Your job contains 1 sequence.
>004293
MENFPFHDGSIYDMLDTRHTDTRPDVNHSLQMHSSLVRRLSQERELEGHQGCVNAISWNS
KGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPETSDELVVSGAGDAEVR
LFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHVVWSASEDGTLRQHDFRQG
SSCPPAGSSHQECRNILLDLRCGAKRSLADPPKQTLSLKSCDISSTRPHLLLVGGSDAFA
RLYDRRMLPPLTSCQKRMSPPPCVNYFCPMHLSEHGRSSLHLTHVTFSPNGEEVLLSYSG
EHVYLMDVNHAGGRAMRYTVGDASKIMSFTPTLNGLELQPPIHDFLQTNIRVRGEVATGL
GKCRMLVEIARNSLEEGKHPYYGIEACNEVLEGHLSGIGPMLRHECLCIRAALLLKRKWK
NDAQMAIRDCYNARRIDSSSFRAHLYMSEALEQLCKYKEALDFAIAAQCLDPSNSVMAEK
VENIKKHIAAAETEKNNKANDGGARSEPRTGRVLSLSDIIYRSEANSDASQDGPRSERED
SDYDEEVEVDFHTSVPGDEGRDVEANFLHGSLNVRIHRRGDSARETVDANGSSGSPSSSS
QNDRIPYQPETVIDMKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGR
LIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIWTPSASVPSIVSGGAAGPDTADVLE
AMESNQRKLSRNREHSLSYELLERFHMHEFSEGSLRPFECAQS
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 004293
(763 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2183735 - symbol:ASG2 "AT5G10940" species:3702... 2696 1.5e-280 1
UNIPROTKB|Q8N5D0 - symbol:WDTC1 "WD and tetratricopeptide... 427 1.3e-64 2
UNIPROTKB|E2RA21 - symbol:WDTC1 "Uncharacterized protein"... 427 1.4e-64 2
MGI|MGI:2685541 - symbol:Wdtc1 "WD and tetratricopeptide ... 375 1.9e-64 3
UNIPROTKB|B6CVL4 - symbol:WDTC1 "Uncharacterized protein"... 427 2.2e-64 2
RGD|1310362 - symbol:Wdtc1 "WD and tetratricopeptide repe... 372 4.3e-64 3
UNIPROTKB|E1C4X5 - symbol:WDTC1 "Uncharacterized protein"... 363 1.0e-62 3
FB|FBgn0000057 - symbol:adp "adipose" species:7227 "Droso... 312 1.7e-57 3
POMBASE|SPBC609.03 - symbol:iqw1 "WD repeat protein, Iqw1... 375 3.4e-49 2
UNIPROTKB|F1NU19 - symbol:F1NU19 "Uncharacterized protein... 271 8.4e-46 3
MGI|MGI:1921356 - symbol:Dcaf6 "DDB1 and CUL4 associated ... 265 1.6e-45 3
UNIPROTKB|Q5R9B8 - symbol:DCAF6 "DDB1- and CUL4-associate... 264 4.0e-45 3
UNIPROTKB|Q58WW2 - symbol:DCAF6 "DDB1- and CUL4-associate... 264 4.0e-45 3
UNIPROTKB|F1MBJ1 - symbol:DCAF6 "Uncharacterized protein"... 264 4.4e-45 3
UNIPROTKB|E2REY6 - symbol:DCAF6 "Uncharacterized protein"... 264 6.5e-45 3
RGD|1561961 - symbol:Dcaf6 "DDB1 and CUL4 associated fact... 263 1.4e-44 4
TAIR|locus:2121164 - symbol:AT4G38480 "AT4G38480" species... 256 1.3e-42 3
UNIPROTKB|Q5R448 - symbol:DCAF8 "DDB1- and CUL4-associate... 208 4.0e-39 3
RGD|1308513 - symbol:Dcaf8 "DDB1 and CUL4 associated fact... 208 2.0e-38 3
UNIPROTKB|Q5TAQ9 - symbol:DCAF8 "DDB1- and CUL4-associate... 208 2.1e-38 3
MGI|MGI:91860 - symbol:Dcaf8 "DDB1 and CUL4 associated fa... 208 4.1e-38 3
UNIPROTKB|G3V3G9 - symbol:DCAF8 "DDB1- and CUL4-associate... 208 6.8e-38 3
WB|WBGene00044440 - symbol:adpr-1 species:6239 "Caenorhab... 214 2.2e-37 3
DICTYBASE|DDB_G0269686 - symbol:DDB_G0269686 "WD40 repeat... 236 2.9e-37 4
ASPGD|ASPL0000058488 - symbol:AN0287 species:162425 "Emer... 235 2.5e-36 3
TAIR|locus:2132796 - symbol:AT4G35140 "AT4G35140" species... 255 4.4e-36 2
GENEDB_PFALCIPARUM|PF14_0262 - symbol:PF14_0262 "hypothet... 215 2.3e-33 3
UNIPROTKB|Q8ILI1 - symbol:PF14_0262 "Putative uncharacter... 215 2.3e-33 3
UNIPROTKB|G3N3E5 - symbol:WDR5 "WD repeat-containing prot... 162 3.6e-19 3
FB|FBgn0040066 - symbol:wds "will die slowly" species:722... 163 6.8e-19 3
UNIPROTKB|Q2KIG2 - symbol:WDR5 "WD repeat-containing prot... 162 7.7e-19 3
UNIPROTKB|P61964 - symbol:WDR5 "WD repeat-containing prot... 162 7.7e-19 3
MGI|MGI:2155884 - symbol:Wdr5 "WD repeat domain 5" specie... 162 7.7e-19 3
RGD|1305159 - symbol:Wdr5 "WD repeat domain 5" species:10... 162 7.7e-19 3
UNIPROTKB|F1S034 - symbol:WDR5 "Uncharacterized protein" ... 162 7.7e-19 3
UNIPROTKB|Q5M786 - symbol:wdr5 "WD repeat-containing prot... 162 4.0e-18 3
MGI|MGI:1916794 - symbol:Wdr5b "WD repeat domain 5B" spec... 142 2.6e-16 3
UNIPROTKB|H0YEI6 - symbol:WDTC1 "WD and tetratricopeptide... 209 7.0e-16 1
DICTYBASE|DDB_G0287273 - symbol:wdr5 "WD40 repeat-contain... 149 1.6e-15 3
ZFIN|ZDB-GENE-060929-808 - symbol:dcaf5 "ddb1 and cul4 as... 152 5.3e-15 2
TAIR|locus:2097435 - symbol:WDR5a "AT3G49660" species:370... 137 6.7e-15 3
UNIPROTKB|A8X8C6 - symbol:tag-125 "WD repeat-containing p... 140 7.8e-15 3
WB|WBGene00006474 - symbol:wdr-5.1 species:6239 "Caenorha... 141 2.7e-14 2
UNIPROTKB|Q17963 - symbol:tag-125 "WD repeat-containing p... 141 2.7e-14 2
TAIR|locus:2140215 - symbol:WDR5b "AT4G02730" species:370... 134 3.9e-14 2
UNIPROTKB|G3V6K4 - symbol:Dcaf5 "Protein Dcaf5" species:1... 141 2.6e-13 2
MGI|MGI:2444785 - symbol:Dcaf5 "DDB1 and CUL4 associated ... 141 3.3e-13 2
UNIPROTKB|Q96JK2 - symbol:DCAF5 "DDB1- and CUL4-associate... 141 4.2e-13 2
UNIPROTKB|E2QXZ3 - symbol:DCAF5 "Uncharacterized protein"... 141 4.2e-13 2
ASPGD|ASPL0000006214 - symbol:AN6385 species:162425 "Emer... 144 1.2e-12 2
ZFIN|ZDB-GENE-040426-1954 - symbol:katnb1 "katanin p80 (W... 126 9.2e-11 2
TAIR|locus:2176085 - symbol:AT5G64730 "AT5G64730" species... 114 1.6e-10 2
UNIPROTKB|Q8N136 - symbol:WDR69 "Outer row dynein assembl... 124 3.5e-10 2
ZFIN|ZDB-GENE-050419-255 - symbol:daw1 "dynein assembly f... 115 4.0e-10 2
DICTYBASE|DDB_G0288375 - symbol:lis1 "lissencephaly-1 hom... 113 5.4e-10 2
ASPGD|ASPL0000032070 - symbol:fbx23 species:162425 "Emeri... 149 1.0e-09 2
UNIPROTKB|Q0P593 - symbol:WDR69 "Outer row dynein assembl... 124 1.1e-09 2
UNIPROTKB|F1NUJ8 - symbol:POC1A "Uncharacterized protein"... 119 1.3e-09 2
WB|WBGene00015974 - symbol:C18E3.5 species:6239 "Caenorha... 122 3.5e-09 2
UNIPROTKB|Q5ZIU8 - symbol:KATNB1 "Katanin p80 WD40 repeat... 125 4.8e-09 2
RGD|1565004 - symbol:Poc1a "POC1 centriolar protein homol... 116 6.2e-09 2
UNIPROTKB|F6UQ08 - symbol:F6UQ08 "Uncharacterized protein... 124 9.5e-09 2
UNIPROTKB|F1SIZ2 - symbol:POC1A "Uncharacterized protein"... 113 9.7e-09 2
UNIPROTKB|F1MFJ6 - symbol:TBL1XR1 "Uncharacterized protei... 150 1.1e-08 2
DICTYBASE|DDB_G0289711 - symbol:morg1 "mitogen-activated ... 110 1.1e-08 2
MGI|MGI:1917485 - symbol:Poc1a "POC1 centriolar protein h... 113 1.3e-08 2
UNIPROTKB|Q9BZK7 - symbol:TBL1XR1 "F-box-like/WD repeat-c... 149 1.4e-08 2
UNIPROTKB|F1SGD0 - symbol:TBL1XR1 "Uncharacterized protei... 149 1.4e-08 2
MGI|MGI:2441730 - symbol:Tbl1xr1 "transducin (beta)-like ... 149 1.4e-08 2
RGD|1560053 - symbol:Tbl1xr1 "transducin (beta)-like 1 X-... 149 1.4e-08 2
ZFIN|ZDB-GENE-040426-1993 - symbol:poc1a "POC1 centriolar... 125 1.5e-08 2
UNIPROTKB|E1BQV9 - symbol:KATNB1 "Katanin p80 WD40 repeat... 125 1.6e-08 2
WB|WBGene00004767 - symbol:sel-10 species:6239 "Caenorhab... 128 1.6e-08 2
UNIPROTKB|Q93794 - symbol:sel-10 "F-box/WD repeat-contain... 128 1.6e-08 2
UNIPROTKB|Q8NBT0 - symbol:POC1A "POC1 centriolar protein ... 112 1.8e-08 2
ASPGD|ASPL0000032162 - symbol:AN8468 species:162425 "Emer... 126 1.8e-08 3
UNIPROTKB|H3BPK1 - symbol:KATNB1 "Katanin p80 WD40 repeat... 124 2.0e-08 2
UNIPROTKB|E2QTQ5 - symbol:KATNB1 "Uncharacterized protein... 124 2.1e-08 2
UNIPROTKB|Q9BVA0 - symbol:KATNB1 "Katanin p80 WD40 repeat... 124 2.1e-08 2
RGD|1311256 - symbol:Katnb1 "katanin p80 (WD repeat conta... 124 2.1e-08 2
MGI|MGI:1921437 - symbol:Katnb1 "katanin p80 (WD40-contai... 124 2.1e-08 2
RGD|1561436 - symbol:LOC363267 "hypothetical protein LOC3... 120 2.1e-08 2
POMBASE|SPAC29E6.01 - symbol:pof11 "F-box protein Pof11" ... 109 2.1e-08 3
UNIPROTKB|A6QQU1 - symbol:KATNB1 "KATNB1 protein" species... 124 2.1e-08 2
UNIPROTKB|H3BPD8 - symbol:KATNB1 "Katanin p80 WD40 repeat... 124 2.4e-08 2
TAIR|locus:2154438 - symbol:AT5G23430 "AT5G23430" species... 110 2.9e-08 2
MGI|MGI:1923896 - symbol:Wdr38 "WD repeat domain 38" spec... 106 3.2e-08 2
ASPGD|ASPL0000003533 - symbol:AN6867 species:162425 "Emer... 121 3.7e-08 2
TAIR|locus:2159562 - symbol:AT5G08560 "AT5G08560" species... 141 4.6e-08 2
FB|FBgn0038927 - symbol:CG6015 species:7227 "Drosophila m... 112 4.7e-08 2
UNIPROTKB|E1BV27 - symbol:TBL1X "Uncharacterized protein"... 147 4.8e-08 2
MGI|MGI:1336172 - symbol:Tbl1x "transducin (beta)-like 1 ... 147 4.9e-08 2
RGD|1563868 - symbol:Tbl1x "transducin (beta)-like 1 X-li... 147 4.9e-08 2
UNIPROTKB|B7TCI5 - symbol:TBL1X "Transducin beta-like 1" ... 147 4.9e-08 2
UNIPROTKB|I3L2U8 - symbol:PAFAH1B1 "Platelet-activating f... 115 5.1e-08 2
UNIPROTKB|O60907 - symbol:TBL1X "F-box-like/WD repeat-con... 147 5.1e-08 2
UNIPROTKB|F1SEX9 - symbol:WDR83 "Uncharacterized protein"... 107 5.1e-08 2
ZFIN|ZDB-GENE-040116-3 - symbol:pafah1b1b "platelet-activ... 114 5.7e-08 2
RGD|1306947 - symbol:Wdr83 "WD repeat domain 83" species:... 106 7.0e-08 2
UNIPROTKB|F1P0F4 - symbol:KATNB1 "Katanin p80 WD40 repeat... 125 7.0e-08 2
WARNING: Descriptions of 444 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2183735 [details] [associations]
symbol:ASG2 "AT5G10940" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0000956
"nuclear-transcribed mRNA catabolic process" evidence=RCA]
[GO:0006346 "methylation-dependent chromatin silencing"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0009630 "gravitropism" evidence=RCA] [GO:0010413
"glucuronoxylan metabolic process" evidence=RCA] [GO:0016246 "RNA
interference" evidence=RCA] [GO:0031048 "chromatin silencing by
small RNA" evidence=RCA] [GO:0045132 "meiotic chromosome
segregation" evidence=RCA] [GO:0045492 "xylan biosynthetic process"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR011990 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005886 GO:GO:0009506
EMBL:CP002688 GenomeReviews:BA000015_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 Gene3D:1.25.40.10 GO:GO:0080008 KO:K11807
OMA:HRYCGHC eggNOG:NOG288984 EMBL:AY039964 EMBL:AY150424
IPI:IPI00539536 RefSeq:NP_568242.1 UniGene:At.22156
ProteinModelPortal:Q94BQ3 SMR:Q94BQ3 IntAct:Q94BQ3 PaxDb:Q94BQ3
PRIDE:Q94BQ3 EnsemblPlants:AT5G10940.1 GeneID:830961
KEGG:ath:AT5G10940 TAIR:At5g10940 HOGENOM:HOG000239804
InParanoid:Q94BQ3 PhylomeDB:Q94BQ3 ProtClustDB:CLSN2689594
ArrayExpress:Q94BQ3 Genevestigator:Q94BQ3 Uniprot:Q94BQ3
Length = 757
Score = 2696 (954.1 bits), Expect = 1.5e-280, P = 1.5e-280
Identities = 522/767 (68%), Positives = 603/767 (78%)
Query: 1 MENFPFHDGSIYDMLDTRHTDTRPDVNHSLQMHSSLVRRLSQERELEGHQGCVNAISWNS 60
M+N FHDG+I+++L TR D +V+ +Q HSSLVRRLSQE+ELEGHQGCVNA++WNS
Sbjct: 1 MDNLSFHDGNIFNLLHTRSQDPSHEVDQRMQFHSSLVRRLSQEQELEGHQGCVNALAWNS 60
Query: 61 KGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPETSDELVVSGAGDAEVR 120
GSLLISGSDD IN+W+YSSRKLLHSI+TGH+AN+FCTKFVPETSDELVVSGAGDAEVR
Sbjct: 61 NGSLLISGSDDLRINIWNYSSRKLLHSIDTGHTANIFCTKFVPETSDELVVSGAGDAEVR 120
Query: 121 LFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHVVWSASEDGTLRQHDFRQG 180
LFN SR SGR DDNAI PSALYQCHTRRVKKLAVE GNP+VVWSASEDGTLRQHDFR+
Sbjct: 121 LFNTSRLSGRAEDDNAIIPSALYQCHTRRVKKLAVEPGNPNVVWSASEDGTLRQHDFRES 180
Query: 181 SSCPPAGSSHQECRNILLDLRCGAKRSLADPPKQTLSLKSCDISSTRPHLLLVGGSDAFA 240
+SCPPAG++HQECR++LLDLR GAKR+LADPPKQTLSLKSCDIS+TRPHLLLVGGSDAFA
Sbjct: 181 TSCPPAGTAHQECRSVLLDLRSGAKRALADPPKQTLSLKSCDISATRPHLLLVGGSDAFA 240
Query: 241 RLYDRRMLPPLTSCQKRMSPPPCVNYFCPMHLSEHGRSSLHLTHVTFSPNGEEVLLSYSG 300
RLYDRRMLPPL S +KRM PPPCVNYFCPMHLSE GR++LHLTHVTFSPNGEEVLLSYSG
Sbjct: 241 RLYDRRMLPPLASSRKRMPPPPCVNYFCPMHLSERGRTNLHLTHVTFSPNGEEVLLSYSG 300
Query: 301 EHVYLMDVNHA--GGRAMRYTVGDASKIMSFTPTLNGLELQPPIHDFLQTNIRVRGEVAT 358
EHVYLM+VN+ M+YT GD + SF+ L+ +E P + Q AT
Sbjct: 301 EHVYLMNVNNGICSTGIMQYTPGDVDNLFSFSNNLHDVESPPQVSTTPQNGFHRSSNAAT 360
Query: 359 GLGKCRMLVEIARNSLEEGKHPYYGIEACNEVLEGHLSGIGPMLRHECLCIRAALLLKRK 418
+ KC LVEIA+ SLEEG +Y IEA NEVL+ H + I LRHECLC RAALLLKRK
Sbjct: 361 -VKKCTELVEIAKWSLEEGTDVFYAIEAANEVLDAHSNDIESALRHECLCTRAALLLKRK 419
Query: 419 WKNDAQMAIRDCYNARRIDSSSFRAHLYMSEALEQLCKYKEALDFAIAAQCLDPSNSVMA 478
WKNDA MA+RDC+NARRID+SSF+AH YMSEAL+QL K KEALDFA AAQ ++PS++ +
Sbjct: 420 WKNDAHMAVRDCHNARRIDASSFKAHYYMSEALQQLGKCKEALDFATAAQHMNPSDADIV 479
Query: 479 EKVENIKKHIXXXXXXXXXXXXDGGARSEPRTGRVLSLSDIIYRSEANSDASQDGPXXXX 538
KVE+IK+ + G T RVLSLSDI+YRSEANSD+S D
Sbjct: 480 AKVESIKRDLQAAGAEKNEETGAG-------TTRVLSLSDILYRSEANSDSSHDMSRSER 532
Query: 539 XXXXXXXXXXXXFHTSVPGDEGRDVEANFLHGSLNVRIHRRGDSA--RETVDANXXXXXX 596
TS+ DEGRD ++N + GSLN+RIHR GD TVD
Sbjct: 533 EDSDYDEELELDIQTSLSDDEGRDTDSNSMRGSLNLRIHRVGDDKPMENTVD--NASSGT 590
Query: 597 XXXXQNDRIPYQPETVIDMKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEK 656
QNDR YQPE IDMK+RYVGHCNVGTDIKQASFLGQRG+YIASGSDDGRWFIWEK
Sbjct: 591 ASSSQNDRTSYQPEGAIDMKRRYVGHCNVGTDIKQASFLGQRGEYIASGSDDGRWFIWEK 650
Query: 657 QTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIWTPSASVPSIVSGGAAGPDTA 716
QTGRL+K+L+GDE+V+NC+QCHPFD VVATSGIDNTIKIW+P+ASVPSIV+GG+AGP TA
Sbjct: 651 QTGRLMKVLVGDESVLNCIQCHPFDSVVATSGIDNTIKIWSPTASVPSIVAGGSAGPATA 710
Query: 717 DVLEAMESNQRKLSRNREHSLSYELLERFHMHEFSEGSLRPFECAQS 763
+V+E MESNQ+KLSRNRE+ LS EL++RF M EF+EG+ PFEC QS
Sbjct: 711 NVVEVMESNQQKLSRNRENPLSVELMQRFRMQEFAEGNFHPFECTQS 757
>UNIPROTKB|Q8N5D0 [details] [associations]
symbol:WDTC1 "WD and tetratricopeptide repeats protein 1"
species:9606 "Homo sapiens" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0004857 "enzyme inhibitor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006006 "glucose metabolic process" evidence=IEA] [GO:0008361
"regulation of cell size" evidence=IEA] [GO:0032869 "cellular
response to insulin stimulus" evidence=IEA] [GO:0035264
"multicellular organism growth" evidence=IEA] [GO:0042393 "histone
binding" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0045717 "negative regulation of fatty acid
biosynthetic process" evidence=IEA] [GO:0055082 "cellular chemical
homeostasis" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50005 PROSITE:PS50082 PROSITE:PS50293
PROSITE:PS50294 SMART:SM00320 GO:GO:0043231 GO:GO:0005829
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0032869 EMBL:CH471059 GO:GO:0004857 eggNOG:COG2319
GO:GO:0001701 GO:GO:0006006 GO:GO:0008361 GO:GO:0000122
GO:GO:0045717 Gene3D:1.25.40.10 GO:GO:0035264 InterPro:IPR013105
Pfam:PF07719 PDB:3I7N PDBsum:3I7N EMBL:AL663123 EMBL:AL590640
EMBL:AK001734 EMBL:BC032523 EMBL:AB028960 IPI:IPI00186384
IPI:IPI00398202 IPI:IPI00398203 IPI:IPI00398204 IPI:IPI00398205
IPI:IPI00398206 RefSeq:NP_055838.2 UniGene:Hs.469154
ProteinModelPortal:Q8N5D0 SMR:Q8N5D0 DIP:DIP-31627N IntAct:Q8N5D0
STRING:Q8N5D0 PhosphoSite:Q8N5D0 DMDM:41018470 PaxDb:Q8N5D0
PRIDE:Q8N5D0 DNASU:23038 Ensembl:ENST00000319394
Ensembl:ENST00000361771 Ensembl:ENST00000447062 GeneID:23038
KEGG:hsa:23038 UCSC:uc001bno.3 UCSC:uc001bnq.3 CTD:23038
GeneCards:GC01P027561 HGNC:HGNC:29175 HPA:HPA028177 HPA:HPA028180
HPA:HPA028182 neXtProt:NX_Q8N5D0 PharmGKB:PA134981539
HOGENOM:HOG000231334 HOVERGEN:HBG059105 InParanoid:Q8N5D0 KO:K11807
OMA:HRYCGHC OrthoDB:EOG4CRKZJ PhylomeDB:Q8N5D0 ChiTaRS:WDTC1
EvolutionaryTrace:Q8N5D0 GenomeRNAi:23038 NextBio:44050 Bgee:Q8N5D0
CleanEx:HS_WDTC1 Genevestigator:Q8N5D0 GermOnline:ENSG00000142784
GO:GO:0055082 Uniprot:Q8N5D0
Length = 677
Score = 427 (155.4 bits), Expect = 1.3e-64, Sum P(2) = 1.3e-64
Identities = 140/469 (29%), Positives = 210/469 (44%)
Query: 37 VRRLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANV 96
+RRL E EL+GH GCVN + WN KG LL SGSDD H VW K L S+ TGH+AN+
Sbjct: 34 IRRLGLEAELQGHSGCVNCLEWNEKGDLLASGSDDQHTIVWDPLHHKKLLSMHTGHTANI 93
Query: 97 FCTKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVE 156
F KF+P D ++++GA D++V + +L+ + + ++ HT RVK++A
Sbjct: 94 FSVKFLPHAGDRILITGAADSKVHVHDLT------VKETI----HMFGDHTNRVKRIATA 143
Query: 157 VGNPHVVWSASEDGTLRQHDFRQGSSCPPAGSSHQECRNILLDLR--CGA---KRSLADP 211
P+ WSA+EDG +RQ+D R+ S H E +L+DL CG + L
Sbjct: 144 PMWPNTFWSAAEDGLIRQYDLRENSK-------HSE---VLIDLTEYCGQLVEAKCLTVN 193
Query: 212 PKQTLSLKSCDISSTRPHLLLVGGSDAFARLYDRRMLPPL---TSCQKRMS-PPPCVNYF 267
P+ L + ++ P + L + P T C ++ P Y+
Sbjct: 194 PQDNNCLA---VGASGPFVRLYDIRMIHNHRKSMKQSPSAGVHTFCDRQKPLPDGAAQYY 250
Query: 268 C----PMHLSEHGRSS--LHLTHVTFSPNGEEVLLSYSGEHVYLMDVNHAGGRAMRYTVG 321
P+ L ++ L T+VTFSPNG E+L++ GE VYL D+ + + YT
Sbjct: 251 VAGHLPVKLPDYNNRLRVLVATYVTFSPNGTELLVNMGGEQVYLFDLTY---KQRPYTFL 307
Query: 322 DASKIMSFTPTLNGLELQPPIHDFLQTNIRVRGE---VATGLGKCRMLVEIARNSLEEGK 378
K S NG + + + + + + G VE+ LE K
Sbjct: 308 LPRKCHSSGEVQNGKMSTNGVSNGVSNGLHLHSNGFRLPESRGHVSPQVELPPY-LERVK 366
Query: 379 HPYYGIEACNEVLEG-HL-SGIGPMLRHECLCI--RAALLLKRKWKNDAQMAIRDCYNAR 434
AC + + L S H + RAA +KRKW D A+RDC A
Sbjct: 367 QQANEAFACQQWTQAIQLYSKAVQRAPHNAMLYGNRAAAYMKRKWDGDHYDALRDCLKAI 426
Query: 435 RIDSSSFRAHLYMSEALEQLCKYKEALDFAIAAQCLDPSNSVMAEKVEN 483
++ +AH ++ L +L KY A A +CLD E+ +
Sbjct: 427 SLNPCHLKAHFRLARCLFEL-KY-----VAEALECLDDFKGKFPEQAHS 469
Score = 299 (110.3 bits), Expect = 1.3e-64, Sum P(2) = 1.3e-64
Identities = 68/179 (37%), Positives = 95/179 (53%)
Query: 552 HTSVPGDEGRDVEANFLHGSLNVRIHRRGDSARETVDANXXXXXXXXXXQNDRIPYQPET 611
H+S GRD+ A S N ++G V D + + E
Sbjct: 468 HSSACDALGRDITAALF--SKNDGEEKKGPGGGAPV--RLRSTSRKDSISEDEMVLR-ER 522
Query: 612 VIDMKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAV 671
D + RY GHCN TDIK+A+F G YI SGSDDG +FIWEK+T L+++L GDE++
Sbjct: 523 SYDYQFRYCGHCNTTTDIKEANFFGSNAQYIVSGSDDGSFFIWEKETTNLVRVLQGDESI 582
Query: 672 VNCVQCHPFDCVVATSGIDNTIKIWTPSASVPSIVSGGAAGPDTADVLEAMESNQRKLS 730
VNC+Q HP C +ATSGID +++W P P S G D+ A ++NQR+++
Sbjct: 583 VNCLQPHPSYCFLATSGIDPVVRLWNPR---PE--SEDLTGRVVEDMEGASQANQRRMN 636
>UNIPROTKB|E2RA21 [details] [associations]
symbol:WDTC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0055082 "cellular chemical homeostasis"
evidence=IEA] [GO:0045717 "negative regulation of fatty acid
biosynthetic process" evidence=IEA] [GO:0042826 "histone
deacetylase binding" evidence=IEA] [GO:0042393 "histone binding"
evidence=IEA] [GO:0035264 "multicellular organism growth"
evidence=IEA] [GO:0032869 "cellular response to insulin stimulus"
evidence=IEA] [GO:0008361 "regulation of cell size" evidence=IEA]
[GO:0006006 "glucose metabolic process" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0004857 "enzyme inhibitor activity" evidence=IEA] [GO:0001701
"in utero embryonic development" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50293 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0032869 GO:GO:0004857 GO:GO:0001701
GO:GO:0006006 GO:GO:0008361 GO:GO:0000122 GO:GO:0045717
Gene3D:1.25.40.10 GO:GO:0035264 InterPro:IPR013105 Pfam:PF07719
GeneTree:ENSGT00530000062951 OMA:HRYCGHC GO:GO:0055082
EMBL:AAEX03001717 ProteinModelPortal:E2RA21
Ensembl:ENSCAFT00000019377 Uniprot:E2RA21
Length = 679
Score = 427 (155.4 bits), Expect = 1.4e-64, Sum P(2) = 1.4e-64
Identities = 140/469 (29%), Positives = 210/469 (44%)
Query: 37 VRRLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANV 96
+RRL E EL+GH GCVN + WN KG LL SGSDD H VW K L S+ TGH+AN+
Sbjct: 34 IRRLGLEAELQGHSGCVNCLEWNEKGDLLASGSDDQHTIVWDPLHHKKLLSMHTGHTANI 93
Query: 97 FCTKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVE 156
F KF+P D ++++GA D++V + +L+ + + ++ HT RVK++A
Sbjct: 94 FSVKFLPHAGDRILITGAADSKVHVHDLT------VKETI----HMFGDHTNRVKRIATA 143
Query: 157 VGNPHVVWSASEDGTLRQHDFRQGSSCPPAGSSHQECRNILLDLR--CGA---KRSLADP 211
P+ WSA+EDG +RQ+D R+ S H E +L+DL CG + L
Sbjct: 144 PMWPNTFWSAAEDGLIRQYDLRENSK-------HSE---VLIDLTEYCGQLVEAKCLTVN 193
Query: 212 PKQTLSLKSCDISSTRPHLLLVGGSDAFARLYDRRMLPPL---TSCQKRMS-PPPCVNYF 267
P+ L + ++ P + L + P T C ++ P Y+
Sbjct: 194 PQDNNCLA---VGASGPFVRLYDIRMIHNHRKSMKQSPSAGVHTFCDRQKPLPDGAAQYY 250
Query: 268 C----PMHLSEHGRSS--LHLTHVTFSPNGEEVLLSYSGEHVYLMDVNHAGGRAMRYTVG 321
P+ L ++ L T+VTFSPNG E+L++ GE VYL D+ + + YT
Sbjct: 251 VAGHLPVKLPDYNNRLRVLVATYVTFSPNGTELLVNMGGEQVYLFDLTY---KQRPYTFL 307
Query: 322 DASKIMSFTPTLNGLELQPPIHDFLQTNIRVRGE---VATGLGKCRMLVEIARNSLEEGK 378
K S NG + + + + + + G VE+ LE K
Sbjct: 308 LPRKCHSSGEVQNGKMSTNGVSNGVSNGLHLHSNGFRLPENRGHVSPQVELPPY-LERVK 366
Query: 379 HPYYGIEACNEVLEG-HL-SGIGPMLRHECLCI--RAALLLKRKWKNDAQMAIRDCYNAR 434
AC + + L S H + RAA +KRKW D A+RDC A
Sbjct: 367 QQANEAFACQQWTQAIQLYSKAVQRAPHNAMLYGNRAAAYMKRKWDGDHYDALRDCLKAI 426
Query: 435 RIDSSSFRAHLYMSEALEQLCKYKEALDFAIAAQCLDPSNSVMAEKVEN 483
++ +AH ++ L +L KY A A +CLD E+ +
Sbjct: 427 SLNPCHLKAHFRLARCLFEL-KY-----VAEALECLDDFKGKFPEQAHS 469
Score = 299 (110.3 bits), Expect = 1.4e-64, Sum P(2) = 1.4e-64
Identities = 67/179 (37%), Positives = 94/179 (52%)
Query: 552 HTSVPGDEGRDVEANFLHGSLNVRIHRRGDSARETVDANXXXXXXXXXXQNDRIPYQPET 611
H+S GRD+ A S N ++G D + + E
Sbjct: 468 HSSACDALGRDITAALF--SKNDGEEKKGAGGGGGGPVRLRSTSRKDSISEDEMVLR-ER 524
Query: 612 VIDMKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAV 671
D + RY GHCN TDIK+A+F G YI SGSDDG +FIWEK+T L+++L GDE++
Sbjct: 525 SYDYQFRYCGHCNTTTDIKEANFFGSNAQYIVSGSDDGSFFIWEKETTNLVRVLQGDESI 584
Query: 672 VNCVQCHPFDCVVATSGIDNTIKIWTPSASVPSIVSGGAAGPDTADVLEAMESNQRKLS 730
VNC+Q HP C +ATSGID +++W P P S G D+ A ++NQR+++
Sbjct: 585 VNCLQPHPSYCFLATSGIDPVVRLWNPR---PE--SEDLTGRVVEDMEGASQANQRRMN 638
>MGI|MGI:2685541 [details] [associations]
symbol:Wdtc1 "WD and tetratricopeptide repeats 1"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0001701 "in utero embryonic development" evidence=IMP]
[GO:0004857 "enzyme inhibitor activity" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006006 "glucose metabolic process" evidence=IMP] [GO:0008361
"regulation of cell size" evidence=IMP] [GO:0032869 "cellular
response to insulin stimulus" evidence=IMP] [GO:0035264
"multicellular organism growth" evidence=IMP] [GO:0042393 "histone
binding" evidence=IPI] [GO:0042826 "histone deacetylase binding"
evidence=IPI] [GO:0043086 "negative regulation of catalytic
activity" evidence=IDA] [GO:0045717 "negative regulation of fatty
acid biosynthetic process" evidence=IMP;IDA] [GO:0055082 "cellular
chemical homeostasis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50005 PROSITE:PS50082
PROSITE:PS50293 PROSITE:PS50294 SMART:SM00320 MGI:MGI:2685541
GO:GO:0005829 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0032869 GO:GO:0004857 eggNOG:COG2319
GO:GO:0001701 GO:GO:0006006 GO:GO:0008361 GO:GO:0000122
GO:GO:0045717 Gene3D:1.25.40.10 GO:GO:0035264 InterPro:IPR013105
Pfam:PF07719 GeneTree:ENSGT00530000062951 CTD:23038
HOGENOM:HOG000231334 HOVERGEN:HBG059105 KO:K11807 OMA:HRYCGHC
OrthoDB:EOG4CRKZJ ChiTaRS:WDTC1 GO:GO:0055082 EMBL:BC048824
EMBL:BC057107 IPI:IPI00108450 RefSeq:NP_955010.1 UniGene:Mm.226576
ProteinModelPortal:Q80ZK9 SMR:Q80ZK9 STRING:Q80ZK9
PhosphoSite:Q80ZK9 PaxDb:Q80ZK9 PRIDE:Q80ZK9
Ensembl:ENSMUST00000043305 GeneID:230796 KEGG:mmu:230796
InParanoid:Q80ZK9 NextBio:380168 Bgee:Q80ZK9 CleanEx:MM_WDTC1
Genevestigator:Q80ZK9 GermOnline:ENSMUSG00000037622 Uniprot:Q80ZK9
Length = 677
Score = 375 (137.1 bits), Expect = 1.9e-64, Sum P(3) = 1.9e-64
Identities = 100/290 (34%), Positives = 148/290 (51%)
Query: 37 VRRLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANV 96
+RRL E EL+GH GCVN + WN KG LL SGSDD H VW K L S+ TGH+AN+
Sbjct: 34 IRRLGLEAELQGHSGCVNCLEWNEKGDLLASGSDDQHTIVWDPLHHKKLLSMHTGHTANI 93
Query: 97 FCTKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVE 156
F KF+P D ++++GA D++V + +L+ + + ++ HT RVK++A
Sbjct: 94 FSVKFLPHAGDRILITGAADSKVHVHDLT------VKETI----HMFGDHTNRVKRIATA 143
Query: 157 VGNPHVVWSASEDGTLRQHDFRQGSSCPPAGSSHQECRNILLDLR--CGAK---RSLADP 211
P+ WSA+EDG +RQ+D R+ S H E +L+DL CG + L
Sbjct: 144 PMWPNTFWSAAEDGLIRQYDLRENSK-------HSE---VLIDLTEYCGPMVEAKCLTVN 193
Query: 212 PKQTLSLKSCDISSTRPHLLLVGGSDAFARLYDRRMLPPL---TSCQKRMS-PPPCVNYF 267
P+ L + ++ P + L R P T C ++ P Y+
Sbjct: 194 PQDNNCLA---VGASGPFVRLYDIRMIHNHRKSMRQSPSAGVHTFCDRQKPLPDGAAQYY 250
Query: 268 C----PMHLSEHGRSSLHL---THVTFSPNGEEVLLSYSGEHVYLMDVNH 310
P+ L ++ S L + T+VTFSPNG E+L++ GE VYL D+ +
Sbjct: 251 VAGHLPVKLPDYN-SRLRVLVATYVTFSPNGTELLVNMGGEQVYLFDLTY 299
Score = 302 (111.4 bits), Expect = 1.9e-64, Sum P(3) = 1.9e-64
Identities = 58/123 (47%), Positives = 79/123 (64%)
Query: 610 ETVIDMKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDE 669
E D + RY GHCN TDIK+A+F G YI SGSDDG +FIWEK+T L+++L GDE
Sbjct: 521 ERSYDYQFRYCGHCNTTTDIKEANFFGSNAQYIVSGSDDGSFFIWEKETTNLVRVLQGDE 580
Query: 670 AVVNCVQCHPFDCVVATSGIDNTIKIWTPSASVPSIVSGGAAGPDTADVLEAMESNQRKL 729
++VNC+Q HP C +ATSGID +++W P P S G D+ A ++NQR++
Sbjct: 581 SIVNCLQPHPSYCFLATSGIDPVVRLWNPR---PE--SEDLTGRVVEDMEGASQANQRRM 635
Query: 730 SRN 732
+ N
Sbjct: 636 NAN 638
Score = 96 (38.9 bits), Expect = 1.9e-64, Sum P(3) = 1.9e-64
Identities = 25/74 (33%), Positives = 36/74 (48%)
Query: 410 RAALLLKRKWKNDAQMAIRDCYNARRIDSSSFRAHLYMSEALEQLCKYKEALDFAIAAQC 469
RAA +KRKW D A+RDC A ++ +AH ++ L +L KY A A +C
Sbjct: 401 RAAAYMKRKWDGDHYDALRDCLKAISLNPCHLKAHFRLARCLFEL-KY-----VAEALEC 454
Query: 470 LDPSNSVMAEKVEN 483
LD E+ +
Sbjct: 455 LDDFKGKFPEQAHS 468
Score = 50 (22.7 bits), Expect = 8.3e-24, Sum P(2) = 8.3e-24
Identities = 24/91 (26%), Positives = 36/91 (39%)
Query: 214 QTLSLKSCDISSTRPHLLLVGGSDAFA---RLYDRRMLPPLTSCQKRMSPPPCVNYFCPM 270
Q + L S + PH ++ G+ A A R +D L C K +S PC
Sbjct: 379 QAIQLYSQAVQKA-PHNAMLYGNRAAAYMKRKWDGDHYDALRDCLKAISLNPC------- 430
Query: 271 HLSEHGRSSLHLTHVTFSPNGEEVLLSYSGE 301
HL H R + L + + E L + G+
Sbjct: 431 HLKAHFRLARCLFELKYVAEALECLDDFKGK 461
Score = 46 (21.3 bits), Expect = 4.4e-29, Sum P(3) = 4.4e-29
Identities = 33/132 (25%), Positives = 55/132 (41%)
Query: 285 VTFSPNGEEVLLS-YSGEHVYLMDVN---HAGGRAMRYTVGDASKIMSFTPTLNGLELQP 340
+ + P + LLS ++G + V HAG R + D SK+ ++ L ++
Sbjct: 72 IVWDPLHHKKLLSMHTGHTANIFSVKFLPHAGDRILITGAAD-SKVH-----VHDLTVKE 125
Query: 341 PIHDFLQTNIRVRGEVATGLGKCRMLVEIARNSLEEGKHPYYGIEACN---EVLEGHLSG 397
IH F RV+ +AT M ++ E+G Y + + EVL
Sbjct: 126 TIHMFGDHTNRVK-RIATA----PMWPNTFWSAAEDGLIRQYDLRENSKHSEVLIDLTEY 180
Query: 398 IGPMLRHECLCI 409
GPM+ +CL +
Sbjct: 181 CGPMVEAKCLTV 192
Score = 38 (18.4 bits), Expect = 6.7e-37, Sum P(3) = 6.7e-37
Identities = 16/65 (24%), Positives = 22/65 (33%)
Query: 676 QCHPFDCVVATSGIDNTIKIWTPSASVPSIVSGGAAGPDTADVLEAMESNQRKLSRNREH 735
Q H C G D T +++ S +GG GP +S RE
Sbjct: 465 QAHSSACDAL--GRDITAALFSKSDGEEKKAAGGGGGPVRLRSTSRKDSISEDEMVLRER 522
Query: 736 SLSYE 740
S Y+
Sbjct: 523 SYDYQ 527
>UNIPROTKB|B6CVL4 [details] [associations]
symbol:WDTC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0055082 "cellular chemical homeostasis" evidence=IEA]
[GO:0045717 "negative regulation of fatty acid biosynthetic
process" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0035264 "multicellular organism growth" evidence=IEA]
[GO:0032869 "cellular response to insulin stimulus" evidence=IEA]
[GO:0008361 "regulation of cell size" evidence=IEA] [GO:0006006
"glucose metabolic process" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004857
"enzyme inhibitor activity" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50293 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0032869 GO:GO:0004857 eggNOG:COG2319
GO:GO:0001701 GO:GO:0006006 GO:GO:0008361 GO:GO:0000122
GO:GO:0045717 Gene3D:1.25.40.10 GO:GO:0035264 InterPro:IPR013105
Pfam:PF07719 GeneTree:ENSGT00530000062951 CTD:23038
HOGENOM:HOG000231334 HOVERGEN:HBG059105 KO:K11807 OMA:HRYCGHC
OrthoDB:EOG4CRKZJ GO:GO:0055082 EMBL:CU466983 EMBL:FP067355
EMBL:EU559626 RefSeq:NP_001129436.1 UniGene:Ssc.11356
ProteinModelPortal:B6CVL4 STRING:B6CVL4 Ensembl:ENSSSCT00000003964
GeneID:100190994 KEGG:ssc:100190994 Uniprot:B6CVL4
Length = 678
Score = 427 (155.4 bits), Expect = 2.2e-64, Sum P(2) = 2.2e-64
Identities = 140/469 (29%), Positives = 210/469 (44%)
Query: 37 VRRLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANV 96
+RRL E EL+GH GCVN + WN KG LL SGSDD H VW K L S+ TGH+AN+
Sbjct: 34 IRRLGLEAELQGHSGCVNCLEWNEKGDLLASGSDDQHTIVWDPLHHKKLLSMHTGHTANI 93
Query: 97 FCTKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVE 156
F KF+P D ++++GA D++V + +L+ + + ++ HT RVK++A
Sbjct: 94 FSVKFLPHAGDRILITGAADSKVHVHDLT------VKETI----HMFGDHTNRVKRIATA 143
Query: 157 VGNPHVVWSASEDGTLRQHDFRQGSSCPPAGSSHQECRNILLDLR--CGA---KRSLADP 211
P+ WSA+EDG +RQ+D R+ S H E +L+DL CG + L
Sbjct: 144 PMWPNTFWSAAEDGLIRQYDLRENSK-------HSE---VLIDLTEYCGQLVEAKCLTVN 193
Query: 212 PKQTLSLKSCDISSTRPHLLLVGGSDAFARLYDRRMLPPL---TSCQKRMS-PPPCVNYF 267
P+ L + ++ P + L + P T C ++ P Y+
Sbjct: 194 PQDNNCLA---VGASGPFVRLYDIRMIHNHRKSMKQSPSAGVHTFCDRQKPLPDGAAQYY 250
Query: 268 C----PMHLSEHGRSS--LHLTHVTFSPNGEEVLLSYSGEHVYLMDVNHAGGRAMRYTVG 321
P+ L ++ L T+VTFSPNG E+L++ GE VYL D+ + + YT
Sbjct: 251 VAGHLPVKLPDYNNRLRVLVATYVTFSPNGTELLVNMGGEQVYLFDLTY---KQRPYTFL 307
Query: 322 DASKIMSFTPTLNGLELQPPIHDFLQTNIRVRGE---VATGLGKCRMLVEIARNSLEEGK 378
K S NG + + + + + + G VE+ LE K
Sbjct: 308 LPRKCHSSGEVQNGKMSTNGVSNGVSNGLHLHSNGFRLPESRGHVSPQVELPPY-LERVK 366
Query: 379 HPYYGIEACNEVLEG-HL-SGIGPMLRHECLCI--RAALLLKRKWKNDAQMAIRDCYNAR 434
AC + + L S H + RAA +KRKW D A+RDC A
Sbjct: 367 QQANEAFACQQWTQAIQLYSKAVQRAPHNAMLYGNRAAAYMKRKWDGDHYDALRDCLKAI 426
Query: 435 RIDSSSFRAHLYMSEALEQLCKYKEALDFAIAAQCLDPSNSVMAEKVEN 483
++ +AH ++ L +L KY A A +CLD E+ +
Sbjct: 427 SLNPCHLKAHFRLARCLFEL-KY-----VAEALECLDDFKGKFPEQAHS 469
Score = 297 (109.6 bits), Expect = 2.2e-64, Sum P(2) = 2.2e-64
Identities = 57/121 (47%), Positives = 78/121 (64%)
Query: 610 ETVIDMKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDE 669
E D + RY GHCN TDIK+A+F G YI SGSDDG +FIWEK+T L+++L GDE
Sbjct: 522 ERSYDYQFRYCGHCNTTTDIKEANFFGSNAQYIVSGSDDGSFFIWEKETTNLVRVLQGDE 581
Query: 670 AVVNCVQCHPFDCVVATSGIDNTIKIWTPSASVPSIVSGGAAGPDTADVLEAMESNQRKL 729
++VNC+Q HP C +ATSGID +++W P P S G D+ A ++NQR++
Sbjct: 582 SIVNCLQPHPSYCFLATSGIDPVVRLWNPR---PE--SEDLTGRVVEDMEGASQANQRRM 636
Query: 730 S 730
+
Sbjct: 637 N 637
>RGD|1310362 [details] [associations]
symbol:Wdtc1 "WD and tetratricopeptide repeats 1" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0001701 "in utero embryonic development" evidence=IEA;ISO]
[GO:0004857 "enzyme inhibitor activity" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IEA;ISO] [GO:0006006 "glucose metabolic process"
evidence=IEA;ISO] [GO:0008361 "regulation of cell size"
evidence=IEA;ISO] [GO:0032869 "cellular response to insulin
stimulus" evidence=IEA;ISO] [GO:0035264 "multicellular organism
growth" evidence=IEA;ISO] [GO:0042393 "histone binding"
evidence=IEA;ISO] [GO:0042826 "histone deacetylase binding"
evidence=IEA;ISO] [GO:0043086 "negative regulation of catalytic
activity" evidence=ISO] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=ISO] [GO:0045717 "negative regulation of fatty
acid biosynthetic process" evidence=IEA;ISO] [GO:0055082 "cellular
chemical homeostasis" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50293
PROSITE:PS50294 SMART:SM00320 RGD:1310362 GO:GO:0005829
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0032869
GO:GO:0004857 GO:GO:0001701 GO:GO:0006006 GO:GO:0008361
GO:GO:0000122 GO:GO:0045717 Gene3D:1.25.40.10 GO:GO:0035264
InterPro:IPR013105 Pfam:PF07719 GeneTree:ENSGT00530000062951
EMBL:CH473968 CTD:23038 KO:K11807 OMA:HRYCGHC OrthoDB:EOG4CRKZJ
GO:GO:0055082 IPI:IPI00366746 RefSeq:NP_001101378.1
UniGene:Rn.16646 Ensembl:ENSRNOT00000011311 GeneID:313020
KEGG:rno:313020 UCSC:RGD:1310362 NextBio:665469 Uniprot:D4A7Z0
Length = 676
Score = 372 (136.0 bits), Expect = 4.3e-64, Sum P(3) = 4.3e-64
Identities = 99/290 (34%), Positives = 148/290 (51%)
Query: 37 VRRLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANV 96
+RRL E EL+GH GCVN + WN KG LL SGSDD H VW K L S+ TGH+AN+
Sbjct: 34 IRRLGLEAELQGHSGCVNCLEWNEKGDLLASGSDDQHTIVWDPLHHKKLLSMHTGHTANI 93
Query: 97 FCTKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVE 156
F KF+P D ++++GA D++V + +L+ + + ++ HT RVK++A
Sbjct: 94 FSVKFLPHAGDRILITGAADSKVHVHDLT------VKETI----HMFGDHTNRVKRIATA 143
Query: 157 VGNPHVVWSASEDGTLRQHDFRQGSSCPPAGSSHQECRNILLDLR--CGAK---RSLADP 211
P+ WSA+EDG +RQ+D R+ S H E +L+DL CG + L
Sbjct: 144 PMWPNTFWSAAEDGLIRQYDLRENSK-------HSE---VLIDLTEYCGPMVEAKCLTVN 193
Query: 212 PKQTLSLKSCDISSTRPHLLLVGGSDAFARLYDRRMLPPL---TSCQKRMS-PPPCVNYF 267
P+ L + ++ P + L + P T C ++ P Y+
Sbjct: 194 PQDNNCLA---VGASGPFVRLYDIRMIHNHRKSMKQSPSAGVHTFCDRQKPLPDGAAQYY 250
Query: 268 C----PMHLSEHGRSSLHL---THVTFSPNGEEVLLSYSGEHVYLMDVNH 310
P+ L ++ S L + T+VTFSPNG E+L++ GE VYL D+ +
Sbjct: 251 VAGHLPVKLPDYN-SRLRVLVATYVTFSPNGTELLVNMGGEQVYLFDLTY 299
Score = 302 (111.4 bits), Expect = 4.3e-64, Sum P(3) = 4.3e-64
Identities = 58/123 (47%), Positives = 79/123 (64%)
Query: 610 ETVIDMKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDE 669
E D + RY GHCN TDIK+A+F G YI SGSDDG +FIWEK+T L+++L GDE
Sbjct: 520 ERSYDYQFRYCGHCNTTTDIKEANFFGSNAQYIVSGSDDGSFFIWEKETTNLVRVLQGDE 579
Query: 670 AVVNCVQCHPFDCVVATSGIDNTIKIWTPSASVPSIVSGGAAGPDTADVLEAMESNQRKL 729
++VNC+Q HP C +ATSGID +++W P P S G D+ A ++NQR++
Sbjct: 580 SIVNCLQPHPSYCFLATSGIDPVVRLWNPR---PE--SEDLTGRVVEDMEGASQANQRRM 634
Query: 730 SRN 732
+ N
Sbjct: 635 NAN 637
Score = 96 (38.9 bits), Expect = 4.3e-64, Sum P(3) = 4.3e-64
Identities = 25/74 (33%), Positives = 36/74 (48%)
Query: 410 RAALLLKRKWKNDAQMAIRDCYNARRIDSSSFRAHLYMSEALEQLCKYKEALDFAIAAQC 469
RAA +KRKW D A+RDC A ++ +AH ++ L +L KY A A +C
Sbjct: 401 RAAAYMKRKWDGDHYDALRDCLKAISLNPCHLKAHFRLARCLFEL-KY-----VAEALEC 454
Query: 470 LDPSNSVMAEKVEN 483
LD E+ +
Sbjct: 455 LDDFKGKFPEQAHS 468
Score = 50 (22.7 bits), Expect = 8.3e-24, Sum P(2) = 8.3e-24
Identities = 24/91 (26%), Positives = 36/91 (39%)
Query: 214 QTLSLKSCDISSTRPHLLLVGGSDAFA---RLYDRRMLPPLTSCQKRMSPPPCVNYFCPM 270
Q + L S + PH ++ G+ A A R +D L C K +S PC
Sbjct: 379 QAIQLYSKAVQKA-PHNAMLYGNRAAAYMKRKWDGDHYDALRDCLKAISLNPC------- 430
Query: 271 HLSEHGRSSLHLTHVTFSPNGEEVLLSYSGE 301
HL H R + L + + E L + G+
Sbjct: 431 HLKAHFRLARCLFELKYVAEALECLDDFKGK 461
Score = 46 (21.3 bits), Expect = 4.4e-29, Sum P(3) = 4.4e-29
Identities = 33/132 (25%), Positives = 55/132 (41%)
Query: 285 VTFSPNGEEVLLS-YSGEHVYLMDVN---HAGGRAMRYTVGDASKIMSFTPTLNGLELQP 340
+ + P + LLS ++G + V HAG R + D SK+ ++ L ++
Sbjct: 72 IVWDPLHHKKLLSMHTGHTANIFSVKFLPHAGDRILITGAAD-SKVH-----VHDLTVKE 125
Query: 341 PIHDFLQTNIRVRGEVATGLGKCRMLVEIARNSLEEGKHPYYGIEACN---EVLEGHLSG 397
IH F RV+ +AT M ++ E+G Y + + EVL
Sbjct: 126 TIHMFGDHTNRVK-RIATA----PMWPNTFWSAAEDGLIRQYDLRENSKHSEVLIDLTEY 180
Query: 398 IGPMLRHECLCI 409
GPM+ +CL +
Sbjct: 181 CGPMVEAKCLTV 192
>UNIPROTKB|E1C4X5 [details] [associations]
symbol:WDTC1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0004857 "enzyme inhibitor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0006006 "glucose metabolic
process" evidence=IEA] [GO:0008361 "regulation of cell size"
evidence=IEA] [GO:0032869 "cellular response to insulin stimulus"
evidence=IEA] [GO:0035264 "multicellular organism growth"
evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0045717
"negative regulation of fatty acid biosynthetic process"
evidence=IEA] [GO:0055082 "cellular chemical homeostasis"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50293 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0032869 GO:GO:0004857 GO:GO:0006006
GO:GO:0008361 GO:GO:0000122 GO:GO:0045717 Gene3D:1.25.40.10
GeneTree:ENSGT00530000062951 OMA:HRYCGHC GO:GO:0055082
EMBL:AADN02051275 IPI:IPI00603574 ProteinModelPortal:E1C4X5
PRIDE:E1C4X5 Ensembl:ENSGALT00000001392 NextBio:20822612
Uniprot:E1C4X5
Length = 671
Score = 363 (132.8 bits), Expect = 1.0e-62, Sum P(3) = 1.0e-62
Identities = 93/284 (32%), Positives = 143/284 (50%)
Query: 37 VRRLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANV 96
+RRL E EL+GH GCVN + WN KG LL SGSDD H VW K L S+ TGH+AN+
Sbjct: 34 IRRLGLEAELQGHSGCVNCLEWNEKGDLLASGSDDQHTIVWDPLHHKKLLSMHTGHTANI 93
Query: 97 FCTKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVE 156
F KF+P + D ++++GA D++V + +L+ + + ++ HT RVK++A
Sbjct: 94 FSVKFLPHSGDRILITGAADSKVHVHDLT------VKETI----HMFGDHTNRVKRIATA 143
Query: 157 VGNPHVVWSASEDGTLRQHDFRQGSSCPPAGSSHQECRNILLDLRCGAKRSLADPPKQTL 216
P+ WSA+EDG +RQ+D R+ S E L++ +C L P+
Sbjct: 144 PMWPNTFWSAAEDGLIRQYDLRENSKRSEVLIDLTEYCGQLVEAKC-----LTVNPQDNN 198
Query: 217 SLKSCDISSTRPHLLLVGGSDAFARLYDRRMLPPL---TSCQKRMS-PPPCVNYFC---- 268
L + ++ P + L + P T C ++ P Y+
Sbjct: 199 YLA---VGASGPFVRLYDIRMIHNHRKSMKQCPSAGVHTFCDRQKPLPDGAAQYYVAGHL 255
Query: 269 PMHLSEHGRSS--LHLTHVTFSPNGEEVLLSYSGEHVYLMDVNH 310
P+ L ++ L T+VTFSP+G E+L++ GE VYL D+ +
Sbjct: 256 PVKLPDYNNRLRVLVATYVTFSPDGTELLVNMGGEQVYLFDLTY 299
Score = 299 (110.3 bits), Expect = 1.0e-62, Sum P(3) = 1.0e-62
Identities = 56/121 (46%), Positives = 78/121 (64%)
Query: 610 ETVIDMKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDE 669
E D K RY GHCN TDIK+A+F G YI SGSDDG +FIWEK+T L+++L GDE
Sbjct: 515 ERSYDYKFRYCGHCNTTTDIKEANFFGSNAQYIVSGSDDGSFFIWEKETTNLVRVLQGDE 574
Query: 670 AVVNCVQCHPFDCVVATSGIDNTIKIWTPSASVPSIVSGGAAGPDTADVLEAMESNQRKL 729
++VNC+Q HP C +ATSGID +++W P ++ G D+ A ++NQR++
Sbjct: 575 SIVNCLQPHPSYCFLATSGIDPVVRLWNPRPESETL-----NGRVVVDMEGASQANQRRM 629
Query: 730 S 730
+
Sbjct: 630 N 630
Score = 96 (38.9 bits), Expect = 1.0e-62, Sum P(3) = 1.0e-62
Identities = 25/74 (33%), Positives = 36/74 (48%)
Query: 410 RAALLLKRKWKNDAQMAIRDCYNARRIDSSSFRAHLYMSEALEQLCKYKEALDFAIAAQC 469
RAA +KRKW D A+RDC A ++ +AH ++ L +L KY A A +C
Sbjct: 398 RAAAYMKRKWDGDHYDALRDCLKAISLNPCHLKAHFRLARCLFEL-KY-----VAEALEC 451
Query: 470 LDPSNSVMAEKVEN 483
LD E+ +
Sbjct: 452 LDDFKGKFPEQAHS 465
Score = 46 (21.3 bits), Expect = 4.5e-23, Sum P(2) = 4.5e-23
Identities = 22/90 (24%), Positives = 33/90 (36%)
Query: 214 QTLSLKSCDISSTRPHLLLVGGSDA--FARLYDRRMLPPLTSCQKRMSPPPCVNYFCPMH 271
Q + L S + + +L G A R +D L C K +S PC H
Sbjct: 376 QAIQLYSKAVQKAPNNAMLYGNRAAAYMKRKWDGDHYDALRDCLKAISLNPC-------H 428
Query: 272 LSEHGRSSLHLTHVTFSPNGEEVLLSYSGE 301
L H R + L + + E L + G+
Sbjct: 429 LKAHFRLARCLFELKYVAEALECLDDFKGK 458
Score = 40 (19.1 bits), Expect = 1.1e-35, Sum P(3) = 1.1e-35
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 702 VPSIVSGGAAGPDTADVLE 720
+ + SGGA G D D E
Sbjct: 645 ITGLTSGGAGGSDDEDSSE 663
>FB|FBgn0000057 [details] [associations]
symbol:adp "adipose" species:7227 "Drosophila melanogaster"
[GO:0005975 "carbohydrate metabolic process" evidence=TAS]
[GO:0006629 "lipid metabolic process" evidence=IMP;TAS] [GO:0009269
"response to desiccation" evidence=IMP] [GO:0010891 "negative
regulation of sequestering of triglyceride" evidence=IMP]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0010883 "regulation of lipid
storage" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR015943
InterPro:IPR019734 Pfam:PF00400 PROSITE:PS50005 PROSITE:PS50082
PROSITE:PS50293 PROSITE:PS50294 SMART:SM00028 SMART:SM00320
EMBL:AE013599 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005975 GO:GO:0006629 GO:GO:0010891
Gene3D:1.25.40.10 InterPro:IPR013105 Pfam:PF07719 GO:GO:0009269
GeneTree:ENSGT00530000062951 KO:K11807 OMA:HRYCGHC EMBL:BT133245
EMBL:AJ556168 RefSeq:NP_611296.2 UniGene:Dm.681 SMR:Q7K7W5
STRING:Q7K7W5 EnsemblMetazoa:FBtr0086744 GeneID:37073
KEGG:dme:Dmel_CG5124 UCSC:CG5124-RA CTD:37073 FlyBase:FBgn0000057
InParanoid:Q7K7W5 OrthoDB:EOG4280GR GenomeRNAi:37073 NextBio:801825
Uniprot:Q7K7W5
Length = 628
Score = 312 (114.9 bits), Expect = 1.7e-57, Sum P(3) = 1.7e-57
Identities = 61/120 (50%), Positives = 81/120 (67%)
Query: 611 TVIDMKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEA 670
T D QRYVGHCNV TDIK+A++LG +G++IA+GSDDG +IWE TG++ + D A
Sbjct: 498 TARDYMQRYVGHCNVTTDIKEANYLGSQGEFIAAGSDDGNMYIWEGDTGKIRAVYRADSA 557
Query: 671 VVNCVQCHPFDCVVATSGIDNTIKIWTPSASVPSIVSGGAAGPD-TADVLEAMESNQRKL 729
+VNCVQ HP C++ATSGID+ IKIW+P A+ P+ ADV +E NQ K+
Sbjct: 558 IVNCVQPHPSICMLATSGIDHNIKIWSPCAA------SAEERPNLVADVTRFVEDNQEKM 611
Score = 297 (109.6 bits), Expect = 1.7e-57, Sum P(3) = 1.7e-57
Identities = 66/179 (36%), Positives = 94/179 (52%)
Query: 37 VRRLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANV 96
V RL QE L GH+GCVN + W + G L SGSDD + +W +KL+H I T H NV
Sbjct: 54 VDRLEQEAVLVGHEGCVNCLEWTTDGMWLASGSDDYRVMIWDPFRKKLVHVIRTKHLGNV 113
Query: 97 FCTKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVE 156
F KF+P+T++ +V + A D + +++++ D N S + CH R K+LA
Sbjct: 114 FSVKFLPKTNNSIVATCAADKFIYVYDIN-------DPNETLFSCI--CHFSRAKRLATA 164
Query: 157 VGNPHVVWSASEDGTLRQHDFRQGSSCPPAGSSHQECRNILLDLRCGAKRSLADPPKQT 215
+PHV WSA EDG + Q D R+ C P N+ L + LA P++T
Sbjct: 165 QDSPHVFWSAGEDGCILQLDIREPHRCRPEEGIGVRLLNLHDQLENTEAKCLAINPRRT 223
Score = 230 (86.0 bits), Expect = 1.7e-50, Sum P(3) = 1.7e-50
Identities = 63/172 (36%), Positives = 89/172 (51%)
Query: 145 CHTRRVKKLAVEVGNPHVVWSASEDGTLRQHDFRQGSSCPPAGSSHQECRNILLDLRCGA 204
CH R K+LA +PHV WSA EDG + Q D R+ C P +E + L
Sbjct: 153 CHFSRAKRLATAQDSPHVFWSAGEDGCILQLDIREPHRCRP-----EEGIGVRL------ 201
Query: 205 KRSLADPPKQTLSLKSCDISSTRPHLLLVGGSDAFARLYDRRMLPPLTSCQKRMSPPPCV 264
+L D + T K I+ R L VG +D FAR+YDRR LP +S CV
Sbjct: 202 -LNLHDQLENT-EAKCLAINPRRTEYLAVGTNDPFARVYDRRKLPSTNG--NGLSA--CV 255
Query: 265 NYFCPMHLSEH-GRSSLH----LTHVTFSPNGEEVLLSYSGEHVYLMDVNHA 311
Y+ P + ++ R+ +H +T++TF+ NG E+L++ EHVY D+NHA
Sbjct: 256 AYYAPGQIVKNISRNIVHEPRGITYLTFNGNGTELLVNIGCEHVYRFDLNHA 307
Score = 104 (41.7 bits), Expect = 1.7e-57, Sum P(3) = 1.7e-57
Identities = 22/73 (30%), Positives = 42/73 (57%)
Query: 389 EVLEGHLSGIGPMLRHECLCI-RAALLLKRKWKNDAQMAIRDCYNARRIDSSSFRAHLYM 447
+ ++ + + + + E L + RA L++R W D A+RDC+ A R+D S +AH +
Sbjct: 360 DAIDAYSAALAKYPQGEVLYLNRATALMRRGWFGDIYAALRDCHEALRLDPSYVKAHFRL 419
Query: 448 SEALEQLCKYKEA 460
+ AL +L + ++A
Sbjct: 420 ARALLELHRPQDA 432
>POMBASE|SPBC609.03 [details] [associations]
symbol:iqw1 "WD repeat protein, Iqw1" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005829 "cytosol" evidence=IDA] [GO:0008150
"biological_process" evidence=ND] [GO:0043234 "protein complex"
evidence=NAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPBC609.03 GO:GO:0005829 GO:GO:0043234
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:NOG292060 KO:K11795
PIR:T40574 RefSeq:NP_596313.1 ProteinModelPortal:O94527
EnsemblFungi:SPBC609.03.1 GeneID:2541121 KEGG:spo:SPBC609.03
OMA:GHITACK OrthoDB:EOG4T4H3G NextBio:20802234 Uniprot:O94527
Length = 809
Score = 375 (137.1 bits), Expect = 3.4e-49, Sum P(2) = 3.4e-49
Identities = 103/335 (30%), Positives = 169/335 (50%)
Query: 15 LDTRHTDTRPDVNHSLQMHSSLVRRLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHI 74
LD R R ++ + +S+ + + ++EL GH GCVN + W++ G L+SGSDDT +
Sbjct: 11 LDYRDWFQRK-ISRDIYGNSTWLTGIDLQKELTGHTGCVNTLDWSADGEFLLSGSDDTRL 69
Query: 75 NVWS-YSSRKLLHSIETGHSANVFCTKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLD 133
VW ++ K H I TGH N+F KFVP +++ ++S +GD ++LF+L G+D
Sbjct: 70 IVWDVFNEYKPRHLISTGHVQNIFSAKFVPYSNNRQILSASGDKLIKLFDLDSSKEGGMD 129
Query: 134 DNAITPSALYQCHTRRVKKLAVEVGNPHVVWSASEDGTLRQHDFRQGSSCPPAGSSHQEC 193
T + + C VK + V N H SEDGT RQ+D R+ C + +C
Sbjct: 130 HGMETQTRCWSCALDSVKNI-VPCDNGHTFLVCSEDGTARQYDIREPHVC----NQDLDC 184
Query: 194 RNILLDLRCGAKRSLADPPKQTLSLKSCDISSTRPHLLLVGGSDAFARLYDRRMLPPLTS 253
+IL++ +P + ++L + +S + P+ +GG+ +A LYDRRM+
Sbjct: 185 PSILVNY---------NPYR--INLYTITMSPSNPYYFAIGGTHPYAFLYDRRMVKKSFR 233
Query: 254 CQKRMSPPP-----CVNYFCPM-HLSEHGRSSLHLTHVTFSP-NGEEVLLSYSGEHVYLM 306
M+ P CV F P + G ++T FS N E+L+S++ ++VYL
Sbjct: 234 DDWTMNTSPEKDCRCVRKFSPDGSCNSQGILDRYITCCQFSAANPNELLVSWNSDYVYLF 293
Query: 307 DVNHAGGRAMRYT-VGDASKIMSFTPTLNGLELQP 340
V+ + + D++K S P+L L+ QP
Sbjct: 294 HVHEDKSYTPTFNKIEDSNKKPS-KPSL--LQTQP 325
Score = 217 (81.4 bits), Expect = 3.4e-49, Sum P(2) = 3.4e-49
Identities = 49/134 (36%), Positives = 77/134 (57%)
Query: 619 YVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCH 678
Y GHCNV + IK +F GQ +Y+ SGSDDGR+FIW+K ++ ++ GD VN ++ H
Sbjct: 664 YYGHCNVES-IKNVNFYGQNDEYVMSGSDDGRFFIWDKLNASILAIIHGDSEAVNVIEGH 722
Query: 679 PFDCVVATSGIDNTIKIWTPSASVPSIVSGGAAGPDTADVLEAMESNQRKLSRNR---EH 735
P +A SGID+T+KI+ + PS S ++ ++ E N+++ SR+
Sbjct: 723 PRCPTLAVSGIDSTVKIFNTENTPPSGCSRNHTS-NSYKIIATNEMNRQQGSRDSYITSR 781
Query: 736 SLSYELLERFHMHE 749
LS+ L R H+ +
Sbjct: 782 MLSH-LAYRAHLDD 794
>UNIPROTKB|F1NU19 [details] [associations]
symbol:F1NU19 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0030374
"ligand-dependent nuclear receptor transcription coactivator
activity" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0080008 "Cul4-RING ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR000048 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50096 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0045944 GO:GO:0030374 GO:GO:0080008
GeneTree:ENSGT00530000062951 OMA:QTEAIGP EMBL:AADN02032625
EMBL:AADN02032626 EMBL:AADN02042411 EMBL:AADN02042412
EMBL:AADN02042413 EMBL:AADN02042414 EMBL:AADN02042415
EMBL:AADN02042416 EMBL:AADN02042417 EMBL:AADN02032627
EMBL:AADN02032628 EMBL:AADN02032629 EMBL:AADN02032630
EMBL:AADN02032631 EMBL:AADN02032632 EMBL:AADN02032633
EMBL:AADN02032634 IPI:IPI00576626 Ensembl:ENSGALT00000024895
Uniprot:F1NU19
Length = 825
Score = 271 (100.5 bits), Expect = 8.4e-46, Sum P(3) = 8.4e-46
Identities = 65/192 (33%), Positives = 98/192 (51%)
Query: 37 VRRLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANV 96
++RL E L H GCVN I WN G ++SGSDDT++ + + SRK+L +I +GH AN+
Sbjct: 5 IQRLKLEATLNVHDGCVNTICWNDTGEYILSGSDDTNLVITNPYSRKVLTTIRSGHRANI 64
Query: 97 FCTKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVE 156
F KF+P T+D+ +VS +GD + N+ + D Y CH ++
Sbjct: 65 FSAKFLPCTNDKQIVSCSGDGVIFYTNVEQ-------DAETNRQCQYTCHYGTTYEIMTV 117
Query: 157 VGNPHVVWSASEDGTLRQHDFRQGSSCPPAGSSHQECRN-ILLDLRCGAKRSLADPPKQT 215
+P+ S EDGT+R D R +SC + ++C++ IL++ R A PP
Sbjct: 118 PNDPYTFLSCGEDGTVRWFDTRIKTSC-----TKEDCKDDILINCRRAATSVAICPPIPY 172
Query: 216 LSLKSCDISSTR 227
C SS R
Sbjct: 173 YLAVGCSDSSVR 184
Score = 207 (77.9 bits), Expect = 8.4e-46, Sum P(3) = 8.4e-46
Identities = 41/84 (48%), Positives = 56/84 (66%)
Query: 615 MKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNC 674
+K Y GH N T IK+A+F G +++ SGSD G FIW++ T + +L D VVNC
Sbjct: 674 IKMVYKGHRNSRTMIKEANFWGS--NFVMSGSDCGHIFIWDRHTAEHLMLLEADNHVVNC 731
Query: 675 VQCHPFDCVVATSGIDNTIKIWTP 698
+Q HPFD ++A+SGID IKIW+P
Sbjct: 732 LQPHPFDPILASSGIDYDIKIWSP 755
Score = 135 (52.6 bits), Expect = 8.4e-46, Sum P(3) = 8.4e-46
Identities = 40/129 (31%), Positives = 61/129 (47%)
Query: 228 PHLLLVGGSDAFARLYDRRMLPP-LTSCQKRMSPPPCVNYFCPMHLSEHGRSSLHLTHVT 286
P+ L VG SD+ R+YDRRML T V F P HL+ S +T +
Sbjct: 171 PYYLAVGCSDSSVRIYDRRMLGTRATGNYAGRGTIGMVARFVPPHLNN---KSCRVTSLC 227
Query: 287 FSPNGEEVLLSYSGEHVYLMDVNHAGGRAMRYTVGDASKIMSFTPTLNGLELQPPIHDFL 346
+S +G+E+L+SYS +++YL D R ++ + + P + L L+ D+
Sbjct: 228 YSEDGQEILVSYSSDYIYLFDPKDDTARELKVPSSEERREELRQPPVKRLRLRG---DWS 284
Query: 347 QTNIRVRGE 355
T R R E
Sbjct: 285 DTGPRARPE 293
Score = 41 (19.5 bits), Expect = 4.4e-12, Sum P(2) = 4.4e-12
Identities = 11/29 (37%), Positives = 14/29 (48%)
Query: 228 PHLLLVGGSDAFARLYDRRMLPPLTSCQK 256
P+ L G D R +D R+ TSC K
Sbjct: 121 PYTFLSCGEDGTVRWFDTRIK---TSCTK 146
Score = 39 (18.8 bits), Expect = 2.4e-28, Sum P(3) = 2.4e-28
Identities = 14/59 (23%), Positives = 19/59 (32%)
Query: 679 PFDCVVATSGIDNTIKIWTPSASVPSIVSGGAAGPDTADVLEAMESNQRKLSRNREHSL 737
P DC TS + T +P G G + V E +R+ R L
Sbjct: 606 PEDCSTRTSALQETDDSDDDPVLIPGARYRGGPGHRRSAVARIQELFRRRKERKEMEEL 664
>MGI|MGI:1921356 [details] [associations]
symbol:Dcaf6 "DDB1 and CUL4 associated factor 6"
species:10090 "Mus musculus" [GO:0005634 "nucleus" evidence=ISO]
[GO:0030374 "ligand-dependent nuclear receptor transcription
coactivator activity" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISO] InterPro:IPR017986 InterPro:IPR000048
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50096 PROSITE:PS50294 SMART:SM00015 SMART:SM00320
UniPathway:UPA00143 MGI:MGI:1921356 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0045944
GO:GO:0016567 GO:GO:0030374 GO:GO:0080008
GeneTree:ENSGT00530000062951 CTD:55827 eggNOG:NOG292060
HOGENOM:HOG000038027 HOVERGEN:HBG054871 KO:K11795 OMA:QTEAIGP
EMBL:AK004618 EMBL:AK077238 IPI:IPI00120084 RefSeq:NP_083035.1
UniGene:Mm.227605 ProteinModelPortal:Q9DC22 SMR:Q9DC22
IntAct:Q9DC22 STRING:Q9DC22 PhosphoSite:Q9DC22 PaxDb:Q9DC22
PRIDE:Q9DC22 Ensembl:ENSMUST00000027856 GeneID:74106 KEGG:mmu:74106
UCSC:uc007djb.2 InParanoid:Q9DC22 OrthoDB:EOG4KPT96 NextBio:339790
Bgee:Q9DC22 CleanEx:MM_IQWD1 Genevestigator:Q9DC22 Uniprot:Q9DC22
Length = 876
Score = 265 (98.3 bits), Expect = 1.6e-45, Sum P(3) = 1.6e-45
Identities = 64/192 (33%), Positives = 96/192 (50%)
Query: 37 VRRLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANV 96
++RL E L H GCVN I WN G ++SGSDDT + + + SRK+L +I +GH AN+
Sbjct: 38 IQRLKLEATLNVHDGCVNTICWNDTGEYILSGSDDTKLVISNPYSRKVLTTIRSGHRANI 97
Query: 97 FCTKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVE 156
F KF+P T D+ +VS +GD + N+ + D + CH ++
Sbjct: 98 FSAKFLPCTDDKQIVSCSGDGVIFYTNIEQ-------DAETNRQCQFTCHYGTTYEIMTV 150
Query: 157 VGNPHVVWSASEDGTLRQHDFRQGSSCPPAGSSHQECRN-ILLDLRCGAKRSLADPPKQT 215
+P+ S EDGT+R D R +SC + ++C++ IL++ R A PP
Sbjct: 151 PNDPYTFLSCGEDGTVRWFDTRIKTSC-----TKEDCKDDILINCRRAATSVAICPPVPY 205
Query: 216 LSLKSCDISSTR 227
C SS R
Sbjct: 206 YLAVGCSDSSVR 217
Score = 207 (77.9 bits), Expect = 1.6e-45, Sum P(3) = 1.6e-45
Identities = 41/84 (48%), Positives = 56/84 (66%)
Query: 615 MKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNC 674
+K Y GH N T IK+A+F G +++ SGSD G FIW++ T + +L D VVNC
Sbjct: 725 VKMVYKGHRNSRTMIKEANFWG--ANFVMSGSDCGHIFIWDRHTAEHLMLLEADNHVVNC 782
Query: 675 VQCHPFDCVVATSGIDNTIKIWTP 698
+Q HPFD ++A+SGID IKIW+P
Sbjct: 783 LQPHPFDPILASSGIDYDIKIWSP 806
Score = 140 (54.3 bits), Expect = 1.6e-45, Sum P(3) = 1.6e-45
Identities = 41/129 (31%), Positives = 61/129 (47%)
Query: 228 PHLLLVGGSDAFARLYDRRMLPP-LTSCQKRMSPPPCVNYFCPMHLSEHGRSSLHLTHVT 286
P+ L VG SD+ R+YDRRML T V F P HLS S +T +
Sbjct: 204 PYYLAVGCSDSSVRIYDRRMLGTRATGNYAGRGTTGMVARFIPSHLSN---KSCRVTSLC 260
Query: 287 FSPNGEEVLLSYSGEHVYLMDVNHAGGRAMRYTVGDASKIMSFTPTLNGLELQPPIHDFL 346
+S +G+E+L+SYS +++YL D R ++ + + P + L L+ D+
Sbjct: 261 YSEDGQEILVSYSSDYIYLFDPKDDTARELKTPSAEERREELRQPPVKRLRLRG---DWS 317
Query: 347 QTNIRVRGE 355
T R R E
Sbjct: 318 DTGPRARPE 326
Score = 41 (19.5 bits), Expect = 5.3e-12, Sum P(2) = 5.3e-12
Identities = 11/29 (37%), Positives = 14/29 (48%)
Query: 228 PHLLLVGGSDAFARLYDRRMLPPLTSCQK 256
P+ L G D R +D R+ TSC K
Sbjct: 154 PYTFLSCGEDGTVRWFDTRIK---TSCTK 179
>UNIPROTKB|Q5R9B8 [details] [associations]
symbol:DCAF6 "DDB1- and CUL4-associated factor 6"
species:9601 "Pongo abelii" [GO:0080008 "Cul4-RING ubiquitin ligase
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR000048
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50096 PROSITE:PS50294 SMART:SM00015 SMART:SM00320
UniPathway:UPA00143 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0016567 GO:GO:0080008
CTD:55827 HOVERGEN:HBG054871 KO:K11795 EMBL:CR858414 EMBL:CR859471
EMBL:CR860637 RefSeq:NP_001125965.1 RefSeq:NP_001128877.1
UniGene:Pab.18994 ProteinModelPortal:Q5R9B8 GeneID:100172900
KEGG:pon:100172900 InParanoid:Q5R9B8 Uniprot:Q5R9B8
Length = 860
Score = 264 (98.0 bits), Expect = 4.0e-45, Sum P(3) = 4.0e-45
Identities = 64/192 (33%), Positives = 97/192 (50%)
Query: 37 VRRLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANV 96
++RL E L H GCVN I WN G ++SGSDDT + + + SRK+L +I +GH AN+
Sbjct: 38 IQRLKLEATLNVHDGCVNTICWNDTGEYILSGSDDTKLVISNPYSRKVLTTIRSGHRANI 97
Query: 97 FCTKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVE 156
F KF+P T+D+ +VS +GD + N+ + D + CH ++
Sbjct: 98 FSAKFLPCTNDKQIVSCSGDGVIFYTNVEQ-------DAETNRQCQFTCHYGTTYEIMTV 150
Query: 157 VGNPHVVWSASEDGTLRQHDFRQGSSCPPAGSSHQECRN-ILLDLRCGAKRSLADPPKQT 215
+P+ S EDGT+R D R +SC + ++C++ IL++ R A PP
Sbjct: 151 PNDPYTFLSCGEDGTVRWFDTRIKTSC-----TKEDCKDDILINCRRAATSVAICPPIPY 205
Query: 216 LSLKSCDISSTR 227
C SS R
Sbjct: 206 YLAVGCSDSSVR 217
Score = 207 (77.9 bits), Expect = 4.0e-45, Sum P(3) = 4.0e-45
Identities = 41/84 (48%), Positives = 56/84 (66%)
Query: 615 MKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNC 674
+K Y GH N T IK+A+F G +++ SGSD G FIW++ T + +L D VVNC
Sbjct: 709 VKMVYKGHRNSRTMIKEANFWG--ANFVMSGSDCGHIFIWDRHTAEHLMLLEADNHVVNC 766
Query: 675 VQCHPFDCVVATSGIDNTIKIWTP 698
+Q HPFD ++A+SGID IKIW+P
Sbjct: 767 LQPHPFDPILASSGIDYDIKIWSP 790
Score = 137 (53.3 bits), Expect = 4.0e-45, Sum P(3) = 4.0e-45
Identities = 40/129 (31%), Positives = 61/129 (47%)
Query: 228 PHLLLVGGSDAFARLYDRRMLPP-LTSCQKRMSPPPCVNYFCPMHLSEHGRSSLHLTHVT 286
P+ L VG SD+ R+YDRRML T V F P HL+ S +T +
Sbjct: 204 PYYLAVGCSDSSVRIYDRRMLGTRATGNYAGRGTTGMVARFIPSHLNN---KSCRVTSLC 260
Query: 287 FSPNGEEVLLSYSGEHVYLMDVNHAGGRAMRYTVGDASKIMSFTPTLNGLELQPPIHDFL 346
+S +G+E+L+SYS +++YL D R ++ + + P + L L+ D+
Sbjct: 261 YSEDGQEILVSYSSDYIYLFDPKDDTARELKTPSAEERREELRQPPVKRLRLRG---DWS 317
Query: 347 QTNIRVRGE 355
T R R E
Sbjct: 318 DTGPRARPE 326
Score = 43 (20.2 bits), Expect = 3.1e-12, Sum P(2) = 3.1e-12
Identities = 10/29 (34%), Positives = 13/29 (44%)
Query: 185 PAGSSHQECRNILLDLRCGAKRSLADPPK 213
P S+ E ++ LD CG A P K
Sbjct: 576 PLDSNSGERNDLNLDSSCGVPEESASPEK 604
Score = 41 (19.5 bits), Expect = 5.0e-12, Sum P(2) = 5.0e-12
Identities = 11/29 (37%), Positives = 14/29 (48%)
Query: 228 PHLLLVGGSDAFARLYDRRMLPPLTSCQK 256
P+ L G D R +D R+ TSC K
Sbjct: 154 PYTFLSCGEDGTVRWFDTRIK---TSCTK 179
>UNIPROTKB|Q58WW2 [details] [associations]
symbol:DCAF6 "DDB1- and CUL4-associated factor 6"
species:9606 "Homo sapiens" [GO:0016567 "protein ubiquitination"
evidence=IEA;IC] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0030374
"ligand-dependent nuclear receptor transcription coactivator
activity" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IGI]
InterPro:IPR017986 InterPro:IPR000048 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50096
PROSITE:PS50294 SMART:SM00015 SMART:SM00320 UniPathway:UPA00143
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0045944 EMBL:CH471067 GO:GO:0016567 EMBL:Z97876 GO:GO:0030374
GO:GO:0080008 EMBL:AY766164 EMBL:DQ768089 EMBL:AF116725
EMBL:AK297847 EMBL:AL031287 EMBL:AL033531 EMBL:AL033532
EMBL:BC025262 EMBL:AL136738 IPI:IPI00157836 IPI:IPI00164246
IPI:IPI00290516 IPI:IPI00910205 RefSeq:NP_001017977.1
RefSeq:NP_001185885.1 RefSeq:NP_001185886.1 RefSeq:NP_060912.2
UniGene:Hs.435741 PDB:3I7O PDBsum:3I7O ProteinModelPortal:Q58WW2
SMR:Q58WW2 DIP:DIP-44678N IntAct:Q58WW2 STRING:Q58WW2
PhosphoSite:Q58WW2 DMDM:74755134 PaxDb:Q58WW2 PRIDE:Q58WW2
DNASU:55827 Ensembl:ENST00000312263 Ensembl:ENST00000367840
Ensembl:ENST00000367843 Ensembl:ENST00000432587 GeneID:55827
KEGG:hsa:55827 UCSC:uc001gev.3 UCSC:uc001gew.3 UCSC:uc001gex.3
CTD:55827 GeneCards:GC01P167905 HGNC:HGNC:30002 HPA:HPA030852
MIM:610494 neXtProt:NX_Q58WW2 PharmGKB:PA165751150 eggNOG:NOG292060
HOGENOM:HOG000038027 HOVERGEN:HBG054871 KO:K11795 OMA:QTEAIGP
ChiTaRS:DCAF6 EvolutionaryTrace:Q58WW2 GenomeRNAi:55827
NextBio:61026 ArrayExpress:Q58WW2 Bgee:Q58WW2 CleanEx:HS_IQWD1
Genevestigator:Q58WW2 Uniprot:Q58WW2
Length = 860
Score = 264 (98.0 bits), Expect = 4.0e-45, Sum P(3) = 4.0e-45
Identities = 64/192 (33%), Positives = 97/192 (50%)
Query: 37 VRRLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANV 96
++RL E L H GCVN I WN G ++SGSDDT + + + SRK+L +I +GH AN+
Sbjct: 38 IQRLKLEATLNVHDGCVNTICWNDTGEYILSGSDDTKLVISNPYSRKVLTTIRSGHRANI 97
Query: 97 FCTKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVE 156
F KF+P T+D+ +VS +GD + N+ + D + CH ++
Sbjct: 98 FSAKFLPCTNDKQIVSCSGDGVIFYTNVEQ-------DAETNRQCQFTCHYGTTYEIMTV 150
Query: 157 VGNPHVVWSASEDGTLRQHDFRQGSSCPPAGSSHQECRN-ILLDLRCGAKRSLADPPKQT 215
+P+ S EDGT+R D R +SC + ++C++ IL++ R A PP
Sbjct: 151 PNDPYTFLSCGEDGTVRWFDTRIKTSC-----TKEDCKDDILINCRRAATSVAICPPIPY 205
Query: 216 LSLKSCDISSTR 227
C SS R
Sbjct: 206 YLAVGCSDSSVR 217
Score = 207 (77.9 bits), Expect = 4.0e-45, Sum P(3) = 4.0e-45
Identities = 41/84 (48%), Positives = 56/84 (66%)
Query: 615 MKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNC 674
+K Y GH N T IK+A+F G +++ SGSD G FIW++ T + +L D VVNC
Sbjct: 709 VKMVYKGHRNSRTMIKEANFWG--ANFVMSGSDCGHIFIWDRHTAEHLMLLEADNHVVNC 766
Query: 675 VQCHPFDCVVATSGIDNTIKIWTP 698
+Q HPFD ++A+SGID IKIW+P
Sbjct: 767 LQPHPFDPILASSGIDYDIKIWSP 790
Score = 137 (53.3 bits), Expect = 4.0e-45, Sum P(3) = 4.0e-45
Identities = 40/129 (31%), Positives = 61/129 (47%)
Query: 228 PHLLLVGGSDAFARLYDRRMLPP-LTSCQKRMSPPPCVNYFCPMHLSEHGRSSLHLTHVT 286
P+ L VG SD+ R+YDRRML T V F P HL+ S +T +
Sbjct: 204 PYYLAVGCSDSSVRIYDRRMLGTRATGNYAGRGTTGMVARFIPSHLNN---KSCRVTSLC 260
Query: 287 FSPNGEEVLLSYSGEHVYLMDVNHAGGRAMRYTVGDASKIMSFTPTLNGLELQPPIHDFL 346
+S +G+E+L+SYS +++YL D R ++ + + P + L L+ D+
Sbjct: 261 YSEDGQEILVSYSSDYIYLFDPKDDTARELKTPSAEERREELRQPPVKRLRLRG---DWS 317
Query: 347 QTNIRVRGE 355
T R R E
Sbjct: 318 DTGPRARPE 326
Score = 41 (19.5 bits), Expect = 5.0e-12, Sum P(2) = 5.0e-12
Identities = 11/29 (37%), Positives = 14/29 (48%)
Query: 228 PHLLLVGGSDAFARLYDRRMLPPLTSCQK 256
P+ L G D R +D R+ TSC K
Sbjct: 154 PYTFLSCGEDGTVRWFDTRIK---TSCTK 179
>UNIPROTKB|F1MBJ1 [details] [associations]
symbol:DCAF6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0030374
"ligand-dependent nuclear receptor transcription coactivator
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR000048 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50096 PROSITE:PS50294
SMART:SM00015 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0045944 GO:GO:0030374 GO:GO:0080008
GeneTree:ENSGT00530000062951 CTD:55827 KO:K11795 OMA:QTEAIGP
EMBL:DAAA02006734 EMBL:DAAA02006728 EMBL:DAAA02006729
EMBL:DAAA02006730 EMBL:DAAA02006731 EMBL:DAAA02006732
EMBL:DAAA02006733 IPI:IPI00697106 RefSeq:NP_001178158.1
UniGene:Bt.92050 ProteinModelPortal:F1MBJ1
Ensembl:ENSBTAT00000027930 GeneID:524645 KEGG:bta:524645
NextBio:20874004 ArrayExpress:F1MBJ1 Uniprot:F1MBJ1
Length = 877
Score = 264 (98.0 bits), Expect = 4.4e-45, Sum P(3) = 4.4e-45
Identities = 64/192 (33%), Positives = 97/192 (50%)
Query: 37 VRRLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANV 96
++RL E L H GCVN I WN G ++SGSDDT + + + SRK+L +I +GH AN+
Sbjct: 38 IQRLKLEATLNVHDGCVNTICWNETGEYILSGSDDTKLVISNPYSRKVLTTIRSGHRANI 97
Query: 97 FCTKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVE 156
F KF+P T+D+ +VS +GD + N+ + D + CH ++
Sbjct: 98 FSAKFLPCTNDKQIVSCSGDGVIFYTNVEQ-------DAETNRQCQFTCHYGTTYEIMTV 150
Query: 157 VGNPHVVWSASEDGTLRQHDFRQGSSCPPAGSSHQECRN-ILLDLRCGAKRSLADPPKQT 215
+P+ S EDGT+R D R +SC + ++C++ IL++ R A PP
Sbjct: 151 PNDPYTFLSCGEDGTVRWFDTRIKTSC-----TKEDCKDDILINCRRAATSVAICPPIPY 205
Query: 216 LSLKSCDISSTR 227
C SS R
Sbjct: 206 YLAVGCSDSSVR 217
Score = 207 (77.9 bits), Expect = 4.4e-45, Sum P(3) = 4.4e-45
Identities = 41/84 (48%), Positives = 56/84 (66%)
Query: 615 MKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNC 674
+K Y GH N T IK+A+F G +++ SGSD G FIW++ T + +L D VVNC
Sbjct: 726 VKMVYKGHRNSRTMIKEANFWG--ANFVMSGSDCGHIFIWDRHTAEHLMLLEADNHVVNC 783
Query: 675 VQCHPFDCVVATSGIDNTIKIWTP 698
+Q HPFD ++A+SGID IKIW+P
Sbjct: 784 LQPHPFDPILASSGIDYDIKIWSP 807
Score = 137 (53.3 bits), Expect = 4.4e-45, Sum P(3) = 4.4e-45
Identities = 40/129 (31%), Positives = 61/129 (47%)
Query: 228 PHLLLVGGSDAFARLYDRRMLPP-LTSCQKRMSPPPCVNYFCPMHLSEHGRSSLHLTHVT 286
P+ L VG SD+ R+YDRRML T V F P HL+ S +T +
Sbjct: 204 PYYLAVGCSDSSVRIYDRRMLGTRATGNYAGRGTTGMVARFIPSHLNN---KSCRVTSLC 260
Query: 287 FSPNGEEVLLSYSGEHVYLMDVNHAGGRAMRYTVGDASKIMSFTPTLNGLELQPPIHDFL 346
+S +G+E+L+SYS +++YL D R ++ + + P + L L+ D+
Sbjct: 261 YSEDGQEILVSYSSDYIYLFDPKDDTARELKTPSAEERREELRQPPVKRLRLRG---DWS 317
Query: 347 QTNIRVRGE 355
T R R E
Sbjct: 318 DTGPRARPE 326
Score = 41 (19.5 bits), Expect = 1.6e-11, Sum P(3) = 1.6e-11
Identities = 11/29 (37%), Positives = 14/29 (48%)
Query: 228 PHLLLVGGSDAFARLYDRRMLPPLTSCQK 256
P+ L G D R +D R+ TSC K
Sbjct: 154 PYTFLSCGEDGTVRWFDTRIK---TSCTK 179
Score = 39 (18.8 bits), Expect = 7.0e-35, Sum P(3) = 7.0e-35
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 271 HLSEHGRSSLHLTHVTFSPNGEE 293
HL+ S H T + SP+ E+
Sbjct: 422 HLASSSTESPHSTSLLSSPDSEQ 444
>UNIPROTKB|E2REY6 [details] [associations]
symbol:DCAF6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0030374
"ligand-dependent nuclear receptor transcription coactivator
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR000048 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50096 PROSITE:PS50294
SMART:SM00015 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0045944 GO:GO:0030374 GO:GO:0080008
GeneTree:ENSGT00530000062951 CTD:55827 KO:K11795 OMA:QTEAIGP
EMBL:AAEX03005222 RefSeq:XP_537208.2 ProteinModelPortal:E2REY6
Ensembl:ENSCAFT00000024361 GeneID:480085 KEGG:cfa:480085
Uniprot:E2REY6
Length = 950
Score = 264 (98.0 bits), Expect = 6.5e-45, Sum P(3) = 6.5e-45
Identities = 64/192 (33%), Positives = 97/192 (50%)
Query: 37 VRRLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANV 96
++RL E L H GCVN I WN G ++SGSDDT + + + SRK+L +I +GH AN+
Sbjct: 38 IQRLKLEATLNVHDGCVNTICWNETGEYILSGSDDTKLVISNPYSRKVLTTIRSGHRANI 97
Query: 97 FCTKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVE 156
F KF+P T+D+ +VS +GD + N+ + D + CH ++
Sbjct: 98 FSAKFLPCTNDKQIVSCSGDGVIFYTNVEQ-------DAETNRQCQFTCHYGTTYEIMTV 150
Query: 157 VGNPHVVWSASEDGTLRQHDFRQGSSCPPAGSSHQECRN-ILLDLRCGAKRSLADPPKQT 215
+P+ S EDGT+R D R +SC + ++C++ IL++ R A PP
Sbjct: 151 PNDPYTFLSCGEDGTVRWFDTRIKTSC-----TKEDCKDDILINCRRAATSVAICPPIPY 205
Query: 216 LSLKSCDISSTR 227
C SS R
Sbjct: 206 YLAVGCSDSSVR 217
Score = 207 (77.9 bits), Expect = 6.5e-45, Sum P(3) = 6.5e-45
Identities = 41/84 (48%), Positives = 56/84 (66%)
Query: 615 MKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNC 674
+K Y GH N T IK+A+F G +++ SGSD G FIW++ T + +L D VVNC
Sbjct: 799 VKMVYKGHRNSRTMIKEANFWG--ANFVMSGSDCGHIFIWDRHTAEHLMLLEADNHVVNC 856
Query: 675 VQCHPFDCVVATSGIDNTIKIWTP 698
+Q HPFD ++A+SGID IKIW+P
Sbjct: 857 LQPHPFDPILASSGIDYDIKIWSP 880
Score = 137 (53.3 bits), Expect = 6.5e-45, Sum P(3) = 6.5e-45
Identities = 40/129 (31%), Positives = 61/129 (47%)
Query: 228 PHLLLVGGSDAFARLYDRRMLPP-LTSCQKRMSPPPCVNYFCPMHLSEHGRSSLHLTHVT 286
P+ L VG SD+ R+YDRRML T V F P HL+ S +T +
Sbjct: 204 PYYLAVGCSDSSVRIYDRRMLGTRATGNYAGRGTTGMVARFIPSHLNN---KSCRVTSLC 260
Query: 287 FSPNGEEVLLSYSGEHVYLMDVNHAGGRAMRYTVGDASKIMSFTPTLNGLELQPPIHDFL 346
+S +G+E+L+SYS +++YL D R ++ + + P + L L+ D+
Sbjct: 261 YSEDGQEILVSYSSDYIYLFDPKDDTARELKTPSAEERREELRQPPVKRLRLRG---DWS 317
Query: 347 QTNIRVRGE 355
T R R E
Sbjct: 318 DTGPRARPE 326
Score = 42 (19.8 bits), Expect = 5.0e-35, Sum P(3) = 5.0e-35
Identities = 12/53 (22%), Positives = 21/53 (39%)
Query: 253 SCQKRMSPPPCVNYFCPMHLSEHGRSSLHLTHVTFSPNGEE-VLLSYSGEHVY 304
S ++ + P H + S H T + SP+ E+ + SG H +
Sbjct: 404 SAEQSLQPSTSSAMSAQAHSTSSSTESPHSTSLLSSPDNEQRQSVEASGRHTH 456
Score = 41 (19.5 bits), Expect = 1.1e-11, Sum P(3) = 1.1e-11
Identities = 11/29 (37%), Positives = 14/29 (48%)
Query: 228 PHLLLVGGSDAFARLYDRRMLPPLTSCQK 256
P+ L G D R +D R+ TSC K
Sbjct: 154 PYTFLSCGEDGTVRWFDTRIK---TSCTK 179
>RGD|1561961 [details] [associations]
symbol:Dcaf6 "DDB1 and CUL4 associated factor 6" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0030374 "ligand-dependent nuclear receptor transcription
coactivator activity" evidence=IEA;ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA;ISO] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR000048
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50096
PROSITE:PS50294 SMART:SM00015 SMART:SM00320 RGD:1561961
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0045944
GO:GO:0030374 GO:GO:0080008 GeneTree:ENSGT00530000062951 CTD:55827
KO:K11795 OMA:QTEAIGP OrthoDB:EOG4KPT96 EMBL:CH473958
IPI:IPI00957421 RefSeq:XP_213926.5 Ensembl:ENSRNOT00000004199
GeneID:289181 KEGG:rno:289181 UCSC:RGD:1561961 NextBio:629337
Uniprot:D4A8L4
Length = 851
Score = 263 (97.6 bits), Expect = 1.4e-44, Sum P(4) = 1.4e-44
Identities = 64/192 (33%), Positives = 96/192 (50%)
Query: 37 VRRLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANV 96
++RL E L H GCVN I WN G ++SGSDDT + + + SRK+L +I +GH AN+
Sbjct: 38 IQRLKLEATLNVHDGCVNTICWNDTGEYILSGSDDTKLVISNPYSRKVLTTIRSGHRANI 97
Query: 97 FCTKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVE 156
F KF+P T D+ +VS +GD + N+ + D + CH ++
Sbjct: 98 FSAKFLPCTDDKQIVSCSGDGVIFYTNIEQ-------DAETNRQCQFTCHYGTTYEIMTV 150
Query: 157 VGNPHVVWSASEDGTLRQHDFRQGSSCPPAGSSHQECRN-ILLDLRCGAKRSLADPPKQT 215
+P+ S EDGT+R D R +SC + ++C++ IL++ R A PP
Sbjct: 151 PNDPYTFLSCGEDGTVRWFDTRIKTSC-----TKEDCKDDILINCRRAATSVAICPPVPY 205
Query: 216 LSLKSCDISSTR 227
C SS R
Sbjct: 206 HLAVGCSDSSVR 217
Score = 207 (77.9 bits), Expect = 1.4e-44, Sum P(4) = 1.4e-44
Identities = 41/84 (48%), Positives = 56/84 (66%)
Query: 615 MKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNC 674
+K Y GH N T IK+A+F G +++ SGSD G FIW++ T + +L D VVNC
Sbjct: 700 VKMVYKGHRNSRTMIKEANFWG--ANFVMSGSDCGHIFIWDRHTAEHLMLLEADNHVVNC 757
Query: 675 VQCHPFDCVVATSGIDNTIKIWTP 698
+Q HPFD ++A+SGID IKIW+P
Sbjct: 758 LQPHPFDPILASSGIDYDIKIWSP 781
Score = 138 (53.6 bits), Expect = 1.4e-44, Sum P(4) = 1.4e-44
Identities = 41/129 (31%), Positives = 61/129 (47%)
Query: 228 PHLLLVGGSDAFARLYDRRMLPP-LTSCQKRMSPPPCVNYFCPMHLSEHGRSSLHLTHVT 286
P+ L VG SD+ R+YDRRML T V F P HLS S +T +
Sbjct: 204 PYHLAVGCSDSSVRIYDRRMLGTRATGNYAGRGTTGMVARFIPSHLSN---KSCRVTSLC 260
Query: 287 FSPNGEEVLLSYSGEHVYLMDVNHAGGRAMRYTVGDASKIMSFTPTLNGLELQPPIHDFL 346
+S +G+E+L+SYS +++YL D R ++ + + P + L L+ D+
Sbjct: 261 YSEDGQEILVSYSSDYIYLFDPKDDTARELKTPSAEERREELRQPPVKRLRLRG---DWS 317
Query: 347 QTNIRVRGE 355
T R R E
Sbjct: 318 DTGPRARPE 326
Score = 41 (19.5 bits), Expect = 2.2e-11, Sum P(3) = 2.2e-11
Identities = 11/29 (37%), Positives = 14/29 (48%)
Query: 228 PHLLLVGGSDAFARLYDRRMLPPLTSCQK 256
P+ L G D R +D R+ TSC K
Sbjct: 154 PYTFLSCGEDGTVRWFDTRIK---TSCTK 179
Score = 37 (18.1 bits), Expect = 1.4e-44, Sum P(4) = 1.4e-44
Identities = 7/32 (21%), Positives = 12/32 (37%)
Query: 581 DSARETVDANXXXXXXXXXXQNDRIPYQPETV 612
++ RET + N +P Q E +
Sbjct: 596 ETDRETCEQTSTDSATRRASDNPELPSQTEAI 627
>TAIR|locus:2121164 [details] [associations]
symbol:AT4G38480 "AT4G38480" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 Gene3D:2.130.10.10 SUPFAM:SSF50978
KO:K11804 IPI:IPI00543482 RefSeq:NP_568042.1 UniGene:At.31171
ProteinModelPortal:F4JTP6 SMR:F4JTP6 EnsemblPlants:AT4G38480.1
GeneID:830004 KEGG:ath:AT4G38480 OMA:VAGMDEY Uniprot:F4JTP6
Length = 471
Score = 256 (95.2 bits), Expect = 1.3e-42, Sum P(3) = 1.3e-42
Identities = 58/176 (32%), Positives = 99/176 (56%)
Query: 5 PFHDGSIYDMLDTRHTDTRPDVNHSLQMHSS--LVRRLSQERELEGHQGCVNAISWNSKG 62
P D S+ ++ + R P+ + S + +S L+RRL +++L+ H+GCVN +S+N+ G
Sbjct: 9 PRTDHSVVNVWE-RELGLLPNRSFSNRFSASEDLLRRLGLDKKLDKHKGCVNTVSFNADG 67
Query: 63 SLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPETSDELVVSGAGDAEVRLF 122
+L+SGSDD + +W + + + S ++GH N+F KF+P + D +V+ A D +VR
Sbjct: 68 DILLSGSDDRQVILWDWQTASVKLSFDSGHFNNIFQAKFMPFSDDRTIVTSAADKQVRYS 127
Query: 123 NLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHVVWSASEDGTLRQHDFR 178
+ L+ + S L + H V KLAVE G+P ++ EDG ++ D R
Sbjct: 128 KI-------LESGQVETSLLGK-HQGPVHKLAVEPGSPFSFYTCGEDGAVKHFDLR 175
Score = 207 (77.9 bits), Expect = 1.3e-42, Sum P(3) = 1.3e-42
Identities = 43/108 (39%), Positives = 61/108 (56%)
Query: 606 PYQPETVIDMK---QRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLI 662
PY T + + Q Y H N T +K +F G + +Y+ SGSD GR FIW K+ G L+
Sbjct: 287 PYPSSTKTEERMTPQVYKEHTNRET-VKGVNFFGPKCEYVVSGSDCGRIFIWRKKDGELL 345
Query: 663 KMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIWTPSASVPSIVSGGA 710
+ + D VVNC++ HP ++ +SGID IKIWTP + + G A
Sbjct: 346 RAMEADRHVVNCIESHPHMPLMCSSGIDTDIKIWTPGGTEKPLSPGNA 393
Score = 104 (41.7 bits), Expect = 1.3e-42, Sum P(3) = 1.3e-42
Identities = 30/88 (34%), Positives = 44/88 (50%)
Query: 218 LKSCDISSTRPHLLLVGGSDAFARLYDRRMLPPLTSCQKRMSPPPCVNYFCPMHLSEHGR 277
L + + P LL V G D +AR+YD R + + P +++FCP HL G
Sbjct: 196 LHAIAVDPRNPGLLAVAGMDEYARVYDIRSYR--SEGWYNFTQP--IDHFCPGHLI--GD 249
Query: 278 SSLHLTHVTFSPNGEEVLLSYSGEHVYL 305
+ +T + FS E +L SYS E +YL
Sbjct: 250 DHVGITGLAFSDQSE-LLASYSDEFIYL 276
>UNIPROTKB|Q5R448 [details] [associations]
symbol:DCAF8 "DDB1- and CUL4-associated factor 8"
species:9601 "Pongo abelii" [GO:0080008 "Cul4-RING ubiquitin ligase
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0016567 GO:GO:0080008
CTD:50717 HOVERGEN:HBG053807 KO:K11804 EMBL:CR861411
RefSeq:NP_001127032.1 UniGene:Pab.18321 ProteinModelPortal:Q5R448
GeneID:100174058 KEGG:pon:100174058 InParanoid:Q5R448
Uniprot:Q5R448
Length = 597
Score = 208 (78.3 bits), Expect = 4.0e-39, Sum P(3) = 4.0e-39
Identities = 39/93 (41%), Positives = 63/93 (67%)
Query: 617 QRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEA-VVNCV 675
+RY GH N T +K +F G + +++ SGSD G F+WEK + ++I+ + GD+ VVNC+
Sbjct: 426 KRYKGHRNNAT-VKGVNFYGPKSEFVVSGSDCGHIFLWEKSSCQIIQFMEGDKGGVVNCL 484
Query: 676 QCHPFDCVVATSGIDNTIKIWTPSASVPSIVSG 708
+ HP V+ATSG+D+ +KIW P+A + ++G
Sbjct: 485 EPHPHLPVLATSGLDHDVKIWAPTAEASTELTG 517
Score = 208 (78.3 bits), Expect = 4.0e-39, Sum P(3) = 4.0e-39
Identities = 52/143 (36%), Positives = 73/143 (51%)
Query: 37 VRRLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANV 96
V+R + LEGH GCVN + +N +G+ L SGSDD + VW + R+ + E+GH +NV
Sbjct: 180 VQRFRLQHGLEGHTGCVNTLHFNQRGTWLASGSDDLKVVVWDWVRRQPVLDFESGHKSNV 239
Query: 97 FCTKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVE 156
F KF+P + D + A D +VR+ LS N + Q H KLA+E
Sbjct: 240 FQAKFLPNSGDSTLAMRARDGQVRVAELSATQ---CCKNT---KRVAQ-HKGASHKLALE 292
Query: 157 VGNPHVVWSASEDGTLRQHDFRQ 179
+P SA ED + D RQ
Sbjct: 293 PDSPCTFLSAGEDAVVFTIDLRQ 315
Score = 131 (51.2 bits), Expect = 4.0e-39, Sum P(3) = 4.0e-39
Identities = 32/113 (28%), Positives = 57/113 (50%)
Query: 201 RCGAKRSLADPPKQTLSLKSCDISSTRPHLLLVGGSDAFARLYDRRMLPPLTSCQKRMSP 260
R +K + ++ + L + ++ H VGG D F R+YD+R + +
Sbjct: 317 RPASKLVVTKEKEKKVGLYTIYVNPANTHQFAVGGRDQFVRIYDQRKIDENEN------- 369
Query: 261 PPCVNYFCPMHLSEHGRSSLHLTHVTFSPNGEEVLLSYSGEHVYLMDVNHAGG 313
+ FCP HL +G S ++T + +S +G E+L SY+ E +YL + +H+ G
Sbjct: 370 NGVLKKFCPHHLV-NGESKANITCLVYSHDGTELLASYNDEDIYLFNSSHSDG 421
>RGD|1308513 [details] [associations]
symbol:Dcaf8 "DDB1 and CUL4 associated factor 8" species:10116
"Rattus norvegicus" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISO;ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 RGD:1308513 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 GO:GO:0016567
GO:GO:0080008 GeneTree:ENSGT00530000062951 CTD:50717
HOVERGEN:HBG053807 KO:K11804 OrthoDB:EOG47H5PN HOGENOM:HOG000243561
OMA:EQPRRRV EMBL:BC085957 IPI:IPI00192480 RefSeq:NP_001014253.1
UniGene:Rn.203073 ProteinModelPortal:Q5U2M6 PhosphoSite:Q5U2M6
PRIDE:Q5U2M6 Ensembl:ENSRNOT00000008944 GeneID:364050
KEGG:rno:364050 UCSC:RGD:1308513 InParanoid:Q5U2M6 NextBio:684737
Genevestigator:Q5U2M6 Uniprot:Q5U2M6
Length = 591
Score = 208 (78.3 bits), Expect = 2.0e-38, Sum P(3) = 2.0e-38
Identities = 39/93 (41%), Positives = 63/93 (67%)
Query: 617 QRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEA-VVNCV 675
+RY GH N T +K +F G + +++ SGSD G F+WEK + ++I+ + GD+ VVNC+
Sbjct: 420 KRYKGHRNNAT-VKGVNFYGPKSEFVVSGSDCGHIFLWEKSSCQIIQFMEGDKGGVVNCL 478
Query: 676 QCHPFDCVVATSGIDNTIKIWTPSASVPSIVSG 708
+ HP V+ATSG+D+ +KIW P+A + ++G
Sbjct: 479 EPHPHLPVLATSGLDHDVKIWAPTAEASTELTG 511
Score = 207 (77.9 bits), Expect = 2.0e-38, Sum P(3) = 2.0e-38
Identities = 52/143 (36%), Positives = 73/143 (51%)
Query: 37 VRRLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANV 96
V+R + LEGH GCVN + +N +G+ L SGSDD + VW + R+ + E+GH +NV
Sbjct: 174 VQRFRLQHGLEGHTGCVNTLHFNQRGTWLASGSDDLKVVVWDWVRRQPVLDFESGHKSNV 233
Query: 97 FCTKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVE 156
F KF+P + D + A D +VR+ LS N + Q H KLA+E
Sbjct: 234 FQAKFLPNSGDSTLAMCARDGQVRVAELSATQ---CCKNT---KRVAQ-HKGASHKLALE 286
Query: 157 VGNPHVVWSASEDGTLRQHDFRQ 179
+P SA ED + D RQ
Sbjct: 287 PDSPCTFLSAGEDAVVFTIDLRQ 309
Score = 125 (49.1 bits), Expect = 2.0e-38, Sum P(3) = 2.0e-38
Identities = 31/113 (27%), Positives = 56/113 (49%)
Query: 201 RCGAKRSLADPPKQTLSLKSCDISSTRPHLLLVGGSDAFARLYDRRMLPPLTSCQKRMSP 260
R +K + ++ + L + ++ H VGG D F R+YD+R + +
Sbjct: 311 RPASKLVVTKEKEKKVGLYTIYVNPANTHQFAVGGRDQFVRIYDQRKIDENEN------- 363
Query: 261 PPCVNYFCPMHLSEHGRSSLHLTHVTFSPNGEEVLLSYSGEHVYLMDVNHAGG 313
+ FCP HL + S ++T + +S +G E+L SY+ E +YL + +H+ G
Sbjct: 364 NGVLKKFCPHHLV-NSESKANITCLVYSHDGTELLASYNDEDIYLFNSSHSDG 415
>UNIPROTKB|Q5TAQ9 [details] [associations]
symbol:DCAF8 "DDB1- and CUL4-associated factor 8"
species:9606 "Homo sapiens" [GO:0016567 "protein ubiquitination"
evidence=IEA;IC] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
UniPathway:UPA00143 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 eggNOG:COG2319 GO:GO:0016567 EMBL:CH471121
GO:GO:0080008 EMBL:U06631 EMBL:AK223475 EMBL:CR749801 EMBL:AL139011
EMBL:BC013107 EMBL:BC080597 EMBL:BC098271 EMBL:BC099709
EMBL:BC099846 EMBL:BC111063 IPI:IPI00290071 IPI:IPI00854775
RefSeq:NP_056541.2 UniGene:Hs.632447 PDB:3I8E PDBsum:3I8E
ProteinModelPortal:Q5TAQ9 SMR:Q5TAQ9 DIP:DIP-48762N IntAct:Q5TAQ9
MINT:MINT-1446617 STRING:Q5TAQ9 PhosphoSite:Q5TAQ9 DMDM:74756455
PaxDb:Q5TAQ9 PRIDE:Q5TAQ9 Ensembl:ENST00000326837
Ensembl:ENST00000368073 Ensembl:ENST00000368074 GeneID:50717
KEGG:hsa:50717 UCSC:uc001fvn.2 UCSC:uc001fvp.4 CTD:50717
GeneCards:GC01M160185 H-InvDB:HIX0200230 HGNC:HGNC:24891
HPA:HPA027218 HPA:HPA027381 neXtProt:NX_Q5TAQ9 PharmGKB:PA165751195
HOVERGEN:HBG053807 InParanoid:Q5TAQ9 KO:K11804 OrthoDB:EOG47H5PN
PhylomeDB:Q5TAQ9 ChiTaRS:DCAF8 EvolutionaryTrace:Q5TAQ9
GenomeRNAi:50717 NextBio:53224 ArrayExpress:Q5TAQ9 Bgee:Q5TAQ9
CleanEx:HS_WDR42A Genevestigator:Q5TAQ9 Uniprot:Q5TAQ9
Length = 597
Score = 208 (78.3 bits), Expect = 2.1e-38, Sum P(3) = 2.1e-38
Identities = 39/93 (41%), Positives = 63/93 (67%)
Query: 617 QRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEA-VVNCV 675
+RY GH N T +K +F G + +++ SGSD G F+WEK + ++I+ + GD+ VVNC+
Sbjct: 426 KRYKGHRNNAT-VKGVNFYGPKSEFVVSGSDCGHIFLWEKSSCQIIQFMEGDKGGVVNCL 484
Query: 676 QCHPFDCVVATSGIDNTIKIWTPSASVPSIVSG 708
+ HP V+ATSG+D+ +KIW P+A + ++G
Sbjct: 485 EPHPHLPVLATSGLDHDVKIWAPTAEASTELTG 517
Score = 207 (77.9 bits), Expect = 2.1e-38, Sum P(3) = 2.1e-38
Identities = 52/143 (36%), Positives = 73/143 (51%)
Query: 37 VRRLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANV 96
V+R + LEGH GCVN + +N +G+ L SGSDD + VW + R+ + E+GH +NV
Sbjct: 180 VQRFRLQHGLEGHTGCVNTLHFNQRGTWLASGSDDLKVVVWDWVRRQPVLDFESGHKSNV 239
Query: 97 FCTKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVE 156
F KF+P + D + A D +VR+ LS N + Q H KLA+E
Sbjct: 240 FQAKFLPNSGDSTLAMCARDGQVRVAELSATQ---CCKNT---KRVAQ-HKGASHKLALE 292
Query: 157 VGNPHVVWSASEDGTLRQHDFRQ 179
+P SA ED + D RQ
Sbjct: 293 PDSPCTFLSAGEDAVVFTIDLRQ 315
Score = 125 (49.1 bits), Expect = 2.1e-38, Sum P(3) = 2.1e-38
Identities = 31/113 (27%), Positives = 56/113 (49%)
Query: 201 RCGAKRSLADPPKQTLSLKSCDISSTRPHLLLVGGSDAFARLYDRRMLPPLTSCQKRMSP 260
R +K + ++ + L + ++ H VGG D F R+YD+R + +
Sbjct: 317 RPASKLVVTKEKEKKVGLYTIYVNPANTHQFAVGGRDQFVRIYDQRKIDENEN------- 369
Query: 261 PPCVNYFCPMHLSEHGRSSLHLTHVTFSPNGEEVLLSYSGEHVYLMDVNHAGG 313
+ FCP HL + S ++T + +S +G E+L SY+ E +YL + +H+ G
Sbjct: 370 NGVLKKFCPHHLV-NSESKANITCLVYSHDGTELLASYNDEDIYLFNSSHSDG 421
>MGI|MGI:91860 [details] [associations]
symbol:Dcaf8 "DDB1 and CUL4 associated factor 8" species:10090
"Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0080008
"Cul4-RING ubiquitin ligase complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
UniPathway:UPA00143 MGI:MGI:91860 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 GO:GO:0016567
GO:GO:0080008 GeneTree:ENSGT00530000062951 CTD:50717
HOVERGEN:HBG053807 KO:K11804 OrthoDB:EOG47H5PN ChiTaRS:DCAF8
EMBL:AK098114 EMBL:AK146825 EMBL:BC023704 EMBL:BC023804
IPI:IPI00229856 IPI:IPI00407739 RefSeq:NP_705783.1
UniGene:Mm.159915 ProteinModelPortal:Q8N7N5 SMR:Q8N7N5
PhosphoSite:Q8N7N5 PaxDb:Q8N7N5 PRIDE:Q8N7N5
Ensembl:ENSMUST00000074144 GeneID:98193 KEGG:mmu:98193
UCSC:uc007dpr.2 UCSC:uc007dps.2 HOGENOM:HOG000243561
InParanoid:Q8N7N5 OMA:EQPRRRV NextBio:353348 Bgee:Q8N7N5
CleanEx:MM_WDR42A Genevestigator:Q8N7N5 Uniprot:Q8N7N5
Length = 591
Score = 208 (78.3 bits), Expect = 4.1e-38, Sum P(3) = 4.1e-38
Identities = 39/93 (41%), Positives = 63/93 (67%)
Query: 617 QRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEA-VVNCV 675
+RY GH N T +K +F G + +++ SGSD G F+WEK + ++I+ + GD+ VVNC+
Sbjct: 420 KRYKGHRNNAT-VKGVNFYGPKSEFVVSGSDCGHIFLWEKSSCQIIQFMEGDKGGVVNCL 478
Query: 676 QCHPFDCVVATSGIDNTIKIWTPSASVPSIVSG 708
+ HP V+ATSG+D+ +KIW P+A + ++G
Sbjct: 479 EPHPHLPVLATSGLDHDVKIWAPTAEASTELTG 511
Score = 207 (77.9 bits), Expect = 4.1e-38, Sum P(3) = 4.1e-38
Identities = 52/143 (36%), Positives = 73/143 (51%)
Query: 37 VRRLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANV 96
V+R + LEGH GCVN + +N +G+ L SGSDD + VW + R+ + E+GH +NV
Sbjct: 174 VQRFRLQHGLEGHTGCVNTLHFNQRGTWLASGSDDLKVVVWDWVRRQPVLDFESGHKSNV 233
Query: 97 FCTKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVE 156
F KF+P + D + A D +VR+ LS N + Q H KLA+E
Sbjct: 234 FQAKFLPNSGDSTLAMCARDGQVRVAELSATQ---CCKNT---KRVAQ-HKGASHKLALE 286
Query: 157 VGNPHVVWSASEDGTLRQHDFRQ 179
+P SA ED + D RQ
Sbjct: 287 PDSPCTFLSAGEDAVVFTIDLRQ 309
Score = 122 (48.0 bits), Expect = 4.1e-38, Sum P(3) = 4.1e-38
Identities = 30/113 (26%), Positives = 56/113 (49%)
Query: 201 RCGAKRSLADPPKQTLSLKSCDISSTRPHLLLVGGSDAFARLYDRRMLPPLTSCQKRMSP 260
R +K + ++ + L + ++ H VGG D + R+YD+R + +
Sbjct: 311 RPASKLVVTKEKEKKVGLYTIYVNPANTHQFAVGGRDQYVRIYDQRKIDENEN------- 363
Query: 261 PPCVNYFCPMHLSEHGRSSLHLTHVTFSPNGEEVLLSYSGEHVYLMDVNHAGG 313
+ FCP HL + S ++T + +S +G E+L SY+ E +YL + +H+ G
Sbjct: 364 NGVLKKFCPHHLV-NSESKANITCLVYSHDGTELLASYNDEDIYLFNSSHSDG 415
>UNIPROTKB|G3V3G9 [details] [associations]
symbol:DCAF8 "DDB1- and CUL4-associated factor 8"
species:9606 "Homo sapiens" [GO:0005777 "peroxisome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006708
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04614 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 EMBL:AL139011 HGNC:HGNC:24891 ChiTaRS:DCAF8
OMA:EQPRRRV Ensembl:ENST00000555195 Ensembl:ENST00000556710
Uniprot:G3V3G9
Length = 751
Score = 208 (78.3 bits), Expect = 6.8e-38, Sum P(3) = 6.8e-38
Identities = 39/93 (41%), Positives = 63/93 (67%)
Query: 617 QRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEA-VVNCV 675
+RY GH N T +K +F G + +++ SGSD G F+WEK + ++I+ + GD+ VVNC+
Sbjct: 580 KRYKGHRNNAT-VKGVNFYGPKSEFVVSGSDCGHIFLWEKSSCQIIQFMEGDKGGVVNCL 638
Query: 676 QCHPFDCVVATSGIDNTIKIWTPSASVPSIVSG 708
+ HP V+ATSG+D+ +KIW P+A + ++G
Sbjct: 639 EPHPHLPVLATSGLDHDVKIWAPTAEASTELTG 671
Score = 207 (77.9 bits), Expect = 6.8e-38, Sum P(3) = 6.8e-38
Identities = 52/143 (36%), Positives = 73/143 (51%)
Query: 37 VRRLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANV 96
V+R + LEGH GCVN + +N +G+ L SGSDD + VW + R+ + E+GH +NV
Sbjct: 334 VQRFRLQHGLEGHTGCVNTLHFNQRGTWLASGSDDLKVVVWDWVRRQPVLDFESGHKSNV 393
Query: 97 FCTKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVE 156
F KF+P + D + A D +VR+ LS N + Q H KLA+E
Sbjct: 394 FQAKFLPNSGDSTLAMCARDGQVRVAELSATQ---CCKNT---KRVAQ-HKGASHKLALE 446
Query: 157 VGNPHVVWSASEDGTLRQHDFRQ 179
+P SA ED + D RQ
Sbjct: 447 PDSPCTFLSAGEDAVVFTIDLRQ 469
Score = 125 (49.1 bits), Expect = 6.8e-38, Sum P(3) = 6.8e-38
Identities = 31/113 (27%), Positives = 56/113 (49%)
Query: 201 RCGAKRSLADPPKQTLSLKSCDISSTRPHLLLVGGSDAFARLYDRRMLPPLTSCQKRMSP 260
R +K + ++ + L + ++ H VGG D F R+YD+R + +
Sbjct: 471 RPASKLVVTKEKEKKVGLYTIYVNPANTHQFAVGGRDQFVRIYDQRKIDENEN------- 523
Query: 261 PPCVNYFCPMHLSEHGRSSLHLTHVTFSPNGEEVLLSYSGEHVYLMDVNHAGG 313
+ FCP HL + S ++T + +S +G E+L SY+ E +YL + +H+ G
Sbjct: 524 NGVLKKFCPHHLV-NSESKANITCLVYSHDGTELLASYNDEDIYLFNSSHSDG 575
>WB|WBGene00044440 [details] [associations]
symbol:adpr-1 species:6239 "Caenorhabditis elegans"
[GO:0019915 "lipid storage" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR011990 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0019915 Gene3D:1.25.40.10
EMBL:FO081821 GeneTree:ENSGT00530000062951 KO:K11807 OMA:HRYCGHC
RefSeq:NP_001021829.1 UniGene:Cel.29679 ProteinModelPortal:Q4W5Q8
SMR:Q4W5Q8 PaxDb:Q4W5Q8 EnsemblMetazoa:Y73E7A.9 GeneID:3565128
KEGG:cel:CELE_Y73E7A.9 UCSC:Y73E7A.9 CTD:3565128 WormBase:Y73E7A.9
eggNOG:NOG288984 HOGENOM:HOG000022238 InParanoid:Q4W5Q8
NextBio:955287 Uniprot:Q4W5Q8
Length = 558
Score = 214 (80.4 bits), Expect = 2.2e-37, Sum P(3) = 2.2e-37
Identities = 50/144 (34%), Positives = 78/144 (54%)
Query: 36 LVRRLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSAN 95
LV L LEGH GCVN + WN G+LL SGSDD ++ +W S R++ H++ TGH N
Sbjct: 27 LVDSLESFHMLEGHSGCVNTLRWNKTGALLASGSDDRNVKIWK-SGREI-HNLVTGHEGN 84
Query: 96 VFCTKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAV 155
VF +F+ + D+ +V+GA D V L ++ + + + + RVK++
Sbjct: 85 VFAVEFLQNSGDQKLVTGAADRVVALHDIEASTCKKWELDG------------RVKRICT 132
Query: 156 EVGNPHVVWSASE-DGTLRQHDFR 178
+P + W+A E D ++Q D R
Sbjct: 133 VEHDPTLFWAAVECDNGVQQFDTR 156
Score = 213 (80.0 bits), Expect = 2.2e-37, Sum P(3) = 2.2e-37
Identities = 42/103 (40%), Positives = 61/103 (59%)
Query: 602 NDRIPY-QPETVIDMKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGR 660
NDR PE V+D ++RY G N TDIK+A+F G R YI +GSD G +IW + T +
Sbjct: 412 NDRPELVAPEGVVDYQERYGGSTNHQTDIKEANFFGSRDQYIIAGSDCGHMYIWNRDTSK 471
Query: 661 LIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIWTPSASVP 703
+ + D+ ++N Q HP ++AT+GID+ I +W P P
Sbjct: 472 IQGIFEADDHILNICQPHPDQFMIATAGIDDDILLWQPILERP 514
Score = 101 (40.6 bits), Expect = 2.2e-37, Sum P(3) = 2.2e-37
Identities = 32/94 (34%), Positives = 48/94 (51%)
Query: 219 KSCDISSTRPHLLLVGGSDAFARLYDRRML--PPLTSCQKRMSPPPCVNYFCPMHLSEHG 276
KS +S RP+L++VG + RLYDRR L P LT F P+ + +
Sbjct: 176 KSVAVSEARPNLIVVGFDETAVRLYDRRNLNAPMLT--------------FSPLGANTY- 220
Query: 277 RSSLHLTHVTFSPNGEEVLLSYSGEH-VYLMDVN 309
+ H THV F+ G EV++++ G VY+ V+
Sbjct: 221 --AYHATHVAFNKRGTEVVVNHGGGGGVYVFSVD 252
Score = 68 (29.0 bits), Expect = 5.8e-34, Sum P(3) = 5.8e-34
Identities = 53/222 (23%), Positives = 85/222 (38%)
Query: 275 HGRSSLHLTHVTFSPNGEEVLLSYSGEHVYLMDVNHAGGRAMRYTVGDASKIMSFTPTLN 334
+ R +L+ +TFSP G +Y HV N G + G + F+
Sbjct: 200 YDRRNLNAPMLTFSPLGANTY-AYHATHVAF---NKRGTEVV-VNHGGGGGVYVFSVDA- 253
Query: 335 GLELQPPIHDFLQTNIRVRGE--VATGLGKCRMLVEIARNSLEEGKHPYYGIEACNEVL- 391
EL P D + + + E + +G L EI ++ E KH I+ ++++
Sbjct: 254 --ELDPKYMDRFHSVMELPREPVITSGALPYPDLREIGSTAIRE-KHFAKAIDFYSDLIY 310
Query: 392 -----EGHLSGIGPMLRHECLCIRAALLLKRKWKNDAQMAIRDCYNARRIDSSSFRAHLY 446
E H + C RA LL R+ + D +RDC A I H
Sbjct: 311 RNDDRESHQDHRAFL--SVCHSNRATALLLRRQRGDTYACVRDCIKALEI-------HRG 361
Query: 447 MSEALEQLCKYKEALD-FAIAAQCLDP-----SNSVMAEKVE 482
S+AL +L K ++ +A +C+ N EK+E
Sbjct: 362 NSKALLRLIKSFTTMEHIGLARKCVQKFKEWYPNDTAIEKME 403
Score = 38 (18.4 bits), Expect = 5.3e-13, Sum P(2) = 5.3e-13
Identities = 20/76 (26%), Positives = 30/76 (39%)
Query: 102 VPETSDELVVSGAGDAEVRLF---NLSR--FSGRGLDDNAITPSALYQCHTRRVKKLAVE 156
V E L+V G + VRL+ NL+ + L N A + +R ++ V
Sbjct: 180 VSEARPNLIVVGFDETAVRLYDRRNLNAPMLTFSPLGANTYAYHATHVAFNKRGTEVVVN 239
Query: 157 VGNPHVVWSASEDGTL 172
G V+ S D L
Sbjct: 240 HGGGGGVYVFSVDAEL 255
>DICTYBASE|DDB_G0269686 [details] [associations]
symbol:DDB_G0269686 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0269686 EMBL:AAFI02000005 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 KO:K11795 RefSeq:XP_646188.1
ProteinModelPortal:Q55DE3 EnsemblProtists:DDB0238180 GeneID:8617141
KEGG:ddi:DDB_G0269686 OMA:ECVNSIN ProtClustDB:CLSZ2729295
Uniprot:Q55DE3
Length = 895
Score = 236 (88.1 bits), Expect = 2.9e-37, Sum P(4) = 2.9e-37
Identities = 62/182 (34%), Positives = 101/182 (55%)
Query: 42 QERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKF 101
++ EL GH CVN+I++N GSL++SG DD + +W RK L ++ GHS NVF T F
Sbjct: 39 EKTELHGHNECVNSINFNDDGSLIVSGGDDETVRIWDVGKRKCLTTLY-GHSTNVFATNF 97
Query: 102 VPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPH 161
+ + V+SG DA++R +++ ++ T +Y+ H+++V KL+V P
Sbjct: 98 L-NNDNRKVISGGNDADIRYYDI--------ENQKCT---VYKHHSKKVLKLSVCPTQPQ 145
Query: 162 VVWSASEDGTLRQHDFR---QGSSCPP---AGSSHQECRNILLDLRCGAK-RSLADPPKQ 214
V S+S DG++R D R + + P A S++ R IL + G + R++A P +Q
Sbjct: 146 VFLSSSSDGSVRLFDVRLKYKDTEIQPIQTAPSNNDGYRAILPQVIGGGRGRTMALPLQQ 205
Query: 215 TL 216
L
Sbjct: 206 QL 207
Score = 220 (82.5 bits), Expect = 2.9e-37, Sum P(4) = 2.9e-37
Identities = 43/103 (41%), Positives = 65/103 (63%)
Query: 601 QNDRIPYQPETVIDMKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGR 660
+N+ P+ P+T KQ Y GH + T IK +F G +YI SGSDD + FIW+K++ +
Sbjct: 758 KNNSKPFLPKT---FKQVYSGHVSEQT-IKSVNFYGPNSEYIVSGSDDSKLFIWDKESAK 813
Query: 661 LIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIWTPSASVP 703
++++L G ++ VN V CHP + +ATSGID I +W P+ P
Sbjct: 814 IVRILEGHDSHVNSVVCHPNEPCIATSGIDPYICLWEPTKEYP 856
Score = 82 (33.9 bits), Expect = 2.9e-37, Sum P(4) = 2.9e-37
Identities = 30/111 (27%), Positives = 51/111 (45%)
Query: 198 LDLRCGAKRSLADPPKQTLSLKSCDISSTRPHLLLVGGSDAFARLYDRRMLPPLTSCQKR 257
L LR + S++ P K T+ S + + + SD RL+D+RM+P
Sbjct: 255 LPLRRSFRYSISIP-KTTIF--SVEYHPFDGYSFITASSDGTVRLFDQRMIP-------N 304
Query: 258 MSPPPCVNYFCPMHLSEHGRSSLHLTHVTFSPNGEEVLLSYSGEHVYLMDV 308
S VN + ++ S T FS NG E++++Y +++YL D+
Sbjct: 305 HSSESFVNIY--RNIEVPFPSEDEATGCAFSKNGNEIVVTYLNDNIYLYDL 353
Score = 55 (24.4 bits), Expect = 2.0e-14, Sum P(3) = 2.0e-14
Identities = 16/49 (32%), Positives = 22/49 (44%)
Query: 213 KQTLSLKSCDISSTRPHLLLVGGSDAFARLYDRRMLPPLTSCQKRMSPP 261
K+ L L C T+P + L SD RL+D R+ T Q + P
Sbjct: 132 KKVLKLSVCP---TQPQVFLSSSSDGSVRLFDVRLKYKDTEIQPIQTAP 177
Score = 40 (19.1 bits), Expect = 2.9e-37, Sum P(4) = 2.9e-37
Identities = 9/25 (36%), Positives = 16/25 (64%)
Query: 416 KRKWKNDAQMAIRDCYNARRIDSSS 440
K+K K D+ +++ C N+ I SS+
Sbjct: 486 KKKAKTDSDISLSSCSNSS-IGSSN 509
Score = 37 (18.1 bits), Expect = 1.4e-12, Sum P(3) = 1.4e-12
Identities = 8/14 (57%), Positives = 10/14 (71%)
Query: 165 SASEDGTLRQHDFR 178
+AS DGT+R D R
Sbjct: 287 TASSDGTVRLFDQR 300
Score = 37 (18.1 bits), Expect = 1.4e-12, Sum P(3) = 1.4e-12
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 231 LLVGGSDAFARLYD 244
++ GG+DA R YD
Sbjct: 105 VISGGNDADIRYYD 118
>ASPGD|ASPL0000058488 [details] [associations]
symbol:AN0287 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005829 "cytosol"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 EMBL:BN001308 OMA:GHITACK
EnsemblFungi:CADANIAT00002433 Uniprot:C8VUB4
Length = 1089
Score = 235 (87.8 bits), Expect = 2.5e-36, Sum P(3) = 2.5e-36
Identities = 43/80 (53%), Positives = 58/80 (72%)
Query: 619 YVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCH 678
Y GHCNV T +K A+F G +Y+ SGSD G FIWE+ T +L+ +L GD+ VVN VQ H
Sbjct: 915 YRGHCNVKT-VKDANFFGLNDEYVVSGSDSGHLFIWERDTCKLVNILKGDDEVVNVVQGH 973
Query: 679 PFDCVVATSGIDNTIKIWTP 698
P++ +A SGID+TIKI++P
Sbjct: 974 PYEPTIAASGIDDTIKIFSP 993
Score = 228 (85.3 bits), Expect = 2.5e-36, Sum P(3) = 2.5e-36
Identities = 54/152 (35%), Positives = 82/152 (53%)
Query: 10 SIYDMLDTRHT---DTRPDVNHSLQMHSSLVRRLSQERELEGHQGCVNAISWNSKGSLLI 66
S+YD + R T+ ++ + V L EL GH GCVNA+SW+ G LL
Sbjct: 4 SLYDRIWLREAGGGSTKANIR-GIYGSKEWVNDLDIVNELGGHTGCVNALSWSRSGRLLA 62
Query: 67 SGSDDTHINVWSY---SSRK---LLHSIETGHSANVFCTKFVPETSDELVVSGAGDAEVR 120
SGSDD H+N++SY SS L S+ TGH+ N+F F+P ++D+ +V+ AGD++VR
Sbjct: 63 SGSDDFHLNIYSYQPDSSTAPFALNTSVFTGHTGNIFSVAFMPHSNDQTLVTAAGDSQVR 122
Query: 121 LFNLSRFSGRGLDDNAITPSALYQCHTRRVKK 152
+F++ S R I P+ Q + +
Sbjct: 123 VFDIEYSSSRN-GSQGIPPAFANQARNPHLNR 153
Score = 133 (51.9 bits), Expect = 2.4e-24, Sum P(2) = 2.4e-24
Identities = 56/206 (27%), Positives = 93/206 (45%)
Query: 120 RLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHVVWSASEDGTLRQHDFRQ 179
R F +R+ G G N T + +Y+ H RVK++ E +P++ + SEDG +RQ D R
Sbjct: 153 RFFGNTRYLGVG---N--TNARIYRSHADRVKRIVTE-SSPYLFLTCSEDGEVRQWDLRL 206
Query: 180 GSSCPPAGSSHQECRNILLDLRCGAKR--SLADPP-----KQTLSLKSCDISSTRPHLLL 232
SS P + + R G S PP + + L + S ++PH +
Sbjct: 207 PSSAYPKPRGGL----LYMTQRVGEGHDDSNVPPPLISYKRHRIDLNTISCSPSQPHYIA 262
Query: 233 VGGSDAFARLYDRRMLP-PLTSCQKRMSPPPCVNYFCPMHLSEHGRSSLHLTHVTFSPNG 291
+GG+ L+DRRML +T+ + P + L G+++ + F+PNG
Sbjct: 263 LGGAHLHCFLHDRRMLGRDMTAERGDPGTSPGIGSGYDEELM--GQATRCVRR--FAPNG 318
Query: 292 EEVLLS-YSGEHVYLMDVNHAGGRAM 316
+ S Y G H+ +++A M
Sbjct: 319 KTRTKSRYKG-HITACKISNANPNEM 343
Score = 67 (28.6 bits), Expect = 2.5e-36, Sum P(3) = 2.5e-36
Identities = 16/48 (33%), Positives = 25/48 (52%)
Query: 263 CVNYFCPMHLSE-HGRSSLHLTHVTFS-PNGEEVLLSYSGEHVYLMDV 308
CV F P + R H+T S N E+++S+SG+H+Y D+
Sbjct: 310 CVRRFAPNGKTRTKSRYKGHITACKISNANPNEMIVSWSGDHIYSFDL 357
Score = 54 (24.1 bits), Expect = 1.4e-15, Sum P(3) = 1.4e-15
Identities = 35/157 (22%), Positives = 61/157 (38%)
Query: 121 LFNLSRFSGRGLDDNAITPSAL-YQCHTRRVKKLAVEVGNPHVVWSASEDGTLRQHDFRQ 179
L +++ G G DD+ + P + Y+ H + ++ PH + HD R
Sbjct: 218 LLYMTQRVGEGHDDSNVPPPLISYKRHRIDLNTISCSPSQPHYIALGGAHLHCFLHDRRM 277
Query: 180 ------------GSSCPPAGSSHQECRNILLDLRCGAKRSLADPPKQTLS-----LKSCD 222
G+S P GS + E + RC +R + +T S + +C
Sbjct: 278 LGRDMTAERGDPGTS-PGIGSGYDE-ELMGQATRC-VRRFAPNGKTRTKSRYKGHITACK 334
Query: 223 ISSTRPHLLLVGGSDAFARLYDRRMLPPLTSCQKRMS 259
IS+ P+ ++V S +D P S Q++ S
Sbjct: 335 ISNANPNEMIVSWSGDHIYSFDLVRSPDALSTQEQQS 371
Score = 40 (19.1 bits), Expect = 6.5e-17, Sum P(3) = 6.5e-17
Identities = 30/124 (24%), Positives = 54/124 (43%)
Query: 4 FPFHDGSIYDMLDTRHTDTRPDVNHSLQMHSSLVRRLSQE--RELEGHQGCVNAISWNSK 61
F H G+I+ + H++ + V + S VR E G QG A + ++
Sbjct: 91 FTGHTGNIFSVAFMPHSNDQTLVTAA---GDSQVRVFDIEYSSSRNGSQGIPPAFANQAR 147
Query: 62 GSLLISGSDDT-HINVWSYSSRKLLHSIETGHSANVFCTKFVPETSDELVVSGAGDAEVR 120
L +T ++ V + ++R I H+ V + V E+S L ++ + D EVR
Sbjct: 148 NPHLNRFFGNTRYLGVGNTNAR-----IYRSHADRV--KRIVTESSPYLFLTCSEDGEVR 200
Query: 121 LFNL 124
++L
Sbjct: 201 QWDL 204
>TAIR|locus:2132796 [details] [associations]
symbol:AT4G35140 "AT4G35140" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002687 GenomeReviews:CT486007_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 KO:K11804 HOGENOM:HOG000243561 EMBL:AY120722
EMBL:BT000028 IPI:IPI00525689 RefSeq:NP_195240.2 UniGene:At.44855
ProteinModelPortal:Q8L862 SMR:Q8L862 PRIDE:Q8L862
EnsemblPlants:AT4G35140.1 GeneID:829666 KEGG:ath:AT4G35140
TAIR:At4g35140 eggNOG:NOG257676 InParanoid:Q8L862 OMA:IDPRNSN
PhylomeDB:Q8L862 ProtClustDB:CLSN2684761 Genevestigator:Q8L862
Uniprot:Q8L862
Length = 496
Score = 255 (94.8 bits), Expect = 4.4e-36, Sum P(2) = 4.4e-36
Identities = 54/144 (37%), Positives = 85/144 (59%)
Query: 35 SLVRRLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSA 94
+LV RL ++LE H+GCVN +S+N++G +LISGSDD + +W + + S +GH+
Sbjct: 44 NLVLRLEIYKKLEKHKGCVNTVSFNAEGDVLISGSDDRRVVLWDWQLGNVKLSFHSGHAN 103
Query: 95 NVFCTKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLA 154
NVF KF+P + D +V+ A D VR ++ L+ + + S L H R KL
Sbjct: 104 NVFQAKFMPFSDDRTIVTCAADGMVRRASI-------LEGDKVETSFL-GLHQGRAHKLC 155
Query: 155 VEVGNPHVVWSASEDGTLRQHDFR 178
+E GNPH+ ++ EDG +++ D R
Sbjct: 156 IEPGNPHIFYTCGEDGLVQRFDLR 179
Score = 211 (79.3 bits), Expect = 4.4e-36, Sum P(2) = 4.4e-36
Identities = 40/83 (48%), Positives = 56/83 (67%)
Query: 619 YVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCH 678
Y GH N T +K +F G R +Y+ SGSD GR FIW K+ G LI+++ D VVNC++ H
Sbjct: 327 YKGHKNCET-VKGVNFFGPRSEYVVSGSDCGRIFIWRKKGGELIRVMEADRHVVNCIEPH 385
Query: 679 PFDCVVATSGIDNTIKIWTPSAS 701
P V+A+SGI++ IK+WT A+
Sbjct: 386 PHIPVLASSGIESDIKVWTSKAA 408
Score = 158 (60.7 bits), Expect = 1.6e-25, Sum P(2) = 1.6e-25
Identities = 50/161 (31%), Positives = 80/161 (49%)
Query: 146 HTRRVKKLAVEVGNPHVVWSASEDGTLRQHDFRQGSSCPPAGSSHQECRNILLDLRCGAK 205
H R KL +E GNPH+ ++ EDG +++ D R + P + CR++ D R +
Sbjct: 147 HQGRAHKLCIEPGNPHIFYTCGEDGLVQRFDLR--TEAP---TELFTCRSV--DPR---R 196
Query: 206 RSLADPPKQTLSLKSCDISSTRPHLLLVGGSDAFARLYD-RRMLPPLTSCQKRMSPPPCV 264
R++ + L + I +L VGG + +ARLYD RR + R +
Sbjct: 197 RNM-----DAIQLNAIAIDPRNSNLFAVGGMEEYARLYDIRRFQGEGLNGFTRAA----- 246
Query: 265 NYFCPMHLSEHGRSSLHLTHVTFSPNGEEVLLSYSGEHVYL 305
++FCP HL G + +T + FS E +L+SY+ E +YL
Sbjct: 247 DHFCPPHLI--GNEDVGITGLAFSEQSE-LLVSYNDEFIYL 284
Score = 56 (24.8 bits), Expect = 7.1e-15, Sum P(2) = 7.1e-15
Identities = 15/43 (34%), Positives = 22/43 (51%)
Query: 103 PETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQC 145
P S+ V G + RL+++ RF G GL N T +A + C
Sbjct: 211 PRNSNLFAVGGM-EEYARLYDIRRFQGEGL--NGFTRAADHFC 250
>GENEDB_PFALCIPARUM|PF14_0262 [details] [associations]
symbol:PF14_0262 "hypothetical protein"
species:5833 "Plasmodium falciparum" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AE014187 RefSeq:XP_001348436.2
ProteinModelPortal:Q8ILI1 EnsemblProtists:PF14_0262:mRNA
GeneID:811844 KEGG:pfa:PF14_0262 EuPathDB:PlasmoDB:PF3D7_1428400
Uniprot:Q8ILI1
Length = 1990
Score = 215 (80.7 bits), Expect = 2.3e-33, Sum P(3) = 2.3e-33
Identities = 57/215 (26%), Positives = 107/215 (49%)
Query: 10 SIY-DMLDTRHTDTRPDVNH-SLQMHSSLVRRLSQERELEGHQGCVNAISWNSKGSLLIS 67
++Y D++ ++ + H ++Q + + RL L GH VN + WN LL S
Sbjct: 10 NVYNDIIKLKYNKNYSNYIHQNVQSNKFFISRLKNTMTLNGHTSFVNRLKWNDDNHLLAS 69
Query: 68 GSDDTHINVW---SYSSR-KLLHSIETGHSANVFCTKFVPETSDELVVSGAGDAEVRLFN 123
D + +W SY+ + K + T H +++F F+ ++ V++GA D +V ++N
Sbjct: 70 CGSDRKVLIWNINSYNYKPKPKCIVNTNHVSSIFGVSFI---DNDFVITGAMDKQVHVYN 126
Query: 124 LSRFSGRGLDDNAITPSALYQCHTRRVKKLA-VEVGNPHVVWSASEDGTLRQHDFRQGSS 182
+ DD+ ++ CH + V+ +A + N ++ WS+S+DGT+RQ+D R+
Sbjct: 127 IH-------DDSY---KVIHNCHLKTVRHIATIPKENKNIFWSSSDDGTVRQYDTREKHI 176
Query: 183 CPPAGSSHQECRNILLDL-RCGAKRSLADPPKQTL 216
C CRN++++L R G + P++ L
Sbjct: 177 CVSPN-----CRNVIINLNRIGDQYYTQRNPEERL 206
Score = 170 (64.9 bits), Expect = 2.3e-33, Sum P(3) = 2.3e-33
Identities = 32/86 (37%), Positives = 51/86 (59%)
Query: 617 QRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQ 676
+R++GH N ++K+ +F D I + SD+G + W + G+L+ ++ VNCVQ
Sbjct: 1882 KRFLGHSNTAWEMKELAFWND--DVILAASDNGEVYFWSIKDGKLLNVIRSQARHVNCVQ 1939
Query: 677 CHPFDCVVATSGIDNTIKIWTPSASV 702
HP +ATSG++N IKIW P +V
Sbjct: 1940 VHPQGTCLATSGLENYIKIWKPHDTV 1965
Score = 127 (49.8 bits), Expect = 2.3e-33, Sum P(3) = 2.3e-33
Identities = 62/233 (26%), Positives = 109/233 (46%)
Query: 233 VGGSDAFARLYDRRMLPPLTSCQKRMSPPPCV--NYFCPMHL----SEHG--RSSLHL-- 282
V +D +R+YDRRML S ++M+ C+ + + P HL E R + HL
Sbjct: 256 VCSNDMLSRVYDRRMLGKF-SLNEKMTLRSCIPSDTYYPKHLWNYIDEESDFRINYHLFY 314
Query: 283 -THVTFSPNGEEVLLSYSGEHVYLMD-VNHAGGRAMRYTVGDASKIMSFTPTLNGLELQP 340
T + +S NG+ + ++Y+ EHVYL D +N R++ Y + D + + + L P
Sbjct: 315 STDLCWSNNGKYLGVTYNTEHVYLYDFLNKEEERSLNYNIIDNDTKFDYNKSFD--ILFP 372
Query: 341 PIHD---FL----QTNIRVR-GEVATGLGKCRMLVEIARNS-LEEGKHPYYGIEAC-NEV 390
P + ++ + N R R E ++ +I +++ L YY E N
Sbjct: 373 PYDNKDVYMYWNNKKNDRNRMKEYFDYNNNMSLIQDIEKSAILAYDNKEYYKAEYLYNNC 432
Query: 391 LEGHLSGIGPMLRHECLCIRAALLLKRKWKNDAQMAIRDCYNARRIDSSSFRA 443
L +LS +R C A +L++RK +ND +A + A ++D + ++A
Sbjct: 433 L--NLSR-NKNIRKILYCNLAMVLIQRKARNDGYLAEQYALEALKLDPNYYKA 482
Score = 38 (18.4 bits), Expect = 3.7e-24, Sum P(3) = 3.7e-24
Identities = 6/11 (54%), Positives = 7/11 (63%)
Query: 372 NSLEEGKHPYY 382
N E+ K PYY
Sbjct: 544 NDTEDSKQPYY 554
>UNIPROTKB|Q8ILI1 [details] [associations]
symbol:PF14_0262 "Putative uncharacterized protein"
species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AE014187 RefSeq:XP_001348436.2
ProteinModelPortal:Q8ILI1 EnsemblProtists:PF14_0262:mRNA
GeneID:811844 KEGG:pfa:PF14_0262 EuPathDB:PlasmoDB:PF3D7_1428400
Uniprot:Q8ILI1
Length = 1990
Score = 215 (80.7 bits), Expect = 2.3e-33, Sum P(3) = 2.3e-33
Identities = 57/215 (26%), Positives = 107/215 (49%)
Query: 10 SIY-DMLDTRHTDTRPDVNH-SLQMHSSLVRRLSQERELEGHQGCVNAISWNSKGSLLIS 67
++Y D++ ++ + H ++Q + + RL L GH VN + WN LL S
Sbjct: 10 NVYNDIIKLKYNKNYSNYIHQNVQSNKFFISRLKNTMTLNGHTSFVNRLKWNDDNHLLAS 69
Query: 68 GSDDTHINVW---SYSSR-KLLHSIETGHSANVFCTKFVPETSDELVVSGAGDAEVRLFN 123
D + +W SY+ + K + T H +++F F+ ++ V++GA D +V ++N
Sbjct: 70 CGSDRKVLIWNINSYNYKPKPKCIVNTNHVSSIFGVSFI---DNDFVITGAMDKQVHVYN 126
Query: 124 LSRFSGRGLDDNAITPSALYQCHTRRVKKLA-VEVGNPHVVWSASEDGTLRQHDFRQGSS 182
+ DD+ ++ CH + V+ +A + N ++ WS+S+DGT+RQ+D R+
Sbjct: 127 IH-------DDSY---KVIHNCHLKTVRHIATIPKENKNIFWSSSDDGTVRQYDTREKHI 176
Query: 183 CPPAGSSHQECRNILLDL-RCGAKRSLADPPKQTL 216
C CRN++++L R G + P++ L
Sbjct: 177 CVSPN-----CRNVIINLNRIGDQYYTQRNPEERL 206
Score = 170 (64.9 bits), Expect = 2.3e-33, Sum P(3) = 2.3e-33
Identities = 32/86 (37%), Positives = 51/86 (59%)
Query: 617 QRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQ 676
+R++GH N ++K+ +F D I + SD+G + W + G+L+ ++ VNCVQ
Sbjct: 1882 KRFLGHSNTAWEMKELAFWND--DVILAASDNGEVYFWSIKDGKLLNVIRSQARHVNCVQ 1939
Query: 677 CHPFDCVVATSGIDNTIKIWTPSASV 702
HP +ATSG++N IKIW P +V
Sbjct: 1940 VHPQGTCLATSGLENYIKIWKPHDTV 1965
Score = 127 (49.8 bits), Expect = 2.3e-33, Sum P(3) = 2.3e-33
Identities = 62/233 (26%), Positives = 109/233 (46%)
Query: 233 VGGSDAFARLYDRRMLPPLTSCQKRMSPPPCV--NYFCPMHL----SEHG--RSSLHL-- 282
V +D +R+YDRRML S ++M+ C+ + + P HL E R + HL
Sbjct: 256 VCSNDMLSRVYDRRMLGKF-SLNEKMTLRSCIPSDTYYPKHLWNYIDEESDFRINYHLFY 314
Query: 283 -THVTFSPNGEEVLLSYSGEHVYLMD-VNHAGGRAMRYTVGDASKIMSFTPTLNGLELQP 340
T + +S NG+ + ++Y+ EHVYL D +N R++ Y + D + + + L P
Sbjct: 315 STDLCWSNNGKYLGVTYNTEHVYLYDFLNKEEERSLNYNIIDNDTKFDYNKSFD--ILFP 372
Query: 341 PIHD---FL----QTNIRVR-GEVATGLGKCRMLVEIARNS-LEEGKHPYYGIEAC-NEV 390
P + ++ + N R R E ++ +I +++ L YY E N
Sbjct: 373 PYDNKDVYMYWNNKKNDRNRMKEYFDYNNNMSLIQDIEKSAILAYDNKEYYKAEYLYNNC 432
Query: 391 LEGHLSGIGPMLRHECLCIRAALLLKRKWKNDAQMAIRDCYNARRIDSSSFRA 443
L +LS +R C A +L++RK +ND +A + A ++D + ++A
Sbjct: 433 L--NLSR-NKNIRKILYCNLAMVLIQRKARNDGYLAEQYALEALKLDPNYYKA 482
Score = 38 (18.4 bits), Expect = 3.7e-24, Sum P(3) = 3.7e-24
Identities = 6/11 (54%), Positives = 7/11 (63%)
Query: 372 NSLEEGKHPYY 382
N E+ K PYY
Sbjct: 544 NDTEDSKQPYY 554
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 162 (62.1 bits), Expect = 3.6e-19, Sum P(3) = 3.6e-19
Identities = 31/82 (37%), Positives = 55/82 (67%)
Query: 43 ERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFV 102
E+ + GH+ ++ ++W+S +LL+S SDD + +W SS K L +++ GHS VFC F
Sbjct: 54 EKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLK-GHSNYVFCCNFN 112
Query: 103 PETSDELVVSGAGDAEVRLFNL 124
P+++ L+VSG+ D VR++++
Sbjct: 113 PQSN--LIVSGSFDESVRIWDV 132
Score = 133 (51.9 bits), Expect = 3.6e-19, Sum P(3) = 3.6e-19
Identities = 30/80 (37%), Positives = 45/80 (56%)
Query: 619 YVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCH 678
Y GH N I A+F G +I SGS+D +IW QT +++ L G VV CH
Sbjct: 226 YTGHKNEKYCIF-ANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACH 284
Query: 679 PFDCVVATSGIDN--TIKIW 696
P + ++A++ ++N TIK+W
Sbjct: 285 PTENIIASAALENDKTIKLW 304
Score = 102 (41.0 bits), Expect = 8.5e-12, Sum P(2) = 8.5e-12
Identities = 35/137 (25%), Positives = 65/137 (47%)
Query: 44 RELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP 103
+ L+GH V ++N + +L++SGS D + +W + K L ++ HS V F
Sbjct: 97 KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPA-HSDPVSAVHFNR 155
Query: 104 ETSDELVVSGAGDAEVRLFNLSRFSGRGL-----DDNAITPSALYQCHTRRVKKLAVEVG 158
+ S L+VS + D R+++ + SG+ L DDN + + + + LA +
Sbjct: 156 DGS--LIVSSSYDGLCRIWDTA--SGQCLKTLIDDDNPPVSFVKFSPNGKYI--LAATLD 209
Query: 159 NPHVVWSASEDGTLRQH 175
N +W S+ L+ +
Sbjct: 210 NTLKLWDYSKGKCLKTY 226
Score = 94 (38.1 bits), Expect = 2.4e-14, Sum P(2) = 2.4e-14
Identities = 22/71 (30%), Positives = 37/71 (52%)
Query: 627 TDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDE-AVVNCVQCHPFDCVVA 685
+D A + G I S S DG IW+ +G+ +K L+ D+ V+ V+ P +
Sbjct: 145 SDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYIL 204
Query: 686 TSGIDNTIKIW 696
+ +DNT+K+W
Sbjct: 205 AATLDNTLKLW 215
Score = 82 (33.9 bits), Expect = 1.8e-10, Sum P(3) = 1.8e-10
Identities = 26/88 (29%), Positives = 45/88 (51%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L GH V+++ ++ G L S S D I +W K +I +GH + V +
Sbjct: 15 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-SGHKLGI---SDVAWS 70
Query: 106 SDE-LVVSGAGDAEVRLFNLSRFSGRGL 132
SD L+VS + D ++++++S SG+ L
Sbjct: 71 SDSNLLVSASDDKTLKIWDVS--SGKCL 96
Score = 54 (24.1 bits), Expect = 3.3e-10, Sum P(2) = 3.3e-10
Identities = 17/78 (21%), Positives = 31/78 (39%)
Query: 625 VGTDIKQASFL--GQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDC 682
+ D SF+ G YI + + D +W+ G+ +K G + C+ + F
Sbjct: 184 IDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFAN-FSV 242
Query: 683 V----VATSGIDNTIKIW 696
+ + DN + IW
Sbjct: 243 TGGKWIVSGSEDNLVYIW 260
Score = 45 (20.9 bits), Expect = 3.6e-19, Sum P(3) = 3.6e-19
Identities = 12/39 (30%), Positives = 23/39 (58%)
Query: 282 LTHVTFSPNGEEVLLSYSGEHVYLMDVNHAGGRAMR-YT 319
++ V FSPNG+ +L + + L D ++ G+ ++ YT
Sbjct: 191 VSFVKFSPNGKYILAATLDNTLKLWD--YSKGKCLKTYT 227
Score = 45 (20.9 bits), Expect = 4.7e-06, Sum P(3) = 4.7e-06
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 260 PPPCV-NYFCPMHLSEHGRSSLHLTHVTFSPNGE 292
P P NY L+ H ++ ++ V FSPNGE
Sbjct: 2 PTPVKPNYALKFTLAGHTKA---VSSVKFSPNGE 32
Score = 40 (19.1 bits), Expect = 3.0e-06, Sum P(3) = 3.0e-06
Identities = 21/90 (23%), Positives = 41/90 (45%)
Query: 91 GHSANVFCTKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRV 150
GH+ V KF P + E + S + D ++++ + G+ + I+ H +
Sbjct: 17 GHTKAVSSVKFSP--NGEWLASSSADKLIKIWGA--YDGKF--EKTISG------HKLGI 64
Query: 151 KKLAVEVGNPHVVWSASEDGTLRQHDFRQG 180
+A + +++ SAS+D TL+ D G
Sbjct: 65 SDVAWS-SDSNLLVSASDDKTLKIWDVSSG 93
Score = 38 (18.4 bits), Expect = 4.7e-06, Sum P(3) = 4.7e-06
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 510 TGRVLSLSDIIYRSEANS--DASQD 532
+G L +SD+ + S++N AS D
Sbjct: 58 SGHKLGISDVAWSSDSNLLVSASDD 82
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 163 (62.4 bits), Expect = 6.8e-19, Sum P(3) = 6.8e-19
Identities = 32/82 (39%), Positives = 55/82 (67%)
Query: 43 ERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFV 102
E+ + GH+ ++ ++W+S LL+SGSDD + VW S+ K L +++ GHS VFC F
Sbjct: 107 EKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLK-GHSNYVFCCNFN 165
Query: 103 PETSDELVVSGAGDAEVRLFNL 124
P+++ L+VSG+ D VR++++
Sbjct: 166 PQSN--LIVSGSFDESVRIWDV 185
Score = 135 (52.6 bits), Expect = 6.8e-19, Sum P(3) = 6.8e-19
Identities = 29/80 (36%), Positives = 45/80 (56%)
Query: 619 YVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCH 678
Y GH N I A+F G +I SGS+D +IW Q+ +++ L G V C CH
Sbjct: 279 YTGHKNEKYCIF-ANFSVTGGKWIVSGSEDNMVYIWNLQSKEVVQKLQGHTDTVLCTACH 337
Query: 679 PFDCVVATSGIDN--TIKIW 696
P + ++A++ ++N TIK+W
Sbjct: 338 PTENIIASAALENDKTIKLW 357
Score = 101 (40.6 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 35/137 (25%), Positives = 65/137 (47%)
Query: 44 RELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP 103
+ L+GH V ++N + +L++SGS D + +W + K L ++ HS V F
Sbjct: 150 KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPA-HSDPVSAVHFNR 208
Query: 104 ETSDELVVSGAGDAEVRLFNLSRFSGRGL-----DDNAITPSALYQCHTRRVKKLAVEVG 158
+ S L+VS + D R+++ + SG+ L DDN + + + + LA +
Sbjct: 209 DGS--LIVSSSYDGLCRIWDTA--SGQCLKTLIDDDNPPVSFVKFSPNGKYI--LAATLD 262
Query: 159 NPHVVWSASEDGTLRQH 175
N +W S+ L+ +
Sbjct: 263 NTLKLWDYSKGKCLKTY 279
Score = 94 (38.1 bits), Expect = 4.6e-14, Sum P(2) = 4.6e-14
Identities = 22/71 (30%), Positives = 37/71 (52%)
Query: 627 TDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDE-AVVNCVQCHPFDCVVA 685
+D A + G I S S DG IW+ +G+ +K L+ D+ V+ V+ P +
Sbjct: 198 SDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYIL 257
Query: 686 TSGIDNTIKIW 696
+ +DNT+K+W
Sbjct: 258 AATLDNTLKLW 268
Score = 93 (37.8 bits), Expect = 2.3e-11, Sum P(3) = 2.3e-11
Identities = 40/148 (27%), Positives = 65/148 (43%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L GH V+A+ ++ G L S S D I +W K +I +GH + V +
Sbjct: 68 LAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-SGHKLGI---SDVAWS 123
Query: 106 SDE-LVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHVVW 164
SD L+VSG+ D ++++ LS +G+ L + ++ C+ L V
Sbjct: 124 SDSRLLVSGSDDKTLKVWELS--TGKSLKTLKGHSNYVFCCNFNPQSNLIV--------- 172
Query: 165 SASEDGTLRQHDFRQGSSCPPAGSSHQE 192
S S D ++R D R G C +H +
Sbjct: 173 SGSFDESVRIWDVRTGK-CLKTLPAHSD 199
Score = 54 (24.1 bits), Expect = 6.4e-10, Sum P(2) = 6.4e-10
Identities = 17/78 (21%), Positives = 31/78 (39%)
Query: 625 VGTDIKQASFL--GQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDC 682
+ D SF+ G YI + + D +W+ G+ +K G + C+ + F
Sbjct: 237 IDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFAN-FSV 295
Query: 683 V----VATSGIDNTIKIW 696
+ + DN + IW
Sbjct: 296 TGGKWIVSGSEDNMVYIW 313
Score = 45 (20.9 bits), Expect = 6.8e-19, Sum P(3) = 6.8e-19
Identities = 12/39 (30%), Positives = 23/39 (58%)
Query: 282 LTHVTFSPNGEEVLLSYSGEHVYLMDVNHAGGRAMR-YT 319
++ V FSPNG+ +L + + L D ++ G+ ++ YT
Sbjct: 244 VSFVKFSPNGKYILAATLDNTLKLWD--YSKGKCLKTYT 280
Score = 43 (20.2 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 265 NYFCPMHLSEHGRSSLHLTHVTFSPNGE 292
NY L+ H ++ ++ V FSPNGE
Sbjct: 61 NYTLKFTLAGHTKA---VSAVKFSPNGE 85
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 162 (62.1 bits), Expect = 7.7e-19, Sum P(3) = 7.7e-19
Identities = 31/82 (37%), Positives = 55/82 (67%)
Query: 43 ERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFV 102
E+ + GH+ ++ ++W+S +LL+S SDD + +W SS K L +++ GHS VFC F
Sbjct: 80 EKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLK-GHSNYVFCCNFN 138
Query: 103 PETSDELVVSGAGDAEVRLFNL 124
P+++ L+VSG+ D VR++++
Sbjct: 139 PQSN--LIVSGSFDESVRIWDV 158
Score = 133 (51.9 bits), Expect = 7.7e-19, Sum P(3) = 7.7e-19
Identities = 30/80 (37%), Positives = 45/80 (56%)
Query: 619 YVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCH 678
Y GH N I A+F G +I SGS+D +IW QT +++ L G VV CH
Sbjct: 252 YTGHKNEKYCIF-ANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACH 310
Query: 679 PFDCVVATSGIDN--TIKIW 696
P + ++A++ ++N TIK+W
Sbjct: 311 PTENIIASAALENDKTIKLW 330
Score = 102 (41.0 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 35/137 (25%), Positives = 65/137 (47%)
Query: 44 RELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP 103
+ L+GH V ++N + +L++SGS D + +W + K L ++ HS V F
Sbjct: 123 KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPA-HSDPVSAVHFNR 181
Query: 104 ETSDELVVSGAGDAEVRLFNLSRFSGRGL-----DDNAITPSALYQCHTRRVKKLAVEVG 158
+ S L+VS + D R+++ + SG+ L DDN + + + + LA +
Sbjct: 182 DGS--LIVSSSYDGLCRIWDTA--SGQCLKTLIDDDNPPVSFVKFSPNGKYI--LAATLD 235
Query: 159 NPHVVWSASEDGTLRQH 175
N +W S+ L+ +
Sbjct: 236 NTLKLWDYSKGKCLKTY 252
Score = 94 (38.1 bits), Expect = 4.0e-14, Sum P(2) = 4.0e-14
Identities = 22/71 (30%), Positives = 37/71 (52%)
Query: 627 TDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDE-AVVNCVQCHPFDCVVA 685
+D A + G I S S DG IW+ +G+ +K L+ D+ V+ V+ P +
Sbjct: 171 SDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYIL 230
Query: 686 TSGIDNTIKIW 696
+ +DNT+K+W
Sbjct: 231 AATLDNTLKLW 241
Score = 82 (33.9 bits), Expect = 3.1e-10, Sum P(3) = 3.1e-10
Identities = 26/88 (29%), Positives = 45/88 (51%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L GH V+++ ++ G L S S D I +W K +I +GH + V +
Sbjct: 41 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-SGHKLGI---SDVAWS 96
Query: 106 SDE-LVVSGAGDAEVRLFNLSRFSGRGL 132
SD L+VS + D ++++++S SG+ L
Sbjct: 97 SDSNLLVSASDDKTLKIWDVS--SGKCL 122
Score = 54 (24.1 bits), Expect = 5.5e-10, Sum P(2) = 5.5e-10
Identities = 17/78 (21%), Positives = 31/78 (39%)
Query: 625 VGTDIKQASFL--GQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDC 682
+ D SF+ G YI + + D +W+ G+ +K G + C+ + F
Sbjct: 210 IDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFAN-FSV 268
Query: 683 V----VATSGIDNTIKIW 696
+ + DN + IW
Sbjct: 269 TGGKWIVSGSEDNLVYIW 286
Score = 52 (23.4 bits), Expect = 1.6e-06, Sum P(3) = 1.6e-06
Identities = 16/48 (33%), Positives = 23/48 (47%)
Query: 246 RMLPPLTSCQKRMSPPPCV-NYFCPMHLSEHGRSSLHLTHVTFSPNGE 292
R P +S + P P NY L+ H ++ ++ V FSPNGE
Sbjct: 14 RAQPTPSSSATQSKPTPVKPNYALKFTLAGHTKA---VSSVKFSPNGE 58
Score = 45 (20.9 bits), Expect = 7.7e-19, Sum P(3) = 7.7e-19
Identities = 12/39 (30%), Positives = 23/39 (58%)
Query: 282 LTHVTFSPNGEEVLLSYSGEHVYLMDVNHAGGRAMR-YT 319
++ V FSPNG+ +L + + L D ++ G+ ++ YT
Sbjct: 217 VSFVKFSPNGKYILAATLDNTLKLWD--YSKGKCLKTYT 253
Score = 40 (19.1 bits), Expect = 5.0e-06, Sum P(3) = 5.0e-06
Identities = 21/90 (23%), Positives = 41/90 (45%)
Query: 91 GHSANVFCTKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRV 150
GH+ V KF P + E + S + D ++++ + G+ + I+ H +
Sbjct: 43 GHTKAVSSVKFSP--NGEWLASSSADKLIKIWGA--YDGKF--EKTISG------HKLGI 90
Query: 151 KKLAVEVGNPHVVWSASEDGTLRQHDFRQG 180
+A + +++ SAS+D TL+ D G
Sbjct: 91 SDVAWS-SDSNLLVSASDDKTLKIWDVSSG 119
Score = 38 (18.4 bits), Expect = 1.6e-06, Sum P(3) = 1.6e-06
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 510 TGRVLSLSDIIYRSEANS--DASQD 532
+G L +SD+ + S++N AS D
Sbjct: 84 SGHKLGISDVAWSSDSNLLVSASDD 108
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 162 (62.1 bits), Expect = 7.7e-19, Sum P(3) = 7.7e-19
Identities = 31/82 (37%), Positives = 55/82 (67%)
Query: 43 ERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFV 102
E+ + GH+ ++ ++W+S +LL+S SDD + +W SS K L +++ GHS VFC F
Sbjct: 80 EKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLK-GHSNYVFCCNFN 138
Query: 103 PETSDELVVSGAGDAEVRLFNL 124
P+++ L+VSG+ D VR++++
Sbjct: 139 PQSN--LIVSGSFDESVRIWDV 158
Score = 133 (51.9 bits), Expect = 7.7e-19, Sum P(3) = 7.7e-19
Identities = 30/80 (37%), Positives = 45/80 (56%)
Query: 619 YVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCH 678
Y GH N I A+F G +I SGS+D +IW QT +++ L G VV CH
Sbjct: 252 YTGHKNEKYCIF-ANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACH 310
Query: 679 PFDCVVATSGIDN--TIKIW 696
P + ++A++ ++N TIK+W
Sbjct: 311 PTENIIASAALENDKTIKLW 330
Score = 102 (41.0 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 35/137 (25%), Positives = 65/137 (47%)
Query: 44 RELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP 103
+ L+GH V ++N + +L++SGS D + +W + K L ++ HS V F
Sbjct: 123 KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPA-HSDPVSAVHFNR 181
Query: 104 ETSDELVVSGAGDAEVRLFNLSRFSGRGL-----DDNAITPSALYQCHTRRVKKLAVEVG 158
+ S L+VS + D R+++ + SG+ L DDN + + + + LA +
Sbjct: 182 DGS--LIVSSSYDGLCRIWDTA--SGQCLKTLIDDDNPPVSFVKFSPNGKYI--LAATLD 235
Query: 159 NPHVVWSASEDGTLRQH 175
N +W S+ L+ +
Sbjct: 236 NTLKLWDYSKGKCLKTY 252
Score = 94 (38.1 bits), Expect = 4.0e-14, Sum P(2) = 4.0e-14
Identities = 22/71 (30%), Positives = 37/71 (52%)
Query: 627 TDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDE-AVVNCVQCHPFDCVVA 685
+D A + G I S S DG IW+ +G+ +K L+ D+ V+ V+ P +
Sbjct: 171 SDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYIL 230
Query: 686 TSGIDNTIKIW 696
+ +DNT+K+W
Sbjct: 231 AATLDNTLKLW 241
Score = 82 (33.9 bits), Expect = 3.1e-10, Sum P(3) = 3.1e-10
Identities = 26/88 (29%), Positives = 45/88 (51%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L GH V+++ ++ G L S S D I +W K +I +GH + V +
Sbjct: 41 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-SGHKLGI---SDVAWS 96
Query: 106 SDE-LVVSGAGDAEVRLFNLSRFSGRGL 132
SD L+VS + D ++++++S SG+ L
Sbjct: 97 SDSNLLVSASDDKTLKIWDVS--SGKCL 122
Score = 54 (24.1 bits), Expect = 5.5e-10, Sum P(2) = 5.5e-10
Identities = 17/78 (21%), Positives = 31/78 (39%)
Query: 625 VGTDIKQASFL--GQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDC 682
+ D SF+ G YI + + D +W+ G+ +K G + C+ + F
Sbjct: 210 IDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFAN-FSV 268
Query: 683 V----VATSGIDNTIKIW 696
+ + DN + IW
Sbjct: 269 TGGKWIVSGSEDNLVYIW 286
Score = 52 (23.4 bits), Expect = 1.6e-06, Sum P(3) = 1.6e-06
Identities = 16/48 (33%), Positives = 23/48 (47%)
Query: 246 RMLPPLTSCQKRMSPPPCV-NYFCPMHLSEHGRSSLHLTHVTFSPNGE 292
R P +S + P P NY L+ H ++ ++ V FSPNGE
Sbjct: 14 RAQPTPSSSATQSKPTPVKPNYALKFTLAGHTKA---VSSVKFSPNGE 58
Score = 45 (20.9 bits), Expect = 7.7e-19, Sum P(3) = 7.7e-19
Identities = 12/39 (30%), Positives = 23/39 (58%)
Query: 282 LTHVTFSPNGEEVLLSYSGEHVYLMDVNHAGGRAMR-YT 319
++ V FSPNG+ +L + + L D ++ G+ ++ YT
Sbjct: 217 VSFVKFSPNGKYILAATLDNTLKLWD--YSKGKCLKTYT 253
Score = 40 (19.1 bits), Expect = 5.0e-06, Sum P(3) = 5.0e-06
Identities = 21/90 (23%), Positives = 41/90 (45%)
Query: 91 GHSANVFCTKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRV 150
GH+ V KF P + E + S + D ++++ + G+ + I+ H +
Sbjct: 43 GHTKAVSSVKFSP--NGEWLASSSADKLIKIWGA--YDGKF--EKTISG------HKLGI 90
Query: 151 KKLAVEVGNPHVVWSASEDGTLRQHDFRQG 180
+A + +++ SAS+D TL+ D G
Sbjct: 91 SDVAWS-SDSNLLVSASDDKTLKIWDVSSG 119
Score = 38 (18.4 bits), Expect = 1.6e-06, Sum P(3) = 1.6e-06
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 510 TGRVLSLSDIIYRSEANS--DASQD 532
+G L +SD+ + S++N AS D
Sbjct: 84 SGHKLGISDVAWSSDSNLLVSASDD 108
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 162 (62.1 bits), Expect = 7.7e-19, Sum P(3) = 7.7e-19
Identities = 31/82 (37%), Positives = 55/82 (67%)
Query: 43 ERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFV 102
E+ + GH+ ++ ++W+S +LL+S SDD + +W SS K L +++ GHS VFC F
Sbjct: 80 EKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLK-GHSNYVFCCNFN 138
Query: 103 PETSDELVVSGAGDAEVRLFNL 124
P+++ L+VSG+ D VR++++
Sbjct: 139 PQSN--LIVSGSFDESVRIWDV 158
Score = 133 (51.9 bits), Expect = 7.7e-19, Sum P(3) = 7.7e-19
Identities = 30/80 (37%), Positives = 45/80 (56%)
Query: 619 YVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCH 678
Y GH N I A+F G +I SGS+D +IW QT +++ L G VV CH
Sbjct: 252 YTGHKNEKYCIF-ANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACH 310
Query: 679 PFDCVVATSGIDN--TIKIW 696
P + ++A++ ++N TIK+W
Sbjct: 311 PTENIIASAALENDKTIKLW 330
Score = 102 (41.0 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 35/137 (25%), Positives = 65/137 (47%)
Query: 44 RELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP 103
+ L+GH V ++N + +L++SGS D + +W + K L ++ HS V F
Sbjct: 123 KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPA-HSDPVSAVHFNR 181
Query: 104 ETSDELVVSGAGDAEVRLFNLSRFSGRGL-----DDNAITPSALYQCHTRRVKKLAVEVG 158
+ S L+VS + D R+++ + SG+ L DDN + + + + LA +
Sbjct: 182 DGS--LIVSSSYDGLCRIWDTA--SGQCLKTLIDDDNPPVSFVKFSPNGKYI--LAATLD 235
Query: 159 NPHVVWSASEDGTLRQH 175
N +W S+ L+ +
Sbjct: 236 NTLKLWDYSKGKCLKTY 252
Score = 94 (38.1 bits), Expect = 4.0e-14, Sum P(2) = 4.0e-14
Identities = 22/71 (30%), Positives = 37/71 (52%)
Query: 627 TDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDE-AVVNCVQCHPFDCVVA 685
+D A + G I S S DG IW+ +G+ +K L+ D+ V+ V+ P +
Sbjct: 171 SDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYIL 230
Query: 686 TSGIDNTIKIW 696
+ +DNT+K+W
Sbjct: 231 AATLDNTLKLW 241
Score = 82 (33.9 bits), Expect = 3.1e-10, Sum P(3) = 3.1e-10
Identities = 26/88 (29%), Positives = 45/88 (51%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L GH V+++ ++ G L S S D I +W K +I +GH + V +
Sbjct: 41 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-SGHKLGI---SDVAWS 96
Query: 106 SDE-LVVSGAGDAEVRLFNLSRFSGRGL 132
SD L+VS + D ++++++S SG+ L
Sbjct: 97 SDSNLLVSASDDKTLKIWDVS--SGKCL 122
Score = 54 (24.1 bits), Expect = 5.5e-10, Sum P(2) = 5.5e-10
Identities = 17/78 (21%), Positives = 31/78 (39%)
Query: 625 VGTDIKQASFL--GQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDC 682
+ D SF+ G YI + + D +W+ G+ +K G + C+ + F
Sbjct: 210 IDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFAN-FSV 268
Query: 683 V----VATSGIDNTIKIW 696
+ + DN + IW
Sbjct: 269 TGGKWIVSGSEDNLVYIW 286
Score = 52 (23.4 bits), Expect = 1.6e-06, Sum P(3) = 1.6e-06
Identities = 16/48 (33%), Positives = 23/48 (47%)
Query: 246 RMLPPLTSCQKRMSPPPCV-NYFCPMHLSEHGRSSLHLTHVTFSPNGE 292
R P +S + P P NY L+ H ++ ++ V FSPNGE
Sbjct: 14 RAQPTPSSSATQSKPTPVKPNYALKFTLAGHTKA---VSSVKFSPNGE 58
Score = 45 (20.9 bits), Expect = 7.7e-19, Sum P(3) = 7.7e-19
Identities = 12/39 (30%), Positives = 23/39 (58%)
Query: 282 LTHVTFSPNGEEVLLSYSGEHVYLMDVNHAGGRAMR-YT 319
++ V FSPNG+ +L + + L D ++ G+ ++ YT
Sbjct: 217 VSFVKFSPNGKYILAATLDNTLKLWD--YSKGKCLKTYT 253
Score = 40 (19.1 bits), Expect = 5.0e-06, Sum P(3) = 5.0e-06
Identities = 21/90 (23%), Positives = 41/90 (45%)
Query: 91 GHSANVFCTKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRV 150
GH+ V KF P + E + S + D ++++ + G+ + I+ H +
Sbjct: 43 GHTKAVSSVKFSP--NGEWLASSSADKLIKIWGA--YDGKF--EKTISG------HKLGI 90
Query: 151 KKLAVEVGNPHVVWSASEDGTLRQHDFRQG 180
+A + +++ SAS+D TL+ D G
Sbjct: 91 SDVAWS-SDSNLLVSASDDKTLKIWDVSSG 119
Score = 38 (18.4 bits), Expect = 1.6e-06, Sum P(3) = 1.6e-06
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 510 TGRVLSLSDIIYRSEANS--DASQD 532
+G L +SD+ + S++N AS D
Sbjct: 84 SGHKLGISDVAWSSDSNLLVSASDD 108
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 162 (62.1 bits), Expect = 7.7e-19, Sum P(3) = 7.7e-19
Identities = 31/82 (37%), Positives = 55/82 (67%)
Query: 43 ERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFV 102
E+ + GH+ ++ ++W+S +LL+S SDD + +W SS K L +++ GHS VFC F
Sbjct: 80 EKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLK-GHSNYVFCCNFN 138
Query: 103 PETSDELVVSGAGDAEVRLFNL 124
P+++ L+VSG+ D VR++++
Sbjct: 139 PQSN--LIVSGSFDESVRIWDV 158
Score = 133 (51.9 bits), Expect = 7.7e-19, Sum P(3) = 7.7e-19
Identities = 30/80 (37%), Positives = 45/80 (56%)
Query: 619 YVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCH 678
Y GH N I A+F G +I SGS+D +IW QT +++ L G VV CH
Sbjct: 252 YTGHKNEKYCIF-ANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACH 310
Query: 679 PFDCVVATSGIDN--TIKIW 696
P + ++A++ ++N TIK+W
Sbjct: 311 PTENIIASAALENDKTIKLW 330
Score = 102 (41.0 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 35/137 (25%), Positives = 65/137 (47%)
Query: 44 RELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP 103
+ L+GH V ++N + +L++SGS D + +W + K L ++ HS V F
Sbjct: 123 KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPA-HSDPVSAVHFNR 181
Query: 104 ETSDELVVSGAGDAEVRLFNLSRFSGRGL-----DDNAITPSALYQCHTRRVKKLAVEVG 158
+ S L+VS + D R+++ + SG+ L DDN + + + + LA +
Sbjct: 182 DGS--LIVSSSYDGLCRIWDTA--SGQCLKTLIDDDNPPVSFVKFSPNGKYI--LAATLD 235
Query: 159 NPHVVWSASEDGTLRQH 175
N +W S+ L+ +
Sbjct: 236 NTLKLWDYSKGKCLKTY 252
Score = 94 (38.1 bits), Expect = 4.0e-14, Sum P(2) = 4.0e-14
Identities = 22/71 (30%), Positives = 37/71 (52%)
Query: 627 TDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDE-AVVNCVQCHPFDCVVA 685
+D A + G I S S DG IW+ +G+ +K L+ D+ V+ V+ P +
Sbjct: 171 SDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYIL 230
Query: 686 TSGIDNTIKIW 696
+ +DNT+K+W
Sbjct: 231 AATLDNTLKLW 241
Score = 82 (33.9 bits), Expect = 3.1e-10, Sum P(3) = 3.1e-10
Identities = 26/88 (29%), Positives = 45/88 (51%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L GH V+++ ++ G L S S D I +W K +I +GH + V +
Sbjct: 41 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-SGHKLGI---SDVAWS 96
Query: 106 SDE-LVVSGAGDAEVRLFNLSRFSGRGL 132
SD L+VS + D ++++++S SG+ L
Sbjct: 97 SDSNLLVSASDDKTLKIWDVS--SGKCL 122
Score = 54 (24.1 bits), Expect = 5.5e-10, Sum P(2) = 5.5e-10
Identities = 17/78 (21%), Positives = 31/78 (39%)
Query: 625 VGTDIKQASFL--GQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDC 682
+ D SF+ G YI + + D +W+ G+ +K G + C+ + F
Sbjct: 210 IDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFAN-FSV 268
Query: 683 V----VATSGIDNTIKIW 696
+ + DN + IW
Sbjct: 269 TGGKWIVSGSEDNLVYIW 286
Score = 52 (23.4 bits), Expect = 1.6e-06, Sum P(3) = 1.6e-06
Identities = 16/48 (33%), Positives = 23/48 (47%)
Query: 246 RMLPPLTSCQKRMSPPPCV-NYFCPMHLSEHGRSSLHLTHVTFSPNGE 292
R P +S + P P NY L+ H ++ ++ V FSPNGE
Sbjct: 14 RAQPTPSSSATQSKPTPVKPNYALKFTLAGHTKA---VSSVKFSPNGE 58
Score = 45 (20.9 bits), Expect = 7.7e-19, Sum P(3) = 7.7e-19
Identities = 12/39 (30%), Positives = 23/39 (58%)
Query: 282 LTHVTFSPNGEEVLLSYSGEHVYLMDVNHAGGRAMR-YT 319
++ V FSPNG+ +L + + L D ++ G+ ++ YT
Sbjct: 217 VSFVKFSPNGKYILAATLDNTLKLWD--YSKGKCLKTYT 253
Score = 40 (19.1 bits), Expect = 5.0e-06, Sum P(3) = 5.0e-06
Identities = 21/90 (23%), Positives = 41/90 (45%)
Query: 91 GHSANVFCTKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRV 150
GH+ V KF P + E + S + D ++++ + G+ + I+ H +
Sbjct: 43 GHTKAVSSVKFSP--NGEWLASSSADKLIKIWGA--YDGKF--EKTISG------HKLGI 90
Query: 151 KKLAVEVGNPHVVWSASEDGTLRQHDFRQG 180
+A + +++ SAS+D TL+ D G
Sbjct: 91 SDVAWS-SDSNLLVSASDDKTLKIWDVSSG 119
Score = 38 (18.4 bits), Expect = 1.6e-06, Sum P(3) = 1.6e-06
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 510 TGRVLSLSDIIYRSEANS--DASQD 532
+G L +SD+ + S++N AS D
Sbjct: 84 SGHKLGISDVAWSSDSNLLVSASDD 108
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 162 (62.1 bits), Expect = 7.7e-19, Sum P(3) = 7.7e-19
Identities = 31/82 (37%), Positives = 55/82 (67%)
Query: 43 ERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFV 102
E+ + GH+ ++ ++W+S +LL+S SDD + +W SS K L +++ GHS VFC F
Sbjct: 80 EKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLK-GHSNYVFCCNFN 138
Query: 103 PETSDELVVSGAGDAEVRLFNL 124
P+++ L+VSG+ D VR++++
Sbjct: 139 PQSN--LIVSGSFDESVRIWDV 158
Score = 133 (51.9 bits), Expect = 7.7e-19, Sum P(3) = 7.7e-19
Identities = 30/80 (37%), Positives = 45/80 (56%)
Query: 619 YVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCH 678
Y GH N I A+F G +I SGS+D +IW QT +++ L G VV CH
Sbjct: 252 YTGHKNEKYCIF-ANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACH 310
Query: 679 PFDCVVATSGIDN--TIKIW 696
P + ++A++ ++N TIK+W
Sbjct: 311 PTENIIASAALENDKTIKLW 330
Score = 102 (41.0 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 35/137 (25%), Positives = 65/137 (47%)
Query: 44 RELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP 103
+ L+GH V ++N + +L++SGS D + +W + K L ++ HS V F
Sbjct: 123 KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPA-HSDPVSAVHFNR 181
Query: 104 ETSDELVVSGAGDAEVRLFNLSRFSGRGL-----DDNAITPSALYQCHTRRVKKLAVEVG 158
+ S L+VS + D R+++ + SG+ L DDN + + + + LA +
Sbjct: 182 DGS--LIVSSSYDGLCRIWDTA--SGQCLKTLIDDDNPPVSFVKFSPNGKYI--LAATLD 235
Query: 159 NPHVVWSASEDGTLRQH 175
N +W S+ L+ +
Sbjct: 236 NTLKLWDYSKGKCLKTY 252
Score = 94 (38.1 bits), Expect = 4.0e-14, Sum P(2) = 4.0e-14
Identities = 22/71 (30%), Positives = 37/71 (52%)
Query: 627 TDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDE-AVVNCVQCHPFDCVVA 685
+D A + G I S S DG IW+ +G+ +K L+ D+ V+ V+ P +
Sbjct: 171 SDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYIL 230
Query: 686 TSGIDNTIKIW 696
+ +DNT+K+W
Sbjct: 231 AATLDNTLKLW 241
Score = 82 (33.9 bits), Expect = 3.1e-10, Sum P(3) = 3.1e-10
Identities = 26/88 (29%), Positives = 45/88 (51%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L GH V+++ ++ G L S S D I +W K +I +GH + V +
Sbjct: 41 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-SGHKLGI---SDVAWS 96
Query: 106 SDE-LVVSGAGDAEVRLFNLSRFSGRGL 132
SD L+VS + D ++++++S SG+ L
Sbjct: 97 SDSNLLVSASDDKTLKIWDVS--SGKCL 122
Score = 54 (24.1 bits), Expect = 5.5e-10, Sum P(2) = 5.5e-10
Identities = 17/78 (21%), Positives = 31/78 (39%)
Query: 625 VGTDIKQASFL--GQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDC 682
+ D SF+ G YI + + D +W+ G+ +K G + C+ + F
Sbjct: 210 IDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFAN-FSV 268
Query: 683 V----VATSGIDNTIKIW 696
+ + DN + IW
Sbjct: 269 TGGKWIVSGSEDNLVYIW 286
Score = 50 (22.7 bits), Expect = 2.5e-06, Sum P(3) = 2.5e-06
Identities = 15/48 (31%), Positives = 23/48 (47%)
Query: 246 RMLPPLTSCQKRMSPPPCV-NYFCPMHLSEHGRSSLHLTHVTFSPNGE 292
R P ++ + P P NY L+ H ++ ++ V FSPNGE
Sbjct: 14 RAQPAPSAAATQSKPTPVKPNYALKFTLAGHTKA---VSSVKFSPNGE 58
Score = 45 (20.9 bits), Expect = 7.7e-19, Sum P(3) = 7.7e-19
Identities = 12/39 (30%), Positives = 23/39 (58%)
Query: 282 LTHVTFSPNGEEVLLSYSGEHVYLMDVNHAGGRAMR-YT 319
++ V FSPNG+ +L + + L D ++ G+ ++ YT
Sbjct: 217 VSFVKFSPNGKYILAATLDNTLKLWD--YSKGKCLKTYT 253
Score = 40 (19.1 bits), Expect = 5.0e-06, Sum P(3) = 5.0e-06
Identities = 21/90 (23%), Positives = 41/90 (45%)
Query: 91 GHSANVFCTKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRV 150
GH+ V KF P + E + S + D ++++ + G+ + I+ H +
Sbjct: 43 GHTKAVSSVKFSP--NGEWLASSSADKLIKIWGA--YDGKF--EKTISG------HKLGI 90
Query: 151 KKLAVEVGNPHVVWSASEDGTLRQHDFRQG 180
+A + +++ SAS+D TL+ D G
Sbjct: 91 SDVAWS-SDSNLLVSASDDKTLKIWDVSSG 119
Score = 38 (18.4 bits), Expect = 2.5e-06, Sum P(3) = 2.5e-06
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 510 TGRVLSLSDIIYRSEANS--DASQD 532
+G L +SD+ + S++N AS D
Sbjct: 84 SGHKLGISDVAWSSDSNLLVSASDD 108
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 162 (62.1 bits), Expect = 4.0e-18, Sum P(3) = 4.0e-18
Identities = 31/82 (37%), Positives = 55/82 (67%)
Query: 43 ERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFV 102
E+ + GH+ ++ ++W+S +LL+S SDD + +W SS K L +++ GHS VFC F
Sbjct: 80 EKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLK-GHSNYVFCCNFN 138
Query: 103 PETSDELVVSGAGDAEVRLFNL 124
P+++ L+VSG+ D VR++++
Sbjct: 139 PQSN--LIVSGSFDESVRIWDV 158
Score = 125 (49.1 bits), Expect = 4.0e-18, Sum P(3) = 4.0e-18
Identities = 25/67 (37%), Positives = 40/67 (59%)
Query: 632 ASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDN 691
A+F G +I SGS+D +IW QT +++ L G VV CHP + ++A++ ++N
Sbjct: 264 ANFSVTGGKWIVSGSEDNLVYIWNLQTKEVVQKLQGHTDVVISTACHPTENIIASAALEN 323
Query: 692 --TIKIW 696
TIK+W
Sbjct: 324 DKTIKLW 330
Score = 102 (41.0 bits), Expect = 9.8e-11, Sum P(2) = 9.8e-11
Identities = 35/137 (25%), Positives = 65/137 (47%)
Query: 44 RELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP 103
+ L+GH V ++N + +L++SGS D + +W + K L ++ HS V F
Sbjct: 123 KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPA-HSDPVSAVHFNR 181
Query: 104 ETSDELVVSGAGDAEVRLFNLSRFSGRGL-----DDNAITPSALYQCHTRRVKKLAVEVG 158
+ S L+VS + D R+++ + SG+ L DDN + + + + LA +
Sbjct: 182 DGS--LIVSSSYDGLCRIWDTA--SGQCLKTLIDDDNPPVSFVKFSPNGKYI--LAATLD 235
Query: 159 NPHVVWSASEDGTLRQH 175
N +W S+ L+ +
Sbjct: 236 NTLKLWDYSKGKCLKTY 252
Score = 94 (38.1 bits), Expect = 4.0e-14, Sum P(2) = 4.0e-14
Identities = 22/71 (30%), Positives = 37/71 (52%)
Query: 627 TDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDE-AVVNCVQCHPFDCVVA 685
+D A + G I S S DG IW+ +G+ +K L+ D+ V+ V+ P +
Sbjct: 171 SDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYIL 230
Query: 686 TSGIDNTIKIW 696
+ +DNT+K+W
Sbjct: 231 AATLDNTLKLW 241
Score = 82 (33.9 bits), Expect = 2.0e-09, Sum P(3) = 2.0e-09
Identities = 26/88 (29%), Positives = 45/88 (51%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L GH V+++ ++ G L S S D I +W K +I +GH + V +
Sbjct: 41 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-SGHKLGI---SDVAWS 96
Query: 106 SDE-LVVSGAGDAEVRLFNLSRFSGRGL 132
SD L+VS + D ++++++S SG+ L
Sbjct: 97 SDSNLLVSASDDKTLKIWDVS--SGKCL 122
Score = 49 (22.3 bits), Expect = 2.5e-05, Sum P(3) = 2.5e-05
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 252 TSCQKRMSPPPCV-NYFCPMHLSEHGRSSLHLTHVTFSPNGE 292
+S + P P NY L+ H ++ ++ V FSPNGE
Sbjct: 20 SSSNNQSKPAPVKPNYTLKFTLAGHTKA---VSSVKFSPNGE 58
Score = 46 (21.3 bits), Expect = 4.0e-18, Sum P(3) = 4.0e-18
Identities = 14/49 (28%), Positives = 25/49 (51%)
Query: 282 LTHVTFSPNGEEVLLSYSGEHVYLMDVNHAGGRAMR-YTVGDASKIMSF 329
++ V FSPNG+ +L + + L D ++ G+ ++ YT K F
Sbjct: 217 VSFVKFSPNGKYILAATLDNTLKLWD--YSKGKCLKTYTCHKNEKYCIF 263
Score = 40 (19.1 bits), Expect = 3.2e-05, Sum P(3) = 3.2e-05
Identities = 21/90 (23%), Positives = 41/90 (45%)
Query: 91 GHSANVFCTKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRV 150
GH+ V KF P + E + S + D ++++ + G+ + I+ H +
Sbjct: 43 GHTKAVSSVKFSP--NGEWLASSSADKLIKIWGA--YDGKF--EKTISG------HKLGI 90
Query: 151 KKLAVEVGNPHVVWSASEDGTLRQHDFRQG 180
+A + +++ SAS+D TL+ D G
Sbjct: 91 SDVAWS-SDSNLLVSASDDKTLKIWDVSSG 119
Score = 38 (18.4 bits), Expect = 2.5e-05, Sum P(3) = 2.5e-05
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 510 TGRVLSLSDIIYRSEANS--DASQD 532
+G L +SD+ + S++N AS D
Sbjct: 84 SGHKLGISDVAWSSDSNLLVSASDD 108
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 142 (55.0 bits), Expect = 2.6e-16, Sum P(3) = 2.6e-16
Identities = 44/138 (31%), Positives = 71/138 (51%)
Query: 43 ERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFV 102
++ L GH ++ ++W+S S L+S SDD + VW S K L +++ GHS VFC F
Sbjct: 74 KKTLYGHSLEISDVAWSSDSSRLVSASDDKTLKVWDMRSGKCLKTLK-GHSDFVFCCDFN 132
Query: 103 PETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHV 162
P ++ L+VSG+ D V+++ + +G+ L T SA H+ + + N +
Sbjct: 133 PPSN--LIVSGSFDESVKIWEVK--TGKCLK----TLSA----HSDPISAVNFNC-NGSL 179
Query: 163 VWSASEDGTLRQHDFRQG 180
+ S S DG R D G
Sbjct: 180 IVSGSYDGLCRIWDAASG 197
Score = 125 (49.1 bits), Expect = 2.6e-16, Sum P(3) = 2.6e-16
Identities = 28/81 (34%), Positives = 44/81 (54%)
Query: 619 YVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCH 678
Y GH N + ASF ++ SGS+D +IW QT +++ L G VV CH
Sbjct: 246 YTGHKNEKYCLF-ASFSVTGRKWVVSGSEDNMVYIWNLQTKEIVQRLQGHTDVVISAACH 304
Query: 679 PFDCVVATSGIDN--TIKIWT 697
P ++A++ ++N TIK+W+
Sbjct: 305 PTKNIIASAALENDKTIKVWS 325
Score = 99 (39.9 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 37/151 (24%), Positives = 67/151 (44%)
Query: 44 RELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP 103
+ L+GH V +N +L++SGS D + +W + K L ++ + HS + F
Sbjct: 117 KTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEVKTGKCLKTL-SAHSDPISAVNF-- 173
Query: 104 ETSDELVVSGAGDAEVRLFNLSRFSG---RGLDDNAITPSALYQCHTRRVKKLAVEVGNP 160
+ L+VSG+ D R+++ + SG R L D P + + N
Sbjct: 174 NCNGSLIVSGSYDGLCRIWDAA--SGQCLRTLADEGNPPVSFVKFSP-----------NG 220
Query: 161 HVVWSASEDGTLRQHDFRQGSSCPPAGSSHQ 191
+ +A+ D TL+ D+ +G C + H+
Sbjct: 221 KYILTATLDNTLKLWDYSRGR-CLKTYTGHK 250
Score = 67 (28.6 bits), Expect = 1.9e-08, Sum P(3) = 1.9e-08
Identities = 22/90 (24%), Positives = 46/90 (51%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVW-SYSS--RKLLHSIETGHSANVFCTKFV 102
L GH ++++ ++ G L S + D I +W +Y +K L+ GHS + +
Sbjct: 35 LAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLY----GHSLEISDVAWS 90
Query: 103 PETSDELVVSGAGDAEVRLFNLSRFSGRGL 132
++S +VS + D ++++++ SG+ L
Sbjct: 91 SDSSR--LVSASDDKTLKVWDMR--SGKCL 116
Score = 62 (26.9 bits), Expect = 5.9e-08, Sum P(3) = 5.9e-08
Identities = 51/195 (26%), Positives = 74/195 (37%)
Query: 91 GHSANVFCTKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRV 150
GHSA + KF P + E + S A DA + ++ D N LY H+ +
Sbjct: 37 GHSAAISSVKFSP--NGEWLASSAADALIIIWG-------AYDGNC--KKTLYG-HSLEI 84
Query: 151 KKLAVEVGNPHVVWSASEDGTLRQHDFRQGSSCPPA-G-SSHQECRNILLDLRCGAKRSL 208
+A + +V SAS+D TL+ D R G G S C + S
Sbjct: 85 SDVAWSSDSSRLV-SASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSF 143
Query: 209 ADPPK----------QTLSLKSCDISSTRPHL---LLVGGS-DAFARLYDRRMLPPLTSC 254
+ K +TLS S IS+ + L+V GS D R++D L +
Sbjct: 144 DESVKIWEVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTL 203
Query: 255 QKRMSPPPCVNYFCP 269
+PP F P
Sbjct: 204 ADEGNPPVSFVKFSP 218
Score = 57 (25.1 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 16/42 (38%), Positives = 21/42 (50%)
Query: 251 LTSCQKRMSPPPCVNYFCPMHLSEHGRSSLHLTHVTFSPNGE 292
L S +R P NY + L+ H S ++ V FSPNGE
Sbjct: 14 LLSAPRREEEPQKPNYALRLTLAGH---SAAISSVKFSPNGE 52
Score = 53 (23.7 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 16/62 (25%), Positives = 25/62 (40%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCV----VATSGIDNTIK 694
G YI + + D +W+ GR +K G + C+ F V + DN +
Sbjct: 220 GKYILTATLDNTLKLWDYSRGRCLKTYTGHKNEKYCLFAS-FSVTGRKWVVSGSEDNMVY 278
Query: 695 IW 696
IW
Sbjct: 279 IW 280
Score = 51 (23.0 bits), Expect = 2.6e-16, Sum P(3) = 2.6e-16
Identities = 16/53 (30%), Positives = 28/53 (52%)
Query: 268 CPMHLSEHGRSSLHLTHVTFSPNGEEVLLSYSGEHVYLMDVNHAGGRAMR-YT 319
C L++ G + + V FSPNG+ +L + + L D ++ GR ++ YT
Sbjct: 199 CLRTLADEGNPPV--SFVKFSPNGKYILTATLDNTLKLWD--YSRGRCLKTYT 247
>UNIPROTKB|H0YEI6 [details] [associations]
symbol:WDTC1 "WD and tetratricopeptide repeats protein 1"
species:9606 "Homo sapiens" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0004857 "enzyme inhibitor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006006 "glucose metabolic process" evidence=IEA] [GO:0008361
"regulation of cell size" evidence=IEA] [GO:0032869 "cellular
response to insulin stimulus" evidence=IEA] [GO:0035264
"multicellular organism growth" evidence=IEA] [GO:0042393 "histone
binding" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0045717 "negative regulation of fatty acid
biosynthetic process" evidence=IEA] [GO:0055082 "cellular chemical
homeostasis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0032869 GO:GO:0004857 GO:GO:0001701
GO:GO:0006006 GO:GO:0008361 GO:GO:0000122 GO:GO:0045717
GO:GO:0035264 EMBL:AL663123 EMBL:AL590640 HGNC:HGNC:29175
ChiTaRS:WDTC1 GO:GO:0055082 ProteinModelPortal:H0YEI6
Ensembl:ENST00000472249 Bgee:H0YEI6 Uniprot:H0YEI6
Length = 125
Score = 209 (78.6 bits), Expect = 7.0e-16, P = 7.0e-16
Identities = 41/89 (46%), Positives = 59/89 (66%)
Query: 642 IASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIWTPSAS 701
I SGSDDG +FIWEK+T L+++L GDE++VNC+Q HP C +ATSGID +++W P
Sbjct: 1 IVSGSDDGSFFIWEKETTNLVRVLQGDESIVNCLQPHPSYCFLATSGIDPVVRLWNPR-- 58
Query: 702 VPSIVSGGAAGPDTADVLEAMESNQRKLS 730
P S G D+ A ++NQR+++
Sbjct: 59 -PE--SEDLTGRVVEDMEGASQANQRRMN 84
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 149 (57.5 bits), Expect = 1.6e-15, Sum P(3) = 1.6e-15
Identities = 30/83 (36%), Positives = 52/83 (62%)
Query: 43 ERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFV 102
ER LEGH+ ++ I+W+ L+ S SDD I +W S K++ +++ GH VF F
Sbjct: 81 ERTLEGHKEGISDIAWSQDSKLICSASDDKTIKIWDVESGKMVKTLK-GHKEYVFGVSFN 139
Query: 103 PETSDELVVSGAGDAEVRLFNLS 125
P+++ L+VSG+ D VR+++++
Sbjct: 140 PQSN--LIVSGSFDENVRIWDVN 160
Score = 122 (48.0 bits), Expect = 1.6e-15, Sum P(3) = 1.6e-15
Identities = 28/80 (35%), Positives = 45/80 (56%)
Query: 619 YVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCH 678
Y GH N I ++F G +I +GS+D +I+ QT +++ L G E VV V CH
Sbjct: 254 YTGHKNEKYCIF-STFSVTCGKWIVTGSEDNLIYIYNLQTREIVQTLAGHEDVVLTVACH 312
Query: 679 PFDCVVATSGI--DNTIKIW 696
P + ++A+ + D ++KIW
Sbjct: 313 PTENIIASGALEKDRSVKIW 332
Score = 109 (43.4 bits), Expect = 4.0e-11, Sum P(2) = 4.0e-11
Identities = 42/165 (25%), Positives = 77/165 (46%)
Query: 44 RELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP 103
+ L+GH+ V +S+N + +L++SGS D ++ +W ++ + I + HS V F
Sbjct: 124 KTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWDVNTGECTKMI-SAHSDPVTGVHF-- 180
Query: 104 ETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPH-- 161
LVVSG+ D VR+++ + +G+ L N I+ T K+++ +P+
Sbjct: 181 NRDGTLVVSGSYDGTVRIWDTT--TGQLL--NTIS--------TEDGKEVSFVKFSPNGK 228
Query: 162 VVWSASEDGTLRQHDFRQGSSCPPAGSSHQE---CRNILLDLRCG 203
V + + D TLR + C + H+ C + CG
Sbjct: 229 FVLAGTLDNTLRLWSYNNNKKCLKTYTGHKNEKYCIFSTFSVTCG 273
Score = 88 (36.0 bits), Expect = 5.3e-12, Sum P(2) = 5.3e-12
Identities = 19/60 (31%), Positives = 33/60 (55%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAV-VNCVQCHPFDCVVATSGIDNTIKIWT 697
G + SGS DG IW+ TG+L+ + ++ V+ V+ P V +DNT+++W+
Sbjct: 184 GTLVVSGSYDGTVRIWDTTTGQLLNTISTEDGKEVSFVKFSPNGKFVLAGTLDNTLRLWS 243
Score = 79 (32.9 bits), Expect = 4.6e-08, Sum P(3) = 4.6e-08
Identities = 26/130 (20%), Positives = 55/130 (42%)
Query: 1 MENFPFHDGSIYDMLDTRHTDTRPDVNHSLQMHSSLVRRLSQERELEGHQGCVNAISWNS 60
ME+ P S L +P S+ + + + + L+GH ++++ ++
Sbjct: 1 MESGPASMSSSSSYLYQEQQQQQPQQTESIPQTPNYILKYT----LKGHLKSISSVKFSP 56
Query: 61 KGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPETSDELVVSGAGDAEVR 120
G L S S D I +W K ++E GH + + +L+ S + D ++
Sbjct: 57 DGKWLASASADKTIKIWGAYDGKFERTLE-GHKEGI--SDIAWSQDSKLICSASDDKTIK 113
Query: 121 LFNLSRFSGR 130
++++ SG+
Sbjct: 114 IWDVE--SGK 121
Score = 39 (18.8 bits), Expect = 1.6e-15, Sum P(3) = 1.6e-15
Identities = 8/14 (57%), Positives = 11/14 (78%)
Query: 282 LTHVTFSPNGEEVL 295
++ V FSPNG+ VL
Sbjct: 218 VSFVKFSPNGKFVL 231
Score = 38 (18.4 bits), Expect = 5.8e-08, Sum P(3) = 5.8e-08
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 285 VTFSPNGEEVLLSYSGEHVYLMDVN 309
V+F+P ++ E+V + DVN
Sbjct: 136 VSFNPQSNLIVSGSFDENVRIWDVN 160
Score = 37 (18.1 bits), Expect = 0.00067, Sum P(3) = 0.00067
Identities = 17/90 (18%), Positives = 40/90 (44%)
Query: 91 GHSANVFCTKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRV 150
GH ++ KF P+ + + S + D ++++ + G+ + + + H +
Sbjct: 44 GHLKSISSVKFSPD--GKWLASASADKTIKIWGA--YDGKF--ERTL------EGHKEGI 91
Query: 151 KKLAVEVGNPHVVWSASEDGTLRQHDFRQG 180
+A + ++ SAS+D T++ D G
Sbjct: 92 SDIAWSQDSK-LICSASDDKTIKIWDVESG 120
>ZFIN|ZDB-GENE-060929-808 [details] [associations]
symbol:dcaf5 "ddb1 and cul4 associated factor 5"
species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-060929-808 Gene3D:2.130.10.10 SUPFAM:SSF50978
CTD:8816 KO:K11800 GeneTree:ENSGT00530000062951 EMBL:CR361558
EMBL:CABZ01003772 EMBL:CABZ01003773 EMBL:FP103009 EMBL:BC124494
IPI:IPI00503404 RefSeq:NP_001071020.1 UniGene:Dr.83785
Ensembl:ENSDART00000084867 GeneID:560257 KEGG:dre:560257
HOGENOM:HOG000205845 HOVERGEN:HBG095204 InParanoid:Q08BZ1
NextBio:20883350 Uniprot:Q08BZ1
Length = 789
Score = 152 (58.6 bits), Expect = 5.3e-15, Sum P(2) = 5.3e-15
Identities = 55/185 (29%), Positives = 84/185 (45%)
Query: 10 SIYDMLDTRHTDTRPDVNHSLQMHSSLVRRLSQERELEGHQGCVNAISW-NSKGSLLISG 68
S L R D P + Q ++++ GH GCVNAI + N+ G L+SG
Sbjct: 11 SAVGFLSRRTIDGHPQLKEEFQRRRLSGCSSLYKKDMLGHFGCVNAIEFSNNGGQWLVSG 70
Query: 69 SDDTHINVWSYSSRKLLHS------IETGHSANVFCTKFVPETSDELVVSGAGDAEVRLF 122
DD + +W K +HS ++ H +N+FC F +++++ V SG D +V L
Sbjct: 71 GDDRRVLLWHME--KAIHSRAKPMKLKGEHLSNIFCLAF--DSTNKRVFSGGNDEQVILH 126
Query: 123 NLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHVVWSASEDGTLRQHDFRQGSS 182
++ R G L N H V L+V N +V S+S+DG + D R+
Sbjct: 127 DVER--GETL--NVFL-------HDDAVYGLSVSPVNDNVFASSSDDGRVLIWDTRE--- 172
Query: 183 CPPAG 187
PP G
Sbjct: 173 -PPHG 176
Score = 126 (49.4 bits), Expect = 5.3e-15, Sum P(2) = 5.3e-15
Identities = 31/89 (34%), Positives = 49/89 (55%)
Query: 621 GHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQT-------GRLIK---MLL-GDE 669
G+ N T +K F G R YI SGSDD ++W T GR++ M+L G
Sbjct: 273 GYFNSCT-MKSCCFAGDRDQYILSGSDDFNLYMWRIPTDPEAGGAGRVVNGAFMVLKGHR 331
Query: 670 AVVNCVQCHPFDCVVATSGIDNTIKIWTP 698
++VN V+ +P ++ +SG++ IK+W+P
Sbjct: 332 SIVNQVRFNPHTYMICSSGVEKVIKVWSP 360
Score = 59 (25.8 bits), Expect = 4.5e-08, Sum P(2) = 4.5e-08
Identities = 28/114 (24%), Positives = 49/114 (42%)
Query: 643 ASGSDDGRWFIWEKQT---GRLIKMLLGDEAVVNCVQCHPFDC-VVATSGIDNTIKIWTP 698
AS SDDGR IW+ + G L + + V +P + ++AT+ + +W
Sbjct: 157 ASSSDDGRVLIWDTREPPHGEPF-CLANYPSAFHSVMFNPVEPRLLATANSKEGVGLWDI 215
Query: 699 SASVPSIVS-GGAAGPDTADVLEAMESNQRKLS-RNREHSLSYELLERFHMHEF 750
S++ GG+ +A + + + L+ R R + YEL R +F
Sbjct: 216 RKPRSSLLRYGGSLSLQSAMSVRFNSTGTQLLALRRRLPPVLYELHSRLPSFQF 269
Score = 42 (19.8 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 8/30 (26%), Positives = 15/30 (50%)
Query: 188 SSHQECRNILLDLRCGAKRSLADPPKQTLS 217
S H EC + L G R+ +P ++ ++
Sbjct: 734 SIHPECSGVELGKSAGDSRTQGEPSEREIT 763
Score = 40 (19.1 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 217 SLKSCDISSTRPHLLLVGGSDAFARLY 243
++KSC + R +L GSD F LY
Sbjct: 279 TMKSCCFAGDRDQYIL-SGSDDF-NLY 303
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 137 (53.3 bits), Expect = 6.7e-15, Sum P(3) = 6.7e-15
Identities = 31/80 (38%), Positives = 45/80 (56%)
Query: 619 YVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGD-EAVVNCVQC 677
Y GH N I A F G I SGS+D +WE + +L++ L G E V+N V C
Sbjct: 236 YTGHVNAQYCISSA-FSVTNGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMN-VAC 293
Query: 678 HPFDCVVATSGIDNTIKIWT 697
HP + ++A+ +D T++IWT
Sbjct: 294 HPTENLIASGSLDKTVRIWT 313
Score = 125 (49.1 bits), Expect = 6.7e-15, Sum P(3) = 6.7e-15
Identities = 22/82 (26%), Positives = 50/82 (60%)
Query: 44 RELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP 103
+E GH+ ++ ++++S ++S SDD + +W + L+ ++ GH+ FC F P
Sbjct: 65 QEFTGHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTL-IGHTNYAFCVNFNP 123
Query: 104 ETSDELVVSGAGDAEVRLFNLS 125
+++ ++VSG+ D VR+++++
Sbjct: 124 QSN--MIVSGSFDETVRIWDVT 143
Score = 119 (46.9 bits), Expect = 0.00047, P = 0.00047
Identities = 26/87 (29%), Positives = 44/87 (50%)
Query: 610 ETVIDMKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDE 669
+ + + Q + GH N +D+ +S +I S SDD +W+ +TG LIK L+G
Sbjct: 58 DPIAEPVQEFTGHENGISDVAFSS----DARFIVSASDDKTLKLWDVETGSLIKTLIGHT 113
Query: 670 AVVNCVQCHPFDCVVATSGIDNTIKIW 696
CV +P ++ + D T++IW
Sbjct: 114 NYAFCVNFNPQSNMIVSGSFDETVRIW 140
Score = 98 (39.6 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 22/64 (34%), Positives = 34/64 (53%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDE-AVVNCVQCHPFDCVVATSGIDNTIKIWT 697
G I S S DG IW+ TG +K L+ DE V+ V+ P + +DNT+++W
Sbjct: 167 GSLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWN 226
Query: 698 PSAS 701
S++
Sbjct: 227 ISSA 230
Score = 89 (36.4 bits), Expect = 3.0e-11, Sum P(3) = 3.0e-11
Identities = 31/126 (24%), Positives = 60/126 (47%)
Query: 1 MENFPFHDGSIYDML---DTRHTDTRPDVNHSLQMHSSLVRRLSQERELEGHQGCVNAIS 57
++ F H+ I D+ D R + D + +L++ V S + L GH ++
Sbjct: 64 VQEFTGHENGISDVAFSSDARFIVSASD-DKTLKLWD--VETGSLIKTLIGHTNYAFCVN 120
Query: 58 WNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPETSDELVVSGAGDA 117
+N + ++++SGS D + +W ++ K L + HS V F + S L+VS + D
Sbjct: 121 FNPQSNMIVSGSFDETVRIWDVTTGKCL-KVLPAHSDPVTAVDFNRDGS--LIVSSSYDG 177
Query: 118 EVRLFN 123
R+++
Sbjct: 178 LCRIWD 183
Score = 85 (35.0 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 21/80 (26%), Positives = 39/80 (48%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L H V A+ +N GSL++S S D +W + + ++ + V +F P
Sbjct: 151 LPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVRFSP-- 208
Query: 106 SDELVVSGAGDAEVRLFNLS 125
+ + ++ G D +RL+N+S
Sbjct: 209 NGKFILVGTLDNTLRLWNIS 228
Score = 65 (27.9 bits), Expect = 8.0e-09, Sum P(3) = 8.0e-09
Identities = 25/93 (26%), Positives = 41/93 (44%)
Query: 90 TGHSANVFCTKFVPETSD-ELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTR 148
T H+ V KF +SD L+ S + D +R + ++ ++D P + H
Sbjct: 21 TSHNRAVSSVKF---SSDGRLLASASADKTIRTYTINT-----INDPIAEPVQEFTGHEN 72
Query: 149 RVKKLAVEVGNPHVVWSASEDGTLRQHDFRQGS 181
+ +A +V SAS+D TL+ D GS
Sbjct: 73 GISDVAFSSDARFIV-SASDDKTLKLWDVETGS 104
Score = 47 (21.6 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 17/85 (20%), Positives = 31/85 (36%)
Query: 621 GHCN---VGTDIKQASFL--GQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCV 675
GHC + + SF+ G +I G+ D +W + + +K G C+
Sbjct: 187 GHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCI 246
Query: 676 QCHPFDCV----VATSGIDNTIKIW 696
F + + DN + +W
Sbjct: 247 SS-AFSVTNGKRIVSGSEDNCVHMW 270
Score = 42 (19.8 bits), Expect = 6.7e-15, Sum P(3) = 6.7e-15
Identities = 9/30 (30%), Positives = 18/30 (60%)
Query: 282 LTHVTFSPNGEEVLLSYSGEHVYLMDVNHA 311
++ V FSPNG+ +L+ + L +++ A
Sbjct: 201 VSFVRFSPNGKFILVGTLDNTLRLWNISSA 230
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 140 (54.3 bits), Expect = 7.8e-15, Sum P(3) = 7.8e-15
Identities = 30/85 (35%), Positives = 53/85 (62%)
Query: 40 LSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCT 99
LS ER L GH+ VN +W++ +++ SDD + ++ + K+ +++ GH+ VFC
Sbjct: 111 LSCERTLTGHKLGVNDFAWSADSKSIVTASDDKTLKIYEVPTVKMAKTLK-GHTNYVFCC 169
Query: 100 KFVPETSDELVVSGAGDAEVRLFNL 124
F P++S LVVSG+ D VR++++
Sbjct: 170 NFNPQSS--LVVSGSFDESVRIWDV 192
Score = 126 (49.4 bits), Expect = 7.8e-15, Sum P(3) = 7.8e-15
Identities = 31/84 (36%), Positives = 46/84 (54%)
Query: 615 MKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNC 674
+KQ Y GH N I A+F G +I SGS+D + ++W QT +++ L G V
Sbjct: 283 LKQ-YQGHENNKYCIF-ANFSVTGGKWIISGSEDCKIYVWNLQTKEVVQSLEGHTQAVIA 340
Query: 675 VQCHPFDCVVATSGI--DNTIKIW 696
CHP ++A+ + DNTI+IW
Sbjct: 341 SDCHPMQNMIASGALEPDNTIRIW 364
Score = 108 (43.1 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 38/161 (23%), Positives = 75/161 (46%)
Query: 16 DTRHTDTRPDVNHSLQMHSSLVRRLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHIN 75
D++ T D + +L+++ V + + L+GH V ++N + SL++SGS D +
Sbjct: 132 DSKSIVTASD-DKTLKIYE--VPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVR 188
Query: 76 VWSYSSRKLLHSIETGHSANVFCTKFVPETSDELVVSGAGDAEVRLFNLSRFSG-RGLDD 134
+W + + ++ HS V F + S L+ SG+ D VR+++ + + L D
Sbjct: 189 IWDVRTGMCVKTLPA-HSDPVSAVSFNRDGS--LITSGSYDGLVRIWDTANGQCVKTLVD 245
Query: 135 NAITPSALYQCHTRRVKKLAVEVGNPHVVWSASEDGTLRQH 175
+ P A + L+ + N +W + TL+Q+
Sbjct: 246 DENPPVAFVKFSPNGKYILSSNLDNTLKLWDFGKGKTLKQY 286
Score = 79 (32.9 bits), Expect = 1.7e-08, Sum P(3) = 1.7e-08
Identities = 17/79 (21%), Positives = 38/79 (48%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
+EGH ++A+ ++ G L + S D + +W+ S ++ TGH V F
Sbjct: 75 IEGHTKSISAVKFSPCGKFLGTSSADKTVKIWNMSDLSCERTL-TGHKLGV--NDFAWSA 131
Query: 106 SDELVVSGAGDAEVRLFNL 124
+ +V+ + D ++++ +
Sbjct: 132 DSKSIVTASDDKTLKIYEV 150
Score = 49 (22.3 bits), Expect = 8.7e-07, Sum P(2) = 8.7e-07
Identities = 11/37 (29%), Positives = 17/37 (45%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCV 675
G YI S + D +W+ G+ +K G E C+
Sbjct: 260 GKYILSSNLDNTLKLWDFGKGKTLKQYQGHENNKYCI 296
Score = 41 (19.5 bits), Expect = 7.8e-15, Sum P(3) = 7.8e-15
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 285 VTFSPNGEEVLLSYSGEHVYLMD 307
V FSPNG+ +L S + L D
Sbjct: 254 VKFSPNGKYILSSNLDNTLKLWD 276
>WB|WBGene00006474 [details] [associations]
symbol:wdr-5.1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0006915
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 141 (54.7 bits), Expect = 2.7e-14, Sum P(2) = 2.7e-14
Identities = 30/82 (36%), Positives = 52/82 (63%)
Query: 43 ERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFV 102
ER L GH+ VN I+W+S ++S SDD + ++ + ++ +++ GH+ VFC F
Sbjct: 122 ERTLTGHKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLK-GHNNYVFCCNFN 180
Query: 103 PETSDELVVSGAGDAEVRLFNL 124
P++S LVVSG+ D VR++++
Sbjct: 181 PQSS--LVVSGSFDESVRIWDV 200
Score = 121 (47.7 bits), Expect = 2.7e-14, Sum P(2) = 2.7e-14
Identities = 31/84 (36%), Positives = 44/84 (52%)
Query: 615 MKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNC 674
+KQ Y GH N I A+F G +I SGS+D + +IW QT +++ L G V
Sbjct: 291 LKQ-YTGHENSKYCIF-ANFSVTGGKWIISGSEDCKIYIWNLQTREIVQCLEGHTQPVLA 348
Query: 675 VQCHPFDCVVATSGI--DNTIKIW 696
CHP ++A+ + DN I IW
Sbjct: 349 SDCHPVQNIIASGALEPDNKIHIW 372
Score = 103 (41.3 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 26/69 (37%), Positives = 37/69 (53%)
Query: 629 IKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDE-AVVNCVQCHPFDCVVATS 687
+ SF + G IASGS DG IW+ G+ IK L+ DE V V+ P + S
Sbjct: 216 VSAVSF-NRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPNGKYILAS 274
Query: 688 GIDNTIKIW 696
+D+T+K+W
Sbjct: 275 NLDSTLKLW 283
Score = 97 (39.2 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 39/168 (23%), Positives = 78/168 (46%)
Query: 16 DTRHTDTRPDVNHSLQMHSSLVRRLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHIN 75
D+R + D + +L++ + R++ + L+GH V ++N + SL++SGS D +
Sbjct: 140 DSRCVVSASD-DKTLKIFEIVTSRMT--KTLKGHNNYVFCCNFNPQSSLVVSGSFDESVR 196
Query: 76 VWSYSSRKLLHSIETGHSANVFCTKFVPETSDELVVSGAGDAEVRLFNLSRFSG-RGLDD 134
+W + + ++ HS V F + S L+ SG+ D VR+++ + + L D
Sbjct: 197 IWDVKTGMCIKTLPA-HSDPVSAVSFNRDGS--LIASGSYDGLVRIWDTANGQCIKTLVD 253
Query: 135 NAITPSALYQCHTRRVKKLAVEVGNPHVVWSASEDGTLRQHDFRQGSS 182
+ P A + N + +++ D TL+ DF +G +
Sbjct: 254 DENPPVAFVKFSP-----------NGKYILASNLDSTLKLWDFSKGKT 290
Score = 75 (31.5 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 30/114 (26%), Positives = 50/114 (43%)
Query: 642 IASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW-TPSA 700
+ SGS D IW+ +TG IK L V+ V + ++A+ D ++IW T +
Sbjct: 186 VVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANG 245
Query: 701 S-VPSIVSGGAAGPDTADVLEAMESNQRKLSRNREHSLSYELLERFHMHEFSEG 753
+ ++V P A V K S N ++ L+ L + +FS+G
Sbjct: 246 QCIKTLVDD--ENPPVAFV---------KFSPNGKYILASNLDSTLKLWDFSKG 288
Score = 70 (29.7 bits), Expect = 8.3e-07, Sum P(2) = 8.3e-07
Identities = 20/80 (25%), Positives = 37/80 (46%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
LEGH +++ ++ G L + S D + +W+ + TGH V + +
Sbjct: 83 LEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMD-HMICERTLTGHKLGV---NDIAWS 138
Query: 106 SDE-LVVSGAGDAEVRLFNL 124
SD VVS + D +++F +
Sbjct: 139 SDSRCVVSASDDKTLKIFEI 158
Score = 52 (23.4 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 16/45 (35%), Positives = 22/45 (48%)
Query: 285 VTFSPNGEEVLLSYSGEHVYLMDVNHAGGRAMRYTVGDASKIMSF 329
V FSPNG+ +L S + L D + G +YT + SK F
Sbjct: 262 VKFSPNGKYILASNLDSTLKLWDFSK-GKTLKQYTGHENSKYCIF 305
Score = 50 (22.7 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 10/37 (27%), Positives = 17/37 (45%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCV 675
G YI + + D +W+ G+ +K G E C+
Sbjct: 268 GKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCI 304
>UNIPROTKB|Q17963 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 141 (54.7 bits), Expect = 2.7e-14, Sum P(2) = 2.7e-14
Identities = 30/82 (36%), Positives = 52/82 (63%)
Query: 43 ERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFV 102
ER L GH+ VN I+W+S ++S SDD + ++ + ++ +++ GH+ VFC F
Sbjct: 122 ERTLTGHKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLK-GHNNYVFCCNFN 180
Query: 103 PETSDELVVSGAGDAEVRLFNL 124
P++S LVVSG+ D VR++++
Sbjct: 181 PQSS--LVVSGSFDESVRIWDV 200
Score = 121 (47.7 bits), Expect = 2.7e-14, Sum P(2) = 2.7e-14
Identities = 31/84 (36%), Positives = 44/84 (52%)
Query: 615 MKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNC 674
+KQ Y GH N I A+F G +I SGS+D + +IW QT +++ L G V
Sbjct: 291 LKQ-YTGHENSKYCIF-ANFSVTGGKWIISGSEDCKIYIWNLQTREIVQCLEGHTQPVLA 348
Query: 675 VQCHPFDCVVATSGI--DNTIKIW 696
CHP ++A+ + DN I IW
Sbjct: 349 SDCHPVQNIIASGALEPDNKIHIW 372
Score = 103 (41.3 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 26/69 (37%), Positives = 37/69 (53%)
Query: 629 IKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDE-AVVNCVQCHPFDCVVATS 687
+ SF + G IASGS DG IW+ G+ IK L+ DE V V+ P + S
Sbjct: 216 VSAVSF-NRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPNGKYILAS 274
Query: 688 GIDNTIKIW 696
+D+T+K+W
Sbjct: 275 NLDSTLKLW 283
Score = 97 (39.2 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 39/168 (23%), Positives = 78/168 (46%)
Query: 16 DTRHTDTRPDVNHSLQMHSSLVRRLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHIN 75
D+R + D + +L++ + R++ + L+GH V ++N + SL++SGS D +
Sbjct: 140 DSRCVVSASD-DKTLKIFEIVTSRMT--KTLKGHNNYVFCCNFNPQSSLVVSGSFDESVR 196
Query: 76 VWSYSSRKLLHSIETGHSANVFCTKFVPETSDELVVSGAGDAEVRLFNLSRFSG-RGLDD 134
+W + + ++ HS V F + S L+ SG+ D VR+++ + + L D
Sbjct: 197 IWDVKTGMCIKTLPA-HSDPVSAVSFNRDGS--LIASGSYDGLVRIWDTANGQCIKTLVD 253
Query: 135 NAITPSALYQCHTRRVKKLAVEVGNPHVVWSASEDGTLRQHDFRQGSS 182
+ P A + N + +++ D TL+ DF +G +
Sbjct: 254 DENPPVAFVKFSP-----------NGKYILASNLDSTLKLWDFSKGKT 290
Score = 75 (31.5 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 30/114 (26%), Positives = 50/114 (43%)
Query: 642 IASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW-TPSA 700
+ SGS D IW+ +TG IK L V+ V + ++A+ D ++IW T +
Sbjct: 186 VVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANG 245
Query: 701 S-VPSIVSGGAAGPDTADVLEAMESNQRKLSRNREHSLSYELLERFHMHEFSEG 753
+ ++V P A V K S N ++ L+ L + +FS+G
Sbjct: 246 QCIKTLVDD--ENPPVAFV---------KFSPNGKYILASNLDSTLKLWDFSKG 288
Score = 70 (29.7 bits), Expect = 8.3e-07, Sum P(2) = 8.3e-07
Identities = 20/80 (25%), Positives = 37/80 (46%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
LEGH +++ ++ G L + S D + +W+ + TGH V + +
Sbjct: 83 LEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMD-HMICERTLTGHKLGV---NDIAWS 138
Query: 106 SDE-LVVSGAGDAEVRLFNL 124
SD VVS + D +++F +
Sbjct: 139 SDSRCVVSASDDKTLKIFEI 158
Score = 52 (23.4 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 16/45 (35%), Positives = 22/45 (48%)
Query: 285 VTFSPNGEEVLLSYSGEHVYLMDVNHAGGRAMRYTVGDASKIMSF 329
V FSPNG+ +L S + L D + G +YT + SK F
Sbjct: 262 VKFSPNGKYILASNLDSTLKLWDFSK-GKTLKQYTGHENSKYCIF 305
Score = 50 (22.7 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 10/37 (27%), Positives = 17/37 (45%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCV 675
G YI + + D +W+ G+ +K G E C+
Sbjct: 268 GKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCI 304
>TAIR|locus:2140215 [details] [associations]
symbol:WDR5b "AT4G02730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL161495 HSSP:P16649 GO:GO:0080008 EMBL:AC004044 KO:K14963
HOGENOM:HOG000091642 ProtClustDB:CLSN2684254 EMBL:AF439825
EMBL:AY088121 EMBL:AY125558 IPI:IPI00523608 PIR:G85034
RefSeq:NP_192182.1 UniGene:At.26627 ProteinModelPortal:Q9SY00
SMR:Q9SY00 EnsemblPlants:AT4G02730.1 GeneID:828189
KEGG:ath:AT4G02730 TAIR:At4g02730 InParanoid:Q9SY00 OMA:ETIRIWE
PhylomeDB:Q9SY00 ArrayExpress:Q9SY00 Genevestigator:Q9SY00
Uniprot:Q9SY00
Length = 333
Score = 134 (52.2 bits), Expect = 3.9e-14, Sum P(2) = 3.9e-14
Identities = 31/84 (36%), Positives = 43/84 (51%)
Query: 619 YVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCH 678
Y GH N I A F G YI SGS+D ++W+ Q +++ L G V V CH
Sbjct: 251 YTGHTNKVFCITSA-FSVTNGKYIVSGSEDNCVYLWDLQARNILQRLEGHTDAVISVSCH 309
Query: 679 PFDCVVATSG--IDNTIKIWTPSA 700
P +++SG +D TI+IW A
Sbjct: 310 PVQNEISSSGNHLDKTIRIWKQDA 333
Score = 125 (49.1 bits), Expect = 3.9e-14, Sum P(2) = 3.9e-14
Identities = 34/135 (25%), Positives = 65/135 (48%)
Query: 47 EGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPETS 106
EGH ++ ++W+S S SDD + +W S + GH+ VFC F P ++
Sbjct: 82 EGHSSGISDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSN 141
Query: 107 DELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHVVWSA 166
L+VSG+ D +R++ + +G+ + + + H+ + + +V SA
Sbjct: 142 --LIVSGSFDETIRIWEVK--TGKCV--------RMIKAHSMPISSVHFNRDGSLIV-SA 188
Query: 167 SEDGTLRQHDFRQGS 181
S DG+ + D ++G+
Sbjct: 189 SHDGSCKIWDAKEGT 203
Score = 99 (39.9 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 21/80 (26%), Positives = 43/80 (53%)
Query: 44 RELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP 103
+ LEGH ++ + +++ G+LL S S D + +WS ++ L+H E GHS+ + +
Sbjct: 37 KTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYE-GHSSGI--SDLAW 93
Query: 104 ETSDELVVSGAGDAEVRLFN 123
+ S + D +R+++
Sbjct: 94 SSDSHYTCSASDDCTLRIWD 113
Score = 92 (37.4 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 22/78 (28%), Positives = 40/78 (51%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L GH V +++N +L++SGS D I +W + K + I+ HS + F +
Sbjct: 124 LRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKA-HSMPISSVHFNRDG 182
Query: 106 SDELVVSGAGDAEVRLFN 123
S L+VS + D ++++
Sbjct: 183 S--LIVSASHDGSCKIWD 198
Score = 83 (34.3 bits), Expect = 8.6e-10, Sum P(2) = 8.6e-10
Identities = 34/117 (29%), Positives = 53/117 (45%)
Query: 67 SGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPETSDELVVSGAGDAEVRLFNLSR 126
+G+ T NV Y + L ++E GH+A + C KF L+ S + D + L++ +
Sbjct: 18 TGNAGTSGNVPIYKPYRHLKTLE-GHTAAISCVKF--SNDGNLLASASVDKTMILWSATN 74
Query: 127 FSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHVVWSASEDGTLRQHDFRQGSSC 183
+S L Y+ H+ + LA + H SAS+D TLR D R C
Sbjct: 75 YS---LIHR-------YEGHSSGISDLAWS-SDSHYTCSASDDCTLRIWDARSPYEC 120
Score = 77 (32.2 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 16/55 (29%), Positives = 29/55 (52%)
Query: 642 IASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW 696
I SGS D IWE +TG+ ++M+ ++ V + ++ ++ D + KIW
Sbjct: 143 IVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIW 197
Score = 76 (31.8 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 17/58 (29%), Positives = 31/58 (53%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEA-VVNCVQCHPFDCVVATSGIDNTIKI 695
G I S S DG IW+ + G +K L+ D++ V+ + P + + +D+T+K+
Sbjct: 182 GSLIVSASHDGSCKIWDAKEGTCLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLKL 239
Score = 55 (24.4 bits), Expect = 6.6e-06, Sum P(2) = 6.6e-06
Identities = 13/44 (29%), Positives = 24/44 (54%)
Query: 287 FSPNGEEVLLSYSGEHVYLMDVNHAGGRAMRYTVGDASKIMSFT 330
FSPNG+ +L++ + L N+A G+ ++ G +K+ T
Sbjct: 221 FSPNGKFILVATLDSTLKLS--NYATGKFLKVYTGHTNKVFCIT 262
Score = 38 (18.4 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 13/62 (20%), Positives = 24/62 (38%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCV----VATSGIDNTIK 694
G +I + D + TG+ +K+ G V C+ F + + DN +
Sbjct: 225 GKFILVATLDSTLKLSNYATGKFLKVYTGHTNKVFCITS-AFSVTNGKYIVSGSEDNCVY 283
Query: 695 IW 696
+W
Sbjct: 284 LW 285
>UNIPROTKB|G3V6K4 [details] [associations]
symbol:Dcaf5 "Protein Dcaf5" species:10116 "Rattus
norvegicus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0080008
"Cul4-RING ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1306535 Gene3D:2.130.10.10 SUPFAM:SSF50978 EMBL:CH473947
CTD:8816 KO:K11800 OMA:YIGEDNY GeneTree:ENSGT00530000062951
RefSeq:NP_001094188.1 UniGene:Rn.47944 ProteinModelPortal:G3V6K4
Ensembl:ENSRNOT00000006005 GeneID:314273 KEGG:rno:314273
NextBio:667391 Uniprot:G3V6K4
Length = 946
Score = 141 (54.7 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 52/181 (28%), Positives = 79/181 (43%)
Query: 10 SIYDMLDTRHTDTRPDVNHSLQMHSSLVRRLSQERELEGHQGCVNAISW-NSKGSLLISG 68
S+ L R P + Q R +++L GH GCVNAI + N+ G L+SG
Sbjct: 13 SVVGFLSQRGLHGDPLLTQDFQRRRLRGCRNLYKKDLLGHFGCVNAIEFSNNGGQWLVSG 72
Query: 69 SDDTHINVW----SYSSRKLLHSIETGHSANVFCTKFVPETSDELVVSGAGDAEVRLFNL 124
DD + +W + SR ++ H +N+FC F + + V SG D +V L ++
Sbjct: 73 GDDRRVLLWHMEQAIHSRVKPIQLKGEHHSNIFCLAF--NSGNTKVFSGGNDEQVILHDV 130
Query: 125 SRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHVVWSASEDGTLRQHDFRQGSSCP 184
S LD A H V L+V N ++ S+S+DG + D R+
Sbjct: 131 E--SSETLDVFA---------HEDAVYGLSVSPVNDNIFASSSDDGRVLIWDIRESPHGE 179
Query: 185 P 185
P
Sbjct: 180 P 180
Score = 123 (48.4 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 31/89 (34%), Positives = 49/89 (55%)
Query: 621 GHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQT-------GRLIK---MLL-GDE 669
G+ N T +K F G R YI SGSDD ++W+ GR++ M+L G
Sbjct: 275 GYFNSCT-MKSCCFAGDRDQYILSGSDDFNLYMWKVPADPEAGGLGRVVNGAFMVLKGHR 333
Query: 670 AVVNCVQCHPFDCVVATSGIDNTIKIWTP 698
++VN V+ +P ++ +SG++ IKIW+P
Sbjct: 334 SIVNQVRFNPHTYMICSSGVEKIIKIWSP 362
Score = 56 (24.8 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 25/113 (22%), Positives = 51/113 (45%)
Query: 643 ASGSDDGRWFIWE-KQTGRLIKMLLGD-EAVVNCVQCHPFDC-VVATSGIDNTIKIWTPS 699
AS SDDGR IW+ +++ L + + + V +P + ++AT+ + +W
Sbjct: 159 ASSSDDGRVLIWDIRESPHGEPFCLANYPSAFHSVMFNPVEPRLLATANSKEGVGLWDIR 218
Query: 700 ASVPSIVS-GGAAGPDTADVLEAMESNQRKLS-RNREHSLSYELLERFHMHEF 750
S++ GG +A + + + L+ R R + Y++ R + +F
Sbjct: 219 KPQSSLLRYGGNLSLQSAMSVRFNSNGTQLLALRRRLPPVLYDIHSRLPVFQF 271
Score = 40 (19.1 bits), Expect = 9.2e-05, Sum P(2) = 9.2e-05
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 217 SLKSCDISSTRPHLLLVGGSDAFARLY 243
++KSC + R +L GSD F LY
Sbjct: 281 TMKSCCFAGDRDQYIL-SGSDDF-NLY 305
>MGI|MGI:2444785 [details] [associations]
symbol:Dcaf5 "DDB1 and CUL4 associated factor 5"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 MGI:MGI:2444785 GO:GO:0005739
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319
GO:GO:0016567 GO:GO:0080008 CTD:8816 HOGENOM:HOG000060080
HOVERGEN:HBG057544 KO:K11800 OMA:YIGEDNY OrthoDB:EOG44MXRG
EMBL:AK122561 EMBL:BC030857 EMBL:BC042567 EMBL:BC046813
EMBL:AK034653 EMBL:AK077889 IPI:IPI00340504 RefSeq:NP_796241.3
UniGene:Mm.220310 UniGene:Mm.447547 ProteinModelPortal:Q80T85
SMR:Q80T85 STRING:Q80T85 PhosphoSite:Q80T85 PaxDb:Q80T85
PRIDE:Q80T85 Ensembl:ENSMUST00000054145 GeneID:320808
KEGG:mmu:320808 GeneTree:ENSGT00530000062951 InParanoid:Q80T85
NextBio:397479 Bgee:Q80T85 CleanEx:MM_WDR22 Genevestigator:Q80T85
GermOnline:ENSMUSG00000049106 Uniprot:Q80T85
Length = 946
Score = 141 (54.7 bits), Expect = 3.3e-13, Sum P(2) = 3.3e-13
Identities = 52/181 (28%), Positives = 79/181 (43%)
Query: 10 SIYDMLDTRHTDTRPDVNHSLQMHSSLVRRLSQERELEGHQGCVNAISW-NSKGSLLISG 68
S+ L R P + Q R +++L GH GCVNAI + N+ G L+SG
Sbjct: 13 SVVGFLSQRGLHGDPLLTQDFQRRRLRGCRNLYKKDLLGHFGCVNAIEFSNNGGQWLVSG 72
Query: 69 SDDTHINVW----SYSSRKLLHSIETGHSANVFCTKFVPETSDELVVSGAGDAEVRLFNL 124
DD + +W + SR ++ H +N+FC F + + V SG D +V L ++
Sbjct: 73 GDDRRVLLWHMEQAIHSRVKPIQLKGEHHSNIFCLAF--NSGNTKVFSGGNDEQVILHDV 130
Query: 125 SRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHVVWSASEDGTLRQHDFRQGSSCP 184
S LD A H V L+V N ++ S+S+DG + D R+
Sbjct: 131 E--SSETLDVFA---------HEDAVYGLSVSPVNDNIFASSSDDGRVLIWDIRESPHGE 179
Query: 185 P 185
P
Sbjct: 180 P 180
Score = 122 (48.0 bits), Expect = 3.3e-13, Sum P(2) = 3.3e-13
Identities = 31/89 (34%), Positives = 49/89 (55%)
Query: 621 GHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQT-------GRLIK---MLL-GDE 669
G+ N T +K F G R YI SGSDD ++W+ GR++ M+L G
Sbjct: 275 GYFNSCT-MKSCCFAGDRDQYILSGSDDFNLYMWKIPADPEAGGIGRVVNGAFMVLKGHR 333
Query: 670 AVVNCVQCHPFDCVVATSGIDNTIKIWTP 698
++VN V+ +P ++ +SG++ IKIW+P
Sbjct: 334 SIVNQVRFNPHTYMICSSGVEKIIKIWSP 362
Score = 56 (24.8 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 25/113 (22%), Positives = 51/113 (45%)
Query: 643 ASGSDDGRWFIWE-KQTGRLIKMLLGD-EAVVNCVQCHPFDC-VVATSGIDNTIKIWTPS 699
AS SDDGR IW+ +++ L + + + V +P + ++AT+ + +W
Sbjct: 159 ASSSDDGRVLIWDIRESPHGEPFCLANYPSAFHSVMFNPVEPRLLATANSKEGVGLWDIR 218
Query: 700 ASVPSIVS-GGAAGPDTADVLEAMESNQRKLS-RNREHSLSYELLERFHMHEF 750
S++ GG +A + + + L+ R R + Y++ R + +F
Sbjct: 219 KPQSSLLRYGGNLSLQSAMSVRFNSNGTQLLALRRRLPPVLYDIHSRLPVFQF 271
Score = 40 (19.1 bits), Expect = 0.00026, Sum P(3) = 0.00026
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 217 SLKSCDISSTRPHLLLVGGSDAFARLY 243
++KSC + R +L GSD F LY
Sbjct: 281 TMKSCCFAGDRDQYIL-SGSDDF-NLY 305
Score = 39 (18.8 bits), Expect = 0.00026, Sum P(3) = 0.00026
Identities = 16/60 (26%), Positives = 21/60 (35%)
Query: 472 PSNSVMAEKVENIKKHIXXXXXXXXXXXXDGGARSEPRTGRVLSLSDIIYRSEANSDASQ 531
PS+S +E E + + AR E TG S + Y E N D Q
Sbjct: 562 PSSSTSSEDEEELNQRRATTRQRNAMRRRQKTARDERPTGPAKSTNT--YIGEDNYDYPQ 619
>UNIPROTKB|Q96JK2 [details] [associations]
symbol:DCAF5 "DDB1- and CUL4-associated factor 5"
species:9606 "Homo sapiens" [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA;IC]
[GO:0080008 "Cul4-RING ubiquitin ligase complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
UniPathway:UPA00143 GO:GO:0005739 EMBL:CH471061 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 GO:GO:0016567
GO:GO:0080008 EMBL:AB058727 EMBL:AL831932 EMBL:AL831823
EMBL:BC136632 EMBL:AF044774 IPI:IPI00382979 IPI:IPI00783277
RefSeq:NP_003852.1 UniGene:Hs.509780 PDB:3I89 PDBsum:3I89
ProteinModelPortal:Q96JK2 SMR:Q96JK2 DIP:DIP-48763N IntAct:Q96JK2
STRING:Q96JK2 PhosphoSite:Q96JK2 DMDM:47606200 PaxDb:Q96JK2
PRIDE:Q96JK2 Ensembl:ENST00000341516 Ensembl:ENST00000554215
Ensembl:ENST00000556847 GeneID:8816 KEGG:hsa:8816 UCSC:uc001xkp.3
CTD:8816 GeneCards:GC14M069517 HGNC:HGNC:20224 MIM:603812
neXtProt:NX_Q96JK2 PharmGKB:PA165478844 HOGENOM:HOG000060080
HOVERGEN:HBG057544 InParanoid:Q96JK2 KO:K11800 OMA:YIGEDNY
OrthoDB:EOG44MXRG ChiTaRS:DCAF5 EvolutionaryTrace:Q96JK2
GenomeRNAi:8816 NextBio:33070 ArrayExpress:Q96JK2 Bgee:Q96JK2
CleanEx:HS_WDR22 Genevestigator:Q96JK2 GermOnline:ENSG00000139990
Uniprot:Q96JK2
Length = 942
Score = 141 (54.7 bits), Expect = 4.2e-13, Sum P(2) = 4.2e-13
Identities = 52/181 (28%), Positives = 79/181 (43%)
Query: 10 SIYDMLDTRHTDTRPDVNHSLQMHSSLVRRLSQERELEGHQGCVNAISW-NSKGSLLISG 68
S+ L R P + Q R +++L GH GCVNAI + N+ G L+SG
Sbjct: 13 SVVGFLSQRGLHGDPLLTQDFQRRRLRGCRNLYKKDLLGHFGCVNAIEFSNNGGQWLVSG 72
Query: 69 SDDTHINVW----SYSSRKLLHSIETGHSANVFCTKFVPETSDELVVSGAGDAEVRLFNL 124
DD + +W + SR ++ H +N+FC F + + V SG D +V L ++
Sbjct: 73 GDDRRVLLWHMEQAIHSRVKPIQLKGEHHSNIFCLAF--NSGNTKVFSGGNDEQVILHDV 130
Query: 125 SRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHVVWSASEDGTLRQHDFRQGSSCP 184
S LD A H V L+V N ++ S+S+DG + D R+
Sbjct: 131 E--SSETLDVFA---------HEDAVYGLSVSPVNDNIFASSSDDGRVLIWDIRESPHGE 179
Query: 185 P 185
P
Sbjct: 180 P 180
Score = 121 (47.7 bits), Expect = 4.2e-13, Sum P(2) = 4.2e-13
Identities = 31/89 (34%), Positives = 48/89 (53%)
Query: 621 GHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQT-------GRLIK---MLL-GDE 669
G+ N T +K F G R YI SGSDD ++W GR++ M+L G
Sbjct: 275 GYFNSCT-MKSCCFAGDRDQYILSGSDDFNLYMWRIPADPEAGGIGRVVNGAFMVLKGHR 333
Query: 670 AVVNCVQCHPFDCVVATSGIDNTIKIWTP 698
++VN V+ +P ++ +SG++ IKIW+P
Sbjct: 334 SIVNQVRFNPHTYMICSSGVEKIIKIWSP 362
Score = 56 (24.8 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 25/113 (22%), Positives = 51/113 (45%)
Query: 643 ASGSDDGRWFIWE-KQTGRLIKMLLGD-EAVVNCVQCHPFDC-VVATSGIDNTIKIWTPS 699
AS SDDGR IW+ +++ L + + + V +P + ++AT+ + +W
Sbjct: 159 ASSSDDGRVLIWDIRESPHGEPFCLANYPSAFHSVMFNPVEPRLLATANSKEGVGLWDIR 218
Query: 700 ASVPSIVS-GGAAGPDTADVLEAMESNQRKLS-RNREHSLSYELLERFHMHEF 750
S++ GG +A + + + L+ R R + Y++ R + +F
Sbjct: 219 KPQSSLLRYGGNLSLQSAMSVRFNSNGTQLLALRRRLPPVLYDIHSRLPVFQF 271
Score = 40 (19.1 bits), Expect = 9.1e-05, Sum P(2) = 9.1e-05
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 217 SLKSCDISSTRPHLLLVGGSDAFARLY 243
++KSC + R +L GSD F LY
Sbjct: 281 TMKSCCFAGDRDQYIL-SGSDDF-NLY 305
>UNIPROTKB|E2QXZ3 [details] [associations]
symbol:DCAF5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005739 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0080008
CTD:8816 KO:K11800 OMA:YIGEDNY GeneTree:ENSGT00530000062951
EMBL:AAEX03005804 EMBL:AAEX03005805 EMBL:AAEX03005806
RefSeq:XP_547871.3 Ensembl:ENSCAFT00000026219 GeneID:490749
KEGG:cfa:490749 Uniprot:E2QXZ3
Length = 947
Score = 141 (54.7 bits), Expect = 4.2e-13, Sum P(2) = 4.2e-13
Identities = 52/181 (28%), Positives = 79/181 (43%)
Query: 10 SIYDMLDTRHTDTRPDVNHSLQMHSSLVRRLSQERELEGHQGCVNAISW-NSKGSLLISG 68
S+ L R P + Q R +++L GH GCVNAI + N+ G L+SG
Sbjct: 13 SVVGFLSQRGLHGDPLLTQDFQRRRLRGCRNLYKKDLLGHFGCVNAIEFSNNGGQWLVSG 72
Query: 69 SDDTHINVW----SYSSRKLLHSIETGHSANVFCTKFVPETSDELVVSGAGDAEVRLFNL 124
DD + +W + SR ++ H +N+FC F + + V SG D +V L ++
Sbjct: 73 GDDRRVLLWHMEQAIHSRVKPIQLKGEHHSNIFCLAF--NSGNTKVFSGGNDEQVILHDV 130
Query: 125 SRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHVVWSASEDGTLRQHDFRQGSSCP 184
S LD A H V L+V N ++ S+S+DG + D R+
Sbjct: 131 E--SSETLDVFA---------HEDAVYGLSVSPVNDNIFASSSDDGRVLIWDIRESPHGE 179
Query: 185 P 185
P
Sbjct: 180 P 180
Score = 121 (47.7 bits), Expect = 4.2e-13, Sum P(2) = 4.2e-13
Identities = 31/89 (34%), Positives = 48/89 (53%)
Query: 621 GHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQT-------GRLIK---MLL-GDE 669
G+ N T +K F G R YI SGSDD ++W GR++ M+L G
Sbjct: 275 GYFNSCT-MKSCCFAGDRDQYILSGSDDFNLYMWRIPADPEAGGIGRVVNGAFMVLKGHR 333
Query: 670 AVVNCVQCHPFDCVVATSGIDNTIKIWTP 698
++VN V+ +P ++ +SG++ IKIW+P
Sbjct: 334 SIVNQVRFNPHTYMICSSGVEKIIKIWSP 362
Score = 56 (24.8 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 25/113 (22%), Positives = 51/113 (45%)
Query: 643 ASGSDDGRWFIWE-KQTGRLIKMLLGD-EAVVNCVQCHPFDC-VVATSGIDNTIKIWTPS 699
AS SDDGR IW+ +++ L + + + V +P + ++AT+ + +W
Sbjct: 159 ASSSDDGRVLIWDIRESPHGEPFCLANYPSAFHSVMFNPVEPRLLATANSKEGVGLWDIR 218
Query: 700 ASVPSIVS-GGAAGPDTADVLEAMESNQRKLS-RNREHSLSYELLERFHMHEF 750
S++ GG +A + + + L+ R R + Y++ R + +F
Sbjct: 219 KPQSSLLRYGGNLSLQSAMSVRFNSNGTQLLALRRRLPPVLYDIHSRLPVFQF 271
Score = 40 (19.1 bits), Expect = 9.2e-05, Sum P(2) = 9.2e-05
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 217 SLKSCDISSTRPHLLLVGGSDAFARLY 243
++KSC + R +L GSD F LY
Sbjct: 281 TMKSCCFAGDRDQYIL-SGSDDF-NLY 305
>ASPGD|ASPL0000006214 [details] [associations]
symbol:AN6385 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACD01000108
HOGENOM:HOG000091642 RefSeq:XP_663989.1 ProteinModelPortal:Q5AZ95
EnsemblFungi:CADANIAT00006594 GeneID:2871285 KEGG:ani:AN6385.2
OMA:LHPFEGH OrthoDB:EOG42NN9D Uniprot:Q5AZ95
Length = 434
Score = 144 (55.7 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 59/209 (28%), Positives = 97/209 (46%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
LEGH + ++++ G LL SGS+DT I +W +S L ++E GHS++V F P
Sbjct: 37 LEGHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGGLKQTLE-GHSSSVQSVAFSP-- 93
Query: 106 SDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAV----EVGNPH 161
+ +L+ SG+ D ++L+N + S + + H+ RV+ +A ++ NP
Sbjct: 94 NGQLLASGSSDTTIKLWNSASDSLKHTMEG----------HSDRVESVAFSPNGQLWNPA 143
Query: 162 VVWSASEDGTLRQH-DFRQGSSCPPAG---SSHQECRNILL--DLRCGAKRSLADPPKQT 215
+ S T+ H D+ + P G +S + I L CG K +L
Sbjct: 144 I---GSLKHTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSATCGLKHTLGGHSNWV 200
Query: 216 LSLKSCDISSTRPHLLLVGGSDAFARLYD 244
L L + S LL G +DA +L+D
Sbjct: 201 LPL----VFSPDGRLLASGSNDATIKLWD 225
Score = 130 (50.8 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 27/83 (32%), Positives = 49/83 (59%)
Query: 41 SQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTK 100
S + LEGH + +++++ G LL SGS D I +W ++ H+++ GHS V
Sbjct: 230 SLKHTLEGHSNKIESLAFSPNGQLLASGSSDATIKLWDTATGSFRHTLK-GHSDMVLSVV 288
Query: 101 FVPETSDELVVSGAGDAEVRLFN 123
F P++ +L+ SG+GD ++L++
Sbjct: 289 FSPDS--QLLESGSGDNTIKLWD 309
Score = 121 (47.7 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 25/61 (40%), Positives = 37/61 (60%)
Query: 43 ERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFV 102
++ LEGH V +++++ G LL SGS DT I +W+ +S L H++E GHS V F
Sbjct: 76 KQTLEGHSSSVQSVAFSPNGQLLASGSSDTTIKLWNSASDSLKHTME-GHSDRVESVAFS 134
Query: 103 P 103
P
Sbjct: 135 P 135
Score = 121 (47.7 bits), Expect = 0.00095, Sum P(2) = 0.00095
Identities = 30/85 (35%), Positives = 47/85 (55%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L GH V + ++ G LL SGS+D I +W S L H++E GHS + F P
Sbjct: 193 LGGHSNWVLPLVFSPDGRLLASGSNDATIKLWDPPSGSLKHTLE-GHSNKIESLAFSP-- 249
Query: 106 SDELVVSGAGDAEVRLFNLSRFSGR 130
+ +L+ SG+ DA ++L++ + S R
Sbjct: 250 NGQLLASGSSDATIKLWDTATGSFR 274
Score = 104 (41.7 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 27/88 (30%), Positives = 40/88 (45%)
Query: 615 MKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNC 674
+K GH N I+ +F G +ASGS D +W+ TG L G +V
Sbjct: 231 LKHTLEGHSN---KIESLAF-SPNGQLLASGSSDATIKLWDTATGSFRHTLKGHSDMVLS 286
Query: 675 VQCHPFDCVVATSGIDNTIKIWTPSASV 702
V P ++ + DNTIK+W P+ +
Sbjct: 287 VVFSPDSQLLESGSGDNTIKLWDPATGI 314
Score = 80 (33.2 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 21/71 (29%), Positives = 34/71 (47%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW-T 697
G +ASGS+D +W+ +G L L G + + P ++A+ D TIK+W T
Sbjct: 209 GRLLASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPNGQLLASGSSDATIKLWDT 268
Query: 698 PSASVPSIVSG 708
+ S + G
Sbjct: 269 ATGSFRHTLKG 279
Score = 69 (29.3 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 22/83 (26%), Positives = 41/83 (49%)
Query: 41 SQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTK 100
S + +EGH V +++++ G L W+ + L H+IE GHS V
Sbjct: 116 SLKHTMEGHSDRVESVAFSPNGQL------------WNPAIGSLKHTIE-GHSDWVLSVA 162
Query: 101 FVPETSDELVVSGAGDAEVRLFN 123
F P+ +L+ SG+ + ++L++
Sbjct: 163 FSPD--GQLLASGSAEKTIKLWD 183
Score = 49 (22.3 bits), Expect = 3.3e-07, Sum P(3) = 3.3e-07
Identities = 22/70 (31%), Positives = 35/70 (50%)
Query: 271 HLSEHGRSSLHLTHVTFSPNGEEVLLSYSGEHVYLMDVNHAGGRAMRYTV-GDASKIMS- 328
H E G S+ + + FSPNG+ + S + L D A G + R+T+ G + ++S
Sbjct: 233 HTLE-GHSN-KIESLAFSPNGQLLASGSSDATIKLWDT--ATG-SFRHTLKGHSDMVLSV 287
Query: 329 -FTPTLNGLE 337
F+P LE
Sbjct: 288 VFSPDSQLLE 297
Score = 43 (20.2 bits), Expect = 0.00040, Sum P(3) = 0.00040
Identities = 19/45 (42%), Positives = 22/45 (48%)
Query: 208 LADPP----KQTLSLKSCDISSTR--PH--LLLVGGSDAFARLYD 244
L DPP K TL S I S P+ LL G SDA +L+D
Sbjct: 223 LWDPPSGSLKHTLEGHSNKIESLAFSPNGQLLASGSSDATIKLWD 267
Score = 42 (19.8 bits), Expect = 3.3e-07, Sum P(3) = 3.3e-07
Identities = 9/35 (25%), Positives = 18/35 (51%)
Query: 642 IASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQ 676
+ SGS D +W+ TG ++K + +V ++
Sbjct: 296 LESGSGDNTIKLWDPATG-ILKHSMRTPGIVRSIE 329
>ZFIN|ZDB-GENE-040426-1954 [details] [associations]
symbol:katnb1 "katanin p80 (WD repeat containing)
subunit B 1" species:7955 "Danio rerio" [GO:0008017 "microtubule
binding" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1954 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 HOGENOM:HOG000008039 GO:GO:0008352
HAMAP:MF_03022 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
EMBL:BC047819 IPI:IPI00483795 RefSeq:NP_998183.1 UniGene:Dr.76809
ProteinModelPortal:Q7ZUV2 Ensembl:ENSDART00000014632 GeneID:406291
KEGG:dre:406291 InParanoid:Q7ZUV2 OMA:YWERNDI OrthoDB:EOG470TGV
NextBio:20817922 ArrayExpress:Q7ZUV2 Bgee:Q7ZUV2 Uniprot:Q7ZUV2
Length = 694
Score = 126 (49.4 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 42/154 (27%), Positives = 73/154 (47%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L GH V I +NS +++GS + +W + K+L ++ GH A++ F P
Sbjct: 59 LTGHTSAVGCIQFNSSEERVVAGSLSGSLRLWDLEAAKILRTL-MGHKASISSLDFHP-- 115
Query: 106 SDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHVVW- 164
E + SG+ D+ ++L+++ R +G Y+ HT+ V+ LA +P W
Sbjct: 116 MGEYLASGSVDSNIKLWDVRR---KGCVFR-------YKGHTQAVRCLAF---SPDGKWL 162
Query: 165 -SASEDGTLRQHDFRQGSSCPPAGSSHQECRNIL 197
SAS+D T++ D G +SH N++
Sbjct: 163 ASASDDSTVKLWDLIAGKMITEF-TSHTSAVNVV 195
Score = 120 (47.3 bits), Expect = 9.2e-11, Sum P(2) = 9.2e-11
Identities = 27/82 (32%), Positives = 49/82 (59%)
Query: 44 RELEGHQGCVNA-ISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFV 102
+E+ H V++ + S G LL +G +D +N+W+ S + S+ TGH++ V C +F
Sbjct: 14 QEIVAHSSNVSSLVLGKSSGRLLATGGEDCRVNIWAVSKPNCIMSL-TGHTSAVGCIQF- 71
Query: 103 PETSDELVVSGAGDAEVRLFNL 124
+S+E VV+G+ +RL++L
Sbjct: 72 -NSSEERVVAGSLSGSLRLWDL 92
Score = 117 (46.2 bits), Expect = 9.2e-11, Sum P(2) = 9.2e-11
Identities = 25/79 (31%), Positives = 41/79 (51%)
Query: 618 RYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQC 677
RY GH ++ +F G ++AS SDD +W+ G++I + VN VQ
Sbjct: 142 RYKGHTQA---VRCLAF-SPDGKWLASASDDSTVKLWDLIAGKMITEFTSHTSAVNVVQF 197
Query: 678 HPFDCVVATSGIDNTIKIW 696
HP + ++A+ D T+K+W
Sbjct: 198 HPNEYLLASGSADRTVKLW 216
Score = 95 (38.5 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 27/115 (23%), Positives = 54/115 (46%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIWTP 698
G+Y+ASGS D +W+ + + G V C+ P +A++ D+T+K+W
Sbjct: 117 GEYLASGSVDSNIKLWDVRRKGCVFRYKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDL 176
Query: 699 SASVPSIVSGGAAGPDTADVLEAMESNQRKLSRNREHSLSYELLERFHMHEFSEG 753
A +++ + +V++ + S + + ++ LE+F+M SEG
Sbjct: 177 IAG--KMITEFTSHTSAVNVVQFHPNEYLLASGSADRTVKLWDLEKFNMIGSSEG 229
Score = 68 (29.0 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 19/59 (32%), Positives = 30/59 (50%)
Query: 642 IASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKI--WTP 698
+ASGS D +W+ + +I G+ VV V +P D SG +NT+++ W P
Sbjct: 204 LASGSADRTVKLWDLEKFNMIGSSEGETGVVRSVLFNP-DGSCLYSGSENTLRVYGWEP 261
Score = 39 (18.8 bits), Expect = 2.3e-05, Sum P(3) = 2.3e-05
Identities = 13/51 (25%), Positives = 23/51 (45%)
Query: 282 LTHVTFSPNGEEVLLSYSGEHVYLMDVNHAGGRAMRYTVG-DASKIMSFTP 331
++ + F P GE + ++ L DV G RY A + ++F+P
Sbjct: 108 ISSLDFHPMGEYLASGSVDSNIKLWDVRRKGC-VFRYKGHTQAVRCLAFSP 157
>TAIR|locus:2176085 [details] [associations]
symbol:AT5G64730 "AT5G64730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 KO:K13124 OMA:CKQGAVR EMBL:AY046038
EMBL:AY113956 IPI:IPI00540873 RefSeq:NP_568993.1 UniGene:At.9776
ProteinModelPortal:Q94AH2 SMR:Q94AH2 PaxDb:Q94AH2 PRIDE:Q94AH2
EnsemblPlants:AT5G64730.1 GeneID:836594 KEGG:ath:AT5G64730
TAIR:At5g64730 InParanoid:Q94AH2 PhylomeDB:Q94AH2
ProtClustDB:CLSN2690079 ArrayExpress:Q94AH2 Genevestigator:Q94AH2
Uniprot:Q94AH2
Length = 299
Score = 114 (45.2 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 26/87 (29%), Positives = 42/87 (48%)
Query: 611 TVIDMKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEA 670
T ++ Q Y GH + K L ++ GS+DG F W+ +++ +
Sbjct: 214 TTGELLQVYKGH--ISKSFKTDCCLTNSDAHVIGGSEDGLVFFWDLVDAKVLSKFRAHDL 271
Query: 671 VVNCVQCHPF-DCVVATSGIDNTIKIW 696
VV V HP DC++ TS +D TI++W
Sbjct: 272 VVTSVSYHPKEDCML-TSSVDGTIRVW 297
Score = 110 (43.8 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 32/98 (32%), Positives = 47/98 (47%)
Query: 44 RELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKF-- 101
R+ GH G VNA+ +N S+++S D + VW S HS+E + F
Sbjct: 96 RKFRGHDGEVNAVKFNDSSSVVVSAGFDRSLRVWDCRS----HSVEPVQIIDTFLDTVMS 151
Query: 102 VPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITP 139
V T E ++ G+ D VR F++ R GR + DN P
Sbjct: 152 VVLTKTE-IIGGSVDGTVRTFDM-RI-GREMSDNLGQP 186
Score = 76 (31.8 bits), Expect = 5.2e-07, Sum P(2) = 5.2e-07
Identities = 39/140 (27%), Positives = 60/140 (42%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L+GH+G V A +N G+ ++ D I +W+ R +L H V + V T
Sbjct: 14 LKGHEGAVLAARFNGDGNYALTCGKDRTIRLWN-PHRGILIKTYKSHGREV---RDVHVT 69
Query: 106 SDEL-VVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHVVW 164
SD S GD +V +++S +GR + ++ H V + + VV
Sbjct: 70 SDNAKFCSCGGDRQVYYWDVS--TGRVIRK--------FRGHDGEVNAVKFN-DSSSVVV 118
Query: 165 SASEDGTLRQHDFRQGSSCP 184
SA D +LR D R S P
Sbjct: 119 SAGFDRSLRVWDCRSHSVEP 138
Score = 70 (29.7 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 34/156 (21%), Positives = 56/156 (35%)
Query: 47 EGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPETS 106
+ H V + S + S D + W S+ +++ GH V KF S
Sbjct: 57 KSHGREVRDVHVTSDNAKFCSCGGDRQVYYWDVSTGRVIRKFR-GHDGEVNAVKF--NDS 113
Query: 107 DELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHVVWSA 166
+VVS D +R+++ S + P + V ++V + ++
Sbjct: 114 SSVVVSAGFDRSLRVWDCRSHS--------VEPVQIIDTFLDTV--MSVVLTKTEII-GG 162
Query: 167 SEDGTLRQHDFRQGSSCPPAGSSHQECRNILLDLRC 202
S DGT+R D R G C +I D C
Sbjct: 163 SVDGTVRTFDMRIGREMSDNLGQPVNCISISNDGNC 198
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 124 (48.7 bits), Expect = 3.5e-10, Sum P(2) = 3.5e-10
Identities = 27/80 (33%), Positives = 47/80 (58%)
Query: 46 LEGHQGCVNAISWNSK-GSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPE 104
LEGH+ V AI++N+ G + +GS D +WS + K H+ GH+A + C F P+
Sbjct: 130 LEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFR-GHTAEIVCLSFNPQ 188
Query: 105 TSDELVVSGAGDAEVRLFNL 124
++ LV +G+ D +L+++
Sbjct: 189 ST--LVATGSMDTTAKLWDI 206
Score = 101 (40.6 bits), Expect = 3.5e-10, Sum P(2) = 3.5e-10
Identities = 25/77 (32%), Positives = 40/77 (51%)
Query: 621 GHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPF 680
GH +I SF GD I +GS D +W+ TGR + +L+G A ++ + +
Sbjct: 217 GH---SAEIISLSF-NTSGDRIITGSFDHTVVVWDADTGRKVNILIGHCAEISSASFN-W 271
Query: 681 DC-VVATSGIDNTIKIW 696
DC ++ T +D T K+W
Sbjct: 272 DCSLILTGSMDKTCKLW 288
Score = 96 (38.9 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 23/70 (32%), Positives = 41/70 (58%)
Query: 628 DIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGD-EAVVNCVQCHPFDCVVAT 686
+I + SF Q G+++ +GS D IW+ QTG+ +++L G + + +C + + V+ T
Sbjct: 347 EISKISFNPQ-GNHLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGNIVI-T 404
Query: 687 SGIDNTIKIW 696
DNT +IW
Sbjct: 405 GSKDNTCRIW 414
Score = 92 (37.4 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 20/72 (27%), Positives = 40/72 (55%)
Query: 48 GHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPETSD 107
GH + +S+N + +L+ +GS DT +W + + ++++ GHSA + F TS
Sbjct: 175 GHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGEEVYTLR-GHSAEIISLSF--NTSG 231
Query: 108 ELVVSGAGDAEV 119
+ +++G+ D V
Sbjct: 232 DRIITGSFDHTV 243
Score = 89 (36.4 bits), Expect = 6.8e-06, Sum P(2) = 6.8e-06
Identities = 24/79 (30%), Positives = 44/79 (55%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSS-RKLLHSIETGHSANVFCTKFVPE 104
L GH + ++S+N+ G +I+GS D + VW + RK+ +I GH A + F +
Sbjct: 215 LRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRKV--NILIGHCAEISSASFNWD 272
Query: 105 TSDELVVSGAGDAEVRLFN 123
S L+++G+ D +L++
Sbjct: 273 CS--LILTGSMDKTCKLWD 289
Score = 77 (32.2 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 21/79 (26%), Positives = 41/79 (51%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L+ H + ++ N GS I+GS D +W +S + L+++E GH V+ F
Sbjct: 88 LKAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELNTLE-GHRNVVYAIAFNNPY 146
Query: 106 SDELVVSGAGDAEVRLFNL 124
D+ + +G+ D +L+++
Sbjct: 147 GDK-IATGSFDKTCKLWSV 164
Score = 75 (31.5 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 22/80 (27%), Positives = 40/80 (50%)
Query: 620 VGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLG-DEAVVNCVQCH 678
+GHC +I ASF I +GS D +W+ G+ + L G D+ +++ C
Sbjct: 258 IGHC---AEISSASF-NWDCSLILTGSMDKTCKLWDATNGKCVATLTGHDDEILD--SCF 311
Query: 679 PFDC-VVATSGIDNTIKIWT 697
+ ++AT+ D T +I++
Sbjct: 312 DYTGKLIATASADGTARIFS 331
Score = 68 (29.0 bits), Expect = 8.7e-07, Sum P(2) = 8.7e-07
Identities = 18/58 (31%), Positives = 27/58 (46%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW 696
G IA+ S DG I+ T + I L G E ++ + +P + T D T +IW
Sbjct: 315 GKLIATASADGTARIFSAATRKCIAKLEGHEGEISKISFNPQGNHLLTGSSDKTARIW 372
Score = 42 (19.8 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 10/47 (21%), Positives = 22/47 (46%)
Query: 282 LTHVTFSPNGEEVLLSYSGEHVYLMDVNHAGGRAMRYTVGDASKIMS 328
++ ++F+P G +L S + + D G+ ++ G +I S
Sbjct: 348 ISKISFNPQGNHLLTGSSDKTARIWDAQT--GQCLQVLEGHTDEIFS 392
Score = 40 (19.1 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 8/14 (57%), Positives = 10/14 (71%)
Query: 231 LLVGGSDAFARLYD 244
LL G SD AR++D
Sbjct: 360 LLTGSSDKTARIWD 373
>ZFIN|ZDB-GENE-050419-255 [details] [associations]
symbol:daw1 "dynein assembly factor with WDR repeat
domains 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0070286 "axonemal dynein
complex assembly" evidence=IMP] [GO:0060271 "cilium morphogenesis"
evidence=IMP] [GO:0060285 "ciliary cell motility" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-050419-255 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007368
GeneTree:ENSGT00700000104017 GO:GO:0060271 GO:GO:0070286
GO:GO:0060285 EMBL:BX908751 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:BC124403 EMBL:BC124455 IPI:IPI00504169
RefSeq:NP_001037817.1 UniGene:Dr.108235 ProteinModelPortal:Q1LV15
Ensembl:ENSDART00000142790 GeneID:556760 KEGG:dre:556760
InParanoid:Q05AM0 NextBio:20881649 ArrayExpress:Q1LV15 Bgee:Q1LV15
Uniprot:Q1LV15
Length = 415
Score = 115 (45.5 bits), Expect = 4.0e-10, Sum P(2) = 4.0e-10
Identities = 26/80 (32%), Positives = 47/80 (58%)
Query: 46 LEGHQGCVNAISWNSK-GSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPE 104
LEGH+ V AI++N+ G + +GS D +WS + K ++ GH+A + C F P+
Sbjct: 130 LEGHRNVVYAIAFNNPYGDKVATGSFDKTCKLWSAETGKCFYTFR-GHTAEIVCLAFNPQ 188
Query: 105 TSDELVVSGAGDAEVRLFNL 124
++ LV +G+ D +L+++
Sbjct: 189 ST--LVATGSMDTTAKLWDV 206
Score = 110 (43.8 bits), Expect = 4.0e-10, Sum P(2) = 4.0e-10
Identities = 20/59 (33%), Positives = 37/59 (62%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDC-VVATSGIDNTIKIW 696
GD + +GS D +W+ +GR + +L G ++CVQ + +DC ++AT+ +D + K+W
Sbjct: 231 GDRLVTGSFDHTAILWDVPSGRKVHVLSGHRGEISCVQFN-WDCSLIATASLDKSCKVW 288
Score = 94 (38.1 bits), Expect = 6.2e-08, Sum P(2) = 6.2e-08
Identities = 24/80 (30%), Positives = 42/80 (52%)
Query: 44 RELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP 103
R L+ H + +++N GS I+GS D +W +S + LH++E GH V+ F
Sbjct: 86 RALQAHILPLTNVAFNKSGSCFITGSYDRTCKIWDTASGEELHTLE-GHRNVVYAIAFNN 144
Query: 104 ETSDELVVSGAGDAEVRLFN 123
D+ V +G+ D +L++
Sbjct: 145 PYGDK-VATGSFDKTCKLWS 163
Score = 72 (30.4 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 19/70 (27%), Positives = 35/70 (50%)
Query: 628 DIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLG-DEAVVNCVQCHPFDCVVAT 686
+I + F Q G + + S D +W +TG +++L G + + +C + D ++ T
Sbjct: 347 EISKVCFNAQ-GSRVLTASVDKTSRVWCVKTGACLQVLEGHSDEIFSCAFNYEGDTII-T 404
Query: 687 SGIDNTIKIW 696
DNT +IW
Sbjct: 405 GSKDNTCRIW 414
Score = 59 (25.8 bits), Expect = 6.9e-05, Sum P(2) = 6.9e-05
Identities = 15/58 (25%), Positives = 28/58 (48%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW 696
G IA+ S DG ++ T + + L G + ++ V + V T+ +D T ++W
Sbjct: 315 GQLIATASADGTSRVFSTDTFQCLCQLEGHKGEISKVCFNAQGSRVLTASVDKTSRVW 372
Score = 55 (24.4 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 15/56 (26%), Positives = 29/56 (51%)
Query: 642 IASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIWT 697
IA+ S D +W+ + G+ + LLG V V + ++AT+ D T ++++
Sbjct: 276 IATASLDKSCKVWDAEGGQCLATLLGHNDEVLDVCFNYTGQLIATASADGTSRVFS 331
>DICTYBASE|DDB_G0288375 [details] [associations]
symbol:lis1 "lissencephaly-1 homolog protein"
species:44689 "Dictyostelium discoideum" [GO:0071539 "protein
localization to centrosome" evidence=IMP] [GO:0019933
"cAMP-mediated signaling" evidence=IGI] [GO:0051645 "Golgi
localization" evidence=IMP] [GO:0051642 "centrosome localization"
evidence=IMP] [GO:0045504 "dynein heavy chain binding"
evidence=IPI] [GO:0031592 "centrosomal corona" evidence=IDA]
[GO:0017048 "Rho GTPase binding" evidence=IPI] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0051301 "cell division" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 dictyBase:DDB_G0288375
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0019933 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CM000154_GR GO:GO:0051642
GO:GO:0051645 EMBL:AAFI02000111 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 HSSP:P63005 GO:GO:0031592 GO:GO:0071539 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AJ512336
EMBL:AJ512794 RefSeq:XP_636715.1 ProteinModelPortal:Q8I0F4
SMR:Q8I0F4 STRING:Q8I0F4 EnsemblProtists:DDB0219930 GeneID:8626591
KEGG:ddi:DDB_G0288375 ProtClustDB:CLSZ2429884 Uniprot:Q8I0F4
Length = 419
Score = 113 (44.8 bits), Expect = 5.4e-10, Sum P(2) = 5.4e-10
Identities = 38/163 (23%), Positives = 75/163 (46%)
Query: 39 RLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFC 98
R ++ L GH+ C+N++ ++ SL++S S+D I VW + S + +++ GH+ V
Sbjct: 95 RPPEKHILTGHRNCINSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLK-GHTNAVQD 153
Query: 99 TKFVPETSDELVVSGAGDAEVRLFNLSRFSG----RGLDDNA----ITPSALYQCHTRRV 150
F + + L+ S + D ++L++ + G D N TPS + R
Sbjct: 154 IDF--DKTGNLLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQLISSSRD 211
Query: 151 KKLAV-EVGNPHVVWS-ASEDGTLRQHDFRQGSSCPPAGSSHQ 191
K + V E + + + + +R+ + SC + S+ Q
Sbjct: 212 KTIKVWEAATGYCIKTLVGHEDWVRKITVSEDGSCIASCSNDQ 254
Score = 111 (44.1 bits), Expect = 5.4e-10, Sum P(2) = 5.4e-10
Identities = 28/95 (29%), Positives = 47/95 (49%)
Query: 605 IPYQPETVIDMKQRYVGHCNVGTDIKQA---SFLGQRGDYIASGSDDGRWFIWEKQTGRL 661
+ + +ID+ + + +KQ + +GQ G Y+A+GS D IWE TGR
Sbjct: 280 LAFSTANIIDIPGSLLSTPEGKSKVKQGPGGNLVGQCG-YLATGSRDKTIKIWELATGRC 338
Query: 662 IKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW 696
+ +G + V V+ HP + + G D TI++W
Sbjct: 339 LATYIGHDNWVRAVRFHPCGKFLLSVGDDKTIRVW 373
Score = 95 (38.5 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 26/82 (31%), Positives = 42/82 (51%)
Query: 619 YVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCH 678
Y+GH N ++ F G ++ S DD +W+ GR IK + +EA + + C
Sbjct: 342 YIGHDNW---VRAVRF-HPCGKFLLSVGDDKTIRVWDIAQGRCIKTI--NEAHTHFISCL 395
Query: 679 PFDCV----VATSGIDNTIKIW 696
F C+ +AT G+D+ IK+W
Sbjct: 396 DF-CLHNPHIATGGVDDVIKVW 416
Score = 65 (27.9 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 20/71 (28%), Positives = 34/71 (47%)
Query: 44 RELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP 103
+ L GH+ V I+ + GS + S S+D I W+ + L + HS V C F
Sbjct: 226 KTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTWNIVKGECLATYRE-HSHVVECLAF-- 282
Query: 104 ETSDELVVSGA 114
T++ + + G+
Sbjct: 283 STANIIDIPGS 293
>ASPGD|ASPL0000032070 [details] [associations]
symbol:fbx23 species:162425 "Emericella nidulans"
[GO:0071482 "cellular response to light stimulus" evidence=IMP]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:BN001305 KO:K03362 EMBL:AACD01000096
OrthoDB:EOG4HQHSG RefSeq:XP_663197.1 ProteinModelPortal:Q5B1I7
EnsemblFungi:CADANIAT00003484 GeneID:2871879 KEGG:ani:AN5593.2
HOGENOM:HOG000191354 OMA:TNFQLPH Uniprot:Q5B1I7
Length = 854
Score = 149 (57.5 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 29/79 (36%), Positives = 47/79 (59%)
Query: 47 EGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPETS 106
E HQ CV AI + G L+SGS D + VW ++++L H GH+ +V C +F P S
Sbjct: 324 EAHQECVYAIQFI--GKWLVSGSRDKTVRVWDLNTKRLWHRPLIGHTKSVLCLQFNPSPS 381
Query: 107 DELVVSGAGDAEVRLFNLS 125
+++++SG+ D V ++ S
Sbjct: 382 EDIIISGSSDKNVIVWRFS 400
Score = 79 (32.9 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 24/59 (40%), Positives = 29/59 (49%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGI-DNTIKIW 696
GD I S S D IW + G K +G E + CVQ FD SG DNTI+I+
Sbjct: 511 GDEIVSASGDRLIKIWNIRNGACKKTFVGHEKGIACVQ---FDNQRVVSGSNDNTIRIF 566
Score = 71 (30.1 bits), Expect = 6.7e-09, Sum P(2) = 6.7e-09
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 661 LIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW 696
L+ L+G A VN +Q H D +V+ SG D IKIW
Sbjct: 493 LLMTLVGHTAAVNAIQIHG-DEIVSASG-DRLIKIW 526
Score = 44 (20.5 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 19/61 (31%), Positives = 28/61 (45%)
Query: 616 KQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCV 675
K+ +VGH G I F QR + SGS+D I++ + + L G +V V
Sbjct: 534 KKTFVGH-EKG--IACVQFDNQR---VVSGSNDNTIRIFDHASRAEVACLRGHADLVRTV 587
Query: 676 Q 676
Q
Sbjct: 588 Q 588
Score = 39 (18.8 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 16/50 (32%), Positives = 22/50 (44%)
Query: 636 GQRGDYIASGSDDGRWFIWEK-QTGRLI--KMLLGDEAVVNCV---QCHP 679
G + I SGS D IW+K + G+ + + L EA N HP
Sbjct: 660 GSKWARIVSGSYDESIIIWKKDRKGQWVVSQNLRQAEAAANAAYVAHSHP 709
>UNIPROTKB|Q0P593 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9913 "Bos taurus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BC120334 IPI:IPI00712806 RefSeq:NP_001069398.1
UniGene:Bt.25265 ProteinModelPortal:Q0P593 PRIDE:Q0P593
GeneID:530118 KEGG:bta:530118 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 InParanoid:Q0P593 OrthoDB:EOG44BB28
NextBio:20875184 Uniprot:Q0P593
Length = 415
Score = 124 (48.7 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 27/80 (33%), Positives = 47/80 (58%)
Query: 46 LEGHQGCVNAISWNSK-GSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPE 104
LEGH+ V AI++N+ G + +GS D +WS + K H+ GH+A + C F P+
Sbjct: 130 LEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFR-GHTAEIVCLSFNPQ 188
Query: 105 TSDELVVSGAGDAEVRLFNL 124
++ LV +G+ D +L+++
Sbjct: 189 ST--LVATGSMDTTAKLWDI 206
Score = 118 (46.6 bits), Expect = 0.0010, P = 0.0010
Identities = 23/78 (29%), Positives = 46/78 (58%)
Query: 45 ELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPE 104
+LEGH+G ++ IS+N +G+ L++GS D +W + + L +E GH+ +F F
Sbjct: 340 KLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDAQTGQCLQVLE-GHTDEIFSCAF--N 396
Query: 105 TSDELVVSGAGDAEVRLF 122
+++++G+ D R++
Sbjct: 397 YKGDIIITGSKDNTCRIW 414
Score = 96 (38.9 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 23/70 (32%), Positives = 40/70 (57%)
Query: 628 DIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGD-EAVVNCVQCHPFDCVVAT 686
+I + SF Q G+ + +GS D IW+ QTG+ +++L G + + +C + D ++ T
Sbjct: 347 EISKISFNPQ-GNRLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGDIII-T 404
Query: 687 SGIDNTIKIW 696
DNT +IW
Sbjct: 405 GSKDNTCRIW 414
Score = 96 (38.9 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 22/75 (29%), Positives = 41/75 (54%)
Query: 48 GHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPETSD 107
GH + +S+N + +L+ +GS DT +W S + + ++ TGHSA + F TS
Sbjct: 175 GHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSGEEVFTL-TGHSAEIISLSF--NTSG 231
Query: 108 ELVVSGAGDAEVRLF 122
+++G+ D V ++
Sbjct: 232 NRIITGSFDHTVTVW 246
Score = 92 (37.4 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 25/77 (32%), Positives = 39/77 (50%)
Query: 621 GHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPF 680
GH +I SF G+ I +GS D +WE TGR + L+G A ++ + +
Sbjct: 217 GH---SAEIISLSF-NTSGNRIITGSFDHTVTVWEADTGRKVYTLIGHCAEISSAVFN-W 271
Query: 681 DC-VVATSGIDNTIKIW 696
DC ++ T +D T K+W
Sbjct: 272 DCSLILTGSMDKTCKLW 288
Score = 92 (37.4 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 21/78 (26%), Positives = 45/78 (57%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L GH + ++S+N+ G+ +I+GS D + VW + + ++++ GH A + F +
Sbjct: 215 LTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTL-IGHCAEISSAVFNWDC 273
Query: 106 SDELVVSGAGDAEVRLFN 123
S L+++G+ D +L++
Sbjct: 274 S--LILTGSMDKTCKLWD 289
Score = 84 (34.6 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 25/99 (25%), Positives = 48/99 (48%)
Query: 26 VNHSLQMHSSLVRRLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLL 85
+ + L HS+ + + L H + ++ N GS I+GS D +W +S + L
Sbjct: 70 LQNKLGQHSN--HKFYLFKVLRAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEEL 127
Query: 86 HSIETGHSANVFCTKFVPETSDELVVSGAGDAEVRLFNL 124
H++E GH V+ F D+ + +G+ D +L+++
Sbjct: 128 HTLE-GHRNVVYAIAFNNPYGDK-IATGSFDKTCKLWSV 164
Score = 75 (31.5 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 19/78 (24%), Positives = 41/78 (52%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L GH +++ +N SL+++GS D +W + K + ++ TGH + + F +
Sbjct: 257 LIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDAVNGKCVATL-TGHDDEILDSCF--DY 313
Query: 106 SDELVVSGAGDAEVRLFN 123
+ +L+ + + D R+F+
Sbjct: 314 TGKLIATASADGTARIFS 331
Score = 68 (29.0 bits), Expect = 8.7e-07, Sum P(2) = 8.7e-07
Identities = 21/80 (26%), Positives = 39/80 (48%)
Query: 620 VGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLG-DEAVVNCVQCH 678
+GHC +I A F I +GS D +W+ G+ + L G D+ +++ C
Sbjct: 258 IGHC---AEISSAVF-NWDCSLILTGSMDKTCKLWDAVNGKCVATLTGHDDEILD--SCF 311
Query: 679 PFDC-VVATSGIDNTIKIWT 697
+ ++AT+ D T +I++
Sbjct: 312 DYTGKLIATASADGTARIFS 331
Score = 65 (27.9 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 17/58 (29%), Positives = 26/58 (44%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW 696
G IA+ S DG I+ T + L G E ++ + +P + T D T +IW
Sbjct: 315 GKLIATASADGTARIFSAATRECVTKLEGHEGEISKISFNPQGNRLLTGSSDKTARIW 372
Score = 42 (19.8 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 10/47 (21%), Positives = 22/47 (46%)
Query: 282 LTHVTFSPNGEEVLLSYSGEHVYLMDVNHAGGRAMRYTVGDASKIMS 328
++ ++F+P G +L S + + D G+ ++ G +I S
Sbjct: 348 ISKISFNPQGNRLLTGSSDKTARIWDAQT--GQCLQVLEGHTDEIFS 392
Score = 40 (19.1 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 8/14 (57%), Positives = 10/14 (71%)
Query: 231 LLVGGSDAFARLYD 244
LL G SD AR++D
Sbjct: 360 LLTGSSDKTARIWD 373
>UNIPROTKB|F1NUJ8 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005814 "centriole" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:AADN02052960
EMBL:AADN02052961 EMBL:AADN02052962 EMBL:AADN02052963
IPI:IPI00603564 Ensembl:ENSGALT00000002196 Uniprot:F1NUJ8
Length = 320
Score = 119 (46.9 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 36/133 (27%), Positives = 62/133 (46%)
Query: 41 SQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTK 100
S ER GH+ + ++ ++ L SGS D+ + +WS + + + GH V C +
Sbjct: 11 SLERHFRGHRDAITSVDFSLNKKQLASGSMDSCLKIWSMKPQMRAYCL-VGHKDAVMCVQ 69
Query: 101 FVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNP 160
F P S LV SG+ D V L+ + G S +++ HT V+ +
Sbjct: 70 FSP--SGHLVASGSRDKTVCLW-VPSVKGE---------STVFKAHTATVRSVHFSSDGQ 117
Query: 161 HVVWSASEDGTLR 173
+V +AS+D T++
Sbjct: 118 SLV-TASDDKTIK 129
Score = 106 (42.4 bits), Expect = 6.6e-06, Sum P(2) = 6.6e-06
Identities = 24/77 (31%), Positives = 41/77 (53%)
Query: 47 EGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPETS 106
+ H V ++ ++S G L++ SDD I VW+ +K L S+ H V C +F P+
Sbjct: 101 KAHTATVRSVHFSSDGQSLVTASDDKTIKVWTVHRQKFLFSLSQ-HINWVRCARFSPD-- 157
Query: 107 DELVVSGAGDAEVRLFN 123
L+ S + D V+L++
Sbjct: 158 GRLIASASDDKTVKLWD 174
Score = 97 (39.2 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 20/58 (34%), Positives = 28/58 (48%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW 696
G IAS SDD +W+K + I N V+ HP +A +G D T+K+W
Sbjct: 158 GRLIASASDDKTVKLWDKTSRECIHSFCEHGGFANHVEFHPSGTCIAAAGTDKTVKVW 215
Score = 75 (31.5 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 23/91 (25%), Positives = 38/91 (41%)
Query: 612 VIDMKQ-RYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEA 670
V D++ R + H V T + G+Y+ + S+D I + GRL+ L G +
Sbjct: 214 VWDVRMNRLLQHYQVHTAAVNSLSFHPSGNYLITASNDSTLKILDLLEGRLLYTLHGHQG 273
Query: 671 VVNCVQCHPFDCVVATSGIDNTIKIWTPSAS 701
CV A+ G D + +W + S
Sbjct: 274 PATCVAFSRTGDFFASGGSDEQVMVWKTNFS 304
Score = 70 (29.7 bits), Expect = 7.6e-07, Sum P(2) = 7.6e-07
Identities = 17/57 (29%), Positives = 28/57 (49%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKI 695
G IA+ D +W+ + RL++ A VN + HP + T+ D+T+KI
Sbjct: 200 GTCIAAAGTDKTVKVWDVRMNRLLQHYQVHTAAVNSLSFHPSGNYLITASNDSTLKI 256
Score = 63 (27.2 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 14/58 (24%), Positives = 26/58 (44%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW 696
G + + SDD +W + + L V C + P ++A++ D T+K+W
Sbjct: 116 GQSLVTASDDKTIKVWTVHRQKFLFSLSQHINWVRCARFSPDGRLIASASDDKTVKLW 173
Score = 54 (24.1 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 23/76 (30%), Positives = 37/76 (48%)
Query: 263 CVNYFCPMHLSEHGRSSLHLTHVTFSPNGEEVLLSYSGEHVYLMDVNHAGGRAMR-YTVG 321
C++ FC EHG + HV F P+G + + + + V + DV R ++ Y V
Sbjct: 180 CIHSFC-----EHGGFA---NHVEFHPSGTCIAAAGTDKTVKVWDVRM--NRLLQHYQVH 229
Query: 322 DAS-KIMSFTPTLNGL 336
A+ +SF P+ N L
Sbjct: 230 TAAVNSLSFHPSGNYL 245
>WB|WBGene00015974 [details] [associations]
symbol:C18E3.5 species:6239 "Caenorhabditis elegans"
[GO:0018991 "oviposition" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0018991 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 HOGENOM:HOG000091644
OMA:HAGSVNE EMBL:FO080611 GeneTree:ENSGT00690000101787
RefSeq:NP_491325.1 ProteinModelPortal:O02097 SMR:O02097
STRING:O02097 PaxDb:O02097 EnsemblMetazoa:C18E3.5.1
EnsemblMetazoa:C18E3.5.2 GeneID:172015 KEGG:cel:CELE_C18E3.5
UCSC:C18E3.5 CTD:172015 WormBase:C18E3.5 InParanoid:O02097
NextBio:873669 Uniprot:O02097
Length = 331
Score = 122 (48.0 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 37/133 (27%), Positives = 63/133 (47%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L+GH G + ++S GS L S D I +W+ ++ GH + KF ++
Sbjct: 32 LQGHGGEIYTSQFSSDGSFLASAGYDQQIFLWNVFGECENFAVLKGHKGAIMEVKFNADS 91
Query: 106 SDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHVVWS 165
S +VS D VR++++ +G + + ++ HT V + V P ++ S
Sbjct: 92 SH--LVSAGTDKTVRVWDME--TGSCIRN--------FKSHTDIVNSVDVNRRGPQMICS 139
Query: 166 ASEDGTLRQHDFR 178
AS+DGT+ HD R
Sbjct: 140 ASDDGTVMVHDMR 152
Score = 90 (36.7 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 22/88 (25%), Positives = 41/88 (46%)
Query: 606 PYQPETVIDMKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKML 665
P+ P + + + H N ++ + + R +YI +GS D ++W ++ + L
Sbjct: 236 PFVPAQRLVARYQGASH-NFEKNLLKCGW-SPRDNYITAGSADRFVYVWNAKSRACVYKL 293
Query: 666 LGDEAVVNCVQCHPFDCVVATSGIDNTI 693
G VNC HP ++ ++G D TI
Sbjct: 294 PGHLGSVNCTALHPTQQILLSAGSDKTI 321
>UNIPROTKB|Q5ZIU8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0000922 "spindle
pole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 HOGENOM:HOG000008039
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 EMBL:DQ410670
EMBL:AJ720686 IPI:IPI00822740 RefSeq:NP_001025730.1
UniGene:Gga.7972 ProteinModelPortal:Q5ZIU8 GeneID:415631
KEGG:gga:415631 CTD:10300 HOVERGEN:HBG052294 NextBio:20819203
Uniprot:Q5ZIU8
Length = 657
Score = 125 (49.1 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 40/137 (29%), Positives = 69/137 (50%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L GH + ++ ++K L+++GS I VW + K+L ++ GH AN+ F P
Sbjct: 59 LTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTL-LGHKANICSLDFHPYG 117
Query: 106 SDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHVVW- 164
S V SG+ D +++L+++ R +G I Y+ HT+ V+ L +P W
Sbjct: 118 S--FVASGSLDTDIKLWDVRR---KG----CIFK---YKSHTQAVRCLRF---SPDGKWL 162
Query: 165 -SASEDGTLRQHDFRQG 180
SA++D T++ D G
Sbjct: 163 ASAADDHTVKLWDLTAG 179
Score = 113 (44.8 bits), Expect = 4.8e-09, Sum P(2) = 4.8e-09
Identities = 33/123 (26%), Positives = 60/123 (48%)
Query: 639 GDYIASGSDDGRWFIWE-KQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIWT 697
G ++ASGS D +W+ ++ G + K +AV C++ P +A++ D+T+K+W
Sbjct: 117 GSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAV-RCLRFSPDGKWLASAADDHTVKLWD 175
Query: 698 PSASVPSIVSGGAAGPDTADVLEAMESNQRKLSRNREHSLSYELLERFHMHEFSEGSLRP 757
+A G +GP +V+E S S + + ++ + LE+FH+ E P
Sbjct: 176 LTAGKVMFEFTGHSGP--VNVVEFHPSEYLLASGSSDRTIRFWDLEKFHVVSCIEEEATP 233
Query: 758 FEC 760
C
Sbjct: 234 VRC 236
Score = 107 (42.7 bits), Expect = 4.8e-09, Sum P(2) = 4.8e-09
Identities = 26/95 (27%), Positives = 53/95 (55%)
Query: 32 MHSSLVRRLSQE-RELEGHQGCVNA-ISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIE 89
M +++V + + + +E+ H V++ + S G LL +G DD +NVWS + + S+
Sbjct: 1 MAAAVVTKTAWKLQEIVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSL- 59
Query: 90 TGHSANVFCTKFVPETSDELVVSGAGDAEVRLFNL 124
TGH+ + + +EL+V+G+ +R+++L
Sbjct: 60 TGHTTPIESLQI--SAKEELIVAGSQSGSIRVWDL 92
Score = 61 (26.5 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 14/67 (20%), Positives = 30/67 (44%)
Query: 642 IASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKI--WTPS 699
+ASGS D W+ + ++ + + V C+ +P C + G +++++ W P
Sbjct: 204 LASGSSDRTIRFWDLEKFHVVSCIEEEATPVRCILFNPDGCCLY-GGFQDSLRVYGWEPE 262
Query: 700 ASVPSIV 706
+V
Sbjct: 263 RCFDVVV 269
>RGD|1565004 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1565004 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OrthoDB:EOG412M5H IPI:IPI00763099
ProteinModelPortal:D4ABU4 Ensembl:ENSRNOT00000038166
UCSC:RGD:1565004 ArrayExpress:D4ABU4 Uniprot:D4ABU4
Length = 324
Score = 116 (45.9 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 27/75 (36%), Positives = 42/75 (56%)
Query: 49 HQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPETSDE 108
H V ++ + S G LL++ SDD + VWS ++ L S+ T H V C KF P+
Sbjct: 102 HTATVRSVHFCSDGQLLVTASDDKTVKVWSTHRQRFLFSL-TQHINWVRCAKFSPD--GR 158
Query: 109 LVVSGAGDAEVRLFN 123
L+VS + D V+L++
Sbjct: 159 LIVSASDDKTVKLWD 173
Score = 114 (45.2 bits), Expect = 6.2e-09, Sum P(2) = 6.2e-09
Identities = 35/133 (26%), Positives = 62/133 (46%)
Query: 41 SQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTK 100
S ER +GH+ V + ++ L SGS D+ + +W + + TGH V C
Sbjct: 10 SLERHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRF-TGHKDAVTCVN 68
Query: 101 FVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNP 160
F P S L+ SG+ D VR++ + G S +++ HT V+ + +
Sbjct: 69 FSP--SGHLLASGSRDKTVRIW-VPNVKGE---------STVFRAHTATVRSVHF-CSDG 115
Query: 161 HVVWSASEDGTLR 173
++ +AS+D T++
Sbjct: 116 QLLVTASDDKTVK 128
Score = 96 (38.9 bits), Expect = 6.2e-09, Sum P(2) = 6.2e-09
Identities = 19/58 (32%), Positives = 28/58 (48%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW 696
G I S SDD +W+K + + V V HP +A +G+DNT+K+W
Sbjct: 157 GRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVW 214
Score = 86 (35.3 bits), Expect = 6.5e-06, Sum P(2) = 6.5e-06
Identities = 22/86 (25%), Positives = 43/86 (50%)
Query: 41 SQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTK 100
S+ GH+ V ++++ G LL SGS D + +W + K ++ H+A V
Sbjct: 52 SRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVH 110
Query: 101 FVPETSDELVVSGAGDAEVRLFNLSR 126
F + +L+V+ + D V++++ R
Sbjct: 111 FCSD--GQLLVTASDDKTVKVWSTHR 134
Score = 81 (33.6 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 21/74 (28%), Positives = 34/74 (45%)
Query: 622 HCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFD 681
+C G + F G IA+ D +W+ +T RL++ A VN + HP
Sbjct: 183 YCEHGGFVTYVDF-HPSGTCIAAAGMDNTVKVWDTRTHRLVQHYQLHSAAVNALSFHPSG 241
Query: 682 CVVATSGIDNTIKI 695
+ T+ D+T+KI
Sbjct: 242 NYLITASSDSTLKI 255
Score = 66 (28.3 bits), Expect = 7.4e-06, Sum P(2) = 7.4e-06
Identities = 14/58 (24%), Positives = 25/58 (43%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW 696
G + + SDD +W R + L V C + P ++ ++ D T+K+W
Sbjct: 115 GQLLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLW 172
Score = 62 (26.9 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 19/79 (24%), Positives = 30/79 (37%)
Query: 618 RYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQC 677
R V H + + A G+Y+ + S D I + GRL+ L G + V
Sbjct: 220 RLVQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAF 279
Query: 678 HPFDCVVATSGIDNTIKIW 696
A+ G D + +W
Sbjct: 280 SRTGEYFASGGSDEQVMVW 298
Score = 47 (21.6 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 621 GHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWE 655
GH T + +F + G+Y ASG D + +W+
Sbjct: 269 GHQGPATTV---AF-SRTGEYFASGGSDEQVMVWK 299
>UNIPROTKB|F6UQ08 [details] [associations]
symbol:F6UQ08 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AAEX03001568 Ensembl:ENSCAFT00000013754 OMA:NTEEYNE
Uniprot:F6UQ08
Length = 581
Score = 124 (48.7 bits), Expect = 0.00037, P = 0.00037
Identities = 39/137 (28%), Positives = 66/137 (48%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L GH V ++ N+ L+++GS I VW + K+L ++ GH AN+ F P
Sbjct: 59 LTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTL-MGHKANICSLDFHPY- 116
Query: 106 SDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHVVW- 164
E V SG+ D ++L+++ R +G Y+ H++ V+ L +P W
Sbjct: 117 -GEFVASGSQDTNIKLWDIRR---KGCVFR-------YRGHSQAVRCLRF---SPDGKWL 162
Query: 165 -SASEDGTLRQHDFRQG 180
SA++D T++ D G
Sbjct: 163 ASAADDHTVKLWDLTAG 179
Score = 109 (43.4 bits), Expect = 9.5e-09, Sum P(2) = 9.5e-09
Identities = 24/82 (29%), Positives = 47/82 (57%)
Query: 44 RELEGHQGCVNA-ISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFV 102
+E+ H V++ + + G LL +G DD +N+WS + + S+ TGH++ V +
Sbjct: 14 QEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSL-TGHTSPVESVRL- 71
Query: 103 PETSDELVVSGAGDAEVRLFNL 124
T +EL+V+G+ +R+++L
Sbjct: 72 -NTPEELIVAGSQSGSIRVWDL 92
Score = 107 (42.7 bits), Expect = 9.5e-09, Sum P(2) = 9.5e-09
Identities = 31/125 (24%), Positives = 57/125 (45%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIWTP 698
G+++ASGS D +W+ + + G V C++ P +A++ D+T+K+W
Sbjct: 117 GEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDL 176
Query: 699 SASVPSIVSGGAAGPDTADVLEAMESNQRKLSRNREHSLSYELLERFHMHEFSEGSLRPF 758
+A G GP +V+E + S + + ++ + LE+F + EG P
Sbjct: 177 TAGKMMSEFPGHTGP--VNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPV 234
Query: 759 ECAQS 763
A S
Sbjct: 235 RYAGS 239
Score = 105 (42.0 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 28/97 (28%), Positives = 45/97 (46%)
Query: 618 RYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQC 677
RY GH ++ F G ++AS +DD +W+ G+++ G VN V+
Sbjct: 142 RYRGHSQA---VRCLRF-SPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEF 197
Query: 678 HPFDCVVATSGIDNTIKIWT-PSASVPSIVSGGAAGP 713
HP + ++A+ D TI+ W V S + G GP
Sbjct: 198 HPNEYLLASGSSDRTIRFWDLEKFQVVSCIEG-EPGP 233
>UNIPROTKB|F1SIZ2 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0005814 "centriole" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:CU914695
ProteinModelPortal:F1SIZ2 Ensembl:ENSSSCT00000012506 Uniprot:F1SIZ2
Length = 367
Score = 113 (44.8 bits), Expect = 9.7e-09, Sum P(2) = 9.7e-09
Identities = 37/133 (27%), Positives = 60/133 (45%)
Query: 41 SQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTK 100
S ER +GH+ V + ++ L SGS D+ + VW + + TGH V C
Sbjct: 41 SLERHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRF-TGHKDAVTCVN 99
Query: 101 FVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNP 160
F P S L+ SG+ D VR++ + G S +++ HT V+ +
Sbjct: 100 FSP--SGHLLASGSRDKTVRIW-VPNIKGE---------STVFRAHTATVRSVHFCSDGQ 147
Query: 161 HVVWSASEDGTLR 173
V +AS+D T++
Sbjct: 148 SFV-TASDDKTIK 159
Score = 106 (42.4 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 26/75 (34%), Positives = 39/75 (52%)
Query: 49 HQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPETSDE 108
H V ++ + S G ++ SDD I VWS +K L S+ H V C KF P+
Sbjct: 133 HTATVRSVHFCSDGQSFVTASDDKTIKVWSTHRQKFLFSLSQ-HINWVRCAKFSPD--GR 189
Query: 109 LVVSGAGDAEVRLFN 123
L+VS + D V+L++
Sbjct: 190 LIVSASDDKTVKLWD 204
Score = 97 (39.2 bits), Expect = 9.7e-09, Sum P(2) = 9.7e-09
Identities = 20/58 (34%), Positives = 28/58 (48%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW 696
G I S SDD +W+K + + V V HP VA +G+DNT+K+W
Sbjct: 188 GRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVW 245
Score = 83 (34.3 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 25/93 (26%), Positives = 45/93 (48%)
Query: 41 SQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANV---- 96
S+ GH+ V ++++ G LL SGS D + +W + K ++ H+A V
Sbjct: 83 SRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIW-VPNIKGESTVFRAHTATVRSVH 141
Query: 97 FCT---KFVPETSDELVVSGAGDAEVRLFNLSR 126
FC+ FV + D+ + + + LF+LS+
Sbjct: 142 FCSDGQSFVTASDDKTIKVWSTHRQKFLFSLSQ 174
Score = 79 (32.9 bits), Expect = 6.9e-07, Sum P(2) = 6.9e-07
Identities = 20/74 (27%), Positives = 34/74 (45%)
Query: 622 HCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFD 681
+C G + F G +A+ D +W+ +T RL++ A VN + HP
Sbjct: 214 YCEHGGFVTYVDF-HPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSG 272
Query: 682 CVVATSGIDNTIKI 695
+ T+ D+T+KI
Sbjct: 273 NYLVTASSDSTLKI 286
Score = 62 (26.9 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 21/92 (22%), Positives = 36/92 (39%)
Query: 612 VIDMK-QRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEA 670
V D++ R + H + + A G+Y+ + S D I + GRL+ L G +
Sbjct: 244 VWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQG 303
Query: 671 VVNCVQCHPFDCVVATSGIDNTIKIWTPSASV 702
V A+ G D + +W + V
Sbjct: 304 PATTVAFSRTGEYFASGGSDEQVMVWKSNFDV 335
>UNIPROTKB|F1MFJ6 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070
GO:GO:0005876 GO:GO:0000118 GeneTree:ENSGT00690000102024
EMBL:DAAA02002018 EMBL:DAAA02002019 EMBL:DAAA02002020
EMBL:DAAA02002021 EMBL:DAAA02002022 EMBL:DAAA02002023
EMBL:DAAA02002024 IPI:IPI00732449 UniGene:Bt.25104
ProteinModelPortal:F1MFJ6 Ensembl:ENSBTAT00000029211 OMA:GYARIWM
NextBio:20899067 Uniprot:F1MFJ6
Length = 514
Score = 150 (57.9 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 40/133 (30%), Positives = 69/133 (51%)
Query: 4 FPFHDGSIYDMLDTRHTDTRPDVNHSLQMHSSLVRRLSQEREL---EGHQGCVNAISWNS 60
FPFH D+ D + +T + + +H V +L Q+R + +GH VNAI W+
Sbjct: 304 FPFHSAPALDV-DWQSNNTFASCSTDMCIH---VCKLGQDRPIKTFQGHTNEVNAIKWDP 359
Query: 61 KGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPE---TSDE----LVVSG 113
G+LL S SDD + +WS +H ++ H+ ++ K+ P TS+ ++ S
Sbjct: 360 TGNLLASCSDDMTLKIWSMKQDNCVHDLQA-HNKEIYTIKWSPTGPGTSNPNANLMLASA 418
Query: 114 AGDAEVRLFNLSR 126
+ D+ VRL+++ R
Sbjct: 419 SFDSTVRLWDVDR 431
Score = 62 (26.9 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 14/29 (48%), Positives = 16/29 (55%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLG 667
G Y+ASGS D IW QTG L+ G
Sbjct: 454 GRYLASGSFDKCVHIWNTQTGALVHSYRG 482
>DICTYBASE|DDB_G0289711 [details] [associations]
symbol:morg1 "mitogen-activated protein kinase
organizer 1" species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005737 "cytoplasm" evidence=IEA;ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0289711 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR EMBL:AAFI02000148 HSSP:P16649 KO:K13124
RefSeq:XP_636074.1 ProteinModelPortal:Q54H44
EnsemblProtists:DDB0233741 GeneID:8627284 KEGG:ddi:DDB_G0289711
OMA:CKQGAVR Uniprot:Q54H44
Length = 325
Score = 110 (43.8 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 28/83 (33%), Positives = 39/83 (46%)
Query: 617 QRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQ 676
+ Y GH N I S I SGS+D ++I+E +G+L+ L G ++ V
Sbjct: 244 KEYKGHKNKVYKINSCSNFDD--SLIISGSEDNDFYIYELLSGKLLSKLSGHSNIITHVD 301
Query: 677 CHPFDCVVATSGIDNTIKIWTPS 699
HP TS D TI+IW S
Sbjct: 302 SHPSKNQFITSSTDCTIRIWDQS 324
Score = 98 (39.6 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 35/146 (23%), Positives = 62/146 (42%)
Query: 39 RLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFC 98
++S + L H G V + +NS G +SGS D I +++ S ++HS E H +
Sbjct: 3 KISCNKVLSNHSGSVTVVKYNSDGGYCLSGSSDKSIKLYNVSKGSMIHSFEE-HGYGI-- 59
Query: 99 TKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVG 158
+ TSD + AE +L+ SG+ + H + + V +
Sbjct: 60 -GDLVSTSDNKQLFSC--AEKQLYQWDIASGQVI-------RRFQNAHNDTITSVCVNLD 109
Query: 159 NPHVVWSASEDGTLRQHDFRQGSSCP 184
+ +++S S D ++ D R S P
Sbjct: 110 ST-LLFSGSSDRLVKAWDLRTKSINP 134
>MGI|MGI:1917485 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1917485 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK154163 EMBL:AK011064
EMBL:BC034901 IPI:IPI00318396 IPI:IPI00323477 IPI:IPI00742304
RefSeq:NP_081630.2 UniGene:Mm.23054 ProteinModelPortal:Q8JZX3
SMR:Q8JZX3 PRIDE:Q8JZX3 Ensembl:ENSMUST00000072206 GeneID:70235
KEGG:mmu:70235 UCSC:uc009rjk.2 UCSC:uc009rjl.2 HOGENOM:HOG000036743
InParanoid:Q8JZX3 NextBio:331220 Bgee:Q8JZX3 CleanEx:MM_WDR51A
Genevestigator:Q8JZX3 GermOnline:ENSMUSG00000023345 Uniprot:Q8JZX3
Length = 405
Score = 113 (44.8 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 36/133 (27%), Positives = 61/133 (45%)
Query: 41 SQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTK 100
S ER +GH+ V + ++ L SGS D+ + +W + + TGH V C
Sbjct: 10 SLERHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRF-TGHKDAVTCVN 68
Query: 101 FVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNP 160
F P S L+ SG+ D VR++ + G S +++ HT V+ +
Sbjct: 69 FSP--SGHLLASGSRDKTVRIW-VPNVKGE---------STVFRAHTATVRSVHFCSDGQ 116
Query: 161 HVVWSASEDGTLR 173
+V +AS+D T++
Sbjct: 117 SLV-TASDDKTVK 128
Score = 110 (43.8 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 26/75 (34%), Positives = 41/75 (54%)
Query: 49 HQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPETSDE 108
H V ++ + S G L++ SDD + VWS ++ L S+ T H V C KF P+
Sbjct: 102 HTATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQRFLFSL-TQHINWVRCAKFSPD--GR 158
Query: 109 LVVSGAGDAEVRLFN 123
L+VS + D V+L++
Sbjct: 159 LIVSASDDKTVKLWD 173
Score = 97 (39.2 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 20/58 (34%), Positives = 28/58 (48%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW 696
G I S SDD +W+K + I V V HP +A +G+DNT+K+W
Sbjct: 157 GRLIVSASDDKTVKLWDKTSRECIHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVW 214
Score = 80 (33.2 bits), Expect = 7.5e-07, Sum P(2) = 7.5e-07
Identities = 21/74 (28%), Positives = 34/74 (45%)
Query: 622 HCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFD 681
+C G + F G IA+ D +W+ +T RL++ A VN + HP
Sbjct: 183 YCEHGGFVTYVDF-HPSGTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNALSFHPSG 241
Query: 682 CVVATSGIDNTIKI 695
+ T+ D+T+KI
Sbjct: 242 NYLITASSDSTLKI 255
Score = 80 (33.2 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 21/86 (24%), Positives = 42/86 (48%)
Query: 41 SQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTK 100
S+ GH+ V ++++ G LL SGS D + +W + K ++ H+A V
Sbjct: 52 SRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVH 110
Query: 101 FVPETSDELVVSGAGDAEVRLFNLSR 126
F + + +V+ + D V++++ R
Sbjct: 111 FCSD--GQSLVTASDDKTVKVWSTHR 134
Score = 65 (27.9 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 14/58 (24%), Positives = 25/58 (43%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW 696
G + + SDD +W R + L V C + P ++ ++ D T+K+W
Sbjct: 115 GQSLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLW 172
Score = 59 (25.8 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 15/58 (25%), Positives = 24/58 (41%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW 696
G+Y+ + S D I + GRL+ L G + V A+ G D + +W
Sbjct: 241 GNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
>UNIPROTKB|Q9BZK7 [details] [associations]
symbol:TBL1XR1 "F-box-like/WD repeat-containing protein
TBL1XR1" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0060070 "canonical Wnt receptor signaling
pathway" evidence=IMP] [GO:0003714 "transcription corepressor
activity" evidence=IGI;IDA] [GO:0042393 "histone binding"
evidence=IDA] [GO:0017053 "transcriptional repressor complex"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISS;IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0008013 "beta-catenin binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=IDA] [GO:0000118
"histone deacetylase complex" evidence=IDA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0047485 "protein N-terminus binding" evidence=IPI] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0007219 "Notch signaling pathway"
evidence=TAS] [GO:0044255 "cellular lipid metabolic process"
evidence=TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_111217 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_111102 GO:GO:0017053 GO:GO:0003714 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0044281 EMBL:CH471052 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0007219
GO:GO:0044255 GO:GO:0006351 GO:GO:0016568 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393
GO:GO:0060070 GO:GO:0005876 KO:K04508 EMBL:AF314544 EMBL:AF268193
EMBL:AK022956 EMBL:BC060320 EMBL:BC113421 IPI:IPI00002922
RefSeq:NP_078941.2 UniGene:Hs.581171 ProteinModelPortal:Q9BZK7
SMR:Q9BZK7 IntAct:Q9BZK7 STRING:Q9BZK7 PhosphoSite:Q9BZK7
DMDM:23396874 PaxDb:Q9BZK7 PRIDE:Q9BZK7 Ensembl:ENST00000430069
Ensembl:ENST00000457928 GeneID:79718 KEGG:hsa:79718 UCSC:uc003fiw.4
CTD:79718 GeneCards:GC03M176737 H-InvDB:HIX0147994 HGNC:HGNC:29529
HPA:HPA019182 MIM:608628 neXtProt:NX_Q9BZK7 PharmGKB:PA134928556
HOGENOM:HOG000220902 HOVERGEN:HBG050240 InParanoid:Q9BZK7
OMA:LANNHAD OrthoDB:EOG412M5M ChiTaRS:TBL1XR1 GenomeRNAi:79718
NextBio:69065 PMAP-CutDB:Q9BZK7 ArrayExpress:Q9BZK7 Bgee:Q9BZK7
CleanEx:HS_TBL1XR1 Genevestigator:Q9BZK7 GermOnline:ENSG00000177565
Uniprot:Q9BZK7
Length = 514
Score = 149 (57.5 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 39/135 (28%), Positives = 70/135 (51%)
Query: 2 ENFPFHDGSIYDMLDTRHTDTRPDVNHSLQMHSSLVRRLSQEREL---EGHQGCVNAISW 58
+ FPFH D+ D + +T + + +H V +L Q+R + +GH VNAI W
Sbjct: 302 QQFPFHSAPALDV-DWQSNNTFASCSTDMCIH---VCKLGQDRPIKTFQGHTNEVNAIKW 357
Query: 59 NSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPE---TSDE----LVV 111
+ G+LL S SDD + +WS +H ++ H+ ++ K+ P T++ ++
Sbjct: 358 DPTGNLLASCSDDMTLKIWSMKQDNCVHDLQA-HNKEIYTIKWSPTGPGTNNPNANLMLA 416
Query: 112 SGAGDAEVRLFNLSR 126
S + D+ VRL+++ R
Sbjct: 417 SASFDSTVRLWDVDR 431
Score = 62 (26.9 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 14/29 (48%), Positives = 16/29 (55%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLG 667
G Y+ASGS D IW QTG L+ G
Sbjct: 454 GRYLASGSFDKCVHIWNTQTGALVHSYRG 482
Score = 53 (23.7 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 15/55 (27%), Positives = 22/55 (40%)
Query: 642 IASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW 696
+AS S D +W+ G I L + V V P +A+ D + IW
Sbjct: 415 LASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIW 469
>UNIPROTKB|F1SGD0 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0017053 GO:GO:0003714 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 GO:GO:0060070 GO:GO:0005876
GO:GO:0000118 GeneTree:ENSGT00690000102024 OMA:GYARIWM
EMBL:CU856317 Ensembl:ENSSSCT00000012871 Uniprot:F1SGD0
Length = 514
Score = 149 (57.5 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 39/135 (28%), Positives = 70/135 (51%)
Query: 2 ENFPFHDGSIYDMLDTRHTDTRPDVNHSLQMHSSLVRRLSQEREL---EGHQGCVNAISW 58
+ FPFH D+ D + +T + + +H V +L Q+R + +GH VNAI W
Sbjct: 302 QQFPFHSAPALDV-DWQSNNTFASCSTDMCIH---VCKLGQDRPIKTFQGHTNEVNAIKW 357
Query: 59 NSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPE---TSDE----LVV 111
+ G+LL S SDD + +WS +H ++ H+ ++ K+ P T++ ++
Sbjct: 358 DPTGNLLASCSDDMTLKIWSMKQDNCVHDLQA-HNKEIYTIKWSPTGPGTNNPNANLMLA 416
Query: 112 SGAGDAEVRLFNLSR 126
S + D+ VRL+++ R
Sbjct: 417 SASFDSTVRLWDVDR 431
Score = 62 (26.9 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 14/29 (48%), Positives = 16/29 (55%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLG 667
G Y+ASGS D IW QTG L+ G
Sbjct: 454 GRYLASGSFDKCVHIWNTQTGALVHSYRG 482
Score = 53 (23.7 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 15/55 (27%), Positives = 22/55 (40%)
Query: 642 IASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW 696
+AS S D +W+ G I L + V V P +A+ D + IW
Sbjct: 415 LASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIW 469
>MGI|MGI:2441730 [details] [associations]
symbol:Tbl1xr1 "transducin (beta)-like 1X-linked receptor 1"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003714 "transcription
corepressor activity" evidence=ISO;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IC]
[GO:0005876 "spindle microtubule" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=ISO] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0017053 "transcriptional
repressor complex" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IMP] [GO:0044212 "transcription
regulatory region DNA binding" evidence=ISO;IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;IMP] [GO:0047485
"protein N-terminus binding" evidence=ISO] [GO:0060070 "canonical
Wnt receptor signaling pathway" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 MGI:MGI:2441730 GO:GO:0017053
GO:GO:0003714 GO:GO:0045892 GO:GO:0005654 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 GO:GO:0016568 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070
GO:GO:0005876 GO:GO:0000118 GeneTree:ENSGT00690000102024 KO:K04508
CTD:79718 HOGENOM:HOG000220902 HOVERGEN:HBG050240 OMA:LANNHAD
OrthoDB:EOG412M5M ChiTaRS:TBL1XR1 EMBL:AF268195 EMBL:AK029595
EMBL:AK033347 EMBL:AK036064 EMBL:AK136255 EMBL:BC018512
IPI:IPI00308283 RefSeq:NP_109657.2 UniGene:Mm.202966
UniGene:Mm.446265 ProteinModelPortal:Q8BHJ5 SMR:Q8BHJ5
IntAct:Q8BHJ5 STRING:Q8BHJ5 PhosphoSite:Q8BHJ5 PaxDb:Q8BHJ5
PRIDE:Q8BHJ5 DNASU:81004 Ensembl:ENSMUST00000063988 GeneID:81004
KEGG:mmu:81004 InParanoid:Q8BHJ5 NextBio:350342 Bgee:Q8BHJ5
CleanEx:MM_TBL1XR1 Genevestigator:Q8BHJ5
GermOnline:ENSMUSG00000027630 Uniprot:Q8BHJ5
Length = 514
Score = 149 (57.5 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 39/135 (28%), Positives = 70/135 (51%)
Query: 2 ENFPFHDGSIYDMLDTRHTDTRPDVNHSLQMHSSLVRRLSQEREL---EGHQGCVNAISW 58
+ FPFH D+ D + +T + + +H V +L Q+R + +GH VNAI W
Sbjct: 302 QQFPFHSAPALDV-DWQSNNTFASCSTDMCIH---VCKLGQDRPIKTFQGHTNEVNAIKW 357
Query: 59 NSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPE---TSDE----LVV 111
+ G+LL S SDD + +WS +H ++ H+ ++ K+ P T++ ++
Sbjct: 358 DPTGNLLASCSDDMTLKIWSMKQDNCVHDLQA-HNKEIYTIKWSPTGPGTNNPNANLMLA 416
Query: 112 SGAGDAEVRLFNLSR 126
S + D+ VRL+++ R
Sbjct: 417 SASFDSTVRLWDVDR 431
Score = 62 (26.9 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 14/29 (48%), Positives = 16/29 (55%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLG 667
G Y+ASGS D IW QTG L+ G
Sbjct: 454 GRYLASGSFDKCVHIWNTQTGALVHSYRG 482
Score = 53 (23.7 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 15/55 (27%), Positives = 22/55 (40%)
Query: 642 IASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW 696
+AS S D +W+ G I L + V V P +A+ D + IW
Sbjct: 415 LASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIW 469
>RGD|1560053 [details] [associations]
symbol:Tbl1xr1 "transducin (beta)-like 1 X-linked receptor 1"
species:10116 "Rattus norvegicus" [GO:0000118 "histone deacetylase
complex" evidence=IEA;ISO] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003714 "transcription corepressor
activity" evidence=IEA;ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO] [GO:0005876
"spindle microtubule" evidence=IEA;ISO] [GO:0008013 "beta-catenin
binding" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0017053 "transcriptional repressor complex"
evidence=IEA;ISO] [GO:0042393 "histone binding" evidence=IEA;ISO]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA;ISO] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0047485
"protein N-terminus binding" evidence=IEA;ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 RGD:1560053 GO:GO:0017053 GO:GO:0003714
GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513
GO:GO:0060070 GO:GO:0005876 EMBL:CH473961 GO:GO:0000118
GeneTree:ENSGT00690000102024 KO:K04508 CTD:79718 OrthoDB:EOG412M5M
IPI:IPI00367976 RefSeq:NP_001102411.1 UniGene:Rn.140831
Ensembl:ENSRNOT00000015573 GeneID:365755 KEGG:rno:365755
UCSC:RGD:1560053 NextBio:687981 Uniprot:D3ZNF4
Length = 514
Score = 149 (57.5 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 39/135 (28%), Positives = 70/135 (51%)
Query: 2 ENFPFHDGSIYDMLDTRHTDTRPDVNHSLQMHSSLVRRLSQEREL---EGHQGCVNAISW 58
+ FPFH D+ D + +T + + +H V +L Q+R + +GH VNAI W
Sbjct: 302 QQFPFHSAPALDV-DWQSNNTFASCSTDMCIH---VCKLGQDRPIKTFQGHTNEVNAIKW 357
Query: 59 NSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPE---TSDE----LVV 111
+ G+LL S SDD + +WS +H ++ H+ ++ K+ P T++ ++
Sbjct: 358 DPTGNLLASCSDDMTLKIWSMKQDNCVHDLQA-HNKEIYTIKWSPTGPGTNNPNANLMLA 416
Query: 112 SGAGDAEVRLFNLSR 126
S + D+ VRL+++ R
Sbjct: 417 SASFDSTVRLWDVDR 431
Score = 62 (26.9 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 14/29 (48%), Positives = 16/29 (55%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLG 667
G Y+ASGS D IW QTG L+ G
Sbjct: 454 GRYLASGSFDKCVHIWNTQTGALVHSYRG 482
Score = 53 (23.7 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 15/55 (27%), Positives = 22/55 (40%)
Query: 642 IASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW 696
+AS S D +W+ G I L + V V P +A+ D + IW
Sbjct: 415 LASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIW 469
>ZFIN|ZDB-GENE-040426-1993 [details] [associations]
symbol:poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1993 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030030 HSSP:P16649
CTD:25886 HOVERGEN:HBG057502 KO:K16482 EMBL:BC045888
IPI:IPI00500664 RefSeq:NP_998214.1 UniGene:Dr.150982
ProteinModelPortal:Q7ZVF0 GeneID:406322 KEGG:dre:406322
NextBio:20817946 Uniprot:Q7ZVF0
Length = 416
Score = 125 (49.1 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 37/138 (26%), Positives = 62/138 (44%)
Query: 43 ERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFV 102
ER +GH+ + ++ ++ G + SGS D + VW+ + + TGH V C +F
Sbjct: 11 ERNFKGHRDAITSLDFSPSGKQIASGSVDASVMVWNMKPQSRAYRF-TGHKDAVTCVQFS 69
Query: 103 PETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHV 162
P S L+ S + D VRL+ + G + A T S C + + L + +
Sbjct: 70 P--SAHLLASSSRDKTVRLW-VPSVKGESVLFRAHTGSVRSVCFSADGQSLLTASDDQSI 126
Query: 163 -VWSASEDG---TLRQHD 176
+WS TLR+H+
Sbjct: 127 KLWSVHRQKIICTLREHN 144
Score = 84 (34.6 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 17/58 (29%), Positives = 28/58 (48%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW 696
G + S SDD +W+ + +LI + V HP +AT+ DNT+++W
Sbjct: 156 GQLMVSVSDDRTVKLWDASSRQLIHTFCEPGGYSSYVDFHPSSTCIATASSDNTVRVW 213
Score = 72 (30.4 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 17/54 (31%), Positives = 28/54 (51%)
Query: 642 IASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKI 695
IA+ S D +W+ +T L++ A VN + HP + T+ D+T+KI
Sbjct: 201 IATASSDNTVRVWDIRTHTLLQHYQVHSAAVNALSFHPSGNHLLTASSDSTLKI 254
Score = 65 (27.9 bits), Expect = 2.1e-06, Sum P(3) = 2.1e-06
Identities = 15/58 (25%), Positives = 27/58 (46%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW 696
G+++ + S D I + GRL+ L G + +CV A++G D + +W
Sbjct: 240 GNHLLTASSDSTLKILDLLEGRLLYTLHGHQGSASCVSFSRSGDQFASAGSDQQVMVW 297
Score = 38 (18.4 bits), Expect = 2.1e-06, Sum P(3) = 2.1e-06
Identities = 8/31 (25%), Positives = 17/31 (54%)
Query: 457 YKEALDFAIAAQCLDPSNSVMAEKVENIKKH 487
Y +DF ++ C+ ++S +V +I+ H
Sbjct: 188 YSSYVDFHPSSTCIATASSDNTVRVWDIRTH 218
>UNIPROTKB|E1BQV9 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00594543
ProteinModelPortal:E1BQV9 Ensembl:ENSGALT00000001552
ArrayExpress:E1BQV9 Uniprot:E1BQV9
Length = 660
Score = 125 (49.1 bits), Expect = 7.0e-05, Sum P(2) = 7.0e-05
Identities = 40/137 (29%), Positives = 69/137 (50%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L GH + ++ ++K L+++GS I VW + K+L ++ GH AN+ F P
Sbjct: 58 LTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTL-LGHKANICSLDFHPYG 116
Query: 106 SDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHVVW- 164
S V SG+ D +++L+++ R +G I Y+ HT+ V+ L +P W
Sbjct: 117 S--FVASGSLDTDIKLWDVRR---KG----CIFK---YKSHTQAVRCLRF---SPDGKWL 161
Query: 165 -SASEDGTLRQHDFRQG 180
SA++D T++ D G
Sbjct: 162 ASAADDHTVKLWDLTAG 178
Score = 113 (44.8 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 27/95 (28%), Positives = 54/95 (56%)
Query: 32 MHSSLVRRLSQE-RELEGHQGCVNA-ISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIE 89
M +++V + + + +E+ H V++ + S G LL +G DD +NVWS + +L H +
Sbjct: 1 MAAAVVTKTAWKLQEIVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVA--QLRHDLL 58
Query: 90 TGHSANVFCTKFVPETSDELVVSGAGDAEVRLFNL 124
TGH+ + + +EL+V+G+ +R+++L
Sbjct: 59 TGHTTPIESLQI--SAKEELIVAGSQSGSIRVWDL 91
Score = 102 (41.0 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 34/124 (27%), Positives = 60/124 (48%)
Query: 639 GDYIASGSDDGRWFIWE-KQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIWT 697
G ++ASGS D +W+ ++ G + K +AV C++ P +A++ D+T+K+W
Sbjct: 116 GSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAV-RCLRFSPDGKWLASAADDHTVKLWD 174
Query: 698 PSASVPSIVSGGAAGPDTADVLEAMESNQRKL-SRNREHSLSYELLERFHMHEFSEGSLR 756
+A G GP +V+E S + L S + ++ + LE+FH+ E
Sbjct: 175 LTAGKVMFEFTGHYGP--VNVVEFHPSIEYLLASGSSSMTIRFWDLEKFHVVSCIEEEAT 232
Query: 757 PFEC 760
P C
Sbjct: 233 PVRC 236
Score = 54 (24.1 bits), Expect = 7.0e-05, Sum P(2) = 7.0e-05
Identities = 13/67 (19%), Positives = 29/67 (43%)
Query: 642 IASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKI--WTPS 699
+ASGS W+ + ++ + + V C+ +P C + G +++++ W P
Sbjct: 204 LASGSSSMTIRFWDLEKFHVVSCIEEEATPVRCILFNPDGCCLY-GGFQDSLRVYGWEPE 262
Query: 700 ASVPSIV 706
+V
Sbjct: 263 RCFDVVV 269
>WB|WBGene00004767 [details] [associations]
symbol:sel-10 species:6239 "Caenorhabditis elegans"
[GO:0008593 "regulation of Notch signaling pathway" evidence=IGI]
[GO:0030424 "axon" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660
GO:GO:0045746 GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 128 (50.1 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 46/140 (32%), Positives = 67/140 (47%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L+GH V ++ GS+L++GS DT + VW S + L ++ GH A V C +F T
Sbjct: 334 LQGHTSTVRCMAM--AGSILVTGSRDTTLRVWDVESGRHLATLH-GHHAAVRCVQFDGTT 390
Query: 106 SDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHVVWS 165
VVSG D V+++N +GR + +T H RV L E +V S
Sbjct: 391 ----VVSGGYDFTVKIWNAH--TGRCI--RTLTG------HNNRVYSLLFE-SERSIVCS 435
Query: 166 ASEDGTLRQHDFR--QGSSC 183
S D ++R DF +G C
Sbjct: 436 GSLDTSIRVWDFTRPEGQEC 455
Score = 107 (42.7 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 28/87 (32%), Positives = 47/87 (54%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L GH G V + G ++SGS D + VWS LLH+++ GH++ V C
Sbjct: 292 LVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQ-GHTSTVRCMAM---- 346
Query: 106 SDELVVSGAGDAEVRLFNLSRFSGRGL 132
+ ++V+G+ D +R++++ SGR L
Sbjct: 347 AGSILVTGSRDTTLRVWDVE--SGRHL 371
Score = 92 (37.4 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 32/136 (23%), Positives = 63/136 (46%)
Query: 64 LLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPETSDELVVSGAGDAEVRLFN 123
+L++GSDD + VW ++++++ GH+ V+ ++ +VSG+ D V++++
Sbjct: 268 VLVTGSDDNTLKVWCIDKGEVMYTL-VGHTGGVWTSQI--SQCGRYIVSGSTDRTVKVWS 324
Query: 124 LSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHVVWSASEDGTLRQHDFRQGSSC 183
D ++ + Q HT V+ +A+ G+ ++ + S D TLR D G
Sbjct: 325 TV--------DGSLLHTL--QGHTSTVRCMAM-AGS--ILVTGSRDTTLRVWDVESGRHL 371
Query: 184 PPAGSSHQECRNILLD 199
H R + D
Sbjct: 372 ATLHGHHAAVRCVQFD 387
Score = 85 (35.0 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 24/80 (30%), Positives = 39/80 (48%)
Query: 638 RGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIWT 697
RG+ + S + D +W+ G + ML G + + +Q + +VATS D T+K+W
Sbjct: 472 RGNILVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQWFGRN-MVATSSDDGTVKLWD 530
Query: 698 --PSASVPSIV---SGGAAG 712
A + +V SGG G
Sbjct: 531 IERGALIRDLVTLDSGGNGG 550
Score = 74 (31.1 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 17/58 (29%), Positives = 26/58 (44%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW 696
G + SG D IW TGR I+ L G V + +V + +D +I++W
Sbjct: 388 GTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVW 445
>UNIPROTKB|Q93794 [details] [associations]
symbol:sel-10 "F-box/WD repeat-containing protein sel-10"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0030424 "axon" evidence=IDA] [GO:0046660 "female
sex differentiation" evidence=IMP] [GO:0045746 "negative regulation
of Notch signaling pathway" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660 GO:GO:0045746
GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 128 (50.1 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 46/140 (32%), Positives = 67/140 (47%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L+GH V ++ GS+L++GS DT + VW S + L ++ GH A V C +F T
Sbjct: 334 LQGHTSTVRCMAM--AGSILVTGSRDTTLRVWDVESGRHLATLH-GHHAAVRCVQFDGTT 390
Query: 106 SDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHVVWS 165
VVSG D V+++N +GR + +T H RV L E +V S
Sbjct: 391 ----VVSGGYDFTVKIWNAH--TGRCI--RTLTG------HNNRVYSLLFE-SERSIVCS 435
Query: 166 ASEDGTLRQHDFR--QGSSC 183
S D ++R DF +G C
Sbjct: 436 GSLDTSIRVWDFTRPEGQEC 455
Score = 107 (42.7 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 28/87 (32%), Positives = 47/87 (54%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L GH G V + G ++SGS D + VWS LLH+++ GH++ V C
Sbjct: 292 LVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQ-GHTSTVRCMAM---- 346
Query: 106 SDELVVSGAGDAEVRLFNLSRFSGRGL 132
+ ++V+G+ D +R++++ SGR L
Sbjct: 347 AGSILVTGSRDTTLRVWDVE--SGRHL 371
Score = 92 (37.4 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 32/136 (23%), Positives = 63/136 (46%)
Query: 64 LLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPETSDELVVSGAGDAEVRLFN 123
+L++GSDD + VW ++++++ GH+ V+ ++ +VSG+ D V++++
Sbjct: 268 VLVTGSDDNTLKVWCIDKGEVMYTL-VGHTGGVWTSQI--SQCGRYIVSGSTDRTVKVWS 324
Query: 124 LSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHVVWSASEDGTLRQHDFRQGSSC 183
D ++ + Q HT V+ +A+ G+ ++ + S D TLR D G
Sbjct: 325 TV--------DGSLLHTL--QGHTSTVRCMAM-AGS--ILVTGSRDTTLRVWDVESGRHL 371
Query: 184 PPAGSSHQECRNILLD 199
H R + D
Sbjct: 372 ATLHGHHAAVRCVQFD 387
Score = 85 (35.0 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 24/80 (30%), Positives = 39/80 (48%)
Query: 638 RGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIWT 697
RG+ + S + D +W+ G + ML G + + +Q + +VATS D T+K+W
Sbjct: 472 RGNILVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQWFGRN-MVATSSDDGTVKLWD 530
Query: 698 --PSASVPSIV---SGGAAG 712
A + +V SGG G
Sbjct: 531 IERGALIRDLVTLDSGGNGG 550
Score = 74 (31.1 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 17/58 (29%), Positives = 26/58 (44%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW 696
G + SG D IW TGR I+ L G V + +V + +D +I++W
Sbjct: 388 GTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVW 445
>UNIPROTKB|Q8NBT0 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0005932 "microtubule basal body" evidence=IDA] [GO:0005814
"centriole" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005932 GO:GO:0030030 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK075289 EMBL:BC007417
EMBL:BC110877 EMBL:BC119692 EMBL:AL117629 IPI:IPI00171440
IPI:IPI00719213 PIR:T17331 RefSeq:NP_001155052.1
RefSeq:NP_001155053.1 RefSeq:NP_056241.3 UniGene:Hs.476306
ProteinModelPortal:Q8NBT0 SMR:Q8NBT0 IntAct:Q8NBT0 DMDM:91207986
PRIDE:Q8NBT0 Ensembl:ENST00000296484 Ensembl:ENST00000394970
GeneID:25886 KEGG:hsa:25886 UCSC:uc003dcu.3 UCSC:uc003dcw.3
GeneCards:GC03M052109 HGNC:HGNC:24488 HPA:HPA040600 MIM:614783
MIM:614813 neXtProt:NX_Q8NBT0 PharmGKB:PA165698089
InParanoid:Q8NBT0 PhylomeDB:Q8NBT0 GenomeRNAi:25886 NextBio:47308
ArrayExpress:Q8NBT0 Bgee:Q8NBT0 CleanEx:HS_WDR51A
Genevestigator:Q8NBT0 GermOnline:ENSG00000164087 Uniprot:Q8NBT0
Length = 407
Score = 112 (44.5 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 37/133 (27%), Positives = 60/133 (45%)
Query: 41 SQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTK 100
S ER +GH+ V + ++ L SGS D+ + VW + + TGH V C
Sbjct: 10 SLERHFKGHRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQSRAYRF-TGHKDAVTCVN 68
Query: 101 FVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNP 160
F P S L+ SG+ D VR++ + G S +++ HT V+ +
Sbjct: 69 FSP--SGHLLASGSRDKTVRIW-VPNVKGE---------STVFRAHTATVRSVHFCSDGQ 116
Query: 161 HVVWSASEDGTLR 173
V +AS+D T++
Sbjct: 117 SFV-TASDDKTVK 128
Score = 97 (39.2 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 19/58 (32%), Positives = 28/58 (48%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW 696
G I S SDD +W+K + + V V HP +A +G+DNT+K+W
Sbjct: 157 GRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVW 214
Score = 87 (35.7 bits), Expect = 8.0e-06, Sum P(2) = 8.0e-06
Identities = 27/93 (29%), Positives = 45/93 (48%)
Query: 41 SQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANV---- 96
S+ GH+ V ++++ G LL SGS D + +W + K ++ H+A V
Sbjct: 52 SRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVH 110
Query: 97 FCT---KFVPETSDELVVSGAGDAEVRLFNLSR 126
FC+ FV + D+ V A + LF+LS+
Sbjct: 111 FCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQ 143
Score = 76 (31.8 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 21/74 (28%), Positives = 34/74 (45%)
Query: 622 HCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFD 681
+C G + F G IA+ D +W+ +T RL++ A VN + HP
Sbjct: 183 YCEHGGFVTYVDF-HPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSG 241
Query: 682 CVVATSGIDNTIKI 695
+ T+ D+T+KI
Sbjct: 242 NYLITASSDSTLKI 255
Score = 61 (26.5 bits), Expect = 8.6e-05, Sum P(2) = 8.6e-05
Identities = 14/62 (22%), Positives = 26/62 (41%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIWTP 698
G + SDD +W + + L V C + P ++ ++ D T+K+W
Sbjct: 115 GQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDK 174
Query: 699 SA 700
S+
Sbjct: 175 SS 176
Score = 59 (25.8 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 15/58 (25%), Positives = 24/58 (41%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW 696
G+Y+ + S D I + GRL+ L G + V A+ G D + +W
Sbjct: 241 GNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 126 (49.4 bits), Expect = 1.8e-08, Sum P(3) = 1.8e-08
Identities = 46/179 (25%), Positives = 85/179 (47%)
Query: 22 TRPDVNHSLQMHSSL--VRRL--SQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVW 77
TR N++L S L V + ++++ LE H G V ++ ++ G L+SGS D + +W
Sbjct: 718 TRRIFNYNLSGWSQLPKVEQTWSAEQQTLENHLGPVESVVFSPDGKQLVSGSYDDTVKIW 777
Query: 78 SYSSRKLLHSIETGHSANVFCTKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAI 137
++ +LL +++ GHS V F P+ +L+ SG+ D + L++ + +G L
Sbjct: 778 DPATGELLQTLD-GHSGTVESLAFSPD--GKLLASGSYDNTIDLWDSA--TGELLQT--- 829
Query: 138 TPSALYQCHTRRVKKLAVEVGNPHVVWSASEDGTLRQHDFRQGSSCPPAGSSHQECRNI 196
++ H + +A + SAS+D T++ D G S Q R++
Sbjct: 830 -----FEGHPHSIWSVAFAPDGKELA-SASDDSTIKIWDLATGELQQTLDSHSQSVRSV 882
Score = 123 (48.4 bits), Expect = 2.9e-07, Sum P(3) = 2.9e-07
Identities = 35/134 (26%), Positives = 69/134 (51%)
Query: 43 ERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFV 102
++ LEG G V +++++ G L SGS+ + +W+ ++ +LL ++E GHS +V F
Sbjct: 911 QQSLEGRSGWVKSVAFSPDGKKLASGSEKNTVKLWNPATGELLQTLE-GHSQSVRSVAFS 969
Query: 103 PETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHV 162
P+ + S + D ++L+N + +G L ++ H ++ +A H+
Sbjct: 970 PDGKQ--LASSSSDTTIKLWNST--TGE-LQQT-------FKGHDLWIRAVAFSPDGKHL 1017
Query: 163 VWSASEDGTLRQHD 176
V S S+D T++ D
Sbjct: 1018 V-SGSDDNTIKLWD 1030
Score = 117 (46.2 bits), Expect = 1.2e-06, Sum P(3) = 1.2e-06
Identities = 27/95 (28%), Positives = 54/95 (56%)
Query: 29 SLQMHSSLVRRLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSI 88
++++ +S L Q +GH + A++++ G L+SGSDD I +W ++ +L S+
Sbjct: 983 TIKLWNSTTGELQQT--FKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLATSELQQSL 1040
Query: 89 ETGHSANVFCTKFVPETSDELVVSGAGDAEVRLFN 123
E HS +V F P+ D+ + S + D+ ++L++
Sbjct: 1041 ED-HSRSVHAVAFSPD--DKQLASSSLDSTIKLWD 1072
Score = 108 (43.1 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 36/136 (26%), Positives = 66/136 (48%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
LEGH V +++++ G L S S DT I +W+ ++ +L + + GH + F P+
Sbjct: 956 LEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNSTTGELQQTFK-GHDLWIRAVAFSPDG 1014
Query: 106 SDELVVSGAGDAEVRLFNLSRFS-GRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHVVW 164
+VSG+ D ++L++L+ + L+D H+R V +A + +
Sbjct: 1015 KH--LVSGSDDNTIKLWDLATSELQQSLED-----------HSRSVHAVAFSPDDKQLA- 1060
Query: 165 SASEDGTLRQHDFRQG 180
S+S D T++ D G
Sbjct: 1061 SSSLDSTIKLWDSATG 1076
Score = 105 (42.0 bits), Expect = 1.8e-08, Sum P(3) = 1.8e-08
Identities = 29/103 (28%), Positives = 51/103 (49%)
Query: 611 TVIDMKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEA 670
T +++Q + GH I+ +F G ++ SGSDD +W+ T L + L
Sbjct: 990 TTGELQQTFKGH---DLWIRAVAF-SPDGKHLVSGSDDNTIKLWDLATSELQQSLEDHSR 1045
Query: 671 VVNCVQCHPFDCVVATSGIDNTIKIW-TPSASVPSIVSGGAAG 712
V+ V P D +A+S +D+TIK+W + + + + G + G
Sbjct: 1046 SVHAVAFSPDDKQLASSSLDSTIKLWDSATGELQRTLEGHSQG 1088
Score = 96 (38.9 bits), Expect = 1.4e-07, Sum P(3) = 1.4e-07
Identities = 26/85 (30%), Positives = 40/85 (47%)
Query: 614 DMKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVN 673
++ Q GH +D Q+ G +ASGS D +W+ TG L+++ G V
Sbjct: 1161 ELLQTLEGH----SDRIQSVVFSPDGKLLASGSYDQTAKLWDPATGELLQIFEGHSKWVE 1216
Query: 674 CVQCHPFDCVVATSGIDNTIKIWTP 698
V P ++A+S TIK+W P
Sbjct: 1217 SVAFSPDGKLLASSSYGETIKLWDP 1241
Score = 94 (38.1 bits), Expect = 3.4e-05, Sum P(3) = 3.4e-05
Identities = 25/81 (30%), Positives = 45/81 (55%)
Query: 43 ERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFV 102
++ L+ H V +++++ G LL S S D+ I VW+ ++ +L S+E G S V F
Sbjct: 869 QQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATGELQQSLE-GRSGWVKSVAFS 927
Query: 103 PETSDELVVSGAGDAEVRLFN 123
P+ + + SG+ V+L+N
Sbjct: 928 PD--GKKLASGSEKNTVKLWN 946
Score = 93 (37.8 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 23/68 (33%), Positives = 33/68 (48%)
Query: 629 IKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSG 688
+K +F G +ASGS+ +W TG L++ L G V V P +A+S
Sbjct: 921 VKSVAF-SPDGKKLASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSPDGKQLASSS 979
Query: 689 IDNTIKIW 696
D TIK+W
Sbjct: 980 SDTTIKLW 987
Score = 92 (37.4 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 25/81 (30%), Positives = 44/81 (54%)
Query: 43 ERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFV 102
+R LEGH V +++++ G LL S S D I +W+ + +L ++ TG S V F
Sbjct: 1079 QRTLEGHSQGVRSVTFSPDGKLLASNSYDGTIKLWNPLTGELQQTL-TGRSDWVDSVAFS 1137
Query: 103 PETSDELVVSGAGDAEVRLFN 123
P+ + SG D+ ++L++
Sbjct: 1138 PDGKQ--LASGYYDSTIKLWD 1156
Score = 88 (36.0 bits), Expect = 9.0e-07, Sum P(3) = 9.0e-07
Identities = 20/57 (35%), Positives = 29/57 (50%)
Query: 642 IASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIWTP 698
+AS S D +W+ TG L + L G V V P ++A++ D TIK+W P
Sbjct: 1059 LASSSLDSTIKLWDSATGELQRTLEGHSQGVRSVTFSPDGKLLASNSYDGTIKLWNP 1115
Score = 88 (36.0 bits), Expect = 9.0e-07, Sum P(3) = 9.0e-07
Identities = 19/61 (31%), Positives = 30/61 (49%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIWTP 698
G +ASG D +W+ TG L++ L G + V P ++A+ D T K+W P
Sbjct: 1140 GKQLASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVFSPDGKLLASGSYDQTAKLWDP 1199
Query: 699 S 699
+
Sbjct: 1200 A 1200
Score = 83 (34.3 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 25/95 (26%), Positives = 40/95 (42%)
Query: 607 YQPETVIDMKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLL 666
+ P T ++ Q GH ++ +F G +AS S D +W TG L +
Sbjct: 945 WNPATG-ELLQTLEGHSQ---SVRSVAF-SPDGKQLASSSSDTTIKLWNSTTGELQQTFK 999
Query: 667 GDEAVVNCVQCHPFDCVVATSGIDNTIKIWTPSAS 701
G + + V P + + DNTIK+W + S
Sbjct: 1000 GHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLATS 1034
Score = 83 (34.3 bits), Expect = 2.8e-06, Sum P(3) = 2.8e-06
Identities = 25/83 (30%), Positives = 40/83 (48%)
Query: 614 DMKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVN 673
++++ GH G ++ +F G +AS S DG +W TG L + L G V+
Sbjct: 1077 ELQRTLEGHSQ-G--VRSVTF-SPDGKLLASNSYDGTIKLWNPLTGELQQTLTGRSDWVD 1132
Query: 674 CVQCHPFDCVVATSGIDNTIKIW 696
V P +A+ D+TIK+W
Sbjct: 1133 SVAFSPDGKQLASGYYDSTIKLW 1155
Score = 82 (33.9 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 20/61 (32%), Positives = 28/61 (45%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIWTP 698
G +AS S D +W TG L + L G V V P +A+ NT+K+W P
Sbjct: 888 GKLLASSSLDSTIKVWNPATGELQQSLEGRSGWVKSVAFSPDGKKLASGSEKNTVKLWNP 947
Query: 699 S 699
+
Sbjct: 948 A 948
Score = 58 (25.5 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 24/93 (25%), Positives = 41/93 (44%)
Query: 607 YQPETVIDMKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLL 666
+ P T ++ Q + GH ++ +F G +AS S +W+ TG L++ L
Sbjct: 1197 WDPATG-ELLQIFEGHSKW---VESVAF-SPDGKLLASSSYGETIKLWDPVTGELLQTLN 1251
Query: 667 GDEAVVNCVQCHPFDCVVATSGIDNTIKIWTPS 699
+ V P +A+ I +T KIW P+
Sbjct: 1252 DPDESAGSVAFSPDGNRLASVDIFDT-KIWDPA 1283
Score = 56 (24.8 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 18/58 (31%), Positives = 29/58 (50%)
Query: 276 GRSSLHLTHVTFSPNGEEVLLSYSGEHVYLMDVNHAGGRAMRYTVGDASKIMS--FTP 331
GRS + V FSP+G+++ Y + L D A G ++ G + +I S F+P
Sbjct: 1126 GRSDW-VDSVAFSPDGKQLASGYYDSTIKLWD--SATGELLQTLEGHSDRIQSVVFSP 1180
Score = 40 (19.1 bits), Expect = 0.00066, Sum P(3) = 0.00066
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 653 IWEKQTGRLIKMLLG 667
IW+ TG L++ L G
Sbjct: 1279 IWDPATGELLQALKG 1293
Score = 37 (18.1 bits), Expect = 1.8e-08, Sum P(3) = 1.8e-08
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 272 LSEHGRSSLHLTHVTFSPNGEEVLLSYSGEHVYL 305
L H +S + V FSP+G+++ S S + L
Sbjct: 956 LEGHSQS---VRSVAFSPDGKQLASSSSDTTIKL 986
Score = 37 (18.1 bits), Expect = 1.4e-07, Sum P(3) = 1.4e-07
Identities = 9/17 (52%), Positives = 12/17 (70%)
Query: 285 VTFSPNGEEVLL-SYSG 300
VTFSP+G+ + SY G
Sbjct: 1092 VTFSPDGKLLASNSYDG 1108
>UNIPROTKB|H3BPK1 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0010976 "positive
regulation of neuron projection development" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth cone"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005813 GO:GO:0010976 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0051013 EMBL:AC018552
EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845 HGNC:HGNC:6217
Ensembl:ENST00000562592 Bgee:H3BPK1 Uniprot:H3BPK1
Length = 210
Score = 124 (48.7 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 39/137 (28%), Positives = 66/137 (48%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L GH V ++ N+ L+++GS I VW + K+L ++ GH AN+ F P
Sbjct: 59 LTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTL-MGHKANICSLDFHPY- 116
Query: 106 SDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHVVW- 164
E V SG+ D ++L+++ R +G Y+ H++ V+ L +P W
Sbjct: 117 -GEFVASGSQDTNIKLWDIRR---KGCVFR-------YRGHSQAVRCLRF---SPDGKWL 162
Query: 165 -SASEDGTLRQHDFRQG 180
SA++D T++ D G
Sbjct: 163 ASAADDHTVKLWDLTAG 179
Score = 109 (43.4 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 24/82 (29%), Positives = 47/82 (57%)
Query: 44 RELEGHQGCVNA-ISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFV 102
+E+ H V++ + + G LL +G DD +N+WS + + S+ TGH++ V +
Sbjct: 14 QEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSL-TGHTSPVESVRL- 71
Query: 103 PETSDELVVSGAGDAEVRLFNL 124
T +EL+V+G+ +R+++L
Sbjct: 72 -NTPEELIVAGSQSGSIRVWDL 92
Score = 88 (36.0 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 20/75 (26%), Positives = 36/75 (48%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIWTP 698
G+++ASGS D +W+ + + G V C++ P +A++ D+T+K+W
Sbjct: 117 GEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDL 176
Query: 699 SASVPSIVSGGAAGP 713
+A G GP
Sbjct: 177 TAGKMMSEFPGHTGP 191
Score = 80 (33.2 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 20/73 (27%), Positives = 35/73 (47%)
Query: 618 RYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQC 677
RY GH ++ F G ++AS +DD +W+ G+++ G VN V+
Sbjct: 142 RYRGHSQA---VRCLRF-SPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEF 197
Query: 678 HPFDCVVATSGID 690
HP + ++A+ D
Sbjct: 198 HPNEYLLASGSSD 210
>UNIPROTKB|E2QTQ5 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 RefSeq:XP_850865.1
ProteinModelPortal:E2QTQ5 Ensembl:ENSCAFT00000013754 GeneID:612852
KEGG:cfa:612852 NextBio:20898345 Uniprot:E2QTQ5
Length = 655
Score = 124 (48.7 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 39/137 (28%), Positives = 66/137 (48%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L GH V ++ N+ L+++GS I VW + K+L ++ GH AN+ F P
Sbjct: 59 LTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTL-MGHKANICSLDFHPY- 116
Query: 106 SDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHVVW- 164
E V SG+ D ++L+++ R +G Y+ H++ V+ L +P W
Sbjct: 117 -GEFVASGSQDTNIKLWDIRR---KGCVFR-------YRGHSQAVRCLRF---SPDGKWL 162
Query: 165 -SASEDGTLRQHDFRQG 180
SA++D T++ D G
Sbjct: 163 ASAADDHTVKLWDLTAG 179
Score = 109 (43.4 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 24/82 (29%), Positives = 47/82 (57%)
Query: 44 RELEGHQGCVNA-ISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFV 102
+E+ H V++ + + G LL +G DD +N+WS + + S+ TGH++ V +
Sbjct: 14 QEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSL-TGHTSPVESVRL- 71
Query: 103 PETSDELVVSGAGDAEVRLFNL 124
T +EL+V+G+ +R+++L
Sbjct: 72 -NTPEELIVAGSQSGSIRVWDL 92
Score = 105 (42.0 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 28/97 (28%), Positives = 45/97 (46%)
Query: 618 RYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQC 677
RY GH ++ F G ++AS +DD +W+ G+++ G VN V+
Sbjct: 142 RYRGHSQA---VRCLRF-SPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEF 197
Query: 678 HPFDCVVATSGIDNTIKIWT-PSASVPSIVSGGAAGP 713
HP + ++A+ D TI+ W V S + G GP
Sbjct: 198 HPNEYLLASGSSDRTIRFWDLEKFQVVSCIEG-EPGP 233
Score = 104 (41.7 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 29/119 (24%), Positives = 55/119 (46%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIWTP 698
G+++ASGS D +W+ + + G V C++ P +A++ D+T+K+W
Sbjct: 117 GEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDL 176
Query: 699 SASVPSIVSGGAAGPDTADVLEAMESNQRKLSRNREHSLSYELLERFHMHEFSEGSLRP 757
+A G GP +V+E + S + + ++ + LE+F + EG P
Sbjct: 177 TAGKMMSEFPGHTGP--VNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGP 233
Score = 63 (27.2 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 15/59 (25%), Positives = 30/59 (50%)
Query: 642 IASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKI--WTP 698
+ASGS D W+ + +++ + G+ V V +P C + SG +++++ W P
Sbjct: 204 LASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLY-SGCQDSLRVYGWEP 261
Score = 40 (19.1 bits), Expect = 0.00066, Sum P(3) = 0.00066
Identities = 13/52 (25%), Positives = 22/52 (42%)
Query: 281 HLTHVTFSPNGEEVLLSYSGEHVYLMDVNHAGGRAMRYTV-GDASKIMSFTP 331
++ + F P GE V ++ L D+ G RY A + + F+P
Sbjct: 107 NICSLDFHPYGEFVASGSQDTNIKLWDIRRKGC-VFRYRGHSQAVRCLRFSP 157
>UNIPROTKB|Q9BVA0 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0005874 "microtubule"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0010942 "positive regulation of cell death" evidence=IEA]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth
cone" evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IDA] [GO:0000922 "spindle pole" evidence=IDA]
[GO:0006605 "protein targeting" evidence=NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IMP]
[GO:0008352 "katanin complex" evidence=IDA;TAS] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 GO:GO:0006605 GO:GO:0010976
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0008017 EMBL:CH471092
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 GO:GO:0007026
EMBL:AC092118 HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022
PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV
EMBL:AF052432 EMBL:BT007022 EMBL:CR456762 EMBL:BC001353
IPI:IPI00746256 RefSeq:NP_005877.2 UniGene:Hs.275675
UniGene:Hs.732486 ProteinModelPortal:Q9BVA0 SMR:Q9BVA0
STRING:Q9BVA0 PhosphoSite:Q9BVA0 DMDM:60390213 PaxDb:Q9BVA0
PRIDE:Q9BVA0 DNASU:10300 Ensembl:ENST00000379661 GeneID:10300
KEGG:hsa:10300 UCSC:uc002eml.1 GeneCards:GC16P057770 HGNC:HGNC:6217
HPA:HPA041165 HPA:HPA041839 MIM:602703 neXtProt:NX_Q9BVA0
PharmGKB:PA30018 InParanoid:Q9BVA0 OMA:NAISRTP PhylomeDB:Q9BVA0
GenomeRNAi:10300 NextBio:39044 Bgee:Q9BVA0 CleanEx:HS_KATNB1
Genevestigator:Q9BVA0 GermOnline:ENSG00000140854 GO:GO:0031117
Uniprot:Q9BVA0
Length = 655
Score = 124 (48.7 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 39/137 (28%), Positives = 66/137 (48%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L GH V ++ N+ L+++GS I VW + K+L ++ GH AN+ F P
Sbjct: 59 LTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTL-MGHKANICSLDFHPY- 116
Query: 106 SDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHVVW- 164
E V SG+ D ++L+++ R +G Y+ H++ V+ L +P W
Sbjct: 117 -GEFVASGSQDTNIKLWDIRR---KGCVFR-------YRGHSQAVRCLRF---SPDGKWL 162
Query: 165 -SASEDGTLRQHDFRQG 180
SA++D T++ D G
Sbjct: 163 ASAADDHTVKLWDLTAG 179
Score = 109 (43.4 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 24/82 (29%), Positives = 47/82 (57%)
Query: 44 RELEGHQGCVNA-ISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFV 102
+E+ H V++ + + G LL +G DD +N+WS + + S+ TGH++ V +
Sbjct: 14 QEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSL-TGHTSPVESVRL- 71
Query: 103 PETSDELVVSGAGDAEVRLFNL 124
T +EL+V+G+ +R+++L
Sbjct: 72 -NTPEELIVAGSQSGSIRVWDL 92
Score = 105 (42.0 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 28/97 (28%), Positives = 45/97 (46%)
Query: 618 RYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQC 677
RY GH ++ F G ++AS +DD +W+ G+++ G VN V+
Sbjct: 142 RYRGHSQA---VRCLRF-SPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEF 197
Query: 678 HPFDCVVATSGIDNTIKIWT-PSASVPSIVSGGAAGP 713
HP + ++A+ D TI+ W V S + G GP
Sbjct: 198 HPNEYLLASGSSDRTIRFWDLEKFQVVSCIEG-EPGP 233
Score = 104 (41.7 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 29/119 (24%), Positives = 55/119 (46%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIWTP 698
G+++ASGS D +W+ + + G V C++ P +A++ D+T+K+W
Sbjct: 117 GEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDL 176
Query: 699 SASVPSIVSGGAAGPDTADVLEAMESNQRKLSRNREHSLSYELLERFHMHEFSEGSLRP 757
+A G GP +V+E + S + + ++ + LE+F + EG P
Sbjct: 177 TAGKMMSEFPGHTGP--VNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGP 233
Score = 63 (27.2 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 15/59 (25%), Positives = 30/59 (50%)
Query: 642 IASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKI--WTP 698
+ASGS D W+ + +++ + G+ V V +P C + SG +++++ W P
Sbjct: 204 LASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLY-SGCQDSLRVYGWEP 261
Score = 40 (19.1 bits), Expect = 0.00066, Sum P(3) = 0.00066
Identities = 13/52 (25%), Positives = 22/52 (42%)
Query: 281 HLTHVTFSPNGEEVLLSYSGEHVYLMDVNHAGGRAMRYTV-GDASKIMSFTP 331
++ + F P GE V ++ L D+ G RY A + + F+P
Sbjct: 107 NICSLDFHPYGEFVASGSQDTNIKLWDIRRKGC-VFRYRGHSQAVRCLRFSP 157
>RGD|1311256 [details] [associations]
symbol:Katnb1 "katanin p80 (WD repeat containing) subunit B 1"
species:10116 "Rattus norvegicus" [GO:0000922 "spindle pole"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA;ISO] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA;ISO]
[GO:0010942 "positive regulation of cell death" evidence=IMP]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030496 "midbody" evidence=IDA] [GO:0031117
"positive regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0045502 "dynein binding" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0051013
"microtubule severing" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311256 GO:GO:0005886 GO:GO:0005813 GO:GO:0010976
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030426 GO:GO:0010942 GO:GO:0030496
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 HOGENOM:HOG000008039
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
OMA:NAISRTP GO:GO:0031117 EMBL:CH474006 EMBL:AY953248
IPI:IPI00363482 RefSeq:NP_001019917.1 UniGene:Rn.22157
STRING:Q4VFZ4 Ensembl:ENSRNOT00000019770 GeneID:291852
KEGG:rno:291852 UCSC:RGD:1311256 InParanoid:Q4VFZ4 NextBio:633288
Genevestigator:Q4VFZ4 Uniprot:Q4VFZ4
Length = 655
Score = 124 (48.7 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 39/137 (28%), Positives = 66/137 (48%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L GH V ++ N+ L+++GS I VW + K+L ++ GH AN+ F P
Sbjct: 59 LTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTL-MGHKANICSLDFHPY- 116
Query: 106 SDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHVVW- 164
E V SG+ D ++L+++ R +G Y+ H++ V+ L +P W
Sbjct: 117 -GEFVASGSQDTNIKLWDIRR---KGCVFR-------YRGHSQAVRCLRF---SPDGKWL 162
Query: 165 -SASEDGTLRQHDFRQG 180
SA++D T++ D G
Sbjct: 163 ASAADDHTVKLWDLTAG 179
Score = 109 (43.4 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 24/82 (29%), Positives = 47/82 (57%)
Query: 44 RELEGHQGCVNA-ISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFV 102
+E+ H V++ + + G LL +G DD +N+WS + + S+ TGH++ V +
Sbjct: 14 QEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSL-TGHTSPVESVRL- 71
Query: 103 PETSDELVVSGAGDAEVRLFNL 124
T +EL+V+G+ +R+++L
Sbjct: 72 -NTPEELIVAGSQSGSIRVWDL 92
Score = 105 (42.0 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 28/97 (28%), Positives = 45/97 (46%)
Query: 618 RYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQC 677
RY GH ++ F G ++AS +DD +W+ G+++ G VN V+
Sbjct: 142 RYRGHSQA---VRCLRF-SPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEF 197
Query: 678 HPFDCVVATSGIDNTIKIWT-PSASVPSIVSGGAAGP 713
HP + ++A+ D TI+ W V S + G GP
Sbjct: 198 HPNEYLLASGSSDRTIRFWDLEKFQVVSCIEG-EPGP 233
Score = 104 (41.7 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 29/119 (24%), Positives = 55/119 (46%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIWTP 698
G+++ASGS D +W+ + + G V C++ P +A++ D+T+K+W
Sbjct: 117 GEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDL 176
Query: 699 SASVPSIVSGGAAGPDTADVLEAMESNQRKLSRNREHSLSYELLERFHMHEFSEGSLRP 757
+A G GP +V+E + S + + ++ + LE+F + EG P
Sbjct: 177 TAGKMMSEFPGHTGP--VNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGP 233
Score = 63 (27.2 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 15/59 (25%), Positives = 30/59 (50%)
Query: 642 IASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKI--WTP 698
+ASGS D W+ + +++ + G+ V V +P C + SG +++++ W P
Sbjct: 204 LASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLY-SGCQDSLRVYGWEP 261
Score = 40 (19.1 bits), Expect = 0.00066, Sum P(3) = 0.00066
Identities = 13/52 (25%), Positives = 22/52 (42%)
Query: 281 HLTHVTFSPNGEEVLLSYSGEHVYLMDVNHAGGRAMRYTV-GDASKIMSFTP 331
++ + F P GE V ++ L D+ G RY A + + F+P
Sbjct: 107 NICSLDFHPYGEFVASGSQDTNIKLWDIRRKGC-VFRYRGHSQAVRCLRFSP 157
>MGI|MGI:1921437 [details] [associations]
symbol:Katnb1 "katanin p80 (WD40-containing) subunit B 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813
"centrosome" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=ISO] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0010976 "positive
regulation of neuron projection development" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030496 "midbody" evidence=ISO] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0045502 "dynein
binding" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051013 "microtubule severing"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1921437 GO:GO:0005886 GO:GO:0005813
GO:GO:0010976 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030426 GO:GO:0010942 GO:GO:0030496 GO:GO:0008568
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0045502
HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845
CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP
GO:GO:0031117 EMBL:AK010364 EMBL:AK031630 EMBL:AK034103
EMBL:AK049345 EMBL:AK087973 EMBL:BC024500 EMBL:BC045200
IPI:IPI00221459 RefSeq:NP_083081.2 UniGene:Mm.28382
ProteinModelPortal:Q8BG40 SMR:Q8BG40 STRING:Q8BG40
PhosphoSite:Q8BG40 PaxDb:Q8BG40 PRIDE:Q8BG40
Ensembl:ENSMUST00000034239 GeneID:74187 KEGG:mmu:74187
UCSC:uc009mxt.1 InParanoid:Q8BG40 NextBio:340036 Bgee:Q8BG40
CleanEx:MM_KATNB1 Genevestigator:Q8BG40
GermOnline:ENSMUSG00000031787 Uniprot:Q8BG40
Length = 658
Score = 124 (48.7 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 39/137 (28%), Positives = 66/137 (48%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L GH V ++ N+ L+++GS I VW + K+L ++ GH AN+ F P
Sbjct: 59 LTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTL-MGHKANICSLDFHPY- 116
Query: 106 SDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHVVW- 164
E V SG+ D ++L+++ R +G Y+ H++ V+ L +P W
Sbjct: 117 -GEFVASGSQDTNIKLWDIRR---KGCVFR-------YRGHSQAVRCLRF---SPDGKWL 162
Query: 165 -SASEDGTLRQHDFRQG 180
SA++D T++ D G
Sbjct: 163 ASAADDHTVKLWDLTAG 179
Score = 109 (43.4 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 24/82 (29%), Positives = 47/82 (57%)
Query: 44 RELEGHQGCVNA-ISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFV 102
+E+ H V++ + + G LL +G DD +N+WS + + S+ TGH++ V +
Sbjct: 14 QEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSL-TGHTSPVESVRL- 71
Query: 103 PETSDELVVSGAGDAEVRLFNL 124
T +EL+V+G+ +R+++L
Sbjct: 72 -NTPEELIVAGSQSGSIRVWDL 92
Score = 105 (42.0 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 28/97 (28%), Positives = 45/97 (46%)
Query: 618 RYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQC 677
RY GH ++ F G ++AS +DD +W+ G+++ G VN V+
Sbjct: 142 RYRGHSQA---VRCLRF-SPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEF 197
Query: 678 HPFDCVVATSGIDNTIKIWT-PSASVPSIVSGGAAGP 713
HP + ++A+ D TI+ W V S + G GP
Sbjct: 198 HPNEYLLASGSSDRTIRFWDLEKFQVVSCIEG-EPGP 233
Score = 104 (41.7 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 29/119 (24%), Positives = 55/119 (46%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIWTP 698
G+++ASGS D +W+ + + G V C++ P +A++ D+T+K+W
Sbjct: 117 GEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDL 176
Query: 699 SASVPSIVSGGAAGPDTADVLEAMESNQRKLSRNREHSLSYELLERFHMHEFSEGSLRP 757
+A G GP +V+E + S + + ++ + LE+F + EG P
Sbjct: 177 TAGKMMSEFPGHTGP--VNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGP 233
Score = 63 (27.2 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 15/59 (25%), Positives = 30/59 (50%)
Query: 642 IASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKI--WTP 698
+ASGS D W+ + +++ + G+ V V +P C + SG +++++ W P
Sbjct: 204 LASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLY-SGCQDSLRVYGWEP 261
Score = 40 (19.1 bits), Expect = 0.00067, Sum P(3) = 0.00067
Identities = 13/52 (25%), Positives = 22/52 (42%)
Query: 281 HLTHVTFSPNGEEVLLSYSGEHVYLMDVNHAGGRAMRYTV-GDASKIMSFTP 331
++ + F P GE V ++ L D+ G RY A + + F+P
Sbjct: 107 NICSLDFHPYGEFVASGSQDTNIKLWDIRRKGC-VFRYRGHSQAVRCLRFSP 157
>RGD|1561436 [details] [associations]
symbol:LOC363267 "hypothetical protein LOC363267" species:10116
"Rattus norvegicus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1561436 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000253909 HOVERGEN:HBG103651 OMA:RKCISKL
EMBL:BC091226 IPI:IPI00367113 RefSeq:NP_001020196.1
UniGene:Rn.104466 ProteinModelPortal:Q5BK30 PRIDE:Q5BK30
Ensembl:ENSRNOT00000021813 GeneID:363267 KEGG:rno:363267
UCSC:RGD:1561436 InParanoid:Q5BK30 NextBio:683054
Genevestigator:Q5BK30 Uniprot:Q5BK30
Length = 415
Score = 120 (47.3 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 26/80 (32%), Positives = 47/80 (58%)
Query: 46 LEGHQGCVNAISWNSK-GSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPE 104
LEGH+ V AI++N+ G + +GS D +WS + K H+ GH+A + C F P+
Sbjct: 130 LEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSAETGKCYHTFR-GHTAEIVCLSFNPQ 188
Query: 105 TSDELVVSGAGDAEVRLFNL 124
++ +V +G+ D +L+++
Sbjct: 189 ST--VVATGSMDTTAKLWDI 206
Score = 120 (47.3 bits), Expect = 0.00060, P = 0.00060
Identities = 31/118 (26%), Positives = 60/118 (50%)
Query: 7 HDGSIYDM-LD-TRHTDTRPDVNHSLQMHSSLVRRLSQERELEGHQGCVNAISWNSKGSL 64
HD I D D T + + +++++ R+ + LEGH+G ++ IS+N +G+
Sbjct: 302 HDDEILDSCFDYTGKLIATASADGTARVYNATTRKCITK--LEGHEGEISKISFNPQGNR 359
Query: 65 LISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPETSDELVVSGAGDAEVRLF 122
L++GS D +W + + L +E GH+ +F F +V++G+ D R++
Sbjct: 360 LLTGSSDKTARIWDVQTGQCLQVLE-GHTDEIFSCAF--NYKGNIVITGSKDNSCRIW 414
Score = 95 (38.5 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 36/143 (25%), Positives = 67/143 (46%)
Query: 48 GHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPETSD 107
GH + +S+N + +++ +GS DT +W S + + ++ TGH A + F +TS
Sbjct: 175 GHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSGEEVVTL-TGHLAEIISLSF--DTSG 231
Query: 108 ELVVSGAGDAEVRLFNLSRFSGRG----LDDNAITPSALYQCHTRRVKKLAVEVGNPHVV 163
+ +++G+ D V +++ S +GR + A SAL+ + L + ++
Sbjct: 232 DRIITGSFDHTVVVWDAS--TGRKVHTLIGHCAEISSALFSWDCSLI--LTGSMDKTCML 287
Query: 164 WSASED---GTLRQHDFRQGSSC 183
W A+ TL HD SC
Sbjct: 288 WDATSGKCVATLTGHDDEILDSC 310
Score = 90 (36.7 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 24/85 (28%), Positives = 48/85 (56%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L GH + ++S+++ G +I+GS D + VW S+ + +H++ GH A + F +
Sbjct: 215 LTGHLAEIISLSFDTSGDRIITGSFDHTVVVWDASTGRKVHTL-IGHCAEISSALFSWDC 273
Query: 106 SDELVVSGAGDAEVRLFNLSRFSGR 130
S L+++G+ D L++ + SG+
Sbjct: 274 S--LILTGSMDKTCMLWDAT--SGK 294
Score = 88 (36.0 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 19/59 (32%), Positives = 31/59 (52%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDC-VVATSGIDNTIKIW 696
GD I +GS D +W+ TGR + L+G A ++ +DC ++ T +D T +W
Sbjct: 231 GDRIITGSFDHTVVVWDASTGRKVHTLIGHCAEISSA-LFSWDCSLILTGSMDKTCMLW 288
Score = 87 (35.7 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 22/70 (31%), Positives = 40/70 (57%)
Query: 628 DIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGD-EAVVNCVQCHPFDCVVAT 686
+I + SF Q G+ + +GS D IW+ QTG+ +++L G + + +C + + V+ T
Sbjct: 347 EISKISFNPQ-GNRLLTGSSDKTARIWDVQTGQCLQVLEGHTDEIFSCAFNYKGNIVI-T 404
Query: 687 SGIDNTIKIW 696
DN+ +IW
Sbjct: 405 GSKDNSCRIW 414
Score = 84 (34.6 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 23/78 (29%), Positives = 39/78 (50%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L H + ++ N GS I+GS D VW +S + LH++E GH V+ F
Sbjct: 88 LRAHILPLTNVALNKAGSCFITGSYDRTCKVWDTASGEELHTLE-GHRNVVYAIAFNNPY 146
Query: 106 SDELVVSGAGDAEVRLFN 123
D+ + +G+ D +L++
Sbjct: 147 GDK-IATGSFDKTCKLWS 163
Score = 72 (30.4 bits), Expect = 9.3e-07, Sum P(2) = 9.3e-07
Identities = 20/79 (25%), Positives = 39/79 (49%)
Query: 620 VGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLG-DEAVVNCVQCH 678
+GHC +I A F I +GS D +W+ +G+ + L G D+ +++ C
Sbjct: 258 IGHC---AEISSALFSWDCS-LILTGSMDKTCMLWDATSGKCVATLTGHDDEILD--SCF 311
Query: 679 PFDC-VVATSGIDNTIKIW 696
+ ++AT+ D T +++
Sbjct: 312 DYTGKLIATASADGTARVY 330
Score = 68 (29.0 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 17/58 (29%), Positives = 27/58 (46%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW 696
G IA+ S DG ++ T + I L G E ++ + +P + T D T +IW
Sbjct: 315 GKLIATASADGTARVYNATTRKCITKLEGHEGEISKISFNPQGNRLLTGSSDKTARIW 372
Score = 46 (21.3 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 11/47 (23%), Positives = 23/47 (48%)
Query: 282 LTHVTFSPNGEEVLLSYSGEHVYLMDVNHAGGRAMRYTVGDASKIMS 328
++ ++F+P G +L S + + DV G+ ++ G +I S
Sbjct: 348 ISKISFNPQGNRLLTGSSDKTARIWDVQT--GQCLQVLEGHTDEIFS 392
>POMBASE|SPAC29E6.01 [details] [associations]
symbol:pof11 "F-box protein Pof11" species:4896
"Schizosaccharomyces pombe" [GO:0000151 "ubiquitin ligase complex"
evidence=ISM] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=ISM] [GO:0030674 "protein binding,
bridging" evidence=ISM] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
PomBase:SPAC29E6.01 GO:GO:0005829 GO:GO:0007126 EMBL:CU329670
GenomeReviews:CU329670_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030674 SUPFAM:SSF81383
GO:GO:0016567 GO:GO:0000151 KO:K03362 EMBL:Z66525 EMBL:AB061694
PIR:T38502 PIR:T50211 RefSeq:NP_594559.1 ProteinModelPortal:Q09855
IntAct:Q09855 EnsemblFungi:SPAC29E6.01.1 GeneID:2541707
KEGG:spo:SPAC29E6.01 OMA:CIEANDK OrthoDB:EOG4HQHSG NextBio:20802799
Uniprot:Q09855
Length = 506
Score = 109 (43.4 bits), Expect = 2.1e-08, Sum P(3) = 2.1e-08
Identities = 34/110 (30%), Positives = 58/110 (52%)
Query: 64 LLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPETSDELVVSGAGDAEVRLFN 123
+++SGS D ++VW +SR +L+ + GHS +V C F + L+VSG+ D+ + +++
Sbjct: 233 IMVSGSKDRTVSVWDVNSRFILYKLY-GHSGSVLCLDFCRRRN--LLVSGSSDSTIIIWD 289
Query: 124 LSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHVVWSASEDGTLR 173
+ R P +Y HT V L V V +++ S+S D T R
Sbjct: 290 ---WQNR-------RPLKVYFGHTDNV--LGVVVSENYII-SSSRDHTAR 326
Score = 106 (42.4 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 40/147 (27%), Positives = 65/147 (44%)
Query: 45 ELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPE 104
+L GH G V + + + +LL+SGS D+ I +W + +R+ L + GH+ NV
Sbjct: 256 KLYGHSGSVLCLDFCRRRNLLVSGSSDSTIIIWDWQNRRPL-KVYFGHTDNVLGVV---- 310
Query: 105 TSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHVVW 164
S+ ++S + D R++ L S A + + H V + +V
Sbjct: 311 VSENYIISSSRDHTARVWRLDATSP------AEACMHVLRGHLASVNSVQYSSKTGLIV- 363
Query: 165 SASEDGTLRQHDFRQGSSCPPAGSSHQ 191
+AS D TLR D G C +HQ
Sbjct: 364 TASSDRTLRTWDITTGH-CIRIIHAHQ 389
Score = 98 (39.6 bits), Expect = 2.1e-08, Sum P(3) = 2.1e-08
Identities = 21/58 (36%), Positives = 35/58 (60%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW 696
G +I SGS D I+E +G+L++ML G E ++ V+ + D + + G D T++IW
Sbjct: 399 GKFIVSGSSDLTIRIFEASSGKLLRMLQGHEDLIRTVRFN--DEKIVSGGYDGTVRIW 454
Score = 51 (23.0 bits), Expect = 0.00097, Sum P(3) = 0.00097
Identities = 16/59 (27%), Positives = 28/59 (47%)
Query: 642 IASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIWTPSA 700
I + S D W+ TG I+++ + + C Q + V +S D TI+I+ S+
Sbjct: 362 IVTASSDRTLRTWDITTGHCIRIIHAHQRGIACAQYNGKFIVSGSS--DLTIRIFEASS 418
Score = 46 (21.3 bits), Expect = 2.1e-08, Sum P(3) = 2.1e-08
Identities = 8/14 (57%), Positives = 10/14 (71%)
Query: 385 EACNEVLEGHLSGI 398
EAC VL GHL+ +
Sbjct: 337 EACMHVLRGHLASV 350
>UNIPROTKB|A6QQU1 [details] [associations]
symbol:KATNB1 "KATNB1 protein" species:9913 "Bos taurus"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0031117 "positive
regulation of microtubule depolymerization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] [GO:0007026 "negative regulation of
microtubule depolymerization" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
HOGENOM:HOG000008039 GO:GO:0008352 PANTHER:PTHR19845 CTD:10300
HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP GO:GO:0031117
EMBL:DAAA02046527 EMBL:BC149991 IPI:IPI00867365
RefSeq:NP_001095379.1 UniGene:Bt.3402 Ensembl:ENSBTAT00000053556
GeneID:508813 KEGG:bta:508813 InParanoid:A6QQU1 NextBio:20868691
Uniprot:A6QQU1
Length = 663
Score = 124 (48.7 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 39/137 (28%), Positives = 66/137 (48%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L GH V ++ N+ L+++GS I VW + K+L ++ GH AN+ F P
Sbjct: 59 LTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTL-MGHKANICSLDFHPY- 116
Query: 106 SDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHVVW- 164
E V SG+ D ++L+++ R +G Y+ H++ V+ L +P W
Sbjct: 117 -GEFVASGSQDTNIKLWDIRR---KGCVFR-------YRGHSQAVRCLRF---SPDGKWL 162
Query: 165 -SASEDGTLRQHDFRQG 180
SA++D T++ D G
Sbjct: 163 ASAADDHTVKLWDLTAG 179
Score = 109 (43.4 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 24/82 (29%), Positives = 47/82 (57%)
Query: 44 RELEGHQGCVNA-ISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFV 102
+E+ H V++ + + G LL +G DD +N+WS + + S+ TGH++ V +
Sbjct: 14 QEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSL-TGHTSPVESVRL- 71
Query: 103 PETSDELVVSGAGDAEVRLFNL 124
T +EL+V+G+ +R+++L
Sbjct: 72 -NTPEELIVAGSQSGSIRVWDL 92
Score = 105 (42.0 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 28/97 (28%), Positives = 45/97 (46%)
Query: 618 RYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQC 677
RY GH ++ F G ++AS +DD +W+ G+++ G VN V+
Sbjct: 142 RYRGHSQA---VRCLRF-SPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEF 197
Query: 678 HPFDCVVATSGIDNTIKIWT-PSASVPSIVSGGAAGP 713
HP + ++A+ D TI+ W V S + G GP
Sbjct: 198 HPNEYLLASGSSDRTIRFWDLEKFQVVSCIEG-EPGP 233
Score = 104 (41.7 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 29/119 (24%), Positives = 55/119 (46%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIWTP 698
G+++ASGS D +W+ + + G V C++ P +A++ D+T+K+W
Sbjct: 117 GEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDL 176
Query: 699 SASVPSIVSGGAAGPDTADVLEAMESNQRKLSRNREHSLSYELLERFHMHEFSEGSLRP 757
+A G GP +V+E + S + + ++ + LE+F + EG P
Sbjct: 177 TAGKMMSEFPGHTGP--VNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGP 233
Score = 62 (26.9 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 14/59 (23%), Positives = 30/59 (50%)
Query: 642 IASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKI--WTP 698
+ASGS D W+ + +++ + G+ V + +P C + SG +++++ W P
Sbjct: 204 LASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSILFNPDGCCLY-SGCQDSLRVYGWEP 261
Score = 40 (19.1 bits), Expect = 0.00086, Sum P(3) = 0.00086
Identities = 13/52 (25%), Positives = 22/52 (42%)
Query: 281 HLTHVTFSPNGEEVLLSYSGEHVYLMDVNHAGGRAMRYTV-GDASKIMSFTP 331
++ + F P GE V ++ L D+ G RY A + + F+P
Sbjct: 107 NICSLDFHPYGEFVASGSQDTNIKLWDIRRKGC-VFRYRGHSQAVRCLRFSP 157
>UNIPROTKB|H3BPD8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
EMBL:AC018552 EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845
HGNC:HGNC:6217 Ensembl:ENST00000566726 Bgee:H3BPD8 Uniprot:H3BPD8
Length = 208
Score = 124 (48.7 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 39/137 (28%), Positives = 66/137 (48%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L GH V ++ N+ L+++GS I VW + K+L ++ GH AN+ F P
Sbjct: 63 LTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTL-MGHKANICSLDFHPY- 120
Query: 106 SDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHVVW- 164
E V SG+ D ++L+++ R +G Y+ H++ V+ L +P W
Sbjct: 121 -GEFVASGSQDTNIKLWDIRR---KGCVFR-------YRGHSQAVRCLRF---SPDGKWL 166
Query: 165 -SASEDGTLRQHDFRQG 180
SA++D T++ D G
Sbjct: 167 ASAADDHTVKLWDLTAG 183
Score = 108 (43.1 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 24/81 (29%), Positives = 46/81 (56%)
Query: 45 ELEGHQGCVNA-ISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP 103
E+ H V++ + + G LL +G DD +N+WS + + S+ TGH++ V +
Sbjct: 19 EIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSL-TGHTSPVESVRL-- 75
Query: 104 ETSDELVVSGAGDAEVRLFNL 124
T +EL+V+G+ +R+++L
Sbjct: 76 NTPEELIVAGSQSGSIRVWDL 96
Score = 88 (36.0 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 20/75 (26%), Positives = 36/75 (48%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIWTP 698
G+++ASGS D +W+ + + G V C++ P +A++ D+T+K+W
Sbjct: 121 GEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDL 180
Query: 699 SASVPSIVSGGAAGP 713
+A G GP
Sbjct: 181 TAGKMMSEFPGHTGP 195
Score = 72 (30.4 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 18/62 (29%), Positives = 29/62 (46%)
Query: 618 RYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQC 677
RY GH ++ F G ++AS +DD +W+ G+++ G VN V+
Sbjct: 146 RYRGHSQA---VRCLRF-SPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEF 201
Query: 678 HP 679
HP
Sbjct: 202 HP 203
>TAIR|locus:2154438 [details] [associations]
symbol:AT5G23430 "AT5G23430" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0005874
GO:GO:0080008 EMBL:AB018110 EMBL:BT002053 IPI:IPI00519668
IPI:IPI00532083 RefSeq:NP_197734.2 RefSeq:NP_851064.1
UniGene:At.45963 ProteinModelPortal:Q8H0T9 SMR:Q8H0T9 IntAct:Q8H0T9
PaxDb:Q8H0T9 PRIDE:Q8H0T9 EnsemblPlants:AT5G23430.1 GeneID:832409
KEGG:ath:AT5G23430 GeneFarm:2999 TAIR:At5g23430
HOGENOM:HOG000008039 InParanoid:Q8H0T9 OMA:DFKCHEG PhylomeDB:Q8H0T9
ProtClustDB:CLSN2717628 Genevestigator:Q8H0T9 GermOnline:AT5G23430
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 Uniprot:Q8H0T9
Length = 837
Score = 110 (43.8 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 26/100 (26%), Positives = 47/100 (47%)
Query: 619 YVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCH 678
Y GH G ++ + + G ++ SG +D +W+ G+L+ E + + H
Sbjct: 139 YKGHTR-GVNVLRFT---PDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFH 194
Query: 679 PFDCVVATSGIDNTIKIWTPSASVPSIVSGGAAGPDTADV 718
P + ++AT D T+K W ++ G+ GP+TA V
Sbjct: 195 PHEFLLATGSADRTVKFW--DLETFELI--GSGGPETAGV 230
Score = 105 (42.0 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 24/88 (27%), Positives = 46/88 (52%)
Query: 38 RRLSQERELEGHQGCVNAISWNSKGS-LLISGSDDTHINVWSYSSRKLLHSIETGHSANV 96
+R + +E H VN + K S +L++G +D +N+W+ + S+ GHS+ +
Sbjct: 4 KRAYKLQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLY-GHSSGI 62
Query: 97 FCTKFVPETSDELVVSGAGDAEVRLFNL 124
F + S+ LV +GA ++L++L
Sbjct: 63 DSVTF--DASEVLVAAGAASGTIKLWDL 88
Score = 78 (32.5 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 20/62 (32%), Positives = 30/62 (48%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIWTP 698
G++ ASGS D IW+ + I G VN ++ P V + G DN +K+W
Sbjct: 113 GEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDL 172
Query: 699 SA 700
+A
Sbjct: 173 TA 174
>MGI|MGI:1923896 [details] [associations]
symbol:Wdr38 "WD repeat domain 38" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1923896 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00700000104017
HSSP:P63005 EMBL:AL844588 HOGENOM:HOG000091642 EMBL:AK007246
EMBL:AK077027 EMBL:BC115629 IPI:IPI00112284 RefSeq:NP_083963.1
UniGene:Mm.358777 UniGene:Mm.477090 ProteinModelPortal:Q9D994
SMR:Q9D994 PRIDE:Q9D994 Ensembl:ENSMUST00000039535
Ensembl:ENSMUST00000112872 GeneID:76646 KEGG:mmu:76646
UCSC:uc008jnx.2 CTD:401551 HOVERGEN:HBG106736 InParanoid:Q9D994
OMA:VARAKCL OrthoDB:EOG4ZW5BD ChiTaRS:WDR38 NextBio:345540
Bgee:Q9D994 CleanEx:MM_WDR38 Genevestigator:Q9D994 Uniprot:Q9D994
Length = 303
Score = 106 (42.4 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 30/98 (30%), Positives = 50/98 (51%)
Query: 27 NHSLQMHSSLVRRLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLH 86
+HS+++ V R L+GHQ V +S++ L SG D VW S + +H
Sbjct: 89 DHSIRLWD--VARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQSGRRVH 146
Query: 87 SIETGHSANVFCTKFVPETSDELVVSGAGDAEVRLFNL 124
+ GH ++ + F P TSD L +G+ D+ V +++L
Sbjct: 147 LL-VGHCDSIQSSDFSP-TSDSLA-TGSWDSTVHIWDL 181
Score = 102 (41.0 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 25/78 (32%), Positives = 41/78 (52%)
Query: 49 HQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPETSDE 108
H G VN +++ G L++ SDD + VW S +LL + GH V F P+
Sbjct: 25 HHGEVNCSAFSPDGRTLLTASDDGCVYVWGTKSGRLLWRL-AGHRGPVKSCCFSPD--GR 81
Query: 109 LVVSGAGDAEVRLFNLSR 126
L+ S + D +RL++++R
Sbjct: 82 LIASSSSDHSIRLWDVAR 99
Score = 102 (41.0 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 26/85 (30%), Positives = 42/85 (49%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L GH+G V + ++ G L+ S S D I +W + K LH ++ GH +V F P++
Sbjct: 64 LAGHRGPVKSCCFSPDGRLIASSSSDHSIRLWDVARSKCLHVLK-GHQRSVETVSFSPDS 122
Query: 106 SDELVVSGAGDAEVRLFNLSRFSGR 130
+ SG D ++ + SGR
Sbjct: 123 KQ--LASGGWDKRAIVWEVQ--SGR 143
Score = 101 (40.6 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 24/66 (36%), Positives = 35/66 (53%)
Query: 642 IASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIWTPSAS 701
+ASG D R +WE Q+GR + +L+G + P +AT D+T+ IW AS
Sbjct: 125 LASGGWDKRAIVWEVQSGRRVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRAS 184
Query: 702 VPSIVS 707
P +VS
Sbjct: 185 TP-VVS 189
Score = 86 (35.3 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 26/93 (27%), Positives = 44/93 (47%)
Query: 620 VGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKM---LLGDEAVVNCVQ 676
VGHC D Q+S D +A+GS D IW+ + + L G ++C+
Sbjct: 149 VGHC----DSIQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVVSYHNLEGHTGNISCL- 203
Query: 677 CHPFDCVVATSGIDNTIKIWTPSAS-VPSIVSG 708
C+ ++A+ D TI +W P+ + +P + G
Sbjct: 204 CYSASGLLASGSWDKTICVWKPTTNNLPLQLKG 236
Score = 81 (33.6 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 18/55 (32%), Positives = 28/55 (50%)
Query: 642 IASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW 696
+ASGS D +W+ T L L G VN + P + +A++G T+K+W
Sbjct: 211 LASGSWDKTICVWKPTTNNLPLQLKGHTIWVNSLAFSPDELKLASAGYSRTVKVW 265
>ASPGD|ASPL0000003533 [details] [associations]
symbol:AN6867 species:162425 "Emericella nidulans"
[GO:0000002 "mitochondrial genome maintenance" evidence=IEA]
[GO:0000266 "mitochondrial fission" evidence=IEA] [GO:0016559
"peroxisome fission" evidence=IEA] [GO:0005741 "mitochondrial outer
membrane" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005741 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001301 EMBL:AACD01000113 HOGENOM:HOG000048466
OrthoDB:EOG469V30 RefSeq:XP_664471.1 HSSP:P46680
ProteinModelPortal:Q5AXW3 STRING:Q5AXW3
EnsemblFungi:CADANIAT00007667 GeneID:2870567 KEGG:ani:AN6867.2
OMA:CVQTLDV Uniprot:Q5AXW3
Length = 654
Score = 121 (47.7 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 53/193 (27%), Positives = 87/193 (45%)
Query: 6 FHDGSIYDMLDT-RHTDTRPDVNHSLQ-MHSSLVRRLSQERELEGHQGCVNAISWNSK-G 62
F SIY L + R R S+ +H S+ +E + H V A+ + G
Sbjct: 280 FMSESIYQKLPSPRSLKHRSIRKRSMPVLHEHFAPG-SEIKEFQAHTDVVTALDLDYPFG 338
Query: 63 SLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPETSDELVVSGAGDAEVRLF 122
+++ + DDT + VW + + +E GH+A+V C + D +V +G+ DA V+L+
Sbjct: 339 TMITAALDDT-VRVWDLNIGRCTGFLE-GHNASVRCLQI----EDNVVATGSMDATVKLW 392
Query: 123 NLSRFS--------GRGLDDNAIT---PSALYQCHTRRVKKLAVEVGNPH----VVWSAS 167
+LSR + DD+A++ ++L CH + EV H + S S
Sbjct: 393 DLSRARTTHRDNRVNKDEDDDAVSVAYSTSLEDCHVYSLDAHVGEVTALHFKGNTLVSGS 452
Query: 168 EDGTLRQHDFRQG 180
D TLR D +G
Sbjct: 453 ADKTLRHWDLVKG 465
Score = 90 (36.7 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 19/56 (33%), Positives = 35/56 (62%)
Query: 642 IASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCV-VATSGIDNTIKIW 696
+A G+ DG +W+ ++G++ + L+G V+C+Q FD V + T +D +I+IW
Sbjct: 513 LACGTADGMVRLWDLRSGQVHRSLVGHTGPVSCLQ---FDDVHLVTGSLDRSIRIW 565
Score = 48 (22.0 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 16/44 (36%), Positives = 21/44 (47%)
Query: 672 VNCVQCHPFDCVVATSGIDNTIKIWT-PSASVP-SIVSGGAAGP 713
V VQC FD +A D +++W S V S+V G GP
Sbjct: 503 VGAVQC--FDAALACGTADGMVRLWDLRSGQVHRSLV--GHTGP 542
>TAIR|locus:2159562 [details] [associations]
symbol:AT5G08560 "AT5G08560" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0007062 "sister chromatid
cohesion" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0009887 "organ morphogenesis" evidence=RCA]
[GO:0009888 "tissue development" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0010359 "regulation of anion channel activity"
evidence=RCA] [GO:0010413 "glucuronoxylan metabolic process"
evidence=RCA] [GO:0010638 "positive regulation of organelle
organization" evidence=RCA] [GO:0016926 "protein desumoylation"
evidence=RCA] [GO:0031048 "chromatin silencing by small RNA"
evidence=RCA] [GO:0033044 "regulation of chromosome organization"
evidence=RCA] [GO:0042138 "meiotic DNA double-strand break
formation" evidence=RCA] [GO:0045132 "meiotic chromosome
segregation" evidence=RCA] [GO:0045492 "xylan biosynthetic process"
evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
EMBL:CP002688 GenomeReviews:BA000015_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 EMBL:AB006697
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
HOGENOM:HOG000160946 OMA:IRGQFYQ EMBL:AY054535 EMBL:AY064639
IPI:IPI00526669 RefSeq:NP_001078546.1 RefSeq:NP_196473.1
UniGene:At.20607 ProteinModelPortal:Q9FNN2 SMR:Q9FNN2 IntAct:Q9FNN2
PaxDb:Q9FNN2 PRIDE:Q9FNN2 EnsemblPlants:AT5G08560.1
EnsemblPlants:AT5G08560.2 GeneID:830756 KEGG:ath:AT5G08560
TAIR:At5g08560 InParanoid:Q9FNN2 PhylomeDB:Q9FNN2
ProtClustDB:CLSN2687467 Genevestigator:Q9FNN2 Uniprot:Q9FNN2
Length = 589
Score = 141 (54.7 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 32/80 (40%), Positives = 47/80 (58%)
Query: 618 RYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQC 677
RY GH I ++ F G + +IASGS+D + +IW + TG+LI L G VNCV
Sbjct: 481 RYKGHKR-SRFIIRSCFGGYKQAFIASGSEDSQVYIWHRSTGKLIVELPGHAGAVNCVSW 539
Query: 678 HPFDC-VVATSGIDNTIKIW 696
P + ++A++ D TI+IW
Sbjct: 540 SPTNLHMLASASDDGTIRIW 559
Score = 67 (28.6 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 21/86 (24%), Positives = 40/86 (46%)
Query: 40 LSQERELEGHQGCVNAISWNSKG-SLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFC 98
+S + L GH V AI W+ +L G+++ I W S +H E G + + C
Sbjct: 309 ISLKHTLVGHHKPVIAILWSPDDRQVLTCGAEEV-IRRWDVDSGDCVHMYEKGGISPISC 367
Query: 99 TKFVPETSDELVVSGAGDAEVRLFNL 124
+ P+ +++G D + +++L
Sbjct: 368 GWY-PDGQG--IIAGMTDRSICMWDL 390
Score = 56 (24.8 bits), Expect = 6.2e-07, Sum P(2) = 6.2e-07
Identities = 20/82 (24%), Positives = 36/82 (43%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSR---KLLHSIETGHSANVFCTKFV 102
LE H V + ++ G L S S D +W S+ L H++ GH V +
Sbjct: 270 LESHTDEVWFLQFSHNGKYLASSSKDQTAIIWEISADGHISLKHTL-VGHHKPVIAILWS 328
Query: 103 PETSDELVVSGAGDAEVRLFNL 124
P+ D V++ + +R +++
Sbjct: 329 PD--DRQVLTCGAEEVIRRWDV 348
Score = 46 (21.3 bits), Expect = 6.5e-06, Sum P(2) = 6.5e-06
Identities = 11/36 (30%), Positives = 18/36 (50%)
Query: 50 QGCVNAIS--WNSKGSLLISGSDDTHINVWSYSSRK 83
+G ++ IS W G +I+G D I +W R+
Sbjct: 359 KGGISPISCGWYPDGQGIIAGMTDRSICMWDLDGRE 394
>FB|FBgn0038927 [details] [associations]
symbol:CG6015 species:7227 "Drosophila melanogaster"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0071011
"precatalytic spliceosome" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE014297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 KO:K12816 GeneTree:ENSGT00530000063583 EMBL:AY069490
RefSeq:NP_651005.1 UniGene:Dm.20226 SMR:Q9VD52 IntAct:Q9VD52
STRING:Q9VD52 EnsemblMetazoa:FBtr0084183 GeneID:42593
KEGG:dme:Dmel_CG6015 UCSC:CG6015-RA FlyBase:FBgn0038927
InParanoid:Q9VD52 OMA:PEDIEGF OrthoDB:EOG493202 GenomeRNAi:42593
NextBio:829587 Uniprot:Q9VD52
Length = 576
Score = 112 (44.5 bits), Expect = 4.7e-08, Sum P(2) = 4.7e-08
Identities = 23/77 (29%), Positives = 40/77 (51%)
Query: 44 RELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP 103
R GH+ + I+WN++G+ +S S D +I +W + ++ T FC KF P
Sbjct: 323 RTFSGHRQAIKDIAWNNRGTNFLSASYDRYIKLWDAETGDVVSRFTTRKMP--FCVKFHP 380
Query: 104 ETSDE-LVVSGAGDAEV 119
+ S + L V+G D ++
Sbjct: 381 DNSKQHLFVAGTSDKKI 397
Score = 97 (39.2 bits), Expect = 4.7e-08, Sum P(2) = 4.7e-08
Identities = 25/85 (29%), Positives = 39/85 (45%)
Query: 613 IDMKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVV 672
++ K+ + GH G Q F Y+ SG DG+ +IW+ +T ++ K + V
Sbjct: 493 MNRKKTFTGHMVSGYAC-QLDFSPDMS-YLVSGDGDGKCYIWDWKTTKMYKKWQAHDGVC 550
Query: 673 NCVQCHPFDCV-VATSGIDNTIKIW 696
HP + V T+G D IK W
Sbjct: 551 ISALWHPHEASKVVTAGWDGQIKYW 575
Score = 73 (30.8 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 16/47 (34%), Positives = 27/47 (57%)
Query: 48 GHQGCVNAISWNSKGS-LLISGSDDTHINVWS-YSSRKLLHSIETGH 92
GH +++I W K + LL+SGS D + +W Y R+ + + +GH
Sbjct: 283 GHNKGISSIRWFPKTAHLLLSGSMDCRVKLWEVYGERRCIRTF-SGH 328
>UNIPROTKB|E1BV27 [details] [associations]
symbol:TBL1X "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003682 "chromatin binding" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0043627 "response to estrogen stimulus"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0045444 "fat cell differentiation"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0003714
GO:GO:0045892 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0003682 GO:GO:0005667
GO:GO:0044212 GO:GO:0043627 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045444 GeneTree:ENSGT00690000102024 KO:K04508 CTD:6907
OMA:RAHSVNN EMBL:AADN02017315 EMBL:AADN02017316 EMBL:AADN02017317
EMBL:AADN02017318 EMBL:AADN02017319 EMBL:AADN02017320
EMBL:AADN02017321 EMBL:AADN02017322 EMBL:AADN02017323
EMBL:AADN02017324 IPI:IPI00589153 RefSeq:NP_001153226.1
UniGene:Gga.5909 ProteinModelPortal:E1BV27
Ensembl:ENSGALT00000021808 GeneID:426045 KEGG:gga:426045
NextBio:20827776 Uniprot:E1BV27
Length = 523
Score = 147 (56.8 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 41/135 (30%), Positives = 68/135 (50%)
Query: 2 ENFPFHDGSIYDMLDTRHTDTRPDVNHSLQMHSSLVRRLSQEREL---EGHQGCVNAISW 58
+ FPFH D+ D ++ T + + +H V RL +R + +GH VNAI W
Sbjct: 311 QQFPFHSAPALDV-DWQNNTTFASCSTDMCIH---VCRLGCDRPVKTFQGHTNEVNAIKW 366
Query: 59 NSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPE---TSDE----LVV 111
+ G LL S SDD + +WS +H ++ HS ++ K+ P TS+ ++
Sbjct: 367 DPSGMLLASCSDDMTLKIWSMKQDTCVHDLQA-HSKEIYTIKWSPTGPGTSNPNSNIMLA 425
Query: 112 SGAGDAEVRLFNLSR 126
S + D+ VRL+++ R
Sbjct: 426 SASFDSTVRLWDVDR 440
Score = 59 (25.8 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 13/29 (44%), Positives = 16/29 (55%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLG 667
G Y+ASGS D IW Q+G L+ G
Sbjct: 463 GKYLASGSFDKCVHIWNTQSGTLVHSYRG 491
Score = 54 (24.1 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 17/62 (27%), Positives = 26/62 (41%)
Query: 642 IASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW-TPSA 700
+AS S D +W+ G I L + V V P +A+ D + IW T S
Sbjct: 424 LASASFDSTVRLWDVDRGVCIHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSG 483
Query: 701 SV 702
++
Sbjct: 484 TL 485
>MGI|MGI:1336172 [details] [associations]
symbol:Tbl1x "transducin (beta)-like 1 X-linked"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0003714 "transcription corepressor
activity" evidence=ISO;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO] [GO:0005667
"transcription factor complex" evidence=IDA] [GO:0005876 "spindle
microtubule" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0006508 "proteolysis" evidence=ISO] [GO:0007605 "sensory
perception of sound" evidence=ISO] [GO:0008013 "beta-catenin
binding" evidence=ISO] [GO:0008022 "protein C-terminus binding"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0017053 "transcriptional repressor complex"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0042393 "histone binding" evidence=ISO]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IMP] [GO:0043627 "response to estrogen stimulus"
evidence=IMP] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO;IDA] [GO:0045444 "fat cell differentiation"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO;IMP] [GO:0048545 "response to steroid hormone
stimulus" evidence=IMP] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 MGI:MGI:1336172 GO:GO:0003714
GO:GO:0045892 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0003682 GO:GO:0005667 GO:GO:0044212 GO:GO:0043627
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045444
GeneTree:ENSGT00690000102024 KO:K04508 HOGENOM:HOG000220902
OrthoDB:EOG412M5M CTD:6907 EMBL:AK030547 EMBL:AK031937
EMBL:AK038674 EMBL:BC043105 EMBL:F38006 IPI:IPI00223056
RefSeq:NP_065626.1 UniGene:Mm.258476 ProteinModelPortal:Q9QXE7
SMR:Q9QXE7 STRING:Q9QXE7 PhosphoSite:Q9QXE7 PaxDb:Q9QXE7
PRIDE:Q9QXE7 Ensembl:ENSMUST00000088217 GeneID:21372 KEGG:mmu:21372
InParanoid:Q9QXE7 NextBio:300588 Bgee:Q9QXE7 CleanEx:MM_TBL1X
Genevestigator:Q9QXE7 GermOnline:ENSMUSG00000025246 Uniprot:Q9QXE7
Length = 527
Score = 147 (56.8 bits), Expect = 4.9e-08, Sum P(2) = 4.9e-08
Identities = 41/135 (30%), Positives = 68/135 (50%)
Query: 2 ENFPFHDGSIYDMLDTRHTDTRPDVNHSLQMHSSLVRRLSQEREL---EGHQGCVNAISW 58
+ FPFH D+ D ++ T + + +H V RL +R + +GH VNAI W
Sbjct: 315 QQFPFHSAPALDV-DWQNNTTFASCSTDMCIH---VCRLGCDRPVKTFQGHTNEVNAIKW 370
Query: 59 NSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPE---TSDE----LVV 111
+ G LL S SDD + +WS +H ++ HS ++ K+ P TS+ ++
Sbjct: 371 DPSGMLLASCSDDMTLKIWSMKQDACVHDLQA-HSKEIYTIKWSPTGPATSNPNSNIMLA 429
Query: 112 SGAGDAEVRLFNLSR 126
S + D+ VRL+++ R
Sbjct: 430 SASFDSTVRLWDVER 444
Score = 59 (25.8 bits), Expect = 4.9e-08, Sum P(2) = 4.9e-08
Identities = 13/29 (44%), Positives = 16/29 (55%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLG 667
G Y+ASGS D IW Q+G L+ G
Sbjct: 467 GKYLASGSFDKCVHIWNTQSGSLVHSYRG 495
Score = 59 (25.8 bits), Expect = 4.9e-08, Sum P(2) = 4.9e-08
Identities = 18/62 (29%), Positives = 27/62 (43%)
Query: 642 IASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW-TPSA 700
+AS S D +W+ + G I L + V V P +A+ D + IW T S
Sbjct: 428 LASASFDSTVRLWDVERGVCIHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSG 487
Query: 701 SV 702
S+
Sbjct: 488 SL 489
>RGD|1563868 [details] [associations]
symbol:Tbl1x "transducin (beta)-like 1 X-linked" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003682 "chromatin binding"
evidence=IEA;ISO] [GO:0003714 "transcription corepressor activity"
evidence=IEA;ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005667 "transcription
factor complex" evidence=IEA;ISO] [GO:0005876 "spindle microtubule"
evidence=ISO] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0006508 "proteolysis"
evidence=ISO] [GO:0007605 "sensory perception of sound"
evidence=ISO] [GO:0008013 "beta-catenin binding" evidence=ISO]
[GO:0008022 "protein C-terminus binding" evidence=ISO] [GO:0008134
"transcription factor binding" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0017053 "transcriptional
repressor complex" evidence=ISO] [GO:0019904 "protein domain
specific binding" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA;ISO] [GO:0043627 "response to
estrogen stimulus" evidence=IEA;ISO] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA;ISO] [GO:0045444 "fat
cell differentiation" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0048545
"response to steroid hormone stimulus" evidence=ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISO]
[GO:0000118 "histone deacetylase complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:1563868
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 GeneTree:ENSGT00690000102024
KO:K04508 EMBL:CH473966 CTD:6907 RefSeq:NP_001100434.1
UniGene:Rn.107002 SMR:G3V6G5 Ensembl:ENSRNOT00000004901
GeneID:302711 KEGG:rno:302711 NextBio:650027 Uniprot:G3V6G5
Length = 527
Score = 147 (56.8 bits), Expect = 4.9e-08, Sum P(2) = 4.9e-08
Identities = 41/135 (30%), Positives = 68/135 (50%)
Query: 2 ENFPFHDGSIYDMLDTRHTDTRPDVNHSLQMHSSLVRRLSQEREL---EGHQGCVNAISW 58
+ FPFH D+ D ++ T + + +H V RL +R + +GH VNAI W
Sbjct: 315 QQFPFHSAPALDV-DWQNNTTFASCSTDMCIH---VCRLGCDRPVKTFQGHTNEVNAIKW 370
Query: 59 NSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPE---TSDE----LVV 111
+ G LL S SDD + +WS +H ++ HS ++ K+ P TS+ ++
Sbjct: 371 DPSGMLLASCSDDMTLKIWSMKQDACVHDLQA-HSKEIYTIKWSPTGPATSNPNSNIMLA 429
Query: 112 SGAGDAEVRLFNLSR 126
S + D+ VRL+++ R
Sbjct: 430 SASFDSTVRLWDVER 444
Score = 59 (25.8 bits), Expect = 4.9e-08, Sum P(2) = 4.9e-08
Identities = 13/29 (44%), Positives = 16/29 (55%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLG 667
G Y+ASGS D IW Q+G L+ G
Sbjct: 467 GKYLASGSFDKCVHIWNTQSGSLVHSYRG 495
Score = 59 (25.8 bits), Expect = 4.9e-08, Sum P(2) = 4.9e-08
Identities = 18/62 (29%), Positives = 27/62 (43%)
Query: 642 IASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW-TPSA 700
+AS S D +W+ + G I L + V V P +A+ D + IW T S
Sbjct: 428 LASASFDSTVRLWDVERGVCIHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSG 487
Query: 701 SV 702
S+
Sbjct: 488 SL 489
>UNIPROTKB|B7TCI5 [details] [associations]
symbol:TBL1X "Transducin beta-like 1" species:9913 "Bos
taurus" [GO:0006508 "proteolysis" evidence=ISS] [GO:0007605
"sensory perception of sound" evidence=ISS] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0003714 "transcription corepressor activity"
evidence=ISS] [GO:0008013 "beta-catenin binding" evidence=ISS]
[GO:0042393 "histone binding" evidence=ISS] [GO:0005876 "spindle
microtubule" evidence=ISS] [GO:0017053 "transcriptional repressor
complex" evidence=ISS] [GO:0045444 "fat cell differentiation"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0043627 "response to estrogen stimulus"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006508
GO:GO:0003682 GO:GO:0005667 GO:GO:0000122 GO:GO:0044212
GO:GO:0007605 GO:GO:0043627 InterPro:IPR013720 Pfam:PF08513
GO:GO:0042393 GO:GO:0045444 GO:GO:0008013 GO:GO:0060070
GO:GO:0005876 GeneTree:ENSGT00690000102024 KO:K04508
HOGENOM:HOG000220902 HOVERGEN:HBG050240 OrthoDB:EOG412M5M CTD:6907
OMA:RAHSVNN EMBL:FJ195366 EMBL:DAAA02075574 IPI:IPI00717120
RefSeq:NP_001138704.1 UniGene:Bt.27699 STRING:B7TCI5
Ensembl:ENSBTAT00000024105 GeneID:515972 KEGG:bta:515972
NextBio:20872077 Uniprot:B7TCI5
Length = 528
Score = 147 (56.8 bits), Expect = 4.9e-08, Sum P(2) = 4.9e-08
Identities = 41/135 (30%), Positives = 68/135 (50%)
Query: 2 ENFPFHDGSIYDMLDTRHTDTRPDVNHSLQMHSSLVRRLSQEREL---EGHQGCVNAISW 58
+ FPFH D+ D ++ T + + +H V RL +R + +GH VNAI W
Sbjct: 316 QQFPFHSAPALDV-DWQNNTTFASCSTDMCIH---VCRLGCDRPVKTFQGHTNEVNAIKW 371
Query: 59 NSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPE---TSDE----LVV 111
+ G LL S SDD + +WS +H ++ HS ++ K+ P TS+ ++
Sbjct: 372 DPSGMLLASCSDDMTLKIWSMKQDTCVHDLQA-HSKEIYTIKWSPTGPATSNPNSSIMLA 430
Query: 112 SGAGDAEVRLFNLSR 126
S + D+ VRL+++ R
Sbjct: 431 SASFDSTVRLWDVER 445
Score = 59 (25.8 bits), Expect = 4.9e-08, Sum P(2) = 4.9e-08
Identities = 13/29 (44%), Positives = 16/29 (55%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLG 667
G Y+ASGS D IW Q+G L+ G
Sbjct: 468 GKYLASGSFDKCVHIWNTQSGSLVHSYRG 496
Score = 57 (25.1 bits), Expect = 7.9e-08, Sum P(2) = 7.9e-08
Identities = 17/62 (27%), Positives = 27/62 (43%)
Query: 642 IASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW-TPSA 700
+AS S D +W+ + G + L + V V P +A+ D + IW T S
Sbjct: 429 LASASFDSTVRLWDVERGVCLHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSG 488
Query: 701 SV 702
S+
Sbjct: 489 SL 490
>UNIPROTKB|I3L2U8 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0001667 "ameboidal cell migration" evidence=IEA] [GO:0001675
"acrosome assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0007097 "nuclear migration" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007405 "neuroblast proliferation"
evidence=IEA] [GO:0007611 "learning or memory" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008090
"retrograde axon cargo transport" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031512 "motile primary cilium"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0033267 "axon part"
evidence=IEA] [GO:0036035 "osteoclast development" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0045505 "dynein
intermediate chain binding" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0047496
"vesicle transport along microtubule" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051081 "nuclear envelope disassembly" evidence=IEA]
[GO:0051219 "phosphoprotein binding" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0021766 GO:GO:0001764 GO:GO:0033267 GO:GO:0005871
GO:GO:0031252 GO:GO:0000226 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0030426
GO:GO:0007611 GO:GO:0007405 GO:GO:0008090 GO:GO:0045773
GO:GO:0001675 GO:GO:0005874 GO:GO:0032319 GO:GO:0007097
GO:GO:0021819 GO:GO:0047496 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 GO:GO:0051081
HGNC:HGNC:8574 ChiTaRS:PAFAH1B1 GO:GO:0051660 EMBL:AC015799
EMBL:AC005696 ProteinModelPortal:I3L2U8 SMR:I3L2U8
Ensembl:ENST00000573839 Bgee:I3L2U8 Uniprot:I3L2U8
Length = 345
Score = 115 (45.5 bits), Expect = 5.1e-08, Sum P(2) = 5.1e-08
Identities = 38/156 (24%), Positives = 72/156 (46%)
Query: 37 VRRLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANV 96
+ R ++ L GH+ V + ++ S+++S S+D I VW Y + +++ GH+ +V
Sbjct: 30 IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLK-GHTDSV 88
Query: 97 FCTKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVE 156
F + S +L+ S + D ++L++ F I H V +A+
Sbjct: 89 QDISF--DHSGKLLASCSADMTIKLWDFQGFE-------CIRTM---HGHDHNVSSVAIM 136
Query: 157 VGNPHVVWSASEDGTLRQHDFRQGSSCPPAGSSHQE 192
H+V SAS D T++ + + G C + H+E
Sbjct: 137 PNGDHIV-SASRDKTIKMWEVQTGY-CVKTFTGHRE 170
Score = 87 (35.7 bits), Expect = 5.1e-08, Sum P(2) = 5.1e-08
Identities = 18/58 (31%), Positives = 28/58 (48%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW 696
G +I S +DD +W+ + R +K L E V + H V T +D T+K+W
Sbjct: 285 GKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 342
Score = 81 (33.6 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 19/71 (26%), Positives = 36/71 (50%)
Query: 626 GTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVA 685
G++ K++ G+ G ++ SGS D +W+ TG + L+G + V V H +
Sbjct: 233 GSETKKS---GKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFIL 289
Query: 686 TSGIDNTIKIW 696
+ D T+++W
Sbjct: 290 SCADDKTLRVW 300
Score = 49 (22.3 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 22/75 (29%), Positives = 31/75 (41%)
Query: 637 QRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHP---FDCVVATSGIDNTI 693
Q G IAS S+D +W T L E VV C+ P + + +G + T
Sbjct: 179 QDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSE-TK 237
Query: 694 KIWTPSASVPSIVSG 708
K P P ++SG
Sbjct: 238 KSGKPG---PFLLSG 249
>UNIPROTKB|O60907 [details] [associations]
symbol:TBL1X "F-box-like/WD repeat-containing protein
TBL1X" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=IMP] [GO:0003714 "transcription
corepressor activity" evidence=IGI;IDA] [GO:0042393 "histone
binding" evidence=IDA] [GO:0017053 "transcriptional repressor
complex" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006508 "proteolysis" evidence=IMP] [GO:0008022 "protein
C-terminus binding" evidence=IPI] [GO:0005876 "spindle microtubule"
evidence=IDA] [GO:0000118 "histone deacetylase complex"
evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0007605 "sensory
perception of sound" evidence=IMP] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0008013 "beta-catenin binding"
evidence=IPI] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0007219 "Notch signaling pathway" evidence=TAS] [GO:0044255
"cellular lipid metabolic process" evidence=TAS] [GO:0044281 "small
molecule metabolic process" evidence=TAS] Reactome:REACT_111217
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Reactome:REACT_111102
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0044281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0007219 GO:GO:0044255 GO:GO:0006351 GO:GO:0000122
GO:GO:0044212 GO:GO:0007605 InterPro:IPR013720 Pfam:PF08513
GO:GO:0042393 GO:GO:0060070 GO:GO:0005876 KO:K04508 EMBL:AC003036
HOGENOM:HOG000220902 HOVERGEN:HBG050240 OrthoDB:EOG412M5M
EMBL:Y12781 EMBL:AK289409 EMBL:AK290962 EMBL:BC032708 EMBL:BC052304
IPI:IPI00218132 IPI:IPI00640917 RefSeq:NP_001132938.1
RefSeq:NP_001132939.1 RefSeq:NP_001132940.1 RefSeq:NP_005638.1
UniGene:Hs.495656 PDB:2XTC PDB:2XTD PDB:2XTE PDBsum:2XTC
PDBsum:2XTD PDBsum:2XTE ProteinModelPortal:O60907 SMR:O60907
IntAct:O60907 STRING:O60907 PhosphoSite:O60907 PaxDb:O60907
PRIDE:O60907 Ensembl:ENST00000217964 Ensembl:ENST00000380961
Ensembl:ENST00000407597 Ensembl:ENST00000424279
Ensembl:ENST00000536365 GeneID:6907 KEGG:hsa:6907 UCSC:uc004csq.4
CTD:6907 GeneCards:GC0XP009431 HGNC:HGNC:11585 HPA:CAB005363
MIM:300196 neXtProt:NX_O60907 PharmGKB:PA36349 InParanoid:O60907
OMA:RAHSVNN PhylomeDB:O60907 ChiTaRS:TBL1X EvolutionaryTrace:O60907
GenomeRNAi:6907 NextBio:27011 ArrayExpress:O60907 Bgee:O60907
CleanEx:HS_TBL1X Genevestigator:O60907 GermOnline:ENSG00000101849
Uniprot:O60907
Length = 577
Score = 147 (56.8 bits), Expect = 5.1e-08, Sum P(2) = 5.1e-08
Identities = 40/135 (29%), Positives = 68/135 (50%)
Query: 2 ENFPFHDGSIYDMLDTRHTDTRPDVNHSLQMHSSLVRRLSQEREL---EGHQGCVNAISW 58
+ FPFH D+ D ++ T + + +H V RL +R + +GH VNAI W
Sbjct: 365 QQFPFHSAPALDV-DWQNNTTFASCSTDMCIH---VCRLGCDRPVKTFQGHTNEVNAIKW 420
Query: 59 NSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPE---TSDE----LVV 111
+ G LL S SDD + +WS +H ++ H+ ++ K+ P TS+ ++
Sbjct: 421 DPSGMLLASCSDDMTLKIWSMKQEVCIHDLQA-HNKEIYTIKWSPTGPATSNPNSNIMLA 479
Query: 112 SGAGDAEVRLFNLSR 126
S + D+ VRL+++ R
Sbjct: 480 SASFDSTVRLWDIER 494
Score = 60 (26.2 bits), Expect = 5.1e-08, Sum P(2) = 5.1e-08
Identities = 13/29 (44%), Positives = 16/29 (55%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLG 667
G Y+ASGS D IW Q+G L+ G
Sbjct: 517 GKYLASGSFDKCVHIWNTQSGNLVHSYRG 545
Score = 50 (22.7 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 16/62 (25%), Positives = 26/62 (41%)
Query: 642 IASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW-TPSA 700
+AS S D +W+ + G L + V V P +A+ D + IW T S
Sbjct: 478 LASASFDSTVRLWDIERGVCTHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSG 537
Query: 701 SV 702
++
Sbjct: 538 NL 539
>UNIPROTKB|F1SEX9 [details] [associations]
symbol:WDR83 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0000375 "RNA splicing, via transesterification reactions"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
GO:GO:0000375 GeneTree:ENSGT00700000104496 KO:K13124 OMA:CKQGAVR
EMBL:CU856041 RefSeq:XP_003123369.1 Ensembl:ENSSSCT00000014996
GeneID:100519823 KEGG:ssc:100519823 Uniprot:F1SEX9
Length = 311
Score = 107 (42.7 bits), Expect = 5.1e-08, Sum P(2) = 5.1e-08
Identities = 25/81 (30%), Positives = 44/81 (54%)
Query: 44 RELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP 103
R+ GH G VN + +N + ++++SGS D+ + W SRK ++T A +
Sbjct: 103 RKFRGHAGKVNTVQFNEEATVILSGSIDSSVRCWDCRSRKP-EPVQTLDEARDGISSV-- 159
Query: 104 ETSDELVVSGAGDAEVRLFNL 124
+ SD V++G+ D VR ++L
Sbjct: 160 KVSDHEVLAGSVDGRVRRYDL 180
Score = 94 (38.1 bits), Expect = 5.1e-08, Sum P(2) = 5.1e-08
Identities = 24/83 (28%), Positives = 40/83 (48%)
Query: 619 YVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCH 678
Y GH N + K L +R ++ S S+DG+ F W+ G L+ L +VV + H
Sbjct: 229 YTGHKN--QEYKLDCCLSERDTHVVSCSEDGKVFFWDLVEGVLVLALPVGPSVVQSLAYH 286
Query: 679 PFD-CVVATSGIDNTIKIWTPSA 700
P + C++ G +++ W A
Sbjct: 287 PTEPCLLTAMG--GSVQCWREEA 307
Score = 71 (30.1 bits), Expect = 4.4e-07, Sum P(3) = 4.4e-07
Identities = 27/89 (30%), Positives = 45/89 (50%)
Query: 40 LSQER--ELEGHQGCVNAISWNSKGSLLIS-GSDDTHINVWSYSSRKLLHSIETGHSANV 96
L Q+R L+ QG V A+ +N G+ ++ GSD T + +W+ LL + +GH V
Sbjct: 13 LPQKRLKTLDCGQGAVRAVRFNVDGNYCLTCGSDKT-LKLWNPLRGTLLRTY-SGHGYEV 70
Query: 97 FCTKFVPETSDELVVSGAGDAEVRLFNLS 125
+ S + SG GD V L++++
Sbjct: 71 LDAAGSFDNSS--LCSGGGDKAVVLWDVA 97
Score = 67 (28.6 bits), Expect = 4.4e-07, Sum P(3) = 4.4e-07
Identities = 29/93 (31%), Positives = 40/93 (43%)
Query: 162 VVWSASEDGTLRQHDFRQGSSCPPAGSSHQECRNIL---LD--LRCGAKRSLADPPKQTL 216
V+W + +R+ FR + ++E IL +D +RC RS P QTL
Sbjct: 92 VLWDVASGQVVRK--FRGHAGKVNTVQFNEEATVILSGSIDSSVRCWDCRSRKPEPVQTL 149
Query: 217 SLKSCDISSTR--PHLLLVGGSDAFARLYDRRM 247
ISS + H +L G D R YD RM
Sbjct: 150 DEARDGISSVKVSDHEVLAGSVDGRVRRYDLRM 182
>ZFIN|ZDB-GENE-040116-3 [details] [associations]
symbol:pafah1b1b "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit b" species:7955 "Danio
rerio" [GO:0040023 "establishment of nucleus localization"
evidence=IMP] [GO:0045494 "photoreceptor cell maintenance"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=IMP] [GO:0048854 "brain morphogenesis" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006810 "transport"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-3
GO:GO:0005737 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005815 GO:GO:0045494 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 GO:GO:0040023 GO:GO:0048854
GO:GO:0045176 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:DQ141216 EMBL:BC044530 IPI:IPI00500561 RefSeq:NP_958503.1
UniGene:Dr.79815 ProteinModelPortal:Q803D2 SMR:Q803D2 STRING:Q803D2
PRIDE:Q803D2 Ensembl:ENSDART00000031470 GeneID:394247
KEGG:dre:394247 CTD:394247 InParanoid:Q07DR2 NextBio:20815156
Bgee:Q803D2 Uniprot:Q803D2
Length = 410
Score = 114 (45.2 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 38/156 (24%), Positives = 71/156 (45%)
Query: 37 VRRLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANV 96
+ R ++ L GH+ V + ++ SL++S S+D I VW Y + +++ GH+ +V
Sbjct: 95 IPRPPEKYALSGHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLK-GHTDSV 153
Query: 97 FCTKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVE 156
F + + +L+ S + D ++L++ F I H V +A+
Sbjct: 154 QDISF--DQTGKLLASCSADMTIKLWDFQGFE-------CIRTM---HGHDHNVSSVAIM 201
Query: 157 VGNPHVVWSASEDGTLRQHDFRQGSSCPPAGSSHQE 192
H+V SAS D T++ + G C + H+E
Sbjct: 202 PNGDHIV-SASRDKTMKMWEVATGY-CVKTFTGHRE 235
Score = 90 (36.7 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 18/58 (31%), Positives = 28/58 (48%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW 696
G ++ S +DD IW+ + R +K L E V + H V T +D T+K+W
Sbjct: 350 GRFVVSCADDKTLRIWDYKNKRCMKTLSAHEHFVTSLDFHKASPYVVTGSVDQTVKVW 407
Score = 89 (36.4 bits), Expect = 7.2e-08, Sum P(2) = 7.2e-08
Identities = 20/61 (32%), Positives = 31/61 (50%)
Query: 636 GQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKI 695
G+ G ++ SGS D +W+ TG + L+G + V V HP V + D T++I
Sbjct: 305 GKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHPGGRFVVSCADDKTLRI 364
Query: 696 W 696
W
Sbjct: 365 W 365
>RGD|1306947 [details] [associations]
symbol:Wdr83 "WD repeat domain 83" species:10116 "Rattus
norvegicus" [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=IEA;ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0005681 "spliceosomal complex"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1306947 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0071013
GO:GO:0000375 CTD:84292 HOVERGEN:HBG105288 KO:K13124
OrthoDB:EOG4ZCT4V EMBL:AY940050 IPI:IPI00209921
RefSeq:NP_001041312.1 UniGene:Rn.3570 ProteinModelPortal:Q5BLX8
PRIDE:Q5BLX8 GeneID:288924 KEGG:rno:288924 InParanoid:Q5BLX8
NextBio:629000 Genevestigator:Q5BLX8 Uniprot:Q5BLX8
Length = 315
Score = 106 (42.4 bits), Expect = 7.0e-08, Sum P(2) = 7.0e-08
Identities = 24/81 (29%), Positives = 44/81 (54%)
Query: 44 RELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP 103
R+ GH G VN + +N + ++++SGS D+ + W SRK ++T A +
Sbjct: 103 RKFRGHAGKVNTVQFNEEATVILSGSIDSSVRCWDCRSRKP-EPVQTLDEARDGISSV-- 159
Query: 104 ETSDELVVSGAGDAEVRLFNL 124
+ SD +++G+ D VR ++L
Sbjct: 160 KVSDHEILAGSVDGRVRRYDL 180
Score = 94 (38.1 bits), Expect = 7.0e-08, Sum P(2) = 7.0e-08
Identities = 26/79 (32%), Positives = 37/79 (46%)
Query: 619 YVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCH 678
YVGH N K L +R ++ S S+DG+ F W+ G L L VV + H
Sbjct: 229 YVGHKN--QKYKLDCCLSERDTHVVSCSEDGKVFFWDLVEGSLALALPVGSNVVQSLAYH 286
Query: 679 PFD-CVVATSGIDNTIKIW 696
P D C++ G +I+ W
Sbjct: 287 PADPCLLTAMG--GSIQYW 303
Score = 71 (30.1 bits), Expect = 4.6e-07, Sum P(3) = 4.6e-07
Identities = 25/85 (29%), Positives = 43/85 (50%)
Query: 42 QERELEGHQGCVNAISWNSKGSLLIS-GSDDTHINVWSYSSRKLLHSIETGHSANVFCTK 100
Q + L+ QG V A+ +N G+ ++ GSD T + +W+ LL + +GH V
Sbjct: 17 QLKTLDCGQGAVRAVRFNVDGNYCLTCGSDKT-LKLWNPLRGTLLRTY-SGHGYEVLDAA 74
Query: 101 FVPETSDELVVSGAGDAEVRLFNLS 125
+ S + SG GD V L++++
Sbjct: 75 GSFDNSH--LCSGGGDKTVVLWDVA 97
Score = 67 (28.6 bits), Expect = 4.6e-07, Sum P(3) = 4.6e-07
Identities = 29/93 (31%), Positives = 40/93 (43%)
Query: 162 VVWSASEDGTLRQHDFRQGSSCPPAGSSHQECRNIL---LD--LRCGAKRSLADPPKQTL 216
V+W + +R+ FR + ++E IL +D +RC RS P QTL
Sbjct: 92 VLWDVATGQVVRK--FRGHAGKVNTVQFNEEATVILSGSIDSSVRCWDCRSRKPEPVQTL 149
Query: 217 SLKSCDISSTR--PHLLLVGGSDAFARLYDRRM 247
ISS + H +L G D R YD RM
Sbjct: 150 DEARDGISSVKVSDHEILAGSVDGRVRRYDLRM 182
>UNIPROTKB|F1P0F4 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00821846
Ensembl:ENSGALT00000040449 ArrayExpress:F1P0F4 Uniprot:F1P0F4
Length = 661
Score = 125 (49.1 bits), Expect = 7.0e-05, Sum P(2) = 7.0e-05
Identities = 40/137 (29%), Positives = 69/137 (50%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L GH + ++ ++K L+++GS I VW + K+L ++ GH AN+ F P
Sbjct: 59 LTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTL-LGHKANICSLDFHPYG 117
Query: 106 SDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHVVW- 164
S V SG+ D +++L+++ R +G I Y+ HT+ V+ L +P W
Sbjct: 118 S--FVASGSLDTDIKLWDVRR---KG----CIFK---YKSHTQAVRCLRF---SPDGKWL 162
Query: 165 -SASEDGTLRQHDFRQG 180
SA++D T++ D G
Sbjct: 163 ASAADDHTVKLWDLTAG 179
Score = 107 (42.7 bits), Expect = 7.0e-08, Sum P(2) = 7.0e-08
Identities = 26/95 (27%), Positives = 53/95 (55%)
Query: 32 MHSSLVRRLSQE-RELEGHQGCVNA-ISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIE 89
M +++V + + + +E+ H V++ + S G LL +G DD +NVWS + + S+
Sbjct: 1 MAAAVVTKTAWKLQEIVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSL- 59
Query: 90 TGHSANVFCTKFVPETSDELVVSGAGDAEVRLFNL 124
TGH+ + + +EL+V+G+ +R+++L
Sbjct: 60 TGHTTPIESLQI--SAKEELIVAGSQSGSIRVWDL 92
Score = 102 (41.0 bits), Expect = 7.0e-08, Sum P(2) = 7.0e-08
Identities = 34/124 (27%), Positives = 60/124 (48%)
Query: 639 GDYIASGSDDGRWFIWE-KQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIWT 697
G ++ASGS D +W+ ++ G + K +AV C++ P +A++ D+T+K+W
Sbjct: 117 GSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAV-RCLRFSPDGKWLASAADDHTVKLWD 175
Query: 698 PSASVPSIVSGGAAGPDTADVLEAMESNQRKL-SRNREHSLSYELLERFHMHEFSEGSLR 756
+A G GP +V+E S + L S + ++ + LE+FH+ E
Sbjct: 176 LTAGKVMFEFTGHYGP--VNVVEFHPSIEYLLASGSSSMTIRFWDLEKFHVVSCIEEEAT 233
Query: 757 PFEC 760
P C
Sbjct: 234 PVRC 237
Score = 54 (24.1 bits), Expect = 7.0e-05, Sum P(2) = 7.0e-05
Identities = 13/67 (19%), Positives = 29/67 (43%)
Query: 642 IASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKI--WTPS 699
+ASGS W+ + ++ + + V C+ +P C + G +++++ W P
Sbjct: 205 LASGSSSMTIRFWDLEKFHVVSCIEEEATPVRCILFNPDGCCLY-GGFQDSLRVYGWEPE 263
Query: 700 ASVPSIV 706
+V
Sbjct: 264 RCFDVVV 270
>UNIPROTKB|E3W9A3 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0000922
"spindle pole" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IEA]
[GO:0008568 "microtubule-severing ATPase activity" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0031117 "positive regulation
of microtubule depolymerization" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005886 GO:GO:0005813
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0008352
PANTHER:PTHR19845 IPI:IPI00822740 OMA:NAISRTP GO:GO:0031117
EMBL:AADN02065753 EMBL:AADN02065752 ProteinModelPortal:E3W9A3
Ensembl:ENSGALT00000040450 ArrayExpress:E3W9A3 Uniprot:E3W9A3
Length = 661
Score = 125 (49.1 bits), Expect = 0.00034, P = 0.00034
Identities = 40/137 (29%), Positives = 69/137 (50%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L GH + ++ ++K L+++GS I VW + K+L ++ GH AN+ F P
Sbjct: 59 LTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTL-LGHKANICSLDFHPYG 117
Query: 106 SDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHVVW- 164
S V SG+ D +++L+++ R +G I Y+ HT+ V+ L +P W
Sbjct: 118 S--FVASGSLDTDIKLWDVRR---KG----CIFK---YKSHTQAVRCLRF---SPDGKWL 162
Query: 165 -SASEDGTLRQHDFRQG 180
SA++D T++ D G
Sbjct: 163 ASAADDHTVKLWDLTAG 179
Score = 107 (42.7 bits), Expect = 7.0e-08, Sum P(2) = 7.0e-08
Identities = 26/95 (27%), Positives = 53/95 (55%)
Query: 32 MHSSLVRRLSQE-RELEGHQGCVNA-ISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIE 89
M +++V + + + +E+ H V++ + S G LL +G DD +NVWS + + S+
Sbjct: 1 MAAAVVTKTAWKLQEIVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSL- 59
Query: 90 TGHSANVFCTKFVPETSDELVVSGAGDAEVRLFNL 124
TGH+ + + +EL+V+G+ +R+++L
Sbjct: 60 TGHTTPIESLQI--SAKEELIVAGSQSGSIRVWDL 92
Score = 102 (41.0 bits), Expect = 7.0e-08, Sum P(2) = 7.0e-08
Identities = 33/124 (26%), Positives = 61/124 (49%)
Query: 639 GDYIASGSDDGRWFIWE-KQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIWT 697
G ++ASGS D +W+ ++ G + K +AV C++ P +A++ D+T+K+W
Sbjct: 117 GSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAV-RCLRFSPDGKWLASAADDHTVKLWD 175
Query: 698 PSASVPSIVSGGAAGPDTADVLEAMESNQRKLSRNREH-SLSYELLERFHMHEFSEGSLR 756
+A G GP +V+E ++ L+ + H ++ + LE+FH+ E
Sbjct: 176 LTAGKVMFEFTGHYGP--VNVVE-FHPSEYPLAGSPVHRTIRFWDLEKFHVVSCIEEEAT 232
Query: 757 PFEC 760
P C
Sbjct: 233 PVRC 236
>UNIPROTKB|Q2TBP4 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9913 "Bos taurus" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0030030
"cell projection organization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 EMBL:BC109862 IPI:IPI00701787
RefSeq:NP_001033649.1 UniGene:Bt.4084 ProteinModelPortal:Q2TBP4
Ensembl:ENSBTAT00000001927 GeneID:534489 KEGG:bta:534489 CTD:25886
HOVERGEN:HBG057502 InParanoid:Q2TBP4 KO:K16482 OMA:ANHVEFH
OrthoDB:EOG412M5H NextBio:20876416 Uniprot:Q2TBP4
Length = 407
Score = 107 (42.7 bits), Expect = 7.8e-08, Sum P(2) = 7.8e-08
Identities = 36/133 (27%), Positives = 60/133 (45%)
Query: 41 SQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTK 100
S ER +GH+ V ++ ++ L SGS D+ + VW + + GH V C
Sbjct: 10 SLERHFKGHRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKPQTRAYRF-AGHKDAVTCVN 68
Query: 101 FVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNP 160
F P S L+ SG+ D VR++ + G S +++ HT V+ +
Sbjct: 69 FSP--SGHLLASGSRDKTVRIW-VPNVKGE---------STVFRAHTATVRSVHFCSDGQ 116
Query: 161 HVVWSASEDGTLR 173
V +AS+D T++
Sbjct: 117 SFV-TASDDKTVK 128
Score = 105 (42.0 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 25/75 (33%), Positives = 39/75 (52%)
Query: 49 HQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPETSDE 108
H V ++ + S G ++ SDD + VWS +K L S+ H V C KF P+
Sbjct: 102 HTATVRSVHFCSDGQSFVTASDDKTVKVWSTHRQKFLFSLSQ-HINWVRCAKFSPD--GR 158
Query: 109 LVVSGAGDAEVRLFN 123
L+VS + D V+L++
Sbjct: 159 LIVSASDDKTVKLWD 173
Score = 96 (38.9 bits), Expect = 7.8e-08, Sum P(2) = 7.8e-08
Identities = 19/58 (32%), Positives = 28/58 (48%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW 696
G I S SDD +W+K + + V V HP +A +G+DNT+K+W
Sbjct: 157 GRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVW 214
Score = 83 (34.3 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 25/86 (29%), Positives = 43/86 (50%)
Query: 48 GHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANV----FCT---K 100
GH+ V ++++ G LL SGS D + +W + K ++ H+A V FC+
Sbjct: 59 GHKDAVTCVNFSPSGHLLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFCSDGQS 117
Query: 101 FVPETSDELVVSGAGDAEVRLFNLSR 126
FV + D+ V + + LF+LS+
Sbjct: 118 FVTASDDKTVKVWSTHRQKFLFSLSQ 143
Score = 80 (33.2 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 21/74 (28%), Positives = 34/74 (45%)
Query: 622 HCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFD 681
+C G + F G IA+ D +W+ +T RL++ A VN + HP
Sbjct: 183 YCEHGGFVTYVDF-HPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSG 241
Query: 682 CVVATSGIDNTIKI 695
+ T+ D+T+KI
Sbjct: 242 NYLVTASSDSTLKI 255
Score = 61 (26.5 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 20/86 (23%), Positives = 34/86 (39%)
Query: 612 VIDMK-QRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEA 670
V D++ R + H + + A G+Y+ + S D I + GRL+ L G +
Sbjct: 213 VWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQG 272
Query: 671 VVNCVQCHPFDCVVATSGIDNTIKIW 696
V A+ G D + +W
Sbjct: 273 PATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 59 (25.8 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 13/58 (22%), Positives = 24/58 (41%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW 696
G + SDD +W + + L V C + P ++ ++ D T+K+W
Sbjct: 115 GQSFVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLW 172
>UNIPROTKB|A5D7P3 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOVERGEN:HBG006271
OMA:WVRGLAF InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 IPI:IPI00703460 UniGene:Bt.111460 GO:GO:0051081
EMBL:DAAA02048674 EMBL:DAAA02048675 EMBL:DAAA02048676 EMBL:BC140633
SMR:A5D7P3 STRING:A5D7P3 Ensembl:ENSBTAT00000055329 Uniprot:A5D7P3
Length = 410
Score = 115 (45.5 bits), Expect = 9.1e-08, Sum P(2) = 9.1e-08
Identities = 38/156 (24%), Positives = 72/156 (46%)
Query: 37 VRRLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANV 96
+ R ++ L GH+ V + ++ S+++S S+D I VW Y + +++ GH+ +V
Sbjct: 95 IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLK-GHTDSV 153
Query: 97 FCTKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVE 156
F + S +L+ S + D ++L++ F I H V +A+
Sbjct: 154 QDISF--DHSGKLLASCSADMTIKLWDFQGFE-------CIRTM---HGHDHNVSSVAIM 201
Query: 157 VGNPHVVWSASEDGTLRQHDFRQGSSCPPAGSSHQE 192
H+V SAS D T++ + + G C + H+E
Sbjct: 202 PNGDHIV-SASRDKTIKMWEVQTGY-CVKTFTGHRE 235
Score = 87 (35.7 bits), Expect = 9.1e-08, Sum P(2) = 9.1e-08
Identities = 18/58 (31%), Positives = 28/58 (48%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW 696
G +I S +DD +W+ + R +K L E V + H V T +D T+K+W
Sbjct: 350 GKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 81 (33.6 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 19/71 (26%), Positives = 36/71 (50%)
Query: 626 GTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVA 685
G++ K++ G+ G ++ SGS D +W+ TG + L+G + V V H +
Sbjct: 298 GSETKKS---GKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFIL 354
Query: 686 TSGIDNTIKIW 696
+ D T+++W
Sbjct: 355 SCADDKTLRVW 365
Score = 49 (22.3 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 22/75 (29%), Positives = 31/75 (41%)
Query: 637 QRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHP---FDCVVATSGIDNTI 693
Q G IAS S+D +W T L E VV C+ P + + +G + T
Sbjct: 244 QDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSE-TK 302
Query: 694 KIWTPSASVPSIVSG 708
K P P ++SG
Sbjct: 303 KSGKPG---PFLLSG 314
>UNIPROTKB|P43033 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0045502 "dynein
binding" evidence=IDA] [GO:0034452 "dynactin binding" evidence=IDA]
[GO:0046469 "platelet activating factor metabolic process"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0043274
"phospholipase binding" evidence=IDA] [GO:0008201 "heparin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0016042 GO:GO:0006810 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008201
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0008017
GO:GO:0005874 GO:GO:0034452 GO:GO:0045502 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:D30615 IPI:IPI00703460 RefSeq:NP_777088.1 UniGene:Bt.111460
ProteinModelPortal:P43033 SMR:P43033 IntAct:P43033 STRING:P43033
PRIDE:P43033 GeneID:282513 KEGG:bta:282513 CTD:5048
NextBio:20806263 GO:GO:0043274 GO:GO:0046469 Uniprot:P43033
Length = 410
Score = 115 (45.5 bits), Expect = 9.1e-08, Sum P(2) = 9.1e-08
Identities = 38/156 (24%), Positives = 72/156 (46%)
Query: 37 VRRLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANV 96
+ R ++ L GH+ V + ++ S+++S S+D I VW Y + +++ GH+ +V
Sbjct: 95 IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLK-GHTDSV 153
Query: 97 FCTKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVE 156
F + S +L+ S + D ++L++ F I H V +A+
Sbjct: 154 EDISF--DHSGKLLASCSADMTIKLWDFQGFE-------CIRTM---HGHDHNVSSVAIM 201
Query: 157 VGNPHVVWSASEDGTLRQHDFRQGSSCPPAGSSHQE 192
H+V SAS D T++ + + G C + H+E
Sbjct: 202 PNGDHIV-SASRDKTIKMWEVQTGY-CVKTFTGHRE 235
Score = 87 (35.7 bits), Expect = 9.1e-08, Sum P(2) = 9.1e-08
Identities = 18/58 (31%), Positives = 28/58 (48%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW 696
G +I S +DD +W+ + R +K L E V + H V T +D T+K+W
Sbjct: 350 GKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 81 (33.6 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 19/71 (26%), Positives = 36/71 (50%)
Query: 626 GTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVA 685
G++ K++ G+ G ++ SGS D +W+ TG + L+G + V V H +
Sbjct: 298 GSETKKS---GKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFIL 354
Query: 686 TSGIDNTIKIW 696
+ D T+++W
Sbjct: 355 SCADDKTLRVW 365
Score = 49 (22.3 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 22/75 (29%), Positives = 31/75 (41%)
Query: 637 QRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHP---FDCVVATSGIDNTI 693
Q G IAS S+D +W T L E VV C+ P + + +G + T
Sbjct: 244 QDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSE-TK 302
Query: 694 KIWTPSASVPSIVSG 708
K P P ++SG
Sbjct: 303 KSGKPG---PFLLSG 314
>UNIPROTKB|E2QY31 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
CTD:5048 EMBL:AAEX03006704 RefSeq:XP_854482.1
ProteinModelPortal:E2QY31 SMR:E2QY31 PRIDE:E2QY31
Ensembl:ENSCAFT00000030661 GeneID:480656 KEGG:cfa:480656
NextBio:20855646 Uniprot:E2QY31
Length = 410
Score = 115 (45.5 bits), Expect = 9.1e-08, Sum P(2) = 9.1e-08
Identities = 38/156 (24%), Positives = 72/156 (46%)
Query: 37 VRRLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANV 96
+ R ++ L GH+ V + ++ S+++S S+D I VW Y + +++ GH+ +V
Sbjct: 95 IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLK-GHTDSV 153
Query: 97 FCTKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVE 156
F + S +L+ S + D ++L++ F I H V +A+
Sbjct: 154 QDISF--DHSGKLLASCSADMTIKLWDFQGFE-------CIRTM---HGHDHNVSSVAIM 201
Query: 157 VGNPHVVWSASEDGTLRQHDFRQGSSCPPAGSSHQE 192
H+V SAS D T++ + + G C + H+E
Sbjct: 202 PNGDHIV-SASRDKTIKMWEVQTGY-CVKTFTGHRE 235
Score = 87 (35.7 bits), Expect = 9.1e-08, Sum P(2) = 9.1e-08
Identities = 18/58 (31%), Positives = 28/58 (48%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW 696
G +I S +DD +W+ + R +K L E V + H V T +D T+K+W
Sbjct: 350 GKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 81 (33.6 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 19/71 (26%), Positives = 36/71 (50%)
Query: 626 GTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVA 685
G++ K++ G+ G ++ SGS D +W+ TG + L+G + V V H +
Sbjct: 298 GSETKKS---GKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFIL 354
Query: 686 TSGIDNTIKIW 696
+ D T+++W
Sbjct: 355 SCADDKTLRVW 365
Score = 49 (22.3 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 22/75 (29%), Positives = 31/75 (41%)
Query: 637 QRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHP---FDCVVATSGIDNTI 693
Q G IAS S+D +W T L E VV C+ P + + +G + T
Sbjct: 244 QDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSE-TK 302
Query: 694 KIWTPSASVPSIVSG 708
K P P ++SG
Sbjct: 303 KSGKPG---PFLLSG 314
>UNIPROTKB|J9P388 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AAEX03006704
Ensembl:ENSCAFT00000046041 Uniprot:J9P388
Length = 410
Score = 115 (45.5 bits), Expect = 9.1e-08, Sum P(2) = 9.1e-08
Identities = 38/156 (24%), Positives = 72/156 (46%)
Query: 37 VRRLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANV 96
+ R ++ L GH+ V + ++ S+++S S+D I VW Y + +++ GH+ +V
Sbjct: 95 IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLK-GHTDSV 153
Query: 97 FCTKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVE 156
F + S +L+ S + D ++L++ F I H V +A+
Sbjct: 154 QDISF--DHSGKLLASCSADMTIKLWDFQGFE-------CIRTM---HGHDHNVSSVAIM 201
Query: 157 VGNPHVVWSASEDGTLRQHDFRQGSSCPPAGSSHQE 192
H+V SAS D T++ + + G C + H+E
Sbjct: 202 PNGDHIV-SASRDKTIKMWEVQTGY-CVKTFTGHRE 235
Score = 87 (35.7 bits), Expect = 9.1e-08, Sum P(2) = 9.1e-08
Identities = 18/58 (31%), Positives = 28/58 (48%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW 696
G +I S +DD +W+ + R +K L E V + H V T +D T+K+W
Sbjct: 350 GKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 81 (33.6 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 19/71 (26%), Positives = 36/71 (50%)
Query: 626 GTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVA 685
G++ K++ G+ G ++ SGS D +W+ TG + L+G + V V H +
Sbjct: 298 GSETKKS---GKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFIL 354
Query: 686 TSGIDNTIKIW 696
+ D T+++W
Sbjct: 355 SCADDKTLRVW 365
Score = 49 (22.3 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 22/75 (29%), Positives = 31/75 (41%)
Query: 637 QRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHP---FDCVVATSGIDNTI 693
Q G IAS S+D +W T L E VV C+ P + + +G + T
Sbjct: 244 QDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSE-TK 302
Query: 694 KIWTPSASVPSIVSG 708
K P P ++SG
Sbjct: 303 KSGKPG---PFLLSG 314
>UNIPROTKB|P43034 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0016042 "lipid
catabolic process" evidence=IEA] [GO:0001667 "ameboidal cell
migration" evidence=IEA] [GO:0001961 "positive regulation of
cytokine-mediated signaling pathway" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0007097 "nuclear migration"
evidence=IEA] [GO:0009306 "protein secretion" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031982 "vesicle"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0033267 "axon part" evidence=IEA] [GO:0036035 "osteoclast
development" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0045505 "dynein intermediate chain binding"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0001764 "neuron migration" evidence=ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000132
"establishment of mitotic spindle orientation" evidence=IMP]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0045502 "dynein binding"
evidence=IDA] [GO:0007017 "microtubule-based process" evidence=IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0000235 "astral microtubule"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0005813 "centrosome"
evidence=ISS;IDA] [GO:0000086 "G2/M transition of mitotic cell
cycle" evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=ISS;TAS] [GO:0048854 "brain morphogenesis"
evidence=IMP] [GO:0008201 "heparin binding" evidence=ISS]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0021540
"corpus callosum morphogenesis" evidence=IMP] [GO:0021987 "cerebral
cortex development" evidence=IMP] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] [GO:0000226 "microtubule
cytoskeleton organization" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007405 "neuroblast proliferation"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0008090 "retrograde axon cargo transport" evidence=ISS]
[GO:0019226 "transmission of nerve impulse" evidence=ISS]
[GO:0030036 "actin cytoskeleton organization" evidence=ISS]
[GO:0032319 "regulation of Rho GTPase activity" evidence=ISS]
[GO:0047496 "vesicle transport along microtubule" evidence=ISS]
[GO:0043274 "phospholipase binding" evidence=ISS] [GO:0046469
"platelet activating factor metabolic process" evidence=ISS]
[GO:0034452 "dynactin binding" evidence=ISS] [GO:0001675 "acrosome
assembly" evidence=ISS] [GO:0007611 "learning or memory"
evidence=ISS] [GO:0021766 "hippocampus development" evidence=ISS]
[GO:0021819 "layer formation in cerebral cortex" evidence=ISS]
[GO:0031252 "cell leading edge" evidence=ISS] [GO:0031512 "motile
primary cilium" evidence=ISS] [GO:0031513 "nonmotile primary
cilium" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051219 "phosphoprotein binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
EMBL:CH471108 Orphanet:217385 Pathway_Interaction_DB:lis1pathway
Reactome:REACT_115566 GO:GO:0033267 GO:GO:0005871 GO:GO:0000086
GO:GO:0042803 GO:GO:0031252 Reactome:REACT_21300 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0008201 GO:GO:0030426 GO:GO:0007611 GO:GO:0007405
GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773
GO:GO:0001675 GO:GO:0008017 Pathway_Interaction_DB:reelinpathway
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0051219 GO:GO:0000236 GO:GO:0048854 GO:GO:0034452
GO:GO:0021540 GO:GO:0045502 GO:GO:0021819 GO:GO:0047496
GO:GO:0010977 GO:GO:0017145 GO:GO:0031512 GO:GO:0021895
Orphanet:531 HOGENOM:HOG000184015 HOVERGEN:HBG006271 KO:K01062
OMA:WVRGLAF OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0043274
GO:GO:0046469 GO:GO:0051081 EMBL:L13385 EMBL:L13386 EMBL:L13387
EMBL:U72342 EMBL:U72334 EMBL:U72335 EMBL:U72336 EMBL:U72337
EMBL:U72338 EMBL:U72339 EMBL:U72340 EMBL:U72341 EMBL:AF208837
EMBL:AF208838 EMBL:AF400434 EMBL:AK313078 EMBL:BX538346
EMBL:BC064638 IPI:IPI00218728 IPI:IPI00760905 PIR:S36113
RefSeq:NP_000421.1 UniGene:Hs.77318 ProteinModelPortal:P43034
SMR:P43034 DIP:DIP-35691N IntAct:P43034 MINT:MINT-5004233
STRING:P43034 PhosphoSite:P43034 DMDM:1170794 PaxDb:P43034
PeptideAtlas:P43034 PRIDE:P43034 Ensembl:ENST00000397195
GeneID:5048 KEGG:hsa:5048 UCSC:uc002fuw.4 GeneCards:GC17P002496
HGNC:HGNC:8574 HPA:CAB004489 HPA:HPA020036 MIM:247200 MIM:601545
MIM:607432 neXtProt:NX_P43034 Orphanet:95232 PharmGKB:PA32905
InParanoid:P43034 PhylomeDB:P43034 ChiTaRS:PAFAH1B1 GenomeRNAi:5048
NextBio:19452 ArrayExpress:P43034 Bgee:P43034 CleanEx:HS_PAFAH1B1
Genevestigator:P43034 GermOnline:ENSG00000007168 GO:GO:0051660
Uniprot:P43034
Length = 410
Score = 115 (45.5 bits), Expect = 9.1e-08, Sum P(2) = 9.1e-08
Identities = 38/156 (24%), Positives = 72/156 (46%)
Query: 37 VRRLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANV 96
+ R ++ L GH+ V + ++ S+++S S+D I VW Y + +++ GH+ +V
Sbjct: 95 IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLK-GHTDSV 153
Query: 97 FCTKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVE 156
F + S +L+ S + D ++L++ F I H V +A+
Sbjct: 154 QDISF--DHSGKLLASCSADMTIKLWDFQGFE-------CIRTM---HGHDHNVSSVAIM 201
Query: 157 VGNPHVVWSASEDGTLRQHDFRQGSSCPPAGSSHQE 192
H+V SAS D T++ + + G C + H+E
Sbjct: 202 PNGDHIV-SASRDKTIKMWEVQTGY-CVKTFTGHRE 235
Score = 87 (35.7 bits), Expect = 9.1e-08, Sum P(2) = 9.1e-08
Identities = 18/58 (31%), Positives = 28/58 (48%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW 696
G +I S +DD +W+ + R +K L E V + H V T +D T+K+W
Sbjct: 350 GKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 81 (33.6 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 19/71 (26%), Positives = 36/71 (50%)
Query: 626 GTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVA 685
G++ K++ G+ G ++ SGS D +W+ TG + L+G + V V H +
Sbjct: 298 GSETKKS---GKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFIL 354
Query: 686 TSGIDNTIKIW 696
+ D T+++W
Sbjct: 355 SCADDKTLRVW 365
Score = 49 (22.3 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 22/75 (29%), Positives = 31/75 (41%)
Query: 637 QRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHP---FDCVVATSGIDNTI 693
Q G IAS S+D +W T L E VV C+ P + + +G + T
Sbjct: 244 QDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSE-TK 302
Query: 694 KIWTPSASVPSIVSG 708
K P P ++SG
Sbjct: 303 KSGKPG---PFLLSG 314
>UNIPROTKB|F2Z521 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
GO:GO:0051081 EMBL:CU469125 ProteinModelPortal:F2Z521 SMR:F2Z521
PRIDE:F2Z521 Ensembl:ENSSSCT00000019411 Uniprot:F2Z521
Length = 410
Score = 115 (45.5 bits), Expect = 9.1e-08, Sum P(2) = 9.1e-08
Identities = 38/156 (24%), Positives = 72/156 (46%)
Query: 37 VRRLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANV 96
+ R ++ L GH+ V + ++ S+++S S+D I VW Y + +++ GH+ +V
Sbjct: 95 IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLK-GHTDSV 153
Query: 97 FCTKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVE 156
F + S +L+ S + D ++L++ F I H V +A+
Sbjct: 154 QDISF--DHSGKLLASCSADMTIKLWDFQGFE-------CIRTM---HGHDHNVSSVAIM 201
Query: 157 VGNPHVVWSASEDGTLRQHDFRQGSSCPPAGSSHQE 192
H+V SAS D T++ + + G C + H+E
Sbjct: 202 PNGDHIV-SASRDKTIKMWEVQTGY-CVKTFTGHRE 235
Score = 87 (35.7 bits), Expect = 9.1e-08, Sum P(2) = 9.1e-08
Identities = 18/58 (31%), Positives = 28/58 (48%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW 696
G +I S +DD +W+ + R +K L E V + H V T +D T+K+W
Sbjct: 350 GKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 81 (33.6 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 19/71 (26%), Positives = 36/71 (50%)
Query: 626 GTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVA 685
G++ K++ G+ G ++ SGS D +W+ TG + L+G + V V H +
Sbjct: 298 GSETKKS---GKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFIL 354
Query: 686 TSGIDNTIKIW 696
+ D T+++W
Sbjct: 355 SCADDKTLRVW 365
Score = 49 (22.3 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 22/75 (29%), Positives = 31/75 (41%)
Query: 637 QRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHP---FDCVVATSGIDNTI 693
Q G IAS S+D +W T L E VV C+ P + + +G + T
Sbjct: 244 QDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSE-TK 302
Query: 694 KIWTPSASVPSIVSG 708
K P P ++SG
Sbjct: 303 KSGKPG---PFLLSG 314
>MGI|MGI:109520 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10090 "Mus musculus" [GO:0000132
"establishment of mitotic spindle orientation" evidence=ISO]
[GO:0000226 "microtubule cytoskeleton organization"
evidence=IGI;IMP] [GO:0000235 "astral microtubule" evidence=ISO]
[GO:0000776 "kinetochore" evidence=ISO] [GO:0001667 "ameboidal cell
migration" evidence=IMP] [GO:0001675 "acrosome assembly"
evidence=IMP] [GO:0001764 "neuron migration" evidence=ISO;IGI;IMP]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005871 "kinesin
complex" evidence=ISO] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005875 "microtubule associated complex" evidence=ISO;IDA]
[GO:0005938 "cell cortex" evidence=ISO] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007017 "microtubule-based process" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=ISO]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0007611 "learning or memory"
evidence=IMP] [GO:0008017 "microtubule binding" evidence=ISO;IDA]
[GO:0008090 "retrograde axon cargo transport" evidence=IDA]
[GO:0008344 "adult locomotory behavior" evidence=ISO;IMP]
[GO:0009306 "protein secretion" evidence=IMP] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016042 "lipid catabolic process"
evidence=IEA] [GO:0016477 "cell migration" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017145 "stem
cell division" evidence=ISO] [GO:0019226 "transmission of nerve
impulse" evidence=IMP] [GO:0021540 "corpus callosum morphogenesis"
evidence=ISO] [GO:0021766 "hippocampus development"
evidence=IGI;IMP] [GO:0021819 "layer formation in cerebral cortex"
evidence=IGI] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=ISO] [GO:0021987 "cerebral cortex development"
evidence=ISO;IGI;IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=ISO] [GO:0031023 "microtubule
organizing center organization" evidence=ISO] [GO:0031252 "cell
leading edge" evidence=IDA] [GO:0031512 "motile primary cilium"
evidence=IDA] [GO:0031513 "nonmotile primary cilium" evidence=IDA]
[GO:0031982 "vesicle" evidence=ISO] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IMP] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033267 "axon part" evidence=ISO]
[GO:0036035 "osteoclast development" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0043005
"neuron projection" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=ISO]
[GO:0045773 "positive regulation of axon extension" evidence=ISO]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISO] [GO:0046329 "negative regulation of JNK cascade"
evidence=IGI] [GO:0047496 "vesicle transport along microtubule"
evidence=IGI] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0048854 "brain morphogenesis" evidence=ISO]
[GO:0050885 "neuromuscular process controlling balance"
evidence=ISO;IMP] [GO:0051081 "nuclear envelope disassembly"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:109520
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0005875 GO:GO:0033267 GO:GO:0005871 GO:GO:0000226
GO:GO:0000776 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344
GO:GO:0050885 GO:GO:0009306 GO:GO:0030426 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045773 GO:GO:0001675 GO:GO:0046329 GO:GO:0008017
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0048854 GO:GO:0021540 GO:GO:0001667 GO:GO:0021819
GO:GO:0047496 GO:GO:0036035 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 GO:GO:0001961 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081 ChiTaRS:PAFAH1B1
GO:GO:0051660 EMBL:U95116 EMBL:U95120 EMBL:U95119 EMBL:L25109
EMBL:AY189217 EMBL:AY189218 EMBL:BC014831 EMBL:BC026141
IPI:IPI00227864 IPI:IPI00309207 RefSeq:NP_038653.1
UniGene:Mm.397111 PDB:1UUJ PDB:1VYH PDBsum:1UUJ PDBsum:1VYH
ProteinModelPortal:P63005 SMR:P63005 DIP:DIP-29555N IntAct:P63005
STRING:P63005 PhosphoSite:P63005 REPRODUCTION-2DPAGE:P63005
PaxDb:P63005 PRIDE:P63005 Ensembl:ENSMUST00000021091
Ensembl:ENSMUST00000102520 GeneID:18472 KEGG:mmu:18472
InParanoid:P63005 EvolutionaryTrace:P63005 NextBio:294162
Bgee:P63005 Genevestigator:P63005 GermOnline:ENSMUSG00000020745
Uniprot:P63005
Length = 410
Score = 115 (45.5 bits), Expect = 9.1e-08, Sum P(2) = 9.1e-08
Identities = 38/156 (24%), Positives = 72/156 (46%)
Query: 37 VRRLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANV 96
+ R ++ L GH+ V + ++ S+++S S+D I VW Y + +++ GH+ +V
Sbjct: 95 IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLK-GHTDSV 153
Query: 97 FCTKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVE 156
F + S +L+ S + D ++L++ F I H V +A+
Sbjct: 154 QDISF--DHSGKLLASCSADMTIKLWDFQGFE-------CIRTM---HGHDHNVSSVAIM 201
Query: 157 VGNPHVVWSASEDGTLRQHDFRQGSSCPPAGSSHQE 192
H+V SAS D T++ + + G C + H+E
Sbjct: 202 PNGDHIV-SASRDKTIKMWEVQTGY-CVKTFTGHRE 235
Score = 87 (35.7 bits), Expect = 9.1e-08, Sum P(2) = 9.1e-08
Identities = 18/58 (31%), Positives = 28/58 (48%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW 696
G +I S +DD +W+ + R +K L E V + H V T +D T+K+W
Sbjct: 350 GKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 81 (33.6 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 19/71 (26%), Positives = 36/71 (50%)
Query: 626 GTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVA 685
G++ K++ G+ G ++ SGS D +W+ TG + L+G + V V H +
Sbjct: 298 GSETKKS---GKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFIL 354
Query: 686 TSGIDNTIKIW 696
+ D T+++W
Sbjct: 355 SCADDKTLRVW 365
Score = 49 (22.3 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 22/75 (29%), Positives = 31/75 (41%)
Query: 637 QRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHP---FDCVVATSGIDNTI 693
Q G IAS S+D +W T L E VV C+ P + + +G + T
Sbjct: 244 QDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSE-TK 302
Query: 694 KIWTPSASVPSIVSG 708
K P P ++SG
Sbjct: 303 KSGKPG---PFLLSG 314
>RGD|620331 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10116 "Rattus norvegicus"
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA;ISO] [GO:0000226 "microtubule cytoskeleton
organization" evidence=ISO] [GO:0000235 "astral microtubule"
evidence=IEA;ISO] [GO:0000776 "kinetochore" evidence=IEA;ISO]
[GO:0001667 "ameboidal cell migration" evidence=IEA;ISO]
[GO:0001675 "acrosome assembly" evidence=IEA;ISO] [GO:0001764
"neuron migration" evidence=ISO;IMP] [GO:0001961 "positive
regulation of cytokine-mediated signaling pathway"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005635 "nuclear envelope"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005871 "kinesin complex" evidence=IDA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005938 "cell cortex"
evidence=IEA;ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007017
"microtubule-based process" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IEA;ISO] [GO:0007405
"neuroblast proliferation" evidence=IEA;ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0007611 "learning or memory"
evidence=IEA;ISO] [GO:0008017 "microtubule binding"
evidence=IEA;ISO] [GO:0008090 "retrograde axon cargo transport"
evidence=IEA;ISO] [GO:0008344 "adult locomotory behavior"
evidence=IEA;ISO] [GO:0009306 "protein secretion" evidence=IEA;ISO]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IMP] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0016042 "lipid catabolic process" evidence=IEA] [GO:0016477
"cell migration" evidence=ISO] [GO:0017145 "stem cell division"
evidence=IMP] [GO:0019226 "transmission of nerve impulse"
evidence=ISO] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA;ISO] [GO:0021766 "hippocampus development"
evidence=IEA;ISO] [GO:0021819 "layer formation in cerebral cortex"
evidence=IEA;ISO] [GO:0021895 "cerebral cortex neuron
differentiation" evidence=IMP] [GO:0021987 "cerebral cortex
development" evidence=ISO] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA;ISO] [GO:0031252 "cell leading edge"
evidence=IEA;ISO] [GO:0031512 "motile primary cilium"
evidence=IEA;ISO] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IPI] [GO:0033267 "axon part" evidence=IDA]
[GO:0036035 "osteoclast development" evidence=IEA;ISO] [GO:0042803
"protein homodimerization activity" evidence=IEA;ISO] [GO:0043005
"neuron projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=IDA]
[GO:0045773 "positive regulation of axon extension" evidence=IMP]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IMP] [GO:0046329 "negative regulation of JNK cascade"
evidence=IEA;ISO] [GO:0047179 "platelet-activating factor
acetyltransferase activity" evidence=TAS] [GO:0047496 "vesicle
transport along microtubule" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA;ISO] [GO:0048854
"brain morphogenesis" evidence=IEA;ISO] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA;ISO] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA;ISO] [GO:0051219 "phosphoprotein
binding" evidence=IEA;ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IMP] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0031513 "nonmotile primary cilium" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620331
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 115 (45.5 bits), Expect = 9.1e-08, Sum P(2) = 9.1e-08
Identities = 38/156 (24%), Positives = 72/156 (46%)
Query: 37 VRRLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANV 96
+ R ++ L GH+ V + ++ S+++S S+D I VW Y + +++ GH+ +V
Sbjct: 95 IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLK-GHTDSV 153
Query: 97 FCTKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVE 156
F + S +L+ S + D ++L++ F I H V +A+
Sbjct: 154 QDISF--DHSGKLLASCSADMTIKLWDFQGFE-------CIRTM---HGHDHNVSSVAIM 201
Query: 157 VGNPHVVWSASEDGTLRQHDFRQGSSCPPAGSSHQE 192
H+V SAS D T++ + + G C + H+E
Sbjct: 202 PNGDHIV-SASRDKTIKMWEVQTGY-CVKTFTGHRE 235
Score = 87 (35.7 bits), Expect = 9.1e-08, Sum P(2) = 9.1e-08
Identities = 18/58 (31%), Positives = 28/58 (48%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW 696
G +I S +DD +W+ + R +K L E V + H V T +D T+K+W
Sbjct: 350 GKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 81 (33.6 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 19/71 (26%), Positives = 36/71 (50%)
Query: 626 GTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVA 685
G++ K++ G+ G ++ SGS D +W+ TG + L+G + V V H +
Sbjct: 298 GSETKKS---GKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFIL 354
Query: 686 TSGIDNTIKIW 696
+ D T+++W
Sbjct: 355 SCADDKTLRVW 365
Score = 49 (22.3 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 22/75 (29%), Positives = 31/75 (41%)
Query: 637 QRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHP---FDCVVATSGIDNTI 693
Q G IAS S+D +W T L E VV C+ P + + +G + T
Sbjct: 244 QDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSE-TK 302
Query: 694 KIWTPSASVPSIVSG 708
K P P ++SG
Sbjct: 303 KSGKPG---PFLLSG 314
>UNIPROTKB|P63004 [details] [associations]
symbol:Pafah1b1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:10116 "Rattus norvegicus" [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
RGD:620331 GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 115 (45.5 bits), Expect = 9.1e-08, Sum P(2) = 9.1e-08
Identities = 38/156 (24%), Positives = 72/156 (46%)
Query: 37 VRRLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANV 96
+ R ++ L GH+ V + ++ S+++S S+D I VW Y + +++ GH+ +V
Sbjct: 95 IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLK-GHTDSV 153
Query: 97 FCTKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVE 156
F + S +L+ S + D ++L++ F I H V +A+
Sbjct: 154 QDISF--DHSGKLLASCSADMTIKLWDFQGFE-------CIRTM---HGHDHNVSSVAIM 201
Query: 157 VGNPHVVWSASEDGTLRQHDFRQGSSCPPAGSSHQE 192
H+V SAS D T++ + + G C + H+E
Sbjct: 202 PNGDHIV-SASRDKTIKMWEVQTGY-CVKTFTGHRE 235
Score = 87 (35.7 bits), Expect = 9.1e-08, Sum P(2) = 9.1e-08
Identities = 18/58 (31%), Positives = 28/58 (48%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW 696
G +I S +DD +W+ + R +K L E V + H V T +D T+K+W
Sbjct: 350 GKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 81 (33.6 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 19/71 (26%), Positives = 36/71 (50%)
Query: 626 GTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVA 685
G++ K++ G+ G ++ SGS D +W+ TG + L+G + V V H +
Sbjct: 298 GSETKKS---GKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFIL 354
Query: 686 TSGIDNTIKIW 696
+ D T+++W
Sbjct: 355 SCADDKTLRVW 365
Score = 49 (22.3 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 22/75 (29%), Positives = 31/75 (41%)
Query: 637 QRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHP---FDCVVATSGIDNTI 693
Q G IAS S+D +W T L E VV C+ P + + +G + T
Sbjct: 244 QDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSE-TK 302
Query: 694 KIWTPSASVPSIVSG 708
K P P ++SG
Sbjct: 303 KSGKPG---PFLLSG 314
>UNIPROTKB|Q4R8H1 [details] [associations]
symbol:TBL1X "F-box-like/WD repeat-containing protein
TBL1X" species:9541 "Macaca fascicularis" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0003714 "transcription corepressor activity"
evidence=ISS] [GO:0005876 "spindle microtubule" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0007605 "sensory
perception of sound" evidence=ISS] [GO:0008013 "beta-catenin
binding" evidence=ISS] [GO:0017053 "transcriptional repressor
complex" evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0006508 GO:GO:0006351 GO:GO:0000122 GO:GO:0007605
InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393 GO:GO:0008013
GO:GO:0060070 GO:GO:0005876 HSSP:P16649 EMBL:AB168481
ProteinModelPortal:Q4R8H1 Uniprot:Q4R8H1
Length = 569
Score = 145 (56.1 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 40/135 (29%), Positives = 68/135 (50%)
Query: 2 ENFPFHDGSIYDMLDTRHTDTRPDVNHSLQMHSSLVRRLSQEREL---EGHQGCVNAISW 58
+ FPFH D+ D ++ T + + +H V RL +R + +GH VNAI W
Sbjct: 357 QQFPFHSAPALDV-DWQNNMTFASCSTDMCIH---VCRLGCDRPVKTFQGHTNEVNAIKW 412
Query: 59 NSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPE---TSDE----LVV 111
+ G LL S SDD + +WS +H ++ H+ ++ K+ P TS+ ++
Sbjct: 413 DPSGMLLASCSDDMTLKIWSMKQEVCIHDLQA-HNKEIYTIKWSPTGPATSNPNSNIMLA 471
Query: 112 SGAGDAEVRLFNLSR 126
S + D+ VRL+++ R
Sbjct: 472 SASFDSTVRLWDIER 486
Score = 59 (25.8 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 13/29 (44%), Positives = 16/29 (55%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLG 667
G Y+ASGS D IW Q+G L+ G
Sbjct: 509 GRYLASGSFDKCVHIWNTQSGNLVHSYRG 537
Score = 50 (22.7 bits), Expect = 8.6e-07, Sum P(2) = 8.6e-07
Identities = 16/62 (25%), Positives = 26/62 (41%)
Query: 642 IASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW-TPSA 700
+AS S D +W+ + G L + V V P +A+ D + IW T S
Sbjct: 470 LASASFDSTVRLWDIERGVCTHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQSG 529
Query: 701 SV 702
++
Sbjct: 530 NL 531
>TAIR|locus:2158044 [details] [associations]
symbol:AT5G49430 "AT5G49430" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001487
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439
PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297
SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 Gene3D:1.20.920.10
SUPFAM:SSF47370 GO:GO:0080008 KO:K11797 IPI:IPI00523511
RefSeq:NP_199754.2 UniGene:At.51087 ProteinModelPortal:F4K639
PRIDE:F4K639 EnsemblPlants:AT5G49430.1 GeneID:835003
KEGG:ath:AT5G49430 OMA:CCAFNAN Uniprot:F4K639
Length = 1677
Score = 144 (55.7 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 43/153 (28%), Positives = 73/153 (47%)
Query: 34 SSLVRRLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHS 93
SS+V+++ + L GH+ V + G +I+GSDD + VWS + L S GH
Sbjct: 229 SSMVQKMQNIKRLRGHRNAVYCAILDRSGRYVITGSDDRLVKVWSMDTAYCLASCR-GHE 287
Query: 94 ANVFCTKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKL 153
++ T +++ + S + D +R++ L GL P ++ + HT V +
Sbjct: 288 GDI--TDLAVSSNNIFIASASNDCVIRVWRLPD----GL------PVSVLRGHTGAVTAI 335
Query: 154 AVEV--GNPHVVWSASEDGTLRQHDFRQGSSCP 184
A G+P+ + S+S+DGT R D R P
Sbjct: 336 AFSPRPGSPYQLLSSSDDGTCRIWDARGAQFAP 368
Score = 71 (30.1 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 17/64 (26%), Positives = 27/64 (42%)
Query: 641 YIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATS-GIDNTIKIWTPS 699
++ + D R +W G L+ L G A + HPF+ +A S G D +W
Sbjct: 558 FVLAAIMDCRICVWNASDGSLVHSLTGHTASTYVMDVHPFNPRIAMSAGYDGKTIVWDIW 617
Query: 700 ASVP 703
+P
Sbjct: 618 EGIP 621
Score = 40 (19.1 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 7/20 (35%), Positives = 13/20 (65%)
Query: 287 FSPNGEEVLLSYSGEHVYLM 306
FSP+G ++LS +Y++
Sbjct: 637 FSPDGTSIILSDDVGQLYIL 656
>UNIPROTKB|H9L227 [details] [associations]
symbol:PRPF19 "Pre-mRNA-processing factor 19" species:9031
"Gallus gallus" [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0000245 "spliceosomal complex assembly"
evidence=IEA] [GO:0000974 "Prp19 complex" evidence=IEA] [GO:0001833
"inner cell mass cell proliferation" evidence=IEA] [GO:0005811
"lipid particle" evidence=IEA] [GO:0008610 "lipid biosynthetic
process" evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0034450 "ubiquitin-ubiquitin ligase activity" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA] [GO:0045665
"negative regulation of neuron differentiation" evidence=IEA]
[GO:0048026 "positive regulation of mRNA splicing, via spliceosome"
evidence=IEA] [GO:0048711 "positive regulation of astrocyte
differentiation" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR000772
PROSITE:PS50231 GeneTree:ENSGT00700000104487 EMBL:AADN02059449
EMBL:AADN02059450 Ensembl:ENSGALT00000035741 Uniprot:H9L227
Length = 219
Score = 126 (49.4 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 28/82 (34%), Positives = 40/82 (48%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEA--VVNCVQCHPFDCVVATSGIDNTIKIW 696
GDY+ S SDD W + QTGR++ + + + + C Q HP + T +D+ IKIW
Sbjct: 134 GDYLLSSSDDQYWAFSDIQTGRVLTKVTDESSGCALTCAQFHPDGLIFGTGTMDSQIKIW 193
Query: 697 TPSASVPSIVSG--GAAGPDTA 716
+V G GP TA
Sbjct: 194 DLKRGAQGLVGERRGQVGPPTA 215
Score = 61 (26.5 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 21/94 (22%), Positives = 40/94 (42%)
Query: 7 HDGSIYDML--DTRHTDTRPDVNHSLQMHSSLVRRLSQE--RELEGHQGCVNAISWNSKG 62
H SI +L D +DT + + + + S++ L+GH V ++ ++
Sbjct: 33 HSASIPGILALDLCPSDTNKILTGGADKNVIVFDKSSEQILATLKGHSKKVTSVVFHPSQ 92
Query: 63 SLLISGSDDTHINVWSYSSRKLLHSIETGHSANV 96
L+ S S D I +WS + + + H +V
Sbjct: 93 DLVFSASPDATIRIWSVPNASCVQVVRA-HEGSV 125
Score = 43 (20.2 bits), Expect = 8.3e-06, Sum P(2) = 8.3e-06
Identities = 23/103 (22%), Positives = 45/103 (43%)
Query: 92 HSANV---FCTKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTR 148
HSA++ P +++++ GA D V +F+ S + + A + H++
Sbjct: 33 HSASIPGILALDLCPSDTNKILTGGA-DKNVIVFDKS-------SEQIL---ATLKGHSK 81
Query: 149 RVKKLAVEVGNPHVVWSASEDGTLRQHDFRQGSSCPPAGSSHQ 191
+V + +V+SAS D T+R +SC +H+
Sbjct: 82 KVTSVVFHPSQD-LVFSASPDATIRIWSV-PNASCVQVVRAHE 122
>FB|FBgn0039705 [details] [associations]
symbol:Atg16 species:7227 "Drosophila melanogaster"
[GO:0005575 "cellular_component" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0010506 "regulation of
autophagy" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GeneTree:ENSGT00700000104505
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE HSSP:Q04724 UniGene:Dm.20800 GeneID:326115
KEGG:dme:Dmel_CG31033 FlyBase:FBgn0039705 GenomeRNAi:326115
NextBio:847128 EMBL:BT024267 RefSeq:NP_733313.2 SMR:Q86BR6
IntAct:Q86BR6 MINT:MINT-293011 STRING:Q86BR6
EnsemblMetazoa:FBtr0085528 UCSC:CG31033-RC InParanoid:Q86BR6
Uniprot:Q86BR6
Length = 604
Score = 119 (46.9 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 29/102 (28%), Positives = 54/102 (52%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L G +N++ ++S G+ ++ S+D VW+ +L H++ TGHS V K+V E
Sbjct: 358 LSGSSAGINSVDFDSTGAYILGTSNDYGARVWTVMDNRLRHTL-TGHSGKVMAAKYVQEP 416
Query: 106 SDELVVSGAGDAEVRLFNL-------SRFSGRGLDDNAITPS 140
VV+G+ D +++++L ++F+G +D T S
Sbjct: 417 IK--VVTGSHDRTLKIWDLRSIACIETKFAGSSCNDLVTTDS 456
Score = 86 (35.3 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 26/78 (33%), Positives = 36/78 (46%)
Query: 622 HCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFD 681
H + D +ASF G IA GS DG +IW G L L G VN V P +
Sbjct: 529 HFKISCDFARASF-NSSGLKIACGSADGAIYIWNVN-GFLEATLKGHSTAVNAVSWSPNN 586
Query: 682 CVVATSGIDNTIKIWTPS 699
++A+ G + I++ S
Sbjct: 587 NMLASVGKNKRCTIYSES 604
>UNIPROTKB|F1NYZ8 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000118 "histone deacetylase complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0008013 "beta-catenin
binding" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0044212 "transcription regulatory region
DNA binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0047485 "protein N-terminus binding" evidence=IEA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 InterPro:IPR011047 SUPFAM:SSF50998
InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070 GO:GO:0005876
GO:GO:0000118 GeneTree:ENSGT00690000102024 EMBL:AADN02020878
EMBL:AADN02020879 EMBL:AADN02020880 EMBL:AADN02020881
EMBL:AADN02020882 EMBL:AADN02020883 EMBL:AADN02020884
EMBL:AADN02020885 EMBL:AADN02020886 EMBL:AADN02020887
EMBL:AADN02020888 EMBL:AADN02020889 EMBL:AADN02020890
EMBL:AADN02020891 EMBL:AADN02020892 EMBL:AADN02020893
EMBL:AADN02020894 EMBL:AADN02020895 EMBL:AADN02020896
EMBL:AADN02020897 EMBL:AADN02020898 IPI:IPI00594570
Ensembl:ENSGALT00000001912 ArrayExpress:F1NYZ8 Uniprot:F1NYZ8
Length = 517
Score = 140 (54.3 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 32/105 (30%), Positives = 54/105 (51%)
Query: 2 ENFPFHDGSIYDMLDTRHTDTRPDVNHSLQMHSSLVRRLSQEREL---EGHQGCVNAISW 58
+ FPFH D+ D + +T + + +H V +L Q+R + +GH VNAI W
Sbjct: 302 QQFPFHSAPALDV-DWQSNNTFASCSTDMCIH---VCKLGQDRPIKTFQGHTNEVNAIKW 357
Query: 59 NSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP 103
+ G+LL S SDD + +WS +H ++ H+ ++ K+ P
Sbjct: 358 DPTGNLLASCSDDMTLKIWSMKQDSCVHDLQA-HNKEIYTIKWSP 401
Score = 62 (26.9 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 14/29 (48%), Positives = 16/29 (55%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLG 667
G Y+ASGS D IW QTG L+ G
Sbjct: 457 GRYLASGSFDKCVHIWNTQTGALVHSYRG 485
Score = 47 (21.6 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 14/53 (26%), Positives = 20/53 (37%)
Query: 644 SGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW 696
S S D +W+ G I L + V V P +A+ D + IW
Sbjct: 420 SASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIW 472
>UNIPROTKB|Q0VCN2 [details] [associations]
symbol:MORG1 "Mitogen-activated protein kinase organizer 1"
species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=IEA] [GO:0016301 "kinase
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016301 GO:GO:0071013 GO:GO:0000375
GeneTree:ENSGT00700000104496 HOGENOM:HOG000091642 CTD:84292
HOVERGEN:HBG105288 KO:K13124 OrthoDB:EOG4ZCT4V OMA:CKQGAVR
EMBL:DAAA02019387 EMBL:DAAA02019388 EMBL:BC120088 IPI:IPI00687810
RefSeq:NP_001073118.1 UniGene:Bt.64656 Ensembl:ENSBTAT00000008196
GeneID:780845 KEGG:bta:780845 InParanoid:Q0VCN2 NextBio:20924512
Uniprot:Q0VCN2
Length = 315
Score = 107 (42.7 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 26/81 (32%), Positives = 44/81 (54%)
Query: 44 RELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP 103
R+ GH G VN + +N + ++++SGS D+ I W SRK ++T A +
Sbjct: 103 RKFRGHAGKVNTVQFNEEATVILSGSIDSTIRCWDCRSRKP-EPVQTLDEARDGISSV-- 159
Query: 104 ETSDELVVSGAGDAEVRLFNL 124
+ SD V++G+ D VR ++L
Sbjct: 160 KVSDHEVLAGSVDGRVRRYDL 180
Score = 90 (36.7 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 24/79 (30%), Positives = 37/79 (46%)
Query: 619 YVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCH 678
Y GH N + K L +R ++ S S+DG+ F W+ G L L VV + H
Sbjct: 229 YTGHKN--KEYKLDCCLSERDTHVVSCSEDGKVFFWDLVEGALALALPVGPGVVQSLTYH 286
Query: 679 PFD-CVVATSGIDNTIKIW 696
P + C++ G +I+ W
Sbjct: 287 PTEPCLLTAMG--GSIQCW 303
Score = 73 (30.8 bits), Expect = 0.00058, Sum P(2) = 0.00058
Identities = 45/173 (26%), Positives = 76/173 (43%)
Query: 40 LSQER--ELEGHQGCVNAISWNSKGSLLIS-GSDDTHINVWSYSSRKLLHSIETGHSANV 96
L Q+R L+ QG V A+ +N G+ ++ GSD T + +W+ LL + +GH V
Sbjct: 13 LPQKRLKTLDCGQGAVRAVRFNVDGNYCLTCGSDKT-LKLWNPLRGTLLRTY-SGHGYEV 70
Query: 97 FCTKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVE 156
+ S + SG GD V L++++ SG+ + ++ H +V +
Sbjct: 71 LDAAGSFDNSS--LCSGGGDKAVVLWDVA--SGQVVRK--------FRGHAGKVNTVQFN 118
Query: 157 VGNPHVVWSASEDGTLRQHDFRQGSSCPPAGSSHQECRNILLDLRCGAKRSLA 209
V+ S S D T+R D R S P + E R+ + ++ LA
Sbjct: 119 E-EATVILSGSIDSTIRCWDCR--SRKPEPVQTLDEARDGISSVKVSDHEVLA 168
>UNIPROTKB|F1NII4 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 PRINTS:PR00319 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:AADN02025808 EMBL:AADN02025807
IPI:IPI00592422 ProteinModelPortal:F1NII4
Ensembl:ENSGALT00000007475 Uniprot:F1NII4
Length = 498
Score = 123 (48.4 bits), Expect = 0.00038, P = 0.00038
Identities = 27/77 (35%), Positives = 43/77 (55%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L GH V I+W++ LL+SGS D+ + VW ++KL + GH+ VF T + P+
Sbjct: 423 LRGHVSAVYQIAWSADSRLLVSGSSDSTLKVWDAETKKLAIDLP-GHADEVFATDWSPD- 480
Query: 106 SDELVVSGAGDAEVRLF 122
+ V SG D +R++
Sbjct: 481 -GQRVASGGKDKCLRIW 496
Score = 106 (42.4 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 38/148 (25%), Positives = 71/148 (47%)
Query: 47 EGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP-ET 105
+GH+ V +I+W+ G L SG ++ I +W ++ + + TGHS + C + P
Sbjct: 166 KGHRHWVLSIAWSPDGKKLASGCKNSQIFLWDPATGNQIGRVLTGHSKWITCLCWEPLHI 225
Query: 106 SDEL--VVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHVV 163
+ E + S + D +R+++ GR D +T HT+ V V+ G ++
Sbjct: 226 NPECRYLASASKDGSIRIWDT--LMGRC--DKILTG------HTQSVT--CVKWGGDGLL 273
Query: 164 WSASEDGTLRQHDFRQGSSCPPA-GSSH 190
+S+S+D T++ + G C G +H
Sbjct: 274 YSSSQDRTIKVWRSQDGILCRTLQGHAH 301
Score = 97 (39.2 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 19/62 (30%), Positives = 36/62 (58%)
Query: 636 GQRGDYIASGSDDGRWFIWEK-QTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIK 694
GQ + + SGSDD F+W + + ++ + G +A++N V P ++A++ D +IK
Sbjct: 351 GQGPERLVSGSDDFTLFLWRPAEDKKPLERMTGHQALINQVLFSPDTRIIASASFDKSIK 410
Query: 695 IW 696
+W
Sbjct: 411 LW 412
Score = 86 (35.3 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 49/199 (24%), Positives = 90/199 (45%)
Query: 4 FPFHDGSIYDMLDT----RHTDTRPDVNHSLQMHSSL-VRRLSQ-ERELEGHQGCVNAIS 57
F FHD I L+ + +T ++ Q + VR +++ LEGH V +++
Sbjct: 75 FFFHDAEIVVSLEKTLAGQAVETEKVLDIIYQPQAVFRVRAVTRCTSSLEGHTEAVISVA 134
Query: 58 WNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPETSDELVVSGAGDA 117
++ G L SGS DT + W S+ + + GH V + P+ + + SG ++
Sbjct: 135 FSPTGKYLASGSGDTTVRFWDLSTETPQFTAK-GHRHWVLSIAWSPD--GKKLASGCKNS 191
Query: 118 EVRLFNLSRFS--GRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHVVW--SASEDGTLR 173
++ L++ + + GR L ++ + L C + L + NP + SAS+DG++R
Sbjct: 192 QIFLWDPATGNQIGRVLTGHSKWITCL--CW----EPLHI---NPECRYLASASKDGSIR 242
Query: 174 QHDFRQGSSCPPAGSSHQE 192
D G C + H +
Sbjct: 243 IWDTLMGR-CDKILTGHTQ 260
Score = 74 (31.1 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 20/65 (30%), Positives = 32/65 (49%)
Query: 29 SLQMHSSLVRRLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSI 88
S+++ +L+ R ++ L GH V + W G LL S S D I VW L ++
Sbjct: 240 SIRIWDTLMGRC--DKILTGHTQSVTCVKWGGDG-LLYSSSQDRTIKVWRSQDGILCRTL 296
Query: 89 ETGHS 93
+ GH+
Sbjct: 297 Q-GHA 300
Score = 71 (30.1 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 24/96 (25%), Positives = 40/96 (41%)
Query: 642 IASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIWTPSAS 701
IAS S D +WE +TG+ + L G + V + ++ + D+T+K+W
Sbjct: 400 IASASFDKSIKLWEGRTGKYLTSLRGHVSAVYQIAWSADSRLLVSGSSDSTLKVWDAETK 459
Query: 702 VPSIVSGGAAGPDTADVLEAMESNQRKLSRNREHSL 737
+I G A D + QR S ++ L
Sbjct: 460 KLAIDLPGHA--DEVFATDWSPDGQRVASGGKDKCL 493
Score = 67 (28.6 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 17/55 (30%), Positives = 25/55 (45%)
Query: 642 IASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW 696
+ SGS D +W+ +T +L L G V P VA+ G D ++IW
Sbjct: 442 LVSGSSDSTLKVWDAETKKLAIDLPGHADEVFATDWSPDGQRVASGGKDKCLRIW 496
>MGI|MGI:1915086 [details] [associations]
symbol:Wdr83 "WD repeat domain containing 83" species:10090
"Mus musculus" [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1915086 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 GO:GO:0000375
GeneTree:ENSGT00700000104496 HOGENOM:HOG000091642 CTD:84292
HOVERGEN:HBG105288 KO:K13124 OrthoDB:EOG4ZCT4V OMA:CKQGAVR
EMBL:AY365434 EMBL:AK005790 EMBL:AK020654 EMBL:BC005587
EMBL:BC019369 EMBL:BC094624 IPI:IPI00118714 IPI:IPI00407931
IPI:IPI00624217 RefSeq:NP_080675.2 UniGene:Mm.334680
ProteinModelPortal:Q9DAJ4 SMR:Q9DAJ4 STRING:Q9DAJ4
PhosphoSite:Q9DAJ4 PRIDE:Q9DAJ4 Ensembl:ENSMUST00000093357
Ensembl:ENSMUST00000149050 GeneID:67836 KEGG:mmu:67836
UCSC:uc009mph.1 InParanoid:Q9DAJ4 NextBio:325661 Bgee:Q9DAJ4
CleanEx:MM_1500041N16RIK Genevestigator:Q9DAJ4
GermOnline:ENSMUSG00000005150 Uniprot:Q9DAJ4
Length = 315
Score = 106 (42.4 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 24/81 (29%), Positives = 44/81 (54%)
Query: 44 RELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP 103
R+ GH G VN + +N + ++++SGS D+ + W SRK ++T A +
Sbjct: 103 RKFRGHAGKVNTVQFNEEATVILSGSIDSSVRCWDCRSRKP-EPVQTLDEARDGISSV-- 159
Query: 104 ETSDELVVSGAGDAEVRLFNL 124
+ SD +++G+ D VR ++L
Sbjct: 160 KVSDHEILAGSVDGRVRRYDL 180
Score = 91 (37.1 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 25/79 (31%), Positives = 37/79 (46%)
Query: 619 YVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCH 678
YVGH N K L +R ++ S S+DG+ F W+ G L L VV + H
Sbjct: 229 YVGHKN--QQYKLDCCLSERDTHVVSCSEDGKVFFWDLVEGALALALPVGSNVVQSLAYH 286
Query: 679 PFD-CVVATSGIDNTIKIW 696
P + C++ G +I+ W
Sbjct: 287 PTEPCLLTAMG--GSIQYW 303
Score = 71 (30.1 bits), Expect = 1.0e-06, Sum P(3) = 1.0e-06
Identities = 27/89 (30%), Positives = 45/89 (50%)
Query: 40 LSQER--ELEGHQGCVNAISWNSKGSLLIS-GSDDTHINVWSYSSRKLLHSIETGHSANV 96
L Q+R L+ QG V A+ +N G+ ++ GSD T + +W+ LL + +GH V
Sbjct: 13 LPQKRMKTLDCSQGAVRAVRFNVDGNYCLTCGSDKT-LKLWNPLRGTLLRTY-SGHGYEV 70
Query: 97 FCTKFVPETSDELVVSGAGDAEVRLFNLS 125
+ S + SG GD V L++++
Sbjct: 71 LDAAGSFDNSH--LCSGGGDKTVVLWDVA 97
Score = 67 (28.6 bits), Expect = 1.0e-06, Sum P(3) = 1.0e-06
Identities = 29/93 (31%), Positives = 40/93 (43%)
Query: 162 VVWSASEDGTLRQHDFRQGSSCPPAGSSHQECRNIL---LD--LRCGAKRSLADPPKQTL 216
V+W + +R+ FR + ++E IL +D +RC RS P QTL
Sbjct: 92 VLWDVATGQVVRK--FRGHAGKVNTVQFNEEATVILSGSIDSSVRCWDCRSRKPEPVQTL 149
Query: 217 SLKSCDISSTR--PHLLLVGGSDAFARLYDRRM 247
ISS + H +L G D R YD RM
Sbjct: 150 DEARDGISSVKVSDHEILAGSVDGRVRRYDLRM 182
>FB|FBgn0040207 [details] [associations]
symbol:kat80 "katanin 80" species:7227 "Drosophila
melanogaster" [GO:0008352 "katanin complex" evidence=ISS;NAS]
[GO:0051013 "microtubule severing" evidence=ISS;NAS] [GO:0007017
"microtubule-based process" evidence=ISS] [GO:0008017 "microtubule
binding" evidence=IEA;ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008017 GO:GO:0051013 HSSP:P16649
GO:GO:0008352 PANTHER:PTHR19845 FlyBase:FBgn0040207 EMBL:AF223065
ProteinModelPortal:Q9NHF0 PRIDE:Q9NHF0 InParanoid:Q9NHF0
ArrayExpress:Q9NHF0 Bgee:Q9NHF0 Uniprot:Q9NHF0
Length = 823
Score = 111 (44.1 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 39/150 (26%), Positives = 73/150 (48%)
Query: 35 SLVRRL-SQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHS 93
+L R+L S+ +++ H V ++ G +L++G +D ++N+W+ + S+ TGH+
Sbjct: 2 ALPRKLISKIYDIKAHDSRVTSLDLGETGRVLVTGGEDRNVNLWAIGQNECFMSL-TGHN 60
Query: 94 ANVFCTKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKL 153
++ C +F + D V S A D + + R+ L+ I S L H + + L
Sbjct: 61 RSIDCVRFAYK--DNFVYS-ADDIGI----IRRWD---LNSQKIY-STL-NGHMKSGRTL 108
Query: 154 AVEVGNPHVVWSASEDGTLRQHDFRQGSSC 183
+VV S S D T+R D + ++C
Sbjct: 109 DFNPSGEYVV-SGSNDTTVRLWDVQNENNC 137
Score = 97 (39.2 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 20/60 (33%), Positives = 33/60 (55%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAV--VNCVQCHPFDCVVATSGIDNTIKIW 696
G +IAS +G IW+ + + I + D V + CVQ HPF+ ++A +D T+ I+
Sbjct: 157 GLWIASAGLEGSILIWDIRKSKQIMEFIADPPVTAITCVQFHPFEFLLAAGRVDGTVSIY 216
>UNIPROTKB|E2RGD1 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005932 "microtubule basal body"
evidence=IEA] [GO:0005814 "centriole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 EMBL:AAEX03012199
ProteinModelPortal:E2RGD1 Ensembl:ENSCAFT00000015650 OMA:IVWGLET
Uniprot:E2RGD1
Length = 406
Score = 110 (43.8 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 35/133 (26%), Positives = 61/133 (45%)
Query: 41 SQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTK 100
S ER +GH+ + ++ ++ L SGS D+ + VW + + GH V C
Sbjct: 10 SLERHFKGHRDAITSVDFSLNTKQLASGSMDSCLMVWHMKPQSRAYRF-AGHKDAVTCVN 68
Query: 101 FVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNP 160
F P S L+ SG+ D VR++ + G S +++ HT V+ +
Sbjct: 69 FSP--SGHLLASGSRDKTVRIW-IPNVKGE---------STVFRAHTATVRSVHFCSDGQ 116
Query: 161 HVVWSASEDGTLR 173
+V +AS+D T++
Sbjct: 117 SLV-TASDDKTVK 128
Score = 106 (42.4 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 25/75 (33%), Positives = 40/75 (53%)
Query: 49 HQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPETSDE 108
H V ++ + S G L++ SDD + VWS +K L S+ H V C +F P+
Sbjct: 102 HTATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQKFLFSLSQ-HINWVRCARFSPD--GR 158
Query: 109 LVVSGAGDAEVRLFN 123
L+VS + D V+L++
Sbjct: 159 LIVSASDDKTVKLWD 173
Score = 90 (36.7 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 18/58 (31%), Positives = 27/58 (46%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW 696
G I S SDD +W+K + + V V HP +A + +DNT+K+W
Sbjct: 157 GRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAASMDNTVKVW 214
Score = 83 (34.3 bits), Expect = 7.9e-07, Sum P(2) = 7.9e-07
Identities = 22/74 (29%), Positives = 35/74 (47%)
Query: 622 HCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFD 681
+C G + F G IA+ S D +W+ +T RL++ A VN + HP
Sbjct: 183 YCEHGGFVTYVDF-HPSGTCIAAASMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSG 241
Query: 682 CVVATSGIDNTIKI 695
+ T+ D+T+KI
Sbjct: 242 NYLLTASSDSTLKI 255
Score = 80 (33.2 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 21/86 (24%), Positives = 42/86 (48%)
Query: 41 SQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTK 100
S+ GH+ V ++++ G LL SGS D + +W + K ++ H+A V
Sbjct: 52 SRAYRFAGHKDAVTCVNFSPSGHLLASGSRDKTVRIW-IPNVKGESTVFRAHTATVRSVH 110
Query: 101 FVPETSDELVVSGAGDAEVRLFNLSR 126
F + + +V+ + D V++++ R
Sbjct: 111 FCSD--GQSLVTASDDKTVKVWSTHR 134
Score = 61 (26.5 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 21/92 (22%), Positives = 36/92 (39%)
Query: 612 VIDMK-QRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEA 670
V D++ R + H + + A G+Y+ + S D I + GRL+ L G +
Sbjct: 213 VWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLLTASSDSTLKILDLMEGRLLYTLHGHQG 272
Query: 671 VVNCVQCHPFDCVVATSGIDNTIKIWTPSASV 702
V A+ G D + +W + V
Sbjct: 273 PATTVAFSRTGEYFASGGSDEQVMVWKSNFDV 304
>DICTYBASE|DDB_G0278945 [details] [associations]
symbol:DDB_G0278945 "WD repeat-containing protein 82"
species:44689 "Dictyostelium discoideum" [GO:0030587 "sorocarp
development" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0278945 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030587 EMBL:AAFI02000024 KO:K14962 OMA:CTNMAFW
RefSeq:XP_641992.1 ProteinModelPortal:Q54XN8 STRING:Q54XN8
EnsemblProtists:DDB0218126 GeneID:8621724 KEGG:ddi:DDB_G0278945
InParanoid:Q54XN8 ProtClustDB:CLSZ2729103 Uniprot:Q54XN8
Length = 319
Score = 114 (45.2 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 28/89 (31%), Positives = 45/89 (50%)
Query: 614 DMKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVN 673
++KQRY N + ++SF Y+ SGS+DG IW+ TG + + G + V
Sbjct: 233 EVKQRYTSFKNDNGSVIESSF-SPDAQYVLSGSEDGTVHIWKTLTGEEVAVWGGHSSTVG 291
Query: 674 CVQCHPFDCVVATSGIDNTIKIWTPSASV 702
VQ +P + AT+ + + W P+ SV
Sbjct: 292 RVQWNPRSMMAATAC--SNLAFWIPNDSV 318
Score = 82 (33.9 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 33/151 (21%), Positives = 71/151 (47%)
Query: 29 SLQMHSSLVRRLSQER-ELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHS 87
+L++ ++V+ + + + + +N++ +N GSLLI+ SDD I++++ + +L +
Sbjct: 4 TLRLTDNVVQNMGIGKLHKDDNSSVINSMDFNKDGSLLITASDDESIHLYNIDTGELQKT 63
Query: 88 IETGHSANVFCTKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHT 147
+ + V KF ++ ++ + + L LS L DN ++ H
Sbjct: 64 LNS-KKYGVDLIKFT-HNNNSIICASKNSWDESLRYLS------LHDNKYLK--YFKGHR 113
Query: 148 RRVKKLAVEVGNPHVVWSASEDGTLRQHDFR 178
+V +++ N + S S D T+R D R
Sbjct: 114 NKVVSISMSPINDMFL-SGSLDDTIRMWDLR 143
>ZFIN|ZDB-GENE-040426-1192 [details] [associations]
symbol:tbl1xr1 "transducin (beta)-like 1 X-linked
receptor 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040426-1192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 GeneTree:ENSGT00690000102024
EMBL:CT027646 IPI:IPI00854144 Ensembl:ENSDART00000085132
Bgee:F1Q5U2 Uniprot:F1Q5U2
Length = 511
Score = 146 (56.5 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 42/136 (30%), Positives = 68/136 (50%)
Query: 2 ENFPFHDGSIYDMLDTRHTDTRPDVNHSLQMHSSLVRRLSQEREL---EGHQGCVNAISW 58
+ FPFH D+ D + +T + + +H V +L QER + +GH VNAI W
Sbjct: 298 QQFPFHSAPALDV-DWQSNNTFASCSTDMCIH---VCKLGQERPIKTFQGHTNEVNAIKW 353
Query: 59 NSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPE---TSDE-----LV 110
+ G+LL S SDD + +WS +H ++ HS ++ K+ P T++ L
Sbjct: 354 DPTGNLLASCSDDMTLKLWSMKQDTCVHDLQA-HSKEIYTIKWSPTGPGTNNPNANLMLA 412
Query: 111 VSGAGDAEVRLFNLSR 126
S + D+ VRL++ R
Sbjct: 413 RSASFDSTVRLWDAER 428
Score = 54 (24.1 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLG 667
G ++ASGS D IW Q+G L+ G
Sbjct: 451 GRHLASGSFDKCVHIWNTQSGALVNSYRG 479
Score = 52 (23.4 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 17/66 (25%), Positives = 27/66 (40%)
Query: 644 SGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW-TPSASV 702
S S D +W+ + G I L + V V P +A+ D + IW T S ++
Sbjct: 414 SASFDSTVRLWDAERGACIHTLTKHQEPVYSVAFSPDGRHLASGSFDKCVHIWNTQSGAL 473
Query: 703 PSIVSG 708
+ G
Sbjct: 474 VNSYRG 479
>UNIPROTKB|Q9GL51 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005737 GO:GO:0007399
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0016042 GO:GO:0006810 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 EMBL:AF319658
RefSeq:NP_999415.1 UniGene:Ssc.802 ProteinModelPortal:Q9GL51
SMR:Q9GL51 STRING:Q9GL51 PRIDE:Q9GL51 GeneID:397482 KEGG:ssc:397482
Uniprot:Q9GL51
Length = 410
Score = 112 (44.5 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 37/156 (23%), Positives = 72/156 (46%)
Query: 37 VRRLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANV 96
+ R ++ L GH+ V + ++ S+++S S+D I VW Y + +++ GH+ +V
Sbjct: 95 IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLK-GHTDSV 153
Query: 97 FCTKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVE 156
F + S +L+ S + D ++L++ F I H V +A+
Sbjct: 154 QDISF--DHSGKLLASCSADMTIKLWDFQGFE-------CIRTM---HGHDHNVSSVAIM 201
Query: 157 VGNPHVVWSASEDGTLRQHDFRQGSSCPPAGSSHQE 192
H+V SA+ D T++ + + G C + H+E
Sbjct: 202 PNGDHIV-SAARDKTIKMWEVQTGY-CVKTFTGHRE 235
Score = 87 (35.7 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 18/58 (31%), Positives = 28/58 (48%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW 696
G +I S +DD +W+ + R +K L E V + H V T +D T+K+W
Sbjct: 350 GKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 81 (33.6 bits), Expect = 7.9e-07, Sum P(2) = 7.9e-07
Identities = 19/71 (26%), Positives = 36/71 (50%)
Query: 626 GTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVA 685
G++ K++ G+ G ++ SGS D +W+ TG + L+G + V V H +
Sbjct: 298 GSETKKS---GKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFIL 354
Query: 686 TSGIDNTIKIW 696
+ D T+++W
Sbjct: 355 SCADDKTLRVW 365
>MGI|MGI:1341200 [details] [associations]
symbol:Pwp2 "PWP2 periodic tryptophan protein homolog
(yeast)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1341200 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR011047
SUPFAM:SSF50998 GeneTree:ENSGT00550000074981 HOGENOM:HOG000160363
KO:K14558 OMA:VWQCDTP InterPro:IPR027145 InterPro:IPR007148
PANTHER:PTHR19858 Pfam:PF04003 CTD:5822 HOVERGEN:HBG030681
OrthoDB:EOG4R7V93 EMBL:AK088254 EMBL:AK088983 IPI:IPI00469755
RefSeq:NP_083822.1 RefSeq:XP_003946476.1 UniGene:Mm.103522
ProteinModelPortal:Q8BU03 SMR:Q8BU03 STRING:Q8BU03
PhosphoSite:Q8BU03 PRIDE:Q8BU03 Ensembl:ENSMUST00000042556
GeneID:110816 KEGG:mmu:110816 InParanoid:Q8BU03 ChiTaRS:PWP2
NextBio:364713 Bgee:Q8BU03 CleanEx:MM_PWP2 Genevestigator:Q8BU03
GermOnline:ENSMUSG00000032834 Uniprot:Q8BU03
Length = 919
Score = 109 (43.4 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 19/59 (32%), Positives = 37/59 (62%)
Query: 639 GDYIASGSDDG-RWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW 696
G+ +++G+ D F+W QTGRL+ +L G E V+ + +P ++A++ D T+++W
Sbjct: 470 GEIVSAGAQDSFEIFVWSMQTGRLLDVLSGHEGPVSGLCFNPMKSILASASWDKTVRLW 528
Score = 99 (39.9 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 23/81 (28%), Positives = 44/81 (54%)
Query: 47 EGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPETS 106
+GH + A++++ G +++G DD + VW+ S ++ T HS+ V F T+
Sbjct: 370 QGHFNSMVALAYSPDGQYIVTGGDDGKVKVWNTLSGFCFVTL-TEHSSGVTGVTFT--TT 426
Query: 107 DELVVSGAGDAEVRLFNLSRF 127
++V+ + D VR F+L R+
Sbjct: 427 GHVIVTSSLDGTVRAFDLHRY 447
Score = 71 (30.1 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 31/129 (24%), Positives = 58/129 (44%)
Query: 53 VNAISWNSKGSLLISG-SDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPETSDELVV 111
V +++ NS G + G S + VW + S + + GH ++ + P+ + +V
Sbjct: 333 VASVAINSSGDWIAFGCSGMGQLLVWEWQSESYVLK-QQGHFNSMVALAYSPD--GQYIV 389
Query: 112 SGAGDAEVRLFN-LSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHVVWSASEDG 170
+G D +V+++N LS F L + H+ V + HV+ ++S DG
Sbjct: 390 TGGDDGKVKVWNTLSGFCFVTLTE-----------HSSGVTGVTFTTTG-HVIVTSSLDG 437
Query: 171 TLRQHDFRQ 179
T+R D +
Sbjct: 438 TVRAFDLHR 446
>UNIPROTKB|E1BYR9 [details] [associations]
symbol:ATG16L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000421 "autophagic vacuole membrane"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00700000104505 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000421 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE EMBL:AADN02024429 EMBL:AADN02024430 IPI:IPI00589713
Ensembl:ENSGALT00000002475 Uniprot:E1BYR9
Length = 608
Score = 120 (47.3 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 26/86 (30%), Positives = 48/86 (55%)
Query: 39 RLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFC 98
R + L G + +I ++S GS L++ S+D +W+ +L H++ TGHS V
Sbjct: 355 RCEPKGSLSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDNRLRHTL-TGHSGKVLS 413
Query: 99 TKFVPETSDELVVSGAGDAEVRLFNL 124
KF+ + + +VSG+ D ++L++L
Sbjct: 414 AKFLLDNAR--IVSGSHDRTLKLWDL 437
Score = 83 (34.3 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 21/73 (28%), Positives = 35/73 (47%)
Query: 626 GTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAV-VNCVQCHPFDCVV 684
G+D + F G+Y+A+GS DG ++W TG+L + L + +N V P V
Sbjct: 535 GSDWTRVVF-SPDGNYVAAGSADGALYVWNVLTGKLERTLAKHHSSPINAVAWSPAGAHV 593
Query: 685 ATSGIDNTIKIWT 697
+ N +W+
Sbjct: 594 VSVDKGNKAVLWS 606
>UNIPROTKB|Q58D20 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:BT021777 IPI:IPI00688704
RefSeq:NP_001014887.1 UniGene:Bt.22388 ProteinModelPortal:Q58D20
STRING:Q58D20 PRIDE:Q58D20 Ensembl:ENSBTAT00000025423 GeneID:509793
KEGG:bta:509793 CTD:54475 HOVERGEN:HBG007602 InParanoid:Q58D20
OrthoDB:EOG4BCDMS NextBio:20869131 Uniprot:Q58D20
Length = 486
Score = 104 (41.7 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 50/199 (25%), Positives = 91/199 (45%)
Query: 4 FPFHDGSIYDML----DTRHTDTRPDVNHSLQMHSSL-VRRLSQ-ERELEGHQGCVNAIS 57
F HD I L +++ +T ++ Q + VR +++ LEGH V +++
Sbjct: 63 FYVHDAEIVSSLGRTLESQAVETEKVLDIIYQPQAIFRVRAVTRCTSSLEGHSEAVISVA 122
Query: 58 WNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPETSDELVVSGAGDA 117
++ G L SGS DT + W S+ + H GH V + P+ + + SG +
Sbjct: 123 FSPTGKYLASGSGDTTVRFWDLST-ETPHFTCQGHRHWVLSISWSPD--GKKLASGCKNG 179
Query: 118 EVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEV--GNPHV--VWSASEDGTLR 173
++ L++ S +G+ + A+T H++ + L+ E NP V S+S+DG++R
Sbjct: 180 QILLWDPS--TGKQVG-RALTG------HSKWITALSWEPLHANPECRYVASSSKDGSVR 230
Query: 174 QHDFRQGSSCPPAGSSHQE 192
D G C + H +
Sbjct: 231 VWDTTAGR-CERTLTGHAQ 248
Score = 100 (40.3 bits), Expect = 5.9e-07, Sum P(2) = 5.9e-07
Identities = 40/136 (29%), Positives = 65/136 (47%)
Query: 47 EGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP-ET 105
+GH+ V +ISW+ G L SG + I +W S+ K + TGHS + + P
Sbjct: 154 QGHRHWVLSISWSPDGKKLASGCKNGQILLWDPSTGKQVGRALTGHSKWITALSWEPLHA 213
Query: 106 SDEL--VVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHVV 163
+ E V S + D VR+++ + +GR + +T H + V L G ++
Sbjct: 214 NPECRYVASSSKDGSVRVWDTT--AGRC--ERTLTG------HAQSVTCL--RWGGDGLL 261
Query: 164 WSASEDGTL---RQHD 176
+SAS+D T+ R HD
Sbjct: 262 YSASQDRTIKVWRAHD 277
Score = 97 (39.2 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 20/62 (32%), Positives = 35/62 (56%)
Query: 636 GQRGDYIASGSDDGRWFIWEK-QTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIK 694
GQ + + SGSDD F+W + + + + G +A++N V P V+A++ D +IK
Sbjct: 339 GQGPERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVVFSPDSRVIASASFDKSIK 398
Query: 695 IW 696
+W
Sbjct: 399 LW 400
Score = 77 (32.2 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 20/54 (37%), Positives = 24/54 (44%)
Query: 43 ERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIET-GHSAN 95
ER L GH V + W G LL S S D I VW L +++ GH N
Sbjct: 240 ERTLTGHAQSVTCLRWGGDG-LLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVN 292
Score = 74 (31.1 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 25/96 (26%), Positives = 41/96 (42%)
Query: 642 IASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIWTPSAS 701
IAS S D +W+ +TG+ + L G A V + ++ + D+T+K+W A
Sbjct: 388 IASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQ 447
Query: 702 VPSIVSGGAAGPDTADVLEAMESNQRKLSRNREHSL 737
S G A D ++ QR S ++ L
Sbjct: 448 KLSTDLPGHA--DEVYAVDWSPDGQRVASGGKDKCL 481
Score = 66 (28.3 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 17/55 (30%), Positives = 25/55 (45%)
Query: 642 IASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW 696
+ SGS D +W+ + +L L G V V P VA+ G D ++IW
Sbjct: 430 LVSGSSDSTLKVWDVKAQKLSTDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 484
>ZFIN|ZDB-GENE-040718-126 [details] [associations]
symbol:wdr83 "WD repeat domain containing 83"
species:7955 "Danio rerio" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040718-126 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091642
EMBL:BC076138 IPI:IPI00510406 RefSeq:NP_001002429.1
UniGene:Dr.80944 ProteinModelPortal:Q6DH44 STRING:Q6DH44
PRIDE:Q6DH44 GeneID:436702 KEGG:dre:436702 CTD:84292
HOVERGEN:HBG105288 InParanoid:Q6DH44 KO:K13124 OrthoDB:EOG4ZCT4V
NextBio:20831145 ArrayExpress:Q6DH44 Uniprot:Q6DH44
Length = 315
Score = 95 (38.5 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 22/81 (27%), Positives = 44/81 (54%)
Query: 44 RELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP 103
R+L GH G VN + +N + ++++SGS D + W SR++ I+ + +
Sbjct: 103 RKLRGHAGKVNCVQFNEEATVMLSGSIDGTVRCWDTRSRRM-EPIQILDESQDGISSL-- 159
Query: 104 ETSDELVVSGAGDAEVRLFNL 124
+ S+ +++G+ D VR ++L
Sbjct: 160 KVSEHELLTGSVDGRVRRYDL 180
Score = 93 (37.8 bits), Expect = 2.4e-07, Sum P(3) = 2.4e-07
Identities = 25/84 (29%), Positives = 44/84 (52%)
Query: 614 DMKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRL-IKMLLGDEAVV 672
+M Y GH N G K L + ++ S S+DG + W+ G L +K+ +G +AVV
Sbjct: 224 EMLGEYSGHVNKG--YKLDCCLTDKDTHVLSCSEDGHVYYWDLVEGSLTLKLPVG-KAVV 280
Query: 673 NCVQCHPFDCVVATSGIDNTIKIW 696
+ HP + + TS ++ +++W
Sbjct: 281 QSLSFHPTEPRLLTS-MEGRVQVW 303
Score = 88 (36.0 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 22/78 (28%), Positives = 36/78 (46%)
Query: 619 YVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCH 678
Y GH G ++ A + S S D +W+ +G++ + L G VNCVQ +
Sbjct: 63 YSGH---GYEVLDADG-SYDNSQLCSCSSDKTVILWDVASGQVTRKLRGHAGKVNCVQFN 118
Query: 679 PFDCVVATSGIDNTIKIW 696
V+ + ID T++ W
Sbjct: 119 EEATVMLSGSIDGTVRCW 136
Score = 78 (32.5 bits), Expect = 2.4e-07, Sum P(3) = 2.4e-07
Identities = 17/53 (32%), Positives = 29/53 (54%)
Query: 44 RELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANV 96
R ++ QG V A+ +N+ G+ L++ D + +WS S LL + +GH V
Sbjct: 19 RTVDCQQGAVRAVRFNADGNYLLTCGSDKSLKLWSVSRGTLLKTY-SGHGYEV 70
Score = 64 (27.6 bits), Expect = 2.4e-07, Sum P(3) = 2.4e-07
Identities = 38/110 (34%), Positives = 43/110 (39%)
Query: 200 LRCGAKRSLADPPKQTLSLKSCDISSTR--PHLLLVGGSDAFARLYDRRMLPPLTSCQKR 257
+RC RS P Q L ISS + H LL G D R YD RM
Sbjct: 133 VRCWDTRSRRMEPIQILDESQDGISSLKVSEHELLTGSVDGRVRRYDLRM--GQLQVDYI 190
Query: 258 MSPPPCVNYFCPMHLSEHGR----SSLHLTHVTFSPNGEEVLLSYSGEHV 303
SP CV C S G+ SSL T + E+L YSG HV
Sbjct: 191 GSPITCV---C---FSRDGQCTLSSSLDSTVRLLDKSTGEMLGEYSG-HV 233
>UNIPROTKB|Q9PTR5 [details] [associations]
symbol:PAFAH1B1 "Lissencephaly-1 homolog" species:9031
"Gallus gallus" [GO:0007067 "mitosis" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0000132 "establishment of mitotic
spindle orientation" evidence=IEA] [GO:0000235 "astral microtubule"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0001675 "acrosome
assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0007405 "neuroblast proliferation" evidence=IEA]
[GO:0007611 "learning or memory" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0008090 "retrograde axon
cargo transport" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0031023 "microtubule organizing center organization"
evidence=IEA] [GO:0031252 "cell leading edge" evidence=IEA]
[GO:0031512 "motile primary cilium" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0036035
"osteoclast development" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0048854 "brain morphogenesis"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051219 "phosphoprotein binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0000132 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0005875 GO:GO:0007399 GO:GO:0031252 GO:GO:0030154
GO:GO:0000776 GO:GO:0051301 GO:GO:0016477 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 EMBL:AF113946 IPI:IPI00596826
RefSeq:NP_989655.1 UniGene:Gga.11892 ProteinModelPortal:Q9PTR5
SMR:Q9PTR5 STRING:Q9PTR5 PRIDE:Q9PTR5 Ensembl:ENSGALT00000009368
GeneID:374224 KEGG:gga:374224 InParanoid:Q9PTR5 NextBio:20813726
GO:GO:0051081 Uniprot:Q9PTR5
Length = 410
Score = 112 (44.5 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 37/156 (23%), Positives = 72/156 (46%)
Query: 37 VRRLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANV 96
+ R ++ L GH+ V + ++ S+++S S+D I VW Y + +++ GH+ +V
Sbjct: 95 IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLK-GHTDSV 153
Query: 97 FCTKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVE 156
F + + +L+ S + D ++L++ F I H V +A+
Sbjct: 154 QDISF--DHTGKLLASCSADMTIKLWDFQGFE-------CIRTM---HGHDHNVSSVAIM 201
Query: 157 VGNPHVVWSASEDGTLRQHDFRQGSSCPPAGSSHQE 192
H+V SAS D T++ + + G C + H+E
Sbjct: 202 PNGDHIV-SASRDKTIKMWEVQTGY-CVKTFTGHRE 235
Score = 86 (35.3 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 18/58 (31%), Positives = 28/58 (48%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW 696
G +I S +DD +W+ + R +K L E V + H V T +D T+K+W
Sbjct: 350 GKFILSCADDKTLRVWDFKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 80 (33.2 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 19/71 (26%), Positives = 36/71 (50%)
Query: 626 GTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVA 685
G++ K++ G+ G ++ SGS D +W+ TG + L+G + V V H +
Sbjct: 298 GSETKKS---GKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHSGGKFIL 354
Query: 686 TSGIDNTIKIW 696
+ D T+++W
Sbjct: 355 SCADDKTLRVW 365
>ZFIN|ZDB-GENE-051120-180 [details] [associations]
symbol:taf5 "TAF5 RNA polymerase II, TATA box
binding protein (TBP)-associated factor" species:7955 "Danio rerio"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 ZFIN:ZDB-GENE-051120-180 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 HOVERGEN:HBG050226 OMA:ERQNNQI
OrthoDB:EOG469QW7 HOGENOM:HOG000212424 EMBL:CR812943
IPI:IPI00656497 UniGene:Dr.78627 ProteinModelPortal:B8JIQ0
Ensembl:ENSDART00000015007 ArrayExpress:B8JIQ0 Bgee:B8JIQ0
Uniprot:B8JIQ0
Length = 756
Score = 108 (43.1 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 29/117 (24%), Positives = 56/117 (47%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIWTP 698
G ++ASGS DGR +W+ G +I L G + ++ ++A+ IDNT+++W
Sbjct: 637 GKFLASGSTDGRVLLWDIGHGLMIAELKGHTGTIYALKFSRDGEIIASGSIDNTVRLWDV 696
Query: 699 SASVPSIVSGGAAGPDTADVLEAMESNQRKLSRNREHSLSYELLERFHMHEFSEGSL 755
++ + + T + + N ++L HS S ++ H+H F+ +L
Sbjct: 697 MRAIDDVETDDFTAA-TGHI--HLPDNSQELLLGTYHSKSTAVI---HLH-FTRRNL 746
Score = 97 (39.2 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 40/151 (26%), Positives = 64/151 (42%)
Query: 41 SQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTK 100
S+ + L GH G V +S++ + L+S S+D I +WS + L + GH+ V+ T+
Sbjct: 490 SESKILHGHSGPVYGVSFSPDRNYLLSSSEDGTIRLWSLQTFTCLVGYK-GHNYPVWDTQ 548
Query: 101 FVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNP 160
F P VSG D RL+ + P ++ H V N
Sbjct: 549 FSP--FGYYFVSGGHDRVARLWATDHYQ----------PLRIFAGHLADVTCTRFHP-NS 595
Query: 161 HVVWSASEDGTLRQHDFRQGSSCPPAGSSHQ 191
+ V + S D T+R D G+ C + H+
Sbjct: 596 NYVATGSSDRTVRLWDVLNGN-CVRIFTGHK 625
Score = 64 (27.6 bits), Expect = 9.1e-05, Sum P(3) = 9.1e-05
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKL 84
L +QG + A+ + SL+ G D+ + VWS + +KL
Sbjct: 423 LNAYQG-LTAVDFTDDSSLIAGGFADSTVRVWSVTPKKL 460
Score = 51 (23.0 bits), Expect = 9.1e-05, Sum P(3) = 9.1e-05
Identities = 20/58 (34%), Positives = 22/58 (37%)
Query: 281 HLTHVT---FSPNGEEVLLSYSGEHVYLMDVNHAGGRAMRYTVGDASKIMSFTPTLNG 335
HL VT F PN V S V L DV G +R G I S + NG
Sbjct: 582 HLADVTCTRFHPNSNYVATGSSDRTVRLWDV--LNGNCVRIFTGHKGPIHSLAFSPNG 637
>UNIPROTKB|F1S4C1 [details] [associations]
symbol:DCAF5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005739 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0080008
GeneTree:ENSGT00530000062951 EMBL:CU633187
Ensembl:ENSSSCT00000002564 Uniprot:F1S4C1
Length = 132
Score = 129 (50.5 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 37/122 (30%), Positives = 57/122 (46%)
Query: 10 SIYDMLDTRHTDTRPDVNHSLQMHSSLVRRLSQERELEGHQGCVNAISW-NSKGSLLISG 68
S+ L R P + Q R +++L GH GCVNAI + N+ G L+SG
Sbjct: 13 SVVGFLSQRGLHGDPLLTQDFQRRRLRGCRNLYKKDLLGHFGCVNAIEFSNNGGQWLVSG 72
Query: 69 SDDTHINVW----SYSSRKLLHSIETGHSANVFCTKFVPETSDELVVSGAGDAEVRLFNL 124
DD + +W + SR ++ H +N+FC F + + V SG D +V L ++
Sbjct: 73 GDDRRVLLWHMEQAIHSRVKPIQLKGEHHSNIFCLAF--NSGNTKVFSGGNDEQVILHDV 130
Query: 125 SR 126
R
Sbjct: 131 ER 132
>UNIPROTKB|B8YE10 [details] [associations]
symbol:TBL1Y "Transducin (Beta)-like 1Y-linked"
species:9544 "Macaca mulatta" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] [GO:0007605 "sensory perception of
sound" evidence=ISS] [GO:0008013 "beta-catenin binding"
evidence=ISS] [GO:0017053 "transcriptional repressor complex"
evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006508 GO:GO:0000122 GO:GO:0007605
InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393 GO:GO:0008013
GO:GO:0060070 GO:GO:0005876 KO:K04508 HOGENOM:HOG000220902
HOVERGEN:HBG050240 OrthoDB:EOG412M5M CTD:90665 EMBL:FJ527023
RefSeq:NP_001138540.1 UniGene:Mmu.17760 ProteinModelPortal:B8YE10
STRING:B8YE10 GeneID:100270702 KEGG:mcc:100270702 NextBio:19970520
Uniprot:B8YE10
Length = 520
Score = 140 (54.3 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 39/135 (28%), Positives = 68/135 (50%)
Query: 2 ENFPFHDGSIYDMLDTRHTDTRPDVNHSLQMHSSLVRRLSQEREL---EGHQGCVNAISW 58
+ FPFH D+ D ++ T + + +H V RL +R + +GH VNAI W
Sbjct: 308 QQFPFHSAPALDV-DWQNNTTFASCSTDMCIH---VCRLGCDRPVKTFQGHTNEVNAIKW 363
Query: 59 NSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPE---TSDE----LVV 111
+ G LL S SDD + +WS +H+++ H ++ K+ P TS+ ++
Sbjct: 364 DPSGMLLASCSDDMTLKIWSMKQDACVHNLQA-HRKEIYTIKWSPTGPTTSNPNSSIMLA 422
Query: 112 SGAGDAEVRLFNLSR 126
S + D+ VRL+++ +
Sbjct: 423 SASFDSTVRLWDMEQ 437
Score = 59 (25.8 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 13/29 (44%), Positives = 16/29 (55%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLG 667
G Y+ASGS D IW Q+G L+ G
Sbjct: 460 GKYLASGSFDKCVHIWNTQSGSLVHSYQG 488
Score = 54 (24.1 bits), Expect = 8.8e-07, Sum P(2) = 8.8e-07
Identities = 17/62 (27%), Positives = 26/62 (41%)
Query: 642 IASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW-TPSA 700
+AS S D +W+ + G L + V V P +A+ D + IW T S
Sbjct: 421 LASASFDSTVRLWDMEQGVCTHTLRKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSG 480
Query: 701 SV 702
S+
Sbjct: 481 SL 482
>UNIPROTKB|E2RRL3 [details] [associations]
symbol:WDR83 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
GO:GO:0000375 GeneTree:ENSGT00700000104496 CTD:84292 KO:K13124
OMA:CKQGAVR EMBL:AAEX03012407 RefSeq:XP_542047.1
ProteinModelPortal:E2RRL3 Ensembl:ENSCAFT00000027316 GeneID:484931
KEGG:cfa:484931 NextBio:20858998 Uniprot:E2RRL3
Length = 315
Score = 108 (43.1 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 26/81 (32%), Positives = 44/81 (54%)
Query: 44 RELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP 103
R+ GH G VN + +N + ++++SGS D+ I W SR+ ++T A +
Sbjct: 103 RKFRGHAGKVNTVQFNEEATVILSGSIDSSIRCWDCRSRRP-EPVQTLDEARDGISSV-- 159
Query: 104 ETSDELVVSGAGDAEVRLFNL 124
+ SD V+SG+ D VR ++L
Sbjct: 160 KVSDHEVLSGSVDGRVRRYDL 180
Score = 86 (35.3 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 23/83 (27%), Positives = 37/83 (44%)
Query: 619 YVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCH 678
Y GH N + K L +R ++ S S+DG+ + W+ G L L VV + H
Sbjct: 229 YTGHKN--QEYKLDCCLSERDTHVVSCSEDGKVYFWDLVEGALALALPVGPGVVQSLAYH 286
Query: 679 PFD-CVVATSGIDNTIKIWTPSA 700
P + C++ G ++ W A
Sbjct: 287 PTEPCLLTAMG--GSVHCWREEA 307
Score = 71 (30.1 bits), Expect = 4.5e-06, Sum P(3) = 4.5e-06
Identities = 27/89 (30%), Positives = 45/89 (50%)
Query: 40 LSQER--ELEGHQGCVNAISWNSKGSLLIS-GSDDTHINVWSYSSRKLLHSIETGHSANV 96
L Q+R L+ QG V A+ +N G+ ++ GSD T + +W+ LL + +GH V
Sbjct: 13 LPQKRVKTLDCGQGAVRAVRFNVDGNYCLTCGSDKT-LKLWNPLRGTLLRTY-SGHGYEV 70
Query: 97 FCTKFVPETSDELVVSGAGDAEVRLFNLS 125
+ S + SG GD V L++++
Sbjct: 71 LDAAGSFDNSS--LCSGGGDKAVVLWDVA 97
Score = 66 (28.3 bits), Expect = 4.5e-06, Sum P(3) = 4.5e-06
Identities = 29/93 (31%), Positives = 40/93 (43%)
Query: 162 VVWSASEDGTLRQHDFRQGSSCPPAGSSHQECRNIL---LD--LRCGAKRSLADPPKQTL 216
V+W + +R+ FR + ++E IL +D +RC RS P QTL
Sbjct: 92 VLWDVASGQVVRK--FRGHAGKVNTVQFNEEATVILSGSIDSSIRCWDCRSRRPEPVQTL 149
Query: 217 SLKSCDISSTR--PHLLLVGGSDAFARLYDRRM 247
ISS + H +L G D R YD RM
Sbjct: 150 DEARDGISSVKVSDHEVLSGSVDGRVRRYDLRM 182
>UNIPROTKB|A4RJV3 [details] [associations]
symbol:MDV1 "Mitochondrial division protein 1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0000002
"mitochondrial genome maintenance" evidence=ISS] [GO:0000266
"mitochondrial fission" evidence=ISS] [GO:0005739 "mitochondrion"
evidence=ISS] [GO:0005741 "mitochondrial outer membrane"
evidence=ISS] [GO:0006352 "DNA-dependent transcription, initiation"
evidence=ISS] [GO:0006354 "DNA-dependent transcription, elongation"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0006402 "mRNA catabolic process"
evidence=ISS] [GO:0030014 "CCR4-NOT complex" evidence=ISS]
[GO:0030015 "CCR4-NOT core complex" evidence=ISS] [GO:0051020
"GTPase binding" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005741
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006352
GO:GO:0000002 GO:GO:0006402 EMBL:CM001232 GO:GO:0030015
OrthoDB:EOG469V30 GO:GO:0000266 GO:GO:0006354 GO:GO:0051020
RefSeq:XP_003714706.1 ProteinModelPortal:A4RJV3 STRING:A4RJV3
GeneID:2679351 KEGG:mgr:MGG_01711 Uniprot:A4RJV3
Length = 661
Score = 130 (50.8 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 27/83 (32%), Positives = 50/83 (60%)
Query: 44 RELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP 103
REL HQ C+ A+ +++ L+S + D + VW ++ + + S+E GH+A+V
Sbjct: 313 RELRAHQDCITAMDFDAPFGTLVSAAMDDSVKVWDLNAGRCIGSLE-GHTASVRAL---- 367
Query: 104 ETSDELVVSGAGDAEVRLFNLSR 126
+ D ++ +G+ DA VRL++LS+
Sbjct: 368 QVEDNILATGSRDATVRLWDLSK 390
Score = 72 (30.4 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 22/71 (30%), Positives = 39/71 (54%)
Query: 630 KQASFLG--QRGDY-IASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCV-VA 685
+ A F+G Q D +A G+ DG +W+ ++G++ + L+G V +Q FD + +
Sbjct: 504 EDADFVGAVQVFDAALACGTADGMVRLWDLRSGQVHRNLVGHTGPVTALQ---FDNMHLV 560
Query: 686 TSGIDNTIKIW 696
T D +I+IW
Sbjct: 561 TGSHDRSIRIW 571
Score = 63 (27.2 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 28/101 (27%), Positives = 45/101 (44%)
Query: 642 IASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW---TP 698
+A G+ DG +W+ ++G++ + L+G V +Q V T D +I+IW T
Sbjct: 519 LACGTADGMVRLWDLRSGQVHRNLVGHTGPVTALQFDNMHLV--TGSHDRSIRIWDLRTG 576
Query: 699 SA--------SVPSIVSGG-----AAGPDTADVLEAMESNQ 726
S V S++ AAG D V + +ES Q
Sbjct: 577 SIFDAFAYDHPVTSMMFDARRIVSAAGEDVVKVYDKVESRQ 617
Score = 56 (24.8 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 24/77 (31%), Positives = 34/77 (44%)
Query: 642 IASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIWT-PSA 700
++ G+ DG W +QT R D V VQ FD +A D +++W S
Sbjct: 486 VSLGTGDGAW----RQTAR---SQAEDADFVGAVQV--FDAALACGTADGMVRLWDLRSG 536
Query: 701 SVP-SIVSGGAAGPDTA 716
V ++V G GP TA
Sbjct: 537 QVHRNLV--GHTGPVTA 551
Score = 51 (23.0 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 15/58 (25%), Positives = 29/58 (50%)
Query: 641 YIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDC--VVATSGIDNTIKIW 696
++ +GS D IW+ +TG + D V + + FD +V+ +G D +K++
Sbjct: 558 HLVTGSHDRSIRIWDLRTGSIFDAFAYDHPVTSMM----FDARRIVSAAGED-VVKVY 610
Score = 48 (22.0 bits), Expect = 8.4e-05, Sum P(2) = 8.4e-05
Identities = 11/41 (26%), Positives = 21/41 (51%)
Query: 625 VGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKML 665
+ + + + + L +GD + SGS D W+ GR ++ L
Sbjct: 435 LSSHMDEVTALHFKGDTLVSGSSDKTIRQWDLVKGRCVQTL 475
>UNIPROTKB|Q9BRX9 [details] [associations]
symbol:WDR83 "WD repeat domain-containing protein 83"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IDA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;IDA] [GO:0000375 "RNA
splicing, via transesterification reactions" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:CH471106 GO:GO:0000398 GO:GO:0071013 UniGene:Hs.657204
HOGENOM:HOG000091642 CTD:84292 HOVERGEN:HBG105288 KO:K13124
OrthoDB:EOG4ZCT4V OMA:CKQGAVR EMBL:AK223195 EMBL:AK314164
EMBL:BC005870 IPI:IPI00031581 RefSeq:NP_001093207.1
RefSeq:NP_115708.1 ProteinModelPortal:Q9BRX9 SMR:Q9BRX9
STRING:Q9BRX9 PhosphoSite:Q9BRX9 DMDM:74761224 PRIDE:Q9BRX9
DNASU:84292 Ensembl:ENST00000242796 Ensembl:ENST00000418543
GeneID:84292 KEGG:hsa:84292 UCSC:uc002mue.4 GeneCards:GC19P012777
HGNC:HGNC:32672 HPA:HPA042629 HPA:HPA042838 neXtProt:NX_Q9BRX9
PharmGKB:PA165394765 InParanoid:Q9BRX9 PhylomeDB:Q9BRX9
ChiTaRS:WDR83 GenomeRNAi:84292 NextBio:73931 ArrayExpress:Q9BRX9
Bgee:Q9BRX9 Genevestigator:Q9BRX9 GermOnline:ENSG00000123154
Uniprot:Q9BRX9
Length = 315
Score = 104 (41.7 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 24/81 (29%), Positives = 44/81 (54%)
Query: 44 RELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP 103
R+ GH G VN + +N + ++++SGS D+ I W SR+ ++T A +
Sbjct: 103 RKFRGHAGKVNTVQFNEEATVILSGSIDSSIRCWDCRSRRP-EPVQTLDEARDGVSSV-- 159
Query: 104 ETSDELVVSGAGDAEVRLFNL 124
+ SD +++G+ D VR ++L
Sbjct: 160 KVSDHEILAGSVDGRVRRYDL 180
Score = 90 (36.7 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 24/83 (28%), Positives = 38/83 (45%)
Query: 619 YVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCH 678
Y GH N + K L +R ++ S S+DG+ F W+ G L L VV + H
Sbjct: 229 YKGHKN--QEYKLDCCLSERDTHVVSCSEDGKVFFWDLVEGALALALPVGSGVVQSLAYH 286
Query: 679 PFD-CVVATSGIDNTIKIWTPSA 700
P + C++ G +++ W A
Sbjct: 287 PTEPCLLTAMG--GSVQCWREEA 307
Score = 71 (30.1 bits), Expect = 1.0e-06, Sum P(3) = 1.0e-06
Identities = 27/89 (30%), Positives = 45/89 (50%)
Query: 40 LSQER--ELEGHQGCVNAISWNSKGSLLIS-GSDDTHINVWSYSSRKLLHSIETGHSANV 96
L Q+R L+ QG V A+ +N G+ ++ GSD T + +W+ LL + +GH V
Sbjct: 13 LPQKRLKTLDCGQGAVRAVRFNVDGNYCLTCGSDKT-LKLWNPLRGTLLRTY-SGHGYEV 70
Query: 97 FCTKFVPETSDELVVSGAGDAEVRLFNLS 125
+ S + SG GD V L++++
Sbjct: 71 LDAAGSFDNSS--LCSGGGDKAVVLWDVA 97
Score = 68 (29.0 bits), Expect = 1.0e-06, Sum P(3) = 1.0e-06
Identities = 28/93 (30%), Positives = 40/93 (43%)
Query: 162 VVWSASEDGTLRQHDFRQGSSCPPAGSSHQECRNIL---LD--LRCGAKRSLADPPKQTL 216
V+W + +R+ FR + ++E IL +D +RC RS P QTL
Sbjct: 92 VLWDVASGQVVRK--FRGHAGKVNTVQFNEEATVILSGSIDSSIRCWDCRSRRPEPVQTL 149
Query: 217 SLKSCDISSTR--PHLLLVGGSDAFARLYDRRM 247
+SS + H +L G D R YD RM
Sbjct: 150 DEARDGVSSVKVSDHEILAGSVDGRVRRYDLRM 182
>FB|FBgn0015754 [details] [associations]
symbol:Lis-1 "Lissencephaly-1" species:7227 "Drosophila
melanogaster" [GO:0030706 "germarium-derived oocyte
differentiation" evidence=IMP] [GO:0048135 "female germ-line cyst
formation" evidence=IMP] [GO:0045478 "fusome organization"
evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP] [GO:0050790
"regulation of catalytic activity" evidence=ISS] [GO:0030234
"enzyme regulator activity" evidence=ISS] [GO:0008104 "protein
localization" evidence=IGI;IMP] [GO:0007294 "germarium-derived
oocyte fate determination" evidence=IMP] [GO:0051647 "nucleus
localization" evidence=IMP] [GO:0030716 "oocyte fate determination"
evidence=IGI] [GO:0005938 "cell cortex" evidence=IDA] [GO:0007303
"cytoplasmic transport, nurse cell to oocyte" evidence=IMP]
[GO:0045502 "dynein binding" evidence=ISS] [GO:0007312 "oocyte
nucleus migration involved in oocyte dorsal/ventral axis
specification" evidence=IMP] [GO:0030381 "chorion-containing
eggshell pattern formation" evidence=IMP] [GO:0030473 "nuclear
migration along microtubule" evidence=IGI] [GO:0008298
"intracellular mRNA localization" evidence=IMP] [GO:0030424 "axon"
evidence=IDA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0030425 "dendrite" evidence=IDA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0008088 "axon cargo transport"
evidence=IMP] [GO:0016319 "mushroom body development" evidence=IMP]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0030286 "dynein
complex" evidence=ISS;IDA] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] [GO:0007018 "microtubule-based movement"
evidence=ISS] [GO:0034501 "protein localization to kinetochore"
evidence=IMP] [GO:0005869 "dynactin complex" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0006886
"intracellular protein transport" evidence=IMP] [GO:0051299
"centrosome separation" evidence=IMP] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IGI;IMP] [GO:0051383 "kinetochore
organization" evidence=IMP] [GO:0005828 "kinetochore microtubule"
evidence=IDA] [GO:0031616 "spindle pole centrosome" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:2001019 "positive
regulation of retrograde axon cargo transport" evidence=IMP]
[GO:0048814 "regulation of dendrite morphogenesis" evidence=IMP]
[GO:0019827 "stem cell maintenance" evidence=IDA] [GO:0030510
"regulation of BMP signaling pathway" evidence=IDA] [GO:0046716
"muscle cell homeostasis" evidence=IGI;IMP] [GO:0072499
"photoreceptor cell axon guidance" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0005813 "centrosome"
evidence=IDA] [GO:0051642 "centrosome localization" evidence=IMP]
[GO:0000922 "spindle pole" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:AE013599 GO:GO:0005938
GO:GO:0007294 GO:GO:0006886 GO:GO:0030234 GO:GO:0000776
GO:GO:0007067 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008088 GO:GO:0007283 GO:GO:0051642 GO:GO:0007303
GO:GO:0048813 GO:GO:0048814 GO:GO:0046716 GO:GO:0007405
GO:GO:0016319 GO:GO:0005869 GO:GO:0030510 InterPro:IPR013720
Pfam:PF08513 GO:GO:0030473 GO:GO:0034501 GO:GO:0007093
GO:GO:0008298 GO:GO:0046843 GO:GO:0030286 GO:GO:0019827
GO:GO:0051383 GO:GO:0030723 GO:GO:0031616 GO:GO:0042623
GO:GO:0000777 GO:GO:0045502 GO:GO:0007312 GO:GO:0042052
GO:GO:0072499 GO:GO:0048142 GO:GO:0051299 GO:GO:0005828
GO:GO:0030381 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:36791 EMBL:AF152419 EMBL:AF117606
EMBL:AF098070 EMBL:AY089600 EMBL:BT021404 RefSeq:NP_001246361.1
RefSeq:NP_477160.1 RefSeq:NP_788370.1 RefSeq:NP_788371.1
RefSeq:NP_788372.1 RefSeq:NP_788373.1 RefSeq:NP_995852.1
UniGene:Dm.646 ProteinModelPortal:Q7KNS3 SMR:Q7KNS3 DIP:DIP-59474N
IntAct:Q7KNS3 MINT:MINT-774081 STRING:Q7KNS3 PaxDb:Q7KNS3
EnsemblMetazoa:FBtr0087236 EnsemblMetazoa:FBtr0087240
EnsemblMetazoa:FBtr0087241 EnsemblMetazoa:FBtr0304747 GeneID:36791
KEGG:dme:Dmel_CG8440 FlyBase:FBgn0015754 InParanoid:Q8SXJ6
OrthoDB:EOG4ZKH2S PhylomeDB:Q7KNS3 GenomeRNAi:36791 NextBio:800399
Bgee:Q7KNS3 GermOnline:CG8440 GO:GO:0043143 Uniprot:Q7KNS3
Length = 411
Score = 110 (43.8 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 28/87 (32%), Positives = 47/87 (54%)
Query: 43 ERELEGHQGCVNAISWNSKGSLLISGSDDTHINVW----SYSSRKLLHSIETGHSANVFC 98
ER L+GH V ++++++G LL S S D I +W SY K +H GH NV
Sbjct: 143 ERSLKGHTDSVQDVAFDAQGKLLASCSADLSIKLWDFQQSYECIKTMH----GHDHNVSS 198
Query: 99 TKFVPETSDELVVSGAGDAEVRLFNLS 125
FVP + + V+S + D ++++ ++
Sbjct: 199 VAFVP--AGDYVLSASRDRTIKMWEVA 223
Score = 87 (35.7 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 16/58 (27%), Positives = 27/58 (46%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW 696
G Y+ S SDD +W+ + R +K L + + H V + +D T+K+W
Sbjct: 351 GKYLVSASDDKTIRVWDLRNKRCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVKVW 408
Score = 83 (34.3 bits), Expect = 8.2e-07, Sum P(2) = 8.2e-07
Identities = 21/71 (29%), Positives = 34/71 (47%)
Query: 626 GTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVA 685
G D K+ +G ++ASGS D IW+ G + L G + V + HP +
Sbjct: 299 GADNKKGH---HQGPFLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLV 355
Query: 686 TSGIDNTIKIW 696
++ D TI++W
Sbjct: 356 SASDDKTIRVW 366
>TAIR|locus:2150788 [details] [associations]
symbol:AT5G08390 "AT5G08390" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0010090
"trichome morphogenesis" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0016926 "protein desumoylation" evidence=RCA] [GO:0042546 "cell
wall biogenesis" evidence=RCA] [GO:0044036 "cell wall macromolecule
metabolic process" evidence=RCA] [GO:0045010 "actin nucleation"
evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0080008
GO:GO:0008352 PANTHER:PTHR19845 OMA:YWERNDI IPI:IPI00533677
RefSeq:NP_568194.2 UniGene:At.10141 UniGene:At.72630
ProteinModelPortal:F4KB17 SMR:F4KB17 PRIDE:F4KB17
EnsemblPlants:AT5G08390.1 GeneID:830737 KEGG:ath:AT5G08390
Uniprot:F4KB17
Length = 839
Score = 105 (42.0 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 24/88 (27%), Positives = 46/88 (52%)
Query: 38 RRLSQERELEGHQGCVNAISWNSKGS-LLISGSDDTHINVWSYSSRKLLHSIETGHSANV 96
+R + +E H VN + K S +L++G +D +N+W+ + S+ GHS+ +
Sbjct: 4 KRAYKLQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLY-GHSSGI 62
Query: 97 FCTKFVPETSDELVVSGAGDAEVRLFNL 124
F + S+ LV +GA ++L++L
Sbjct: 63 DSVTF--DASEGLVAAGAASGTIKLWDL 88
Score = 100 (40.3 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 25/91 (27%), Positives = 42/91 (46%)
Query: 619 YVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCH 678
Y GH G ++ + + G +I SG +D +W+ G+L+ E + + H
Sbjct: 139 YKGHTR-GVNVLRFT---PDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSLDFH 194
Query: 679 PFDCVVATSGIDNTIKIWTPSASVPSIVSGG 709
P + ++AT D T+K W + I SGG
Sbjct: 195 PHEFLLATGSADKTVKFWDLE-TFELIGSGG 224
Score = 78 (32.5 bits), Expect = 5.9e-05, Sum P(2) = 5.9e-05
Identities = 19/62 (30%), Positives = 30/62 (48%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIWTP 698
G++ ASGS D IW+ + I G VN ++ P + + G DN +K+W
Sbjct: 113 GEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDL 172
Query: 699 SA 700
+A
Sbjct: 173 TA 174
>ZFIN|ZDB-GENE-050417-401 [details] [associations]
symbol:atg16l1 "ATG16 autophagy related 16-like 1
(S. cerevisiae)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-050417-401 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GeneTree:ENSGT00700000104505
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013923 Pfam:PF08614
EMBL:CABZ01067234 EMBL:CABZ01067235 EMBL:CABZ01067236
EMBL:CABZ01067237 EMBL:CABZ01067238 EMBL:CU672237 IPI:IPI00995960
ProteinModelPortal:F1QGM8 Ensembl:ENSDART00000122085 Bgee:F1QGM8
Uniprot:F1QGM8
Length = 605
Score = 118 (46.6 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 34/133 (25%), Positives = 66/133 (49%)
Query: 39 RLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFC 98
R + L G + +I ++S GS L++ S+D +W+ +L H++ TGHS V
Sbjct: 350 RCEPKGALTGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTL-TGHSGKVLS 408
Query: 99 TKFVPETSDELVVSGAGDAEVRLFNL-SR-------FSGRGLDDNAITPSALYQCH-TRR 149
+F+ + + +VSG+ D ++L++L S+ F+G +D T + H ++
Sbjct: 409 ARFLLDNAR--IVSGSYDRTLKLWDLRSKVCSMKTVFAGSSCNDIVCTEQCVMSGHFDKK 466
Query: 150 VKKLAVEVGNPHV 162
V+ + N H+
Sbjct: 467 VRFWDISYQNYHI 479
Score = 83 (34.3 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 21/73 (28%), Positives = 36/73 (49%)
Query: 626 GTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKML-LGDEAVVNCVQCHPFDCVV 684
G+D + +F G ++A+GS DG ++W TG+L K L G + +N V V
Sbjct: 532 GSDFTRVTF-SPDGSFVAAGSADGVLYLWNVLTGKLEKTLDKGHSSAINSVSWSLSGAFV 590
Query: 685 ATSGIDNTIKIWT 697
A+ + +W+
Sbjct: 591 ASVEKGSKAVLWS 603
Score = 52 (23.4 bits), Expect = 0.00049, Sum P(2) = 0.00049
Identities = 18/53 (33%), Positives = 26/53 (49%)
Query: 283 THVTFSPNGEEVLLSYSGEHVYLMDVNHAGGRAMRYTVGDASKIMSFTPTLNG 335
T VTFSP+G V + +YL +V G G +S I S + +L+G
Sbjct: 536 TRVTFSPDGSFVAAGSADGVLYLWNVL-TGKLEKTLDKGHSSAINSVSWSLSG 587
>ZFIN|ZDB-GENE-040116-2 [details] [associations]
symbol:pafah1b1a "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit a" species:7955 "Danio
rerio" [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0048854 "brain
morphogenesis" evidence=IGI;IMP] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0005815 "microtubule
organizing center" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-2 GO:GO:0005737
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815
InterPro:IPR013720 Pfam:PF08513 GO:GO:0005874 GO:GO:0048854
EMBL:DQ141217 EMBL:BX324162 EMBL:BC053205 IPI:IPI00500448
RefSeq:NP_958502.1 UniGene:Dr.140597 ProteinModelPortal:Q7T394
SMR:Q7T394 STRING:Q7T394 PRIDE:Q7T394 Ensembl:ENSDART00000042218
GeneID:394246 KEGG:dre:394246 CTD:394246
GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
NextBio:20815155 Bgee:Q7T394 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 Uniprot:Q7T394
Length = 410
Score = 105 (42.0 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 36/156 (23%), Positives = 71/156 (45%)
Query: 37 VRRLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANV 96
+ R ++ L GH+ V + ++ S+++S S+D I VW + + +++ GH+ +V
Sbjct: 95 IPRPPEKYALSGHRSPVTRVIFHPVFSVIVSASEDATIKVWDHETGDFERTLK-GHTDSV 153
Query: 97 FCTKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVE 156
F + + +L+ S + D ++L++ F I H V +A+
Sbjct: 154 QDISF--DHTGKLLASCSADMTIKLWDFQGFE-------CIRTM---HGHDHNVSSVAIM 201
Query: 157 VGNPHVVWSASEDGTLRQHDFRQGSSCPPAGSSHQE 192
H+V SAS D T++ + G C + H+E
Sbjct: 202 PNGDHIV-SASRDKTIKMWEVATGY-CVKTFTGHRE 235
Score = 92 (37.4 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 20/58 (34%), Positives = 27/58 (46%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW 696
G YI S +DD IW+ + R K L E V + H V T +D T+K+W
Sbjct: 350 GKYIVSCADDKTLRIWDYKNKRCTKTLSAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 86 (35.3 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 20/71 (28%), Positives = 36/71 (50%)
Query: 626 GTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVA 685
G++ K++ G+ G ++ SGS D +W+ G + L+G + V V HP +
Sbjct: 298 GSETKKS---GKPGPFLLSGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGVLVHPGGKYIV 354
Query: 686 TSGIDNTIKIW 696
+ D T++IW
Sbjct: 355 SCADDKTLRIW 365
>ZFIN|ZDB-GENE-031118-54 [details] [associations]
symbol:poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0060287 "epithelial cilium movement involved in determination
of left/right asymmetry" evidence=IMP] [GO:0060271 "cilium
morphogenesis" evidence=IMP] [GO:0003014 "renal system process"
evidence=IMP] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-031118-54 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042384 GO:GO:0003014
GO:GO:0060287 EMBL:CT033837 GeneTree:ENSGT00700000104282
HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743 EMBL:AY422998
EMBL:CR405685 EMBL:BC055275 IPI:IPI00506502 RefSeq:NP_956412.1
UniGene:Dr.26707 ProteinModelPortal:A2CEH0
Ensembl:ENSDART00000004771 GeneID:386932 KEGG:dre:386932 CTD:282809
InParanoid:Q6TEQ1 OMA:DENQEER OrthoDB:EOG41VK2R NextBio:20814079
Bgee:A2CEH0 Uniprot:A2CEH0
Length = 490
Score = 110 (43.8 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 24/79 (30%), Positives = 41/79 (51%)
Query: 47 EGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPETS 106
+ H V ++ ++ G L++ SDD + VW +K L+S+ H+ V C +F P+
Sbjct: 99 KAHTASVRSVHFSRDGQRLVTASDDKSVKVWGVERKKFLYSLNR-HTNWVRCARFSPD-- 155
Query: 107 DELVVSGAGDAEVRLFNLS 125
L+ S D VRL++ S
Sbjct: 156 GRLIASCGDDRTVRLWDTS 174
Score = 97 (39.2 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 33/140 (23%), Positives = 63/140 (45%)
Query: 34 SSLVRRLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHS 93
+S++ + ER +GH+ ++ +N L +GS D + +W+ + + GH+
Sbjct: 2 ASVMEDPTLERHFKGHKDVISCADFNPNNKQLATGSCDKSLMIWNLAPKARAFRF-VGHT 60
Query: 94 ANVFCTKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKL 153
+ F P S LV S + D VRL+ S G S +++ HT V+ +
Sbjct: 61 DVITGVNFAP--SGSLVASSSRDQTVRLWTPS-IKGE---------STVFKAHTASVRSV 108
Query: 154 AVEVGNPHVVWSASEDGTLR 173
+V +AS+D +++
Sbjct: 109 HFSRDGQRLV-TASDDKSVK 127
Score = 88 (36.0 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 26/75 (34%), Positives = 36/75 (48%)
Query: 624 NVGTDIK-QASFL--GQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPF 680
N+ TD A+F+ G IAS D IW+ +T +LI+ A VNC HP
Sbjct: 180 NIFTDYGGSATFVDFNSSGTCIASSGADNTIKIWDIRTNKLIQHYKVHNAGVNCFSFHPS 239
Query: 681 DCVVATSGIDNTIKI 695
+ + D+TIKI
Sbjct: 240 GNYLISGSSDSTIKI 254
Score = 79 (32.9 bits), Expect = 8.7e-05, Sum P(2) = 8.7e-05
Identities = 21/81 (25%), Positives = 37/81 (45%)
Query: 616 KQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCV 675
+++++ N T+ + + G IAS DD +W+ + + I + V
Sbjct: 133 RKKFLYSLNRHTNWVRCARFSPDGRLIASCGDDRTVRLWDTSSHQCINIFTDYGGSATFV 192
Query: 676 QCHPFDCVVATSGIDNTIKIW 696
+ +A+SG DNTIKIW
Sbjct: 193 DFNSSGTCIASSGADNTIKIW 213
Score = 71 (30.1 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 20/76 (26%), Positives = 36/76 (47%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW-T 697
G + + SDD +W + + + L V C + P ++A+ G D T+++W T
Sbjct: 114 GQRLVTASDDKSVKVWGVERKKFLYSLNRHTNWVRCARFSPDGRLIASCGDDRTVRLWDT 173
Query: 698 PSASVPSIVS--GGAA 711
S +I + GG+A
Sbjct: 174 SSHQCINIFTDYGGSA 189
>UNIPROTKB|C3UJQ7 [details] [associations]
symbol:TBL1Y "Transducin (Beta)-like 1 Y-linked"
species:9593 "Gorilla gorilla" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] [GO:0007605 "sensory perception of
sound" evidence=ISS] [GO:0008013 "beta-catenin binding"
evidence=ISS] [GO:0017053 "transcriptional repressor complex"
evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0006508 GO:GO:0000122 GO:GO:0007605 InterPro:IPR013720
Pfam:PF08513 GO:GO:0042393 GO:GO:0008013 GO:GO:0060070
GO:GO:0005876 HOGENOM:HOG000220902 EMBL:FJ532265
ProteinModelPortal:C3UJQ7 Uniprot:C3UJQ7
Length = 524
Score = 138 (53.6 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 39/135 (28%), Positives = 66/135 (48%)
Query: 2 ENFPFHDGSIYDMLDTRHTDTRPDVNHSLQMHSSLVRRLSQE---RELEGHQGCVNAISW 58
+ FPFH D+ D ++ T + +H V RL + + +GH VNAI W
Sbjct: 312 QQFPFHSAPALDV-DWQNNTTFASCGTDMCIH---VCRLGCDLPVKTFQGHTNEVNAIKW 367
Query: 59 NSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPE---TSDE----LVV 111
+ G LL S SDD + +WS +H ++ HS ++ K+ P TS+ ++
Sbjct: 368 DPSGMLLASCSDDMTLKIWSMKQDACVHDLQA-HSKEIYTIKWSPTGPATSNPNSSIMLA 426
Query: 112 SGAGDAEVRLFNLSR 126
S + D+ VRL+++ +
Sbjct: 427 SASFDSTVRLWDVEQ 441
Score = 59 (25.8 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 13/29 (44%), Positives = 16/29 (55%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLG 667
G Y+ASGS D IW Q+G L+ G
Sbjct: 464 GKYLASGSFDKCVHIWNTQSGSLVHSYQG 492
Score = 53 (23.7 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 16/62 (25%), Positives = 26/62 (41%)
Query: 642 IASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW-TPSA 700
+AS S D +W+ + G L + V + P +A+ D + IW T S
Sbjct: 425 LASASFDSTVRLWDVEQGVCTHTLTKHQEPVYSIAFSPDGKYLASGSFDKCVHIWNTQSG 484
Query: 701 SV 702
S+
Sbjct: 485 SL 486
>UNIPROTKB|Q9BQ87 [details] [associations]
symbol:TBL1Y "F-box-like/WD repeat-containing protein
TBL1Y" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 InterPro:IPR013720
Pfam:PF08513 KO:K04508 HOGENOM:HOG000220902 HOVERGEN:HBG050240
OrthoDB:EOG412M5M EMBL:AF332220 EMBL:AF332221 EMBL:AF332222
EMBL:CH471163 EMBL:BC130471 EMBL:BC130473 IPI:IPI00020873
RefSeq:NP_150600.1 RefSeq:NP_599020.1 RefSeq:NP_599021.1
UniGene:Hs.664560 ProteinModelPortal:Q9BQ87 SMR:Q9BQ87
STRING:Q9BQ87 PhosphoSite:Q9BQ87 DMDM:23396873 PaxDb:Q9BQ87
PRIDE:Q9BQ87 Ensembl:ENST00000346432 Ensembl:ENST00000355162
Ensembl:ENST00000383032 GeneID:90665 KEGG:hsa:90665 UCSC:uc004frb.3
CTD:90665 GeneCards:GC0YP006778 HGNC:HGNC:18502 MIM:400033
neXtProt:NX_Q9BQ87 PharmGKB:PA38564 InParanoid:Q9BQ87 OMA:VHSYQGT
PhylomeDB:Q9BQ87 GenomeRNAi:90665 NextBio:76909 ArrayExpress:Q9BQ87
Bgee:Q9BQ87 CleanEx:HS_TBL1Y Genevestigator:Q9BQ87
GermOnline:ENSG00000092377 Uniprot:Q9BQ87
Length = 522
Score = 137 (53.3 bits), Expect = 4.6e-07, Sum P(2) = 4.6e-07
Identities = 36/132 (27%), Positives = 64/132 (48%)
Query: 2 ENFPFHDGSIYDMLDTRHTDTRPDVNHSLQMHSSLVRRLSQERELEGHQGCVNAISWNSK 61
+ FPFH D+ D ++ T + + +H + + +GH VNAI W+
Sbjct: 312 QQFPFHSAPALDV-DWQNNMTFASCSTDMCIHVCRLGCDHPVKTFQGHTNEVNAIKWDPS 370
Query: 62 GSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPE---TSDE----LVVSGA 114
G LL S SDD + +WS +H ++ HS ++ K+ P TS+ ++ S +
Sbjct: 371 GMLLASCSDDMTLKIWSMKQDACVHDLQA-HSKEIYTIKWSPTGPATSNPNSSIMLASAS 429
Query: 115 GDAEVRLFNLSR 126
D+ VRL+++ +
Sbjct: 430 FDSTVRLWDVEQ 441
Score = 60 (26.2 bits), Expect = 4.6e-07, Sum P(2) = 4.6e-07
Identities = 13/29 (44%), Positives = 16/29 (55%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLG 667
G Y+ASGS D IW Q+G L+ G
Sbjct: 464 GKYLASGSFDKYVHIWNTQSGSLVHSYQG 492
Score = 56 (24.8 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 17/62 (27%), Positives = 27/62 (43%)
Query: 642 IASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW-TPSA 700
+AS S D +W+ + G L+ + V V P +A+ D + IW T S
Sbjct: 425 LASASFDSTVRLWDVEQGVCTHTLMKHQEPVYSVAFSPDGKYLASGSFDKYVHIWNTQSG 484
Query: 701 SV 702
S+
Sbjct: 485 SL 486
>TAIR|locus:2037798 [details] [associations]
symbol:PWP2 "AT1G15440" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0006406 "mRNA export from nucleus"
evidence=RCA] [GO:0006606 "protein import into nucleus"
evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0006364 "rRNA processing" evidence=IMP] [GO:0009553 "embryo sac
development" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0080008 HSSP:Q04724
HOGENOM:HOG000160363 KO:K14558 OMA:VWQCDTP InterPro:IPR027145
InterPro:IPR007148 PANTHER:PTHR19858 Pfam:PF04003 EMBL:AY065425
EMBL:AY133789 IPI:IPI00543736 RefSeq:NP_172998.1 UniGene:At.28488
ProteinModelPortal:Q8VYZ5 SMR:Q8VYZ5 STRING:Q8VYZ5 PaxDb:Q8VYZ5
PRIDE:Q8VYZ5 EnsemblPlants:AT1G15440.1 GeneID:838115
KEGG:ath:AT1G15440 TAIR:At1g15440 InParanoid:Q8VYZ5
PhylomeDB:Q8VYZ5 ProtClustDB:CLSN2679476 ArrayExpress:Q8VYZ5
Genevestigator:Q8VYZ5 Uniprot:Q8VYZ5
Length = 900
Score = 105 (42.0 bits), Expect = 4.9e-07, Sum P(2) = 4.9e-07
Identities = 22/64 (34%), Positives = 38/64 (59%)
Query: 639 GDYIASGS-DDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIWT 697
GD + +G+ D F+W K+TG++ +L G EA V+ + P ++A+S D T+++W
Sbjct: 486 GDVVCAGTLDSFEIFVWSKKTGQIKDILSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWD 545
Query: 698 PSAS 701
AS
Sbjct: 546 VFAS 549
Score = 99 (39.9 bits), Expect = 4.9e-07, Sum P(2) = 4.9e-07
Identities = 36/123 (29%), Positives = 61/123 (49%)
Query: 58 WNSKGSLLISGSDDT-HINVWSYSSRKLLHSIETGHSANVFCTKFVPETSDELVVSGAGD 116
+N +G+ L G + VW + + + + GH +V C + P++ +L+ +GA D
Sbjct: 354 FNERGNWLTFGCAKLGQLLVWDWRTETYILK-QQGHYFDVNCVTYSPDS--QLLATGADD 410
Query: 117 AEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHVVWSASEDGTLRQHD 176
+V+++N+ SG IT + HT V L N H + SAS DGT+R D
Sbjct: 411 NKVKVWNV--MSGTCF----IT----FTEHTNAVTALHFMADN-HSLLSASLDGTVRAWD 459
Query: 177 FRQ 179
F++
Sbjct: 460 FKR 462
Score = 86 (35.3 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 21/81 (25%), Positives = 40/81 (49%)
Query: 47 EGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPETS 106
+GH VN ++++ LL +G+DD + VW+ S + T H+ V F+ +
Sbjct: 386 QGHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITF-TEHTNAVTALHFMADNH 444
Query: 107 DELVVSGAGDAEVRLFNLSRF 127
++S + D VR ++ R+
Sbjct: 445 S--LLSASLDGTVRAWDFKRY 463
Score = 74 (31.1 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 20/87 (22%), Positives = 39/87 (44%)
Query: 51 GCVNAIS-WNSKGSLLISGSDDTHINVWSYSSRKL-LHSIETGHSANVFCTKFVPETSDE 108
GC + +K + + + D +I W Y+ + + + E GHS + P+ +DE
Sbjct: 192 GCFFGVDKMTNKVNRAFTIARDGYIFSWGYTEKDVKMDESEDGHSEPP--SPVTPDRADE 249
Query: 109 LVVSGAGDAEVRLFNLSRFSGRGLDDN 135
++V G L + G+GL+ +
Sbjct: 250 VMVENGGGVGTELKKRKEYDGKGLESD 276
>FB|FBgn0036733 [details] [associations]
symbol:U4-U6-60K "U4-U6 small nuclear riboprotein factor 60K"
species:7227 "Drosophila melanogaster" [GO:0005688 "U6 snRNP"
evidence=ISS] [GO:0005687 "U4 snRNP" evidence=ISS] [GO:0008380 "RNA
splicing" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0030532 "small nuclear ribonucleoprotein complex"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;ISS] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0030621 "U4 snRNA binding" evidence=IDA] [GO:0017070 "U6 snRNA
binding" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0030532
GO:GO:0017070 GO:GO:0030621 InterPro:IPR014906 Pfam:PF08799
KO:K12662 GeneTree:ENSGT00690000101787 OMA:CKIWDLR HSSP:O43172
EMBL:AY061623 RefSeq:NP_648990.1 UniGene:Dm.987 SMR:Q9VVI0
MINT:MINT-295539 STRING:Q9VVI0 EnsemblMetazoa:FBtr0075209
GeneID:39955 KEGG:dme:Dmel_CG6322 UCSC:CG6322-RA CTD:39955
FlyBase:FBgn0036733 InParanoid:Q9VVI0 OrthoDB:EOG4R7SRZ
GenomeRNAi:39955 NextBio:816257 Uniprot:Q9VVI0
Length = 553
Score = 100 (40.3 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 23/79 (29%), Positives = 40/79 (50%)
Query: 622 HCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFD 681
H N+ +D+K + + G ++ + S D IW +T + +K L G + V V P
Sbjct: 478 HTNLISDVK---YQQECGSFLVTCSYDSTTKIWSNKTWQPLKTLQGHDNKVISVDIAPNS 534
Query: 682 CVVATSGIDNTIKIWTPSA 700
+AT+ D T K+W+P +
Sbjct: 535 QYIATTSFDRTFKLWSPDS 553
Score = 99 (39.9 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 27/90 (30%), Positives = 47/90 (52%)
Query: 40 LSQEREL---EGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANV 96
L Q+ E+ EGH V+ +S++S GS+L++G D VW + + + +E GH V
Sbjct: 382 LEQKTEVLHQEGHAKPVHCLSYHSDGSVLVTGGLDAFGRVWDLRTGRCIMFLE-GHLGAV 440
Query: 97 FCTKFVPETSDELVVSGAGDAEVRLFNLSR 126
F F P + +G+ D ++++L R
Sbjct: 441 FGVDFSPNGFH--IATGSQDNTCKIWDLRR 468
>ASPGD|ASPL0000055088 [details] [associations]
symbol:AN10058 species:162425 "Emericella nidulans"
[GO:0000027 "ribosomal large subunit assembly" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:BN001308 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 HOGENOM:HOG000091641 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 ProteinModelPortal:C8VTS6
EnsemblFungi:CADANIAT00002342 Uniprot:C8VTS6
Length = 518
Score = 104 (41.7 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 46/186 (24%), Positives = 89/186 (47%)
Query: 8 DGSIYDML-DTRHTDTRPDVN---HSLQMHSS-----LVRRLSQ-ERELEGHQGCVNAIS 57
D D+L D H+ +P V ++Q++ + V+ +S+ + GH + A S
Sbjct: 96 DSQTIDILADIYHSLLKPGVKTTEDTIQLYFTPQAIFRVKAVSRCSASIAGHGEAILATS 155
Query: 58 WNS-KGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPETSDELVVSGAGD 116
++ S ++SGS D+ +W + LH+++ GH++ V + P + ++ +G+ D
Sbjct: 156 FSPVSSSTMVSGSGDSTARIWDCDTGTPLHTLK-GHTSWVLAVSYSPNGA--MIATGSMD 212
Query: 117 AEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEV------GNPHVVWSASEDG 170
VR+++ + G+ L A + H + + LA E G+P + SAS+D
Sbjct: 213 NTVRIWDAKK--GQAL-------GAPLKGHVKWITSLAWEPYHLQQSGHPRLA-SASKDS 262
Query: 171 TLRQHD 176
T+R D
Sbjct: 263 TVRIWD 268
Score = 94 (38.1 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 20/68 (29%), Positives = 37/68 (54%)
Query: 630 KQASFLGQRGDYIASGSDDGRWFIWEKQTG-RLIKMLLGDEAVVNCVQCHPFDCVVATSG 688
K A+ + + + S SDD ++W+ ++ + + LLG + VN V P +A++G
Sbjct: 365 KAATINNKIVEKLVSASDDFTMYLWDPESSSKPVARLLGHQKEVNHVTFSPDMAYIASAG 424
Query: 689 IDNTIKIW 696
DN +K+W
Sbjct: 425 FDNHVKLW 432
Score = 82 (33.9 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 19/64 (29%), Positives = 29/64 (45%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIET-GHSAN--VFCTKFV 102
L GH+G V + W G + S D T I VW+ + L+ ++ H N T F+
Sbjct: 278 LSGHKGSVTCVRWGGTGKIYTSSHDRT-IKVWNSQTGTLIQTLSAHAHRVNHLALSTDFI 336
Query: 103 PETS 106
T+
Sbjct: 337 LRTA 340
Score = 81 (33.6 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 26/92 (28%), Positives = 40/92 (43%)
Query: 607 YQPETVIDMKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLL 666
+ PE+ R +GH ++ +F YIAS D +W + G+ I L
Sbjct: 389 WDPESSSKPVARLLGHQK---EVNHVTFSPDMA-YIASAGFDNHVKLWNGRDGKFITTLR 444
Query: 667 GDE-AVVNCVQCHPFDC-VVATSGIDNTIKIW 696
G AV C C D ++ +S D T+K+W
Sbjct: 445 GHVGAVYQC--CFSADSRLLVSSSKDTTLKVW 474
Score = 80 (33.2 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 19/83 (22%), Positives = 42/83 (50%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP-- 103
L+GH V A+S++ G+++ +GS D + +W + L + GH + + P
Sbjct: 187 LKGHTSWVLAVSYSPNGAMIATGSMDNTVRIWDAKKGQALGAPLKGHVKWITSLAWEPYH 246
Query: 104 --ETSDELVVSGAGDAEVRLFNL 124
++ + S + D+ VR++++
Sbjct: 247 LQQSGHPRLASASKDSTVRIWDV 269
Score = 72 (30.4 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 24/76 (31%), Positives = 33/76 (43%)
Query: 621 GHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPF 680
GH VG + Q F + S S D +W +TG+L + L G + V V P
Sbjct: 445 GH--VGA-VYQCCFSAD-SRLLVSSSKDTTLKVWNVRTGKLSEDLPGHKDEVFAVDWSPD 500
Query: 681 DCVVATSGIDNTIKIW 696
V + G D I+IW
Sbjct: 501 GQKVGSGGKDKAIRIW 516
Score = 39 (18.8 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 282 LTHVTFSPNGEEVLLSYSGEHVYL 305
+ HVTFSP+ + + HV L
Sbjct: 408 VNHVTFSPDMAYIASAGFDNHVKL 431
>ASPGD|ASPL0000017294 [details] [associations]
symbol:AN3926 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0051568 "histone H3-K4 methylation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001302 EMBL:AACD01000064 KO:K14963 OrthoDB:EOG49CTJ0
RefSeq:XP_661530.1 ProteinModelPortal:Q5B6A4
EnsemblFungi:CADANIAT00004769 GeneID:2873346 KEGG:ani:AN3926.2
HOGENOM:HOG000215221 OMA:VHEDNPP Uniprot:Q5B6A4
Length = 522
Score = 116 (45.9 bits), Expect = 5.3e-07, Sum P(3) = 5.3e-07
Identities = 25/79 (31%), Positives = 46/79 (58%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L GH V+A+ ++ S++ SG D + VW+ S+ KL+++ E GH A + + P+
Sbjct: 172 LRGHLRGVSAVRFSPDASMIASGGADGAVKVWAASTGKLIYTFE-GHLAGISTISWSPDG 230
Query: 106 SDELVVSGAGDAEVRLFNL 124
+ + SG+ D +RL+N+
Sbjct: 231 AT--IASGSDDKTIRLWNV 247
Score = 113 (44.8 bits), Expect = 1.1e-06, Sum P(3) = 1.1e-06
Identities = 26/78 (33%), Positives = 44/78 (56%)
Query: 47 EGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPETS 106
EGH ++ ISW+ G+ + SGSDD I +W+ + K + GH V+ F P+ +
Sbjct: 215 EGHLAGISTISWSPDGATIASGSDDKTIRLWNVLTGKAHPTPFIGHHNYVYAIAFSPKGN 274
Query: 107 DELVVSGAGDAEVRLFNL 124
++VSG+ D V L+++
Sbjct: 275 --MLVSGSYDEAVFLWDV 290
Score = 95 (38.5 bits), Expect = 9.1e-05, Sum P(3) = 9.1e-05
Identities = 26/78 (33%), Positives = 44/78 (56%)
Query: 48 GHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPETSD 107
GH V AI+++ KG++L+SGS D + +W S +++ S+ HS V V + +
Sbjct: 259 GHHNYVYAIAFSPKGNMLVSGSYDEAVFLWDVRSARVMKSLPA-HSDPVSGIDVVWDGT- 316
Query: 108 ELVVSGAGDAEVRLFNLS 125
L+ S A D VR+++ S
Sbjct: 317 -LIASCATDGLVRIWDTS 333
Score = 80 (33.2 bits), Expect = 7.5e-07, Sum P(2) = 7.5e-07
Identities = 20/81 (24%), Positives = 40/81 (49%)
Query: 619 YVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCH 678
++GH N + +F +G+ + SGS D F+W+ ++ R++K L V+ +
Sbjct: 257 FIGHHNY---VYAIAF-SPKGNMLVSGSYDEAVFLWDVRSARVMKSLPAHSDPVSGIDVV 312
Query: 679 PFDCVVATSGIDNTIKIWTPS 699
++A+ D ++IW S
Sbjct: 313 WDGTLIASCATDGLVRIWDTS 333
Score = 73 (30.8 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 18/59 (30%), Positives = 31/59 (52%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLG-DEAVVNCVQCHPFDCVVATSGIDNTIKIW 696
G IAS + DG IW+ TG+ ++ L+ D V+ V+ P V +D+ +++W
Sbjct: 315 GTLIASCATDGLVRIWDTSTGQCLRTLVHEDNPPVSSVKFSPNGKYVLAWTLDDCVRLW 373
Score = 71 (30.1 bits), Expect = 5.3e-07, Sum P(3) = 5.3e-07
Identities = 15/58 (25%), Positives = 31/58 (53%)
Query: 641 YIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQ-CHPFDC-VVATSGIDNTIKIW 696
+ SGS+DG W+ T ++++ + + VV V C + + + G+D T+++W
Sbjct: 414 FAVSGSEDGAILCWDVVTKKVLQRIEAHDGVVLGVDTCSTGEGRFMVSCGLDGTVRVW 471
Score = 52 (23.4 bits), Expect = 5.3e-07, Sum P(3) = 5.3e-07
Identities = 16/49 (32%), Positives = 26/49 (53%)
Query: 282 LTHVTFSPNGEEVLLSYSGEHVYLMDVNHAGGRAMRYTVGDASKIMSFT 330
++ V FSPNG+ VL + V L D + GR ++ G ++K S +
Sbjct: 349 VSSVKFSPNGKYVLAWTLDDCVRLWD--YVEGRCLKTYQGHSNKKYSLS 395
Score = 46 (21.3 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 285 VTFSPNGEEVLLSYSGEHVYLMDVNHAGGRAMR 317
+ FSP G ++ E V+L DV A R M+
Sbjct: 267 IAFSPKGNMLVSGSYDEAVFLWDVRSA--RVMK 297
>POMBASE|SPAC343.04c [details] [associations]
symbol:SPAC343.04c "WD repeat protein, human WDR26
family, ubiquitin ligase complex subunit (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
[GO:0034657 "GID complex" evidence=ISO] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0044732 "mitotic spindle pole body" evidence=IDA] [GO:0045721
"negative regulation of gluconeogenesis" evidence=ISO] [GO:0010969
"regulation of pheromone-dependent signal transduction involved in
conjugation with cellular fusion" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 PomBase:SPAC343.04c GO:GO:0005829
GO:GO:0005634 EMBL:CU329670 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0044732
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045721
HSSP:P16649 PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
GO:GO:0034657 OrthoDB:EOG43R6WJ HOGENOM:HOG000160946 OMA:IRGQFYQ
PIR:T38653 RefSeq:NP_593424.1 ProteinModelPortal:Q9UT85
EnsemblFungi:SPAC343.04c.1 GeneID:2543079 KEGG:spo:SPAC343.04c
NextBio:20804107 Uniprot:Q9UT85
Length = 507
Score = 133 (51.9 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 28/82 (34%), Positives = 50/82 (60%)
Query: 617 QRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQ 676
++Y+GH +G + + F G+ ++ SGS+D + IW +++G+L+ L G VN V
Sbjct: 419 RQYMGH-KLGNFLIGSCFGGKDDTFVLSGSEDDKIRIWHRESGKLLATLSGHVKCVNYVA 477
Query: 677 CHPFDCV-VATSGIDNTIKIWT 697
+P D A++G DNT++IW+
Sbjct: 478 YNPVDPYQFASAGDDNTVRIWS 499
Score = 63 (27.2 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 22/90 (24%), Positives = 42/90 (46%)
Query: 37 VRRLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVW-SYSSRKLLHSIETGHSAN 95
V L + L GH V I W+ L+S S D + +W +++ KL + H +
Sbjct: 242 VVNLKRVFRLIGHIDTVAYIRWSPDDRYLLSCSCDKSVILWDAFTGEKLR---DYKHGFS 298
Query: 96 VFCTKFVPETSDELVVSGAGDAEVRLFNLS 125
V C ++P+ ++G+ D + ++L+
Sbjct: 299 VSCCCWLPDGLS--FITGSPDCHITHWSLN 326
Score = 60 (26.2 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 27/134 (20%), Positives = 54/134 (40%)
Query: 49 HQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPETSDE 108
H V+ W G I+GS D HI WS + ++L+ E N++ + +
Sbjct: 295 HGFSVSCCCWLPDGLSFITGSPDCHITHWSLNG-EILYKWE---DVNIYDMALTSDGTKL 350
Query: 109 LVVS-----GAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHV- 162
+V A D + ++++ + + ++ C ++ K A+ PH
Sbjct: 351 YIVGFEQLINAEDKHIAIYSVE--TRECIKKISLQSKVTSICLSKD-SKYALTNLEPHTT 407
Query: 163 -VWSASEDGTLRQH 175
+W E+ +RQ+
Sbjct: 408 FLWDLEENRIVRQY 421
>FB|FBgn0021874 [details] [associations]
symbol:Nle "Notchless" species:7227 "Drosophila melanogaster"
[GO:0007219 "Notch signaling pathway" evidence=ISS;TAS] [GO:0005112
"Notch binding" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005634 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0005112 GeneTree:ENSGT00690000102167 InterPro:IPR011047
SUPFAM:SSF50998 HSSP:P16649 PRINTS:PR00319 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 FlyBase:FBgn0021874 EMBL:AY089286
RefSeq:NP_477294.2 UniGene:Dm.13475 SMR:Q9VPR4 IntAct:Q9VPR4
MINT:MINT-291987 STRING:Q9VPR4 EnsemblMetazoa:FBtr0078075
GeneID:33234 KEGG:dme:Dmel_CG2863 UCSC:CG2863-RA CTD:33234
InParanoid:Q9VPR4 GenomeRNAi:33234 NextBio:782583 Uniprot:Q9VPR4
Length = 488
Score = 120 (47.3 bits), Expect = 0.00078, P = 0.00078
Identities = 25/75 (33%), Positives = 42/75 (56%)
Query: 48 GHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPETSD 107
GH V ++W++ L++SGS D+ + VWS ++KL + GH+ VF + P+ S
Sbjct: 415 GHVQAVYTVAWSADSRLIVSGSKDSTLKVWSVQTKKLAQELP-GHADEVFGVDWAPDGSR 473
Query: 108 ELVVSGAGDAEVRLF 122
V SG D ++L+
Sbjct: 474 --VASGGKDKVIKLW 486
Score = 105 (42.0 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 47/187 (25%), Positives = 80/187 (42%)
Query: 48 GHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPETSD 107
GH+ V +SW G L SG I +W + + +GH ++ C + P D
Sbjct: 159 GHKQWVLCVSWAPDGKRLASGCKAGSIIIWDPETGQQKGRPLSGHKKHINCLAWEPYHRD 218
Query: 108 ---ELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHVVW 164
+ S +GD + R++++ G+ L + A HT V AV G +++
Sbjct: 219 PECRKLASASGDGDCRIWDVKL--GQCLMNIA--------GHTNAVT--AVRWGGAGLIY 266
Query: 165 SASEDGTLRQHDFRQGSSCPP-AGSSHQECRNILLD----LRCGAKRSLADPPKQTLSLK 219
++S+D T++ G C +G +H NI L LR G + D K LSL
Sbjct: 267 TSSKDRTVKMWRAADGILCRTFSGHAHW-VNNIALSTDYVLRTGPFHPVKDRSKSHLSLS 325
Query: 220 SCDISST 226
+ ++ +
Sbjct: 326 TEELQES 332
Score = 100 (40.3 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 27/97 (27%), Positives = 48/97 (49%)
Query: 10 SIYDMLDTRHTDTRPDVNHSLQMHSSL-VRRLSQ-ERELEGHQGCVNAISWNSKGSLLIS 67
S+ D LD DT ++ Q + VR +++ + GH V +++++ G+ L S
Sbjct: 77 SLEDTLDLASVDTENVIDIVYQPQAVFKVRPVTRCTSSMPGHAEAVVSLNFSPDGAHLAS 136
Query: 68 GSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPE 104
GS DT + +W ++ + H TGH V C + P+
Sbjct: 137 GSGDTTVRLWDLNT-ETPHFTCTGHKQWVLCVSWAPD 172
Score = 92 (37.4 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 22/92 (23%), Positives = 45/92 (48%)
Query: 615 MKQRYVGHCNVGTDIKQASFLGQ-------RGDYIASGSDDGRWFIWEKQTGRLIKMLLG 667
+K R H ++ T+ Q S L + + + S SDD ++W + ++ + G
Sbjct: 314 VKDRSKSHLSLSTEELQESALKRYQAVCPDEVESLVSCSDDNTLYLWRNNQNKCVERMTG 373
Query: 668 DEAVVNCVQCHPFDCVVATSGIDNTIKIWTPS 699
+ VVN V+ P ++A++ D ++++W S
Sbjct: 374 HQNVVNDVKYSPDVKLIASASFDKSVRLWRAS 405
Score = 79 (32.9 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 21/55 (38%), Positives = 26/55 (47%)
Query: 642 IASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW 696
I SGS D +W QT +L + L G V V P VA+ G D IK+W
Sbjct: 432 IVSGSKDSTLKVWSVQTKKLAQELPGHADEVFGVDWAPDGSRVASGGKDKVIKLW 486
Score = 74 (31.1 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 21/81 (25%), Positives = 35/81 (43%)
Query: 617 QRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQ 676
+R GH NV D+K + + IAS S D +W G+ + G V V
Sbjct: 369 ERMTGHQNVVNDVKYSPDV----KLIASASFDKSVRLWRASDGQYMATFRGHVQAVYTVA 424
Query: 677 CHPFDCVVATSGIDNTIKIWT 697
++ + D+T+K+W+
Sbjct: 425 WSADSRLIVSGSKDSTLKVWS 445
Score = 72 (30.4 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 20/65 (30%), Positives = 33/65 (50%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLI-KMLLGDEAVVNCVQCHPF----DC--VVATSGIDN 691
G +ASG G IW+ +TG+ + L G + +NC+ P+ +C + + SG D
Sbjct: 173 GKRLASGCKAGSIIIWDPETGQQKGRPLSGHKKHINCLAWEPYHRDPECRKLASASG-DG 231
Query: 692 TIKIW 696
+IW
Sbjct: 232 DCRIW 236
Score = 71 (30.1 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 17/55 (30%), Positives = 28/55 (50%)
Query: 642 IASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW 696
+AS S DG IW+ + G+ + + G V V+ ++ TS D T+K+W
Sbjct: 224 LASASGDGDCRIWDVKLGQCLMNIAGHTNAVTAVRWGGAG-LIYTSSKDRTVKMW 277
>UNIPROTKB|G4MYQ9 [details] [associations]
symbol:MGG_08133 "Pre-mRNA-processing factor 17"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:CM001232 KO:K12816 RefSeq:XP_003715095.1
ProteinModelPortal:G4MYQ9 EnsemblFungi:MGG_08133T0 GeneID:2678328
KEGG:mgr:MGG_08133 Uniprot:G4MYQ9
Length = 542
Score = 105 (42.0 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 25/82 (30%), Positives = 41/82 (50%)
Query: 616 KQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCV 675
K+ Y GH N G+ I + G ++ASG G W+ ++ ++ + ++ V+CV
Sbjct: 462 KKSYRGHNNAGSAIDID--ISADGQFLASGDTGGYVAFWDWKSCKMFHKIQVEDGQVSCV 519
Query: 676 QCHPFDCV-VATSGIDNTIKIW 696
+ HP + VAT G IK W
Sbjct: 520 KWHPQESSKVATGGASGIIKFW 541
Score = 93 (37.8 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 31/128 (24%), Positives = 63/128 (49%)
Query: 2 ENFPFHDGSIYDMLDTRHTDTRPDVNHSLQMH-SSLVRRLSQE--RELEGHQGCVNAISW 58
E FH ++D + D++ L+ S + ++ + + H + ++++
Sbjct: 199 ETTTFHGSELHDYQGRTYMHVPQDLDIDLRKEPGSTTNYIPKKMVHQWKHHTKAITSLNF 258
Query: 59 --NSKGSLLISGSDDTHINVWS-YSSRKLLHSIETGHSANVFCTKFVPETSDELVVSGAG 115
NS G LL+SGS D+ + +W Y R+LL + +GHS ++ T F T + +S +
Sbjct: 259 FPNS-GHLLLSGSADSTVKIWDVYHQRELLRTY-SGHSKSLSDTTF--NTHGDKFLSASF 314
Query: 116 DAEVRLFN 123
D ++L++
Sbjct: 315 DRMMKLWD 322
Score = 72 (30.4 bits), Expect = 8.2e-05, Sum P(2) = 8.2e-05
Identities = 21/82 (25%), Positives = 38/82 (46%)
Query: 44 RELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP 103
R GH ++ ++N+ G +S S D + +W + K + TG + +V +F P
Sbjct: 288 RTYSGHSKSLSDTTFNTHGDKFLSASFDRMMKLWDTETGKCIAKFTTGKTPHV--VRFNP 345
Query: 104 --ETSDELVVSGAGDAEVRLFN 123
E E V +G D ++ F+
Sbjct: 346 TSELGHEFV-AGMSDNKIVQFD 366
Score = 62 (26.9 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 24/79 (30%), Positives = 34/79 (43%)
Query: 257 RMSPPPCVNYFCPMHLSEHGRSSLHLTHVTFSPNGEEVLLSYSGEH-VYLMDVNHAGGRA 315
R P NY + + + +T + F PN +LLS S + V + DV H R
Sbjct: 228 RKEPGSTTNYIPKKMVHQWKHHTKAITSLNFFPNSGHLLLSGSADSTVKIWDVYHQ--RE 285
Query: 316 MRYTVGDASKIMSFTPTLN 334
+ T SK +S T T N
Sbjct: 286 LLRTYSGHSKSLSDT-TFN 303
Score = 62 (26.9 bits), Expect = 0.00085, Sum P(2) = 0.00085
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 44 RELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSY 79
+E + H G VN I++ G ++ SDD + W Y
Sbjct: 375 QEYDHHLGPVNTITFCDDGRRFMTTSDDRTLRAWEY 410
Score = 55 (24.4 bits), Expect = 1.1e-05, Sum P(4) = 1.1e-05
Identities = 12/47 (25%), Positives = 28/47 (59%)
Query: 78 SYSSRKLLHSIETGHSANVFCTKFVPETSDELVVSGAGDAEVRLFNL 124
+Y +K++H + H+ + F P S L++SG+ D+ V+++++
Sbjct: 236 NYIPKKMVHQWKH-HTKAITSLNFFPN-SGHLLLSGSADSTVKIWDV 280
Score = 55 (24.4 bits), Expect = 1.1e-05, Sum P(4) = 1.1e-05
Identities = 16/60 (26%), Positives = 28/60 (46%)
Query: 273 SEHGRSSLHLTHVTFSPNGEEVLLSYSGEHVYLMDVNHAGGRAMRYTVGDASKIMSFTPT 332
S H +S L+ TF+ +G++ L + + L D G ++T G ++ F PT
Sbjct: 291 SGHSKS---LSDTTFNTHGDKFLSASFDRMMKLWDTE-TGKCIAKFTTGKTPHVVRFNPT 346
Score = 50 (22.7 bits), Expect = 1.1e-05, Sum P(4) = 1.1e-05
Identities = 18/57 (31%), Positives = 27/57 (47%)
Query: 33 HSSLVRRLSQERELE-GHQGCVNAI----SWNSKGSLLISGSDDTHINVW-SYSSRK 83
H ++ RR ERE + G + A + KGS L++ D + W SY SR+
Sbjct: 83 HRAVERRGGPEREFQSGAEVKAEAARIRKTREGKGSALVAEGDGEYKGPWASYKSRQ 139
Score = 45 (20.9 bits), Expect = 0.00010, Sum P(4) = 0.00010
Identities = 9/30 (30%), Positives = 17/30 (56%)
Query: 215 TLSLKSCDISSTRPHLLLVGGSDAFARLYD 244
T ++ S + HLLL G +D+ +++D
Sbjct: 250 TKAITSLNFFPNSGHLLLSGSADSTVKIWD 279
Score = 43 (20.2 bits), Expect = 0.00016, Sum P(4) = 0.00016
Identities = 13/48 (27%), Positives = 22/48 (45%)
Query: 131 GLDDNAITPSALYQC--HTRRVKKLAVEVGNPHVVWSASEDGTLRQHD 176
G N I ++Q HT+ + L + H++ S S D T++ D
Sbjct: 232 GSTTNYIPKKMVHQWKHHTKAITSLNFFPNSGHLLLSGSADSTVKIWD 279
>POMBASE|SPCC126.01c [details] [associations]
symbol:SPCC126.01c "conserved fungal protein"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0008150
"biological_process" evidence=ND] [GO:0043234 "protein complex"
evidence=NAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPCC126.01c GO:GO:0005829 GO:GO:0005634
GO:GO:0043234 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 PIR:T40905 RefSeq:NP_588444.2
ProteinModelPortal:O94394 EnsemblFungi:SPCC126.01c.1 GeneID:2538691
KEGG:spo:SPCC126.01c OMA:WTASADK OrthoDB:EOG4BK8CJ NextBio:20799877
Uniprot:O94394
Length = 369
Score = 132 (51.5 bits), Expect = 6.4e-07, Sum P(2) = 6.4e-07
Identities = 39/137 (28%), Positives = 66/137 (48%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSR--KLLHSIETGHSANVFCTKFVP 103
L GH V + + LL+SGS D + VW SS+ +LL+ + TGHS + C P
Sbjct: 128 LIGHTDYVKCLLLLEEEGLLLSGSTDASLIVWDVSSQPSRLLYKL-TGHSRGIECITRQP 186
Query: 104 ETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHVV 163
T D G+ ++ +R +++++ G L++ + H V L + + +
Sbjct: 187 NT-DIFWTCGS-ESSIRCWHITKVGGSQLEEEG------FWGHQSNVYCLLFDPQDSEAL 238
Query: 164 WSASEDGTLRQHDFRQG 180
W+AS D T+R+ QG
Sbjct: 239 WTASADKTVREWSLYQG 255
Score = 59 (25.8 bits), Expect = 6.4e-07, Sum P(2) = 6.4e-07
Identities = 15/56 (26%), Positives = 28/56 (50%)
Query: 642 IASGSDDGRWFIWEKQTGRLIKMLLGD-EAVVNCVQCHPFDCVVATSGIDNTIKIW 696
IA+ D +W+ TG + + G E+V +Q + + +S +D TI++W
Sbjct: 279 IATACRDEEIRVWDTTTGNVKDIYSGHYESVTKILQWKSY---LISSSLDQTIRVW 331
>POMBASE|SPCC16A11.02 [details] [associations]
symbol:utp13 "U3 snoRNP-associated protein Utp13
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0030490 "maturation of
SSU-rRNA" evidence=ISO] [GO:0030515 "snoRNA binding" evidence=ISO]
[GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPCC16A11.02 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032040 GO:GO:0030490 GO:GO:0005732 HOGENOM:HOG000188765
KO:K14555 OMA:HHFRGSP PIR:T41075 RefSeq:NP_587989.2
ProteinModelPortal:Q9USN3 STRING:Q9USN3 EnsemblFungi:SPCC16A11.02.1
GeneID:2539337 KEGG:spo:SPCC16A11.02 OrthoDB:EOG4DZ53K
NextBio:20800502 Uniprot:Q9USN3
Length = 777
Score = 113 (44.8 bits), Expect = 6.6e-07, Sum P(2) = 6.6e-07
Identities = 38/155 (24%), Positives = 77/155 (49%)
Query: 48 GHQGCVNAISWNSKGS--LLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
GH G ++A+ + + +L SG+DD+ + +W +S + + E GHS+ + F P
Sbjct: 143 GHGGVISALCFGKHQNTWVLASGADDSRVRLWDLNSSRSMAVFE-GHSSVIRGLTFEPTG 201
Query: 106 SDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPH--VV 163
S ++SG+ D V+++N+ + S A+ ++ H+ V+ + G P ++
Sbjct: 202 S--FLLSGSRDKTVQVWNIKKRS-------AVRTIPVF--HS--VEAIGWVNGQPEEKIL 248
Query: 164 WSASEDGTLRQHDFRQGSSCPPA-GSSHQECRNIL 197
++A E + D++ GS P ++H E I+
Sbjct: 249 YTAGEGNLILAWDWKSGSRLDPGVDTTHSETNAII 283
Score = 95 (38.5 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 21/75 (28%), Positives = 36/75 (48%)
Query: 47 EGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPETS 106
EGH + +++ GS L+SGS D + VW+ R + +I HS +V
Sbjct: 186 EGHSSVIRGLTFEPTGSFLLSGSRDKTVQVWNIKKRSAVRTIPVFHSVEAI--GWVNGQP 243
Query: 107 DELVVSGAGDAEVRL 121
+E ++ AG+ + L
Sbjct: 244 EEKILYTAGEGNLIL 258
Score = 94 (38.1 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 31/139 (22%), Positives = 67/139 (48%)
Query: 44 RELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP 103
+ ++ H+ V ++ + +LL +G + + VW + + HS GH + F
Sbjct: 97 KSMKAHETPVITMTIDPTNTLLATGGAEGLVKVWDIAGAYVTHSFR-GHGGVISALCFGK 155
Query: 104 ETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHVV 163
+ ++ SGA D+ VRL++L+ S R + A+++ H+ ++ L E ++
Sbjct: 156 HQNTWVLASGADDSRVRLWDLN--SSRSM--------AVFEGHSSVIRGLTFEPTGSFLL 205
Query: 164 WSASEDGTLRQHDFRQGSS 182
S S D T++ + ++ S+
Sbjct: 206 -SGSRDKTVQVWNIKKRSA 223
Score = 88 (36.0 bits), Expect = 6.6e-07, Sum P(2) = 6.6e-07
Identities = 20/58 (34%), Positives = 29/58 (50%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW 696
G IAS S D +W+ TG ++ +L G V +PF +A+ D TI+IW
Sbjct: 477 GRIIASASQDKTIKLWDSSTGEVVGVLRGHRRGVWACSFNPFSRQLASGSGDRTIRIW 534
Score = 61 (26.5 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 17/60 (28%), Positives = 30/60 (50%)
Query: 642 IASGSDDGRWFIWEKQTGRLIKMLLGDE-AVVNCVQCHPFDCVVATSGIDNTIKIWTPSA 700
+ASGS D IW T + ++ L G A++ + VV+ + D +K+W+ S+
Sbjct: 522 LASGSGDRTIRIWNVDTQQCVQTLEGHTGAILKLIYISQGTQVVSAAA-DGLVKVWSLSS 580
Score = 57 (25.1 bits), Expect = 0.00096, Sum P(2) = 0.00096
Identities = 14/56 (25%), Positives = 26/56 (46%)
Query: 658 TGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIWTPSAS-VPSIVSGGAAG 712
+ R + + + VN +Q ++A++ D TIK+W S V ++ G G
Sbjct: 454 SNRAVWTIKAHDRDVNAIQVSKDGRIIASASQDKTIKLWDSSTGEVVGVLRGHRRG 509
>CGD|CAL0003392 [details] [associations]
symbol:PWP2 species:5476 "Candida albicans" [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0030515 "snoRNA
binding" evidence=IEA] [GO:0034388 "Pwp2p-containing subcomplex of
90S preribosome" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0030010 "establishment of cell polarity" evidence=IEA]
[GO:0000472 "endonucleolytic cleavage to generate mature 5'-end of
SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000910 "cytokinesis" evidence=IEA] [GO:0000447
"endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S
rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] [GO:0000480 "endonucleolytic
cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0003392 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0032040 EMBL:AACQ01000049 EMBL:AACQ01000048
KO:K14558 InterPro:IPR027145 InterPro:IPR007148 PANTHER:PTHR19858
Pfam:PF04003 RefSeq:XP_717900.1 RefSeq:XP_717966.1
ProteinModelPortal:Q5A852 STRING:Q5A852 GeneID:3640416
GeneID:3640479 KEGG:cal:CaO19.10786 KEGG:cal:CaO19.3276
Uniprot:Q5A852
Length = 922
Score = 124 (48.7 bits), Expect = 0.00067, P = 0.00067
Identities = 40/120 (33%), Positives = 62/120 (51%)
Query: 54 NAISWNSKGSLLISGSDDT-HINVWSYSSRKLLHSIETGHSANVFCTKFVPETSDELVVS 112
N ++ + G +++ GS DT I VWS + +LL S+ TGH + C F E S ++ S
Sbjct: 428 NCLAVDPSGEVIVGGSQDTFEIYVWSVQTGQLLDSL-TGHEGPISCLTFGKENS--ILAS 484
Query: 113 GAGDAEVRLFNLSRFS-GRGLDDNAITPSALYQCHTRR--VKKLAVEVGNPHVVWSASED 169
+ D +R++N+ FS + ++ I AL C T R K+LAV + HV ED
Sbjct: 485 ASWDKTIRIWNI--FSRNQTVEPIEIQSDAL--CLTMRPDCKELAVSTLDGHVTIFDIED 540
Score = 104 (41.7 bits), Expect = 6.6e-07, Sum P(2) = 6.6e-07
Identities = 20/59 (33%), Positives = 34/59 (57%)
Query: 639 GDYIASGSDDG-RWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW 696
G+ I GS D ++W QTG+L+ L G E ++C+ + ++A++ D TI+IW
Sbjct: 436 GEVIVGGSQDTFEIYVWSVQTGQLLDSLTGHEGPISCLTFGKENSILASASWDKTIRIW 494
Score = 99 (39.9 bits), Expect = 6.6e-07, Sum P(2) = 6.6e-07
Identities = 27/99 (27%), Positives = 47/99 (47%)
Query: 47 EGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPETS 106
+GH +N + ++ GS L++GSDD I +W S L + T H++ V +F
Sbjct: 336 QGHFDSMNTLCYSPDGSRLVTGSDDGKIKIWDVRSGFCLMTF-TEHTSAVTQVQFAKR-- 392
Query: 107 DELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQC 145
+++ S + D +R ++L RF R T + C
Sbjct: 393 GQVLFSSSLDGTIRAWDLIRF--RNFKTFTATSRVQFNC 429
Score = 72 (30.4 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 35/130 (26%), Positives = 62/130 (47%)
Query: 50 QGCVNAISWNSKGSLLISGSDDT-HINVWSYSSRKLLHSIETGH--SANVFCTKFVPETS 106
Q VN ++ N G L GS + V+ + S + + GH S N C + P+ S
Sbjct: 296 QNAVNTVNINKTGEWLAFGSAKLGQLLVYEWQSESYILK-QQGHFDSMNTLC--YSPDGS 352
Query: 107 DELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHVVWSA 166
+V+G+ D +++++++ SG L +T + HT V ++ V++S+
Sbjct: 353 R--LVTGSDDGKIKIWDVR--SGFCL----MT----FTEHTSAVTQVQF-AKRGQVLFSS 399
Query: 167 SEDGTLRQHD 176
S DGT+R D
Sbjct: 400 SLDGTIRAWD 409
>UNIPROTKB|Q5A852 [details] [associations]
symbol:PWP2 "Putative uncharacterized protein PWP2"
species:237561 "Candida albicans SC5314" [GO:0032040 "small-subunit
processome" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0003392 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0032040 EMBL:AACQ01000049 EMBL:AACQ01000048
KO:K14558 InterPro:IPR027145 InterPro:IPR007148 PANTHER:PTHR19858
Pfam:PF04003 RefSeq:XP_717900.1 RefSeq:XP_717966.1
ProteinModelPortal:Q5A852 STRING:Q5A852 GeneID:3640416
GeneID:3640479 KEGG:cal:CaO19.10786 KEGG:cal:CaO19.3276
Uniprot:Q5A852
Length = 922
Score = 124 (48.7 bits), Expect = 0.00067, P = 0.00067
Identities = 40/120 (33%), Positives = 62/120 (51%)
Query: 54 NAISWNSKGSLLISGSDDT-HINVWSYSSRKLLHSIETGHSANVFCTKFVPETSDELVVS 112
N ++ + G +++ GS DT I VWS + +LL S+ TGH + C F E S ++ S
Sbjct: 428 NCLAVDPSGEVIVGGSQDTFEIYVWSVQTGQLLDSL-TGHEGPISCLTFGKENS--ILAS 484
Query: 113 GAGDAEVRLFNLSRFS-GRGLDDNAITPSALYQCHTRR--VKKLAVEVGNPHVVWSASED 169
+ D +R++N+ FS + ++ I AL C T R K+LAV + HV ED
Sbjct: 485 ASWDKTIRIWNI--FSRNQTVEPIEIQSDAL--CLTMRPDCKELAVSTLDGHVTIFDIED 540
Score = 104 (41.7 bits), Expect = 6.6e-07, Sum P(2) = 6.6e-07
Identities = 20/59 (33%), Positives = 34/59 (57%)
Query: 639 GDYIASGSDDG-RWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW 696
G+ I GS D ++W QTG+L+ L G E ++C+ + ++A++ D TI+IW
Sbjct: 436 GEVIVGGSQDTFEIYVWSVQTGQLLDSLTGHEGPISCLTFGKENSILASASWDKTIRIW 494
Score = 99 (39.9 bits), Expect = 6.6e-07, Sum P(2) = 6.6e-07
Identities = 27/99 (27%), Positives = 47/99 (47%)
Query: 47 EGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPETS 106
+GH +N + ++ GS L++GSDD I +W S L + T H++ V +F
Sbjct: 336 QGHFDSMNTLCYSPDGSRLVTGSDDGKIKIWDVRSGFCLMTF-TEHTSAVTQVQFAKR-- 392
Query: 107 DELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQC 145
+++ S + D +R ++L RF R T + C
Sbjct: 393 GQVLFSSSLDGTIRAWDLIRF--RNFKTFTATSRVQFNC 429
Score = 72 (30.4 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 35/130 (26%), Positives = 62/130 (47%)
Query: 50 QGCVNAISWNSKGSLLISGSDDT-HINVWSYSSRKLLHSIETGH--SANVFCTKFVPETS 106
Q VN ++ N G L GS + V+ + S + + GH S N C + P+ S
Sbjct: 296 QNAVNTVNINKTGEWLAFGSAKLGQLLVYEWQSESYILK-QQGHFDSMNTLC--YSPDGS 352
Query: 107 DELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHVVWSA 166
+V+G+ D +++++++ SG L +T + HT V ++ V++S+
Sbjct: 353 R--LVTGSDDGKIKIWDVR--SGFCL----MT----FTEHTSAVTQVQF-AKRGQVLFSS 399
Query: 167 SEDGTLRQHD 176
S DGT+R D
Sbjct: 400 SLDGTIRAWD 409
>RGD|1565589 [details] [associations]
symbol:Wdr26 "WD repeat domain 26" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1565589 Gene3D:2.130.10.10 SUPFAM:SSF50978
GeneTree:ENSGT00530000063585 PROSITE:PS50897 InterPro:IPR006595
SMART:SM00668 IPI:IPI00767527 PRIDE:F1LTR1
Ensembl:ENSRNOT00000005059 Uniprot:F1LTR1
Length = 622
Score = 127 (49.8 bits), Expect = 7.0e-07, Sum P(3) = 7.0e-07
Identities = 26/67 (38%), Positives = 40/67 (59%)
Query: 634 FLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHP-FDCVVATSGIDNT 692
F G D+IASGS+D + +IW K++ I L G VNCV +P ++A++ D T
Sbjct: 539 FGGHNEDFIASGSEDHKVYIWHKRSELPIAELTGHTRTVNCVSWNPQIPSMMASASDDGT 598
Query: 693 IKIWTPS 699
++IW P+
Sbjct: 599 VRIWGPA 605
Score = 73 (30.8 bits), Expect = 7.0e-07, Sum P(3) = 7.0e-07
Identities = 24/72 (33%), Positives = 40/72 (55%)
Query: 58 WNSKGSLLISGSDDTHINVWSYSSR----KLLHSIETGHSANVFCTKFVPETSDELVVSG 113
+++ G+ L +GS DT + VW + KLL ++E GH+ V + P+ S LV G
Sbjct: 324 FSNDGTKLATGSKDTTVIVWQVDADTHLLKLLKTLE-GHAYGVSYIAWSPDDS-YLVACG 381
Query: 114 AGD-AEVRLFNL 124
D +E+ L+N+
Sbjct: 382 PDDCSELWLWNV 393
Score = 66 (28.3 bits), Expect = 3.5e-06, Sum P(3) = 3.5e-06
Identities = 16/63 (25%), Positives = 33/63 (52%)
Query: 44 RELEGHQGCVNAISWNSKGSLLIS-GSDD-THINVWSYSSRKLLHSIETGHSANVFCTKF 101
+ LEGH V+ I+W+ S L++ G DD + + +W+ + +L + H ++ +
Sbjct: 356 KTLEGHAYGVSYIAWSPDDSYLVACGPDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAW 415
Query: 102 VPE 104
P+
Sbjct: 416 NPD 418
Score = 45 (20.9 bits), Expect = 0.00041, Sum P(3) = 0.00041
Identities = 5/22 (22%), Positives = 13/22 (59%)
Query: 47 EGHQGCVNAISWNSKGSLLISG 68
+ H+ + +++WN G ++G
Sbjct: 404 QSHEDSLTSVAWNPDGKRFVTG 425
Score = 40 (19.1 bits), Expect = 7.0e-07, Sum P(3) = 7.0e-07
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 286 TFSPNGEEVLLSYSGEHVYLMDV 308
T S NG LL+ + + V+L D+
Sbjct: 494 TISKNGRLALLNVATQGVHLWDL 516
>UNIPROTKB|G4MRA1 [details] [associations]
symbol:MGG_04693 "WD repeat-containing protein 57"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001231
KO:K12857 RefSeq:XP_003710838.1 ProteinModelPortal:G4MRA1
EnsemblFungi:MGG_04693T0 GeneID:2678191 KEGG:mgr:MGG_04693
Uniprot:G4MRA1
Length = 352
Score = 96 (38.9 bits), Expect = 8.0e-07, Sum P(2) = 8.0e-07
Identities = 20/60 (33%), Positives = 33/60 (55%)
Query: 637 QRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHP-FDCVVATSGIDNTIKI 695
+ G +A G+ DG IW +TG+L L G +A VNCV+ P + ++ + D T+ +
Sbjct: 289 KEGKRVAMGAADGTVVIWSNETGKLTYKLPGHKAAVNCVEFSPGTEPLILSGSSDKTLLV 348
Score = 96 (38.9 bits), Expect = 8.0e-07, Sum P(2) = 8.0e-07
Identities = 27/121 (22%), Positives = 57/121 (47%)
Query: 7 HDGSIYDMLDTRHTDTRPDVNHSLQMHSSLVRRLSQERELEGHQGCVNAISWNSKGS-LL 65
H G+I D+ +R +D + + + S + + R GH+ +N++ + +G +L
Sbjct: 102 HRGAILDLQWSRDSDIIFSASADMHLASWDLTTGERIRRYVGHEEVINSLDISKRGEEIL 161
Query: 66 ISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPETSDELVVSGAGDAEVRLFNLS 125
SGSDD I +W + IE+ + E +E + SG D +++++++
Sbjct: 162 FSGSDDGTIGIWDPRKKHAADYIESDFPVTAVA---ISEAGNE-IYSGGIDNDIKVWDVR 217
Query: 126 R 126
+
Sbjct: 218 K 218
Score = 94 (38.1 bits), Expect = 2.3e-06, Sum P(3) = 2.3e-06
Identities = 31/135 (22%), Positives = 61/135 (45%)
Query: 45 ELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPE 104
EL GH G + +NS G + SGS D I +W + + I +GH + ++ +
Sbjct: 55 ELSGHSGEIFCAKFNSAGQYIASGSMDRSILLWRANGDCENYGILSGHRGAILDLQWSRD 114
Query: 105 TSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHVVW 164
+ +++ S + D + ++L+ +G + Y H + L + +++
Sbjct: 115 S--DIIFSASADMHLASWDLT--TGERI--------RRYVGHEEVINSLDISKRGEEILF 162
Query: 165 SASEDGTLRQHDFRQ 179
S S+DGT+ D R+
Sbjct: 163 SGSDDGTIGIWDPRK 177
Score = 74 (31.1 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 18/76 (23%), Positives = 39/76 (51%)
Query: 53 VNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPETSDELVVS 112
V A++ + G+ + SG D I VW + +++++ GH + K P++ ++S
Sbjct: 190 VTAVAISEAGNEIYSGGIDNDIKVWDVRKKAVVYNM-AGHRDTITTLKVSPDSQS--LLS 246
Query: 113 GAGDAEVRLFNLSRFS 128
A D+ R +++ F+
Sbjct: 247 YAMDSTARTWDIRPFA 262
Score = 37 (18.1 bits), Expect = 2.3e-06, Sum P(3) = 2.3e-06
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 271 HLSEHGRSSLHLTHVTFSPNGEEVLLSYSG 300
H +++ S +T V S G E+ YSG
Sbjct: 179 HAADYIESDFPVTAVAISEAGNEI---YSG 205
>ZFIN|ZDB-GENE-010724-7 [details] [associations]
symbol:copb2 "coatomer protein complex, subunit beta
2" species:7955 "Danio rerio" [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030903
"notochord development" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-010724-7 GO:GO:0006886 GO:GO:0030117
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005198
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030903 CTD:9276
HOVERGEN:HBG051076 InterPro:IPR016453 PIRSF:PIRSF005567
EMBL:AY294011 IPI:IPI00487448 RefSeq:NP_001001940.1
UniGene:Dr.14625 ProteinModelPortal:Q6JWU7 STRING:Q6JWU7
PRIDE:Q6JWU7 GeneID:114454 KEGG:dre:114454 InParanoid:Q6JWU7
NextBio:20796938 ArrayExpress:Q6JWU7 Bgee:Q6JWU7 Uniprot:Q6JWU7
Length = 934
Score = 149 (57.5 bits), Expect = 4.8e-06, Sum P(3) = 4.8e-06
Identities = 31/84 (36%), Positives = 50/84 (59%)
Query: 46 LEGHQGCVNAISWNSKGS--LLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP 103
LEGH VN I + S G LISG+DD + +W Y ++ + ++E GH+ NV C F P
Sbjct: 181 LEGHDKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLE-GHAQNVSCVNFHP 239
Query: 104 ETSDELVVSGAGDAEVRLFNLSRF 127
E ++++G+ D VR+++ S +
Sbjct: 240 ELP--IIITGSEDGTVRIWHSSTY 261
Score = 102 (41.0 bits), Expect = 8.7e-07, Sum P(2) = 8.7e-07
Identities = 23/63 (36%), Positives = 33/63 (52%)
Query: 639 GD--YIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW 696
GD Y+ SG+DD IW+ Q ++ L G V+CV HP ++ T D T++IW
Sbjct: 197 GDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCVNFHPELPIIITGSEDGTVRIW 256
Query: 697 TPS 699
S
Sbjct: 257 HSS 259
Score = 100 (40.3 bits), Expect = 8.7e-07, Sum P(2) = 8.7e-07
Identities = 39/197 (19%), Positives = 90/197 (45%)
Query: 39 RLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFC 98
RL +R+L V ++ + +++ + + VW++ ++ L+ + E V
Sbjct: 4 RLDIKRKLTARSDRVKSVDLHPSEPWMLASLYNGSVCVWNHETQTLVKTFEVC-DLPVRA 62
Query: 99 TKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVG 158
+KFV + V++GA D ++R+FN N + +++ H+ ++ +AV
Sbjct: 63 SKFVARKN--WVITGADDMQIRVFNY----------NTLERVHMFEAHSDYIRCIAVHPT 110
Query: 159 NPHVVWSASEDGTLRQHDFRQGSSCPPAGSSHQE-CRNILLDLRCGAKRSLADPPKQTLS 217
P+++ S S+D ++ D+ + SC H I+++ + + + A + +
Sbjct: 111 QPYILTS-SDDMLIKLWDWEKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDR---T 166
Query: 218 LKSCDISSTRPHLLLVG 234
+K + S+ P+ L G
Sbjct: 167 IKVWQLGSSSPNFTLEG 183
Score = 46 (21.3 bits), Expect = 4.8e-06, Sum P(3) = 4.8e-06
Identities = 8/35 (22%), Positives = 19/35 (54%)
Query: 269 PMHLSEHGRSSLHLTHVTFSPNGEEVLLSYSGEHV 303
P+ + + G ++ + +PNG V++ GE++
Sbjct: 342 PLAVKDMGSCEIYPQTIQHNPNGRFVVVCGDGEYI 376
Score = 42 (19.8 bits), Expect = 4.8e-06, Sum P(3) = 4.8e-06
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 416 KRKWKNDAQMAIRDC 430
++KWK A++AI C
Sbjct: 667 EQKWKQLAELAISKC 681
Score = 38 (18.4 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 7/24 (29%), Positives = 14/24 (58%)
Query: 356 VATGLGKCRMLVEIARNSLEEGKH 379
+AT G M+ ++A + +GK+
Sbjct: 702 LATASGNASMVAKLAEGAERDGKN 725
>UNIPROTKB|Q15269 [details] [associations]
symbol:PWP2 "Periodic tryptophan protein 2 homolog"
species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=TAS] [GO:0007165 "signal transduction"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471079 GO:GO:0004871
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AP001753 EMBL:AB001517
HOGENOM:HOG000160363 KO:K14558 OMA:VWQCDTP InterPro:IPR027145
InterPro:IPR007148 PANTHER:PTHR19858 Pfam:PF04003 EMBL:X95263
EMBL:X96424 EMBL:X96425 EMBL:U53346 EMBL:U56085 EMBL:U56089
EMBL:U56086 EMBL:U56087 EMBL:U56088 EMBL:AK314184 EMBL:BC013309
EMBL:BC014988 EMBL:AB001523 IPI:IPI00300078 RefSeq:NP_005040.2
UniGene:Hs.449076 ProteinModelPortal:Q15269 SMR:Q15269
IntAct:Q15269 MINT:MINT-1411448 STRING:Q15269 PhosphoSite:Q15269
DMDM:116242740 SWISS-2DPAGE:Q15269 PaxDb:Q15269 PeptideAtlas:Q15269
PRIDE:Q15269 DNASU:5822 Ensembl:ENST00000291576 GeneID:5822
KEGG:hsa:5822 UCSC:uc002zeb.3 CTD:5822 GeneCards:GC21P045527
H-InvDB:HIX0213175 HGNC:HGNC:9711 HPA:HPA024573 MIM:601475
neXtProt:NX_Q15269 PharmGKB:PA162400451 HOVERGEN:HBG030681
InParanoid:Q15269 OrthoDB:EOG4R7V93 PhylomeDB:Q15269
GenomeRNAi:5822 NextBio:22681 ArrayExpress:Q15269 Bgee:Q15269
CleanEx:HS_PWP2 Genevestigator:Q15269 GermOnline:ENSG00000160220
Uniprot:Q15269
Length = 919
Score = 109 (43.4 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 19/59 (32%), Positives = 37/59 (62%)
Query: 639 GDYIASGSDDG-RWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW 696
G+ +++G+ D F+W QTGRL+ +L G E ++ + +P V+A++ D T+++W
Sbjct: 470 GEIVSAGAQDSFEIFVWSMQTGRLLDVLSGHEGPISGLCFNPMKSVLASASWDKTVRLW 528
Score = 92 (37.4 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 23/81 (28%), Positives = 42/81 (51%)
Query: 47 EGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPETS 106
+GH + A++++ G +++G DD + VW+ S + T HS+ V F +
Sbjct: 370 QGHFNSMVALAYSPDGQYIVTGGDDGKVKVWNTLSGFCFVTF-TEHSSGVTGVTFT--AT 426
Query: 107 DELVVSGAGDAEVRLFNLSRF 127
+VV+ + D VR F+L R+
Sbjct: 427 GYVVVTSSMDGTVRAFDLHRY 447
Score = 66 (28.3 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 29/129 (22%), Positives = 58/129 (44%)
Query: 53 VNAISWNSKGSLLISGSDDT-HINVWSYSSRKLLHSIETGHSANVFCTKFVPETSDELVV 111
+ +++ NS G + G + VW + S + + GH ++ + P+ + +V
Sbjct: 333 IASVAINSSGDWIAFGCSGLGQLLVWEWQSESYVLK-QQGHFNSMVALAYSPD--GQYIV 389
Query: 112 SGAGDAEVRLFN-LSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHVVWSASEDG 170
+G D +V+++N LS F +T + H+ V + +VV ++S DG
Sbjct: 390 TGGDDGKVKVWNTLSGFC-------FVT----FTEHSSGVTGVTF-TATGYVVVTSSMDG 437
Query: 171 TLRQHDFRQ 179
T+R D +
Sbjct: 438 TVRAFDLHR 446
>UNIPROTKB|Q2TBM8 [details] [associations]
symbol:WDR26 "WD repeat domain 26" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00530000063585 PROSITE:PS50897 InterPro:IPR006595
SMART:SM00668 HOGENOM:HOG000160946 HOVERGEN:HBG083958 OMA:IRGQFYQ
OrthoDB:EOG4GHZNV CTD:80232 EMBL:DAAA02042638 EMBL:BC109897
IPI:IPI00702354 RefSeq:NP_001070527.1 UniGene:Bt.21955
Ensembl:ENSBTAT00000034200 GeneID:767999 KEGG:bta:767999
InParanoid:Q2TBM8 NextBio:20918354 Uniprot:Q2TBM8
Length = 514
Score = 127 (49.8 bits), Expect = 1.0e-06, Sum P(3) = 1.0e-06
Identities = 26/67 (38%), Positives = 40/67 (59%)
Query: 634 FLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHP-FDCVVATSGIDNT 692
F G D+IASGS+D + +IW K++ I L G VNCV +P ++A++ D T
Sbjct: 431 FGGHNEDFIASGSEDHKVYIWHKRSELPIAELTGHTRTVNCVSWNPQIPSMMASASDDGT 490
Query: 693 IKIWTPS 699
++IW P+
Sbjct: 491 VRIWGPA 497
Score = 68 (29.0 bits), Expect = 1.0e-06, Sum P(3) = 1.0e-06
Identities = 22/72 (30%), Positives = 39/72 (54%)
Query: 58 WNSKGSLLISGSDDTHINVWSYSSR----KLLHSIETGHSANVFCTKFVPETSDELVVSG 113
+++ G+ L +GS DT + +W KLL ++E GH+ V + P+ + LV G
Sbjct: 216 FSNDGTKLATGSKDTTVIIWQVDPDTHLLKLLKTLE-GHAYGVSYIAWSPD-DNYLVACG 273
Query: 114 AGD-AEVRLFNL 124
D +E+ L+N+
Sbjct: 274 PDDCSELWLWNV 285
Score = 63 (27.2 bits), Expect = 3.2e-06, Sum P(3) = 3.2e-06
Identities = 15/63 (23%), Positives = 33/63 (52%)
Query: 44 RELEGHQGCVNAISWNSKGSLLIS-GSDD-THINVWSYSSRKLLHSIETGHSANVFCTKF 101
+ LEGH V+ I+W+ + L++ G DD + + +W+ + +L + H ++ +
Sbjct: 248 KTLEGHAYGVSYIAWSPDDNYLVACGPDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAW 307
Query: 102 VPE 104
P+
Sbjct: 308 NPD 310
Score = 45 (20.9 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 5/22 (22%), Positives = 13/22 (59%)
Query: 47 EGHQGCVNAISWNSKGSLLISG 68
+ H+ + +++WN G ++G
Sbjct: 296 QSHEDSLTSVAWNPDGKRFVTG 317
Score = 40 (19.1 bits), Expect = 1.0e-06, Sum P(3) = 1.0e-06
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 286 TFSPNGEEVLLSYSGEHVYLMDV 308
T S NG LL+ + + V+L D+
Sbjct: 386 TISKNGRLALLNVATQGVHLWDL 408
>UNIPROTKB|F1PIR1 [details] [associations]
symbol:WDR26 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00530000063585 PROSITE:PS50897 InterPro:IPR006595
SMART:SM00668 OMA:IRGQFYQ CTD:80232 EMBL:AAEX03005292
RefSeq:XP_003434930.1 ProteinModelPortal:F1PIR1
Ensembl:ENSCAFT00000025923 GeneID:480115 KEGG:cfa:480115
Uniprot:F1PIR1
Length = 514
Score = 127 (49.8 bits), Expect = 1.0e-06, Sum P(3) = 1.0e-06
Identities = 26/67 (38%), Positives = 40/67 (59%)
Query: 634 FLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHP-FDCVVATSGIDNT 692
F G D+IASGS+D + +IW K++ I L G VNCV +P ++A++ D T
Sbjct: 431 FGGHNEDFIASGSEDHKVYIWHKRSELPIAELTGHTRTVNCVSWNPQIPSMMASASDDGT 490
Query: 693 IKIWTPS 699
++IW P+
Sbjct: 491 VRIWGPA 497
Score = 68 (29.0 bits), Expect = 1.0e-06, Sum P(3) = 1.0e-06
Identities = 22/72 (30%), Positives = 39/72 (54%)
Query: 58 WNSKGSLLISGSDDTHINVWSYSSR----KLLHSIETGHSANVFCTKFVPETSDELVVSG 113
+++ G+ L +GS DT + +W KLL ++E GH+ V + P+ + LV G
Sbjct: 216 FSNDGTKLATGSKDTTVIIWQVDPDTHLLKLLKTLE-GHAYGVSYIAWSPD-DNYLVACG 273
Query: 114 AGD-AEVRLFNL 124
D +E+ L+N+
Sbjct: 274 PDDCSELWLWNV 285
Score = 63 (27.2 bits), Expect = 3.2e-06, Sum P(3) = 3.2e-06
Identities = 15/63 (23%), Positives = 33/63 (52%)
Query: 44 RELEGHQGCVNAISWNSKGSLLIS-GSDD-THINVWSYSSRKLLHSIETGHSANVFCTKF 101
+ LEGH V+ I+W+ + L++ G DD + + +W+ + +L + H ++ +
Sbjct: 248 KTLEGHAYGVSYIAWSPDDNYLVACGPDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAW 307
Query: 102 VPE 104
P+
Sbjct: 308 NPD 310
Score = 45 (20.9 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 5/22 (22%), Positives = 13/22 (59%)
Query: 47 EGHQGCVNAISWNSKGSLLISG 68
+ H+ + +++WN G ++G
Sbjct: 296 QSHEDSLTSVAWNPDGKRFVTG 317
Score = 40 (19.1 bits), Expect = 1.0e-06, Sum P(3) = 1.0e-06
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 286 TFSPNGEEVLLSYSGEHVYLMDV 308
T S NG LL+ + + V+L D+
Sbjct: 386 TISKNGRLALLNVATQGVHLWDL 408
>UNIPROTKB|G8JKX8 [details] [associations]
symbol:COPB2 "Coatomer subunit beta'" species:9913 "Bos
taurus" [GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0015629
"actin cytoskeleton" evidence=IEA] [GO:0006891 "intra-Golgi
vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006891 GO:GO:0030126 GeneTree:ENSGT00640000091529
OMA:LRNKAFG EMBL:DAAA02002931 EMBL:DAAA02002930 EMBL:DAAA02002932
Ensembl:ENSBTAT00000019767 Uniprot:G8JKX8
Length = 713
Score = 151 (58.2 bits), Expect = 1.1e-06, Sum P(3) = 1.1e-06
Identities = 31/84 (36%), Positives = 51/84 (60%)
Query: 46 LEGHQGCVNAISWNSKGS--LLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP 103
LEGH+ VN I + S G LISG+DD + +W Y ++ + ++E GH+ NV C F P
Sbjct: 152 LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLE-GHAQNVSCASFHP 210
Query: 104 ETSDELVVSGAGDAEVRLFNLSRF 127
E ++++G+ D VR+++ S +
Sbjct: 211 ELP--IIITGSEDGTVRIWHSSTY 232
Score = 98 (39.6 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 22/63 (34%), Positives = 32/63 (50%)
Query: 639 GD--YIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW 696
GD Y+ SG+DD IW+ Q ++ L G V+C HP ++ T D T++IW
Sbjct: 168 GDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIW 227
Query: 697 TPS 699
S
Sbjct: 228 HSS 230
Score = 91 (37.1 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 30/132 (22%), Positives = 67/132 (50%)
Query: 53 VNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPETSDELVVS 112
V A + ++ + +++G+DD I V++Y++ + +H E HS + C P + +++
Sbjct: 31 VRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEA-HSDYIRCIAVHP--TQPFILT 87
Query: 113 GAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHVVWSASEDGTL 172
+ D ++L++ D + S +++ HT V ++ + + + SAS D T+
Sbjct: 88 SSDDMLIKLWDW---------DKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTI 138
Query: 173 RQHDFRQGSSCP 184
+ ++ GSS P
Sbjct: 139 KV--WQLGSSSP 148
Score = 46 (21.3 bits), Expect = 1.1e-06, Sum P(3) = 1.1e-06
Identities = 8/35 (22%), Positives = 19/35 (54%)
Query: 269 PMHLSEHGRSSLHLTHVTFSPNGEEVLLSYSGEHV 303
P+ + + G ++ + +PNG V++ GE++
Sbjct: 313 PLAVKDMGSCEIYPQTIQHNPNGRFVVVCGDGEYI 347
Score = 42 (19.8 bits), Expect = 1.1e-06, Sum P(3) = 1.1e-06
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 416 KRKWKNDAQMAIRDC 430
++KWK A++AI C
Sbjct: 638 EQKWKQLAELAISKC 652
Score = 40 (19.1 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 11/41 (26%), Positives = 22/41 (53%)
Query: 356 VATGLGKCRMLVEIARNSLEEGKHPYYGIEACNEVLEGHLS 396
+AT G M+ ++A + +GK+ + + L+G+LS
Sbjct: 673 LATASGNASMVNKLAEGAERDGKN---NVAFMSYFLQGNLS 710
>UNIPROTKB|F1PUU2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001826
"inner cell mass cell differentiation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007219 GeneTree:ENSGT00690000102167
PRINTS:PR00319 GO:GO:0001826 EMBL:AAEX03006625
Ensembl:ENSCAFT00000029052 Uniprot:F1PUU2
Length = 436
Score = 98 (39.6 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 39/136 (28%), Positives = 66/136 (48%)
Query: 47 EGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP-ET 105
+GH+ V +ISW+ G L SG + I +W S+ K + + GHS + + P
Sbjct: 104 QGHRHWVLSISWSPDGKTLASGCKNGQILLWDPSTGKQVGRVLAGHSKWITGLSWEPLHA 163
Query: 106 SDEL--VVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHVV 163
+ E + S + D VR+++ + +GR + +T HT+ V L G ++
Sbjct: 164 NPECRYMASSSKDGSVRVWDTT--AGRC--ERILTG------HTQSVTCL--RWGGDGLL 211
Query: 164 WSASEDGTL---RQHD 176
+SAS+D T+ R HD
Sbjct: 212 YSASQDRTIKVWRAHD 227
Score = 95 (38.5 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 19/62 (30%), Positives = 35/62 (56%)
Query: 636 GQRGDYIASGSDDGRWFIWEK-QTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIK 694
GQ + + SGSDD F+W + + + + G +A++N V P ++A++ D +IK
Sbjct: 289 GQGPERLVSGSDDFTLFMWSPAEDKKPLARMTGHQALINQVLFSPDSRIIASASFDKSIK 348
Query: 695 IW 696
+W
Sbjct: 349 LW 350
Score = 94 (38.1 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 38/151 (25%), Positives = 70/151 (46%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
LEGH V +++++ G L SGS DT + W S+ + H GH V + P+
Sbjct: 61 LEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLST-ETPHFTCQGHRHWVLSISWSPD- 118
Query: 106 SDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEV--GNPHVV 163
+ + SG + ++ L++ S +G+ + + H++ + L+ E NP
Sbjct: 119 -GKTLASGCKNGQILLWDPS--TGKQV-------GRVLAGHSKWITGLSWEPLHANPECR 168
Query: 164 W--SASEDGTLRQHDFRQGSSCPPAGSSHQE 192
+ S+S+DG++R D G C + H +
Sbjct: 169 YMASSSKDGSVRVWDTTAGR-CERILTGHTQ 198
Score = 85 (35.0 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 36/150 (24%), Positives = 62/150 (41%)
Query: 44 RELEGHQGCVNAISW-----NSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFC 98
R L GH + +SW N + + S S D + VW ++ + I TGH+ +V C
Sbjct: 144 RVLAGHSKWITGLSWEPLHANPECRYMASSSKDGSVRVWDTTAGRC-ERILTGHTQSVTC 202
Query: 99 TKFVPETSDELVVSGAGDAEVRLFN-----LSR-FSGRGLDDNAITPSALYQCHTRRVKK 152
++ D L+ S + D ++++ L R G G N + S Y T +
Sbjct: 203 LRW---GGDGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEP 259
Query: 153 LAVEVGNPHVVWSASE--DGTLRQHDFRQG 180
+ + S E D LR+++ +G
Sbjct: 260 AEASINAQDLQGSLQELKDRALRRYNLVRG 289
Score = 75 (31.5 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 20/54 (37%), Positives = 24/54 (44%)
Query: 43 ERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIET-GHSAN 95
ER L GH V + W G LL S S D I VW L +++ GH N
Sbjct: 190 ERILTGHTQSVTCLRWGGDG-LLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVN 242
Score = 71 (30.1 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 17/59 (28%), Positives = 29/59 (49%)
Query: 642 IASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIWTPSA 700
IAS S D +W+ +TG+ + L G A V + ++ + D+T+K+W A
Sbjct: 338 IASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKA 396
Score = 67 (28.6 bits), Expect = 0.00083, Sum P(2) = 0.00083
Identities = 17/55 (30%), Positives = 25/55 (45%)
Query: 642 IASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW 696
+ SGS D +W+ + +L L G V V P VA+ G D ++IW
Sbjct: 380 LVSGSSDSTLKVWDVKAQKLAADLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 434
>MGI|MGI:1918511 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0030030
"cell projection organization" evidence=IEA] [GO:0042384 "cilium
assembly" evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1918511 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OrthoDB:EOG41VK2R OMA:TASWDTF
EMBL:AK045302 EMBL:AK050233 EMBL:AK090075 IPI:IPI00221837
RefSeq:NP_082016.1 UniGene:Mm.440656 ProteinModelPortal:Q8BHD1
SMR:Q8BHD1 IntAct:Q8BHD1 PhosphoSite:Q8BHD1 PRIDE:Q8BHD1
Ensembl:ENSMUST00000020113 GeneID:382406 KEGG:mmu:382406
UCSC:uc007gxh.1 InParanoid:Q8BHD1 NextBio:403270 Bgee:Q8BHD1
CleanEx:MM_WDR51B Genevestigator:Q8BHD1
GermOnline:ENSMUSG00000019952 Uniprot:Q8BHD1
Length = 476
Score = 116 (45.9 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 25/85 (29%), Positives = 48/85 (56%)
Query: 39 RLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFC 98
R + E + H V ++ +++ G LL++ S+D I VWS ++ L+S+ H+ V C
Sbjct: 91 RKGKSSEFKAHTAPVRSVDFSADGQLLVTASEDKSIKVWSMFRQRFLYSLYR-HTHWVRC 149
Query: 99 TKFVPETSDELVVSGAGDAEVRLFN 123
KF P+ L+VS + D +++++
Sbjct: 150 AKFSPD--GRLIVSCSEDKTIKIWD 172
Score = 92 (37.4 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 35/138 (25%), Positives = 63/138 (45%)
Query: 43 ERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFV 102
ER +GH+ + + ++ + + S DT + +WS + GH V +F
Sbjct: 11 ERSFKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRY-VGHKDVVTSLQFS 69
Query: 103 PETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHV 162
P+ + L+ S + D VRL+ L R G+ S+ ++ HT V+ + +
Sbjct: 70 PQGN--LLASASRDRTVRLWVLDR-KGK---------SSEFKAHTAPVRSVDFSADGQLL 117
Query: 163 VWSASEDGTLRQHD-FRQ 179
V +ASED +++ FRQ
Sbjct: 118 V-TASEDKSIKVWSMFRQ 134
Score = 77 (32.2 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 20/74 (27%), Positives = 33/74 (44%)
Query: 624 NVGTDIKQASFL--GQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFD 681
N + A+F+ G IAS D IW+ + +L++ VNC+ HP
Sbjct: 181 NFSDSVGFANFVDFNPNGTCIASAGSDHAVKIWDIRMNKLLQHYQVHSCGVNCLSFHPLG 240
Query: 682 CVVATSGIDNTIKI 695
+ T+ D T+K+
Sbjct: 241 NSLVTASSDGTVKM 254
Score = 51 (23.0 bits), Expect = 0.00053, Sum P(3) = 0.00053
Identities = 16/58 (27%), Positives = 25/58 (43%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW 696
G+ + + S DG + + GRLI L G V V ++ + G D + IW
Sbjct: 240 GNSLVTASSDGTVKMLDLIEGRLIYTLQGHTGPVFTVSFSKDGELLTSGGADAQVLIW 297
Score = 40 (19.1 bits), Expect = 0.00053, Sum P(3) = 0.00053
Identities = 15/53 (28%), Positives = 21/53 (39%)
Query: 285 VTFSPNGEEVLLSYSGEHVYLMDVNHAGGRAMRYTVGDAS-KIMSFTPTLNGL 336
V F+PNG + + S V + D+ Y V +SF P N L
Sbjct: 192 VDFNPNGTCIASAGSDHAVKIWDIR-MNKLLQHYQVHSCGVNCLSFHPLGNSL 243
>MGI|MGI:2429770 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10090
"Mus musculus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IMP] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007219 "Notch signaling
pathway" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:2429770 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
EMBL:AL603745 GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855
OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154 CTD:54475
HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS EMBL:BC018399 IPI:IPI00124677
RefSeq:NP_663406.2 UniGene:Mm.29176 ProteinModelPortal:Q8VEJ4
SMR:Q8VEJ4 STRING:Q8VEJ4 PhosphoSite:Q8VEJ4 PaxDb:Q8VEJ4
PRIDE:Q8VEJ4 Ensembl:ENSMUST00000103213 GeneID:217011
KEGG:mmu:217011 InParanoid:B1ARD5 NextBio:375506 Bgee:Q8VEJ4
CleanEx:MM_NLE1 Genevestigator:Q8VEJ4 GermOnline:ENSMUSG00000020692
Uniprot:Q8VEJ4
Length = 485
Score = 97 (39.2 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 20/62 (32%), Positives = 35/62 (56%)
Query: 636 GQRGDYIASGSDDGRWFIWEK-QTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIK 694
GQ + + SGSDD F+W + + + + G +A++N V P +VA++ D +IK
Sbjct: 338 GQGPERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIVASASFDKSIK 397
Query: 695 IW 696
+W
Sbjct: 398 LW 399
Score = 97 (39.2 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 51/199 (25%), Positives = 86/199 (43%)
Query: 4 FPFHDGSIYDML----DTRHTDTRPDVNHSLQMHSSL-VRRLSQ-ERELEGHQGCVNAIS 57
F HD I L +++ +T V+ Q + VR +++ LEGH V +++
Sbjct: 62 FYVHDAEIVSSLGKTLESQSVETEKIVDIIYQPQAVFRVRAVTRCTSSLEGHSEAVISVA 121
Query: 58 WNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPETSDELVVSGAGDA 117
++ G L SGS DT + W S+ + H GH V + P+ + + SG +
Sbjct: 122 FSPTGKYLASGSGDTTVRFWDLST-ETPHFTCKGHRHWVLSISWSPD--GKKLASGCKNG 178
Query: 118 EVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEV--GNPHV--VWSASEDGTLR 173
+V L++ S GL H++ + L+ E NP V S+S+DG++R
Sbjct: 179 QVLLWDPST----GLQVGRTLTG-----HSKWITGLSWEPLHMNPECRYVASSSKDGSVR 229
Query: 174 QHDFRQGSSCPPAGSSHQE 192
D G C + H +
Sbjct: 230 VWDTTAGR-CERILTGHTQ 247
Score = 94 (38.1 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 60/211 (28%), Positives = 95/211 (45%)
Query: 47 EGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP-ET 105
+GH+ V +ISW+ G L SG + + +W S+ + TGHS + + P
Sbjct: 153 KGHRHWVLSISWSPDGKKLASGCKNGQVLLWDPSTGLQVGRTLTGHSKWITGLSWEPLHM 212
Query: 106 SDEL--VVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHVV 163
+ E V S + D VR+++ + +GR + +T HT+ V L G ++
Sbjct: 213 NPECRYVASSSKDGSVRVWDTT--AGRC--ERILTG------HTQSVTCL--RWGGDGLL 260
Query: 164 WSASEDGTLRQHDFRQGSSCPPA-GSSHQ-ECRNILLD--LRCGA-KRSLADPPKQTL-- 216
+SAS+D T++ G C G H + D LR GA + + A Q L
Sbjct: 261 YSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEATVNAQDLQG 320
Query: 217 SLKSC-DISSTRPHLL-------LVGGSDAF 239
SLK + +S+R +L+ LV GSD F
Sbjct: 321 SLKELKERASSRYNLVRGQGPERLVSGSDDF 351
Score = 75 (31.5 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 20/54 (37%), Positives = 24/54 (44%)
Query: 43 ERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIET-GHSAN 95
ER L GH V + W G LL S S D I VW L +++ GH N
Sbjct: 239 ERILTGHTQSVTCLRWGGDG-LLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVN 291
Score = 70 (29.7 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 16/59 (27%), Positives = 29/59 (49%)
Query: 642 IASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIWTPSA 700
+AS S D +W+ +TG+ + L G A V + ++ + D+T+K+W A
Sbjct: 387 VASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKA 445
>RGD|2323942 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=IEA;ISO] [GO:0005932 "microtubule basal body"
evidence=IEA;ISO] [GO:0042384 "cilium assembly" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:2323942 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OrthoDB:EOG41VK2R IPI:IPI00387818
ProteinModelPortal:D3ZW91 Ensembl:ENSRNOT00000031905
UCSC:RGD:2323942 ArrayExpress:D3ZW91 Uniprot:D3ZW91
Length = 477
Score = 112 (44.5 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 24/85 (28%), Positives = 47/85 (55%)
Query: 39 RLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFC 98
R + E + H V ++ +++ G L++ S+D I VWS ++ L+S+ H+ V C
Sbjct: 91 RKGKSSEFKAHTAPVRSVDFSADGQFLVTASEDKSIKVWSMYRQRFLYSLYR-HTHWVRC 149
Query: 99 TKFVPETSDELVVSGAGDAEVRLFN 123
KF P+ L+VS + D +++++
Sbjct: 150 AKFSPD--GRLIVSCSEDKTIKIWD 172
Score = 89 (36.4 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 32/131 (24%), Positives = 60/131 (45%)
Query: 43 ERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFV 102
ER +GH+ + + ++ + + S DT + +WS + GH V +F
Sbjct: 11 ERYFKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRY-VGHKDVVTSLQFS 69
Query: 103 PETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHV 162
P+ + L+ S + D VRL+ L R G+ S+ ++ HT V+ + +
Sbjct: 70 PQGN--LLASASRDKTVRLWVLDR-KGK---------SSEFKAHTAPVRSVDFSADGQFL 117
Query: 163 VWSASEDGTLR 173
V +ASED +++
Sbjct: 118 V-TASEDKSIK 127
Score = 81 (33.6 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 22/74 (29%), Positives = 33/74 (44%)
Query: 624 NVGTDIKQASFL--GQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFD 681
N + A+F+ G IAS D IW+ + RL++ VNC+ HP
Sbjct: 181 NFSDSVGFANFVDFSPNGTCIASAGSDHAVRIWDIRMNRLLQHYQVHSCGVNCLSFHPSG 240
Query: 682 CVVATSGIDNTIKI 695
+ T+ D T+KI
Sbjct: 241 NSLVTASSDGTVKI 254
Score = 54 (24.1 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 17/61 (27%), Positives = 25/61 (40%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIWTP 698
G+ + + S DG I + GRLI L G V V + + G D + +W
Sbjct: 240 GNSLVTASSDGTVKILDLVEGRLIYTLQGHTGPVFTVSFSKDGELFTSGGADAQVLVWRT 299
Query: 699 S 699
S
Sbjct: 300 S 300
Score = 45 (20.9 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 17/54 (31%), Positives = 25/54 (46%)
Query: 285 VTFSPNGEEVLLSYSGEHVYLMDVNHAGGRAMR-YTVGDAS-KIMSFTPTLNGL 336
V FSPNG + + S V + D+ R ++ Y V +SF P+ N L
Sbjct: 192 VDFSPNGTCIASAGSDHAVRIWDIRM--NRLLQHYQVHSCGVNCLSFHPSGNSL 243
>RGD|1308301 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10116
"Rattus norvegicus" [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0007219
"Notch signaling pathway" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:1308301
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972
Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS
EMBL:BC166567 IPI:IPI00896225 RefSeq:NP_001121006.1
UniGene:Rn.19087 STRING:B2GV82 Ensembl:ENSRNOT00000011320
GeneID:303372 KEGG:rno:303372 NextBio:651216 Genevestigator:B2GV82
Uniprot:B2GV82
Length = 487
Score = 97 (39.2 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 20/62 (32%), Positives = 35/62 (56%)
Query: 636 GQRGDYIASGSDDGRWFIWEK-QTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIK 694
GQ + + SGSDD F+W + + + + G +A++N V P +VA++ D +IK
Sbjct: 340 GQGPERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIVASASFDKSIK 399
Query: 695 IW 696
+W
Sbjct: 400 LW 401
Score = 97 (39.2 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 50/199 (25%), Positives = 88/199 (44%)
Query: 4 FPFHDGSIYDML----DTRHTDTRPDVNHSLQMHSSL-VRRLSQ-ERELEGHQGCVNAIS 57
F HD I L +++ +T V+ Q + VR +++ LEGH V +++
Sbjct: 64 FYVHDAEIVSSLGKTLESQSVETEKIVDIIYQPQAVFRVRAVTRCTSSLEGHSEAVISVA 123
Query: 58 WNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPETSDELVVSGAGDA 117
++ G L SGS DT + W S+ + H GH V + P+ + + SG +
Sbjct: 124 FSPTGKYLASGSGDTTVRFWDLST-ETPHFTCKGHRHWVLSISWSPD--GKKLASGCKNG 180
Query: 118 EVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEV--GNPHV--VWSASEDGTLR 173
++ L++ S + G +T H++ + L+ E NP V S+S+DG++R
Sbjct: 181 QILLWDPSTGTQVG---RTLTG------HSKWITGLSWEPLHMNPECRYVASSSKDGSVR 231
Query: 174 QHDFRQGSSCPPAGSSHQE 192
D G C + H +
Sbjct: 232 VWDTTAGR-CERILTGHTQ 249
Score = 96 (38.9 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 61/211 (28%), Positives = 95/211 (45%)
Query: 47 EGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP-ET 105
+GH+ V +ISW+ G L SG + I +W S+ + TGHS + + P
Sbjct: 155 KGHRHWVLSISWSPDGKKLASGCKNGQILLWDPSTGTQVGRTLTGHSKWITGLSWEPLHM 214
Query: 106 SDEL--VVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHVV 163
+ E V S + D VR+++ + +GR + +T HT+ V L G ++
Sbjct: 215 NPECRYVASSSKDGSVRVWDTT--AGRC--ERILTG------HTQSVTCL--RWGGDGLL 262
Query: 164 WSASEDGTLRQHDFRQGSSCPPA-GSSHQ-ECRNILLD--LRCGA-KRSLADPPKQTL-- 216
+SAS+D T++ G C G H + D LR GA + + A Q L
Sbjct: 263 YSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEATVNAQDLQG 322
Query: 217 SLKSC-DISSTRPHLL-------LVGGSDAF 239
SLK + +S+R +L+ LV GSD F
Sbjct: 323 SLKELKERASSRYNLVRGQGPERLVSGSDDF 353
Score = 75 (31.5 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 20/54 (37%), Positives = 24/54 (44%)
Query: 43 ERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIET-GHSAN 95
ER L GH V + W G LL S S D I VW L +++ GH N
Sbjct: 241 ERILTGHTQSVTCLRWGGDG-LLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVN 293
Score = 70 (29.7 bits), Expect = 0.00071, Sum P(2) = 0.00071
Identities = 16/59 (27%), Positives = 29/59 (49%)
Query: 642 IASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIWTPSA 700
+AS S D +W+ +TG+ + L G A V + ++ + D+T+K+W A
Sbjct: 389 VASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKA 447
>TAIR|locus:2061997 [details] [associations]
symbol:AT2G47410 "AT2G47410" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0009630 "gravitropism"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001487
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297 SMART:SM00320
EMBL:CP002685 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 Gene3D:1.20.920.10 SUPFAM:SSF47370 GO:GO:0080008
KO:K11797 IPI:IPI00537086 RefSeq:NP_850474.3 UniGene:At.36365
ProteinModelPortal:F4IL43 PRIDE:F4IL43 EnsemblPlants:AT2G47410.1
GeneID:819354 KEGG:ath:AT2G47410 OMA:CDSSMIP Uniprot:F4IL43
Length = 1520
Score = 139 (54.0 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 42/159 (26%), Positives = 76/159 (47%)
Query: 28 HSLQMHSSLVRRLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHS 87
H++ S++V+++ ++L GH+ V ++ G +I+GSDD + +WS + L S
Sbjct: 214 HAIAKPSTMVQKMQNIKKLRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETALCLAS 273
Query: 88 IETGHSANVFCTKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHT 147
GH ++ T +++ LV S + D +R++ L G+ P ++ + HT
Sbjct: 274 CR-GHEGDI--TDLAVSSNNALVASASNDFVIRVWRLPD----GM------PISVLRGHT 320
Query: 148 RRVKKLAVEVGNPHV--VWSASEDGTLRQHDFRQGSSCP 184
V +A V + S+S+DGT R D R P
Sbjct: 321 GAVTAIAFSPRQASVYQLLSSSDDGTCRIWDARYSQWLP 359
Score = 65 (27.9 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 17/64 (26%), Positives = 26/64 (40%)
Query: 641 YIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATS-GIDNTIKIWTPS 699
++ + D R +W G L+ L G + HPF+ +A S G D IW
Sbjct: 542 FVLAAIMDCRICVWNAADGSLVHCLTGHSESSYVLDVHPFNPRIAMSAGYDGKTIIWDIW 601
Query: 700 ASVP 703
+P
Sbjct: 602 EGIP 605
Score = 38 (18.4 bits), Expect = 0.00071, Sum P(2) = 0.00071
Identities = 10/22 (45%), Positives = 12/22 (54%)
Query: 677 CHPFDCVVATSGIDNTIKIWTP 698
CH D +V S D + IWTP
Sbjct: 468 CH--DNIVTCSR-DGSAIIWTP 486
>UNIPROTKB|E1BL00 [details] [associations]
symbol:PWP2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR011047
SUPFAM:SSF50998 GeneTree:ENSGT00550000074981 KO:K14558 OMA:VWQCDTP
InterPro:IPR027145 InterPro:IPR007148 PANTHER:PTHR19858
Pfam:PF04003 CTD:5822 EMBL:DAAA02003485 IPI:IPI00686265
RefSeq:XP_002685190.1 RefSeq:XP_592170.3 ProteinModelPortal:E1BL00
Ensembl:ENSBTAT00000009343 GeneID:514336 KEGG:bta:514336
NextBio:20871282 Uniprot:E1BL00
Length = 919
Score = 107 (42.7 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 20/59 (33%), Positives = 36/59 (61%)
Query: 639 GDYIASGSDDG-RWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW 696
G+ +++G+ D FIW QTGRL+ +L G E ++ + +P V+A++ D T+ +W
Sbjct: 468 GEIVSAGAQDSFEVFIWSMQTGRLLDVLSGHEGPISGLCFNPMKSVLASASWDRTVHLW 526
Score = 93 (37.8 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 22/81 (27%), Positives = 43/81 (53%)
Query: 47 EGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPETS 106
+GH + +++++ G +++G DD + VW+ S + T HS+ V F T+
Sbjct: 368 QGHFNSMVSLAYSPDGQYIVTGGDDGKVKVWNSLSGFCFVTF-TEHSSGVTGVTFT--TT 424
Query: 107 DELVVSGAGDAEVRLFNLSRF 127
++V+ + D VR F+L R+
Sbjct: 425 GYVIVTSSMDGTVRAFDLHRY 445
>UNIPROTKB|F1N0J7 [details] [associations]
symbol:DCAF5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005739 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0080008
OMA:YIGEDNY GeneTree:ENSGT00530000062951 EMBL:DAAA02029489
IPI:IPI00687521 Ensembl:ENSBTAT00000028279 Uniprot:F1N0J7
Length = 876
Score = 121 (47.7 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 31/89 (34%), Positives = 48/89 (53%)
Query: 621 GHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQT-------GRLIK---MLL-GDE 669
G+ N T +K F G R YI SGSDD ++W GR++ M+L G
Sbjct: 204 GYFNSCT-MKSCCFAGDRDQYILSGSDDFNLYMWRIPADPEAGGIGRVVNGAFMVLKGHR 262
Query: 670 AVVNCVQCHPFDCVVATSGIDNTIKIWTP 698
++VN V+ +P ++ +SG++ IKIW+P
Sbjct: 263 SIVNQVRFNPHTYMICSSGVEKIIKIWSP 291
Score = 78 (32.5 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 33/122 (27%), Positives = 52/122 (42%)
Query: 68 GSDDTHINVW----SYSSRKLLHSIETGHSANVFCTKFVPETSDELVVSGAGDAEVRLFN 123
G DD + +W + SR ++ H +N+FC F + + V SG D +V L +
Sbjct: 1 GGDDRRVLLWHMEQAIHSRVKPIQLKGEHHSNIFCLAF--NSGNTKVFSGGNDEQVILHD 58
Query: 124 LSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHVVWSASEDGTLRQHDFRQGSSC 183
+ S LD A H V L+V N ++ S+S+DG + D R+
Sbjct: 59 VE--SSETLDVFA---------HEDAVYGLSVSPVNDNIFASSSDDGRVLIWDIRESPHG 107
Query: 184 PP 185
P
Sbjct: 108 EP 109
Score = 57 (25.1 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 20/88 (22%), Positives = 40/88 (45%)
Query: 45 ELEG-HQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP 103
+L+G H + +++NS + + SG +D + + S + L H V+ P
Sbjct: 24 QLKGEHHSNIFCLAFNSGNTKVFSGGNDEQVILHDVESSETLDVF--AHEDAVYGLSVSP 81
Query: 104 ETSDELVVSGAGDAEVRLFNLSRFSGRG 131
+D + S + D V ++++ R S G
Sbjct: 82 -VNDNIFASSSDDGRVLIWDI-RESPHG 107
>WB|WBGene00003047 [details] [associations]
symbol:lis-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040025
"vulval development" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0035046 "pronuclear migration" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0007100 "mitotic
centrosome separation" evidence=IMP] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0007018
"microtubule-based movement" evidence=IMP] [GO:0051026 "chiasma
assembly" evidence=IMP] [GO:0043652 "engulfment of apoptotic cell"
evidence=IMP] [GO:0051932 "synaptic transmission, GABAergic"
evidence=IGI;IMP] [GO:0048489 "synaptic vesicle transport"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005938
"cell cortex" evidence=IDA] [GO:0005818 "aster" evidence=IDA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005874 "microtubule"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0009792 GO:GO:0000132 GO:GO:0035046 GO:GO:0048471
GO:GO:0007399 GO:GO:0030154 GO:GO:0000776 GO:GO:0051301
GO:GO:0007052 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0048477
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0048489
GO:GO:0005874 GO:GO:0040025 GO:GO:0043652 GO:GO:0005818
GO:GO:0007018 GO:GO:0000777 GO:GO:0051026 GO:GO:0051932 EMBL:Z81113
GO:GO:0007100 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AF164430 PIR:T24399
RefSeq:NP_499755.1 UniGene:Cel.19492 ProteinModelPortal:Q9NDC9
SMR:Q9NDC9 IntAct:Q9NDC9 STRING:Q9NDC9 PaxDb:Q9NDC9
EnsemblMetazoa:T03F6.5 GeneID:176758 KEGG:cel:CELE_T03F6.5
UCSC:T03F6.5 CTD:36791 WormBase:T03F6.5 InParanoid:Q9NDC9
NextBio:893884 Uniprot:Q9NDC9
Length = 404
Score = 106 (42.4 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 28/84 (33%), Positives = 45/84 (53%)
Query: 43 ERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSR-KLLHSIETGHSANVFCTKF 101
ER L+GH VN I+ ++ G L+S S D I +W + L S++ GH V F
Sbjct: 141 ERTLKGHTDAVNDIAIDAAGKQLVSCSSDLSIKLWDFGQTYDCLKSLK-GHEHTVSSVTF 199
Query: 102 VPETSDELVVSGAGDAEVRLFNLS 125
+P T D V+S + D ++ +++S
Sbjct: 200 LP-TGD-FVLSASRDHTIKQWDIS 221
Score = 85 (35.0 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 18/59 (30%), Positives = 28/59 (47%)
Query: 638 RGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW 696
+G Y+ S +DD +WE R +K + E V+ V H V T +D + K+W
Sbjct: 343 KGKYLISVADDKTLRVWELSAQRCMKAIEAHEHFVSTVAFHQTSPFVITGSVDMSCKVW 401
Score = 67 (28.6 bits), Expect = 9.2e-05, Sum P(2) = 9.2e-05
Identities = 19/65 (29%), Positives = 28/65 (43%)
Query: 636 GQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKI 695
G + SGS D W TG ++ LL E V + HP + + D T+++
Sbjct: 299 GNSTHILFSGSRDRSIKAWNINTGDVLFTLLAHENWVRGLAFHPKGKYLISVADDKTLRV 358
Query: 696 WTPSA 700
W SA
Sbjct: 359 WELSA 363
>ZFIN|ZDB-GENE-040426-978 [details] [associations]
symbol:snrnp40 "small nuclear ribonucleoprotein 40
(U5)" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040426-978 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676 GO:GO:0030529
HSSP:P16649 HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 CTD:9410 HOVERGEN:HBG105197
OrthoDB:EOG4JM7Q0 EMBL:CU207343 EMBL:BC051783 IPI:IPI00506401
RefSeq:NP_956616.1 UniGene:Dr.133508 STRING:Q7ZTY9
Ensembl:ENSDART00000038230 GeneID:393292 KEGG:dre:393292
InParanoid:Q7ZTY9 NextBio:20814348 Uniprot:Q7ZTY9
Length = 347
Score = 104 (41.7 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 25/82 (30%), Positives = 45/82 (54%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANV-FCTKFVPE 104
L+GH G V + +N+ GSLL S S D + VW + + + ++ GH++ V C F
Sbjct: 95 LKGHSGAVMELHYNTDGSLLFSASTDKTVCVWDSETGERVKRLK-GHTSFVNSC--FPAR 151
Query: 105 TSDELVVSGAGDAEVRLFNLSR 126
+L +G+ D V+L+++ +
Sbjct: 152 RGPQLACTGSDDGTVKLWDIRK 173
Score = 90 (36.7 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 34/136 (25%), Positives = 65/136 (47%)
Query: 44 RELEGHQGCVNAISWNSKG-SLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFV 102
+ L+GH VN+ +G L +GSDD + +W + +H+ + + V F
Sbjct: 135 KRLKGHTSFVNSCFPARRGPQLACTGSDDGTVKLWDIRKKASVHTFQNTYQ--VLSVTF- 191
Query: 103 PETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHV 162
+TSD+ ++SG D ++++++L + N + S Q H V L++ ++
Sbjct: 192 NDTSDQ-IISGGIDNDIKVWDLRQ--------NKLIYSM--QGHGDSVTGLSLSADGSYL 240
Query: 163 VWSASEDGTLRQHDFR 178
+ S S D ++R D R
Sbjct: 241 L-SNSMDNSVRVWDIR 255
Score = 85 (35.0 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 28/91 (30%), Positives = 44/91 (48%)
Query: 606 PYQP-ETVIDMKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKM 664
P+ P E + + Q V H N ++ + S+ G IA+GS D +IW+ T R++
Sbjct: 256 PFAPKERCVKIFQGNV-H-NFEKNLLRCSWSAD-GSKIAAGSADRFVYIWDTTTRRIVYK 312
Query: 665 LLGDEAVVNCVQCHPFDCVVATSGIDNTIKI 695
L G VN V HP + +V + D + I
Sbjct: 313 LPGHAGSVNEVAFHPEEPIVLSGSSDKRLYI 343
Score = 84 (34.6 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 21/76 (27%), Positives = 39/76 (51%)
Query: 53 VNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPETSDELVVS 112
V ++++N +ISG D I VW KL++S++ GH +V T ++S
Sbjct: 186 VLSVTFNDTSDQIISGGIDNDIKVWDLRQNKLIYSMQ-GHGDSV--TGLSLSADGSYLLS 242
Query: 113 GAGDAEVRLFNLSRFS 128
+ D VR++++ F+
Sbjct: 243 NSMDNSVRVWDIRPFA 258
Score = 62 (26.9 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 17/84 (20%), Positives = 37/84 (44%)
Query: 614 DMKQRYVGHCNVGT-DIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVV 672
D++++ H T + +F D I SG D +W+ + +LI + G V
Sbjct: 170 DIRKKASVHTFQNTYQVLSVTF-NDTSDQIISGGIDNDIKVWDLRQNKLIYSMQGHGDSV 228
Query: 673 NCVQCHPFDCVVATSGIDNTIKIW 696
+ + ++ +DN++++W
Sbjct: 229 TGLSLSADGSYLLSNSMDNSVRVW 252
>UNIPROTKB|Q5RD06 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9601 "Pongo abelii" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0042384
"cilium assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
HOVERGEN:HBG057502 KO:K16482 CTD:282809 EMBL:CR858112
RefSeq:NP_001125169.1 UniGene:Pab.14153 ProteinModelPortal:Q5RD06
GeneID:100172056 KEGG:pon:100172056 Uniprot:Q5RD06
Length = 451
Score = 105 (42.0 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 23/79 (29%), Positives = 44/79 (55%)
Query: 45 ELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPE 104
E + H V ++ +++ G L + S+D I VWS ++ L+S+ H+ V C KF P+
Sbjct: 97 EFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYR-HTHWVRCAKFSPD 155
Query: 105 TSDELVVSGAGDAEVRLFN 123
L+VS + D +++++
Sbjct: 156 --GRLIVSCSEDKTIKIWD 172
Score = 87 (35.7 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 21/74 (28%), Positives = 34/74 (45%)
Query: 624 NVGTDIKQASFL--GQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFD 681
N + A+F+ G IAS D +W+ + +L++ VNC+ HP D
Sbjct: 181 NFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSD 240
Query: 682 CVVATSGIDNTIKI 695
+ T+ D T+KI
Sbjct: 241 NYLVTASSDGTLKI 254
Score = 84 (34.6 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 21/80 (26%), Positives = 38/80 (47%)
Query: 43 ERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFV 102
ER +GH+ + ++ + G L + S DT + +W++ + GH V +F
Sbjct: 11 ERYFKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRY-VGHKDVVTSVQFS 69
Query: 103 PETSDELVVSGAGDAEVRLF 122
P + L+ S + D VRL+
Sbjct: 70 PHGN--LLASASRDRTVRLW 87
Score = 61 (26.5 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 17/57 (29%), Positives = 25/57 (43%)
Query: 640 DYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW 696
+Y+ + S DG I + GRLI L G V V + A+ G D + +W
Sbjct: 241 NYLVTASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLW 297
>TAIR|locus:2161840 [details] [associations]
symbol:TEX1 "AT5G56130" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0010267 "production of
ta-siRNAs involved in RNA interference" evidence=IMP] [GO:0031047
"gene silencing by RNA" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 KO:K12880 GO:GO:0010267
EMBL:AB011476 HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000264781
OMA:LAYACDD UniGene:At.29405 UniGene:At.29406 EMBL:AY093120
EMBL:BT000174 IPI:IPI00517881 RefSeq:NP_200424.1
ProteinModelPortal:Q9FKT5 SMR:Q9FKT5 STRING:Q9FKT5 PaxDb:Q9FKT5
PRIDE:Q9FKT5 EnsemblPlants:AT5G56130.1 GeneID:835712
KEGG:ath:AT5G56130 TAIR:At5g56130 InParanoid:Q9FKT5
PhylomeDB:Q9FKT5 ProtClustDB:CLSN2687157 ArrayExpress:Q9FKT5
Genevestigator:Q9FKT5 Uniprot:Q9FKT5
Length = 315
Score = 118 (46.6 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 29/83 (34%), Positives = 47/83 (56%)
Query: 44 RELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYS--SRKLLHSIET-GHSANVFCTK 100
RE +GH+ V++++WNS G+ L SGS D +W+ +E GH+ +V
Sbjct: 14 REYQGHKKKVHSVAWNSNGTKLASGSVDQTARIWNIEPHGHSKAKDLELKGHTDSVDQLC 73
Query: 101 FVPETSDELVVSGAGDAEVRLFN 123
+ P+ SD LV + +GD VRL++
Sbjct: 74 WDPKHSD-LVATASGDKSVRLWD 95
Score = 66 (28.3 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 22/66 (33%), Positives = 34/66 (51%)
Query: 629 IKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSG 688
++ SF G+YIAS S+D I QTGR + + A +N V+ +P ++A +G
Sbjct: 236 VRTISF-NYSGEYIASASEDLFIDIANVQTGRTVHQI-PCRAAMNSVEWNPKYNLLAYAG 293
Query: 689 IDNTIK 694
D K
Sbjct: 294 DDKNPK 299
Score = 40 (19.1 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 6/25 (24%), Positives = 15/25 (60%)
Query: 284 HVTFSPNGEEVLLSYSGEHVYLMDV 308
++T+ P+G V + + + ++DV
Sbjct: 113 NITYKPDGTHVAVGNRDDELTILDV 137
>POMBASE|SPCC18.05c [details] [associations]
symbol:SPCC18.05c "notchless-like protein (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISS] [GO:0042254
"ribosome biogenesis" evidence=ISS] [GO:0043234 "protein complex"
evidence=NAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 PomBase:SPCC18.05c GO:GO:0043234
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0042254 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972 Pfam:PF08154
PIR:T41148 RefSeq:NP_588384.1 ProteinModelPortal:O74855
STRING:O74855 EnsemblFungi:SPCC18.05c.1 GeneID:2539380
KEGG:spo:SPCC18.05c OMA:KAVRIWR OrthoDB:EOG4PP1R9 NextBio:20800545
Uniprot:O74855
Length = 502
Score = 121 (47.7 bits), Expect = 0.00063, P = 0.00063
Identities = 26/78 (33%), Positives = 40/78 (51%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L GH V +W++ LL+S S DT + VW S+K+ + GH VF + P+
Sbjct: 427 LRGHVAAVYQCAWSTDSRLLVSSSQDTTLKVWDVRSKKMKFDLP-GHEDQVFAVDWSPD- 484
Query: 106 SDELVVSGAGDAEVRLFN 123
+ V SG D VR+++
Sbjct: 485 -GQRVASGGADKAVRIWS 501
Score = 100 (40.3 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 32/129 (24%), Positives = 65/129 (50%)
Query: 46 LEGHQGCVNAISWN-SKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPE 104
+ GH G + + ++ S S L++GS D +W ++ + +++ GH+ V C + P+
Sbjct: 130 MNGHDGTIISAQFSPSTSSRLVTGSGDFTARLWDCDTQTPIATMK-GHTNWVSCVAWAPD 188
Query: 105 TSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHVVW 164
S ++ +G+ D +R ++ + S G T + C + LA + G P+++
Sbjct: 189 AS--IIATGSMDNTIRFWDPKKGSPIGDALRRHTKPIMALCW--QPLHLAPDSG-PYLLA 243
Query: 165 SASEDGTLR 173
S S+D T+R
Sbjct: 244 SGSKDNTVR 252
Score = 93 (37.8 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 35/140 (25%), Positives = 61/140 (43%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVF--CTK--- 100
++GH V+ ++W S++ +GS D I W + H+ + C +
Sbjct: 173 MKGHTNWVSCVAWAPDASIIATGSMDNTIRFWDPKKGSPIGDALRRHTKPIMALCWQPLH 232
Query: 101 FVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNP 160
P++ L+ SG+ D VR++N+ R L T S HT + V G
Sbjct: 233 LAPDSGPYLLASGSKDNTVRIWNVKL---RTL---LFTLSG----HTAPIT--CVRWGGQ 280
Query: 161 HVVWSASEDGTLRQHDFRQG 180
+ ++S+S D T+R D + G
Sbjct: 281 NWIYSSSYDKTIRIWDAKDG 300
Score = 90 (36.7 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 19/63 (30%), Positives = 34/63 (53%)
Query: 635 LGQRGDYIASGSDDGRWFIWEKQTG-RLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTI 693
L Q G+ + S SDD + +W+ Q + I + G + VVN P +AT+ D+++
Sbjct: 354 LKQSGERLVSASDDLQLILWDPQKSTKPITKMHGHQKVVNHASFSPDGRCIATASFDSSV 413
Query: 694 KIW 696
++W
Sbjct: 414 RLW 416
Score = 83 (34.3 bits), Expect = 8.6e-05, Sum P(3) = 8.6e-05
Identities = 30/100 (30%), Positives = 45/100 (45%)
Query: 91 GHSANVFCTKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRV 150
GH + +F P TS LV +G+GD RL+ D + TP A + HT V
Sbjct: 132 GHDGTIISAQFSPSTSSRLV-TGSGDFTARLW----------DCDTQTPIATMKGHTNWV 180
Query: 151 KKLAVEVGNPHVVWSASEDGTLRQHDFRQGSSCPPAGSSH 190
+A + ++ + S D T+R D ++GS A H
Sbjct: 181 SCVAW-APDASIIATGSMDNTIRFWDPKKGSPIGDALRRH 219
Score = 80 (33.2 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 25/75 (33%), Positives = 36/75 (48%)
Query: 639 GDYI-ASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW- 696
G Y+ ASGS D IW + L+ L G A + CV+ + + ++S D TI+IW
Sbjct: 238 GPYLLASGSKDNTVRIWNVKLRTLLFTLSGHTAPITCVRWGGQNWIYSSS-YDKTIRIWD 296
Query: 697 TPSASVPSIVSGGAA 711
I+ G AA
Sbjct: 297 AKDGKCLHILKGHAA 311
Score = 79 (32.9 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 25/77 (32%), Positives = 37/77 (48%)
Query: 621 GHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVV-NCVQCHP 679
GH V + ASF G IA+ S D +W+ +TG+ + L G A V C
Sbjct: 387 GHQKV---VNHASF-SPDGRCIATASFDSSVRLWDGKTGKFLATLRGHVAAVYQCAWSTD 442
Query: 680 FDCVVATSGIDNTIKIW 696
+V++S D T+K+W
Sbjct: 443 SRLLVSSSQ-DTTLKVW 458
Score = 78 (32.5 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 20/71 (28%), Positives = 34/71 (47%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L GH + + W + + S D T I +W K LH ++ GH+A V + +
Sbjct: 265 LSGHTAPITCVRWGGQNWIYSSSYDKT-IRIWDAKDGKCLHILK-GHAARV---NHLSLS 319
Query: 106 SDELVVSGAGD 116
++ ++ SGA D
Sbjct: 320 TEHVLRSGAYD 330
Score = 64 (27.6 bits), Expect = 0.00015, Sum P(4) = 0.00015
Identities = 16/56 (28%), Positives = 27/56 (48%)
Query: 642 IASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIWT 697
+ S S D +W+ ++ ++ L G E V V P VA+ G D ++IW+
Sbjct: 446 LVSSSQDTTLKVWDVRSKKMKFDLPGHEDQVFAVDWSPDGQRVASGGADKAVRIWS 501
Score = 45 (20.9 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 10/39 (25%), Positives = 19/39 (48%)
Query: 228 PHLLLVGGSDAFARLYDRRMLPPLTSCQKRMSPPPCVNY 266
P+LL G D R+++ ++ L + +P CV +
Sbjct: 239 PYLLASGSKDNTVRIWNVKLRTLLFTLSGHTAPITCVRW 277
Score = 43 (20.2 bits), Expect = 0.00015, Sum P(4) = 0.00015
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 275 HGRSSLHLTHVTFSPNGEEVLLSYSGEHVYLMD 307
HG + + H +FSP+G + + V L D
Sbjct: 386 HGHQKV-VNHASFSPDGRCIATASFDSSVRLWD 417
>MGI|MGI:1923825 [details] [associations]
symbol:Wdr26 "WD repeat domain 26" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
MGI:MGI:1923825 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319
GeneTree:ENSGT00530000063585 PROSITE:PS50897 InterPro:IPR006595
SMART:SM00668 HOVERGEN:HBG083958 OMA:IRGQFYQ OrthoDB:EOG4GHZNV
CTD:80232 ChiTaRS:WDR26 EMBL:AC113084 EMBL:AK075743 EMBL:AK167116
EMBL:AK167017 EMBL:BC020044 EMBL:BC058601 IPI:IPI00226275
RefSeq:NP_663489.4 UniGene:Mm.289082 ProteinModelPortal:Q8C6G8
SMR:Q8C6G8 IntAct:Q8C6G8 STRING:Q8C6G8 PhosphoSite:Q8C6G8
PaxDb:Q8C6G8 PRIDE:Q8C6G8 Ensembl:ENSMUST00000162819 GeneID:226757
KEGG:mmu:226757 InParanoid:Q8C6G8 NextBio:378339 Bgee:Q8C6G8
CleanEx:MM_WDR26 Genevestigator:Q8C6G8
GermOnline:ENSMUSG00000038733 Uniprot:Q8C6G8
Length = 641
Score = 127 (49.8 bits), Expect = 1.6e-06, Sum P(3) = 1.6e-06
Identities = 26/67 (38%), Positives = 40/67 (59%)
Query: 634 FLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHP-FDCVVATSGIDNT 692
F G D+IASGS+D + +IW K++ I L G VNCV +P ++A++ D T
Sbjct: 558 FGGHNEDFIASGSEDHKVYIWHKRSELPIAELTGHTRTVNCVSWNPQIPSMMASASDDGT 617
Query: 693 IKIWTPS 699
++IW P+
Sbjct: 618 VRIWGPA 624
Score = 70 (29.7 bits), Expect = 1.6e-06, Sum P(3) = 1.6e-06
Identities = 23/72 (31%), Positives = 39/72 (54%)
Query: 58 WNSKGSLLISGSDDTHINVWSYSSR----KLLHSIETGHSANVFCTKFVPETSDELVVSG 113
+++ G+ L +GS DT + +W KLL ++E GH+ V + P+ S LV G
Sbjct: 343 FSNDGTKLATGSKDTTVIIWQVDPDTHLLKLLKTLE-GHAYGVSYIAWSPDDS-YLVACG 400
Query: 114 AGD-AEVRLFNL 124
D +E+ L+N+
Sbjct: 401 PDDCSELWLWNV 412
Score = 66 (28.3 bits), Expect = 3.9e-06, Sum P(3) = 3.9e-06
Identities = 16/63 (25%), Positives = 33/63 (52%)
Query: 44 RELEGHQGCVNAISWNSKGSLLIS-GSDD-THINVWSYSSRKLLHSIETGHSANVFCTKF 101
+ LEGH V+ I+W+ S L++ G DD + + +W+ + +L + H ++ +
Sbjct: 375 KTLEGHAYGVSYIAWSPDDSYLVACGPDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAW 434
Query: 102 VPE 104
P+
Sbjct: 435 NPD 437
Score = 45 (20.9 bits), Expect = 0.00046, Sum P(3) = 0.00046
Identities = 5/22 (22%), Positives = 13/22 (59%)
Query: 47 EGHQGCVNAISWNSKGSLLISG 68
+ H+ + +++WN G ++G
Sbjct: 423 QSHEDSLTSVAWNPDGKRFVTG 444
Score = 40 (19.1 bits), Expect = 1.6e-06, Sum P(3) = 1.6e-06
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 286 TFSPNGEEVLLSYSGEHVYLMDV 308
T S NG LL+ + + V+L D+
Sbjct: 513 TISKNGRLALLNVATQGVHLWDL 535
>TAIR|locus:2012971 [details] [associations]
symbol:AT1G71840 "AT1G71840" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0005829 "cytosol" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684 GO:GO:0005829
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 HOGENOM:HOG000261676 OMA:VWSFEVG HSSP:P16649
EMBL:AY080732 EMBL:BT001964 IPI:IPI00538190 RefSeq:NP_177329.2
UniGene:At.44000 ProteinModelPortal:Q8RXQ4 SMR:Q8RXQ4 IntAct:Q8RXQ4
PRIDE:Q8RXQ4 EnsemblPlants:AT1G71840.1 GeneID:843514
KEGG:ath:AT1G71840 TAIR:At1g71840 InParanoid:Q8RXQ4
PhylomeDB:Q8RXQ4 ProtClustDB:CLSN2680639 ArrayExpress:Q8RXQ4
Genevestigator:Q8RXQ4 Uniprot:Q8RXQ4
Length = 407
Score = 111 (44.1 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 21/78 (26%), Positives = 45/78 (57%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L+G + + W+ +G ++++GS+D + +W+ L+ +GH+ NV C F P+
Sbjct: 151 LDGPGAGIEWVRWHPRGHIVLAGSEDCSLWMWNADKEAYLNMF-SGHNLNVTCGDFTPD- 208
Query: 106 SDELVVSGAGDAEVRLFN 123
+L+ +G+ DA + ++N
Sbjct: 209 -GKLICTGSDDASLIVWN 225
Score = 79 (32.9 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 21/66 (31%), Positives = 29/66 (43%)
Query: 644 SGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVV---ATSGIDNTIKIWTPSA 700
SGS DG I TG+++ L V CV+ P + AT G+D + IW
Sbjct: 259 SGSKDGSVHIVNIVTGKVVSSLNSHTDSVECVKFSPSSATIPLAATGGMDKKLIIWDLQH 318
Query: 701 SVPSIV 706
S P +
Sbjct: 319 STPRFI 324
Score = 68 (29.0 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 18/78 (23%), Positives = 35/78 (44%)
Query: 623 CNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHP-FD 681
C + +++G Y+A+G +G IW+ G + G + V + D
Sbjct: 325 CEHEEGVTSLTWIGT-SKYLATGCANGTVSIWDSLLGNCVHTYHGHQDAVQAISVSTNTD 383
Query: 682 CVVATSGIDNTIKIWTPS 699
+V+ S +DNT +++ S
Sbjct: 384 FIVSVS-VDNTARVFESS 400
>RGD|1582817 [details] [associations]
symbol:Pwp2 "PWP2 periodic tryptophan protein homolog (yeast)"
species:10116 "Rattus norvegicus" [GO:0005730 "nucleolus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1582817 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR011047
SUPFAM:SSF50998 GeneTree:ENSGT00550000074981 KO:K14558
InterPro:IPR027145 InterPro:IPR007148 PANTHER:PTHR19858
Pfam:PF04003 CTD:5822 OrthoDB:EOG4R7V93 IPI:IPI00372838
RefSeq:NP_001162124.1 UniGene:Rn.208019 ProteinModelPortal:D3ZV54
PRIDE:D3ZV54 Ensembl:ENSRNOT00000001605 GeneID:690297
KEGG:rno:690297 UCSC:RGD:1582817 NextBio:740604 Uniprot:D3ZV54
Length = 920
Score = 108 (43.1 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 18/59 (30%), Positives = 37/59 (62%)
Query: 639 GDYIASGSDDG-RWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW 696
G+ +++G+ D F+W QTGRL+ +L G E ++ + +P ++A++ D T+++W
Sbjct: 472 GEIVSAGAQDSFEIFVWSMQTGRLLDVLSGHEGPISGLCFNPMKSILASASWDKTVRLW 530
Score = 91 (37.1 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 21/81 (25%), Positives = 43/81 (53%)
Query: 47 EGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPETS 106
+GH + A++++ G +++G DD + VW+ S ++ T HS+ V F +
Sbjct: 372 QGHFNSMVALAYSPDGQYIVTGGDDGKVKVWNTLSGFCFVTL-TEHSSGVTGVTFT--AT 428
Query: 107 DELVVSGAGDAEVRLFNLSRF 127
++V+ + D VR ++L R+
Sbjct: 429 GHVIVTSSLDGTVRAYDLHRY 449
Score = 74 (31.1 bits), Expect = 8.9e-05, Sum P(2) = 8.9e-05
Identities = 30/129 (23%), Positives = 58/129 (44%)
Query: 53 VNAISWNSKGSLLISGSDDT-HINVWSYSSRKLLHSIETGHSANVFCTKFVPETSDELVV 111
V +++ NS G + G + VW + S + + GH ++ + P+ + +V
Sbjct: 335 VASVAINSSGDWIAFGCSGLGQLLVWEWQSESYVLK-QQGHFNSMVALAYSPD--GQYIV 391
Query: 112 SGAGDAEVRLFN-LSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHVVWSASEDG 170
+G D +V+++N LS F L + H+ V + HV+ ++S DG
Sbjct: 392 TGGDDGKVKVWNTLSGFCFVTLTE-----------HSSGVTGVTF-TATGHVIVTSSLDG 439
Query: 171 TLRQHDFRQ 179
T+R +D +
Sbjct: 440 TVRAYDLHR 448
>FB|FBgn0041171 [details] [associations]
symbol:ago "archipelago" species:7227 "Drosophila
melanogaster" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0008054 "cyclin catabolic process" evidence=TAS]
[GO:0007088 "regulation of mitosis" evidence=IMP] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=NAS] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0030332 "cyclin binding"
evidence=TAS] [GO:0007096 "regulation of exit from mitosis"
evidence=TAS] [GO:0045926 "negative regulation of growth"
evidence=IMP] [GO:0042023 "DNA endoreduplication" evidence=IMP]
[GO:0035147 "branch fusion, open tracheal system" evidence=IMP]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IGI] [GO:0007411 "axon guidance" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0007411 GO:GO:0007088
EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030162 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0045926
GO:GO:0019005 GO:GO:0008054 GO:GO:0007096 GO:GO:0035147
GO:GO:0042023 GO:GO:0030332 GeneTree:ENSGT00690000101849
EMBL:AY061300 EMBL:AY075401 RefSeq:NP_523922.1 RefSeq:NP_728964.1
RefSeq:NP_728965.1 UniGene:Dm.2559 ProteinModelPortal:Q9VZF4
SMR:Q9VZF4 DIP:DIP-32477N IntAct:Q9VZF4 MINT:MINT-901835
STRING:Q9VZF4 PaxDb:Q9VZF4 PRIDE:Q9VZF4 EnsemblMetazoa:FBtr0073245
EnsemblMetazoa:FBtr0073246 EnsemblMetazoa:FBtr0073247 GeneID:38516
KEGG:dme:Dmel_CG15010 UCSC:CG15010-RA CTD:38516 FlyBase:FBgn0041171
InParanoid:Q9VZF4 KO:K10260 OMA:DLEEICT OrthoDB:EOG45TB38
PhylomeDB:Q9VZF4 GenomeRNAi:38516 NextBio:809050 Bgee:Q9VZF4
GermOnline:CG15010 GO:GO:0060253 Uniprot:Q9VZF4
Length = 1326
Score = 113 (44.8 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 30/87 (34%), Positives = 49/87 (56%)
Query: 44 RELEGHQGCVNAISWNSK--GSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKF 101
R L GH G V W+S+ G+++ISGS D + VW S +H+++ GH++ V C
Sbjct: 1029 RTLVGHTGGV----WSSQMSGNIIISGSTDRTLKVWDMDSGACVHTLQ-GHTSTVRCMHL 1083
Query: 102 VPETSDELVVSGAGDAEVRLFNLSRFS 128
VVSG+ DA +R++++ + S
Sbjct: 1084 ----HGSKVVSGSRDATLRVWDIEQGS 1106
Score = 103 (41.3 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 27/81 (33%), Positives = 42/81 (51%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L+GH V + + GS ++SGS D + VW LH + GH A V C ++
Sbjct: 1071 LQGHTSTVRCMHLH--GSKVVSGSRDATLRVWDIEQGSCLHVL-VGHLAAVRCVQY---- 1123
Query: 106 SDELVVSGAGDAEVRLFNLSR 126
+L+VSGA D V++++ R
Sbjct: 1124 DGKLIVSGAYDYMVKIWHPER 1144
Score = 99 (39.9 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 24/80 (30%), Positives = 46/80 (57%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L GH V + ++ G L++SG+ D + +W ++ LH+++ GH+ V+ +F
Sbjct: 1111 LVGHLAAVRCVQYD--GKLIVSGAYDYMVKIWHPERQECLHTLQ-GHTNRVYSLQF---- 1163
Query: 106 SDEL-VVSGAGDAEVRLFNL 124
D L VVSG+ D +R++++
Sbjct: 1164 -DGLHVVSGSLDTSIRVWDV 1182
Score = 98 (39.6 bits), Expect = 0.00016, Sum P(3) = 0.00016
Identities = 24/98 (24%), Positives = 56/98 (57%)
Query: 28 HSLQMHSSLVRRLSQERELEGHQG-CVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLH 86
H ++M+ R + + + L+GH + + ++ G+ ++SGSDD + VWS + K L
Sbjct: 973 HIIEMNWRS-RPVRKPKVLKGHDDHVITCLQFS--GNRIVSGSDDNTLKVWSAVNGKCLR 1029
Query: 87 SIETGHSANVFCTKFVPETSDELVVSGAGDAEVRLFNL 124
++ GH+ V+ ++ S +++SG+ D ++++++
Sbjct: 1030 TL-VGHTGGVWSSQM----SGNIIISGSTDRTLKVWDM 1062
Score = 94 (38.1 bits), Expect = 0.00016, Sum P(3) = 0.00016
Identities = 22/61 (36%), Positives = 32/61 (52%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGI-DNTIKIWT 697
G + SGS D +W+ + G + +L+G A V CVQ +D + SG D +KIW
Sbjct: 1085 GSKVVSGSRDATLRVWDIEQGSCLHVLVGHLAAVRCVQ---YDGKLIVSGAYDYMVKIWH 1141
Query: 698 P 698
P
Sbjct: 1142 P 1142
Score = 89 (36.4 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 24/81 (29%), Positives = 40/81 (49%)
Query: 638 RGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDC-VVATSGIDNTIKIW 696
R + + SG+ D +W+ TG+ ++ L G + V C F+ V TS D T+K+W
Sbjct: 1204 RQNILVSGNADSTVKVWDITTGQCLQTLSGPNKHHSAVTCLQFNSRFVVTSSDDGTVKLW 1263
Query: 697 TPSAS--VPSIV---SGGAAG 712
+ ++V SGG+ G
Sbjct: 1264 DVKTGDFIRNLVALDSGGSGG 1284
Score = 74 (31.1 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 14/58 (24%), Positives = 32/58 (55%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW 696
G ++ SGS D +W+ +TG L+G +++ + ++ ++ + D+T+K+W
Sbjct: 1165 GLHVVSGSLDTSIRVWDVETGNCKHTLMGHQSLTSGMELR--QNILVSGNADSTVKVW 1220
Score = 37 (18.1 bits), Expect = 0.00016, Sum P(3) = 0.00016
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 386 ACNEVLEGHLSGIGPMLRH 404
AC L+GH S + M H
Sbjct: 1066 ACVHTLQGHTSTVRCMHLH 1084
>POMBASE|SPAC227.12 [details] [associations]
symbol:SPAC227.12 "U4/U6 x U5 tri-snRNP complex subunit
Prp4 family (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005829 "cytosol"
evidence=IDA] [GO:0045292 "mRNA cis splicing, via spliceosome"
evidence=ISS] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 PomBase:SPAC227.12
GO:GO:0005829 EMBL:CU329670 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0046540 HSSP:P16649 GO:GO:0045292
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
OMA:CKIWDLR OrthoDB:EOG4V1B90 PIR:T50168 RefSeq:NP_592966.1
ProteinModelPortal:Q9UTC7 IntAct:Q9UTC7 STRING:Q9UTC7
EnsemblFungi:SPAC227.12.1 GeneID:2541477 KEGG:spo:SPAC227.12
NextBio:20802576 Uniprot:Q9UTC7
Length = 462
Score = 113 (44.8 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 44/147 (29%), Positives = 73/147 (49%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWS-YSSRKLLHSIETGHSANVFCTKFVPE 104
LEGH V ++++ G L+S S DT +W ++ +LL ++ GHS +F P+
Sbjct: 261 LEGHLARVGRVAFHPSGDYLVSASFDTTWRLWDVHTGVELL--MQEGHSEGIFSIACQPD 318
Query: 105 TSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHVVW 164
S LV SG DA R+++L SG+ + + H R++ +A N + +
Sbjct: 319 GS--LVSSGGNDAIGRIWDLR--SGKSI--------MVLDEHIRQIVAMAWSP-NGYQLA 365
Query: 165 SASEDGTLRQHDFRQGSSCP--PAGSS 189
++S D T++ D R+ S PA SS
Sbjct: 366 TSSADDTVKIWDLRKVSLAHTIPAHSS 392
Score = 78 (32.5 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 24/77 (31%), Positives = 38/77 (49%)
Query: 622 HCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFD 681
H ++ +D++ R +IA+ DG +W LIK ++G E V V + D
Sbjct: 390 HSSLVSDVRYIESGVNR--FIATSGYDGCVKLWNPLNCSLIKSMVGHEEKVMSVDGYG-D 446
Query: 682 CVVATSGIDNTIKIWTP 698
++ SG D TIK+W P
Sbjct: 447 RFIS-SGYDRTIKLWYP 462
>UNIPROTKB|Q6PBD6 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0035327 "transcriptionally active chromatin"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:BC059759 RefSeq:NP_988871.1 UniGene:Str.5901
ProteinModelPortal:Q6PBD6 Ensembl:ENSXETT00000020997 GeneID:394466
KEGG:xtr:394466 Xenbase:XB-GENE-5751496 InParanoid:Q6PBD6
Bgee:Q6PBD6 Uniprot:Q6PBD6
Length = 305
Score = 103 (41.3 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 24/86 (27%), Positives = 45/86 (52%)
Query: 39 RLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFC 98
RL + LEGHQ V ++ + G+++ S S D HI +W S K + +I+ G + +
Sbjct: 53 RLELQSTLEGHQLGVVSVDVSPSGNIMASSSLDAHIRLWDLESGKQIRAIDAG-PVDAWS 111
Query: 99 TKFVPETSDELVVSGAGDAEVRLFNL 124
F P++ + +G+ +V +F +
Sbjct: 112 VAFSPDSQH--LATGSHVGKVNIFGV 135
Score = 103 (41.3 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 31/92 (33%), Positives = 48/92 (52%)
Query: 44 RELEGHQGCVNAISW--NSK-GS-LLISGSDDTHINVWSYSSRKL-LHSIETGHSANVFC 98
++ H+ + ++ W NS GS L+ISGS D + VW +S +L L S GH V
Sbjct: 10 KQEHAHEDAIWSVGWGKNSNDGSELVISGSLDDLVKVWKWSDERLELQSTLEGHQLGVVS 69
Query: 99 TKFVPETSDELVVSGAGDAEVRLFNLSRFSGR 130
P S ++ S + DA +RL++L SG+
Sbjct: 70 VDVSP--SGNIMASSSLDAHIRLWDLE--SGK 97
Score = 83 (34.3 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 23/71 (32%), Positives = 38/71 (53%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW-T 697
G Y+ASG+ DG I++ TG+L+ L G + + P ++ T+ D IKI+
Sbjct: 160 GKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYEV 219
Query: 698 PSASVPSIVSG 708
AS+ + +SG
Sbjct: 220 QHASLAATLSG 230
Score = 72 (30.4 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 20/59 (33%), Positives = 28/59 (47%)
Query: 642 IASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIWTPSA 700
+ + SDDG I+E Q L L G + V V P D +S D ++K+W SA
Sbjct: 205 LVTASDDGYIKIYEVQHASLAATLSGHGSWVLNVAFSPDDTHFVSSSSDKSVKVWDVSA 263
>UNIPROTKB|Q08E38 [details] [associations]
symbol:PRPF19 "Pre-mRNA-processing factor 19" species:9913
"Bos taurus" [GO:0000974 "Prp19 complex" evidence=ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005819 "spindle" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0048711 "positive regulation of astrocyte differentiation"
evidence=IEA] [GO:0048026 "positive regulation of mRNA splicing,
via spliceosome" evidence=IEA] [GO:0045665 "negative regulation of
neuron differentiation" evidence=IEA] [GO:0042802 "identical
protein binding" evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin
ligase activity" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0008610 "lipid biosynthetic process"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0001833 "inner cell mass cell proliferation" evidence=IEA]
[GO:0000245 "spliceosomal complex assembly" evidence=IEA]
[GO:0000209 "protein polyubiquitination" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 GO:GO:0005634
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 GO:GO:0003677 GO:GO:0016607
GO:GO:0006281 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR000772 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0000209 GO:GO:0000398 GO:GO:0071013 GO:GO:0000151
GO:GO:0000245 GO:GO:0034450 GO:GO:0000974
GeneTree:ENSGT00700000104487 KO:K10599 InterPro:IPR013915
Pfam:PF08606 HOGENOM:HOG000177308 OMA:QWQELKV EMBL:BC123437
IPI:IPI00702434 RefSeq:NP_001069108.1 UniGene:Bt.62928
ProteinModelPortal:Q08E38 STRING:Q08E38 PRIDE:Q08E38
Ensembl:ENSBTAT00000019100 GeneID:513868 KEGG:bta:513868 CTD:27339
HOVERGEN:HBG053697 InParanoid:Q08E38 OrthoDB:EOG4V6ZGG
NextBio:20871070 Uniprot:Q08E38
Length = 504
Score = 113 (44.8 bits), Expect = 1.9e-06, Sum P(3) = 1.9e-06
Identities = 26/80 (32%), Positives = 39/80 (48%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEA--VVNCVQCHPFDCVVATSGIDNTIKIW 696
GDY+ S SDD W + QTGR++ + + + + C Q HP + T +D+ IKIW
Sbjct: 318 GDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHPDGLIFGTGTMDSQIKIW 377
Query: 697 TPSASVPSIVSGGAAGPDTA 716
G +GP T+
Sbjct: 378 DLKERTNVANFPGHSGPITS 397
Score = 80 (33.2 bits), Expect = 1.9e-06, Sum P(3) = 1.9e-06
Identities = 20/64 (31%), Positives = 38/64 (59%)
Query: 65 LISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPETSDELVVSGAGDAEVRLFNL 124
+++G D ++ V+ SS ++L +++ GH+ V F P S ELV S + DA +R++++
Sbjct: 237 ILTGGADKNVVVFDKSSEQILATLK-GHTKKVTSVVFHP--SQELVFSASPDATIRIWSV 293
Query: 125 SRFS 128
S
Sbjct: 294 PNAS 297
Score = 62 (26.9 bits), Expect = 9.8e-05, Sum P(2) = 9.8e-05
Identities = 21/92 (22%), Positives = 39/92 (42%)
Query: 7 HDGSIYDML--DTRHTDTRPDVNHSLQMHSSLVRRLSQE--RELEGHQGCVNAISWNSKG 62
H SI +L D +DT + + + + S++ L+GH V ++ ++
Sbjct: 217 HSASIPGILALDLCPSDTNKILTGGADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQ 276
Query: 63 SLLISGSDDTHINVWSYSSRKLLHSIETGHSA 94
L+ S S D I +WS + + + SA
Sbjct: 277 ELVFSASPDATIRIWSVPNASCVQVVRAHESA 308
Score = 40 (19.1 bits), Expect = 1.9e-06, Sum P(3) = 1.9e-06
Identities = 9/25 (36%), Positives = 16/25 (64%)
Query: 22 TRPDVNHSLQMHSSLVR---RLSQE 43
TR +++H+L H + R RL++E
Sbjct: 99 TRQELSHALYQHDAACRVIARLTKE 123
>UNIPROTKB|B2CCY7 [details] [associations]
symbol:PRPF19 "Nuclear matrix protein 200" species:9823
"Sus scrofa" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0048711 "positive regulation of astrocyte
differentiation" evidence=IEA] [GO:0048026 "positive regulation of
mRNA splicing, via spliceosome" evidence=IEA] [GO:0045665 "negative
regulation of neuron differentiation" evidence=IEA] [GO:0042802
"identical protein binding" evidence=IEA] [GO:0034450
"ubiquitin-ubiquitin ligase activity" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA] [GO:0008610 "lipid biosynthetic
process" evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0001833 "inner cell mass cell proliferation" evidence=IEA]
[GO:0000974 "Prp19 complex" evidence=IEA] [GO:0000245 "spliceosomal
complex assembly" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA] [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 SMART:SM00504
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR000772 PROSITE:PS50231 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0000209 GO:GO:0071013 GO:GO:0000151
GO:GO:0000245 GO:GO:0034450 GeneTree:ENSGT00700000104487 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 OMA:QWQELKV
CTD:27339 HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG EMBL:CU861565
EMBL:EU417752 EMBL:AB282747 RefSeq:NP_001121929.1 UniGene:Ssc.44045
STRING:B2CCY7 Ensembl:ENSSSCT00000014327 GeneID:100144769
KEGG:ssc:100144769 Uniprot:B2CCY7
Length = 504
Score = 113 (44.8 bits), Expect = 1.9e-06, Sum P(3) = 1.9e-06
Identities = 26/80 (32%), Positives = 39/80 (48%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEA--VVNCVQCHPFDCVVATSGIDNTIKIW 696
GDY+ S SDD W + QTGR++ + + + + C Q HP + T +D+ IKIW
Sbjct: 318 GDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHPDGLIFGTGTMDSQIKIW 377
Query: 697 TPSASVPSIVSGGAAGPDTA 716
G +GP T+
Sbjct: 378 DLKERTNVANFPGHSGPITS 397
Score = 80 (33.2 bits), Expect = 1.9e-06, Sum P(3) = 1.9e-06
Identities = 20/64 (31%), Positives = 38/64 (59%)
Query: 65 LISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPETSDELVVSGAGDAEVRLFNL 124
+++G D ++ V+ SS ++L +++ GH+ V F P S ELV S + DA +R++++
Sbjct: 237 ILTGGADKNVVVFDKSSEQILATLK-GHTKKVTSVVFHP--SQELVFSASPDATIRIWSV 293
Query: 125 SRFS 128
S
Sbjct: 294 PNAS 297
Score = 62 (26.9 bits), Expect = 9.8e-05, Sum P(2) = 9.8e-05
Identities = 21/92 (22%), Positives = 39/92 (42%)
Query: 7 HDGSIYDML--DTRHTDTRPDVNHSLQMHSSLVRRLSQE--RELEGHQGCVNAISWNSKG 62
H SI +L D +DT + + + + S++ L+GH V ++ ++
Sbjct: 217 HSASIPGILALDLCPSDTNKILTGGADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQ 276
Query: 63 SLLISGSDDTHINVWSYSSRKLLHSIETGHSA 94
L+ S S D I +WS + + + SA
Sbjct: 277 ELVFSASPDATIRIWSVPNASCVQVVRAHESA 308
Score = 40 (19.1 bits), Expect = 1.9e-06, Sum P(3) = 1.9e-06
Identities = 9/25 (36%), Positives = 16/25 (64%)
Query: 22 TRPDVNHSLQMHSSLVR---RLSQE 43
TR +++H+L H + R RL++E
Sbjct: 99 TRQELSHALYQHDAACRVIARLTKE 123
>UNIPROTKB|Q9NVX2 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9606
"Homo sapiens" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602
OrthoDB:EOG4BCDMS EMBL:AK001320 EMBL:AB209111 EMBL:AC022916
EMBL:BC002884 EMBL:BC012075 EMBL:AJ005257 IPI:IPI00018196
IPI:IPI00556116 RefSeq:NP_001014445.1 RefSeq:NP_060566.2
UniGene:Hs.85570 ProteinModelPortal:Q9NVX2 SMR:Q9NVX2 IntAct:Q9NVX2
MINT:MINT-1474299 STRING:Q9NVX2 PhosphoSite:Q9NVX2 DMDM:296439488
SWISS-2DPAGE:Q9NVX2 PaxDb:Q9NVX2 PRIDE:Q9NVX2
Ensembl:ENST00000360831 Ensembl:ENST00000442241 GeneID:54475
KEGG:hsa:54475 UCSC:uc002hiy.1 UCSC:uc002hiz.1
GeneCards:GC17M033458 HGNC:HGNC:19889 HPA:HPA018807
neXtProt:NX_Q9NVX2 PharmGKB:PA142671263 GenomeRNAi:54475
NextBio:56780 ArrayExpress:Q9NVX2 Bgee:Q9NVX2 CleanEx:HS_NLE1
Genevestigator:Q9NVX2 GermOnline:ENSG00000073536 Uniprot:Q9NVX2
Length = 485
Score = 97 (39.2 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 20/62 (32%), Positives = 35/62 (56%)
Query: 636 GQRGDYIASGSDDGRWFIWEK-QTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIK 694
GQ + + SGSDD F+W + + + + G +A++N V P +VA++ D +IK
Sbjct: 338 GQGPERLVSGSDDFTLFLWSPAEDKKPLTRMTGHQALINQVLFSPDSRIVASASFDKSIK 397
Query: 695 IW 696
+W
Sbjct: 398 LW 399
Score = 95 (38.5 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 40/136 (29%), Positives = 65/136 (47%)
Query: 47 EGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP-ET 105
+GH+ V +ISW+ G L SG + I +W S+ K + GHS + + P
Sbjct: 153 KGHRHWVLSISWSPDGRKLASGCKNGQILLWDPSTGKQVGRTLAGHSKWITGLSWEPLHA 212
Query: 106 SDEL--VVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHVV 163
+ E V S + D VR+++ + +GR + +T HT+ V L G ++
Sbjct: 213 NPECRYVASSSKDGSVRIWDTT--AGRC--ERILTG------HTQSVTCL--RWGGDGLL 260
Query: 164 WSASEDGTL---RQHD 176
+SAS+D T+ R HD
Sbjct: 261 YSASQDRTIKVWRAHD 276
Score = 91 (37.1 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 39/151 (25%), Positives = 68/151 (45%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
LEGH V +++++ G L SGS DT + W S+ + H GH V + P+
Sbjct: 110 LEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLST-ETPHFTCKGHRHWVLSISWSPD- 167
Query: 106 SDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEV--GNPHV- 162
+ SG + ++ L++ S +G+ + H++ + L+ E NP
Sbjct: 168 -GRKLASGCKNGQILLWDPS--TGKQVGRTLAG-------HSKWITGLSWEPLHANPECR 217
Query: 163 -VWSASEDGTLRQHDFRQGSSCPPAGSSHQE 192
V S+S+DG++R D G C + H +
Sbjct: 218 YVASSSKDGSVRIWDTTAGR-CERILTGHTQ 247
Score = 78 (32.5 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 21/84 (25%), Positives = 40/84 (47%)
Query: 44 RELEGHQGCVNAISW-----NSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFC 98
R L GH + +SW N + + S S D + +W ++ + I TGH+ +V C
Sbjct: 193 RTLAGHSKWITGLSWEPLHANPECRYVASSSKDGSVRIWDTTAGRC-ERILTGHTQSVTC 251
Query: 99 TKFVPETSDELVVSGAGDAEVRLF 122
++ D L+ S + D ++++
Sbjct: 252 LRW---GGDGLLYSASQDRTIKVW 272
Score = 75 (31.5 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 20/54 (37%), Positives = 24/54 (44%)
Query: 43 ERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIET-GHSAN 95
ER L GH V + W G LL S S D I VW L +++ GH N
Sbjct: 239 ERILTGHTQSVTCLRWGGDG-LLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVN 291
Score = 72 (30.4 bits), Expect = 0.00072, Sum P(2) = 0.00072
Identities = 23/96 (23%), Positives = 42/96 (43%)
Query: 642 IASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIWTPSAS 701
+AS S D +W+ +TG+ + L G A V + ++ + D+T+K+W A
Sbjct: 387 VASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQ 446
Query: 702 VPSIVSGGAAGPDTADVLEAMESNQRKLSRNREHSL 737
++ G A D ++ QR S ++ L
Sbjct: 447 KLAMDLPGHA--DEVYAVDWSPDGQRVASGGKDKCL 480
>UNIPROTKB|F1P3E7 [details] [associations]
symbol:WDR26 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
GeneTree:ENSGT00530000063585 PROSITE:PS50897 InterPro:IPR006595
SMART:SM00668 OMA:IRGQFYQ EMBL:AADN02012163 EMBL:AADN02012164
EMBL:AADN02012165 IPI:IPI00585040 Ensembl:ENSGALT00000015154
Uniprot:F1P3E7
Length = 684
Score = 128 (50.1 bits), Expect = 2.0e-06, Sum P(3) = 2.0e-06
Identities = 27/70 (38%), Positives = 41/70 (58%)
Query: 634 FLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHP-FDCVVATSGIDNT 692
F G D+IASGS+D + +IW K++ I L G VNCV +P ++A++ D T
Sbjct: 601 FGGHNEDFIASGSEDHKVYIWHKRSELPIAELTGHTRTVNCVSWNPQIPSMMASASDDGT 660
Query: 693 IKIWTPSASV 702
++IW P+ V
Sbjct: 661 VRIWGPAPFV 670
Score = 69 (29.3 bits), Expect = 2.0e-06, Sum P(3) = 2.0e-06
Identities = 22/72 (30%), Positives = 39/72 (54%)
Query: 58 WNSKGSLLISGSDDTHINVWSYS----SRKLLHSIETGHSANVFCTKFVPETSDELVVSG 113
+++ G+ L +GS DT + +W KLL ++E GH+ V + P+ + LV G
Sbjct: 386 FSNDGTKLATGSKDTTVIIWQVDPDTHQLKLLKTLE-GHAYGVSYIAWSPD-DNYLVACG 443
Query: 114 AGD-AEVRLFNL 124
D +E+ L+N+
Sbjct: 444 PDDCSELWLWNV 455
Score = 63 (27.2 bits), Expect = 7.9e-06, Sum P(3) = 7.9e-06
Identities = 15/63 (23%), Positives = 33/63 (52%)
Query: 44 RELEGHQGCVNAISWNSKGSLLIS-GSDD-THINVWSYSSRKLLHSIETGHSANVFCTKF 101
+ LEGH V+ I+W+ + L++ G DD + + +W+ + +L + H ++ +
Sbjct: 418 KTLEGHAYGVSYIAWSPDDNYLVACGPDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAW 477
Query: 102 VPE 104
P+
Sbjct: 478 NPD 480
Score = 45 (20.9 bits), Expect = 0.00047, Sum P(3) = 0.00047
Identities = 5/22 (22%), Positives = 13/22 (59%)
Query: 47 EGHQGCVNAISWNSKGSLLISG 68
+ H+ + +++WN G ++G
Sbjct: 466 QSHEDSLTSVAWNPDGKRFVTG 487
Score = 40 (19.1 bits), Expect = 2.0e-06, Sum P(3) = 2.0e-06
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 286 TFSPNGEEVLLSYSGEHVYLMDV 308
T S NG LL+ + + V+L D+
Sbjct: 556 TISKNGRLALLNVATQGVHLWDL 578
Score = 37 (18.1 bits), Expect = 4.0e-06, Sum P(3) = 4.0e-06
Identities = 8/28 (28%), Positives = 14/28 (50%)
Query: 282 LTHVTFSPNGEEVLLSYSGEHVYLMDVN 309
LT V ++P+G+ + Y D+N
Sbjct: 472 LTSVAWNPDGKRFVTGGQRGQFYQCDLN 499
>TAIR|locus:2043929 [details] [associations]
symbol:AT2G43770 "AT2G43770" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE EMBL:AC002333 UniGene:At.66405 EMBL:AY093182
EMBL:BT008828 IPI:IPI00529336 PIR:C84870 RefSeq:NP_181905.1
ProteinModelPortal:O22826 SMR:O22826 IntAct:O22826 STRING:O22826
PaxDb:O22826 PRIDE:O22826 EnsemblPlants:AT2G43770.1 GeneID:818980
KEGG:ath:AT2G43770 TAIR:At2g43770 InParanoid:O22826
PhylomeDB:O22826 ProtClustDB:CLSN2683090 ArrayExpress:O22826
Genevestigator:O22826 Uniprot:O22826
Length = 343
Score = 106 (42.4 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 38/135 (28%), Positives = 60/135 (44%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L GH V + +N G+L+ SGS D I +W + GH + + +
Sbjct: 49 LSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHWTSDG 108
Query: 106 SDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQC-HTRRVKKLAVEVGNPHVVW 164
S +VS + D VR +++ +G+ + A S + C TRR G P ++
Sbjct: 109 SQ--IVSASPDKTVRAWDVE--TGKQIKKMAEHSSFVNSCCPTRR--------GPPLII- 155
Query: 165 SASEDGTLRQHDFRQ 179
S S+DGT + D RQ
Sbjct: 156 SGSDDGTAKLWDMRQ 170
Score = 81 (33.6 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 32/132 (24%), Positives = 58/132 (43%)
Query: 637 QRGD-YIASGSDDGRWFIWE-KQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIK 694
+RG I SGSDDG +W+ +Q G + D+ + V + T G+DN +K
Sbjct: 148 RRGPPLIISGSDDGTAKLWDMRQRGAI--QTFPDKYQITAVSFSDAADKIFTGGVDNDVK 205
Query: 695 IWT---PSASVP-----SIVSGGAAGPDTADVLEAMESNQRKLSRNREHSLSYELLERF- 745
+W A++ ++G + PD + +L N+ + R ++ ++ F
Sbjct: 206 VWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFE 265
Query: 746 -HMHEFSEGSLR 756
H H F + L+
Sbjct: 266 GHQHNFEKNLLK 277
Score = 73 (30.8 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 23/86 (26%), Positives = 36/86 (41%)
Query: 614 DMKQRYVGHCNVGTD---IKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEA 670
DM+QR G D I SF D I +G D +W+ + G L G +
Sbjct: 167 DMRQR--GAIQTFPDKYQITAVSF-SDAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQD 223
Query: 671 VVNCVQCHPFDCVVATSGIDNTIKIW 696
+ + P + T+G+DN + +W
Sbjct: 224 TITGMSLSPDGSYLLTNGMDNKLCVW 249
Score = 73 (30.8 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 26/93 (27%), Positives = 41/93 (44%)
Query: 603 DRIPYQPETVIDMKQRYVGHC-NVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRL 661
D PY P+ + + GH N ++ + S+ G + +GS D IW+ + R
Sbjct: 250 DMRPYAPQN--RCVKIFEGHQHNFEKNLLKCSW-SPDGTKVTAGSSDRMVHIWDTTSRRT 306
Query: 662 IKMLLGDEAVVN-CVQCHPFDCVVATSGIDNTI 693
I L G VN CV HP + ++ + D I
Sbjct: 307 IYKLPGHTGSVNECV-FHPTEPIIGSCSSDKNI 338
>UNIPROTKB|E2R8L3 [details] [associations]
symbol:PRPF19 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR000772
PROSITE:PS50231 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 GeneTree:ENSGT00700000104487 InterPro:IPR013915
Pfam:PF08606 OMA:QWQELKV EMBL:AAEX03011680 EMBL:AAEX03011681
Ensembl:ENSCAFT00000026060 Uniprot:E2R8L3
Length = 513
Score = 113 (44.8 bits), Expect = 2.0e-06, Sum P(3) = 2.0e-06
Identities = 26/80 (32%), Positives = 39/80 (48%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEA--VVNCVQCHPFDCVVATSGIDNTIKIW 696
GDY+ S SDD W + QTGR++ + + + + C Q HP + T +D+ IKIW
Sbjct: 327 GDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHPDGLIFGTGTMDSQIKIW 386
Query: 697 TPSASVPSIVSGGAAGPDTA 716
G +GP T+
Sbjct: 387 DLKERTNVANFPGHSGPITS 406
Score = 80 (33.2 bits), Expect = 2.0e-06, Sum P(3) = 2.0e-06
Identities = 20/64 (31%), Positives = 38/64 (59%)
Query: 65 LISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPETSDELVVSGAGDAEVRLFNL 124
+++G D ++ V+ SS ++L +++ GH+ V F P S ELV S + DA +R++++
Sbjct: 246 ILTGGADKNVVVFDKSSEQILATLK-GHTKKVTSVVFHP--SQELVFSASPDATIRIWSV 302
Query: 125 SRFS 128
S
Sbjct: 303 PNAS 306
Score = 61 (26.5 bits), Expect = 0.00016, Sum P(3) = 0.00016
Identities = 13/49 (26%), Positives = 23/49 (46%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSA 94
L+GH V ++ ++ L+ S S D I +WS + + + SA
Sbjct: 269 LKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVPNASCVQVVRAHESA 317
Score = 40 (19.1 bits), Expect = 2.0e-06, Sum P(3) = 2.0e-06
Identities = 9/25 (36%), Positives = 16/25 (64%)
Query: 22 TRPDVNHSLQMHSSLVR---RLSQE 43
TR +++H+L H + R RL++E
Sbjct: 108 TRQELSHALYQHDAACRVIARLTKE 132
>TAIR|locus:2202129 [details] [associations]
symbol:AT1G11160 "AT1G11160" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002684 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0080008 GO:GO:0008352 PANTHER:PTHR19845 IPI:IPI00528177
RefSeq:NP_172582.2 UniGene:At.43445 ProteinModelPortal:F4I7E1
SMR:F4I7E1 PRIDE:F4I7E1 EnsemblPlants:AT1G11160.1 GeneID:837657
KEGG:ath:AT1G11160 OMA:DETHATQ Uniprot:F4I7E1
Length = 1021
Score = 106 (42.4 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 29/90 (32%), Positives = 48/90 (53%)
Query: 36 LVRRLSQERELEGHQGCVNAISWNSKGS-LLISGSDDTHINVWSYSSRKLLHSIETGHSA 94
+ +R + +E H G VN +S K S LL++G DD +N+WS S+ GH++
Sbjct: 1 MAKRGYKLQEFVAHSGNVNCLSIGKKTSRLLLTGGDDYKVNLWSIGKTTSPMSL-CGHTS 59
Query: 95 NVFCTKFVPETSDELVVSGAGDAEVRLFNL 124
V F E + LV++GA ++L++L
Sbjct: 60 PVDSVAFNSE--EVLVLAGASSGVIKLWDL 87
Score = 93 (37.8 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 23/80 (28%), Positives = 35/80 (43%)
Query: 617 QRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQ 676
Q Y GH G I F G ++ SG D +W+ G+L+ E + +
Sbjct: 136 QTYKGHTR-G--ISTIEF-SPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLD 191
Query: 677 CHPFDCVVATSGIDNTIKIW 696
HP + ++AT D T+K W
Sbjct: 192 FHPLEFLLATGSADRTVKFW 211
Score = 91 (37.1 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 17/62 (27%), Positives = 33/62 (53%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIWTP 698
G+++ASGS D +W+ + I+ G ++ ++ P V + G+DN +K+W
Sbjct: 112 GEFLASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDL 171
Query: 699 SA 700
+A
Sbjct: 172 TA 173
Score = 82 (33.9 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 24/122 (19%), Positives = 53/122 (43%)
Query: 642 IASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW-TPSA 700
+ +G+ G +W+ + ++++ G + + V+ HPF +A+ D +++W T
Sbjct: 73 VLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRVWDTRKK 132
Query: 701 SVPSIVSGGAAGPDTADVLEAMESNQRKLSRNREHSLS-YELLERFHMHEFS--EGSLRP 757
G G T +E + +S ++ + ++L +HEF EG +R
Sbjct: 133 GCIQTYKGHTRGIST---IEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRS 189
Query: 758 FE 759
+
Sbjct: 190 LD 191
>UNIPROTKB|B4DZI8 [details] [associations]
symbol:COPB2 "Coatomer protein complex, subunit beta 2
(Beta prime), isoform CRA_b" species:9606 "Homo sapiens"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0015629 "actin
cytoskeleton" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005794
GO:GO:0006886 GO:GO:0030117 GO:GO:0016192 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0005198 GO:GO:0015629 EMBL:CH471052
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000163444
HOVERGEN:HBG051076 InterPro:IPR016453 PIRSF:PIRSF005567
UniGene:Hs.681616 HGNC:HGNC:2232 ChiTaRS:COPB2 EMBL:AC024933
EMBL:AK302943 IPI:IPI00789674 SMR:B4DZI8 STRING:B4DZI8
Ensembl:ENST00000507777 Uniprot:B4DZI8
Length = 877
Score = 151 (58.2 bits), Expect = 2.3e-06, Sum P(3) = 2.3e-06
Identities = 31/84 (36%), Positives = 51/84 (60%)
Query: 46 LEGHQGCVNAISWNSKGS--LLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP 103
LEGH+ VN I + S G LISG+DD + +W Y ++ + ++E GH+ NV C F P
Sbjct: 152 LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLE-GHAQNVSCASFHP 210
Query: 104 ETSDELVVSGAGDAEVRLFNLSRF 127
E ++++G+ D VR+++ S +
Sbjct: 211 ELP--IIITGSEDGTVRIWHSSTY 232
Score = 98 (39.6 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 22/63 (34%), Positives = 32/63 (50%)
Query: 639 GD--YIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW 696
GD Y+ SG+DD IW+ Q ++ L G V+C HP ++ T D T++IW
Sbjct: 168 GDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIW 227
Query: 697 TPS 699
S
Sbjct: 228 HSS 230
Score = 91 (37.1 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 30/132 (22%), Positives = 67/132 (50%)
Query: 53 VNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPETSDELVVS 112
V A + ++ + +++G+DD I V++Y++ + +H E HS + C P + +++
Sbjct: 31 VRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEA-HSDYIRCIAVHP--TQPFILT 87
Query: 113 GAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHVVWSASEDGTL 172
+ D ++L++ D + S +++ HT V ++ + + + SAS D T+
Sbjct: 88 SSDDMLIKLWDW---------DKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTI 138
Query: 173 RQHDFRQGSSCP 184
+ ++ GSS P
Sbjct: 139 KV--WQLGSSSP 148
Score = 46 (21.3 bits), Expect = 2.3e-06, Sum P(3) = 2.3e-06
Identities = 8/35 (22%), Positives = 19/35 (54%)
Query: 269 PMHLSEHGRSSLHLTHVTFSPNGEEVLLSYSGEHV 303
P+ + + G ++ + +PNG V++ GE++
Sbjct: 313 PLAVKDMGSCEIYPQTIQHNPNGRFVVVCGDGEYI 347
Score = 42 (19.8 bits), Expect = 2.3e-06, Sum P(3) = 2.3e-06
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 416 KRKWKNDAQMAIRDC 430
++KWK A++AI C
Sbjct: 638 EQKWKQLAELAISKC 652
Score = 39 (18.8 bits), Expect = 4.6e-06, Sum P(3) = 4.6e-06
Identities = 13/44 (29%), Positives = 24/44 (54%)
Query: 356 VATGLGKCRMLVEIARNSLEEGKH-----PYY--G-IEACNEVL 391
+AT G M+ ++A + +GK+ Y+ G ++AC E+L
Sbjct: 673 LATASGNANMVNKLAEGAERDGKNNVAFMSYFLQGKVDACLELL 716
>UNIPROTKB|F1N9W1 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001570 "vasculogenesis" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] [GO:0034644 "cellular response to
UV" evidence=IEA] [GO:0045741 "positive regulation of epidermal
growth factor-activated receptor activity" evidence=IEA]
[GO:0050821 "protein stabilization" evidence=IEA] [GO:0070374
"positive regulation of ERK1 and ERK2 cascade" evidence=IEA]
[GO:2000060 "positive regulation of protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:AADN02016174 IPI:IPI00582326
Ensembl:ENSGALT00000016428 Uniprot:F1N9W1
Length = 587
Score = 105 (42.0 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 27/83 (32%), Positives = 49/83 (59%)
Query: 44 RELEGHQGCVNAISWNS--KGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKF 101
R L GH G V W+S + +++ISGS D + VW+ + + +H++ GH++ V C
Sbjct: 295 RTLVGHTGGV----WSSQMRDNIIISGSTDRTLKVWNAETGECIHTLY-GHTSTVRCMHL 349
Query: 102 VPETSDELVVSGAGDAEVRLFNL 124
++ VVSG+ DA +R++++
Sbjct: 350 ----HEKRVVSGSRDATLRVWDI 368
Score = 98 (39.6 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 24/84 (28%), Positives = 45/84 (53%)
Query: 40 LSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCT 99
L + L+GH V G+ ++SGSDD + VWS + K L ++ GH+ V+ +
Sbjct: 250 LKSPKVLKGHDDHV-ITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTL-VGHTGGVWSS 307
Query: 100 KFVPETSDELVVSGAGDAEVRLFN 123
+ D +++SG+ D ++++N
Sbjct: 308 QM----RDNIIISGSTDRTLKVWN 327
Score = 95 (38.5 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 21/58 (36%), Positives = 32/58 (55%)
Query: 642 IASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGI-DNTIKIWTP 698
+ SGS D +W+ +TG+ + +L+G A V CVQ +D SG D +K+W P
Sbjct: 354 VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQ---YDGRRVVSGAYDFMVKVWDP 408
Score = 90 (36.7 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 23/80 (28%), Positives = 44/80 (55%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L GH V + ++ G ++SG+ D + VW + LH+++ GH+ V+ +F
Sbjct: 377 LMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETETCLHTLQ-GHTNRVYSLQF---- 429
Query: 106 SDEL-VVSGAGDAEVRLFNL 124
D + VVSG+ D +R++++
Sbjct: 430 -DGIHVVSGSLDTSIRVWDV 448
Score = 87 (35.7 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 24/81 (29%), Positives = 41/81 (50%)
Query: 638 RGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDC-VVATSGIDNTIKIW 696
+ + + SG+ D IW+ +TG+ ++ L G + V C F+ V TS D T+K+W
Sbjct: 470 KDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLW 529
Query: 697 TPSAS--VPSIV---SGGAAG 712
+ ++V SGG+ G
Sbjct: 530 DLKTGEFIRNLVTLESGGSGG 550
Score = 86 (35.3 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 25/78 (32%), Positives = 39/78 (50%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L GH V + + K ++SGS D + VW + + LH + GH A V C ++
Sbjct: 337 LYGHTSTVRCMHLHEKR--VVSGSRDATLRVWDIETGQCLHVL-MGHVAAVRCVQY---- 389
Query: 106 SDELVVSGAGDAEVRLFN 123
VVSGA D V++++
Sbjct: 390 DGRRVVSGAYDFMVKVWD 407
Score = 85 (35.0 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 17/58 (29%), Positives = 33/58 (56%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW 696
G ++ SGS D +W+ +TG I L G +++ + ++ D ++ + D+T+KIW
Sbjct: 431 GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK--DNILVSGNADSTVKIW 486
>MGI|MGI:1354962 [details] [associations]
symbol:Copb2 "coatomer protein complex, subunit beta 2 (beta
prime)" species:10090 "Mus musculus" [GO:0000139 "Golgi membrane"
evidence=ISO] [GO:0005080 "protein kinase C binding" evidence=ISO]
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=ISA;IDA] [GO:0006810 "transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0006891
"intra-Golgi vesicle-mediated transport" evidence=ISO] [GO:0015031
"protein transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030126
"COPI vesicle coat" evidence=ISO] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 MGI:MGI:1354962
GO:GO:0005794 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0005198 GO:GO:0015629 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006891 GO:GO:0030126
CTD:9276 HOGENOM:HOG000163444 HOVERGEN:HBG051076 OrthoDB:EOG43R3KZ
InterPro:IPR016453 PIRSF:PIRSF005567 GeneTree:ENSGT00640000091529
OMA:LRNKAFG EMBL:AK088064 EMBL:AK153352 EMBL:AF043120 EMBL:BC006675
IPI:IPI00115097 RefSeq:NP_056642.1 UniGene:Mm.400464
ProteinModelPortal:O55029 SMR:O55029 IntAct:O55029 STRING:O55029
PhosphoSite:O55029 PaxDb:O55029 PRIDE:O55029
Ensembl:ENSMUST00000035033 GeneID:50797 KEGG:mmu:50797
UCSC:uc009rdm.1 InParanoid:O55029 NextBio:307805 Bgee:O55029
Genevestigator:O55029 GermOnline:ENSMUSG00000032458 Uniprot:O55029
Length = 905
Score = 151 (58.2 bits), Expect = 2.6e-06, Sum P(3) = 2.6e-06
Identities = 31/84 (36%), Positives = 51/84 (60%)
Query: 46 LEGHQGCVNAISWNSKGS--LLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP 103
LEGH+ VN I + S G LISG+DD + +W Y ++ + ++E GH+ NV C F P
Sbjct: 181 LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLE-GHAQNVSCASFHP 239
Query: 104 ETSDELVVSGAGDAEVRLFNLSRF 127
E ++++G+ D VR+++ S +
Sbjct: 240 ELP--IIITGSEDGTVRIWHSSTY 261
Score = 98 (39.6 bits), Expect = 8.9e-06, Sum P(2) = 8.9e-06
Identities = 22/63 (34%), Positives = 32/63 (50%)
Query: 639 GD--YIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW 696
GD Y+ SG+DD IW+ Q ++ L G V+C HP ++ T D T++IW
Sbjct: 197 GDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIW 256
Query: 697 TPS 699
S
Sbjct: 257 HSS 259
Score = 94 (38.1 bits), Expect = 8.9e-06, Sum P(2) = 8.9e-06
Identities = 40/197 (20%), Positives = 88/197 (44%)
Query: 39 RLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFC 98
RL +R+L V ++ + +++ + + VW++ ++ L+ + E V
Sbjct: 4 RLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVC-DLPVRA 62
Query: 99 TKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVG 158
KFV + VV+GA D ++R+FN N + +++ H+ ++ +AV
Sbjct: 63 AKFVARKN--WVVTGADDMQIRVFNY----------NTLERVHMFEAHSDYIRCIAVHPT 110
Query: 159 NPHVVWSASEDGTLRQHDFRQGSSCPPAGSSHQE-CRNILLDLRCGAKRSLADPPKQTLS 217
P ++ S S+D ++ D+ + SC H I+++ + + + A + +
Sbjct: 111 QPFILTS-SDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDR---T 166
Query: 218 LKSCDISSTRPHLLLVG 234
+K + S+ P+ L G
Sbjct: 167 IKVWQLGSSSPNFTLEG 183
Score = 46 (21.3 bits), Expect = 2.6e-06, Sum P(3) = 2.6e-06
Identities = 8/35 (22%), Positives = 19/35 (54%)
Query: 269 PMHLSEHGRSSLHLTHVTFSPNGEEVLLSYSGEHV 303
P+ + + G ++ + +PNG V++ GE++
Sbjct: 342 PLAVKDMGSCEIYPQTIQHNPNGRFVVVCGDGEYI 376
Score = 42 (19.8 bits), Expect = 2.6e-06, Sum P(3) = 2.6e-06
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 416 KRKWKNDAQMAIRDC 430
++KWK A++AI C
Sbjct: 667 EQKWKQLAELAISKC 681
Score = 37 (18.1 bits), Expect = 8.2e-06, Sum P(3) = 8.2e-06
Identities = 13/44 (29%), Positives = 24/44 (54%)
Query: 356 VATGLGKCRMLVEIARNSLEEGKH-----PYY--G-IEACNEVL 391
+AT G M+ ++A + +GK+ Y+ G ++AC E+L
Sbjct: 702 LATASGNASMVNKLAEGAERDGKNNVAFMSYFLQGKLDACLELL 745
>UNIPROTKB|P35606 [details] [associations]
symbol:COPB2 "Coatomer subunit beta'" species:9606 "Homo
sapiens" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0006890 "retrograde vesicle-mediated transport, Golgi to ER"
evidence=TAS] [GO:0030126 "COPI vesicle coat" evidence=IDA]
[GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=IDA]
[GO:0005829 "cytosol" evidence=TAS] [GO:0016044 "cellular membrane
organization" evidence=TAS] [GO:0048205 "COPI coating of Golgi
vesicle" evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0015629 "actin
cytoskeleton" evidence=IDA] Reactome:REACT_11123 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 GO:GO:0006886 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005198 GO:GO:0015629
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006891
GO:GO:0030126 GO:GO:0048205 GO:GO:0006890 CTD:9276
HOGENOM:HOG000163444 HOVERGEN:HBG051076 OrthoDB:EOG43R3KZ
InterPro:IPR016453 PIRSF:PIRSF005567 OMA:LRNKAFG EMBL:X70476
EMBL:BC000326 IPI:IPI00220219 PIR:S35342 RefSeq:NP_004757.1
UniGene:Hs.681616 ProteinModelPortal:P35606 SMR:P35606
DIP:DIP-27603N IntAct:P35606 MINT:MINT-5000992 STRING:P35606
PhosphoSite:P35606 DMDM:544076 PaxDb:P35606 PeptideAtlas:P35606
PRIDE:P35606 DNASU:9276 Ensembl:ENST00000333188 GeneID:9276
KEGG:hsa:9276 UCSC:uc003etf.4 GeneCards:GC03M139076 HGNC:HGNC:2232
HPA:HPA036867 MIM:606990 neXtProt:NX_P35606 PharmGKB:PA26748
InParanoid:P35606 PhylomeDB:P35606 ChiTaRS:COPB2 GenomeRNAi:9276
NextBio:34765 ArrayExpress:P35606 Bgee:P35606 CleanEx:HS_COPB2
Genevestigator:P35606 GermOnline:ENSG00000184432 Uniprot:P35606
Length = 906
Score = 151 (58.2 bits), Expect = 2.6e-06, Sum P(3) = 2.6e-06
Identities = 31/84 (36%), Positives = 51/84 (60%)
Query: 46 LEGHQGCVNAISWNSKGS--LLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP 103
LEGH+ VN I + S G LISG+DD + +W Y ++ + ++E GH+ NV C F P
Sbjct: 181 LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLE-GHAQNVSCASFHP 239
Query: 104 ETSDELVVSGAGDAEVRLFNLSRF 127
E ++++G+ D VR+++ S +
Sbjct: 240 ELP--IIITGSEDGTVRIWHSSTY 261
Score = 98 (39.6 bits), Expect = 8.9e-06, Sum P(2) = 8.9e-06
Identities = 22/63 (34%), Positives = 32/63 (50%)
Query: 639 GD--YIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW 696
GD Y+ SG+DD IW+ Q ++ L G V+C HP ++ T D T++IW
Sbjct: 197 GDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIW 256
Query: 697 TPS 699
S
Sbjct: 257 HSS 259
Score = 94 (38.1 bits), Expect = 8.9e-06, Sum P(2) = 8.9e-06
Identities = 40/197 (20%), Positives = 88/197 (44%)
Query: 39 RLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFC 98
RL +R+L V ++ + +++ + + VW++ ++ L+ + E V
Sbjct: 4 RLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVC-DLPVRA 62
Query: 99 TKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVG 158
KFV + VV+GA D ++R+FN N + +++ H+ ++ +AV
Sbjct: 63 AKFVARKN--WVVTGADDMQIRVFNY----------NTLERVHMFEAHSDYIRCIAVHPT 110
Query: 159 NPHVVWSASEDGTLRQHDFRQGSSCPPAGSSHQE-CRNILLDLRCGAKRSLADPPKQTLS 217
P ++ S S+D ++ D+ + SC H I+++ + + + A + +
Sbjct: 111 QPFILTS-SDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDR---T 166
Query: 218 LKSCDISSTRPHLLLVG 234
+K + S+ P+ L G
Sbjct: 167 IKVWQLGSSSPNFTLEG 183
Score = 46 (21.3 bits), Expect = 2.6e-06, Sum P(3) = 2.6e-06
Identities = 8/35 (22%), Positives = 19/35 (54%)
Query: 269 PMHLSEHGRSSLHLTHVTFSPNGEEVLLSYSGEHV 303
P+ + + G ++ + +PNG V++ GE++
Sbjct: 342 PLAVKDMGSCEIYPQTIQHNPNGRFVVVCGDGEYI 376
Score = 42 (19.8 bits), Expect = 2.6e-06, Sum P(3) = 2.6e-06
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 416 KRKWKNDAQMAIRDC 430
++KWK A++AI C
Sbjct: 667 EQKWKQLAELAISKC 681
Score = 39 (18.8 bits), Expect = 5.2e-06, Sum P(3) = 5.2e-06
Identities = 13/44 (29%), Positives = 24/44 (54%)
Query: 356 VATGLGKCRMLVEIARNSLEEGKH-----PYY--G-IEACNEVL 391
+AT G M+ ++A + +GK+ Y+ G ++AC E+L
Sbjct: 702 LATASGNANMVNKLAEGAERDGKNNVAFMSYFLQGKVDACLELL 745
>UNIPROTKB|P35605 [details] [associations]
symbol:COPB2 "Coatomer subunit beta'" species:9913 "Bos
taurus" [GO:0005515 "protein binding" evidence=IPI] [GO:0006891
"intra-Golgi vesicle-mediated transport" evidence=ISS;TAS]
[GO:0005794 "Golgi apparatus" evidence=ISS] [GO:0000139 "Golgi
membrane" evidence=ISS] [GO:0030126 "COPI vesicle coat"
evidence=ISS;IDA] [GO:0005080 "protein kinase C binding"
evidence=ISS] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=TAS] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0005080 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006891 GO:GO:0030126 GO:GO:0006890 EMBL:X72756 EMBL:BC134537
IPI:IPI00706476 PIR:S35312 RefSeq:NP_776706.2 UniGene:Bt.4801
ProteinModelPortal:P35605 IntAct:P35605 STRING:P35605 PRIDE:P35605
GeneID:281706 KEGG:bta:281706 CTD:9276 HOGENOM:HOG000163444
HOVERGEN:HBG051076 InParanoid:P35605 OrthoDB:EOG43R3KZ
NextBio:20805628 InterPro:IPR016453 PIRSF:PIRSF005567
Uniprot:P35605
Length = 906
Score = 151 (58.2 bits), Expect = 2.6e-06, Sum P(3) = 2.6e-06
Identities = 31/84 (36%), Positives = 51/84 (60%)
Query: 46 LEGHQGCVNAISWNSKGS--LLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP 103
LEGH+ VN I + S G LISG+DD + +W Y ++ + ++E GH+ NV C F P
Sbjct: 181 LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLE-GHAQNVSCASFHP 239
Query: 104 ETSDELVVSGAGDAEVRLFNLSRF 127
E ++++G+ D VR+++ S +
Sbjct: 240 ELP--IIITGSEDGTVRIWHSSTY 261
Score = 98 (39.6 bits), Expect = 8.9e-06, Sum P(2) = 8.9e-06
Identities = 22/63 (34%), Positives = 32/63 (50%)
Query: 639 GD--YIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW 696
GD Y+ SG+DD IW+ Q ++ L G V+C HP ++ T D T++IW
Sbjct: 197 GDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIW 256
Query: 697 TPS 699
S
Sbjct: 257 HSS 259
Score = 94 (38.1 bits), Expect = 8.9e-06, Sum P(2) = 8.9e-06
Identities = 40/197 (20%), Positives = 88/197 (44%)
Query: 39 RLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFC 98
RL +R+L V ++ + +++ + + VW++ ++ L+ + E V
Sbjct: 4 RLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVC-DLPVRA 62
Query: 99 TKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVG 158
KFV + VV+GA D ++R+FN N + +++ H+ ++ +AV
Sbjct: 63 AKFVARKN--WVVTGADDMQIRVFNY----------NTLERVHMFEAHSDYIRCIAVHPT 110
Query: 159 NPHVVWSASEDGTLRQHDFRQGSSCPPAGSSHQE-CRNILLDLRCGAKRSLADPPKQTLS 217
P ++ S S+D ++ D+ + SC H I+++ + + + A + +
Sbjct: 111 QPFILTS-SDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDR---T 166
Query: 218 LKSCDISSTRPHLLLVG 234
+K + S+ P+ L G
Sbjct: 167 IKVWQLGSSSPNFTLEG 183
Score = 46 (21.3 bits), Expect = 2.6e-06, Sum P(3) = 2.6e-06
Identities = 8/35 (22%), Positives = 19/35 (54%)
Query: 269 PMHLSEHGRSSLHLTHVTFSPNGEEVLLSYSGEHV 303
P+ + + G ++ + +PNG V++ GE++
Sbjct: 342 PLAVKDMGSCEIYPQTIQHNPNGRFVVVCGDGEYI 376
Score = 42 (19.8 bits), Expect = 2.6e-06, Sum P(3) = 2.6e-06
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 416 KRKWKNDAQMAIRDC 430
++KWK A++AI C
Sbjct: 667 EQKWKQLAELAISKC 681
Score = 37 (18.1 bits), Expect = 8.2e-06, Sum P(3) = 8.2e-06
Identities = 13/44 (29%), Positives = 24/44 (54%)
Query: 356 VATGLGKCRMLVEIARNSLEEGKH-----PYY--G-IEACNEVL 391
+AT G M+ ++A + +GK+ Y+ G ++AC E+L
Sbjct: 702 LATASGNASMVNKLAEGAERDGKNNVAFMSYFLQGKLDACLELL 745
>UNIPROTKB|E2R667 [details] [associations]
symbol:COPB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0006891
"intra-Golgi vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006891 GO:GO:0030126 InterPro:IPR016453 PIRSF:PIRSF005567
GeneTree:ENSGT00640000091529 OMA:LRNKAFG EMBL:AAEX03013631
ProteinModelPortal:E2R667 Ensembl:ENSCAFT00000012160 Uniprot:E2R667
Length = 906
Score = 151 (58.2 bits), Expect = 2.6e-06, Sum P(3) = 2.6e-06
Identities = 31/84 (36%), Positives = 51/84 (60%)
Query: 46 LEGHQGCVNAISWNSKGS--LLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP 103
LEGH+ VN I + S G LISG+DD + +W Y ++ + ++E GH+ NV C F P
Sbjct: 181 LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLE-GHAQNVSCASFHP 239
Query: 104 ETSDELVVSGAGDAEVRLFNLSRF 127
E ++++G+ D VR+++ S +
Sbjct: 240 ELP--IIITGSEDGTVRIWHSSTY 261
Score = 98 (39.6 bits), Expect = 8.9e-06, Sum P(2) = 8.9e-06
Identities = 22/63 (34%), Positives = 32/63 (50%)
Query: 639 GD--YIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW 696
GD Y+ SG+DD IW+ Q ++ L G V+C HP ++ T D T++IW
Sbjct: 197 GDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIW 256
Query: 697 TPS 699
S
Sbjct: 257 HSS 259
Score = 94 (38.1 bits), Expect = 8.9e-06, Sum P(2) = 8.9e-06
Identities = 40/197 (20%), Positives = 88/197 (44%)
Query: 39 RLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFC 98
RL +R+L V ++ + +++ + + VW++ ++ L+ + E V
Sbjct: 4 RLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVC-DLPVRA 62
Query: 99 TKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVG 158
KFV + VV+GA D ++R+FN N + +++ H+ ++ +AV
Sbjct: 63 AKFVARKN--WVVTGADDMQIRVFNY----------NTLERVHMFEAHSDYIRCIAVHPT 110
Query: 159 NPHVVWSASEDGTLRQHDFRQGSSCPPAGSSHQE-CRNILLDLRCGAKRSLADPPKQTLS 217
P ++ S S+D ++ D+ + SC H I+++ + + + A + +
Sbjct: 111 QPFILTS-SDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDR---T 166
Query: 218 LKSCDISSTRPHLLLVG 234
+K + S+ P+ L G
Sbjct: 167 IKVWQLGSSSPNFTLEG 183
Score = 46 (21.3 bits), Expect = 2.6e-06, Sum P(3) = 2.6e-06
Identities = 8/35 (22%), Positives = 19/35 (54%)
Query: 269 PMHLSEHGRSSLHLTHVTFSPNGEEVLLSYSGEHV 303
P+ + + G ++ + +PNG V++ GE++
Sbjct: 342 PLAVKDMGSCEIYPQTIQHNPNGRFVVVCGDGEYI 376
Score = 42 (19.8 bits), Expect = 2.6e-06, Sum P(3) = 2.6e-06
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 416 KRKWKNDAQMAIRDC 430
++KWK A++AI C
Sbjct: 667 EQKWKQLAELAISKC 681
Score = 37 (18.1 bits), Expect = 8.2e-06, Sum P(3) = 8.2e-06
Identities = 13/44 (29%), Positives = 24/44 (54%)
Query: 356 VATGLGKCRMLVEIARNSLEEGKH-----PYY--G-IEACNEVL 391
+AT G M+ ++A + +GK+ Y+ G ++AC E+L
Sbjct: 702 LATASGNASMVNKLAEGAERDGKNNVAFMSYFLQGKLDACLELL 745
>UNIPROTKB|F1SL54 [details] [associations]
symbol:COPB2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0015629
"actin cytoskeleton" evidence=IEA] [GO:0006891 "intra-Golgi
vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006891 GO:GO:0030126 CTD:9276 InterPro:IPR016453
PIRSF:PIRSF005567 GeneTree:ENSGT00640000091529 OMA:LRNKAFG
EMBL:CU582855 RefSeq:XP_001926139.3 UniGene:Ssc.51974
Ensembl:ENSSSCT00000012767 GeneID:100156939 KEGG:ssc:100156939
Uniprot:F1SL54
Length = 906
Score = 151 (58.2 bits), Expect = 2.6e-06, Sum P(3) = 2.6e-06
Identities = 31/84 (36%), Positives = 51/84 (60%)
Query: 46 LEGHQGCVNAISWNSKGS--LLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP 103
LEGH+ VN I + S G LISG+DD + +W Y ++ + ++E GH+ NV C F P
Sbjct: 181 LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLE-GHAQNVSCASFHP 239
Query: 104 ETSDELVVSGAGDAEVRLFNLSRF 127
E ++++G+ D VR+++ S +
Sbjct: 240 ELP--IIITGSEDGTVRIWHSSTY 261
Score = 98 (39.6 bits), Expect = 8.9e-06, Sum P(2) = 8.9e-06
Identities = 22/63 (34%), Positives = 32/63 (50%)
Query: 639 GD--YIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW 696
GD Y+ SG+DD IW+ Q ++ L G V+C HP ++ T D T++IW
Sbjct: 197 GDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIW 256
Query: 697 TPS 699
S
Sbjct: 257 HSS 259
Score = 94 (38.1 bits), Expect = 8.9e-06, Sum P(2) = 8.9e-06
Identities = 40/197 (20%), Positives = 88/197 (44%)
Query: 39 RLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFC 98
RL +R+L V ++ + +++ + + VW++ ++ L+ + E V
Sbjct: 4 RLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVC-DLPVRA 62
Query: 99 TKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVG 158
KFV + VV+GA D ++R+FN N + +++ H+ ++ +AV
Sbjct: 63 AKFVARKN--WVVTGADDMQIRVFNY----------NTLERVHMFEAHSDYIRCIAVHPT 110
Query: 159 NPHVVWSASEDGTLRQHDFRQGSSCPPAGSSHQE-CRNILLDLRCGAKRSLADPPKQTLS 217
P ++ S S+D ++ D+ + SC H I+++ + + + A + +
Sbjct: 111 QPFILTS-SDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDR---T 166
Query: 218 LKSCDISSTRPHLLLVG 234
+K + S+ P+ L G
Sbjct: 167 IKVWQLGSSSPNFTLEG 183
Score = 46 (21.3 bits), Expect = 2.6e-06, Sum P(3) = 2.6e-06
Identities = 8/35 (22%), Positives = 19/35 (54%)
Query: 269 PMHLSEHGRSSLHLTHVTFSPNGEEVLLSYSGEHV 303
P+ + + G ++ + +PNG V++ GE++
Sbjct: 342 PLAVKDMGSCEIYPQTIQHNPNGRFVVVCGDGEYI 376
Score = 42 (19.8 bits), Expect = 2.6e-06, Sum P(3) = 2.6e-06
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 416 KRKWKNDAQMAIRDC 430
++KWK A++AI C
Sbjct: 667 EQKWKQLAELAISKC 681
Score = 37 (18.1 bits), Expect = 8.2e-06, Sum P(3) = 8.2e-06
Identities = 13/44 (29%), Positives = 24/44 (54%)
Query: 356 VATGLGKCRMLVEIARNSLEEGKH-----PYY--G-IEACNEVL 391
+AT G M+ ++A + +GK+ Y+ G ++AC E+L
Sbjct: 702 LATASGNASMVNKLAEGAERDGKNNVAFMSYFLQGKLDACLELL 745
>DICTYBASE|DDB_G0267982 [details] [associations]
symbol:copA "coatomer protein complex alpha subunit"
species:44689 "Dictyostelium discoideum" [GO:0030126 "COPI vesicle
coat" evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000139
"Golgi membrane" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0267982 GO:GO:0006886
GenomeReviews:CM000150_GR GO:GO:0016192 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:AAFI02000003
GO:GO:0030126 HSSP:P63005 KO:K05236 InterPro:IPR016391
PIRSF:PIRSF003354 RefSeq:XP_647464.1 ProteinModelPortal:Q55FR9
STRING:Q55FR9 EnsemblProtists:DDB0233797 GeneID:8616271
KEGG:ddi:DDB_G0267982 OMA:FWVLGAH ProtClustDB:CLSZ2846951
Uniprot:Q55FR9
Length = 1221
Score = 120 (47.3 bits), Expect = 2.6e-06, Sum P(3) = 2.6e-06
Identities = 24/80 (30%), Positives = 48/80 (60%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L+GH+ + ++ ++ + ++S SDD I +W++ SR + + GH+ V F P+
Sbjct: 89 LKGHKDYIRSVEFHREAPWIVSSSDDMVIRIWNWQSRTCIAELN-GHNHYVMSALFHPK- 146
Query: 106 SDELVVSGAGDAEVRLFNLS 125
D+LVVS + D +R++++S
Sbjct: 147 -DDLVVSASLDQTIRIWDIS 165
Score = 114 (45.2 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 28/96 (29%), Positives = 49/96 (51%)
Query: 28 HSLQMHSSLVRRLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHS 87
HS +H R + + + H+G V I+++ L +SG DD I VW+Y R+ L +
Sbjct: 29 HSGSIHLYDYRIKTLLEKFDEHEGPVRGINFHMTQPLFVSGGDDYKIKVWNYKQRRCLFT 88
Query: 88 IETGHSANVFCTKFVPETSDELVVSGAGDAEVRLFN 123
++ GH + +F E +VS + D +R++N
Sbjct: 89 LK-GHKDYIRSVEFHREAP--WIVSSSDDMVIRIWN 121
Score = 85 (35.0 bits), Expect = 2.6e-06, Sum P(3) = 2.6e-06
Identities = 27/99 (27%), Positives = 45/99 (45%)
Query: 601 QNDRIPYQPE---TVIDMKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQ 657
+ND + Q E T I ++ GH + ASF + YI S SDD + +W +
Sbjct: 179 ENDPMRLQDELFGTDISVRLSLEGH---DRGVNWASFHPTQ-PYIVSASDDHQVKLW-RM 233
Query: 658 TGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW 696
++ G V+C HP ++ ++ D TI++W
Sbjct: 234 NDPIVDTFRGHYNNVSCALFHPRQDLIISNSEDKTIRVW 272
Score = 40 (19.1 bits), Expect = 2.6e-06, Sum P(3) = 2.6e-06
Identities = 14/60 (23%), Positives = 29/60 (48%)
Query: 694 KIWTPSASVPSIVSGGAAGPDTADVLEAMESNQRKLSRNREHSLSYELLERFHMHEFSEG 753
+ WT AS P+ + AAG D+ ++ +E + +N + + + + F+ +F G
Sbjct: 289 RFWT-LASHPN-QNLFAAGHDSGMIVFKLERERPLFVQNGDSGVFFLKKKNFNSFDFQAG 346
>TAIR|locus:2158232 [details] [associations]
symbol:HOS15 "high expression of osmotically responsive
genes 15" species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISS] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0009409 "response to cold" evidence=IMP]
[GO:0016575 "histone deacetylation" evidence=IMP] [GO:0000956
"nuclear-transcribed mRNA catabolic process" evidence=RCA]
[GO:0006342 "chromatin silencing" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0010388 "cullin
deneddylation" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0016571 "histone methylation" evidence=RCA]
[GO:0016572 "histone phosphorylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0051567 "histone H3-K9 methylation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005634
EMBL:CP002688 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0009409 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 EMBL:AB007645 GO:GO:0016575
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000220902 OMA:LANNHAD
EMBL:AY057698 EMBL:AY143932 IPI:IPI00531489 RefSeq:NP_201533.1
UniGene:At.6493 ProteinModelPortal:Q9FN19 SMR:Q9FN19 STRING:Q9FN19
PRIDE:Q9FN19 EnsemblPlants:AT5G67320.1 GeneID:836867
KEGG:ath:AT5G67320 TAIR:At5g67320 InParanoid:Q9FN19
PhylomeDB:Q9FN19 ProtClustDB:CLSN2687044 Genevestigator:Q9FN19
Uniprot:Q9FN19
Length = 613
Score = 125 (49.1 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 32/129 (24%), Positives = 62/129 (48%)
Query: 2 ENFPFHDGSIYDMLDTRHTDTRPDVNHSLQMHSSLVRRLSQERELEGHQGCVNAISWNSK 61
+ F FH G D+ D R+ + + ++ + + GHQG VN + W+
Sbjct: 401 QQFEFHSGPTLDV-DWRNNVSFATSSTDSMIYLCKIGETRPAKTFTGHQGEVNCVKWDPT 459
Query: 62 GSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPE---TSD---ELVVSGAG 115
GSLL S SDD+ +W+ +H + H+ ++ ++ P T++ +L ++ A
Sbjct: 460 GSLLASCSDDSTAKIWNIKQSTFVHDLRE-HTKEIYTIRWSPTGPGTNNPNKQLTLASAS 518
Query: 116 -DAEVRLFN 123
D+ V+L++
Sbjct: 519 FDSTVKLWD 527
Score = 98 (39.6 bits), Expect = 0.00049, Sum P(2) = 0.00049
Identities = 24/68 (35%), Positives = 31/68 (45%)
Query: 41 SQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTK 100
S R LEGH V A +W+ SLL SGS D +WS ++ TG + N K
Sbjct: 256 SDVRILEGHTSEVCACAWSPSASLLASGSGDATARIWSIPEGSF-KAVHTGRNINALILK 314
Query: 101 FVPETSDE 108
S+E
Sbjct: 315 HAKGKSNE 322
Score = 73 (30.8 bits), Expect = 0.00049, Sum P(2) = 0.00049
Identities = 17/54 (31%), Positives = 27/54 (50%)
Query: 643 ASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW 696
A+ S D ++ + R K G + VNCV+ P ++A+ D+T KIW
Sbjct: 422 ATSSTDSMIYLCKIGETRPAKTFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIW 475
Score = 67 (28.6 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAV 671
G+YIASGS D IW + G+++K G+ +
Sbjct: 553 GEYIASGSLDKSIHIWSIKEGKIVKTYTGNGGI 585
Score = 64 (27.6 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
Identities = 14/56 (25%), Positives = 27/56 (48%)
Query: 642 IASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIWT 697
+AS S D +W+ + G+++ G V + P +A+ +D +I IW+
Sbjct: 514 LASASFDSTVKLWDAELGKMLCSFNGHREPVYSLAFSPNGEYIASGSLDKSIHIWS 569
>UNIPROTKB|E1C016 [details] [associations]
symbol:COPB2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=IEA]
[GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0030126 "COPI
vesicle coat" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005198 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006891 GO:GO:0030126
CTD:9276 InterPro:IPR016453 PIRSF:PIRSF005567
GeneTree:ENSGT00640000091529 OMA:LRNKAFG EMBL:AADN02024196
IPI:IPI00598430 RefSeq:XP_422637.2 ProteinModelPortal:E1C016
Ensembl:ENSGALT00000008592 GeneID:424823 KEGG:gga:424823
NextBio:20827098 Uniprot:E1C016
Length = 913
Score = 151 (58.2 bits), Expect = 2.7e-06, Sum P(3) = 2.7e-06
Identities = 31/84 (36%), Positives = 51/84 (60%)
Query: 46 LEGHQGCVNAISWNSKGS--LLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP 103
LEGH+ VN I + S G LISG+DD + +W Y ++ + ++E GH+ NV C F P
Sbjct: 181 LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLE-GHAQNVSCVSFHP 239
Query: 104 ETSDELVVSGAGDAEVRLFNLSRF 127
E ++++G+ D VR+++ S +
Sbjct: 240 ELP--IIITGSEDGTVRIWHSSTY 261
Score = 102 (41.0 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 23/63 (36%), Positives = 33/63 (52%)
Query: 639 GD--YIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW 696
GD Y+ SG+DD IW+ Q ++ L G V+CV HP ++ T D T++IW
Sbjct: 197 GDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCVSFHPELPIIITGSEDGTVRIW 256
Query: 697 TPS 699
S
Sbjct: 257 HSS 259
Score = 94 (38.1 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 40/197 (20%), Positives = 88/197 (44%)
Query: 39 RLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFC 98
RL +R+L V ++ + +++ + + VW++ ++ L+ + E V
Sbjct: 4 RLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVC-DLPVRA 62
Query: 99 TKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVG 158
KFV + VV+GA D ++R+FN N + +++ H+ ++ +AV
Sbjct: 63 AKFVARKN--WVVTGADDMQIRVFNY----------NTLERVHMFEAHSDYIRCIAVHPT 110
Query: 159 NPHVVWSASEDGTLRQHDFRQGSSCPPAGSSHQE-CRNILLDLRCGAKRSLADPPKQTLS 217
P ++ S S+D ++ D+ + SC H I+++ + + + A + +
Sbjct: 111 QPFILTS-SDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDR---T 166
Query: 218 LKSCDISSTRPHLLLVG 234
+K + S+ P+ L G
Sbjct: 167 IKVWQLGSSSPNFTLEG 183
Score = 46 (21.3 bits), Expect = 2.7e-06, Sum P(3) = 2.7e-06
Identities = 8/35 (22%), Positives = 19/35 (54%)
Query: 269 PMHLSEHGRSSLHLTHVTFSPNGEEVLLSYSGEHV 303
P+ + + G ++ + +PNG V++ GE++
Sbjct: 342 PLAVKDMGSCEIYPQTIQHNPNGRFVVVCGDGEYI 376
Score = 42 (19.8 bits), Expect = 2.7e-06, Sum P(3) = 2.7e-06
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 416 KRKWKNDAQMAIRDC 430
++KWK A++AI C
Sbjct: 667 EQKWKQLAELAISKC 681
Score = 37 (18.1 bits), Expect = 8.5e-06, Sum P(3) = 8.5e-06
Identities = 7/24 (29%), Positives = 15/24 (62%)
Query: 356 VATGLGKCRMLVEIARNSLEEGKH 379
+AT G M+ ++A + ++GK+
Sbjct: 702 LATASGNANMVNKLAEGAEKDGKN 725
>SGD|S000000653 [details] [associations]
symbol:PWP2 "Conserved 90S pre-ribosomal component"
species:4932 "Saccharomyces cerevisiae" [GO:0005730 "nucleolus"
evidence=IEA;IDA] [GO:0000462 "maturation of SSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000480 "endonucleolytic cleavage in 5'-ETS of
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000472 "endonucleolytic cleavage to generate
mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IDA] [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0030010 "establishment of cell polarity"
evidence=IMP] [GO:0034388 "Pwp2p-containing subcomplex of 90S
preribosome" evidence=IDA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0030515
"snoRNA binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000000653 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:X59720 EMBL:BK006937 GO:GO:0000910
InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0030010 GO:GO:0032040
GO:GO:0000447 GO:GO:0000472 GO:GO:0000480
GeneTree:ENSGT00550000074981 HOGENOM:HOG000160363 KO:K14558
OMA:VWQCDTP InterPro:IPR027145 InterPro:IPR007148 PANTHER:PTHR19858
Pfam:PF04003 OrthoDB:EOG4350F7 EMBL:X78964 PIR:S44226
RefSeq:NP_009984.1 ProteinModelPortal:P25635 SMR:P25635
DIP:DIP-1868N IntAct:P25635 MINT:MINT-392472 STRING:P25635
PaxDb:P25635 PeptideAtlas:P25635 EnsemblFungi:YCR057C GeneID:850422
KEGG:sce:YCR057C CYGD:YCR057c NextBio:965992 Genevestigator:P25635
GermOnline:YCR057C GO:GO:0034388 Uniprot:P25635
Length = 923
Score = 102 (41.0 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 21/60 (35%), Positives = 36/60 (60%)
Query: 639 GDYIASGS-DDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIWT 697
G+ + +GS D+ +W QTG+L+ L G E V+C+ + V+A++ D TI+IW+
Sbjct: 442 GEVVCAGSLDNFDIHVWSVQTGQLLDALSGHEGPVSCLSFSQENSVLASASWDKTIRIWS 501
Score = 95 (38.5 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 22/81 (27%), Positives = 45/81 (55%)
Query: 47 EGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPETS 106
+GH N+++++ GS +++ S+D I VW +S L + E H+++V +F
Sbjct: 342 QGHFDSTNSLAYSPDGSRVVTASEDGKIKVWDITSGFCLATFEE-HTSSVTAVQFAKR-- 398
Query: 107 DELVVSGAGDAEVRLFNLSRF 127
+++ S + D VR ++L R+
Sbjct: 399 GQVMFSSSLDGTVRAWDLIRY 419
Score = 75 (31.5 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 36/135 (26%), Positives = 64/135 (47%)
Query: 44 RELEGHQGCVNAISWNSKGSLLISGSDDT-HINVWSYSSRKLLHSIETGHSANVFCTKFV 102
++L Q VN +S N G L GS + V+ + S + + GH + +
Sbjct: 296 QQLSMGQNPVNTVSVNQTGEWLAFGSSKLGQLLVYEWQSESYILK-QQGHFDSTNSLAYS 354
Query: 103 PETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNP-H 161
P+ S VV+ + D ++++++++ SG L A ++ HT V AV+
Sbjct: 355 PDGSR--VVTASEDGKIKVWDIT--SGFCL--------ATFEEHTSSVT--AVQFAKRGQ 400
Query: 162 VVWSASEDGTLRQHD 176
V++S+S DGT+R D
Sbjct: 401 VMFSSSLDGTVRAWD 415
>UNIPROTKB|F1S8S6 [details] [associations]
symbol:WDR26 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
GeneTree:ENSGT00530000063585 PROSITE:PS50897 InterPro:IPR006595
SMART:SM00668 OMA:IRGQFYQ CTD:80232 EMBL:CU927957
RefSeq:XP_003357688.1 UniGene:Ssc.21945 Ensembl:ENSSSCT00000011871
GeneID:100523327 KEGG:ssc:100523327 Uniprot:F1S8S6
Length = 660
Score = 127 (49.8 bits), Expect = 2.8e-06, Sum P(3) = 2.8e-06
Identities = 26/67 (38%), Positives = 40/67 (59%)
Query: 634 FLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHP-FDCVVATSGIDNT 692
F G D+IASGS+D + +IW K++ I L G VNCV +P ++A++ D T
Sbjct: 577 FGGHNEDFIASGSEDHKVYIWHKRSELPIAELTGHTRTVNCVSWNPQIPSMMASASDDGT 636
Query: 693 IKIWTPS 699
++IW P+
Sbjct: 637 VRIWGPA 643
Score = 68 (29.0 bits), Expect = 2.8e-06, Sum P(3) = 2.8e-06
Identities = 22/72 (30%), Positives = 39/72 (54%)
Query: 58 WNSKGSLLISGSDDTHINVWSYSSR----KLLHSIETGHSANVFCTKFVPETSDELVVSG 113
+++ G+ L +GS DT + +W KLL ++E GH+ V + P+ + LV G
Sbjct: 362 FSNDGTKLATGSKDTTVIIWQVDPDTHLLKLLKTLE-GHAYGVSYIAWSPD-DNYLVACG 419
Query: 114 AGD-AEVRLFNL 124
D +E+ L+N+
Sbjct: 420 PDDCSELWLWNV 431
Score = 63 (27.2 bits), Expect = 8.7e-06, Sum P(3) = 8.7e-06
Identities = 15/63 (23%), Positives = 33/63 (52%)
Query: 44 RELEGHQGCVNAISWNSKGSLLIS-GSDD-THINVWSYSSRKLLHSIETGHSANVFCTKF 101
+ LEGH V+ I+W+ + L++ G DD + + +W+ + +L + H ++ +
Sbjct: 394 KTLEGHAYGVSYIAWSPDDNYLVACGPDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAW 453
Query: 102 VPE 104
P+
Sbjct: 454 NPD 456
Score = 45 (20.9 bits), Expect = 0.00052, Sum P(3) = 0.00052
Identities = 5/22 (22%), Positives = 13/22 (59%)
Query: 47 EGHQGCVNAISWNSKGSLLISG 68
+ H+ + +++WN G ++G
Sbjct: 442 QSHEDSLTSVAWNPDGKRFVTG 463
Score = 40 (19.1 bits), Expect = 2.8e-06, Sum P(3) = 2.8e-06
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 286 TFSPNGEEVLLSYSGEHVYLMDV 308
T S NG LL+ + + V+L D+
Sbjct: 532 TISKNGRLALLNVATQGVHLWDL 554
>UNIPROTKB|Q9H7D7 [details] [associations]
symbol:WDR26 "WD repeat-containing protein 26" species:9606
"Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005634
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
eggNOG:COG2319 PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
HOVERGEN:HBG083958 OMA:IRGQFYQ OrthoDB:EOG4GHZNV EMBL:AB209887
EMBL:AC099790 EMBL:BC031471 EMBL:BC034498 EMBL:BC052301
EMBL:BC063817 EMBL:AY221751 EMBL:AY304473 EMBL:AF130049
EMBL:EF011612 EMBL:AK024669 IPI:IPI00414197 IPI:IPI00645819
IPI:IPI00646469 IPI:IPI00829602 RefSeq:NP_001108585.2
RefSeq:NP_079436.4 UniGene:Hs.497873 UniGene:Hs.729289
ProteinModelPortal:Q9H7D7 SMR:Q9H7D7 IntAct:Q9H7D7 STRING:Q9H7D7
PhosphoSite:Q9H7D7 DMDM:134047967 PaxDb:Q9H7D7 PRIDE:Q9H7D7
Ensembl:ENST00000295024 Ensembl:ENST00000366852
Ensembl:ENST00000414423 GeneID:80232 KEGG:hsa:80232 UCSC:uc001hop.4
UCSC:uc001hoq.4 UCSC:uc021pjt.1 CTD:80232 GeneCards:GC01M224573
HGNC:HGNC:21208 HPA:HPA028539 neXtProt:NX_Q9H7D7
PharmGKB:PA134907873 InParanoid:Q9H7D7 ChiTaRS:WDR26
GenomeRNAi:80232 NextBio:70673 ArrayExpress:Q9H7D7 Bgee:Q9H7D7
CleanEx:HS_WDR26 Genevestigator:Q9H7D7 GermOnline:ENSG00000162923
Uniprot:Q9H7D7
Length = 661
Score = 127 (49.8 bits), Expect = 2.8e-06, Sum P(3) = 2.8e-06
Identities = 26/67 (38%), Positives = 40/67 (59%)
Query: 634 FLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHP-FDCVVATSGIDNT 692
F G D+IASGS+D + +IW K++ I L G VNCV +P ++A++ D T
Sbjct: 578 FGGHNEDFIASGSEDHKVYIWHKRSELPIAELTGHTRTVNCVSWNPQIPSMMASASDDGT 637
Query: 693 IKIWTPS 699
++IW P+
Sbjct: 638 VRIWGPA 644
Score = 68 (29.0 bits), Expect = 2.8e-06, Sum P(3) = 2.8e-06
Identities = 22/72 (30%), Positives = 39/72 (54%)
Query: 58 WNSKGSLLISGSDDTHINVWSYSSR----KLLHSIETGHSANVFCTKFVPETSDELVVSG 113
+++ G+ L +GS DT + +W KLL ++E GH+ V + P+ + LV G
Sbjct: 363 FSNDGTKLATGSKDTTVIIWQVDPDTHLLKLLKTLE-GHAYGVSYIAWSPD-DNYLVACG 420
Query: 114 AGD-AEVRLFNL 124
D +E+ L+N+
Sbjct: 421 PDDCSELWLWNV 432
Score = 63 (27.2 bits), Expect = 8.8e-06, Sum P(3) = 8.8e-06
Identities = 15/63 (23%), Positives = 33/63 (52%)
Query: 44 RELEGHQGCVNAISWNSKGSLLIS-GSDD-THINVWSYSSRKLLHSIETGHSANVFCTKF 101
+ LEGH V+ I+W+ + L++ G DD + + +W+ + +L + H ++ +
Sbjct: 395 KTLEGHAYGVSYIAWSPDDNYLVACGPDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAW 454
Query: 102 VPE 104
P+
Sbjct: 455 NPD 457
Score = 45 (20.9 bits), Expect = 0.00052, Sum P(3) = 0.00052
Identities = 5/22 (22%), Positives = 13/22 (59%)
Query: 47 EGHQGCVNAISWNSKGSLLISG 68
+ H+ + +++WN G ++G
Sbjct: 443 QSHEDSLTSVAWNPDGKRFVTG 464
Score = 40 (19.1 bits), Expect = 2.8e-06, Sum P(3) = 2.8e-06
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 286 TFSPNGEEVLLSYSGEHVYLMDV 308
T S NG LL+ + + V+L D+
Sbjct: 533 TISKNGRLALLNVATQGVHLWDL 555
>UNIPROTKB|F1MNN4 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000060 "positive regulation of protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:DAAA02044177 IPI:IPI00716528 UniGene:Bt.24006
ProteinModelPortal:F1MNN4 Ensembl:ENSBTAT00000010457 Uniprot:F1MNN4
Length = 627
Score = 105 (42.0 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 27/83 (32%), Positives = 49/83 (59%)
Query: 44 RELEGHQGCVNAISWNS--KGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKF 101
R L GH G V W+S + +++ISGS D + VW+ + + +H++ GH++ V C
Sbjct: 335 RTLVGHTGGV----WSSQMRDNIIISGSTDRTLKVWNAETGECIHTLY-GHTSTVRCMHL 389
Query: 102 VPETSDELVVSGAGDAEVRLFNL 124
++ VVSG+ DA +R++++
Sbjct: 390 ----HEKRVVSGSRDATLRVWDI 408
Score = 98 (39.6 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 24/84 (28%), Positives = 45/84 (53%)
Query: 40 LSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCT 99
L + L+GH V G+ ++SGSDD + VWS + K L ++ GH+ V+ +
Sbjct: 290 LKSPKVLKGHDDHV-ITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTL-VGHTGGVWSS 347
Query: 100 KFVPETSDELVVSGAGDAEVRLFN 123
+ D +++SG+ D ++++N
Sbjct: 348 QM----RDNIIISGSTDRTLKVWN 367
Score = 95 (38.5 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 21/58 (36%), Positives = 32/58 (55%)
Query: 642 IASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGI-DNTIKIWTP 698
+ SGS D +W+ +TG+ + +L+G A V CVQ +D SG D +K+W P
Sbjct: 394 VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQ---YDGRRVVSGAYDFMVKVWDP 448
Score = 90 (36.7 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 23/80 (28%), Positives = 44/80 (55%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L GH V + ++ G ++SG+ D + VW + LH+++ GH+ V+ +F
Sbjct: 417 LMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETETCLHTLQ-GHTNRVYSLQF---- 469
Query: 106 SDEL-VVSGAGDAEVRLFNL 124
D + VVSG+ D +R++++
Sbjct: 470 -DGIHVVSGSLDTSIRVWDV 488
Score = 87 (35.7 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 24/81 (29%), Positives = 41/81 (50%)
Query: 638 RGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDC-VVATSGIDNTIKIW 696
+ + + SG+ D IW+ +TG+ ++ L G + V C F+ V TS D T+K+W
Sbjct: 510 KDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLW 569
Query: 697 TPSAS--VPSIV---SGGAAG 712
+ ++V SGG+ G
Sbjct: 570 DLKTGEFIRNLVTLESGGSGG 590
Score = 86 (35.3 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 25/78 (32%), Positives = 39/78 (50%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L GH V + + K ++SGS D + VW + + LH + GH A V C ++
Sbjct: 377 LYGHTSTVRCMHLHEKR--VVSGSRDATLRVWDIETGQCLHVL-MGHVAAVRCVQY---- 429
Query: 106 SDELVVSGAGDAEVRLFN 123
VVSGA D V++++
Sbjct: 430 DGRRVVSGAYDFMVKVWD 447
Score = 85 (35.0 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 17/58 (29%), Positives = 33/58 (56%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW 696
G ++ SGS D +W+ +TG I L G +++ + ++ D ++ + D+T+KIW
Sbjct: 471 GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK--DNILVSGNADSTVKIW 526
>MGI|MGI:1354695 [details] [associations]
symbol:Fbxw7 "F-box and WD-40 domain protein 7"
species:10090 "Mus musculus" [GO:0001570 "vasculogenesis"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS]
[GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0007062 "sister chromatid cohesion"
evidence=ISO] [GO:0007219 "Notch signaling pathway" evidence=IDA]
[GO:0016567 "protein ubiquitination" evidence=ISO;ISA] [GO:0019005
"SCF ubiquitin ligase complex" evidence=ISO] [GO:0030324 "lung
development" evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0032876 "negative regulation of DNA endoreduplication"
evidence=ISO] [GO:0034644 "cellular response to UV" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0050821 "protein stabilization" evidence=ISO]
[GO:0070374 "positive regulation of ERK1 and ERK2 cascade"
evidence=ISO] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=ISO] Reactome:REACT_93132 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 MGI:MGI:1354695 GO:GO:0005783
GO:GO:0005634 GO:GO:0005794 GO:GO:0048471 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030324
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0001570
GO:GO:0019005 GO:GO:0031146 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 HOVERGEN:HBG051596 OMA:EECLHTL EMBL:AF391202
EMBL:AF391193 EMBL:AF391194 EMBL:AF391195 EMBL:AF391196
EMBL:AF391197 EMBL:AF391198 EMBL:AF391199 EMBL:AF391200
EMBL:AF391201 EMBL:AF391192 EMBL:AF427101 EMBL:BC131648
EMBL:AK032174 IPI:IPI00162935 RefSeq:NP_536353.2 UniGene:Mm.196475
ProteinModelPortal:Q8VBV4 SMR:Q8VBV4 STRING:Q8VBV4 PRIDE:Q8VBV4
Ensembl:ENSMUST00000029727 GeneID:50754 KEGG:mmu:50754
UCSC:uc008pql.2 HOGENOM:HOG000236264 NextBio:307631 Bgee:Q8VBV4
Genevestigator:Q8VBV4 GermOnline:ENSMUSG00000028086 Uniprot:Q8VBV4
Length = 629
Score = 105 (42.0 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 27/83 (32%), Positives = 49/83 (59%)
Query: 44 RELEGHQGCVNAISWNS--KGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKF 101
R L GH G V W+S + +++ISGS D + VW+ + + +H++ GH++ V C
Sbjct: 337 RTLVGHTGGV----WSSQMRDNIIISGSTDRTLKVWNAETGECIHTLY-GHTSTVRCMHL 391
Query: 102 VPETSDELVVSGAGDAEVRLFNL 124
++ VVSG+ DA +R++++
Sbjct: 392 ----HEKRVVSGSRDATLRVWDI 410
Score = 98 (39.6 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 24/84 (28%), Positives = 45/84 (53%)
Query: 40 LSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCT 99
L + L+GH V G+ ++SGSDD + VWS + K L ++ GH+ V+ +
Sbjct: 292 LKSPKVLKGHDDHV-ITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTL-VGHTGGVWSS 349
Query: 100 KFVPETSDELVVSGAGDAEVRLFN 123
+ D +++SG+ D ++++N
Sbjct: 350 QM----RDNIIISGSTDRTLKVWN 369
Score = 95 (38.5 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 21/58 (36%), Positives = 32/58 (55%)
Query: 642 IASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGI-DNTIKIWTP 698
+ SGS D +W+ +TG+ + +L+G A V CVQ +D SG D +K+W P
Sbjct: 396 VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQ---YDGRRVVSGAYDFMVKVWDP 450
Score = 90 (36.7 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 23/80 (28%), Positives = 44/80 (55%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L GH V + ++ G ++SG+ D + VW + LH+++ GH+ V+ +F
Sbjct: 419 LMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETETCLHTLQ-GHTNRVYSLQF---- 471
Query: 106 SDEL-VVSGAGDAEVRLFNL 124
D + VVSG+ D +R++++
Sbjct: 472 -DGIHVVSGSLDTSIRVWDV 490
Score = 87 (35.7 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 24/81 (29%), Positives = 41/81 (50%)
Query: 638 RGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDC-VVATSGIDNTIKIW 696
+ + + SG+ D IW+ +TG+ ++ L G + V C F+ V TS D T+K+W
Sbjct: 512 KDNILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKNFVITSSDDGTVKLW 571
Query: 697 TPSAS--VPSIV---SGGAAG 712
+ ++V SGG+ G
Sbjct: 572 DLKTGEFIRNLVTLESGGSGG 592
Score = 86 (35.3 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 25/78 (32%), Positives = 39/78 (50%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L GH V + + K ++SGS D + VW + + LH + GH A V C ++
Sbjct: 379 LYGHTSTVRCMHLHEKR--VVSGSRDATLRVWDIETGQCLHVL-MGHVAAVRCVQY---- 431
Query: 106 SDELVVSGAGDAEVRLFN 123
VVSGA D V++++
Sbjct: 432 DGRRVVSGAYDFMVKVWD 449
Score = 85 (35.0 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 17/58 (29%), Positives = 33/58 (56%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW 696
G ++ SGS D +W+ +TG I L G +++ + ++ D ++ + D+T+KIW
Sbjct: 473 GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK--DNILVSGNADSTVKIW 528
>UNIPROTKB|E1BGS8 [details] [associations]
symbol:ATG16L1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0000421 "autophagic vacuole membrane" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00700000104505 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000421 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE EMBL:DAAA02009276 IPI:IPI00699437
ProteinModelPortal:E1BGS8 Ensembl:ENSBTAT00000005131 Uniprot:E1BGS8
Length = 623
Score = 117 (46.2 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 31/108 (28%), Positives = 56/108 (51%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L G + +I ++S GS L++ S+D +W+ +L H++ TGHS V KF+ +
Sbjct: 378 LSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTL-TGHSGKVLSAKFLLDN 436
Query: 106 SDELVVSGAGDAEVRLFNL-SR------FSGRGLDDNAITPSALYQCH 146
+ +VSG+ D ++L++L S+ F+G +D T + H
Sbjct: 437 AR--IVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCVMSGH 482
Score = 75 (31.5 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 20/73 (27%), Positives = 36/73 (49%)
Query: 626 GTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAV-VNCVQCHPFDCVV 684
G+D +A F G Y+A+G+ +G +IW +G++ K+L + +N V P V
Sbjct: 550 GSDWTRAVF-SPDGSYVAAGAAEGSLYIWNVLSGKVEKVLSKHHSSSINAVAWSPAGSHV 608
Query: 685 ATSGIDNTIKIWT 697
T + +W+
Sbjct: 609 VTVDKGSKAVLWS 621
>UNIPROTKB|I3LTI2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0001826 "inner cell mass
cell differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 InterPro:IPR011047 SUPFAM:SSF50998
PRINTS:PR00319 GO:GO:0001826 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 EMBL:FP565655
RefSeq:XP_003358201.1 Ensembl:ENSSSCT00000026878 GeneID:100626208
KEGG:ssc:100626208 Uniprot:I3LTI2
Length = 485
Score = 99 (39.9 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 40/136 (29%), Positives = 65/136 (47%)
Query: 47 EGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP-ET 105
+GH+ V +ISW+ G L SG + I +W S+ K + GHS + + P
Sbjct: 153 QGHRHWVLSISWSPDGKKLASGCKNGQILLWDPSTGKQVGRALAGHSKWITALSWEPLHA 212
Query: 106 SDEL--VVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHVV 163
+ E V S + D VR+++ + +GR + +T HT+ V L G ++
Sbjct: 213 NPECRYVASSSKDGSVRVWDTT--AGRC--ERILTG------HTQSVTCL--RWGGDGLL 260
Query: 164 WSASEDGTL---RQHD 176
+SAS+D T+ R HD
Sbjct: 261 YSASQDRTIKVWRAHD 276
Score = 98 (39.6 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 49/199 (24%), Positives = 90/199 (45%)
Query: 4 FPFHDGSIYDML----DTRHTDTRPDVNHSLQMHSSL-VRRLSQ-ERELEGHQGCVNAIS 57
F HD I L +++ +T ++ Q + VR +++ LEGH V +++
Sbjct: 62 FYVHDAEIISSLGKTLESQAVETEKVLDIIYQPQAVFRVRAVTRCTSSLEGHSEAVISVA 121
Query: 58 WNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPETSDELVVSGAGDA 117
++ G L SGS DT + W S+ + H GH V + P+ + + SG +
Sbjct: 122 FSPTGKYLASGSGDTTVRFWDLST-ETPHFTCQGHRHWVLSISWSPD--GKKLASGCKNG 178
Query: 118 EVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEV--GNPHV--VWSASEDGTLR 173
++ L++ S +G+ + A+ H++ + L+ E NP V S+S+DG++R
Sbjct: 179 QILLWDPS--TGKQVG-RALAG------HSKWITALSWEPLHANPECRYVASSSKDGSVR 229
Query: 174 QHDFRQGSSCPPAGSSHQE 192
D G C + H +
Sbjct: 230 VWDTTAGR-CERILTGHTQ 247
Score = 91 (37.1 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 19/61 (31%), Positives = 35/61 (57%)
Query: 638 RG-DYIASGSDDGRWFIWEK-QTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKI 695
RG + + SGSDD F+W + + + + G +A++N V P ++A++ D +IK+
Sbjct: 339 RGLERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIIASASFDKSIKL 398
Query: 696 W 696
W
Sbjct: 399 W 399
Score = 71 (30.1 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 17/59 (28%), Positives = 29/59 (49%)
Query: 642 IASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIWTPSA 700
IAS S D +W+ +TG+ + L G A V + ++ + D+T+K+W A
Sbjct: 387 IASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKA 445
Score = 67 (28.6 bits), Expect = 0.00086, Sum P(2) = 0.00086
Identities = 17/55 (30%), Positives = 25/55 (45%)
Query: 642 IASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW 696
+ SGS D +W+ + +L L G V V P VA+ G D ++IW
Sbjct: 429 LVSGSSDSTLKVWDVKAQKLAADLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 483
>RGD|2321145 [details] [associations]
symbol:Fbxw7 "F-box and WD repeat domain containing 7, E3
ubiquitin protein ligase" species:10116 "Rattus norvegicus"
[GO:0001570 "vasculogenesis" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005654
"nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006974 "response
to DNA damage stimulus" evidence=ISO] [GO:0007062 "sister chromatid
cohesion" evidence=ISO] [GO:0007219 "Notch signaling pathway"
evidence=ISO] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO]
[GO:0030324 "lung development" evidence=ISO] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=ISO] [GO:0034644 "cellular response to
UV" evidence=ISO] [GO:0043234 "protein complex" evidence=ISO]
[GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO] [GO:0050821
"protein stabilization" evidence=ISO] [GO:0070374 "positive
regulation of ERK1 and ERK2 cascade" evidence=ISO] [GO:2000060
"positive regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 RGD:2321145
GO:GO:0005783 GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974
GO:GO:0016567 GO:GO:0019005 GO:GO:0034644 GO:GO:0032876
GO:GO:2000060 GO:GO:0031146 GO:GO:0007062
GeneTree:ENSGT00690000101849 OrthoDB:EOG4MKNFW IPI:IPI00212282
ProteinModelPortal:D3ZQU4 Ensembl:ENSRNOT00000015279
UCSC:RGD:2321145 ArrayExpress:D3ZQU4 Uniprot:D3ZQU4
Length = 588
Score = 105 (42.0 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 27/83 (32%), Positives = 49/83 (59%)
Query: 44 RELEGHQGCVNAISWNS--KGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKF 101
R L GH G V W+S + +++ISGS D + VW+ + + +H++ GH++ V C
Sbjct: 337 RTLVGHTGGV----WSSQMRDNIIISGSTDRTLKVWNAETGECIHTLY-GHTSTVRCMHL 391
Query: 102 VPETSDELVVSGAGDAEVRLFNL 124
++ VVSG+ DA +R++++
Sbjct: 392 ----HEKRVVSGSRDATLRVWDI 410
Score = 97 (39.2 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 24/84 (28%), Positives = 45/84 (53%)
Query: 40 LSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCT 99
L + L+GH V G+ ++SGSDD + VWS + K L ++ GH+ V+ +
Sbjct: 292 LRSPKVLKGHDDHV-ITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTL-VGHTGGVWSS 349
Query: 100 KFVPETSDELVVSGAGDAEVRLFN 123
+ D +++SG+ D ++++N
Sbjct: 350 QM----RDNIIISGSTDRTLKVWN 369
Score = 95 (38.5 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 21/58 (36%), Positives = 32/58 (55%)
Query: 642 IASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGI-DNTIKIWTP 698
+ SGS D +W+ +TG+ + +L+G A V CVQ +D SG D +K+W P
Sbjct: 396 VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQ---YDGRRVVSGAYDFMVKVWDP 450
Score = 90 (36.7 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 23/80 (28%), Positives = 44/80 (55%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L GH V + ++ G ++SG+ D + VW + LH+++ GH+ V+ +F
Sbjct: 419 LMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETETCLHTLQ-GHTNRVYSLQF---- 471
Query: 106 SDEL-VVSGAGDAEVRLFNL 124
D + VVSG+ D +R++++
Sbjct: 472 -DGIHVVSGSLDTSIRVWDV 490
Score = 86 (35.3 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 25/78 (32%), Positives = 39/78 (50%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L GH V + + K ++SGS D + VW + + LH + GH A V C ++
Sbjct: 379 LYGHTSTVRCMHLHEKR--VVSGSRDATLRVWDIETGQCLHVL-MGHVAAVRCVQY---- 431
Query: 106 SDELVVSGAGDAEVRLFN 123
VVSGA D V++++
Sbjct: 432 DGRRVVSGAYDFMVKVWD 449
Score = 85 (35.0 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 17/58 (29%), Positives = 33/58 (56%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW 696
G ++ SGS D +W+ +TG I L G +++ + ++ D ++ + D+T+KIW
Sbjct: 473 GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK--DNILVSGNADSTVKIW 528
Score = 84 (34.6 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
Identities = 19/60 (31%), Positives = 32/60 (53%)
Query: 638 RGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDC-VVATSGIDNTIKIW 696
+ + + SG+ D IW+ +TG+ ++ L G + V C F+ V TS D T+K+W
Sbjct: 512 KDNILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKNFVITSSDDGTVKLW 571
>MGI|MGI:106247 [details] [associations]
symbol:Prpf19 "PRP19/PSO4 pre-mRNA processing factor 19
homolog (S. cerevisiae)" species:10090 "Mus musculus" [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0000245 "spliceosomal complex
assembly" evidence=ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0000974 "Prp19 complex"
evidence=ISO] [GO:0001833 "inner cell mass cell proliferation"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;ISA;IDA] [GO:0005681 "spliceosomal complex"
evidence=ISA;IDA] [GO:0005737 "cytoplasm" evidence=ISO;IDA]
[GO:0005811 "lipid particle" evidence=IDA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0008610 "lipid biosynthetic process"
evidence=IDA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=ISO] [GO:0034450
"ubiquitin-ubiquitin ligase activity" evidence=ISO] [GO:0042802
"identical protein binding" evidence=ISO] [GO:0045665 "negative
regulation of neuron differentiation" evidence=IDA] [GO:0045666
"positive regulation of neuron differentiation" evidence=ISA]
[GO:0048026 "positive regulation of mRNA splicing, via spliceosome"
evidence=IMP] [GO:0048711 "positive regulation of astrocyte
differentiation" evidence=IDA] [GO:0071013 "catalytic step 2
spliceosome" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 SMART:SM00504
MGI:MGI:106247 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775 GO:GO:0005811
GO:GO:0003677 GO:GO:0006281 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045665 GO:GO:0008610 GO:GO:0005681
InterPro:IPR000772 GO:GO:0045666 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000398 GO:GO:0000151
GO:GO:0048711 GO:GO:0001833 GO:GO:0000974 GO:GO:0048026
GeneTree:ENSGT00700000104487 KO:K10599 InterPro:IPR013915
Pfam:PF08606 CTD:27339 HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG
EMBL:AF251503 EMBL:AF386760 EMBL:AK047693 EMBL:AK076998
EMBL:AK088769 EMBL:AK164681 EMBL:BC004070 IPI:IPI00222760
IPI:IPI00480440 IPI:IPI00480507 RefSeq:NP_001240772.1
RefSeq:NP_001240773.1 RefSeq:NP_598890.1 UniGene:Mm.225898
ProteinModelPortal:Q99KP6 SMR:Q99KP6 IntAct:Q99KP6 STRING:Q99KP6
PhosphoSite:Q99KP6 REPRODUCTION-2DPAGE:Q99KP6 PaxDb:Q99KP6
PRIDE:Q99KP6 Ensembl:ENSMUST00000025642 Ensembl:ENSMUST00000178868
GeneID:28000 KEGG:mmu:28000 UCSC:uc008grf.1 InParanoid:Q99KP6
NextBio:306504 Bgee:Q99KP6 Genevestigator:Q99KP6
GermOnline:ENSMUSG00000024735 Uniprot:Q99KP6
Length = 504
Score = 113 (44.8 bits), Expect = 3.8e-06, Sum P(3) = 3.8e-06
Identities = 26/80 (32%), Positives = 39/80 (48%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEA--VVNCVQCHPFDCVVATSGIDNTIKIW 696
GDY+ S SDD W + QTGR++ + + + + C Q HP + T +D+ IKIW
Sbjct: 318 GDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHPDGLIFGTGTMDSQIKIW 377
Query: 697 TPSASVPSIVSGGAAGPDTA 716
G +GP T+
Sbjct: 378 DLKERTNVANFPGHSGPITS 397
Score = 77 (32.2 bits), Expect = 3.8e-06, Sum P(3) = 3.8e-06
Identities = 19/64 (29%), Positives = 38/64 (59%)
Query: 65 LISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPETSDELVVSGAGDAEVRLFNL 124
+++G D ++ V+ S+ ++L +++ GH+ V F P S ELV S + DA +R++++
Sbjct: 237 ILTGGADKNVVVFDKSTEQILATLK-GHTKKVTSVVFHP--SQELVFSASPDATIRIWSV 293
Query: 125 SRFS 128
S
Sbjct: 294 PNTS 297
Score = 61 (26.5 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 13/49 (26%), Positives = 23/49 (46%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSA 94
L+GH V ++ ++ L+ S S D I +WS + + + SA
Sbjct: 260 LKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVPNTSCVQVVRAHESA 308
Score = 40 (19.1 bits), Expect = 3.8e-06, Sum P(3) = 3.8e-06
Identities = 9/25 (36%), Positives = 16/25 (64%)
Query: 22 TRPDVNHSLQMHSSLVR---RLSQE 43
TR +++H+L H + R RL++E
Sbjct: 99 TRQELSHALYQHDAACRVIARLTKE 123
>RGD|708496 [details] [associations]
symbol:Prpf19 "PRP19/PSO4 pre-mRNA processing factor 19 homolog
(S. cerevisiae)" species:10116 "Rattus norvegicus" [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA;ISO] [GO:0000245 "spliceosomal
complex assembly" evidence=IEA;ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO;ISS] [GO:0000974 "Prp19 complex"
evidence=IEA;ISO;ISS] [GO:0001833 "inner cell mass cell
proliferation" evidence=IEA;ISO] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005811 "lipid particle"
evidence=IEA;ISO] [GO:0005819 "spindle" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0008610 "lipid biosynthetic process"
evidence=IEA;ISO] [GO:0016607 "nuclear speck" evidence=IEA;ISO]
[GO:0034450 "ubiquitin-ubiquitin ligase activity" evidence=IEA;ISO]
[GO:0042802 "identical protein binding" evidence=IEA;ISO]
[GO:0045665 "negative regulation of neuron differentiation"
evidence=IEA;ISO] [GO:0048026 "positive regulation of mRNA
splicing, via spliceosome" evidence=IEA;ISO] [GO:0048711 "positive
regulation of astrocyte differentiation" evidence=IEA;ISO]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA;ISO]
[GO:0005681 "spliceosomal complex" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00504 EMBL:AB020022 RGD:708496 GO:GO:0005634
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 GO:GO:0003677 GO:GO:0016607
GO:GO:0006281 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR000772 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0000209 GO:GO:0000398 GO:GO:0071013 GO:GO:0000151
GO:GO:0000245 GO:GO:0034450 GO:GO:0000974 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 CTD:27339
HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG EMBL:BC107669 IPI:IPI00204772
RefSeq:NP_647549.2 UniGene:Rn.19573 ProteinModelPortal:Q9JMJ4
SMR:Q9JMJ4 IntAct:Q9JMJ4 STRING:Q9JMJ4 PhosphoSite:Q9JMJ4
PRIDE:Q9JMJ4 GeneID:246216 KEGG:rno:246216 UCSC:RGD:708496
InParanoid:Q9JMJ4 NextBio:623503 Genevestigator:Q9JMJ4
GermOnline:ENSRNOG00000020897 Uniprot:Q9JMJ4
Length = 504
Score = 113 (44.8 bits), Expect = 3.8e-06, Sum P(3) = 3.8e-06
Identities = 26/80 (32%), Positives = 39/80 (48%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEA--VVNCVQCHPFDCVVATSGIDNTIKIW 696
GDY+ S SDD W + QTGR++ + + + + C Q HP + T +D+ IKIW
Sbjct: 318 GDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHPDGLIFGTGTMDSQIKIW 377
Query: 697 TPSASVPSIVSGGAAGPDTA 716
G +GP T+
Sbjct: 378 DLKERTNVANFPGHSGPITS 397
Score = 77 (32.2 bits), Expect = 3.8e-06, Sum P(3) = 3.8e-06
Identities = 19/64 (29%), Positives = 38/64 (59%)
Query: 65 LISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPETSDELVVSGAGDAEVRLFNL 124
+++G D ++ V+ S+ ++L +++ GH+ V F P S ELV S + DA +R++++
Sbjct: 237 ILTGGADKNVVVFDKSTEQILATLK-GHTKKVTSVVFHP--SQELVFSASPDATIRIWSV 293
Query: 125 SRFS 128
S
Sbjct: 294 PNTS 297
Score = 61 (26.5 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 13/49 (26%), Positives = 23/49 (46%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSA 94
L+GH V ++ ++ L+ S S D I +WS + + + SA
Sbjct: 260 LKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVPNTSCVQVVRAHESA 308
Score = 40 (19.1 bits), Expect = 3.8e-06, Sum P(3) = 3.8e-06
Identities = 9/25 (36%), Positives = 16/25 (64%)
Query: 22 TRPDVNHSLQMHSSLVR---RLSQE 43
TR +++H+L H + R RL++E
Sbjct: 99 TRQELSHALYQHDAACRVIARLTKE 123
>UNIPROTKB|Q9JMJ4 [details] [associations]
symbol:Prpf19 "Pre-mRNA-processing factor 19" species:10116
"Rattus norvegicus" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0000245 "spliceosomal complex assembly"
evidence=IEA] [GO:0001833 "inner cell mass cell proliferation"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0008610 "lipid biosynthetic process" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin
ligase activity" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA] [GO:0048026 "positive regulation of
mRNA splicing, via spliceosome" evidence=IEA] [GO:0048711 "positive
regulation of astrocyte differentiation" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00504 EMBL:AB020022 RGD:708496 GO:GO:0005634
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 GO:GO:0003677 GO:GO:0016607
GO:GO:0006281 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR000772 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0000209 GO:GO:0000398 GO:GO:0071013 GO:GO:0000151
GO:GO:0000245 GO:GO:0034450 GO:GO:0000974 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 CTD:27339
HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG EMBL:BC107669 IPI:IPI00204772
RefSeq:NP_647549.2 UniGene:Rn.19573 ProteinModelPortal:Q9JMJ4
SMR:Q9JMJ4 IntAct:Q9JMJ4 STRING:Q9JMJ4 PhosphoSite:Q9JMJ4
PRIDE:Q9JMJ4 GeneID:246216 KEGG:rno:246216 UCSC:RGD:708496
InParanoid:Q9JMJ4 NextBio:623503 Genevestigator:Q9JMJ4
GermOnline:ENSRNOG00000020897 Uniprot:Q9JMJ4
Length = 504
Score = 113 (44.8 bits), Expect = 3.8e-06, Sum P(3) = 3.8e-06
Identities = 26/80 (32%), Positives = 39/80 (48%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEA--VVNCVQCHPFDCVVATSGIDNTIKIW 696
GDY+ S SDD W + QTGR++ + + + + C Q HP + T +D+ IKIW
Sbjct: 318 GDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHPDGLIFGTGTMDSQIKIW 377
Query: 697 TPSASVPSIVSGGAAGPDTA 716
G +GP T+
Sbjct: 378 DLKERTNVANFPGHSGPITS 397
Score = 77 (32.2 bits), Expect = 3.8e-06, Sum P(3) = 3.8e-06
Identities = 19/64 (29%), Positives = 38/64 (59%)
Query: 65 LISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPETSDELVVSGAGDAEVRLFNL 124
+++G D ++ V+ S+ ++L +++ GH+ V F P S ELV S + DA +R++++
Sbjct: 237 ILTGGADKNVVVFDKSTEQILATLK-GHTKKVTSVVFHP--SQELVFSASPDATIRIWSV 293
Query: 125 SRFS 128
S
Sbjct: 294 PNTS 297
Score = 61 (26.5 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 13/49 (26%), Positives = 23/49 (46%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSA 94
L+GH V ++ ++ L+ S S D I +WS + + + SA
Sbjct: 260 LKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVPNTSCVQVVRAHESA 308
Score = 40 (19.1 bits), Expect = 3.8e-06, Sum P(3) = 3.8e-06
Identities = 9/25 (36%), Positives = 16/25 (64%)
Query: 22 TRPDVNHSLQMHSSLVR---RLSQE 43
TR +++H+L H + R RL++E
Sbjct: 99 TRQELSHALYQHDAACRVIARLTKE 123
>UNIPROTKB|F1NM37 [details] [associations]
symbol:TBL3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006364 "rRNA processing" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 OMA:HHFRGSP GeneTree:ENSGT00690000102183
EMBL:AADN02023671 EMBL:AADN02023670 IPI:IPI00583117
Ensembl:ENSGALT00000008918 Uniprot:F1NM37
Length = 812
Score = 113 (44.8 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 23/81 (28%), Positives = 43/81 (53%)
Query: 48 GHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPETSD 107
GH +N+++ + L+ +GS D +WS LL + TGH ++C +F P D
Sbjct: 488 GHDKDINSVAVSPNDKLIATGSQDRLAKLWSCPDCSLL-GVFTGHKRGIWCVQFSPV--D 544
Query: 108 ELVVSGAGDAEVRLFNLSRFS 128
+++ + + D ++L+ L FS
Sbjct: 545 QILATSSADGTLKLWGLQDFS 565
Score = 101 (40.6 bits), Expect = 7.1e-05, Sum P(2) = 7.1e-05
Identities = 29/89 (32%), Positives = 43/89 (48%)
Query: 609 PETV-IDMKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLG 667
PET+ M +R GH DI + + IA+GS D +W L+ + G
Sbjct: 477 PETLHAQMTER--GH---DKDINSVA-VSPNDKLIATGSQDRLAKLWSCPDCSLLGVFTG 530
Query: 668 DEAVVNCVQCHPFDCVVATSGIDNTIKIW 696
+ + CVQ P D ++ATS D T+K+W
Sbjct: 531 HKRGIWCVQFSPVDQILATSSADGTLKLW 559
Score = 81 (33.6 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 18/59 (30%), Positives = 30/59 (50%)
Query: 638 RGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW 696
RG + SG DG +W +T +K L G E + + + D +V T+ D++I +W
Sbjct: 585 RGTQLLSGGSDGLLKLWTIKTNECVKTLDGHEDKIWGLHTNKQDDMVVTASSDSSITLW 643
Score = 81 (33.6 bits), Expect = 7.1e-05, Sum P(2) = 7.1e-05
Identities = 20/77 (25%), Positives = 41/77 (53%)
Query: 49 HQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPETSDE 108
H V + ++S +LL +G D+ I +W + H+++ G S V +F P+ S
Sbjct: 109 HIAPVATMVFDSTSTLLATGGCDSTIKIWDMIKQYCTHNLK-GSSGVVHLVEFHPDISRL 167
Query: 109 LVVSGAGDAEVRLFNLS 125
+ S + D ++R+++L+
Sbjct: 168 QLFSSSMDYKIRIWDLN 184
>ASPGD|ASPL0000031743 [details] [associations]
symbol:AN8505 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001305 ProteinModelPortal:C8VEM4
EnsemblFungi:CADANIAT00002997 HOGENOM:HOG000234485 OMA:WDAQTGS
Uniprot:C8VEM4
Length = 954
Score = 99 (39.9 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 27/93 (29%), Positives = 44/93 (47%)
Query: 607 YQPETVIDMKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLL 666
+ P T ++Q GH N ++ +F G +ASGS D +W+ TG L + L
Sbjct: 764 WDPATG-SLQQTLRGHSNW---VRSVAF-SPDGRLLASGSFDKTVRLWDPATGSLQQTLR 818
Query: 667 GDEAVVNCVQCHPFDCVVATSGIDNTIKIWTPS 699
G V V P ++A+ D T+++W P+
Sbjct: 819 GHSDTVRSVAFSPDGRLLASGSFDKTVRLWDPA 851
Score = 97 (39.2 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 28/78 (35%), Positives = 41/78 (52%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
LEGH V W ++L SGSDD + +W ++ L ++E GHS V F P+
Sbjct: 699 LEGHSNSV----W----AVLASGSDDETVRLWDPATGSLQQTLE-GHSGWVLSVAFSPD- 748
Query: 106 SDELVVSGAGDAEVRLFN 123
L+ SG+ D VRL++
Sbjct: 749 -GRLLASGSFDKTVRLWD 765
>UNIPROTKB|Q969H0 [details] [associations]
symbol:FBXW7 "F-box/WD repeat-containing protein 7"
species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005654 "nucleoplasm" evidence=IDA;TAS]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0043234 "protein complex" evidence=IDA]
[GO:0006974 "response to DNA damage stimulus" evidence=IDA]
[GO:0034644 "cellular response to UV" evidence=IDA] [GO:0007219
"Notch signaling pathway" evidence=TAS] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IMP] [GO:0007062
"sister chromatid cohesion" evidence=IMP] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=IDA] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0050821 "protein stabilization"
evidence=IDA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IMP] [GO:2000346 "negative regulation of
hepatocyte proliferation" evidence=ISS] [GO:0055088 "lipid
homeostasis" evidence=ISS] [GO:0032880 "regulation of protein
localization" evidence=ISS] [GO:0010883 "regulation of lipid
storage" evidence=ISS] [GO:0010868 "negative regulation of
triglyceride biosynthetic process" evidence=ISS] [GO:0001944
"vasculature development" evidence=TAS] [GO:0045746 "negative
regulation of Notch signaling pathway" evidence=ISS] [GO:2000639
"negative regulation of SREBP signaling pathway" evidence=ISS]
Reactome:REACT_17015 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
GO:GO:0005783 GO:GO:0005794 Reactome:REACT_111102
Reactome:REACT_6900 GO:GO:0019048 GO:GO:0043234 GO:GO:0050821
GO:GO:0005654 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 GO:GO:0032880 SUPFAM:SSF81383
GO:GO:0006974 GO:GO:0016567 GO:GO:0055088 GO:GO:0019005
GO:GO:0034644 GO:GO:0001944 GO:GO:0032876 GO:GO:0010883
GO:GO:2000060 GO:GO:0045746 GO:GO:0031146 GO:GO:0007062 KO:K10260
EMBL:AY033553 EMBL:AF383178 EMBL:AY008274 EMBL:AF411971
EMBL:AF411972 EMBL:AY049984 EMBL:AK001933 EMBL:CR749305
EMBL:BC037320 EMBL:BC117244 EMBL:BC117246 EMBL:BC143944
IPI:IPI00056349 IPI:IPI00059165 IPI:IPI00075075 IPI:IPI00402151
RefSeq:NP_001013433.1 RefSeq:NP_060785.2 RefSeq:NP_361014.1
UniGene:Hs.561245 UniGene:Hs.717081 PDB:2OVP PDB:2OVQ PDB:2OVR
PDBsum:2OVP PDBsum:2OVQ PDBsum:2OVR ProteinModelPortal:Q969H0
SMR:Q969H0 DIP:DIP-27613N IntAct:Q969H0 MINT:MINT-276696
STRING:Q969H0 PhosphoSite:Q969H0 DMDM:44887885 PaxDb:Q969H0
PRIDE:Q969H0 DNASU:55294 Ensembl:ENST00000263981
Ensembl:ENST00000281708 Ensembl:ENST00000296555 GeneID:55294
KEGG:hsa:55294 UCSC:uc003imq.3 UCSC:uc003imr.3 UCSC:uc003ims.3
CTD:55294 GeneCards:GC04M153242 HGNC:HGNC:16712 HPA:CAB013793
HPA:CAB029987 MIM:606278 neXtProt:NX_Q969H0 PharmGKB:PA28054
HOVERGEN:HBG051596 InParanoid:Q969H0 OMA:EECLHTL OrthoDB:EOG4MKNFW
PhylomeDB:Q969H0 EvolutionaryTrace:Q969H0 GenomeRNAi:55294
NextBio:59488 ArrayExpress:Q969H0 Bgee:Q969H0 CleanEx:HS_FBXW7
Genevestigator:Q969H0 GermOnline:ENSG00000109670 GO:GO:2000346
GO:GO:2000639 GO:GO:0010868 Uniprot:Q969H0
Length = 707
Score = 105 (42.0 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 27/83 (32%), Positives = 49/83 (59%)
Query: 44 RELEGHQGCVNAISWNS--KGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKF 101
R L GH G V W+S + +++ISGS D + VW+ + + +H++ GH++ V C
Sbjct: 415 RTLVGHTGGV----WSSQMRDNIIISGSTDRTLKVWNAETGECIHTLY-GHTSTVRCMHL 469
Query: 102 VPETSDELVVSGAGDAEVRLFNL 124
++ VVSG+ DA +R++++
Sbjct: 470 ----HEKRVVSGSRDATLRVWDI 488
Score = 98 (39.6 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 24/84 (28%), Positives = 45/84 (53%)
Query: 40 LSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCT 99
L + L+GH V G+ ++SGSDD + VWS + K L ++ GH+ V+ +
Sbjct: 370 LKSPKVLKGHDDHV-ITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTL-VGHTGGVWSS 427
Query: 100 KFVPETSDELVVSGAGDAEVRLFN 123
+ D +++SG+ D ++++N
Sbjct: 428 QM----RDNIIISGSTDRTLKVWN 447
Score = 95 (38.5 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 21/58 (36%), Positives = 32/58 (55%)
Query: 642 IASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGI-DNTIKIWTP 698
+ SGS D +W+ +TG+ + +L+G A V CVQ +D SG D +K+W P
Sbjct: 474 VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQ---YDGRRVVSGAYDFMVKVWDP 528
Score = 90 (36.7 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 23/80 (28%), Positives = 44/80 (55%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L GH V + ++ G ++SG+ D + VW + LH+++ GH+ V+ +F
Sbjct: 497 LMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETETCLHTLQ-GHTNRVYSLQF---- 549
Query: 106 SDEL-VVSGAGDAEVRLFNL 124
D + VVSG+ D +R++++
Sbjct: 550 -DGIHVVSGSLDTSIRVWDV 568
Score = 87 (35.7 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 24/81 (29%), Positives = 41/81 (50%)
Query: 638 RGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDC-VVATSGIDNTIKIW 696
+ + + SG+ D IW+ +TG+ ++ L G + V C F+ V TS D T+K+W
Sbjct: 590 KDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLW 649
Query: 697 TPSAS--VPSIV---SGGAAG 712
+ ++V SGG+ G
Sbjct: 650 DLKTGEFIRNLVTLESGGSGG 670
Score = 86 (35.3 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 25/78 (32%), Positives = 39/78 (50%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L GH V + + K ++SGS D + VW + + LH + GH A V C ++
Sbjct: 457 LYGHTSTVRCMHLHEKR--VVSGSRDATLRVWDIETGQCLHVL-MGHVAAVRCVQY---- 509
Query: 106 SDELVVSGAGDAEVRLFN 123
VVSGA D V++++
Sbjct: 510 DGRRVVSGAYDFMVKVWD 527
Score = 85 (35.0 bits), Expect = 7.5e-06, Sum P(2) = 7.5e-06
Identities = 17/58 (29%), Positives = 33/58 (56%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW 696
G ++ SGS D +W+ +TG I L G +++ + ++ D ++ + D+T+KIW
Sbjct: 551 GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK--DNILVSGNADSTVKIW 606
>UNIPROTKB|E2QUZ3 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0070374 "positive regulation of ERK1 and
ERK2 cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 OMA:EECLHTL EMBL:AAEX03010045 RefSeq:XP_867701.2
Ensembl:ENSCAFT00000012962 GeneID:475465 KEGG:cfa:475465
NextBio:20851305 Uniprot:E2QUZ3
Length = 712
Score = 105 (42.0 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 27/83 (32%), Positives = 49/83 (59%)
Query: 44 RELEGHQGCVNAISWNS--KGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKF 101
R L GH G V W+S + +++ISGS D + VW+ + + +H++ GH++ V C
Sbjct: 420 RTLVGHTGGV----WSSQMRDNIIISGSTDRTLKVWNAETGECIHTLY-GHTSTVRCMHL 474
Query: 102 VPETSDELVVSGAGDAEVRLFNL 124
++ VVSG+ DA +R++++
Sbjct: 475 ----HEKRVVSGSRDATLRVWDI 493
Score = 98 (39.6 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 24/84 (28%), Positives = 45/84 (53%)
Query: 40 LSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCT 99
L + L+GH V G+ ++SGSDD + VWS + K L ++ GH+ V+ +
Sbjct: 375 LKSPKVLKGHDDHV-ITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTL-VGHTGGVWSS 432
Query: 100 KFVPETSDELVVSGAGDAEVRLFN 123
+ D +++SG+ D ++++N
Sbjct: 433 QM----RDNIIISGSTDRTLKVWN 452
Score = 95 (38.5 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 21/58 (36%), Positives = 32/58 (55%)
Query: 642 IASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGI-DNTIKIWTP 698
+ SGS D +W+ +TG+ + +L+G A V CVQ +D SG D +K+W P
Sbjct: 479 VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQ---YDGRRVVSGAYDFMVKVWDP 533
Score = 90 (36.7 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 23/80 (28%), Positives = 44/80 (55%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L GH V + ++ G ++SG+ D + VW + LH+++ GH+ V+ +F
Sbjct: 502 LMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETETCLHTLQ-GHTNRVYSLQF---- 554
Query: 106 SDEL-VVSGAGDAEVRLFNL 124
D + VVSG+ D +R++++
Sbjct: 555 -DGIHVVSGSLDTSIRVWDV 573
Score = 87 (35.7 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 24/81 (29%), Positives = 41/81 (50%)
Query: 638 RGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDC-VVATSGIDNTIKIW 696
+ + + SG+ D IW+ +TG+ ++ L G + V C F+ V TS D T+K+W
Sbjct: 595 KDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLW 654
Query: 697 TPSAS--VPSIV---SGGAAG 712
+ ++V SGG+ G
Sbjct: 655 DLKTGEFIRNLVTLESGGSGG 675
Score = 86 (35.3 bits), Expect = 0.00049, Sum P(2) = 0.00049
Identities = 25/78 (32%), Positives = 39/78 (50%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L GH V + + K ++SGS D + VW + + LH + GH A V C ++
Sbjct: 462 LYGHTSTVRCMHLHEKR--VVSGSRDATLRVWDIETGQCLHVL-MGHVAAVRCVQY---- 514
Query: 106 SDELVVSGAGDAEVRLFN 123
VVSGA D V++++
Sbjct: 515 DGRRVVSGAYDFMVKVWD 532
Score = 85 (35.0 bits), Expect = 7.7e-06, Sum P(2) = 7.7e-06
Identities = 17/58 (29%), Positives = 33/58 (56%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW 696
G ++ SGS D +W+ +TG I L G +++ + ++ D ++ + D+T+KIW
Sbjct: 556 GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK--DNILVSGNADSTVKIW 611
>TAIR|locus:2148965 [details] [associations]
symbol:TOZ "AT5G16750" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0009793
"embryo development ending in seed dormancy" evidence=RCA;IMP]
[GO:0009880 "embryonic pattern specification" evidence=RCA;IMP]
[GO:0051301 "cell division" evidence=RCA;IMP] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0006406 "mRNA export from nucleus"
evidence=RCA] [GO:0006606 "protein import into nucleus"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010182 "sugar mediated signaling
pathway" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0048366
"leaf development" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GO:GO:0005730 GO:GO:0051301 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009793 GO:GO:0009880 GO:GO:0006364
HSSP:P16649 GO:GO:0032040 EMBL:AL391147 HOGENOM:HOG000188765
KO:K14555 OMA:ADSKLIR IPI:IPI00523827 PIR:T51507 RefSeq:NP_568338.2
UniGene:At.24110 ProteinModelPortal:Q9LFE2 SMR:Q9LFE2 STRING:Q9LFE2
PRIDE:Q9LFE2 EnsemblPlants:AT5G16750.1 GeneID:831538
KEGG:ath:AT5G16750 TAIR:At5g16750 InParanoid:Q9LFE2
PhylomeDB:Q9LFE2 ProtClustDB:CLSN2680022 Genevestigator:Q9LFE2
Uniprot:Q9LFE2
Length = 876
Score = 125 (49.1 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 36/138 (26%), Positives = 70/138 (50%)
Query: 37 VRRLSQERELEGHQGCVNAISW--NSKGSLLI-SGSDDTHINVWSYSSRKLLHSIETGHS 93
V +S L GH+ V ++ +S G++LI +GS D + +W+ +S+ + + TGH+
Sbjct: 388 VATMSCSYVLAGHKEVVLSLDTCVSSSGNVLIVTGSKDKTVRLWNATSKSCI-GVGTGHN 446
Query: 94 ANVFCTKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKL 153
++ F + S VSG+GD +++++L S + + ++ H + + +
Sbjct: 447 GDILAVAFAKK-SFSFFVSGSGDRTLKVWSLDGISEDSEEPINLKTRSVVAAHDKDINSV 505
Query: 154 AVEVGNPHVVWSASEDGT 171
AV N +V + SED T
Sbjct: 506 AV-ARNDSLVCTGSEDRT 522
Score = 117 (46.2 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 38/164 (23%), Positives = 73/164 (44%)
Query: 28 HSLQMHSSLVRRLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHS 87
HS Q+ + L R +GH+G V ++ ++ G LL + D + VW H
Sbjct: 80 HSRQIRVWDLETLKCIRSWKGHEGPVMGMACHASGGLLATAGADRKVLVWDVDGGFCTHY 139
Query: 88 IETGHSANVFCTKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHT 147
GH V F P+++ +++SG+ DA VR+++L+ + + + A+ + H
Sbjct: 140 FR-GHKGVVSSILFHPDSNKNILISGSDDATVRVWDLN---AKNTEKKCL---AIMEKHF 192
Query: 148 RRVKKLAVEVGNPHVVWSASEDGTLRQHDFRQGSSCPPAGSSHQ 191
V +A+ ++SA D + D SC ++++
Sbjct: 193 SAVTSIALSEDGL-TLFSAGRDKVVNLWDLHD-YSCKATVATYE 234
Score = 77 (32.2 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 28/98 (28%), Positives = 43/98 (43%)
Query: 603 DRIPYQPETVIDMKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLI 662
D I E I++K R V + DI + + + + +GS+D IW +
Sbjct: 477 DGISEDSEEPINLKTRSVVAAH-DKDINSVA-VARNDSLVCTGSEDRTASIWRLPDLVHV 534
Query: 663 KMLLGDEAVVNCVQCHPFD-CVVATSGIDNTIKIWTPS 699
L G + + V+ D CV+ SG D T+KIW S
Sbjct: 535 VTLKGHKRRIFSVEFSTVDQCVMTASG-DKTVKIWAIS 571
Score = 66 (28.3 bits), Expect = 5.9e-05, Sum P(2) = 5.9e-05
Identities = 27/114 (23%), Positives = 51/114 (44%)
Query: 610 ETVIDMKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDE 669
ET + + +R VG+ D+K FLG ++A ++ +++ T +L G +
Sbjct: 345 ETELVLSKRLVGYNEEIADMK---FLGDEEQFLAVATNLEEVRVYDVATMSCSYVLAGHK 401
Query: 670 AVV----NCVQCHPFDCVVATSGIDNTIKIWTPSASVPSIVSGGAAGPDTADVL 719
VV CV + ++ T D T+++W +A+ S + G D+L
Sbjct: 402 EVVLSLDTCVSSSG-NVLIVTGSKDKTVRLW--NATSKSCIGVGTG--HNGDIL 450
Score = 59 (25.8 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 20/83 (24%), Positives = 35/83 (42%)
Query: 619 YVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCH 678
+ GH + + +ASF+ +++ G+D G +W T I E V +
Sbjct: 579 FEGHTS---SVLRASFITDGTQFVSCGAD-GLLKLWNVNTSECIATYDQHEDKVWALAVG 634
Query: 679 PFDCVVATSGIDNTIKIWTPSAS 701
++AT G D I +W S +
Sbjct: 635 KKTEMIATGGGDAVINLWHDSTA 657
>UNIPROTKB|Q676U5 [details] [associations]
symbol:ATG16L1 "Autophagy-related protein 16-1"
species:9606 "Homo sapiens" [GO:0015031 "protein transport"
evidence=IEA] [GO:0000421 "autophagic vacuole membrane"
evidence=IEA] [GO:0034045 "pre-autophagosomal structure membrane"
evidence=IEA] [GO:0005776 "autophagic vacuole" evidence=ISS]
[GO:0051260 "protein homooligomerization" evidence=NAS] [GO:0000045
"autophagic vacuole assembly" evidence=NAS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015031 EMBL:CH471063 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AY398617 EMBL:EF079889
EMBL:EF079890 EMBL:AY358182 EMBL:AK026330 EMBL:AK027854
EMBL:AK123876 EMBL:AC013726 EMBL:BC071846 EMBL:AL834526
IPI:IPI00432751 IPI:IPI00446614 IPI:IPI00470446 IPI:IPI00555905
IPI:IPI00797150 RefSeq:NP_001177195.1 RefSeq:NP_001177196.1
RefSeq:NP_060444.3 RefSeq:NP_110430.5 RefSeq:NP_942593.2
UniGene:Hs.529322 PDB:4GDK PDB:4GDL PDBsum:4GDK PDBsum:4GDL
ProteinModelPortal:Q676U5 SMR:Q676U5 DIP:DIP-27552N IntAct:Q676U5
MINT:MINT-1141152 STRING:Q676U5 PhosphoSite:Q676U5 DMDM:62510482
PaxDb:Q676U5 PRIDE:Q676U5 DNASU:55054 Ensembl:ENST00000347464
Ensembl:ENST00000373525 Ensembl:ENST00000392017
Ensembl:ENST00000392020 GeneID:55054 KEGG:hsa:55054 UCSC:uc002vty.3
UCSC:uc002vtz.3 UCSC:uc002vua.3 CTD:55054 GeneCards:GC02P234118
HGNC:HGNC:21498 HPA:HPA012577 MIM:610767 MIM:611081
neXtProt:NX_Q676U5 Orphanet:206 PharmGKB:PA134902949
HOGENOM:HOG000112569 HOVERGEN:HBG050534 OrthoDB:EOG4SXNC8
GenomeRNAi:55054 NextBio:58531 ArrayExpress:Q676U5 Bgee:Q676U5
CleanEx:HS_ATG16L1 Genevestigator:Q676U5 GermOnline:ENSG00000085978
GO:GO:0005776 GO:GO:0000421 GO:GO:0034045 GO:GO:0000045
GO:GO:0051260 InterPro:IPR013923 Pfam:PF08614 Uniprot:Q676U5
Length = 607
Score = 117 (46.2 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 31/108 (28%), Positives = 56/108 (51%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L G + +I ++S GS L++ S+D +W+ +L H++ TGHS V KF+ +
Sbjct: 362 LSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTL-TGHSGKVLSAKFLLDN 420
Query: 106 SDELVVSGAGDAEVRLFNL-SR------FSGRGLDDNAITPSALYQCH 146
+ +VSG+ D ++L++L S+ F+G +D T + H
Sbjct: 421 AR--IVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCVMSGH 466
Score = 73 (30.8 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 626 GTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAV-VNCVQCHP 679
G+D + F G Y+A+GS +G +IW TG++ K+L + +N V P
Sbjct: 534 GSDWTRVVF-SPDGSYVAAGSAEGSLYIWSVLTGKVEKVLSKQHSSSINAVAWSP 587
>ZFIN|ZDB-GENE-090313-79 [details] [associations]
symbol:fbxw7 "F-box and WD repeat domain containing
7" species:7955 "Danio rerio" [GO:0045746 "negative regulation of
Notch signaling pathway" evidence=IMP] [GO:0001525 "angiogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
ZFIN:ZDB-GENE-090313-79 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0001525 SUPFAM:SSF81383 GO:GO:0045746
GeneTree:ENSGT00690000101849 EMBL:AL953881 IPI:IPI00499035
Ensembl:ENSDART00000086512 Bgee:F1RCB5 Uniprot:F1RCB5
Length = 760
Score = 105 (42.0 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 27/83 (32%), Positives = 49/83 (59%)
Query: 44 RELEGHQGCVNAISWNS--KGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKF 101
R L GH G V W+S + +++ISGS D + VW+ + + +H++ GH++ V C
Sbjct: 468 RTLVGHTGGV----WSSQMRDNIIISGSTDRTLKVWNAETGECIHTLY-GHTSTVRCMHL 522
Query: 102 VPETSDELVVSGAGDAEVRLFNL 124
++ VVSG+ DA +R++++
Sbjct: 523 ----HEKRVVSGSRDATLRVWDI 541
Score = 98 (39.6 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 24/84 (28%), Positives = 45/84 (53%)
Query: 40 LSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCT 99
L + L+GH V G+ ++SGSDD + VWS + K L ++ GH+ V+ +
Sbjct: 423 LKSPKVLKGHDDHV-ITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTL-VGHTGGVWSS 480
Query: 100 KFVPETSDELVVSGAGDAEVRLFN 123
+ D +++SG+ D ++++N
Sbjct: 481 QM----RDNIIISGSTDRTLKVWN 500
Score = 95 (38.5 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 21/58 (36%), Positives = 32/58 (55%)
Query: 642 IASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGI-DNTIKIWTP 698
+ SGS D +W+ +TG+ + +L+G A V CVQ +D SG D +K+W P
Sbjct: 527 VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQ---YDGRRVVSGAYDFMVKVWDP 581
Score = 90 (36.7 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 23/80 (28%), Positives = 44/80 (55%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L GH V + ++ G ++SG+ D + VW + LH+++ GH+ V+ +F
Sbjct: 550 LMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETETCLHTLQ-GHTNRVYSLQF---- 602
Query: 106 SDEL-VVSGAGDAEVRLFNL 124
D + VVSG+ D +R++++
Sbjct: 603 -DGIHVVSGSLDTSIRVWDV 621
Score = 86 (35.3 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 24/81 (29%), Positives = 41/81 (50%)
Query: 638 RGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDC-VVATSGIDNTIKIW 696
+ + + SG+ D IW+ +TG+ ++ L G + V C F+ V TS D T+K+W
Sbjct: 643 KDNILVSGNADSTVKIWDIKTGQCLQTLQGPHKHQSAVTCLQFNKNFVITSSDDGTVKLW 702
Query: 697 TPSAS--VPSIV---SGGAAG 712
+ ++V SGG+ G
Sbjct: 703 DLRTGEFIRNLVTLESGGSGG 723
Score = 86 (35.3 bits), Expect = 0.00072, Sum P(2) = 0.00072
Identities = 25/78 (32%), Positives = 39/78 (50%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L GH V + + K ++SGS D + VW + + LH + GH A V C ++
Sbjct: 510 LYGHTSTVRCMHLHEKR--VVSGSRDATLRVWDIETGQCLHVL-MGHVAAVRCVQY---- 562
Query: 106 SDELVVSGAGDAEVRLFN 123
VVSGA D V++++
Sbjct: 563 DGRRVVSGAYDFMVKVWD 580
Score = 85 (35.0 bits), Expect = 9.0e-06, Sum P(2) = 9.0e-06
Identities = 17/58 (29%), Positives = 33/58 (56%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW 696
G ++ SGS D +W+ +TG I L G +++ + ++ D ++ + D+T+KIW
Sbjct: 604 GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK--DNILVSGNADSTVKIW 659
>ASPGD|ASPL0000006405 [details] [associations]
symbol:AN6960 species:162425 "Emericella nidulans"
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046873 "metal ion transmembrane transporter
activity" evidence=IEA] InterPro:IPR002110 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002523 InterPro:IPR015943
Pfam:PF00400 Pfam:PF01544 PROSITE:PS50082 PROSITE:PS50088
PROSITE:PS50294 SMART:SM00248 SMART:SM00320 GO:GO:0016020
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:BN001301 GO:GO:0046873 EMBL:AACD01000116
RefSeq:XP_664564.1 ProteinModelPortal:Q5AXM0
EnsemblFungi:CADANIAT00007778 GeneID:2870438 KEGG:ani:AN6960.2
Uniprot:Q5AXM0
Length = 1878
Score = 123 (48.4 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 43/148 (29%), Positives = 71/148 (47%)
Query: 41 SQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTK 100
S + LEGH CVN++S++ LL S SDD + +W ++ L ++E GH N +
Sbjct: 422 SLQNVLEGHDDCVNSVSFSPDSRLLASASDDRTVKIWHAATGSLQRTLE-GH--NDWVRS 478
Query: 101 FVPETSDELVVSGAGDAEVRLFNLSRFS-GRGLD--DNAITPSALYQCHTRRVKKLAVEV 157
V L+ S + D V++++ + L+ DN + S ++ H R+ LA
Sbjct: 479 VVFSHDSRLIASASDDMTVKIWDTATVPLQNNLESHDNWVR-SVVFS-HDSRL--LASAS 534
Query: 158 GNPHV-VW---SASEDGTLRQHDFRQGS 181
+ V +W + S + TL HD R S
Sbjct: 535 DDMTVKIWDTATGSLENTLEGHDDRVNS 562
Score = 107 (42.7 bits), Expect = 4.9e-06, Sum P(2) = 4.9e-06
Identities = 36/138 (26%), Positives = 63/138 (45%)
Query: 43 ERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFV 102
+ LEGH V ++ ++ LL S SDD + +W ++ L ++ GH+ +V F
Sbjct: 298 QNTLEGHNEWVKSVVFSHDSRLLASASDDGTVKIWDTATGTLQRMLK-GHNDSVRSVVFS 356
Query: 103 PETSDELVVSGAGDAEVRLFNLSRFSGRG-LDDNAITPSALYQCHTRRVKKLAVEVGNPH 161
++ L+ SG+ D VR++ + R +D+ + A+ H R A + GN
Sbjct: 357 HDS--RLIASGSNDRTVRIWETTTGLLRHTFEDHEDSVMAVSFAHDSRRLASASDGGNVK 414
Query: 162 VVW---SASEDGTLRQHD 176
+ W + S L HD
Sbjct: 415 I-WDTRTGSLQNVLEGHD 431
Score = 106 (42.4 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 36/128 (28%), Positives = 55/128 (42%)
Query: 570 GSLNVRIHRRGDSARETVDANXXXXXXXXXXQNDRIPYQPETVIDM-KQRYVGHCNVGTD 628
G+L + DS R V ++ NDR ET + + + H +
Sbjct: 337 GTLQRMLKGHNDSVRSVVFSHDSRLIASGS--NDRTVRIWETTTGLLRHTFEDHED---S 391
Query: 629 IKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSG 688
+ SF +AS SD G IW+ +TG L +L G + VN V P ++A++
Sbjct: 392 VMAVSF-AHDSRRLASASDGGNVKIWDTRTGSLQNVLEGHDDCVNSVSFSPDSRLLASAS 450
Query: 689 IDNTIKIW 696
D T+KIW
Sbjct: 451 DDRTVKIW 458
Score = 94 (38.1 bits), Expect = 4.9e-06, Sum P(2) = 4.9e-06
Identities = 22/55 (40%), Positives = 30/55 (54%)
Query: 642 IASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW 696
+AS SDD IW+ TG L L G + VN V P ++A++ D T+KIW
Sbjct: 530 LASASDDMTVKIWDTATGSLENTLEGHDDRVNSVSFSPDSRLLASASDDGTVKIW 584
Score = 90 (36.7 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 24/94 (25%), Positives = 48/94 (51%)
Query: 30 LQMHSSLVRRLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIE 89
LQ+++S + L + +GH V ++S++ LL S S D + +W ++ L +++E
Sbjct: 245 LQVYASAL--LFSPAQFKGHDRAVGSVSFSHDSRLLASASGDGTVKIWDTATSFLQNTLE 302
Query: 90 TGHSANVFCTKFVPETSDELVVSGAGDAEVRLFN 123
GH N + V L+ S + D V++++
Sbjct: 303 -GH--NEWVKSVVFSHDSRLLASASDDGTVKIWD 333
Score = 83 (34.3 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 23/62 (37%), Positives = 32/62 (51%)
Query: 642 IASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIWTPSAS 701
+AS SDD IW TG L + L G V V ++A++ D T+KIW +A+
Sbjct: 446 LASASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFSHDSRLIASASDDMTVKIWD-TAT 504
Query: 702 VP 703
VP
Sbjct: 505 VP 506
Score = 68 (29.0 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 19/56 (33%), Positives = 29/56 (51%)
Query: 642 IASGSDDGRWFIWEKQTGRLIKMLLGDEAV-VNCVQCHPFDCVVATSGIDNTIKIW 696
+AS SDDG IW TG + G V ++ H + ++A++ D T+KIW
Sbjct: 572 LASASDDGTVKIWYAATGTVQHTFDGSGRVAISLAFSHTSN-LLASAMDDGTVKIW 626
>UNIPROTKB|B3KVK2 [details] [associations]
symbol:GNB1 "cDNA FLJ16663 fis, clone THYMU2005759, highly
similar to Guanine nucleotide-binding proteinG(I)/G(S)/G(T) subunit
beta 1" species:9606 "Homo sapiens" [GO:0001917 "photoreceptor
inner segment" evidence=IEA] [GO:0005834 "heterotrimeric G-protein
complex" evidence=IEA] [GO:0007200 "phospholipase C-activating
G-protein coupled receptor signaling pathway" evidence=IEA]
[GO:0007204 "elevation of cytosolic calcium ion concentration"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
[GO:0010659 "cardiac muscle cell apoptotic process" evidence=IEA]
[GO:0030425 "dendrite" evidence=IEA] [GO:0042622 "photoreceptor
outer segment membrane" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] [GO:0050909 "sensory perception of taste"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0071456 "cellular response to hypoxia"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0060041 GO:GO:0007204 GO:GO:0007200 GO:GO:0001750
EMBL:AL109917 EMBL:AL031282 GO:GO:0050909 GO:GO:0005834
HOVERGEN:HBG000188 UniGene:Hs.430425 HGNC:HGNC:4396 ChiTaRS:GNB1
EMBL:AK122949 IPI:IPI00642117 ProteinModelPortal:B3KVK2 SMR:B3KVK2
STRING:B3KVK2 PRIDE:B3KVK2 Ensembl:ENST00000455156
OrthoDB:EOG4GHZR3 ArrayExpress:B3KVK2 Bgee:B3KVK2 Uniprot:B3KVK2
Length = 240
Score = 100 (40.3 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 31/100 (31%), Positives = 48/100 (48%)
Query: 44 RELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP 103
REL GH G ++ + ++ S S DT +W + + + TGH+ +V P
Sbjct: 37 RELAGHTGYLSCCRFLDDNQIVTS-SGDTTCALWDIETGQQTTTF-TGHTGDVMSLSLAP 94
Query: 104 ETSDELVVSGAGDAEVRLFNLSR------FSGRGLDDNAI 137
+T L VSGA DA +L+++ F+G D NAI
Sbjct: 95 DT--RLFVSGACDASAKLWDVREGMCRQTFTGHESDINAI 132
Score = 83 (34.3 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 23/83 (27%), Positives = 36/83 (43%)
Query: 42 QERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKF 101
Q GH G V ++S L +SG+ D +W + TGH +++ F
Sbjct: 76 QTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTF-TGHESDINAICF 134
Query: 102 VPETSDELVVSGAGDAEVRLFNL 124
P + +G+ DA RLF+L
Sbjct: 135 FP--NGNAFATGSDDATCRLFDL 155
Score = 78 (32.5 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 22/83 (26%), Positives = 35/83 (42%)
Query: 614 DMKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVN 673
D + H N+ I SF + G + +G DD +W+ +L G + V+
Sbjct: 158 DQELMTYSHDNIICGITSVSF-SKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVS 216
Query: 674 CVQCHPFDCVVATSGIDNTIKIW 696
C+ VAT D+ +KIW
Sbjct: 217 CLGVTDDGMAVATGSWDSFLKIW 239
>UNIPROTKB|P93397 [details] [associations]
symbol:P93397 "Guanine nucleotide-binding protein subunit
beta-1" species:4097 "Nicotiana tabacum" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319 InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:Z84820 PIR:T04086 ProteinModelPortal:P93397
IntAct:P93397 Uniprot:P93397
Length = 377
Score = 95 (38.5 bits), Expect = 5.1e-06, Sum P(3) = 5.1e-06
Identities = 24/82 (29%), Positives = 43/82 (52%)
Query: 44 RELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP 103
R L+GH G V ++ W + + ++S S D + VW+ + + H+I+ + + C F P
Sbjct: 59 RILQGHTGKVYSLDWTPEKNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCA-FSP 117
Query: 104 ETSDELVVSGAGDAEVRLFNLS 125
S + V G D+ +FNL+
Sbjct: 118 --SGQSVACGGLDSVCSIFNLN 137
Score = 77 (32.2 bits), Expect = 5.1e-06, Sum P(3) = 5.1e-06
Identities = 22/63 (34%), Positives = 32/63 (50%)
Query: 188 SSHQECRNILLDLRCGAKRSLADPPKQ---TLSLKSCDISSTRPHLLLVGGSDAFARLYD 244
S Q C +L D+ G + S+ Q T ++S ISS+ P L + G D ARL+D
Sbjct: 176 SGDQTC--VLWDITTGLRTSVFGGEFQSGHTADVQSVSISSSNPRLFVSGSCDTTARLWD 233
Query: 245 RRM 247
R+
Sbjct: 234 TRV 236
Score = 53 (23.7 bits), Expect = 5.1e-06, Sum P(3) = 5.1e-06
Identities = 11/39 (28%), Positives = 20/39 (51%)
Query: 270 MHLSEHGRSSL-HLTHVTFSPNGEEVLLSYSGEHVYLMD 307
++ HG + H+T + FS +G + + YS Y+ D
Sbjct: 285 VYYQPHGDGDIPHVTSMAFSISGRLLFVGYSNGDCYVWD 323
Score = 52 (23.4 bits), Expect = 6.4e-06, Sum P(3) = 6.4e-06
Identities = 13/62 (20%), Positives = 26/62 (41%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLG----DEAVVNCVQCHPFDCVVATSGIDNTIK 694
G + G +G ++W+ +++ L G E ++C+ + T D +K
Sbjct: 307 GRLLFVGYSNGDCYVWDTLLAKVVLNLGGVQNSHEGRISCLGLSADGSALCTGSWDTNLK 366
Query: 695 IW 696
IW
Sbjct: 367 IW 368
>TAIR|locus:2028481 [details] [associations]
symbol:SCD1 "STOMATAL CYTOKINESIS-DEFECTIVE 1"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0000911 "cytokinesis by cell plate formation"
evidence=RCA;IMP] [GO:0009825 "multidimensional cell growth"
evidence=IMP] [GO:0010052 "guard cell differentiation"
evidence=IMP] [GO:0010235 "guard mother cell cytokinesis"
evidence=IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0000226 "microtubule cytoskeleton organization"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0009825 HSSP:P16649 GO:GO:0080008 InterPro:IPR005112
InterPro:IPR001194 InterPro:IPR005113 Pfam:PF03455 Pfam:PF02141
Pfam:PF03456 SMART:SM00801 SMART:SM00799 SMART:SM00800
PROSITE:PS50947 PROSITE:PS50211 PROSITE:PS50946 EMBL:AY082605
IPI:IPI00522154 RefSeq:NP_850959.1 UniGene:At.38309
ProteinModelPortal:Q8RXA7 SMR:Q8RXA7 PaxDb:Q8RXA7 PRIDE:Q8RXA7
EnsemblPlants:AT1G49040.1 GeneID:841327 KEGG:ath:AT1G49040
TAIR:At1g49040 HOGENOM:HOG000029412 InParanoid:Q8RXA7 OMA:YRNFIEN
PhylomeDB:Q8RXA7 ProtClustDB:CLSN2680426 Genevestigator:Q8RXA7
GO:GO:0010235 Uniprot:Q8RXA7
Length = 1187
Score = 124 (48.7 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
Identities = 29/79 (36%), Positives = 48/79 (60%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L+GH G V AIS + +G + +SGSDD + VW + +LL ++ GH + V C K +
Sbjct: 895 LKGHTGTVRAIS-SDRGKI-VSGSDDLSVIVWDKQTTQLLEELK-GHDSQVSCVKML--- 948
Query: 106 SDELVVSGAGDAEVRLFNL 124
S E V++ A D V+++++
Sbjct: 949 SGERVLTAAHDGTVKMWDV 967
Score = 72 (30.4 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
Identities = 16/57 (28%), Positives = 24/57 (42%)
Query: 640 DYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW 696
D + +GSDD +W G +L V V+ PFD + T D ++ W
Sbjct: 1033 DTLITGSDDWTARVWSVSRGSCDAVLACHAGPVQSVEYSPFDKGIITGSADGLLRFW 1089
Score = 58 (25.5 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 25/100 (25%), Positives = 42/100 (42%)
Query: 614 DMKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVN 673
DM VG C+ + I + G A+G D IW+ ++G+ + L G +
Sbjct: 970 DMCVATVGRCS--SAILSLEYDDSTGILAAAGRDTVA-NIWDIRSGKQMHKLKGHTKWIR 1026
Query: 674 CVQCHPFDCVVATSGIDNTIKIWTPSASVPSIVSGGAAGP 713
++ D ++ T D T ++W+ S V AGP
Sbjct: 1027 SIRMVE-DTLI-TGSDDWTARVWSVSRGSCDAVLACHAGP 1064
>ZFIN|ZDB-GENE-041014-277 [details] [associations]
symbol:wdr26b "WD repeat domain 26b" species:7955
"Danio rerio" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667
ZFIN:ZDB-GENE-041014-277 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AL929435 HSSP:P16649
GeneTree:ENSGT00530000063585 PROSITE:PS50897 InterPro:IPR006595
SMART:SM00668 EMBL:BX004824 IPI:IPI00504405 RefSeq:NP_001189371.1
UniGene:Dr.156389 UniGene:Dr.79849 ProteinModelPortal:Q5SP67
PRIDE:Q5SP67 Ensembl:ENSDART00000029894 GeneID:564794
KEGG:dre:564794 CTD:564794 HOGENOM:HOG000160946 HOVERGEN:HBG083958
InParanoid:Q5SP67 OMA:IRGQFYQ OrthoDB:EOG4GHZNV NextBio:20885564
Bgee:Q5SP67 Uniprot:Q5SP67
Length = 576
Score = 126 (49.4 bits), Expect = 5.2e-06, Sum P(3) = 5.2e-06
Identities = 26/67 (38%), Positives = 40/67 (59%)
Query: 634 FLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHP-FDCVVATSGIDNT 692
F G D+IASGS+D + +IW K++ I L G VNCV +P ++A++ D T
Sbjct: 490 FGGHNEDFIASGSEDHKVYIWHKRSELPIVELTGHTRTVNCVSWNPCIPSLMASASDDGT 549
Query: 693 IKIWTPS 699
++IW P+
Sbjct: 550 VRIWGPA 556
Score = 65 (27.9 bits), Expect = 5.2e-06, Sum P(3) = 5.2e-06
Identities = 21/72 (29%), Positives = 38/72 (52%)
Query: 58 WNSKGSLLISGSDDTHINVWSYS----SRKLLHSIETGHSANVFCTKFVPETSDELVVSG 113
+++ G+ L +GS DT + +W KLL ++E GH+ V + P+ L+ G
Sbjct: 275 FSNDGTKLATGSKDTTVIIWQVEPDTHQLKLLRTLE-GHAYGVSYLAWSPDDV-YLIACG 332
Query: 114 AGD-AEVRLFNL 124
D +E+ L+N+
Sbjct: 333 PDDCSELWLWNV 344
Score = 62 (26.9 bits), Expect = 1.0e-05, Sum P(3) = 1.0e-05
Identities = 16/63 (25%), Positives = 32/63 (50%)
Query: 44 RELEGHQGCVNAISWNSKGSLLIS-GSDD-THINVWSYSSRKLLHSIETGHSANVFCTKF 101
R LEGH V+ ++W+ LI+ G DD + + +W+ + +L + H ++ +
Sbjct: 307 RTLEGHAYGVSYLAWSPDDVYLIACGPDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAW 366
Query: 102 VPE 104
P+
Sbjct: 367 NPD 369
Score = 45 (20.9 bits), Expect = 0.00049, Sum P(3) = 0.00049
Identities = 5/22 (22%), Positives = 13/22 (59%)
Query: 47 EGHQGCVNAISWNSKGSLLISG 68
+ H+ + +++WN G ++G
Sbjct: 355 QSHEDSLTSVAWNPDGKRFVTG 376
Score = 39 (18.8 bits), Expect = 5.2e-06, Sum P(3) = 5.2e-06
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 286 TFSPNGEEVLLSYSGEHVYLMDV 308
T S NG LL+ + + V+L D+
Sbjct: 445 TVSKNGRLALLNVATQGVHLWDL 467
>SGD|S000002304 [details] [associations]
symbol:COP1 "Alpha subunit of COPI vesicle coatomer complex"
species:4932 "Saccharomyces cerevisiae" [GO:0030126 "COPI vesicle
coat" evidence=IEA;ISS;IMP] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] [GO:0006890 "retrograde
vesicle-mediated transport, Golgi to ER" evidence=IMP] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0000139 "Golgi membrane"
evidence=IEA] [GO:0030663 "COPI-coated vesicle membrane"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000002304 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BK006938 GO:GO:0006888
GO:GO:0030126 GO:GO:0006890 GO:GO:0043130 EMBL:X97751
HOGENOM:HOG000195913 KO:K05236 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 OrthoDB:EOG40VZXP EMBL:Z46617
EMBL:X83754 EMBL:Z74193 EMBL:Z74192 PIR:S67692 RefSeq:NP_010136.1
PDB:3MKQ PDB:3MV2 PDB:3MV3 PDBsum:3MKQ PDBsum:3MV2 PDBsum:3MV3
ProteinModelPortal:P53622 SMR:P53622 DIP:DIP-2582N IntAct:P53622
MINT:MINT-422687 STRING:P53622 PaxDb:P53622 PeptideAtlas:P53622
EnsemblFungi:YDL145C GeneID:851410 KEGG:sce:YDL145C CYGD:YDL145c
OMA:YDQHNPF EvolutionaryTrace:P53622 NextBio:968591
Genevestigator:P53622 GermOnline:YDL145C Uniprot:P53622
Length = 1201
Score = 127 (49.8 bits), Expect = 5.3e-06, Sum P(2) = 5.3e-06
Identities = 27/80 (33%), Positives = 49/80 (61%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L GH V + ++ + +IS SDD I +W++ +RK + + TGH+ V C +F P
Sbjct: 91 LTGHLDYVRTVFFHRELPWIISASDDQTIRIWNWQNRKEIACL-TGHNHFVMCAQFHP-- 147
Query: 106 SDELVVSGAGDAEVRLFNLS 125
+D+L+VS + D +R++++S
Sbjct: 148 TDDLIVSASLDETIRIWDIS 167
Score = 69 (29.3 bits), Expect = 5.3e-06, Sum P(2) = 5.3e-06
Identities = 17/64 (26%), Positives = 28/64 (43%)
Query: 642 IASGSDDGRWFIWEKQTGRL--IKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIWTPS 699
I SGSDD + +W + + G V+ V HP ++ + G D T+++W
Sbjct: 224 IVSGSDDRQVKLWRMSATKAWEVDTCRGHTNNVDSVIFHPHQNLIISVGEDKTLRVWDLD 283
Query: 700 ASVP 703
P
Sbjct: 284 KRTP 287
Score = 52 (23.4 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 12/42 (28%), Positives = 21/42 (50%)
Query: 661 LIKMLL-GDEAVVNCVQCHPFDCVVATSGIDNTIKIWTPSAS 701
++K +L G VN HP ++ + D +K+W SA+
Sbjct: 200 VVKFILEGHTRGVNWASFHPTLPLIVSGSDDRQVKLWRMSAT 241
>UNIPROTKB|Q6GMD2 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8355
"Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1 complex"
evidence=ISS] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISS]
[GO:0035327 "transcriptionally active chromatin" evidence=ISS]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GO:GO:0055087 CTD:80349 HOVERGEN:HBG059813 KO:K12602
EMBL:BC074136 RefSeq:NP_001086055.1 UniGene:Xl.23922
ProteinModelPortal:Q6GMD2 GeneID:444484 KEGG:xla:444484
Xenbase:XB-GENE-5751613 Uniprot:Q6GMD2
Length = 305
Score = 106 (42.4 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 25/86 (29%), Positives = 45/86 (52%)
Query: 39 RLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFC 98
RL + LEGHQ V ++ + G+++ S S D HI +W S K + SI+ G + +
Sbjct: 53 RLEMQWALEGHQLGVVSVDVSPSGNIMASSSLDAHIRLWDLESGKQIRSIDAG-PVDAWS 111
Query: 99 TKFVPETSDELVVSGAGDAEVRLFNL 124
F P++ + +G+ +V +F +
Sbjct: 112 VAFSPDSQH--LATGSHVGKVNIFGV 135
Score = 94 (38.1 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 29/92 (31%), Positives = 47/92 (51%)
Query: 44 RELEGHQGCVNAISW--NSK-GS-LLISGSDDTHINVWSYSSRKL-LHSIETGHSANVFC 98
++ H+ + ++ W NS GS L+ISGS D + VW +S +L + GH V
Sbjct: 10 KQEHAHEDAIWSVGWGKNSNDGSELVISGSLDDLVKVWKWSDERLEMQWALEGHQLGVVS 69
Query: 99 TKFVPETSDELVVSGAGDAEVRLFNLSRFSGR 130
P S ++ S + DA +RL++L SG+
Sbjct: 70 VDVSP--SGNIMASSSLDAHIRLWDLE--SGK 97
Score = 75 (31.5 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 22/71 (30%), Positives = 37/71 (52%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW-T 697
G Y+ASG+ DG I++ TG+L+ L G + + ++ T+ D IKI+
Sbjct: 160 GKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSTDSQLLVTASDDGYIKIYDV 219
Query: 698 PSASVPSIVSG 708
AS+ + +SG
Sbjct: 220 QHASLAATLSG 230
Score = 70 (29.7 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 19/59 (32%), Positives = 28/59 (47%)
Query: 642 IASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIWTPSA 700
+ + SDDG I++ Q L L G + V V P D +S D ++K+W SA
Sbjct: 205 LVTASDDGYIKIYDVQHASLAATLSGHGSWVLNVAFSPDDAHFVSSSSDKSVKVWDVSA 263
>UNIPROTKB|Q229Z6 [details] [associations]
symbol:TTHERM_01308010 "POC1 centriolar protein homolog"
species:312017 "Tetrahymena thermophila SB210" [GO:0005932
"microtubule basal body" evidence=IDA] [GO:0051297 "centrosome
organization" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0051297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GO:GO:0030030 KO:K16482 EMBL:GG662475 RefSeq:XP_001029778.1
UniGene:Tth.7377 ProteinModelPortal:Q229Z6 EnsemblProtists:EAR82115
GeneID:7835570 KEGG:tet:TTHERM_01308010 ProtClustDB:CLSZ2449456
Uniprot:Q229Z6
Length = 634
Score = 112 (44.5 bits), Expect = 6.0e-06, Sum P(3) = 6.0e-06
Identities = 46/182 (25%), Positives = 80/182 (43%)
Query: 4 FPFHDGSIYDMLDTRHTDTRPDVNHSLQMHSSLVRRLSQERELEGHQGCVNAISWNSKGS 63
F H G++Y + + +T Q+ S+ ++ H G + ++S+++ G
Sbjct: 85 FVGHKGAVYCVKYSPDGETIASCGQDRQIRLWQNTVQSKCSIIKAHCGAIRSMSFSADGG 144
Query: 64 LLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPETSDELVVSGAGDAEVRLFN 123
L+S SDD + +W +K + S GH V P+ LV SG+ D V L++
Sbjct: 145 YLLSSSDDKTLKLWRLQDKKFMCSF-AGHKNWVRSGVISPDM--RLVASGSDDKTVMLWD 201
Query: 124 L------SRFSGRGLDDNA-ITPSALYQCHTRRVKKLAVEVGNPHVVWSASEDGTLRQHD 176
L S++S LDDN I+ Y H V ++ ++ S+S D ++ D
Sbjct: 202 LNFQKIVSKYST--LDDNVKISQINSYSDHMDTVSQVLFHPDGTCLI-SSSFDHKIKITD 258
Query: 177 FR 178
R
Sbjct: 259 IR 260
Score = 94 (38.1 bits), Expect = 0.00046, Sum P(3) = 0.00046
Identities = 27/131 (20%), Positives = 60/131 (45%)
Query: 44 RELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP 103
R GH+ + ++ K + S S D+ + VW++ ++ GH V+C K+ P
Sbjct: 41 RSFRGHEDIITCADFDPKMRQVASCSKDSIVYVWNFKPQQRPFKF-VGHKGAVYCVKYSP 99
Query: 104 ETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAI-TPSALYQCHTRRVKKLAVEVGNPHV 162
+ E + S D ++RL+ N + + ++ + H ++ ++ ++
Sbjct: 100 D--GETIASCGQDRQIRLWQ-----------NTVQSKCSIIKAHCGAIRSMSFSADGGYL 146
Query: 163 VWSASEDGTLR 173
+ S+S+D TL+
Sbjct: 147 L-SSSDDKTLK 156
Score = 81 (33.6 bits), Expect = 6.0e-06, Sum P(3) = 6.0e-06
Identities = 19/58 (32%), Positives = 32/58 (55%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW 696
G + S S D + I + ++ +LI+ +A VN + HP +A++G D+ IKIW
Sbjct: 242 GTCLISSSFDHKIKITDIRSNKLIQHYNAHDAQVNSISIHPTGYFLASAGSDSKIKIW 299
Score = 77 (32.2 bits), Expect = 1.5e-05, Sum P(3) = 1.5e-05
Identities = 20/86 (23%), Positives = 37/86 (43%)
Query: 612 VIDMKQ-RYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEA 670
+ D++ + + H N + + G ++AS D + IW+ + GR I L ++
Sbjct: 256 ITDIRSNKLIQHYNAHDAQVNSISIHPTGYFLASAGSDSKIKIWDLRQGRQIYTLYSNDK 315
Query: 671 VVNCVQCHPFDCVVATSGIDNTIKIW 696
+ VQ + AT G N +W
Sbjct: 316 DITTVQFNQSGDYFATGGSQNLCMVW 341
Score = 39 (18.8 bits), Expect = 6.0e-06, Sum P(3) = 6.0e-06
Identities = 10/26 (38%), Positives = 16/26 (61%)
Query: 730 SRNREHSLSYELLERFHMHEFSEGSL 755
S ++HSLS L +R ++ F G+L
Sbjct: 592 SNIQDHSLSASLNDRNVVNIFQAGAL 617
>RGD|1310631 [details] [associations]
symbol:Atg16l1 "autophagy related 16-like 1 (S. cerevisiae)"
species:10116 "Rattus norvegicus" [GO:0000421 "autophagic vacuole
membrane" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005776 "autophagic vacuole" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310631 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013923 Pfam:PF08614
IPI:IPI00766621 ProteinModelPortal:D3ZLV2
Ensembl:ENSRNOT00000056840 UCSC:RGD:1310631 ArrayExpress:D3ZLV2
Uniprot:D3ZLV2
Length = 605
Score = 113 (44.8 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
Identities = 24/79 (30%), Positives = 46/79 (58%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L G + +I ++S G+ L++ S+D +W+ +L H++ TGHS V KF+ +
Sbjct: 343 LSGSNAGITSIEFDSAGAYLLAASNDFASRIWTVDDYRLRHTL-TGHSGKVLSAKFLLDN 401
Query: 106 SDELVVSGAGDAEVRLFNL 124
+ +VSG+ D ++L++L
Sbjct: 402 AR--IVSGSHDRTLKLWDL 418
Score = 76 (31.8 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
Identities = 20/72 (27%), Positives = 34/72 (47%)
Query: 626 GTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAV-VNCVQCHPFDCVV 684
G+D + F G Y+A+GS DG ++W TG++ K+L + +N V P V
Sbjct: 532 GSDWTRVVF-SPDGSYVAAGSADGSLYVWSVLTGKVEKVLSKQHSSSINAVAWAPSGLHV 590
Query: 685 ATSGIDNTIKIW 696
+ + +W
Sbjct: 591 VSVDKGSRAVLW 602
>UNIPROTKB|E9PFC6 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:AC115284
CTD:25886 KO:K16482 RefSeq:NP_001155053.1 UniGene:Hs.476306
GeneID:25886 KEGG:hsa:25886 HGNC:HGNC:24488 GenomeRNAi:25886
NextBio:47308 EMBL:AC097637 IPI:IPI00936600
ProteinModelPortal:E9PFC6 SMR:E9PFC6 Ensembl:ENST00000474012
ArrayExpress:E9PFC6 Bgee:E9PFC6 Uniprot:E9PFC6
Length = 369
Score = 97 (39.2 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
Identities = 19/58 (32%), Positives = 28/58 (48%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW 696
G I S SDD +W+K + + V V HP +A +G+DNT+K+W
Sbjct: 119 GRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVW 176
Score = 87 (35.7 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
Identities = 27/93 (29%), Positives = 45/93 (48%)
Query: 41 SQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANV---- 96
S+ GH+ V ++++ G LL SGS D + +W + K ++ H+A V
Sbjct: 14 SRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVH 72
Query: 97 FCT---KFVPETSDELVVSGAGDAEVRLFNLSR 126
FC+ FV + D+ V A + LF+LS+
Sbjct: 73 FCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQ 105
Score = 76 (31.8 bits), Expect = 0.00097, Sum P(2) = 0.00097
Identities = 21/74 (28%), Positives = 34/74 (45%)
Query: 622 HCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFD 681
+C G + F G IA+ D +W+ +T RL++ A VN + HP
Sbjct: 145 YCEHGGFVTYVDF-HPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSG 203
Query: 682 CVVATSGIDNTIKI 695
+ T+ D+T+KI
Sbjct: 204 NYLITASSDSTLKI 217
>TAIR|locus:2172432 [details] [associations]
symbol:AT5G43920 "AT5G43920" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 EMBL:AB006703
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
HOGENOM:HOG000160946 EMBL:EF601122 EMBL:AK227235 IPI:IPI00548878
RefSeq:NP_199205.1 UniGene:At.26347 ProteinModelPortal:Q9FND4
SMR:Q9FND4 STRING:Q9FND4 PRIDE:Q9FND4 ProMEX:Q9FND4
EnsemblPlants:AT5G43920.1 GeneID:834414 KEGG:ath:AT5G43920
TAIR:At5g43920 InParanoid:Q9FND4 OMA:SSCAWFP PhylomeDB:Q9FND4
ProtClustDB:CLSN2686863 Genevestigator:Q9FND4 Uniprot:Q9FND4
Length = 523
Score = 119 (46.9 bits), Expect = 6.1e-06, Sum P(2) = 6.1e-06
Identities = 26/82 (31%), Positives = 47/82 (57%)
Query: 618 RYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQC 677
++ GH + ++ F G +IASGS+D + +IW + + +++L G VNCV
Sbjct: 435 KFSGH-RQSKYVIRSCFGGLDSSFIASGSEDSQVYIWNLKNTKPLEVLSGHSMTVNCVSW 493
Query: 678 HPFDC-VVATSGIDNTIKIWTP 698
+P + ++A++ D TI+IW P
Sbjct: 494 NPKNPRMLASASDDQTIRIWGP 515
Score = 68 (29.0 bits), Expect = 6.1e-06, Sum P(2) = 6.1e-06
Identities = 20/83 (24%), Positives = 41/83 (49%)
Query: 39 RLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSI---ETGHSAN 95
++ + LE HQ V+ +SW+ + L++ + + +W + L H+ TG + +
Sbjct: 258 KVELKHTLESHQNPVSFVSWSPDDTKLLTCGNAEVLKLWDVDTGVLRHTFGNNNTGFTVS 317
Query: 96 VFCTKFVPETSDELVVSGAGDAE 118
C F P+++ +V G+ D E
Sbjct: 318 S-CAWF-PDSTR--LVCGSSDPE 336
Score = 55 (24.4 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 20/77 (25%), Positives = 36/77 (46%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSY---SSRKLLHSIETGHSANVFCTKFV 102
L H+ V + +++ G L + S D +W + +L H++E+ H V FV
Sbjct: 220 LVAHKNEVWFVQFSNSGKYLATASSDCTAIIWKVLDDNKVELKHTLES-HQNPV---SFV 275
Query: 103 PETSDELVVSGAGDAEV 119
+ D+ + G+AEV
Sbjct: 276 SWSPDDTKLLTCGNAEV 292
>POMBASE|SPAC4D7.03 [details] [associations]
symbol:pop2 "F-box/WD repeat protein Pop2" species:4896
"Schizosaccharomyces pombe" [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IC]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA]
[GO:0030674 "protein binding, bridging" evidence=IPI] [GO:0032876
"negative regulation of DNA endoreduplication" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
PomBase:SPAC4D7.03 GO:GO:0007346 GO:GO:0005737 GO:GO:0005635
EMBL:CU329670 GenomeReviews:CU329670_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0006511
GO:GO:0019005 GO:GO:0032876 KO:K03361 OrthoDB:EOG4B2X5M
EMBL:AF038867 EMBL:AF064515 PIR:T43557 RefSeq:NP_594956.1
ProteinModelPortal:O14170 IntAct:O14170 STRING:O14170
EnsemblFungi:SPAC4D7.03.1 GeneID:2543514 KEGG:spo:SPAC4D7.03
OMA:RIANMEC NextBio:20804524 Uniprot:O14170
Length = 703
Score = 118 (46.6 bits), Expect = 6.6e-06, Sum P(2) = 6.6e-06
Identities = 27/80 (33%), Positives = 46/80 (57%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L GH V IS G +L+SGS D+ I +W S+ + L+ + GHS ++ + PE
Sbjct: 503 LIGHTDSVRTIS--GYGDILVSGSYDSSIRIWRVSTGECLYHLR-GHSLRIYSVLYEPER 559
Query: 106 SDELVVSGAGDAEVRLFNLS 125
+ + +SG+ D +R+++LS
Sbjct: 560 N--ICISGSMDKSIRVWDLS 577
Score = 92 (37.4 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 32/110 (29%), Positives = 54/110 (49%)
Query: 29 SLQMHSSLVRRLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSI 88
++Q+H+++ L E LEGH+ V A+ + + L+SGS D + VW+ K H I
Sbjct: 372 TIQIHNAITGVL--EARLEGHKEGVWAVKIHE--NTLVSGSIDKTVRVWNIEKAKCTH-I 426
Query: 89 ETGHSANVFCTKF-VP-----------ETSDELVVSGAGDAEVRLFNLSR 126
GH + + C + VP E +VSG+ D +R++ L +
Sbjct: 427 FRGHISIIRCLEILVPSRLIRHGVEIVEPDQPYIVSGSRDHTLRVWKLPK 476
Score = 92 (37.4 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 31/113 (27%), Positives = 44/113 (38%)
Query: 601 QNDRIPYQPETV--IDM--KQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEK 656
+N PY P+ ID K Y H +G + G GD + SGS D IW
Sbjct: 476 KNTDPPYLPDNTNSIDRWEKNPYFVHTLIGHTDSVRTISGY-GDILVSGSYDSSIRIWRV 534
Query: 657 QTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIWTPSASVPSIVSGG 709
TG + L G + V P + + +D +I++W S V G
Sbjct: 535 STGECLYHLRGHSLRIYSVLYEPERNICISGSMDKSIRVWDLSTGTCKYVLEG 587
Score = 72 (30.4 bits), Expect = 6.6e-06, Sum P(2) = 6.6e-06
Identities = 23/94 (24%), Positives = 42/94 (44%)
Query: 644 SGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIWTPSASVP 703
SGS D +W+ TG +L G +A V + F + + D+TI+IW + P
Sbjct: 564 SGSMDKSIRVWDLSTGTCKYVLEGHDAFVTLLNV--FQNRLISGSADSTIRIWDLNTGKP 621
Query: 704 SIVSGGAAGPDTADVLEAMESNQRKLSRNREHSL 737
+V P + + + S++ K+ + S+
Sbjct: 622 LMVL-----PSNSGYISSFVSDEHKIISGNDGSV 650
Score = 66 (28.3 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 20/63 (31%), Positives = 31/63 (49%)
Query: 642 IASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNT-IKIWTPSA 700
I SG+D G +W+ +TG+L++ LL D + V CV A D +++ S
Sbjct: 642 IISGND-GSVKLWDVRTGKLLRFLLTDLTKIWHVDFDAMRCVAAVQRDDQAYLEVINFSG 700
Query: 701 SVP 703
S P
Sbjct: 701 SRP 703
Score = 59 (25.8 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 14/55 (25%), Positives = 26/55 (47%)
Query: 642 IASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW 696
+ SGS D IW+ TG+ + +L + ++ + SG D ++K+W
Sbjct: 602 LISGSADSTIRIWDLNTGKPLMVLPSNSGYISSFVSDEHKII---SGNDGSVKLW 653
>DICTYBASE|DDB_G0278353 [details] [associations]
symbol:smu1 "suppressor of mec-8 and unc-52-like
protein" species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
dictyBase:DDB_G0278353 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR EMBL:AAFI02000023
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 HSSP:P26449
PROSITE:PS50897 KO:K13111 OMA:NGHWDTV RefSeq:XP_642306.2
ProteinModelPortal:Q54Y96 EnsemblProtists:DDB0233537 GeneID:8621512
KEGG:ddi:DDB_G0278353 ProtClustDB:CLSZ2430773 Uniprot:Q54Y96
Length = 530
Score = 113 (44.8 bits), Expect = 6.7e-06, Sum P(2) = 6.7e-06
Identities = 35/135 (25%), Positives = 59/135 (43%)
Query: 49 HQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPETSDE 108
H + I+++ G L +GS D I VW S K L E H+ V C +F ++
Sbjct: 274 HDDAILCIAFSKDGEFLATGSLDNKIKVWQIKSGKCLRKFEPAHTNGVTCLQFSRNSTQ- 332
Query: 109 LVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHVVWSASE 168
++SG+ D+ +++ L SG+ L +++ H V V+ S S
Sbjct: 333 -ILSGSFDSSLKIHGLK--SGKALK--------IFRGHQSFVNDCCFNHDEDRVI-SCSS 380
Query: 169 DGTLRQHDFRQGSSC 183
DG ++ D + S C
Sbjct: 381 DGKIKIWDAKS-SDC 394
Score = 74 (31.1 bits), Expect = 6.7e-06, Sum P(2) = 6.7e-06
Identities = 20/94 (21%), Positives = 47/94 (50%)
Query: 611 TVIDMKQRYVGHCNVGTDIKQ--ASFLGQRGDYIASGSDDGRWFIWEKQTGRLI-KMLLG 667
+++ MK + + + K L +Y+ + +D + ++ +G L+ K +
Sbjct: 433 SIVSMKSQTISKTFTSENSKTFLVCTLSPLQNYLYAVDEDNILYTFDFNSGSLLNKFKIH 492
Query: 668 DEAVVNCVQCHPFDCVVATSGIDNTIKIWTPSAS 701
D+ V++ + HP ++AT+G D +KIW +++
Sbjct: 493 DQEVIS-ISHHPTKNLLATTGSDCLLKIWKSNSN 525
>DICTYBASE|DDB_G0284621 [details] [associations]
symbol:pwp2 "periodic tryptophan protein"
species:44689 "Dictyostelium discoideum" [GO:0030515 "snoRNA
binding" evidence=ISS] [GO:0006364 "rRNA processing" evidence=ISS]
[GO:0005829 "cytosol" evidence=ISS] [GO:0005730 "nucleolus"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0284621 GO:GO:0005829 GO:GO:0005730
GenomeReviews:CM000153_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030515 eggNOG:COG2319
InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0006364 HSSP:P16649
EMBL:AAFI02000070 KO:K14558 InterPro:IPR027145 InterPro:IPR007148
PANTHER:PTHR19858 Pfam:PF04003 RefSeq:XP_638435.1
ProteinModelPortal:Q54PE0 STRING:Q54PE0 EnsemblProtists:DDB0235358
GeneID:8624685 KEGG:ddi:DDB_G0284621 OMA:HEAPIAC
ProtClustDB:CLSZ2430232 Uniprot:Q54PE0
Length = 922
Score = 105 (42.0 bits), Expect = 6.9e-06, Sum P(2) = 6.9e-06
Identities = 21/81 (25%), Positives = 41/81 (50%)
Query: 47 EGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPETS 106
+GH +N ++++ G + +G +D + +W+ +S + T H V K+ P +S
Sbjct: 355 QGHSYNMNTVAYSPDGQTIATGGEDGKVKIWNTTSGYCYITF-TEHEGPVTAVKYSPVSS 413
Query: 107 DELVVSGAGDAEVRLFNLSRF 127
+V S D +R F+L R+
Sbjct: 414 QNVVFSAGVDGTIRAFDLVRY 434
Score = 88 (36.0 bits), Expect = 6.9e-06, Sum P(2) = 6.9e-06
Identities = 20/59 (33%), Positives = 34/59 (57%)
Query: 639 GDYIASGS-DDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW 696
G+ IA+GS D ++W +TGRL +L G ++ V + P + +A++ D + KIW
Sbjct: 457 GEIIAAGSLDSFEIYVWSVRTGRLTDILSGHQSPVCELAFDPINPFLASASWDKSCKIW 515
>FB|FBgn0031229 [details] [associations]
symbol:CG3436 species:7227 "Drosophila melanogaster"
[GO:0005682 "U5 snRNP" evidence=ISS] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=IC;ISS] [GO:0030532 "small nuclear
ribonucleoprotein complex" evidence=ISS] [GO:0007067 "mitosis"
evidence=IMP] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007067 EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005682 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 UniGene:Dm.1591 GeneID:33180
KEGG:dme:Dmel_CG3436 FlyBase:FBgn0031229 GenomeRNAi:33180
NextBio:782301 EMBL:AY070530 RefSeq:NP_608501.1 SMR:Q9VPL0
STRING:Q9VPL0 EnsemblMetazoa:FBtr0078119 UCSC:CG3436-RA
InParanoid:Q9VPL0 Uniprot:Q9VPL0
Length = 347
Score = 118 (46.6 bits), Expect = 9.3e-05, Sum P(2) = 9.3e-05
Identities = 43/165 (26%), Positives = 75/165 (45%)
Query: 42 QERELEGHQGCVNAISWNSKGS-LLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTK 100
++R +GH VN++ + +G LL SGSDD I +W + H++E+ C
Sbjct: 132 RQRRFKGHGNFVNSVQGSRRGQQLLCSGSDDRTIKIWDARKKHAAHTLESPFQVTAVC-- 189
Query: 101 FVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNP 160
F +T ++ V+SG D EV+++++ + A+ + H+ + +++
Sbjct: 190 F-GDTGEQ-VISGGIDNEVKIWDIRK--------QAVLHHL--RGHSDTITGMSLSPEGD 237
Query: 161 HVVWSASEDGTLRQHDFRQ---GSSCPPAGSSHQECRNILLDLRC 202
++ +A D TLR D R G C HQ L LRC
Sbjct: 238 FILTNAM-DNTLRVWDVRPYAPGERCVKVFQGHQHNFEKNL-LRC 280
Score = 90 (36.7 bits), Expect = 7.9e-06, Sum P(3) = 7.9e-06
Identities = 33/125 (26%), Positives = 59/125 (47%)
Query: 27 NHSLQMHSSLVRRLSQER----ELEGHQGCVNAISWNSKGSLLISGSDDTHINVWS-YSS 81
N + S VRR S + +LEGH+G + ++ +G LL+S D I +W Y
Sbjct: 28 NRDKALLESGVRRTSNLQAPIMQLEGHEGEIFTAEFHPEGELLLSSGFDRQIYIWQVYED 87
Query: 82 RKLLHSIETGHSANVFCTKFVPETSDELVVSGAGDAEVRLFNLS------RFSGRGLDDN 135
+ + ++ +GHS V F P+ S + + + D + ++++ RF G G N
Sbjct: 88 CENVMAM-SGHSGAVMEAHFTPDGSH--IFTCSTDKTLAFWDIATGQRQRRFKGHGNFVN 144
Query: 136 AITPS 140
++ S
Sbjct: 145 SVQGS 149
Score = 83 (34.3 bits), Expect = 7.9e-06, Sum P(3) = 7.9e-06
Identities = 26/90 (28%), Positives = 42/90 (46%)
Query: 606 PYQP-ETVIDMKQRYVGHC-NVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIK 663
PY P E + + Q GH N ++ + ++ D I SGS D +IW+ T R++
Sbjct: 255 PYAPGERCVKVFQ---GHQHNFEKNLLRCAW-SPGSDKITSGSADRHVYIWDVNTRRILY 310
Query: 664 MLLGDEAVVNCVQCHPFDCVVATSGIDNTI 693
L G VN V P + ++ + D T+
Sbjct: 311 KLPGHNGSVNAVDFSPKEPLILSGSSDKTL 340
Score = 83 (34.3 bits), Expect = 7.5e-05, Sum P(2) = 7.5e-05
Identities = 18/83 (21%), Positives = 36/83 (43%)
Query: 614 DMKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVN 673
D ++++ H A G G+ + SG D IW+ + ++ L G +
Sbjct: 169 DARKKHAAHTLESPFQVTAVCFGDTGEQVISGGIDNEVKIWDIRKQAVLHHLRGHSDTIT 228
Query: 674 CVQCHPFDCVVATSGIDNTIKIW 696
+ P + T+ +DNT+++W
Sbjct: 229 GMSLSPEGDFILTNAMDNTLRVW 251
Score = 80 (33.2 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 40/158 (25%), Positives = 66/158 (41%)
Query: 616 KQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCV 675
++R+ GH N + Q S GQ+ + SGSDD IW+ + L V
Sbjct: 133 QRRFKGHGNFVNSV-QGSRRGQQ--LLCSGSDDRTIKIWDARKKHAAHTLESPFQVTAVC 189
Query: 676 QCHPFDCVVATSGIDNTIKIWT--PSASVPSI------VSGGAAGPDTADVLEAMESNQR 727
+ V++ GIDN +KIW A + + ++G + P+ +L N
Sbjct: 190 FGDTGEQVIS-GGIDNEVKIWDIRKQAVLHHLRGHSDTITGMSLSPEGDFILTNAMDNTL 248
Query: 728 KLSRNREHSLSYELLERF--HMHEFSEGSLRPFECAQS 763
++ R ++ ++ F H H F + LR CA S
Sbjct: 249 RVWDVRPYAPGERCVKVFQGHQHNFEKNLLR---CAWS 283
Score = 52 (23.4 bits), Expect = 9.3e-05, Sum P(2) = 9.3e-05
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 281 HLTHVTFSPNGEEVLLSYSGEHVYLMDVN 309
+L +SP +++ + HVY+ DVN
Sbjct: 276 NLLRCAWSPGSDKITSGSADRHVYIWDVN 304
Score = 49 (22.3 bits), Expect = 7.9e-06, Sum P(3) = 7.9e-06
Identities = 19/79 (24%), Positives = 31/79 (39%)
Query: 271 HLSEHGRSSLHLTHVTFSPNGEEVLLSYSGEHVYLMDVNHAGGRAMRYTVGDASKIMSFT 330
H + S +T V F GE+V+ V + D+ + + G +
Sbjct: 174 HAAHTLESPFQVTAVCFGDTGEQVISGGIDNEVKIWDIRKQA--VLHHLRGHSD------ 225
Query: 331 PTLNGLELQPPIHDFLQTN 349
T+ G+ L P DF+ TN
Sbjct: 226 -TITGMSLSPE-GDFILTN 242
>TAIR|locus:2089179 [details] [associations]
symbol:AT3G27640 "AT3G27640" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0006261 "DNA-dependent DNA
replication" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0080008 KO:K11790 EMBL:AY035167 EMBL:AY063003 IPI:IPI00539568
RefSeq:NP_566822.1 UniGene:At.19178 ProteinModelPortal:Q94C55
SMR:Q94C55 PRIDE:Q94C55 EnsemblPlants:AT3G27640.1 GeneID:822386
KEGG:ath:AT3G27640 TAIR:At3g27640 InParanoid:Q94C55 OMA:NRIYLYN
PhylomeDB:Q94C55 ProtClustDB:CLSN2688846 ArrayExpress:Q94C55
Genevestigator:Q94C55 Uniprot:Q94C55
Length = 535
Score = 99 (39.9 bits), Expect = 8.1e-06, Sum P(2) = 8.1e-06
Identities = 30/122 (24%), Positives = 59/122 (48%)
Query: 617 QRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLL-GDEAVVNCV 675
Q + G C + + + + + G+Y+ SGS DG +IW+ ++ ++L G + V V
Sbjct: 330 QSFSG-CRIDSFFVR-TMISPDGEYVLSGSSDGNAYIWQVNKPQVDPIILKGHDFEVTAV 387
Query: 676 QCHPFDC-VVATSGIDNTIKIWTPSASVPSIVSGGAAGPDTADVLEAMESNQRK--LSRN 732
P + VAT+ D T+++W ++ + + A+ + A+ + + K L N
Sbjct: 388 DWSPSEIGKVATASDDFTVRLWNIENNICTNANATASVSRVKRRVTALSNTEAKERLEMN 447
Query: 733 RE 734
RE
Sbjct: 448 RE 449
Score = 88 (36.0 bits), Expect = 8.1e-06, Sum P(2) = 8.1e-06
Identities = 26/81 (32%), Positives = 36/81 (44%)
Query: 44 RELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP 103
R+ H + ISW S L++ S D I VW K + GH+ V P
Sbjct: 122 RDWIAHYNAIFDISWIKGDSCLLTASGDQTIKVWDVEENKCT-GVLIGHTGTVKSMCSHP 180
Query: 104 ETSDELVVSGAGDAEVRLFNL 124
SD L+VSG+ D L++L
Sbjct: 181 TNSD-LLVSGSRDGCFALWDL 200
>UNIPROTKB|F1MNS4 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9913
"Bos taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 IPI:IPI00711976 UniGene:Bt.20483 OMA:HHFRGSP
GeneTree:ENSGT00690000102183 EMBL:DAAA02057306
ProteinModelPortal:F1MNS4 Ensembl:ENSBTAT00000027147 Uniprot:F1MNS4
Length = 800
Score = 100 (40.3 bits), Expect = 8.3e-06, Sum P(2) = 8.3e-06
Identities = 36/137 (26%), Positives = 58/137 (42%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETG----HSANVFCTKF 101
L GH V A+ KG L S + D I VW + + + G HS C
Sbjct: 372 LHGHTDIVLALDVFRKGRLFASCAKDQSIRVWRMNKSGEVACVAQGSGHTHSVGTICCSR 431
Query: 102 VPETSDELVVSGAGDAEVRLFNLSRF---SGRGLDDNAI--TPSALYQCHTRRVKKLAVE 156
+ ET +V+G+ D V+L+ L G G + + A +CH + + +AV
Sbjct: 432 LKET---FLVTGSQDCTVKLWPLPEALLSKGTGHEGGPVFLQAQATQRCHDKDINSVAV- 487
Query: 157 VGNPHVVWSASEDGTLR 173
N ++ + S+D T +
Sbjct: 488 APNDKLLATGSQDRTAK 504
Score = 91 (37.1 bits), Expect = 8.3e-06, Sum P(2) = 8.3e-06
Identities = 20/55 (36%), Positives = 29/55 (52%)
Query: 642 IASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW 696
+A+GS D +W +L+ G + CVQ P D V+AT+ D TIK+W
Sbjct: 494 LATGSQDRTAKLWALPRCQLLGTFSGHRRGLWCVQFSPMDQVLATASADGTIKLW 548
>GENEDB_PFALCIPARUM|PF08_0019 [details] [associations]
symbol:PF08_0019 "receptor for activated C
kinase homolog, PfRACK" species:5833 "Plasmodium falciparum"
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=ISS] [GO:0005080 "protein kinase C binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 118 (46.6 bits), Expect = 8.6e-06, Sum P(2) = 8.6e-06
Identities = 25/81 (30%), Positives = 44/81 (54%)
Query: 43 ERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFV 102
++ L GH +N +S +S G +SGS D + +W S + + S GH+++VF F
Sbjct: 65 KKSLTGHSQAINDVSISSDGLFALSGSWDHSVRLWDLSLGETIRSF-IGHTSDVFSVSFS 123
Query: 103 PETSDELVVSGAGDAEVRLFN 123
P+ +VS + D ++L+N
Sbjct: 124 PDNRQ--IVSASRDKTIKLWN 142
Score = 61 (26.5 bits), Expect = 8.6e-06, Sum P(2) = 8.6e-06
Identities = 14/44 (31%), Positives = 20/44 (45%)
Query: 653 IWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW 696
+W + L K L G V+N V P + A+ G D K+W
Sbjct: 185 VWNLKNCDLNKNLEGHTGVLNTVTISPDGSLCASGGKDGVAKLW 228
Score = 60 (26.2 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 21/84 (25%), Positives = 36/84 (42%)
Query: 614 DMKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGR-LIKMLLGDEAVV 672
D+ + GH T + + G ASG DG +W+ + G+ L + G + +
Sbjct: 192 DLNKNLEGH----TGVLNTVTISPDGSLCASGGKDGVAKLWDVKEGKHLYSLETG--STI 245
Query: 673 NCVQCHPFDCVVATSGIDNTIKIW 696
N + P D + + D I+IW
Sbjct: 246 NSLCFSPCDYWLCAA-TDRFIRIW 268
>UNIPROTKB|Q8IBA0 [details] [associations]
symbol:PfRACK "Receptor for activated C kinase homolog,
PfRACK" species:36329 "Plasmodium falciparum 3D7" [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 118 (46.6 bits), Expect = 8.6e-06, Sum P(2) = 8.6e-06
Identities = 25/81 (30%), Positives = 44/81 (54%)
Query: 43 ERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFV 102
++ L GH +N +S +S G +SGS D + +W S + + S GH+++VF F
Sbjct: 65 KKSLTGHSQAINDVSISSDGLFALSGSWDHSVRLWDLSLGETIRSF-IGHTSDVFSVSFS 123
Query: 103 PETSDELVVSGAGDAEVRLFN 123
P+ +VS + D ++L+N
Sbjct: 124 PDNRQ--IVSASRDKTIKLWN 142
Score = 61 (26.5 bits), Expect = 8.6e-06, Sum P(2) = 8.6e-06
Identities = 14/44 (31%), Positives = 20/44 (45%)
Query: 653 IWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW 696
+W + L K L G V+N V P + A+ G D K+W
Sbjct: 185 VWNLKNCDLNKNLEGHTGVLNTVTISPDGSLCASGGKDGVAKLW 228
Score = 60 (26.2 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 21/84 (25%), Positives = 36/84 (42%)
Query: 614 DMKQRYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGR-LIKMLLGDEAVV 672
D+ + GH T + + G ASG DG +W+ + G+ L + G + +
Sbjct: 192 DLNKNLEGH----TGVLNTVTISPDGSLCASGGKDGVAKLWDVKEGKHLYSLETG--STI 245
Query: 673 NCVQCHPFDCVVATSGIDNTIKIW 696
N + P D + + D I+IW
Sbjct: 246 NSLCFSPCDYWLCAA-TDRFIRIW 268
>UNIPROTKB|G3V1X0 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 KO:K16482 CTD:282809
UniGene:Hs.604487 GeneID:282809 KEGG:hsa:282809 HGNC:HGNC:30836
ChiTaRS:POC1B GenomeRNAi:282809 NextBio:93521 RefSeq:NP_001186706.1
ProteinModelPortal:G3V1X0 SMR:G3V1X0 Ensembl:ENST00000549035
ArrayExpress:G3V1X0 Bgee:G3V1X0 Uniprot:G3V1X0
Length = 436
Score = 105 (42.0 bits), Expect = 8.7e-06, Sum P(2) = 8.7e-06
Identities = 23/79 (29%), Positives = 44/79 (55%)
Query: 45 ELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPE 104
E + H V ++ +++ G L + S+D I VWS ++ L+S+ H+ V C KF P+
Sbjct: 55 EFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYR-HTHWVRCAKFSPD 113
Query: 105 TSDELVVSGAGDAEVRLFN 123
L+VS + D +++++
Sbjct: 114 --GRLIVSCSEDKTIKIWD 130
Score = 79 (32.9 bits), Expect = 8.7e-06, Sum P(2) = 8.7e-06
Identities = 20/74 (27%), Positives = 33/74 (44%)
Query: 624 NVGTDIKQASFL--GQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFD 681
N + A+F+ G IAS D +W+ + +L++ VNC+ HP
Sbjct: 139 NFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSG 198
Query: 682 CVVATSGIDNTIKI 695
+ T+ D T+KI
Sbjct: 199 NYLITASSDGTLKI 212
Score = 66 (28.3 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 18/58 (31%), Positives = 26/58 (44%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW 696
G+Y+ + S DG I + GRLI L G V V + A+ G D + +W
Sbjct: 198 GNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLW 255
>UNIPROTKB|F1SM42 [details] [associations]
symbol:ATG16L1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0000421 "autophagic vacuole membrane" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00700000104505 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000421 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE EMBL:FP102656 Ensembl:ENSSSCT00000017750 Uniprot:F1SM42
Length = 596
Score = 117 (46.2 bits), Expect = 8.8e-06, Sum P(2) = 8.8e-06
Identities = 31/108 (28%), Positives = 56/108 (51%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L G + +I ++S GS L++ S+D +W+ +L H++ TGHS V KF+ +
Sbjct: 362 LSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTL-TGHSGKVLSAKFLLDN 420
Query: 106 SDELVVSGAGDAEVRLFNL-SR------FSGRGLDDNAITPSALYQCH 146
+ +VSG+ D ++L++L S+ F+G +D T + H
Sbjct: 421 AR--IVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCVMSGH 466
Score = 70 (29.7 bits), Expect = 8.8e-06, Sum P(2) = 8.8e-06
Identities = 18/62 (29%), Positives = 32/62 (51%)
Query: 626 GTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAV-VNCVQCHPFDCVV 684
G+D + F G Y+A+GS +G ++W +G++ K+L + +N V P V
Sbjct: 536 GSDWTRVVF-SPDGSYVAAGSAEGSLYVWSVLSGKVEKVLSKHHSSPINAVAWSPSGAHV 594
Query: 685 AT 686
A+
Sbjct: 595 AS 596
>SGD|S000000680 [details] [associations]
symbol:TUP1 "General repressor of transcription" species:4932
"Saccharomyces cerevisiae" [GO:0001191 "RNA polymerase II
transcription factor binding transcription factor activity involved
in negative regulation of transcription" evidence=IMP;IDA;IPI]
[GO:0017053 "transcriptional repressor complex" evidence=IDA]
[GO:0001198 "negative regulation of mating-type specific
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0000433 "negative regulation of transcription from RNA
polymerase II promoter by glucose" evidence=IMP] [GO:2000531
"regulation of fatty acid biosynthetic process by regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0043130 "ubiquitin binding" evidence=IDA] [GO:0036033 "mediator
complex binding" evidence=IDA;IPI] [GO:0042826 "histone deacetylase
binding" evidence=IDA;IPI] [GO:0043486 "histone exchange"
evidence=IMP] [GO:0061418 "regulation of transcription from RNA
polymerase II promoter in response to hypoxia" evidence=IMP]
[GO:0061392 "regulation of transcription from RNA polymerase II
promoter in response to osmotic stress" evidence=IMP] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IMP] [GO:0042393 "histone
binding" evidence=IDA;IPI] [GO:0080025
"phosphatidylinositol-3,5-bisphosphate binding" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA;IPI] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0035955 "negative regulation of dipeptide transport by negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:2001020 "regulation of response to DNA damage
stimulus" evidence=IMP] [GO:0016584 "nucleosome positioning"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000000680 GO:GO:0017053 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GO:GO:2001020 GO:GO:0043486 GO:GO:0042393 GO:GO:0042826
GO:GO:0061418 GO:GO:0016584 GO:GO:0043130 GO:GO:0080025
GO:GO:0001191 GO:GO:0035955 GO:GO:0000433 GO:GO:0007070
GO:GO:2000531 GO:GO:0061392 GeneTree:ENSGT00700000104507
GO:GO:0001198 GO:GO:0036033 HOGENOM:HOG000200558 KO:K06666
OrthoDB:EOG4KM2C2 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
EMBL:M31733 EMBL:M35861 EMBL:X16365 PIR:JN0133 RefSeq:NP_010007.1
PDB:1ERJ PDB:3VP8 PDB:3VP9 PDBsum:1ERJ PDBsum:3VP8 PDBsum:3VP9
ProteinModelPortal:P16649 SMR:P16649 DIP:DIP-512N IntAct:P16649
MINT:MINT-648551 STRING:P16649 PaxDb:P16649 PeptideAtlas:P16649
EnsemblFungi:YCR084C GeneID:850445 KEGG:sce:YCR084C CYGD:YCR084c
OMA:TISESCI EvolutionaryTrace:P16649 NextBio:966057
Genevestigator:P16649 GermOnline:YCR084C Uniprot:P16649
Length = 713
Score = 111 (44.1 bits), Expect = 9.2e-06, Sum P(2) = 9.2e-06
Identities = 21/72 (29%), Positives = 45/72 (62%)
Query: 53 VNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPETSDELVVS 112
+ ++ ++ G L +G++D I +W +RK++ ++ GH +++ + P + D+LV S
Sbjct: 446 IRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQ-GHEQDIYSLDYFP-SGDKLV-S 502
Query: 113 GAGDAEVRLFNL 124
G+GD VR+++L
Sbjct: 503 GSGDRTVRIWDL 514
Score = 78 (32.5 bits), Expect = 9.2e-06, Sum P(2) = 9.2e-06
Identities = 28/92 (30%), Positives = 37/92 (40%)
Query: 619 YVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDE------AVV 672
Y+GH D + Q +YI SGS D W+K++G + ML G AV
Sbjct: 626 YIGH----KDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVA 681
Query: 673 NCVQCHPFDCVVATSGIDNTIKIWTPSASVPS 704
N P V AT D +IW P+
Sbjct: 682 NGSPLGPEYNVFATGSGDCKARIWKYKKIAPN 713
Score = 69 (29.3 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 20/66 (30%), Positives = 35/66 (53%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGD--------EAVVNCVQCHPFDCVVATSGID 690
G YIA+GS D +W+ +TG L++ L + ++V + V VV+ S +D
Sbjct: 539 GKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGS-LD 597
Query: 691 NTIKIW 696
++K+W
Sbjct: 598 RSVKLW 603
>UNIPROTKB|F1P8S8 [details] [associations]
symbol:POC1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=IEA] [GO:0005814
"centriole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OMA:TASWDTF EMBL:AAEX03009913
Ensembl:ENSCAFT00000015651 Uniprot:F1P8S8
Length = 478
Score = 102 (41.0 bits), Expect = 9.3e-06, Sum P(2) = 9.3e-06
Identities = 22/79 (27%), Positives = 44/79 (55%)
Query: 45 ELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPE 104
E + H V ++ +++ G L + S+D I VW+ ++ L+S+ H+ V C KF P+
Sbjct: 97 EFKAHTAPVRSVDFSADGQFLATASEDKSIKVWNMYRQRFLYSLYR-HTHWVRCAKFSPD 155
Query: 105 TSDELVVSGAGDAEVRLFN 123
L+VS + D +++++
Sbjct: 156 --GRLIVSCSEDKTIKIWD 172
Score = 84 (34.6 bits), Expect = 0.00079, Sum P(2) = 0.00079
Identities = 33/138 (23%), Positives = 62/138 (44%)
Query: 43 ERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFV 102
ER +GH+ + ++ ++ G L + S DT + +W+ + GH V +F
Sbjct: 11 ERYFKGHKAAITSVDFSPSGKQLATASWDTFLMLWNCKPQARAFRY-VGHKDVVTSVQFS 69
Query: 103 PETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHV 162
P L+ S + D VRL+ + RG S+ ++ HT V+ + +
Sbjct: 70 P--LGNLLASASRDRTVRLWIPDK---RG-------KSSEFKAHTAPVRSVDFSADGQFL 117
Query: 163 VWSASEDGTLRQHD-FRQ 179
+ASED +++ + +RQ
Sbjct: 118 A-TASEDKSIKVWNMYRQ 134
Score = 83 (34.3 bits), Expect = 9.3e-06, Sum P(2) = 9.3e-06
Identities = 22/74 (29%), Positives = 33/74 (44%)
Query: 624 NVGTDIKQASFL--GQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFD 681
N + A+F+ G IAS D IW+ + +L++ VNCV HP
Sbjct: 181 NFSDSVGFANFVDFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSG 240
Query: 682 CVVATSGIDNTIKI 695
+ T+ D T+KI
Sbjct: 241 NYIITASSDGTLKI 254
>UNIPROTKB|E2R5F8 [details] [associations]
symbol:ATG16L1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0000421 "autophagic vacuole membrane"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00700000104505 InterPro:IPR020472
PRINTS:PR00320 CTD:55054 GO:GO:0000421 InterPro:IPR013923
Pfam:PF08614 OMA:LETECQE EMBL:AAEX03014453 RefSeq:XP_850664.1
ProteinModelPortal:E2R5F8 Ensembl:ENSCAFT00000018720 GeneID:477412
KEGG:cfa:477412 NextBio:20852897 Uniprot:E2R5F8
Length = 607
Score = 117 (46.2 bits), Expect = 9.3e-06, Sum P(2) = 9.3e-06
Identities = 31/108 (28%), Positives = 56/108 (51%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L G + +I ++S GS L++ S+D +W+ +L H++ TGHS V KF+ +
Sbjct: 362 LSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTL-TGHSGKVLSAKFLLDN 420
Query: 106 SDELVVSGAGDAEVRLFNL-SR------FSGRGLDDNAITPSALYQCH 146
+ +VSG+ D ++L++L S+ F+G +D T + H
Sbjct: 421 AR--IVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCVMSGH 466
Score = 70 (29.7 bits), Expect = 9.3e-06, Sum P(2) = 9.3e-06
Identities = 19/73 (26%), Positives = 35/73 (47%)
Query: 626 GTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDE-AVVNCVQCHPFDCVV 684
G+D + F G Y+A+GS +G +IW +G++ K+L + +N V P V
Sbjct: 534 GSDWTRVVF-SPDGGYVAAGSAEGSLYIWSVLSGKVEKVLSKQHGSSINAVAWSPSGSHV 592
Query: 685 ATSGIDNTIKIWT 697
+ + +W+
Sbjct: 593 VSVDKGSKAVLWS 605
>UNIPROTKB|H9L3L2 [details] [associations]
symbol:LOC100859596 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006886 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030126 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 EMBL:AADN02074020 EMBL:AADN02074019
Ensembl:ENSGALT00000040760 Uniprot:H9L3L2
Length = 1134
Score = 127 (49.8 bits), Expect = 0.00041, P = 0.00041
Identities = 28/86 (32%), Positives = 49/86 (56%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIET--GHSANVFCTKFVP 103
LEGH VN +++ L++SG+DD + +W + K ++T GH NV C F P
Sbjct: 201 LEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWE-VDTCRGHYNNVSCAVFHP 259
Query: 104 ETSDELVVSGAGDAEVRLFNLSRFSG 129
EL++S + D +R++++S+ +G
Sbjct: 260 R--QELILSNSEDKSIRVWDMSKRTG 283
Score = 126 (49.4 bits), Expect = 9.5e-06, Sum P(2) = 9.5e-06
Identities = 30/92 (32%), Positives = 51/92 (55%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L GH + ++ + ++S SDD I VW++ SR + + TGH+ V C +F P
Sbjct: 89 LLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCV-CVLTGHNHYVMCAQFHP-- 145
Query: 106 SDELVVSGAGDAEVRLFNLSRFSGRGLDDNAI 137
S++LVVS + D VR++++S + L A+
Sbjct: 146 SEDLVVSASLDQTVRVWDISGLRKKNLSPGAV 177
Score = 67 (28.6 bits), Expect = 9.5e-06, Sum P(2) = 9.5e-06
Identities = 16/60 (26%), Positives = 28/60 (46%)
Query: 642 IASGSDDGRWFIWEKQTGRL--IKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIWTPS 699
I SG+DD + IW + + G V+C HP ++ ++ D +I++W S
Sbjct: 220 IVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMS 279
Score = 52 (23.4 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 13/45 (28%), Positives = 22/45 (48%)
Query: 658 TGRLIKMLL-GDEAVVNCVQCHPFDCVVATSGIDNTIKIWTPSAS 701
T ++K +L G + VN HP ++ + D +KIW + S
Sbjct: 193 TDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNES 237
>UNIPROTKB|H9KZL3 [details] [associations]
symbol:LOC100859596 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0005615 "extracellular space" evidence=IEA] [GO:0030157
"pancreatic juice secretion" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030126 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 EMBL:AADN02074020 EMBL:AADN02074019
Ensembl:ENSGALT00000014909 OMA:ENSVLLC Uniprot:H9KZL3
Length = 1169
Score = 127 (49.8 bits), Expect = 0.00042, P = 0.00042
Identities = 28/86 (32%), Positives = 49/86 (56%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIET--GHSANVFCTKFVP 103
LEGH VN +++ L++SG+DD + +W + K ++T GH NV C F P
Sbjct: 201 LEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWE-VDTCRGHYNNVSCAVFHP 259
Query: 104 ETSDELVVSGAGDAEVRLFNLSRFSG 129
EL++S + D +R++++S+ +G
Sbjct: 260 R--QELILSNSEDKSIRVWDMSKRTG 283
Score = 126 (49.4 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 30/92 (32%), Positives = 51/92 (55%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L GH + ++ + ++S SDD I VW++ SR + + TGH+ V C +F P
Sbjct: 89 LLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCV-CVLTGHNHYVMCAQFHP-- 145
Query: 106 SDELVVSGAGDAEVRLFNLSRFSGRGLDDNAI 137
S++LVVS + D VR++++S + L A+
Sbjct: 146 SEDLVVSASLDQTVRVWDISGLRKKNLSPGAV 177
Score = 67 (28.6 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 16/60 (26%), Positives = 28/60 (46%)
Query: 642 IASGSDDGRWFIWEKQTGRL--IKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIWTPS 699
I SG+DD + IW + + G V+C HP ++ ++ D +I++W S
Sbjct: 220 IVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMS 279
Score = 52 (23.4 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 13/45 (28%), Positives = 22/45 (48%)
Query: 658 TGRLIKMLL-GDEAVVNCVQCHPFDCVVATSGIDNTIKIWTPSAS 701
T ++K +L G + VN HP ++ + D +KIW + S
Sbjct: 193 TDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNES 237
>WB|WBGene00009542 [details] [associations]
symbol:F38E11.5 species:6239 "Caenorhabditis elegans"
[GO:0006886 "intracellular protein transport" evidence=IEA;IMP]
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0032940 "secretion by cell" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0048599 "oocyte development" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0006898 GO:GO:0006915
GO:GO:0006886 GO:GO:0002119 GO:GO:0032940 GO:GO:0030117
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005198
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0048599
HOGENOM:HOG000163444 InterPro:IPR016453 PIRSF:PIRSF005567
EMBL:Z68342 PIR:T21970 RefSeq:NP_501671.1 ProteinModelPortal:Q20168
SMR:Q20168 IntAct:Q20168 STRING:Q20168 PaxDb:Q20168 PRIDE:Q20168
EnsemblMetazoa:F38E11.5 GeneID:177779 KEGG:cel:CELE_F38E11.5
UCSC:F38E11.5 CTD:177779 WormBase:F38E11.5
GeneTree:ENSGT00640000091529 InParanoid:Q20168 OMA:LRNKAFG
NextBio:898348 GO:GO:0030663 Uniprot:Q20168
Length = 1000
Score = 106 (42.4 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 34/139 (24%), Positives = 67/139 (48%)
Query: 39 RLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFC 98
RL +R+L V + + + L++ + ++++W+Y ++ L+ S E V
Sbjct: 4 RLDVKRKLLARSDRVKCVDLHPVETWLLAALYNGNVHIWNYETQTLVKSFEVC-DVPVRA 62
Query: 99 TKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVG 158
KFVP S VV+G+ D +R+FN N + ++ H+ ++ L V
Sbjct: 63 AKFVPRKS--WVVTGSDDMHIRVFNY----------NTLERVHQFEAHSDYLRSLVVHPT 110
Query: 159 NPHVVWSASEDGTLRQHDF 177
P+V+ S+S+D ++ D+
Sbjct: 111 LPYVI-SSSDDMLVKMWDW 128
Score = 100 (40.3 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 34/132 (25%), Positives = 64/132 (48%)
Query: 53 VNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPETSDELVVS 112
V A + + S +++GSDD HI V++Y++ + +H E HS + V + V+S
Sbjct: 60 VRAAKFVPRKSWVVTGSDDMHIRVFNYNTLERVHQFEA-HSD--YLRSLVVHPTLPYVIS 116
Query: 113 GAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHVVWSASEDGTL 172
+ D V++++ DN ++ HT V ++A+ + + +AS D T+
Sbjct: 117 SSDDMLVKMWDW---------DNKWAMKQSFEGHTHYVMQIAINPKDNNTFATASLDKTV 167
Query: 173 RQHDFRQGSSCP 184
+ F GS+ P
Sbjct: 168 KVWQF--GSNVP 177
Score = 86 (35.3 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 20/61 (32%), Positives = 31/61 (50%)
Query: 636 GQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKI 695
G YI SG+DD IW+ Q ++ L G V+ V HP ++ T D+T+++
Sbjct: 196 GGEKPYIISGADDHLVKIWDYQNKTCVQTLDGHAQNVSSVCFHPELPLIITGSEDSTVRL 255
Query: 696 W 696
W
Sbjct: 256 W 256
Score = 75 (31.5 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 22/80 (27%), Positives = 37/80 (46%)
Query: 641 YIASGSDDGRWFIWEKQTGRLIKMLL-GDEAVVNCVQCHPFDC-VVATSGIDNTIKIWTP 698
Y+ S SDD +W+ +K G V + +P D AT+ +D T+K+W
Sbjct: 113 YVISSSDDMLVKMWDWDNKWAMKQSFEGHTHYVMQIAINPKDNNTFATASLDKTVKVWQF 172
Query: 699 SASVPSI-VSGGAAGPDTAD 717
++VP+ + G G + D
Sbjct: 173 GSNVPNFTLEGHEKGVNCVD 192
>ASPGD|ASPL0000038644 [details] [associations]
symbol:AN10391 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
ProteinModelPortal:C8VHX7 EnsemblFungi:CADANIAT00009734 OMA:LQHTLEG
Uniprot:C8VHX7
Length = 577
Score = 114 (45.2 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 37/136 (27%), Positives = 68/136 (50%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
LEGH+ V ++S++ LL S SDD + +W + L H++E GHS V F +
Sbjct: 292 LEGHEAAVLSVSYSHDSRLLASASDDRTVKIWDTETGSLQHTLE-GHSDLVRSVIF---S 347
Query: 106 SDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHVVWS 165
D +++ A D+ V++++ +G G + + + H V+ + + ++ S
Sbjct: 348 HDSRLLASASDSTVKIWD----TGTGSLQHTL------EGHRDWVRSVIFS-HDSQLLAS 396
Query: 166 ASEDGTLRQHDFRQGS 181
AS+D T++ D GS
Sbjct: 397 ASDDSTVKIWDTGTGS 412
Score = 97 (39.2 bits), Expect = 0.00086, Sum P(2) = 0.00086
Identities = 36/141 (25%), Positives = 68/141 (48%)
Query: 41 SQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTK 100
S + LEGH V ++ ++ LL S SD T + +W + L H++E GH V
Sbjct: 329 SLQHTLEGHSDLVRSVIFSHDSRLLASASDST-VKIWDTGTGSLQHTLE-GHRDWVRSVI 386
Query: 101 FVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNP 160
F ++ +L+ S + D+ V++++ +G G + + + H V+ + +
Sbjct: 387 FSHDS--QLLASASDDSTVKIWD----TGTGSLQHTL------EGHRDWVRSVIFS-HDS 433
Query: 161 HVVWSASEDGTLRQHDFRQGS 181
++ SAS+D T++ D GS
Sbjct: 434 QLLASASDDSTVKIWDTGTGS 454
Score = 72 (30.4 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 19/55 (34%), Positives = 27/55 (49%)
Query: 642 IASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW 696
+AS SDD IW+ TG L L G V V ++A++ D T++IW
Sbjct: 436 LASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSRLLASASDDRTVRIW 490
Score = 71 (30.1 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 17/55 (30%), Positives = 28/55 (50%)
Query: 642 IASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW 696
+AS SDD IW+ + G L G ++V V ++A++ D T++IW
Sbjct: 478 LASASDDRTVRIWDTEKGSHKHTLEGHSSLVTSVSFSHDSRLLASASNDQTVRIW 532
>UNIPROTKB|F1PU93 [details] [associations]
symbol:COPA "Coatomer subunit alpha" species:9615 "Canis
lupus familiaris" [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030126 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 OMA:FWVLGAH EMBL:AAEX03018465
EMBL:AAEX03018466 Ensembl:ENSCAFT00000019919 Uniprot:F1PU93
Length = 1214
Score = 127 (49.8 bits), Expect = 0.00044, P = 0.00044
Identities = 28/86 (32%), Positives = 49/86 (56%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIET--GHSANVFCTKFVP 103
LEGH VN +++ L++SG+DD + +W + K ++T GH NV C F P
Sbjct: 191 LEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWE-VDTCRGHYNNVSCAVFHP 249
Query: 104 ETSDELVVSGAGDAEVRLFNLSRFSG 129
EL++S + D +R++++S+ +G
Sbjct: 250 R--QELILSNSEDKSIRVWDMSKRTG 273
Score = 126 (49.4 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 30/92 (32%), Positives = 51/92 (55%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L GH + ++ + ++S SDD I VW++ SR + + TGH+ V C +F P
Sbjct: 79 LLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCV-CVLTGHNHYVMCAQFHP-- 135
Query: 106 SDELVVSGAGDAEVRLFNLSRFSGRGLDDNAI 137
S++LVVS + D VR++++S + L A+
Sbjct: 136 SEDLVVSASLDQTVRVWDISGLRKKNLSPGAV 167
Score = 67 (28.6 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 16/60 (26%), Positives = 28/60 (46%)
Query: 642 IASGSDDGRWFIWEKQTGRL--IKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIWTPS 699
I SG+DD + IW + + G V+C HP ++ ++ D +I++W S
Sbjct: 210 IVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMS 269
Score = 52 (23.4 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 13/45 (28%), Positives = 22/45 (48%)
Query: 658 TGRLIKMLL-GDEAVVNCVQCHPFDCVVATSGIDNTIKIWTPSAS 701
T ++K +L G + VN HP ++ + D +KIW + S
Sbjct: 183 TDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNES 227
>RGD|628746 [details] [associations]
symbol:Copb2 "coatomer protein complex, subunit beta 2 (beta
prime)" species:10116 "Rattus norvegicus" [GO:0000139 "Golgi
membrane" evidence=IDA] [GO:0005080 "protein kinase C binding"
evidence=IPI] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005794 "Golgi apparatus"
evidence=ISO;IDA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006891 "intra-Golgi vesicle-mediated transport"
evidence=ISO] [GO:0015629 "actin cytoskeleton" evidence=ISO]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0030126 "COPI vesicle coat"
evidence=ISO] [GO:0030663 "COPI-coated vesicle membrane"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 RGD:628746
GO:GO:0006886 GO:GO:0000139 GO:GO:0030117 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005198
InterPro:IPR020472 PRINTS:PR00320 CTD:9276 HOVERGEN:HBG051076
InterPro:IPR016453 PIRSF:PIRSF005567 GO:GO:0030663 EMBL:AF002705
IPI:IPI00231953 RefSeq:NP_068533.1 UniGene:Rn.37178
ProteinModelPortal:O35142 IntAct:O35142 PRIDE:O35142 GeneID:60384
KEGG:rno:60384 NextBio:612083 Genevestigator:O35142 Uniprot:O35142
Length = 905
Score = 145 (56.1 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 31/84 (36%), Positives = 50/84 (59%)
Query: 46 LEGHQGCVNAISWNSKGS--LLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVP 103
LEGH+ VN I + S G LISG+DD + +W Y ++ + + E GH+ NV C F P
Sbjct: 181 LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTPE-GHAQNVSCATFHP 239
Query: 104 ETSDELVVSGAGDAEVRLFNLSRF 127
E ++++G+ D VR+++ S +
Sbjct: 240 ELP--IIITGSEDGTVRIWHSSTY 261
Score = 92 (37.4 bits), Expect = 9.8e-05, Sum P(2) = 9.8e-05
Identities = 40/197 (20%), Positives = 88/197 (44%)
Query: 39 RLSQERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFC 98
RL +R+L V ++ + +++ + + VW++ ++ L+ + E V
Sbjct: 4 RLDIKRKLTAMSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVC-DLPVRA 62
Query: 99 TKFVPETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVG 158
KFV + VV+GA D ++R+FN N + +++ H+ ++ +AV
Sbjct: 63 AKFVARKN--WVVTGADDMQIRVFNY----------NTLERVHMFEAHSDYIRCIAVHPT 110
Query: 159 NPHVVWSASEDGTLRQHDFRQGSSCPPAGSSHQE-CRNILLDLRCGAKRSLADPPKQTLS 217
P ++ S S+D ++ D+ + SC H I+++ + + + A + +
Sbjct: 111 QPFILTS-SDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDR---T 166
Query: 218 LKSCDISSTRPHLLLVG 234
+K + S+ P+ L G
Sbjct: 167 IKVWQLGSSSPNFTLEG 183
Score = 90 (36.7 bits), Expect = 9.8e-05, Sum P(2) = 9.8e-05
Identities = 21/63 (33%), Positives = 31/63 (49%)
Query: 639 GD--YIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW 696
GD Y+ SG+DD IW+ Q ++ G V+C HP ++ T D T++IW
Sbjct: 197 GDKPYLISGADDRLVKIWDYQNKTCVQTPEGHAQNVSCATFHPELPIIITGSEDGTVRIW 256
Query: 697 TPS 699
S
Sbjct: 257 HSS 259
Score = 46 (21.3 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 8/35 (22%), Positives = 19/35 (54%)
Query: 269 PMHLSEHGRSSLHLTHVTFSPNGEEVLLSYSGEHV 303
P+ + + G ++ + +PNG V++ GE++
Sbjct: 342 PLAVKDMGSCEIYPQTIQHNPNGRFVVVCGDGEYI 376
Score = 42 (19.8 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 416 KRKWKNDAQMAIRDC 430
++KWK A++AI C
Sbjct: 667 EQKWKQLAELAISKC 681
Score = 37 (18.1 bits), Expect = 3.5e-05, Sum P(3) = 3.5e-05
Identities = 13/44 (29%), Positives = 24/44 (54%)
Query: 356 VATGLGKCRMLVEIARNSLEEGKH-----PYY--G-IEACNEVL 391
+AT G M+ ++A + +GK+ Y+ G ++AC E+L
Sbjct: 702 LATASGNASMVNKLAEGAERDGKNNVAFMSYFLQGKLDACLELL 745
>SGD|S000000668 [details] [associations]
symbol:RSA4 "WD-repeat protein involved in ribosome
biogenesis" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005840 "ribosome" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000027 "ribosomal large
subunit assembly" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000000668 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GeneTree:ENSGT00690000102167 GO:GO:0000027 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 OrthoDB:EOG4PP1R9 EMBL:AY692666
PIR:S19487 RefSeq:NP_009997.2 ProteinModelPortal:P25382 SMR:P25382
DIP:DIP-5365N IntAct:P25382 MINT:MINT-531710 STRING:P25382
PaxDb:P25382 PeptideAtlas:P25382 EnsemblFungi:YCR072C GeneID:850435
KEGG:sce:YCR072C CYGD:YCR072c NextBio:966027 Genevestigator:P25382
GermOnline:YCR072C Uniprot:P25382
Length = 515
Score = 103 (41.3 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 42/154 (27%), Positives = 64/154 (41%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L+GH V +SW+ G ++ +GS D I +W S + L GHS + + P
Sbjct: 182 LKGHYNWVLCVSWSPDGEVIATGSMDNTIRLWDPKSGQCLGDALRGHSKWITSLSWEPI- 240
Query: 106 SDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQC--HTRRVKKLAVEVGNPHVV 163
LV G+ + RL + S+ + D ++ Y HT V V+ G ++
Sbjct: 241 --HLVKPGS---KPRLASSSKDGTIKIWDT-VSRVCQYTMSGHTNSVS--CVKWGGQGLL 292
Query: 164 WSASEDGTLRQHDFRQGSSCPPAGSSHQECRNIL 197
+S S D T+R D C SH N L
Sbjct: 293 YSGSHDRTVRVWDINSQGRCINILKSHAHWVNHL 326
Score = 89 (36.4 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 31/120 (25%), Positives = 64/120 (53%)
Query: 63 SLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPETSDELVVSGAGDAEVRLF 122
S +++G+ D +W ++ +H+++ GH V C + P+ E++ +G+ D +RL+
Sbjct: 157 SRMVTGAGDNTARIWDCDTQTPMHTLK-GHYNWVLCVSWSPD--GEVIATGSMDNTIRLW 213
Query: 123 NLSRFSGRGLDDNAITPSALYQCHTRRVKKLA------VEVGNPHVVWSASEDGTLRQHD 176
+ SG+ L D AL + H++ + L+ V+ G+ + S+S+DGT++ D
Sbjct: 214 DPK--SGQCLGD------AL-RGHSKWITSLSWEPIHLVKPGSKPRLASSSKDGTIKIWD 264
Score = 82 (33.9 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 19/63 (30%), Positives = 32/63 (50%)
Query: 636 GQRGDYIASGSDDGRWFIWE--KQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTI 693
G + + + SDD F+W K T + +M G + +VN V P + ++ DN+I
Sbjct: 368 GNSEEMMVTASDDYTMFLWNPLKSTKPIARMT-GHQKLVNHVAFSPDGRYIVSASFDNSI 426
Query: 694 KIW 696
K+W
Sbjct: 427 KLW 429
Score = 73 (30.8 bits), Expect = 9.3e-05, Sum P(2) = 9.3e-05
Identities = 23/80 (28%), Positives = 35/80 (43%)
Query: 618 RYVGHCNVGTDIKQASFLGQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQC 677
R GH + + +F G YI S S D +W+ + G+ I G A V V
Sbjct: 397 RMTGHQKL---VNHVAF-SPDGRYIVSASFDNSIKLWDGRDGKFISTFRGHVASVYQVAW 452
Query: 678 HPFDC-VVATSGIDNTIKIW 696
DC ++ + D T+K+W
Sbjct: 453 SS-DCRLLVSCSKDTTLKVW 471
>UNIPROTKB|Q27954 [details] [associations]
symbol:COPA "Coatomer subunit alpha" species:9913 "Bos
taurus" [GO:0005515 "protein binding" evidence=IPI] [GO:0006890
"retrograde vesicle-mediated transport, Golgi to ER" evidence=TAS]
[GO:0030126 "COPI vesicle coat" evidence=IDA] [GO:0006891
"intra-Golgi vesicle-mediated transport" evidence=TAS] [GO:0030157
"pancreatic juice secretion" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005179 "hormone activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006886 GO:GO:0005615
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030157 GO:GO:0006891 GO:GO:0030126
GO:GO:0006890 HOGENOM:HOG000195913 KO:K05236 InterPro:IPR016391
PIRSF:PIRSF003354 EMBL:X96768 EMBL:BC153251 IPI:IPI00904110
RefSeq:NP_001099115.1 UniGene:Bt.76408 PDB:3MKR PDBsum:3MKR
ProteinModelPortal:Q27954 IntAct:Q27954 STRING:Q27954 PRIDE:Q27954
Ensembl:ENSBTAT00000005672 GeneID:100126041 KEGG:bta:100126041
CTD:1314 GeneTree:ENSGT00600000084501 HOVERGEN:HBG005379
EvolutionaryTrace:Q27954 NextBio:20788926 Uniprot:Q27954
Length = 1224
Score = 127 (49.8 bits), Expect = 0.00045, P = 0.00045
Identities = 28/86 (32%), Positives = 49/86 (56%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIET--GHSANVFCTKFVP 103
LEGH VN +++ L++SG+DD + +W + K ++T GH NV C F P
Sbjct: 201 LEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWE-VDTCRGHYNNVSCAVFHP 259
Query: 104 ETSDELVVSGAGDAEVRLFNLSRFSG 129
EL++S + D +R++++S+ +G
Sbjct: 260 R--QELILSNSEDKSIRVWDMSKRTG 283
Score = 126 (49.4 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 30/92 (32%), Positives = 51/92 (55%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L GH + ++ + ++S SDD I VW++ SR + + TGH+ V C +F P
Sbjct: 89 LLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCV-CVLTGHNHYVMCAQFHP-- 145
Query: 106 SDELVVSGAGDAEVRLFNLSRFSGRGLDDNAI 137
S++LVVS + D VR++++S + L A+
Sbjct: 146 SEDLVVSASLDQTVRVWDISGLRKKNLSPGAV 177
Score = 67 (28.6 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 16/60 (26%), Positives = 28/60 (46%)
Query: 642 IASGSDDGRWFIWEKQTGRL--IKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIWTPS 699
I SG+DD + IW + + G V+C HP ++ ++ D +I++W S
Sbjct: 220 IVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMS 279
Score = 52 (23.4 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 13/45 (28%), Positives = 22/45 (48%)
Query: 658 TGRLIKMLL-GDEAVVNCVQCHPFDCVVATSGIDNTIKIWTPSAS 701
T ++K +L G + VN HP ++ + D +KIW + S
Sbjct: 193 TDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNES 237
>UNIPROTKB|F1RJX8 [details] [associations]
symbol:COPA "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030157 "pancreatic juice secretion" evidence=IEA]
[GO:0005615 "extracellular space" evidence=IEA] [GO:0030126 "COPI
vesicle coat" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006886 GO:GO:0005615
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030157 GO:GO:0030126 KO:K05236 InterPro:IPR016391
PIRSF:PIRSF003354 CTD:1314 GeneTree:ENSGT00600000084501 OMA:FWVLGAH
EMBL:CU207285 RefSeq:XP_001928742.1 UniGene:Ssc.96897
Ensembl:ENSSSCT00000006999 GeneID:100157296 KEGG:ssc:100157296
Uniprot:F1RJX8
Length = 1224
Score = 127 (49.8 bits), Expect = 0.00045, P = 0.00045
Identities = 28/86 (32%), Positives = 49/86 (56%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIET--GHSANVFCTKFVP 103
LEGH VN +++ L++SG+DD + +W + K ++T GH NV C F P
Sbjct: 201 LEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWE-VDTCRGHYNNVSCAVFHP 259
Query: 104 ETSDELVVSGAGDAEVRLFNLSRFSG 129
EL++S + D +R++++S+ +G
Sbjct: 260 R--QELILSNSEDKSIRVWDMSKRTG 283
Score = 126 (49.4 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 30/92 (32%), Positives = 51/92 (55%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L GH + ++ + ++S SDD I VW++ SR + + TGH+ V C +F P
Sbjct: 89 LLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCV-CVLTGHNHYVMCAQFHP-- 145
Query: 106 SDELVVSGAGDAEVRLFNLSRFSGRGLDDNAI 137
S++LVVS + D VR++++S + L A+
Sbjct: 146 SEDLVVSASLDQTVRVWDISGLRKKNLSPGAV 177
Score = 67 (28.6 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 16/60 (26%), Positives = 28/60 (46%)
Query: 642 IASGSDDGRWFIWEKQTGRL--IKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIWTPS 699
I SG+DD + IW + + G V+C HP ++ ++ D +I++W S
Sbjct: 220 IVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMS 279
Score = 52 (23.4 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 13/45 (28%), Positives = 22/45 (48%)
Query: 658 TGRLIKMLL-GDEAVVNCVQCHPFDCVVATSGIDNTIKIWTPSAS 701
T ++K +L G + VN HP ++ + D +KIW + S
Sbjct: 193 TDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNES 237
>MGI|MGI:1334462 [details] [associations]
symbol:Copa "coatomer protein complex subunit alpha"
species:10090 "Mus musculus" [GO:0005179 "hormone activity"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005615 "extracellular space" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030126
"COPI vesicle coat" evidence=ISO] [GO:0030157 "pancreatic juice
secretion" evidence=ISO] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1334462 GO:GO:0006886
GO:GO:0005615 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030157 GO:GO:0030126
HSSP:P63005 HOGENOM:HOG000195913 KO:K05236 InterPro:IPR016391
PIRSF:PIRSF003354 CTD:1314 GeneTree:ENSGT00600000084501
HOVERGEN:HBG005379 ChiTaRS:COPA EMBL:AC158930 EMBL:BC024070
EMBL:BC047429 IPI:IPI00229834 RefSeq:NP_034068.3 UniGene:Mm.30041
ProteinModelPortal:Q8CIE6 SMR:Q8CIE6 IntAct:Q8CIE6 STRING:Q8CIE6
PhosphoSite:Q8CIE6 PaxDb:Q8CIE6 PRIDE:Q8CIE6
Ensembl:ENSMUST00000135192 GeneID:12847 KEGG:mmu:12847
UCSC:uc007dpn.2 InParanoid:Q8CIE6 NextBio:282392 Bgee:Q8CIE6
Genevestigator:Q8CIE6 Uniprot:Q8CIE6
Length = 1224
Score = 127 (49.8 bits), Expect = 0.00045, P = 0.00045
Identities = 28/86 (32%), Positives = 49/86 (56%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIET--GHSANVFCTKFVP 103
LEGH VN +++ L++SG+DD + +W + K ++T GH NV C F P
Sbjct: 201 LEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWE-VDTCRGHYNNVSCAVFHP 259
Query: 104 ETSDELVVSGAGDAEVRLFNLSRFSG 129
EL++S + D +R++++S+ +G
Sbjct: 260 R--QELILSNSEDKSIRVWDMSKRTG 283
Score = 126 (49.4 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 30/92 (32%), Positives = 51/92 (55%)
Query: 46 LEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPET 105
L GH + ++ + ++S SDD I VW++ SR + + TGH+ V C +F P
Sbjct: 89 LLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCV-CVLTGHNHYVMCAQFHP-- 145
Query: 106 SDELVVSGAGDAEVRLFNLSRFSGRGLDDNAI 137
S++LVVS + D VR++++S + L A+
Sbjct: 146 SEDLVVSASLDQTVRVWDISGLRKKNLSPGAV 177
Score = 67 (28.6 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 16/60 (26%), Positives = 28/60 (46%)
Query: 642 IASGSDDGRWFIWEKQTGRL--IKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIWTPS 699
I SG+DD + IW + + G V+C HP ++ ++ D +I++W S
Sbjct: 220 IVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMS 279
Score = 52 (23.4 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 13/45 (28%), Positives = 22/45 (48%)
Query: 658 TGRLIKMLL-GDEAVVNCVQCHPFDCVVATSGIDNTIKIWTPSAS 701
T ++K +L G + VN HP ++ + D +KIW + S
Sbjct: 193 TDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNES 237
>UNIPROTKB|A5PKH9 [details] [associations]
symbol:WDR51B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042384 "cilium assembly" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OMA:TASWDTF EMBL:DAAA02012678
EMBL:BC142494 IPI:IPI00690736 RefSeq:NP_001092501.1
UniGene:Bt.54889 Ensembl:ENSBTAT00000000919 GeneID:525136
KEGG:bta:525136 InParanoid:A5PKH9 NextBio:20874107 Uniprot:A5PKH9
Length = 478
Score = 105 (42.0 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 23/79 (29%), Positives = 44/79 (55%)
Query: 45 ELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPE 104
E + H V ++ +++ G L S S+D I VW+ ++ L+S+ H+ V C KF P+
Sbjct: 97 EFKAHTAPVRSVDFSADGQFLASASEDKSIKVWNMYRQRFLYSLYR-HTHWVRCAKFSPD 155
Query: 105 TSDELVVSGAGDAEVRLFN 123
L+VS + D +++++
Sbjct: 156 --GRLIVSCSEDKTIKIWD 172
Score = 94 (38.1 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 34/138 (24%), Positives = 63/138 (45%)
Query: 43 ERELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFV 102
ER +GH+ + ++ ++ G L +GS DT + +WS + GH + +F
Sbjct: 11 ERYFKGHKAAITSVDFSPNGKQLATGSWDTFLMLWSLRPQARAFRY-VGHKDVITSVQFS 69
Query: 103 PETSDELVVSGAGDAEVRLFNLSRFSGRGLDDNAITPSALYQCHTRRVKKLAVEVGNPHV 162
P L+ S + D +RL+ + RG S+ ++ HT V+ + +
Sbjct: 70 P--LGNLLASASRDRTIRLWIPDK---RG-------KSSEFKAHTAPVRSVDFSADGQFL 117
Query: 163 VWSASEDGTLRQHD-FRQ 179
SASED +++ + +RQ
Sbjct: 118 A-SASEDKSIKVWNMYRQ 134
Score = 79 (32.9 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 19/57 (33%), Positives = 27/57 (47%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKI 695
G IAS D IW+ + +L++ VNCV HP + T+ D T+KI
Sbjct: 198 GTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYLITASSDGTLKI 254
>UNIPROTKB|Q8TC44 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005813 "centrosome" evidence=IDA]
[GO:0005814 "centriole" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0005932 "microtubule basal body" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
UniGene:Hs.25130 HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743
CTD:282809 OrthoDB:EOG41VK2R EMBL:BC026080 EMBL:AK074772
IPI:IPI00152269 RefSeq:NP_758440.1 UniGene:Hs.604487
ProteinModelPortal:Q8TC44 SMR:Q8TC44 IntAct:Q8TC44 STRING:Q8TC44
PhosphoSite:Q8TC44 DMDM:74762610 PRIDE:Q8TC44 DNASU:282809
Ensembl:ENST00000313546 GeneID:282809 KEGG:hsa:282809
UCSC:uc001tba.3 GeneCards:GC12M089814 HGNC:HGNC:30836 HPA:HPA038841
MIM:614784 neXtProt:NX_Q8TC44 PharmGKB:PA165513299
InParanoid:Q8TC44 OMA:TASWDTF PhylomeDB:Q8TC44 ChiTaRS:POC1B
GenomeRNAi:282809 NextBio:93521 ArrayExpress:Q8TC44 Bgee:Q8TC44
CleanEx:HS_WDR51B Genevestigator:Q8TC44 GermOnline:ENSG00000139323
Uniprot:Q8TC44
Length = 478
Score = 105 (42.0 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 23/79 (29%), Positives = 44/79 (55%)
Query: 45 ELEGHQGCVNAISWNSKGSLLISGSDDTHINVWSYSSRKLLHSIETGHSANVFCTKFVPE 104
E + H V ++ +++ G L + S+D I VWS ++ L+S+ H+ V C KF P+
Sbjct: 97 EFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYR-HTHWVRCAKFSPD 155
Query: 105 TSDELVVSGAGDAEVRLFN 123
L+VS + D +++++
Sbjct: 156 --GRLIVSCSEDKTIKIWD 172
Score = 79 (32.9 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 20/74 (27%), Positives = 33/74 (44%)
Query: 624 NVGTDIKQASFL--GQRGDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFD 681
N + A+F+ G IAS D +W+ + +L++ VNC+ HP
Sbjct: 181 NFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSG 240
Query: 682 CVVATSGIDNTIKI 695
+ T+ D T+KI
Sbjct: 241 NYLITASSDGTLKI 254
Score = 66 (28.3 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 18/58 (31%), Positives = 26/58 (44%)
Query: 639 GDYIASGSDDGRWFIWEKQTGRLIKMLLGDEAVVNCVQCHPFDCVVATSGIDNTIKIW 696
G+Y+ + S DG I + GRLI L G V V + A+ G D + +W
Sbjct: 240 GNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLW 297
WARNING: HSPs involving 294 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.134 0.406 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 763 725 0.00086 121 3 11 22 0.40 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 544
No. of states in DFA: 624 (66 KB)
Total size of DFA: 407 KB (2196 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 59.47u 0.09s 59.56t Elapsed: 00:00:05
Total cpu time: 59.53u 0.09s 59.62t Elapsed: 00:00:05
Start: Mon May 20 23:17:59 2013 End: Mon May 20 23:18:04 2013
WARNINGS ISSUED: 2