.5 175 39-226 3-178 (241)
19 2fo1_E LIN-12 protein; beta-ba 100.0 6.6E-39 2.2E-43 347.1 18.0 196 10-225 94-307 (373)
20 3b7b_A Euchromatic histone-lys 100.0 8.8E-38 3E-42 316.0 25.1 136 76-225 3-138 (237)
21 3ljn_A Hypothetical protein; a 100.0 2.4E-38 8.4E-43 341.9 22.2 193 9-226 19-239 (364)
22 3b7b_A Euchromatic histone-lys 100.0 1.5E-37 5E-42 314.3 24.6 170 36-226 2-172 (237)
23 1s70_B 130 kDa myosin-binding 100.0 5.9E-38 2E-42 329.1 19.6 81 452-537 195-275 (299)
24 4b93_B Ankyrin repeat domain-c 100.0 4.1E-38 1.4E-42 324.0 16.1 172 40-226 6-180 (269)
25 3aji_A 26S proteasome non-ATPa 100.0 6.4E-37 2.2E-41 308.3 23.9 165 42-226 3-167 (231)
26 1k1a_A B-cell lymphoma 3-encod 100.0 3E-37 1E-41 312.8 21.2 222 77-542 2-231 (241)
27 2dzn_A Probable 26S proteasome 100.0 3.8E-36 1.3E-40 301.9 23.6 161 45-225 2-168 (228)
28 2dzn_A Probable 26S proteasome 100.0 3.2E-36 1.1E-40 302.4 22.6 214 84-538 2-219 (228)
29 3eu9_A Huntingtin-interacting 100.0 4.3E-36 1.5E-40 303.7 23.3 169 38-225 2-170 (240)
30 4b93_B Ankyrin repeat domain-c 100.0 8.8E-37 3E-41 314.0 16.9 217 79-539 6-230 (269)
31 1sw6_A Regulatory protein SWI6 100.0 2.6E-37 9E-42 328.1 12.6 181 20-221 29-228 (327)
32 3aji_A 26S proteasome non-ATPa 100.0 8.1E-36 2.8E-40 300.2 22.6 195 10-226 6-200 (231)
33 3kea_A K1L; tropism, ANK repea 100.0 2.4E-36 8.3E-41 314.2 17.9 182 18-226 7-189 (285)
34 2f8y_A Notch homolog 1, transl 100.0 9E-35 3.1E-39 290.9 19.9 148 42-202 22-169 (223)
35 3kea_A K1L; tropism, ANK repea 100.0 8.1E-35 2.8E-39 302.7 19.0 131 76-223 23-154 (285)
36 2f8y_A Notch homolog 1, transl 100.0 3.2E-34 1.1E-38 286.8 20.9 194 10-225 25-218 (223)
37 1oy3_D Transcription factor in 100.0 5.5E-34 1.9E-38 296.0 20.9 209 9-253 8-266 (282)
38 3eu9_A Huntingtin-interacting 100.0 3.7E-33 1.2E-37 282.1 24.3 194 10-226 9-205 (240)
39 1s70_B 130 kDa myosin-binding 100.0 7.9E-34 2.7E-38 297.6 18.8 154 51-219 4-160 (299)
40 1ikn_D Protein (I-kappa-B-alph 100.0 1.7E-34 5.8E-39 291.7 11.9 82 455-539 150-231 (236)
41 1ikn_D Protein (I-kappa-B-alph 100.0 1.5E-34 5.1E-39 292.1 9.2 176 39-226 2-179 (236)
42 2rfa_A Transient receptor pote 100.0 1E-32 3.4E-37 277.8 22.2 167 44-225 2-185 (232)
43 4gpm_A Engineered protein OR26 100.0 6.8E-33 2.3E-37 263.2 19.2 159 47-226 6-164 (169)
44 2rfa_A Transient receptor pote 100.0 1.4E-32 4.8E-37 276.8 20.3 201 11-228 4-227 (232)
45 3hra_A Ankyrin repeat family p 100.0 2.8E-32 9.7E-37 267.9 21.4 191 10-221 5-201 (201)
46 4gpm_A Engineered protein OR26 100.0 2.1E-32 7.3E-37 259.7 19.5 163 8-186 2-164 (169)
47 3hra_A Ankyrin repeat family p 100.0 9.3E-32 3.2E-36 264.3 23.6 147 44-202 4-151 (201)
48 2pnn_A Transient receptor pote 100.0 3.5E-33 1.2E-37 288.7 13.9 161 35-203 3-196 (273)
49 1sw6_A Regulatory protein SWI6 100.0 5.4E-33 1.8E-37 294.9 10.5 147 21-183 58-230 (327)
50 2etb_A Transient receptor pote 100.0 1.4E-31 4.8E-36 273.8 19.0 198 11-225 3-248 (256)
51 2etb_A Transient receptor pote 100.0 1.6E-31 5.4E-36 273.5 16.4 134 83-226 1-167 (256)
52 2pnn_A Transient receptor pote 100.0 2.2E-31 7.4E-36 275.2 17.6 204 10-228 13-264 (273)
53 3jxi_A Vanilloid receptor-rela 100.0 2.3E-31 8E-36 272.8 16.0 199 11-226 6-253 (260)
54 2rfm_A Putative ankyrin repeat 100.0 8.6E-30 2.9E-34 248.4 17.9 164 37-221 27-190 (192)
55 3jxi_A Vanilloid receptor-rela 100.0 1.6E-30 5.5E-35 266.6 13.4 136 81-226 2-171 (260)
56 4hbd_A KN motif and ankyrin re 100.0 1.3E-30 4.4E-35 269.5 11.8 192 11-221 77-273 (276)
57 3v30_A DNA-binding protein rfx 100.0 4.7E-29 1.6E-33 238.4 17.8 169 11-194 3-171 (172)
58 3v31_A Ankyrin repeat family A 100.0 3.5E-29 1.2E-33 238.1 16.4 161 44-225 2-162 (167)
59 4hbd_A KN motif and ankyrin re 100.0 2E-29 7E-34 260.5 15.3 166 43-226 74-245 (276)
60 1ihb_A P18-INK4C(INK6), cyclin 100.0 3.4E-29 1.2E-33 236.8 15.3 158 44-223 4-162 (162)
61 2y1l_E Darpin-8.4; hydrolase-i 100.0 1.3E-28 4.5E-33 234.6 18.2 160 41-221 10-169 (169)
62 2aja_A Ankyrin repeat family p 100.0 1.2E-30 4.1E-35 279.5 3.2 157 43-226 90-253 (376)
63 3v30_A DNA-binding protein rfx 100.0 8E-29 2.7E-33 236.8 14.9 164 45-228 2-165 (172)
64 3f6q_A Integrin-linked protein 100.0 1.2E-28 4E-33 237.4 15.8 168 43-230 3-170 (179)
65 1ihb_A P18-INK4C(INK6), cyclin 100.0 3.2E-28 1.1E-32 230.0 17.2 159 8-183 3-162 (162)
66 3twr_A Tankyrase-2; ankyrin re 100.0 2.1E-28 7.1E-33 232.2 13.8 161 41-222 4-164 (165)
67 1awc_B Protein (GA binding pro 100.0 8.9E-28 3E-32 224.8 17.9 151 45-217 2-152 (153)
68 2vge_A RELA-associated inhibit 100.0 8.5E-30 2.9E-34 255.3 4.1 133 80-227 17-152 (229)
69 2y1l_E Darpin-8.4; hydrolase-i 100.0 2.2E-27 7.6E-32 226.1 19.4 154 10-178 14-167 (169)
70 2aja_A Ankyrin repeat family p 99.9 7.2E-30 2.5E-34 273.4 0.6 168 11-203 93-266 (376)
71 1awc_B Protein (GA binding pro 99.9 2.7E-27 9.1E-32 221.5 17.8 151 10-176 2-152 (153)
72 1bd8_A P19INK4D CDK4/6 inhibit 99.9 1.4E-27 4.7E-32 224.2 15.7 154 45-220 2-155 (156)
73 3v31_A Ankyrin repeat family A 99.9 2.1E-27 7.3E-32 225.7 17.2 157 11-183 4-160 (167)
74 2vge_A RELA-associated inhibit 99.9 2.6E-29 8.8E-34 251.8 3.8 112 100-226 1-115 (229)
75 3f6q_A Integrin-linked protein 99.9 1.1E-27 3.7E-32 230.6 14.7 168 9-191 4-171 (179)
76 1bd8_A P19INK4D CDK4/6 inhibit 99.9 5.3E-27 1.8E-31 220.2 17.5 154 10-179 2-155 (156)
77 2rfm_A Putative ankyrin repeat 99.9 3.3E-27 1.1E-31 230.0 16.4 155 10-179 35-189 (192)
78 3twr_A Tankyrase-2; ankyrin re 99.9 5.2E-27 1.8E-31 222.5 15.5 159 8-182 6-164 (165)
79 1ycs_B 53BP2, P53BP2; ankyrin 99.9 3.6E-27 1.2E-31 238.2 11.9 166 42-229 2-170 (239)
80 1ycs_B 53BP2, P53BP2; ankyrin 99.9 5.1E-27 1.7E-31 237.1 8.7 177 10-203 5-193 (239)
81 1d9s_A Cyclin-dependent kinase 99.9 3.3E-26 1.1E-30 209.4 12.3 134 35-183 2-136 (136)
82 1bi7_B P16INK4A, MTS1, multipl 99.9 2.5E-26 8.4E-31 215.7 10.1 146 39-199 6-152 (156)
83 3t8k_A Uncharacterized protein 99.9 9.3E-27 3.2E-31 224.7 5.9 142 46-202 7-165 (186)
84 3t8k_A Uncharacterized protein 99.9 1.9E-26 6.3E-31 222.6 7.0 162 10-189 6-185 (186)
85 1d9s_A Cyclin-dependent kinase 99.9 9.4E-26 3.2E-30 206.4 11.3 133 75-223 3-136 (136)
86 2jab_A H10-2-G3; HER2, darpin, 99.9 3.4E-24 1.1E-28 196.0 13.7 126 41-179 10-135 (136)
87 1n0r_A 4ANK, 4 ankyrin repeats 99.9 1.1E-23 3.8E-28 189.3 16.1 126 44-183 1-126 (126)
88 1n0r_A 4ANK, 4 ankyrin repeats 99.9 2.8E-23 9.6E-28 186.7 15.9 126 83-223 1-126 (126)
89 2jab_A H10-2-G3; HER2, darpin, 99.9 1.7E-23 5.9E-28 191.2 14.3 127 80-221 10-136 (136)
90 1bi7_B P16INK4A, MTS1, multipl 99.9 3.2E-24 1.1E-28 201.2 8.9 142 7-163 9-151 (156)
91 3c5r_A BARD-1, BRCA1-associate 99.9 3.1E-24 1.1E-28 196.5 7.4 131 35-179 1-131 (137)
92 3c5r_A BARD-1, BRCA1-associate 99.9 1.6E-23 5.4E-28 191.8 9.4 131 75-221 2-132 (137)
93 3deo_A Signal recognition part 99.9 2.6E-23 8.9E-28 200.6 10.6 141 42-221 41-182 (183)
94 3ui2_A Signal recognition part 99.9 1.8E-23 6.1E-28 211.7 9.3 145 42-225 42-187 (244)
95 2b0o_E UPLC1; arfgap, structur 99.9 2.1E-22 7.1E-27 210.0 16.3 139 45-203 151-298 (301)
96 3aaa_C Myotrophin, protein V-1 99.9 6E-23 2E-27 184.1 10.0 112 42-165 4-115 (123)
97 3ehr_A Osteoclast-stimulating 99.9 2.3E-23 7.9E-28 207.8 7.5 139 40-192 68-207 (222)
98 3deo_A Signal recognition part 99.9 1.3E-22 4.5E-27 195.6 10.8 113 81-202 41-154 (183)
99 3ui2_A Signal recognition part 99.9 2.4E-22 8.3E-27 203.3 13.0 141 43-201 13-154 (244)
100 3aaa_C Myotrophin, protein V-1 99.9 6.5E-22 2.2E-26 177.2 13.2 112 81-200 4-115 (123)
101 2b0o_E UPLC1; arfgap, structur 99.9 4.1E-22 1.4E-26 207.8 11.7 139 11-169 152-299 (301)
102 3ehr_A Osteoclast-stimulating 99.9 2.2E-22 7.5E-27 200.6 8.7 138 78-230 67-205 (222)
103 3jue_A Arfgap with coiled-coil 99.8 3.1E-21 1.1E-25 205.7 13.4 166 42-225 196-366 (368)
104 1dcq_A PYK2-associated protein 99.8 6E-21 2.1E-25 196.6 13.2 141 46-202 131-274 (278)
105 3lvq_E ARF-GAP with SH3 domain 99.8 1.1E-20 3.8E-25 211.7 14.5 143 45-201 132-277 (497)
106 1n0q_A 3ANK, 3 ankyrin repeats 99.8 1.5E-20 5E-25 159.2 11.5 91 45-142 2-92 (93)
107 3lvq_E ARF-GAP with SH3 domain 99.8 4.4E-20 1.5E-24 206.8 14.6 136 11-166 133-277 (497)
108 1n0q_A 3ANK, 3 ankyrin repeats 99.8 7.8E-20 2.7E-24 154.7 12.0 93 83-183 1-93 (93)
109 1dcq_A PYK2-associated protein 99.8 1.2E-19 4.2E-24 186.8 15.9 128 9-145 129-265 (278)
110 2l6b_A NR1C; ankyrin, consensu 99.8 4.2E-20 1.4E-24 163.2 7.9 108 79-194 4-111 (115)
111 2l6b_A NR1C; ankyrin, consensu 99.8 2.6E-20 8.9E-25 164.6 6.3 109 40-160 4-112 (115)
112 3jue_A Arfgap with coiled-coil 99.8 2.4E-19 8.1E-24 191.1 13.9 147 11-168 200-349 (368)
113 2zgd_A 3 repeat synthetic anky 99.7 2.8E-17 9.5E-22 143.7 10.9 93 77-176 17-109 (110)
114 2zgd_A 3 repeat synthetic anky 99.7 2.4E-17 8.1E-22 144.1 9.8 95 36-137 15-109 (110)
115 1gp8_A Protein (scaffolding pr 37.4 31 0.0011 22.2 2.9 23 7-29 10-32 (40)
116 4aw6_A CAAX prenyl protease 1 26.9 2.4E+02 0.0081 30.1 9.7 28 729-756 205-232 (482)
117 2l8s_A Integrin alpha-1; trans 23.5 2E+02 0.0067 20.3 5.5 13 747-759 32-44 (54)
118 4ev6_A Magnesium transport pro 23.1 79 0.0027 32.1 5.0 22 691-712 281-302 (339)
119 3mkq_B Coatomer subunit alpha; 23.0 3.6E+02 0.012 24.2 8.8 135 10-183 8-144 (177)
120 4hkr_A Calcium release-activat 21.2 4.8E+02 0.016 23.9 15.4 29 642-670 58-86 (214)
121 1vry_A Glycine receptor alpha- 21.0 1.7E+02 0.0058 22.3 5.1 37 707-743 21-57 (76)
122 3rhw_A Avermectin-sensitive gl 21.0 3.6E+02 0.012 27.1 9.6 42 702-743 257-298 (347)
No 1
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=3e-54 Score=478.82 Aligned_cols=381 Identities=19% Similarity=0.186 Sum_probs=314.3
Q ss_pred CCCChh----hhhHHHHHHHHcCCHHHHHHHHccCCCccccccCCCCChHHHHHHHcCCHHHHHHHHHHhhhhccccccc
Q 004286 3 TGIDID----QLKKGLFKSAMKGKWNEVVENYGKDDRIHEARITRSGGTALHIAVSDGQEEIVEDLVRIIHEKQQLKVLK 78 (763)
Q Consensus 3 ~~~d~~----~~~~~L~~aa~~g~~~~v~~lL~~~~~~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~ 78 (763)
+|++++ ...+|||.||..|+.+.|+.|+.. +++++..|..|.||||+||..|+.+++++|+++| ++++
T Consensus 3 ~g~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~--g~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g------~~~~ 74 (437)
T 1n11_A 3 PGISGGGGGESGLTPLHVASFMGHLPIVKNLLQR--GASPNVSNVKVETPLHMAARAGHTEVAKYLLQNK------AKVN 74 (437)
T ss_dssp ------------CCHHHHHHHHTCHHHHHHHHHT--TCCSCCSSSCCCCHHHHHHHHTCHHHHHHHHHHT------CCSS
T ss_pred CCCCccccCCCCCCHHHHHHHCCCHHHHHHHHHc--CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCC------CCCC
Confidence 456654 357899999999999999999988 8899999999999999999999999999999998 6789
Q ss_pred cCCCCCchHHHHHHHcCCHHHHHHHHhcCCCccCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCccccCCCCCh
Q 004286 79 IGDERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAARHGHKDAFLCLHYLCASVDDGYNYSRRKNGET 158 (763)
Q Consensus 79 ~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~d~~G~T 158 (763)
.+|..|+||||+|+..|+.+++++|+++|++ ++..+..|.||||+|+..|+.+++++|++++++.+ ..+..|.|
T Consensus 75 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~-----~~~~~g~t 148 (437)
T 1n11_A 75 AKAKDDQTPLHCAARIGHTNMVKLLLENNAN-PNLATTAGHTPLHIAAREGHVETVLALLEKEASQA-----CMTKKGFT 148 (437)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHHHHTCC-TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSC-----CCCTTSCC
T ss_pred CCCCCCCCHHHHHHHCCCHHHHHHHHhCCCC-CCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCc-----CCCCCCCC
Confidence 9999999999999999999999999999998 89999999999999999999999999999999988 88999999
Q ss_pred HHHHHHHcCChHHHHHHHHHhccccccccccCCCcHHHHHhcCCCCccCCchHHHHHHHHHcCCCCCccccccccccchh
Q 004286 159 ILHYAISGYYFVDLAFQIIHLYEKLVNFVNERGVSPLHLLATKPNAFRSGSHLGLCTGIIYHCISVDKLQEETSYDQHLF 238 (763)
Q Consensus 159 pLh~A~~~g~~~~iv~~LL~~~~~~~~~~d~~G~TpLh~A~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~ 238 (763)
|||+|+..|+. +++++|+++ +++++..+.+|.||||+|+..++ .+++++|+++|++++..+..
T Consensus 149 ~L~~A~~~g~~-~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~-------~~~v~~Ll~~g~~~~~~~~~-------- 211 (437)
T 1n11_A 149 PLHVAAKYGKV-RVAELLLER-DAHPNAAGKNGLTPLHVAVHHNN-------LDIVKLLLPRGGSPHSPAWN-------- 211 (437)
T ss_dssp HHHHHHHTTCH-HHHHHHHHT-TCCTTCCCSSCCCHHHHHHHTTC-------HHHHHHHGGGTCCSCCCCTT--------
T ss_pred HHHHHHHcCCH-HHHHHHHhC-CCCCCCCCCCCCCHHHHHHHcCC-------HHHHHHHHhCCCCCCCcCCC--------
Confidence 99999999999 999999994 99999999999999999999985 79999999999998876532
Q ss_pred hhccccCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCccCCCCCCCCCCCcccccccccCCccCCCCCC
Q 004286 239 TTIKKQTNYPENYETCLNFIRLLKTMVIVLFNRGNTKKEPTPRDAEDPERSKGNDGTGDQGEESRHNIGAQGHQFFPPNY 318 (763)
Q Consensus 239 ~~~~~~~~~p~~~~~~~~~~~~~~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~p~~~ 318 (763)
+.+|++++...+.
T Consensus 212 ------g~t~L~~A~~~~~------------------------------------------------------------- 224 (437)
T 1n11_A 212 ------GYTPLHIAAKQNQ------------------------------------------------------------- 224 (437)
T ss_dssp ------CCCHHHHHHHTTC-------------------------------------------------------------
T ss_pred ------CCCHHHHHHHcCC-------------------------------------------------------------
Confidence 4566666643211
Q ss_pred CchhhHHhhccchhhhhhccchhHHHHHHHHHhhhccHHHHHHHHHhccCCce-eccCCCCCCCCCCCCcccccCccccc
Q 004286 319 GTCFEFVKLVSKPMLVILGLGSTKIRKIRDEKQKHTWSVQILDELLRRTSLYE-YDYVGGKPLRRPSSQVEEDETIPYAI 397 (763)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~iv~~Ll~~~~~~~-~d~~G~tpL~~a~~~~~~~~~~~~~~ 397 (763)
.++++.|++.+.+.+ .|..|.||||+|+..++.
T Consensus 225 --------------------------------------~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~-------- 258 (437)
T 1n11_A 225 --------------------------------------VEVARSLLQYGGSANAESVQGVTPLHLAAQEGHA-------- 258 (437)
T ss_dssp --------------------------------------HHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCH--------
T ss_pred --------------------------------------HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHCCCH--------
Confidence 267888888877544 377788888888877443
Q ss_pred ccCCCCCCCCCCCCCCCCccccCccccccccccccCCCCCccccCCCCCCCCCCCCCCCCcHHHHHHHcChHHHHHHHHH
Q 004286 398 VDGGDTDADLEGDQQPDTSLTDHNVVTDTHKLSRNNGKNSEDRNEGGKTGSTIPDTVKRETPILIAAKNGITEIVEKILK 477 (763)
Q Consensus 398 ~~g~~~~~~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~G~tpLh~Aa~~g~~eiv~~LL~ 477 (763)
+++++|++++. +.+..|..|.||||+|++.|+.+++++|++
T Consensus 259 --------------~~v~~Ll~~~~-------------------------~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~ 299 (437)
T 1n11_A 259 --------------EMVALLLSKQA-------------------------NGNLGNKSGLTPLHLVAQEGHVPVADVLIK 299 (437)
T ss_dssp --------------HHHHHHHTTTC-------------------------CTTCCCTTCCCHHHHHHHHTCHHHHHHHHH
T ss_pred --------------HHHHHHHhcCC-------------------------CCCCCCCCCCCHHHHHHHcCCHHHHHHHHh
Confidence 34444444443 233467789999999999999999999998
Q ss_pred hCCccccccccCCCchhHHHHHcCChHHHHHHHhccchhhhhhccccCCCCchhhhHhhcCCCCCcCCchhhhhhhhhhH
Q 004286 478 SFPVAILDMNSEKKNVMLLAVENRQRHVYQLLLKTAIIQETVFRKVDDQGNSALHLAATLGDHKPWLIPGAALQMQWELK 557 (763)
Q Consensus 478 ~~~~~~~~~d~~G~T~LH~A~~~~~~~iv~~Ll~~~~~~~~~~n~~D~~G~TpLH~Aa~~g~~~~~~~~~~~~~~~~~l~ 557 (763)
. +.+++.+|..|+||||+|+.+|+.++|++|++.++ ++|.+|..|+||||+|++.|+.+++ +
T Consensus 300 ~-g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga----d~n~~~~~g~t~L~~A~~~g~~~iv-------------~ 361 (437)
T 1n11_A 300 H-GVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQA----DVNAKTKLGYSPLHQAAQQGHTDIV-------------T 361 (437)
T ss_dssp H-TCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTC----CTTCCCTTSCCHHHHHHHTTCHHHH-------------H
T ss_pred C-CccCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCC----CCCCCCCCCCCHHHHHHHCChHHHH-------------H
Confidence 5 66678888899999999999999999999999887 6888899999999999998873332 2
Q ss_pred HHHHHhhcCCccccccccCCCCChhhhhhhhh
Q 004286 558 WYEFVRDSMPFHFFVRYNDQNKSAKDVFTETH 589 (763)
Q Consensus 558 ~~~~~~~~~~~~~~~~~n~~g~tp~d~~~~~~ 589 (763)
| +++....+ +.+|.+|.||++++.+..
T Consensus 362 ~--Ll~~ga~~---~~~~~~g~t~l~~A~~~g 388 (437)
T 1n11_A 362 L--LLKNGASP---NEVSSDGTTPLAIAKRLG 388 (437)
T ss_dssp H--HHHTTCCS---CCCCSSSCCHHHHHHHTT
T ss_pred H--HHHCcCCC---CCCCCCCCCHHHHHHHcC
Confidence 2 22333333 478889999999887553
No 2
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=1.3e-50 Score=449.54 Aligned_cols=342 Identities=20% Similarity=0.198 Sum_probs=305.1
Q ss_pred hhHHHHHHHHcCCHHHHHHHHccCCCccccccCCCCChHHHHHHHcCCHHHHHHHHHHhhhhccccccccCCCCCchHHH
Q 004286 10 LKKGLFKSAMKGKWNEVVENYGKDDRIHEARITRSGGTALHIAVSDGQEEIVEDLVRIIHEKQQLKVLKIGDERGSTPLH 89 (763)
Q Consensus 10 ~~~~L~~aa~~g~~~~v~~lL~~~~~~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~d~~g~TpLh 89 (763)
..+|||.||..|+.+.++.|+.. +++++..|..|+||||+|+..|+.++|++|+++| ++++..|..|.||||
T Consensus 47 ~~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g------a~~~~~~~~g~t~L~ 118 (437)
T 1n11_A 47 VETPLHMAARAGHTEVAKYLLQN--KAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENN------ANPNLATTAGHTPLH 118 (437)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHH--TCCSSCCCTTSCCHHHHHHHHTCHHHHHHHHHHT------CCTTCCCTTCCCHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHhC--CCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhCC------CCCCCCCCCCCcHHH
Confidence 46899999999999999999988 8899999999999999999999999999999998 678999999999999
Q ss_pred HHHHcCCHHHHHHHHhcCCCccCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCccccCCCCChHHHHHHHcCCh
Q 004286 90 IAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAARHGHKDAFLCLHYLCASVDDGYNYSRRKNGETILHYAISGYYF 169 (763)
Q Consensus 90 ~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~d~~G~TpLh~A~~~g~~ 169 (763)
+|+..|+.++++.|++++++ .+..+..|.||||+|+..|+.+++++|+++|++++ ..+..|.||||+|+..|+.
T Consensus 119 ~A~~~g~~~~v~~Ll~~~~~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~-----~~~~~g~t~L~~A~~~~~~ 192 (437)
T 1n11_A 119 IAAREGHVETVLALLEKEAS-QACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPN-----AAGKNGLTPLHVAVHHNNL 192 (437)
T ss_dssp HHHHHTCHHHHHHHHHTTCC-SCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-----CCCSSCCCHHHHHHHTTCH
T ss_pred HHHHcCCHHHHHHHHhCCCC-CcCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCC-----CCCCCCCCHHHHHHHcCCH
Confidence 99999999999999999998 88899999999999999999999999999999998 8999999999999999999
Q ss_pred HHHHHHHHHhccccccccccCCCcHHHHHhcCCCCccCCchHHHHHHHHHcCCCCCccccccccccchhhhccccCCCCc
Q 004286 170 VDLAFQIIHLYEKLVNFVNERGVSPLHLLATKPNAFRSGSHLGLCTGIIYHCISVDKLQEETSYDQHLFTTIKKQTNYPE 249 (763)
Q Consensus 170 ~~iv~~LL~~~~~~~~~~d~~G~TpLh~A~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~p~ 249 (763)
+++++|+++ +++++..+.+|.||||+|+..++ .++++.|+++|++++..+.. +.+|+
T Consensus 193 -~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~-------~~~~~~Ll~~g~~~~~~~~~--------------g~t~L 249 (437)
T 1n11_A 193 -DIVKLLLPR-GGSPHSPAWNGYTPLHIAAKQNQ-------VEVARSLLQYGGSANAESVQ--------------GVTPL 249 (437)
T ss_dssp -HHHHHHGGG-TCCSCCCCTTCCCHHHHHHHTTC-------HHHHHHHHHTTCCTTCCCTT--------------CCCHH
T ss_pred -HHHHHHHhC-CCCCCCcCCCCCCHHHHHHHcCC-------HHHHHHHHHcCCCCCCCCCC--------------CCCHH
Confidence 999999995 88999999999999999999985 79999999999999876633 55677
Q ss_pred cHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCccCCCCCCCCCCCcccccccccCCccCCCCCCCchhhHHhhcc
Q 004286 250 NYETCLNFIRLLKTMVIVLFNRGNTKKEPTPRDAEDPERSKGNDGTGDQGEESRHNIGAQGHQFFPPNYGTCFEFVKLVS 329 (763)
Q Consensus 250 ~~~~~~~~~~~~~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~p~~~~~~~~~~~~~~ 329 (763)
+++...+
T Consensus 250 ~~A~~~g------------------------------------------------------------------------- 256 (437)
T 1n11_A 250 HLAAQEG------------------------------------------------------------------------- 256 (437)
T ss_dssp HHHHHTT-------------------------------------------------------------------------
T ss_pred HHHHHCC-------------------------------------------------------------------------
Confidence 6663321
Q ss_pred chhhhhhccchhHHHHHHHHHhhhccHHHHHHHHHhccCCce-eccCCCCCCCCCCCCcccccCcccccccCCCCCCCCC
Q 004286 330 KPMLVILGLGSTKIRKIRDEKQKHTWSVQILDELLRRTSLYE-YDYVGGKPLRRPSSQVEEDETIPYAIVDGGDTDADLE 408 (763)
Q Consensus 330 ~~~~~~~~~g~~~l~~~~~~~~~~~~~~~iv~~Ll~~~~~~~-~d~~G~tpL~~a~~~~~~~~~~~~~~~~g~~~~~~~~ 408 (763)
..++++.|++++++.+ .|..|.||||+|+..++.
T Consensus 257 --------------------------~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~------------------- 291 (437)
T 1n11_A 257 --------------------------HAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHV------------------- 291 (437)
T ss_dssp --------------------------CHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCH-------------------
T ss_pred --------------------------CHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCH-------------------
Confidence 1278888998888654 488899999999887543
Q ss_pred CCCCCCCccccCccccccccccccCCCCCccccCCCCCCCCCCCCCCCCcHHHHHHHcChHHHHHHHHHhCCcccccccc
Q 004286 409 GDQQPDTSLTDHNVVTDTHKLSRNNGKNSEDRNEGGKTGSTIPDTVKRETPILIAAKNGITEIVEKILKSFPVAILDMNS 488 (763)
Q Consensus 409 g~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~G~tpLh~Aa~~g~~eiv~~LL~~~~~~~~~~d~ 488 (763)
.++++|+++++ +.+..|..|.||||+|+..|+.++|++|++ .+.+++.+|.
T Consensus 292 ---~~~~~Ll~~g~-------------------------~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~gad~n~~~~ 342 (437)
T 1n11_A 292 ---PVADVLIKHGV-------------------------MVDATTRMGYTPLHVASHYGNIKLVKFLLQ-HQADVNAKTK 342 (437)
T ss_dssp ---HHHHHHHHHTC-------------------------CTTCCCSSCCCHHHHHHHSSCSHHHHHHHH-TTCCTTCCCT
T ss_pred ---HHHHHHHhCCc-------------------------cCCCCCCCCCCHHHHHHHcCcHHHHHHHHh-cCCCCCCCCC
Confidence 34445444444 334567789999999999999999999999 5777899999
Q ss_pred CCCchhHHHHHcCChHHHHHHHhccchhhhhhccccCCCCchhhhHhhcCC
Q 004286 489 EKKNVMLLAVENRQRHVYQLLLKTAIIQETVFRKVDDQGNSALHLAATLGD 539 (763)
Q Consensus 489 ~G~T~LH~A~~~~~~~iv~~Ll~~~~~~~~~~n~~D~~G~TpLH~Aa~~g~ 539 (763)
.|+||||+|+.+|+.++|++|++.++ +++.+|.+|+||||+|++.|+
T Consensus 343 ~g~t~L~~A~~~g~~~iv~~Ll~~ga----~~~~~~~~g~t~l~~A~~~g~ 389 (437)
T 1n11_A 343 LGYSPLHQAAQQGHTDIVTLLLKNGA----SPNEVSSDGTTPLAIAKRLGY 389 (437)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTTC----CSCCCCSSSCCHHHHHHHTTC
T ss_pred CCCCHHHHHHHCChHHHHHHHHHCcC----CCCCCCCCCCCHHHHHHHcCc
Confidence 99999999999999999999999998 689999999999999999998
No 3
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=1.7e-43 Score=378.15 Aligned_cols=204 Identities=22% Similarity=0.146 Sum_probs=175.2
Q ss_pred hhHHHHHHHHcCCHHHHHHHHccCCCccccccCC-CCChHHHHHHHcCCHHHHHHHHHHhhhhccccccccCCCCCchHH
Q 004286 10 LKKGLFKSAMKGKWNEVVENYGKDDRIHEARITR-SGGTALHIAVSDGQEEIVEDLVRIIHEKQQLKVLKIGDERGSTPL 88 (763)
Q Consensus 10 ~~~~L~~aa~~g~~~~v~~lL~~~~~~~~~~~d~-~g~TpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~d~~g~TpL 88 (763)
..++||.|+..|+.+.|+.||+. |+++|.++. .|+||||+||..|+.++|++|+++| ++++.+|..+.+|+
T Consensus 25 ~~t~L~~Av~~g~~~~V~~LL~~--Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~g------a~~~~~~~~~~~~~ 96 (337)
T 4g8k_A 25 DNHLLIKAVQNEDVDLVQQLLEG--GANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHG------ADPVLRKKNGATPF 96 (337)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHH--TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTT------CCTTCCCTTCCCHH
T ss_pred CChHHHHHHHcCCHHHHHHHHHC--CCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcC------CchhhhccCCCchh
Confidence 46789999999999999999988 899988765 5999999999999999999999998 67889999999999
Q ss_pred HHHHHcCCHHHHHHHHhcCCCccCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCC-----CccccCCCCChHHHHH
Q 004286 89 HIAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAARHGHKDAFLCLHYLCASVDDG-----YNYSRRKNGETILHYA 163 (763)
Q Consensus 89 h~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~-----~~~~~d~~G~TpLh~A 163 (763)
+.++..++..++..+++.+++ ++.+|..|.||||+|+..|+.+++++|+++|++++.. +....+..|.||||+|
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~-~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A 175 (337)
T 4g8k_A 97 ILAAIAGSVKLLKLFLSKGAD-VNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDA 175 (337)
T ss_dssp HHHHHHTCHHHHHHHHTTTCC-TTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHH
T ss_pred HHHHhcccchhhHHhhhccch-hhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHH
Confidence 999999999999999999998 8999999999999999999999999999999988731 2234567799999999
Q ss_pred HHcCChHHHHHHHHHhccccccccccCCCcHHHHHhcCCCCccCCchHHHHHHHHHcCCCCCc
Q 004286 164 ISGYYFVDLAFQIIHLYEKLVNFVNERGVSPLHLLATKPNAFRSGSHLGLCTGIIYHCISVDK 226 (763)
Q Consensus 164 ~~~g~~~~iv~~LL~~~~~~~~~~d~~G~TpLh~A~~~~~~~~~~~~~~iv~~Ll~~ga~~~~ 226 (763)
+..|+. +++++||++.|++++.+|..|.||||.++..+.. +....++++|+++|+++|.
T Consensus 176 ~~~g~~-~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~---~~~~~i~~lLl~~gad~n~ 234 (337)
T 4g8k_A 176 AEKGHV-EVLKILLDEMGADVNACDNMGRNALIHALLSSDD---SDVEAITHLLLDHGADVNV 234 (337)
T ss_dssp HHHTCH-HHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCT---TTHHHHHHHHHHTTCCTTC
T ss_pred HHCCCH-HHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCc---ccHHHHHHHHHHCCCCCCC
Confidence 999999 9999999878999999999999999988765431 1223566667777766654
No 4
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=6.3e-42 Score=356.15 Aligned_cols=199 Identities=23% Similarity=0.180 Sum_probs=177.7
Q ss_pred hhhHHHHHHHHcCCHHHHHHHHccCCCcccccc-CCCCChHHHHHHHcCCHHHHHHHHHHhhhhccccccccCCCCCchH
Q 004286 9 QLKKGLFKSAMKGKWNEVVENYGKDDRIHEARI-TRSGGTALHIAVSDGQEEIVEDLVRIIHEKQQLKVLKIGDERGSTP 87 (763)
Q Consensus 9 ~~~~~L~~aa~~g~~~~v~~lL~~~~~~~~~~~-d~~g~TpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~d~~g~Tp 87 (763)
+..++|+.|+..|+.+.++.++.. +.+++.. +..|+||||+|+..|+.+++++|+++| ++++.+|..|.||
T Consensus 4 ~g~~~L~~A~~~g~~~~v~~Ll~~--g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g------~~~~~~~~~g~t~ 75 (285)
T 1wdy_A 4 EDNHLLIKAVQNEDVDLVQQLLEG--GANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHG------ADPVLRKKNGATP 75 (285)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTT------CCTTCCCTTCCCH
T ss_pred ccchHHHHHHHcCCHHHHHHHHHc--CCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcC------CCCcccCCCCCCH
Confidence 346899999999999999999988 7777776 788999999999999999999999998 6788999999999
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCccCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCcccc----------CCCCC
Q 004286 88 LHIAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAARHGHKDAFLCLHYLCASVDDGYNYSR----------RKNGE 157 (763)
Q Consensus 88 Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~----------d~~G~ 157 (763)
||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..|+.+++++|+++|++++ .. +..|.
T Consensus 76 L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-----~~~~~~~~~~~~~~~g~ 149 (285)
T 1wdy_A 76 FLLAAIAGSVKLLKLFLSKGAD-VNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVN-----LRRKTKEDQERLRKGGA 149 (285)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCC-TTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTT-----CCCCCCHHHHHTTCCCC
T ss_pred HHHHHHcCCHHHHHHHHHcCCC-CCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcc-----cccccHHHHHhhccCCC
Confidence 9999999999999999999998 89999999999999999999999999999999988 44 78899
Q ss_pred hHHHHHHHcCChHHHHHHHHHhccccccccccCCCcHHHHHhcCCCCccCCchHHHHHHHHHcCCCCC
Q 004286 158 TILHYAISGYYFVDLAFQIIHLYEKLVNFVNERGVSPLHLLATKPNAFRSGSHLGLCTGIIYHCISVD 225 (763)
Q Consensus 158 TpLh~A~~~g~~~~iv~~LL~~~~~~~~~~d~~G~TpLh~A~~~~~~~~~~~~~~iv~~Ll~~ga~~~ 225 (763)
||||+|+..|+. +++++|++..|++++..|..|.||||+|+..++. ....+++++|+++|++++
T Consensus 150 t~L~~A~~~~~~-~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~---~~~~~i~~~Ll~~g~~~~ 213 (285)
T 1wdy_A 150 TALMDAAEKGHV-EVLKILLDEMGADVNACDNMGRNALIHALLSSDD---SDVEAITHLLLDHGADVN 213 (285)
T ss_dssp CHHHHHHHHTCH-HHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCT---TTHHHHHHHHHHTTCCSS
T ss_pred cHHHHHHHcCCH-HHHHHHHHhcCCCCCccCCCCCCHHHHHHHcccc---chHHHHHHHHHHcCCCCC
Confidence 999999999999 9999999977999999999999999999998742 111456666666555544
No 5
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=4.5e-41 Score=361.04 Aligned_cols=279 Identities=16% Similarity=0.134 Sum_probs=238.1
Q ss_pred hhhHHHHHHHHcCCHHHHHHHHccCCCccccccCCCCChHHHHHHHcCCHHHHHHHHHHhhhhccccccccCCCCCchHH
Q 004286 9 QLKKGLFKSAMKGKWNEVVENYGKDDRIHEARITRSGGTALHIAVSDGQEEIVEDLVRIIHEKQQLKVLKIGDERGSTPL 88 (763)
Q Consensus 9 ~~~~~L~~aa~~g~~~~v~~lL~~~~~~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~d~~g~TpL 88 (763)
...++||.||..|+.+.++.+|.+. +.+++..|..|+||||+||..|+.++|++|+++| ++++.+|..|+|||
T Consensus 23 ~~~~~L~~A~~~g~~~~v~~ll~~~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g------~~~~~~~~~g~t~L 95 (351)
T 3utm_A 23 YKKDELLEAARSGNEEKLMALLTPL-NVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHG------ADVHAKDKGGLVPL 95 (351)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHCCTT-TTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTT------CCTTCCCTTCCCHH
T ss_pred ccchhHHHHHHcCCHHHHHHHHHhc-CCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcC------CCCCccCCCCCcHH
Confidence 3578999999999999999999874 7888899999999999999999999999999998 67899999999999
Q ss_pred HHHHHcCCHHHHHHHHhcCCCccCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCccccCCCCChHHHHHH----
Q 004286 89 HIAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAARHGHKDAFLCLHYLCASVDDGYNYSRRKNGETILHYAI---- 164 (763)
Q Consensus 89 h~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~d~~G~TpLh~A~---- 164 (763)
|+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..|+.+++++|+++|++++ ..+..|.||+|+|+
T Consensus 96 ~~A~~~g~~~iv~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-----~~~~~g~~~l~~a~~~~~ 169 (351)
T 3utm_A 96 HNACSYGHYEVTELLLKHGAC-VNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPT-----LVNCHGKSAVDMAPTPEL 169 (351)
T ss_dssp HHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-----CCCTTSCCHHHHCSSHHH
T ss_pred HHHHHCCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCc-----cccCCCCcchHHHhhhhh
Confidence 999999999999999999998 99999999999999999999999999999999998 89999999988764
Q ss_pred -----------------HcCChHHHHHHHHHhccccccccccCCCcHHHHHhcCCCCccCCchHHHHHHHHHcCCCCCcc
Q 004286 165 -----------------SGYYFVDLAFQIIHLYEKLVNFVNERGVSPLHLLATKPNAFRSGSHLGLCTGIIYHCISVDKL 227 (763)
Q Consensus 165 -----------------~~g~~~~iv~~LL~~~~~~~~~~d~~G~TpLh~A~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~ 227 (763)
..++. +.++.++.. +......+..|.||||+|+..+.. ...+++++|+++|++++.
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~-~~~~~~~~~~~~t~L~~A~~~~~~----~~~~~~~~Ll~~g~~~~~- 242 (351)
T 3utm_A 170 RERLTYEFKGHSLLQAAREADL-AKVKKTLAL-EIINFKQPQSHETALHCAVASLHP----KRKQVAELLLRKGANVNE- 242 (351)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCH-HHHHHHTTT-CCTTCCCTTTCCCHHHHHHHCCST----THHHHHHHHHHTTCCTTC-
T ss_pred HHHHHhhhcccHHHHHHHhccH-HHHHHHHHh-hcccccCCCCCCCHHHHHHHHhCc----cHHHHHHHHHHcCCCcCC-
Confidence 44555 555555553 323334566777788877776421 134555555555554442
Q ss_pred ccccccccchhhhccccCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCccCCCCCCCCCCCcccccccc
Q 004286 228 QEETSYDQHLFTTIKKQTNYPENYETCLNFIRLLKTMVIVLFNRGNTKKEPTPRDAEDPERSKGNDGTGDQGEESRHNIG 307 (763)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (763)
T Consensus 243 -------------------------------------------------------------------------------- 242 (351)
T 3utm_A 243 -------------------------------------------------------------------------------- 242 (351)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCccCCCCCCCchhhHHhhccchhhhhhccchhHHHHHHHHHhhhccHHHHHHHHHhccCCceeccCCCCCCCCCCCCc
Q 004286 308 AQGHQFFPPNYGTCFEFVKLVSKPMLVILGLGSTKIRKIRDEKQKHTWSVQILDELLRRTSLYEYDYVGGKPLRRPSSQV 387 (763)
Q Consensus 308 l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~iv~~Ll~~~~~~~~d~~G~tpL~~a~~~~ 387 (763)
T Consensus 243 -------------------------------------------------------------------------------- 242 (351)
T 3utm_A 243 -------------------------------------------------------------------------------- 242 (351)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccCcccccccCCCCCCCCCCCCCCCCccccCccccccccccccCCCCCccccCCCCCCCCCCCCCCCCcHHHHHHHcC
Q 004286 388 EEDETIPYAIVDGGDTDADLEGDQQPDTSLTDHNVVTDTHKLSRNNGKNSEDRNEGGKTGSTIPDTVKRETPILIAAKNG 467 (763)
Q Consensus 388 ~~~~~~~~~~~~g~~~~~~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~G~tpLh~Aa~~g 467 (763)
+|..|.||||+|++.|
T Consensus 243 ----------------------------------------------------------------~~~~g~t~L~~A~~~g 258 (351)
T 3utm_A 243 ----------------------------------------------------------------KNKDFMTPLHVAAERA 258 (351)
T ss_dssp ----------------------------------------------------------------CCTTCCCHHHHHHHTT
T ss_pred ----------------------------------------------------------------cCCCCCCHHHHHHHcC
Confidence 3456999999999999
Q ss_pred hHHHHHHHHHhCCccccccccCCCchhHHHHHcCChHHHHHHHhccchhhhhhccccCCCCchhhhHhh
Q 004286 468 ITEIVEKILKSFPVAILDMNSEKKNVMLLAVENRQRHVYQLLLKTAIIQETVFRKVDDQGNSALHLAAT 536 (763)
Q Consensus 468 ~~eiv~~LL~~~~~~~~~~d~~G~T~LH~A~~~~~~~iv~~Ll~~~~~~~~~~n~~D~~G~TpLH~Aa~ 536 (763)
+.++|++|++ .+.+++.+|..|+||||+|+.+|+.+++++|++.++ +++.+|.+|+||||+|..
T Consensus 259 ~~~~v~~Ll~-~ga~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga----d~~~~~~~g~tal~~a~~ 322 (351)
T 3utm_A 259 HNDVMEVLHK-HGAKMNALDSLGQTALHRAALAGHLQTCRLLLSYGS----DPSIISLQGFTAAQMGNE 322 (351)
T ss_dssp CHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC----CTTCCCTTSCCHHHHSCH
T ss_pred CHHHHHHHHH-CCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCC----CCCCcCCCCCChhhhhhH
Confidence 9999999999 577889999999999999999999999999999998 689999999999999943
No 6
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=5.3e-41 Score=344.99 Aligned_cols=245 Identities=19% Similarity=0.161 Sum_probs=220.1
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHHhhhhccccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCccCCCCCCCChHHH
Q 004286 44 SGGTALHIAVSDGQEEIVEDLVRIIHEKQQLKVLKIGDERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETPFF 123 (763)
Q Consensus 44 ~g~TpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~TpLh 123 (763)
+|+||||+||..|+.+++++|+++| ++++.+|..|+||||+|+..|+.+++++|+++|++ ++.+|..|.||||
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~g------~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~ 74 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLISQG------WAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQ-VNGVTADWHTPLF 74 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTT------CCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCC------CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCCHHH
Confidence 6899999999999999999999988 67999999999999999999999999999999998 9999999999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCCCCccccCCCCChHHHHHHHcCChHHHHHHHHHhccccccccccCCCcHHHHHhcCCC
Q 004286 124 LAARHGHKDAFLCLHYLCASVDDGYNYSRRKNGETILHYAISGYYFVDLAFQIIHLYEKLVNFVNERGVSPLHLLATKPN 203 (763)
Q Consensus 124 ~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~d~~G~TpLh~A~~~g~~~~iv~~LL~~~~~~~~~~d~~G~TpLh~A~~~~~ 203 (763)
+|+..|+.+++++|+++|++++ .+.+|.||||+|+..|+. +++++|++ .|++++..|..|.||||+|+..++
T Consensus 75 ~A~~~~~~~~v~~Ll~~g~~~~------~~~~g~t~L~~A~~~~~~-~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~ 146 (261)
T 2xai_A 75 NACVSGSWDCVNLLLQHGASVQ------PESDLASPIHEAARRGHV-ECVNSLIA-YGGNIDHKISHLGTPLYLACENQQ 146 (261)
T ss_dssp HHHHHTCHHHHHHHHHTTCCSS------CSCTTCCHHHHHHHTTCH-HHHHHHHH-TTCCTTCCBTTTBCHHHHHHHTTC
T ss_pred HHHHcCCHHHHHHHHHCCCCCC------CCCCCCCHHHHHHHcCcH-HHHHHHHH-cCCCCCcCCCCCCCHHHHHHHhCC
Confidence 9999999999999999999987 456799999999999999 99999999 599999999999999999999985
Q ss_pred CccCCchHHHHHHHHHcCCCCCccccccccccchhhhccccCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCC
Q 004286 204 AFRSGSHLGLCTGIIYHCISVDKLQEETSYDQHLFTTIKKQTNYPENYETCLNFIRLLKTMVIVLFNRGNTKKEPTPRDA 283 (763)
Q Consensus 204 ~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ll~~l~~~~~~~~~~~~~~~ 283 (763)
.+++++|+++|++++.
T Consensus 147 -------~~~v~~Ll~~g~~~~~--------------------------------------------------------- 162 (261)
T 2xai_A 147 -------RACVKKLLESGADVNQ--------------------------------------------------------- 162 (261)
T ss_dssp -------HHHHHHHHHHTCCTTC---------------------------------------------------------
T ss_pred -------HHHHHHHHHcCCCCCC---------------------------------------------------------
Confidence 6888888888877662
Q ss_pred CCCccCCCCCCCCCCCcccccccccCCccCCCCCCCchhhHHhhccchhhhhhccchhHHHHHHHHHhhhccHHHHHHHH
Q 004286 284 EDPERSKGNDGTGDQGEESRHNIGAQGHQFFPPNYGTCFEFVKLVSKPMLVILGLGSTKIRKIRDEKQKHTWSVQILDEL 363 (763)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~iv~~L 363 (763)
T Consensus 163 -------------------------------------------------------------------------------- 162 (261)
T 2xai_A 163 -------------------------------------------------------------------------------- 162 (261)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HhccCCceeccCCCCCCCCCCCCcccccCcccccccCCCCCCCCCCCCCCCCccccCccccccccccccCCCCCccccCC
Q 004286 364 LRRTSLYEYDYVGGKPLRRPSSQVEEDETIPYAIVDGGDTDADLEGDQQPDTSLTDHNVVTDTHKLSRNNGKNSEDRNEG 443 (763)
Q Consensus 364 l~~~~~~~~d~~G~tpL~~a~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (763)
T Consensus 163 -------------------------------------------------------------------------------- 162 (261)
T 2xai_A 163 -------------------------------------------------------------------------------- 162 (261)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCCCCCCCCcHHHHHHHcChHHHHHHHHHhCCccccccccCCCchhHHHHHcCChHHHHHHHhccchhh----hh
Q 004286 444 GKTGSTIPDTVKRETPILIAAKNGITEIVEKILKSFPVAILDMNSEKKNVMLLAVENRQRHVYQLLLKTAIIQE----TV 519 (763)
Q Consensus 444 ~~~~~~~~~d~~G~tpLh~Aa~~g~~eiv~~LL~~~~~~~~~~d~~G~T~LH~A~~~~~~~iv~~Ll~~~~~~~----~~ 519 (763)
|..|.||||+|+..|+.++|++|++ .+.+++.+|.+|+||||+|+.++ +++++|++.+.... ..
T Consensus 163 ---------~~~g~t~Lh~A~~~~~~~~v~~Ll~-~gad~~~~d~~g~tpl~~A~~~~--~~~~~ll~~~~~~~l~~~~~ 230 (261)
T 2xai_A 163 ---------GKGQDSPLHAVARTASEELACLLMD-FGADTQAKNAEGKRPVELVPPES--PLAQLFLEREGPPSLMQLCR 230 (261)
T ss_dssp ---------CBTTBCHHHHHHHHTCHHHHHHHHH-TTCCTTCCCTTSCCGGGGSCTTC--THHHHHHHC-CCCCHHHHHH
T ss_pred ---------CCCCCChHHHHHHcCCHHHHHHHHH-cCCCCCCcCCCCCChhhhccccc--cHHHHHHhccCCccHHHHHH
Confidence 2258999999999999999999999 57778999999999999999655 58999999865321 25
Q ss_pred hccccCCCCchhhhHhhcCC
Q 004286 520 FRKVDDQGNSALHLAATLGD 539 (763)
Q Consensus 520 ~n~~D~~G~TpLH~Aa~~g~ 539 (763)
++.+|..|+||||+|++...
T Consensus 231 ~~~r~~~g~t~l~~~~~~~~ 250 (261)
T 2xai_A 231 LRIRKCFGIQQHHKITKLVL 250 (261)
T ss_dssp HHHHTTSCTTCGGGGGGSSS
T ss_pred HHHHHHhchhccccCcccCC
Confidence 67889999999999998764
No 7
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=2.4e-40 Score=344.12 Aligned_cols=165 Identities=19% Similarity=0.140 Sum_probs=153.4
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHHHhhhhccccccccC-CCCCchHHHHHHHcCCHHHHHHHHhcCCCccCCCCCCCChH
Q 004286 43 RSGGTALHIAVSDGQEEIVEDLVRIIHEKQQLKVLKIG-DERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETP 121 (763)
Q Consensus 43 ~~g~TpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~-d~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~Tp 121 (763)
.+|.||||.|+..|+.+++++|++.| .+++.+ +..|+||||+|+..|+.+++++|+++|++ ++.+|..|.||
T Consensus 3 ~~g~~~L~~A~~~g~~~~v~~Ll~~g------~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~ 75 (285)
T 1wdy_A 3 VEDNHLLIKAVQNEDVDLVQQLLEGG------ANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGAD-PVLRKKNGATP 75 (285)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHTT------CCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCH
T ss_pred cccchHHHHHHHcCCHHHHHHHHHcC------CCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-CcccCCCCCCH
Confidence 35889999999999999999999998 567777 78899999999999999999999999998 89999999999
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCCCccccCCCCChHHHHHHHcCChHHHHHHHHHhcccccccc----------ccCC
Q 004286 122 FFLAARHGHKDAFLCLHYLCASVDDGYNYSRRKNGETILHYAISGYYFVDLAFQIIHLYEKLVNFV----------NERG 191 (763)
Q Consensus 122 Lh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~d~~G~TpLh~A~~~g~~~~iv~~LL~~~~~~~~~~----------d~~G 191 (763)
||+|+..|+.+++++|+++|++++ .+|..|.||||+|+..|+. +++++|++. |++++.. +..|
T Consensus 76 L~~A~~~~~~~~v~~Ll~~g~~~~-----~~~~~g~t~L~~A~~~~~~-~~~~~Ll~~-g~~~~~~~~~~~~~~~~~~~g 148 (285)
T 1wdy_A 76 FLLAAIAGSVKLLKLFLSKGADVN-----ECDFYGFTAFMEAAVYGKV-KALKFLYKR-GANVNLRRKTKEDQERLRKGG 148 (285)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTT-----CBCTTCCBHHHHHHHTTCH-HHHHHHHHT-TCCTTCCCCCCHHHHHTTCCC
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCC-----ccCcccCCHHHHHHHhCCH-HHHHHHHHh-CCCcccccccHHHHHhhccCC
Confidence 999999999999999999999998 8999999999999999999 999999994 8888887 7889
Q ss_pred CcHHHHHhcCCCCccCCchHHHHHHHHHc-CCCCCccc
Q 004286 192 VSPLHLLATKPNAFRSGSHLGLCTGIIYH-CISVDKLQ 228 (763)
Q Consensus 192 ~TpLh~A~~~~~~~~~~~~~~iv~~Ll~~-ga~~~~~~ 228 (763)
.||||+|+..++ .+++++|+++ |++++..+
T Consensus 149 ~t~L~~A~~~~~-------~~~v~~Ll~~~~~~~~~~~ 179 (285)
T 1wdy_A 149 ATALMDAAEKGH-------VEVLKILLDEMGADVNACD 179 (285)
T ss_dssp CCHHHHHHHHTC-------HHHHHHHHHTSCCCTTCCC
T ss_pred CcHHHHHHHcCC-------HHHHHHHHHhcCCCCCccC
Confidence 999999999985 7999999987 88887655
No 8
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=1.1e-41 Score=368.84 Aligned_cols=289 Identities=16% Similarity=0.183 Sum_probs=225.4
Q ss_pred hHHHHHHHHcCCHHHHHHHHccCCC----------------------ccccccCCCCChHHHHHHHcCCHHHHHHHHHHh
Q 004286 11 KKGLFKSAMKGKWNEVVENYGKDDR----------------------IHEARITRSGGTALHIAVSDGQEEIVEDLVRII 68 (763)
Q Consensus 11 ~~~L~~aa~~g~~~~v~~lL~~~~~----------------------~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~g 68 (763)
..+|+.++..|+.+.++.++..... ...+..|..|+||||+|+..|+ +++++|+.
T Consensus 38 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~t~L~~Aa~~~~-~~~~~L~~-- 114 (373)
T 2fo1_E 38 QHSLLEASYDGYIKRQRNELQHYSLYPNPQGYGNGNDFLGDFNHTNLQIPTEPEPESPIKLHTEAAGSY-AITEPITR-- 114 (373)
T ss_dssp --------------------------------------------------------CCCHHHHHHHSSS-CCCSCCST--
T ss_pred ccccccccCCccccchhhhhhhhccccCccccCCCCCccccccccccccccCCCCCCccHHHHHhcCCc-hHHHHhcc--
Confidence 4566777766666655554422110 1123567889999999999665 78887764
Q ss_pred hhhccccccccCC-CCCchHHHHHHHcCCHHHHHHHH--------hcCCCccCCCCCCCChHHHHHHHcCCHHHHHHHHH
Q 004286 69 HEKQQLKVLKIGD-ERGSTPLHIAAGLGNVSMCKCIA--------TADPRLIGERNHENETPFFLAARHGHKDAFLCLHY 139 (763)
Q Consensus 69 ~~~~~~~~~~~~d-~~g~TpLh~Aa~~g~~~~v~~Ll--------~~~~~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~ 139 (763)
.+++.+| ..|+||||+|+..|+.++++.|+ +.|++ ++.+|..|.||||+|+..|+.+++++|++
T Consensus 115 ------~~~n~~d~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~-vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~ 187 (373)
T 2fo1_E 115 ------ESVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGAD-VNAMDCDENTPLMLAVLARRRRLVAYLMK 187 (373)
T ss_dssp ------TTTTTCCCSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHH
T ss_pred ------ccccccCCcCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCC-CcCCCCCCCCHHHHHHHcChHHHHHHHHH
Confidence 4588888 78999999999999988877776 78888 99999999999999999999999999999
Q ss_pred cCCCCCCCCccccCCCCChHHHHHHHcCChHHHHHHHHHhcc---ccccccccCCCcHHHHHhcCCCCccCCchHHHHHH
Q 004286 140 LCASVDDGYNYSRRKNGETILHYAISGYYFVDLAFQIIHLYE---KLVNFVNERGVSPLHLLATKPNAFRSGSHLGLCTG 216 (763)
Q Consensus 140 ~ga~~~~~~~~~~d~~G~TpLh~A~~~g~~~~iv~~LL~~~~---~~~~~~d~~G~TpLh~A~~~~~~~~~~~~~~iv~~ 216 (763)
+|++++ .+|..|.||||+|+..|+. +++++|++. + ++++..|.+|.||||+|+..+. ..+.+++++
T Consensus 188 ~ga~~~-----~~~~~g~t~L~~A~~~g~~-~~v~~Ll~~-~~~~~~~~~~d~~g~t~L~~A~~~~~----~~~~~~v~~ 256 (373)
T 2fo1_E 188 AGADPT-----IYNKSERSALHQAAANRDF-GMMVYMLNS-TKLKGDIEELDRNGMTALMIVAHNEG----RDQVASAKL 256 (373)
T ss_dssp TTCCSC-----CCCTTCCCHHHHHHHTTCH-HHHHHHTTS-HHHHHTTSCCCTTSCCHHHHHHHSCS----TTHHHHHHH
T ss_pred CCCCCc-----ccCCCCCCHHHHHHHCCCH-HHHHHHHhc-CccccChhhcCCCCCCHHHHHHHhCC----cchHHHHHH
Confidence 999998 8999999999999999999 999999985 5 7999999999999999998762 124789999
Q ss_pred HHHcCCCCCccccccccccchhhhccccCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCccCCCCCCCC
Q 004286 217 IIYHCISVDKLQEETSYDQHLFTTIKKQTNYPENYETCLNFIRLLKTMVIVLFNRGNTKKEPTPRDAEDPERSKGNDGTG 296 (763)
Q Consensus 217 Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (763)
|+++|++++.....
T Consensus 257 Ll~~g~~~~~~~~~------------------------------------------------------------------ 270 (373)
T 2fo1_E 257 LVEKGAKVDYDGAA------------------------------------------------------------------ 270 (373)
T ss_dssp HHHHTCCSSCCSGG------------------------------------------------------------------
T ss_pred HHHCCCCccccccc------------------------------------------------------------------
Confidence 99999888753311
Q ss_pred CCCcccccccccCCccCCCCCCCchhhHHhhccchhhhhhccchhHHHHHHHHHhhhccHHHHHHHHHhccCCceeccCC
Q 004286 297 DQGEESRHNIGAQGHQFFPPNYGTCFEFVKLVSKPMLVILGLGSTKIRKIRDEKQKHTWSVQILDELLRRTSLYEYDYVG 376 (763)
Q Consensus 297 ~~~~~~~~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~iv~~Ll~~~~~~~~d~~G 376 (763)
T Consensus 271 -------------------------------------------------------------------------------- 270 (373)
T 2fo1_E 271 -------------------------------------------------------------------------------- 270 (373)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCCCCcccccCcccccccCCCCCCCCCCCCCCCCccccCccccccccccccCCCCCccccCCCCCCCCCCCCCCC
Q 004286 377 GKPLRRPSSQVEEDETIPYAIVDGGDTDADLEGDQQPDTSLTDHNVVTDTHKLSRNNGKNSEDRNEGGKTGSTIPDTVKR 456 (763)
Q Consensus 377 ~tpL~~a~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~G 456 (763)
..+..|..|
T Consensus 271 -----------------------------------------------------------------------~~~~~d~~g 279 (373)
T 2fo1_E 271 -----------------------------------------------------------------------RKDSEKYKG 279 (373)
T ss_dssp -----------------------------------------------------------------------GTSSSSCCC
T ss_pred -----------------------------------------------------------------------ccCcccccC
Confidence 000145679
Q ss_pred CcHHHHHHHcChHHHHHHHHHhCCccccccccCCCchhHHHHHcCChHHHHHHHhccchhhhhhccccCCCCchhhhHhh
Q 004286 457 ETPILIAAKNGITEIVEKILKSFPVAILDMNSEKKNVMLLAVENRQRHVYQLLLKTAIIQETVFRKVDDQGNSALHLAAT 536 (763)
Q Consensus 457 ~tpLh~Aa~~g~~eiv~~LL~~~~~~~~~~d~~G~T~LH~A~~~~~~~iv~~Ll~~~~~~~~~~n~~D~~G~TpLH~Aa~ 536 (763)
.||||+||..|+.++|++|++..+.+++.+|.+|+||||+|+.+|+.++|++|++.++ +++.+|..|+||||+|+.
T Consensus 280 ~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga----d~~~~d~~g~t~l~~A~~ 355 (373)
T 2fo1_E 280 RTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGA----SVEAVDATDHTARQLAQA 355 (373)
T ss_dssp CCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTC----CSSCCCSSSCCHHHHHHH
T ss_pred CCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCC----CccCCCCCCCCHHHHHHH
Confidence 9999999999999999999998888999999999999999999999999999999998 699999999999999999
Q ss_pred cCCCC
Q 004286 537 LGDHK 541 (763)
Q Consensus 537 ~g~~~ 541 (763)
.|+.+
T Consensus 356 ~g~~~ 360 (373)
T 2fo1_E 356 NNHHN 360 (373)
T ss_dssp TTCHH
T ss_pred cCCHH
Confidence 99844
No 9
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=4e-41 Score=361.40 Aligned_cols=314 Identities=18% Similarity=0.158 Sum_probs=252.5
Q ss_pred CccccccCCCCChHHHHHHHcCCHHHHHHHHHHhhhhccccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCccCCC
Q 004286 35 RIHEARITRSGGTALHIAVSDGQEEIVEDLVRIIHEKQQLKVLKIGDERGSTPLHIAAGLGNVSMCKCIATADPRLIGER 114 (763)
Q Consensus 35 ~~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~ 114 (763)
+++.+..+..|.|+||.||..|+.+.++.|+... +.+++.+|..|+||||+|+..|+.+++++|+++|++ ++.+
T Consensus 14 ~~~~~~~~~~~~~~L~~A~~~g~~~~v~~ll~~~-----~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~ 87 (351)
T 3utm_A 14 SAKAVLTGEYKKDELLEAARSGNEEKLMALLTPL-----NVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGAD-VHAK 87 (351)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCHHHHHHHCCTT-----TTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCC
T ss_pred ceeeeeeccccchhHHHHHHcCCHHHHHHHHHhc-----CCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCcc
Confidence 5666667788999999999999999999998752 367899999999999999999999999999999998 9999
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCccccCCCCChHHHHHHHcCChHHHHHHHHHhccccccccccCCCcH
Q 004286 115 NHENETPFFLAARHGHKDAFLCLHYLCASVDDGYNYSRRKNGETILHYAISGYYFVDLAFQIIHLYEKLVNFVNERGVSP 194 (763)
Q Consensus 115 ~~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~d~~G~TpLh~A~~~g~~~~iv~~LL~~~~~~~~~~d~~G~Tp 194 (763)
|..|.||||+|+..|+.+++++|+++|++++ ..|..|.||||+|+..|+. +++++|++ .|++++..+..|.||
T Consensus 88 ~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~-----~~~~~g~t~L~~A~~~~~~-~~v~~Ll~-~g~~~~~~~~~g~~~ 160 (351)
T 3utm_A 88 DKGGLVPLHNACSYGHYEVTELLLKHGACVN-----AMDLWQFTPLHEAASKNRV-EVCSLLLS-HGADPTLVNCHGKSA 160 (351)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-----CCCTTCCCHHHHHHHTTCH-HHHHHHHH-TTCCTTCCCTTSCCH
T ss_pred CCCCCcHHHHHHHCCCHHHHHHHHHCCCCCC-----CCCCCCCCHHHHHHHcCCH-HHHHHHHH-cCCCCccccCCCCcc
Confidence 9999999999999999999999999999998 8999999999999999999 99999999 599999999999999
Q ss_pred HHHHhcCCCCccCCchHHHHHHHHHcCCCCCccccccccccchhhhccccCCCCccHHHHHHHHHHHHHHHHHHHhCCCC
Q 004286 195 LHLLATKPNAFRSGSHLGLCTGIIYHCISVDKLQEETSYDQHLFTTIKKQTNYPENYETCLNFIRLLKTMVIVLFNRGNT 274 (763)
Q Consensus 195 Lh~A~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ll~~l~~~~~~ 274 (763)
+|+|+..+. .+.+++..... .++....
T Consensus 161 l~~a~~~~~-------~~~~~~~~~~~-----------------------------------------~~~~~~~----- 187 (351)
T 3utm_A 161 VDMAPTPEL-------RERLTYEFKGH-----------------------------------------SLLQAAR----- 187 (351)
T ss_dssp HHHCSSHHH-------HHHHHHHHHHH-----------------------------------------HHHHHHH-----
T ss_pred hHHHhhhhh-------HHHHHhhhccc-----------------------------------------HHHHHHH-----
Confidence 999987642 23333221100 0000000
Q ss_pred CCCCCCCCCCCCccCCCCCCCCCCCcccccccccCCccCCCCCCCchhhHHhhccchhhhhhccchhHHHHHHHHHhhhc
Q 004286 275 KKEPTPRDAEDPERSKGNDGTGDQGEESRHNIGAQGHQFFPPNYGTCFEFVKLVSKPMLVILGLGSTKIRKIRDEKQKHT 354 (763)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~ 354 (763)
.
T Consensus 188 -------------------------------------------------------------------------------~ 188 (351)
T 3utm_A 188 -------------------------------------------------------------------------------E 188 (351)
T ss_dssp -------------------------------------------------------------------------------T
T ss_pred -------------------------------------------------------------------------------h
Confidence 0
Q ss_pred cHHHHHHHHHhccCCceeccCCCCCCCCCCCCcccccCcccccccCCCCCCCCCCCCCCCCccccCccccccccccccCC
Q 004286 355 WSVQILDELLRRTSLYEYDYVGGKPLRRPSSQVEEDETIPYAIVDGGDTDADLEGDQQPDTSLTDHNVVTDTHKLSRNNG 434 (763)
Q Consensus 355 ~~~~iv~~Ll~~~~~~~~d~~G~tpL~~a~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~L~~~~~~~~~~~~~~~~~ 434 (763)
...+.++.++.....
T Consensus 189 ~~~~~~~~~l~~~~~----------------------------------------------------------------- 203 (351)
T 3utm_A 189 ADLAKVKKTLALEII----------------------------------------------------------------- 203 (351)
T ss_dssp TCHHHHHHHTTTCCT-----------------------------------------------------------------
T ss_pred ccHHHHHHHHHhhcc-----------------------------------------------------------------
Confidence 011334444443110
Q ss_pred CCCccccCCCCCCCCCCCCCCCCcHHHHHHHc---ChHHHHHHHHHhCCccccccccCCCchhHHHHHcCChHHHHHHHh
Q 004286 435 KNSEDRNEGGKTGSTIPDTVKRETPILIAAKN---GITEIVEKILKSFPVAILDMNSEKKNVMLLAVENRQRHVYQLLLK 511 (763)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~d~~G~tpLh~Aa~~---g~~eiv~~LL~~~~~~~~~~d~~G~T~LH~A~~~~~~~iv~~Ll~ 511 (763)
....+..|.||||+|+.. +..+++++|++ .+.+++.+|.+|+||||+|+.+|+.+++++|++
T Consensus 204 --------------~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~-~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~ 268 (351)
T 3utm_A 204 --------------NFKQPQSHETALHCAVASLHPKRKQVAELLLR-KGANVNEKNKDFMTPLHVAAERAHNDVMEVLHK 268 (351)
T ss_dssp --------------TCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHH-TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHH
T ss_pred --------------cccCCCCCCCHHHHHHHHhCccHHHHHHHHHH-cCCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 001355799999999999 67899999999 567788999999999999999999999999999
Q ss_pred ccchhhhhhccccCCCCchhhhHhhcCCCCCcCCchhhhhhhhhhHHHHHHhhcCCccccccccCCCCChhhhhhhhhHH
Q 004286 512 TAIIQETVFRKVDDQGNSALHLAATLGDHKPWLIPGAALQMQWELKWYEFVRDSMPFHFFVRYNDQNKSAKDVFTETHKK 591 (763)
Q Consensus 512 ~~~~~~~~~n~~D~~G~TpLH~Aa~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~n~~g~tp~d~~~~~~~~ 591 (763)
.+. ++|.+|..|+||||+|++.|+.+++ ++ +++...+ .+.+|++|.||++++.+.-.+
T Consensus 269 ~ga----~~n~~d~~g~t~L~~A~~~~~~~~v-------------~~--Ll~~gad---~~~~~~~g~tal~~a~~~~~~ 326 (351)
T 3utm_A 269 HGA----KMNALDSLGQTALHRAALAGHLQTC-------------RL--LLSYGSD---PSIISLQGFTAAQMGNEAVQQ 326 (351)
T ss_dssp TTC----CTTCCCTTSCCHHHHHHHHTCHHHH-------------HH--HHHTTCC---TTCCCTTSCCHHHHSCHHHHH
T ss_pred CCC----CCCCcCCCCCCHHHHHHHcCcHHHH-------------HH--HHHcCCC---CCCcCCCCCChhhhhhHHHHH
Confidence 998 7999999999999999999984332 22 2333333 348999999999999776555
Q ss_pred HHHh
Q 004286 592 LVQA 595 (763)
Q Consensus 592 l~~~ 595 (763)
++.+
T Consensus 327 ~l~~ 330 (351)
T 3utm_A 327 ILSE 330 (351)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 5443
No 10
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=3.1e-40 Score=343.66 Aligned_cols=195 Identities=18% Similarity=0.146 Sum_probs=153.5
Q ss_pred hhhHHHHHHHHcCCHHHHHHHHccCCC---------ccccccCCCCChHHHHHHHcCCHHHHHHHHHHhhhhcccccccc
Q 004286 9 QLKKGLFKSAMKGKWNEVVENYGKDDR---------IHEARITRSGGTALHIAVSDGQEEIVEDLVRIIHEKQQLKVLKI 79 (763)
Q Consensus 9 ~~~~~L~~aa~~g~~~~v~~lL~~~~~---------~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~ 79 (763)
+..++||+||..|+.+++.+++...+. ...+..|..|+||||+||..|+.+++++|++.| ++++.
T Consensus 14 ~~~~~lH~Aa~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g------~~~~~ 87 (285)
T 3d9h_A 14 LVPRGSHMASMDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDWSPMHEAAIHGHQLSLRNLISQG------WAVNI 87 (285)
T ss_dssp ----------------------------CCSEECCCCTTCSSSCCSCCHHHHHHHTTCHHHHHHHHHTT------CCSCE
T ss_pred HHHHHHHHHhhcCCCCCcccCCCCccccccchhhhhCcccCCCccCCCHHHHHHHcCCHHHHHHHHHCC------CCCCC
Confidence 457899999999999988886554211 224567899999999999999999999999988 67889
Q ss_pred CCCCCchHHHHHHHcCCHHHHHHHHhcCCCccCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCccccCCCCChH
Q 004286 80 GDERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAARHGHKDAFLCLHYLCASVDDGYNYSRRKNGETI 159 (763)
Q Consensus 80 ~d~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~d~~G~Tp 159 (763)
+|..|+||||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..|+.+++++|+++|++++ .+.+|.||
T Consensus 88 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~------~~~~g~t~ 160 (285)
T 3d9h_A 88 ITADHVSPLHEACLGGHLSCVKILLKHGAQ-VNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQ------PESDLASP 160 (285)
T ss_dssp ECTTCCCHHHHHHHTTCHHHHHHHHHTTCC-SSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSS------CSCTTSCH
T ss_pred cCCCCCCHHHHHHHCCcHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCC------CCCCCCCH
Confidence 999999999999999999999999999998 99999999999999999999999999999999987 34569999
Q ss_pred HHHHHHcCChHHHHHHHHHhccccccccccCCCcHHHHHhcCCCCccCCchHHHHHHHHHcCCCCC
Q 004286 160 LHYAISGYYFVDLAFQIIHLYEKLVNFVNERGVSPLHLLATKPNAFRSGSHLGLCTGIIYHCISVD 225 (763)
Q Consensus 160 Lh~A~~~g~~~~iv~~LL~~~~~~~~~~d~~G~TpLh~A~~~~~~~~~~~~~~iv~~Ll~~ga~~~ 225 (763)
||+|+..|+. +++++|++ .|++++.+|..|.||||+|+..++ .+++++|+++|++++
T Consensus 161 L~~A~~~g~~-~~v~~Ll~-~g~~~~~~d~~g~t~L~~A~~~~~-------~~~v~~Ll~~ga~~~ 217 (285)
T 3d9h_A 161 IHEAARRGHV-ECVNSLIA-YGGNIDHKISHLGTPLYLACENQQ-------RACVKKLLESGADVN 217 (285)
T ss_dssp HHHHHHHTCH-HHHHHHHH-TTCCTTCCBTTTBCHHHHHHHTTC-------HHHHHHHHHTTCCTT
T ss_pred HHHHHHcCCH-HHHHHHHH-CCCCCCCcCCCCCCHHHHHHHcCc-------HHHHHHHHHCCCCCC
Confidence 9999999999 99999999 589999999999999999999985 688888888877665
No 11
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=8.3e-40 Score=340.47 Aligned_cols=249 Identities=16% Similarity=0.123 Sum_probs=196.8
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHHhhhhc-----cccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCccCCCCC
Q 004286 42 TRSGGTALHIAVSDGQEEIVEDLVRIIHEKQ-----QLKVLKIGDERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNH 116 (763)
Q Consensus 42 d~~g~TpLh~A~~~g~~~~v~~Ll~~g~~~~-----~~~~~~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~ 116 (763)
...|.|+||+|+..|+.+.+..++..+++.- ....++.+|..|+||||+|+..|+.++++.|++.|++ ++.+|.
T Consensus 12 ~~~~~~~lH~Aa~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~-~~~~~~ 90 (285)
T 3d9h_A 12 SGLVPRGSHMASMDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDWSPMHEAAIHGHQLSLRNLISQGWA-VNIITA 90 (285)
T ss_dssp ------------------------------CCSEECCCCTTCSSSCCSCCHHHHHHHTTCHHHHHHHHHTTCC-SCEECT
T ss_pred chHHHHHHHHHhhcCCCCCcccCCCCccccccchhhhhCcccCCCccCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCcCC
Confidence 5679999999999999877777776654311 1234677899999999999999999999999999998 999999
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCccccCCCCChHHHHHHHcCChHHHHHHHHHhccccccccccCCCcHHH
Q 004286 117 ENETPFFLAARHGHKDAFLCLHYLCASVDDGYNYSRRKNGETILHYAISGYYFVDLAFQIIHLYEKLVNFVNERGVSPLH 196 (763)
Q Consensus 117 ~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~d~~G~TpLh~A~~~g~~~~iv~~LL~~~~~~~~~~d~~G~TpLh 196 (763)
.|+||||+|+..|+.+++++|+++|++++ .+|..|.||||+|+..|+. +++++|++ .+++++.. .+|.||||
T Consensus 91 ~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~-----~~~~~g~t~L~~A~~~~~~-~~v~~Ll~-~g~~~~~~-~~g~t~L~ 162 (285)
T 3d9h_A 91 DHVSPLHEACLGGHLSCVKILLKHGAQVN-----GVTADWHTPLFNACVSGSW-DCVNLLLQ-HGASVQPE-SDLASPIH 162 (285)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTTCCSS-----CCCTTCCCHHHHHHHHTCH-HHHHHHHH-TTCCSSCS-CTTSCHHH
T ss_pred CCCCHHHHHHHCCcHHHHHHHHHCCCCCC-----CCCCCCCCHHHHHHHcCHH-HHHHHHHH-CCCCCCCC-CCCCCHHH
Confidence 99999999999999999999999999998 8999999999999999999 99999999 58888764 45999999
Q ss_pred HHhcCCCCccCCchHHHHHHHHHcCCCCCccccccccccchhhhccccCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCC
Q 004286 197 LLATKPNAFRSGSHLGLCTGIIYHCISVDKLQEETSYDQHLFTTIKKQTNYPENYETCLNFIRLLKTMVIVLFNRGNTKK 276 (763)
Q Consensus 197 ~A~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ll~~l~~~~~~~~ 276 (763)
+|+..|+ .+++++|+++|++++.
T Consensus 163 ~A~~~g~-------~~~v~~Ll~~g~~~~~-------------------------------------------------- 185 (285)
T 3d9h_A 163 EAARRGH-------VECVNSLIAYGGNIDH-------------------------------------------------- 185 (285)
T ss_dssp HHHHHTC-------HHHHHHHHHTTCCTTC--------------------------------------------------
T ss_pred HHHHcCC-------HHHHHHHHHCCCCCCC--------------------------------------------------
Confidence 9999985 6888888888876653
Q ss_pred CCCCCCCCCCccCCCCCCCCCCCcccccccccCCccCCCCCCCchhhHHhhccchhhhhhccchhHHHHHHHHHhhhccH
Q 004286 277 EPTPRDAEDPERSKGNDGTGDQGEESRHNIGAQGHQFFPPNYGTCFEFVKLVSKPMLVILGLGSTKIRKIRDEKQKHTWS 356 (763)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~ 356 (763)
T Consensus 186 -------------------------------------------------------------------------------- 185 (285)
T 3d9h_A 186 -------------------------------------------------------------------------------- 185 (285)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHhccCCceeccCCCCCCCCCCCCcccccCcccccccCCCCCCCCCCCCCCCCccccCccccccccccccCCCC
Q 004286 357 VQILDELLRRTSLYEYDYVGGKPLRRPSSQVEEDETIPYAIVDGGDTDADLEGDQQPDTSLTDHNVVTDTHKLSRNNGKN 436 (763)
Q Consensus 357 ~~iv~~Ll~~~~~~~~d~~G~tpL~~a~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~~ 436 (763)
T Consensus 186 -------------------------------------------------------------------------------- 185 (285)
T 3d9h_A 186 -------------------------------------------------------------------------------- 185 (285)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CccccCCCCCCCCCCCCCCCCcHHHHHHHcChHHHHHHHHHhCCccccccccCCCchhHHHHHcCChHHHHHHHhccchh
Q 004286 437 SEDRNEGGKTGSTIPDTVKRETPILIAAKNGITEIVEKILKSFPVAILDMNSEKKNVMLLAVENRQRHVYQLLLKTAIIQ 516 (763)
Q Consensus 437 ~~~~~~~~~~~~~~~~d~~G~tpLh~Aa~~g~~eiv~~LL~~~~~~~~~~d~~G~T~LH~A~~~~~~~iv~~Ll~~~~~~ 516 (763)
.|..|.||||+|+..|+.++|++|++. +.+++ .|..|+||||+|+..++.+++++|++.++
T Consensus 186 ---------------~d~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga-- 246 (285)
T 3d9h_A 186 ---------------KISHLGTPLYLACENQQRACVKKLLES-GADVN-QGKGQDSPLHAVVRTASEELACLLMDFGA-- 246 (285)
T ss_dssp ---------------CBTTTBCHHHHHHHTTCHHHHHHHHHT-TCCTT-CCBTTBCHHHHHHHTTCHHHHHHHHHTTC--
T ss_pred ---------------cCCCCCCHHHHHHHcCcHHHHHHHHHC-CCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHHCCC--
Confidence 234699999999999999999999995 55666 48899999999999999999999999988
Q ss_pred hhhhccccCCCCchhhhHhhc
Q 004286 517 ETVFRKVDDQGNSALHLAATL 537 (763)
Q Consensus 517 ~~~~n~~D~~G~TpLH~Aa~~ 537 (763)
+++.+|.+|+||||+|+..
T Consensus 247 --d~~~~d~~g~t~l~~A~~~ 265 (285)
T 3d9h_A 247 --DTQAKNAEGKRPVELVPPE 265 (285)
T ss_dssp --CTTCCCTTSCCGGGGSCTT
T ss_pred --CCCCcCCCCCCHHHHhcCc
Confidence 6999999999999999944
No 12
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=1.6e-40 Score=358.98 Aligned_cols=268 Identities=15% Similarity=0.116 Sum_probs=225.4
Q ss_pred CCCccccccCCCCChHHHHHHHcCCHHHHHHHHHHhhhhccccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCccC
Q 004286 33 DDRIHEARITRSGGTALHIAVSDGQEEIVEDLVRIIHEKQQLKVLKIGDERGSTPLHIAAGLGNVSMCKCIATADPRLIG 112 (763)
Q Consensus 33 ~~~~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~ 112 (763)
.++.+.+..|.+|+||||+||..|+.++|++|+++| ++++.+|..|+||||+|+..|+.+++++|+++|++ ++
T Consensus 8 ~~~~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g------~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~ 80 (364)
T 3ljn_A 8 FPKLNRIKSDDENMEKIHVAARKGQTDEVRRLIETG------VSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEV-HS 80 (364)
T ss_dssp --------CCHHHHHHHHHHHHHTCHHHHHHHHHTT------CCTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCC-CC
T ss_pred ccCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcC------CCccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCC-cc
Confidence 346777788999999999999999999999999988 67899999999999999999999999999999985 43
Q ss_pred CCCCCCChHHHHHHHcCCHHHHHHHHHc----CCCCCC------------CCccccCCCCChHHHHHHHcC--ChHHHHH
Q 004286 113 ERNHENETPFFLAARHGHKDAFLCLHYL----CASVDD------------GYNYSRRKNGETILHYAISGY--YFVDLAF 174 (763)
Q Consensus 113 ~~~~~g~TpLh~A~~~g~~~~v~~Ll~~----ga~~~~------------~~~~~~d~~G~TpLh~A~~~g--~~~~iv~ 174 (763)
+.+|.||||+|+..|+.+++++|+++ |++++. ...+.+|..|.||||+|+..| +. ++++
T Consensus 81 --~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~-~~v~ 157 (364)
T 3ljn_A 81 --LWHGQKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYL-EMIK 157 (364)
T ss_dssp --CBTTBCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGH-HHHH
T ss_pred --ccCCCCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchH-HHHH
Confidence 35799999999999999999999999 766651 011228889999999999999 99 9999
Q ss_pred HHHHhccccccccccCCCcHHHHHhcCCCCccCCchHHHHHHHHHcCCCCCccccccccccchhhhccccCCCCccHHHH
Q 004286 175 QIIHLYEKLVNFVNERGVSPLHLLATKPNAFRSGSHLGLCTGIIYHCISVDKLQEETSYDQHLFTTIKKQTNYPENYETC 254 (763)
Q Consensus 175 ~LL~~~~~~~~~~d~~G~TpLh~A~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 254 (763)
+|++. |++++..|..|.||||+|+..|+ .+++++|+++|++....+
T Consensus 158 ~Ll~~-ga~~~~~d~~g~t~L~~A~~~g~-------~~~v~~Ll~~g~~~~~~~-------------------------- 203 (364)
T 3ljn_A 158 ILVQL-GASPTAKDKADETPLMRAMEFRN-------REALDLMMDTVPSKSSLR-------------------------- 203 (364)
T ss_dssp HHHHH-TCCTTCCCTTSCCHHHHHHHTTC-------HHHHHHHHHHCSCSSSCC--------------------------
T ss_pred HHHHc-CCCCcccCCCCCCHHHHHHHcCC-------HHHHHHHHhccccccccc--------------------------
Confidence 99995 99999999999999999999985 689999988887633211
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCccCCCCCCCCCCCcccccccccCCccCCCCCCCchhhHHhhccchhhh
Q 004286 255 LNFIRLLKTMVIVLFNRGNTKKEPTPRDAEDPERSKGNDGTGDQGEESRHNIGAQGHQFFPPNYGTCFEFVKLVSKPMLV 334 (763)
Q Consensus 255 ~~~~~~~~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~~ 334 (763)
T Consensus 204 -------------------------------------------------------------------------------- 203 (364)
T 3ljn_A 204 -------------------------------------------------------------------------------- 203 (364)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhccchhHHHHHHHHHhhhccHHHHHHHHHhccCCceeccCCCCCCCCCCCCcccccCcccccccCCCCCCCCCCCCCCC
Q 004286 335 ILGLGSTKIRKIRDEKQKHTWSVQILDELLRRTSLYEYDYVGGKPLRRPSSQVEEDETIPYAIVDGGDTDADLEGDQQPD 414 (763)
Q Consensus 335 ~~~~g~~~l~~~~~~~~~~~~~~~iv~~Ll~~~~~~~~d~~G~tpL~~a~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~ 414 (763)
T Consensus 204 -------------------------------------------------------------------------------- 203 (364)
T 3ljn_A 204 -------------------------------------------------------------------------------- 203 (364)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CccccCccccccccccccCCCCCccccCCCCCCCCCCCCCCCCcHHHHHHHcChHHHHHHHHHhCCccccccccCCCchh
Q 004286 415 TSLTDHNVVTDTHKLSRNNGKNSEDRNEGGKTGSTIPDTVKRETPILIAAKNGITEIVEKILKSFPVAILDMNSEKKNVM 494 (763)
Q Consensus 415 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~G~tpLh~Aa~~g~~eiv~~LL~~~~~~~~~~d~~G~T~L 494 (763)
.+..|..|.||||+||..|+.++|++||+ .+.+++.+|.+|+|||
T Consensus 204 ----------------------------------~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~gad~~~~d~~g~tpL 248 (364)
T 3ljn_A 204 ----------------------------------LDYANKQGNSHLHWAILINWEDVAMRFVE-MGIDVNMEDNEHTVPL 248 (364)
T ss_dssp ----------------------------------TTCCCTTCCCTTHHHHTTTCHHHHHHHHT-TTCCTTCCCTTSCCHH
T ss_pred ----------------------------------ccccCCCCCcHHHHHHHcCCHHHHHHHHH-cCCCCCCCCCCCCCHH
Confidence 01145579999999999999999999999 5777899999999999
Q ss_pred HHHHHcCChHHHHHHHhccchhh--------hhhccccCCCCchhhhHhhcCC
Q 004286 495 LLAVENRQRHVYQLLLKTAIIQE--------TVFRKVDDQGNSALHLAATLGD 539 (763)
Q Consensus 495 H~A~~~~~~~iv~~Ll~~~~~~~--------~~~n~~D~~G~TpLH~Aa~~g~ 539 (763)
|+|+..|+.+++++|++.++... ......|..|+|||++|+..|+
T Consensus 249 ~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aa~~~~ 301 (364)
T 3ljn_A 249 YLSVRAAMVLLTKELLQKTDVFLIQACPYHNGTTVLPDRVVWLDFVPAAADPS 301 (364)
T ss_dssp HHHHHTCCHHHHHHHHHHSCHHHHHTCTTBSSSSBCGGGCCCCTTSCSSCCHH
T ss_pred HHHHHhChHHHHHHHHHcCCchhhhcCcccCcccccccccccccchhhhhccC
Confidence 99999999999999999986421 0112268889999999999876
No 13
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=1.3e-39 Score=338.37 Aligned_cols=261 Identities=17% Similarity=0.112 Sum_probs=196.4
Q ss_pred ccccCCCCChHHHHHHHcCCHHHHHHHHHHhhhhccccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCccCCCCCC
Q 004286 38 EARITRSGGTALHIAVSDGQEEIVEDLVRIIHEKQQLKVLKIGDERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHE 117 (763)
Q Consensus 38 ~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~ 117 (763)
++.+|.+|+||||+||..|+.++|++|++.|++. ..++.+|..|+||||+|+..|+.+++++|+++|++ ++.+|..
T Consensus 2 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~---~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~ 77 (282)
T 1oy3_D 2 FGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGH---EYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAG-VLVAERG 77 (282)
T ss_dssp CCCCCTTCCCHHHHHHHTTCHHHHHHHHHHHTTS---GGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-SSCCCTT
T ss_pred CCccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCc---ccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCC
Confidence 3567999999999999999999999999998431 23889999999999999999999999999999999 9999999
Q ss_pred CChHHHHHHHcCCHHHHHHHHHcCCCCCCC--------CccccCCCCChHHHHHHHcCChHHHHHHHHHhcccccccccc
Q 004286 118 NETPFFLAARHGHKDAFLCLHYLCASVDDG--------YNYSRRKNGETILHYAISGYYFVDLAFQIIHLYEKLVNFVNE 189 (763)
Q Consensus 118 g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~--------~~~~~d~~G~TpLh~A~~~g~~~~iv~~LL~~~~~~~~~~d~ 189 (763)
|.||||+|+..|+.+++++|+++|++.... ........+.++++.++..+.. .....++...+.+++..|.
T Consensus 78 g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 156 (282)
T 1oy3_D 78 GHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPE-NEEEPRDEDWRLQLEAENY 156 (282)
T ss_dssp SCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC------------------------------------CCCGGGGTTCCCT
T ss_pred CCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccc-hhhhhhhhhhhhcCCCcCC
Confidence 999999999999999999999999875411 1123445678899998888777 5555555557889999999
Q ss_pred CCCcHHHHHhcCCCCccCCchHHHHHHHHHcCCCCCccccccccccchhhhccccCCCCccHHHHHHHHHHHHHHHHHHH
Q 004286 190 RGVSPLHLLATKPNAFRSGSHLGLCTGIIYHCISVDKLQEETSYDQHLFTTIKKQTNYPENYETCLNFIRLLKTMVIVLF 269 (763)
Q Consensus 190 ~G~TpLh~A~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ll~~l~ 269 (763)
.|.||||+|+..|+ .+++++|+++|++++..+
T Consensus 157 ~g~t~L~~A~~~g~-------~~~v~~Ll~~g~~~~~~~----------------------------------------- 188 (282)
T 1oy3_D 157 DGHTPLHVAVIHKD-------AEMVRLLRDAGADLNKPE----------------------------------------- 188 (282)
T ss_dssp TSCCHHHHHHHTTC-------HHHHHHHHHHTCCTTCCC-----------------------------------------
T ss_pred CCcCHHHHHHHcCC-------HHHHHHHHHcCCCCCCCC-----------------------------------------
Confidence 99999999999985 699999999888776422
Q ss_pred hCCCCCCCCCCCCCCCCccCCCCCCCCCCCcccccccccCCccCCCCCCCchhhHHhhccchhhhhhccchhHHHHHHHH
Q 004286 270 NRGNTKKEPTPRDAEDPERSKGNDGTGDQGEESRHNIGAQGHQFFPPNYGTCFEFVKLVSKPMLVILGLGSTKIRKIRDE 349 (763)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~ 349 (763)
T Consensus 189 -------------------------------------------------------------------------------- 188 (282)
T 1oy3_D 189 -------------------------------------------------------------------------------- 188 (282)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HhhhccHHHHHHHHHhccCCceeccCCCCCCCCCCCCcccccCcccccccCCCCCCCCCCCCCCCCccccCccccccccc
Q 004286 350 KQKHTWSVQILDELLRRTSLYEYDYVGGKPLRRPSSQVEEDETIPYAIVDGGDTDADLEGDQQPDTSLTDHNVVTDTHKL 429 (763)
Q Consensus 350 ~~~~~~~~~iv~~Ll~~~~~~~~d~~G~tpL~~a~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~L~~~~~~~~~~~~ 429 (763)
T Consensus 189 -------------------------------------------------------------------------------- 188 (282)
T 1oy3_D 189 -------------------------------------------------------------------------------- 188 (282)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccCCCCCccccCCCCCCCCCCCCCCCCcHHHHHHHcChHHHHHHHHHhCCccccccccCCCchhHHHHHcCChHHHHHH
Q 004286 430 SRNNGKNSEDRNEGGKTGSTIPDTVKRETPILIAAKNGITEIVEKILKSFPVAILDMNSEKKNVMLLAVENRQRHVYQLL 509 (763)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~d~~G~tpLh~Aa~~g~~eiv~~LL~~~~~~~~~~d~~G~T~LH~A~~~~~~~iv~~L 509 (763)
+..|.||||+|+..|+.++|++||+. +.+++.+|..|+||||+|+.+|+.+++++|
T Consensus 189 -----------------------~~~g~tpL~~A~~~~~~~~v~~Ll~~-gad~~~~d~~g~tpL~~A~~~~~~~~v~~L 244 (282)
T 1oy3_D 189 -----------------------PTCGRTPLHLAVEAQAASVLELLLKA-GADPTARMYGGRTPLGSALLRPNPILARLL 244 (282)
T ss_dssp -----------------------TTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHTSSCHHHHHHH
T ss_pred -----------------------CCCCcCHHHHHHHcCCHHHHHHHHHc-CCCCcccccCCCCHHHHHHHcCCcHHHHHH
Confidence 12499999999999999999999994 778899999999999999999999999999
Q ss_pred HhccchhhhhhccccCCCCchhhhHhhcCC
Q 004286 510 LKTAIIQETVFRKVDDQGNSALHLAATLGD 539 (763)
Q Consensus 510 l~~~~~~~~~~n~~D~~G~TpLH~Aa~~g~ 539 (763)
+++|+ +++.+|.+|.|||++|....+
T Consensus 245 l~~ga----~~~~~~~~g~tpl~~a~~~~~ 270 (282)
T 1oy3_D 245 RAHGA----PEPEDGGDKLSPCSSSGSDSD 270 (282)
T ss_dssp HHTTC----CCCCCC---------------
T ss_pred HHcCC----CcCcCCCcccccccccCCccc
Confidence 99998 699999999999999998765
No 14
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=2.3e-39 Score=331.10 Aligned_cols=169 Identities=24% Similarity=0.232 Sum_probs=123.8
Q ss_pred cccccCCCCChHHHHHHHcC-------------CHHHHHHHHHHhhhhcccccc-ccCCCCCchHHHHHHHcCCHHHHHH
Q 004286 37 HEARITRSGGTALHIAVSDG-------------QEEIVEDLVRIIHEKQQLKVL-KIGDERGSTPLHIAAGLGNVSMCKC 102 (763)
Q Consensus 37 ~~~~~d~~g~TpLh~A~~~g-------------~~~~v~~Ll~~g~~~~~~~~~-~~~d~~g~TpLh~Aa~~g~~~~v~~ 102 (763)
++|.+|.+|+||||+|+..| +.+++++|++.|+ ++ +..|..|+||||+|+..|+.+++++
T Consensus 2 dvn~~d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~------~~~~~~d~~g~t~L~~A~~~g~~~~v~~ 75 (253)
T 1yyh_A 2 DVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGA------SLHNQTDRTGETALHLAARYSRSDAAKR 75 (253)
T ss_dssp --------------------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred CCCCCCCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccC------CcccccCCCCCcHHHHHHHcCCHHHHHH
Confidence 57788999999999999987 8999999999984 34 3468999999999999999999999
Q ss_pred HHhcCCCccCCCCCCCChHHHHHHHcCCHHHHHHHHHcCC-CCCCCCccccCCCCChHHHHHHHcCChHHHHHHHHHhcc
Q 004286 103 IATADPRLIGERNHENETPFFLAARHGHKDAFLCLHYLCA-SVDDGYNYSRRKNGETILHYAISGYYFVDLAFQIIHLYE 181 (763)
Q Consensus 103 Ll~~~~~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~ga-~~~~~~~~~~d~~G~TpLh~A~~~g~~~~iv~~LL~~~~ 181 (763)
|+++|++ ++.+|..|+||||+|+..|+.+++++|+++|+ +++ .+|..|.||||+|+..|+. +++++|++ .|
T Consensus 76 Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~-----~~~~~g~t~L~~A~~~~~~-~~v~~Ll~-~g 147 (253)
T 1yyh_A 76 LLEASAD-ANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLD-----ARMHDGTTPLILAARLAVE-GMLEDLIN-SH 147 (253)
T ss_dssp HHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTT-----CCCTTCCCHHHHHHHHTCS-SHHHHHHH-TT
T ss_pred HHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcc-----ccCCCCCcHHHHHHHcChH-HHHHHHHH-cC
Confidence 9999998 99999999999999999999999999999987 777 8999999999999999999 99999999 59
Q ss_pred ccccccccCCCcHHHHHhcCCCCccCCchHHHHHHHHHcCCCCCc
Q 004286 182 KLVNFVNERGVSPLHLLATKPNAFRSGSHLGLCTGIIYHCISVDK 226 (763)
Q Consensus 182 ~~~~~~d~~G~TpLh~A~~~~~~~~~~~~~~iv~~Ll~~ga~~~~ 226 (763)
++++.+|.+|.||||+|+..++ .+++++|+++|++++.
T Consensus 148 ~~~~~~d~~g~t~L~~A~~~~~-------~~~v~~Ll~~ga~~~~ 185 (253)
T 1yyh_A 148 ADVNAVDDLGKSALHWAAAVNN-------VDAAVVLLKNGANKDM 185 (253)
T ss_dssp CCTTCBCTTSCBHHHHHHHHTC-------HHHHHHHHHTTCCTTC
T ss_pred CCCCCcCCCCCCHHHHHHHcCC-------HHHHHHHHHcCCCCCC
Confidence 9999999999999999999885 6888888888877763
No 15
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=1.6e-38 Score=339.59 Aligned_cols=283 Identities=19% Similarity=0.154 Sum_probs=242.7
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHHhhhhccccccccCCC-CCchHHHHHHHcCCHHHHHHHHhcCCCccCCCCCCCCh
Q 004286 42 TRSGGTALHIAVSDGQEEIVEDLVRIIHEKQQLKVLKIGDE-RGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENET 120 (763)
Q Consensus 42 d~~g~TpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~d~-~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~T 120 (763)
+.+|.||||.||+.|+.++|++||++| +++|.+|. .|+||||+|+..|+.++|++|+++|++ ++.++..+.+
T Consensus 22 ~~~~~t~L~~Av~~g~~~~V~~LL~~G------advn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~-~~~~~~~~~~ 94 (337)
T 4g8k_A 22 AVEDNHLLIKAVQNEDVDLVQQLLEGG------ANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGAD-PVLRKKNGAT 94 (337)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHT------CCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCC
T ss_pred CCCCChHHHHHHHcCCHHHHHHHHHCC------CCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCc-hhhhccCCCc
Confidence 445889999999999999999999998 67888875 599999999999999999999999999 9999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCCCccccCCCCChHHHHHHHcCChHHHHHHHHHhcccccccc----------ccC
Q 004286 121 PFFLAARHGHKDAFLCLHYLCASVDDGYNYSRRKNGETILHYAISGYYFVDLAFQIIHLYEKLVNFV----------NER 190 (763)
Q Consensus 121 pLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~d~~G~TpLh~A~~~g~~~~iv~~LL~~~~~~~~~~----------d~~ 190 (763)
|++.++..++..++..+++.+++++ .+|..|.||||+|+..|+. +++++|++ .|++++.. +..
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~d~~g~t~l~~A~~~~~~-~~~~~ll~-~ga~~~~~~~~~~~~~~~~~~ 167 (337)
T 4g8k_A 95 PFILAAIAGSVKLLKLFLSKGADVN-----ECDFYGFTAFMEAAVYGKV-KALKFLYK-RGANVNLRRKTKEDQERLRKG 167 (337)
T ss_dssp HHHHHHHHTCHHHHHHHHTTTCCTT-----CBCTTCCBHHHHHHHTTCH-HHHHHHHH-TTCCTTCCCCCC-----CTTC
T ss_pred hhHHHHhcccchhhHHhhhccchhh-----hhccCCCCHHHHHHHcCcH-HHHHHHHH-cCCCcchhhccccccccccCC
Confidence 9999999999999999999999998 8999999999999999999 99999999 48877653 557
Q ss_pred CCcHHHHHhcCCCCccCCchHHHHHHHHH-cCCCCCccccccccccchhhhccccCCCCccHHHHHHHHHHHHHHHHHHH
Q 004286 191 GVSPLHLLATKPNAFRSGSHLGLCTGIIY-HCISVDKLQEETSYDQHLFTTIKKQTNYPENYETCLNFIRLLKTMVIVLF 269 (763)
Q Consensus 191 G~TpLh~A~~~~~~~~~~~~~~iv~~Ll~-~ga~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ll~~l~ 269 (763)
|.||||+|+..|+ .+++++|++ .|++++..+.. +.+|+++.....
T Consensus 168 g~T~L~~A~~~g~-------~~~v~~LL~~~gad~n~~d~~--------------g~t~l~~~~~~~------------- 213 (337)
T 4g8k_A 168 GATALMDAAEKGH-------VEVLKILLDEMGADVNACDNM--------------GRNALIHALLSS------------- 213 (337)
T ss_dssp SCCHHHHHHHHTC-------HHHHHHHHHHSCCCTTCCCTT--------------SCCHHHHHHHHS-------------
T ss_pred CCcHHHHHHHCCC-------HHHHHHHHhccCCCcCccCCC--------------CCcHHHHHHHHc-------------
Confidence 9999999999985 799999996 69999987743 344444432110
Q ss_pred hCCCCCCCCCCCCCCCCccCCCCCCCCCCCcccccccccCCccCCCCCCCchhhHHhhccchhhhhhccchhHHHHHHHH
Q 004286 270 NRGNTKKEPTPRDAEDPERSKGNDGTGDQGEESRHNIGAQGHQFFPPNYGTCFEFVKLVSKPMLVILGLGSTKIRKIRDE 349 (763)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~ 349 (763)
T Consensus 214 -------------------------------------------------------------------------------- 213 (337)
T 4g8k_A 214 -------------------------------------------------------------------------------- 213 (337)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HhhhccHHHHHHHHHhccCCceeccCCCCCCCCCCCCcccccCcccccccCCCCCCCCCCCCCCCCccccCccccccccc
Q 004286 350 KQKHTWSVQILDELLRRTSLYEYDYVGGKPLRRPSSQVEEDETIPYAIVDGGDTDADLEGDQQPDTSLTDHNVVTDTHKL 429 (763)
Q Consensus 350 ~~~~~~~~~iv~~Ll~~~~~~~~d~~G~tpL~~a~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~L~~~~~~~~~~~~ 429 (763)
......++++.|+++|++.
T Consensus 214 --~~~~~~~i~~lLl~~gad~----------------------------------------------------------- 232 (337)
T 4g8k_A 214 --DDSDVEAITHLLLDHGADV----------------------------------------------------------- 232 (337)
T ss_dssp --CTTTHHHHHHHHHHTTCCT-----------------------------------------------------------
T ss_pred --CcccHHHHHHHHHHCCCCC-----------------------------------------------------------
Confidence 0011125788888885432
Q ss_pred cccCCCCCccccCCCCCCCCCCCCCCCCcHHHHHHHcChHHHHHHHHHhCCccccccccCCCchhHHHHHcCChHHHHHH
Q 004286 430 SRNNGKNSEDRNEGGKTGSTIPDTVKRETPILIAAKNGITEIVEKILKSFPVAILDMNSEKKNVMLLAVENRQRHVYQLL 509 (763)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~d~~G~tpLh~Aa~~g~~eiv~~LL~~~~~~~~~~d~~G~T~LH~A~~~~~~~iv~~L 509 (763)
+.+|.+|+||||+|+..|+.++|+.|++..+.+++.+|.+|+||||+||++|+.++|++|
T Consensus 233 --------------------n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~L 292 (337)
T 4g8k_A 233 --------------------NVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELL 292 (337)
T ss_dssp --------------------TCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHH
T ss_pred --------------------CCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHH
Confidence 225668999999999999999999999987889999999999999999999999999999
Q ss_pred HhccchhhhhhccccCCCCchhhhHhhcCCCCC
Q 004286 510 LKTAIIQETVFRKVDDQGNSALHLAATLGDHKP 542 (763)
Q Consensus 510 l~~~~~~~~~~n~~D~~G~TpLH~Aa~~g~~~~ 542 (763)
+++|+ |.++.||||+|++.|+.++
T Consensus 293 l~~GA---------d~n~~~~L~~A~~~~~~~i 316 (337)
T 4g8k_A 293 CKRGA---------STDCGDLVMTARRNYDHSL 316 (337)
T ss_dssp HTTSC---------SSTTCCHHHHHHHTTCHHH
T ss_pred HHCCC---------CCCCCCHHHHHHHcCCHHH
Confidence 99997 3445679999999998443
No 16
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=1.2e-38 Score=325.70 Aligned_cols=224 Identities=20% Similarity=0.153 Sum_probs=170.6
Q ss_pred ccccCCCCCchHHHHHHHcC-------------CHHHHHHHHhcCCCccCCCCCCCChHHHHHHHcCCHHHHHHHHHcCC
Q 004286 76 VLKIGDERGSTPLHIAAGLG-------------NVSMCKCIATADPRLIGERNHENETPFFLAARHGHKDAFLCLHYLCA 142 (763)
Q Consensus 76 ~~~~~d~~g~TpLh~Aa~~g-------------~~~~v~~Ll~~~~~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~ga 142 (763)
++|.+|.+|+||||+|+..| +.++++.|++.|++..+..|..|+||||+|+..|+.+++++|+++|+
T Consensus 2 dvn~~d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~ 81 (253)
T 1yyh_A 2 DVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASA 81 (253)
T ss_dssp --------------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred CCCCCCCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCC
Confidence 57889999999999999987 89999999999999556679999999999999999999999999999
Q ss_pred CCCCCCccccCCCCChHHHHHHHcCChHHHHHHHHHhccccccccccCCCcHHHHHhcCCCCccCCchHHHHHHHHHcCC
Q 004286 143 SVDDGYNYSRRKNGETILHYAISGYYFVDLAFQIIHLYEKLVNFVNERGVSPLHLLATKPNAFRSGSHLGLCTGIIYHCI 222 (763)
Q Consensus 143 ~~~~~~~~~~d~~G~TpLh~A~~~g~~~~iv~~LL~~~~~~~~~~d~~G~TpLh~A~~~~~~~~~~~~~~iv~~Ll~~ga 222 (763)
+++ .+|..|+||||+|+..|+. +++++|++..+.+++..|..|.||||+|+..++ .+++++|+++|+
T Consensus 82 ~~~-----~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~-------~~~v~~Ll~~g~ 148 (253)
T 1yyh_A 82 DAN-----IQDNMGRTPLHAAVSADAQ-GVFQILIRNRATDLDARMHDGTTPLILAARLAV-------EGMLEDLINSHA 148 (253)
T ss_dssp CTT-----CCCTTSCCHHHHHHHHTCH-HHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTC-------SSHHHHHHHTTC
T ss_pred CCC-----CCCCCCCCHHHHHHHcCCH-HHHHHHHHcCCCCccccCCCCCcHHHHHHHcCh-------HHHHHHHHHcCC
Confidence 998 8999999999999999999 999999996555999999999999999999986 488888888877
Q ss_pred CCCccccccccccchhhhccccCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCccCCCCCCCCCCCccc
Q 004286 223 SVDKLQEETSYDQHLFTTIKKQTNYPENYETCLNFIRLLKTMVIVLFNRGNTKKEPTPRDAEDPERSKGNDGTGDQGEES 302 (763)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (763)
+++..
T Consensus 149 ~~~~~--------------------------------------------------------------------------- 153 (253)
T 1yyh_A 149 DVNAV--------------------------------------------------------------------------- 153 (253)
T ss_dssp CTTCB---------------------------------------------------------------------------
T ss_pred CCCCc---------------------------------------------------------------------------
Confidence 66532
Q ss_pred ccccccCCccCCCCCCCchhhHHhhccchhhhhhccchhHHHHHHHHHhhhccHHHHHHHHHhccCCceeccCCCCCCCC
Q 004286 303 RHNIGAQGHQFFPPNYGTCFEFVKLVSKPMLVILGLGSTKIRKIRDEKQKHTWSVQILDELLRRTSLYEYDYVGGKPLRR 382 (763)
Q Consensus 303 ~~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~iv~~Ll~~~~~~~~d~~G~tpL~~ 382 (763)
T Consensus 154 -------------------------------------------------------------------------------- 153 (253)
T 1yyh_A 154 -------------------------------------------------------------------------------- 153 (253)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCcccccCcccccccCCCCCCCCCCCCCCCCccccCccccccccccccCCCCCccccCCCCCCCCCCCCCCCCcHHHH
Q 004286 383 PSSQVEEDETIPYAIVDGGDTDADLEGDQQPDTSLTDHNVVTDTHKLSRNNGKNSEDRNEGGKTGSTIPDTVKRETPILI 462 (763)
Q Consensus 383 a~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~G~tpLh~ 462 (763)
|..|.||||+
T Consensus 154 ----------------------------------------------------------------------d~~g~t~L~~ 163 (253)
T 1yyh_A 154 ----------------------------------------------------------------------DDLGKSALHW 163 (253)
T ss_dssp ----------------------------------------------------------------------CTTSCBHHHH
T ss_pred ----------------------------------------------------------------------CCCCCCHHHH
Confidence 3369999999
Q ss_pred HHHcChHHHHHHHHHhCCccccccccCCCchhHHHHHcCChHHHHHHHhccchhhhhhccccCCCCchhhhHhhcCCCCC
Q 004286 463 AAKNGITEIVEKILKSFPVAILDMNSEKKNVMLLAVENRQRHVYQLLLKTAIIQETVFRKVDDQGNSALHLAATLGDHKP 542 (763)
Q Consensus 463 Aa~~g~~eiv~~LL~~~~~~~~~~d~~G~T~LH~A~~~~~~~iv~~Ll~~~~~~~~~~n~~D~~G~TpLH~Aa~~g~~~~ 542 (763)
|+..|+.++|++|++ .+.+++.+|..|+||||+|+.+|+.+++++|++.++ +++.+|..|+||||+|++.|+.++
T Consensus 164 A~~~~~~~~v~~Ll~-~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga----~~~~~d~~g~tpl~~A~~~g~~~i 238 (253)
T 1yyh_A 164 AAAVNNVDAAVVLLK-NGANKDMQNNREETPLFLAAREGSYETAKVLLDHFA----NRDITDHMDRLPRDIAQERMHHDI 238 (253)
T ss_dssp HHHHTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC----CTTCCCTTCCCHHHHHHHTTCHHH
T ss_pred HHHcCCHHHHHHHHH-cCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCC----CccccccCCCCHHHHHHHcCCHHH
Confidence 999999999999999 577788999999999999999999999999999998 689999999999999999999443
No 17
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=2.3e-38 Score=325.30 Aligned_cols=192 Identities=18% Similarity=0.109 Sum_probs=178.9
Q ss_pred hhHHHHHHHHcCCHHHHHHHHccCCCccccccCCCCChHHHHHHHcCCHHHHHHHHHHhhhhccccccccCCCCCchHHH
Q 004286 10 LKKGLFKSAMKGKWNEVVENYGKDDRIHEARITRSGGTALHIAVSDGQEEIVEDLVRIIHEKQQLKVLKIGDERGSTPLH 89 (763)
Q Consensus 10 ~~~~L~~aa~~g~~~~v~~lL~~~~~~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~d~~g~TpLh 89 (763)
..+|||.||..|+.+.++.++.. +++++..|..|+||||+|+..|+.+++++|+++| ++++.+|..|+||||
T Consensus 3 g~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g------~~~~~~~~~g~t~L~ 74 (261)
T 2xai_A 3 DWSPMHEAAIHGHQLSLRNLISQ--GWAVNIITADHVSPLHEACLGGHLSCVKILLKHG------AQVNGVTADWHTPLF 74 (261)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHT--TCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTT------CCTTCCCTTSCCHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHC--CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCC------CCCCCCCCCCCCHHH
Confidence 36899999999999999999988 8899999999999999999999999999999998 779999999999999
Q ss_pred HHHHcCCHHHHHHHHhcCCCccCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCccccCCCCChHHHHHHHcCCh
Q 004286 90 IAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAARHGHKDAFLCLHYLCASVDDGYNYSRRKNGETILHYAISGYYF 169 (763)
Q Consensus 90 ~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~d~~G~TpLh~A~~~g~~ 169 (763)
+|+..|+.+++++|+++|++ ++. +.+|.||||+|+..|+.+++++|+++|++++ .+|..|.||||+|+..|+.
T Consensus 75 ~A~~~~~~~~v~~Ll~~g~~-~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-----~~~~~g~t~L~~A~~~~~~ 147 (261)
T 2xai_A 75 NACVSGSWDCVNLLLQHGAS-VQP-ESDLASPIHEAARRGHVECVNSLIAYGGNID-----HKISHLGTPLYLACENQQR 147 (261)
T ss_dssp HHHHHTCHHHHHHHHHTTCC-SSC-SCTTCCHHHHHHHTTCHHHHHHHHHTTCCTT-----CCBTTTBCHHHHHHHTTCH
T ss_pred HHHHcCCHHHHHHHHHCCCC-CCC-CCCCCCHHHHHHHcCcHHHHHHHHHcCCCCC-----cCCCCCCCHHHHHHHhCCH
Confidence 99999999999999999998 664 4569999999999999999999999999998 8999999999999999999
Q ss_pred HHHHHHHHHhccccccccccCCCcHHHHHhcCCCCccCCchHHHHHHHHHcCCCCCc
Q 004286 170 VDLAFQIIHLYEKLVNFVNERGVSPLHLLATKPNAFRSGSHLGLCTGIIYHCISVDK 226 (763)
Q Consensus 170 ~~iv~~LL~~~~~~~~~~d~~G~TpLh~A~~~~~~~~~~~~~~iv~~Ll~~ga~~~~ 226 (763)
+++++|++. |++++. |..|.||||+|+..++ .+++++|+++|++++.
T Consensus 148 -~~v~~Ll~~-g~~~~~-~~~g~t~Lh~A~~~~~-------~~~v~~Ll~~gad~~~ 194 (261)
T 2xai_A 148 -ACVKKLLES-GADVNQ-GKGQDSPLHAVARTAS-------EELACLLMDFGADTQA 194 (261)
T ss_dssp -HHHHHHHHH-TCCTTC-CBTTBCHHHHHHHHTC-------HHHHHHHHHTTCCTTC
T ss_pred -HHHHHHHHc-CCCCCC-CCCCCChHHHHHHcCC-------HHHHHHHHHcCCCCCC
Confidence 999999995 999995 8999999999999985 6899999998888764
No 18
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=2.4e-38 Score=320.80 Aligned_cols=175 Identities=24% Similarity=0.254 Sum_probs=151.1
Q ss_pred cccCCCCChHHHHHHHcCCHHHHHHHHHHhhhhccccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCccCCCCCCC
Q 004286 39 ARITRSGGTALHIAVSDGQEEIVEDLVRIIHEKQQLKVLKIGDERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHEN 118 (763)
Q Consensus 39 ~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g 118 (763)
+.+|.+|+||||+||..|+.+++++|++...+ .+.+++.+|..|+||||+|+..|+.+++++|+++|++ ++.+|..|
T Consensus 3 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~--~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g 79 (241)
T 1k1a_A 3 TRADEDGDTPLHIAVVQGNLPAVHRLVNLFQQ--GGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGAS-PMALDRHG 79 (241)
T ss_dssp ----CTTCCHHHHHHHTTCHHHHHHHHHHHHH--TTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTS
T ss_pred cccCCCCCcHHHHHHHcCCHHHHHHHHHHHHh--cCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCC-ccccCCCC
Confidence 46789999999999999999999999984321 2367899999999999999999999999999999998 89999999
Q ss_pred ChHHHHHHHcCCHHHHHHHHHcCCCCCCCCccccCCCCChHHHHHHHcCChHHHHHHHHHhccccccccc-cCCCcHHHH
Q 004286 119 ETPFFLAARHGHKDAFLCLHYLCASVDDGYNYSRRKNGETILHYAISGYYFVDLAFQIIHLYEKLVNFVN-ERGVSPLHL 197 (763)
Q Consensus 119 ~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~d~~G~TpLh~A~~~g~~~~iv~~LL~~~~~~~~~~d-~~G~TpLh~ 197 (763)
.||||+|+..|+.+++++|+++++... .+++..|..|.||||+|+..|+. +++++|++ .|++++..+ ..|.||||+
T Consensus 80 ~t~l~~A~~~~~~~~~~~Ll~~~~~~~-~~~~~~~~~g~t~L~~A~~~~~~-~~~~~Ll~-~g~~~~~~~~~~g~t~L~~ 156 (241)
T 1k1a_A 80 QTAAHLACEHRSPTCLRALLDSAAPGT-LDLEARNYDGLTALHVAVNTECQ-ETVQLLLE-RGADIDAVDIKSGRSPLIH 156 (241)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHSCTTS-CCTTCCCTTSCCHHHHHHHHTCH-HHHHHHHH-TTCCTTCCCTTTCCCHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCcc-ccccccCcCCCcHHHHHHHcCCH-HHHHHHHH-cCCCcccccccCCCcHHHH
Confidence 999999999999999999999998322 22338899999999999999999 99999999 488999988 889999999
Q ss_pred HhcCCCCccCCchHHHHHHHHHcCCCCCc
Q 004286 198 LATKPNAFRSGSHLGLCTGIIYHCISVDK 226 (763)
Q Consensus 198 A~~~~~~~~~~~~~~iv~~Ll~~ga~~~~ 226 (763)
|+..++ .+++++|+++|++++.
T Consensus 157 A~~~~~-------~~~v~~Ll~~g~~~~~ 178 (241)
T 1k1a_A 157 AVENNS-------LSMVQLLLQHGANVNA 178 (241)
T ss_dssp HHHTTC-------HHHHHHHHHTTCCTTC
T ss_pred HHHcCC-------HHHHHHHHHcCCCCCC
Confidence 999985 6888888888877763
No 19
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=6.6e-39 Score=347.11 Aligned_cols=196 Identities=17% Similarity=0.128 Sum_probs=164.9
Q ss_pred hhHHHHHHHHcCCHHHHHHHHccCCCccccccC-CCCChHHHHHHHcCCHHHHHHHHHHhhhh--ccccccccCCCCCch
Q 004286 10 LKKGLFKSAMKGKWNEVVENYGKDDRIHEARIT-RSGGTALHIAVSDGQEEIVEDLVRIIHEK--QQLKVLKIGDERGST 86 (763)
Q Consensus 10 ~~~~L~~aa~~g~~~~v~~lL~~~~~~~~~~~d-~~g~TpLh~A~~~g~~~~v~~Ll~~g~~~--~~~~~~~~~d~~g~T 86 (763)
..++||.||..+. +.+ .+|.. .+++..| ..|+||||+||..|+.+++++|+...... ..++++|.+|..|+|
T Consensus 94 g~t~L~~Aa~~~~-~~~-~~L~~---~~~n~~d~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~~d~~g~T 168 (373)
T 2fo1_E 94 SPIKLHTEAAGSY-AIT-EPITR---ESVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENT 168 (373)
T ss_dssp CCCHHHHHHHSSS-CCC-SCCST---TTTTTCCCSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCCTTSCC
T ss_pred CccHHHHHhcCCc-hHH-HHhcc---ccccccCCcCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcCCCCCCCC
Confidence 3678999998554 433 33332 4667777 79999999999999999888887321100 122789999999999
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCccCCCCCCCChHHHHHHHcCCHHHHHHHHHcC---CCCCCCCccccCCCCChHHHHH
Q 004286 87 PLHIAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAARHGHKDAFLCLHYLC---ASVDDGYNYSRRKNGETILHYA 163 (763)
Q Consensus 87 pLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~g---a~~~~~~~~~~d~~G~TpLh~A 163 (763)
|||+|+..|+.++|++|+++|++ ++.+|..|.||||+|+..|+.+++++|++++ ++++ ..|..|.||||+|
T Consensus 169 pL~~A~~~g~~~iv~~Ll~~ga~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~-----~~d~~g~t~L~~A 242 (373)
T 2fo1_E 169 PLMLAVLARRRRLVAYLMKAGAD-PTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIE-----ELDRNGMTALMIV 242 (373)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCC-SCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTS-----CCCTTSCCHHHHH
T ss_pred HHHHHHHcChHHHHHHHHHCCCC-CcccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChh-----hcCCCCCCHHHHH
Confidence 99999999999999999999999 9999999999999999999999999999998 7887 8999999999999
Q ss_pred HHcC---ChHHHHHHHHHhccccccc--------cccCCCcHHHHHhcCCCCccCCchHHHHHHHHHcC-CCCC
Q 004286 164 ISGY---YFVDLAFQIIHLYEKLVNF--------VNERGVSPLHLLATKPNAFRSGSHLGLCTGIIYHC-ISVD 225 (763)
Q Consensus 164 ~~~g---~~~~iv~~LL~~~~~~~~~--------~d~~G~TpLh~A~~~~~~~~~~~~~~iv~~Ll~~g-a~~~ 225 (763)
+..+ +. +++++|++. |++++. .|..|.||||+|+..|+ .+++++|+++| ++++
T Consensus 243 ~~~~~~~~~-~~v~~Ll~~-g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~-------~~~v~~Ll~~~~~~~n 307 (373)
T 2fo1_E 243 AHNEGRDQV-ASAKLLVEK-GAKVDYDGAARKDSEKYKGRTALHYAAQVSN-------MPIVKYLVGEKGSNKD 307 (373)
T ss_dssp HHSCSTTHH-HHHHHHHHH-TCCSSCCSGGGTSSSSCCCCCTHHHHHSSCC-------HHHHHHHHHHSCCCTT
T ss_pred HHhCCcchH-HHHHHHHHC-CCCcccccccccCcccccCCCHHHHHHHhCC-------HHHHHHHHHhcCCCcc
Confidence 9998 78 999999995 888876 67799999999999985 68888888765 5554
No 20
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=8.8e-38 Score=315.96 Aligned_cols=136 Identities=23% Similarity=0.339 Sum_probs=100.2
Q ss_pred ccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCccCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCccccCCC
Q 004286 76 VLKIGDERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAARHGHKDAFLCLHYLCASVDDGYNYSRRKN 155 (763)
Q Consensus 76 ~~~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~d~~ 155 (763)
+++.+|.+|.||||+|+..|+.+++++|+++|++ ++..+..|.||||+|+..|+.+++++|+++|++++ .+|..
T Consensus 3 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-----~~~~~ 76 (237)
T 3b7b_A 3 NFKMEHQNKRSPLHAAAEAGHVDICHMLVQAGAN-IDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVD-----PKDAE 76 (237)
T ss_dssp CCCCSSCCSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCC-----CCCTT
T ss_pred CcccccCCCCCHHHHHHHcCcHHHHHHHHHcCCC-cCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCC-----CCCCC
Confidence 4666777777777777777777777777777776 77777777777777777777777777777777776 67777
Q ss_pred CChHHHHHHHcCChHHHHHHHHHhccccccccccCCCcHHHHHhcCCCCccCCchHHHHHHHHHcCCCCC
Q 004286 156 GETILHYAISGYYFVDLAFQIIHLYEKLVNFVNERGVSPLHLLATKPNAFRSGSHLGLCTGIIYHCISVD 225 (763)
Q Consensus 156 G~TpLh~A~~~g~~~~iv~~LL~~~~~~~~~~d~~G~TpLh~A~~~~~~~~~~~~~~iv~~Ll~~ga~~~ 225 (763)
|.||||+|+..|+. +++++|++..+.+++..|..|.||||+|+..++ .+++++|+++|++++
T Consensus 77 g~t~L~~A~~~~~~-~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~-------~~~~~~Ll~~g~~~~ 138 (237)
T 3b7b_A 77 GSTCLHLAAKKGHY-EVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKH-------VDLVKLLLSKGSDIN 138 (237)
T ss_dssp SCCHHHHHHHTTCH-HHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTC-------HHHHHHHHHTTCCTT
T ss_pred CCcHHHHHHHcCCH-HHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCC-------HHHHHHHHHCCCCCC
Confidence 77777777777777 777777775446777777777777777777764 566666666665554
No 21
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=2.4e-38 Score=341.93 Aligned_cols=193 Identities=19% Similarity=0.157 Sum_probs=177.5
Q ss_pred hhhHHHHHHHHcCCHHHHHHHHccCCCccccccCCCCChHHHHHHHcCCHHHHHHHHHHhhhhccccccccCCCCCchHH
Q 004286 9 QLKKGLFKSAMKGKWNEVVENYGKDDRIHEARITRSGGTALHIAVSDGQEEIVEDLVRIIHEKQQLKVLKIGDERGSTPL 88 (763)
Q Consensus 9 ~~~~~L~~aa~~g~~~~v~~lL~~~~~~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~d~~g~TpL 88 (763)
...++||.||..|+.+.|+.||.. +++++..|..|+||||+||..|+.++|++|+++|+ +..+.+|.|||
T Consensus 19 ~g~t~L~~Aa~~g~~~~v~~Ll~~--g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~--------~~~~~~g~t~L 88 (364)
T 3ljn_A 19 ENMEKIHVAARKGQTDEVRRLIET--GVSPTIQNRFGCTALHLACKFGCVDTAKYLASVGE--------VHSLWHGQKPI 88 (364)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHT--TCCTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCC--------CCCCBTTBCHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHc--CCCccccCCCCCcHHHHHHHcCCHHHHHHHHHCCC--------CccccCCCCHH
Confidence 357899999999999999999988 89999999999999999999999999999999983 33345899999
Q ss_pred HHHHHcCCHHHHHHHHhc----CCCccCC-----------------CCCCCChHHHHHHHcC--CHHHHHHHHHcCCCCC
Q 004286 89 HIAAGLGNVSMCKCIATA----DPRLIGE-----------------RNHENETPFFLAARHG--HKDAFLCLHYLCASVD 145 (763)
Q Consensus 89 h~Aa~~g~~~~v~~Ll~~----~~~~~~~-----------------~~~~g~TpLh~A~~~g--~~~~v~~Ll~~ga~~~ 145 (763)
|+|+..|+.+++++|+++ +.+ ++. +|..|.||||+|+..| +.+++++|+++|++++
T Consensus 89 ~~A~~~g~~~~v~~Ll~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~ 167 (364)
T 3ljn_A 89 HLAVMANKTDLVVALVEGAKERGQM-PESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPT 167 (364)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHTCC-HHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTT
T ss_pred HHHHHcCCHHHHHHHHHhccccCCC-HHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCc
Confidence 999999999999999998 766 555 8889999999999999 9999999999999999
Q ss_pred CCCccccCCCCChHHHHHHHcCChHHHHHHHHHhcccc-----ccccccCCCcHHHHHhcCCCCccCCchHHHHHHHHHc
Q 004286 146 DGYNYSRRKNGETILHYAISGYYFVDLAFQIIHLYEKL-----VNFVNERGVSPLHLLATKPNAFRSGSHLGLCTGIIYH 220 (763)
Q Consensus 146 ~~~~~~~d~~G~TpLh~A~~~g~~~~iv~~LL~~~~~~-----~~~~d~~G~TpLh~A~~~~~~~~~~~~~~iv~~Ll~~ 220 (763)
.+|..|.||||+|+..|+. +++++|++. +++ ++..|..|.||||+|+..|+ .+++++|+++
T Consensus 168 -----~~d~~g~t~L~~A~~~g~~-~~v~~Ll~~-g~~~~~~~~~~~~~~g~t~L~~A~~~g~-------~~~v~~Ll~~ 233 (364)
T 3ljn_A 168 -----AKDKADETPLMRAMEFRNR-EALDLMMDT-VPSKSSLRLDYANKQGNSHLHWAILINW-------EDVAMRFVEM 233 (364)
T ss_dssp -----CCCTTSCCHHHHHHHTTCH-HHHHHHHHH-CSCSSSCCTTCCCTTCCCTTHHHHTTTC-------HHHHHHHHTT
T ss_pred -----ccCCCCCCHHHHHHHcCCH-HHHHHHHhc-ccccccccccccCCCCCcHHHHHHHcCC-------HHHHHHHHHc
Confidence 8999999999999999999 999999995 777 99999999999999999985 6999999998
Q ss_pred CCCCCc
Q 004286 221 CISVDK 226 (763)
Q Consensus 221 ga~~~~ 226 (763)
|++++.
T Consensus 234 gad~~~ 239 (364)
T 3ljn_A 234 GIDVNM 239 (364)
T ss_dssp TCCTTC
T ss_pred CCCCCC
Confidence 888764
No 22
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=1.5e-37 Score=314.34 Aligned_cols=170 Identities=19% Similarity=0.182 Sum_probs=158.2
Q ss_pred ccccccCCCCChHHHHHHHcCCHHHHHHHHHHhhhhccccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCccCCCC
Q 004286 36 IHEARITRSGGTALHIAVSDGQEEIVEDLVRIIHEKQQLKVLKIGDERGSTPLHIAAGLGNVSMCKCIATADPRLIGERN 115 (763)
Q Consensus 36 ~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~ 115 (763)
.+++..|.+|+||||+||..|+.+++++|+++| ++++..|..|.||||+|+..|+.+++++|+++|++ ++.++
T Consensus 2 ~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g------~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~ 74 (237)
T 3b7b_A 2 MNFKMEHQNKRSPLHAAAEAGHVDICHMLVQAG------ANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGAL-VDPKD 74 (237)
T ss_dssp CCCCCSSCCSCCHHHHHHHHTCHHHHHHHHHTT------CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCC-CCCCC
T ss_pred CCcccccCCCCCHHHHHHHcCcHHHHHHHHHcC------CCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCC-CCCCC
Confidence 456778999999999999999999999999998 67889999999999999999999999999999998 89999
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHHcC-CCCCCCCccccCCCCChHHHHHHHcCChHHHHHHHHHhccccccccccCCCcH
Q 004286 116 HENETPFFLAARHGHKDAFLCLHYLC-ASVDDGYNYSRRKNGETILHYAISGYYFVDLAFQIIHLYEKLVNFVNERGVSP 194 (763)
Q Consensus 116 ~~g~TpLh~A~~~g~~~~v~~Ll~~g-a~~~~~~~~~~d~~G~TpLh~A~~~g~~~~iv~~LL~~~~~~~~~~d~~G~Tp 194 (763)
..|.||||+|+..|+.+++++|+++| .+++ ..|..|.||||+|+..|+. +++++|++ .|++++.+|..|.||
T Consensus 75 ~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~-----~~~~~g~t~L~~A~~~~~~-~~~~~Ll~-~g~~~~~~~~~g~t~ 147 (237)
T 3b7b_A 75 AEGSTCLHLAAKKGHYEVVQYLLSNGQMDVN-----CQDDGGWTPMIWATEYKHV-DLVKLLLS-KGSDINIRDNEENIC 147 (237)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHTTTCCCTT-----CCCTTSCCHHHHHHHTTCH-HHHHHHHH-TTCCTTCCCTTSCCH
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHhCCCCCcc-----cCCCCCCCHHHHHHHcCCH-HHHHHHHH-CCCCCCccCCCCCCH
Confidence 99999999999999999999999998 7777 8999999999999999999 99999999 599999999999999
Q ss_pred HHHHhcCCCCccCCchHHHHHHHHHcCCCCCc
Q 004286 195 LHLLATKPNAFRSGSHLGLCTGIIYHCISVDK 226 (763)
Q Consensus 195 Lh~A~~~~~~~~~~~~~~iv~~Ll~~ga~~~~ 226 (763)
||+|+..++ .+++++|+++|++++.
T Consensus 148 L~~A~~~~~-------~~~~~~Ll~~g~~~~~ 172 (237)
T 3b7b_A 148 LHWAAFSGC-------VDIAEILLAAKCDLHA 172 (237)
T ss_dssp HHHHHHHCC-------HHHHHHHHTTTCCTTC
T ss_pred HHHHHHCCC-------HHHHHHHHHcCCCCCC
Confidence 999999985 6888888888776653
No 23
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=5.9e-38 Score=329.12 Aligned_cols=81 Identities=15% Similarity=0.192 Sum_probs=75.0
Q ss_pred CCCCCCcHHHHHHHcChHHHHHHHHHhCCccccccccCCCchhHHHHHcCChHHHHHHHhccchhhhhhccccCCCCchh
Q 004286 452 DTVKRETPILIAAKNGITEIVEKILKSFPVAILDMNSEKKNVMLLAVENRQRHVYQLLLKTAIIQETVFRKVDDQGNSAL 531 (763)
Q Consensus 452 ~d~~G~tpLh~Aa~~g~~eiv~~LL~~~~~~~~~~d~~G~T~LH~A~~~~~~~iv~~Ll~~~~~~~~~~n~~D~~G~TpL 531 (763)
.+..|.||||+||..|+.++|++|++ .+.+++.+|.+|+||||+|+.+|+.+++++|++.++ +++.+|..|+|||
T Consensus 195 ~~~~g~t~L~~A~~~g~~~~v~~Ll~-~g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga----d~~~~d~~g~t~l 269 (299)
T 1s70_B 195 HAKSGGTALHVAAAKGYTEVLKLLIQ-ARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLC----DMEAVNKVGQTAF 269 (299)
T ss_dssp CTTTCCCHHHHHHHHTCHHHHHHHHT-TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTC----CTTCCCTTSCCTT
T ss_pred hcCCCCCHHHHHHHCCcHHHHHHHHH-cCCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCC----CCCCcCCCCCCHH
Confidence 35579999999999999999999998 567789999999999999999999999999999998 6899999999999
Q ss_pred hhHhhc
Q 004286 532 HLAATL 537 (763)
Q Consensus 532 H~Aa~~ 537 (763)
|+|++.
T Consensus 270 ~~A~~~ 275 (299)
T 1s70_B 270 DVADED 275 (299)
T ss_dssp TSCCSG
T ss_pred HHHHHH
Confidence 999753
No 24
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=4.1e-38 Score=324.00 Aligned_cols=172 Identities=19% Similarity=0.190 Sum_probs=126.0
Q ss_pred ccCCCCChHHHHHHHcCCHHHHHHHHHHhhhhc--cccccccCCCCCchHHHHHHHcCCH-HHHHHHHhcCCCccCCCCC
Q 004286 40 RITRSGGTALHIAVSDGQEEIVEDLVRIIHEKQ--QLKVLKIGDERGSTPLHIAAGLGNV-SMCKCIATADPRLIGERNH 116 (763)
Q Consensus 40 ~~d~~g~TpLh~A~~~g~~~~v~~Ll~~g~~~~--~~~~~~~~d~~g~TpLh~Aa~~g~~-~~v~~Ll~~~~~~~~~~~~ 116 (763)
.+|..+.|||+.||..|+.++|++||+.|++.. ....++..|..|.||||+|+..++. .+++.|++.|++ +|.+|.
T Consensus 6 kkd~~~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gad-vn~~d~ 84 (269)
T 4b93_B 6 KKDYREVEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLG-VNVTSQ 84 (269)
T ss_dssp -CCCHHHHHHHHHHHTTCHHHHHHHHTCC----------------------------------------CCCC-TTCCCT
T ss_pred ccCccchhHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCC-CCCcCC
Confidence 457788999999999999999999999886532 2234677888999999999988875 488999999999 999999
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCccccCCCCChHHHHHHHcCChHHHHHHHHHhccccccccccCCCcHHH
Q 004286 117 ENETPFFLAARHGHKDAFLCLHYLCASVDDGYNYSRRKNGETILHYAISGYYFVDLAFQIIHLYEKLVNFVNERGVSPLH 196 (763)
Q Consensus 117 ~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~d~~G~TpLh~A~~~g~~~~iv~~LL~~~~~~~~~~d~~G~TpLh 196 (763)
+|+||||+|+..|+.+++++|++.|++++ .++.+|.||+|+|+..++. +++++|++ .|++++.+|..|.||||
T Consensus 85 ~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~-----~~~~~g~t~l~~a~~~~~~-~~~~~Ll~-~g~~~n~~d~~g~TpL~ 157 (269)
T 4b93_B 85 DGSSPLHVAALHGRADLIPLLLKHGANAG-----ARNADQAVPLHLACQQGHF-QVVKCLLD-SNAKPNKKDLSGNTPLI 157 (269)
T ss_dssp TSCCHHHHHHHTTCTTHHHHHHHTTCCTT-----CCCTTCCCHHHHHHHHTCH-HHHHHHHH-TTCCSCCCCTTCCCHHH
T ss_pred CCCCHHHHHHHcCcHHHHHHHHhcCCCcC-----ccCCCCCCccccccccChH-HHHHHHHH-CCCCCCCCCCCCCCHHH
Confidence 99999999999999999999999999998 8999999999999999999 99999999 59999999999999999
Q ss_pred HHhcCCCCccCCchHHHHHHHHHcCCCCCc
Q 004286 197 LLATKPNAFRSGSHLGLCTGIIYHCISVDK 226 (763)
Q Consensus 197 ~A~~~~~~~~~~~~~~iv~~Ll~~ga~~~~ 226 (763)
+|+..|+ .+++++|+++|+++|.
T Consensus 158 ~A~~~g~-------~~~v~~Ll~~gadvn~ 180 (269)
T 4b93_B 158 YACSGGH-------HELVALLLQHGASINA 180 (269)
T ss_dssp HHHHTTC-------GGGHHHHHHTTCCTTC
T ss_pred HHHHCCC-------HHHHHHHHHCCCCCCc
Confidence 9999986 5889999888887764
No 25
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=6.4e-37 Score=308.30 Aligned_cols=165 Identities=18% Similarity=0.225 Sum_probs=149.9
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHHhhhhccccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCccCCCCCCCChH
Q 004286 42 TRSGGTALHIAVSDGQEEIVEDLVRIIHEKQQLKVLKIGDERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETP 121 (763)
Q Consensus 42 d~~g~TpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~Tp 121 (763)
+..+.||||.|+..|+.+.++.|++.+. ..++.+|..|+||||+|+..|+.+++++|+++|++ ++.+|..|+||
T Consensus 3 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~-----~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~ 76 (231)
T 3aji_A 3 GCVSNIMICNLAYSGKLDELKERILADK-----SLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVP-VNDKDDAGWSP 76 (231)
T ss_dssp CCCSSSHHHHHHHHTCHHHHHHHHHHCG-----GGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-SCCCCTTSCCH
T ss_pred CccccchHHHHHHhCCHHHHHHHHHhch-----hhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCC-CCCcCCCCCCH
Confidence 3568899999999999999999999863 45778899999999999999999999999999998 89999999999
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCCCccccCCCCChHHHHHHHcCChHHHHHHHHHhccccccccccCCCcHHHHHhcC
Q 004286 122 FFLAARHGHKDAFLCLHYLCASVDDGYNYSRRKNGETILHYAISGYYFVDLAFQIIHLYEKLVNFVNERGVSPLHLLATK 201 (763)
Q Consensus 122 Lh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~d~~G~TpLh~A~~~g~~~~iv~~LL~~~~~~~~~~d~~G~TpLh~A~~~ 201 (763)
||+|+..|+.+++++|+++|++++ .+|..|.||||+|+..|+. +++++|++ .|++++..|..|.||||+|+..
T Consensus 77 L~~A~~~~~~~~v~~Ll~~g~~~~-----~~~~~g~t~L~~A~~~~~~-~~~~~Ll~-~g~~~~~~~~~g~t~L~~A~~~ 149 (231)
T 3aji_A 77 LHIAASAGXDEIVKALLVKGAHVN-----AVNQNGCTPLHYAASKNRH-EIAVMLLE-GGANPDAKDHYDATAMHRAAAK 149 (231)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTT-----CCCTTSCCHHHHHHHTTCH-HHHHHHHH-TTCCTTCCCTTSCCHHHHHHHH
T ss_pred HHHHHHcCHHHHHHHHHHcCCCCC-----CCCCCCCCHHHHHHHcCCH-HHHHHHHH-cCCCCCCcCCCCCcHHHHHHHc
Confidence 999999999999999999999998 8899999999999999999 99999999 4899999999999999999998
Q ss_pred CCCccCCchHHHHHHHHHcCCCCCc
Q 004286 202 PNAFRSGSHLGLCTGIIYHCISVDK 226 (763)
Q Consensus 202 ~~~~~~~~~~~iv~~Ll~~ga~~~~ 226 (763)
++ .+++++|+++|++++.
T Consensus 150 ~~-------~~~v~~Ll~~g~~~~~ 167 (231)
T 3aji_A 150 GN-------LKMVHILLFYKASTNI 167 (231)
T ss_dssp TC-------HHHHHHHHHTTCCSCC
T ss_pred CC-------HHHHHHHHhcCCCccc
Confidence 85 6888888888776653
No 26
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=3e-37 Score=312.76 Aligned_cols=222 Identities=17% Similarity=0.151 Sum_probs=198.6
Q ss_pred cccCCCCCchHHHHHHHcCCHHHHHHHHh----cCCCccCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCcccc
Q 004286 77 LKIGDERGSTPLHIAAGLGNVSMCKCIAT----ADPRLIGERNHENETPFFLAARHGHKDAFLCLHYLCASVDDGYNYSR 152 (763)
Q Consensus 77 ~~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~----~~~~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~ 152 (763)
++.+|.+|+||||+|+..|+.++++.|++ .+.+ ++.+|..|.||||+|+..|+.+++++|+++|++++ .+
T Consensus 2 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-----~~ 75 (241)
T 1k1a_A 2 ATRADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRE-LDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPM-----AL 75 (241)
T ss_dssp -----CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCC-SCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-----CC
T ss_pred ccccCCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCC-CCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCcc-----cc
Confidence 45689999999999999999999999997 5666 99999999999999999999999999999999998 89
Q ss_pred CCCCChHHHHHHHcCChHHHHHHHHHhccc----cccccccCCCcHHHHHhcCCCCccCCchHHHHHHHHHcCCCCCccc
Q 004286 153 RKNGETILHYAISGYYFVDLAFQIIHLYEK----LVNFVNERGVSPLHLLATKPNAFRSGSHLGLCTGIIYHCISVDKLQ 228 (763)
Q Consensus 153 d~~G~TpLh~A~~~g~~~~iv~~LL~~~~~----~~~~~d~~G~TpLh~A~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~ 228 (763)
|..|.||||+|+..|+. +++++|++. +. +++..|..|.||||+|+..++ .+++++|+++|++++..+
T Consensus 76 ~~~g~t~l~~A~~~~~~-~~~~~Ll~~-~~~~~~~~~~~~~~g~t~L~~A~~~~~-------~~~~~~Ll~~g~~~~~~~ 146 (241)
T 1k1a_A 76 DRHGQTAAHLACEHRSP-TCLRALLDS-AAPGTLDLEARNYDGLTALHVAVNTEC-------QETVQLLLERGADIDAVD 146 (241)
T ss_dssp CTTSCCHHHHHHHTTCH-HHHHHHHHH-SCTTSCCTTCCCTTSCCHHHHHHHHTC-------HHHHHHHHHTTCCTTCCC
T ss_pred CCCCCCHHHHHHHcCCH-HHHHHHHHc-CCCccccccccCcCCCcHHHHHHHcCC-------HHHHHHHHHcCCCccccc
Confidence 99999999999999999 999999996 55 889999999999999999885 688888888887766322
Q ss_pred cccccccchhhhccccCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCccCCCCCCCCCCCccccccccc
Q 004286 229 EETSYDQHLFTTIKKQTNYPENYETCLNFIRLLKTMVIVLFNRGNTKKEPTPRDAEDPERSKGNDGTGDQGEESRHNIGA 308 (763)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 308 (763)
T Consensus 147 -------------------------------------------------------------------------------- 146 (241)
T 1k1a_A 147 -------------------------------------------------------------------------------- 146 (241)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCccCCCCCCCchhhHHhhccchhhhhhccchhHHHHHHHHHhhhccHHHHHHHHHhccCCceeccCCCCCCCCCCCCcc
Q 004286 309 QGHQFFPPNYGTCFEFVKLVSKPMLVILGLGSTKIRKIRDEKQKHTWSVQILDELLRRTSLYEYDYVGGKPLRRPSSQVE 388 (763)
Q Consensus 309 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~iv~~Ll~~~~~~~~d~~G~tpL~~a~~~~~ 388 (763)
T Consensus 147 -------------------------------------------------------------------------------- 146 (241)
T 1k1a_A 147 -------------------------------------------------------------------------------- 146 (241)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccCcccccccCCCCCCCCCCCCCCCCccccCccccccccccccCCCCCccccCCCCCCCCCCCCCCCCcHHHHHHHcCh
Q 004286 389 EDETIPYAIVDGGDTDADLEGDQQPDTSLTDHNVVTDTHKLSRNNGKNSEDRNEGGKTGSTIPDTVKRETPILIAAKNGI 468 (763)
Q Consensus 389 ~~~~~~~~~~~g~~~~~~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~G~tpLh~Aa~~g~ 468 (763)
+..|.||||+|+..|+
T Consensus 147 ----------------------------------------------------------------~~~g~t~L~~A~~~~~ 162 (241)
T 1k1a_A 147 ----------------------------------------------------------------IKSGRSPLIHAVENNS 162 (241)
T ss_dssp ----------------------------------------------------------------TTTCCCHHHHHHHTTC
T ss_pred ----------------------------------------------------------------ccCCCcHHHHHHHcCC
Confidence 1359999999999999
Q ss_pred HHHHHHHHHhCCccccccccCCCchhHHHHHcCChHHHHHHHhccchhhhhhccccCCCCchhhhHhhcCCCCC
Q 004286 469 TEIVEKILKSFPVAILDMNSEKKNVMLLAVENRQRHVYQLLLKTAIIQETVFRKVDDQGNSALHLAATLGDHKP 542 (763)
Q Consensus 469 ~eiv~~LL~~~~~~~~~~d~~G~T~LH~A~~~~~~~iv~~Ll~~~~~~~~~~n~~D~~G~TpLH~Aa~~g~~~~ 542 (763)
.+++++|++ .+.+++.+|..|+||||+|+..|+.+++++|++.++ +++.+|..|+||||+|+..|+.++
T Consensus 163 ~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga----~~~~~~~~g~tpl~~A~~~~~~~i 231 (241)
T 1k1a_A 163 LSMVQLLLQ-HGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGA----DSSLKNCHNDTPLMVARSRRVIDI 231 (241)
T ss_dssp HHHHHHHHH-TTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTC----CTTCCCTTSCCTTTTCSSHHHHHH
T ss_pred HHHHHHHHH-cCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCC----CCCCcCCCCCCHHHHHHhcCcHHH
Confidence 999999999 577789999999999999999999999999999998 689999999999999999887443
No 27
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=3.8e-36 Score=301.90 Aligned_cols=161 Identities=20% Similarity=0.243 Sum_probs=127.5
Q ss_pred CChHHHHHHHcCCHHHHHHHHHHhhhhccccccccCCCCCchHHHHHHHcCCHHHHHHHHhcC--CCccCC-CCCCCChH
Q 004286 45 GGTALHIAVSDGQEEIVEDLVRIIHEKQQLKVLKIGDERGSTPLHIAAGLGNVSMCKCIATAD--PRLIGE-RNHENETP 121 (763)
Q Consensus 45 g~TpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~~--~~~~~~-~~~~g~Tp 121 (763)
|+||||+||..|+.++++.|++.|. ...+.+|..|+||||+|+..|+.+++++|++++ .+ ++. .+..|.||
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~~-----~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~-~~~~~~~~g~t~ 75 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSKP-----SLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVN-LDDYPDDSGWTP 75 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHCG-----GGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCC-GGGCCCTTSCCH
T ss_pred CccHHHHHHHhCCHHHHHHHHhcCc-----cccccCCCCCCCHHHHHHHcCCHHHHHHHHhcccccc-ccccCCCCCCCH
Confidence 6788888888888888888888874 234457888888888888888888888888888 44 444 77788888
Q ss_pred HHHHHHcCCHHHHHHHHHcC--CCCCCCCccccCCCCChHHHHHHHcCChHHHHHHHHHhccccccccccCCCcHHHHHh
Q 004286 122 FFLAARHGHKDAFLCLHYLC--ASVDDGYNYSRRKNGETILHYAISGYYFVDLAFQIIHLYEKLVNFVNERGVSPLHLLA 199 (763)
Q Consensus 122 Lh~A~~~g~~~~v~~Ll~~g--a~~~~~~~~~~d~~G~TpLh~A~~~g~~~~iv~~LL~~~~~~~~~~d~~G~TpLh~A~ 199 (763)
||+|+..|+.+++++|+++| ++++ ..|..|.||||+|+..|+. +++++|+++ |++++.+|..|.||||+|+
T Consensus 76 L~~A~~~~~~~~~~~Ll~~g~~~~~~-----~~~~~g~t~L~~A~~~~~~-~~~~~Ll~~-g~~~~~~~~~g~t~L~~A~ 148 (228)
T 2dzn_A 76 FHIACSVGNLEVVKSLYDRPLKPDLN-----KITNQGVTCLHLAVGKKWF-EVSQFLIEN-GASVRIKDKFNQIPLHRAA 148 (228)
T ss_dssp HHHHHHHCCHHHHHHHHSSSSCCCTT-----CCCTTCCCHHHHHHHTTCH-HHHHHHHHT-TCCSCCCCTTSCCHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHhCCCCcccc-----cCCcCCCCHHHHHHHcCCH-hHHHHHHHc-CCCccccCCCCCCHHHHHH
Confidence 88888888888888888888 6666 7788888888888888888 888888884 8888888888888888888
Q ss_pred cCCCCccCCchHHHHHHHHHcC-CCCC
Q 004286 200 TKPNAFRSGSHLGLCTGIIYHC-ISVD 225 (763)
Q Consensus 200 ~~~~~~~~~~~~~iv~~Ll~~g-a~~~ 225 (763)
..++ .+++++|+++| ++++
T Consensus 149 ~~~~-------~~~v~~Ll~~g~~~~~ 168 (228)
T 2dzn_A 149 SVGS-------LKLIELLCGLGKSAVN 168 (228)
T ss_dssp HTTC-------HHHHHHHHTTTCCCSC
T ss_pred HcCC-------HHHHHHHHhcCccccc
Confidence 8774 57777776665 4443
No 28
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=3.2e-36 Score=302.43 Aligned_cols=214 Identities=18% Similarity=0.167 Sum_probs=193.3
Q ss_pred CchHHHHHHHcCCHHHHHHHHhcCCCccCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCccc-cCCCCChHHHH
Q 004286 84 GSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAARHGHKDAFLCLHYLCASVDDGYNYS-RRKNGETILHY 162 (763)
Q Consensus 84 g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~-~d~~G~TpLh~ 162 (763)
|+||||+|+..|+.++++.|++.+++..+.+|..|.||||+|+..|+.+++++|+++|++++ ++. .|..|.||||+
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~---~~~~~~~~g~t~L~~ 78 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVN---LDDYPDDSGWTPFHI 78 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCC---GGGCCCTTSCCHHHH
T ss_pred CccHHHHHHHhCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhcccccc---ccccCCCCCCCHHHH
Confidence 78999999999999999999999998777799999999999999999999999999995544 114 78999999999
Q ss_pred HHHcCChHHHHHHHHHhcc--ccccccccCCCcHHHHHhcCCCCccCCchHHHHHHHHHcCCCCCccccccccccchhhh
Q 004286 163 AISGYYFVDLAFQIIHLYE--KLVNFVNERGVSPLHLLATKPNAFRSGSHLGLCTGIIYHCISVDKLQEETSYDQHLFTT 240 (763)
Q Consensus 163 A~~~g~~~~iv~~LL~~~~--~~~~~~d~~G~TpLh~A~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~ 240 (763)
|+..|+. +++++|++. | ++++..|..|.||||+|+..++ .+++++|+++|++++.
T Consensus 79 A~~~~~~-~~~~~Ll~~-g~~~~~~~~~~~g~t~L~~A~~~~~-------~~~~~~Ll~~g~~~~~-------------- 135 (228)
T 2dzn_A 79 ACSVGNL-EVVKSLYDR-PLKPDLNKITNQGVTCLHLAVGKKW-------FEVSQFLIENGASVRI-------------- 135 (228)
T ss_dssp HHHHCCH-HHHHHHHSS-SSCCCTTCCCTTCCCHHHHHHHTTC-------HHHHHHHHHTTCCSCC--------------
T ss_pred HHHcCCH-HHHHHHHhC-CCCcccccCCcCCCCHHHHHHHcCC-------HhHHHHHHHcCCCccc--------------
Confidence 9999999 999999995 6 8999999999999999999985 6888888888877653
Q ss_pred ccccCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCccCCCCCCCCCCCcccccccccCCccCCCCCCCc
Q 004286 241 IKKQTNYPENYETCLNFIRLLKTMVIVLFNRGNTKKEPTPRDAEDPERSKGNDGTGDQGEESRHNIGAQGHQFFPPNYGT 320 (763)
Q Consensus 241 ~~~~~~~p~~~~~~~~~~~~~~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~p~~~~~ 320 (763)
T Consensus 136 -------------------------------------------------------------------------------- 135 (228)
T 2dzn_A 136 -------------------------------------------------------------------------------- 135 (228)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhHHhhccchhhhhhccchhHHHHHHHHHhhhccHHHHHHHHHhccCCceeccCCCCCCCCCCCCcccccCcccccccC
Q 004286 321 CFEFVKLVSKPMLVILGLGSTKIRKIRDEKQKHTWSVQILDELLRRTSLYEYDYVGGKPLRRPSSQVEEDETIPYAIVDG 400 (763)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~iv~~Ll~~~~~~~~d~~G~tpL~~a~~~~~~~~~~~~~~~~g 400 (763)
T Consensus 136 -------------------------------------------------------------------------------- 135 (228)
T 2dzn_A 136 -------------------------------------------------------------------------------- 135 (228)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCCCCCCCCCccccCccccccccccccCCCCCccccCCCCCCCCCCCCCCCCcHHHHHHHcChHHHHHHHHHhCC
Q 004286 401 GDTDADLEGDQQPDTSLTDHNVVTDTHKLSRNNGKNSEDRNEGGKTGSTIPDTVKRETPILIAAKNGITEIVEKILKSFP 480 (763)
Q Consensus 401 ~~~~~~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~G~tpLh~Aa~~g~~eiv~~LL~~~~ 480 (763)
+|..|.||||+|+..|+.+++++|++.++
T Consensus 136 ---------------------------------------------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 164 (228)
T 2dzn_A 136 ---------------------------------------------------KDKFNQIPLHRAASVGSLKLIELLCGLGK 164 (228)
T ss_dssp ---------------------------------------------------CCTTSCCHHHHHHHTTCHHHHHHHHTTTC
T ss_pred ---------------------------------------------------cCCCCCCHHHHHHHcCCHHHHHHHHhcCc
Confidence 23469999999999999999999999766
Q ss_pred ccccccccCCCchhHHHHHcCChHHHHHHH-hccchhhhhhccccCCCCchhhhHhhcC
Q 004286 481 VAILDMNSEKKNVMLLAVENRQRHVYQLLL-KTAIIQETVFRKVDDQGNSALHLAATLG 538 (763)
Q Consensus 481 ~~~~~~d~~G~T~LH~A~~~~~~~iv~~Ll-~~~~~~~~~~n~~D~~G~TpLH~Aa~~g 538 (763)
.+++.+|.+|+||||+|+..|+.+++++|+ +.++ +++.+|.+|+||||+|++.+
T Consensus 165 ~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga----~~~~~~~~g~t~l~~A~~~~ 219 (228)
T 2dzn_A 165 SAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGA----EYDLVDNKGAKAEDVALNEQ 219 (228)
T ss_dssp CCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCC----CSCCBCTTSCBGGGGCSSTT
T ss_pred ccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC----CCCccCCCCCcHHHHHHHHH
Confidence 889999999999999999999999999999 7787 68999999999999998654
No 29
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=4.3e-36 Score=303.68 Aligned_cols=169 Identities=20% Similarity=0.165 Sum_probs=152.2
Q ss_pred ccccCCCCChHHHHHHHcCCHHHHHHHHHHhhhhccccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCccCCCCCC
Q 004286 38 EARITRSGGTALHIAVSDGQEEIVEDLVRIIHEKQQLKVLKIGDERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHE 117 (763)
Q Consensus 38 ~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~ 117 (763)
++..|..|.||||.|+..|+.+++++|++.| .+++.+|..|.||||+|+..|+.+++++|++++++.....+..
T Consensus 2 ~~~~d~~~~~~l~~A~~~g~~~~~~~Ll~~g------~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~ 75 (240)
T 3eu9_A 2 MTHIDDYSTWDIVKATQYGIYERCRELVEAG------YDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDL 75 (240)
T ss_dssp CCCCSCGGGCCHHHHHHTTCHHHHHHHHHTT------CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTT
T ss_pred ccccccccchHHHHHHHcCChHHHHHHHHcC------CCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCc
Confidence 4557889999999999999999999999988 6788999999999999999999999999999999855556666
Q ss_pred CChHHHHHHHcCCHHHHHHHHHcCCCCCCCCccccCCCCChHHHHHHHcCChHHHHHHHHHhccccccccccCCCcHHHH
Q 004286 118 NETPFFLAARHGHKDAFLCLHYLCASVDDGYNYSRRKNGETILHYAISGYYFVDLAFQIIHLYEKLVNFVNERGVSPLHL 197 (763)
Q Consensus 118 g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~d~~G~TpLh~A~~~g~~~~iv~~LL~~~~~~~~~~d~~G~TpLh~ 197 (763)
|.||||+|+..|+.+++++|+++|++++ .+|..|.||||+|+..|+. +++++|++ .+++++..|..|.||||+
T Consensus 76 ~~t~L~~A~~~~~~~~v~~Ll~~g~~~~-----~~~~~g~t~l~~A~~~~~~-~~~~~Ll~-~~~~~~~~~~~g~t~l~~ 148 (240)
T 3eu9_A 76 NSTPLHWATRQGHLSMVVQLMKYGADPS-----LIDGEGCSCIHLAAQFGHT-SIVAYLIA-KGQDVDMMDQNGMTPLMW 148 (240)
T ss_dssp TBCHHHHHHHHTCHHHHHHHHHTTCCTT-----CCCTTSCCHHHHHHHTTCH-HHHHHHHH-TTCCTTCCCTTSCCHHHH
T ss_pred CCChhHHHHHcCCHHHHHHHHHcCCCCc-----ccCCCCCCHHHHHHHcCHH-HHHHHHHh-cCCCccccCCCCCcHHHH
Confidence 9999999999999999999999999998 8999999999999999999 99999999 499999999999999999
Q ss_pred HhcCCCCccCCchHHHHHHHHHcCCCCC
Q 004286 198 LATKPNAFRSGSHLGLCTGIIYHCISVD 225 (763)
Q Consensus 198 A~~~~~~~~~~~~~~iv~~Ll~~ga~~~ 225 (763)
|+..+. ..+++++|++.|++++
T Consensus 149 a~~~~~------~~~~~~~L~~~~~~~~ 170 (240)
T 3eu9_A 149 AAYRTH------SVDPTRLLLTFNVSVN 170 (240)
T ss_dssp HHHHCC------SSTTHHHHHHTTCCTT
T ss_pred HHHhCC------hHHHHHHHHhcCCCcc
Confidence 997654 2466777777766655
No 30
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=8.8e-37 Score=314.02 Aligned_cols=217 Identities=18% Similarity=0.191 Sum_probs=170.3
Q ss_pred cCCCCCchHHHHHHHcCCHHHHHHHHhcCCCc-------cCCCCCCCChHHHHHHHcCCH-HHHHHHHHcCCCCCCCCcc
Q 004286 79 IGDERGSTPLHIAAGLGNVSMCKCIATADPRL-------IGERNHENETPFFLAARHGHK-DAFLCLHYLCASVDDGYNY 150 (763)
Q Consensus 79 ~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~-------~~~~~~~g~TpLh~A~~~g~~-~~v~~Ll~~ga~~~~~~~~ 150 (763)
.+|..+.+||+.|+..|+.++|++|++.+++. ++..+..|.||||+|+..++. .++++|++.|+++|
T Consensus 6 kkd~~~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn----- 80 (269)
T 4b93_B 6 KKDYREVEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGVN----- 80 (269)
T ss_dssp -CCCHHHHHHHHHHHTTCHHHHHHHHTCC----------------------------------------CCCCTT-----
T ss_pred ccCccchhHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCCC-----
Confidence 46778899999999999999999999988753 466778899999999998876 58899999999999
Q ss_pred ccCCCCChHHHHHHHcCChHHHHHHHHHhccccccccccCCCcHHHHHhcCCCCccCCchHHHHHHHHHcCCCCCccccc
Q 004286 151 SRRKNGETILHYAISGYYFVDLAFQIIHLYEKLVNFVNERGVSPLHLLATKPNAFRSGSHLGLCTGIIYHCISVDKLQEE 230 (763)
Q Consensus 151 ~~d~~G~TpLh~A~~~g~~~~iv~~LL~~~~~~~~~~d~~G~TpLh~A~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~ 230 (763)
.+|.+|+||||+|+..|+. +++++|++ .+++++..+.+|.||+|+|+..++ .+++++|+++|++++.
T Consensus 81 ~~d~~G~TpLh~A~~~g~~-~~v~~Ll~-~~a~~~~~~~~g~t~l~~a~~~~~-------~~~~~~Ll~~g~~~n~---- 147 (269)
T 4b93_B 81 VTSQDGSSPLHVAALHGRA-DLIPLLLK-HGANAGARNADQAVPLHLACQQGH-------FQVVKCLLDSNAKPNK---- 147 (269)
T ss_dssp CCCTTSCCHHHHHHHTTCT-THHHHHHH-TTCCTTCCCTTCCCHHHHHHHHTC-------HHHHHHHHHTTCCSCC----
T ss_pred CcCCCCCCHHHHHHHcCcH-HHHHHHHh-cCCCcCccCCCCCCccccccccCh-------HHHHHHHHHCCCCCCC----
Confidence 8999999999999999999 99999999 599999999999999999999885 6888888888877763
Q ss_pred cccccchhhhccccCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCccCCCCCCCCCCCcccccccccCC
Q 004286 231 TSYDQHLFTTIKKQTNYPENYETCLNFIRLLKTMVIVLFNRGNTKKEPTPRDAEDPERSKGNDGTGDQGEESRHNIGAQG 310 (763)
Q Consensus 231 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 310 (763)
T Consensus 148 -------------------------------------------------------------------------------- 147 (269)
T 4b93_B 148 -------------------------------------------------------------------------------- 147 (269)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCCCCCCCchhhHHhhccchhhhhhccchhHHHHHHHHHhhhccHHHHHHHHHhccCCceeccCCCCCCCCCCCCcccc
Q 004286 311 HQFFPPNYGTCFEFVKLVSKPMLVILGLGSTKIRKIRDEKQKHTWSVQILDELLRRTSLYEYDYVGGKPLRRPSSQVEED 390 (763)
Q Consensus 311 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~iv~~Ll~~~~~~~~d~~G~tpL~~a~~~~~~~ 390 (763)
T Consensus 148 -------------------------------------------------------------------------------- 147 (269)
T 4b93_B 148 -------------------------------------------------------------------------------- 147 (269)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCcccccccCCCCCCCCCCCCCCCCccccCccccccccccccCCCCCccccCCCCCCCCCCCCCCCCcHHHHHHHcChHH
Q 004286 391 ETIPYAIVDGGDTDADLEGDQQPDTSLTDHNVVTDTHKLSRNNGKNSEDRNEGGKTGSTIPDTVKRETPILIAAKNGITE 470 (763)
Q Consensus 391 ~~~~~~~~~g~~~~~~~~g~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~G~tpLh~Aa~~g~~e 470 (763)
+|..|+||||+||..|+.+
T Consensus 148 -------------------------------------------------------------~d~~g~TpL~~A~~~g~~~ 166 (269)
T 4b93_B 148 -------------------------------------------------------------KDLSGNTPLIYACSGGHHE 166 (269)
T ss_dssp -------------------------------------------------------------CCTTCCCHHHHHHHTTCGG
T ss_pred -------------------------------------------------------------CCCCCCCHHHHHHHCCCHH
Confidence 2446999999999999999
Q ss_pred HHHHHHHhCCccccccccCCCchhHHHHHcCChHHHHHHHhccchhhhhhccccCCCCchhhhHhhcCC
Q 004286 471 IVEKILKSFPVAILDMNSEKKNVMLLAVENRQRHVYQLLLKTAIIQETVFRKVDDQGNSALHLAATLGD 539 (763)
Q Consensus 471 iv~~LL~~~~~~~~~~d~~G~T~LH~A~~~~~~~iv~~Ll~~~~~~~~~~n~~D~~G~TpLH~Aa~~g~ 539 (763)
+|++||+ .+.+++.+|..|+||||+||.+|+.++|++|++.|+ ++|.+|.+|+||||+|+++++
T Consensus 167 ~v~~Ll~-~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Ga----d~~~~d~~G~TpL~~A~~~~~ 230 (269)
T 4b93_B 167 LVALLLQ-HGASINASNNKGNTALHEAVIEKHVFVVELLLLHGA----SVQVLNKRQRTAVDCAEQNSK 230 (269)
T ss_dssp GHHHHHH-TTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTC----CSCCCCTTSCCSGGGSCTTCH
T ss_pred HHHHHHH-CCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCC----CCCCcCCCCCCHHHHHHhCCc
Confidence 9999999 577789999999999999999999999999999998 799999999999999998765
No 31
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=100.00 E-value=2.6e-37 Score=328.08 Aligned_cols=181 Identities=8% Similarity=-0.025 Sum_probs=145.3
Q ss_pred cCCHHHHHHHHccCCCccccccCCCCChHHHHHHHcCCHHHHHHHHHHhhhhcccccccc-----------CCCCCchHH
Q 004286 20 KGKWNEVVENYGKDDRIHEARITRSGGTALHIAVSDGQEEIVEDLVRIIHEKQQLKVLKI-----------GDERGSTPL 88 (763)
Q Consensus 20 ~g~~~~v~~lL~~~~~~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~-----------~d~~g~TpL 88 (763)
....+.+..++.+ |++++..|..|.|++| |+.++|+.|+++|.+++..+.... +.....+.+
T Consensus 29 ~~~~dlv~~ll~~--ga~i~~~~~~g~~~~~-----g~~~~v~~Ll~~g~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 101 (327)
T 1sw6_A 29 TFTHDLTSDFLSS--PLKIMKALPSPVVNDN-----EQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQ 101 (327)
T ss_dssp ECCTTCCCSTTTS--SCCCEECBCCCCCCCH-----HHHHHHHHHHHHHHC-----------------------------
T ss_pred hhcCchHHHHhhC--CcccccCCCCCCcccC-----chhHHHHHHHHhccCCccccchHhhhcccccccccccCCccchh
Confidence 4445556666666 8999999999999988 999999999999976543222111 111223346
Q ss_pred HHHHHcCCHHHHHHHHhcCCCccCC-CCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCccccCCCCChHHHHHHHcC
Q 004286 89 HIAAGLGNVSMCKCIATADPRLIGE-RNHENETPFFLAARHGHKDAFLCLHYLCASVDDGYNYSRRKNGETILHYAISGY 167 (763)
Q Consensus 89 h~Aa~~g~~~~v~~Ll~~~~~~~~~-~~~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~d~~G~TpLh~A~~~g 167 (763)
|+|+..+..+++++|++.|++ +|. +|..|+||||+||..|+.++|++|+++|++++ .+|.+|+||||+|+..|
T Consensus 102 ~~a~~~~~~~~~~~l~~~g~d-vn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n-----~~d~~g~TpLh~A~~~g 175 (327)
T 1sw6_A 102 HVSFDSLLQEVNDAFPNTQLN-LNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRL-----YGDNMGESCLVKAVKSV 175 (327)
T ss_dssp --CHHHHHHHHHHHCTTSCCC-SCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-----BCCTTCCCHHHHHHHSS
T ss_pred HHHHHhhHHHHHHHHHhcCCC-cccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC-----CcCCCCCCHHHHHHHhc
Confidence 889998999999999999998 999 89999999999999999999999999999999 89999999999999999
Q ss_pred C---hHHHHHHHHHhccccccccccCCCcHHHHHhc----CCCCccCCchHHHHHHHHHcC
Q 004286 168 Y---FVDLAFQIIHLYEKLVNFVNERGVSPLHLLAT----KPNAFRSGSHLGLCTGIIYHC 221 (763)
Q Consensus 168 ~---~~~iv~~LL~~~~~~~~~~d~~G~TpLh~A~~----~~~~~~~~~~~~iv~~Ll~~g 221 (763)
+ . ++++.|++...++++.+|..|.||||+|+. .+ +.+++++|++.+
T Consensus 176 ~~~~~-~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g-------~~~~v~~Ll~~~ 228 (327)
T 1sw6_A 176 NNYDS-GTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTG-------CSAAAKYYLDIL 228 (327)
T ss_dssp HHHHT-TCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTT-------CHHHHHHHHHHH
T ss_pred ccccH-HHHHHHHHhhhccccCCCCCCCCHHHHHHHHccccc-------cHHHHHHHHHHH
Confidence 8 7 889999997668999999999999999998 66 469999998765
No 32
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=8.1e-36 Score=300.25 Aligned_cols=195 Identities=25% Similarity=0.309 Sum_probs=182.6
Q ss_pred hhHHHHHHHHcCCHHHHHHHHccCCCccccccCCCCChHHHHHHHcCCHHHHHHHHHHhhhhccccccccCCCCCchHHH
Q 004286 10 LKKGLFKSAMKGKWNEVVENYGKDDRIHEARITRSGGTALHIAVSDGQEEIVEDLVRIIHEKQQLKVLKIGDERGSTPLH 89 (763)
Q Consensus 10 ~~~~L~~aa~~g~~~~v~~lL~~~~~~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~d~~g~TpLh 89 (763)
..++|+.||..|+.+.++.++... ....+..|..|+||||+|+..|+.+++++|+++| ++++.+|..|+||||
T Consensus 6 ~~~~l~~A~~~g~~~~v~~ll~~~-~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g------~~~~~~~~~g~t~L~ 78 (231)
T 3aji_A 6 SNIMICNLAYSGKLDELKERILAD-KSLATRTDQDSRTALHWACSAGHTEIVEFLLQLG------VPVNDKDDAGWSPLH 78 (231)
T ss_dssp SSSHHHHHHHHTCHHHHHHHHHHC-GGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTT------CCSCCCCTTSCCHHH
T ss_pred ccchHHHHHHhCCHHHHHHHHHhc-hhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhC------CCCCCcCCCCCCHHH
Confidence 467899999999999999999885 3456778999999999999999999999999988 678999999999999
Q ss_pred HHHHcCCHHHHHHHHhcCCCccCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCccccCCCCChHHHHHHHcCCh
Q 004286 90 IAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAARHGHKDAFLCLHYLCASVDDGYNYSRRKNGETILHYAISGYYF 169 (763)
Q Consensus 90 ~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~d~~G~TpLh~A~~~g~~ 169 (763)
+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..|+.+++++|+++|++++ .+|..|.||||+|+..|+.
T Consensus 79 ~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-----~~~~~g~t~L~~A~~~~~~ 152 (231)
T 3aji_A 79 IAASAGXDEIVKALLVKGAH-VNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPD-----AKDHYDATAMHRAAAKGNL 152 (231)
T ss_dssp HHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-----CCCTTSCCHHHHHHHHTCH
T ss_pred HHHHcCHHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-----CcCCCCCcHHHHHHHcCCH
Confidence 99999999999999999998 89999999999999999999999999999999998 8999999999999999999
Q ss_pred HHHHHHHHHhccccccccccCCCcHHHHHhcCCCCccCCchHHHHHHHHHcCCCCCc
Q 004286 170 VDLAFQIIHLYEKLVNFVNERGVSPLHLLATKPNAFRSGSHLGLCTGIIYHCISVDK 226 (763)
Q Consensus 170 ~~iv~~LL~~~~~~~~~~d~~G~TpLh~A~~~~~~~~~~~~~~iv~~Ll~~ga~~~~ 226 (763)
+++++|++ .|++++.+|..|.||||+|+..++ .+++++|+++|++++.
T Consensus 153 -~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~-------~~~v~~Ll~~ga~~~~ 200 (231)
T 3aji_A 153 -KMVHILLF-YKASTNIQDTEGNTPLHLACDEER-------VEEAKFLVTQGASIYI 200 (231)
T ss_dssp -HHHHHHHH-TTCCSCCCCTTSCCHHHHHHHTTC-------HHHHHHHHHTTCCSCC
T ss_pred -HHHHHHHh-cCCCccccCCCCCCHHHHHHHCCC-------HHHHHHHHHCCCCCCC
Confidence 99999999 599999999999999999999985 6999999988887763
No 33
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=2.4e-36 Score=314.18 Aligned_cols=182 Identities=13% Similarity=0.067 Sum_probs=162.8
Q ss_pred HHcCCHHHHHHHHccCCCccccccCCCCChHHHHHHHcCCHHHHHHHHHHhhhhccccccccCCCCCchHHHHHHHcCCH
Q 004286 18 AMKGKWNEVVENYGKDDRIHEARITRSGGTALHIAVSDGQEEIVEDLVRIIHEKQQLKVLKIGDERGSTPLHIAAGLGNV 97 (763)
Q Consensus 18 a~~g~~~~v~~lL~~~~~~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~d~~g~TpLh~Aa~~g~~ 97 (763)
+...+.+.+.++|.+. +++.+|..|+||||+|+..|+.+++++|+++| ++++.+ +|+||||+|+..|+.
T Consensus 7 i~~~~~~~v~~lL~~~---~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g------~~~~~~--~g~t~L~~A~~~g~~ 75 (285)
T 3kea_A 7 INTWKSKQLKSFLSSK---DTFKADVHGHSASYYAIADNNVRLVCTLLNAG------ALKNLL--ENEFPLHQAATLEDT 75 (285)
T ss_dssp GGGCCHHHHHHHHHST---TTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT------GGGSCC--TTCCHHHHHTTSSSC
T ss_pred HHhcCHHHHHHHHHhC---CCCccCCCCCCHHHHHHHcCCHHHHHHHHhCC------CCCCCC--CCCCHHHHHHHcCCH
Confidence 4567889999999883 57889999999999999999999999999998 456666 499999999999999
Q ss_pred HHHHHHHhcCCCccCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCccccCCCC-ChHHHHHHHcCChHHHHHHH
Q 004286 98 SMCKCIATADPRLIGERNHENETPFFLAARHGHKDAFLCLHYLCASVDDGYNYSRRKNG-ETILHYAISGYYFVDLAFQI 176 (763)
Q Consensus 98 ~~v~~Ll~~~~~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~d~~G-~TpLh~A~~~g~~~~iv~~L 176 (763)
+++++|+++|++ ++.+|..|+||||+|+..|+.+++++|+++|++++ .+|..| .||||+|+..|+. +++++|
T Consensus 76 ~~v~~Ll~~ga~-~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~-----~~~~~g~~t~L~~A~~~~~~-~~v~~L 148 (285)
T 3kea_A 76 KIVKILLFSGLD-DSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLM-----FYGKTGWKTSFYHAVMLNDV-SIVSYF 148 (285)
T ss_dssp HHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGG-----GCSSSGGGSHHHHHHHTTCH-HHHHHH
T ss_pred HHHHHHHHCCCC-CCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCC-----ccCCCCCCCHHHHHHHcCCH-HHHHHH
Confidence 999999999999 99999999999999999999999999999999998 899999 8999999999999 999999
Q ss_pred HHhccccccccccCCCcHHHHHhcCCCCccCCchHHHHHHHHHcCCCCCc
Q 004286 177 IHLYEKLVNFVNERGVSPLHLLATKPNAFRSGSHLGLCTGIIYHCISVDK 226 (763)
Q Consensus 177 L~~~~~~~~~~d~~G~TpLh~A~~~~~~~~~~~~~~iv~~Ll~~ga~~~~ 226 (763)
++. ++++... ..|.||||+|+..++ .+++++|+++|++++.
T Consensus 149 l~~-g~~~~~~-~~g~t~L~~A~~~g~-------~~~v~~Ll~~gad~n~ 189 (285)
T 3kea_A 149 LSE-IPSTFDL-AILLSCIHITIKNGH-------VDMMILLLDYMTSTNT 189 (285)
T ss_dssp HTT-SCTTCCC-STHHHHHHHHHHTTC-------HHHHHHHHHHHHHTCT
T ss_pred HhC-CCccccc-cCCccHHHHHHHcCh-------HHHHHHHHHcCCCCCc
Confidence 995 6655222 289999999999985 6888888888776653
No 34
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=9e-35 Score=290.87 Aligned_cols=148 Identities=26% Similarity=0.338 Sum_probs=72.2
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHHhhhhccccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCccCCCCCCCChH
Q 004286 42 TRSGGTALHIAVSDGQEEIVEDLVRIIHEKQQLKVLKIGDERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETP 121 (763)
Q Consensus 42 d~~g~TpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~Tp 121 (763)
|..|+||||+||..|+.+++++|+++| ++++.+|..|+||||+|+..|+.+++++|+++++..++.++..|.||
T Consensus 22 d~~g~t~L~~A~~~g~~~~v~~Ll~~g------~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~ 95 (223)
T 2f8y_A 22 DRTGETALHLAARYSRSDAAKRLLEAS------ADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTP 95 (223)
T ss_dssp TTTCCCHHHHHHHTTCHHHHHHHHHTT------CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCH
T ss_pred CCCCCchHHHHHHcCCHHHHHHHHHcC------CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcH
Confidence 444555555555555555555555444 33444444455555555555555555555544443344444445555
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCCCccccCCCCChHHHHHHHcCChHHHHHHHHHhccccccccccCCCcHHHHHhcC
Q 004286 122 FFLAARHGHKDAFLCLHYLCASVDDGYNYSRRKNGETILHYAISGYYFVDLAFQIIHLYEKLVNFVNERGVSPLHLLATK 201 (763)
Q Consensus 122 Lh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~d~~G~TpLh~A~~~g~~~~iv~~LL~~~~~~~~~~d~~G~TpLh~A~~~ 201 (763)
||+|+..|+.+++++|+++|++++ .+|..|.||||+|+..|+. +++++|++. |++++.+|..|.||||+|+..
T Consensus 96 L~~A~~~~~~~~~~~Ll~~g~~~~-----~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~ 168 (223)
T 2f8y_A 96 LILAARLAVEGMLEDLINSHADVN-----AVDDLGKSALHWAAAVNNV-DAAVVLLKN-GANKDMQNNREETPLFLAARE 168 (223)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTT-----CBCTTSCBHHHHHHHTTCH-HHHHHHHHT-TCCTTCCCTTCCCHHHHHHHH
T ss_pred HHHHHHhCcHHHHHHHHHcCCCCc-----CcCCCCCcHHHHHHHcCCH-HHHHHHHHc-CCCCCCcCCCCcCHHHHHHHc
Confidence 555555555555555555444444 4444455555555555554 555555442 444444444444444444444
Q ss_pred C
Q 004286 202 P 202 (763)
Q Consensus 202 ~ 202 (763)
+
T Consensus 169 ~ 169 (223)
T 2f8y_A 169 G 169 (223)
T ss_dssp T
T ss_pred C
Confidence 4
No 35
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=8.1e-35 Score=302.67 Aligned_cols=131 Identities=15% Similarity=0.094 Sum_probs=121.3
Q ss_pred ccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCccCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCccccCCC
Q 004286 76 VLKIGDERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAARHGHKDAFLCLHYLCASVDDGYNYSRRKN 155 (763)
Q Consensus 76 ~~~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~d~~ 155 (763)
+++.+|.+|+||||+|+..|+.+++++|+++|++ ++.+| |+||||+|+..|+.+++++|+++|++++ .+|..
T Consensus 23 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~--g~t~L~~A~~~g~~~~v~~Ll~~ga~~~-----~~d~~ 94 (285)
T 3kea_A 23 DTFKADVHGHSASYYAIADNNVRLVCTLLNAGAL-KNLLE--NEFPLHQAATLEDTKIVKILLFSGLDDS-----QFDDK 94 (285)
T ss_dssp TTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGG-GSCCT--TCCHHHHHTTSSSCHHHHHHHHTTCCTT-----CCCTT
T ss_pred CCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCC-CCCCC--CCCHHHHHHHcCCHHHHHHHHHCCCCCC-----CcCCC
Confidence 4889999999999999999999999999999998 78774 9999999999999999999999999998 89999
Q ss_pred CChHHHHHHHcCChHHHHHHHHHhccccccccccCC-CcHHHHHhcCCCCccCCchHHHHHHHHHcCCC
Q 004286 156 GETILHYAISGYYFVDLAFQIIHLYEKLVNFVNERG-VSPLHLLATKPNAFRSGSHLGLCTGIIYHCIS 223 (763)
Q Consensus 156 G~TpLh~A~~~g~~~~iv~~LL~~~~~~~~~~d~~G-~TpLh~A~~~~~~~~~~~~~~iv~~Ll~~ga~ 223 (763)
|.||||+|+..|+. +++++|++. |++++..|..| .||||+|+..++ .+++++|+++|++
T Consensus 95 g~t~L~~A~~~g~~-~~v~~Ll~~-ga~~~~~~~~g~~t~L~~A~~~~~-------~~~v~~Ll~~g~~ 154 (285)
T 3kea_A 95 GNTALYYAVDSGNM-QTVKLFVKK-NWRLMFYGKTGWKTSFYHAVMLND-------VSIVSYFLSEIPS 154 (285)
T ss_dssp SCCHHHHHHHTTCH-HHHHHHHHH-CGGGGGCSSSGGGSHHHHHHHTTC-------HHHHHHHHTTSCT
T ss_pred CCcHHHHHHHcCCH-HHHHHHHhc-CCCCCccCCCCCCCHHHHHHHcCC-------HHHHHHHHhCCCc
Confidence 99999999999999 999999995 99999999999 899999999985 5777777776643
No 36
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=3.2e-34 Score=286.82 Aligned_cols=194 Identities=17% Similarity=0.116 Sum_probs=179.7
Q ss_pred hhHHHHHHHHcCCHHHHHHHHccCCCccccccCCCCChHHHHHHHcCCHHHHHHHHHHhhhhccccccccCCCCCchHHH
Q 004286 10 LKKGLFKSAMKGKWNEVVENYGKDDRIHEARITRSGGTALHIAVSDGQEEIVEDLVRIIHEKQQLKVLKIGDERGSTPLH 89 (763)
Q Consensus 10 ~~~~L~~aa~~g~~~~v~~lL~~~~~~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~d~~g~TpLh 89 (763)
..++||.|+..|+.+.++.++.. +++++..|..|+||||+|+..|+.+++++|++++. .+++.+|..|.||||
T Consensus 25 g~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~-----~~~~~~~~~g~t~L~ 97 (223)
T 2f8y_A 25 GETALHLAARYSRSDAAKRLLEA--SADANIQDNMGRTPLHAAVSADAQGVFQILIRNRA-----TDLDARMHDGTTPLI 97 (223)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBTT-----SCTTCCCTTCCCHHH
T ss_pred CCchHHHHHHcCCHHHHHHHHHc--CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCC-----CCcccCCCCCCcHHH
Confidence 47899999999999999999988 88889999999999999999999999999999873 368889999999999
Q ss_pred HHHHcCCHHHHHHHHhcCCCccCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCccccCCCCChHHHHHHHcCCh
Q 004286 90 IAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAARHGHKDAFLCLHYLCASVDDGYNYSRRKNGETILHYAISGYYF 169 (763)
Q Consensus 90 ~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~d~~G~TpLh~A~~~g~~ 169 (763)
+|+..|+.+++++|++++++ ++.+|..|.||||+|+..|+.+++++|+++|++++ .+|..|.||||+|+..|+.
T Consensus 98 ~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-----~~~~~g~t~L~~A~~~~~~ 171 (223)
T 2f8y_A 98 LAARLAVEGMLEDLINSHAD-VNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKD-----MQNNREETPLFLAAREGSY 171 (223)
T ss_dssp HHHHHTCHHHHHHHHHTTCC-TTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTT-----CCCTTCCCHHHHHHHHTCH
T ss_pred HHHHhCcHHHHHHHHHcCCC-CcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC-----CcCCCCcCHHHHHHHcCCH
Confidence 99999999999999999998 89999999999999999999999999999999998 8999999999999999999
Q ss_pred HHHHHHHHHhccccccccccCCCcHHHHHhcCCCCccCCchHHHHHHHHHcCCCCC
Q 004286 170 VDLAFQIIHLYEKLVNFVNERGVSPLHLLATKPNAFRSGSHLGLCTGIIYHCISVD 225 (763)
Q Consensus 170 ~~iv~~LL~~~~~~~~~~d~~G~TpLh~A~~~~~~~~~~~~~~iv~~Ll~~ga~~~ 225 (763)
+++++|++ .|++++.+|..|.||||+|+..++ .+++++|+++|+...
T Consensus 172 -~~v~~Ll~-~ga~~~~~~~~g~t~l~~A~~~~~-------~~i~~~L~~~g~~~~ 218 (223)
T 2f8y_A 172 -ETAKVLLD-HFANRDITDHMDRLPRDIAQERMH-------HDIVRLLDEYNLVRS 218 (223)
T ss_dssp -HHHHHHHH-TTCCTTCCCTTCCCHHHHHHHTTC-------HHHHHHHHHTTCSSC
T ss_pred -HHHHHHHH-cCCCCccccccCCCHHHHHHHhcc-------hHHHHHHHHcCCCcc
Confidence 99999999 499999999999999999999985 699999999998654
No 37
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=5.5e-34 Score=295.95 Aligned_cols=209 Identities=18% Similarity=0.132 Sum_probs=183.7
Q ss_pred hhhHHHHHHHHcCCHHHHHHHHccCCCcc---ccccCCCCChHHHHHHHcCCHHHHHHHHHHhhhhccccccccCCCCCc
Q 004286 9 QLKKGLFKSAMKGKWNEVVENYGKDDRIH---EARITRSGGTALHIAVSDGQEEIVEDLVRIIHEKQQLKVLKIGDERGS 85 (763)
Q Consensus 9 ~~~~~L~~aa~~g~~~~v~~lL~~~~~~~---~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~d~~g~ 85 (763)
...+|||.||..|+.+.++.|+.. +.+ ++..|..|+||||+||..|+.+++++|+++| ++++.+|..|+
T Consensus 8 ~g~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g------a~~~~~~~~g~ 79 (282)
T 1oy3_D 8 DGDTALHLAVIHQHEPFLDFLLGF--SAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAG------AGVLVAERGGH 79 (282)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHH--HTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTT------CCSSCCCTTSC
T ss_pred CCCcHHHHHHHcCCHHHHHHHHhc--CCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcC------CCCCCCCCCCC
Confidence 457899999999999999999987 454 7888999999999999999999999999998 77899999999
Q ss_pred hHHHHHHHcCCHHHHHHHHhcCCC----------------------------------------------ccCCCCCCCC
Q 004286 86 TPLHIAAGLGNVSMCKCIATADPR----------------------------------------------LIGERNHENE 119 (763)
Q Consensus 86 TpLh~Aa~~g~~~~v~~Ll~~~~~----------------------------------------------~~~~~~~~g~ 119 (763)
||||+|+..|+.+++++|+++++. .++.++..|.
T Consensus 80 tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 159 (282)
T 1oy3_D 80 TALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGH 159 (282)
T ss_dssp CHHHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSC
T ss_pred CHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCc
Confidence 999999999999999999998754 2677888999
Q ss_pred hHHHHHHHcCCHHHHHHHHHcCCCCCCCCccccCC-CCChHHHHHHHcCChHHHHHHHHHhccccccccccCCCcHHHHH
Q 004286 120 TPFFLAARHGHKDAFLCLHYLCASVDDGYNYSRRK-NGETILHYAISGYYFVDLAFQIIHLYEKLVNFVNERGVSPLHLL 198 (763)
Q Consensus 120 TpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~d~-~G~TpLh~A~~~g~~~~iv~~LL~~~~~~~~~~d~~G~TpLh~A 198 (763)
||||+|+..|+.+++++|+++|++++ .++. .|+||||+|+..|+. +++++|+++ |++++.+|..|.||||+|
T Consensus 160 t~L~~A~~~g~~~~v~~Ll~~g~~~~-----~~~~~~g~tpL~~A~~~~~~-~~v~~Ll~~-gad~~~~d~~g~tpL~~A 232 (282)
T 1oy3_D 160 TPLHVAVIHKDAEMVRLLRDAGADLN-----KPEPTCGRTPLHLAVEAQAA-SVLELLLKA-GADPTARMYGGRTPLGSA 232 (282)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHTCCTT-----CCCTTTCCCHHHHHHHTTCH-HHHHHHHHT-TCCTTCCCTTSCCHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCC-----CCCCCCCcCHHHHHHHcCCH-HHHHHHHHc-CCCCcccccCCCCHHHHH
Confidence 99999999999999999999999998 6775 499999999999999 999999995 999999999999999999
Q ss_pred hcCCCCccCCchHHHHHHHHHcCCCCCccccccccccchhhhccccCCCCccHHH
Q 004286 199 ATKPNAFRSGSHLGLCTGIIYHCISVDKLQEETSYDQHLFTTIKKQTNYPENYET 253 (763)
Q Consensus 199 ~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 253 (763)
+..++ .+++++|+++|++++..+.. +.+|++++.
T Consensus 233 ~~~~~-------~~~v~~Ll~~ga~~~~~~~~--------------g~tpl~~a~ 266 (282)
T 1oy3_D 233 LLRPN-------PILARLLRAHGAPEPEDGGD--------------KLSPCSSSG 266 (282)
T ss_dssp HTSSC-------HHHHHHHHHTTCCCCCCC-------------------------
T ss_pred HHcCC-------cHHHHHHHHcCCCcCcCCCc--------------ccccccccC
Confidence 99985 79999999999999988844 678887764
No 38
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=3.7e-33 Score=282.13 Aligned_cols=194 Identities=21% Similarity=0.194 Sum_probs=177.1
Q ss_pred hhHHHHHHHHcCCHHHHHHHHccCCCccccccCCCCChHHHHHHHcCCHHHHHHHHHHhhhhcccccccc-CCCCCchHH
Q 004286 10 LKKGLFKSAMKGKWNEVVENYGKDDRIHEARITRSGGTALHIAVSDGQEEIVEDLVRIIHEKQQLKVLKI-GDERGSTPL 88 (763)
Q Consensus 10 ~~~~L~~aa~~g~~~~v~~lL~~~~~~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~-~d~~g~TpL 88 (763)
..++|+.|+..|+.+.++.++.. +++++..+..|.||||+|+..|+.+++++|+++|. +++. .+..|.|||
T Consensus 9 ~~~~l~~A~~~g~~~~~~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~------~~~~~~~~~~~t~L 80 (240)
T 3eu9_A 9 STWDIVKATQYGIYERCRELVEA--GYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGA------IVDQLGGDLNSTPL 80 (240)
T ss_dssp GGCCHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC------CTTCCBTTTTBCHH
T ss_pred cchHHHHHHHcCChHHHHHHHHc--CCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCC------cchhhcCCcCCChh
Confidence 46789999999999999999988 78999999999999999999999999999999984 3443 445699999
Q ss_pred HHHHHcCCHHHHHHHHhcCCCccCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCccccCCCCChHHHHHHHcCC
Q 004286 89 HIAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAARHGHKDAFLCLHYLCASVDDGYNYSRRKNGETILHYAISGYY 168 (763)
Q Consensus 89 h~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~d~~G~TpLh~A~~~g~ 168 (763)
|+|+..|+.+++++|++.|++ ++.++..|.||||+|+..|+.+++++|+++|++++ .+|..|.||||+|+..++
T Consensus 81 ~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~-----~~~~~g~t~l~~a~~~~~ 154 (240)
T 3eu9_A 81 HWATRQGHLSMVVQLMKYGAD-PSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVD-----MMDQNGMTPLMWAAYRTH 154 (240)
T ss_dssp HHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-----CCCTTSCCHHHHHHHHCC
T ss_pred HHHHHcCCHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCcc-----ccCCCCCcHHHHHHHhCC
Confidence 999999999999999999998 89999999999999999999999999999999998 899999999999997776
Q ss_pred -hHHHHHHHHHhcccccccccc-CCCcHHHHHhcCCCCccCCchHHHHHHHHHcCCCCCc
Q 004286 169 -FVDLAFQIIHLYEKLVNFVNE-RGVSPLHLLATKPNAFRSGSHLGLCTGIIYHCISVDK 226 (763)
Q Consensus 169 -~~~iv~~LL~~~~~~~~~~d~-~G~TpLh~A~~~~~~~~~~~~~~iv~~Ll~~ga~~~~ 226 (763)
. +++++|++ .+++++..+. .|.||||+|+..++ .+++++|+++|++++.
T Consensus 155 ~~-~~~~~L~~-~~~~~~~~~~~~g~t~L~~A~~~~~-------~~~v~~Ll~~g~~~~~ 205 (240)
T 3eu9_A 155 SV-DPTRLLLT-FNVSVNLGDKYHKNTALHWAVLAGN-------TTVISLLLEAGANVDA 205 (240)
T ss_dssp SS-TTHHHHHH-TTCCTTCCCTTTCCCHHHHHHHHTC-------HHHHHHHHHHTCCTTC
T ss_pred hH-HHHHHHHh-cCCCcchhhccCCCcHHHHHHHcCC-------HHHHHHHHHcCCCCCC
Confidence 6 88999998 5999999997 99999999999985 6899999988887763
No 39
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=7.9e-34 Score=297.63 Aligned_cols=154 Identities=17% Similarity=0.120 Sum_probs=115.8
Q ss_pred HHHHcCCHHHHHHHHHHhhhhccc---cccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCccCCCCCCCChHHHHHHH
Q 004286 51 IAVSDGQEEIVEDLVRIIHEKQQL---KVLKIGDERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAAR 127 (763)
Q Consensus 51 ~A~~~g~~~~v~~Ll~~g~~~~~~---~~~~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~TpLh~A~~ 127 (763)
.++..++.+.++.++....+.... ......+..|.||||+|+..|+.++++.|+++|++ ++.+|..|.||||+|+.
T Consensus 4 ~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~ 82 (299)
T 1s70_B 4 ADAKQKRNEQLKRWIGSETDLEPPVVKRKKTKVKFDDGAVFLAACSSGDTEEVLRLLERGAD-INYANVDGLTALHQACI 82 (299)
T ss_dssp HHHHHHHHHHHHHHHHTTTSSCCSCCCCSCCCCEECHHHHHHHHHHHTCHHHHHHHHHHCCC-TTCBCTTCCBHHHHHHH
T ss_pred hHHHHHHHHHHHHHHccccccccccccCcccccccCCccHHHHHHHcCCHHHHHHHHHcCCC-CcccCCCCCCHHHHHHH
Confidence 355556666666666554321110 00112234677888888888888888888888887 88888888888888888
Q ss_pred cCCHHHHHHHHHcCCCCCCCCccccCCCCChHHHHHHHcCChHHHHHHHHHhccccccccccCCCcHHHHHhcCCCCccC
Q 004286 128 HGHKDAFLCLHYLCASVDDGYNYSRRKNGETILHYAISGYYFVDLAFQIIHLYEKLVNFVNERGVSPLHLLATKPNAFRS 207 (763)
Q Consensus 128 ~g~~~~v~~Ll~~ga~~~~~~~~~~d~~G~TpLh~A~~~g~~~~iv~~LL~~~~~~~~~~d~~G~TpLh~A~~~~~~~~~ 207 (763)
.|+.+++++|+++|++++ .+|..|.||||+|+..|+. +++++|++ .|++++..|.+|.||||+|+..+
T Consensus 83 ~g~~~~v~~Ll~~ga~~~-----~~~~~g~tpL~~A~~~g~~-~~v~~Ll~-~g~~~~~~~~~g~t~l~~A~~~~----- 150 (299)
T 1s70_B 83 DDNVDMVKFLVENGANIN-----QPDNEGWIPLHAAASCGYL-DIAEYLIS-QGAHVGAVNSEGDTPLDIAEEEA----- 150 (299)
T ss_dssp TTCHHHHHHHHHTTCCTT-----CCCTTSCCHHHHHHHHTCH-HHHHHHHH-TTCCTTCCCTTSCCHHHHCCSHH-----
T ss_pred cCCHHHHHHHHHCCCCCC-----CCCCCCCcHHHHHHHcCCH-HHHHHHHh-CCCCCCCcCCCCCCHHHHHHhcc-----
Confidence 888888888888888887 7888888888888888888 88888888 48888888888888888888765
Q ss_pred CchHHHHHHHHH
Q 004286 208 GSHLGLCTGIIY 219 (763)
Q Consensus 208 ~~~~~iv~~Ll~ 219 (763)
+.++++.++.
T Consensus 151 --~~~~~~~ll~ 160 (299)
T 1s70_B 151 --MEELLQNEVN 160 (299)
T ss_dssp --HHHHHHHHHH
T ss_pred --hHHHHHHHHh
Confidence 3566665554
No 40
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=1.7e-34 Score=291.68 Aligned_cols=82 Identities=10% Similarity=0.093 Sum_probs=61.1
Q ss_pred CCCcHHHHHHHcChHHHHHHHHHhCCccccccccCCCchhHHHHHcCChHHHHHHHhccchhhhhhccccCCCCchhhhH
Q 004286 455 KRETPILIAAKNGITEIVEKILKSFPVAILDMNSEKKNVMLLAVENRQRHVYQLLLKTAIIQETVFRKVDDQGNSALHLA 534 (763)
Q Consensus 455 ~G~tpLh~Aa~~g~~eiv~~LL~~~~~~~~~~d~~G~T~LH~A~~~~~~~iv~~Ll~~~~~~~~~~n~~D~~G~TpLH~A 534 (763)
.|.||||+|+..|+.++|++|++ .+.+++.+|..|+||||+|+.+|+.+++++|+++++. .....++.+|.||.+.+
T Consensus 150 ~g~tpL~~A~~~~~~~~v~~Ll~-~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~--~~~~~~~~~~~~~~~~~ 226 (236)
T 1ikn_D 150 NGRTALHLAVDLQNPDLVSLLLK-CGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLE--NLQMLPESEDEESYDTE 226 (236)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHT-TTCCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCG--GGSSCCCCCTTTCCCCC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHH-cCCCCCcccCCCCCHHHHHHccCchHHHHHHHHcchh--hhhcCCccchHHHHhhh
Confidence 47888888888888888888888 4666777888888888888888888888888888873 13456788888888887
Q ss_pred hhcCC
Q 004286 535 ATLGD 539 (763)
Q Consensus 535 a~~g~ 539 (763)
.....
T Consensus 227 ~~~~~ 231 (236)
T 1ikn_D 227 SEFTE 231 (236)
T ss_dssp -----
T ss_pred ccccc
Confidence 76544
No 41
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=1.5e-34 Score=292.07 Aligned_cols=176 Identities=22% Similarity=0.310 Sum_probs=149.8
Q ss_pred cccCCCCChHHHHHHHcCCHHHHHHHHHHhhhhccccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCccCCCCCCC
Q 004286 39 ARITRSGGTALHIAVSDGQEEIVEDLVRIIHEKQQLKVLKIGDERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHEN 118 (763)
Q Consensus 39 ~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g 118 (763)
+.+|.+|+||||+|+..|+.+++++|++.+.. .+++++.+|..|+||||+|+..|+.+++++|+++|++ ++.+|..|
T Consensus 2 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~--~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g 78 (236)
T 1ikn_D 2 QQLTEDGDSFLHLAIIHEEKALTMEVIRQVKG--DLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCD-PELRDFRG 78 (236)
T ss_dssp -----CCCCTTHHHHHTTCSSSSSCCCC-------CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCC-SCCCCTTC
T ss_pred CcCCCCCCchhHHHHHcCChhHHHHHHHHhhc--cHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCC
Confidence 35688999999999999999999999998753 2246899999999999999999999999999999998 89999999
Q ss_pred ChHHHHHHHcCCHHHHHHHHHcCCCCCC-CCccccCCCCChHHHHHHHcCChHHHHHHHHHhcccccccccc-CCCcHHH
Q 004286 119 ETPFFLAARHGHKDAFLCLHYLCASVDD-GYNYSRRKNGETILHYAISGYYFVDLAFQIIHLYEKLVNFVNE-RGVSPLH 196 (763)
Q Consensus 119 ~TpLh~A~~~g~~~~v~~Ll~~ga~~~~-~~~~~~d~~G~TpLh~A~~~g~~~~iv~~LL~~~~~~~~~~d~-~G~TpLh 196 (763)
.||||+|+..|+.+++++|+++|++++. ...+..|..|.||||+|+..|+. +++++|++. |++++.++. .|.||||
T Consensus 79 ~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~-g~~~~~~~~~~g~tpL~ 156 (236)
T 1ikn_D 79 NTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYL-GIVELLVSL-GADVNAQEPCNGRTALH 156 (236)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCH-HHHHHHHHH-TCCTTCCCTTTCCCHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCH-HHHHHHHHc-CCCCCCCCCCCCCCHHH
Confidence 9999999999999999999999987431 12347888999999999999999 999999994 999999998 9999999
Q ss_pred HHhcCCCCccCCchHHHHHHHHHcCCCCCc
Q 004286 197 LLATKPNAFRSGSHLGLCTGIIYHCISVDK 226 (763)
Q Consensus 197 ~A~~~~~~~~~~~~~~iv~~Ll~~ga~~~~ 226 (763)
+|+..++ .+++++|+++|++++.
T Consensus 157 ~A~~~~~-------~~~v~~Ll~~ga~~~~ 179 (236)
T 1ikn_D 157 LAVDLQN-------PDLVSLLLKCGADVNR 179 (236)
T ss_dssp HHHHTTC-------HHHHHHHHTTTCCSCC
T ss_pred HHHHcCC-------HHHHHHHHHcCCCCCc
Confidence 9999985 6888888888877763
No 42
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=1e-32 Score=277.85 Aligned_cols=167 Identities=19% Similarity=0.152 Sum_probs=145.3
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHH-hhhhccccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCcc----CCCCCCC
Q 004286 44 SGGTALHIAVSDGQEEIVEDLVRI-IHEKQQLKVLKIGDERGSTPLHIAAGLGNVSMCKCIATADPRLI----GERNHEN 118 (763)
Q Consensus 44 ~g~TpLh~A~~~g~~~~v~~Ll~~-g~~~~~~~~~~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~----~~~~~~g 118 (763)
.|+||||+|+..|+.++++.|++. | ++++.+|..|+||||+|+..|+.+++++|++++++.. +.+|..|
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g------~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g 75 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFEG------CEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEG 75 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTTC------SCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcC------CCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCC
Confidence 589999999999999999999997 5 7799999999999999999999999999999998732 6678899
Q ss_pred ChHHHHHHHcCCHHHHHHHHHcCCCCCCCC--------ccccCCCCChHHHHHHHcCChHHHHHHHHHhccccccccccC
Q 004286 119 ETPFFLAARHGHKDAFLCLHYLCASVDDGY--------NYSRRKNGETILHYAISGYYFVDLAFQIIHLYEKLVNFVNER 190 (763)
Q Consensus 119 ~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~~--------~~~~d~~G~TpLh~A~~~g~~~~iv~~LL~~~~~~~~~~d~~ 190 (763)
.||||+|+..|+.+++++|+++|++++..+ .+..|..|.||||+|+..|+. +++++|++ .|++++.+|.+
T Consensus 76 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~-~ga~~~~~d~~ 153 (232)
T 2rfa_A 76 QTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSE-EIVRLLIE-HGADIRAQDSL 153 (232)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCH-HHHHHHHH-TTCCTTCCCTT
T ss_pred cCHHHHHHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCH-HHHHHHHH-CCCCCCCCCCC
Confidence 999999999999999999999999998211 011234899999999999999 99999999 59999999999
Q ss_pred CCcHHHHHhcCCCCccCCchHHHH----HHHHHcCCCCC
Q 004286 191 GVSPLHLLATKPNAFRSGSHLGLC----TGIIYHCISVD 225 (763)
Q Consensus 191 G~TpLh~A~~~~~~~~~~~~~~iv----~~Ll~~ga~~~ 225 (763)
|.||||+|+..++ .+++ ++|+++|++++
T Consensus 154 g~t~L~~A~~~~~-------~~~~~~i~~~Ll~~g~~~~ 185 (232)
T 2rfa_A 154 GNTVLHILILQPN-------KTFACQMYNLLLSYDGGDH 185 (232)
T ss_dssp SCCHHHHHHTCSC-------HHHHHHHHHHHHHTTCSCS
T ss_pred CCCHHHHHHHcCC-------hHHHHHHHHHHHhcCCchh
Confidence 9999999999985 4555 66666665543
No 43
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=6.8e-33 Score=263.18 Aligned_cols=159 Identities=25% Similarity=0.297 Sum_probs=122.7
Q ss_pred hHHHHHHHcCCHHHHHHHHHHhhhhccccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCccCCCCCCCChHHHHHH
Q 004286 47 TALHIAVSDGQEEIVEDLVRIIHEKQQLKVLKIGDERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAA 126 (763)
Q Consensus 47 TpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~TpLh~A~ 126 (763)
++|+.||+.|+.++|+.||++| +++|.+|.+|+||||+|+..|+.+++++|+++|++ ++.+|.+|+||||+|+
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~G------advn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad-~~~~d~~g~TpLh~A~ 78 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENG------ADVNASDSDGRTPLHHAAENGHKEVVKLLISKGAD-VNAKDSDGRTPLHHAA 78 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTT------CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHCC------CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccc-hhhhccCCCCHHHHHH
Confidence 4677888888888888888877 66777888888888888888888888888888877 7788888888888888
Q ss_pred HcCCHHHHHHHHHcCCCCCCCCccccCCCCChHHHHHHHcCChHHHHHHHHHhccccccccccCCCcHHHHHhcCCCCcc
Q 004286 127 RHGHKDAFLCLHYLCASVDDGYNYSRRKNGETILHYAISGYYFVDLAFQIIHLYEKLVNFVNERGVSPLHLLATKPNAFR 206 (763)
Q Consensus 127 ~~g~~~~v~~Ll~~ga~~~~~~~~~~d~~G~TpLh~A~~~g~~~~iv~~LL~~~~~~~~~~d~~G~TpLh~A~~~~~~~~ 206 (763)
..|+.+++++|+++|++++ .+|.+|+||||+|+..|+. +++++|++ .|++++.+|.+|+||||+|+..++
T Consensus 79 ~~g~~~~v~~Ll~~gadvn-----~~d~~G~TpLh~A~~~g~~-~~v~~Ll~-~gad~~~~d~~G~TpL~~A~~~g~--- 148 (169)
T 4gpm_A 79 ENGHKEVVKLLISKGADVN-----AKDSDGRTPLHHAAENGHK-EVVKLLIS-KGADVNTSDSDGRTPLDLAREHGN--- 148 (169)
T ss_dssp HTTCHHHHHHHHHTTCCTT-----CCCTTSCCHHHHHHHTTCH-HHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTC---
T ss_pred HcCCHHHHHHHHHCcCCCC-----CCCCCCCCHHHHHHHcCCH-HHHHHHHH-cCCCccccCCCCCCHHHHHHHcCC---
Confidence 8888888888888888777 7788888888888888888 88888887 477888888888888888888774
Q ss_pred CCchHHHHHHHHHcCCCCCc
Q 004286 207 SGSHLGLCTGIIYHCISVDK 226 (763)
Q Consensus 207 ~~~~~~iv~~Ll~~ga~~~~ 226 (763)
.+++++|+++||+++.
T Consensus 149 ----~~iv~~Ll~~GA~ie~ 164 (169)
T 4gpm_A 149 ----EEVVKLLEKQGGWLEH 164 (169)
T ss_dssp ----HHHHHHHHTC------
T ss_pred ----HHHHHHHHHCCCCcCC
Confidence 5888888888887764
No 44
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=1.4e-32 Score=276.75 Aligned_cols=201 Identities=20% Similarity=0.196 Sum_probs=179.3
Q ss_pred hHHHHHHHHcCCHHHHHHHHccCCCccccccCCCCChHHHHHHHcCCHHHHHHHHHHhhhhccccccccCCCCCchHHHH
Q 004286 11 KKGLFKSAMKGKWNEVVENYGKDDRIHEARITRSGGTALHIAVSDGQEEIVEDLVRIIHEKQQLKVLKIGDERGSTPLHI 90 (763)
Q Consensus 11 ~~~L~~aa~~g~~~~v~~lL~~~~~~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~d~~g~TpLh~ 90 (763)
.+|||.|+..|+.+.++.++... +++++..|..|+||||+||..|+.+++++|+++|++... ...+.+|..|+||||+
T Consensus 4 ~t~L~~A~~~g~~~~v~~Ll~~~-g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~-~~~~~~~~~g~t~L~~ 81 (232)
T 2rfa_A 4 ESPLLLAAKENDVQALSKLLKFE-GCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVF-EPMTSELYEGQTALHI 81 (232)
T ss_dssp TCHHHHHHHTTCHHHHHHHHTTT-CSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGG-CCCCSTTTTTCCHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHhc-CCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhcc-ccccccCCCCcCHHHH
Confidence 68999999999999999999864 788999999999999999999999999999999864321 1236788899999999
Q ss_pred HHHcCCHHHHHHHHhcCCCccCCCCC-------------CCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCccccCCCCC
Q 004286 91 AAGLGNVSMCKCIATADPRLIGERNH-------------ENETPFFLAARHGHKDAFLCLHYLCASVDDGYNYSRRKNGE 157 (763)
Q Consensus 91 Aa~~g~~~~v~~Ll~~~~~~~~~~~~-------------~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~d~~G~ 157 (763)
|+..|+.+++++|+++|++ ++.++. .|.||||+|+..|+.+++++|+++|++++ .+|..|+
T Consensus 82 A~~~~~~~~v~~Ll~~g~~-~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-----~~d~~g~ 155 (232)
T 2rfa_A 82 AVINQNVNLVRALLARGAS-VSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIR-----AQDSLGN 155 (232)
T ss_dssp HHHTTCHHHHHHHHHTTCC-TTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTT-----CCCTTSC
T ss_pred HHHcCCHHHHHHHHhCCCC-CCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCC-----CCCCCCC
Confidence 9999999999999999998 777765 79999999999999999999999999999 8999999
Q ss_pred hHHHHHHHcCChHHHH----HHHHHhccccc------cccccCCCcHHHHHhcCCCCccCCchHHHHHHHHHcCCCCCcc
Q 004286 158 TILHYAISGYYFVDLA----FQIIHLYEKLV------NFVNERGVSPLHLLATKPNAFRSGSHLGLCTGIIYHCISVDKL 227 (763)
Q Consensus 158 TpLh~A~~~g~~~~iv----~~LL~~~~~~~------~~~d~~G~TpLh~A~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~ 227 (763)
||||+|+..|+. +++ ++|++ .|+++ +.+|..|.||||+|+..|+ .+++++|+++|.+....
T Consensus 156 t~L~~A~~~~~~-~~~~~i~~~Ll~-~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~-------~~~v~~Ll~~g~~~~~~ 226 (232)
T 2rfa_A 156 TVLHILILQPNK-TFACQMYNLLLS-YDGGDHLKSLELVPNNQGLTPFKLAGVEGN-------IVMFQHLMQKRKHIAAA 226 (232)
T ss_dssp CHHHHHHTCSCH-HHHHHHHHHHHH-TTCSCSSCCGGGCCCTTSCCHHHHHHHHTC-------HHHHHHHHHHHHHC---
T ss_pred CHHHHHHHcCCh-HHHHHHHHHHHh-cCCchhhhhhhccCCCCCCCHHHHHHHcCC-------HHHHHHHHhcCccchhh
Confidence 999999999999 988 99998 58777 6899999999999999985 79999999999877644
Q ss_pred c
Q 004286 228 Q 228 (763)
Q Consensus 228 ~ 228 (763)
.
T Consensus 227 ~ 227 (232)
T 2rfa_A 227 H 227 (232)
T ss_dssp -
T ss_pred h
Confidence 3
No 45
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=2.8e-32 Score=267.95 Aligned_cols=191 Identities=16% Similarity=0.143 Sum_probs=178.8
Q ss_pred hhHHHHHHHHcCCHHHHHHHHccCCCccccccCCCCChHHHHHHHcCCHHHHHHHHHHhhhhccccccccCCCCCchHHH
Q 004286 10 LKKGLFKSAMKGKWNEVVENYGKDDRIHEARITRSGGTALHIAVSDGQEEIVEDLVRIIHEKQQLKVLKIGDERGSTPLH 89 (763)
Q Consensus 10 ~~~~L~~aa~~g~~~~v~~lL~~~~~~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~d~~g~TpLh 89 (763)
..++||.||..|+.+.++.+|... +.+++..|..|+||||+|+..|+.+++++|+++| ++++.+|..|+||||
T Consensus 5 ~~~~L~~A~~~g~~~~v~~ll~~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g------~~~~~~~~~g~t~l~ 77 (201)
T 3hra_A 5 EVGALLEAANQRDTKKVKEILQDT-TYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRG------ADINLQNSISDSPYL 77 (201)
T ss_dssp CTTHHHHHHHTTCHHHHHHHHTCT-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT------CCTTCCCTTSCCHHH
T ss_pred cccHHHHHHHhccHHHHHHHHHcC-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC------CCCCCCCCCCCCHHH
Confidence 467999999999999999999874 5588999999999999999999999999999998 778999999999999
Q ss_pred HHHHcCCHHHHHHHHhcCCCccCCCCCCCChHHHHHHHcCCHHHHHHHHHcC-CCCCCCCccccCCCCChHHHHHHHcCC
Q 004286 90 IAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAARHGHKDAFLCLHYLC-ASVDDGYNYSRRKNGETILHYAISGYY 168 (763)
Q Consensus 90 ~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~g-a~~~~~~~~~~d~~G~TpLh~A~~~g~ 168 (763)
+|+..|+.+++++|++.+...++.+|..|.||||+|+..|+.+++++|+++| ++++ .+|..|.||||+|+..++
T Consensus 78 ~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-----~~~~~g~t~L~~A~~~~~ 152 (201)
T 3hra_A 78 YAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDID-----FQNDFGYTALIEAVGLRE 152 (201)
T ss_dssp HHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTT-----CCCTTSCCHHHHHHHSSC
T ss_pred HHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcC-----CCCCCCCCHHHHHHHhcc
Confidence 9999999999999996666559999999999999999999999999999999 8888 899999999999999998
Q ss_pred -----hHHHHHHHHHhccccccccccCCCcHHHHHhcCCCCccCCchHHHHHHHHHcC
Q 004286 169 -----FVDLAFQIIHLYEKLVNFVNERGVSPLHLLATKPNAFRSGSHLGLCTGIIYHC 221 (763)
Q Consensus 169 -----~~~iv~~LL~~~~~~~~~~d~~G~TpLh~A~~~~~~~~~~~~~~iv~~Ll~~g 221 (763)
. +++++|++ .|++++.+|.+|.||||+|+..++ .+++++|+++|
T Consensus 153 ~~~~~~-~~v~~Ll~-~ga~~~~~~~~g~t~l~~A~~~~~-------~~~~~~Ll~~G 201 (201)
T 3hra_A 153 GNQLYQ-DIVKLLME-NGADQSIKDNSGRTAMDYANQKGY-------TEISKILAQYN 201 (201)
T ss_dssp CSHHHH-HHHHHHHH-TTCCTTCCCTTSCCHHHHHHHHTC-------HHHHHHHHTCC
T ss_pred chhhHH-HHHHHHHH-CCCCCCccCCCCCCHHHHHHHcCC-------HhHHHHHHhcC
Confidence 8 99999999 599999999999999999999985 69999999887
No 46
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=2.1e-32 Score=259.74 Aligned_cols=163 Identities=24% Similarity=0.299 Sum_probs=151.4
Q ss_pred hhhhHHHHHHHHcCCHHHHHHHHccCCCccccccCCCCChHHHHHHHcCCHHHHHHHHHHhhhhccccccccCCCCCchH
Q 004286 8 DQLKKGLFKSAMKGKWNEVVENYGKDDRIHEARITRSGGTALHIAVSDGQEEIVEDLVRIIHEKQQLKVLKIGDERGSTP 87 (763)
Q Consensus 8 ~~~~~~L~~aa~~g~~~~v~~lL~~~~~~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~d~~g~Tp 87 (763)
.+++++|+.||..|+.+.|+.||+. |++++.+|..|+||||+|+..|+.+++++|+++| ++++.+|.+|+||
T Consensus 2 sdlg~~L~~Aa~~G~~~~v~~Ll~~--Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~g------ad~~~~d~~g~Tp 73 (169)
T 4gpm_A 2 SELGKRLIEAAENGNKDRVKDLIEN--GADVNASDSDGRTPLHHAAENGHKEVVKLLISKG------ADVNAKDSDGRTP 73 (169)
T ss_dssp CHHHHHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT------CCTTCCCTTSCCH
T ss_pred CHHHHHHHHHHHcCCHHHHHHHHHC--CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcc------cchhhhccCCCCH
Confidence 3567899999999999999999998 8999999999999999999999999999999998 7799999999999
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCccCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCccccCCCCChHHHHHHHcC
Q 004286 88 LHIAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAARHGHKDAFLCLHYLCASVDDGYNYSRRKNGETILHYAISGY 167 (763)
Q Consensus 88 Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~d~~G~TpLh~A~~~g 167 (763)
||+|+..|+.+++++|+++|++ +|.+|.+|+||||+|+..|+.+++++|+++|++++ .+|.+|+||||+|+.+|
T Consensus 74 Lh~A~~~g~~~~v~~Ll~~gad-vn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~-----~~d~~G~TpL~~A~~~g 147 (169)
T 4gpm_A 74 LHHAAENGHKEVVKLLISKGAD-VNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVN-----TSDSDGRTPLDLAREHG 147 (169)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-----CCCTTSCCHHHHHHHTT
T ss_pred HHHHHHcCCHHHHHHHHHCcCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc-----ccCCCCCCHHHHHHHcC
Confidence 9999999999999999999999 99999999999999999999999999999999999 89999999999999999
Q ss_pred ChHHHHHHHHHhccccccc
Q 004286 168 YFVDLAFQIIHLYEKLVNF 186 (763)
Q Consensus 168 ~~~~iv~~LL~~~~~~~~~ 186 (763)
+. +++++|++ .|++++.
T Consensus 148 ~~-~iv~~Ll~-~GA~ie~ 164 (169)
T 4gpm_A 148 NE-EVVKLLEK-QGGWLEH 164 (169)
T ss_dssp CH-HHHHHHHT-C------
T ss_pred CH-HHHHHHHH-CCCCcCC
Confidence 99 99999999 5988764
No 47
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=9.3e-32 Score=264.26 Aligned_cols=147 Identities=17% Similarity=0.210 Sum_probs=74.2
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHHhhhhccccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCccCCCCCCCChHHH
Q 004286 44 SGGTALHIAVSDGQEEIVEDLVRIIHEKQQLKVLKIGDERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETPFF 123 (763)
Q Consensus 44 ~g~TpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~TpLh 123 (763)
.+.||||.|+..|+.+.++.|++.+. .+++.+|..|+||||+|+..|+.+++++|+++|++ ++.+|..|.||||
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~ll~~~~-----~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~l~ 77 (201)
T 3hra_A 4 YEVGALLEAANQRDTKKVKEILQDTT-----YQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGAD-INLQNSISDSPYL 77 (201)
T ss_dssp CCTTHHHHHHHTTCHHHHHHHHTCTT-----CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHH
T ss_pred ccccHHHHHHHhccHHHHHHHHHcCC-----CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCCHHH
Confidence 44555555555555555555554431 24445555555555555555555555555555554 4555555555555
Q ss_pred HHHHcCCHHHHHHHH-HcCCCCCCCCccccCCCCChHHHHHHHcCChHHHHHHHHHhccccccccccCCCcHHHHHhcCC
Q 004286 124 LAARHGHKDAFLCLH-YLCASVDDGYNYSRRKNGETILHYAISGYYFVDLAFQIIHLYEKLVNFVNERGVSPLHLLATKP 202 (763)
Q Consensus 124 ~A~~~g~~~~v~~Ll-~~ga~~~~~~~~~~d~~G~TpLh~A~~~g~~~~iv~~LL~~~~~~~~~~d~~G~TpLh~A~~~~ 202 (763)
+|+..|+.+++++|+ ..+++++ ..|..|.||||+|+..|+. +++++|++..+++++.+|..|.||||+|+..+
T Consensus 78 ~A~~~~~~~~~~~Ll~~~~~~~~-----~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~ 151 (201)
T 3hra_A 78 YAGAQGRTEILAYMLKHATPDLN-----KHNRYGGNALIPAAEKGHI-DNVKLLLEDGREDIDFQNDFGYTALIEAVGLR 151 (201)
T ss_dssp HHHHTTCHHHHHHHHHHSCCCTT-----CCCTTSCCSHHHHHHTTCH-HHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSS
T ss_pred HHHHcCCHHHHHHHHhccCcccc-----cccCCCCcHHHHHHHcCCH-HHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhc
Confidence 555555555555555 2333444 4455555555555555555 55555555322455555555555555555443
No 48
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=100.00 E-value=3.5e-33 Score=288.66 Aligned_cols=161 Identities=16% Similarity=0.118 Sum_probs=135.5
Q ss_pred CccccccCCCCChHHHHHHHcCCHHHHHHHHHHhhhhccccccc----cCCCCCchHHHHHHHc---CCHHHHHHHHhcC
Q 004286 35 RIHEARITRSGGTALHIAVSDGQEEIVEDLVRIIHEKQQLKVLK----IGDERGSTPLHIAAGL---GNVSMCKCIATAD 107 (763)
Q Consensus 35 ~~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~----~~d~~g~TpLh~Aa~~---g~~~~v~~Ll~~~ 107 (763)
++..+..|..|+||||+||..|+.++|+.|++.+.+.. .+++ .+|..|+||||+|+.. |+.+++++|+++|
T Consensus 3 ~a~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~--~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~g 80 (273)
T 2pnn_A 3 SAGEKPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSK--KRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVA 80 (273)
T ss_dssp --------CCCHHHHHHHHHTTCSSTTTTHHHHHHHSC--CCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHH
T ss_pred cccCCCCCcccchHHHHHHHcCCHHHHHHHHHHHhhcc--cccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhh
Confidence 34556689999999999999999999999999876532 3333 4588999999999987 9999999999997
Q ss_pred CCc------cC----CCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCccccCC--------------CCChHHHHH
Q 004286 108 PRL------IG----ERNHENETPFFLAARHGHKDAFLCLHYLCASVDDGYNYSRRK--------------NGETILHYA 163 (763)
Q Consensus 108 ~~~------~~----~~~~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~d~--------------~G~TpLh~A 163 (763)
++. ++ .+|..|.||||+|+..|+.+++++|+++|++++ .++. .|.||||+|
T Consensus 81 a~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~-----~~~~~~~~~~~~~~~~~~~g~tpL~~A 155 (273)
T 2pnn_A 81 RKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQ-----AAANGDFFKKTKGRPGFYFGELPLSLA 155 (273)
T ss_dssp HHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTT-----CCBCSGGGSSCSSSCCCCSCBSHHHHH
T ss_pred ccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcC-----ccccccccccccccccccCCCCHHHHH
Confidence 641 22 267799999999999999999999999999998 6665 799999999
Q ss_pred HHcCChHHHHHHHHHh--ccccccccccCCCcHHHHHhcCCC
Q 004286 164 ISGYYFVDLAFQIIHL--YEKLVNFVNERGVSPLHLLATKPN 203 (763)
Q Consensus 164 ~~~g~~~~iv~~LL~~--~~~~~~~~d~~G~TpLh~A~~~~~ 203 (763)
+..|+. +++++|++. .|++++.+|.+|.||||+|+..++
T Consensus 156 ~~~g~~-~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~ 196 (273)
T 2pnn_A 156 ACTNQL-AIVKFLLQNSWQPADISARDSVGNTVLHALVEVAD 196 (273)
T ss_dssp HHTTCH-HHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCC
T ss_pred HHcCCH-HHHHHHHhcccCCCCceeeCCCCCcHHHHHHHccC
Confidence 999999 999999994 599999999999999999999764
No 49
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.98 E-value=5.4e-33 Score=294.89 Aligned_cols=147 Identities=16% Similarity=0.105 Sum_probs=120.7
Q ss_pred CCHHHHHHHHccCCCccccc-----------------cCCCCChHHHHHHHcCCHHHHHHHHHHhhhhcccccccc-CCC
Q 004286 21 GKWNEVVENYGKDDRIHEAR-----------------ITRSGGTALHIAVSDGQEEIVEDLVRIIHEKQQLKVLKI-GDE 82 (763)
Q Consensus 21 g~~~~v~~lL~~~~~~~~~~-----------------~d~~g~TpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~-~d~ 82 (763)
|+.+.|+.||.+ +++++. ......+.+|.|+..+..+++++|++.| +++|. +|.
T Consensus 58 g~~~~v~~Ll~~--g~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~g------~dvn~~~d~ 129 (327)
T 1sw6_A 58 EQKMKLEAFLQR--LLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLLQEVNDAFPNTQ------LNLNIPVDE 129 (327)
T ss_dssp HHHHHHHHHHHH--HHC-------------------------------CHHHHHHHHHHHCTTSC------CCSCSCCST
T ss_pred chhHHHHHHHHh--ccCCccccchHhhhcccccccccccCCccchhHHHHHhhHHHHHHHHHhcC------CCcccccCC
Confidence 888888888887 665443 1112223458888888889999999887 77999 899
Q ss_pred CCchHHHHHHHcCCHHHHHHHHhcCCCccCCCCCCCChHHHHHHHcCC---HHHHHHHHHcC-CCCCCCCccccCCCCCh
Q 004286 83 RGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAARHGH---KDAFLCLHYLC-ASVDDGYNYSRRKNGET 158 (763)
Q Consensus 83 ~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~TpLh~A~~~g~---~~~v~~Ll~~g-a~~~~~~~~~~d~~G~T 158 (763)
.|+||||+|+..|+.++|++|+++|++ ++.+|..|+||||+|+..|+ .++++.|++.+ ++++ .+|..|+|
T Consensus 130 ~g~TpLh~Aa~~g~~~~v~~Ll~~Gad-~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~-----~~d~~g~t 203 (327)
T 1sw6_A 130 HGNTPLHWLTSIANLELVKHLVKHGSN-RLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLI-----LEDSMNRT 203 (327)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTTCC-TTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGG-----EECTTCCC
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhcccc-----CCCCCCCC
Confidence 999999999999999999999999999 99999999999999999999 78888898887 6666 89999999
Q ss_pred HHHHHHH----cCChHHHHHHHHHhcccc
Q 004286 159 ILHYAIS----GYYFVDLAFQIIHLYEKL 183 (763)
Q Consensus 159 pLh~A~~----~g~~~~iv~~LL~~~~~~ 183 (763)
|||+|+. .|+. +++++|++. ++.
T Consensus 204 pLh~A~~~~~~~g~~-~~v~~Ll~~-~~~ 230 (327)
T 1sw6_A 204 ILHHIIITSGMTGCS-AAAKYYLDI-LMG 230 (327)
T ss_dssp HHHHHHHHHTSTTCH-HHHHHHHHH-HHH
T ss_pred HHHHHHHHccccccH-HHHHHHHHH-HHH
Confidence 9999999 8999 999999985 443
No 50
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.97 E-value=1.4e-31 Score=273.84 Aligned_cols=198 Identities=20% Similarity=0.204 Sum_probs=175.1
Q ss_pred hHHHHHHHHcCCHHHHHHH----HccCCCccccc----cCCCCChHHHHHHHc---CCHHHHHHHHHHhhhhccc-----
Q 004286 11 KKGLFKSAMKGKWNEVVEN----YGKDDRIHEAR----ITRSGGTALHIAVSD---GQEEIVEDLVRIIHEKQQL----- 74 (763)
Q Consensus 11 ~~~L~~aa~~g~~~~v~~l----L~~~~~~~~~~----~d~~g~TpLh~A~~~---g~~~~v~~Ll~~g~~~~~~----- 74 (763)
.++||.||..|+.+.++.+ +.. +++++. .|..|+||||+||.. |+.+++++|++.|++.+..
T Consensus 3 ~t~L~~A~~~g~~~~v~~ll~~l~~~--g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~ 80 (256)
T 2etb_A 3 RDRLFSVVSRGVPEELTGLLEYLRWN--SKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVN 80 (256)
T ss_dssp HHHHHHHHHHTCGGGGTTHHHHHHHH--TCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGG
T ss_pred ccHHHHHHHcCCHHHHHHHHHHHHHc--CCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcc
Confidence 6899999999999855433 334 788887 899999999999999 9999999999999764311
Q ss_pred cccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCccCCCCCC-------------CChHHHHHHHcCCHHHHHHHHH--
Q 004286 75 KVLKIGDERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHE-------------NETPFFLAARHGHKDAFLCLHY-- 139 (763)
Q Consensus 75 ~~~~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~-------------g~TpLh~A~~~g~~~~v~~Ll~-- 139 (763)
.....+|..|+||||+|+..|+.+++++|+++|++ ++.++.. |.||||+|+..|+.+++++|++
T Consensus 81 ~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~ 159 (256)
T 2etb_A 81 AQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGAD-VHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENP 159 (256)
T ss_dssp CCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCS
T ss_pred cccccccccCCCHHHHHHHcCCHHHHHHHHHcCCC-CCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 11223457899999999999999999999999998 8988886 9999999999999999999999
Q ss_pred -cCCCCCCCCccccCCCCChHHHHHHH--cCChHH-------HHHHHHHhccccc-------cccccCCCcHHHHHhcCC
Q 004286 140 -LCASVDDGYNYSRRKNGETILHYAIS--GYYFVD-------LAFQIIHLYEKLV-------NFVNERGVSPLHLLATKP 202 (763)
Q Consensus 140 -~ga~~~~~~~~~~d~~G~TpLh~A~~--~g~~~~-------iv~~LL~~~~~~~-------~~~d~~G~TpLh~A~~~~ 202 (763)
+|++++ .+|.+|+||||+|+. .++. + ++++|++. |+++ +.+|..|.||||+|+..|
T Consensus 160 ~~ga~~n-----~~d~~g~TpLh~A~~~~~~~~-~~~~~~~~iv~~Ll~~-ga~~~~~~~~~~~~d~~g~tpL~~A~~~g 232 (256)
T 2etb_A 160 HQPASLE-----ATDSLGNTVLHALVMIADNSP-ENSALVIHMYDGLLQM-GARLCPTVQLEEISNHQGLTPLKLAAKEG 232 (256)
T ss_dssp SCCCCTT-----CCCTTSCCHHHHHHHHCCSCH-HHHHHHHHHHHHHHHH-HHHHSTTCCGGGCCCTTSCCHHHHHHHTT
T ss_pred ccCCCcC-----ccCCCCCCHHHHHHHcccCCc-hhhHHHHHHHHHHHHc-CCCcccccccccccCCCCCCHHHHHHHhC
Confidence 999999 899999999999999 8888 8 99999995 9999 999999999999999999
Q ss_pred CCccCCchHHHHHHHHHcCCCCC
Q 004286 203 NAFRSGSHLGLCTGIIYHCISVD 225 (763)
Q Consensus 203 ~~~~~~~~~~iv~~Ll~~ga~~~ 225 (763)
+ .+++++|+++|++..
T Consensus 233 ~-------~~~v~~Ll~~g~~~~ 248 (256)
T 2etb_A 233 K-------IEIFRHILQREFSGA 248 (256)
T ss_dssp C-------HHHHHHHHHHHHHHH
T ss_pred C-------HHHHHHHHhCCCCCC
Confidence 5 799999999987654
No 51
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.97 E-value=1.6e-31 Score=273.46 Aligned_cols=134 Identities=14% Similarity=0.107 Sum_probs=99.5
Q ss_pred CCchHHHHHHHcCCHH----HHHHHHhcCCCccCC----CCCCCChHHHHHHHc---CCHHHHHHHHHcCCCCCCCC---
Q 004286 83 RGSTPLHIAAGLGNVS----MCKCIATADPRLIGE----RNHENETPFFLAARH---GHKDAFLCLHYLCASVDDGY--- 148 (763)
Q Consensus 83 ~g~TpLh~Aa~~g~~~----~v~~Ll~~~~~~~~~----~~~~g~TpLh~A~~~---g~~~~v~~Ll~~ga~~~~~~--- 148 (763)
.|+||||+|+..|+.+ ++++|++.+++ ++. +|..|+||||+|+.. |+.+++++|+++|++++...
T Consensus 1 ~G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~-i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~ 79 (256)
T 2etb_A 1 FDRDRLFSVVSRGVPEELTGLLEYLRWNSKY-LTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLV 79 (256)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHHHTCC-TTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGG
T ss_pred CCccHHHHHHHcCCHHHHHHHHHHHHHcCCC-cccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhc
Confidence 3667777777777775 45556666776 666 677777777777777 77777777777777665211
Q ss_pred ---ccccCCCCChHHHHHHHcCChHHHHHHHHHhccccccccccC-------------CCcHHHHHhcCCCCccCCchHH
Q 004286 149 ---NYSRRKNGETILHYAISGYYFVDLAFQIIHLYEKLVNFVNER-------------GVSPLHLLATKPNAFRSGSHLG 212 (763)
Q Consensus 149 ---~~~~d~~G~TpLh~A~~~g~~~~iv~~LL~~~~~~~~~~d~~-------------G~TpLh~A~~~~~~~~~~~~~~ 212 (763)
...+|..|.||||+|+..|+. +++++|++. |++++..|.. |.||||+|+..++ .+
T Consensus 80 ~~~~~~~d~~g~t~L~~A~~~g~~-~~v~~Ll~~-ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~-------~~ 150 (256)
T 2etb_A 80 NAQCTDEFYQGHSALHIAIEKRSL-QCVKLLVEN-GADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQ-------WD 150 (256)
T ss_dssp GCCCCSTTTTTCCHHHHHHHTTCH-HHHHHHHHT-TCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTC-------HH
T ss_pred ccccccccccCCCHHHHHHHcCCH-HHHHHHHHc-CCCCCcccccccccccccccccCCCCHHHHHHHcCC-------HH
Confidence 112346788888888888888 888888884 8888888776 9999999999985 68
Q ss_pred HHHHHHH---cCCCCCc
Q 004286 213 LCTGIIY---HCISVDK 226 (763)
Q Consensus 213 iv~~Ll~---~ga~~~~ 226 (763)
++++|++ +|++++.
T Consensus 151 ~v~~Ll~~~~~ga~~n~ 167 (256)
T 2etb_A 151 VVTYLLENPHQPASLEA 167 (256)
T ss_dssp HHHHHHHCSSCCCCTTC
T ss_pred HHHHHHhccccCCCcCc
Confidence 9999988 7777763
No 52
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.97 E-value=2.2e-31 Score=275.22 Aligned_cols=204 Identities=19% Similarity=0.244 Sum_probs=174.4
Q ss_pred hhHHHHHHHHcCCHHHHHHHHcc--CCCcccc----ccCCCCChHHHHHHHc---CCHHHHHHHHHHhhhhcc-----cc
Q 004286 10 LKKGLFKSAMKGKWNEVVENYGK--DDRIHEA----RITRSGGTALHIAVSD---GQEEIVEDLVRIIHEKQQ-----LK 75 (763)
Q Consensus 10 ~~~~L~~aa~~g~~~~v~~lL~~--~~~~~~~----~~d~~g~TpLh~A~~~---g~~~~v~~Ll~~g~~~~~-----~~ 75 (763)
..++||.||..|+.+.|+.++.. ..+.+++ ..|..|+||||+||.. |+.++|++|+++|++.+. ..
T Consensus 13 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~ 92 (273)
T 2pnn_A 13 DRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNA 92 (273)
T ss_dssp CHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTC
T ss_pred cchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhc
Confidence 47899999999999999888863 1144444 3588999999999987 999999999999975321 12
Q ss_pred ccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCccCCCCC--------------CCChHHHHHHHcCCHHHHHHHHH--
Q 004286 76 VLKIGDERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNH--------------ENETPFFLAARHGHKDAFLCLHY-- 139 (763)
Q Consensus 76 ~~~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~--------------~g~TpLh~A~~~g~~~~v~~Ll~-- 139 (763)
....+|..|+||||+|+..|+.+++++|+++|++ ++.++. .|.||||+|+..|+.+++++|++
T Consensus 93 ~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~ 171 (273)
T 2pnn_A 93 SYTDSYYKGQTALHIAIERRNMTLVTLLVENGAD-VQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNS 171 (273)
T ss_dssp CCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCS
T ss_pred ccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCC-cCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 2333678999999999999999999999999998 888887 79999999999999999999999
Q ss_pred -cCCCCCCCCccccCCCCChHHHHHHHcCC---------hHHHHHHHHHhcccccc-------ccccCCCcHHHHHhcCC
Q 004286 140 -LCASVDDGYNYSRRKNGETILHYAISGYY---------FVDLAFQIIHLYEKLVN-------FVNERGVSPLHLLATKP 202 (763)
Q Consensus 140 -~ga~~~~~~~~~~d~~G~TpLh~A~~~g~---------~~~iv~~LL~~~~~~~~-------~~d~~G~TpLh~A~~~~ 202 (763)
+|++++ .+|.+|+||||+|+..|+ . +++++|++. |++++ .+|..|.||||+|+..|
T Consensus 172 ~~gad~~-----~~d~~g~tpLh~A~~~~~~~~~~~~~~~-~~v~~Ll~~-ga~~n~~~~~~~~~d~~g~TpL~~A~~~g 244 (273)
T 2pnn_A 172 WQPADIS-----ARDSVGNTVLHALVEVADNTVDNTKFVT-SMYNEILIL-GAKLHPTLKLEEITNRKGLTPLALAASSG 244 (273)
T ss_dssp SCCCCTT-----CCCTTSCCHHHHHHHHCCSCHHHHHHHH-HHHHHHHHH-HHHHCTTCCGGGCCCTTSCCHHHHHHHTT
T ss_pred cCCCCce-----eeCCCCCcHHHHHHHccCcchhHHHHHH-HHHHHHHHh-hhhcccccccccccCCCCCCHHHHHHHhC
Confidence 999998 899999999999999998 7 999999995 88987 48999999999999999
Q ss_pred CCccCCchHHHHHHHHHcCC-CCCccc
Q 004286 203 NAFRSGSHLGLCTGIIYHCI-SVDKLQ 228 (763)
Q Consensus 203 ~~~~~~~~~~iv~~Ll~~ga-~~~~~~ 228 (763)
+ .+++++|+++|+ |+....
T Consensus 245 ~-------~~iv~~Ll~~ga~dp~~~~ 264 (273)
T 2pnn_A 245 K-------IGVLAYILQREIHEPECRH 264 (273)
T ss_dssp C-------HHHHHHHHHHHTC------
T ss_pred h-------HHHHHHHHHCCCCCchhhh
Confidence 5 799999999999 665443
No 53
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.97 E-value=2.3e-31 Score=272.83 Aligned_cols=199 Identities=20% Similarity=0.201 Sum_probs=176.0
Q ss_pred hHHHHHHHHcCCHHHHHHHHc----cCCCccccccC----CCCChHHHHHH---HcCCHHHHHHHHHHhhhhcc-----c
Q 004286 11 KKGLFKSAMKGKWNEVVENYG----KDDRIHEARIT----RSGGTALHIAV---SDGQEEIVEDLVRIIHEKQQ-----L 74 (763)
Q Consensus 11 ~~~L~~aa~~g~~~~v~~lL~----~~~~~~~~~~d----~~g~TpLh~A~---~~g~~~~v~~Ll~~g~~~~~-----~ 74 (763)
+++||.|+..|+.+.++.++. . +.+++..+ ..|+||||+|+ ..|+.+++++|++.|++.+. .
T Consensus 6 ~~~L~~A~~~g~~~~v~~ll~~l~~~--~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~ 83 (260)
T 3jxi_A 6 RPILFDIVSRGSPDGLEGLLSFLLTH--KKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFIN 83 (260)
T ss_dssp HHHHHHHHHHTCGGGGTTHHHHHHHH--TCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHT
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHhc--CCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhc
Confidence 689999999999998777666 4 56666544 77999999999 77999999999999976432 1
Q ss_pred cccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCccCCCC--------------CCCChHHHHHHHcCCHHHHHHHHH-
Q 004286 75 KVLKIGDERGSTPLHIAAGLGNVSMCKCIATADPRLIGERN--------------HENETPFFLAARHGHKDAFLCLHY- 139 (763)
Q Consensus 75 ~~~~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~--------------~~g~TpLh~A~~~g~~~~v~~Ll~- 139 (763)
.+++..|..|+||||+|+..|+.++|++|+++|++ ++.++ ..|.||||+|+..|+.+++++|++
T Consensus 84 ~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~ 162 (260)
T 3jxi_A 84 SPFRDVYYRGQTALHIAIERRCKHYVELLVEKGAD-VHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTEN 162 (260)
T ss_dssp CCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHC
T ss_pred ccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCC-cCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhc
Confidence 34566677999999999999999999999999998 89888 689999999999999999999999
Q ss_pred --cCCCCCCCCccccCCCCChHHHHHHHcCC---------hHHHHHHHHHhccccc-------cccccCCCcHHHHHhcC
Q 004286 140 --LCASVDDGYNYSRRKNGETILHYAISGYY---------FVDLAFQIIHLYEKLV-------NFVNERGVSPLHLLATK 201 (763)
Q Consensus 140 --~ga~~~~~~~~~~d~~G~TpLh~A~~~g~---------~~~iv~~LL~~~~~~~-------~~~d~~G~TpLh~A~~~ 201 (763)
+|++++ .+|..|+||||+|+..++ . +++++|++. |+++ +.+|.+|.||||+|+..
T Consensus 163 ~~~ga~~~-----~~d~~g~TpLh~A~~~~~~~~~~~~~~~-~~v~~Ll~~-ga~~~~~~~~~~~~d~~g~tpL~~A~~~ 235 (260)
T 3jxi_A 163 GHKQADLR-----RQDSRGNTVLHALVAIADNTRENTKFVT-KMYDLLLIK-CAKLFPDTNLEALLNNDGLSPLMMAAKT 235 (260)
T ss_dssp SSCCCCTT-----CCCTTSCCHHHHHHHHCCSSHHHHHHHH-HHHHHHHHH-HHHHCTTCCGGGCCCTTSCCHHHHHHHT
T ss_pred cccCCCCc-----ccCCCCCcHHHHHHHhccCchhHHHHHH-HHHHHHHHh-CcccccccchhhcccCCCCCHHHHHHHc
Confidence 999998 899999999999999888 7 999999995 8888 77999999999999999
Q ss_pred CCCccCCchHHHHHHHHHcCCCCCc
Q 004286 202 PNAFRSGSHLGLCTGIIYHCISVDK 226 (763)
Q Consensus 202 ~~~~~~~~~~~iv~~Ll~~ga~~~~ 226 (763)
|+ .+++++|+++|.+...
T Consensus 236 g~-------~~~v~~Ll~~g~~~~~ 253 (260)
T 3jxi_A 236 GK-------IGIFQHIIRREIADAA 253 (260)
T ss_dssp TC-------HHHHHHHHHHHHHHHC
T ss_pred CC-------HHHHHHHHHhCCCccc
Confidence 95 7999999999976653
No 54
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.97 E-value=8.6e-30 Score=248.36 Aligned_cols=164 Identities=16% Similarity=0.119 Sum_probs=156.2
Q ss_pred cccccCCCCChHHHHHHHcCCHHHHHHHHHHhhhhccccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCccCCCCC
Q 004286 37 HEARITRSGGTALHIAVSDGQEEIVEDLVRIIHEKQQLKVLKIGDERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNH 116 (763)
Q Consensus 37 ~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~ 116 (763)
.++.+|..|+||||+||..|+.+++++|++.| ++++.+|..|+||||+|+..|+.+++++|+++|++ ++.+|.
T Consensus 27 ~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~------~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~ 99 (192)
T 2rfm_A 27 LRNYRDSYNRTPLMVACMLGMENAIDKLVENF------DKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSN-VNTKDF 99 (192)
T ss_dssp HHTCCCTTCCCHHHHHHHHTCGGGHHHHHHHH------CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC-TTCCCT
T ss_pred HHhCcCCCCCCHHHHHHHcCCHHHHHHHHHhc------cccccccccCccHHHHHHHcCCHHHHHHHHHCCCC-CCCCCC
Confidence 45678999999999999999999999999998 67889999999999999999999999999999998 999999
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCccccCCCCChHHHHHHHcCChHHHHHHHHHhccccccccccCCCcHHH
Q 004286 117 ENETPFFLAARHGHKDAFLCLHYLCASVDDGYNYSRRKNGETILHYAISGYYFVDLAFQIIHLYEKLVNFVNERGVSPLH 196 (763)
Q Consensus 117 ~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~d~~G~TpLh~A~~~g~~~~iv~~LL~~~~~~~~~~d~~G~TpLh 196 (763)
.|.||||+|+..|+.+++++|+++|++++ .+|..|.||||+|+..|+. +++++|++ .|++++.+|..|.||||
T Consensus 100 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-----~~~~~g~t~L~~A~~~~~~-~~v~~Ll~-~ga~~~~~~~~g~t~l~ 172 (192)
T 2rfm_A 100 SGKTPLMWSIIFGYSEMSYFLLEHGANVN-----DRNLEGETPLIVASKYGRS-EIVKKLLE-LGADISARDLTGLTAEA 172 (192)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHHTTCCSS-----CCCTTCCCHHHHHHHHTCH-HHHHHHHH-TTCCTTCBCTTSCBHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHCCCCCC-----CCCCCCCCHHHHHHHcCCH-HHHHHHHH-CCCCCCCcCCCCCCHHH
Confidence 99999999999999999999999999998 8999999999999999999 99999999 49999999999999999
Q ss_pred HHhcCCCCccCCchHHHHHHHHHcC
Q 004286 197 LLATKPNAFRSGSHLGLCTGIIYHC 221 (763)
Q Consensus 197 ~A~~~~~~~~~~~~~~iv~~Ll~~g 221 (763)
+|+..++ .+++++|+++|
T Consensus 173 ~A~~~~~-------~~~v~~Ll~~~ 190 (192)
T 2rfm_A 173 SARIFGR-------QEVIKIFTEVR 190 (192)
T ss_dssp HHHHTTC-------HHHHHHHHHHH
T ss_pred HHHHhCc-------HHHHHHHHhcc
Confidence 9999985 79999999865
No 55
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.97 E-value=1.6e-30 Score=266.60 Aligned_cols=136 Identities=15% Similarity=0.070 Sum_probs=103.3
Q ss_pred CCCCchHHHHHHHcCCHHHHHHH----HhcCCCccCCCC----CCCChHHHHHH---HcCCHHHHHHHHHcCCCCCC---
Q 004286 81 DERGSTPLHIAAGLGNVSMCKCI----ATADPRLIGERN----HENETPFFLAA---RHGHKDAFLCLHYLCASVDD--- 146 (763)
Q Consensus 81 d~~g~TpLh~Aa~~g~~~~v~~L----l~~~~~~~~~~~----~~g~TpLh~A~---~~g~~~~v~~Ll~~ga~~~~--- 146 (763)
+..|+||||.|++.|+.+.++.| ++.+++ ++..+ ..|+||||+|+ ..|+.+++++|++.|++.+.
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~-~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~ 80 (260)
T 3jxi_A 2 KVFNRPILFDIVSRGSPDGLEGLLSFLLTHKKR-LTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMRE 80 (260)
T ss_dssp CCCCHHHHHHHHHHTCGGGGTTHHHHHHHHTCC-TTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHH
T ss_pred ccchHHHHHHHHHhCCHHHHHHHHHHHHhcCCC-cchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHh
Confidence 45677888888888887744444 447776 56554 56888888888 56888888888887765321
Q ss_pred ---CCccccCCCCChHHHHHHHcCChHHHHHHHHHhccccccccc--------------cCCCcHHHHHhcCCCCccCCc
Q 004286 147 ---GYNYSRRKNGETILHYAISGYYFVDLAFQIIHLYEKLVNFVN--------------ERGVSPLHLLATKPNAFRSGS 209 (763)
Q Consensus 147 ---~~~~~~d~~G~TpLh~A~~~g~~~~iv~~LL~~~~~~~~~~d--------------~~G~TpLh~A~~~~~~~~~~~ 209 (763)
...+..|..|+||||+|+..|+. +++++|++ .|++++..+ ..|.||||+|+..|+
T Consensus 81 ~~~~~~~~~d~~g~t~L~~A~~~g~~-~~v~~Ll~-~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~------ 152 (260)
T 3jxi_A 81 FINSPFRDVYYRGQTALHIAIERRCK-HYVELLVE-KGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQ------ 152 (260)
T ss_dssp HHTCCBCCSSEESBCHHHHHHHTTCH-HHHHHHHH-TTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTC------
T ss_pred hhcccccccccCCCCHHHHHHHcCCH-HHHHHHHh-CCCCcCccccccccCcccccccccCCCCHHHHHHHcCC------
Confidence 22235566899999999999999 99999998 488999888 689999999999985
Q ss_pred hHHHHHHHHH---cCCCCCc
Q 004286 210 HLGLCTGIIY---HCISVDK 226 (763)
Q Consensus 210 ~~~iv~~Ll~---~ga~~~~ 226 (763)
.+++++|++ +|++++.
T Consensus 153 -~~~v~~Ll~~~~~ga~~~~ 171 (260)
T 3jxi_A 153 -PHIVHYLTENGHKQADLRR 171 (260)
T ss_dssp -HHHHHHHHHCSSCCCCTTC
T ss_pred -HHHHHHHHhccccCCCCcc
Confidence 689999988 7777663
No 56
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.97 E-value=1.3e-30 Score=269.53 Aligned_cols=192 Identities=15% Similarity=0.134 Sum_probs=175.8
Q ss_pred hHHHHHHHHcCCHHHHHHHHccCCCccccccCCCCChHHHHHHHcCCHHHHHHHHHHhhhhccccccccCCCCCchHHHH
Q 004286 11 KKGLFKSAMKGKWNEVVENYGKDDRIHEARITRSGGTALHIAVSDGQEEIVEDLVRIIHEKQQLKVLKIGDERGSTPLHI 90 (763)
Q Consensus 11 ~~~L~~aa~~g~~~~v~~lL~~~~~~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~d~~g~TpLh~ 90 (763)
.+++|.|+..|+.+.++.++.......++..|.+|+||||+||..|+.+++++|++.|+ .+++.+|..|.||||+
T Consensus 77 ~~~l~~a~~~~~~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~-----~~~~~~~~~g~tpL~~ 151 (276)
T 4hbd_A 77 RSDAHPELVRRHLVTFRAMSARLLDYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGV-----CKVDKQNRAGYSPIML 151 (276)
T ss_dssp STTCCHHHHHHHHHHHHHHCHHHHHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSC-----CCTTCCCTTSCCHHHH
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCC-----CcCCCCCCCCCCHHHH
Confidence 34567888889999888888773334488899999999999999999999999999983 3789999999999999
Q ss_pred HH-----HcCCHHHHHHHHhcCCCccCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCccccCCCCChHHHHHHH
Q 004286 91 AA-----GLGNVSMCKCIATADPRLIGERNHENETPFFLAARHGHKDAFLCLHYLCASVDDGYNYSRRKNGETILHYAIS 165 (763)
Q Consensus 91 Aa-----~~g~~~~v~~Ll~~~~~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~d~~G~TpLh~A~~ 165 (763)
|+ ..++.++++.|++.|.. .+..+..|+||||+|+..|+.+++++|+++|++++ .+|.+|+||||+|+.
T Consensus 152 a~~~~~~~~~~~~~v~~Ll~~g~~-~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n-----~~d~~G~TpLh~A~~ 225 (276)
T 4hbd_A 152 TALATLKTQDDIETVLQLFRLGNI-NAKASQAGQTALMLAVSHGRVDVVKALLACEADVN-----VQDDDGSTALMCACE 225 (276)
T ss_dssp GGGCCCCSHHHHHHHHHHHHHSCT-TCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-----CCCTTSCCHHHHHHH
T ss_pred HHHHHhhhhhhHHHHHHHHHcCCC-ccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCC-----CCCCCCCCHHHHHHH
Confidence 99 67899999999999987 88899999999999999999999999999999999 899999999999999
Q ss_pred cCChHHHHHHHHHhccccccccccCCCcHHHHHhcCCCCccCCchHHHHHHHHHcC
Q 004286 166 GYYFVDLAFQIIHLYEKLVNFVNERGVSPLHLLATKPNAFRSGSHLGLCTGIIYHC 221 (763)
Q Consensus 166 ~g~~~~iv~~LL~~~~~~~~~~d~~G~TpLh~A~~~~~~~~~~~~~~iv~~Ll~~g 221 (763)
.|+. +++++|++..|++++.+|.+|.||||+|+..|+ .+++++|++++
T Consensus 226 ~g~~-~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~~g~-------~~iv~~Ll~~~ 273 (276)
T 4hbd_A 226 HGHK-EIAGLLLAVPSCDISLTDRDGSTALMVALDAGQ-------SEIASMLYSRM 273 (276)
T ss_dssp HTCH-HHHHHHHTSTTCCTTCCCTTSCCHHHHHHHHTC-------HHHHHHHHHHC
T ss_pred CCCH-HHHHHHHhcCCCCCcCcCCCCCCHHHHHHHcCC-------HHHHHHHHhcc
Confidence 9999 999999996699999999999999999999985 69999999865
No 57
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.96 E-value=4.7e-29 Score=238.41 Aligned_cols=169 Identities=19% Similarity=0.133 Sum_probs=152.8
Q ss_pred hHHHHHHHHcCCHHHHHHHHccCCCccccccCCCCChHHHHHHHcCCHHHHHHHHHHhhhhccccccccCCCCCchHHHH
Q 004286 11 KKGLFKSAMKGKWNEVVENYGKDDRIHEARITRSGGTALHIAVSDGQEEIVEDLVRIIHEKQQLKVLKIGDERGSTPLHI 90 (763)
Q Consensus 11 ~~~L~~aa~~g~~~~v~~lL~~~~~~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~d~~g~TpLh~ 90 (763)
.++||.||..|+.+.++.++... ...++..|..|+||||+|+..|+.+++++|+++| ++++.+|..|+||||+
T Consensus 3 ~~~L~~A~~~g~~~~v~~ll~~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g------~~~~~~~~~g~t~L~~ 75 (172)
T 3v30_A 3 SLSIHQLAAQGELDQLKEHLRKG-DNLVNKPDERGFTPLIWASAFGEIETVRFLLEWG------ADPHILAKERESALSL 75 (172)
T ss_dssp -CCHHHHHHTTCHHHHHHHHTTC-SGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHT------CCTTCCCTTCCCHHHH
T ss_pred hhhHHHHHHcCCHHHHHHHHHcC-cccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcC------CCchhhcccCCCHHHH
Confidence 46899999999999999999883 3447888999999999999999999999999998 6789999999999999
Q ss_pred HHHcCCHHHHHHHHhcCCCccCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCccccCCCCChHHHHHHHcCChH
Q 004286 91 AAGLGNVSMCKCIATADPRLIGERNHENETPFFLAARHGHKDAFLCLHYLCASVDDGYNYSRRKNGETILHYAISGYYFV 170 (763)
Q Consensus 91 Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~d~~G~TpLh~A~~~g~~~ 170 (763)
|+..|+.+++++|+++|++ ++.+|..|+||||+|+..|+.+++++|+++|++++ .+|..|.||||+|+..|+.
T Consensus 76 A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-----~~~~~g~t~l~~A~~~~~~- 148 (172)
T 3v30_A 76 ASTGGYTDIVGLLLERDVD-INIYDWNGGTPLLYAVRGNHVKCVEALLARGADLT-----TEADSGYTPMDLAVALGYR- 148 (172)
T ss_dssp HHHTTCHHHHHHHHTTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-----CCCTTSCCHHHHHHHHTCH-
T ss_pred HHHCCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc-----ccCCCCCCHHHHHHHhCcH-
Confidence 9999999999999999998 99999999999999999999999999999999998 8999999999999999999
Q ss_pred HHHHHHHHhccccccccccCCCcH
Q 004286 171 DLAFQIIHLYEKLVNFVNERGVSP 194 (763)
Q Consensus 171 ~iv~~LL~~~~~~~~~~d~~G~Tp 194 (763)
+++++|+++ ++++...+..|.||
T Consensus 149 ~~~~~L~~~-~~~~~~~~~~~~~p 171 (172)
T 3v30_A 149 KVQQVIENH-ILKLFQSNLVPADP 171 (172)
T ss_dssp HHHHHHHHH-HHHHSCC-------
T ss_pred HHHHHHHHH-HHHHhcccCCCCCC
Confidence 999999994 88999999999887
No 58
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.96 E-value=3.5e-29 Score=238.08 Aligned_cols=161 Identities=19% Similarity=0.192 Sum_probs=150.3
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHHhhhhccccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCccCCCCCCCChHHH
Q 004286 44 SGGTALHIAVSDGQEEIVEDLVRIIHEKQQLKVLKIGDERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETPFF 123 (763)
Q Consensus 44 ~g~TpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~TpLh 123 (763)
.|.||||+|+..|+.+++++|++.| .+++.+|..|+||||+|+..|+.+++++|+++|++ ++.+|..|.||||
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~------~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~ 74 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQE------NVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGAD-PQLLGKGRESALS 74 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHS------SCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHH
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcC------CCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCC-CCCcCCCCCcHHH
Confidence 5889999999999999999999987 66889999999999999999999999999999998 8999999999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCCCCccccCCCCChHHHHHHHcCChHHHHHHHHHhccccccccccCCCcHHHHHhcCCC
Q 004286 124 LAARHGHKDAFLCLHYLCASVDDGYNYSRRKNGETILHYAISGYYFVDLAFQIIHLYEKLVNFVNERGVSPLHLLATKPN 203 (763)
Q Consensus 124 ~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~d~~G~TpLh~A~~~g~~~~iv~~LL~~~~~~~~~~d~~G~TpLh~A~~~~~ 203 (763)
+|+..|+.+++++|+++|++++ .+|..|.||||+|+..|+. +++++|++ .|++++.+|..|.||||+|+..++
T Consensus 75 ~A~~~~~~~~v~~Ll~~g~~~~-----~~~~~g~t~L~~A~~~~~~-~~v~~Ll~-~g~~~~~~~~~g~t~l~~A~~~~~ 147 (167)
T 3v31_A 75 LACSKGYTDIVKMLLDCGVDVN-----EYDWNGGTPLLYAVHGNHV-KCVKMLLE-SGADPTIETDSGYNSMDLAVALGY 147 (167)
T ss_dssp HHHHHTCHHHHHHHHHHTCCTT-----CCCTTSCCHHHHHHHTTCH-HHHHHHHH-TTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred HHHHcCCHHHHHHHHHCCCCCC-----cCCCCCCCHHHHHHHcCCH-HHHHHHHH-cCCCCCCcCCCCCCHHHHHHHcCc
Confidence 9999999999999999999998 8999999999999999999 99999999 599999999999999999999985
Q ss_pred CccCCchHHHHHHHHHcCCCCC
Q 004286 204 AFRSGSHLGLCTGIIYHCISVD 225 (763)
Q Consensus 204 ~~~~~~~~~iv~~Ll~~ga~~~ 225 (763)
.+++++|++++++..
T Consensus 148 -------~~~~~~L~~~~~~~~ 162 (167)
T 3v31_A 148 -------RSVQQVIESHLLKLL 162 (167)
T ss_dssp -------HHHHHHHHHHHHHHC
T ss_pred -------HHHHHHHHHHHHHHH
Confidence 699999999876554
No 59
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.96 E-value=2e-29 Score=260.51 Aligned_cols=166 Identities=16% Similarity=0.203 Sum_probs=151.4
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHHHhhhhccccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCccCCCCCCCChHH
Q 004286 43 RSGGTALHIAVSDGQEEIVEDLVRIIHEKQQLKVLKIGDERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETPF 122 (763)
Q Consensus 43 ~~g~TpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~TpL 122 (763)
..+++++|.|+..|+.+.++.+++.+.+ ..+|.+|.+|+||||+|+..|+.+++++|++.|+..++.+|..|.|||
T Consensus 74 ~~~~~~l~~a~~~~~~~~~~~l~~~~~~----~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL 149 (276)
T 4hbd_A 74 LACRSDAHPELVRRHLVTFRAMSARLLD----YVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPI 149 (276)
T ss_dssp HHHSTTCCHHHHHHHHHHHHHHCHHHHH----HHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHH
T ss_pred HHhccCCCHHHHHHHHHHHHHHHHHHHh----hcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHH
Confidence 3467889999999999999999998854 458999999999999999999999999999999955999999999999
Q ss_pred HHHH-----HcCCHHHHHHHHHcCCCCCCCCccccCCCCChHHHHHHHcCChHHHHHHHHHhccccccccccCCCcHHHH
Q 004286 123 FLAA-----RHGHKDAFLCLHYLCASVDDGYNYSRRKNGETILHYAISGYYFVDLAFQIIHLYEKLVNFVNERGVSPLHL 197 (763)
Q Consensus 123 h~A~-----~~g~~~~v~~Ll~~ga~~~~~~~~~~d~~G~TpLh~A~~~g~~~~iv~~LL~~~~~~~~~~d~~G~TpLh~ 197 (763)
|+|+ ..++.+++++|++.|++.+ ..|..|+||||+|+..|+. +++++|++ .|++++.+|.+|.||||+
T Consensus 150 ~~a~~~~~~~~~~~~~v~~Ll~~g~~~~-----~~~~~g~tpLh~A~~~g~~-~~v~~Ll~-~gad~n~~d~~G~TpLh~ 222 (276)
T 4hbd_A 150 MLTALATLKTQDDIETVLQLFRLGNINA-----KASQAGQTALMLAVSHGRV-DVVKALLA-CEADVNVQDDDGSTALMC 222 (276)
T ss_dssp HHGGGCCCCSHHHHHHHHHHHHHSCTTC-----CCTTTCCCHHHHHHHTTCH-HHHHHHHH-TTCCTTCCCTTSCCHHHH
T ss_pred HHHHHHHhhhhhhHHHHHHHHHcCCCcc-----ccCCCCCCHHHHHHHcCCH-HHHHHHHh-CCCCCCCCCCCCCCHHHH
Confidence 9999 6789999999999999888 7899999999999999999 99999999 599999999999999999
Q ss_pred HhcCCCCccCCchHHHHHHHHH-cCCCCCc
Q 004286 198 LATKPNAFRSGSHLGLCTGIIY-HCISVDK 226 (763)
Q Consensus 198 A~~~~~~~~~~~~~~iv~~Ll~-~ga~~~~ 226 (763)
|+..|+ .+++++|++ .|++++.
T Consensus 223 A~~~g~-------~~iv~~Ll~~~gad~~~ 245 (276)
T 4hbd_A 223 ACEHGH-------KEIAGLLLAVPSCDISL 245 (276)
T ss_dssp HHHHTC-------HHHHHHHHTSTTCCTTC
T ss_pred HHHCCC-------HHHHHHHHhcCCCCCcC
Confidence 999985 688888887 7776653
No 60
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.96 E-value=3.4e-29 Score=236.78 Aligned_cols=158 Identities=17% Similarity=0.143 Sum_probs=126.1
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHHhhhhccccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCccCCCCCCCChHHH
Q 004286 44 SGGTALHIAVSDGQEEIVEDLVRIIHEKQQLKVLKIGDERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETPFF 123 (763)
Q Consensus 44 ~g~TpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~TpLh 123 (763)
...||||.|+..|+.+++++|+++| .+++.+|..|+||||+|+. |+.+++++|+++|++ ++.+|..|.||||
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~Ll~~~------~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~ 75 (162)
T 1ihb_A 4 PWGNELASAAARGDLEQLTSLLQNN------VNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGAN-PDLKDRTGFAVIH 75 (162)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHTTSC------CCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCC-TTCCCTTSCCHHH
T ss_pred hHhhHHHHHHHcCCHHHHHHHHhCC------CCccccCccCccHHHHHHc-CcHHHHHHHHHcCCC-CCCCCCCCCCHHH
Confidence 4568888888888888888888776 5677778888888888887 888888888888877 7888888888888
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCCCCccccCCCCChHHHHHHHcCChHHHHHHHHHhcccc-ccccccCCCcHHHHHhcCC
Q 004286 124 LAARHGHKDAFLCLHYLCASVDDGYNYSRRKNGETILHYAISGYYFVDLAFQIIHLYEKL-VNFVNERGVSPLHLLATKP 202 (763)
Q Consensus 124 ~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~d~~G~TpLh~A~~~g~~~~iv~~LL~~~~~~-~~~~d~~G~TpLh~A~~~~ 202 (763)
+|+..|+.+++++|+++|++++ .+|.+|.||||+|+..|+. +++++|++. |++ ++..|..|.||||+|+..+
T Consensus 76 ~A~~~~~~~~v~~Ll~~g~~~~-----~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~-g~~~~~~~~~~g~t~l~~A~~~~ 148 (162)
T 1ihb_A 76 DAARAGFLDTLQTLLEFQADVN-----IEDNEGNLPLHLAAKEGHL-RVVEFLVKH-TASNVGHRNHKGDTACDLARLYG 148 (162)
T ss_dssp HHHHHTCHHHHHHHHHTTCCTT-----CCCTTSCCHHHHHHHTTCH-HHHHHHHHH-SCCCTTCCCTTSCCHHHHHHHTT
T ss_pred HHHHcCCHHHHHHHHHcCCCCC-----CcCCCCCCHHHHHHHcCCH-HHHHHHHHc-cCCCCCCcCCCCCcHHHHHHHcC
Confidence 8888888888888888888877 7788888888888888888 888888885 555 5788888888888888887
Q ss_pred CCccCCchHHHHHHHHHcCCC
Q 004286 203 NAFRSGSHLGLCTGIIYHCIS 223 (763)
Q Consensus 203 ~~~~~~~~~~iv~~Ll~~ga~ 223 (763)
+ .+++++|+++|||
T Consensus 149 ~-------~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 149 R-------NEVVSLMQANGAG 162 (162)
T ss_dssp C-------HHHHHHHHHTC--
T ss_pred C-------HHHHHHHHHhCCC
Confidence 4 6888888888875
No 61
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.96 E-value=1.3e-28 Score=234.61 Aligned_cols=160 Identities=23% Similarity=0.213 Sum_probs=145.5
Q ss_pred cCCCCChHHHHHHHcCCHHHHHHHHHHhhhhccccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCccCCCCCCCCh
Q 004286 41 ITRSGGTALHIAVSDGQEEIVEDLVRIIHEKQQLKVLKIGDERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENET 120 (763)
Q Consensus 41 ~d~~g~TpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~T 120 (763)
....+.||||.||..|+.+++++|+++| ++++.+|..|+||||+|+..|+.+++++|+++|++ ++.+|..|.|
T Consensus 10 ~~~~~~~~l~~A~~~g~~~~v~~Ll~~g------~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t 82 (169)
T 2y1l_E 10 HGSDLGKKLLEAARAGRDDEVRILMANG------ADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGAD-VNAVDHAGMT 82 (169)
T ss_dssp ---CHHHHHHHHHHHTCHHHHHHHHHTT------CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCC
T ss_pred CCCcccchHHHHHHcCCHHHHHHHHHCC------CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCccCCCCCC
Confidence 3566789999999999999999999988 67888999999999999999999999999999988 8999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCCCccccCCCCChHHHHHHHcCChHHHHHHHHHhccccccccccCCCcHHHHHhc
Q 004286 121 PFFLAARHGHKDAFLCLHYLCASVDDGYNYSRRKNGETILHYAISGYYFVDLAFQIIHLYEKLVNFVNERGVSPLHLLAT 200 (763)
Q Consensus 121 pLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~d~~G~TpLh~A~~~g~~~~iv~~LL~~~~~~~~~~d~~G~TpLh~A~~ 200 (763)
|||+|+..|+.+++++|+++|++++ .+|..|.||||+|+..|+. +++++|++ .|++++.+|..|.||||+|+.
T Consensus 83 ~L~~A~~~~~~~~~~~Ll~~g~~~~-----~~~~~g~t~L~~A~~~~~~-~~v~~Ll~-~g~~~~~~~~~g~t~l~~A~~ 155 (169)
T 2y1l_E 83 PLRLAALFGHLEIVEVLLKNGADVN-----ANDMEGHTPLHLAAMFGHL-EIVEVLLK-NGADVNAQDKFGKTAFDISID 155 (169)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTT-----CCCTTSCCHHHHHHHTTCH-HHHHHHHH-TTCCTTCCCTTSCCHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCC-----CCCCCCCCHHHHHHHcCCH-HHHHHHHH-cCCCCCCcCCCCCCHHHHHHH
Confidence 9999999999999999999999988 8899999999999999999 99999999 489999999999999999999
Q ss_pred CCCCccCCchHHHHHHHHHcC
Q 004286 201 KPNAFRSGSHLGLCTGIIYHC 221 (763)
Q Consensus 201 ~~~~~~~~~~~~iv~~Ll~~g 221 (763)
.++ .+++++|++.|
T Consensus 156 ~~~-------~~~~~~L~~~G 169 (169)
T 2y1l_E 156 NGN-------EDLAEILQKLN 169 (169)
T ss_dssp TTC-------HHHHHHHHTC-
T ss_pred hCC-------HHHHHHHHHcC
Confidence 985 69999999876
No 62
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.96 E-value=1.2e-30 Score=279.50 Aligned_cols=157 Identities=13% Similarity=0.113 Sum_probs=118.8
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHHHhhhhccccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCC----ccCCCCCCC
Q 004286 43 RSGGTALHIAVSDGQEEIVEDLVRIIHEKQQLKVLKIGDERGSTPLHIAAGLGNVSMCKCIATADPR----LIGERNHEN 118 (763)
Q Consensus 43 ~~g~TpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~----~~~~~~~~g 118 (763)
.+++||||+||..|+.++|++|+++|+.. ...+..|..|.||||+||..|+.++|++|+++|++ .++.++
T Consensus 90 ~~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~---~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~--- 163 (376)
T 2aja_A 90 IKSEVICFVAAITGCSSALDTLCLLLTSD---EIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN--- 163 (376)
T ss_dssp CCHHHHHHHHHHHCCHHHHHHHTTC--CC---SSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH---
T ss_pred CCcCCHHHHHHHcCCHHHHHHHHHcCCcH---HHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC---
Confidence 34568888888888888888888887421 11223455678888888888888888888888864 133333
Q ss_pred ChHHHHHHHcCCHHHHHHHHHcCCCCCCCCccc--cCCCCChHHHHHH-HcCChHHHHHHHHHhccccccccccCCCcHH
Q 004286 119 ETPFFLAARHGHKDAFLCLHYLCASVDDGYNYS--RRKNGETILHYAI-SGYYFVDLAFQIIHLYEKLVNFVNERGVSPL 195 (763)
Q Consensus 119 ~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~--~d~~G~TpLh~A~-~~g~~~~iv~~LL~~~~~~~~~~d~~G~TpL 195 (763)
.||||+||..|+.++|++|+++|++++ . .|..|.||||+|+ .+|+. +++++|++ .|+ .|.|||
T Consensus 164 ~TpLh~Aa~~G~~eiv~~Ll~~ga~~~-----~~~~d~~g~TpL~~Aa~~~G~~-eiv~~Ll~-~ga-------~~~taL 229 (376)
T 2aja_A 164 YHAFRLAAENGHLHVLNRLCELAPTEA-----TAMIQAENYYAFRWAAVGRGHH-NVINFLLD-CPV-------MLAYAE 229 (376)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHSCGGGH-----HHHHHHHHHHHHHHHHSTTCCH-HHHHHHTT-SHH-------HHHHHH
T ss_pred CCHHHHHHHCCCHHHHHHHHHcCCccc-----hhccCCCCCCHHHHHHHHCCCH-HHHHHHHh-CCC-------ccchHH
Confidence 888888888888888888888888766 5 7777888888888 88888 88888888 453 278888
Q ss_pred HHHhcCCCCccCCchHHHHHHHHHcCCCCCc
Q 004286 196 HLLATKPNAFRSGSHLGLCTGIIYHCISVDK 226 (763)
Q Consensus 196 h~A~~~~~~~~~~~~~~iv~~Ll~~ga~~~~ 226 (763)
|+|+.+|+ .+++++|+++|++++.
T Consensus 230 ~~Aa~~g~-------~evv~lL~~~ga~~~~ 253 (376)
T 2aja_A 230 IHEFEYGE-------KYVNPFIARHVNRLKE 253 (376)
T ss_dssp HCTTTTTT-------TTHHHHHHHHHHHHHH
T ss_pred HHHHHCCC-------HHHHHHHHhcCccccc
Confidence 88888885 5788888888876654
No 63
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.96 E-value=8e-29 Score=236.81 Aligned_cols=164 Identities=19% Similarity=0.203 Sum_probs=153.1
Q ss_pred CChHHHHHHHcCCHHHHHHHHHHhhhhccccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCccCCCCCCCChHHHH
Q 004286 45 GGTALHIAVSDGQEEIVEDLVRIIHEKQQLKVLKIGDERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETPFFL 124 (763)
Q Consensus 45 g~TpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~TpLh~ 124 (763)
+.||||.|+..|+.++++.|++.+. ..++.+|..|+||||+|+..|+.+++++|+++|++ ++.+|..|.||||+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~-----~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~ 75 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGD-----NLVNKPDERGFTPLIWASAFGEIETVRFLLEWGAD-PHILAKERESALSL 75 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCS-----GGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC-TTCCCTTCCCHHHH
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCc-----ccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-chhhcccCCCHHHH
Confidence 5789999999999999999999873 34888999999999999999999999999999998 99999999999999
Q ss_pred HHHcCCHHHHHHHHHcCCCCCCCCccccCCCCChHHHHHHHcCChHHHHHHHHHhccccccccccCCCcHHHHHhcCCCC
Q 004286 125 AARHGHKDAFLCLHYLCASVDDGYNYSRRKNGETILHYAISGYYFVDLAFQIIHLYEKLVNFVNERGVSPLHLLATKPNA 204 (763)
Q Consensus 125 A~~~g~~~~v~~Ll~~ga~~~~~~~~~~d~~G~TpLh~A~~~g~~~~iv~~LL~~~~~~~~~~d~~G~TpLh~A~~~~~~ 204 (763)
|+..|+.+++++|+++|++++ .+|..|.||||+|+..|+. +++++|++ .|++++.+|.+|.||||+|+..++
T Consensus 76 A~~~~~~~~v~~Ll~~g~~~~-----~~~~~g~t~L~~A~~~~~~-~~v~~Ll~-~ga~~~~~~~~g~t~l~~A~~~~~- 147 (172)
T 3v30_A 76 ASTGGYTDIVGLLLERDVDIN-----IYDWNGGTPLLYAVRGNHV-KCVEALLA-RGADLTTEADSGYTPMDLAVALGY- 147 (172)
T ss_dssp HHHTTCHHHHHHHHTTTCCTT-----CCCTTSCCHHHHHHHTTCH-HHHHHHHH-TTCCTTCCCTTSCCHHHHHHHHTC-
T ss_pred HHHCCCHHHHHHHHHcCCCCC-----CCCCCCCCHHHHHHHcCCH-HHHHHHHH-cCCCccccCCCCCCHHHHHHHhCc-
Confidence 999999999999999999998 8999999999999999999 99999999 599999999999999999999985
Q ss_pred ccCCchHHHHHHHHHcCCCCCccc
Q 004286 205 FRSGSHLGLCTGIIYHCISVDKLQ 228 (763)
Q Consensus 205 ~~~~~~~~iv~~Ll~~ga~~~~~~ 228 (763)
.+++++|+++|+++...+
T Consensus 148 ------~~~~~~L~~~~~~~~~~~ 165 (172)
T 3v30_A 148 ------RKVQQVIENHILKLFQSN 165 (172)
T ss_dssp ------HHHHHHHHHHHHHHSCC-
T ss_pred ------HHHHHHHHHHHHHHhccc
Confidence 799999999999887655
No 64
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.96 E-value=1.2e-28 Score=237.41 Aligned_cols=168 Identities=22% Similarity=0.257 Sum_probs=154.5
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHHHhhhhccccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCccCCCCCCCChHH
Q 004286 43 RSGGTALHIAVSDGQEEIVEDLVRIIHEKQQLKVLKIGDERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETPF 122 (763)
Q Consensus 43 ~~g~TpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~TpL 122 (763)
..+.+|||.||..|+.+++++|++.+. .+++.+|..|+||||+|+..|+.+++++|+++|++ ++.+|..|.|||
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~~~~-----~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L 76 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLDNTE-----NDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGAR-INVMNRGDDTPL 76 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHHCTT-----SCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhcCc-----ccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC-CCCcCCCCCCHH
Confidence 468899999999999999999999852 67899999999999999999999999999999998 999999999999
Q ss_pred HHHHHcCCHHHHHHHHHcCCCCCCCCccccCCCCChHHHHHHHcCChHHHHHHHHHhccccccccccCCCcHHHHHhcCC
Q 004286 123 FLAARHGHKDAFLCLHYLCASVDDGYNYSRRKNGETILHYAISGYYFVDLAFQIIHLYEKLVNFVNERGVSPLHLLATKP 202 (763)
Q Consensus 123 h~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~d~~G~TpLh~A~~~g~~~~iv~~LL~~~~~~~~~~d~~G~TpLh~A~~~~ 202 (763)
|+|+..|+.+++++|+++|++++ .+|..|.||||+|+..|+. +++++|++ .|++++.+|..|.||||+|+..+
T Consensus 77 ~~A~~~~~~~~v~~Ll~~g~~~~-----~~d~~g~t~L~~A~~~~~~-~~v~~Ll~-~ga~~~~~~~~g~tpl~~A~~~~ 149 (179)
T 3f6q_A 77 HLAASHGHRDIVQKLLQYKADIN-----AVNEHGNVPLHYACFWGQD-QVAEDLVA-NGALVSICNKYGEMPVDKAKAPL 149 (179)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTT-----CCCTTSCCHHHHHHHTTCH-HHHHHHHH-TTCCSSBCCTTSCCGGGGSCHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCCCC-----ccCCCCCCHHHHHHHcCCH-HHHHHHHH-CCCCcchhccCCCCcHHHHHHHH
Confidence 99999999999999999999998 8999999999999999999 99999999 59999999999999999999887
Q ss_pred CCccCCchHHHHHHHHHcCCCCCccccc
Q 004286 203 NAFRSGSHLGLCTGIIYHCISVDKLQEE 230 (763)
Q Consensus 203 ~~~~~~~~~~iv~~Ll~~ga~~~~~~~~ 230 (763)
+.+++++|+++|++++..+..
T Consensus 150 -------~~~~~~~L~~~g~~~~~~~~~ 170 (179)
T 3f6q_A 150 -------RELLRERAEKMGQNLNRIPYK 170 (179)
T ss_dssp -------HHHHHHHHHHTTCCCSCBCCC
T ss_pred -------HHHHHHHHHHhhcCcccCCcc
Confidence 479999999999999976643
No 65
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.96 E-value=3.2e-28 Score=230.03 Aligned_cols=159 Identities=20% Similarity=0.190 Sum_probs=148.1
Q ss_pred hhhhHHHHHHHHcCCHHHHHHHHccCCCccccccCCCCChHHHHHHHcCCHHHHHHHHHHhhhhccccccccCCCCCchH
Q 004286 8 DQLKKGLFKSAMKGKWNEVVENYGKDDRIHEARITRSGGTALHIAVSDGQEEIVEDLVRIIHEKQQLKVLKIGDERGSTP 87 (763)
Q Consensus 8 ~~~~~~L~~aa~~g~~~~v~~lL~~~~~~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~d~~g~Tp 87 (763)
+...++|+.|+..|+.+.++.++.. +.+++..|..|+||||+|+. |+.+++++|+++| ++++.+|..|+||
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~Ll~~--~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g------~~~~~~~~~g~t~ 73 (162)
T 1ihb_A 3 EPWGNELASAAARGDLEQLTSLLQN--NVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRG------ANPDLKDRTGFAV 73 (162)
T ss_dssp --CHHHHHHHHHHTCHHHHHHHTTS--CCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTT------CCTTCCCTTSCCH
T ss_pred chHhhHHHHHHHcCCHHHHHHHHhC--CCCccccCccCccHHHHHHc-CcHHHHHHHHHcC------CCCCCCCCCCCCH
Confidence 4568999999999999999999987 88899999999999999999 9999999999998 6789999999999
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCccCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCC-CCCCCccccCCCCChHHHHHHHc
Q 004286 88 LHIAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAARHGHKDAFLCLHYLCAS-VDDGYNYSRRKNGETILHYAISG 166 (763)
Q Consensus 88 Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~ga~-~~~~~~~~~d~~G~TpLh~A~~~ 166 (763)
||+|+..|+.+++++|+++|++ ++.+|..|+||||+|+..|+.+++++|+++|++ ++ .+|..|.||||+|+..
T Consensus 74 L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-----~~~~~g~t~l~~A~~~ 147 (162)
T 1ihb_A 74 IHDAARAGFLDTLQTLLEFQAD-VNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVG-----HRNHKGDTACDLARLY 147 (162)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTT-----CCCTTSCCHHHHHHHT
T ss_pred HHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCC-----CcCCCCCcHHHHHHHc
Confidence 9999999999999999999998 999999999999999999999999999999998 46 8999999999999999
Q ss_pred CChHHHHHHHHHhcccc
Q 004286 167 YYFVDLAFQIIHLYEKL 183 (763)
Q Consensus 167 g~~~~iv~~LL~~~~~~ 183 (763)
|+. +++++|+++ |++
T Consensus 148 ~~~-~~~~~Ll~~-GAd 162 (162)
T 1ihb_A 148 GRN-EVVSLMQAN-GAG 162 (162)
T ss_dssp TCH-HHHHHHHHT-C--
T ss_pred CCH-HHHHHHHHh-CCC
Confidence 999 999999994 764
No 66
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.95 E-value=2.1e-28 Score=232.19 Aligned_cols=161 Identities=20% Similarity=0.177 Sum_probs=141.1
Q ss_pred cCCCCChHHHHHHHcCCHHHHHHHHHHhhhhccccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCccCCCCCCCCh
Q 004286 41 ITRSGGTALHIAVSDGQEEIVEDLVRIIHEKQQLKVLKIGDERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENET 120 (763)
Q Consensus 41 ~d~~g~TpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~T 120 (763)
.|..|.||||.|+..|+.++++.|++.+. .+++..+..|+||||+|+..|+.+++++|+++|++ ++.+|..|+|
T Consensus 4 ~~~~~~~~l~~A~~~g~~~~v~~ll~~~~-----~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t 77 (165)
T 3twr_A 4 GNSEADRQLLEAAKAGDVETVKKLCTVQS-----VNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGAD-VHAKDKGGLV 77 (165)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHCCTTT-----TTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCC
T ss_pred CcchhhHHHHHHHHhCCHHHHHHHHHcCC-----CCccccccCCCCHHHHHHHcChHHHHHHHHhcCCC-CCccCCCCCC
Confidence 36678899999999999999999998642 56777888899999999999999999999999988 8999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCCCccccCCCCChHHHHHHHcCChHHHHHHHHHhccccccccccCCCcHHHHHhc
Q 004286 121 PFFLAARHGHKDAFLCLHYLCASVDDGYNYSRRKNGETILHYAISGYYFVDLAFQIIHLYEKLVNFVNERGVSPLHLLAT 200 (763)
Q Consensus 121 pLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~d~~G~TpLh~A~~~g~~~~iv~~LL~~~~~~~~~~d~~G~TpLh~A~~ 200 (763)
|||+|+..|+.+++++|+++|++++ .+|..|.||||+|+..|+. +++++|++ .|++++.+|.+|.||||+|+.
T Consensus 78 ~L~~A~~~~~~~~v~~Ll~~g~~~~-----~~~~~g~t~L~~A~~~~~~-~~v~~Ll~-~ga~~~~~~~~g~t~l~~a~~ 150 (165)
T 3twr_A 78 PLHNACSYGHYEVAELLVKHGAVVN-----VADLWKFTPLHEAAAKGKY-EICKLLLQ-HGADPTKKNRDGNTPLDLVKD 150 (165)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTT-----CCCTTCCCHHHHHHHTTCH-HHHHHHHH-TTCCTTCCCTTSCCTGGGSCT
T ss_pred HHHHHHHcCcHHHHHHHHhCCCCCC-----CcCCCCCCHHHHHHHcCCH-HHHHHHHH-cCCCCcccCCCCCChhHhHhc
Confidence 9999999999999999999999988 8899999999999999999 99999998 489999999999999999877
Q ss_pred CCCCccCCchHHHHHHHHHcCC
Q 004286 201 KPNAFRSGSHLGLCTGIIYHCI 222 (763)
Q Consensus 201 ~~~~~~~~~~~~iv~~Ll~~ga 222 (763)
++ .+++++|+++|+
T Consensus 151 -~~-------~~i~~~L~~~gA 164 (165)
T 3twr_A 151 -GD-------TDIQDLLRGDAA 164 (165)
T ss_dssp -TC-------HHHHHHHHTC--
T ss_pred -CC-------hHHHHHHhhccc
Confidence 43 699999998876
No 67
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.95 E-value=8.9e-28 Score=224.77 Aligned_cols=151 Identities=23% Similarity=0.235 Sum_probs=131.3
Q ss_pred CChHHHHHHHcCCHHHHHHHHHHhhhhccccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCccCCCCCCCChHHHH
Q 004286 45 GGTALHIAVSDGQEEIVEDLVRIIHEKQQLKVLKIGDERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETPFFL 124 (763)
Q Consensus 45 g~TpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~TpLh~ 124 (763)
..||||.|+..|+.+++++|++.|. +++ .|..|.||||+|+..|+.+++++|+++|++ ++.+|..|+||||+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~------~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~ 73 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGA------PFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVS-RDARTKVDRTPLHM 73 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTC------CCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCC-TTCCCTTCCCHHHH
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCC------CCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCCHHHH
Confidence 4588999999999999999999873 343 578889999999999999999999998888 88888899999999
Q ss_pred HHHcCCHHHHHHHHHcCCCCCCCCccccCCCCChHHHHHHHcCChHHHHHHHHHhccccccccccCCCcHHHHHhcCCCC
Q 004286 125 AARHGHKDAFLCLHYLCASVDDGYNYSRRKNGETILHYAISGYYFVDLAFQIIHLYEKLVNFVNERGVSPLHLLATKPNA 204 (763)
Q Consensus 125 A~~~g~~~~v~~Ll~~ga~~~~~~~~~~d~~G~TpLh~A~~~g~~~~iv~~LL~~~~~~~~~~d~~G~TpLh~A~~~~~~ 204 (763)
|+..|+.+++++|+++|++++ .+|..|.||||+|+..|+. +++++|++. |++++.+|.+|.||||+|+..|+
T Consensus 74 A~~~~~~~~v~~Ll~~g~~~~-----~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~-ga~~~~~~~~g~t~l~~A~~~~~- 145 (153)
T 1awc_B 74 AASEGHANIVEVLLKHGADVN-----AKDMLKMTALHWATEHNHQ-EVVELLIKY-GADVHTQSKFCKTAFDISIDNGN- 145 (153)
T ss_dssp HHHHTCHHHHHHHHTTTCCTT-----CCCTTSCCHHHHHHHTTCH-HHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTC-
T ss_pred HHHcChHHHHHHHHHcCCCCC-----CCCCCCCCHHHHHHHcCCH-HHHHHHHHc-CCCccccCCCCCCHHHHHHHcCC-
Confidence 999999999999999998888 7888999999999999998 999999984 88999999999999999999885
Q ss_pred ccCCchHHHHHHH
Q 004286 205 FRSGSHLGLCTGI 217 (763)
Q Consensus 205 ~~~~~~~~iv~~L 217 (763)
.+++++|
T Consensus 146 ------~~i~~~L 152 (153)
T 1awc_B 146 ------EDLAEIL 152 (153)
T ss_dssp ------HHHHHHH
T ss_pred ------HHHHHHh
Confidence 6888776
No 68
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.95 E-value=8.5e-30 Score=255.34 Aligned_cols=133 Identities=16% Similarity=0.017 Sum_probs=78.0
Q ss_pred CCCCCchHHHHHHHcCCHHHHHHHHhcCCCccCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCccccCCCCChH
Q 004286 80 GDERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAARHGHKDAFLCLHYLCASVDDGYNYSRRKNGETI 159 (763)
Q Consensus 80 ~d~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~d~~G~Tp 159 (763)
.+..|.||||+|+..|+.+++++|++.|++ ++.+|..|+||||+|+..|+.+++++|+++|++++ .+|..|+||
T Consensus 17 ~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n-----~~d~~g~tp 90 (229)
T 2vge_A 17 ARLNPLVLLLDAALTGELEVVQQAVKEMND-PSQPNEEGITALHNAICGANYSIVDFLITAGANVN-----SPDSHGWTP 90 (229)
T ss_dssp TTSCHHHHHHHHHHHTCHHHHHHHHHHSSC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-----CCCTTCCCH
T ss_pred cccchhHHHHHHHHcCCHHHHHHHHhcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC-----CCCCCCCCH
Confidence 344455566666666666666666666555 55566666666666666666666666666666555 555666666
Q ss_pred HHHHHHcCChHHHHHHHHHhccccccccc-cCCCcHHHHH--hcCCCCccCCchHHHHHHHHHcCCCCCcc
Q 004286 160 LHYAISGYYFVDLAFQIIHLYEKLVNFVN-ERGVSPLHLL--ATKPNAFRSGSHLGLCTGIIYHCISVDKL 227 (763)
Q Consensus 160 Lh~A~~~g~~~~iv~~LL~~~~~~~~~~d-~~G~TpLh~A--~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~ 227 (763)
||+|+..|+. +++++|++ .|++++..+ .+|.||||+| +..+ +.+++++|+++|++++..
T Consensus 91 Lh~A~~~g~~-~~v~~Ll~-~ga~~~~~~~~~g~tpL~~A~a~~~~-------~~~~v~~Ll~~ga~~~~~ 152 (229)
T 2vge_A 91 LHCAASCNDT-VICMALVQ-HGAAIFATTLSDGATAFEKCDPYREG-------YADCATYLADVEQSMGLM 152 (229)
T ss_dssp HHHHHHTTCH-HHHHHHHT-TTCCTTCCCSSTTCCTGGGCCTTSTT-------HHHHHHHHHHHHHHTTTS
T ss_pred HHHHHHcCCH-HHHHHHHH-cCCCcccccCCCCCCHHHHHHHHhcC-------hHHHHHHHHHcCCCcccc
Confidence 6666666666 66666665 355666554 4566666666 4444 345555555555555543
No 69
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.95 E-value=2.2e-27 Score=226.09 Aligned_cols=154 Identities=29% Similarity=0.329 Sum_probs=148.3
Q ss_pred hhHHHHHHHHcCCHHHHHHHHccCCCccccccCCCCChHHHHHHHcCCHHHHHHHHHHhhhhccccccccCCCCCchHHH
Q 004286 10 LKKGLFKSAMKGKWNEVVENYGKDDRIHEARITRSGGTALHIAVSDGQEEIVEDLVRIIHEKQQLKVLKIGDERGSTPLH 89 (763)
Q Consensus 10 ~~~~L~~aa~~g~~~~v~~lL~~~~~~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~d~~g~TpLh 89 (763)
..++|+.||..|+.+.++.++.. +++++..|..|+||||+|+..|+.+++++|+++| ++++.+|..|+||||
T Consensus 14 ~~~~l~~A~~~g~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g------~~~~~~~~~g~t~L~ 85 (169)
T 2y1l_E 14 LGKKLLEAARAGRDDEVRILMAN--GADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNG------ADVNAVDHAGMTPLR 85 (169)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT------CCTTCCCTTSCCHHH
T ss_pred ccchHHHHHHcCCHHHHHHHHHC--CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC------CCCCccCCCCCCHHH
Confidence 47899999999999999999998 8899999999999999999999999999999988 678999999999999
Q ss_pred HHHHcCCHHHHHHHHhcCCCccCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCccccCCCCChHHHHHHHcCCh
Q 004286 90 IAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAARHGHKDAFLCLHYLCASVDDGYNYSRRKNGETILHYAISGYYF 169 (763)
Q Consensus 90 ~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~d~~G~TpLh~A~~~g~~ 169 (763)
+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..|+.+++++|+++|++++ .+|..|.||||+|+..|+.
T Consensus 86 ~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-----~~~~~g~t~l~~A~~~~~~ 159 (169)
T 2y1l_E 86 LAALFGHLEIVEVLLKNGAD-VNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVN-----AQDKFGKTAFDISIDNGNE 159 (169)
T ss_dssp HHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-----CCCTTSCCHHHHHHHTTCH
T ss_pred HHHHcCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-----CcCCCCCCHHHHHHHhCCH
Confidence 99999999999999999998 99999999999999999999999999999999998 8999999999999999999
Q ss_pred HHHHHHHHH
Q 004286 170 VDLAFQIIH 178 (763)
Q Consensus 170 ~~iv~~LL~ 178 (763)
+++++|++
T Consensus 160 -~~~~~L~~ 167 (169)
T 2y1l_E 160 -DLAEILQK 167 (169)
T ss_dssp -HHHHHHHT
T ss_pred -HHHHHHHH
Confidence 99999997
No 70
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.95 E-value=7.2e-30 Score=273.44 Aligned_cols=168 Identities=14% Similarity=0.041 Sum_probs=139.3
Q ss_pred hHHHHHHHHcCCHHHHHHHHccCCCc---cccccCCCCChHHHHHHHcCCHHHHHHHHHHhhhhccccccccCCCCCchH
Q 004286 11 KKGLFKSAMKGKWNEVVENYGKDDRI---HEARITRSGGTALHIAVSDGQEEIVEDLVRIIHEKQQLKVLKIGDERGSTP 87 (763)
Q Consensus 11 ~~~L~~aa~~g~~~~v~~lL~~~~~~---~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~d~~g~Tp 87 (763)
.+|||.||..|+.+.|+.++.. +. ..+..+..|.||||+||..|+.++|++|+++|++.. ..+..+.+ +||
T Consensus 93 ~T~Lh~Aa~~G~~e~v~~Ll~~--ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~---~~~i~~~~-~Tp 166 (376)
T 2aja_A 93 EVICFVAAITGCSSALDTLCLL--LTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEI---MAMIQAEN-YHA 166 (376)
T ss_dssp HHHHHHHHHHCCHHHHHHHTTC----CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTH---HHHHSHHH-HHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHc--CCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCcc---ccccCCCC-CCH
Confidence 5999999999999999999887 44 222346678999999999999999999999984210 01222223 999
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCccCC--CCCCCChHHHHHH-HcCCHHHHHHHHHcCCCCCCCCccccCCCCChHHHHHH
Q 004286 88 LHIAAGLGNVSMCKCIATADPRLIGE--RNHENETPFFLAA-RHGHKDAFLCLHYLCASVDDGYNYSRRKNGETILHYAI 164 (763)
Q Consensus 88 Lh~Aa~~g~~~~v~~Ll~~~~~~~~~--~~~~g~TpLh~A~-~~g~~~~v~~Ll~~ga~~~~~~~~~~d~~G~TpLh~A~ 164 (763)
||+||..|+.++|++|+++|++ ++. .|..|.||||+|+ ..|+.++|++|+++|+ .|.||||+|+
T Consensus 167 Lh~Aa~~G~~eiv~~Ll~~ga~-~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga------------~~~taL~~Aa 233 (376)
T 2aja_A 167 FRLAAENGHLHVLNRLCELAPT-EATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPV------------MLAYAEIHEF 233 (376)
T ss_dssp HHHHHHTTCHHHHHHHHHSCGG-GHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHH------------HHHHHHHCTT
T ss_pred HHHHHHCCCHHHHHHHHHcCCc-cchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCC------------ccchHHHHHH
Confidence 9999999999999999999998 776 8889999999999 9999999999999764 2789999999
Q ss_pred HcCChHHHHHHHHHhccccccccccCCCcHHHHHhcCCC
Q 004286 165 SGYYFVDLAFQIIHLYEKLVNFVNERGVSPLHLLATKPN 203 (763)
Q Consensus 165 ~~g~~~~iv~~LL~~~~~~~~~~d~~G~TpLh~A~~~~~ 203 (763)
.+|+. +++++|++. |++++..+ ++++.|+..|.
T Consensus 234 ~~g~~-evv~lL~~~-ga~~~~~~----~~l~~A~~~g~ 266 (376)
T 2aja_A 234 EYGEK-YVNPFIARH-VNRLKEMH----DAFKLSNPDGV 266 (376)
T ss_dssp TTTTT-THHHHHHHH-HHHHHHHH----TTTTTTSSSSC
T ss_pred HCCCH-HHHHHHHhc-Cccccccc----HHHHHHHHCCC
Confidence 99999 999999995 88887655 47888888875
No 71
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.95 E-value=2.7e-27 Score=221.52 Aligned_cols=151 Identities=23% Similarity=0.238 Sum_probs=143.2
Q ss_pred hhHHHHHHHHcCCHHHHHHHHccCCCccccccCCCCChHHHHHHHcCCHHHHHHHHHHhhhhccccccccCCCCCchHHH
Q 004286 10 LKKGLFKSAMKGKWNEVVENYGKDDRIHEARITRSGGTALHIAVSDGQEEIVEDLVRIIHEKQQLKVLKIGDERGSTPLH 89 (763)
Q Consensus 10 ~~~~L~~aa~~g~~~~v~~lL~~~~~~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~d~~g~TpLh 89 (763)
..++|+.|+..|+.+.++.++.. +.+.+ .|..|+||||+|+..|+.+++++|++.| ++++.+|..|+||||
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~--g~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g------~~~~~~~~~g~t~L~ 72 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMAN--GAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAG------VSRDARTKVDRTPLH 72 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHH--TCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTT------CCTTCCCTTCCCHHH
T ss_pred ccHHHHHHHHcCCHHHHHHHHHc--CCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcC------CCCCCCCCCCCCHHH
Confidence 57899999999999999999998 66665 5889999999999999999999999988 678999999999999
Q ss_pred HHHHcCCHHHHHHHHhcCCCccCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCccccCCCCChHHHHHHHcCCh
Q 004286 90 IAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAARHGHKDAFLCLHYLCASVDDGYNYSRRKNGETILHYAISGYYF 169 (763)
Q Consensus 90 ~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~d~~G~TpLh~A~~~g~~ 169 (763)
+|+..|+.+++++|+++|++ ++.+|..|+||||+|+..|+.+++++|+++|++++ .+|..|.||||+|+..|+.
T Consensus 73 ~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-----~~~~~g~t~l~~A~~~~~~ 146 (153)
T 1awc_B 73 MAASEGHANIVEVLLKHGAD-VNAKDMLKMTALHWATEHNHQEVVELLIKYGADVH-----TQSKFCKTAFDISIDNGNE 146 (153)
T ss_dssp HHHHHTCHHHHHHHHTTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-----CCCTTSCCHHHHHHHTTCH
T ss_pred HHHHcChHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc-----ccCCCCCCHHHHHHHcCCH
Confidence 99999999999999999998 99999999999999999999999999999999998 8999999999999999999
Q ss_pred HHHHHHH
Q 004286 170 VDLAFQI 176 (763)
Q Consensus 170 ~~iv~~L 176 (763)
+++++|
T Consensus 147 -~i~~~L 152 (153)
T 1awc_B 147 -DLAEIL 152 (153)
T ss_dssp -HHHHHH
T ss_pred -HHHHHh
Confidence 999886
No 72
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.95 E-value=1.4e-27 Score=224.19 Aligned_cols=154 Identities=19% Similarity=0.193 Sum_probs=114.5
Q ss_pred CChHHHHHHHcCCHHHHHHHHHHhhhhccccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCccCCCCCCCChHHHH
Q 004286 45 GGTALHIAVSDGQEEIVEDLVRIIHEKQQLKVLKIGDERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETPFFL 124 (763)
Q Consensus 45 g~TpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~TpLh~ 124 (763)
|.||||.|+..|+.++++.|++.. ..+++.+|..|+||||+ +..|+.+++++|+++|++ ++.+|..|.||||+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~-----~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~ 74 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRE-----LVHPDALNRFGKTALQV-MMFGSTAIALELLKQGAS-PNVQDTSGTSPVHD 74 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTT-----CCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHH
T ss_pred cchHHHHHHHhCCHHHHHHHHHhh-----CcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCC-CCCcCCCCCCHHHH
Confidence 457777777777777777777762 14567777777777777 777777777777777776 77777777777777
Q ss_pred HHHcCCHHHHHHHHHcCCCCCCCCccccCCCCChHHHHHHHcCChHHHHHHHHHhccccccccccCCCcHHHHHhcCCCC
Q 004286 125 AARHGHKDAFLCLHYLCASVDDGYNYSRRKNGETILHYAISGYYFVDLAFQIIHLYEKLVNFVNERGVSPLHLLATKPNA 204 (763)
Q Consensus 125 A~~~g~~~~v~~Ll~~ga~~~~~~~~~~d~~G~TpLh~A~~~g~~~~iv~~LL~~~~~~~~~~d~~G~TpLh~A~~~~~~ 204 (763)
|+..|+.+++++|+++|++++ .+|..|.||||+|+..|+. +++++|++. ++++.+|.+|.||||+|+..++
T Consensus 75 A~~~~~~~~v~~Ll~~g~~~~-----~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~--~~~~~~~~~g~t~l~~A~~~~~- 145 (156)
T 1bd8_A 75 AARTGFLDTLKVLVEHGADVN-----VPDGTGALPIHLAVQEGHT-AVVSFLAAE--SDLHRRDARGLTPLELALQRGA- 145 (156)
T ss_dssp HHHTTCHHHHHHHHHTTCCSC-----CCCTTSCCHHHHHHHHTCH-HHHHHHHTT--SCTTCCCTTSCCHHHHHHHSCC-
T ss_pred HHHcCcHHHHHHHHHcCCCCC-----CcCCCCCcHHHHHHHhChH-HHHHHHHhc--cCCCCcCCCCCCHHHHHHHcCc-
Confidence 777777777777777777777 6777777777777777777 777777774 6777777777777777777764
Q ss_pred ccCCchHHHHHHHHHc
Q 004286 205 FRSGSHLGLCTGIIYH 220 (763)
Q Consensus 205 ~~~~~~~~iv~~Ll~~ 220 (763)
.+++++|+++
T Consensus 146 ------~~~v~~Ll~~ 155 (156)
T 1bd8_A 146 ------QDLVDILQGH 155 (156)
T ss_dssp ------HHHHHHHHTT
T ss_pred ------HHHHHHHHhh
Confidence 5777777653
No 73
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.95 E-value=2.1e-27 Score=225.71 Aligned_cols=157 Identities=17% Similarity=0.119 Sum_probs=149.5
Q ss_pred hHHHHHHHHcCCHHHHHHHHccCCCccccccCCCCChHHHHHHHcCCHHHHHHHHHHhhhhccccccccCCCCCchHHHH
Q 004286 11 KKGLFKSAMKGKWNEVVENYGKDDRIHEARITRSGGTALHIAVSDGQEEIVEDLVRIIHEKQQLKVLKIGDERGSTPLHI 90 (763)
Q Consensus 11 ~~~L~~aa~~g~~~~v~~lL~~~~~~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~d~~g~TpLh~ 90 (763)
.++||.||..|+.+.++.++.. +.+++..|..|+||||+|+..|+.+++++|+++| ++++.+|..|.||||+
T Consensus 4 ~t~L~~A~~~g~~~~v~~ll~~--~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g------~~~~~~~~~g~t~L~~ 75 (167)
T 3v31_A 4 SLSVHQLAAQGEMLYLATRIEQ--ENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNG------ADPQLLGKGRESALSL 75 (167)
T ss_dssp CCCHHHHHHTTCHHHHHHHHHH--SSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT------CCTTCCCTTCCCHHHH
T ss_pred cchHHHHHHCCCHHHHHHHHHc--CCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcC------CCCCCcCCCCCcHHHH
Confidence 5789999999999999999988 7889999999999999999999999999999998 6788999999999999
Q ss_pred HHHcCCHHHHHHHHhcCCCccCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCccccCCCCChHHHHHHHcCChH
Q 004286 91 AAGLGNVSMCKCIATADPRLIGERNHENETPFFLAARHGHKDAFLCLHYLCASVDDGYNYSRRKNGETILHYAISGYYFV 170 (763)
Q Consensus 91 Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~d~~G~TpLh~A~~~g~~~ 170 (763)
|+..|+.+++++|+++|++ ++.+|..|.||||+|+..|+.+++++|+++|++++ .+|..|.||||+|+..|+.
T Consensus 76 A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-----~~~~~g~t~l~~A~~~~~~- 148 (167)
T 3v31_A 76 ACSKGYTDIVKMLLDCGVD-VNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPT-----IETDSGYNSMDLAVALGYR- 148 (167)
T ss_dssp HHHHTCHHHHHHHHHHTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-----CCCTTSCCHHHHHHHHTCH-
T ss_pred HHHcCCHHHHHHHHHCCCC-CCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-----CcCCCCCCHHHHHHHcCcH-
Confidence 9999999999999999998 99999999999999999999999999999999998 8999999999999999999
Q ss_pred HHHHHHHHhcccc
Q 004286 171 DLAFQIIHLYEKL 183 (763)
Q Consensus 171 ~iv~~LL~~~~~~ 183 (763)
+++++|+++ +.+
T Consensus 149 ~~~~~L~~~-~~~ 160 (167)
T 3v31_A 149 SVQQVIESH-LLK 160 (167)
T ss_dssp HHHHHHHHH-HHH
T ss_pred HHHHHHHHH-HHH
Confidence 999999995 443
No 74
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.95 E-value=2.6e-29 Score=251.83 Aligned_cols=112 Identities=18% Similarity=0.180 Sum_probs=93.2
Q ss_pred HHHHHhcCCCccCC---CCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCccccCCCCChHHHHHHHcCChHHHHHHH
Q 004286 100 CKCIATADPRLIGE---RNHENETPFFLAARHGHKDAFLCLHYLCASVDDGYNYSRRKNGETILHYAISGYYFVDLAFQI 176 (763)
Q Consensus 100 v~~Ll~~~~~~~~~---~~~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~d~~G~TpLh~A~~~g~~~~iv~~L 176 (763)
++.|++++++ ++. .+..|.||||+|+..|+.+++++|+++|++++ .+|..|+||||+|+..|+. +++++|
T Consensus 1 v~~ll~~~~~-~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~-----~~d~~g~tpLh~A~~~g~~-~~v~~L 73 (229)
T 2vge_A 1 MRSVLRKAGS-PRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPS-----QPNEEGITALHNAICGANY-SIVDFL 73 (229)
T ss_dssp ---------C-CCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTT-----CCCTTSCCHHHHHHHTTCH-HHHHHH
T ss_pred CeehhccCCC-CccccccccchhHHHHHHHHcCCHHHHHHHHhcCCCCC-----CCCCCCCCHHHHHHHcCCH-HHHHHH
Confidence 4678888876 443 45567789999999999999999999999998 8999999999999999999 999999
Q ss_pred HHhccccccccccCCCcHHHHHhcCCCCccCCchHHHHHHHHHcCCCCCc
Q 004286 177 IHLYEKLVNFVNERGVSPLHLLATKPNAFRSGSHLGLCTGIIYHCISVDK 226 (763)
Q Consensus 177 L~~~~~~~~~~d~~G~TpLh~A~~~~~~~~~~~~~~iv~~Ll~~ga~~~~ 226 (763)
++. |++++.+|..|.||||+|+..|+ .+++++|+++|++++.
T Consensus 74 l~~-ga~~n~~d~~g~tpLh~A~~~g~-------~~~v~~Ll~~ga~~~~ 115 (229)
T 2vge_A 74 ITA-GANVNSPDSHGWTPLHCAASCND-------TVICMALVQHGAAIFA 115 (229)
T ss_dssp HHT-TCCTTCCCTTCCCHHHHHHHTTC-------HHHHHHHHTTTCCTTC
T ss_pred HHC-CCCCCCCCCCCCCHHHHHHHcCC-------HHHHHHHHHcCCCccc
Confidence 995 99999999999999999999985 6999999988887764
No 75
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.95 E-value=1.1e-27 Score=230.62 Aligned_cols=168 Identities=19% Similarity=0.163 Sum_probs=156.1
Q ss_pred hhhHHHHHHHHcCCHHHHHHHHccCCCccccccCCCCChHHHHHHHcCCHHHHHHHHHHhhhhccccccccCCCCCchHH
Q 004286 9 QLKKGLFKSAMKGKWNEVVENYGKDDRIHEARITRSGGTALHIAVSDGQEEIVEDLVRIIHEKQQLKVLKIGDERGSTPL 88 (763)
Q Consensus 9 ~~~~~L~~aa~~g~~~~v~~lL~~~~~~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~d~~g~TpL 88 (763)
+..++|+.|+..|+.+.++.++... +.+++..|..|+||||+||..|+.+++++|+++| ++++.+|..|+|||
T Consensus 4 ~~~~~l~~A~~~g~~~~v~~ll~~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g------~~~~~~~~~g~t~L 76 (179)
T 3f6q_A 4 EFMDDIFTQCREGNAVAVRLWLDNT-ENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRG------ARINVMNRGDDTPL 76 (179)
T ss_dssp ---CCHHHHHHHTCHHHHHHHHHCT-TSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT------CCTTCCCTTCCCHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHhcC-cccccccCCCCCCHHHHHHHcCcHHHHHHHHHcC------CCCCCcCCCCCCHH
Confidence 4567899999999999999999874 6778889999999999999999999999999998 77899999999999
Q ss_pred HHHHHcCCHHHHHHHHhcCCCccCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCccccCCCCChHHHHHHHcCC
Q 004286 89 HIAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAARHGHKDAFLCLHYLCASVDDGYNYSRRKNGETILHYAISGYY 168 (763)
Q Consensus 89 h~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~d~~G~TpLh~A~~~g~ 168 (763)
|+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..|+.+++++|+++|++++ .+|..|.||||+|+..++
T Consensus 77 ~~A~~~~~~~~v~~Ll~~g~~-~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-----~~~~~g~tpl~~A~~~~~ 150 (179)
T 3f6q_A 77 HLAASHGHRDIVQKLLQYKAD-INAVNEHGNVPLHYACFWGQDQVAEDLVANGALVS-----ICNKYGEMPVDKAKAPLR 150 (179)
T ss_dssp HHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSS-----BCCTTSCCGGGGSCHHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCC-CCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcc-----hhccCCCCcHHHHHHHHH
Confidence 999999999999999999998 99999999999999999999999999999999998 899999999999999999
Q ss_pred hHHHHHHHHHhccccccccccCC
Q 004286 169 FVDLAFQIIHLYEKLVNFVNERG 191 (763)
Q Consensus 169 ~~~iv~~LL~~~~~~~~~~d~~G 191 (763)
. +++++|++ .|++++..+..+
T Consensus 151 ~-~~~~~L~~-~g~~~~~~~~~~ 171 (179)
T 3f6q_A 151 E-LLRERAEK-MGQNLNRIPYKD 171 (179)
T ss_dssp H-HHHHHHHH-TTCCCSCBCCCC
T ss_pred H-HHHHHHHH-hhcCcccCCccc
Confidence 9 99999999 599998877655
No 76
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.95 E-value=5.3e-27 Score=220.18 Aligned_cols=154 Identities=23% Similarity=0.273 Sum_probs=146.4
Q ss_pred hhHHHHHHHHcCCHHHHHHHHccCCCccccccCCCCChHHHHHHHcCCHHHHHHHHHHhhhhccccccccCCCCCchHHH
Q 004286 10 LKKGLFKSAMKGKWNEVVENYGKDDRIHEARITRSGGTALHIAVSDGQEEIVEDLVRIIHEKQQLKVLKIGDERGSTPLH 89 (763)
Q Consensus 10 ~~~~L~~aa~~g~~~~v~~lL~~~~~~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~d~~g~TpLh 89 (763)
..++|+.|+..|+.+.++.++.. .+.+++..|..|+||||+ |..|+.+++++|+++| ++++.+|..|+||||
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~-~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g------~~~~~~~~~g~t~L~ 73 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHR-ELVHPDALNRFGKTALQV-MMFGSTAIALELLKQG------ASPNVQDTSGTSPVH 73 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHT-TCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTT------CCTTCCCTTSCCHHH
T ss_pred cchHHHHHHHhCCHHHHHHHHHh-hCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCC------CCCCCcCCCCCCHHH
Confidence 36899999999999999999988 567889999999999999 9999999999999998 678999999999999
Q ss_pred HHHHcCCHHHHHHHHhcCCCccCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCccccCCCCChHHHHHHHcCCh
Q 004286 90 IAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAARHGHKDAFLCLHYLCASVDDGYNYSRRKNGETILHYAISGYYF 169 (763)
Q Consensus 90 ~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~d~~G~TpLh~A~~~g~~ 169 (763)
+|+..|+.+++++|+++|++ ++.+|..|+||||+|+..|+.+++++|+++ ++++ .+|.+|.||||+|+..|+.
T Consensus 74 ~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~-----~~~~~g~t~l~~A~~~~~~ 146 (156)
T 1bd8_A 74 DAARTGFLDTLKVLVEHGAD-VNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLH-----RRDARGLTPLELALQRGAQ 146 (156)
T ss_dssp HHHHTTCHHHHHHHHHTTCC-SCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTT-----CCCTTSCCHHHHHHHSCCH
T ss_pred HHHHcCcHHHHHHHHHcCCC-CCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCC-----CcCCCCCCHHHHHHHcCcH
Confidence 99999999999999999998 999999999999999999999999999999 8888 8999999999999999999
Q ss_pred HHHHHHHHHh
Q 004286 170 VDLAFQIIHL 179 (763)
Q Consensus 170 ~~iv~~LL~~ 179 (763)
+++++|+++
T Consensus 147 -~~v~~Ll~~ 155 (156)
T 1bd8_A 147 -DLVDILQGH 155 (156)
T ss_dssp -HHHHHHHTT
T ss_pred -HHHHHHHhh
Confidence 999999974
No 77
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.95 E-value=3.3e-27 Score=229.98 Aligned_cols=155 Identities=23% Similarity=0.180 Sum_probs=148.9
Q ss_pred hhHHHHHHHHcCCHHHHHHHHccCCCccccccCCCCChHHHHHHHcCCHHHHHHHHHHhhhhccccccccCCCCCchHHH
Q 004286 10 LKKGLFKSAMKGKWNEVVENYGKDDRIHEARITRSGGTALHIAVSDGQEEIVEDLVRIIHEKQQLKVLKIGDERGSTPLH 89 (763)
Q Consensus 10 ~~~~L~~aa~~g~~~~v~~lL~~~~~~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~d~~g~TpLh 89 (763)
..+|||.|+..|+.+.++.++.. +.+++..|..|+||||+|+..|+.+++++|+++| ++++.+|..|+||||
T Consensus 35 g~t~L~~A~~~g~~~~v~~Ll~~--~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g------~~~~~~~~~g~t~L~ 106 (192)
T 2rfm_A 35 NRTPLMVACMLGMENAIDKLVEN--FDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKG------SNVNTKDFSGKTPLM 106 (192)
T ss_dssp CCCHHHHHHHHTCGGGHHHHHHH--HCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHT------CCTTCCCTTSCCHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHh--ccccccccccCccHHHHHHHcCCHHHHHHHHHCC------CCCCCCCCCCCcHHH
Confidence 46899999999999999999988 7888999999999999999999999999999998 678999999999999
Q ss_pred HHHHcCCHHHHHHHHhcCCCccCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCccccCCCCChHHHHHHHcCCh
Q 004286 90 IAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAARHGHKDAFLCLHYLCASVDDGYNYSRRKNGETILHYAISGYYF 169 (763)
Q Consensus 90 ~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~d~~G~TpLh~A~~~g~~ 169 (763)
+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..|+.+++++|+++|++++ .+|..|.||||+|+..|+.
T Consensus 107 ~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-----~~~~~g~t~l~~A~~~~~~ 180 (192)
T 2rfm_A 107 WSIIFGYSEMSYFLLEHGAN-VNDRNLEGETPLIVASKYGRSEIVKKLLELGADIS-----ARDLTGLTAEASARIFGRQ 180 (192)
T ss_dssp HHHHHTCHHHHHHHHHTTCC-SSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTT-----CBCTTSCBHHHHHHHTTCH
T ss_pred HHHHcCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC-----CcCCCCCCHHHHHHHhCcH
Confidence 99999999999999999998 99999999999999999999999999999999998 8999999999999999999
Q ss_pred HHHHHHHHHh
Q 004286 170 VDLAFQIIHL 179 (763)
Q Consensus 170 ~~iv~~LL~~ 179 (763)
+++++|++.
T Consensus 181 -~~v~~Ll~~ 189 (192)
T 2rfm_A 181 -EVIKIFTEV 189 (192)
T ss_dssp -HHHHHHHHH
T ss_pred -HHHHHHHhc
Confidence 999999985
No 78
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.94 E-value=5.2e-27 Score=222.53 Aligned_cols=159 Identities=19% Similarity=0.183 Sum_probs=147.3
Q ss_pred hhhhHHHHHHHHcCCHHHHHHHHccCCCccccccCCCCChHHHHHHHcCCHHHHHHHHHHhhhhccccccccCCCCCchH
Q 004286 8 DQLKKGLFKSAMKGKWNEVVENYGKDDRIHEARITRSGGTALHIAVSDGQEEIVEDLVRIIHEKQQLKVLKIGDERGSTP 87 (763)
Q Consensus 8 ~~~~~~L~~aa~~g~~~~v~~lL~~~~~~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~d~~g~Tp 87 (763)
.+..++|+.|+..|+.+.++.++... +.+.+..+..|+||||+|+..|+.+++++|+++| ++++.+|..|+||
T Consensus 6 ~~~~~~l~~A~~~g~~~~v~~ll~~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g------~~~~~~~~~g~t~ 78 (165)
T 3twr_A 6 SEADRQLLEAAKAGDVETVKKLCTVQ-SVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHG------ADVHAKDKGGLVP 78 (165)
T ss_dssp CHHHHHHHHHHHHTCHHHHHHHCCTT-TTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTT------CCTTCCCTTSCCH
T ss_pred chhhHHHHHHHHhCCHHHHHHHHHcC-CCCccccccCCCCHHHHHHHcChHHHHHHHHhcC------CCCCccCCCCCCH
Confidence 34688999999999999999998864 6777888999999999999999999999999998 6789999999999
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCccCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCccccCCCCChHHHHHHHcC
Q 004286 88 LHIAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAARHGHKDAFLCLHYLCASVDDGYNYSRRKNGETILHYAISGY 167 (763)
Q Consensus 88 Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~d~~G~TpLh~A~~~g 167 (763)
||+|+..|+.+++++|+++|++ ++.+|..|+||||+|+..|+.+++++|+++|++++ .+|.+|.||||+|+. +
T Consensus 79 L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-----~~~~~g~t~l~~a~~-~ 151 (165)
T 3twr_A 79 LHNACSYGHYEVAELLVKHGAV-VNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPT-----KKNRDGNTPLDLVKD-G 151 (165)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-----CCCTTSCCTGGGSCT-T
T ss_pred HHHHHHcCcHHHHHHHHhCCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCc-----ccCCCCCChhHhHhc-C
Confidence 9999999999999999999999 99999999999999999999999999999999998 899999999999877 8
Q ss_pred ChHHHHHHHHHhccc
Q 004286 168 YFVDLAFQIIHLYEK 182 (763)
Q Consensus 168 ~~~~iv~~LL~~~~~ 182 (763)
+. +++++|+++ |+
T Consensus 152 ~~-~i~~~L~~~-gA 164 (165)
T 3twr_A 152 DT-DIQDLLRGD-AA 164 (165)
T ss_dssp CH-HHHHHHHTC---
T ss_pred Ch-HHHHHHhhc-cc
Confidence 99 999999984 53
No 79
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.94 E-value=3.6e-27 Score=238.23 Aligned_cols=166 Identities=13% Similarity=0.018 Sum_probs=123.5
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHHhhhhccccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCccCCCCCCCChH
Q 004286 42 TRSGGTALHIAVSDGQEEIVEDLVRIIHEKQQLKVLKIGDERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETP 121 (763)
Q Consensus 42 d~~g~TpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~Tp 121 (763)
+..|.||||.|++.|+.+.++.|+++|+ +++. +..|.||||+|+..|+.++++.|++.|++ ++.+|..|.||
T Consensus 2 ~~~g~t~L~~a~~~~~~~~~~~ll~~g~------~~~~-~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~d~~g~t~ 73 (239)
T 1ycs_B 2 EITGQVSLPPGKRTNLRKTGSERIAHGM------RVKF-NPLPLALLLDSSLEGEFDLVQRIIYEVDD-PSLPNDEGITA 73 (239)
T ss_dssp ------------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSS-CCCCCTTSCCH
T ss_pred CccccccCchhhhhhhHHHHHHHhccCC------Cccc-CchhhHHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCH
Confidence 3569999999999999999999999994 4554 47799999999999999999999999997 99999999999
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCCCccccCCCCChHHHHHHHcCChHHHHHHHHHhccccccccccCCC-cHHHHH--
Q 004286 122 FFLAARHGHKDAFLCLHYLCASVDDGYNYSRRKNGETILHYAISGYYFVDLAFQIIHLYEKLVNFVNERGV-SPLHLL-- 198 (763)
Q Consensus 122 Lh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~d~~G~TpLh~A~~~g~~~~iv~~LL~~~~~~~~~~d~~G~-TpLh~A-- 198 (763)
||+|+..|+.+++++|+++|++++ .+|..|+||||+|+..|+. +++++|++ .|++++..+..|. ||||+|
T Consensus 74 L~~A~~~g~~~~v~~Ll~~ga~~~-----~~d~~g~tpL~~A~~~~~~-~~v~~Ll~-~ga~~~~~~~~~~~t~l~~a~~ 146 (239)
T 1ycs_B 74 LHNAVCAGHTEIVKFLVQFGVNVN-----AADSDGWTPLHCAASCNNV-QVCKFLVE-SGAAVFAMTYSDMQTAADKCEE 146 (239)
T ss_dssp HHHHHHHTCHHHHHHHHHHTCCTT-----CCCTTCCCHHHHHHHTTCH-HHHHHHHH-TTCCTTCCCSSSCCCHHHHCCS
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCC-----ccCCCCCCHHHHHHHcCCH-HHHHHHHH-cCCCcceecCCCCcchHHHHHH
Confidence 999999999999999999999999 8999999999999999999 99999999 5999999998887 999999
Q ss_pred hcCCCCccCCchHHHHHHHHHcCCCCCcccc
Q 004286 199 ATKPNAFRSGSHLGLCTGIIYHCISVDKLQE 229 (763)
Q Consensus 199 ~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~ 229 (763)
+..|+ .+++++|+++|++++..+.
T Consensus 147 ~~~g~-------~~~~~~Ll~~~a~~~~~~~ 170 (239)
T 1ycs_B 147 MEEGY-------TQCSQFLYGVQEKMGIMNK 170 (239)
T ss_dssp SSTTC-------CCHHHHHHHHHHHTTTTGG
T ss_pred hhhcc-------HHHHHHHHHhhhccccccc
Confidence 66664 5999999999999987654
No 80
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.93 E-value=5.1e-27 Score=237.15 Aligned_cols=177 Identities=12% Similarity=0.070 Sum_probs=134.3
Q ss_pred hhHHHHHHHHcCCHHHHHHHHccCCCccccccCCCCChHHHHHHHcCCHHHHHHHHHHhhhhccccccccCCCCCchHHH
Q 004286 10 LKKGLFKSAMKGKWNEVVENYGKDDRIHEARITRSGGTALHIAVSDGQEEIVEDLVRIIHEKQQLKVLKIGDERGSTPLH 89 (763)
Q Consensus 10 ~~~~L~~aa~~g~~~~v~~lL~~~~~~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~d~~g~TpLh 89 (763)
..+||+.|+..|+.+.+..++.. |++++. +..|.||||+|+..|+.+++++|++.| ++++.+|..|+||||
T Consensus 5 g~t~L~~a~~~~~~~~~~~ll~~--g~~~~~-~~~~~t~L~~A~~~g~~~~v~~Ll~~g------~~~~~~d~~g~t~L~ 75 (239)
T 1ycs_B 5 GQVSLPPGKRTNLRKTGSERIAH--GMRVKF-NPLPLALLLDSSLEGEFDLVQRIIYEV------DDPSLPNDEGITALH 75 (239)
T ss_dssp -----------------------------------CHHHHHHHHHHTCHHHHHHHTSTT------SSCCCCCTTSCCHHH
T ss_pred ccccCchhhhhhhHHHHHHHhcc--CCCccc-CchhhHHHHHHHHcCCHHHHHHHHHcC------CCCCCcCCCCCCHHH
Confidence 46899999999999999999988 788774 578999999999999999999999988 679999999999999
Q ss_pred HHHHcCCHHHHHHHHhcCCCccCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCccccCCCCC-hHHHHH--HHc
Q 004286 90 IAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAARHGHKDAFLCLHYLCASVDDGYNYSRRKNGE-TILHYA--ISG 166 (763)
Q Consensus 90 ~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~d~~G~-TpLh~A--~~~ 166 (763)
+|+..|+.+++++|+++|++ ++.+|..|+||||+|+..|+.+++++|+++|++++ .+|..|. ||||+| +..
T Consensus 76 ~A~~~g~~~~v~~Ll~~ga~-~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~-----~~~~~~~~t~l~~a~~~~~ 149 (239)
T 1ycs_B 76 NAVCAGHTEIVKFLVQFGVN-VNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVF-----AMTYSDMQTAADKCEEMEE 149 (239)
T ss_dssp HHHHHTCHHHHHHHHHHTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-----CCCSSSCCCHHHHCCSSST
T ss_pred HHHHcCCHHHHHHHHHcCCC-CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc-----eecCCCCcchHHHHHHhhh
Confidence 99999999999999999999 99999999999999999999999999999999999 7887777 999999 888
Q ss_pred CChHHHHHHHHHhcccccccc---------ccCCCcHHHHHhcCCC
Q 004286 167 YYFVDLAFQIIHLYEKLVNFV---------NERGVSPLHLLATKPN 203 (763)
Q Consensus 167 g~~~~iv~~LL~~~~~~~~~~---------d~~G~TpLh~A~~~~~ 203 (763)
|+. +++++|++. +++++.. +..|.+|++++...|.
T Consensus 150 g~~-~~~~~Ll~~-~a~~~~~~~~~~~al~d~~~~~~~eLa~~~G~ 193 (239)
T 1ycs_B 150 GYT-QCSQFLYGV-QEKMGIMNKGVIYALWDYEPQNDDELPMKEGD 193 (239)
T ss_dssp TCC-CHHHHHHHH-HHHTTTTGGGEEEESSCBCCSSTTBCCBCSSC
T ss_pred ccH-HHHHHHHHh-hhcccccccceEEEEeccCCCCCCcccccCCC
Confidence 999 999999995 8888776 5567888888887773
No 81
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.93 E-value=3.3e-26 Score=209.42 Aligned_cols=134 Identities=19% Similarity=0.128 Sum_probs=127.7
Q ss_pred CccccccCCCCChHHHHHHHcCCHHHHHHHHHHhhhhccccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCccCCC
Q 004286 35 RIHEARITRSGGTALHIAVSDGQEEIVEDLVRIIHEKQQLKVLKIGDERGSTPLHIAAGLGNVSMCKCIATADPRLIGER 114 (763)
Q Consensus 35 ~~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~ 114 (763)
+.+++..|..|+||||+|+..|+.+++++|+++| ++++.+|..|+||||+|+. |+.+++++|+++|++ ++.+
T Consensus 2 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g------~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~-~~~~ 73 (136)
T 1d9s_A 2 SPGIHMLGGSSDAGLATAAARGQVETVRQLLEAG------ADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAE-PNCA 73 (136)
T ss_dssp CCCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTT------CCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCC-SSCC
T ss_pred CCCccCCCCCCccHHHHHHHcCCHHHHHHHHHcC------CCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCC-CCCc
Confidence 5678889999999999999999999999999988 6789999999999999999 999999999999999 9999
Q ss_pred CCC-CChHHHHHHHcCCHHHHHHHHHcCCCCCCCCccccCCCCChHHHHHHHcCChHHHHHHHHHhcccc
Q 004286 115 NHE-NETPFFLAARHGHKDAFLCLHYLCASVDDGYNYSRRKNGETILHYAISGYYFVDLAFQIIHLYEKL 183 (763)
Q Consensus 115 ~~~-g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~d~~G~TpLh~A~~~g~~~~iv~~LL~~~~~~ 183 (763)
|.. |+||||+|+..|+.+++++|+++|++++ .+|..|.||||+|+..++. +++++|+++ |+|
T Consensus 74 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-----~~d~~g~tpl~~A~~~~~~-~~~~~Ll~~-Gad 136 (136)
T 1d9s_A 74 DPATLTRPVHDAAREGFLDTLVVLHRAGARLD-----VCDAWGRLPVDLAEEQGHR-DIARYLHAA-TGD 136 (136)
T ss_dssp BTTTTBCHHHHHHHHTCHHHHHHHHHTCCCCC-----CCSSSSSCHHHHHHHHTCH-HHHHHHHHH-HCC
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-----ccCCCCCCHHHHHHHcCCH-HHHHHHHHc-CCC
Confidence 999 9999999999999999999999999998 8999999999999999999 999999994 754
No 82
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.93 E-value=2.5e-26 Score=215.69 Aligned_cols=146 Identities=18% Similarity=0.131 Sum_probs=119.6
Q ss_pred cccCCCCChHHHHHHHcCCHHHHHHHHHHhhhhccccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCccCCCCCCC
Q 004286 39 ARITRSGGTALHIAVSDGQEEIVEDLVRIIHEKQQLKVLKIGDERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHEN 118 (763)
Q Consensus 39 ~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g 118 (763)
+..+..|.||||+||..|+.+++++|+++| ++++.+|..|+||||+|+ .|+.+++++|+++|++ ++.+|..|
T Consensus 6 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g------~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~-~~~~d~~g 77 (156)
T 1bi7_B 6 GSSMEPSADWLATAAARGRVEEVRALLEAG------ANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAE-PNCADPAT 77 (156)
T ss_dssp ----CCSTTHHHHHHHHTCHHHHHHHHTTT------CCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCC-CCCCCTTT
T ss_pred cCCCccchHHHHHHHHcCCHHHHHHHHHcC------CCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCC-CCCcCCCC
Confidence 345788999999999999999999999988 678999999999999996 9999999999999998 99999999
Q ss_pred Ch-HHHHHHHcCCHHHHHHHHHcCCCCCCCCccccCCCCChHHHHHHHcCChHHHHHHHHHhccccccccccCCCcHHHH
Q 004286 119 ET-PFFLAARHGHKDAFLCLHYLCASVDDGYNYSRRKNGETILHYAISGYYFVDLAFQIIHLYEKLVNFVNERGVSPLHL 197 (763)
Q Consensus 119 ~T-pLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~d~~G~TpLh~A~~~g~~~~iv~~LL~~~~~~~~~~d~~G~TpLh~ 197 (763)
.| |||+|+..|+.+++++|+++|++++ .+|..|.||||+|+..|+. +++++|++ .|++++.+|..|.||.+-
T Consensus 78 ~ttpL~~A~~~~~~~~v~~Ll~~ga~~~-----~~d~~g~tpl~~A~~~~~~-~~v~~Ll~-~ga~~~~~~~~g~t~~~~ 150 (156)
T 1bi7_B 78 LTRPVHDAAREGFLDTLVVLHRAGARLD-----VRDAWGRLPVDLAEELGHR-DVARYLRA-AAGGTRGSNHARIDAAEG 150 (156)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHHTCCSS-----CCCTTCCCHHHHHHHHTCH-HHHHHHSS-CC----------------
T ss_pred CcHHHHHHHHCCCHHHHHHHHHcCCCCc-----ccCCCCCCHHHHHHHhCHH-HHHHHHHH-cCCCCCccCcCcCccccc
Confidence 99 9999999999999999999999999 8999999999999999999 99999999 599999999999999885
Q ss_pred Hh
Q 004286 198 LA 199 (763)
Q Consensus 198 A~ 199 (763)
+.
T Consensus 151 ~~ 152 (156)
T 1bi7_B 151 PS 152 (156)
T ss_dssp --
T ss_pred CC
Confidence 43
No 83
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.93 E-value=9.3e-27 Score=224.70 Aligned_cols=142 Identities=14% Similarity=0.051 Sum_probs=68.4
Q ss_pred ChHHHHHHHcCCHHHHHHHHHHhhhhccccccccCC-CCCchHHHHHHHcCCH----HHHHHHHhcCCCccCCCCCCCCh
Q 004286 46 GTALHIAVSDGQEEIVEDLVRIIHEKQQLKVLKIGD-ERGSTPLHIAAGLGNV----SMCKCIATADPRLIGERNHENET 120 (763)
Q Consensus 46 ~TpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~d-~~g~TpLh~Aa~~g~~----~~v~~Ll~~~~~~~~~~~~~g~T 120 (763)
.++||.|++.|+.+.++.+++.+ ++.++ ..|+||||+|+..|+. +++++|+++|++ +|.+|..|+|
T Consensus 7 ~~~l~~Aa~~g~~~~~~~l~~~~--------~~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gad-vn~~d~~g~T 77 (186)
T 3t8k_A 7 YRTVSAAAMLGTYEDFLELFEKG--------YEDKESVLKSNILYDVLRNNNDEARYKISMFLINKGAD-IKSRTKEGTT 77 (186)
T ss_dssp CSSHHHHHHHSCHHHHHHHHHHS--------SSCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCC-SSCCCTTCCC
T ss_pred ccHHHHHHHcCCHHHHHHHHhcC--------cccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCC-CCCCCCCCCc
Confidence 34455555555555554444432 22222 3455555555554442 245555555554 4555555555
Q ss_pred HHHHHHHcCC------HHHHHHHHHcCCCCCCCCccccCCCCC-hHHHHHHHcCC-----hHHHHHHHHHhccccccccc
Q 004286 121 PFFLAARHGH------KDAFLCLHYLCASVDDGYNYSRRKNGE-TILHYAISGYY-----FVDLAFQIIHLYEKLVNFVN 188 (763)
Q Consensus 121 pLh~A~~~g~------~~~v~~Ll~~ga~~~~~~~~~~d~~G~-TpLh~A~~~g~-----~~~iv~~LL~~~~~~~~~~d 188 (763)
|||+|+..|+ .+++++|+++|++++ .+|..|+ ||||+|+..+. . +++++|++..|++++.+|
T Consensus 78 pLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin-----~~d~~g~ttpLh~A~~~~~~~~~~~-~iv~~Ll~~~gad~~~~d 151 (186)
T 3t8k_A 78 LFFPLFQGGGNDITGTTELCKIFLEKGADIT-----ALYKPYKIVVFKNIFNYFVDENEMI-PLYKLIFSQSGLQLLIKD 151 (186)
T ss_dssp THHHHHHHCTTCHHHHHHHHHHHHHTTCCSS-----SCBGGGTBCTTGGGGGCCSCHHHHH-HHHHHHHTSTTCCTTCCC
T ss_pred HHHHHHHcCCcchhhHHHHHHHHHHCCCCCC-----ccCCCcCchHHHHHHHcCCChhhHH-HHHHHHHHhcCCCCcccC
Confidence 5555555444 344555555555554 4555555 55555554222 2 344555542355555555
Q ss_pred cCCCcHHHHHhcCC
Q 004286 189 ERGVSPLHLLATKP 202 (763)
Q Consensus 189 ~~G~TpLh~A~~~~ 202 (763)
..|.||||+|++.+
T Consensus 152 ~~G~TpL~~A~~~~ 165 (186)
T 3t8k_A 152 KWGLTALEFVKRCQ 165 (186)
T ss_dssp TTSCCHHHHHHTTT
T ss_pred CCCCCHHHHHHHcC
Confidence 55555555555544
No 84
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.93 E-value=1.9e-26 Score=222.60 Aligned_cols=162 Identities=14% Similarity=0.054 Sum_probs=142.7
Q ss_pred hhHHHHHHHHcCCHHHHHHHHccCCCccccccC-CCCChHHHHHHHcCCH----HHHHHHHHHhhhhccccccccCCCCC
Q 004286 10 LKKGLFKSAMKGKWNEVVENYGKDDRIHEARIT-RSGGTALHIAVSDGQE----EIVEDLVRIIHEKQQLKVLKIGDERG 84 (763)
Q Consensus 10 ~~~~L~~aa~~g~~~~v~~lL~~~~~~~~~~~d-~~g~TpLh~A~~~g~~----~~v~~Ll~~g~~~~~~~~~~~~d~~g 84 (763)
..++|+.||..|+.+.++.++.. +. +..+ ..|+||||+|+..|+. +++++|+++| +++|.+|..|
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~--~~--~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~G------advn~~d~~g 75 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEK--GY--EDKESVLKSNILYDVLRNNNDEARYKISMFLINKG------ADIKSRTKEG 75 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHH--SS--SCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTT------CCSSCCCTTC
T ss_pred cccHHHHHHHcCCHHHHHHHHhc--Cc--ccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCC------CCCCCCCCCC
Confidence 45689999999999999999877 32 3344 7899999999999985 5999999998 7899999999
Q ss_pred chHHHHHHHcCC------HHHHHHHHhcCCCccCCCCCCCC-hHHHHHHHcC-----CHHHHHHHHH-cCCCCCCCCccc
Q 004286 85 STPLHIAAGLGN------VSMCKCIATADPRLIGERNHENE-TPFFLAARHG-----HKDAFLCLHY-LCASVDDGYNYS 151 (763)
Q Consensus 85 ~TpLh~Aa~~g~------~~~v~~Ll~~~~~~~~~~~~~g~-TpLh~A~~~g-----~~~~v~~Ll~-~ga~~~~~~~~~ 151 (763)
+||||+|+..|+ .+++++|+++|++ +|.+|..|. ||||+|+..+ +.+++++|++ +|++++ .
T Consensus 76 ~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gad-in~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~-----~ 149 (186)
T 3t8k_A 76 TTLFFPLFQGGGNDITGTTELCKIFLEKGAD-ITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLL-----I 149 (186)
T ss_dssp CCTHHHHHHHCTTCHHHHHHHHHHHHHTTCC-SSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTT-----C
T ss_pred CcHHHHHHHcCCcchhhHHHHHHHHHHCCCC-CCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCc-----c
Confidence 999999999997 6889999999999 999999999 9999999954 4569999999 999999 9
Q ss_pred cCCCCChHHHHHHHcCChHHHHHHHHHhcccccccccc
Q 004286 152 RRKNGETILHYAISGYYFVDLAFQIIHLYEKLVNFVNE 189 (763)
Q Consensus 152 ~d~~G~TpLh~A~~~g~~~~iv~~LL~~~~~~~~~~d~ 189 (763)
+|..|.||||+|++.|+. +++++|++ +..+.+.+++
T Consensus 150 ~d~~G~TpL~~A~~~~~~-~~v~~L~~-~~~~~~~~~~ 185 (186)
T 3t8k_A 150 KDKWGLTALEFVKRCQKP-IALKMMED-YIKKYNLKEN 185 (186)
T ss_dssp CCTTSCCHHHHHHTTTCH-HHHHHHHH-HHHHHTCCC-
T ss_pred cCCCCCCHHHHHHHcCCH-HHHHHHHH-HHHHHhcccC
Confidence 999999999999999999 99999998 4556665543
No 85
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.93 E-value=9.4e-26 Score=206.38 Aligned_cols=133 Identities=13% Similarity=0.070 Sum_probs=127.8
Q ss_pred cccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCccCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCccccCC
Q 004286 75 KVLKIGDERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAARHGHKDAFLCLHYLCASVDDGYNYSRRK 154 (763)
Q Consensus 75 ~~~~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~d~ 154 (763)
++++.+|..|.||||+|+..|+.+++++|+++|++ ++.+|..|+||||+|+. |+.+++++|+++|++++ .+|.
T Consensus 3 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~-----~~~~ 75 (136)
T 1d9s_A 3 PGIHMLGGSSDAGLATAAARGQVETVRQLLEAGAD-PNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPN-----CADP 75 (136)
T ss_dssp CCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSS-----CCBT
T ss_pred CCccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCC-cCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCC-----CcCC
Confidence 67899999999999999999999999999999998 99999999999999999 99999999999999998 8999
Q ss_pred C-CChHHHHHHHcCChHHHHHHHHHhccccccccccCCCcHHHHHhcCCCCccCCchHHHHHHHHHcCCC
Q 004286 155 N-GETILHYAISGYYFVDLAFQIIHLYEKLVNFVNERGVSPLHLLATKPNAFRSGSHLGLCTGIIYHCIS 223 (763)
Q Consensus 155 ~-G~TpLh~A~~~g~~~~iv~~LL~~~~~~~~~~d~~G~TpLh~A~~~~~~~~~~~~~~iv~~Ll~~ga~ 223 (763)
. |.||||+|+..|+. +++++|++ .|++++.+|..|.||||+|+..++ .+++++|+++|+|
T Consensus 76 ~~g~t~L~~A~~~~~~-~~v~~Ll~-~ga~~~~~d~~g~tpl~~A~~~~~-------~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 76 ATLTRPVHDAAREGFL-DTLVVLHR-AGARLDVCDAWGRLPVDLAEEQGH-------RDIARYLHAATGD 136 (136)
T ss_dssp TTTBCHHHHHHHHTCH-HHHHHHHH-TCCCCCCCSSSSSCHHHHHHHHTC-------HHHHHHHHHHHCC
T ss_pred CCCCCHHHHHHHcCCH-HHHHHHHH-cCCCCCccCCCCCCHHHHHHHcCC-------HHHHHHHHHcCCC
Confidence 9 99999999999999 99999999 599999999999999999999985 7999999999986
No 86
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.91 E-value=3.4e-24 Score=195.99 Aligned_cols=126 Identities=26% Similarity=0.252 Sum_probs=119.0
Q ss_pred cCCCCChHHHHHHHcCCHHHHHHHHHHhhhhccccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCccCCCCCCCCh
Q 004286 41 ITRSGGTALHIAVSDGQEEIVEDLVRIIHEKQQLKVLKIGDERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENET 120 (763)
Q Consensus 41 ~d~~g~TpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~T 120 (763)
....|.||||+||..|+.+++++|+++| ++++.+|..|+||||+|+..|+.+++++|+++|++ ++.+|..|.|
T Consensus 10 ~~~~~~t~l~~A~~~g~~~~v~~Ll~~g------~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~d~~g~t 82 (136)
T 2jab_A 10 HGSDLGKKLLEAARAGQDDEVRILMANG------ADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGAD-VNAVDAIGFT 82 (136)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHHHTT------CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTCCC
T ss_pred ccccccHHHHHHHHhCCHHHHHHHHHcC------CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCcCCCCCCC
Confidence 4567899999999999999999999988 67899999999999999999999999999999998 9999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCCCccccCCCCChHHHHHHHcCChHHHHHHHHHh
Q 004286 121 PFFLAARHGHKDAFLCLHYLCASVDDGYNYSRRKNGETILHYAISGYYFVDLAFQIIHL 179 (763)
Q Consensus 121 pLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~d~~G~TpLh~A~~~g~~~~iv~~LL~~ 179 (763)
|||+|+..|+.+++++|+++|++++ .+|.+|.||||+|+..|+. +++++|++.
T Consensus 83 ~L~~A~~~~~~~~v~~Ll~~g~~~~-----~~~~~g~tpl~~A~~~~~~-~~~~~Ll~~ 135 (136)
T 2jab_A 83 PLHLAAFIGHLEIAEVLLKHGADVN-----AQDKFGKTAFDISIGNGNE-DLAEILQKL 135 (136)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCTT-----CCCTTSCCHHHHHHHTTCH-HHHHHHHHC
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCc-----CcCCCCCCHHHHHHHCCCH-HHHHHHHHc
Confidence 9999999999999999999999998 8999999999999999999 999999983
No 87
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.91 E-value=1.1e-23 Score=189.34 Aligned_cols=126 Identities=30% Similarity=0.453 Sum_probs=120.3
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHHhhhhccccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCccCCCCCCCChHHH
Q 004286 44 SGGTALHIAVSDGQEEIVEDLVRIIHEKQQLKVLKIGDERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETPFF 123 (763)
Q Consensus 44 ~g~TpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~TpLh 123 (763)
+|+||||+|+..|+.+++++|+++| .+++.+|..|.||||+|+..|+.+++++|+++|++ ++.+|..|.||||
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~------~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~l~ 73 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAG------ADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD-VNAKDKNGRTPLH 73 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHT------CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHH
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcC------CCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCC-CcccCCCCCcHHH
Confidence 5899999999999999999999998 66888999999999999999999999999999998 8999999999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCCCCccccCCCCChHHHHHHHcCChHHHHHHHHHhcccc
Q 004286 124 LAARHGHKDAFLCLHYLCASVDDGYNYSRRKNGETILHYAISGYYFVDLAFQIIHLYEKL 183 (763)
Q Consensus 124 ~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~d~~G~TpLh~A~~~g~~~~iv~~LL~~~~~~ 183 (763)
+|+..|+.+++++|+++|++++ .+|..|.||||+|+..|+. +++++|+++ |+|
T Consensus 74 ~A~~~~~~~~~~~Ll~~g~~~~-----~~~~~g~t~l~~A~~~~~~-~~~~~Ll~~-Gad 126 (126)
T 1n0r_A 74 LAARNGHLEVVKLLLEAGADVN-----AKDKNGRTPLHLAARNGHL-EVVKLLLEA-GAY 126 (126)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTT-----CCCTTSCCHHHHHHHTTCH-HHHHHHHHH-TCC
T ss_pred HHHHcChHHHHHHHHHcCCCCc-----ccCCCCCCHHHHHHHcCcH-HHHHHHHHc-CCC
Confidence 9999999999999999999998 8999999999999999999 999999995 764
No 88
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.90 E-value=2.8e-23 Score=186.72 Aligned_cols=126 Identities=29% Similarity=0.416 Sum_probs=121.1
Q ss_pred CCchHHHHHHHcCCHHHHHHHHhcCCCccCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCccccCCCCChHHHH
Q 004286 83 RGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAARHGHKDAFLCLHYLCASVDDGYNYSRRKNGETILHY 162 (763)
Q Consensus 83 ~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~d~~G~TpLh~ 162 (763)
+|+||||+|+..|+.++++.|++++++ ++.+|..|.||||+|+..|+.+++++|+++|++++ .+|..|.||||+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-----~~~~~g~t~l~~ 74 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGAD-VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVN-----AKDKNGRTPLHL 74 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT-----CCCTTSCCHHHH
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCC-CCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCc-----ccCCCCCcHHHH
Confidence 589999999999999999999999998 89999999999999999999999999999999998 899999999999
Q ss_pred HHHcCChHHHHHHHHHhccccccccccCCCcHHHHHhcCCCCccCCchHHHHHHHHHcCCC
Q 004286 163 AISGYYFVDLAFQIIHLYEKLVNFVNERGVSPLHLLATKPNAFRSGSHLGLCTGIIYHCIS 223 (763)
Q Consensus 163 A~~~g~~~~iv~~LL~~~~~~~~~~d~~G~TpLh~A~~~~~~~~~~~~~~iv~~Ll~~ga~ 223 (763)
|+..|+. +++++|++ .|++++.+|..|.||||+|+..++ .+++++|+++|+|
T Consensus 75 A~~~~~~-~~~~~Ll~-~g~~~~~~~~~g~t~l~~A~~~~~-------~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 75 AARNGHL-EVVKLLLE-AGADVNAKDKNGRTPLHLAARNGH-------LEVVKLLLEAGAY 126 (126)
T ss_dssp HHHTTCH-HHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTC-------HHHHHHHHHHTCC
T ss_pred HHHcChH-HHHHHHHH-cCCCCcccCCCCCCHHHHHHHcCc-------HHHHHHHHHcCCC
Confidence 9999999 99999999 499999999999999999999985 7999999999986
No 89
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.90 E-value=1.7e-23 Score=191.23 Aligned_cols=127 Identities=20% Similarity=0.149 Sum_probs=119.3
Q ss_pred CCCCCchHHHHHHHcCCHHHHHHHHhcCCCccCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCccccCCCCChH
Q 004286 80 GDERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAARHGHKDAFLCLHYLCASVDDGYNYSRRKNGETI 159 (763)
Q Consensus 80 ~d~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~d~~G~Tp 159 (763)
....|.||||+|+..|+.+++++|+++|++ ++.+|..|+||||+|+..|+.+++++|+++|++++ .+|..|.||
T Consensus 10 ~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-----~~d~~g~t~ 83 (136)
T 2jab_A 10 HGSDLGKKLLEAARAGQDDEVRILMANGAD-VNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVN-----AVDAIGFTP 83 (136)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT-----CCCTTCCCH
T ss_pred ccccccHHHHHHHHhCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-----cCCCCCCCH
Confidence 456689999999999999999999999998 89999999999999999999999999999999998 899999999
Q ss_pred HHHHHHcCChHHHHHHHHHhccccccccccCCCcHHHHHhcCCCCccCCchHHHHHHHHHcC
Q 004286 160 LHYAISGYYFVDLAFQIIHLYEKLVNFVNERGVSPLHLLATKPNAFRSGSHLGLCTGIIYHC 221 (763)
Q Consensus 160 Lh~A~~~g~~~~iv~~LL~~~~~~~~~~d~~G~TpLh~A~~~~~~~~~~~~~~iv~~Ll~~g 221 (763)
||+|+..|+. +++++|++ .|++++.+|.+|.||||+|+..++ .+++++|+++|
T Consensus 84 L~~A~~~~~~-~~v~~Ll~-~g~~~~~~~~~g~tpl~~A~~~~~-------~~~~~~Ll~~G 136 (136)
T 2jab_A 84 LHLAAFIGHL-EIAEVLLK-HGADVNAQDKFGKTAFDISIGNGN-------EDLAEILQKLN 136 (136)
T ss_dssp HHHHHHHTCH-HHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTC-------HHHHHHHHHC-
T ss_pred HHHHHHcCCH-HHHHHHHH-cCCCCcCcCCCCCCHHHHHHHCCC-------HHHHHHHHHcC
Confidence 9999999999 99999999 599999999999999999999985 69999999876
No 90
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.90 E-value=3.2e-24 Score=201.19 Aligned_cols=142 Identities=18% Similarity=0.162 Sum_probs=118.4
Q ss_pred hhhhhHHHHHHHHcCCHHHHHHHHccCCCccccccCCCCChHHHHHHHcCCHHHHHHHHHHhhhhccccccccCCCCCch
Q 004286 7 IDQLKKGLFKSAMKGKWNEVVENYGKDDRIHEARITRSGGTALHIAVSDGQEEIVEDLVRIIHEKQQLKVLKIGDERGST 86 (763)
Q Consensus 7 ~~~~~~~L~~aa~~g~~~~v~~lL~~~~~~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~d~~g~T 86 (763)
.+...++||.|+..|+.+.++.++.. +++++..|..|+||||+|+ .|+.+++++|+++| ++++.+|..|+|
T Consensus 9 ~~~~~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g------~~~~~~d~~g~t 79 (156)
T 1bi7_B 9 MEPSADWLATAAARGRVEEVRALLEA--GANPNAPNSYGRRPIQVMM-MGSARVAELLLLHG------AEPNCADPATLT 79 (156)
T ss_dssp -CCSTTHHHHHHHHTCHHHHHHHHTT--TCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTT------CCCCCCCTTTCC
T ss_pred CccchHHHHHHHHcCCHHHHHHHHHc--CCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcC------CCCCCcCCCCCc
Confidence 34568899999999999999999987 8899999999999999996 99999999999988 779999999999
Q ss_pred -HHHHHHHcCCHHHHHHHHhcCCCccCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCccccCCCCChHHHHH
Q 004286 87 -PLHIAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAARHGHKDAFLCLHYLCASVDDGYNYSRRKNGETILHYA 163 (763)
Q Consensus 87 -pLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~d~~G~TpLh~A 163 (763)
|||+|+..|+.+++++|+++|++ ++.+|..|+||||+|+..|+.+++++|+++|++++ .+|..|.||.+.+
T Consensus 80 tpL~~A~~~~~~~~v~~Ll~~ga~-~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~-----~~~~~g~t~~~~~ 151 (156)
T 1bi7_B 80 RPVHDAAREGFLDTLVVLHRAGAR-LDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTR-----GSNHARIDAAEGP 151 (156)
T ss_dssp CHHHHHHHHTCHHHHHHHHHHTCC-SSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC----------------------
T ss_pred HHHHHHHHCCCHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCC-----ccCcCcCcccccC
Confidence 99999999999999999999999 99999999999999999999999999999999999 8999999998754
No 91
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.90 E-value=3.1e-24 Score=196.46 Aligned_cols=131 Identities=24% Similarity=0.242 Sum_probs=115.0
Q ss_pred CccccccCCCCChHHHHHHHcCCHHHHHHHHHHhhhhccccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCccCCC
Q 004286 35 RIHEARITRSGGTALHIAVSDGQEEIVEDLVRIIHEKQQLKVLKIGDERGSTPLHIAAGLGNVSMCKCIATADPRLIGER 114 (763)
Q Consensus 35 ~~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~ 114 (763)
|+++ .+|..|+||||+|+..|+.+++++|++.| ++++.+|..|+||||+|+..|+.+++++|+++|++ ++.+
T Consensus 1 G~d~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g------~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~ 72 (137)
T 3c5r_A 1 GIDP-FTNHRGETLLHIASIKGDIPSVEYLLQNG------SDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKAL-VNTT 72 (137)
T ss_dssp ---C-CCCTTCCCHHHHHHHHTCHHHHHHHHHTT------CCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCC
T ss_pred CCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcC------CCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCc-ccCc
Confidence 3455 56889999999999999999999999987 67888999999999999999999999999999998 8999
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCccccCCCCChHHHHHHHcCChHHHHHHHHHh
Q 004286 115 NHENETPFFLAARHGHKDAFLCLHYLCASVDDGYNYSRRKNGETILHYAISGYYFVDLAFQIIHL 179 (763)
Q Consensus 115 ~~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~d~~G~TpLh~A~~~g~~~~iv~~LL~~ 179 (763)
|..|.||||+|+..|+.+++++|+++|++++ .+|..|.||||+|+..+.. +++++|.+.
T Consensus 73 ~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-----~~~~~g~tpl~~A~~~~~~-~~l~~l~~~ 131 (137)
T 3c5r_A 73 GYQNDSPLHDAAKNGHVDIVKLLLSYGASRN-----AVNIFGLRPVDYTDDESMK-SLLLLPEKN 131 (137)
T ss_dssp CGGGCCHHHHHHHTTCHHHHHHHHHTTCCTT-----CCCTTSCCGGGGCCCHHHH-HHHSCC---
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-----CCCCCCCCHHHHHhhccHH-HHHhhcccc
Confidence 9999999999999999999999999999998 8999999999999988888 888777653
No 92
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.89 E-value=1.6e-23 Score=191.78 Aligned_cols=131 Identities=22% Similarity=0.207 Sum_probs=117.7
Q ss_pred cccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCccCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCccccCC
Q 004286 75 KVLKIGDERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAARHGHKDAFLCLHYLCASVDDGYNYSRRK 154 (763)
Q Consensus 75 ~~~~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~d~ 154 (763)
.|+ .+|..|+||||+|+..|+.+++++|+++|++ ++.+|..|+||||+|+..|+.+++++|+++|++++ .+|.
T Consensus 2 ~d~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-----~~~~ 74 (137)
T 3c5r_A 2 IDP-FTNHRGETLLHIASIKGDIPSVEYLLQNGSD-PNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVN-----TTGY 74 (137)
T ss_dssp --C-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-SCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-----CCCG
T ss_pred CCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCccc-----CcCC
Confidence 345 6899999999999999999999999999998 99999999999999999999999999999999998 8999
Q ss_pred CCChHHHHHHHcCChHHHHHHHHHhccccccccccCCCcHHHHHhcCCCCccCCchHHHHHHHHHcC
Q 004286 155 NGETILHYAISGYYFVDLAFQIIHLYEKLVNFVNERGVSPLHLLATKPNAFRSGSHLGLCTGIIYHC 221 (763)
Q Consensus 155 ~G~TpLh~A~~~g~~~~iv~~LL~~~~~~~~~~d~~G~TpLh~A~~~~~~~~~~~~~~iv~~Ll~~g 221 (763)
.|.||||+|+..|+. +++++|++ .|++++.+|.+|.||||+|+..+ ..+++++|.+.+
T Consensus 75 ~g~t~L~~A~~~~~~-~~v~~Ll~-~ga~~~~~~~~g~tpl~~A~~~~-------~~~~l~~l~~~~ 132 (137)
T 3c5r_A 75 QNDSPLHDAAKNGHV-DIVKLLLS-YGASRNAVNIFGLRPVDYTDDES-------MKSLLLLPEKNE 132 (137)
T ss_dssp GGCCHHHHHHHTTCH-HHHHHHHH-TTCCTTCCCTTSCCGGGGCCCHH-------HHHHHSCC----
T ss_pred CCCCHHHHHHHcCCH-HHHHHHHH-cCCCCCCCCCCCCCHHHHHhhcc-------HHHHHhhccccc
Confidence 999999999999999 99999999 59999999999999999999876 357776665544
No 93
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.89 E-value=2.6e-23 Score=200.62 Aligned_cols=141 Identities=19% Similarity=0.168 Sum_probs=128.4
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHHhhhhccccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCccCCCC-CCCCh
Q 004286 42 TRSGGTALHIAVSDGQEEIVEDLVRIIHEKQQLKVLKIGDERGSTPLHIAAGLGNVSMCKCIATADPRLIGERN-HENET 120 (763)
Q Consensus 42 d~~g~TpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~-~~g~T 120 (763)
+..|+||||+||..|+.++++.|++ | .+++.+|..|+||||+|+..|+.+++++|+++|++ ++.++ ..|+|
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~------~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~~g~t 112 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-D------RDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGAD-LDHRDMRGGLT 112 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-T------SCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCSSSSCC
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-c------CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCcCCCCCCCC
Confidence 5689999999999999999999999 6 67899999999999999999999999999999998 88888 89999
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCCCccccCCCCChHHHHHHHcCChHHHHHHHHHhccccccccccCCCcHHHHHhc
Q 004286 121 PFFLAARHGHKDAFLCLHYLCASVDDGYNYSRRKNGETILHYAISGYYFVDLAFQIIHLYEKLVNFVNERGVSPLHLLAT 200 (763)
Q Consensus 121 pLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~d~~G~TpLh~A~~~g~~~~iv~~LL~~~~~~~~~~d~~G~TpLh~A~~ 200 (763)
|||+|+..|+.+++++|+++|++++ .+|.+|.||||+|+..++. ..+.+||++|+.
T Consensus 113 pL~~A~~~~~~~~v~~Ll~~ga~~~-----~~d~~g~tpl~~A~~~~~~-------------------~~~~~~l~~a~~ 168 (183)
T 3deo_A 113 ALHMAAGYVRPEVVEALVELGADIE-----VEDERGLTALELAREILKT-------------------TPKGNPMQFGRR 168 (183)
T ss_dssp HHHHHHHTTCHHHHHHHHHHTCCTT-----CCCTTSCCHHHHHHHHHHT-------------------CCCCSHHHHHHH
T ss_pred HHHHHHhcCcHHHHHHHHHcCCCCc-----CCCCCCCCHHHHHHHhccC-------------------cccccHHHHHHH
Confidence 9999999999999999999999998 8999999999999875543 346899999999
Q ss_pred CCCCccCCchHHHHHHHHHcC
Q 004286 201 KPNAFRSGSHLGLCTGIIYHC 221 (763)
Q Consensus 201 ~~~~~~~~~~~~iv~~Ll~~g 221 (763)
.| +.+++++|.++.
T Consensus 169 ~~-------~~~i~~~L~~~~ 182 (183)
T 3deo_A 169 IG-------LEKVINVLEGQV 182 (183)
T ss_dssp HH-------HHHHHHHHHTCC
T ss_pred cC-------HHHHHHHHHHhh
Confidence 87 469999997653
No 94
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.89 E-value=1.8e-23 Score=211.65 Aligned_cols=145 Identities=19% Similarity=0.169 Sum_probs=131.5
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHHhhhhccccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCccCCCC-CCCCh
Q 004286 42 TRSGGTALHIAVSDGQEEIVEDLVRIIHEKQQLKVLKIGDERGSTPLHIAAGLGNVSMCKCIATADPRLIGERN-HENET 120 (763)
Q Consensus 42 d~~g~TpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~-~~g~T 120 (763)
+..|+||||+||..|+.++++.|++ | ++++.+|..|+||||+|+..|+.++|++|+++|++ ++.++ ..|+|
T Consensus 42 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~------~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~~g~t 113 (244)
T 3ui2_A 42 VSEYETPWWTAARKADEQALSQLLE-D------RDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGAD-LDHRDMRGGLT 113 (244)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHTTT-T------CCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCC-TTCCCSSSCCC
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHHc-C------CCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCC-CCcCCCCCCCC
Confidence 4579999999999999999999999 6 67899999999999999999999999999999999 88888 78999
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCCCccccCCCCChHHHHHHHcCChHHHHHHHHHhccccccccccCCCcHHHHHhc
Q 004286 121 PFFLAARHGHKDAFLCLHYLCASVDDGYNYSRRKNGETILHYAISGYYFVDLAFQIIHLYEKLVNFVNERGVSPLHLLAT 200 (763)
Q Consensus 121 pLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~d~~G~TpLh~A~~~g~~~~iv~~LL~~~~~~~~~~d~~G~TpLh~A~~ 200 (763)
|||+|+..|+.+++++|+++|++++ .+|..|.||||+|+..++ +..+.||||+|+.
T Consensus 114 ~L~~A~~~g~~~~v~~Ll~~ga~~~-----~~d~~g~t~l~~A~~~~~-------------------~~~~~~~l~~a~~ 169 (244)
T 3ui2_A 114 ALHMAAGYVRPEVVEALVELGADIE-----VEDERGLTALELAREILK-------------------TTPKGNPMQFGRR 169 (244)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTT-----CCCTTCCCHHHHHHHHHT-------------------TCCCSSHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCC-----CCCCCCCcHHHHHHHHHh-------------------ccCCCCHHHHHHH
Confidence 9999999999999999999999998 899999999999986433 2468999999999
Q ss_pred CCCCccCCchHHHHHHHHHcCCCCC
Q 004286 201 KPNAFRSGSHLGLCTGIIYHCISVD 225 (763)
Q Consensus 201 ~~~~~~~~~~~~iv~~Ll~~ga~~~ 225 (763)
.| +.+++++|++++.+..
T Consensus 170 ~g-------~~~iv~~L~~~~~~~~ 187 (244)
T 3ui2_A 170 IG-------LEKVINVLEGQVFEYA 187 (244)
T ss_dssp HH-------HHHHHHHHHHHHEEEE
T ss_pred cC-------hHHHHHHHHHhccccc
Confidence 88 5799999999766543
No 95
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.88 E-value=2.1e-22 Score=210.01 Aligned_cols=139 Identities=16% Similarity=0.067 Sum_probs=122.8
Q ss_pred CChHHHHHHHcCCHHHHHHHHHHhhhhcccccccc------CCCCCchHHHHHHHc---CCHHHHHHHHhcCCCccCCCC
Q 004286 45 GGTALHIAVSDGQEEIVEDLVRIIHEKQQLKVLKI------GDERGSTPLHIAAGL---GNVSMCKCIATADPRLIGERN 115 (763)
Q Consensus 45 g~TpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~------~d~~g~TpLh~Aa~~---g~~~~v~~Ll~~~~~~~~~~~ 115 (763)
+.++||.|+..|+.+.++.|++.| ++++. .|..|+||||+|+.. |+.+++++|+++|++ ++.+|
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll~~g------~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gad-vn~~d 223 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAFANG------QDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGH-LDAKA 223 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTT------CCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSC-TTCCC
T ss_pred hHHHHhhhhhccCHHHHHHHHhcC------CcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCC-CCCCC
Confidence 457799999999999999999988 44555 689999999999997 899999999999998 99999
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCccccCCCCChHHHHHHHcCChHHHHHHHHHhccccccccccCCCcHH
Q 004286 116 HENETPFFLAARHGHKDAFLCLHYLCASVDDGYNYSRRKNGETILHYAISGYYFVDLAFQIIHLYEKLVNFVNERGVSPL 195 (763)
Q Consensus 116 ~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~d~~G~TpLh~A~~~g~~~~iv~~LL~~~~~~~~~~d~~G~TpL 195 (763)
..|+||||+|+..|+.+++++|+++|++++ .+|.+|.||||+|+..|+. +++++|++. +++ .|.|||
T Consensus 224 ~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~-----~~d~~G~TpL~~A~~~~~~-~iv~~Ll~~-ga~------~g~tpL 290 (301)
T 2b0o_E 224 ADGNTALHYAALYNQPDCLKLLLKGRALVG-----TVNEAGETALDIARKKHHK-ECEELLEQA-QAG------TFAFPL 290 (301)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTTCCCS-----CCCTTSCCHHHHHHHHTCH-HHHHHHHHH-HHH------TTSSCC
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-----CcCCCCCCHHHHHHHcCCH-HHHHHHHHh-cCC------CCCChh
Confidence 999999999999999999999999999999 8999999999999999999 999999995 654 689999
Q ss_pred HHHhcCCC
Q 004286 196 HLLATKPN 203 (763)
Q Consensus 196 h~A~~~~~ 203 (763)
|+|+..|.
T Consensus 291 h~A~~~g~ 298 (301)
T 2b0o_E 291 HVDYSWVI 298 (301)
T ss_dssp C-------
T ss_pred HHHHhcCC
Confidence 99999874
No 96
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.88 E-value=6e-23 Score=184.06 Aligned_cols=112 Identities=21% Similarity=0.223 Sum_probs=87.6
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHHhhhhccccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCccCCCCCCCChH
Q 004286 42 TRSGGTALHIAVSDGQEEIVEDLVRIIHEKQQLKVLKIGDERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETP 121 (763)
Q Consensus 42 d~~g~TpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~Tp 121 (763)
+..|.||||+|+..|+.+++++|++.| .+++.+|..|+||||+|+..|+.+++++|+++|++ ++.+|..|+||
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~------~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~d~~g~tp 76 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKG------EDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGAD-INAPDKHHITP 76 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTT------CCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCC-TTCCCTTSCCH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcC------CCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-CCcCCCCCCCH
Confidence 456778888888888888888888876 55777788888888888888888888888888877 77888888888
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCCCccccCCCCChHHHHHHH
Q 004286 122 FFLAARHGHKDAFLCLHYLCASVDDGYNYSRRKNGETILHYAIS 165 (763)
Q Consensus 122 Lh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~d~~G~TpLh~A~~ 165 (763)
||+|+..|+.+++++|+++|++++ .+|.+|.||||+|..
T Consensus 77 L~~A~~~~~~~~v~~Ll~~ga~~~-----~~~~~g~t~l~~A~~ 115 (123)
T 3aaa_C 77 LLSAVYEGHVSCVKLLLSKGADKT-----VKGPDGLTAFEATDN 115 (123)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTT-----CCCTTSCCHHHHCCC
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCC-----CcCCCCCCHHHHhCC
Confidence 888888888888888888888777 778888888888743
No 97
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.88 E-value=2.3e-23 Score=207.76 Aligned_cols=139 Identities=19% Similarity=0.128 Sum_probs=116.2
Q ss_pred ccCCCCChHHHHHHHcCCHHHHHHHHHHhhhhccccccccCCCCCchHHHHHHHcCCHHHHHHHHhc-CCCccCCCCCCC
Q 004286 40 RITRSGGTALHIAVSDGQEEIVEDLVRIIHEKQQLKVLKIGDERGSTPLHIAAGLGNVSMCKCIATA-DPRLIGERNHEN 118 (763)
Q Consensus 40 ~~d~~g~TpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~-~~~~~~~~~~~g 118 (763)
..+..|.||||+||..|+.+++++|++.| ++++.+|..|+||||+|+..|+.+++++|++. |++ ++.+|..|
T Consensus 68 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g------~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~-~~~~d~~g 140 (222)
T 3ehr_A 68 EQAESIDNPLHEAAKRGNLSWLRECLDNR------VGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIE-LNQQNKLG 140 (222)
T ss_dssp HHEEEESCHHHHHHHHTCHHHHHHHHHTT------CCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCC-CCCCCTTS
T ss_pred ccccccccccccccccCcHHHHHHHHhCC------CCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCC-ccccCCCC
Confidence 34667899999999999999999999988 67899999999999999999999999999999 777 99999999
Q ss_pred ChHHHHHHHcCCHHHHHHHHHcCCCCCCCCccccCCCCChHHHHHHHcCChHHHHHHHHHhccccccccccCCC
Q 004286 119 ETPFFLAARHGHKDAFLCLHYLCASVDDGYNYSRRKNGETILHYAISGYYFVDLAFQIIHLYEKLVNFVNERGV 192 (763)
Q Consensus 119 ~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~d~~G~TpLh~A~~~g~~~~iv~~LL~~~~~~~~~~d~~G~ 192 (763)
+||||+|+..|+.+++++|+++|++++ .+|.+|.||||+|+..++. ++++.|++ .+++.+..|.+|.
T Consensus 141 ~tpL~~A~~~~~~~~v~~Ll~~ga~~~-----~~~~~g~t~l~~A~~~~~~-~~l~~l~~-~~~~~~~~~~~~~ 207 (222)
T 3ehr_A 141 DTALHAAAWKGYADIVQLLLAKGARTD-----LRNIEKKLAFDMATNAACA-SLLKKKQG-TDAVRTLSNAEDY 207 (222)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHHTCCSC-----CCCTTSCCHHHHCCSHHHH-HHHC------------------
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCc-----cccCCCCCHHHHhcchhHH-HHHHHHhc-cchhhhccchhhh
Confidence 999999999999999999999999999 8999999999999999999 99999998 4877777666553
No 98
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.87 E-value=1.3e-22 Score=195.64 Aligned_cols=113 Identities=20% Similarity=0.222 Sum_probs=106.6
Q ss_pred CCCCchHHHHHHHcCCHHHHHHHHhcCCCccCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCccccC-CCCChH
Q 004286 81 DERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAARHGHKDAFLCLHYLCASVDDGYNYSRR-KNGETI 159 (763)
Q Consensus 81 d~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~d-~~G~Tp 159 (763)
+..|+||||+|+..|+.++++.|++ +++ ++.+|..|+||||+|+..|+.+++++|+++|++++ .+| ..|+||
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~-~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-----~~~~~~g~tp 113 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-DRD-VDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLD-----HRDMRGGLTA 113 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-TSC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT-----CCCSSSSCCH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-cCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-----cCCCCCCCCH
Confidence 5678999999999999999999999 877 99999999999999999999999999999999998 777 899999
Q ss_pred HHHHHHcCChHHHHHHHHHhccccccccccCCCcHHHHHhcCC
Q 004286 160 LHYAISGYYFVDLAFQIIHLYEKLVNFVNERGVSPLHLLATKP 202 (763)
Q Consensus 160 Lh~A~~~g~~~~iv~~LL~~~~~~~~~~d~~G~TpLh~A~~~~ 202 (763)
||+|+..|+. +++++|+++ |++++.+|.+|.||||+|++.+
T Consensus 114 L~~A~~~~~~-~~v~~Ll~~-ga~~~~~d~~g~tpl~~A~~~~ 154 (183)
T 3deo_A 114 LHMAAGYVRP-EVVEALVEL-GADIEVEDERGLTALELAREIL 154 (183)
T ss_dssp HHHHHHTTCH-HHHHHHHHH-TCCTTCCCTTSCCHHHHHHHHH
T ss_pred HHHHHhcCcH-HHHHHHHHc-CCCCcCCCCCCCCHHHHHHHhc
Confidence 9999999999 999999995 9999999999999999999754
No 99
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.87 E-value=2.4e-22 Score=203.31 Aligned_cols=141 Identities=20% Similarity=0.186 Sum_probs=114.6
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHHHhhhhccccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCccCCCCCCCChHH
Q 004286 43 RSGGTALHIAVSDGQEEIVEDLVRIIHEKQQLKVLKIGDERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETPF 122 (763)
Q Consensus 43 ~~g~TpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~TpL 122 (763)
..+.+++.+++..|+.+.+..+...+. ..+..|.||||+|+..|+.++++.|++ +++ ++.+|..|+|||
T Consensus 13 ~~~~~~~l~~~~~g~~~~~~~~~~~~~---------~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~-~~~~d~~g~t~L 81 (244)
T 3ui2_A 13 GEGAMEYLIEWKDGHSPSWVPSSYIAA---------DVVSEYETPWWTAARKADEQALSQLLE-DRD-VDAVDENGRTAL 81 (244)
T ss_dssp TTTEEEEEEEESSCCCCEEEEGGGSCH---------HHHHHHHHHHHHHHTTTCHHHHHHTTT-TCC-TTCBCTTSCBHH
T ss_pred CCCccHHHHHHHcCCCccccccccccc---------ccccCCCCHHHHHHHcCCHHHHHHHHc-CCC-CCCcCCCCCCHH
Confidence 345566666666666655544433221 123568899999999999999999998 777 899999999999
Q ss_pred HHHHHcCCHHHHHHHHHcCCCCCCCCccccC-CCCChHHHHHHHcCChHHHHHHHHHhccccccccccCCCcHHHHHhcC
Q 004286 123 FLAARHGHKDAFLCLHYLCASVDDGYNYSRR-KNGETILHYAISGYYFVDLAFQIIHLYEKLVNFVNERGVSPLHLLATK 201 (763)
Q Consensus 123 h~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~d-~~G~TpLh~A~~~g~~~~iv~~LL~~~~~~~~~~d~~G~TpLh~A~~~ 201 (763)
|+|+..|+.+++++|+++|++++ .+| ..|.||||+|+..|+. +++++|++. |++++.+|..|.||||+|+..
T Consensus 82 ~~A~~~g~~~~v~~Ll~~ga~~~-----~~~~~~g~t~L~~A~~~g~~-~~v~~Ll~~-ga~~~~~d~~g~t~l~~A~~~ 154 (244)
T 3ui2_A 82 LFVAGLGSDKCVRLLAEAGADLD-----HRDMRGGLTALHMAAGYVRP-EVVEALVEL-GADIEVEDERGLTALELAREI 154 (244)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCTT-----CCCSSSCCCHHHHHHHTTCH-HHHHHHHHT-TCCTTCCCTTCCCHHHHHHHH
T ss_pred HHHHHCCCHHHHHHHHHcCCCCC-----cCCCCCCCCHHHHHHHcCCH-HHHHHHHHC-CCCCCCCCCCCCcHHHHHHHH
Confidence 99999999999999999999888 677 7899999999999999 999999984 889999999999999998864
No 100
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.87 E-value=6.5e-22 Score=177.25 Aligned_cols=112 Identities=13% Similarity=0.071 Sum_probs=105.5
Q ss_pred CCCCchHHHHHHHcCCHHHHHHHHhcCCCccCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCccccCCCCChHH
Q 004286 81 DERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAARHGHKDAFLCLHYLCASVDDGYNYSRRKNGETIL 160 (763)
Q Consensus 81 d~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~d~~G~TpL 160 (763)
+..|.||||+|+..|+.++++.|++.+++ ++.+|..|+||||+|+..|+.+++++|+++|++++ .+|..|+|||
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-----~~d~~g~tpL 77 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGED-VNRTLEGGRKPLHYAADCGQLEILEFLLLKGADIN-----APDKHHITPL 77 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCC-TTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTT-----CCCTTSCCHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCC-cCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC-----cCCCCCCCHH
Confidence 56789999999999999999999999998 99999999999999999999999999999999998 8999999999
Q ss_pred HHHHHcCChHHHHHHHHHhccccccccccCCCcHHHHHhc
Q 004286 161 HYAISGYYFVDLAFQIIHLYEKLVNFVNERGVSPLHLLAT 200 (763)
Q Consensus 161 h~A~~~g~~~~iv~~LL~~~~~~~~~~d~~G~TpLh~A~~ 200 (763)
|+|+..|+. +++++|++. |++++.+|.+|.||||+|+.
T Consensus 78 ~~A~~~~~~-~~v~~Ll~~-ga~~~~~~~~g~t~l~~A~~ 115 (123)
T 3aaa_C 78 LSAVYEGHV-SCVKLLLSK-GADKTVKGPDGLTAFEATDN 115 (123)
T ss_dssp HHHHHHTCH-HHHHHHHHT-TCCTTCCCTTSCCHHHHCCC
T ss_pred HHHHHcCCH-HHHHHHHHc-CCCCCCcCCCCCCHHHHhCC
Confidence 999999999 999999995 99999999999999999954
No 101
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.86 E-value=4.1e-22 Score=207.78 Aligned_cols=139 Identities=20% Similarity=0.162 Sum_probs=122.9
Q ss_pred hHHHHHHHHcCCHHHHHHHHccCCCccccc------cCCCCChHHHHHHHc---CCHHHHHHHHHHhhhhccccccccCC
Q 004286 11 KKGLFKSAMKGKWNEVVENYGKDDRIHEAR------ITRSGGTALHIAVSD---GQEEIVEDLVRIIHEKQQLKVLKIGD 81 (763)
Q Consensus 11 ~~~L~~aa~~g~~~~v~~lL~~~~~~~~~~------~d~~g~TpLh~A~~~---g~~~~v~~Ll~~g~~~~~~~~~~~~d 81 (763)
.++|+.|+..|+.+.++.++.. +.+++. .+..|+||||+|+.. |+.+++++|+++| ++++.+|
T Consensus 152 ~~~L~~A~~~g~~~~v~~ll~~--g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~g------advn~~d 223 (301)
T 2b0o_E 152 PQRLWTAICNRDLLSVLEAFAN--GQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNG------GHLDAKA 223 (301)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHT--TCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHS------SCTTCCC
T ss_pred HHHHhhhhhccCHHHHHHHHhc--CCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcC------CCCCCCC
Confidence 4679999999999999999987 778777 689999999999997 8999999999998 6799999
Q ss_pred CCCchHHHHHHHcCCHHHHHHHHhcCCCccCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCccccCCCCChHHH
Q 004286 82 ERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAARHGHKDAFLCLHYLCASVDDGYNYSRRKNGETILH 161 (763)
Q Consensus 82 ~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~d~~G~TpLh 161 (763)
..|+||||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..|+.+++++|+++|++ .|.||||
T Consensus 224 ~~G~TpLh~A~~~g~~~~v~~Ll~~gad-~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~-----------~g~tpLh 291 (301)
T 2b0o_E 224 ADGNTALHYAALYNQPDCLKLLLKGRAL-VGTVNEAGETALDIARKKHHKECEELLEQAQAG-----------TFAFPLH 291 (301)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTTCC-CSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH-----------TTSSCCC
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC-----------CCCChhH
Confidence 9999999999999999999999999999 999999999999999999999999999999874 4789999
Q ss_pred HHHHcCCh
Q 004286 162 YAISGYYF 169 (763)
Q Consensus 162 ~A~~~g~~ 169 (763)
+|+..|+.
T Consensus 292 ~A~~~g~~ 299 (301)
T 2b0o_E 292 VDYSWVIS 299 (301)
T ss_dssp --------
T ss_pred HHHhcCCc
Confidence 99999874
No 102
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.86 E-value=2.2e-22 Score=200.65 Aligned_cols=138 Identities=20% Similarity=0.151 Sum_probs=116.7
Q ss_pred ccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCccCCCCCCCChHHHHHHHcCCHHHHHHHHHc-CCCCCCCCccccCCCC
Q 004286 78 KIGDERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAARHGHKDAFLCLHYL-CASVDDGYNYSRRKNG 156 (763)
Q Consensus 78 ~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~-ga~~~~~~~~~~d~~G 156 (763)
+..|..|.||||+|+..|+.++++.|++.|++ ++.+|..|+||||+||..|+.+++++|+++ |++++ .+|..|
T Consensus 67 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~-----~~d~~g 140 (222)
T 3ehr_A 67 AEQAESIDNPLHEAAKRGNLSWLRECLDNRVG-VNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELN-----QQNKLG 140 (222)
T ss_dssp HHHEEEESCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCC-----CCCTTS
T ss_pred cccccccccccccccccCcHHHHHHHHhCCCC-ccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCcc-----ccCCCC
Confidence 34567789999999999999999999999998 999999999999999999999999999999 99998 899999
Q ss_pred ChHHHHHHHcCChHHHHHHHHHhccccccccccCCCcHHHHHhcCCCCccCCchHHHHHHHHHcCCCCCccccc
Q 004286 157 ETILHYAISGYYFVDLAFQIIHLYEKLVNFVNERGVSPLHLLATKPNAFRSGSHLGLCTGIIYHCISVDKLQEE 230 (763)
Q Consensus 157 ~TpLh~A~~~g~~~~iv~~LL~~~~~~~~~~d~~G~TpLh~A~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~ 230 (763)
+||||+|+..|+. +++++|+++ |++++.+|.+|.||||+|+..+ ..++++.|++.|+..+..+.+
T Consensus 141 ~tpL~~A~~~~~~-~~v~~Ll~~-ga~~~~~~~~g~t~l~~A~~~~-------~~~~l~~l~~~~~~~~~~~~~ 205 (222)
T 3ehr_A 141 DTALHAAAWKGYA-DIVQLLLAK-GARTDLRNIEKKLAFDMATNAA-------CASLLKKKQGTDAVRTLSNAE 205 (222)
T ss_dssp CCHHHHHHHHTCH-HHHHHHHHH-TCCSCCCCTTSCCHHHHCCSHH-------HHHHHC---------------
T ss_pred CCHHHHHHHcCCH-HHHHHHHHc-CCCCccccCCCCCHHHHhcchh-------HHHHHHHHhccchhhhccchh
Confidence 9999999999999 999999995 9999999999999999999987 579999999999998876654
No 103
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.85 E-value=3.1e-21 Score=205.67 Aligned_cols=166 Identities=12% Similarity=0.067 Sum_probs=118.3
Q ss_pred CCCCChHHHHHHHc-CCHHHHHHHHHHhhhhccccccccCC--CCCchHHHHHHHcCCHHHHHHHHhcCCCccCCCCCCC
Q 004286 42 TRSGGTALHIAVSD-GQEEIVEDLVRIIHEKQQLKVLKIGD--ERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHEN 118 (763)
Q Consensus 42 d~~g~TpLh~A~~~-g~~~~v~~Ll~~g~~~~~~~~~~~~d--~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g 118 (763)
+..+.|+||.|+.. |+.++++.|+++| ++++..| ..|.||||+|+..|+.+++++|+++|++ ++.+|..|
T Consensus 196 ~~~~~t~L~~Aa~~~g~~~~v~~LL~~G------advn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gad-vn~~d~~G 268 (368)
T 3jue_A 196 SLHPGALLFRASGHPPSLPTMADALAHG------ADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGAN-VNQADSAG 268 (368)
T ss_dssp -CCHHHHHHHHTSSSCCHHHHHHHHHTT------CCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTS
T ss_pred cCCCCcHHHHHHHccCCHHHHHHHHHcC------CCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCC-CCCCCCCC
Confidence 34567899999999 9999999999998 6688888 8999999999999999999999999999 99999999
Q ss_pred ChHHHHHHHcCCHHHHHHHHHcCCCCCCCCccccCCCCChHHHHHHHcCChHHHHHHHHHhcc--ccccccccCCCcHHH
Q 004286 119 ETPFFLAARHGHKDAFLCLHYLCASVDDGYNYSRRKNGETILHYAISGYYFVDLAFQIIHLYE--KLVNFVNERGVSPLH 196 (763)
Q Consensus 119 ~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~d~~G~TpLh~A~~~g~~~~iv~~LL~~~~--~~~~~~d~~G~TpLh 196 (763)
+||||+|+..|+.+++++|+++|++++ .+|.+|.||||+|+..|+. +++++|+.... .+....+..+.|+++
T Consensus 269 ~TpLh~A~~~g~~~~v~~LL~~Gad~~-----~~d~~G~TpL~~A~~~g~~-~iv~lLl~~~~~~~~~~~~~~~~~t~l~ 342 (368)
T 3jue_A 269 RGPLHHATILGHTGLACLFLKRGADLG-----ARDSEGRDPLTIAMETANA-DIVTLLRLAKMREAEAAQGQAGDETYLD 342 (368)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCTT-----CCCTTSCCHHHHHHHTTCH-HHHHHHHHHHC-----------------
T ss_pred CCHHHHHHHcCcHHHHHHHHHCcCCCC-----CcCCCCCCHHHHHHHCCCH-HHHHHHHHcCCCcccccccCCCCCCHHH
Confidence 999999999999999999999999999 8999999999999999999 99999998522 234456677899999
Q ss_pred HHhcCCCCccCCchHHHHHHHHHcCCCCC
Q 004286 197 LLATKPNAFRSGSHLGLCTGIIYHCISVD 225 (763)
Q Consensus 197 ~A~~~~~~~~~~~~~~iv~~Ll~~ga~~~ 225 (763)
.+...... ..+-.+.|..++.+++
T Consensus 343 i~~~~~~~-----~~~~~ekl~r~~~~~~ 366 (368)
T 3jue_A 343 IFRDFSLM-----ASDDPEKLSRRSHDLH 366 (368)
T ss_dssp -----------------------------
T ss_pred HHHHHHhh-----cCCCHHHHHhcCCCcC
Confidence 88775421 1244455555555443
No 104
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.84 E-value=6e-21 Score=196.59 Aligned_cols=141 Identities=15% Similarity=0.043 Sum_probs=125.8
Q ss_pred ChHHHHHHHcCCHHHHHHHHHHhhhhccccccccCCCCCchHHHHHHHc---CCHHHHHHHHhcCCCccCCCCCCCChHH
Q 004286 46 GTALHIAVSDGQEEIVEDLVRIIHEKQQLKVLKIGDERGSTPLHIAAGL---GNVSMCKCIATADPRLIGERNHENETPF 122 (763)
Q Consensus 46 ~TpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~d~~g~TpLh~Aa~~---g~~~~v~~Ll~~~~~~~~~~~~~g~TpL 122 (763)
.++||.|+..|+.+.++.+++.|.+.+....++..|..|+||||+|+.. |+.+++++|+++|++ ++.+|..|+|||
T Consensus 131 l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~-in~~d~~g~TpL 209 (278)
T 1dcq_A 131 LHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGN-LDKQTGKGSTAL 209 (278)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSC-TTCCCTTCCCHH
T ss_pred hhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCC-ccccCCCCCCHH
Confidence 4789999999999999999999966544333777799999999999999 899999999999999 999999999999
Q ss_pred HHHHHcCCHHHHHHHHHcCCCCCCCCccccCCCCChHHHHHHHcCChHHHHHHHHHhccccccccccCCCcHHHHHhcCC
Q 004286 123 FLAARHGHKDAFLCLHYLCASVDDGYNYSRRKNGETILHYAISGYYFVDLAFQIIHLYEKLVNFVNERGVSPLHLLATKP 202 (763)
Q Consensus 123 h~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~d~~G~TpLh~A~~~g~~~~iv~~LL~~~~~~~~~~d~~G~TpLh~A~~~~ 202 (763)
|+|+..|+.+++++|+++|++++ .+|.+|.||||+|+..|+. +++++|++. |+ +.+++|.++..+
T Consensus 210 h~A~~~g~~~~v~~Ll~~gad~~-----~~d~~g~tpL~~A~~~~~~-~~v~~Ll~~-ga--------~~~~~~~~v~~~ 274 (278)
T 1dcq_A 210 HYCCLTDNAECLKLLLRGKASIE-----IANESGETPLDIAKRLKHE-HCEELLTQA-LS--------GRFNSHVHVEYE 274 (278)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTT-----CCCTTSCCHHHHHHHTTCH-HHHHHHHHH-HT--------TCCCSSCCCCCC
T ss_pred HHHHHcCCHHHHHHHHHcCCCCC-----CccCCCCCHHHHHHHcCCH-HHHHHHHHc-CC--------CCCCcceeeecc
Confidence 99999999999999999999999 8999999999999999999 999999995 54 345666555543
No 105
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.83 E-value=1.1e-20 Score=211.67 Aligned_cols=143 Identities=16% Similarity=0.041 Sum_probs=116.8
Q ss_pred CChHHHHHHHcCCHHHHHHHHHHhhhhccccccccCCCCCchHHHHHHH---cCCHHHHHHHHhcCCCccCCCCCCCChH
Q 004286 45 GGTALHIAVSDGQEEIVEDLVRIIHEKQQLKVLKIGDERGSTPLHIAAG---LGNVSMCKCIATADPRLIGERNHENETP 121 (763)
Q Consensus 45 g~TpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~d~~g~TpLh~Aa~---~g~~~~v~~Ll~~~~~~~~~~~~~g~Tp 121 (763)
..+.||.|+..|+.+.|+.|++.|++.+........|..|+||||+|+. .|+.+++++|+++|++ +|.+|..|+||
T Consensus 132 ~~~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~-vn~~d~~g~Tp 210 (497)
T 3lvq_E 132 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGH-LDAKAADGNTA 210 (497)
T ss_dssp CHHHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCC-TTCCCSSSCCH
T ss_pred cHHHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCC-CCccCCCCCcH
Confidence 4478999999999999999999994432221112238899999999976 9999999999999998 99999999999
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCCCccccCCCCChHHHHHHHcCChHHHHHHHHHhccccccccccCCCcHHHHHhcC
Q 004286 122 FFLAARHGHKDAFLCLHYLCASVDDGYNYSRRKNGETILHYAISGYYFVDLAFQIIHLYEKLVNFVNERGVSPLHLLATK 201 (763)
Q Consensus 122 Lh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~d~~G~TpLh~A~~~g~~~~iv~~LL~~~~~~~~~~d~~G~TpLh~A~~~ 201 (763)
||+|+..|+.+++++|+++|++++ .+|.+|+||||+|+..|+. +++++|++ .|++++. ||+|.+...
T Consensus 211 Lh~A~~~g~~~~v~~Ll~~ga~~~-----~~d~~g~tpl~~A~~~~~~-~~~~~Ll~-~ga~~~~------~~~h~~~~~ 277 (497)
T 3lvq_E 211 LHYAALYNQPDCLKLLLKGRALVG-----TVNEAGETALDIARKKHHK-ECEELLEQ-AQAGTFA------FPLHVDYSW 277 (497)
T ss_dssp HHHHTTTTCHHHHHHHHHTCCCCS-----CCCTTCCCHHHHHHHTTCH-HHHHHHHH-TCC-------------------
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCC-----CcCCCCCCHHHHHHHcCCH-HHHHHHHH-hCCCCCC------Ccceeeccc
Confidence 999999999999999999999999 8999999999999999999 99999999 5988876 688877654
No 106
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.83 E-value=1.5e-20 Score=159.20 Aligned_cols=91 Identities=33% Similarity=0.497 Sum_probs=60.5
Q ss_pred CChHHHHHHHcCCHHHHHHHHHHhhhhccccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCccCCCCCCCChHHHH
Q 004286 45 GGTALHIAVSDGQEEIVEDLVRIIHEKQQLKVLKIGDERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETPFFL 124 (763)
Q Consensus 45 g~TpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~TpLh~ 124 (763)
|+||||+||..|+.+++++|++.| ++++.+|..|+||||+|+..|+.+++++|+++|++ ++.+|..|+||||+
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~g------~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~d~~g~t~l~~ 74 (93)
T 1n0q_A 2 GRTPLHLAARNGHLEVVKLLLEAG------ADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD-VNAKDKNGRTPLHL 74 (93)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTT------CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHH
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcC------CCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCccCCCCCCHHHH
Confidence 566666666666666666666665 45666666666666666666666666666666666 66666666666666
Q ss_pred HHHcCCHHHHHHHHHcCC
Q 004286 125 AARHGHKDAFLCLHYLCA 142 (763)
Q Consensus 125 A~~~g~~~~v~~Ll~~ga 142 (763)
|+..|+.+++++|+++|+
T Consensus 75 A~~~~~~~~~~~Ll~~ga 92 (93)
T 1n0q_A 75 AARNGHLEVVKLLLEAGA 92 (93)
T ss_dssp HHHTTCHHHHHHHHHTTC
T ss_pred HHHcCCHHHHHHHHHcCC
Confidence 666666666666666665
No 107
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.82 E-value=4.4e-20 Score=206.82 Aligned_cols=136 Identities=21% Similarity=0.185 Sum_probs=117.4
Q ss_pred hHHHHHHHHcCCHHHHHHHHccCCCcccccc------CCCCChHHHHHHH---cCCHHHHHHHHHHhhhhccccccccCC
Q 004286 11 KKGLFKSAMKGKWNEVVENYGKDDRIHEARI------TRSGGTALHIAVS---DGQEEIVEDLVRIIHEKQQLKVLKIGD 81 (763)
Q Consensus 11 ~~~L~~aa~~g~~~~v~~lL~~~~~~~~~~~------d~~g~TpLh~A~~---~g~~~~v~~Ll~~g~~~~~~~~~~~~d 81 (763)
.+.||.|+..|+.+.++.+|.. +++++.. |..|+||||+||. .|+.++|++|+++| +++|.+|
T Consensus 133 ~~~L~~A~~~g~~~~v~~ll~~--g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~g------a~vn~~d 204 (497)
T 3lvq_E 133 PQRLWTAICNRDLLSVLEAFAN--GQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNG------GHLDAKA 204 (497)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHT--TCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHS------CCTTCCC
T ss_pred HHHHHHHHhccCHHHHHHHHhh--cccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcC------CCCCccC
Confidence 4679999999999999999998 7888776 8899999999977 89999999999998 7799999
Q ss_pred CCCchHHHHHHHcCCHHHHHHHHhcCCCccCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCccccCCCCChHHH
Q 004286 82 ERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAARHGHKDAFLCLHYLCASVDDGYNYSRRKNGETILH 161 (763)
Q Consensus 82 ~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~d~~G~TpLh 161 (763)
..|+||||+|+..|+.++|++|+++|++ ++.+|..|+||||+|+..|+.+++++|+++|++++ . ||+|
T Consensus 205 ~~g~TpLh~A~~~g~~~~v~~Ll~~ga~-~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~-----~------~~~h 272 (497)
T 3lvq_E 205 ADGNTALHYAALYNQPDCLKLLLKGRAL-VGTVNEAGETALDIARKKHHKECEELLEQAQAGTF-----A------FPLH 272 (497)
T ss_dssp SSSCCHHHHHTTTTCHHHHHHHHHTCCC-CSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC-------------------
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCC-----C------Ccce
Confidence 9999999999999999999999999999 99999999999999999999999999999999987 3 6888
Q ss_pred HHHHc
Q 004286 162 YAISG 166 (763)
Q Consensus 162 ~A~~~ 166 (763)
.+...
T Consensus 273 ~~~~~ 277 (497)
T 3lvq_E 273 VDYSW 277 (497)
T ss_dssp -----
T ss_pred eeccc
Confidence 77654
No 108
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.82 E-value=7.8e-20 Score=154.70 Aligned_cols=93 Identities=30% Similarity=0.459 Sum_probs=87.6
Q ss_pred CCchHHHHHHHcCCHHHHHHHHhcCCCccCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCccccCCCCChHHHH
Q 004286 83 RGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAARHGHKDAFLCLHYLCASVDDGYNYSRRKNGETILHY 162 (763)
Q Consensus 83 ~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~d~~G~TpLh~ 162 (763)
+|+||||+|+..|+.+++++|+++|++ ++.+|..|+||||+|+..|+.+++++|+++|++++ .+|.+|+||||+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-----~~d~~g~t~l~~ 74 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGAD-VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVN-----AKDKNGRTPLHL 74 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-----CCCTTSCCHHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-----ccCCCCCCHHHH
Confidence 489999999999999999999999998 99999999999999999999999999999999999 899999999999
Q ss_pred HHHcCChHHHHHHHHHhcccc
Q 004286 163 AISGYYFVDLAFQIIHLYEKL 183 (763)
Q Consensus 163 A~~~g~~~~iv~~LL~~~~~~ 183 (763)
|+..|+. +++++|++. |++
T Consensus 75 A~~~~~~-~~~~~Ll~~-ga~ 93 (93)
T 1n0q_A 75 AARNGHL-EVVKLLLEA-GAY 93 (93)
T ss_dssp HHHTTCH-HHHHHHHHT-TCC
T ss_pred HHHcCCH-HHHHHHHHc-CCC
Confidence 9999999 999999984 653
No 109
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.82 E-value=1.2e-19 Score=186.83 Aligned_cols=128 Identities=23% Similarity=0.198 Sum_probs=118.1
Q ss_pred hhhHHHHHHHHcCCHHHHHHHHccCCCcc------ccccCCCCChHHHHHHHc---CCHHHHHHHHHHhhhhcccccccc
Q 004286 9 QLKKGLFKSAMKGKWNEVVENYGKDDRIH------EARITRSGGTALHIAVSD---GQEEIVEDLVRIIHEKQQLKVLKI 79 (763)
Q Consensus 9 ~~~~~L~~aa~~g~~~~v~~lL~~~~~~~------~~~~d~~g~TpLh~A~~~---g~~~~v~~Ll~~g~~~~~~~~~~~ 79 (763)
..-.+|+.|+..|+.+.+..++.. +.+ ++..|..|+||||+||.. |+.+++++|+++| +++|.
T Consensus 129 ~~l~~l~~a~~~~d~~~~~~ll~~--g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~g------a~in~ 200 (278)
T 1dcq_A 129 AKLHSLCEAVKTRDIFGLLQAYAD--GVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNS------GNLDK 200 (278)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHT--TCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHC------SCTTC
T ss_pred hhhhhhhhHhhhcccHHHHHHHHh--hcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCC------CCccc
Confidence 345789999999999999999988 555 445588999999999999 8999999999998 77999
Q ss_pred CCCCCchHHHHHHHcCCHHHHHHHHhcCCCccCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCC
Q 004286 80 GDERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAARHGHKDAFLCLHYLCASVD 145 (763)
Q Consensus 80 ~d~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~ 145 (763)
+|..|+||||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..|+.+++++|+++|++..
T Consensus 201 ~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad-~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~ 265 (278)
T 1dcq_A 201 QTGKGSTALHYCCLTDNAECLKLLLRGKAS-IEIANESGETPLDIAKRLKHEHCEELLTQALSGRF 265 (278)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTCC
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 999999999999999999999999999999 99999999999999999999999999999998654
No 110
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.80 E-value=4.2e-20 Score=163.19 Aligned_cols=108 Identities=27% Similarity=0.306 Sum_probs=80.2
Q ss_pred cCCCCCchHHHHHHHcCCHHHHHHHHhcCCCccCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCccccCCCCCh
Q 004286 79 IGDERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAARHGHKDAFLCLHYLCASVDDGYNYSRRKNGET 158 (763)
Q Consensus 79 ~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~d~~G~T 158 (763)
.+|.+|+||||+|+..|+.+++++|++++++ ++.+|..|.||||+|+..|+.+++++|+++|++++ .+|..|.|
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-----~~d~~g~t 77 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGAD-VNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVN-----ARSKDGNT 77 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCC-SSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTT-----CCCTTCCC
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCc-----ccCCCCCC
Confidence 4567777777777777777777777777776 77777777777777777777777777777777776 67777777
Q ss_pred HHHHHHHcCChHHHHHHHHHhccccccccccCCCcH
Q 004286 159 ILHYAISGYYFVDLAFQIIHLYEKLVNFVNERGVSP 194 (763)
Q Consensus 159 pLh~A~~~g~~~~iv~~LL~~~~~~~~~~d~~G~Tp 194 (763)
|||+|+..++. +++++|++ .|++++.++..|.||
T Consensus 78 pl~~A~~~~~~-~~~~~Ll~-~ga~~n~~~~~~~~~ 111 (115)
T 2l6b_A 78 PEHLAKKNGHH-EIVKLLDA-KGADVNARSWGSSHH 111 (115)
T ss_dssp TTHHHHTTTCH-HHHHHHHT-TSSSHHHHSCCCC--
T ss_pred HHHHHHHCCCH-HHHHHHHH-cCCCCCcCCcccccc
Confidence 77777777777 77777777 477777777777766
No 111
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.80 E-value=2.6e-20 Score=164.56 Aligned_cols=109 Identities=27% Similarity=0.381 Sum_probs=101.6
Q ss_pred ccCCCCChHHHHHHHcCCHHHHHHHHHHhhhhccccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCccCCCCCCCC
Q 004286 40 RITRSGGTALHIAVSDGQEEIVEDLVRIIHEKQQLKVLKIGDERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENE 119 (763)
Q Consensus 40 ~~d~~g~TpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~ 119 (763)
.+|.+|+||||+||..|+.+++++|+++| ++++.+|..|+||||+|+..|+.+++++|+++|++ ++.+|..|.
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g------~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~d~~g~ 76 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKG------ADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGAD-VNARSKDGN 76 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTT------CCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCC-TTCCCTTCC
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcC------CCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCC-CcccCCCCC
Confidence 46889999999999999999999999988 67899999999999999999999999999999998 999999999
Q ss_pred hHHHHHHHcCCHHHHHHHHHcCCCCCCCCccccCCCCChHH
Q 004286 120 TPFFLAARHGHKDAFLCLHYLCASVDDGYNYSRRKNGETIL 160 (763)
Q Consensus 120 TpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~d~~G~TpL 160 (763)
||||+|+..|+.+++++|+++|++++ .++..|.||=
T Consensus 77 tpl~~A~~~~~~~~~~~Ll~~ga~~n-----~~~~~~~~~~ 112 (115)
T 2l6b_A 77 TPEHLAKKNGHHEIVKLLDAKGADVN-----ARSWGSSHHH 112 (115)
T ss_dssp CTTHHHHTTTCHHHHHHHHTTSSSHH-----HHSCCCC---
T ss_pred CHHHHHHHCCCHHHHHHHHHcCCCCC-----cCCccccccc
Confidence 99999999999999999999999998 8999998873
No 112
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.80 E-value=2.4e-19 Score=191.08 Aligned_cols=147 Identities=17% Similarity=0.157 Sum_probs=117.0
Q ss_pred hHHHHHHHHc-CCHHHHHHHHccCCCccccccC--CCCChHHHHHHHcCCHHHHHHHHHHhhhhccccccccCCCCCchH
Q 004286 11 KKGLFKSAMK-GKWNEVVENYGKDDRIHEARIT--RSGGTALHIAVSDGQEEIVEDLVRIIHEKQQLKVLKIGDERGSTP 87 (763)
Q Consensus 11 ~~~L~~aa~~-g~~~~v~~lL~~~~~~~~~~~d--~~g~TpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~d~~g~Tp 87 (763)
.++||.|+.. |+.+.+..+|.. +++++..+ ..|+||||+||..|+.++|++|+++| ++++.+|..|+||
T Consensus 200 ~t~L~~Aa~~~g~~~~v~~LL~~--Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~G------advn~~d~~G~Tp 271 (368)
T 3jue_A 200 GALLFRASGHPPSLPTMADALAH--GADVNWVNGGQDNATPLIQATAANSLLACEFLLQNG------ANVNQADSAGRGP 271 (368)
T ss_dssp HHHHHHHTSSSCCHHHHHHHHHT--TCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTT------CCTTCCCTTSCCH
T ss_pred CcHHHHHHHccCCHHHHHHHHHc--CCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcC------CCCCCCCCCCCCH
Confidence 5689999999 999999999987 88888888 89999999999999999999999998 7799999999999
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCccCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCccccCCCCChHHHHHHHcC
Q 004286 88 LHIAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAARHGHKDAFLCLHYLCASVDDGYNYSRRKNGETILHYAISGY 167 (763)
Q Consensus 88 Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~d~~G~TpLh~A~~~g 167 (763)
||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..|+.+++++|++.+.... .....+..+.|+|+.+....
T Consensus 272 Lh~A~~~g~~~~v~~LL~~Gad-~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~--~~~~~~~~~~t~l~i~~~~~ 348 (368)
T 3jue_A 272 LHHATILGHTGLACLFLKRGAD-LGARDSEGRDPLTIAMETANADIVTLLRLAKMREA--EAAQGQAGDETYLDIFRDFS 348 (368)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC-------------------------
T ss_pred HHHHHHcCcHHHHHHHHHCcCC-CCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcc--cccccCCCCCCHHHHHHHHH
Confidence 9999999999999999999999 99999999999999999999999999998875432 22246677889998876654
Q ss_pred C
Q 004286 168 Y 168 (763)
Q Consensus 168 ~ 168 (763)
.
T Consensus 349 ~ 349 (368)
T 3jue_A 349 L 349 (368)
T ss_dssp -
T ss_pred h
Confidence 3
No 113
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.71 E-value=2.8e-17 Score=143.67 Aligned_cols=93 Identities=24% Similarity=0.228 Sum_probs=61.4
Q ss_pred cccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCccCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCccccCCCC
Q 004286 77 LKIGDERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAARHGHKDAFLCLHYLCASVDDGYNYSRRKNG 156 (763)
Q Consensus 77 ~~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~d~~G 156 (763)
+...|.+|+||||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..|+.+++++|+++|++++ .+|..|
T Consensus 17 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~-----~~d~~g 90 (110)
T 2zgd_A 17 GSHMGSDLGKKLLEAARAGQDDEVRILMANGAD-VAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVX-----AQDKFG 90 (110)
T ss_dssp -----CCHHHHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-----CCCTTS
T ss_pred ccccCCccchHHHHHHHcCCHHHHHHHHHcCCC-CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc-----ccccCC
Confidence 444566667777777777777777777776666 66666677777777777777777777777776666 666677
Q ss_pred ChHHHHHHHcCChHHHHHHH
Q 004286 157 ETILHYAISGYYFVDLAFQI 176 (763)
Q Consensus 157 ~TpLh~A~~~g~~~~iv~~L 176 (763)
.||||+|+..|+. +++++|
T Consensus 91 ~tpl~~A~~~~~~-~~~~~L 109 (110)
T 2zgd_A 91 KTAFDISIDNGNE-DLAEIL 109 (110)
T ss_dssp CCHHHHHHHHTCH-HHHHHH
T ss_pred CcHHHHHHHcCCH-HHHHHh
Confidence 7777777777776 666654
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.71 E-value=2.4e-17 Score=144.11 Aligned_cols=95 Identities=25% Similarity=0.316 Sum_probs=85.2
Q ss_pred ccccccCCCCChHHHHHHHcCCHHHHHHHHHHhhhhccccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCccCCCC
Q 004286 36 IHEARITRSGGTALHIAVSDGQEEIVEDLVRIIHEKQQLKVLKIGDERGSTPLHIAAGLGNVSMCKCIATADPRLIGERN 115 (763)
Q Consensus 36 ~~~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~ 115 (763)
......|.+|+||||+||..|+.+++++|++.| ++++.+|..|+||||+|+..|+.+++++|+++|++ ++.+|
T Consensus 15 ~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g------~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~-~~~~d 87 (110)
T 2zgd_A 15 PRGSHMGSDLGKKLLEAARAGQDDEVRILMANG------ADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGAD-VXAQD 87 (110)
T ss_dssp -------CCHHHHHHHHHHHTCHHHHHHHHHTT------CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCC
T ss_pred CcccccCCccchHHHHHHHcCCHHHHHHHHHcC------CCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-ccccc
Confidence 344557889999999999999999999999987 67899999999999999999999999999999998 99999
Q ss_pred CCCChHHHHHHHcCCHHHHHHH
Q 004286 116 HENETPFFLAARHGHKDAFLCL 137 (763)
Q Consensus 116 ~~g~TpLh~A~~~g~~~~v~~L 137 (763)
..|+||||+|+..|+.+++++|
T Consensus 88 ~~g~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 88 KFGKTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp TTSCCHHHHHHHHTCHHHHHHH
T ss_pred cCCCcHHHHHHHcCCHHHHHHh
Confidence 9999999999999999999987
No 115
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=37.38 E-value=31 Score=22.15 Aligned_cols=23 Identities=22% Similarity=0.200 Sum_probs=17.4
Q ss_pred hhhhhHHHHHHHHcCCHHHHHHH
Q 004286 7 IDQLKKGLFKSAMKGKWNEVVEN 29 (763)
Q Consensus 7 ~~~~~~~L~~aa~~g~~~~v~~l 29 (763)
++.++..+..||..|+.+.+..|
T Consensus 10 I~aiEQqiyvA~seGd~etv~~L 32 (40)
T 1gp8_A 10 KDAIRKQMDAAASKGDVETYRKL 32 (40)
T ss_dssp HHHHHHHHHHHHTTSCHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCHHHHHHH
Confidence 46677788888888888877665
No 116
>4aw6_A CAAX prenyl protease 1 homolog; hydrolase, M48 peptidase, integral membrane protein, prelami processing, ageing, progeria; HET: PC1; 3.40A {Homo sapiens} PDB: 2ypt_A
Probab=26.87 E-value=2.4e+02 Score=30.12 Aligned_cols=28 Identities=21% Similarity=0.428 Sum_probs=16.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHccCCCC
Q 004286 729 LPVTLFAIARFPLYYYLIWAIFKKVPQR 756 (763)
Q Consensus 729 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 756 (763)
+++.++....+|.++.=+...+.+++++
T Consensus 205 ~~~~l~~~~iyP~~I~PLfnk~~Pl~dg 232 (482)
T 4aw6_A 205 LVVSLVLVTIYADYIAPLFDKFTPLPEG 232 (482)
T ss_dssp HHHHHHHHHHHHHHTHHHHSCEEECCSS
T ss_pred HHHHHHHHHHHHHHHHHHcCCCccCCcH
Confidence 3445566666787766555566666554
No 117
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=23.55 E-value=2e+02 Score=20.27 Aligned_cols=13 Identities=23% Similarity=0.049 Sum_probs=7.6
Q ss_pred HHHHccCCCCCCC
Q 004286 747 WAIFKKVPQRSYQ 759 (763)
Q Consensus 747 ~~~~~~~~~~~~~ 759 (763)
+..|.|..++...
T Consensus 32 K~GFFKR~~~~~~ 44 (54)
T 2l8s_A 32 KIGFFKRPLKKKM 44 (54)
T ss_dssp HHHHTTSCCSCCC
T ss_pred HcCcccCCCcchh
Confidence 5566666665443
No 118
>4ev6_A Magnesium transport protein CORA; membrane protein, ION transporter, metal TR; HET: UMQ; 3.20A {Methanocaldococcus jannaschii}
Probab=23.07 E-value=79 Score=32.09 Aligned_cols=22 Identities=9% Similarity=0.034 Sum_probs=18.1
Q ss_pred HHHHHHHHHHHHHHHhhHhhhh
Q 004286 691 TSLFVSIASMMISFWAGHFLVV 712 (763)
Q Consensus 691 ~~l~~s~~~m~~af~~~~~~~~ 712 (763)
.+..+|+.++...|++|+|-+-
T Consensus 281 ~LTiit~IflP~T~IaGiyGMN 302 (339)
T 4ev6_A 281 ILTMVTTIFAVPMWITGIYGMN 302 (339)
T ss_dssp HHHHHHHHSSHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHhhccCc
Confidence 4678888899999999999553
No 119
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=23.04 E-value=3.6e+02 Score=24.21 Aligned_cols=135 Identities=7% Similarity=-0.077 Sum_probs=85.8
Q ss_pred hhHHHHHHHHcCCHHHHHHHHccCCCccccccCCCCC-hHHHHHHHcCCHHHHHHHHHHhhhhccccccccCCCCCchHH
Q 004286 10 LKKGLFKSAMKGKWNEVVENYGKDDRIHEARITRSGG-TALHIAVSDGQEEIVEDLVRIIHEKQQLKVLKIGDERGSTPL 88 (763)
Q Consensus 10 ~~~~L~~aa~~g~~~~v~~lL~~~~~~~~~~~d~~g~-TpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~d~~g~TpL 88 (763)
.++.+-.|...|+.+....+...- .+..-| +.=..|...|+.++++....+. .|- ...+
T Consensus 8 ~~~rF~LAL~lg~l~~A~e~a~~l-------~~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~-----------~D~--~~L~ 67 (177)
T 3mkq_B 8 PHIRFDLALEYGNLDAALDEAKKL-------NDSITWERLIQEALAQGNASLAEMIYQTQ-----------HSF--DKLS 67 (177)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHH-------CCHHHHHHHHHHHHHTTCHHHHHHHHHHT-----------TCH--HHHH
T ss_pred hHHHHHHHHhcCCHHHHHHHHHHh-------CCHHHHHHHHHHHHHcCChHHHHHHHHHh-----------CCH--HHHH
Confidence 355677788899999888887651 112223 3334566789999999888764 122 2344
Q ss_pred HHHHHcCCHHHHHHHHhcCCCccCCCCCCCChHHHHHHHcCCH-HHHHHHHHcCCCCCCCCccccCCCCChHHHHHHHcC
Q 004286 89 HIAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAARHGHK-DAFLCLHYLCASVDDGYNYSRRKNGETILHYAISGY 167 (763)
Q Consensus 89 h~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~g~TpLh~A~~~g~~-~~v~~Ll~~ga~~~~~~~~~~d~~G~TpLh~A~~~g 167 (763)
.+....|+.+-++.|.+.. ....+-....+.+-..|.. +++++|.+.|--. -+...|-.+|
T Consensus 68 ~Ly~~tg~~e~L~kla~iA-----~~~g~~n~af~~~l~lGdv~~~i~lL~~~~r~~-------------eA~~~A~t~g 129 (177)
T 3mkq_B 68 FLYLVTGDVNKLSKMQNIA-----QTREDFGSMLLNTFYNNSTKERSSIFAEGGSLP-------------LAYAVAKANG 129 (177)
T ss_dssp HHHHHHTCHHHHHHHHHHH-----HHTTCHHHHHHHHHHHTCHHHHHHHHHHTTCHH-------------HHHHHHHHTT
T ss_pred HHHHHhCCHHHHHHHHHHH-----HHCccHHHHHHHHHHcCCHHHHHHHHHHCCChH-------------HHHHHHHHcC
Confidence 4455578877777665421 1122334567777777876 5777777654311 2456677889
Q ss_pred ChHHHHHHHHHhcccc
Q 004286 168 YFVDLAFQIIHLYEKL 183 (763)
Q Consensus 168 ~~~~iv~~LL~~~~~~ 183 (763)
.. ++++.+++..|.+
T Consensus 130 ~~-~~a~~~~~~~~~~ 144 (177)
T 3mkq_B 130 DE-AAASAFLEQAEVD 144 (177)
T ss_dssp CH-HHHHHHHHHTTCC
T ss_pred cH-HHHHHHHHHhCCc
Confidence 98 9999999876643
No 120
>4hkr_A Calcium release-activated calcium channel protein; ORAI1, eukaryotic membrane protein, membran protein, ION channel, STIM, membrane; 3.35A {Drosophila melanogaster} PDB: 4hks_A
Probab=21.21 E-value=4.8e+02 Score=23.91 Aligned_cols=29 Identities=21% Similarity=0.230 Sum_probs=21.3
Q ss_pred cccchhhhhhHHHHHHHHHHHHHHHHHhh
Q 004286 642 LAFNVFAFSSLVALSFSMTALVVFFAIKT 670 (763)
Q Consensus 642 ~~f~~F~~~~~~a~~~s~~~~~~~~~~~~ 670 (763)
..+..|.++.++-+.+.+.++++-..+++
T Consensus 58 ~LLi~fav~Ttllv~vml~AlMIsTcILP 86 (214)
T 4hkr_A 58 GMLIAFAICTTLLVAVHMLALMISTCILP 86 (214)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 35778888888888888877777655555
No 121
>1vry_A Glycine receptor alpha-1 chain; second transmembrane domain, third transmembrane domain, membrane protein; NMR {Homo sapiens} SCOP: j.35.1.1
Probab=20.99 E-value=1.7e+02 Score=22.27 Aligned_cols=37 Identities=14% Similarity=0.204 Sum_probs=24.9
Q ss_pred hHhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHH
Q 004286 707 GHFLVVRDKLKSAAFPVYAVTCLPVTLFAIARFPLYY 743 (763)
Q Consensus 707 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 743 (763)
+.-.-+|......++-+|.++|+.+.|.+++.|..--
T Consensus 21 ~~~~~lPkVSYikAiDvw~~~C~~FVF~aLlEya~V~ 57 (76)
T 1vry_A 21 GSRASLPKVSYVKAIDIWLAVCLLFVFSALLEYAAVN 57 (76)
T ss_dssp CTTTCCCSHHHHHHHHHTHHHHHHHHHHHHHHHHHHH
T ss_pred CcccCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333455555566777888888888888887776533
No 122
>3rhw_A Avermectin-sensitive glutamate-gated chloride CHA alpha; membrane protein, transport protein, Cys-loop receptor, LIGA ION channel, neurotransmitter receptor; HET: NAG IVM LMT UND; 3.26A {Caenorhabditis elegans} PDB: 3ri5_A* 3ria_A* 3rif_A*
Probab=20.98 E-value=3.6e+02 Score=27.10 Aligned_cols=42 Identities=19% Similarity=0.175 Sum_probs=25.4
Q ss_pred HHHHhhHhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHH
Q 004286 702 ISFWAGHFLVVRDKLKSAAFPVYAVTCLPVTLFAIARFPLYY 743 (763)
Q Consensus 702 ~af~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 743 (763)
..|...+--.+|+.....++-+|.++|+.+.+..++.+-+..
T Consensus 257 tv~~~~~~~~lP~~S~v~~id~~~~~~~~~v~~slle~~~v~ 298 (347)
T 3rhw_A 257 TAQSAGINSQLPPVSYIKAIDVWIGACMTFIFCALLEFALVN 298 (347)
T ss_dssp HHHHHHHHHTSCCCSSCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhCCCccceeHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444445667666666777777777776666665544433
Done!